BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= gi|254780875|ref|YP_003065288.1| protoporphyrinogen oxidase (methyltransferase) protein [Candidatus Liberibacter asiaticus str. psy62] (264 letters) Database: nr 14,124,377 sequences; 4,842,793,630 total letters Searching..................................................done Results from round 1 >gi|254780875|ref|YP_003065288.1| protoporphyrinogen oxidase (methyltransferase) protein [Candidatus Liberibacter asiaticus str. psy62] gi|254040552|gb|ACT57348.1| protoporphyrinogen oxidase (methyltransferase) protein [Candidatus Liberibacter asiaticus str. psy62] Length = 264 Score = 532 bits (1370), Expect = e-149, Method: Compositional matrix adjust. Identities = 264/264 (100%), Positives = 264/264 (100%) Query: 1 MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60 MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF Sbjct: 1 MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60 Query: 61 YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120 YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP Sbjct: 61 YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV Sbjct: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE Sbjct: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 Query: 241 SRKLFLVNAFKDYGGNDRVLLFCR 264 SRKLFLVNAFKDYGGNDRVLLFCR Sbjct: 241 SRKLFLVNAFKDYGGNDRVLLFCR 264 >gi|315122703|ref|YP_004063192.1| protoporphyrinogen oxidase (methyltransferase) protein [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313496105|gb|ADR52704.1| protoporphyrinogen oxidase (methyltransferase) protein [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 293 Score = 397 bits (1020), Expect = e-109, Method: Compositional matrix adjust. Identities = 189/264 (71%), Positives = 222/264 (84%) Query: 1 MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60 +Q LR+ SFLC VTGLSS QVI PD++LDD QR L A++RSL +ESIHRI GWRDF Sbjct: 30 LQGLRNPRSFLCGVTGLSSCQVIACPDTILDDEQRLLLKKAVIRSLNYESIHRICGWRDF 89 Query: 61 YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120 YNVRL LSSDTFEPRPETELLVDS L+F L + K+ RILDLG G+GA+CLALLKE+ Sbjct: 90 YNVRLALSSDTFEPRPETELLVDSILSFFLSQRGKKKDARILDLGMGSGAICLALLKENS 149 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180 FF+G+GVDIS KALEIA+ NAV NG+S+RF LQS+WFSS+EG FD+IVSNPPYIES +V Sbjct: 150 FFEGLGVDISSKALEIARKNAVANGLSKRFSALQSNWFSSIEGFFDIIVSNPPYIESAVV 209 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 D LG EV++FDP I+LDGG DGLSHYR IADGVSRHL+K+G C +EIGYNQK+DV+RIFE Sbjct: 210 DKLGPEVKNFDPVIALDGGPDGLSHYRVIADGVSRHLSKNGFCGLEIGYNQKIDVIRIFE 269 Query: 241 SRKLFLVNAFKDYGGNDRVLLFCR 264 +KLFLVN+FKDY NDR+LLFCR Sbjct: 270 DKKLFLVNSFKDYEKNDRILLFCR 293 >gi|332716893|ref|YP_004444359.1| protoporphyrinogen oxidase protein [Agrobacterium sp. H13-3] gi|325063578|gb|ADY67268.1| protoporphyrinogen oxidase protein [Agrobacterium sp. H13-3] Length = 289 Score = 249 bits (637), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 129/261 (49%), Positives = 167/261 (63%) Query: 4 LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63 L D+ + VTG S ++ PD + + + + R E +HRILG R+F+ + Sbjct: 29 LLDARLLVADVTGFSLTDFVMKPDHPVTREESARIAAMVERRAGGEPVHRILGHREFHGL 88 Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 L LS++T EPRP+TE+LVD+ L + + RILDLGTGTGA+CLALLKE P Sbjct: 89 DLLLSTETLEPRPDTEVLVDTLLPALKKIVADKGSARILDLGTGTGAICLALLKECPEAT 148 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183 GVG DIS ALE A NA NG++ RF+T++SDWF + G FD+IVSNPPYI S IV L Sbjct: 149 GVGSDISADALETAAKNAARNGLASRFETMRSDWFKKISGRFDIIVSNPPYIRSDIVTTL 208 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 EVR DP +LDGG DGL+ YR IA R L ++G+ VEIG++Q++DV IF S Sbjct: 209 DREVRHHDPMAALDGGQDGLAPYRLIAADAGRFLVENGIVGVEIGFDQRLDVSAIFASHG 268 Query: 244 LFLVNAFKDYGGNDRVLLFCR 264 L++A KDYGGNDRVL F R Sbjct: 269 FSLLDAVKDYGGNDRVLTFRR 289 >gi|222087302|ref|YP_002545839.1| protoporphyrinogen oxidase (methyltransferase) protein [Agrobacterium radiobacter K84] gi|221724750|gb|ACM27906.1| protoporphyrinogen oxidase (methyltransferase) protein [Agrobacterium radiobacter K84] Length = 291 Score = 244 bits (623), Expect = 9e-63, Method: Compositional matrix adjust. Identities = 113/217 (52%), Positives = 150/217 (69%) Query: 46 LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLG 105 L HE +HRILG R+FY + + LS T EPRP+TE+LVD+ L + + +LD+G Sbjct: 71 LNHEPVHRILGEREFYGLPMALSPATLEPRPDTEILVDTVLPHARRLATDHGTIHLLDMG 130 Query: 106 TGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF 165 TGTGA+CLALL E G+G DIS +ALE A++NA NG++ RFDT+Q WF ++ G F Sbjct: 131 TGTGAICLALLHECQQAMGIGSDISGEALETARANAARNGLAARFDTVQGSWFEAIHGRF 190 Query: 166 DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225 VIVSNPPYIES ++ L EV++FDP +LDGG+DGL YR IA +R L++DG+ V Sbjct: 191 HVIVSNPPYIESSVISTLAPEVKNFDPPAALDGGLDGLDAYRAIAKDAARFLHQDGIVGV 250 Query: 226 EIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262 EIGY+Q+ V +FE FL+ A +DYG NDRVL+F Sbjct: 251 EIGYDQRKTVTSVFEGAGFFLIEAARDYGHNDRVLVF 287 >gi|15890802|ref|NP_356474.1| protoporphyrinogen oxidase [Agrobacterium tumefaciens str. C58] gi|15159087|gb|AAK89259.1| protoporphyrinogen oxidase [Agrobacterium tumefaciens str. C58] Length = 289 Score = 243 bits (621), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 125/261 (47%), Positives = 166/261 (63%) Query: 4 LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63 L D+ + VTG S ++ P+ + + + I R + E +HRILG R+F+ + Sbjct: 29 LVDARLLIADVTGFSLTDFVMKPEHPVTQDESARIAAMIERRAEGEPVHRILGHREFHGL 88 Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 L LS +T EPRP+TE+LVD+ L + ++ RILDLGTGTGA+CLALLKE Sbjct: 89 DLLLSKETLEPRPDTEVLVDTLLPALKEAVSRKGSARILDLGTGTGAICLALLKECAQAS 148 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183 G+G DIS ALE A NA NG+ RF+T++S+WF + G FD+IVSNPPYI + IV L Sbjct: 149 GIGSDISADALETAAKNAARNGLDSRFETIRSNWFEKISGRFDIIVSNPPYIRTDIVATL 208 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 EVR+ DP +LDGG DGL+ YR IA R L ++G VEIG++Q++DV IF S Sbjct: 209 DPEVRNHDPMAALDGGQDGLAPYRLIAADAGRFLVENGTVGVEIGFDQRLDVSAIFASHG 268 Query: 244 LFLVNAFKDYGGNDRVLLFCR 264 L++A KDYGGNDRVL F R Sbjct: 269 FSLLDAVKDYGGNDRVLTFRR 289 >gi|209551099|ref|YP_002283016.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209536855|gb|ACI56790.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 286 Score = 241 bits (616), Expect = 6e-62, Method: Compositional matrix adjust. Identities = 122/258 (47%), Positives = 164/258 (63%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ + + LS +++ L Q L+ A+ R L HE +HRILG R+FY + L Sbjct: 27 DARLLVAGLLKLSPTELLTRSAERLSPEQAEVLSKAVERRLGHEPVHRILGEREFYGLPL 86 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 LS++T EPRP+TE+LVD+ LA +++ + ILD+GTGTGA+CLALL E P GV Sbjct: 87 ALSAETLEPRPDTEILVDTVLACLKDLAKEQSHLHILDVGTGTGAICLALLSECPDASGV 146 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185 G DIS AL A+SNA NG+ +RF +QS WF S++G F IVSNPPYI S ++ L Sbjct: 147 GSDISADALRTARSNAERNGLQDRFQAVQSRWFESIQGSFHAIVSNPPYIASNVIHDLAP 206 Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245 EV FDP +LDGG DGL YR IA +R + DG+ +EIGY+Q+ DV IFE++ Sbjct: 207 EVTKFDPVAALDGGPDGLDAYRAIAKDAARFMRPDGVVGLEIGYDQRNDVTAIFEAKGFK 266 Query: 246 LVNAFKDYGGNDRVLLFC 263 + + KDYG NDRVL+F Sbjct: 267 CLKSVKDYGQNDRVLVFA 284 >gi|116254018|ref|YP_769856.1| protein methyltransferase [Rhizobium leguminosarum bv. viciae 3841] gi|115258666|emb|CAK09770.1| putative protein methyltransferase [Rhizobium leguminosarum bv. viciae 3841] Length = 286 Score = 237 bits (605), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 120/260 (46%), Positives = 167/260 (64%), Gaps = 4/260 (1%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ + + LS ++++ L Q + A+ R L HE +HRILG R+FY + L Sbjct: 27 DARLLVAGLLKLSPTELLMRSAERLSPEQAKVIFKALERRLGHEPVHRILGEREFYGLPL 86 Query: 66 TLSSDTFEPRPETELLVDSALAF--SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 LS++T EPRP+TE+LVD+ L + L +++ R + ILD+GTGTGA+CLALL E P Sbjct: 87 RLSAETLEPRPDTEILVDTVLVYLKDLAKVQNR--LHILDMGTGTGAICLALLSECPDAS 144 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183 GVG DIS AL A+SNA NG+ +RF+ +QS+WF ++G F IVSNPPYI S ++ L Sbjct: 145 GVGSDISADALLTARSNAERNGLQDRFEAVQSNWFEDIQGSFHAIVSNPPYIASNVIHDL 204 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 EV FDP +LDGG DGL Y+ IA +R + DG+ +EIGY+Q+ DV IFE++ Sbjct: 205 APEVTKFDPAAALDGGPDGLDAYKAIAKDAARFIRPDGVVGLEIGYDQRNDVTAIFEAKG 264 Query: 244 LFLVNAFKDYGGNDRVLLFC 263 + + KDYG NDRVL+F Sbjct: 265 FRCLKSVKDYGQNDRVLVFA 284 >gi|260467161|ref|ZP_05813339.1| modification methylase, HemK family [Mesorhizobium opportunistum WSM2075] gi|259029085|gb|EEW30383.1| modification methylase, HemK family [Mesorhizobium opportunistum WSM2075] Length = 292 Score = 236 bits (601), Expect = 3e-60, Method: Compositional matrix adjust. Identities = 123/259 (47%), Positives = 158/259 (61%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ + +G + Q I DP+ + R + A+ R E +HRILG+R+FY +RL Sbjct: 31 DARLIVEHFSGTTRTQAIADPEFKVHGRAIETIDAALRRRAGGEPVHRILGYREFYGLRL 90 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 +LS +T EPRP+TE LV++ L F + RILDLGTGTGA+ LALL P Sbjct: 91 SLSPETLEPRPDTETLVEAILPFVKAIAAREGACRILDLGTGTGAIALALLSAEPAATAT 150 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185 GVDI+ AL A NA G+ RF LQSDWF V G + VI +NPPYI S + L Sbjct: 151 GVDIAPGALATATGNAGQLGLGGRFTALQSDWFEKVSGRYHVIAANPPYIPSQDIGNLQD 210 Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245 EVRDFDPR++LDGG+DGL+ YR IA +R L +G +VEIG Q+ +V IF S Sbjct: 211 EVRDFDPRLALDGGVDGLNPYRIIAAEAARFLEAEGRVAVEIGRTQQDEVTDIFRSAGYG 270 Query: 246 LVNAFKDYGGNDRVLLFCR 264 LV AF+D GGNDRVL+F R Sbjct: 271 LVGAFRDLGGNDRVLVFQR 289 >gi|86359339|ref|YP_471231.1| protoporphyrinogen oxidase (methyltransferase) protein [Rhizobium etli CFN 42] gi|86283441|gb|ABC92504.1| protoporphyrinogen oxidase (methyltransferase) protein [Rhizobium etli CFN 42] Length = 286 Score = 234 bits (596), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 118/258 (45%), Positives = 160/258 (62%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ + + LSS +++ L Q + A+ R L HE +HRILG R+FY + L Sbjct: 27 DARLLVAGLLKLSSTELLTRSAEKLSPEQIEVIFKAVERRLGHEPVHRILGEREFYGLPL 86 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 LSS T EPRP+TE+LVD+ L + + + + ILD+GTG+GA+CLALL E P G+ Sbjct: 87 GLSSGTLEPRPDTEILVDTVLPYLKDLAKAQRHLHILDIGTGSGAICLALLSECPAASGI 146 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185 G DIS AL AKSNA NG+ +RF +QS WF +++G F IVSNPPYI S ++ L Sbjct: 147 GSDISADALRTAKSNAERNGLQDRFQAVQSKWFENIQGSFHAIVSNPPYIASNVIHDLAP 206 Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245 EV FDP +LDGG DGL Y+ IA R + DG+ +EIGY+Q+ DV IFE++ Sbjct: 207 EVTKFDPVAALDGGPDGLDAYKAIAKDAVRFMRPDGILGLEIGYDQRNDVTAIFEAKGFR 266 Query: 246 LVNAFKDYGGNDRVLLFC 263 + + KDYG NDR L+F Sbjct: 267 CLKSVKDYGQNDRALVFA 284 >gi|241206501|ref|YP_002977597.1| modification methylase, HemK family [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240860391|gb|ACS58058.1| modification methylase, HemK family [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 286 Score = 233 bits (594), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 119/260 (45%), Positives = 165/260 (63%), Gaps = 4/260 (1%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ + + LS +++ L Q + A+ R L HE +HRILG R+FY + L Sbjct: 27 DARLLVAGLLKLSPTELLTRSAERLSAEQAEAIFRALERRLGHEPVHRILGEREFYGLPL 86 Query: 66 TLSSDTFEPRPETELLVDSALAF--SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 LS++T EPRP+TE+LVD+ L + L +++ R + ILD+GTGTGA+CLALL + P Sbjct: 87 RLSAETLEPRPDTEILVDTVLVYLKDLAKVQSR--LHILDMGTGTGAICLALLSDCPDAS 144 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183 GVG DIS AL A+SNA NG+ +RF +QS WF +++G F IVSNPPYI S ++ L Sbjct: 145 GVGSDISADALLTARSNAERNGLQDRFQVVQSSWFENIQGSFHAIVSNPPYIASNVIHDL 204 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 EV FDP +LDGG DGL Y+ IA +R + DG+ +EIGY+Q+ DV IFE++ Sbjct: 205 APEVTKFDPAAALDGGPDGLDAYKAIAKDAARFIRPDGVVGLEIGYDQRNDVTAIFEAKG 264 Query: 244 LFLVNAFKDYGGNDRVLLFC 263 + + KDYG NDRVL+F Sbjct: 265 FRCLKSVKDYGQNDRVLVFA 284 >gi|327193409|gb|EGE60309.1| protoporphyrinogen oxidase (methyltransferase) protein [Rhizobium etli CNPAF512] Length = 279 Score = 233 bits (593), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 118/253 (46%), Positives = 159/253 (62%), Gaps = 3/253 (1%) Query: 14 VTGL---SSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70 V GL SS +++ L Q ++ A+ R L HE +HRILG R+FY + L LS++ Sbjct: 25 VAGLLKQSSTELLTRSAEKLSPDQIAMISKALERRLGHEPVHRILGEREFYGLPLQLSAE 84 Query: 71 TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130 T EPRP+TE+LVD+ LA+ + + ILD+GTGTGA+CLALL E P G+G DIS Sbjct: 85 TLEPRPDTEILVDTVLAYLKDLAKAHGDLHILDIGTGTGAICLALLSECPEASGIGSDIS 144 Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDF 190 AL A+SNA +G+ +RF +QS WF ++ G F IVSNPPYI S ++ L EV F Sbjct: 145 ADALGTARSNAERHGLQDRFQAVQSSWFENIRGSFHAIVSNPPYIASNVIHDLAPEVTKF 204 Query: 191 DPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAF 250 DP +LDGG DGL Y IA +R + DG+ +EIGY+Q+ DV IFE++ + + Sbjct: 205 DPVAALDGGPDGLDAYHAIAKDAARFMRPDGVLGLEIGYDQRNDVTAIFEAKGFRCLKSV 264 Query: 251 KDYGGNDRVLLFC 263 KDYG NDR L+F Sbjct: 265 KDYGQNDRALMFA 277 >gi|190893590|ref|YP_001980132.1| protoporphyrinogen oxidase (methyltransferase) protein [Rhizobium etli CIAT 652] gi|190698869|gb|ACE92954.1| protoporphyrinogen oxidase (methyltransferase) protein [Rhizobium etli CIAT 652] Length = 286 Score = 233 bits (593), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 118/253 (46%), Positives = 159/253 (62%), Gaps = 3/253 (1%) Query: 14 VTGL---SSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70 V GL SS +++ L Q ++ A+ R L HE +HRILG R+FY + L LS++ Sbjct: 32 VAGLLKQSSTELLTRSAEKLSPDQIAMISKALERRLGHEPVHRILGEREFYGLPLQLSAE 91 Query: 71 TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130 T EPRP+TE+LVD+ LA+ + + ILD+GTGTGA+CLALL E P G+G DIS Sbjct: 92 TLEPRPDTEILVDTVLAYLKDLAKAHGDLHILDIGTGTGAICLALLSECPEASGIGSDIS 151 Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDF 190 AL A+SNA +G+ +RF +QS WF ++ G F IVSNPPYI S ++ L EV F Sbjct: 152 ADALGTARSNAERHGLQDRFHAVQSSWFENIRGSFHAIVSNPPYIASNVIHDLAPEVTKF 211 Query: 191 DPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAF 250 DP +LDGG DGL Y IA +R + DG+ +EIGY+Q+ DV IFE++ + + Sbjct: 212 DPVAALDGGPDGLDAYHAIAKDAARFMRPDGVLGLEIGYDQRNDVTAIFEAKGFRCLKSV 271 Query: 251 KDYGGNDRVLLFC 263 KDYG NDR L+F Sbjct: 272 KDYGQNDRALMFA 284 >gi|13472969|ref|NP_104536.1| protoporphyrinogen oxidase, hemK protein [Mesorhizobium loti MAFF303099] gi|18202648|sp|Q98G94|HEMK_RHILO RecName: Full=Protein methyltransferase hemK homolog; AltName: Full=M.MloHemKP gi|14023717|dbj|BAB50322.1| protoporphyrinogen oxidase; HemK [Mesorhizobium loti MAFF303099] Length = 290 Score = 232 bits (592), Expect = 4e-59, Method: Compositional matrix adjust. Identities = 118/257 (45%), Positives = 157/257 (61%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ + +G + Q I DP+ +D + A+ R E +HRILG+R+FY +RL Sbjct: 31 DARLIVEHFSGTTRTQAIADPERTIDSNAIAAIDAALGRRAGGEPVHRILGYREFYGLRL 90 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 +LS +T EPRP+TE LV++ L F + RILDLGTGTGA+ LALL P Sbjct: 91 SLSPETLEPRPDTETLVEAVLPFVKAMAAREGTCRILDLGTGTGAIALALLSAVPAATAT 150 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185 GVDIS AL A NA G+ RF T+QSDWF V G + VI +NPPYI + + L Sbjct: 151 GVDISAGALATAARNAGELGLGGRFTTVQSDWFEKVSGRYHVIAANPPYIPTRDIGNLQD 210 Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245 EVRDFDPR++LDGG+DGL+ YR IA +R L + +VEIG+ Q+ +V IF++ Sbjct: 211 EVRDFDPRLALDGGVDGLNPYRIIAAEAARFLEAESRIAVEIGHTQRDEVTDIFKAAGYA 270 Query: 246 LVNAFKDYGGNDRVLLF 262 V A +D GGNDRVL+F Sbjct: 271 SVAALRDLGGNDRVLVF 287 >gi|222149910|ref|YP_002550867.1| protoporphyrinogen oxidase [Agrobacterium vitis S4] gi|221736892|gb|ACM37855.1| protoporphyrinogen oxidase [Agrobacterium vitis S4] Length = 293 Score = 227 bits (578), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 118/262 (45%), Positives = 167/262 (63%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A RD+ + + + GL+S +IV + VL + + A+ R L E +HRILG R FY Sbjct: 27 APRDARTLIAGLLGLTSTDLIVQDNRVLSAEETSLIETAVERRLLFEPVHRILGRRAFYG 86 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L LS T EPRP+TE+L++ L + K VR+LD+GTGTGA+ LALL+E P Sbjct: 87 LELALSPATLEPRPDTEILIERVLPHLHAMVAKNGSVRLLDMGTGTGAIALALLQECPGT 146 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182 + DIS +AL +A+ NA N +S+RF+TLQS W+ ++ G FD+I+SNPPYI S ++ Sbjct: 147 TALATDISAEALAMARQNAAANSLSDRFETLQSHWYEALSGRFDIILSNPPYIVSDVIKD 206 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 L +VR +DP ++LDGG DGL YR IA G + L GL VEIGY+Q + V ++F + Sbjct: 207 LAPDVRLYDPAVALDGGDDGLDAYRAIAAGAADFLKPGGLVGVEIGYDQAMAVTQLFANN 266 Query: 243 KLFLVNAFKDYGGNDRVLLFCR 264 LV + KD+G NDR+LLF + Sbjct: 267 SFVLVESAKDHGDNDRILLFAQ 288 >gi|319781346|ref|YP_004140822.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317167234|gb|ADV10772.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 290 Score = 221 bits (563), Expect = 7e-56, Method: Compositional matrix adjust. Identities = 117/259 (45%), Positives = 157/259 (60%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ + +G + Q I DP+ + + A+ R E +HRILG+R+FY +RL Sbjct: 29 DARLIVEHFSGTTRTQAIADPERRVGAGAVAEIDAALRRRAGGEPVHRILGYREFYGLRL 88 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 +LS +T EPRP+TE LV++ L F + RILDLGTGTGA+ LALL P Sbjct: 89 SLSPETLEPRPDTETLVEAILPFVKAVATQEGECRILDLGTGTGAIALALLSVVPTANAT 148 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185 GVD+S AL A NA G++ RF LQSDWF V G + VIV+NPPYI S + L Sbjct: 149 GVDLSAGALATAARNAGQLGLAGRFTALQSDWFEKVSGRYHVIVANPPYISSEDIGNLQD 208 Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245 EV +FDPR++LDGG DGL+ YRTIA +R L +G +VEIG+ Q+ +V IF + Sbjct: 209 EVLNFDPRLALDGGADGLNPYRTIAAEAARFLEIEGRIAVEIGHTQRNEVCEIFTAAGYV 268 Query: 246 LVNAFKDYGGNDRVLLFCR 264 + F+D GGNDRV++F R Sbjct: 269 PGSVFRDLGGNDRVIVFER 287 >gi|218660371|ref|ZP_03516301.1| protoporphyrinogen oxidase (methyltransferase) protein [Rhizobium etli IE4771] Length = 215 Score = 218 bits (556), Expect = 5e-55, Method: Compositional matrix adjust. Identities = 107/213 (50%), Positives = 141/213 (66%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110 +HRILG R+FY + L LS++T EPRP+TE+LVD+ LA+ + + ILD+GTGTGA Sbjct: 1 MHRILGEREFYGLPLQLSAETREPRPDTEILVDTVLAYLKDLAKVHGHLHILDIGTGTGA 60 Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170 +CLALL E P G+G DIS AL A+SNA NG+ +RF +QS WF ++G F IVS Sbjct: 61 ICLALLSECPEASGIGSDISADALGTARSNAERNGLQDRFQAVQSRWFEDIQGSFHAIVS 120 Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230 NPPYI S ++ L EV FDP +LDGG DGL Y IA +R + DG+ +EIGY+ Sbjct: 121 NPPYIASNVIHDLAPEVTKFDPVAALDGGPDGLDAYHAIAKDAARFMRPDGVLGLEIGYD 180 Query: 231 QKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFC 263 Q+ DV IFE++ + + KDYG NDR L+F Sbjct: 181 QRNDVTAIFEAKGFSCLKSVKDYGQNDRALIFA 213 >gi|15966363|ref|NP_386716.1| putative methyltransferase protein [Sinorhizobium meliloti 1021] gi|307313050|ref|ZP_07592677.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Sinorhizobium meliloti BL225C] gi|307321057|ref|ZP_07600463.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Sinorhizobium meliloti AK83] gi|15075634|emb|CAC47189.1| Putative methyltransferase [Sinorhizobium meliloti 1021] gi|306893332|gb|EFN24112.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Sinorhizobium meliloti AK83] gi|306899369|gb|EFN30003.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Sinorhizobium meliloti BL225C] Length = 293 Score = 216 bits (550), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 112/222 (50%), Positives = 149/222 (67%) Query: 41 AIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR 100 A+ R HE ++RILG R+F+ ++L LS +T EPRP+TE+LVD + + + R Sbjct: 62 AVERRAAHEPVYRILGEREFFGLKLKLSKETLEPRPDTEILVDCLIPHARRIASSKGSCR 121 Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 I+DLGTGTGA+CLALL +G+G DIS AL A NA NG++ERF T++S WF + Sbjct: 122 IVDLGTGTGAICLALLAAVLDARGLGTDISEDALATALENARRNGLAERFGTVRSKWFEA 181 Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220 V+G FD+IVSNPPYI S ++ L EVR DP +LDGG DGL YR IA RHL D Sbjct: 182 VDGRFDIIVSNPPYIRSNVIPELEPEVRYHDPVAALDGGEDGLDAYRAIASHAGRHLETD 241 Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262 G+ +EIG++QK V +FE++ L++A KD GGNDRVL+F Sbjct: 242 GVIGLEIGFDQKRAVTALFEAQGFRLLSAAKDLGGNDRVLVF 283 >gi|110635327|ref|YP_675535.1| HemK family modification methylase [Mesorhizobium sp. BNC1] gi|110286311|gb|ABG64370.1| [protein release factor]-glutamine N5-methyltransferase [Chelativorans sp. BNC1] Length = 288 Score = 214 bits (545), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 114/243 (46%), Positives = 149/243 (61%) Query: 21 QVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETEL 80 Q I P+ ++ + A+ R + E +HRILG RDFY ++L LS +T EPRP+TE Sbjct: 43 QAITHPECAVEAAVAEKVARAVERRIAGEPVHRILGHRDFYGLKLALSPETLEPRPDTET 102 Query: 81 LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140 LVD L + + RILDLGTGTGA+ LALL P + VG DIS ALE A+ N Sbjct: 103 LVDLVLPEARRIANVKKHCRILDLGTGTGAIALALLSVVPEAEAVGTDISEGALETARHN 162 Query: 141 AVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200 A + V+ERF L+SDWF +V+G FD+IVSNPPYI + ++ L EVR+ DP+ +LDGG Sbjct: 163 ADMSFVAERFTPLRSDWFRNVDGRFDLIVSNPPYIATAEMETLPREVREHDPKAALDGGP 222 Query: 201 DGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 DGL YR IA G HL ++GL +VE G QK V IF + + +D GG DR + Sbjct: 223 DGLMPYRAIASGARDHLTREGLIAVETGAEQKAAVAAIFAAEGYAVSRTARDLGGRDRAM 282 Query: 261 LFC 263 LF Sbjct: 283 LFA 285 >gi|150397699|ref|YP_001328166.1| HemK family modification methylase [Sinorhizobium medicae WSM419] gi|150029214|gb|ABR61331.1| modification methylase, HemK family [Sinorhizobium medicae WSM419] Length = 292 Score = 214 bits (544), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 108/222 (48%), Positives = 146/222 (65%) Query: 41 AIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR 100 A+ R HE ++RILG R+F ++L LS +T EPRP+TE +V+ + + K+ R Sbjct: 62 AVERRAAHEPVYRILGEREFSGLKLKLSKETLEPRPDTETMVECLIPHARRIALKKGSCR 121 Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 I+DLGTGTGA+CLALL +G+G DIS AL A NA NG++ RF+TL+S+W + Sbjct: 122 IVDLGTGTGAICLALLDAVLDARGLGTDISEDALATACENARRNGLAGRFETLRSNWLEA 181 Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220 V G FD+IVSNPPYI S ++ L EV+ DP +LDGG DGL+ YR IA RHL D Sbjct: 182 VNGRFDIIVSNPPYIRSNVIPDLEPEVKFHDPAAALDGGEDGLNAYRAIASDAGRHLEPD 241 Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262 G+ +EIG++QK V +FE+ ++ A KD GGNDRVL+F Sbjct: 242 GVIGLEIGFDQKQAVTALFEAHGFHMLYAAKDLGGNDRVLVF 283 >gi|306842977|ref|ZP_07475611.1| protein-glutamine-N5 methyltransferase, release factor-specific [Brucella sp. BO2] gi|306286905|gb|EFM58430.1| protein-glutamine-N5 methyltransferase, release factor-specific [Brucella sp. BO2] Length = 295 Score = 209 bits (531), Expect = 4e-52, Method: Compositional matrix adjust. Identities = 106/259 (40%), Positives = 152/259 (58%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ + TG + ++ P+ ++ + L A+ R E +HRI+G R+FY + Sbjct: 31 DARLLIEWATGATRLDLVSQPEKLIGSAEAEKLRAALERRAGGEPVHRIMGQREFYGLPF 90 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 LS+ T EPRP+TE LV+ + I + + +LD+GTGTGA+ ++LL G+ Sbjct: 91 RLSAQTLEPRPDTEALVELVIPVLEQLIARHGMAEVLDMGTGTGAIIISLLHRFEHMHGI 150 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185 GVD++ AL A+ NA+ NGV ERF L+SDWFS+V G F +IVSNPPYI + L Sbjct: 151 GVDVAEGALATARINAIDNGVGERFAGLKSDWFSNVSGKFHLIVSNPPYIPHAEIAGLSR 210 Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245 EVR+ DP +LDGG DGL Y+ +A GV +L KDG+ +VEIG Q DV +F+S Sbjct: 211 EVREHDPLAALDGGPDGLDFYKALAQGVGAYLYKDGMVAVEIGAGQFQDVEALFKSTGFS 270 Query: 246 LVNAFKDYGGNDRVLLFCR 264 L D GG+ R +LF + Sbjct: 271 LAGEANDLGGHRRAMLFGQ 289 >gi|163843894|ref|YP_001628298.1| HemK family methyltransferase [Brucella suis ATCC 23445] gi|189024939|ref|YP_001935707.1| methyltransferase [Brucella abortus S19] gi|225628072|ref|ZP_03786107.1| methyltransferase, HemK family protein [Brucella ceti str. Cudo] gi|225853307|ref|YP_002733540.1| methyltransferase, HemK family protein [Brucella melitensis ATCC 23457] gi|237816234|ref|ZP_04595227.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Brucella abortus str. 2308 A] gi|254690016|ref|ZP_05153270.1| methyltransferase, HemK family protein [Brucella abortus bv. 6 str. 870] gi|254694506|ref|ZP_05156334.1| methyltransferase, HemK family protein [Brucella abortus bv. 3 str. Tulya] gi|254696131|ref|ZP_05157959.1| methyltransferase, HemK family protein [Brucella abortus bv. 2 str. 86/8/59] gi|254700515|ref|ZP_05162343.1| methyltransferase, HemK family protein [Brucella suis bv. 5 str. 513] gi|254707599|ref|ZP_05169427.1| methyltransferase, HemK family protein [Brucella pinnipedialis M163/99/10] gi|254708864|ref|ZP_05170675.1| methyltransferase, HemK family protein [Brucella pinnipedialis B2/94] gi|254713713|ref|ZP_05175524.1| methyltransferase, HemK family protein [Brucella ceti M644/93/1] gi|254715937|ref|ZP_05177748.1| methyltransferase, HemK family protein [Brucella ceti M13/05/1] gi|254717938|ref|ZP_05179749.1| methyltransferase, HemK family protein [Brucella sp. 83/13] gi|254731049|ref|ZP_05189627.1| methyltransferase, HemK family protein [Brucella abortus bv. 4 str. 292] gi|256030390|ref|ZP_05444004.1| methyltransferase, HemK family protein [Brucella pinnipedialis M292/94/1] gi|256045466|ref|ZP_05448353.1| methyltransferase, HemK family protein [Brucella melitensis bv. 1 str. Rev.1] gi|256158373|ref|ZP_05456271.1| methyltransferase, HemK family protein [Brucella ceti M490/95/1] gi|256253792|ref|ZP_05459328.1| methyltransferase, HemK family protein [Brucella ceti B1/94] gi|256258271|ref|ZP_05463807.1| methyltransferase, HemK family protein [Brucella abortus bv. 9 str. C68] gi|256263205|ref|ZP_05465737.1| methyltransferase [Brucella melitensis bv. 2 str. 63/9] gi|260169299|ref|ZP_05756110.1| methyltransferase, HemK family protein [Brucella sp. F5/99] gi|260545991|ref|ZP_05821731.1| methyltransferase [Brucella abortus NCTC 8038] gi|260755552|ref|ZP_05867900.1| modification methylase [Brucella abortus bv. 6 str. 870] gi|260758775|ref|ZP_05871123.1| modification methylase [Brucella abortus bv. 4 str. 292] gi|260760499|ref|ZP_05872842.1| modification methylase [Brucella abortus bv. 2 str. 86/8/59] gi|260884576|ref|ZP_05896190.1| modification methylase [Brucella abortus bv. 9 str. C68] gi|261214823|ref|ZP_05929104.1| modification methylase [Brucella abortus bv. 3 str. Tulya] gi|261217700|ref|ZP_05931981.1| modification methylase [Brucella ceti M13/05/1] gi|261315086|ref|ZP_05954283.1| modification methylase [Brucella pinnipedialis M163/99/10] gi|261316357|ref|ZP_05955554.1| modification methylase [Brucella pinnipedialis B2/94] gi|261321453|ref|ZP_05960650.1| modification methylase [Brucella ceti M644/93/1] gi|261751019|ref|ZP_05994728.1| modification methylase [Brucella suis bv. 5 str. 513] gi|261758812|ref|ZP_06002521.1| methyltransferase [Brucella sp. F5/99] gi|265982881|ref|ZP_06095616.1| modification methylase [Brucella sp. 83/13] gi|265987429|ref|ZP_06099986.1| modification methylase [Brucella pinnipedialis M292/94/1] gi|265991892|ref|ZP_06104449.1| modification methylase [Brucella melitensis bv. 1 str. Rev.1] gi|265996885|ref|ZP_06109442.1| modification methylase [Brucella ceti M490/95/1] gi|294851111|ref|ZP_06791784.1| protein-(glutamine-N5) methyltransferase [Brucella sp. NVSL 07-0026] gi|297247115|ref|ZP_06930833.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Brucella abortus bv. 5 str. B3196] gi|306838262|ref|ZP_07471112.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Brucella sp. NF 2653] gi|163674617|gb|ABY38728.1| methyltransferase, HemK family [Brucella suis ATCC 23445] gi|189020511|gb|ACD73233.1| Methyltransferase [Brucella abortus S19] gi|225616897|gb|EEH13944.1| methyltransferase, HemK family protein [Brucella ceti str. Cudo] gi|225641672|gb|ACO01586.1| methyltransferase, HemK family protein [Brucella melitensis ATCC 23457] gi|237788301|gb|EEP62516.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Brucella abortus str. 2308 A] gi|260096098|gb|EEW79974.1| methyltransferase [Brucella abortus NCTC 8038] gi|260669093|gb|EEX56033.1| modification methylase [Brucella abortus bv. 4 str. 292] gi|260670931|gb|EEX57752.1| modification methylase [Brucella abortus bv. 2 str. 86/8/59] gi|260675660|gb|EEX62481.1| modification methylase [Brucella abortus bv. 6 str. 870] gi|260874104|gb|EEX81173.1| modification methylase [Brucella abortus bv. 9 str. C68] gi|260916430|gb|EEX83291.1| modification methylase [Brucella abortus bv. 3 str. Tulya] gi|260922789|gb|EEX89357.1| modification methylase [Brucella ceti M13/05/1] gi|261294143|gb|EEX97639.1| modification methylase [Brucella ceti M644/93/1] gi|261295580|gb|EEX99076.1| modification methylase [Brucella pinnipedialis B2/94] gi|261304112|gb|EEY07609.1| modification methylase [Brucella pinnipedialis M163/99/10] gi|261738796|gb|EEY26792.1| methyltransferase [Brucella sp. F5/99] gi|261740772|gb|EEY28698.1| modification methylase [Brucella suis bv. 5 str. 513] gi|262551353|gb|EEZ07343.1| modification methylase [Brucella ceti M490/95/1] gi|263002900|gb|EEZ15251.1| modification methylase [Brucella melitensis bv. 1 str. Rev.1] gi|263093127|gb|EEZ17262.1| methyltransferase [Brucella melitensis bv. 2 str. 63/9] gi|264659626|gb|EEZ29887.1| modification methylase [Brucella pinnipedialis M292/94/1] gi|264661473|gb|EEZ31734.1| modification methylase [Brucella sp. 83/13] gi|294819700|gb|EFG36699.1| protein-(glutamine-N5) methyltransferase [Brucella sp. NVSL 07-0026] gi|297174284|gb|EFH33631.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Brucella abortus bv. 5 str. B3196] gi|306406665|gb|EFM62894.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Brucella sp. NF 2653] gi|326409871|gb|ADZ66936.1| Methyltransferase [Brucella melitensis M28] gi|326539584|gb|ADZ87799.1| methyltransferase, HemK family protein [Brucella melitensis M5-90] Length = 295 Score = 208 bits (529), Expect = 6e-52, Method: Compositional matrix adjust. Identities = 106/259 (40%), Positives = 151/259 (58%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ + TG + ++ P+ ++ + L A+ R E +HRI+G R+FY + Sbjct: 31 DARLLIEWATGATRLDLVSQPEKLIGSAEAEKLRAALERRAGGEPVHRIMGQREFYGLPF 90 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 LS+ T EPRP+TE LV+ + I + +LD+GTGTGA+ ++LL G+ Sbjct: 91 RLSAQTLEPRPDTEALVELVIPVLEQLIARHGTAEVLDMGTGTGAIIISLLHRFEHMHGI 150 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185 GVD++ AL A+ NA+ NGV ERF L+SDWFS+V G F +IVSNPPYI + L Sbjct: 151 GVDVAEGALATARINAIDNGVGERFAGLKSDWFSNVSGKFHLIVSNPPYIPHAEIAGLSR 210 Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245 EVR+ DP +LDGG DGL Y+ +A GV +L KDG+ +VEIG Q DV +F+S Sbjct: 211 EVREHDPLAALDGGPDGLDFYKALAQGVGAYLYKDGMVAVEIGAGQFQDVEALFKSTGFS 270 Query: 246 LVNAFKDYGGNDRVLLFCR 264 L D GG+ R +LF + Sbjct: 271 LAGEANDLGGHRRAMLFGQ 289 >gi|256112205|ref|ZP_05453126.1| methyltransferase, HemK family protein [Brucella melitensis bv. 3 str. Ether] gi|265993633|ref|ZP_06106190.1| modification methylase [Brucella melitensis bv. 3 str. Ether] gi|262764614|gb|EEZ10535.1| modification methylase [Brucella melitensis bv. 3 str. Ether] Length = 295 Score = 208 bits (529), Expect = 7e-52, Method: Compositional matrix adjust. Identities = 106/259 (40%), Positives = 151/259 (58%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ + TG + ++ P+ ++ + L A+ R E +HRI+G R+FY + Sbjct: 31 DARLLIEWATGATRLDLVSQPEKLIGSAEAEKLRAALERRAGGEPVHRIMGQREFYGLPF 90 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 LS+ T EPRP+TE LV+ + I + +LD+GTGTGA+ ++LL G+ Sbjct: 91 RLSAQTLEPRPDTEALVELVIPVLEQLIARHGTAEVLDMGTGTGAIIISLLHRFEHMHGI 150 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185 GVD++ AL A+ NA+ NGV ERF L+SDWFS+V G F +IVSNPPYI + L Sbjct: 151 GVDVAEGALATARINAIDNGVGERFAGLKSDWFSNVSGKFHLIVSNPPYIPHAEIAGLSR 210 Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245 EVR+ DP +LDGG DGL Y+ +A GV +L KDG+ +VEIG Q DV +F+S Sbjct: 211 EVREHDPLAALDGGPDGLDFYKALAQGVGAYLYKDGMVAVEIGAGQFQDVGALFKSTGFS 270 Query: 246 LVNAFKDYGGNDRVLLFCR 264 L D GG+ R +LF + Sbjct: 271 LAGEANDLGGHRRAMLFGQ 289 >gi|62290729|ref|YP_222522.1| hypothetical protein BruAb1_1847 [Brucella abortus bv. 1 str. 9-941] gi|261220925|ref|ZP_05935206.1| modification methylase [Brucella ceti B1/94] gi|62196861|gb|AAX75161.1| HemK [Brucella abortus bv. 1 str. 9-941] gi|260919509|gb|EEX86162.1| modification methylase [Brucella ceti B1/94] Length = 290 Score = 208 bits (529), Expect = 7e-52, Method: Compositional matrix adjust. Identities = 106/259 (40%), Positives = 151/259 (58%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ + TG + ++ P+ ++ + L A+ R E +HRI+G R+FY + Sbjct: 26 DARLLIEWATGATRLDLVSQPEKLIGSAEAEKLRAALERRAGGEPVHRIMGQREFYGLPF 85 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 LS+ T EPRP+TE LV+ + I + +LD+GTGTGA+ ++LL G+ Sbjct: 86 RLSAQTLEPRPDTEALVELVIPVLEQLIARHGTAEVLDMGTGTGAIIISLLHRFEHMHGI 145 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185 GVD++ AL A+ NA+ NGV ERF L+SDWFS+V G F +IVSNPPYI + L Sbjct: 146 GVDVAEGALATARINAIDNGVGERFAGLKSDWFSNVSGKFHLIVSNPPYIPHAEIAGLSR 205 Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245 EVR+ DP +LDGG DGL Y+ +A GV +L KDG+ +VEIG Q DV +F+S Sbjct: 206 EVREHDPLAALDGGPDGLDFYKALAQGVGAYLYKDGMVAVEIGAGQFQDVEALFKSTGFS 265 Query: 246 LVNAFKDYGGNDRVLLFCR 264 L D GG+ R +LF + Sbjct: 266 LAGEANDLGGHRRAMLFGQ 284 >gi|82700641|ref|YP_415215.1| N-6 adenine-specific DNA methylase [Brucella melitensis biovar Abortus 2308] gi|148560045|ref|YP_001259696.1| protein-(glutamine-N5) methyltransferase [Brucella ovis ATCC 25840] gi|256370268|ref|YP_003107779.1| hemK protein [Brucella microti CCM 4915] gi|82616742|emb|CAJ11827.1| SAM (and some other nucleotide) binding motif:N-6 Adenine-specific DNA methylase:N6 adenine-specific DNA methyltransferase, N [Brucella melitensis biovar Abortus 2308] gi|148371302|gb|ABQ61281.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Brucella ovis ATCC 25840] gi|256000431|gb|ACU48830.1| hemK protein [Brucella microti CCM 4915] Length = 283 Score = 208 bits (529), Expect = 7e-52, Method: Compositional matrix adjust. Identities = 106/259 (40%), Positives = 151/259 (58%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ + TG + ++ P+ ++ + L A+ R E +HRI+G R+FY + Sbjct: 19 DARLLIEWATGATRLDLVSQPEKLIGSAEAEKLRAALERRAGGEPVHRIMGQREFYGLPF 78 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 LS+ T EPRP+TE LV+ + I + +LD+GTGTGA+ ++LL G+ Sbjct: 79 RLSAQTLEPRPDTEALVELVIPVLEQLIARHGTAEVLDMGTGTGAIIISLLHRFEHMHGI 138 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185 GVD++ AL A+ NA+ NGV ERF L+SDWFS+V G F +IVSNPPYI + L Sbjct: 139 GVDVAEGALATARINAIDNGVGERFAGLKSDWFSNVSGKFHLIVSNPPYIPHAEIAGLSR 198 Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245 EVR+ DP +LDGG DGL Y+ +A GV +L KDG+ +VEIG Q DV +F+S Sbjct: 199 EVREHDPLAALDGGPDGLDFYKALAQGVGAYLYKDGMVAVEIGAGQFQDVEALFKSTGFS 258 Query: 246 LVNAFKDYGGNDRVLLFCR 264 L D GG+ R +LF + Sbjct: 259 LAGEANDLGGHRRAMLFGQ 277 >gi|306844841|ref|ZP_07477424.1| glutamine-N5 methyltransferase, release factor-specific [Brucella sp. BO1] gi|306274773|gb|EFM56554.1| glutamine-N5 methyltransferase, release factor-specific [Brucella sp. BO1] Length = 295 Score = 207 bits (527), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 106/259 (40%), Positives = 151/259 (58%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ + TG + ++ P+ ++ + L A+ R E +HRI+G R+FY + Sbjct: 31 DARLLIEWATGATCLDLVSQPEKLIGSAEAEKLRAALERRAGGEPVHRIMGQREFYGLPF 90 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 LS+ T EPRP+TE LV+ + I + +LD+GTGTGA+ ++LL G+ Sbjct: 91 RLSAQTLEPRPDTEALVELVIPVLEQIIARHGTAEVLDMGTGTGAIIISLLHRFEHMHGI 150 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185 GVD++ AL A+ NA+ NGV ERF L+SDWFS+V G F +IVSNPPYI + L Sbjct: 151 GVDVAEGALATARINAIDNGVGERFAGLKSDWFSNVSGKFHLIVSNPPYIPHAEIAGLSR 210 Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245 EVR+ DP +LDGG DGL Y+ +A GV +L KDG+ +VEIG Q DV +F+S Sbjct: 211 EVREHDPLAALDGGPDGLDFYKALAQGVGAYLYKDGMVAVEIGAGQFQDVEALFKSTGFS 270 Query: 246 LVNAFKDYGGNDRVLLFCR 264 L D GG+ R +LF + Sbjct: 271 LAGEANDLGGHRRAMLFGQ 289 >gi|161619786|ref|YP_001593673.1| HemK family methyltransferase [Brucella canis ATCC 23365] gi|254704886|ref|ZP_05166714.1| HemK family methyltransferase [Brucella suis bv. 3 str. 686] gi|260567640|ref|ZP_05838110.1| methyltransferase [Brucella suis bv. 4 str. 40] gi|261755580|ref|ZP_05999289.1| modification methylase [Brucella suis bv. 3 str. 686] gi|161336597|gb|ABX62902.1| methyltransferase, HemK family [Brucella canis ATCC 23365] gi|260157158|gb|EEW92238.1| methyltransferase [Brucella suis bv. 4 str. 40] gi|261745333|gb|EEY33259.1| modification methylase [Brucella suis bv. 3 str. 686] Length = 295 Score = 207 bits (527), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 105/259 (40%), Positives = 151/259 (58%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ + TG + ++ P+ ++ + L A+ R E +HRI+G R+FY + Sbjct: 31 DARLLIEWATGATRLDLVSQPEKLIGSAEAEKLRAALERRAGGEPVHRIMGQREFYGLPF 90 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 LS+ T EPRP+TE L++ + I + +LD+GTGTGA+ ++LL G+ Sbjct: 91 RLSAQTLEPRPDTEALMELVIPVLEQLIARHGTAEVLDMGTGTGAIIISLLHRFEHMHGI 150 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185 GVD++ AL A+ NA+ NGV ERF L+SDWFS+V G F +IVSNPPYI + L Sbjct: 151 GVDVAEGALATARINAIDNGVGERFAGLKSDWFSNVSGKFHLIVSNPPYIPHAEIAGLSR 210 Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245 EVR+ DP +LDGG DGL Y+ +A GV +L KDG+ +VEIG Q DV +F+S Sbjct: 211 EVREHDPLAALDGGPDGLDFYKALAQGVGAYLYKDGMVAVEIGAGQFQDVEALFKSTGFS 270 Query: 246 LVNAFKDYGGNDRVLLFCR 264 L D GG+ R +LF + Sbjct: 271 LAGEANDLGGHRRAMLFGQ 289 >gi|17986476|ref|NP_539110.1| methyltransferase [Brucella melitensis bv. 1 str. 16M] gi|260562789|ref|ZP_05833275.1| methyltransferase [Brucella melitensis bv. 1 str. 16M] gi|17982075|gb|AAL51374.1| methyltransferase [Brucella melitensis bv. 1 str. 16M] gi|260152805|gb|EEW87897.1| methyltransferase [Brucella melitensis bv. 1 str. 16M] Length = 295 Score = 207 bits (527), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 106/259 (40%), Positives = 151/259 (58%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ + TG + ++ P+ ++ + L A+ R E +HRI+G R+FY + Sbjct: 31 DARLLIEWATGATRLDLVSQPEKLIGSAEAEKLRAALERRAGGEPVHRIMGQREFYGLPF 90 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 LS+ T EPRP+TE LV+ + I + +LD+GTGTGA+ ++LL G+ Sbjct: 91 RLSAQTLEPRPDTEALVELVIPVLEQLIARHGTAEVLDMGTGTGAIIISLLHRFEHMHGI 150 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185 GVD++ AL A+ NA+ NGV ERF L+SDWFS+V G F +IVSNPPYI + L Sbjct: 151 GVDVAEGALAKARINAIDNGVGERFAGLKSDWFSNVSGKFHLIVSNPPYIPHAEIAGLSR 210 Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245 EVR+ DP +LDGG DGL Y+ +A GV +L KDG+ +VEIG Q DV +F+S Sbjct: 211 EVREHDPLAALDGGPDGLDFYKALAQGVGAYLYKDGMVAVEIGAGQFQDVEALFKSTGFS 270 Query: 246 LVNAFKDYGGNDRVLLFCR 264 L D GG+ R +LF + Sbjct: 271 LAGEANDLGGHRRAMLFGQ 289 >gi|23502721|ref|NP_698848.1| hemK protein [Brucella suis 1330] gi|23348736|gb|AAN30763.1| hemK protein [Brucella suis 1330] Length = 283 Score = 207 bits (527), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 105/259 (40%), Positives = 151/259 (58%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ + TG + ++ P+ ++ + L A+ R E +HRI+G R+FY + Sbjct: 19 DARLLIEWATGATRLDLVSQPEKLIGSAEAEKLRAALERRAGGEPVHRIMGQREFYGLPF 78 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 LS+ T EPRP+TE L++ + I + +LD+GTGTGA+ ++LL G+ Sbjct: 79 RLSAQTLEPRPDTEALMELVIPVLEQLIARHGTAEVLDMGTGTGAIIISLLHRFEHMHGI 138 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185 GVD++ AL A+ NA+ NGV ERF L+SDWFS+V G F +IVSNPPYI + L Sbjct: 139 GVDVAEGALATARINAIDNGVGERFAGLKSDWFSNVSGKFHLIVSNPPYIPHAEIAGLSR 198 Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245 EVR+ DP +LDGG DGL Y+ +A GV +L KDG+ +VEIG Q DV +F+S Sbjct: 199 EVREHDPLAALDGGPDGLDFYKALAQGVGAYLYKDGMVAVEIGAGQFQDVEALFKSTGFS 258 Query: 246 LVNAFKDYGGNDRVLLFCR 264 L D GG+ R +LF + Sbjct: 259 LAGEANDLGGHRRAMLFGQ 277 >gi|256059848|ref|ZP_05450035.1| methyltransferase, HemK family protein [Brucella neotomae 5K33] gi|261323818|ref|ZP_05963015.1| modification methylase [Brucella neotomae 5K33] gi|261299798|gb|EEY03295.1| modification methylase [Brucella neotomae 5K33] Length = 295 Score = 206 bits (524), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 106/259 (40%), Positives = 151/259 (58%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ + TG + ++ P+ ++ + L A+ R E +HRI+G R+FY + Sbjct: 31 DARLLIEWATGATRLDLVSQPEKLIGSAEAEKLRAALERRAGGEPVHRIMGQREFYGLPF 90 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 LS+ T EPRP+TE LV+ + I + +LD+GTGTGA+ ++LL G+ Sbjct: 91 RLSAQTLEPRPDTEALVELVIPVLEQLIARHGTAEVLDMGTGTGAIIISLLHRFEHMHGI 150 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185 GVD++ AL A+ NA+ NGV ERF L+SDWFS+V G F +IVSNPPYI + L Sbjct: 151 GVDVAEGALATARINAIDNGVGERFAGLKSDWFSNVSGKFHLIVSNPPYIPHAEIAGLSR 210 Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245 EVR+ DP +LDGG DGL Y+ +A GV +L KDG+ +VEIG Q DV +F+S Sbjct: 211 EVREHDPLAALDGGPDGLDFYKALAQGVGAYLYKDGMVAVEIGAGQFQDVEALFKSTGFS 270 Query: 246 LVNAFKDYGGNDRVLLFCR 264 L D GG+ R +LF + Sbjct: 271 LACEANDLGGHRRAMLFGQ 289 >gi|227823187|ref|YP_002827159.1| putative modification methylase, HemK family [Sinorhizobium fredii NGR234] gi|227342188|gb|ACP26406.1| putative modification methylase, HemK family [Sinorhizobium fredii NGR234] Length = 298 Score = 204 bits (520), Expect = 8e-51, Method: Compositional matrix adjust. Identities = 105/212 (49%), Positives = 142/212 (66%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110 ++RILG R+F+ + LS +T EPRP+TE LVD + + ++ R++D+GTGTGA Sbjct: 72 VYRILGEREFHGLTFRLSKETLEPRPDTETLVDCLIPYVRRIAARKGCCRLIDMGTGTGA 131 Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170 +CLALL + +G G DIS AL A+ NA NG+++RF TL+SDWF +VEG FD+IVS Sbjct: 132 ICLALLAAALEARGFGTDISEDALATARENAKRNGLADRFQTLRSDWFETVEGRFDIIVS 191 Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230 NPPYI S +V L EVR DP +LDGG DGL YR IA RHL DG+ +EIG++ Sbjct: 192 NPPYIRSSVVGELEPEVRYHDPAAALDGGNDGLDVYRAIAQHAGRHLETDGVVGLEIGFD 251 Query: 231 QKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262 QK V +F+++ L+ + D GGNDRVL+F Sbjct: 252 QKHAVTALFQAQGFRLLESAMDLGGNDRVLIF 283 >gi|319408171|emb|CBI81824.1| Methylase [Bartonella schoenbuchensis R1] Length = 288 Score = 201 bits (512), Expect = 7e-50, Method: Compositional matrix adjust. Identities = 111/258 (43%), Positives = 147/258 (56%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ + VTG + I+ P+ L +Q L AI R + E HRI+G RDFY + L Sbjct: 28 DAKLLVEWVTGTTPTDRILQPNMRLSSKQIAQLKKAIQRRIAGEPTHRIIGKRDFYGISL 87 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 TLS DT EPRP+TE LVD L ++EK LD+GTG+GA+ +A+LK+ + Sbjct: 88 TLSQDTLEPRPDTETLVDLVLPILKKQVEKTGKATFLDMGTGSGAIAIAILKQIIQTYAI 147 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185 VDIS AL+ A NA +++RF L SDWF+SV G FD+IVSNPPYI V L Sbjct: 148 AVDISEDALKTATKNAKHADIAQRFTPLLSDWFTSVTGQFDLIVSNPPYIPEKDVQNLAK 207 Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245 EVR DP +L GG DGL YR +A + HL + +VEIGY+Q+ +V +F+ Sbjct: 208 EVRLHDPLRALVGGKDGLDFYRKLAHESANHLKEKAYVAVEIGYSQQKEVCDLFKKNGFE 267 Query: 246 LVNAFKDYGGNDRVLLFC 263 + KD G R LLF Sbjct: 268 YLKMRKDLNGIPRALLFS 285 >gi|153008372|ref|YP_001369587.1| HemK family modification methylase [Ochrobactrum anthropi ATCC 49188] gi|151560260|gb|ABS13758.1| modification methylase, HemK family [Ochrobactrum anthropi ATCC 49188] Length = 287 Score = 201 bits (510), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 106/254 (41%), Positives = 155/254 (61%), Gaps = 8/254 (3%) Query: 14 VTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFE 73 TG + +I P+ ++D L++A+ R K E +HRI+G R+F+ + LS+ T E Sbjct: 33 ATGKTRLDLISAPEQLVDSAVIETLSDALDRREKGEPVHRIMGVREFFGLPFRLSAATLE 92 Query: 74 PRPETELLVDSALAFSLPRIE----KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129 PRP+TE+LV+ +P +E +++ + +LD+GTGTGA+ ++LL G+G+D+ Sbjct: 93 PRPDTEVLVE----LVIPALEALAVQKNTLELLDMGTGTGAIIISLLHRFERTHGIGLDM 148 Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRD 189 + AL +A+ NAV NGV +RF L+SDWF +V G F +IVSNPPYI + L EVR+ Sbjct: 149 AEGALAMARINAVANGVGDRFAALKSDWFENVSGRFHLIVSNPPYIPHEDIAGLSREVRE 208 Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249 DP +LDGG DGL+ YR +A + HL K G+ +VEIG Q DV +FES L Sbjct: 209 HDPLAALDGGSDGLNFYRALAQKAADHLYKQGMVAVEIGAGQFQDVEALFESAGFSLAGH 268 Query: 250 FKDYGGNDRVLLFC 263 D GG+ R +LF Sbjct: 269 ASDLGGHRRAMLFA 282 >gi|239832946|ref|ZP_04681275.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Ochrobactrum intermedium LMG 3301] gi|239825213|gb|EEQ96781.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Ochrobactrum intermedium LMG 3301] Length = 290 Score = 200 bits (508), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 103/250 (41%), Positives = 151/250 (60%) Query: 14 VTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFE 73 TG + +I P+ ++D L +A+ R K E +HRI+G R+F+ + LS++T E Sbjct: 36 ATGRTRLDLISAPEQLVDGAAIQTLCDALERRAKGEPVHRIMGVREFFGLPFRLSTETLE 95 Query: 74 PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133 PRP+TE LV+ + ++ + + +LD+GTGTGA+ ++LL GVG+D++ A Sbjct: 96 PRPDTEALVELVIPALDVLAQQENTLELLDMGTGTGAIIISLLHRFERAHGVGLDMAEGA 155 Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPR 193 L +A+ NA+ NGV +RF L+SDWF V G F +IVSNPPYI + L EVR+ DP Sbjct: 156 LVMARINAIANGVGDRFAALKSDWFQHVSGRFHLIVSNPPYIPHEDIAGLSREVREHDPL 215 Query: 194 ISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDY 253 +LDGG+DGL+ YR +A + HL + G+ +VEIG Q DV +FES L D Sbjct: 216 AALDGGVDGLNFYRALAQKAADHLYRKGMVAVEIGAGQFQDVEALFESAGFSLAGHASDL 275 Query: 254 GGNDRVLLFC 263 GG+ R +LF Sbjct: 276 GGHRRAMLFA 285 >gi|240849862|ref|YP_002971250.1| protoporphyrinogen oxidase protein [Bartonella grahamii as4aup] gi|240266985|gb|ACS50573.1| protoporphyrinogen oxidase protein [Bartonella grahamii as4aup] Length = 288 Score = 196 bits (498), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 104/258 (40%), Positives = 148/258 (57%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ + +TG+++ + I PD L + A+ R + E ++RI+G R+FY + Sbjct: 28 DAKILVEWITGINAAERISKPDMHLSSEHIIQIEQALQRRIAGEPVYRIIGAREFYGISF 87 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 TLS +T EPRP+TE L+D L F ++E LD+GTG+GA+ + LLK+ P V Sbjct: 88 TLSQETLEPRPDTETLIDLVLPFLQKQVENSGRTTFLDMGTGSGAIAITLLKQIPQSYAV 147 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185 VDIS AL+ AK NA V+ RF L SDWF +V FD IVSNPPYI + + L Sbjct: 148 AVDISEDALKTAKKNAKNAEVAHRFTPLLSDWFDAVADRFDFIVSNPPYIPAQDIKKLAK 207 Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245 EVR +DP +L GG DGL YR +A + +L ++G +VEIGY+Q+ +V +F+ Sbjct: 208 EVRLYDPLRALMGGEDGLYFYRKLAHEAANYLKENGYVAVEIGYSQENEVCNLFKKNGFQ 267 Query: 246 LVNAFKDYGGNDRVLLFC 263 + KD G R LLF Sbjct: 268 CLEVRKDLSGIPRALLFA 285 >gi|319407579|emb|CBI81229.1| Methylase [Bartonella sp. 1-1C] Length = 288 Score = 195 bits (495), Expect = 6e-48, Method: Compositional matrix adjust. Identities = 103/250 (41%), Positives = 145/250 (58%) Query: 14 VTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFE 73 +TG ++ I+ P+ L +Q L AI R + E ++RI+G R+FY + TLS DT E Sbjct: 36 ITGTTASDRILQPNMYLSSQQLVQLEQAINRRIAGEPVYRIIGTREFYGIPFTLSKDTLE 95 Query: 74 PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133 PRP+TE LVD L +EK + +LD+GTG+GA+ +A+LK+ P V VDIS A Sbjct: 96 PRPDTETLVDLVLPILKSHLEKSEQATLLDMGTGSGAIAIAILKQIPQTYAVAVDISEDA 155 Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPR 193 L+ A NA V+ RF L S+WF S++G FD+I+SNPPYI + L EVR DP Sbjct: 156 LKTATKNAQHANVAHRFTPLLSNWFDSIKGQFDLIISNPPYIPEKEIKNLAKEVRQHDPW 215 Query: 194 ISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDY 253 +L+GG DGL YR +A + +L + +VEIGY+Q+ V +FE + +D Sbjct: 216 CALNGGEDGLYFYRKLAYESANYLKEKSYIAVEIGYSQEKKVRDLFEKNGFKCLKIREDL 275 Query: 254 GGNDRVLLFC 263 R LLF Sbjct: 276 NRIPRALLFS 285 >gi|319404589|emb|CBI78195.1| Methylase [Bartonella rochalimae ATCC BAA-1498] Length = 288 Score = 194 bits (493), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 103/250 (41%), Positives = 145/250 (58%) Query: 14 VTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFE 73 +TG ++ I+ P+ L +Q L AI R + E ++RI+G R+FY + TLS DT E Sbjct: 36 ITGTTASDRILQPNMYLSSQQLVQLEQAINRRIAGEPVYRIIGTREFYGIPFTLSKDTLE 95 Query: 74 PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133 PRP+TE LVD L +EK + +LD+GTG+GA+ +A+LK+ P V VDIS A Sbjct: 96 PRPDTETLVDLVLPILKSHLEKSEQATLLDMGTGSGAIAIAILKQIPQTYAVAVDISEDA 155 Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPR 193 L+ A NA V+ RF L S+WF S++G FD+I+SNPPYI + L EVR DP Sbjct: 156 LKTATKNAQHANVAHRFIPLLSNWFDSIKGQFDLIISNPPYIPEKEIKNLAKEVRQHDPW 215 Query: 194 ISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDY 253 +L+GG DGL YR +A + +L + +VEIGY+Q+ V +FE + +D Sbjct: 216 RALNGGEDGLYFYRKLAYESANYLKEKSYIAVEIGYSQEKKVRDLFEKNGFKCLKIREDL 275 Query: 254 GGNDRVLLFC 263 R LLF Sbjct: 276 NKIPRALLFS 285 >gi|170742858|ref|YP_001771513.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Methylobacterium sp. 4-46] gi|168197132|gb|ACA19079.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Methylobacterium sp. 4-46] Length = 295 Score = 194 bits (493), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 106/259 (40%), Positives = 151/259 (58%), Gaps = 3/259 (1%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L G+S +++ D LD+ Q L+ A+ R E + RILG +F+ + Sbjct: 33 DARLILTETLGVSRVDLLLGADGPLDEAQARSLSAALRRRASGEPVARILGAWEFWGLPF 92 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 LS DT PRP+TE LV++AL PR +R+LDLGTG+G + +ALL E P +GV Sbjct: 93 RLSPDTLVPRPDTETLVEAALDLGHPRDA---ALRLLDLGTGSGCLLVALLSEWPRAEGV 149 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185 G+D+S +AL A++NA NGV R L+ DW +++ G FDV V+NPPYI + ++ L Sbjct: 150 GIDLSLEALRTARANAARNGVGARAAWLRGDWAAALAGRFDVAVANPPYIAANLIPGLAP 209 Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245 EVRD DPR++LDGG DGL YR I + L G VEIGY+Q+ + + E+ L Sbjct: 210 EVRDHDPRLALDGGADGLDCYRVILAQAADFLAPGGHLVVEIGYDQEEALRHLAEAAGLR 269 Query: 246 LVNAFKDYGGNDRVLLFCR 264 +V +D G+ R L R Sbjct: 270 VVVVRRDLAGHPRAALLAR 288 >gi|319899229|ref|YP_004159322.1| Methylase [Bartonella clarridgeiae 73] gi|319403193|emb|CBI76752.1| Methylase [Bartonella clarridgeiae 73] Length = 288 Score = 192 bits (487), Expect = 5e-47, Method: Compositional matrix adjust. Identities = 102/249 (40%), Positives = 143/249 (57%) Query: 14 VTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFE 73 +TG ++ I+ P+ L +Q L AI R + E ++RI+G R+FY + LS DT E Sbjct: 36 ITGTNASDRILRPNMCLSSKQLVQLEQAINRRIAGEPVYRIIGTREFYGIPFALSKDTLE 95 Query: 74 PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133 PRP+TE LVD + +EK + +LD+GTG+GA+ +A+LK+ P V VDIS A Sbjct: 96 PRPDTETLVDLVVPILKTHLEKSEQATLLDMGTGSGAIAIAILKQIPQTYAVAVDISEDA 155 Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPR 193 L+ A NA V+ RF L S+WF S++G FD+I+SNPPYI + L EVR DP Sbjct: 156 LKTATKNAQHANVAHRFAPLLSNWFDSIKGQFDLIISNPPYIPEKEIKNLAKEVRQHDPL 215 Query: 194 ISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDY 253 +L GG DGL YR +A +L + G +VEI Y+Q+ V +FE + +D Sbjct: 216 RALIGGKDGLDFYRKLAHESENYLKEKGHIAVEISYSQEKKVCDLFEKNGFKCLKIREDL 275 Query: 254 GGNDRVLLF 262 G R LLF Sbjct: 276 NGIPRALLF 284 >gi|319406094|emb|CBI79724.1| Methylase [Bartonella sp. AR 15-3] Length = 288 Score = 192 bits (487), Expect = 5e-47, Method: Compositional matrix adjust. Identities = 103/249 (41%), Positives = 144/249 (57%) Query: 14 VTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFE 73 VTG ++ I+ P+ L Q L AI R + E ++RI+G R+FY + TLS DT E Sbjct: 36 VTGTTASDRILQPNMCLSSEQLVQLEQAINRRIAGEPVYRIIGTREFYGIPFTLSKDTLE 95 Query: 74 PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133 PRP+TE +VD L +EK + +LD+GTG+GA+ +A+LK+ P V VDIS A Sbjct: 96 PRPDTETVVDLVLPILKTYLEKSEQATLLDMGTGSGAIAIAILKQIPQTYAVAVDISEDA 155 Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPR 193 L+ A NA V+ RF L S+WF SV+G FD+I+SNPPYI + L EVR DP Sbjct: 156 LKTATKNAQHANVAHRFTPLLSNWFDSVKGQFDLIISNPPYIPEKEIKNLAKEVRQHDPL 215 Query: 194 ISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDY 253 +L GG DGL YR +A + +L + +VEIGY+Q+ +V +F+ + +D Sbjct: 216 RALIGGKDGLDFYRKLAHESANYLKEKSYIAVEIGYSQEKEVCDLFKKNGFKCLKIREDL 275 Query: 254 GGNDRVLLF 262 R LLF Sbjct: 276 NRIPRALLF 284 >gi|121601994|ref|YP_988677.1| HemK family methyltransferase [Bartonella bacilliformis KC583] gi|120614171|gb|ABM44772.1| methyltransferase, HemK family [Bartonella bacilliformis KC583] Length = 288 Score = 190 bits (483), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 106/261 (40%), Positives = 150/261 (57%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 +A D+ + VT S+ I+ PD L +Q L AI R + E HRI+G R+FY Sbjct: 24 EANLDTKLLVEWVTSTSTIDRILQPDMCLSSQQIAQLEEAIKRRISGEPTHRIIGTREFY 83 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 + LS +T EPRP+TE+L+D L +++K +LD+GTGTGA+ +A+LK+ Sbjct: 84 GISFALSKETLEPRPDTEILIDLVLPILKKKVKKSGKATLLDMGTGTGAIAIAILKQVVQ 143 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181 V VDI+ AL+ A NA V RF L S+WF++V G FD+I+SNPPYI + Sbjct: 144 TCAVAVDIAEDALKTATQNAKNADVLHRFTPLLSNWFNTVTGQFDLIISNPPYIPEKDIP 203 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 L EVR +DP +L GG DGL YR +AD + +L ++G +VEIGY+QK +V +FE Sbjct: 204 NLAKEVRQYDPLRALIGGKDGLDFYRKLADESATYLKEEGYIAVEIGYSQKKEVCNLFEK 263 Query: 242 RKLFLVNAFKDYGGNDRVLLF 262 + D G R +LF Sbjct: 264 NGFKCLKIRDDLSGIPRAILF 284 >gi|220920162|ref|YP_002495463.1| modification methylase, HemK family [Methylobacterium nodulans ORS 2060] gi|219944768|gb|ACL55160.1| modification methylase, HemK family [Methylobacterium nodulans ORS 2060] Length = 299 Score = 189 bits (481), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 106/262 (40%), Positives = 155/262 (59%), Gaps = 3/262 (1%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A+RD+ L L S +++ D L+ R+ L+ A++R + E + RILG +F+ Sbjct: 30 AMRDARLLLIETLNLRSIDLVLAGDRELEAREAARLSAALLRRAEGEPVARILGAWEFWG 89 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + LS T PRP+TE +V++ALA L E+ +R+LDLGTG+G + +ALL E P Sbjct: 90 LPFRLSPATLVPRPDTETVVEAALALGL---ERTAPIRLLDLGTGSGCLLVALLSEWPCA 146 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182 G+G+D + +AL A+ NA NGV R +Q DW S+ G FDVIV+NPPYI S ++D Sbjct: 147 TGLGIDRAREALVTARDNADQNGVGARALWVQGDWAGSLRGPFDVIVANPPYIASRMIDG 206 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 L EVR DPR++LDGG DGL YR I + L G VEIGY+Q+ + + E+ Sbjct: 207 LADEVRVHDPRMALDGGSDGLDAYRVILGQAAVLLAPGGRLIVEIGYDQEEALRHLAEAA 266 Query: 243 KLFLVNAFKDYGGNDRVLLFCR 264 +L +V +D G+ R ++ R Sbjct: 267 RLQVVVVRRDLAGHPRAVVMAR 288 >gi|163867490|ref|YP_001608689.1| methylase [Bartonella tribocorum CIP 105476] gi|161017136|emb|CAK00694.1| Methylase [Bartonella tribocorum CIP 105476] Length = 288 Score = 188 bits (478), Expect = 6e-46, Method: Compositional matrix adjust. Identities = 104/263 (39%), Positives = 147/263 (55%) Query: 1 MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60 ++A D+ + +TG+++ I PD L + AI R + E ++RI+G R+F Sbjct: 23 LEADLDAKVLVEWITGINAATRISKPDMHLSSEHIRQIEQAIKRRIAGEPVYRIIGAREF 82 Query: 61 YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120 Y + LS +T EPRP+TE L+D L F +++ LD+GTG+GA+ +A+LK+ P Sbjct: 83 YGISFALSQETLEPRPDTETLIDLVLPFLKKQVKNSKKTTFLDMGTGSGAIAIAILKQIP 142 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180 V VDIS AL+ A NA V RF L SDWF SV FD IVSNPPYI + Sbjct: 143 QSYAVAVDISEDALKTATKNAKNADVIHRFTPLLSDWFDSVTDRFDFIVSNPPYIPEKDI 202 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 + L EVR DP +L GG DGL YR +A + +L ++G +VEIGY+Q+ +V +F+ Sbjct: 203 NKLAKEVRLHDPLRALIGGKDGLDFYRKLAHEAANYLKENGTIAVEIGYSQEKEVCDLFK 262 Query: 241 SRKLFLVNAFKDYGGNDRVLLFC 263 + KD G R LLF Sbjct: 263 KNGFQCLEMRKDLNGIPRALLFA 285 >gi|49475008|ref|YP_033049.1| protoporphyrinogen oxidase protein [Bartonella henselae str. Houston-1] gi|49237813|emb|CAF27008.1| Protoporphyrinogen oxidase protein [Bartonella henselae str. Houston-1] Length = 288 Score = 186 bits (471), Expect = 4e-45, Method: Compositional matrix adjust. Identities = 102/240 (42%), Positives = 138/240 (57%) Query: 23 IVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLV 82 ++ PD L Q L AI R + E ++RI+G R+FY + LS +T EPR +TE LV Sbjct: 45 VLQPDLCLSFEQILQLEKAIQRRIAGEPVYRIIGKREFYGISFALSQETLEPRSDTETLV 104 Query: 83 DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142 D L EK + + +LD+GTG+GA+ +A+LK+ P V VDIS AL+ A NA Sbjct: 105 DLVLPPLKKYGEKSEKITLLDMGTGSGAIAIAILKQIPQSYAVAVDISENALKTATKNAK 164 Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202 + V RF L SDWF SV G FD+I+SNPPYI + L EV DP +L GG DG Sbjct: 165 SAKVINRFTPLLSDWFDSVTGQFDLIISNPPYIPETDITKLAKEVHLHDPLRALIGGKDG 224 Query: 203 LSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262 L YR ++D + +L + G +VEIGY+Q+ +V +FE + KD G R LLF Sbjct: 225 LDFYRKLSDKAANYLKEKGSIAVEIGYSQEKEVCDLFEKNGFKCLEMRKDLNGIPRALLF 284 >gi|49473851|ref|YP_031893.1| protoporphyrinogen oxidase protein [Bartonella quintana str. Toulouse] gi|49239354|emb|CAF25687.1| Protoporphyrinogen oxidase protein [Bartonella quintana str. Toulouse] Length = 288 Score = 182 bits (461), Expect = 5e-44, Method: Compositional matrix adjust. Identities = 101/250 (40%), Positives = 139/250 (55%) Query: 14 VTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFE 73 +TG ++ I+ PD L Q L AI R + E ++RI+G R+FY + LS +T E Sbjct: 36 ITGTNASVRILHPDLCLSFEQITQLEQAIQRRINGEPVYRIIGKREFYGISFALSQETLE 95 Query: 74 PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133 PRP+TE LVD L ++K +LD+GTG+GA+ +A+LK+ P VDIS A Sbjct: 96 PRPDTETLVDLVLPLLKKYVDKLGKTTLLDMGTGSGAIAIAILKQIPQSYATAVDISKDA 155 Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPR 193 L+ A NA V RF L S+WF SV FD+I+SNPPYI + L EVR DP Sbjct: 156 LKTAIKNAKNAKVIHRFTPLLSNWFDSVTDRFDLIISNPPYIPETDIKNLAKEVRLHDPL 215 Query: 194 ISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDY 253 +L GG DGL YR +A + +L G +VEIG++Q+ +V +FE + +D Sbjct: 216 RALIGGKDGLHFYRKLAHEATNYLKTKGSLAVEIGHSQEKEVCDLFEKNGFQFLEMRRDL 275 Query: 254 GGNDRVLLFC 263 G R LLF Sbjct: 276 SGIPRALLFT 285 >gi|254420535|ref|ZP_05034259.1| ribosomal protein L11 methyltransferase [Brevundimonas sp. BAL3] gi|196186712|gb|EDX81688.1| ribosomal protein L11 methyltransferase [Brevundimonas sp. BAL3] Length = 304 Score = 182 bits (461), Expect = 5e-44, Method: Compositional matrix adjust. Identities = 102/257 (39%), Positives = 146/257 (56%), Gaps = 7/257 (2%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L G S ++ DP V+ Q I R LK E + RI+G + F+ + L Sbjct: 39 DARLLLEAAAGASRMDILTDPYRVVTPEQHTAYEAMIDRRLKREPVSRIVGKKGFWKIML 98 Query: 66 TLSSDTFEPRPETELLVDSA-LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 ++ D PRP+TE L+D A LAF+ + +DLGTG+GA+ LALL E P G Sbjct: 99 NVTPDVLSPRPDTETLMDVAMLAFA-----RTQAFSAIDLGTGSGAILLALLAERPAAHG 153 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCL 183 VG DIS +AL +AK NA +++R L+++W + + FD+++SNPPYI + + L Sbjct: 154 VGTDISTEALAVAKENAANLDLNDRAAFLRTEWAAGFGDASFDLVLSNPPYIPTDHIPTL 213 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 EVRD DP ++LDGG DGL YR +A V R L G+ +VEIG++Q V +FE++ Sbjct: 214 DPEVRDHDPHLALDGGPDGLQAYRDLAPEVKRILKPGGVFAVEIGWDQGPQVKALFEAQG 273 Query: 244 LFLVNAFKDYGGNDRVL 260 V KD G DRV+ Sbjct: 274 FADVKVVKDLGERDRVV 290 >gi|302381613|ref|YP_003817436.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Brevundimonas subvibrioides ATCC 15264] gi|302192241|gb|ADK99812.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Brevundimonas subvibrioides ATCC 15264] Length = 294 Score = 181 bits (460), Expect = 6e-44, Method: Compositional matrix adjust. Identities = 102/257 (39%), Positives = 147/257 (57%), Gaps = 7/257 (2%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L +G S ++ DP L Q+ L + R L+ E + RILG + F+ + L Sbjct: 29 DARLLLEAASGASRLDILTDPHRPLTPDQQAALAGYLERRLRREPVSRILGRKGFWKIML 88 Query: 66 TLSSDTFEPRPETELLVDSA-LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 ++ D PRP+TE ++D A LAF E ++DLGTG+GA+ LA+L E P G Sbjct: 89 NVTPDVLSPRPDTETILDVAMLAF-----EPAQAFNVIDLGTGSGAILLAVLSERPGSHG 143 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCL 183 VG DIS +AL +A+ NA G+ R L+++W + + FD++VSNPPYI S + L Sbjct: 144 VGTDISSEALAVARENAANLGLDGRATFLRTEWAAGFGDASFDLVVSNPPYIPSGDIPGL 203 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 EVRD DP ++LDGG DGL YR +A ++R L G+ +VEIG++Q V +FE+ Sbjct: 204 DPEVRDHDPVLALDGGPDGLQAYRDLAPEIARILKPGGVFAVEIGWDQGPQVKALFEAAG 263 Query: 244 LFLVNAFKDYGGNDRVL 260 L V KD G RV+ Sbjct: 264 LTDVKVVKDLGDRHRVV 280 >gi|114704326|ref|ZP_01437234.1| protoporphyrinogen oxidase [Fulvimarina pelagi HTCC2506] gi|114539111|gb|EAU42231.1| protoporphyrinogen oxidase [Fulvimarina pelagi HTCC2506] Length = 298 Score = 181 bits (458), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 106/248 (42%), Positives = 144/248 (58%), Gaps = 7/248 (2%) Query: 17 LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRP 76 L+ + ++PD+ +RF T I R E +HRILG R FY LS+ T EPRP Sbjct: 49 LARRERPIEPDA----EERF--TAYISRRRSGEPVHRILGKRGFYGHDFELSAGTLEPRP 102 Query: 77 ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136 +TE++V+ +AF L +++ +R+LD+GTG+G + L++L P G DIS AL Sbjct: 103 DTEIVVEMGIAF-LRTVDRDRPLRVLDIGTGSGVIALSILVALPHTHAFGTDISEDALAT 161 Query: 137 AKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL 196 A+ NA V RF+T +D+ + + G D+ +SNPPYI + + L EVRDFDP+ +L Sbjct: 162 ARRNAKRLKVDARFETSVTDYAAGITGPLDLAISNPPYIATRDIAGLSSEVRDFDPKSAL 221 Query: 197 DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGN 256 DGG DGL YR IA V L DG VEIG +QK V RIFE+ L + KDYGG Sbjct: 222 DGGEDGLKAYRAIAAQVRSVLADDGSVVVEIGIDQKDPVTRIFEACGFTLSDWRKDYGGI 281 Query: 257 DRVLLFCR 264 R L F R Sbjct: 282 VRALRFSR 289 >gi|115522191|ref|YP_779102.1| HemK family modification methylase [Rhodopseudomonas palustris BisA53] gi|115516138|gb|ABJ04122.1| modification methylase, HemK family [Rhodopseudomonas palustris BisA53] Length = 313 Score = 178 bits (451), Expect = 8e-43, Method: Compositional matrix adjust. Identities = 100/250 (40%), Positives = 142/250 (56%), Gaps = 1/250 (0%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ + V GL Q+++ + VL Q L + R + E + RILG ++F+ + L Sbjct: 53 DARLLVGEVAGLDLTQLVLAAERVLTPEQAIRLEDFARRRIAGEPVARILGHQEFWGLTL 112 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 LS DT PRP+TE +V++AL + + R +RI DLGTGTGA+ LALL E P +GV Sbjct: 113 QLSPDTLVPRPDTETMVEAALDLARDWTD-RAALRIADLGTGTGAILLALLSEWPNARGV 171 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185 D+SC+AL A+ NA G+ R + D+ ++++G FD+IVSNPPYI + + L + Sbjct: 172 ATDLSCEALRTARGNADRLGLGARTRFVACDYAAALKGPFDLIVSNPPYIPAAEIATLAV 231 Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245 EV D DPR +LDGG DGL YR IA + L+ G VE+G Q V + + L Sbjct: 232 EVSDHDPRRALDGGDDGLDAYRAIAPQAAALLSPGGALIVEVGQGQSEPVAGLMAASGLT 291 Query: 246 LVNAFKDYGG 255 L D GG Sbjct: 292 LDAPRPDLGG 301 >gi|170746588|ref|YP_001752848.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Methylobacterium radiotolerans JCM 2831] gi|170653110|gb|ACB22165.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Methylobacterium radiotolerans JCM 2831] Length = 299 Score = 176 bits (447), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 106/263 (40%), Positives = 144/263 (54%), Gaps = 3/263 (1%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 +A D+ L + GL + +++D L L A+ R L E + RILG +F+ Sbjct: 29 EAAGDARFLLLGILGLETRDLLIDGSRRLGPADAASLAAALARRLAGEPVARILGAWEFW 88 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 + L DT PRP+TE+LV+ ALA R ++ +R LDLGTG+G + ALL E P Sbjct: 89 GLPFRLGPDTLVPRPDTEILVEVALAA---RPDRAAPLRCLDLGTGSGCILTALLSERPR 145 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181 GVG+D S AL +A+ NAVTNGV +R + DW ++ G FD++VSNPPYI ++ Sbjct: 146 ATGVGLDRSEGALRVARDNAVTNGVGDRARFVAGDWCDALWGCFDLVVSNPPYIARAVIG 205 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 L EVR DP +LDGG DGL YR I G L GL +EIGY+Q V + + Sbjct: 206 TLEREVRGHDPAAALDGGADGLEAYRRILGGAGACLATGGLLVLEIGYDQAAAVTDLARA 265 Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264 +D G+DRVL F R Sbjct: 266 AGYRARGLTRDLAGHDRVLSFDR 288 >gi|92116090|ref|YP_575819.1| HemK family modification methylase [Nitrobacter hamburgensis X14] gi|91798984|gb|ABE61359.1| [protein release factor]-glutamine N5-methyltransferase [Nitrobacter hamburgensis X14] Length = 317 Score = 176 bits (445), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 98/218 (44%), Positives = 128/218 (58%), Gaps = 1/218 (0%) Query: 44 RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103 R L E + RILG +DF+ + L LS+DT PRP+TE +V++AL R +RI D Sbjct: 93 RRLAGEPVARILGTKDFWGLPLKLSADTLVPRPDTETVVEAALEILRAEGRTRTPLRIAD 152 Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG 163 LGTG+GA+ LALL E P GVG D+S AL+ AK+NA G++ R D SD+ + Sbjct: 153 LGTGSGAILLALLSELPDATGVGTDLSAAALDTAKANAQRLGLAPRADFTVSDYAGGLSD 212 Query: 164 LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223 FD+IVSNPPYI S + L EVRD DP ++LDGG DGL YR IA + L GL Sbjct: 213 PFDLIVSNPPYIRSADIASLAPEVRDHDPHLALDGGSDGLEAYRRIAPQAAGLLAPGGLL 272 Query: 224 SVEIGYNQKVDVVRIFESRKLFLVN-AFKDYGGNDRVL 260 +E+G Q DVVR+ + L + A D G R + Sbjct: 273 VLEVGQGQDGDVVRLVAAAGLTVAGPARADLAGIGRAV 310 >gi|163759876|ref|ZP_02166960.1| putative methyltransferase protein [Hoeflea phototrophica DFL-43] gi|162282834|gb|EDQ33121.1| putative methyltransferase protein [Hoeflea phototrophica DFL-43] Length = 294 Score = 174 bits (442), Expect = 8e-42, Method: Compositional matrix adjust. Identities = 104/258 (40%), Positives = 145/258 (56%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ + R+ L+SHQ+ + D L D R + A L + +HRILG RDFY + L Sbjct: 35 DARLLISRLADLASHQLATNGDLPLTDAVRGKIERAAGERLAGKPVHRILGTRDFYGLSL 94 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 LS T EPRP+TE L+D+ L F R+ + I+DLG G G + LAL+ E + + Sbjct: 95 KLSGATLEPRPDTETLIDAVLPFVHDRVVQTGCCEIVDLGIGAGGIGLALVAECTQARCL 154 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185 G+D+S +A+ A +NA G+S R+ + DWF VE FD+IVSNPPYI + + L Sbjct: 155 GIDVSLEAVTTALTNARELGLSARYSAVTGDWFRGVEQHFDLIVSNPPYIPTADIASLSR 214 Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245 EV DP ++LDGG DGL YR IA L G ++EIG Q+ V +F +++ Sbjct: 215 EVVAHDPLLALDGGKDGLDAYRQIAAQCRTRLKSGGQVALEIGVGQRKSVTELFVAQRFE 274 Query: 246 LVNAFKDYGGNDRVLLFC 263 L D GG DRVL+F Sbjct: 275 LSQVVADLGGVDRVLVFA 292 >gi|295690768|ref|YP_003594461.1| protein-(glutamine-N5) methyltransferase [Caulobacter segnis ATCC 21756] gi|295432671|gb|ADG11843.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Caulobacter segnis ATCC 21756] Length = 289 Score = 172 bits (437), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 95/259 (36%), Positives = 145/259 (55%), Gaps = 11/259 (4%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L G++ +++ DP L Q L + R + E + I+G + F+ + L Sbjct: 27 DARLMLEVAAGVTRTEIVTDPYRELTAEQAAMLDEFLTRRARREPVSHIIGRKGFWKILL 86 Query: 66 TLSSDTFEPRPETELLVDSAL-AF--SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 ++ + PRPETE++VD L AF ++P +LDLG G+G + LA+L E P Sbjct: 87 QVNKNVLTPRPETEVIVDEVLKAFPEAMP-------FSMLDLGVGSGTILLAVLAERPAA 139 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVD 181 KG+GVD S +AL +A+ NA ++ R L DW + + + FD++ SNPPYI S +++ Sbjct: 140 KGLGVDASSEALAVARDNAANLDLNNRATFLHGDWTAGLADASFDLVASNPPYIPSAVIE 199 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 L EVRD +PR++LDGG DGL YR +A + R L G+ +VEIGY+Q V +F + Sbjct: 200 TLEPEVRDHEPRLALDGGADGLDAYRLLAPEILRVLKPGGMFAVEIGYDQSKAVESLFNA 259 Query: 242 RKLFLVNAFKDYGGNDRVL 260 V KD +DRV+ Sbjct: 260 AGAQQVRTTKDLSTHDRVV 278 >gi|83592090|ref|YP_425842.1| modification methylase HemK [Rhodospirillum rubrum ATCC 11170] gi|83575004|gb|ABC21555.1| Modification methylase HemK [Rhodospirillum rubrum ATCC 11170] Length = 325 Score = 172 bits (435), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 105/260 (40%), Positives = 138/260 (53%), Gaps = 5/260 (1%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 RD+ V GLS V++ D V+ + L I R E + RILG R F+ Sbjct: 46 RDARLLAGHVLGLSPGAVLLADDRVVTPEEAQALEAVIARRETREPVSRILGHRGFWRFD 105 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L L +DT +PRP+TE LV++ LA + + RILDLGTG+G + LALL + P G Sbjct: 106 LALGADTLDPRPDTETLVEAGLA-----VLEGCGGRILDLGTGSGCILLALLADRPGAIG 160 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184 +G+DI+ A+ +A NA G+ R DW ++V G FD+IVSNPPYI S + L Sbjct: 161 LGIDIAPGAVRVALRNARALGLERRALFAVGDWAAAVAGPFDLIVSNPPYIPSADIAALE 220 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 EV FDP +LDGG DGL YR +A V L G+ +VE G Q DV + E L Sbjct: 221 PEVARFDPSRALDGGADGLDPYRILAAQVPALLAPAGVLAVEFGQGQARDVAGLLEVGGL 280 Query: 245 FLVNAFKDYGGNDRVLLFCR 264 KD G +R LL R Sbjct: 281 CPYEIKKDLSGEERCLLARR 300 >gi|91974578|ref|YP_567237.1| HemK family modification methylase [Rhodopseudomonas palustris BisB5] gi|91681034|gb|ABE37336.1| modification methylase, HemK family [Rhodopseudomonas palustris BisB5] Length = 292 Score = 172 bits (435), Expect = 6e-41, Method: Compositional matrix adjust. Identities = 107/257 (41%), Positives = 141/257 (54%), Gaps = 3/257 (1%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ + VTGL +IV + +L Q L + R L E + RILG R+F+ + L Sbjct: 32 DARLLIGEVTGLDLTGLIVQAERLLAPDQAELLDGFVARRLAGEPVARILGAREFWGLPL 91 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 TLS+DT PRP+TE +V+ AL + R E ILD+G G+GA+ LALL E P GV Sbjct: 92 TLSADTLVPRPDTETVVEVALEYL--RAEAPARPLILDIGAGSGAILLALLSECPAAFGV 149 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185 DIS AL A+SNA+ G+S R D+ S++ G FD+IVSNPPYI + + L Sbjct: 150 ATDISLGALRAAQSNAIRLGLSNRAGFAVCDYASALIGPFDLIVSNPPYIPARDIAALDR 209 Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245 EVRD DPR +LDGG DGL YR I R L G VE G Q +V + + L Sbjct: 210 EVRDHDPRRALDGGDDGLDAYRRIVPESMRLLRPGGALVVEFGQGQSDEVAALMRAAGLT 269 Query: 246 LVNAF-KDYGGNDRVLL 261 + +D GG R L+ Sbjct: 270 VSGPPRRDLGGIFRALM 286 >gi|197104293|ref|YP_002129670.1| modification methylase HemK [Phenylobacterium zucineum HLK1] gi|196477713|gb|ACG77241.1| modification methylase HemK [Phenylobacterium zucineum HLK1] Length = 287 Score = 171 bits (434), Expect = 6e-41, Method: Compositional matrix adjust. Identities = 94/245 (38%), Positives = 142/245 (57%), Gaps = 7/245 (2%) Query: 22 VIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELL 81 ++ DP L Q L + + R K E + ILG + F+ + L ++ D PRP+TE + Sbjct: 43 IVTDPYRPLTPEQEARLQDYLARREKREPVSHILGRKGFWKIMLRVTPDVLTPRPDTETV 102 Query: 82 VDSAL-AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140 VD AL AF + +LDLG G+GA+ LA+L E P KG+G+D S +AL +A+ N Sbjct: 103 VDVALKAFP-----EHAPWSVLDLGVGSGAILLAILAERPAAKGLGIDASEEALAVARDN 157 Query: 141 AVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199 A G++ R L+ DW + + + FD++VSNPPYI S +++ L EV+D++PR++L+GG Sbjct: 158 AAALGLAGRTALLRGDWTAGLGDSAFDLVVSNPPYIASDVLETLEPEVKDYEPRLALEGG 217 Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRV 259 DGL YR +A + R L G +VEIGY+QK V +F + V +D DRV Sbjct: 218 ADGLDAYRILAPEIVRVLKPGGRFAVEIGYDQKDAVEALFRAAGAEDVRTIRDLADRDRV 277 Query: 260 LLFCR 264 + + Sbjct: 278 VAGAK 282 >gi|192289041|ref|YP_001989646.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Rhodopseudomonas palustris TIE-1] gi|192282790|gb|ACE99170.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Rhodopseudomonas palustris TIE-1] Length = 289 Score = 171 bits (434), Expect = 7e-41, Method: Compositional matrix adjust. Identities = 99/246 (40%), Positives = 140/246 (56%), Gaps = 2/246 (0%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ + V GL +++ + +L + L + R L+ E + RILG R+F+ + Sbjct: 29 DARLLVGEVAGLDLTGLLIQAERILTAEENEQLQSFAARRLRGEPVARILGMREFWGLPF 88 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 LS+DT PRP+TE +V++ALA R RILD+GTG+GA+ LALL E P GV Sbjct: 89 ELSADTLVPRPDTETIVEAALAILAERSSL--APRILDIGTGSGAILLALLHECPDAVGV 146 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185 DIS AL A+ NA G+++R + D+ S++ G FD+IVSNPPYI + L Sbjct: 147 ATDISLGALRTARGNAQRLGLADRACFVACDYASALRGPFDLIVSNPPYIPGNEIAALDR 206 Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245 EVRD DPR +LDGG DGL YR I R L G+ VEIG Q+ DV + ++ L Sbjct: 207 EVRDHDPRRALDGGADGLDAYRKIIPESVRLLQPGGVLVVEIGQGQEGDVSALMQASGLT 266 Query: 246 LVNAFK 251 + + F+ Sbjct: 267 VSDPFR 272 >gi|146277161|ref|YP_001167320.1| HemK family modification methylase [Rhodobacter sphaeroides ATCC 17025] gi|145555402|gb|ABP70015.1| modification methylase, HemK family [Rhodobacter sphaeroides ATCC 17025] Length = 278 Score = 171 bits (434), Expect = 8e-41, Method: Compositional matrix adjust. Identities = 95/259 (36%), Positives = 143/259 (55%), Gaps = 10/259 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVD-PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 A RD+ + G++ ++ + PD +L + F R+ + + + +I+G R F+ Sbjct: 22 APRDARRLMAHALGIAPDRITLHLPDPLLPEADARFEAALAARTAR-QPVAQIVGERLFW 80 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 ++ DT +PRPETE L+++ALA +LDLGTGTG + + LL E P Sbjct: 81 GRPFRVTRDTLDPRPETECLIEAALAAPF--------ATLLDLGTGTGCIAITLLAERPA 132 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181 +GV D+S AL +A+ NA+ GV++R D +SDWF++V FD+I+SNPPYI + + Sbjct: 133 ARGVATDLSPAALAVAEGNALALGVADRLDCRRSDWFAAVPERFDLILSNPPYIAAHEMA 192 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 L EVR+++PR++L DGL YR I G S HL G +EIG Q DV + S Sbjct: 193 ELAPEVREWEPRMALTPEGDGLDAYRAITAGASAHLAPGGRLLLEIGAGQGADVAGLCAS 252 Query: 242 RKLFLVNAFKDYGGNDRVL 260 L V D G DR++ Sbjct: 253 AGLTEVRILPDLDGRDRLV 271 >gi|221233855|ref|YP_002516291.1| peptide release factor-glutamine N5-methyltransferase [Caulobacter crescentus NA1000] gi|220963027|gb|ACL94383.1| peptide release factor-glutamine N5-methyltransferase [Caulobacter crescentus NA1000] Length = 289 Score = 171 bits (434), Expect = 8e-41, Method: Compositional matrix adjust. Identities = 95/261 (36%), Positives = 146/261 (55%), Gaps = 7/261 (2%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L G++ +++ DP L Q L + + R + E + I+G + F+ + L Sbjct: 27 DARLMLEVAAGVTRTEIVTDPYRELSAEQIATLNDYLERRARREPVSHIIGRKGFWKILL 86 Query: 66 TLSSDTFEPRPETELLVDSAL-AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 ++ + PRPETE++VD L AF + +LDLG G+G + LA+L E P KG Sbjct: 87 QVNKNVLTPRPETEVIVDEVLKAFP-----EHMAFSMLDLGVGSGTILLAVLAERPAAKG 141 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCL 183 +G+D S +AL +A+ NA ++ R L DW + + FD++VSNPPYI + ++D L Sbjct: 142 LGIDASSEALAVARENAANLDLNTRAALLHGDWTTGLGSDSFDLVVSNPPYIPTEVIDTL 201 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 EVR +PR++LDGG DGL+ YR +A + R L GL +VEIGY+Q V +F + Sbjct: 202 EPEVRIHEPRLALDGGPDGLAAYRELAPEILRVLKPGGLFAVEIGYDQSQAVEALFRAAG 261 Query: 244 LFLVNAFKDYGGNDRVLLFCR 264 V KD +DRV+L + Sbjct: 262 ATEVRTVKDLSTHDRVVLGVK 282 >gi|16125128|ref|NP_419692.1| hemK family protein [Caulobacter crescentus CB15] gi|13422136|gb|AAK22860.1| hemK family protein [Caulobacter crescentus CB15] Length = 317 Score = 171 bits (434), Expect = 8e-41, Method: Compositional matrix adjust. Identities = 95/261 (36%), Positives = 146/261 (55%), Gaps = 7/261 (2%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L G++ +++ DP L Q L + + R + E + I+G + F+ + L Sbjct: 55 DARLMLEVAAGVTRTEIVTDPYRELSAEQIATLNDYLERRARREPVSHIIGRKGFWKILL 114 Query: 66 TLSSDTFEPRPETELLVDSAL-AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 ++ + PRPETE++VD L AF + +LDLG G+G + LA+L E P KG Sbjct: 115 QVNKNVLTPRPETEVIVDEVLKAFP-----EHMAFSMLDLGVGSGTILLAVLAERPAAKG 169 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCL 183 +G+D S +AL +A+ NA ++ R L DW + + FD++VSNPPYI + ++D L Sbjct: 170 LGIDASSEALAVARENAANLDLNTRAALLHGDWTTGLGSDSFDLVVSNPPYIPTEVIDTL 229 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 EVR +PR++LDGG DGL+ YR +A + R L GL +VEIGY+Q V +F + Sbjct: 230 EPEVRIHEPRLALDGGPDGLAAYRELAPEILRVLKPGGLFAVEIGYDQSQAVEALFRAAG 289 Query: 244 LFLVNAFKDYGGNDRVLLFCR 264 V KD +DRV+L + Sbjct: 290 ATEVRTVKDLSTHDRVVLGVK 310 >gi|316932076|ref|YP_004107058.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Rhodopseudomonas palustris DX-1] gi|315599790|gb|ADU42325.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Rhodopseudomonas palustris DX-1] Length = 289 Score = 170 bits (431), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 102/248 (41%), Positives = 140/248 (56%), Gaps = 6/248 (2%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ + VTGL ++V + L + L R L E + RILG R+F+ + Sbjct: 29 DARLLVGEVTGLDLTGLLVQAERPLTKDESERLRTFAARRLAGEPVARILGVREFWGLPF 88 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV--RILDLGTGTGAVCLALLKESPFFK 123 LS+DT PRP+TE +VD+ALA + +RD RILD+GTG+GA+ LALL E P Sbjct: 89 ELSADTLVPRPDTETVVDAALAV----LGERDAPAPRILDIGTGSGAILLALLSELPGAG 144 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183 GV DIS AL A+ NA G++ R + D+ S++ G FD+IVSNPPYI + L Sbjct: 145 GVATDISLGALRTARRNAERLGLARRARFVACDYASALSGPFDLIVSNPPYIPVNEIAEL 204 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 EVR+ DPR +LDGG DGL YR I + L DG VEIG Q+ DV + ++ Sbjct: 205 DREVREHDPRRALDGGADGLDAYRKIIPESAGLLQPDGALVVEIGQGQETDVSALMQAAG 264 Query: 244 LFLVNAFK 251 L + + F+ Sbjct: 265 LTVSDPFR 272 >gi|254293183|ref|YP_003059206.1| modification methylase, HemK family [Hirschia baltica ATCC 49814] gi|254041714|gb|ACT58509.1| modification methylase, HemK family [Hirschia baltica ATCC 49814] Length = 288 Score = 170 bits (431), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 96/257 (37%), Positives = 145/257 (56%), Gaps = 7/257 (2%) Query: 4 LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63 LRD+ + G+S+ +I + ++ + + + I R L+ E I RI G R+F+ + Sbjct: 28 LRDARRLMELAAGMSTTDLIAEENTQIPLQISAKFSAFIQRRLEGEPISRIAGRREFWGL 87 Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 ++SD +PRP+TE LV+ L+ K D +LDLGTG+G + L++L E + Sbjct: 88 EFVITSDVLDPRPDTETLVELVLSEW-----KSDYKNVLDLGTGSGCILLSILSEKLSAQ 142 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVD 181 G+G+D S KAL +A NA + +R S+WF ++ E FDVIVSNPPYI S ++ Sbjct: 143 GLGLDQSEKALGVATKNAEKLELKQRARFQNSNWFDALTPEQKFDVIVSNPPYIPSADIE 202 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 L ++V+ +DP +LDGG DG YR I HLNK+GL + E+G+NQ V + E+ Sbjct: 203 VLDIDVKKYDPLSALDGGEDGYDDYRHIISKAKVHLNKNGLIAFEVGFNQAEKVCELLEN 262 Query: 242 RKLFLVNAFKDYGGNDR 258 K +N KD G R Sbjct: 263 EKFIHINVRKDLSGVKR 279 >gi|99080783|ref|YP_612937.1| HemK family modification methylase [Ruegeria sp. TM1040] gi|99037063|gb|ABF63675.1| modification methylase HemK family [Ruegeria sp. TM1040] Length = 278 Score = 170 bits (431), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 99/257 (38%), Positives = 144/257 (56%), Gaps = 10/257 (3%) Query: 5 RDSHSFLCRVTGLSSHQV-IVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63 RD+ L + + +V ++ P+ + + + +R+++ H ++G RDFY Sbjct: 26 RDARVLLAHAARIEAARVTLIAPEELSHEVAERYDQLISLRAIRVPVSH-LVGERDFYGR 84 Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 R +S D +PRPETE L+++ALA R+ LDLG G+G + + LL E + Sbjct: 85 RFKVSGDVLDPRPETETLIEAALAEPFERV--------LDLGVGSGCILVTLLAEQQRAR 136 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183 G+GVD+S A A +NAV + V R D QS+WFS+VEG FD+IVSNPPYI +D L Sbjct: 137 GLGVDLSEAACLQASANAVLHRVEARADIRQSNWFSAVEGQFDLIVSNPPYIALEEMDGL 196 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 EVRD +P+++L G DGLS YR I G++ HL +G VEIG Q V ++ Sbjct: 197 SAEVRDHEPQMALTDGADGLSAYRQICAGLAPHLAANGRVMVEIGPTQGPAVAQMMRETG 256 Query: 244 LFLVNAFKDYGGNDRVL 260 L V+ D G DRV+ Sbjct: 257 LRDVSVLPDLDGRDRVV 273 >gi|39933684|ref|NP_945960.1| modification methylase HemK family [Rhodopseudomonas palustris CGA009] gi|39647530|emb|CAE26051.1| putative protoporphyrinogen oxidase, hemK protein [Rhodopseudomonas palustris CGA009] Length = 289 Score = 170 bits (430), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 100/246 (40%), Positives = 139/246 (56%), Gaps = 2/246 (0%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ + V GL +++ + +L + L + R L E + RILG R+F+ + Sbjct: 29 DARLLVGEVAGLDLTGLLIQAERILTAEENEQLQSLAARRLGGEPVARILGMREFWGLPF 88 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 LS+DT PRP+TE +V++ALA R RILD+GTGTGA+ LALL E P GV Sbjct: 89 ELSADTLVPRPDTETIVEAALAILAERSSL--APRILDIGTGTGAILLALLHECPDAVGV 146 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185 DIS AL A+ NA G+++R + D+ S++ G FD+IVSNPPYI + L Sbjct: 147 ATDISLGALRTARGNAQRLGLADRACFVACDYASALCGPFDLIVSNPPYIPGNEIAALDR 206 Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245 EVRD DPR +LDGG DGL YR I R L G+ VEIG Q+ DV + ++ L Sbjct: 207 EVRDHDPRRALDGGDDGLDAYRKIIPESVRLLQPGGVLVVEIGQGQEGDVSALMQASGLT 266 Query: 246 LVNAFK 251 + + F+ Sbjct: 267 VSDPFR 272 >gi|89054298|ref|YP_509749.1| HemK family modification methylase [Jannaschia sp. CCS1] gi|88863847|gb|ABD54724.1| [protein release factor]-glutamine N5-methyltransferase [Jannaschia sp. CCS1] Length = 276 Score = 169 bits (428), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 98/260 (37%), Positives = 136/260 (52%), Gaps = 9/260 (3%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFL-TNAIVRSLKHESIHRILGWRDF 60 +A R++ +C +SS Q+ D F L A + + +I+G +F Sbjct: 20 EAEREARLLMCHALKISSAQLYARLDETWPTGPPFQLFVEACEARKSRQPLSQIIGEVEF 79 Query: 61 YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120 Y R ++SD PRP+TE LVD AL+ R+ LDLGTG+G V LL E P Sbjct: 80 YGRRFFVNSDVLTPRPDTETLVDQALSGGFERV--------LDLGTGSGCVLATLLAERP 131 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180 GVG D+S ALE+A N GV +R + SDWF +V+G FD+I+SNPPYI + + Sbjct: 132 GSNGVGTDLSQPALEVAARNVARQGVQDRAVLVHSDWFEAVQGQFDLILSNPPYIAAAEM 191 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 L EVRD++P ++L G DGL+ YR I HL G VEIG +Q V +F Sbjct: 192 RGLAPEVRDWEPHVALTPGGDGLTAYRIITAAGPMHLRAGGRLMVEIGLDQGAAVAELFR 251 Query: 241 SRKLFLVNAFKDYGGNDRVL 260 + V +D G+DRV+ Sbjct: 252 AAGFGDVRITQDLSGHDRVV 271 >gi|85713813|ref|ZP_01044803.1| modification methylase HemK [Nitrobacter sp. Nb-311A] gi|85699717|gb|EAQ37584.1| modification methylase HemK [Nitrobacter sp. Nb-311A] Length = 298 Score = 169 bits (427), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 97/222 (43%), Positives = 130/222 (58%), Gaps = 1/222 (0%) Query: 44 RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103 R L E + RILG ++F+ + L LSSDT PR +TE +V++AL + +RI D Sbjct: 70 RRLAGEPLARILGTKEFWGLPLKLSSDTLVPRADTETVVETALDILRAEGRMQAALRIAD 129 Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG 163 LGTG+GA+ LALL E P GVG D+S AL+ AK+NA G++ R L SD+ + + G Sbjct: 130 LGTGSGAILLALLTELPAATGVGTDLSAAALDTAKTNAQDVGLATRAQFLVSDYGNGLSG 189 Query: 164 LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223 FD+IVSNPPYI S + L EVRD DP ++LDGG DGL YR IA L GL Sbjct: 190 PFDLIVSNPPYIRSADIATLAPEVRDHDPPLALDGGRDGLDAYRRIAPQALSLLADGGLL 249 Query: 224 SVEIGYNQKVDVVRIFESRKLFLV-NAFKDYGGNDRVLLFCR 264 +EIG Q V R+ + L ++ +A D G R ++ R Sbjct: 250 VLEIGQGQDSAVSRLMAAAGLTVMGSARTDLAGIGRAVVARR 291 >gi|167644952|ref|YP_001682615.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Caulobacter sp. K31] gi|167347382|gb|ABZ70117.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Caulobacter sp. K31] Length = 285 Score = 169 bits (427), Expect = 5e-40, Method: Compositional matrix adjust. Identities = 96/261 (36%), Positives = 146/261 (55%), Gaps = 7/261 (2%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 Q D+ L ++ +I DP VL + Q L + + R E + I+G + F+ Sbjct: 23 QPAIDARLLLEVAADVTRTDIITDPYRVLTETQMATLNDFLERRAAREPVSHIIGRKGFW 82 Query: 62 NVRLTLSSDTFEPRPETELLVDSAL-AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120 + L ++ + PRPETE++VD L AF ++ +LDLG G+G + LA+L E P Sbjct: 83 KILLQVNKNVLTPRPETEVIVDEVLKAFP-----EQMSFNMLDLGVGSGTILLAVLAERP 137 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVI 179 KG+G+D+S AL +A+ NA + +S R L+ DW + + + FD++VSNPPYI + + Sbjct: 138 AAKGLGIDVSEDALAVARENAASLDLSGRVALLRGDWTNGLGDNGFDLVVSNPPYIATHV 197 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 ++ L EVRD +PR++LDGG DGL YR +A + R L + +VEIGY+Q V +F Sbjct: 198 IETLEPEVRDHEPRLALDGGPDGLDAYRLLAGEILRVLKPGAMFAVEIGYDQSAAVEALF 257 Query: 240 ESRKLFLVNAFKDYGGNDRVL 260 V KD NDRV+ Sbjct: 258 REAGAQNVRTIKDLSVNDRVV 278 >gi|75674574|ref|YP_316995.1| modification methylase HemK [Nitrobacter winogradskyi Nb-255] gi|74419444|gb|ABA03643.1| [protein release factor]-glutamine N5-methyltransferase [Nitrobacter winogradskyi Nb-255] Length = 298 Score = 169 bits (427), Expect = 5e-40, Method: Compositional matrix adjust. Identities = 93/222 (41%), Positives = 131/222 (59%), Gaps = 1/222 (0%) Query: 44 RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103 R L E I RILG ++F+ + L LS+DT PR +TE +V++AL ++ +RI D Sbjct: 70 RRLAGEPIARILGTKEFWGLPLKLSADTLVPRADTETVVEAALGVLRAEGRTQEPLRIAD 129 Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG 163 LGTG+GA+ LALL E P GVG D+S AL+ A++NA G++ R L SD+ + G Sbjct: 130 LGTGSGAILLALLTELPKATGVGTDLSAAALDTARANAQGVGLAARSRFLVSDYADGLSG 189 Query: 164 LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223 FD+IVSNPPYI S + L EVRD DP ++LDGG+DGL YR IA + L GL Sbjct: 190 QFDLIVSNPPYIRSADIPTLAPEVRDHDPHLALDGGLDGLDAYRRIAPRAAALLADGGLL 249 Query: 224 SVEIGYNQKVDVVRIFESRKLFLVNAFK-DYGGNDRVLLFCR 264 +EIG Q V + + L ++ + + D G R ++ + Sbjct: 250 VLEIGQGQGGAVTPLVSAAGLTVMGSVRADLAGIGRAVVAGK 291 >gi|328542098|ref|YP_004302207.1| Protein-(glutamine-N5) methyltransferase, release factor-specific [polymorphum gilvum SL003B-26A1] gi|326411848|gb|ADZ68911.1| Protein-(Glutamine-N5) methyltransferase, release factor-specific [Polymorphum gilvum SL003B-26A1] Length = 281 Score = 168 bits (426), Expect = 6e-40, Method: Compositional matrix adjust. Identities = 95/259 (36%), Positives = 134/259 (51%), Gaps = 4/259 (1%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ GLS +++ D+ +D + + + RILG R+F+ + L Sbjct: 25 DARMLTADAAGLSPGDIVLREDAEVDPAREALARAHVAARCGGTPVGRILGRREFWGLEL 84 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 +LS T EPRP+TE LV++ LA R + D+GTG+GA+ +A+L P V Sbjct: 85 SLSPATLEPRPDTETLVEAVLA----RAGGEAAPVLADIGTGSGAIAIAVLTALPEACAV 140 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185 DIS +AL A++NA+ +GV R +Q + + + FD IVSNPPYI S VD L Sbjct: 141 ATDISLEALATARANALRHGVDGRMLFVQGSYGAPLGAGFDWIVSNPPYIASAEVDRLAR 200 Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245 EVR+ DPR +LDGG DGL YR I L G +VEIG +Q +V + F Sbjct: 201 EVREHDPRRALDGGADGLDAYRAIVPAARHSLRPGGRLAVEIGADQGAEVAELMAENGFF 260 Query: 246 LVNAFKDYGGNDRVLLFCR 264 V +D G RV+ CR Sbjct: 261 DVEIIRDLAGRPRVVSGCR 279 >gi|325578169|ref|ZP_08148304.1| protein methyltransferase HemK [Haemophilus parainfluenzae ATCC 33392] gi|325159905|gb|EGC72034.1| protein methyltransferase HemK [Haemophilus parainfluenzae ATCC 33392] Length = 292 Score = 168 bits (426), Expect = 6e-40, Method: Compositional matrix adjust. Identities = 104/265 (39%), Positives = 153/265 (57%), Gaps = 12/265 (4%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L TG S Q++ ++ +D++ R LT + R LK E I ILG ++F+++ L Sbjct: 26 DALVLLQHATGKSRTQILAFDETEIDEKVRLKLTALLDRRLKGEPIAYILGEKEFWSLPL 85 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALLKE-SPFFK 123 +S T PRP+TE+LV+ AL +L ++E+ RILDLGTGTGA+ LAL E SP + Sbjct: 86 NVSEGTLIPRPDTEILVEKALHIALEKLEENPPHFRILDLGTGTGAIALALASELSPICQ 145 Query: 124 G-------VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE 176 +GVD+ + +++A+SNA N + +F LQS WF +VEG FD+IVSNPPYI+ Sbjct: 146 KKHIQLDVIGVDLMPEVVKLAQSNAEKNQLKVQF--LQSRWFENVEGQFDIIVSNPPYID 203 Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236 +VR F+PR +L G +GL+ R + + HL +G +E G+ Q +V Sbjct: 204 EADEHLFQGDVR-FEPRSALVAGENGLADLRHLIEYAPGHLKDNGYLLLEHGWKQGEEVR 262 Query: 237 RIFESRKLFLVNAFKDYGGNDRVLL 261 IF V +DYG N+RV L Sbjct: 263 SIFWQNHWQGVATIRDYGDNERVTL 287 >gi|119383646|ref|YP_914702.1| HemK family modification methylase [Paracoccus denitrificans PD1222] gi|119373413|gb|ABL69006.1| [protein release factor]-glutamine N5-methyltransferase [Paracoccus denitrificans PD1222] Length = 275 Score = 168 bits (425), Expect = 7e-40, Method: Compositional matrix adjust. Identities = 103/260 (39%), Positives = 133/260 (51%), Gaps = 35/260 (13%) Query: 26 PDSVLDDRQ---------RFFLTNAIVRSLKHESIHR----------------ILGWRDF 60 P + D RQ R LT A+ L E++ R ILG R F Sbjct: 20 PGAAEDARQLLAHALELPRHHLTAALAMPLPPEALRRFDASLAARAARQPVSQILGRRAF 79 Query: 61 YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120 + ++ DT +PRPETE LV++AL +LDLGTGTGA+ ++LL E P Sbjct: 80 WKHEFRVTRDTLDPRPETETLVEAAL--------TEPFASVLDLGTGTGAILISLLAERP 131 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180 +G+G DIS ALE+A+ NA GV F L+S+WF+SV G FD+IVSNPPYI + Sbjct: 132 AARGLGTDISPAALEVARENATRIGVCADF--LESNWFASVAGQFDLIVSNPPYIALEEM 189 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 L EVR+++PR +L DGLS YR IA G HL G VEIG Q V + Sbjct: 190 AGLSPEVREWEPRAALTDEADGLSAYRAIAAGAPAHLLPGGRLMVEIGPTQGAAVAALMR 249 Query: 241 SRKLFLVNAFKDYGGNDRVL 260 + L D G DRV+ Sbjct: 250 AVGLAEPRILPDLDGRDRVV 269 >gi|301156076|emb|CBW15547.1| N5-glutamine methyltransferase, modifies release factors RF-1 and RF-2 [Haemophilus parainfluenzae T3T1] Length = 292 Score = 167 bits (424), Expect = 9e-40, Method: Compositional matrix adjust. Identities = 105/265 (39%), Positives = 151/265 (56%), Gaps = 12/265 (4%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L TG S Q++ ++ +D++ R LT + R LK E I ILG ++F+++ L Sbjct: 26 DALVLLQHATGKSRTQILAFDETEIDEKVRLKLTALLDRRLKGEPIAYILGEKEFWSLSL 85 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALLKE-SPFFK 123 +S T PRP+TE+LV+ AL +L ++E+ RILDLGTGTGA+ LAL E SP + Sbjct: 86 NVSEGTLIPRPDTEILVEKALQIALEKLEENPPHFRILDLGTGTGAIALALASELSPICQ 145 Query: 124 G-------VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE 176 +GVD+ + +E+A+SNA N + +F LQS WF VE FD+IVSNPPYI+ Sbjct: 146 KKNIQLDVIGVDLMPEVVELAQSNAEKNQLKVQF--LQSRWFEHVEVQFDIIVSNPPYID 203 Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236 +VR F+PR +L G +GL+ R + + HLN G +E G+ Q +V Sbjct: 204 ETDEHLFQGDVR-FEPRSALVAGENGLADLRHLIEYAPGHLNDGGYLLLEHGWKQGEEVR 262 Query: 237 RIFESRKLFLVNAFKDYGGNDRVLL 261 IF V +DYG N+RV L Sbjct: 263 SIFWQNHWQGVATIRDYGDNERVTL 287 >gi|304394128|ref|ZP_07376051.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Ahrensia sp. R2A130] gi|303293568|gb|EFL87945.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Ahrensia sp. R2A130] Length = 283 Score = 167 bits (424), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 96/257 (37%), Positives = 131/257 (50%), Gaps = 5/257 (1%) Query: 7 SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66 + + + VTG + V+V D + N + + + R +G R+F+ + Sbjct: 30 ARAIMAHVTGDDAGMVMVREDVAFNAADAAVFQNLVQKVASGTPLFRAIGVREFHGLDFA 89 Query: 67 LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126 LS DT EPR +TE L+++ L+ S P R DLGTG+G V ++LL E V Sbjct: 90 LSKDTLEPRDDTEALIEAVLSQSPPAKS-----RFSDLGTGSGIVAISLLHELSEATAVA 144 Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLE 186 DIS AL+ A +NA NGV ER T Q W +EG FD +VSNPPYI S IVD L Sbjct: 145 TDISAGALQTATANAARNGVGERLSTAQGSWCEPLEGAFDFMVSNPPYIASDIVDGLDQS 204 Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246 V D DPR +LDGG GL YR I L G ++EIGY+Q V + + Sbjct: 205 VLDHDPRRALDGGETGLEAYREILSQAGSLLRPGGFLALEIGYDQAEAVTALAQQTGWRR 264 Query: 247 VNAFKDYGGNDRVLLFC 263 + + D G+DR L+F Sbjct: 265 LALYHDLQGHDRALVFA 281 >gi|85705323|ref|ZP_01036422.1| Putative methylase [Roseovarius sp. 217] gi|85670196|gb|EAQ25058.1| Putative methylase [Roseovarius sp. 217] Length = 285 Score = 167 bits (422), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 89/219 (40%), Positives = 122/219 (55%), Gaps = 7/219 (3%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101 I R + + +ILG R F+ +++D +PRPETE L+ ALA P + + Sbjct: 61 IARRMARAPVAKILGRRVFWGREFEVTADVLDPRPETECLIAEALAGPKP-------LTL 113 Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 LDLGTG+G + + LL E P +GV +D+S +AL++A NA +GV +R SDWF+ + Sbjct: 114 LDLGTGSGILAVTLLAEWPGVRGVALDLSAEALDVAARNAARHGVRDRLSLCHSDWFAQI 173 Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221 G FD+IVSNPPYI + L EVRD DPR++L DGL+ YR IA HLN G Sbjct: 174 TGAFDLIVSNPPYIGRDEMVGLMPEVRDHDPRMALTDEGDGLTAYRVIAGAAGAHLNPGG 233 Query: 222 LCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 VEIG+ Q V + + V D G DRV+ Sbjct: 234 RLMVEIGWTQGAAVADLLRAAGFEAVAVLPDLEGRDRVV 272 >gi|323142097|ref|ZP_08076945.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Phascolarctobacterium sp. YIT 12067] gi|322413484|gb|EFY04355.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Phascolarctobacterium sp. YIT 12067] Length = 307 Score = 166 bits (421), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 100/261 (38%), Positives = 142/261 (54%), Gaps = 4/261 (1%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ LC V ++ + D L + +R + + + R KHE + I+G R F Sbjct: 30 DAEVLLCAVLKCERIKLYTEFDKPLSEEERDKMRSYVERRAKHEPLAYIIGERAFMRNNF 89 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 ++ T PRPETELLV+S L + P + V+ LD+GTG+GA+ ++LL P GV Sbjct: 90 KVTPATLVPRPETELLVES-LVKAAPMLRADGAVKALDIGTGSGAIIVSLLDYLPAAVGV 148 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS--VEGLFDVIVSNPPYIESVIVDCL 183 GVDIS +AL +AK NA GV +R QSD FS+ VE FD+IVSNPPYI + + L Sbjct: 149 GVDISNEALAVAKENAAAIGVDKRVAFRQSDLFSNVPVEKKFDIIVSNPPYIPAADIATL 208 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 +V+ +PR +LDGG DGL YR I + HL +DGL + EIG +Q V ++ Sbjct: 209 AQDVQQ-EPRTALDGGADGLDFYRRICAEAAEHLAEDGLLAFEIGIDQSEAVQKLCLEHG 267 Query: 244 LFLVNAFKDYGGNDRVLLFCR 264 DY G R++ + Sbjct: 268 FAKTAVRMDYAGIPRMIFALK 288 >gi|84686943|ref|ZP_01014827.1| Putative methylase [Maritimibacter alkaliphilus HTCC2654] gi|84665140|gb|EAQ11620.1| Putative methylase [Rhodobacterales bacterium HTCC2654] Length = 279 Score = 166 bits (420), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 98/258 (37%), Positives = 137/258 (53%), Gaps = 7/258 (2%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A RD+ L +V + ++ ++ D + + + R + E + +I+G R F+ Sbjct: 22 AARDAQLLLAQVLRIEVMRLSLERDMQVSPADMLAYEDMLDRRIAREPVSKIIGRRQFWG 81 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 T++ D +PRPETE L+ AL + P RILDLGTG+G + + LL E Sbjct: 82 RDFTVTRDVLDPRPETETLIAEALTGAPPS-------RILDLGTGSGILAITLLAEWREA 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182 V D+S AL++A NA NGV R L SDWF+ V+G FD+IVSNPPYI + + Sbjct: 135 FAVATDLSDPALKVAARNATLNGVDNRLTFLASDWFARVQGRFDLIVSNPPYIAADEMPS 194 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 L EV FDP+++L G DGL YR IA G H++ G VEIG+ Q V IF + Sbjct: 195 LAPEVLGFDPQMALTPGGDGLDPYRKIAAGALAHMDPGGRLLVEIGFRQGRAVSDIFAAA 254 Query: 243 KLFLVNAFKDYGGNDRVL 260 L V D G DRV+ Sbjct: 255 GLDDVRIHPDMDGRDRVI 272 >gi|40062726|gb|AAR37631.1| modification methylase, HemK family [uncultured marine bacterium 438] Length = 280 Score = 166 bits (419), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 88/259 (33%), Positives = 144/259 (55%), Gaps = 4/259 (1%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 DS L VI++P VL+ Q + I R K E I ++ ++F+ Sbjct: 25 DSEILLSNSIKRDKKHVILNPKEVLNSEQLGKFKSLIERRKKGEPIAYLINKKEFWKDEF 84 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 ++ D PRP++EL+++ L K D ++ILD+GTG+G + L++LKE F G Sbjct: 85 FVNKDVLIPRPDSELIIEQVLKI----YSKDDQLQILDIGTGSGCILLSILKERSNFYGT 140 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185 G+DIS K+++++K NA ++ R S + G +D+IVSNPPYIE + + L Sbjct: 141 GIDISKKSIDVSKFNAKQLNLTNRVKFFHSSVDNFNNGKYDIIVSNPPYIEQLCLKYLEK 200 Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245 +V +F+P+++L GG DG S R + + S + K+G +EIG+NQK V++I + + Sbjct: 201 DVVNFEPKLALSGGFDGFSKIRKVINKTSNLIKKNGKFILEIGFNQKNKVIKILKEEGFY 260 Query: 246 LVNAFKDYGGNDRVLLFCR 264 + A KDYG NDR ++ + Sbjct: 261 VNKAIKDYGNNDRCIISTK 279 >gi|254474677|ref|ZP_05088063.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Ruegeria sp. R11] gi|214028920|gb|EEB69755.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Ruegeria sp. R11] Length = 285 Score = 166 bits (419), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 97/257 (37%), Positives = 140/257 (54%), Gaps = 10/257 (3%) Query: 5 RDSHSFLCRVTGLSSHQV-IVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63 RD+ L + + +V ++ P+ + D + +R+++ H ++G R+FY Sbjct: 28 RDARVLLAHAARIEASRVTLIAPEDLDPDVAERYEQLISLRAIRVPVSH-LVGEREFYGR 86 Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 R +SSD +PRPETE L+++ALA R+LDLG G+G + + LL E P Sbjct: 87 RFKVSSDVLDPRPETECLIEAALAEPF--------ARVLDLGLGSGCILVTLLAEQPKAT 138 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183 G+GVD+S A A +NAV + V R D QSDWF+ VEG FD+IVSNPPYI ++ L Sbjct: 139 GLGVDLSEAACLQASANAVLHRVEPRADVRQSDWFAQVEGQFDLIVSNPPYIALDEMEGL 198 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 EVR +P ++L G DGLS YR I+ V+ +L G +EIG Q V + + Sbjct: 199 SAEVRGHEPEMALTDGADGLSAYRAISQQVAEYLAPGGRVLLEIGPTQGAQVAEMLRTAG 258 Query: 244 LFLVNAFKDYGGNDRVL 260 L V D G DRV+ Sbjct: 259 LVDVRVLPDLDGRDRVV 275 >gi|90422035|ref|YP_530405.1| HemK family modification methylase [Rhodopseudomonas palustris BisB18] gi|90104049|gb|ABD86086.1| modification methylase, HemK family [Rhodopseudomonas palustris BisB18] Length = 291 Score = 166 bits (419), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 97/239 (40%), Positives = 133/239 (55%), Gaps = 3/239 (1%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ + V GL ++V +L Q L + R L E + RI+G ++F+ + L Sbjct: 32 DARLLIGAVLGLDLTGLMVGAARLLTPEQASQLDALVTRRLAGEPVARIVGIKEFWGLPL 91 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 L DT PRP+TE +V++AL R + RI DLGTG+GA+ LALL E P GV Sbjct: 92 ALCGDTLVPRPDTETIVEAALQLFAGRPAPQ---RIADLGTGSGAILLALLSEWPQACGV 148 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185 DIS AL A++NA G+ +R + D+ S++ G FD+IVSNPPYI S + L Sbjct: 149 ASDISVAALHTARANAARLGLGDRAAFVACDYASALRGPFDLIVSNPPYIRSADIAALDR 208 Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 EVRD DPR +LDGG DGL+ YRTI + L+ G VEIG Q +V + + L Sbjct: 209 EVRDHDPRRALDGGADGLAAYRTITTQAAGLLSPGGALIVEIGQGQGDEVSALMRAAGL 267 >gi|288956983|ref|YP_003447324.1| HemK protein [Azospirillum sp. B510] gi|288909291|dbj|BAI70780.1| HemK protein [Azospirillum sp. B510] Length = 282 Score = 166 bits (419), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 97/253 (38%), Positives = 142/253 (56%), Gaps = 3/253 (1%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L L+ I + + D+ + + R E + RILG R+F+ + L Sbjct: 25 DARYLLEHALKLTRTDFITKSEQPVPDQDAAHVLTLVERRAAREPVGRILGHREFWTIDL 84 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 L+ DT EPRP+TE +V++ALA ++P +++ +R++D GTGTG + LALL E P GV Sbjct: 85 VLNPDTLEPRPDTETVVEAALA-AIP--DRKAPLRLIDFGTGTGCILLALLSELPNATGV 141 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185 GVD+S A++ A NA NG+++R DW + FD++VSNPPYI S + L Sbjct: 142 GVDLSPLAVQAAAGNAERNGLADRARFQIGDWAKDIRDRFDIVVSNPPYIPSADIAALEP 201 Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245 EVRD DP +LDGG DGL YR +A + R L GL + E+G+ Q DV + E++ + Sbjct: 202 EVRDHDPLRALDGGPDGLEPYRILAAELPRLLLPGGLVAFEVGWGQAEDVAALVEAQGMG 261 Query: 246 LVNAFKDYGGNDR 258 D GG R Sbjct: 262 ETAILCDLGGVKR 274 >gi|114569198|ref|YP_755878.1| HemK family modification methylase [Maricaulis maris MCS10] gi|114339660|gb|ABI64940.1| [protein release factor]-glutamine N5-methyltransferase [Maricaulis maris MCS10] Length = 319 Score = 164 bits (416), Expect = 8e-39, Method: Compositional matrix adjust. Identities = 92/222 (41%), Positives = 134/222 (60%), Gaps = 6/222 (2%) Query: 44 RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103 R L + ++LG + F+ + L +SSD PR +TE LV++ LA + R++D Sbjct: 94 RRLARVPLSQVLGSQPFWTLDLAVSSDVLTPRADTEALVEAVLAEA-----GEASARLVD 148 Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-E 162 LGTG+GA+ LALL E P + G+GVD+S AL IA +NA G++ R + +Q W + + + Sbjct: 149 LGTGSGAILLALLSERPGWSGLGVDLSAPALAIATANADRCGLANRAEFMQGRWGAGLAD 208 Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL 222 G D++VSNPPYI S I+ L EVRD +P ++LDGG+DGL YR I + R L +GL Sbjct: 209 GSVDILVSNPPYIVSDILAGLEPEVRDHEPALALDGGVDGLDAYREIIADLPRLLVSNGL 268 Query: 223 CSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 ++EIG++Q V V + L + D GNDRV+L R Sbjct: 269 FALEIGHDQGVTVSALAREAGLVDIRVLPDLAGNDRVVLGRR 310 >gi|149204049|ref|ZP_01881017.1| Putative methylase [Roseovarius sp. TM1035] gi|149142491|gb|EDM30536.1| Putative methylase [Roseovarius sp. TM1035] Length = 285 Score = 164 bits (416), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 97/258 (37%), Positives = 135/258 (52%), Gaps = 7/258 (2%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A D+ + L GL+ ++ + LD I R E + +ILG R F+ Sbjct: 22 AAGDARALLAGAVGLARDRLTLHLGEDLDAAALARFEAMIARRAAREPVAKILGRRVFWG 81 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 +++D +PRPETE L+ ALA P + +LDLGTG+G + + LL E P Sbjct: 82 REFEVTADVLDPRPETECLIFEALAGPKP-------LTLLDLGTGSGILAVTLLAEWPDA 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182 GV D+S AL++A NA +GV+ R +SDWF+ V G+FD+IVSNPPYI + + Sbjct: 135 GGVATDVSDAALDVATRNAARHGVAGRLTLSRSDWFARVAGVFDLIVSNPPYIAAAEMAG 194 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 L EVR+ DPR +L DGL+ YR IA G HL+ G VEIG+ Q V + + Sbjct: 195 LMPEVREHDPRGALTDEADGLTAYRAIAAGAGAHLSPGGRLMVEIGWKQGPAVADLLCAE 254 Query: 243 KLFLVNAFKDYGGNDRVL 260 V D G DRV+ Sbjct: 255 GFDAVTIRPDLEGRDRVV 272 >gi|259418842|ref|ZP_05742759.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Silicibacter sp. TrichCH4B] gi|259345064|gb|EEW56918.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Silicibacter sp. TrichCH4B] Length = 278 Score = 164 bits (415), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 98/258 (37%), Positives = 143/258 (55%), Gaps = 10/258 (3%) Query: 5 RDSHSFLCRVTGLSSHQV-IVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63 RD+ L + + +V ++ P+ + + + +R+++ H ++G RDFY Sbjct: 26 RDARVLLAHAARIEAARVTLIAPEELSHEVAERYDQLISLRAIRVPVSH-LIGERDFYGR 84 Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 R +S+D +PRPETE L+++AL+ R+ LDLG G+G + + LL E Sbjct: 85 RFKVSADVLDPRPETETLIEAALSEPFERV--------LDLGVGSGCILVTLLAEQQGAL 136 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183 G+GVD+S A A +NAV + V R D QSDWFS+V+G FD+IVSNPPYI +D L Sbjct: 137 GLGVDLSEAACLQACANAVLHRVEARADIRQSDWFSAVKGQFDLIVSNPPYIALNEMDDL 196 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 EVR+ +P+++L G DGLS YR I G+ HL + G VEIG Q V + + Sbjct: 197 SEEVREHEPQMALTDGADGLSAYRLICAGLGCHLAQGGRVLVEIGPTQGAAVAEMMRAAG 256 Query: 244 LFLVNAFKDYGGNDRVLL 261 L V D G DRV+L Sbjct: 257 LVEVTVLPDLDGRDRVVL 274 >gi|294678209|ref|YP_003578824.1| protein methyltransferase HemK [Rhodobacter capsulatus SB 1003] gi|294477029|gb|ADE86417.1| protein methyltransferase HemK [Rhodobacter capsulatus SB 1003] Length = 252 Score = 163 bits (412), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 94/234 (40%), Positives = 127/234 (54%), Gaps = 9/234 (3%) Query: 31 DDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSL 90 +DR + FL R + + + +I G R F+ ++ T +PRPETELLV+ AL + Sbjct: 27 EDRHKQFLKCLAAREAR-QPVAQITGHRAFWKHEFRVTRATLDPRPETELLVEVALETAF 85 Query: 91 PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150 R+LDLGTGTG + L+LL E P +GV DIS AL +A+ NA + ER Sbjct: 86 --------ERVLDLGTGTGCILLSLLAERPAARGVATDISEAALAVAQENAERLSLYERA 137 Query: 151 DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210 +Q DWF VEG FD+IVSNPPYI + L +VRD++P +L G DGL YR IA Sbjct: 138 HFVQGDWFHGVEGRFDLIVSNPPYITEAEMAELAPDVRDWEPHTALTPGGDGLGAYRAIA 197 Query: 211 DGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 G L G ++EIG Q V + ++ V +D G DRV+L R Sbjct: 198 FGAFARLKPGGRIALEIGPTQAAAVSAMLTAQGFADVEVRQDLGHRDRVVLAHR 251 >gi|300025030|ref|YP_003757641.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Hyphomicrobium denitrificans ATCC 51888] gi|299526851|gb|ADJ25320.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Hyphomicrobium denitrificans ATCC 51888] Length = 295 Score = 162 bits (411), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 95/258 (36%), Positives = 141/258 (54%), Gaps = 2/258 (0%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A RD+ L + G+ ++ P+ L D+ + +A+ R L HE + RILG R+FY Sbjct: 34 APRDARLLLQGLLGIDGTALLTRPEQPLGDKA-ALIGDAVRRRLAHEPVTRILGVREFYG 92 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 ++ D +PRP+TE +V+ AL ++I D+GTG+G + LL E P Sbjct: 93 REFIVTPDVLDPRPDTETVVELALEIVRANGLTSAPLQIADIGTGSGILIATLLLELPNA 152 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182 +GV DIS AL +A+ NA G+++R + + G FD+IVSNPPYI + Sbjct: 153 RGVATDISTAALAVAERNAKRLGLADRTSFVATHSLDGCAGPFDLIVSNPPYIREADIPG 212 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 L EVRD+DP+++LDGG DGL YR IA V+R+ + +E+G Q DV IF + Sbjct: 213 LEPEVRDYDPQLALDGGADGLDVYREIAK-VARNPLRPMRLVLEVGAGQASDVTDIFRAA 271 Query: 243 KLFLVNAFKDYGGNDRVL 260 + KD GG+DR + Sbjct: 272 GWRPLGRQKDLGGHDRAV 289 >gi|254485503|ref|ZP_05098708.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Roseobacter sp. GAI101] gi|214042372|gb|EEB83010.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Roseobacter sp. GAI101] Length = 271 Score = 162 bits (410), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 95/257 (36%), Positives = 141/257 (54%), Gaps = 10/257 (3%) Query: 5 RDSHSFLCRVTGLSSHQV-IVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63 RD+ L + + +V ++ P+ + + F T +R+++ H ++G R FY Sbjct: 18 RDARILLAHAASVDASRVTLIAPEEIAPEIAERFETLIALRAVRVPVSH-LVGQRAFYGR 76 Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 +S D +PRPETE L++ AL+ E D V +DLGTG+G + + LL E P + Sbjct: 77 DFKISRDVLDPRPETETLIELALS------EAFDTV--MDLGTGSGCILVTLLAERPEAR 128 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183 G+G+D+S A A +NAV +GV+ R D QSDWF++ EG FD+IV+NPPY+ + + Sbjct: 129 GLGLDLSEAACLQASANAVLHGVAARADIRQSDWFAAAEGRFDLIVANPPYLAKSEMAGV 188 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 E+R +P ++L G+DGLS YR IA +L G EIG+ Q DV +IF Sbjct: 189 APELRLHEPEMALTDGLDGLSAYRVIASQAQGYLTATGRVLAEIGWQQGPDVAQIFRDAG 248 Query: 244 LFLVNAFKDYGGNDRVL 260 V D G DRVL Sbjct: 249 WGRVRILPDLDGRDRVL 265 >gi|126739407|ref|ZP_01755100.1| modification methylase, HemK family protein [Roseobacter sp. SK209-2-6] gi|126719507|gb|EBA16216.1| modification methylase, HemK family protein [Roseobacter sp. SK209-2-6] Length = 287 Score = 162 bits (410), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 96/258 (37%), Positives = 139/258 (53%), Gaps = 10/258 (3%) Query: 5 RDSHSFLCRVTGLSSHQV-IVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63 RD+ L + + +V ++ P+ + + + +R+++ H ++G R+FY Sbjct: 34 RDARILLAHAARIEASRVTLIAPEELEPEVAERYEQLISLRAIRVPVSH-LIGEREFYGR 92 Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 R +S D +PRPETE L+++ALA + R+LDLG G+G + + LL E P Sbjct: 93 RFKVSGDVLDPRPETECLIEAALA--------QPFERVLDLGLGSGCILVTLLAEQPKAS 144 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183 G GVD+S A A +NAV + V ER D QSDWFS+V G FD++VSNPPYI + L Sbjct: 145 GFGVDLSEAACLQASANAVLHRVEERIDIQQSDWFSNVTGQFDLVVSNPPYIALPEMQDL 204 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 EVR +P ++L G DGL YR IA V HL G +EIG +Q DV + Sbjct: 205 SPEVRSHEPEMALTDGGDGLGAYRQIAASVREHLLPGGRLLLEIGPSQGRDVTALLAEAG 264 Query: 244 LFLVNAFKDYGGNDRVLL 261 L + D G DRV++ Sbjct: 265 LLEIRVLPDLDGRDRVVV 282 >gi|90420192|ref|ZP_01228100.1| putative hemK modification methylase involved in heme biosynthesis [Aurantimonas manganoxydans SI85-9A1] gi|90335526|gb|EAS49276.1| putative hemK modification methylase involved in heme biosynthesis [Aurantimonas manganoxydans SI85-9A1] Length = 298 Score = 162 bits (410), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 87/221 (39%), Positives = 125/221 (56%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101 + R E +HRI+G R FY LS +T EPRP+TE+LV+ A + ++ Sbjct: 68 LARRAAGEPVHRIIGRRAFYEHDFVLSPETLEPRPDTEVLVEEAREAMAAIVARKGRCVF 127 Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 D+GTGTGA+ ++LL + V +DIS AL A+ NA+ GV++R +++++ ++ Sbjct: 128 ADVGTGTGAIAVSLLALFAEAEAVALDISDGALRTARRNAIVAGVADRMLAVRANYLDAI 187 Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221 G +++VSNPPYI + L EVRD DP ++LDGG DGL YR +A G R + G Sbjct: 188 GGPLELVVSNPPYIPHDDIAALSREVRDHDPLLALDGGADGLDAYRALATGARRVVRPQG 247 Query: 222 LCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262 L VEIG Q+ DV IF + L +D GG RVL Sbjct: 248 LVIVEIGVGQERDVAAIFAAEGFILDAETRDLGGVIRVLTL 288 >gi|86138686|ref|ZP_01057259.1| modification methylase, HemK family protein [Roseobacter sp. MED193] gi|85824746|gb|EAQ44948.1| modification methylase, HemK family protein [Roseobacter sp. MED193] Length = 284 Score = 162 bits (410), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 98/261 (37%), Positives = 141/261 (54%), Gaps = 11/261 (4%) Query: 5 RDSHSFLCRVTGLSSHQV-IVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63 RD+ L + + +V ++ P+ + + + +R+++ H +LG R+FY Sbjct: 31 RDARILLAHAARIEASRVTLIAPEDLEPEVAERYEQLIALRAIRVPVSH-LLGEREFYGR 89 Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 R +S D +PRPETE L+++ALA R+ LDLG G+G + + LL ESP Sbjct: 90 RFKVSKDVLDPRPETETLIEAALAEPFERV--------LDLGLGSGCILVTLLAESPQAT 141 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183 G+GVD+S A A +NA+ + V R D QSDWFS+V G FD+IVSNPPYI + L Sbjct: 142 GLGVDLSEAACLQASANAILHRVESRIDIQQSDWFSNVTGRFDLIVSNPPYIALDEMADL 201 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 EVR +P ++L G DGL+ YR +A GV HL G +EIG Q V + + Sbjct: 202 SPEVRQHEPDMALTDGGDGLAAYRALAAGVRAHLRSGGRLCLEIGPTQGQAVAAMMQEAG 261 Query: 244 LFLVNAFKDYGGNDRVLLFCR 264 L + D G DRV +F R Sbjct: 262 LTNIAVLPDLDGRDRV-VFAR 281 >gi|229844231|ref|ZP_04464372.1| HemK [Haemophilus influenzae 6P18H1] gi|229813225|gb|EEP48913.1| HemK [Haemophilus influenzae 6P18H1] Length = 292 Score = 162 bits (409), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 101/265 (38%), Positives = 153/265 (57%), Gaps = 12/265 (4%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L TG S Q++ D+ +D++ R LT + R LK E I ILG ++F+++ L Sbjct: 26 DALVLLQHATGKSRTQILAFDDTEIDEKVRLKLTALLDRRLKGEPIAYILGEKEFWSLPL 85 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALLKE-SPF-- 121 +S T PRP+TE+LV+ AL +L ++E+ RILDLGTGTGA+ LAL E +P Sbjct: 86 NVSKGTLIPRPDTEILVEKALQIALEKLEENPPHFRILDLGTGTGAIALALASELAPICQ 145 Query: 122 -----FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE 176 + +GVD+ + +A+SNA N ++ +F LQS WF ++ G FD+IVSNPPYI+ Sbjct: 146 KRHIPLEIIGVDLMPDVVALAQSNAERNQLNVQF--LQSRWFDNITGQFDLIVSNPPYID 203 Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236 + +VR F+P +L +G + R I + S +LN +G+ +E G+ Q V Sbjct: 204 AQDEHLHQGDVR-FEPLSALVANDEGYADLRHIIELASSYLNSNGVLLLEHGWQQGEKVR 262 Query: 237 RIFESRKLFLVNAFKDYGGNDRVLL 261 IF+ +V +DYG N+RV L Sbjct: 263 SIFQENHWEMVETVRDYGDNERVTL 287 >gi|83953607|ref|ZP_00962328.1| modification methylase, HemK family protein [Sulfitobacter sp. NAS-14.1] gi|83841552|gb|EAP80721.1| modification methylase, HemK family protein [Sulfitobacter sp. NAS-14.1] Length = 280 Score = 161 bits (408), Expect = 7e-38, Method: Compositional matrix adjust. Identities = 98/257 (38%), Positives = 139/257 (54%), Gaps = 10/257 (3%) Query: 5 RDSHSFLCRVTGLSSHQV-IVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63 RD+ L + + +V ++ P+ + D + +R+++ H ++G R FY Sbjct: 27 RDARILLAHAASVDAARVTLIAPEEIAPDIAERYEKLIALRAVRVPVSH-LVGQRAFYGR 85 Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 +S D +PRPETE L++ LA S P R+LDLGTG+G + + LL E + Sbjct: 86 DFKVSRDVLDPRPETESLIE--LALSEP------FERVLDLGTGSGCILVTLLAEQQDAR 137 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183 GVG+D+S A A +NAV +GV R + QSDWFS+ EG FD+IVSNPPY+ + + Sbjct: 138 GVGLDLSEAACLQASANAVLHGVQARAEITQSDWFSAAEGRFDLIVSNPPYLAQSEMADV 197 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 E+R +P ++L G DGLS YR IA +L G EIG+ Q DV IFE+ Sbjct: 198 SPELRLHEPEMALTDGQDGLSVYRIIAAQAQGYLAPTGRVLAEIGWQQGADVKAIFEAAG 257 Query: 244 LFLVNAFKDYGGNDRVL 260 V D GG DRVL Sbjct: 258 WGRVRILPDLGGRDRVL 274 >gi|91762345|ref|ZP_01264310.1| HemK [Candidatus Pelagibacter ubique HTCC1002] gi|91718147|gb|EAS84797.1| HemK [Candidatus Pelagibacter ubique HTCC1002] Length = 280 Score = 161 bits (408), Expect = 8e-38, Method: Compositional matrix adjust. Identities = 85/259 (32%), Positives = 143/259 (55%), Gaps = 4/259 (1%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 DS L +I++P VL+ Q + I R K E I ++ ++F+ Sbjct: 25 DSEILLSNSIKRDKKHIILNPKEVLNSEQLRKFKSLIERRKKGEPIAYLINKKEFWKDEF 84 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 ++ D PRP++EL+++ L K D +++LD+GTG+G + L++LKE F G Sbjct: 85 FVNKDVLIPRPDSELIIEQVLKI----YSKDDHLQLLDIGTGSGCILLSILKERSNFYGT 140 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185 G+DIS K++ ++K NA ++ R S + G +D++VSNPPYIE + + L Sbjct: 141 GIDISKKSINVSKFNAKQLNLTNRVKFFHSSVDNFNNGKYDIVVSNPPYIEQLSLKYLEK 200 Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245 +V +F+P+++L GG DG S R + + S + K+G +EIG+NQK V++I + + Sbjct: 201 DVVNFEPKLALSGGFDGFSKIRKVINKASILIKKNGKFILEIGFNQKNKVIKILKEEGFY 260 Query: 246 LVNAFKDYGGNDRVLLFCR 264 + A KDYG NDR ++ + Sbjct: 261 VNKAIKDYGNNDRCIISTK 279 >gi|83942387|ref|ZP_00954848.1| modification methylase, HemK family protein [Sulfitobacter sp. EE-36] gi|83846480|gb|EAP84356.1| modification methylase, HemK family protein [Sulfitobacter sp. EE-36] Length = 280 Score = 161 bits (407), Expect = 9e-38, Method: Compositional matrix adjust. Identities = 98/257 (38%), Positives = 140/257 (54%), Gaps = 10/257 (3%) Query: 5 RDSHSFLCRVTGLSSHQV-IVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63 RD+ L + + +V ++ P+ + D + +R+++ H ++G R FY Sbjct: 27 RDARILLAHAASVDAARVTLIAPEEIAPDIAERYEKLIALRAVRVPVSH-LVGQRAFYGR 85 Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 +S D +PRPETE L++ AL+ R E R+LDLGTG+G + + LL E + Sbjct: 86 DFKVSRDVLDPRPETESLIELALS---ERFE-----RVLDLGTGSGCILVTLLAEQQDAR 137 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183 GVG+D+S A A +NAV +GV R + QSDWFS+ EG FD+IVSNPPY+ + + Sbjct: 138 GVGLDLSEAACLQASANAVLHGVQARAEIKQSDWFSAAEGRFDLIVSNPPYLAQSEMADV 197 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 E+R +P ++L G DGLS YR IA +L G EIG+ Q DV IFE+ Sbjct: 198 SPELRLHEPEMALTDGQDGLSVYRIIAAQAQGYLTPTGRVLAEIGWQQGADVKAIFEAAG 257 Query: 244 LFLVNAFKDYGGNDRVL 260 V D GG DRVL Sbjct: 258 WGRVRILPDLGGRDRVL 274 >gi|148258773|ref|YP_001243358.1| putative methyltransferase hemK [Bradyrhizobium sp. BTAi1] gi|146410946|gb|ABQ39452.1| Putative protein methyltransferase hemK modifies release factors RF-1 and RF-2 [Bradyrhizobium sp. BTAi1] Length = 295 Score = 160 bits (406), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 92/239 (38%), Positives = 132/239 (55%), Gaps = 5/239 (2%) Query: 8 HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67 H+ +TGL H L +L + R L E + RILG ++F+ + L L Sbjct: 39 HALQLDLTGLVMHG-----QRALSAADITWLEALMQRRLAGEPVARILGTKEFWGLELHL 93 Query: 68 SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 S+DT PRP+TE +V+ AL + + +RI DLGTG+GA+ LALL E P GVG Sbjct: 94 SADTLVPRPDTETVVELALEHLAAGGDLKRPLRIADLGTGSGAILLALLSELPAAYGVGT 153 Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEV 187 DIS AL+ A+ NA G+ +R + + S++ FD+IVSNPPYI S +D L ++V Sbjct: 154 DISHAALQTARDNARILGLGDRAGFIAGSYASALSPPFDLIVSNPPYIPSREIDDLAIDV 213 Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246 R +DP +LDGG DGL YR + ++ L G VE+G Q DV + + +L + Sbjct: 214 RAYDPLRALDGGADGLDAYRALIPQAAQLLQPGGTLVVEVGQGQSEDVAELMRAARLAI 272 >gi|71083225|ref|YP_265944.1| hypothetical protein SAR11_0519 [Candidatus Pelagibacter ubique HTCC1062] gi|71062338|gb|AAZ21341.1| HemK [Candidatus Pelagibacter ubique HTCC1062] Length = 280 Score = 160 bits (406), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 84/259 (32%), Positives = 143/259 (55%), Gaps = 4/259 (1%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 DS L +I++P VL+ Q + I R K E I ++ ++F+ Sbjct: 25 DSEILLSNSIKRDKKYIILNPKEVLNSEQLRKFKSLIERRKKGEPIAYLINKKEFWKDEF 84 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 ++ D PRP++EL+++ L K D +++LD+GTG+G + L++LKE F G Sbjct: 85 FVNKDVLIPRPDSELIIEQVLKI----YSKDDHLQLLDIGTGSGCILLSILKERSNFYGT 140 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185 G+DIS K++ ++K NA ++ R S + G +D++VSNPPYIE + + L Sbjct: 141 GIDISKKSINVSKFNAKQLNLTNRVKFFHSSVDNFNNGKYDIVVSNPPYIEQLSLKYLEK 200 Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245 +V +F+P+++L GG DG S R + + + + K+G +EIG+NQK V++I + + Sbjct: 201 DVVNFEPKLALSGGFDGFSKIRKVINKTNNLIKKNGKFILEIGFNQKNKVIKILKEEGFY 260 Query: 246 LVNAFKDYGGNDRVLLFCR 264 + A KDYG NDR ++ + Sbjct: 261 VNKAIKDYGNNDRCVISTK 279 >gi|83951818|ref|ZP_00960550.1| modification methylase, HemK family protein [Roseovarius nubinhibens ISM] gi|83836824|gb|EAP76121.1| modification methylase, HemK family protein [Roseovarius nubinhibens ISM] Length = 275 Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 91/220 (41%), Positives = 121/220 (55%), Gaps = 9/220 (4%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101 + R E + ILG R FY ++ D +PRPETE LV +AL + R+ Sbjct: 61 LARRAAREPMSHILGQRQFYGRAFKVTGDVLDPRPETECLVAAAL--------EEGFERV 112 Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 LDLGTG+G + L+LL E +G+G D+S AL++A+ NA G++ R ++DWF V Sbjct: 113 LDLGTGSGCILLSLLAEREGAQGLGADVSAAALDVARENAARLGLASRAAFQEADWFKGV 172 Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221 G +D+IVSNPPYI + L E+ +PR +L DGLS YR IA GV HL G Sbjct: 173 AGQYDLIVSNPPYIGIAEMPELAPEL-AHEPRAALTDEGDGLSAYRAIAAGVLAHLVPGG 231 Query: 222 LCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 VEIG Q DV RIF L V +D G DRV++ Sbjct: 232 RILVEIGRTQGADVARIFAEAGLQAVELRQDLDGRDRVVM 271 >gi|297180645|gb|ADI16855.1| methylase of polypeptide chain release factors [uncultured alpha proteobacterium HF0010_13E22] Length = 296 Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 89/221 (40%), Positives = 130/221 (58%), Gaps = 6/221 (2%) Query: 44 RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103 R L E + RI GWR+F+ +RL L+ T +PRP++E +V +ALA + P R+LD Sbjct: 68 RRLGGEPVSRIRGWREFWTLRLELAPATLDPRPDSETIVAAALAATDPG----KPCRMLD 123 Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS--V 161 LG GTGA+ LA L E P G GVDI+ +A+E A NA NG+S R D + D+ Sbjct: 124 LGCGTGALLLACLSERPDATGTGVDIAGEAVEAATRNAGKNGLSARADFVIGDFSDPDVA 183 Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221 G++D+I+ NPPYI + +D L +EV FDPR++LDGG DGL +R + ++ L++ G Sbjct: 184 PGIYDLILCNPPYIPAGEIDGLAVEVACFDPRLALDGGDDGLDCWRAVLPRIAAGLSRGG 243 Query: 222 LCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262 +EIG Q+ V+ + L + KD+ G R L+ Sbjct: 244 RACLEIGAGQRDAVLGLAARAGLCEIGREKDFAGICRCLVL 284 >gi|260576768|ref|ZP_05844753.1| modification methylase, HemK family [Rhodobacter sp. SW2] gi|259021020|gb|EEW24331.1| modification methylase, HemK family [Rhodobacter sp. SW2] Length = 284 Score = 160 bits (404), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 94/259 (36%), Positives = 137/259 (52%), Gaps = 10/259 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVD-PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 A RD+ L GL ++ + D + D N RS + + + +I G R F+ Sbjct: 24 AARDARHLLAHAMGLPPDRLTLHLADPLTPDAAALLAANLAARS-QRQPVSQITGNRLFW 82 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 ++ D +PRPETE L+ +ALA + R+LDLGTG+G + L LL E P Sbjct: 83 GRNFRVTQDVLDPRPETESLIAAALA--------QPFQRVLDLGTGSGVLLLTLLAERPA 134 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181 G+G+D+S AL +A++NA T ++ R SDW ++V G +D++V+NPPYI + Sbjct: 135 ASGLGIDLSPAALNVAQANAETLSLANRATFALSDWLTAVPGQYDLVVANPPYIAEAEMA 194 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 L EVR ++P ++L G DGL YR IA GV+ HL G VEIG Q V +F + Sbjct: 195 ALAPEVRLWEPHLALTPGGDGLDAYRAIAAGVAPHLAPGGRLLVEIGPTQAQAVSGLFRA 254 Query: 242 RKLFLVNAFKDYGGNDRVL 260 L + D G DRV+ Sbjct: 255 CGLPDIRVLPDLDGRDRVI 273 >gi|260433481|ref|ZP_05787452.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Silicibacter lacuscaerulensis ITI-1157] gi|260417309|gb|EEX10568.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Silicibacter lacuscaerulensis ITI-1157] Length = 281 Score = 160 bits (404), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 95/257 (36%), Positives = 142/257 (55%), Gaps = 10/257 (3%) Query: 5 RDSHSFLCRVTGLSSHQV-IVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63 RD+ L + + +V ++ P+ + + + +R+++ H +LG R+FY Sbjct: 28 RDARVLLAHAARIEASRVTLIAPEELSPEIAERYEQLVSLRAIRVPVSH-LLGEREFYGR 86 Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 R +S D +PRPETE L+++AL+ + R+LDLG G+G + + LL E Sbjct: 87 RFRVSRDVLDPRPETEALIEAALS--------QPFDRVLDLGVGSGCILVTLLAERTSAT 138 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183 G+GVD+S A A +NAVT+GV +R + +SDWF ++ G FD+IVSNPPYI +D L Sbjct: 139 GLGVDLSEAACLQASANAVTHGVQDRAEIQRSDWFENIGGYFDLIVSNPPYIALDEMDGL 198 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 EVR+ +PR++L DGL YR IA G HL G VEIG Q V +F++ Sbjct: 199 SPEVREHEPRLALTDEADGLDAYRRIAAGAPDHLMPGGRILVEIGPTQAKAVSALFDAAG 258 Query: 244 LFLVNAFKDYGGNDRVL 260 L + D G DRV+ Sbjct: 259 LSDIRIIPDLDGRDRVV 275 >gi|254465042|ref|ZP_05078453.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Rhodobacterales bacterium Y4I] gi|206685950|gb|EDZ46432.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Rhodobacterales bacterium Y4I] Length = 283 Score = 160 bits (404), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 97/257 (37%), Positives = 139/257 (54%), Gaps = 10/257 (3%) Query: 5 RDSHSFLCRVTGLSSHQV-IVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63 RD+ L + + +V ++ P+ + + + +R+++ H ++G R+FY Sbjct: 26 RDARVLLAHAARIEASRVTLIAPEELAPEVAERYEQLIALRAVRVPVSH-LIGEREFYGR 84 Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 R +S D +PRPETE+L+++ALA R+LDLG G+G + + LL E Sbjct: 85 RFKVSRDVLDPRPETEILIEAALA--------EPYSRVLDLGVGSGCILVTLLAERQEAT 136 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183 G+GVDIS A A +NAV + V R D QSDWF VEG FD+IVSNPPYI ++ L Sbjct: 137 GLGVDISEAACLQASANAVLHRVQARADIRQSDWFEGVEGQFDLIVSNPPYIALDEMEGL 196 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 EVR +P I+L G DGL YR IA V+ HL G +EIG +Q V + E Sbjct: 197 SAEVRGHEPGIALTDGGDGLGAYRRIAAQVTGHLAPGGRVLLEIGPSQGRAVSALLEEAG 256 Query: 244 LFLVNAFKDYGGNDRVL 260 L + +D G DRV+ Sbjct: 257 LSGIAVLQDLDGRDRVV 273 >gi|329847925|ref|ZP_08262953.1| protein-glutamine-N5 methyltransferase, release factor-specific [Asticcacaulis biprosthecum C19] gi|328842988|gb|EGF92557.1| protein-glutamine-N5 methyltransferase, release factor-specific [Asticcacaulis biprosthecum C19] Length = 284 Score = 159 bits (403), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 94/260 (36%), Positives = 137/260 (52%), Gaps = 5/260 (1%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L T + +I DP L Q L + + R K E + RILG + F+ + L Sbjct: 27 DARLLLEAATDATRTDIITDPYRELTAEQEDTLNSYLDRRTKREPVARILGRKGFWKLLL 86 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 LS PRPETE++VD L S P D I DLG G+GA+ L++L E P KG+ Sbjct: 87 NLSDHVLIPRPETEVIVDMILKQSQPS----DAFTIADLGIGSGAILLSVLAERPAAKGL 142 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLG 184 G DIS +AL +A+ NA G+ R L++ W S + + FD++ SNPPYI S ++ L Sbjct: 143 GTDISEEALAVARDNAANLGLDGRAAFLRTSWGSGLADASFDIVASNPPYIRSDVIPTLD 202 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 EV++ DP ++LDGG GL+ Y +A + R L G +EIG++Q DV ++ Sbjct: 203 PEVKNHDPHLALDGGPTGLAAYEELAPEIFRLLKPGGRAWLEIGFDQSQDVEKLMNDAGF 262 Query: 245 FLVNAFKDYGGNDRVLLFCR 264 V + D RV+ + Sbjct: 263 LNVATWLDLSNLPRVVTATK 282 >gi|297181090|gb|ADI17289.1| methylase of polypeptide chain release factors [uncultured alpha proteobacterium HF0070_17D04] Length = 296 Score = 159 bits (403), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 96/259 (37%), Positives = 140/259 (54%), Gaps = 6/259 (2%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 DS L GL + + + DD + R L E + RI GWR+F+ +RL Sbjct: 30 DSRLLLGTALGLDRAVLPHETLAGFDDTAAAMFEAFLNRRLGGEPVSRIRGWREFWTLRL 89 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 L+ T +PRP++E +V +ALA + PR R+LDLG GTGA+ LA L E P G Sbjct: 90 ELTPATLDPRPDSETIVAAALAATDPR----KPCRMLDLGCGTGALLLACLSERPDATGT 145 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS--VEGLFDVIVSNPPYIESVIVDCL 183 GVDI+ +A+E A NA NG+S R D + D+ G++D+I+ NPPYI + +D L Sbjct: 146 GVDIAGEAVEAATRNAGKNGLSARADFVIGDFSDPDVAPGIYDLILCNPPYIPAGEIDGL 205 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 +EV FDP ++LDGG DGL +R + ++ L++ G +EIG Q+ V+ + Sbjct: 206 AVEVACFDPHLALDGGDDGLDCWRAVLPRIAASLSRGGRACLEIGAGQEDAVLGLAAKVG 265 Query: 244 LFLVNAFKDYGGNDRVLLF 262 L + KD G R L+ Sbjct: 266 LCEIGREKDLAGICRCLVL 284 >gi|145642041|ref|ZP_01797612.1| HemK [Haemophilus influenzae R3021] gi|145273221|gb|EDK13096.1| HemK [Haemophilus influenzae 22.4-21] Length = 292 Score = 159 bits (402), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 102/265 (38%), Positives = 151/265 (56%), Gaps = 12/265 (4%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L VTG S Q++ D+ +D++ R LT + R LK E I ILG ++F+++ L Sbjct: 26 DALVLLQHVTGKSRTQILAFDDTEIDEKVRLKLTALLDRRLKGEPIAYILGEKEFWSLPL 85 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALLKE-SPF-- 121 +S T PRP+TE+LV+ AL +L ++E+ RILDLGTGTGA+ LAL E P Sbjct: 86 NVSKGTLIPRPDTEILVEKALQIALEKLEENPPHFRILDLGTGTGAIALALASELEPICQ 145 Query: 122 -----FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE 176 + +GVD+ + +A+SNA N ++ F LQS WF ++ G FD+IVSNPPYI+ Sbjct: 146 KRHIPLEIIGVDLMPDVVALAQSNAERNQLNVEF--LQSRWFDNITGKFDLIVSNPPYID 203 Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236 + +VR F+P +L +G + R I + S +LN +G+ +E G+ Q V Sbjct: 204 AQDEHLHQGDVR-FEPLSALVANDEGYADLRHIIELASSYLNSNGVLLLEHGWQQGEKVR 262 Query: 237 RIFESRKLFLVNAFKDYGGNDRVLL 261 IF +V +DYG N+RV L Sbjct: 263 SIFLENYWEMVETVRDYGDNERVTL 287 >gi|16273459|ref|NP_439708.1| hypothetical protein HI1559 [Haemophilus influenzae Rd KW20] gi|260580340|ref|ZP_05848169.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Haemophilus influenzae RdAW] gi|1170230|sp|P45253|HEMK_HAEIN RecName: Full=Protein methyltransferase hemK homolog; AltName: Full=M.HindHemKP gi|1574403|gb|AAC23208.1| hemK protein (hemK) [Haemophilus influenzae Rd KW20] gi|260093017|gb|EEW76951.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Haemophilus influenzae RdAW] Length = 292 Score = 159 bits (402), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 100/265 (37%), Positives = 151/265 (56%), Gaps = 12/265 (4%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L TG S Q++ D+ +D++ R LT + R LK E I ILG ++F+++ L Sbjct: 26 DALVLLQHATGKSRTQILAFDDTEIDEKVRLKLTALLDRRLKGEPIAYILGEKEFWSLPL 85 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALLKE-SPF-- 121 +S T PRP+TE+LV+ AL +L ++E+ RILDLGTGTGA+ LAL E +P Sbjct: 86 NVSKGTLIPRPDTEILVEKALQIALEKLEENPPHFRILDLGTGTGAIALALASELAPICQ 145 Query: 122 -----FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE 176 + +GVD+ + +A+SNA N ++ F LQS WF ++ G FD+IVSNPPYI+ Sbjct: 146 KRHIPLEIIGVDLMSDVVALAQSNAERNQLNVEF--LQSRWFDNITGKFDLIVSNPPYID 203 Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236 + +VR F+P +L +G + R I + S +LN +G+ +E G+ Q V Sbjct: 204 AQDEHLHQGDVR-FEPLSALVANDEGYADLRHIIELASSYLNSNGVLLLEHGWQQGEKVR 262 Query: 237 RIFESRKLFLVNAFKDYGGNDRVLL 261 IF+ +V +DY N+RV L Sbjct: 263 SIFQENHWEMVETVRDYSDNERVTL 287 >gi|299132854|ref|ZP_07026049.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Afipia sp. 1NLS2] gi|298592991|gb|EFI53191.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Afipia sp. 1NLS2] Length = 292 Score = 159 bits (401), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 91/233 (39%), Positives = 131/233 (56%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L V L +I L+ + L + + R + E I RILG ++F+ + Sbjct: 30 DARLLLGDVLQLDLTGLIAAAARTLNANETAALESRVQRRIDGEPIARILGHKEFWGLSF 89 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 TLS T PRP+TE +V++AL D + I D+GTG+GA+ LALL E P +G+ Sbjct: 90 TLSPATLVPRPDTETIVEAALDILKQDGRLNDALHISDIGTGSGAILLALLSELPNAQGI 149 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185 G DI+ A+ A NA G++ R ++ ++ ++ G FD+IVSNPPYI S +D L + Sbjct: 150 GTDINPDAIHTATRNAAALGLNGRARFIECNYADALRGPFDLIVSNPPYIPSRDIDDLAI 209 Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238 EVR DPR++LDGG DGL YR IA L G+ +EIG Q+ DV R+ Sbjct: 210 EVRAHDPRLALDGGPDGLDAYRVIAPAAFELLVPGGVVILEIGQGQERDVARL 262 >gi|56697311|ref|YP_167677.1| HemK family modification methylase [Ruegeria pomeroyi DSS-3] gi|56679048|gb|AAV95714.1| modification methylase, HemK family [Ruegeria pomeroyi DSS-3] Length = 271 Score = 159 bits (401), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 88/210 (41%), Positives = 119/210 (56%), Gaps = 8/210 (3%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110 + ++G RDFY R +S + +PRPETE L+++AL +LDLG G+GA Sbjct: 64 VSHLVGERDFYGRRFKVSGEVLDPRPETETLIEAAL--------NAPFEHVLDLGVGSGA 115 Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170 + + LL E P G+GVD+S A A +NAV + V R D +SDWF +VEG FD+IVS Sbjct: 116 ILVTLLAERPSATGLGVDLSEAACLQASANAVLHRVEARADIRRSDWFGAVEGRFDLIVS 175 Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230 NPPYI ++ L EVR +P ++L G DGL YR IA G +L G VEIG Sbjct: 176 NPPYIALSEMEALAPEVRRHEPELALTDGGDGLGAYRHIAAGAPDYLLPGGRLLVEIGPT 235 Query: 231 QKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 Q V R+F++ L + D G DRV+ Sbjct: 236 QAQAVSRLFQAAGLSGLRVIPDLDGRDRVV 265 >gi|301170296|emb|CBW29902.1| N5-glutamine methyltransferase, modifies release factors RF-1 and RF-2 [Haemophilus influenzae 10810] Length = 292 Score = 159 bits (401), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 100/265 (37%), Positives = 151/265 (56%), Gaps = 12/265 (4%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L TG Q++ D+ +D++ R LT + R LK E I ILG ++F+++ L Sbjct: 26 DALVLLQHATGKLRTQILAFDDTEIDEKVRLKLTALLDRRLKGEPIAYILGEKEFWSLPL 85 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALLKE-SPFFK 123 +S T PRP+TE+LV+ AL +L ++E+ RILDLGTGTGA+ LAL E +P + Sbjct: 86 NVSKSTLIPRPDTEILVEKALQIALEKLEENPPHFRILDLGTGTGAIALALASELAPICQ 145 Query: 124 G-------VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE 176 +GVD+ + +A+SNA N ++ +F LQS WF ++ G FD+IVSNPPYI Sbjct: 146 KRHIPLEIIGVDLMSDVVALAQSNAERNQLNVQF--LQSCWFDNITGKFDLIVSNPPYIN 203 Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236 + +VR F+P +L +G + R I + S +LN +G+ +E G+ Q V Sbjct: 204 AQDEHLHQGDVR-FEPLSALVANDEGYADLRHIIELASSYLNSNGVLLLEHGWQQGEKVR 262 Query: 237 RIFESRKLFLVNAFKDYGGNDRVLL 261 IF+ +V +DYG N+RV L Sbjct: 263 SIFQENHWEMVETVRDYGDNERVTL 287 >gi|209883258|ref|YP_002287115.1| protein-(glutamine-N5) methyltransferase [Oligotropha carboxidovorans OM5] gi|209871454|gb|ACI91250.1| protein-(glutamine-N5) methyltransferase [Oligotropha carboxidovorans OM5] Length = 290 Score = 158 bits (400), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 95/232 (40%), Positives = 131/232 (56%), Gaps = 1/232 (0%) Query: 30 LDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFS 89 LD + L + I R + E + RILG R+F+ + LS T PRP+TE L+++ L Sbjct: 54 LDTSEAQRLEDVIRRRIAGEPVARILGRREFWGLTFALSPATLVPRPDTETLIEAVLDIL 113 Query: 90 LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 +RILD+GTG+GA+ LALL E P G+G DI+ A+ A NA T G++ R Sbjct: 114 KREGRTAAPLRILDIGTGSGAILLALLSELPNTTGIGTDINPAAIATAADNAATLGLASR 173 Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209 + D+ ++ G FD++VSNPPYI + +D L LEVR DPR++LDGG DGL+ YRTI Sbjct: 174 ATFVACDYAGALRGPFDIVVSNPPYIPTADIDHLDLEVRAHDPRLALDGGADGLTAYRTI 233 Query: 210 ADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK-DYGGNDRVL 260 A L G+ +VEIG Q V + L + K D GG RV+ Sbjct: 234 APLAFALLAPSGIAAVEIGQRQAHGVATLMAEAGLAVPAPAKADLGGVPRVV 285 >gi|118588513|ref|ZP_01545922.1| protoporphyrinogen oxidase [Stappia aggregata IAM 12614] gi|118439219|gb|EAV45851.1| protoporphyrinogen oxidase [Stappia aggregata IAM 12614] Length = 282 Score = 158 bits (400), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 87/219 (39%), Positives = 129/219 (58%), Gaps = 6/219 (2%) Query: 44 RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103 + L+ + RILG R+FY R L+ T EPRP+TE L+D+ L R + + D Sbjct: 63 KRLEGMPVGRILGEREFYGRRFLLNPATLEPRPDTETLIDAVLE----RCTADEAPVMCD 118 Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-- 161 +GTGTGA+ + LL E P + + VD+S +ALE A SNA +GV +R T+++D+ S++ Sbjct: 119 IGTGTGAIAVTLLAELPRSRMIAVDLSEQALECAASNAALHGVGDRLLTVRADYTSALRP 178 Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221 EG FD +VSNPPYI + ++ L EV DP+++LDGG DGL+ Y I + L G Sbjct: 179 EGGFDWVVSNPPYIRTAVLAELSREVIQHDPKLALDGGEDGLTAYVRILTDAEKLLRPGG 238 Query: 222 LCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 ++EIG++Q D+ + + KD GNDRV+ Sbjct: 239 RIALEIGFDQGADLKKQLRHHGFVEIEIIKDLSGNDRVV 277 >gi|148826081|ref|YP_001290834.1| hypothetical protein CGSHiEE_05375 [Haemophilus influenzae PittEE] gi|229847125|ref|ZP_04467230.1| HemK [Haemophilus influenzae 7P49H1] gi|148716241|gb|ABQ98451.1| HemK [Haemophilus influenzae PittEE] gi|229809954|gb|EEP45675.1| HemK [Haemophilus influenzae 7P49H1] gi|309973232|gb|ADO96433.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Haemophilus influenzae R2846] Length = 292 Score = 158 bits (399), Expect = 7e-37, Method: Compositional matrix adjust. Identities = 102/265 (38%), Positives = 151/265 (56%), Gaps = 12/265 (4%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L VTG S Q++ D+ +D++ R LT + R LK E I ILG ++F+++ L Sbjct: 26 DALVLLQHVTGKSRTQILTFDDTEIDEKVRLKLTALLDRRLKGEPIAYILGEKEFWSLPL 85 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALLKE-SPF-- 121 +S T PRP+TE LV+ AL +L ++E+ RILDLGTGTGA+ LAL E +P Sbjct: 86 NVSKGTLIPRPDTESLVEKALQIALEKLEENPPHFRILDLGTGTGAIALALASELAPICQ 145 Query: 122 -----FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE 176 + +GVD+ + +A+SNA N ++ +F LQS WF ++ G FD+IVSNPPYI+ Sbjct: 146 KRHIPLEIIGVDLMPDVVALARSNAERNQLNVQF--LQSSWFDNITGKFDLIVSNPPYID 203 Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236 +VR F+P +L +G + R I + S +LN +G+ +E G+ Q V Sbjct: 204 VQDEHLHQGDVR-FEPLSALVANDEGYADLRHIIELASSYLNSNGVLLLEHGWQQGEKVR 262 Query: 237 RIFESRKLFLVNAFKDYGGNDRVLL 261 IF +V +DYG N+RV L Sbjct: 263 SIFLENYWEMVETVRDYGDNERVTL 287 >gi|84516321|ref|ZP_01003681.1| modification methylase, HemK family [Loktanella vestfoldensis SKA53] gi|84510017|gb|EAQ06474.1| modification methylase, HemK family [Loktanella vestfoldensis SKA53] Length = 277 Score = 157 bits (398), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 85/208 (40%), Positives = 118/208 (56%), Gaps = 8/208 (3%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110 + +LG+RDFY+ R ++ D +PRP+TE +V +ALA +LDLGTG+G Sbjct: 67 LSHLLGYRDFYDHRFIVTPDVLDPRPDTEAIVTAALADPF--------AHVLDLGTGSGC 118 Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170 + L+LL P G+GVD+S AL +A N G+ +R ++SDWF++V G FD+IVS Sbjct: 119 ILLSLLAARPQATGLGVDLSDAALAVAAQNRSALGLDQRATLVRSDWFTAVTGSFDLIVS 178 Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230 NPPYI + + L EVR +P ++L G DGLS+YR IA G HL G VEIG Sbjct: 179 NPPYIAATEMAGLQPEVRLHEPHLALTDGADGLSYYRIIAAGAGAHLAPGGRLIVEIGPT 238 Query: 231 QKVDVVRIFESRKLFLVNAFKDYGGNDR 258 Q DV + + + D G DR Sbjct: 239 QASDVSALLRAAGFTDLRVIPDLDGRDR 266 >gi|145632950|ref|ZP_01788683.1| HemK [Haemophilus influenzae 3655] gi|144986606|gb|EDJ93172.1| HemK [Haemophilus influenzae 3655] Length = 292 Score = 157 bits (398), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 100/265 (37%), Positives = 151/265 (56%), Gaps = 12/265 (4%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L TG Q++ D+ +D++ R LT + R LK E I ILG ++F+++ L Sbjct: 26 DALVLLQHATGKLRTQILAFDDTEIDEKVRLKLTALLDRRLKGEPIAYILGEKEFWSLPL 85 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALLKE-SPF-- 121 +S T PRP+TE LV+ AL +L ++E+ RILDLGTGTGA+ LAL E +P Sbjct: 86 NVSKGTLIPRPDTESLVEKALQIALEKLEENPPHFRILDLGTGTGAIALALASELAPICQ 145 Query: 122 -----FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE 176 + +GVD+ + +A+SNA N ++ +F LQS WF ++ G FD+IVSNPPYI+ Sbjct: 146 KRHIPLEIIGVDLMPDVVALAQSNAERNQLNVQF--LQSRWFDNITGQFDLIVSNPPYID 203 Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236 + +VR F+P +L +G + R I + S +LN +G+ +E G+ Q V Sbjct: 204 AQDEHLHQGDVR-FEPLSALVANDEGYADLRHIIELASSYLNSNGVLLLEHGWQQGEKVR 262 Query: 237 RIFESRKLFLVNAFKDYGGNDRVLL 261 IF+ +V +DYG N+RV L Sbjct: 263 SIFQENHWEMVETVRDYGDNERVTL 287 >gi|296447418|ref|ZP_06889343.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Methylosinus trichosporium OB3b] gi|296255038|gb|EFH02140.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Methylosinus trichosporium OB3b] Length = 304 Score = 157 bits (397), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 89/251 (35%), Positives = 134/251 (53%), Gaps = 2/251 (0%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 RD+ + L +++ ++++P + L + L + R E + RILG R F+ Sbjct: 33 RDARALLLAAGEMTAADLLLEPHARLSPCVQRRLDDFARRRAAREPVTRILGARGFWTQD 92 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L ++ D +PR +TE LV ALA L R + D + ILDLG G+GA+ ALL E P + Sbjct: 93 LVVAPDVLDPRADTETLV--ALALDLLRERRNDALTILDLGVGSGAITCALLSELPQARA 150 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184 VGVD+S +A A N G++ R L+ W ++E FD++VSNPPY+ S + L Sbjct: 151 VGVDLSGEACAAASVNIARCGIAARATILRGRWAQALETRFDLVVSNPPYVASGEIATLA 210 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 EVR DP ++LDGG DGL+ YR I + R L L +E G Q + + E+ L Sbjct: 211 PEVRLHDPSLALDGGADGLACYREIIADLPRILAPHALAVLEAGAGQAASIAALLEAAGL 270 Query: 245 FLVNAFKDYGG 255 + +D+ G Sbjct: 271 EIAEIREDFAG 281 >gi|257464823|ref|ZP_05629194.1| HemK-like protein/protein-glutamine N-methyl transferase [Actinobacillus minor 202] gi|257450483|gb|EEV24526.1| HemK-like protein/protein-glutamine N-methyl transferase [Actinobacillus minor 202] Length = 289 Score = 157 bits (397), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 96/257 (37%), Positives = 146/257 (56%), Gaps = 6/257 (2%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D++ L VT S + ++VL + + L + R K E I ILG ++F+++ L Sbjct: 29 DANVLLQAVTKRSKSAIFAFSETVLSEAELTELNALLARRAKGEPIAYILGEKEFWSLPL 88 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE-SPFFKG 124 +S+ T PRP+TE LV+ AL ++ R+ ++ ++ILDLGTGTGA+ LAL E + Sbjct: 89 AVSTATLIPRPDTECLVEVALEWAYKRLNSQETLQILDLGTGTGAIALALASELGEKAQI 148 Query: 125 VGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDC 182 +GVD +A+++A+ N G + RF LQSDWFS +E FD+IVSNPPYI+ + Sbjct: 149 IGVDKQAEAVQLAEQNRQNLGFEQVRF--LQSDWFSVLENHCFDLIVSNPPYIDKDDENL 206 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 +VR F+P +L GLS + I + +L K G +E G+ Q DV +IF+ Sbjct: 207 TKGDVR-FEPLTALVAEQHGLSDLQKIIENAPLYLAKQGALMLEHGWQQAADVQQIFKQN 265 Query: 243 KLFLVNAFKDYGGNDRV 259 + + FKDYG DR+ Sbjct: 266 QWDKIETFKDYGNQDRI 282 >gi|148826785|ref|YP_001291538.1| hypothetical protein CGSHiGG_00160 [Haemophilus influenzae PittGG] gi|148718027|gb|ABQ99154.1| HemK [Haemophilus influenzae PittGG] Length = 292 Score = 157 bits (396), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 101/265 (38%), Positives = 150/265 (56%), Gaps = 12/265 (4%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L TG S Q++ D+ +D++ R LT + R LK E I ILG ++F+++ L Sbjct: 26 DALVLLQHATGKSRTQILAFDDTEIDEKVRLKLTALLDRRLKGEPIAYILGEKEFWSLPL 85 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALLKE-SPF-- 121 +S T PRP+TE LV+ AL +L ++E+ RILDLGTGTGA+ LAL E +P Sbjct: 86 NVSKGTLIPRPDTESLVEKALQIALEKLEENPPHFRILDLGTGTGAIALALASELAPICQ 145 Query: 122 -----FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE 176 + +GVD+ + +A+SNA N ++ F LQS WF ++ G FD+IVSNPPYI+ Sbjct: 146 KRHIPLEIIGVDLMPDVVALAQSNAERNQLNVEF--LQSRWFDNITGKFDLIVSNPPYID 203 Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236 + +VR F+P +L +G + R I + S +LN +G+ +E G+ Q V Sbjct: 204 AQDEHLHQGDVR-FEPLSALVANDEGYADLRHIIELASSYLNSNGVLLLEHGWQQGEKVR 262 Query: 237 RIFESRKLFLVNAFKDYGGNDRVLL 261 IF +V +DYG N+RV L Sbjct: 263 SIFLENYWEMVETVRDYGDNERVTL 287 >gi|84503528|ref|ZP_01001579.1| modification methylase, HemK family protein [Oceanicola batsensis HTCC2597] gi|84388018|gb|EAQ01066.1| modification methylase, HemK family protein [Oceanicola batsensis HTCC2597] Length = 279 Score = 157 bits (396), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 97/223 (43%), Positives = 122/223 (54%), Gaps = 8/223 (3%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101 I R L HE + RI+G R FY +S T +PRPETE LV AL +R R+ Sbjct: 63 IARRLLHEPVSRIVGGRWFYGRWFDVSPATLDPRPETETLVQIAL--------ERRFDRV 114 Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 LDLGTGTG + ++LL E +GVG D+S AL A NA T GV++R ++SDW + V Sbjct: 115 LDLGTGTGCIVISLLAERADARGVGSDLSEGALATAAENAATCGVADRLSLVRSDWMAGV 174 Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221 +G FD+IVSNPPYI + L +V FDPR +L G+DGL YR IA L G Sbjct: 175 DGTFDLIVSNPPYIAPEEMSGLAPDVTKFDPRQALTDGVDGLGAYRAIAAQAPARLVPGG 234 Query: 222 LCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 VEIG Q V +F L + F D G DRV+ R Sbjct: 235 RLLVEIGPTQAGAVAGLFRDAGLTEIRTFPDLDGRDRVVAALR 277 >gi|110680313|ref|YP_683320.1| HemK family modification methylase [Roseobacter denitrificans OCh 114] gi|109456429|gb|ABG32634.1| modification methylase, HemK family, putative [Roseobacter denitrificans OCh 114] Length = 271 Score = 157 bits (396), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 83/210 (39%), Positives = 125/210 (59%), Gaps = 8/210 (3%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110 + +++G R+FY R ++ + +PRPETE L++ AL+ + LDLG G+G Sbjct: 64 VSQLIGGREFYGRRFEITREVLDPRPETESLIEVALSAPFNTV--------LDLGVGSGC 115 Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170 + + LL E P GV VD+S A A +NAV + V++R L+SDWF +VEG FD+IVS Sbjct: 116 LIVTLLAERPDATGVAVDLSEAACLQASANAVLHEVADRVQVLKSDWFDAVEGRFDLIVS 175 Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230 NPPY+ + + + E+RD +PR++L DGL+ YR IA +L+ DG VE G+ Sbjct: 176 NPPYLAASEMAQVQPELRDHEPRLALTDEADGLTAYRVIAAEAQGYLSADGRVLVETGWR 235 Query: 231 QKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 Q DV IFE++ ++ D GG DR++ Sbjct: 236 QASDVRDIFEAQGWGELSILPDLGGRDRIV 265 >gi|163735802|ref|ZP_02143231.1| modification methylase, HemK family, putative [Roseobacter litoralis Och 149] gi|161390888|gb|EDQ15228.1| modification methylase, HemK family, putative [Roseobacter litoralis Och 149] Length = 277 Score = 157 bits (396), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 84/210 (40%), Positives = 127/210 (60%), Gaps = 8/210 (3%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110 + +++G R+FY R ++ + +PRPETE L+++AL S P + LDLG G+G Sbjct: 70 VSQLIGSREFYGRRFNITREVLDPRPETESLIEAAL--SAPFSDA------LDLGVGSGC 121 Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170 + + LL E P KGV +DIS A A +NAV + V++R L+SDWF +VEG FD+IVS Sbjct: 122 LIVTLLAERPDAKGVAIDISEAACLQASANAVLHEVADRVQVLKSDWFDAVEGRFDLIVS 181 Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230 NPPY+ + + + E+RD +PR++L DGL+ YR IA +L+ +G VE G+ Sbjct: 182 NPPYLAASEMSQVQPELRDHEPRLALTDEADGLTAYRVIAAEAQGYLSAEGRVLVETGWQ 241 Query: 231 QKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 Q V IFE++ ++ D GG DR++ Sbjct: 242 QASSVRDIFEAQGWGELSILPDLGGRDRIV 271 >gi|126725347|ref|ZP_01741189.1| Putative methylase [Rhodobacterales bacterium HTCC2150] gi|126704551|gb|EBA03642.1| Putative methylase [Rhodobacterales bacterium HTCC2150] Length = 277 Score = 157 bits (396), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 86/211 (40%), Positives = 122/211 (57%), Gaps = 8/211 (3%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110 + +I+G R FY ++ D +PRPETE+L+ +AL ++ ++LDLGTG+GA Sbjct: 70 VSQIIGRRHFYGRDFIVTPDVLDPRPETEILISAAL--------EQPFQKVLDLGTGSGA 121 Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170 + + LL E G G DIS AL +A NAV VSER D ++SDWF +V+G FD+IVS Sbjct: 122 ILVTLLAEQMGANGQGADISDAALNVASRNAVALNVSERADFVKSDWFENVDGDFDLIVS 181 Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230 NPPY+ + L VR+F+P+++L G DGL YR I + + L G VEIG Sbjct: 182 NPPYVTADEYSALDKGVREFEPKLALTPGGDGLMPYRLITERIQSFLRPFGRLLVEIGPT 241 Query: 231 QKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 Q V +F+ L V KD+ DRV++ Sbjct: 242 QGAAVKAMFKESGLSEVQVLKDFDARDRVVI 272 >gi|284047801|ref|YP_003398140.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Acidaminococcus fermentans DSM 20731] gi|283952022|gb|ADB46825.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Acidaminococcus fermentans DSM 20731] Length = 302 Score = 157 bits (396), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 98/261 (37%), Positives = 140/261 (53%), Gaps = 7/261 (2%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ LC V S Q+ + D L++++ + R E + ILG + F Sbjct: 32 DAEVLLCAVLDKSRIQLYTNFDEPLEEQELKQYRGYVARRAAREPVAYILGHKGFLQYDF 91 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 ++ DT PRPETELLV+ ++ + R VRILDLG G+GA+ +LL E P +G+ Sbjct: 92 KVTKDTLIPRPETELLVEQLVSLN----RDRGPVRILDLGCGSGAIIDSLLAELPEARGM 147 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVDCL 183 GVDIS A + + NA + GV +R +T+ SD + V E F V+VSNPPYI + L Sbjct: 148 GVDISPGAAAVTRENAQSLGVGDRLETVVSDLYEKVPREEKFQVLVSNPPYIPEGDLAGL 207 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 EV +PR +LDGG DGL YR I + +L+ +G+ + EIG Q DV R+ Sbjct: 208 QAEVHR-EPRRALDGGRDGLDFYRRILRDLWSYLDPEGMAAFEIGQGQGEDVARLCREAG 266 Query: 244 LFLVNAFKDYGGNDRVLLFCR 264 L V KDYG DR++ + Sbjct: 267 LDCVKVRKDYGDMDRMVFAAK 287 >gi|307256017|ref|ZP_07537805.1| Protein hemK [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306865439|gb|EFM97334.1| Protein hemK [Actinobacillus pleuropneumoniae serovar 10 str. D13039] Length = 296 Score = 156 bits (395), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 95/256 (37%), Positives = 147/256 (57%), Gaps = 4/256 (1%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D++ L VT + + ++ L + L + R L+ E + ILG ++F+++ L Sbjct: 29 DTNLLLQAVTKRTKSAIFAFGETALHQTELAELAQLLARRLQGEPMAYILGEKEFWSLPL 88 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE-SPFFKG 124 +S T PRP+TE LV+ AL ++ R++ + +RILDLGTGTGA+ LAL E + Sbjct: 89 KVSPHTLIPRPDTECLVEVALDWAYKRLKIQQTLRILDLGTGTGAIALALASELGNNVQI 148 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183 +GVD +A+++A++N G S LQSDWFS++E FD+IVSNPPYI+ + Sbjct: 149 LGVDFKAEAVQLAETNRQNLGFS-NVSFLQSDWFSALENQQFDLIVSNPPYIDQQDENLQ 207 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 +VR F+P +L DGLS + I HLN +G +E G+ Q V +IF+ + Sbjct: 208 YGDVR-FEPLSALVAEQDGLSDLQKIIQNAPLHLNDNGALILEHGWQQAQAVQQIFQQYQ 266 Query: 244 LFLVNAFKDYGGNDRV 259 + +F+DYGGNDR+ Sbjct: 267 WDEIASFQDYGGNDRL 282 >gi|312115444|ref|YP_004013040.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Rhodomicrobium vannielii ATCC 17100] gi|311220573|gb|ADP71941.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Rhodomicrobium vannielii ATCC 17100] Length = 306 Score = 156 bits (395), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 102/264 (38%), Positives = 133/264 (50%), Gaps = 8/264 (3%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIV---RSLKHESIHRILGWRDFYN 62 D+ G SS +++ D+ L L AI R E + RI+G R+F+ Sbjct: 26 DARLLSAYAAGFSSEEIVTKRDTALPPE---ILDRAIAVAQRRFAGEPVSRIVGTREFWG 82 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + LS T +PRP+TE+LVD+ LA+ +RILDLGTGTG + ALL E P Sbjct: 83 MPFGLSPHTLDPRPDTEVLVDAGLAWCRKHDLANAPLRILDLGTGTGCILAALLSELPKA 142 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW-FSSVEGLFDVIVSNPPYIESVIVD 181 GVGVD S AL A++N G+S R DW + + FD+I NPPYIE+ + Sbjct: 143 TGVGVDRSEGALRTARANFARLGLSSRAFFFCGDWGVALADATFDIIACNPPYIETADIA 202 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV-RIFE 240 L EVRDFDP ++LDGG DGL YR I SR L GL E G+ Q V + E Sbjct: 203 GLCAEVRDFDPALALDGGKDGLKAYRDIVPQASRLLRVPGLLIFETGHRQARSVRDMVTE 262 Query: 241 SRKLFLVNAFKDYGGNDRVLLFCR 264 F F D G +R + R Sbjct: 263 LDAGFQTEIFLDLAGIERAVAGVR 286 >gi|319897177|ref|YP_004135372.1| n5-glutamine methyltransferase, modifies release factors rf-1 and rf-2 [Haemophilus influenzae F3031] gi|317432681|emb|CBY81044.1| N5-glutamine methyltransferase, modifies release factors RF-1 and RF-2 [Haemophilus influenzae F3031] Length = 292 Score = 156 bits (395), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 99/265 (37%), Positives = 149/265 (56%), Gaps = 12/265 (4%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L TG S Q++ D+ +D++ R L + R LK E I ILG ++F+++ L Sbjct: 26 DALVLLQHATGKSRTQILAFDDTEIDEKVRLKLIALLDRRLKGEPIAYILGEKEFWSLPL 85 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALLKESP---- 120 +S T PRP+TE+LV+ AL +L ++E+ RILDLGTGTGA+ LAL E Sbjct: 86 NVSKSTLIPRPDTEILVEKALQIALEKLEENPPHFRILDLGTGTGAIALALASELSSICQ 145 Query: 121 ----FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE 176 + +GVD+ + +A+SNA N ++ F LQS WF ++ G FD+IVSNPPYI+ Sbjct: 146 KRLISLEIIGVDLMPDVVALAQSNAERNQLNVEF--LQSCWFDNITGKFDLIVSNPPYID 203 Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236 + +VR F+P +L +G + R I + S +LN +G+ +E G+ Q V Sbjct: 204 AQDEHLHQGDVR-FEPLSALVANDEGYADLRHIIELASSYLNSNGVLLLEHGWQQGEKVR 262 Query: 237 RIFESRKLFLVNAFKDYGGNDRVLL 261 IF+ +V +DYG N+RV L Sbjct: 263 SIFQENHWEMVETVRDYGDNERVTL 287 >gi|260583302|ref|ZP_05851077.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Haemophilus influenzae NT127] gi|260093662|gb|EEW77575.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Haemophilus influenzae NT127] Length = 292 Score = 156 bits (394), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 100/265 (37%), Positives = 151/265 (56%), Gaps = 12/265 (4%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L TG Q++ D+ +D++ R LT + R LK E I ILG ++F+++ L Sbjct: 26 DALVLLQHATGKLRTQILAFDDTEIDEKVRLKLTALLDRRLKGEPIAYILGEKEFWSLPL 85 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALLKE-SPF-- 121 +S T PRP+TE+LV+ AL +L ++E+ RILDLGTGTGA+ LAL E +P Sbjct: 86 NVSKSTLIPRPDTEILVEKALQIALEKLEENPPHFRILDLGTGTGAIALALASELAPICQ 145 Query: 122 -----FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE 176 + +GVD+ + +A+SNA N ++ +F LQS WF ++ G FD+IVSNPPYI+ Sbjct: 146 KRHIPLEIIGVDLMSDVVALAQSNAERNQLNVQF--LQSCWFDNITGKFDLIVSNPPYID 203 Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236 + +VR F+P +L +G + R I + S +LN +G+ +E G+ Q V Sbjct: 204 AQDEHLHQGDVR-FEPLSALVANGEGYADLRHIIELASSYLNSNGVLLLEHGWQQGEKVR 262 Query: 237 RIFESRKLFLVNAFKDYGGNDRVLL 261 IF +V +DYG N+RV L Sbjct: 263 SIFLENYWEMVETVRDYGDNERVTL 287 >gi|332140930|ref|YP_004426668.1| peptide release factor-glutamine N5-methyltransferase(HemK) [Alteromonas macleodii str. 'Deep ecotype'] gi|327550952|gb|AEA97670.1| peptide release factor-glutamine N5-methyltransferase(HemK) [Alteromonas macleodii str. 'Deep ecotype'] Length = 285 Score = 156 bits (394), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 99/262 (37%), Positives = 141/262 (53%), Gaps = 9/262 (3%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L + G S + PD L Q +AI R E + I+G RDF+ + L Sbjct: 23 DAKVMLADILGKSQTYLFTWPDKTLTPSQIAEFEDAIERRKAGEPVAYIIGKRDFWTLSL 82 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIE----KRDVVRILDLGTGTGAVCLALLKESPF 121 SS T PRP+TE+LV+ + ++ + + + I DLGTGTGA+ LAL E P Sbjct: 83 FTSSHTLIPRPDTEVLVEHVINWATGNVSANTPNKPPLSICDLGTGTGAIALALASELPQ 142 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEG-LFDVIVSNPPYIESVI 179 +GVD A+ +AK NA +N ++ RF +QSDWFS++ G FD+IVSNPPYI+ Sbjct: 143 ASVIGVDFLSDAVALAKRNANSNKINNARF--MQSDWFSALRGHTFDIIVSNPPYIDETS 200 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 +VR F+P+ +L G GLS + I S +LN +GL + E G++Q V + Sbjct: 201 PYLNEGDVR-FEPKSALTSGDSGLSDIKHIISHASTYLNSNGLLAFEHGFDQGDAVKALL 259 Query: 240 ESRKLFLVNAFKDYGGNDRVLL 261 ++ V KDYG NDRV L Sbjct: 260 QTSGFVNVKTIKDYGNNDRVTL 281 >gi|315500227|ref|YP_004089030.1| protein-(glutamine-n5) methyltransferase, release factor-specific [Asticcacaulis excentricus CB 48] gi|315418239|gb|ADU14879.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Asticcacaulis excentricus CB 48] Length = 289 Score = 155 bits (392), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 90/257 (35%), Positives = 135/257 (52%), Gaps = 5/257 (1%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L TG + ++ DP +L Q+ L + + R K + RILG + F+ + L Sbjct: 30 DARLLLEAATGYTRTDILTDPYKLLTAEQKATLDDYLTRREKRVPVARILGRKGFWKLLL 89 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 L+ PRPETE +VD L + E+ + DLG G+GA+ L++L E P KG+ Sbjct: 90 DLTPAVLVPRPETECIVDMILKTT----EEGQAFTLADLGVGSGAILLSVLSERPAAKGL 145 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLG 184 G D+S +AL +A+ NA G+ R L++ W + + + FD + SNPPYI S ++ L Sbjct: 146 GTDVSEEALAVARDNAANLGLDGRAAFLRTSWGAGLADASFDFVASNPPYIRSEVIPTLD 205 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 EVRD DP ++LDGG GL Y + R L G +EIGY+Q V + + Sbjct: 206 PEVRDHDPHLALDGGESGLDAYIEMIPEAFRILKAGGTAWMEIGYDQSAAVEDLMKKAGF 265 Query: 245 FLVNAFKDYGGNDRVLL 261 F V FKD R+++ Sbjct: 266 FNVVTFKDLSDLPRIVI 282 >gi|68249926|ref|YP_249038.1| hypothetical protein NTHI1574 [Haemophilus influenzae 86-028NP] gi|145631801|ref|ZP_01787561.1| HemK [Haemophilus influenzae R3021] gi|68058125|gb|AAX88378.1| HemK [Haemophilus influenzae 86-028NP] gi|144982591|gb|EDJ90141.1| HemK [Haemophilus influenzae R3021] Length = 292 Score = 155 bits (392), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 100/265 (37%), Positives = 148/265 (55%), Gaps = 12/265 (4%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L TG S Q++ D+ +D++ R LT + R LK E I ILG ++F+++ L Sbjct: 26 DALVLLQHATGKSRTQILAFDDTEIDEKVRLKLTALLDRRLKGEPIAYILGEKEFWSLPL 85 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALLKE-SPF-- 121 +S T PRP+TE LV+ AL +L ++E+ RILDLGTGTGA+ LAL E P Sbjct: 86 NVSKSTLIPRPDTESLVEKALQIALEKLEENPPHFRILDLGTGTGAIALALASELEPICQ 145 Query: 122 -----FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE 176 + +GVD+ + +A+SNA N ++ F LQS WF ++ G FD+IVSNPPYI+ Sbjct: 146 KRHIPLEIIGVDLMPDVVALAQSNAERNQLNVEF--LQSRWFDNITGKFDLIVSNPPYID 203 Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236 + +VR F+P +L G + R I + S +LN +G+ +E G+ Q V Sbjct: 204 AQDEHLHQGDVR-FEPLSALVANDAGYADLRHIIELASSYLNSNGVLLLEHGWQQGEKVR 262 Query: 237 RIFESRKLFLVNAFKDYGGNDRVLL 261 IF+ +V +DY N+RV L Sbjct: 263 SIFQENHWEMVETVRDYSDNERVTL 287 >gi|86747199|ref|YP_483695.1| HemK family modification methylase [Rhodopseudomonas palustris HaA2] gi|86570227|gb|ABD04784.1| modification methylase, HemK family [Rhodopseudomonas palustris HaA2] Length = 289 Score = 155 bits (392), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 105/251 (41%), Positives = 142/251 (56%), Gaps = 3/251 (1%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ + TGL +IV + VL + L VR L E + RILG R+F+ + L Sbjct: 29 DARLLIGEATGLDLTGLIVQAERVLTLDEAERLDAFAVRRLAGEPVARILGVREFWGLAL 88 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 LS DT PRP+TE +V++AL R E R ILDLGTG+GA+ LALL E P GV Sbjct: 89 RLSDDTLVPRPDTETVVEAALDHL--RAEARARPLILDLGTGSGAILLALLSECPDAFGV 146 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185 DIS AL A++NA G+++R + D+ +++ G FD+IVSNPPYI + + L + Sbjct: 147 ATDISLGALRAARANAAALGLADRAGFVACDYAAALGGSFDLIVSNPPYIPASAIAALDV 206 Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245 EVR+ DPR +LDGG DGL YR I +R L + G VEIG Q DV + + L Sbjct: 207 EVREHDPRRALDGGEDGLDAYRRIIPEAARLLGRGGALVVEIGQGQGDDVAALMRASGLA 266 Query: 246 LVN-AFKDYGG 255 + +D GG Sbjct: 267 VPEPPRRDLGG 277 >gi|83859677|ref|ZP_00953197.1| hemK family protein [Oceanicaulis alexandrii HTCC2633] gi|83852036|gb|EAP89890.1| hemK family protein [Oceanicaulis alexandrii HTCC2633] Length = 285 Score = 155 bits (391), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 91/259 (35%), Positives = 137/259 (52%), Gaps = 3/259 (1%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 +A D+ L S +++ + S + D + I R + E + ILG + F+ Sbjct: 24 EAADDARRLLLAAFEGSPARLLTEMASEMPDAELERFDALIGRREQREPLSHILGTQPFW 83 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 + L ++ D PR +TE L+++ALA + P ++R +RILD+ TG+GA+ LALL E P Sbjct: 84 TLELKVTRDVLTPRADTETLIEAALA-AYP--DRRAPLRILDIATGSGAIILALLSEFPN 140 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181 G DIS AL +A+ NA G+++R W +EG FD++VSNPPYI + ++D Sbjct: 141 ATGAATDISEAALAVAQENADLTGLADRVSFQHQSWADGLEGPFDLLVSNPPYIATAVID 200 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 L EVR ++PR++L+GG G Y + SR L GL EIGY+Q V Sbjct: 201 ELEPEVRAYEPRMALEGGRTGFEPYPHLFAEASRLLVPGGLALFEIGYDQGVRAREAASE 260 Query: 242 RKLFLVNAFKDYGGNDRVL 260 KD G+DRV+ Sbjct: 261 AGAKETRILKDLAGHDRVV 279 >gi|254559641|ref|YP_003066736.1| protein-( glutamine-N5) methyltransferase [Methylobacterium extorquens DM4] gi|254266919|emb|CAX22718.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Methylobacterium extorquens DM4] Length = 302 Score = 155 bits (391), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 95/226 (42%), Positives = 135/226 (59%), Gaps = 6/226 (2%) Query: 38 LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97 L A R L E + RILG +F+ + L +T PRP+TE +V++AL LP E+ Sbjct: 71 LRQAAERRLAGEPVARILGAWEFWGLSFALGPETLVPRPDTESVVETALRL-LP--ERER 127 Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 +R++DLGTG+G + +ALL E P G+G+D S AL IA+ NA NGV++R L W Sbjct: 128 PLRLIDLGTGSGCILVALLHERPGALGIGLDRSAAALAIARRNAAANGVADRAAFLCGSW 187 Query: 158 FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH- 216 +++EG FD+IVSNPPYI + ++ L EVR DP+ +LDGG DGL YR I V+R Sbjct: 188 LNALEGPFDLIVSNPPYIAAPVIATLEPEVRLHDPQAALDGGADGLDAYRAILADVARRP 247 Query: 217 --LNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 L+ G +EIGY+Q + R+ + + +D GNDRV+ Sbjct: 248 GLLSAQGALVLEIGYDQANALTRLAQEAGFEDIGVGQDLAGNDRVV 293 >gi|240137463|ref|YP_002961934.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Methylobacterium extorquens AM1] gi|240007431|gb|ACS38657.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Methylobacterium extorquens AM1] Length = 302 Score = 154 bits (390), Expect = 8e-36, Method: Compositional matrix adjust. Identities = 96/226 (42%), Positives = 134/226 (59%), Gaps = 6/226 (2%) Query: 38 LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97 L A R L E + RILG +F+ + L +T PRP+TE +V++AL LP E+ Sbjct: 71 LRQAAERRLAGEPVARILGAWEFWGLPFALGPETLVPRPDTESVVETALRL-LP--ERER 127 Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 +R++DLGTGTG + +ALL E P G+G+D S AL IA+ NA NGV++R L W Sbjct: 128 PLRLIDLGTGTGCILVALLHERPGAVGIGLDRSAAALAIARRNAAANGVADRAAFLCGSW 187 Query: 158 FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH- 216 ++EG FD+IVSNPPYI + ++ L EVR DP+ +LDGG DGL YR I V+R Sbjct: 188 LDALEGPFDLIVSNPPYIAAPVIATLEPEVRLHDPQAALDGGADGLDAYRAILADVARRP 247 Query: 217 --LNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 L+ G +EIGY+Q + R+ + + +D GNDRV+ Sbjct: 248 GLLSAQGALVLEIGYDQANALTRLAQEAGFEDIGFGRDLAGNDRVV 293 >gi|54288339|gb|AAV31627.1| putative protoporphyrinogen oxidase [uncultured alpha proteobacterium EBAC2C11] Length = 294 Score = 154 bits (390), Expect = 9e-36, Method: Compositional matrix adjust. Identities = 86/237 (36%), Positives = 143/237 (60%), Gaps = 2/237 (0%) Query: 28 SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALA 87 S LD + L+ + R L E I RI GWR+F+++R +S T +PRP++E ++ +A+ Sbjct: 54 SPLDAGCQRHLSAMLERRLAGEPISRIRGWREFWSLRFAISQSTLDPRPDSETMIQAAVT 113 Query: 88 FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147 +++ + D +R LDLGTG+G + L+LL E P G+G+D+S A+ +A +NA + G+ Sbjct: 114 WAIANSAQMDPLRCLDLGTGSGCLLLSLLSELPQAIGIGIDVSLDAIGVAVANANSLGLG 173 Query: 148 ERFDTLQSDWFSSVE--GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSH 205 +R Q + + G FD+I+SNPPYI ++ + L ++VR+FDP ++LDGG DG+S Sbjct: 174 DRVHFHQHSFCDDLSNFGSFDIILSNPPYIPTLDIAGLAVDVREFDPALALDGGFDGMSC 233 Query: 206 YRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262 +R + + L+ +G VEIG Q+ +V++ + L LV + +D R L F Sbjct: 234 WRGLLPRLGELLSDEGAAFVEIGKGQEAAIVQLASNANLELVKSHRDLSDVIRCLQF 290 >gi|163746456|ref|ZP_02153814.1| modification methylase, HemK family, putative [Oceanibulbus indolifex HEL-45] gi|161380341|gb|EDQ04752.1| modification methylase, HemK family, putative [Oceanibulbus indolifex HEL-45] Length = 280 Score = 154 bits (389), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 92/239 (38%), Positives = 131/239 (54%), Gaps = 9/239 (3%) Query: 22 VIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELL 81 ++ P+ + D F +R+++ + +++G R FY ++S D +PRPETE L Sbjct: 45 TLIAPEEIAPDVAERFEQLIALRAVRV-PVSQLIGRRAFYGRDFSISRDVLDPRPETETL 103 Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 VD AL RI LDLGTG+G + + LL E G+GVD+S A A +NA Sbjct: 104 VDLALGSHFDRI--------LDLGTGSGCILVTLLAERAQATGLGVDLSEAACLQASANA 155 Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201 V +GV+ER + QSDWFS+VEG FD+I+SNPPY+ + + + E+R +P ++L G D Sbjct: 156 VQHGVAERAEIRQSDWFSAVEGRFDLILSNPPYLAAEEMADVSPELRQHEPEMALTDGQD 215 Query: 202 GLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 GLS YR IA +L +G VEIG+ Q V IF V D G RV+ Sbjct: 216 GLSIYRIIATEAQGYLTPEGRVMVEIGWQQGEAVQDIFTKAGWGRVTLAHDLDGRPRVV 274 >gi|239996063|ref|ZP_04716587.1| peptide release factor-glutamine N5-methyltransferase(HemK) [Alteromonas macleodii ATCC 27126] Length = 279 Score = 154 bits (389), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 94/257 (36%), Positives = 133/257 (51%), Gaps = 5/257 (1%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L + G S + P+ LD Q+ + + + E + I+G RDF+ + L Sbjct: 23 DAKVMLANILGKSQTYLFTWPNKTLDAAQKAQFEADVAKRKRGEPVAYIIGKRDFWTLSL 82 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 S DT PRP+TE+LV+ L ++ + I DLGTGTGA+ LAL E P Sbjct: 83 FTSPDTLIPRPDTEVLVEHVLNWA--NQHSSASLSICDLGTGTGAIALALASELPEASVT 140 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLG 184 GVD A+ +A NA N ++ +QSDWFS++ G FD+IVSNPPYIE Sbjct: 141 GVDFQAGAVNLATRNAQANSIANAH-FVQSDWFSALAGQTFDIIVSNPPYIEESSPYLNE 199 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 +VR F+P+ +L G DGL + I + ++LNK L + E G++Q V + Sbjct: 200 GDVR-FEPKTALTSGSDGLDDIKQIINNAPQYLNKGALLAFEHGFDQGAAVNALLVDAGF 258 Query: 245 FLVNAFKDYGGNDRVLL 261 V KDYG NDRV L Sbjct: 259 VEVKTVKDYGDNDRVTL 275 >gi|165977489|ref|YP_001653082.1| protein-glutamine N-methyl transferase [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|165877590|gb|ABY70638.1| protein-glutamine N-methyl transferase [Actinobacillus pleuropneumoniae serovar 3 str. JL03] Length = 320 Score = 154 bits (389), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 95/256 (37%), Positives = 145/256 (56%), Gaps = 4/256 (1%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D++ L VT + + ++ L + L + R L+ E + ILG ++F+++ L Sbjct: 53 DANLLLQAVTKRTKSAIFAFGETALHQTELAELAQLLARRLQGEPMAYILGEKEFWSLPL 112 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE-SPFFKG 124 +S T PRP+TE LV+ AL + R+E + ++ILDLGTGTGA+ LAL E + Sbjct: 113 KVSPHTLIPRPDTERLVEVALDWVYKRLESQQTLQILDLGTGTGAIALALASELGDKAQI 172 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183 +GVD +A+ +A++N G E LQSDWFS++E FD+IVSNPPYI+ + Sbjct: 173 IGVDFKLEAVTLAETNRQNLGF-ENVRFLQSDWFSALENRQFDLIVSNPPYIDQQDENLQ 231 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 +VR F+P +L DGLS + I HLN +G +E G+ Q V +IF+ + Sbjct: 232 YGDVR-FEPLSALVAEQDGLSDLQKIIQNAPLHLNDNGALILEHGWQQAQAVQQIFQQYQ 290 Query: 244 LFLVNAFKDYGGNDRV 259 + +F+DYGGNDR+ Sbjct: 291 WDEIASFQDYGGNDRL 306 >gi|254472106|ref|ZP_05085506.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Pseudovibrio sp. JE062] gi|211958389|gb|EEA93589.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Pseudovibrio sp. JE062] Length = 294 Score = 154 bits (388), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 86/256 (33%), Positives = 133/256 (51%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ G+ ++++ D + +T L + + RILG R+F+ + Sbjct: 35 DARVLTAEALGIEPRNLVLEYDREISPEVIAVMTRYAEERLAGKPVGRILGKREFWGLEF 94 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 +LS T EPRP+TE LV++ LAF D+GTGTGA+ +ALL E P V Sbjct: 95 SLSQATLEPRPDTETLVEATLAFCQANGGFDKPWVFADIGTGTGAIAIALLSELPNAICV 154 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185 VDIS +ALE A+ NA NG RF ++ + ++ G FD +VSNPPYI S +++ L Sbjct: 155 AVDISEEALETARQNAANNGFESRFIPVRGSYLDALNGAFDFVVSNPPYIRSAVIEGLSH 214 Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245 EV+ DP ++LDGG DGL+ Y+ + L ++ +EIG++Q ++ + Sbjct: 215 EVKQHDPMLALDGGDDGLTAYKELIGNAKLVLKRNSGLLMEIGFDQAEELSTLARELVGL 274 Query: 246 LVNAFKDYGGNDRVLL 261 V D G RV++ Sbjct: 275 EVRCEHDLAGQPRVIV 290 >gi|145639101|ref|ZP_01794709.1| HemK [Haemophilus influenzae PittII] gi|145272073|gb|EDK11982.1| HemK [Haemophilus influenzae PittII] gi|309751052|gb|ADO81036.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Haemophilus influenzae R2866] Length = 292 Score = 154 bits (388), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 99/265 (37%), Positives = 146/265 (55%), Gaps = 12/265 (4%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L TG Q++ D+ +D++ R LT + R LK E I ILG ++F+++ L Sbjct: 26 DALVLLQYATGKPRTQILAFDDTEIDEKVRLKLTALLDRRLKGEPIAYILGEKEFWSLPL 85 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALLKE------ 118 +S T PRP+TE+LV+ AL SL ++E+ RILDLGTGTGA+ LAL E Sbjct: 86 NVSKGTLIPRPDTEVLVEKALQISLEKLEQNPPHFRILDLGTGTGAIALALASELFSICQ 145 Query: 119 --SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE 176 + +GVD+ + +A+SNA N ++ +F LQS WF ++ G FD+IVSNPPYI+ Sbjct: 146 KRQISLEIIGVDLMPDVVALAQSNAERNQLNVQF--LQSRWFDNITGKFDLIVSNPPYID 203 Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236 +VR F+P +L G + R I + +LN +G +E G+ Q V Sbjct: 204 VQDEHLHQGDVR-FEPLSALVANDAGYADLRYIIESAPNYLNFNGTLLLEHGWQQGEKVR 262 Query: 237 RIFESRKLFLVNAFKDYGGNDRVLL 261 IF+ +V +DYG N+RV L Sbjct: 263 SIFQENHWEMVETVRDYGDNERVTL 287 >gi|323138797|ref|ZP_08073861.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Methylocystis sp. ATCC 49242] gi|322395945|gb|EFX98482.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Methylocystis sp. ATCC 49242] Length = 298 Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 88/244 (36%), Positives = 139/244 (56%), Gaps = 2/244 (0%) Query: 21 QVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETEL 80 ++ + P + L + L++ R E + RILG R F+ + L ++ D +PRP+TE Sbjct: 52 ELAMRPQAPLAEEHADALSHYAARRAAREPVSRILGERGFWTLDLLVAPDVLDPRPDTET 111 Query: 81 LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140 L+++ L L ++ + + ILDLGTG+GA+ ALL E P + V VD+S +A A +N Sbjct: 112 LIETTL--DLIGEKRNEPLSILDLGTGSGAIVCALLSELPRARAVAVDLSPQACAAAANN 169 Query: 141 AVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200 G S R ++ W +++ FD+IVSNPPY+ + + L EVR DP ++LDGGI Sbjct: 170 LARCGFSNRASVMRGRWAAALSERFDIIVSNPPYVRAGEIPQLDPEVRLHDPALALDGGI 229 Query: 201 DGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 DGL YR I D + R + DGL + E+G +Q V V + ++ + +D GG++RV+ Sbjct: 230 DGLDCYREIIDDLPRLVADDGLVAFEVGSDQAVSVASLLGAQGFGVERVGRDLGGHERVV 289 Query: 261 LFCR 264 R Sbjct: 290 AARR 293 >gi|163743156|ref|ZP_02150538.1| modification methylase, HemK family protein [Phaeobacter gallaeciensis 2.10] gi|161383573|gb|EDQ07960.1| modification methylase, HemK family protein [Phaeobacter gallaeciensis 2.10] Length = 285 Score = 153 bits (386), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 98/259 (37%), Positives = 140/259 (54%), Gaps = 14/259 (5%) Query: 5 RDSHSFLCRVTGLSSHQV-IVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63 RD+ L + + +V ++ P+ + + + +R+++ H ++G R+FY Sbjct: 28 RDARVLLAHAARIEASRVTLIAPEDLAPEIAERYEQLIALRAIRVPVSH-LIGEREFYGR 86 Query: 64 RLTLSSDTFEPRPETELLVDSALA--FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 R +S D +PRPETE L+++ALA FS R+LDLG G+G + + LL E Sbjct: 87 RFKVSGDVLDPRPETECLIEAALAEPFS----------RVLDLGLGSGCILVTLLAEQAD 136 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181 GVGVD+S A A +NAV + V R + LQSDWFS+VEG FD+IVSNPPYI + Sbjct: 137 ATGVGVDLSEAACLQASANAVLHRVEPRAEILQSDWFSAVEGQFDLIVSNPPYIALDEMS 196 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 L EVR +P ++L G DGL YR IA + +L G +EIG Q V + S Sbjct: 197 DLSDEVRGHEPELALTDGGDGLGAYRVIAAELGGYLAPQGRVFLEIGPTQGAAVSDLLLS 256 Query: 242 RKLFLVNAFKDYGGNDRVL 260 L V +D G DRV+ Sbjct: 257 AGLKEVRIIQDLDGRDRVV 275 >gi|163739712|ref|ZP_02147120.1| modification methylase, HemK family protein [Phaeobacter gallaeciensis BS107] gi|161386942|gb|EDQ11303.1| modification methylase, HemK family protein [Phaeobacter gallaeciensis BS107] Length = 285 Score = 153 bits (386), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 97/259 (37%), Positives = 140/259 (54%), Gaps = 14/259 (5%) Query: 5 RDSHSFLCRVTGLSSHQV-IVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63 RD+ L + + +V ++ P+ + + + +R+++ H ++G R+FY Sbjct: 28 RDARVLLAHAARIEASRVTLIAPEDLAPEIAERYEQLIALRAIRVPVSH-LIGEREFYGR 86 Query: 64 RLTLSSDTFEPRPETELLVDSALA--FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 R +S D +PRPETE L+++ALA FS R+LDLG G+G + + LL E Sbjct: 87 RFKVSGDVLDPRPETECLIEAALAEPFS----------RVLDLGLGSGCILVTLLAEQAD 136 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181 GVGVD+S A A +NAV + V R + LQSDWFS+V+G FD+IVSNPPYI + Sbjct: 137 ATGVGVDLSEAACLQASANAVLHRVEPRAEVLQSDWFSAVDGQFDLIVSNPPYIALDEMS 196 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 L EVR +P ++L G DGL YR IA + +L G +EIG Q V + S Sbjct: 197 GLSDEVRGHEPEMALTDGGDGLGAYRVIAAELGGYLAPQGRVFLEIGPTQGAAVSDLLLS 256 Query: 242 RKLFLVNAFKDYGGNDRVL 260 L V +D G DRV+ Sbjct: 257 AGLKEVRVIQDLDGRDRVV 275 >gi|255264803|ref|ZP_05344145.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Thalassiobium sp. R2A62] gi|255107138|gb|EET49812.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Thalassiobium sp. R2A62] Length = 277 Score = 153 bits (386), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 90/252 (35%), Positives = 132/252 (52%), Gaps = 14/252 (5%) Query: 17 LSSHQVIVDPDSVL----DD---RQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69 L++H + V PD + DD Q+ L I R HE + +++G R F+ ++ Sbjct: 29 LAAHVLQVSPDRMTLHMGDDVTAGQKAQLHVLIARRAAHEPVSKLIGQRAFWGRDFAVTP 88 Query: 70 DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129 D +PRPETE L+++ L R+LDLGTG+GA+ + L E D+ Sbjct: 89 DVLDPRPETECLIEACLGAG-------PAARVLDLGTGSGAIAVTLAAEWDAAAVTATDL 141 Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRD 189 S AL++A+ NAV + V R + + SDWF +V+G +D+IVSNPPYI + L EVR Sbjct: 142 SHAALDVARQNAVRHDVGARIEFVGSDWFDAVDGCYDLIVSNPPYIALAEMTGLAPEVRG 201 Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249 DPR++L DGL+ YR I DG + G +VEIG Q V + + L + Sbjct: 202 HDPRMALTDEADGLTCYRIICDGALAKMVSGGRLAVEIGPTQGDAVALMMQEAGLVEIEI 261 Query: 250 FKDYGGNDRVLL 261 D G +RV+L Sbjct: 262 RPDLDGRNRVVL 273 >gi|145629733|ref|ZP_01785529.1| HemK [Haemophilus influenzae 22.1-21] gi|144978070|gb|EDJ87849.1| HemK [Haemophilus influenzae 22.1-21] Length = 264 Score = 152 bits (385), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 98/261 (37%), Positives = 144/261 (55%), Gaps = 12/261 (4%) Query: 10 FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69 L TG Q++ D+ +D++ R LT + R LK E I ILG ++F+++ L +S Sbjct: 2 LLQYATGKPRTQILAFDDTEIDEKVRLKLTALLDRRLKGEPIAYILGEKEFWSLPLNVSK 61 Query: 70 DTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALLKE--------SP 120 T PRP+TE+LV+ AL SL ++E+ RILDLGTGTGA+ LAL E Sbjct: 62 GTLIPRPDTEVLVEKALQISLEKLEQNPPHFRILDLGTGTGAIALALASELFSICQKRQI 121 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180 + +GVD+ + +A+SNA N ++ +F LQS WF ++ G FD+IVSNPPYI+ Sbjct: 122 SLEIIGVDLMPDVVALAQSNAERNQLNVQF--LQSRWFDNITGKFDLIVSNPPYIDVQDE 179 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 +VR F+P +L G + R I + +LN +G +E G+ Q V IF+ Sbjct: 180 HLHQGDVR-FEPLSALVANDAGYADLRYIIESAPNYLNFNGTLLLEHGWQQGEKVRSIFQ 238 Query: 241 SRKLFLVNAFKDYGGNDRVLL 261 +V +DYG N+RV L Sbjct: 239 ENHWEMVETVRDYGDNERVTL 259 >gi|240950072|ref|ZP_04754374.1| HemK-like protein/protein-glutamine N-methyl transferase [Actinobacillus minor NM305] gi|240295447|gb|EER46202.1| HemK-like protein/protein-glutamine N-methyl transferase [Actinobacillus minor NM305] Length = 289 Score = 152 bits (385), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 95/257 (36%), Positives = 143/257 (55%), Gaps = 6/257 (2%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D++ L VT S + ++VL + + L + R K E I ILG ++F+++ L Sbjct: 29 DANILLQAVTKRSKSAIFAFSETVLSEAELIELNALLARRAKGEPIAYILGEKEFWSLPL 88 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE-SPFFKG 124 +S+ T PRP+TE LV+ AL ++ R+ ++ ++ILDLGTGTGA+ LAL E Sbjct: 89 AVSTATLIPRPDTECLVEVALEWAYKRLNSQETLQILDLGTGTGAIALALASELGKKADI 148 Query: 125 VGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDC 182 +G+D +A+E+A+ N G RF LQSDWFS +E FD+IVSNPPYI+ + Sbjct: 149 IGLDKQSEAVELAEKNRQKLGFKNVRF--LQSDWFSVLENHCFDLIVSNPPYIDKDDENL 206 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 +VR F+P +L GLS + I + +L K G +E G+ Q +V +IF Sbjct: 207 TKGDVR-FEPLTALVAEQHGLSDLQKIIENAPLYLAKQGALMLEHGWQQAAEVQQIFRQN 265 Query: 243 KLFLVNAFKDYGGNDRV 259 + + FKDYG DR+ Sbjct: 266 QWDKIETFKDYGNQDRI 282 >gi|163850387|ref|YP_001638430.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Methylobacterium extorquens PA1] gi|163661992|gb|ABY29359.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Methylobacterium extorquens PA1] Length = 296 Score = 152 bits (384), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 92/224 (41%), Positives = 133/224 (59%), Gaps = 6/224 (2%) Query: 40 NAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV 99 A R L E + RILG +F+ + L +T PRP+TE +V++AL LP E+ + Sbjct: 67 QAAERRLAGEPVARILGAWEFWGLPFALGPETLVPRPDTESVVETALRL-LP--EREQPL 123 Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R++DLGTG+G + +ALL E P G+G+D S AL +A+ NA NGV++R L W Sbjct: 124 RLIDLGTGSGCILVALLHERPGALGIGLDRSAAALAVARRNAAANGVADRAAFLCGSWLD 183 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH--- 216 +++G FD+IVSNPPYI + ++ L EVR DP+ +LDGG DGL YR I V+R Sbjct: 184 ALKGPFDLIVSNPPYIAAPVIATLEPEVRLHDPQAALDGGADGLDAYRAILADVARRPGL 243 Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 L+ G +EIGY+Q + R+ + + +D GNDRV+ Sbjct: 244 LSAQGALVLEIGYDQANALTRLAQEAGFEDIGVGRDLAGNDRVV 287 >gi|117926779|ref|YP_867396.1| HemK family modification methylase [Magnetococcus sp. MC-1] gi|117610535|gb|ABK45990.1| [protein release factor]-glutamine N5-methyltransferase [Magnetococcus sp. MC-1] Length = 289 Score = 152 bits (384), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 97/263 (36%), Positives = 139/263 (52%), Gaps = 8/263 (3%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVL--DDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63 D L L + +DPD L D+ QR+ I R E + I+G + F + Sbjct: 31 DGELLLAHTLTLRRLDLFLDPDRPLSPDELQRY--KAFIKRRAAREPVAYIVGKKPFLHW 88 Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 LT+++ PRPETE LV +A F ++R ILD+GTG+GA+ LALL + Sbjct: 89 ELTVTAGVLIPRPETEHLVQAAQDFF--NQQQRAPHTILDIGTGSGAILLALLDHFNEAQ 146 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVD 181 G+G+DIS AL A+ N ++ R L S + + E FD+I+SNPPYI S ++ Sbjct: 147 GIGIDISKAALACAQHNGEQLNLNNRAQWLYSHFCDDLPHESRFDLILSNPPYINSDVIP 206 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 L EV ++PR++LDGG+DG+ Y+ I LN GL VEIG++Q V + + Sbjct: 207 TLEAEVNQWEPRLALDGGVDGMQAYQQIIPAAVARLNPGGLLGVEIGHDQGPRVAALMQQ 266 Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264 L V KDY +DRV+L R Sbjct: 267 HGLQQVVVHKDYAQHDRVVLGHR 289 >gi|254510882|ref|ZP_05122949.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Rhodobacteraceae bacterium KLH11] gi|221534593|gb|EEE37581.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Rhodobacteraceae bacterium KLH11] Length = 285 Score = 152 bits (384), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 96/257 (37%), Positives = 137/257 (53%), Gaps = 10/257 (3%) Query: 5 RDSHSFLCRVTGLSSHQV-IVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63 RD+ L + + +V ++ P+ + D + +R+++ H +LG R+FY Sbjct: 28 RDARVLLAHAARIEASRVTLIAPEELPVDIAERYDQLISLRAIRVPVSH-LLGEREFYGR 86 Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 R +S D +PRPETE L+++AL+ E D +LDLG G+G + + LL E Sbjct: 87 RFKVSRDVLDPRPETEALIEAALS------EPFD--HVLDLGVGSGCILITLLAERASAA 138 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183 GVGVD+S A A +NAV + V R + QSDWF ++EG FD+IVSNPPYI + + L Sbjct: 139 GVGVDLSESACLQASANAVQHQVQGRVEIRQSDWFENIEGQFDLIVSNPPYISADEMQEL 198 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 EVR+ +PRI+L DGL YR IA L G VEIG Q V +F++ Sbjct: 199 SPEVREHEPRIALTDEGDGLDAYRRIAAAAPDFLTPGGRILVEIGPTQGAYVSALFDAAG 258 Query: 244 LFLVNAFKDYGGNDRVL 260 L D G DRV+ Sbjct: 259 LTGTQVIPDLDGRDRVV 275 >gi|157804238|ref|YP_001492787.1| tRNA (guanine-N(7)-)-methyltransferase [Rickettsia canadensis str. McKiel] gi|157785501|gb|ABV74002.1| tRNA (guanine-N(7)-)-methyltransferase [Rickettsia canadensis str. McKiel] Length = 323 Score = 152 bits (383), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 87/277 (31%), Positives = 145/277 (52%), Gaps = 25/277 (9%) Query: 10 FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69 L V +++ D L+ + + R LKHE I I+G ++FY+ ++ Sbjct: 31 LLQHVINTPLQYLLIKLDEQLNQSEIEAFEKLLERRLKHEPIAYIIGVKEFYSREFIVNK 90 Query: 70 DTFEPRPETELLVDSALAFSLPRIEKRDV-----------------------VRILDLGT 106 PR +TELLVD +A + R R+ ++IL+LGT Sbjct: 91 HVLIPRGDTELLVDIVVAL-VKRCHYRESRNPVNHYMDTCLRGYDTRLQTNNIKILELGT 149 Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-F 165 G+G + ++LL E P + DIS A+E+A++NA+ + V++ + S+WF ++E F Sbjct: 150 GSGCIAISLLCELPNANVIATDISLDAIEVARNNALKHHVTDHIQIIHSNWFENIENQKF 209 Query: 166 DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225 D IVSNPPYI + + +E +++P ++L +GL Y+TIA+ + L ++G ++ Sbjct: 210 DFIVSNPPYISNTEKSEMAIETINYEPHLALFAEENGLQSYKTIAENAKKFLKQNGKLAL 269 Query: 226 EIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262 EIG+ QK V++IF + L N +KD G RV+LF Sbjct: 270 EIGFKQKETVIQIFLDQGYNLENVYKDLQGYSRVILF 306 >gi|218528947|ref|YP_002419763.1| modification methylase, HemK family [Methylobacterium chloromethanicum CM4] gi|218521250|gb|ACK81835.1| modification methylase, HemK family [Methylobacterium chloromethanicum CM4] Length = 296 Score = 152 bits (383), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 93/224 (41%), Positives = 133/224 (59%), Gaps = 6/224 (2%) Query: 40 NAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV 99 A R L E + RILG +F+ + L +T PRP+TE +V++AL LP E+ + Sbjct: 67 QAAERRLAGEPVARILGAWEFWGLPFALGPETLVPRPDTESVVETALRL-LP--ERERPL 123 Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R++DLGTG+G + +ALL E P G+G+D S AL +A+ NA NGV++R L W Sbjct: 124 RLIDLGTGSGCILVALLHERPGALGIGLDRSAAALAVARRNAAANGVADRAAFLCGSWLD 183 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH--- 216 ++EG FD+IVSNPPYI + ++ L EVR DP+ +LDGG DGL YR I V+R Sbjct: 184 ALEGPFDLIVSNPPYIAAPVIATLEPEVRLHDPQAALDGGADGLDAYRAILADVARRPGL 243 Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 L+ G +EIGY+Q + R+ + + +D GNDRV+ Sbjct: 244 LSVQGALVLEIGYDQANALTRLAQEAGFEDIAVGRDLAGNDRVV 287 >gi|319776410|ref|YP_004138898.1| N5-glutamine methyltransferase, modifies release factors RF-1 and RF-2 [Haemophilus influenzae F3047] gi|329123574|ref|ZP_08252136.1| protein methyltransferase HemK [Haemophilus aegyptius ATCC 11116] gi|317451001|emb|CBY87231.1| N5-glutamine methyltransferase, modifies release factors RF-1 and RF-2 [Haemophilus influenzae F3047] gi|327470316|gb|EGF15776.1| protein methyltransferase HemK [Haemophilus aegyptius ATCC 11116] Length = 292 Score = 151 bits (382), Expect = 7e-35, Method: Compositional matrix adjust. Identities = 97/265 (36%), Positives = 149/265 (56%), Gaps = 12/265 (4%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L TG S Q++ D+ +D++ R LT + R LK E I ILG ++F+++ L Sbjct: 26 DALVLLQHATGKSRTQILAFDDTEIDEKVRLKLTALLDRRLKGEPIAYILGEKEFWSLPL 85 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALLKE-SPFFK 123 +S T PRP+TE+LV+ AL +L ++E+ ILDLGTGTGA+ LAL E +P + Sbjct: 86 NVSKSTLIPRPDTEILVEKALQIALEKLEENPPHFCILDLGTGTGAIALALASELAPICQ 145 Query: 124 G-------VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE 176 +GVD+ + +A+SN N ++ +F LQS WF ++ G FD+IVSNPPYI+ Sbjct: 146 KQHIPLEIIGVDLMPDVVALAQSNTERNQLNVQF--LQSCWFDNITGKFDLIVSNPPYID 203 Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236 + +V F+P +L +G + R I + +LN +G+ +E G+ Q V Sbjct: 204 AQDEHLHQGDV-SFEPLSALVANDEGYADLRHIIELAPSYLNSNGVLLLEHGWQQGEKVR 262 Query: 237 RIFESRKLFLVNAFKDYGGNDRVLL 261 IF+ +V +DYG N+RV L Sbjct: 263 SIFQENHWEMVETVRDYGDNERVTL 287 >gi|83310718|ref|YP_420982.1| methylase of polypeptide chain release factor [Magnetospirillum magneticum AMB-1] gi|82945559|dbj|BAE50423.1| Methylase of polypeptide chain release factor [Magnetospirillum magneticum AMB-1] Length = 283 Score = 151 bits (382), Expect = 7e-35, Method: Compositional matrix adjust. Identities = 89/259 (34%), Positives = 137/259 (52%), Gaps = 3/259 (1%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ + V G+ ++ + L + L + R E + ILG R F+ + Sbjct: 26 DARLLVAEVLGVEMRRLPASHHAELTGDEAARLAALLERRAAREPMSHILGRRGFWTLEF 85 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 +++DT +PRP+TE L+++ L R R R+LD GTGTG + L LL E G+ Sbjct: 86 AVTADTLDPRPDTETLIEAVLDALEDRGRPR---RLLDFGTGTGCILLTLLSELGHATGL 142 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185 G+D S AL +A NA++ G++ R + DW + G FDVIVSNPPYI +D L Sbjct: 143 GIDASPAALAVAGRNALSLGLAPRAEFRLGDWGEGLNGQFDVIVSNPPYIPDAEIDGLEP 202 Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245 EV ++PR +L GG DGL YR + ++R L G+ ++E+G Q VDV + + L Sbjct: 203 EVARYEPRSALAGGSDGLECYRRLIPHMARLLAPGGIAALEVGAGQAVDVCALLAAAGLA 262 Query: 246 LVNAFKDYGGNDRVLLFCR 264 + +D GG +R ++ R Sbjct: 263 GASVRRDLGGIERCVIVRR 281 >gi|297181250|gb|ADI17444.1| methylase of polypeptide chain release factors [uncultured Rhodospirillales bacterium HF0070_31K06] Length = 211 Score = 151 bits (381), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 84/211 (39%), Positives = 120/211 (56%), Gaps = 3/211 (1%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110 + I G R+F ++R +++D +PRP++E+L+++ALA LP + +LDLGTGTG Sbjct: 1 MSHITGSREFRSLRFEVTADVLDPRPDSEVLIEAALAL-LP--ATGEPFNVLDLGTGTGC 57 Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170 + LA+L E P G+GVD+S AL +A+ NA G++ER + DW + + G FD+++S Sbjct: 58 LLLAVLNERPAATGIGVDLSEAALAVARRNAWKLGLAERAQFRRGDWSNGLGGTFDLVLS 117 Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230 NPPYI S +D L EV +PR++LDGG DGL YR IA + L G VE G Sbjct: 118 NPPYIPSAEIDQLEPEVACHEPRLALDGGADGLDAYRAIAQRTPQLLANKGALIVEFGTG 177 Query: 231 QKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 Q V IF L D G R + Sbjct: 178 QAEAVCAIFAQHGLAEARLECDLAGRPRCFI 208 >gi|159044281|ref|YP_001533075.1| putative protein methyltransferase [Dinoroseobacter shibae DFL 12] gi|157912041|gb|ABV93474.1| putative protein methyltransferase [Dinoroseobacter shibae DFL 12] Length = 274 Score = 150 bits (380), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 83/225 (36%), Positives = 127/225 (56%), Gaps = 8/225 (3%) Query: 36 FFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEK 95 + L +A+ + + +I+G R F+ ++ D +PRP+TE LV+ ALA Sbjct: 53 YTLEDAVKARAARQPVSQIIGRRAFFKHDFEVTPDVLDPRPDTETLVEVALAHPF----- 107 Query: 96 RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155 D V LD+G+G+G + L+LL E P G+G+DIS AL++A+ NA G++ R +S Sbjct: 108 -DTV--LDIGSGSGCILLSLLAERPEATGLGIDISAPALDVARRNADRLGLAGRARFRRS 164 Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215 DW + V+ FD+IVSNPPYI++ L E+RD++PR +L+ G DGL YR IA R Sbjct: 165 DWLAEVDEQFDLIVSNPPYIDAATYATLAPELRDWEPRGALEAGADGLDAYRVIARDAPR 224 Query: 216 HLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 L G +EIG++Q V + + + +D G DRV+ Sbjct: 225 VLAPGGTLCLEIGHDQGRSVPALLAASGWRQITVQRDLIGKDRVV 269 >gi|188580161|ref|YP_001923606.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Methylobacterium populi BJ001] gi|179343659|gb|ACB79071.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Methylobacterium populi BJ001] Length = 296 Score = 150 bits (380), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 94/226 (41%), Positives = 136/226 (60%), Gaps = 6/226 (2%) Query: 38 LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97 L A R L E + RILG +F+ + LS DT PRP+TE +V++AL P E++ Sbjct: 65 LGRAAARRLAGEPVARILGAWEFWGLPFALSPDTLVPRPDTESVVEAALGL-FPERERK- 122 Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 +R++DLGTG+G + +ALL E P G+G+D + AL +A++NA NGV++R L W Sbjct: 123 -LRLIDLGTGSGCILVALLHERPRAYGIGLDRAQGALAVARNNAAANGVADRASFLCGSW 181 Query: 158 FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH- 216 ++ G FD+IVSNPPYI + ++ L EVR DPR +LDGG DGL YR I G++R Sbjct: 182 LDALSGPFDLIVSNPPYIAAPVIATLEPEVRLHDPRAALDGGDDGLDAYRAILAGLARRP 241 Query: 217 --LNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 L+ G +EIGY+Q + + ++ V +D GNDRV+ Sbjct: 242 GLLSAQGALVLEIGYDQGPALTDLAQAMGFADVRVGRDLAGNDRVV 287 >gi|145637545|ref|ZP_01793202.1| HemK [Haemophilus influenzae PittHH] gi|145269231|gb|EDK09177.1| HemK [Haemophilus influenzae PittHH] Length = 292 Score = 150 bits (380), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 99/261 (37%), Positives = 146/261 (55%), Gaps = 12/261 (4%) Query: 10 FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69 L VTG S Q++ D+ +D++ R LT + R LK E I ILG ++F+++ L +S Sbjct: 30 LLQHVTGKSRTQILAFDDTEIDEKVRLKLTALLDRRLKGEPIAYILGEKEFWSLPLNVSK 89 Query: 70 DTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALLKE-SPF------ 121 T PRP+TE LV+ AL +L ++E+ ILDLGTGTGA+ LAL E +P Sbjct: 90 STLIPRPDTESLVEKALQIALEKLEENPPHFHILDLGTGTGAIALALASELAPICQKRHI 149 Query: 122 -FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180 + +GVD+ + +A+SNA N ++ +F LQS WF ++ G FD+IVSNPPYI++ Sbjct: 150 PLEIIGVDLMPDVVALAQSNAERNQLNVQF--LQSSWFDNITGKFDLIVSNPPYIDAQDE 207 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 +V F+P +L G + R I + S +LN +G+ +E G+ Q V IF Sbjct: 208 HLHQGDV-SFEPLSALVANDAGYADLRHIIELASSYLNSNGVLLLEHGWQQGEKVRSIFL 266 Query: 241 SRKLFLVNAFKDYGGNDRVLL 261 +V DYG N+RV L Sbjct: 267 ENYWEMVETVCDYGDNERVTL 287 >gi|294085499|ref|YP_003552259.1| methylase of polypeptide chain release factor [Candidatus Puniceispirillum marinum IMCC1322] gi|292665074|gb|ADE40175.1| Methylase of polypeptide chain release factor [Candidatus Puniceispirillum marinum IMCC1322] Length = 289 Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 87/235 (37%), Positives = 134/235 (57%), Gaps = 4/235 (1%) Query: 32 DRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLP 91 D ++ L + R + E + RI GWR+F+++R LSS T +PRP++E++V +A+A + Sbjct: 51 DMEKALLETLVARRIAREPVSRIRGWREFWSLRFALSSATLDPRPDSEIIVATAIAAAKA 110 Query: 92 R--IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 R + +++LDLGTG+G + LA L E P G+G+DIS AL A++NA G++E+ Sbjct: 111 RSIVNPAKQLKLLDLGTGSGCLLLACLSELPDAVGLGLDISEDALATARNNATALGLAEQ 170 Query: 150 FDTLQSDWFSSVE--GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207 Q + + G FD+I+ NPPYI + + L EV ++P +LDGG DGL +R Sbjct: 171 SRFYQHSFMDEMSQFGSFDIILCNPPYIPAAEITALEPEVARYEPMRALDGGADGLDCWR 230 Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262 + V L G VEIG Q+ DV+++ E + V KD G R L+F Sbjct: 231 GLMTVVPSCLAAGGCLVVEIGAGQEDDVIQLAEMANMTCVEMHKDLAGITRCLMF 285 >gi|154246563|ref|YP_001417521.1| HemK family modification methylase [Xanthobacter autotrophicus Py2] gi|154160648|gb|ABS67864.1| modification methylase, HemK family [Xanthobacter autotrophicus Py2] Length = 286 Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 94/260 (36%), Positives = 141/260 (54%), Gaps = 4/260 (1%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L + G + +++ D+ + R E + RI G R+F+++ L Sbjct: 29 DARLLLAQALGCAPGDLLLRADAPVPSEAEVTARAFTKRRAGGEPVARIRGRREFWSLDL 88 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 LS DT PRP+TE LV++ALA +LP ++ + ILDLGTGTGA+ ALL E P G+ Sbjct: 89 HLSPDTLVPRPDTETLVEAALA-ALP--DRTAPLSILDLGTGTGAILAALLVECPNATGI 145 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185 VD S A A++N NG++ R + DW +++ G FD++VSNPPYI S + L Sbjct: 146 AVDRSEGAALTARANLARNGLAARAHVMVGDWGTALAGGFDLVVSNPPYITSSAMLDLPA 205 Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245 EVR DP ++L+ G DGL Y IA + R + + G+ +E+G Q+ V + + L Sbjct: 206 EVRLHDPHLALEAGADGLLAYEAIAADLPRLVRRGGIAVLELGEGQEAAVAALVAAAGLE 265 Query: 246 LVN-AFKDYGGNDRVLLFCR 264 + A +D G R LL R Sbjct: 266 VAGPARRDLSGIPRALLARR 285 >gi|149914650|ref|ZP_01903180.1| modification methylase, HemK family, putative [Roseobacter sp. AzwK-3b] gi|149811443|gb|EDM71278.1| modification methylase, HemK family, putative [Roseobacter sp. AzwK-3b] Length = 278 Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 88/212 (41%), Positives = 122/212 (57%), Gaps = 9/212 (4%) Query: 49 ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108 E + +LG+R+FY R + + +PRPETE LV+ ALA + R+ LDLGTG+ Sbjct: 70 EPMAHLLGYREFYGRRFAVDARVLDPRPETETLVERALAVAFSRV--------LDLGTGS 121 Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVI 168 G + L+LL E P GVGVD+S ALE+A+ NA +S R + L SDWF++V G FD+I Sbjct: 122 GCILLSLLAERPDATGVGVDLSEDALEVARRNAARLDLSARCEFLVSDWFAAVRGTFDLI 181 Query: 169 VSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228 VSNPPYI + + L E++ ++PR++L GLS YR I L + G VEIG Sbjct: 182 VSNPPYIAADEMAGLARELQ-YEPRMALTDEGCGLSAYRAIVAEAGACLVEGGRLIVEIG 240 Query: 229 YNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 + Q DV + + V D G DRV+ Sbjct: 241 WRQGADVADLMRAGGFAEVCVRPDLDGRDRVV 272 >gi|182677818|ref|YP_001831964.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Beijerinckia indica subsp. indica ATCC 9039] gi|182633701|gb|ACB94475.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Beijerinckia indica subsp. indica ATCC 9039] Length = 306 Score = 150 bits (378), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 93/258 (36%), Positives = 139/258 (53%), Gaps = 7/258 (2%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ LC G+ +I DP + D+ + L R L E + RI+G R+F+++ L Sbjct: 49 DARLLLCAALGIDHAGLIRDPAEPIGDKAKV-LDAFCRRRLAREPVSRIIGEREFWSLDL 107 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV--RILDLGTGTGAVCLALLKESPFFK 123 L +PRP+TE L+D L + KR R+LDLGTG+GA+ ALL E P Sbjct: 108 KLDPAVLDPRPDTETLID----LVLREVGKRACPPQRVLDLGTGSGAILAALLTEWPEAF 163 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183 GVGVD+S + IA N G+ +R W +++ G FD+IVSNPPYI +D L Sbjct: 164 GVGVDLSPRTCAIAAGNFARLGLGDRAAVFCGRWSAALSGRFDLIVSNPPYIVLDEIDTL 223 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 EV +DPR++LDGG DG YR + ++ L + GL ++E G Q + + + + Sbjct: 224 APEVSLYDPRLALDGGPDGFDAYRALLPPLASLLAEGGLVALECGAGQSPILQDLLRAAQ 283 Query: 244 LFLVNAFKDYGGNDRVLL 261 L ++ D G++RV+L Sbjct: 284 LEPMSIGLDLSGHERVVL 301 >gi|77920282|ref|YP_358097.1| putative protoporphyrinogen oxidase [Pelobacter carbinolicus DSM 2380] gi|77546365|gb|ABA89927.1| [protein release factor]-glutamine N5-methyltransferase [Pelobacter carbinolicus DSM 2380] Length = 287 Score = 150 bits (378), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 95/258 (36%), Positives = 143/258 (55%), Gaps = 11/258 (4%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 RD+ L G+ + ++ D L++ + +V+ + E + ILG +F+++ Sbjct: 28 RDAELLLGASLGMDRVGLYLNFDRPLEESELTAYRALVVKRARREPLQYILGETEFWSLP 87 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L++S PRP+TE+LV+ AL + + R+LD+GTG+GA+ +AL E + Sbjct: 88 LSVSPAVLIPRPDTEVLVEEALRVA-------NGSRVLDVGTGSGAIAIALAHELADAQV 140 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184 V +DI +AL +A NA NGV +R L+ D EG FD+IVSNPPYI + +D L Sbjct: 141 VALDICPQALAVAADNARRNGVDDRVRFLERDLAQLPEGPFDLIVSNPPYIPAADLDGLM 200 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 EVRDF+PR +L+GG DGL YR +A L G VE+G +Q V ++F+ Sbjct: 201 PEVRDFEPRQALNGGQDGLDPYRLLAAQADTCLVPGGWLLVEVGIDQAAAVRQLFDDAG- 259 Query: 245 FLVNAF--KDYGGNDRVL 260 LV+ F DYGG RV+ Sbjct: 260 -LVDGFVRDDYGGVPRVV 276 >gi|163793918|ref|ZP_02187892.1| Methylase of polypeptide chain release factor [alpha proteobacterium BAL199] gi|159181029|gb|EDP65546.1| Methylase of polypeptide chain release factor [alpha proteobacterium BAL199] Length = 294 Score = 150 bits (378), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 85/222 (38%), Positives = 125/222 (56%), Gaps = 5/222 (2%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALA-FSLPRIEKRDVVR 100 + R L E + RILG R F+ + L + DT +PRP+TE L+++A+A F+ ++ R Sbjct: 59 LARRLTREPVSRILGRRAFWTLDLIVGPDTLDPRPDTETLIEAAIAAFA----DREPPNR 114 Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 I+DLGTGTG + LA L P G+G+D S A+EIA++NAV N +S R + DW Sbjct: 115 IIDLGTGTGCLLLAALSAFPAATGLGIDKSKGAVEIARTNAVRNELSARAEFQTIDWDEL 174 Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220 + D+I+SNPPYIE + L EV FDPR +L GG DGL Y ++A + R + Sbjct: 175 PQDRGDLILSNPPYIEEATLSALAPEVVQFDPRDALSGGADGLEAYDSLAGVLPRLMAPQ 234 Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262 G+ +E+G Q+ V + + KD G +R L+ Sbjct: 235 GIAILELGAGQRSAVETLMIGVGFAVQEVRKDLGNIERALVL 276 >gi|255657439|ref|ZP_05402848.1| protein methyltransferase [Clostridium difficile QCD-23m63] gi|296449036|ref|ZP_06890826.1| protein-(glutamine-N5) methyltransferase [Clostridium difficile NAP08] gi|296879859|ref|ZP_06903832.1| protein-(glutamine-N5) methyltransferase [Clostridium difficile NAP07] gi|296262129|gb|EFH08934.1| protein-(glutamine-N5) methyltransferase [Clostridium difficile NAP08] gi|296429148|gb|EFH15022.1| protein-(glutamine-N5) methyltransferase [Clostridium difficile NAP07] Length = 282 Score = 150 bits (378), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 91/259 (35%), Positives = 142/259 (54%), Gaps = 7/259 (2%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L + G+ + ++ + L + Q+ L I I+ R+F + Sbjct: 24 DTELLLQKTLGVDRLYIHLNLNKELTEEQKTEFIGFAEERLNGRPIAYIVENREFMGLDF 83 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 + PRP+TE LV+ + EK+DV ILD+GTG+GA+ ++L K K + Sbjct: 84 FVKEGVLIPRPDTETLVEEIIEICR---EKKDV-SILDIGTGSGAITISLAKYIENSKIM 139 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG---LFDVIVSNPPYIESVIVDC 182 DIS ALEIAK NA+TN V E+ + SD F+++ FD+IVSNPPYI+ ++ Sbjct: 140 SFDISEIALEIAKKNAITNEVDEKIKYINSDLFTAISNSNIKFDIIVSNPPYIKKQDIET 199 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 L +V+D++P +L+GG DGL YR I + ++LNK G+ + E+G+NQ DV+ I +S Sbjct: 200 LHTQVKDYEPYNALEGGEDGLDFYRRITEQGKKYLNKFGILAYEVGHNQAEDVINIMKSN 259 Query: 243 KLFLVNAFKDYGGNDRVLL 261 + KD G DRV++ Sbjct: 260 GYKKIYTKKDIQGIDRVVI 278 >gi|27375330|ref|NP_766859.1| protoporphyrinogen oxidase [Bradyrhizobium japonicum USDA 110] gi|27348466|dbj|BAC45484.1| protoporphyrinogen oxidase [Bradyrhizobium japonicum USDA 110] Length = 297 Score = 150 bits (378), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 88/219 (40%), Positives = 124/219 (56%), Gaps = 4/219 (1%) Query: 44 RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEK-RDVVRIL 102 R + E + RILG R+F+ + LS T PRP+TE +V+ AL L R +K RI Sbjct: 74 RRIAGEPVARILGTREFWGLPFRLSDATLVPRPDTETVVERAL--ELFREQKATQQPRIA 131 Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162 D+GTG+GA+ LALL + P GVG D+S ALE A+ NAVT G+++R + + +++ Sbjct: 132 DIGTGSGAILLALLHDIPGAFGVGTDLSLNALETARGNAVTLGLADRSAFVACSYLAALR 191 Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL 222 G FD+IVSNPPYI S + L LEVR+ DP ++LDGG DG YR + + L G Sbjct: 192 GPFDLIVSNPPYIPSAEIPKLSLEVREHDPHLALDGGNDGYDAYRALIPQAAERLAPGGA 251 Query: 223 CSVEIGYNQKVDVVRIFESRKLFLVNAFK-DYGGNDRVL 260 VE G Q ++ + + L + K D G R + Sbjct: 252 LIVEAGQGQARNIETLLTAAALVVDRPPKADLAGIPRAV 290 >gi|302671178|ref|YP_003831138.1| methyltransferase HemK [Butyrivibrio proteoclasticus B316] gi|302395651|gb|ADL34556.1| methyltransferase HemK [Butyrivibrio proteoclasticus B316] Length = 287 Score = 149 bits (377), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 91/246 (36%), Positives = 134/246 (54%), Gaps = 7/246 (2%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 +A D+ L V G ++ PD + D +R + I R HE + ILG +F Sbjct: 23 EAKLDARLLLEYVCGTDHSTLLAHPDKEVTDEERDKYLSMIDRRAAHEPVAYILGTWNFM 82 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 + ++SD P +TE+LV+ AL D +R+LDL TG+G + L+LL + Sbjct: 83 GLDFKVNSDVLIPEQDTEILVEEALR------NLEDGMRVLDLCTGSGCIALSLLNYTNE 136 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIV 180 + V DIS KAL +A NA G+S+R + +++D F G FD+IVSNPPYI S ++ Sbjct: 137 TRAVCTDISDKALAVAGMNAERLGLSDRTEFVRTDLFPEESVGKFDLIVSNPPYIASKVI 196 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 D L EVRD++PR++LDG DGL YR I + + L G +EIGY+Q V + E Sbjct: 197 DTLAPEVRDYEPRLALDGSEDGLVFYRRIIEETPKFLYSSGYLLLEIGYDQGQAVKEMLE 256 Query: 241 SRKLFL 246 +K + Sbjct: 257 DKKYIM 262 >gi|260426432|ref|ZP_05780411.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Citreicella sp. SE45] gi|260420924|gb|EEX14175.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Citreicella sp. SE45] Length = 282 Score = 149 bits (377), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 97/262 (37%), Positives = 128/262 (48%), Gaps = 13/262 (4%) Query: 3 ALRDSHSFLCRVTGLSSHQV-IVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 A RD+ L V G++ ++ +V PD V + T I R E + + G R+FY Sbjct: 23 AARDARRLLAHVLGVAPGRLTLVLPDPVGAGAAGRYET-LIARRAAREPVSHLTGRREFY 81 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 ++SD +PRPETE LV AL+ R+LDLGTGTG + L LL E Sbjct: 82 GRAFHVTSDVLDPRPETETLVAEALSAPF--------ARVLDLGTGTGCILLTLLAERAT 133 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESV 178 G+G D+S AL +A N G+ R Q WF ++ G FD+IVSNPPYI Sbjct: 134 ATGIGTDLSEAALAVATRNRDALGLDGRATLGQGSWFEALPEGSGPFDLIVSNPPYIALD 193 Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238 + L EVRD +P ++L G DGL+ YR I HL G VEIG Q V + Sbjct: 194 EMAGLSPEVRDHEPHMALTDGGDGLAAYRAITRDAPAHLAPGGRLMVEIGPTQGPAVAAL 253 Query: 239 FESRKLFLVNAFKDYGGNDRVL 260 L V +D G DRV+ Sbjct: 254 MTGAGLADVTVLQDLDGRDRVV 275 >gi|217978069|ref|YP_002362216.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Methylocella silvestris BL2] gi|217503445|gb|ACK50854.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Methylocella silvestris BL2] Length = 296 Score = 149 bits (377), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 97/260 (37%), Positives = 129/260 (49%), Gaps = 6/260 (2%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ LC GL ++ DP + L R L R L E RILG R+F+ R Sbjct: 35 DARLLLCAALGLDHAGLLRDPGAPLGARGAQALERMAARRLAREPTSRILGAREFWGARF 94 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 L +PRP+TE LV+ L E RILDLG G+GA+ ALL P GV Sbjct: 95 HLGPAALDPRPDTETLVEVVL--DAVGAETGRAWRILDLGVGSGALLCALLASLPNAFGV 152 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPYIESVIVD 181 GVD++ A IA N G+ R + +DW + +E FD+IVSNPPYI + Sbjct: 153 GVDLAPAACAIADRNLAAQGLQGRGKLICADWAAPLEARSAARFDIIVSNPPYISRGDIA 212 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 L EVR +DP ++LDGG DGL YR + +R L +G ++EIG Q DV + Sbjct: 213 RLEPEVRIYDPLLALDGGEDGLDAYRAVIPTAARLLAPEGFVALEIGQGQGKDVDALLRD 272 Query: 242 RKLFLVNAFKDYGGNDRVLL 261 N D GG +R++L Sbjct: 273 ASFSARNFRLDLGGVERIIL 292 >gi|220930733|ref|YP_002507642.1| modification methylase, HemK family [Clostridium cellulolyticum H10] gi|220001061|gb|ACL77662.1| modification methylase, HemK family [Clostridium cellulolyticum H10] Length = 285 Score = 149 bits (377), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 88/260 (33%), Positives = 143/260 (55%), Gaps = 4/260 (1%) Query: 4 LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63 + ++ LC+V + D L ++ L + +V+ + + I+G +F ++ Sbjct: 23 VHEAGVMLCKVLKCGRTYLYSHGDRELSIDEKAVLDHMLVQRTGNIPLQYIVGDTEFMSL 82 Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 R ++ PR +TELLV+ + L + + ++LD+ TG+G + +++ P Sbjct: 83 RFLVTPAVLIPRQDTELLVEKTIDL-LNQGKTGTNKKVLDMCTGSGCIAVSIAYFCPECS 141 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVD 181 V D+S KAL++AK+N+ NGV R + D F +++G FD+IVSNPPYIE+ I+ Sbjct: 142 IVACDVSQKALDVAKANSELNGVQNRVELCCGDLFDAIKGGQKFDIIVSNPPYIETDIIA 201 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 L EVR ++P ++LDGG DGL YR I LN++G + EIGYNQ V + + Sbjct: 202 GLQKEVRSYEPGLALDGGADGLVFYRRIISSAPERLNRNGWLAFEIGYNQGEKVSALMK- 260 Query: 242 RKLFLVNAFKDYGGNDRVLL 261 + FKDYGGNDRV++ Sbjct: 261 ESFVDIQIFKDYGGNDRVVI 280 >gi|46202828|ref|ZP_00208676.1| COG2890: Methylase of polypeptide chain release factors [Magnetospirillum magnetotacticum MS-1] Length = 313 Score = 149 bits (377), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 83/199 (41%), Positives = 120/199 (60%), Gaps = 6/199 (3%) Query: 38 LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97 L A R L E + RILG +F+ + +L +T PRP+TE +V++AL P E+ Sbjct: 65 LGRAAERRLAGEPVARILGAWEFWGLPFSLGPETLVPRPDTESVVETALRL-FP--ERDR 121 Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 +R++DLGTG+G + +ALL E G+G+D + AL +A++NA NGV R L+ W Sbjct: 122 PLRLVDLGTGSGCILVALLHERLRAFGLGLDRAEGALRVARANAERNGVGARAAFLRGSW 181 Query: 158 FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH- 216 ++ G FD+IVSNPPYI + ++ L EVR+ DP +LDGG DGL YR I G++R Sbjct: 182 LDALVGPFDLIVSNPPYIAAPVIATLDTEVREHDPMAALDGGPDGLDAYRAILLGIARRP 241 Query: 217 --LNKDGLCSVEIGYNQKV 233 L+ G +EIGY+Q Sbjct: 242 DLLSPGGALVLEIGYDQAA 260 >gi|190151398|ref|YP_001969923.1| HemK-like protein [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|189916529|gb|ACE62781.1| HemK-like protein [Actinobacillus pleuropneumoniae serovar 7 str. AP76] Length = 314 Score = 149 bits (376), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 94/261 (36%), Positives = 146/261 (55%), Gaps = 4/261 (1%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D++ L VT + + ++ L + L + R L+ E + ILG +DF+++ L Sbjct: 53 DANLLLQAVTKRTKSAIFAFGETALHQTELAELAQLLARRLQGEPMAYILGEKDFWSLPL 112 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE-SPFFKG 124 +S T PRP+TE LV+ AL + R+E + ++ILDLGTGTGA+ LAL E + Sbjct: 113 KVSPHTLIPRPDTERLVEVALDWVYKRLESQQTLQILDLGTGTGAIALALASELGDKAQI 172 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183 +GVD +A+ +A++N G E LQSDWFS++E FD+IVSNPPYI+ + Sbjct: 173 IGVDFKPEAVTLAETNRQNLGF-ENVRFLQSDWFSALENRQFDLIVSNPPYIDKQDENLQ 231 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 +VR F+P +L +GLS + I + +L +G +E G+ Q V +IF+ + Sbjct: 232 YGDVR-FEPLSALVAEQNGLSDLQKIIENAPLYLLDNGALMLEHGWQQAQAVQQIFQQYQ 290 Query: 244 LFLVNAFKDYGGNDRVLLFCR 264 + +F+DYGGNDR+ R Sbjct: 291 WDEIESFQDYGGNDRLTKAVR 311 >gi|146337702|ref|YP_001202750.1| putative methyltransferase hemK modifies release factors RF-1 and RF-2 [Bradyrhizobium sp. ORS278] gi|146190508|emb|CAL74507.1| Putative protein methyltransferase hemK modifies release factors RF-1 and RF-2 [Bradyrhizobium sp. ORS278] Length = 295 Score = 149 bits (376), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 92/222 (41%), Positives = 124/222 (55%), Gaps = 18/222 (8%) Query: 31 DDRQRFFLTNAIV-RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL--- 86 DD QR +A+V R L E + RILG ++F+ + L LS+DT PRP+TE +V+ AL Sbjct: 59 DDAQRL---DALVQRRLAGEPVARILGHKEFWGLELRLSADTLVPRPDTETVVELALDHL 115 Query: 87 ----AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142 A + P +RI DLGTG+GA+ LALL E P GVG DIS AL A+ NA Sbjct: 116 SAGGALTRP-------LRIGDLGTGSGAILLALLSELPRASGVGTDISIAALTTARENAR 168 Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202 G+++R + + +++ FD+IVSNPPYI S + L EV DP +LDGG DG Sbjct: 169 ALGLNDRAAFVACSYATALAPPFDLIVSNPPYIPSADIAGLATEVHAHDPLRALDGGGDG 228 Query: 203 LSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 L+ YRT+ + L G VE+G Q DV + L Sbjct: 229 LAAYRTLIPQAALLLQTGGAVIVEVGQGQSGDVAGLMTEAGL 270 >gi|303240124|ref|ZP_07326645.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Acetivibrio cellulolyticus CD2] gi|302592393|gb|EFL62120.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Acetivibrio cellulolyticus CD2] Length = 296 Score = 149 bits (376), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 92/263 (34%), Positives = 147/263 (55%), Gaps = 14/263 (5%) Query: 7 SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66 + + LC V G + D +L++ Q AI R + E + I G ++F ++ Sbjct: 41 AGAILCHVLGCDKAYLYSHDDYILNNSQFNSFLEAIKRRINGEPLQYITGSQEFMSLDFI 100 Query: 67 LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126 +S D PR +TE+LV+S + F+ + + ILD+GTG+G + ++L + Sbjct: 101 VSPDVLIPRQDTEILVESVIQFA----SGKGNIDILDVGTGSGCIAISLAYFIKNSRVTA 156 Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGL 185 VDIS ALE+A+ NA GV +R ++S+ F +V G FD+IVSNPPYI ++ L Sbjct: 157 VDISKGALEMARKNAQKCGVEDRITFIESNLFDNVTSGDFDIIVSNPPYIPVQDIETLEK 216 Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI----FES 241 +V+DF+PR +LDGG DGL YR I R+L +GL + E+GY+Q +V++I F++ Sbjct: 217 QVKDFEPRSALDGGCDGLDFYRRITKDSIRYLKPNGLLAFEVGYDQSQEVLKIMKDSFDN 276 Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264 K+ +D G +RV++ R Sbjct: 277 LKI-----ERDLAGIERVVMGIR 294 >gi|307262577|ref|ZP_07544208.1| hypothetical protein appser13_70 [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|306872075|gb|EFN03788.1| hypothetical protein appser13_70 [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 290 Score = 149 bits (376), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 94/261 (36%), Positives = 146/261 (55%), Gaps = 4/261 (1%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D++ L VT + + ++ L + L + R L+ E + ILG +DF+++ L Sbjct: 29 DANLLLQAVTKRTKSAIFAFGETALHQTELAELAQLLARRLQGEPMAYILGEKDFWSLPL 88 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE-SPFFKG 124 +S T PRP+TE LV+ AL + R+E + ++ILDLGTGTGA+ LAL E + Sbjct: 89 KVSPHTLIPRPDTERLVEVALDWVYKRLESQQTLQILDLGTGTGAIALALASELGDKAQI 148 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183 +GVD +A+ +A++N G E LQSDWFS++E FD+IVSNPPYI+ + Sbjct: 149 IGVDFKPEAVTLAETNRQNLGF-ENVRFLQSDWFSALENRQFDLIVSNPPYIDKQDENLQ 207 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 +VR F+P +L +GLS + I + +L +G +E G+ Q V +IF+ + Sbjct: 208 YGDVR-FEPLSALVAEQNGLSDLQKIIENAPLYLLDNGALMLEHGWQQAQAVQQIFQQYQ 266 Query: 244 LFLVNAFKDYGGNDRVLLFCR 264 + +F+DYGGNDR+ R Sbjct: 267 WDEIESFQDYGGNDRLTKAVR 287 >gi|145634874|ref|ZP_01790581.1| HemK [Haemophilus influenzae PittAA] gi|145267740|gb|EDK07737.1| HemK [Haemophilus influenzae PittAA] Length = 292 Score = 149 bits (376), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 96/265 (36%), Positives = 143/265 (53%), Gaps = 12/265 (4%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L TG Q++ D+ +D++ R LT + R L E I ILG ++F+++ L Sbjct: 26 DALVLLQYATGKPRTQILAFDDTEIDEKVRLKLTALLDRRLNGEPIAYILGEKEFWSLPL 85 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALLKE------ 118 +S T PRP+TE+LV+ AL +L ++E+ RILDLGTGTGA+ LAL E Sbjct: 86 NVSKGTLIPRPDTEILVEKALQIALVKLEENPPHFRILDLGTGTGAIALALASELSSICQ 145 Query: 119 --SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE 176 + +GVD+ + +A+SNA N ++ F LQS WF ++ G FD+I SNPPYI+ Sbjct: 146 KRQISLEIIGVDLMPDVVALAQSNAERNQLNVEF--LQSRWFENITGQFDLIASNPPYID 203 Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236 + +VR F+P +L G + R I + +LN +G +E G+ Q V Sbjct: 204 AQDEHLRQGDVR-FEPLSALVANDAGYADLRYIIESAPNYLNSNGALLLEHGWQQGEKVR 262 Query: 237 RIFESRKLFLVNAFKDYGGNDRVLL 261 IF +V +DYG N+RV L Sbjct: 263 SIFLENHWEIVETVRDYGDNERVTL 287 >gi|326202287|ref|ZP_08192156.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Clostridium papyrosolvens DSM 2782] gi|325987405|gb|EGD48232.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Clostridium papyrosolvens DSM 2782] Length = 284 Score = 149 bits (375), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 85/260 (32%), Positives = 141/260 (54%), Gaps = 5/260 (1%) Query: 4 LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63 ++++ LC+V + D L +R L N + + K+ + I+G +F ++ Sbjct: 23 VQEAGVMLCQVLNCGRAYLYAHGDRELSTDERAVLDNMLAQRAKNTPLQYIIGDTEFMSL 82 Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 + ++ PR +TE+LV+ + L + +++LD+ TG+G + +++ P Sbjct: 83 KFIVTPAVLIPRQDTEVLVEKVI--ELAKKSSNAGLKVLDMCTGSGCIAVSIAHFCPESS 140 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVD 181 V DIS +A+++AK+N+ NGV R + D F +++G FD IVSNPPYIE+ I+ Sbjct: 141 IVACDISEEAIKVAKANSDLNGVQNRVEFFCGDLFEALKGSYKFDFIVSNPPYIETEIII 200 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 L EVR ++P ++LDGG DGL Y+ I +LN G + EIG+NQ V + E Sbjct: 201 GLQKEVRSYEPELALDGGADGLDFYKIITVKAPEYLNNLGWLAFEIGFNQGERVSALME- 259 Query: 242 RKLFLVNAFKDYGGNDRVLL 261 + KDYGGNDRV++ Sbjct: 260 ESFINIQVIKDYGGNDRVVI 279 >gi|67459736|ref|YP_247360.1| bifunctional N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase/tRNA (m7G46) methyltransferase [Rickettsia felis URRWXCal2] gi|75535874|sp|Q4UJU4|HEMK_RICFE RecName: Full=Bifunctional methyltransferase; Includes: RecName: Full=HemK protein homolog; Includes: RecName: Full=tRNA (guanine-N(7)-)-methyltransferase; AltName: Full=tRNA(m7G46)-methyltransferase gi|67005269|gb|AAY62195.1| Methylase of polypeptide chain release factors, tRNA (guanine-N(7)-)-methyltransferase [Rickettsia felis URRWXCal2] Length = 527 Score = 149 bits (375), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 89/266 (33%), Positives = 143/266 (53%), Gaps = 24/266 (9%) Query: 22 VIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELL 81 ++++ D L++ + + R LKHE I I+G ++FY+ ++ PR +TE+L Sbjct: 43 LLINLDEQLNEVEIEAFEKLLERRLKHEPIAYIIGIKEFYSREFIVNKHVLIPRADTEVL 102 Query: 82 VD---------------------SALAFSLPRIEKR--DVVRILDLGTGTGAVCLALLKE 118 VD S +A S P R + +IL+LGTG+G + ++LL E Sbjct: 103 VDVCVHKSSLRATKRSVAISGILSKIASSTPMASSRNDEYTKILELGTGSGCIAISLLCE 162 Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIES 177 P + V DIS A+E+A++NA+ V++R + S+WF ++ + FDVIVSNPPYI + Sbjct: 163 LPNARVVATDISLDAIEVARNNALKYHVTDRIQIIHSNWFENLGKQKFDVIVSNPPYIST 222 Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237 + LE + +P I+L DGL YR IA+ + L +G +EIG+ Q+ V + Sbjct: 223 DEKPEMALETLNHEPYIALFAEEDGLQAYRIIAENAKKFLKPNGKIVLEIGFKQEEAVTQ 282 Query: 238 IFESRKLFLVNAFKDYGGNDRVLLFC 263 IF S + + +KD G+ RV+LF Sbjct: 283 IFLSNGYNIESVYKDLQGHSRVILFS 308 >gi|219870998|ref|YP_002475373.1| HemK-like protein/protein-glutamine N-methyl transferase [Haemophilus parasuis SH0165] gi|219691202|gb|ACL32425.1| HemK-like protein/protein-glutamine N-methyl transferase [Haemophilus parasuis SH0165] Length = 289 Score = 148 bits (374), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 93/262 (35%), Positives = 145/262 (55%), Gaps = 6/262 (2%) Query: 1 MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60 + A D++ L VT S + ++ L++ + L + R K E + ILG ++F Sbjct: 24 LNAKADANILLQAVTKRSKSAIFAFAETELNESELRQLAELLARRAKGEPMAYILGEKEF 83 Query: 61 YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE-S 119 +++ L +S+ T PRP+TE LV+ AL ++ R++ ++ILDLGTGTGA+ LAL E Sbjct: 84 WSLPLAVSTATLIPRPDTERLVEVALEWAYKRLDSSKNLQILDLGTGTGAIALALASELG 143 Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEGL-FDVIVSNPPYIES 177 + +G+D A+++A+ N G RF LQSDWF +++ FD+IVSNPPYI+ Sbjct: 144 TKAEIIGIDKQPDAVQLAEKNRQKLGFENVRF--LQSDWFEALKNQRFDLIVSNPPYIDK 201 Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237 + +VR F+P +L +GLS + I +L +G +E G+ Q V Sbjct: 202 DDENLTQGDVR-FEPLTALVAEQNGLSDLQKIIQNAPLYLTPNGALMLEHGWQQAASVQD 260 Query: 238 IFESRKLFLVNAFKDYGGNDRV 259 IF+ + V F+DYGGNDRV Sbjct: 261 IFQQNQWNAVTTFQDYGGNDRV 282 >gi|113461091|ref|YP_719159.1| peptide release factor glutamine N(5)-methylase [Haemophilus somnus 129PT] gi|112823134|gb|ABI25223.1| [protein release factor]-glutamine N5-methyltransferase [Haemophilus somnus 129PT] Length = 301 Score = 148 bits (374), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 97/264 (36%), Positives = 146/264 (55%), Gaps = 10/264 (3%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D++ L VT S ++ +++L + + LT +VR K E + +LG +F+ + L Sbjct: 29 DANLLLQTVTKRSKSAILAFSETLLTEDELKQLTELLVRRAKGEPMAYVLGETEFWTLNL 88 Query: 66 TLSSDTFEPRPETELLVDSALA-FSLPRIEK---RDVVRILDLGTGTGAVCLAL---LKE 118 ++ T PRP+TE+LV+ AL L + K + +RILDLGTGTGA+ LAL LK+ Sbjct: 89 QVAPYTLIPRPDTEILVEQALVCIQLLKKSKDFTQSSIRILDLGTGTGAIALALADELKK 148 Query: 119 S-PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIES 177 S F+ G+D+ A+++AK+NAV N ++E LQS+WF V G FD+IVSNPPYI++ Sbjct: 149 SGQHFEIFGLDVIADAVKLAKTNAVRNHLTE-VQFLQSNWFEQVTGQFDLIVSNPPYIDA 207 Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237 +VR F+P +L G + + I + +L K G VE G+ Q V Sbjct: 208 EDQHLNQGDVR-FEPLTALVAEKKGYADLQYIIEQAPNYLKKQGFLLVEHGWQQGQKVRS 266 Query: 238 IFESRKLFLVNAFKDYGGNDRVLL 261 F + V DYGGN+R+ L Sbjct: 267 FFAEKLWKQVETINDYGGNERITL 290 >gi|170717667|ref|YP_001784743.1| HemK family modification methylase [Haemophilus somnus 2336] gi|168825796|gb|ACA31167.1| modification methylase, HemK family [Haemophilus somnus 2336] Length = 301 Score = 148 bits (374), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 97/264 (36%), Positives = 146/264 (55%), Gaps = 10/264 (3%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D++ L VT S ++ +++L + + LT +VR K E + +LG +F+ + L Sbjct: 29 DANLLLQTVTKRSKSAILAFSETLLTEDELKQLTELLVRRAKGEPMAYVLGETEFWTLNL 88 Query: 66 TLSSDTFEPRPETELLVDSALA-FSLPRIEK---RDVVRILDLGTGTGAVCLAL---LKE 118 ++ T PRP+TE+LV+ AL L + K + +RILDLGTGTGA+ LAL LK+ Sbjct: 89 QVAPYTLIPRPDTEILVEQALVCIQLLKKSKDFTQSPIRILDLGTGTGAIALALADELKK 148 Query: 119 S-PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIES 177 S F+ G+D+ A+++AK+NAV N ++E LQS+WF V G FD+IVSNPPYI++ Sbjct: 149 SGQHFEIFGLDVIADAVKLAKTNAVRNHLTE-VQFLQSNWFEQVTGQFDLIVSNPPYIDA 207 Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237 +VR F+P +L G + + I + +L K G VE G+ Q V Sbjct: 208 EDQHLNQGDVR-FEPLTALVAEKKGYADLQYIIEQAPNYLKKQGFLLVEHGWQQGQKVRS 266 Query: 238 IFESRKLFLVNAFKDYGGNDRVLL 261 F + V DYGGN+R+ L Sbjct: 267 FFAEKLWKQVETINDYGGNERITL 290 >gi|126701108|ref|YP_001090005.1| protein methyltransferase [Clostridium difficile 630] gi|254977109|ref|ZP_05273581.1| protein methyltransferase [Clostridium difficile QCD-66c26] gi|255102694|ref|ZP_05331671.1| protein methyltransferase [Clostridium difficile QCD-63q42] gi|255308515|ref|ZP_05352686.1| protein methyltransferase [Clostridium difficile ATCC 43255] gi|255316189|ref|ZP_05357772.1| protein methyltransferase [Clostridium difficile QCD-76w55] gi|255518850|ref|ZP_05386526.1| protein methyltransferase [Clostridium difficile QCD-97b34] gi|255652029|ref|ZP_05398931.1| protein methyltransferase [Clostridium difficile QCD-37x79] gi|260685004|ref|YP_003216289.1| protein methyltransferase [Clostridium difficile CD196] gi|260688662|ref|YP_003219796.1| protein methyltransferase [Clostridium difficile R20291] gi|306521771|ref|ZP_07408118.1| protein methyltransferase [Clostridium difficile QCD-32g58] gi|115252545|emb|CAJ70388.1| Modification methylase HemK [Clostridium difficile] gi|260211167|emb|CBA66623.1| protein methyltransferase [Clostridium difficile CD196] gi|260214679|emb|CBE07316.1| protein methyltransferase [Clostridium difficile R20291] Length = 282 Score = 148 bits (373), Expect = 9e-34, Method: Compositional matrix adjust. Identities = 90/259 (34%), Positives = 141/259 (54%), Gaps = 7/259 (2%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L + G+ + ++ + L + Q+ L I I+ R+F + Sbjct: 24 DTELLLQKTLGVDRLYIHLNLNKELTEEQKTKFMGFAEERLNGRPIAYIVENREFMGLDF 83 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 + PRP+TE LV+ + EK+DV ILD+GTG+GA+ ++L K K + Sbjct: 84 FVKEGVLIPRPDTETLVEEIIEICR---EKKDV-SILDIGTGSGAITISLAKYIENSKIM 139 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG---LFDVIVSNPPYIESVIVDC 182 DIS ALEIAK NA+ N V E+ + SD F+++ FD+IVSNPPYI+ ++ Sbjct: 140 SFDISETALEIAKKNAIINEVGEKIKYINSDLFTAISDSNIKFDIIVSNPPYIKKQDIET 199 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 L +V+D++P +L+GG DGL YR I + ++LNK G+ + E+G+NQ DV+ I +S Sbjct: 200 LHKQVKDYEPYNALEGGEDGLDFYRRITEQGKKYLNKCGILAYEVGHNQAEDVINIMKSN 259 Query: 243 KLFLVNAFKDYGGNDRVLL 261 + KD G DRV++ Sbjct: 260 GYKKIYTKKDIQGIDRVVI 278 >gi|332161452|ref|YP_004298029.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|318605429|emb|CBY26927.1| methylase of polypeptide chain release factors [Yersinia enterocolitica subsp. palearctica Y11] gi|325665682|gb|ADZ42326.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Yersinia enterocolitica subsp. palearctica 105.5R(r)] Length = 284 Score = 148 bits (373), Expect = 9e-34, Method: Compositional matrix adjust. Identities = 97/257 (37%), Positives = 137/257 (53%), Gaps = 7/257 (2%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 RD+ L VTG + ++ +S L Q L R + E I ++G R+F+++ Sbjct: 22 RDAEILLSFVTGRARTYLLAFGESQLTAEQLAVLEPLAARREQGEPIAYLVGEREFWSLP 81 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L++SS T PRP+TE LV+ ALA LP RILDLGTGTGA+ LAL E P F Sbjct: 82 LSVSSATLIPRPDTECLVEQALAH-LPATP----CRILDLGTGTGAIALALASERPDFAV 136 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184 +GVDI A+ +A+ NA ++ D LQS WF SV G F +IVSNPPYI++ Sbjct: 137 MGVDIKADAVALARHNAKKLAIN-NVDFLQSSWFDSVSGRFTLIVSNPPYIDANDPHLNE 195 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 +VR ++P +L +G++ I +L G +E G+ Q V ++ + Sbjct: 196 GDVR-YEPHSALVAEAEGIADLAEIIRQSPAYLEVGGWLILEHGWQQATAVQKLLNNSGF 254 Query: 245 FLVNAFKDYGGNDRVLL 261 V +KDYG NDRV L Sbjct: 255 SAVMTYKDYGNNDRVTL 271 >gi|126736398|ref|ZP_01752140.1| modification methylase, HemK family protein [Roseobacter sp. CCS2] gi|126714219|gb|EBA11088.1| modification methylase, HemK family protein [Roseobacter sp. CCS2] Length = 288 Score = 148 bits (373), Expect = 9e-34, Method: Compositional matrix adjust. Identities = 88/258 (34%), Positives = 134/258 (51%), Gaps = 8/258 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A RD+ +G+++ ++ + ++D + I R + E + + G R FY Sbjct: 26 AARDARKLFAFASGVAAGRLTLILPEPVNDAVKTRFDALIARRSRFEPVSHLTGTRAFYG 85 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 ++ D +PRPETE L+++AL + R+LDLGTG+G + + LL E+P Sbjct: 86 RDFEVTKDVLDPRPETETLIEAAL--------RDPFARVLDLGTGSGCILVTLLAENPKA 137 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182 GVG D S AL +A NA +GV +R +QSDW ++++ FD+IV+NPPYI + + Sbjct: 138 VGVGGDASAVALTVALRNAQRHGVDDRATFVQSDWMAAIKRRFDLIVANPPYIAADEMAG 197 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 L +VR+++PR++L DGLS YRTI L G EIG Q V + Sbjct: 198 LSRDVREWEPRMALTDEADGLSAYRTIIKQAGDALIPGGRLMCEIGSTQGHAVAELMIRA 257 Query: 243 KLFLVNAFKDYGGNDRVL 260 L V D G DRV+ Sbjct: 258 GLRHVGVIPDLDGRDRVV 275 >gi|167855821|ref|ZP_02478573.1| HemK-like protein [Haemophilus parasuis 29755] gi|167853034|gb|EDS24296.1| HemK-like protein [Haemophilus parasuis 29755] Length = 416 Score = 148 bits (373), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 92/261 (35%), Positives = 144/261 (55%), Gaps = 4/261 (1%) Query: 1 MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60 + A D++ L VT S + ++ L++ + L + R K E + ILG ++F Sbjct: 151 LNAKADANILLQAVTKRSKSAIFAFAETELNESELRQLAELLARRAKGEPMAYILGEKEF 210 Query: 61 YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE-S 119 +++ L +S+ T PRP+TE LV+ AL ++ R++ ++ILDLGTGTGA+ LAL E Sbjct: 211 WSLPLAVSTATLIPRPDTERLVEVALEWAYKRLDSSKNLQILDLGTGTGAIALALASELG 270 Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESV 178 + +G+D A+++A+ N G E LQSDWF +++ FD+IVSNPPYI+ Sbjct: 271 TKAEIIGIDKQPDAVQLAEKNRQKLGF-ENVRFLQSDWFEALKNQRFDLIVSNPPYIDKD 329 Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238 + +VR F+P +L +GLS + I +L +G +E G+ Q V I Sbjct: 330 DENLTQGDVR-FEPLTALVAEQNGLSDLQKIIQNAPLYLTPNGALMLEHGWQQAASVQDI 388 Query: 239 FESRKLFLVNAFKDYGGNDRV 259 F+ + V F+DYGGNDRV Sbjct: 389 FQQNQWNAVTTFQDYGGNDRV 409 >gi|308271576|emb|CBX28184.1| Protein methyltransferase hemK [uncultured Desulfobacterium sp.] Length = 307 Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 92/255 (36%), Positives = 137/255 (53%), Gaps = 5/255 (1%) Query: 10 FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69 L G + + D L+ +R + I R + E + I+G ++F+++ L +S Sbjct: 47 LLAHTLGFKRIDLYLRHDQPLNVGERNLFKSLIRRRISKEPVAYIVGSKEFWSLELVVSK 106 Query: 70 DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129 D PRPETE LV+ AL L + + RIL+LGTG+GA+ LA+ ++P + DI Sbjct: 107 DVLIPRPETECLVEEAL-LVLDKDKVSAPKRILELGTGSGAIILAMATQNPDQQYFASDI 165 Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVIVDCLGLE 186 S AL +A +NA G+ E+ D W S ++ LFD+I+SNPPYI + L E Sbjct: 166 SINALAVALNNARHLGLDEKIDLFCGSWVSPLKENNNLFDIIISNPPYIRRGDIKTLQPE 225 Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246 + F+P +LDGG DGL+ + I + LNK G +EIGY+QK V I + + Sbjct: 226 INRFEPINALDGGEDGLACIKHIIKNAHKFLNKSGTLLLEIGYDQKKAVDEIIKETGRYA 285 Query: 247 VNAF-KDYGGNDRVL 260 +F KDY G DRV+ Sbjct: 286 QASFRKDYSGFDRVV 300 >gi|144897746|emb|CAM74610.1| modification methylase, HemK family [Magnetospirillum gryphiswaldense MSR-1] Length = 281 Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 91/260 (35%), Positives = 137/260 (52%), Gaps = 5/260 (1%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ + G+ +++ P+ VL +Q+ + R + I ILG R F+ + L Sbjct: 26 DARLLVAEALGVEPLRLVTHPEMVLTAQQQTAIEGMAARREDRQPISHILGRRGFWTLDL 85 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALLKESPFFKG 124 ++ DT +PRP+TE LV L R+ R +RI+D GTG+G + LALL E P G Sbjct: 86 RVTPDTLDPRPDTETLVQGVL----DRVADRHAALRIVDFGTGSGCILLALLAELPNAHG 141 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184 +G+D S AL +A NA NG++ R + DW ++G FD+IVSNPPYI + L Sbjct: 142 LGIDQSAAALAVAAENAERNGLAGRAEFRHGDWGRGLDGPFDIIVSNPPYIPEADIAGLE 201 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 EV +PR +L GG DGL YR +A ++R L G+ +E+G Q DV + ++ L Sbjct: 202 PEVARHEPRSALVGGADGLDCYRALAPDIARLLAVGGITGLEVGAGQDSDVAALLKAAGL 261 Query: 245 FLVNAFKDYGGNDRVLLFCR 264 + D G+ R + R Sbjct: 262 RDLCVADDLAGHGRSVFAAR 281 >gi|330863232|emb|CBX73358.1| protein methyltransferase hemK [Yersinia enterocolitica W22703] Length = 279 Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 97/257 (37%), Positives = 137/257 (53%), Gaps = 7/257 (2%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 RD+ L VTG + ++ +S L Q L R + E I ++G R+F+++ Sbjct: 17 RDAEILLSFVTGRARTYLLAFGESQLTAEQLAVLEPLAARREQGEPIAYLVGEREFWSLP 76 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L++SS T PRP+TE LV+ ALA LP RILDLGTGTGA+ LAL E P F Sbjct: 77 LSVSSATLIPRPDTECLVEQALAH-LPATP----CRILDLGTGTGAIALALASERPDFAV 131 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184 +GVDI A+ +A+ NA ++ D LQS WF SV G F +IVSNPPYI++ Sbjct: 132 MGVDIKADAVALARHNAKKLAIN-NVDFLQSSWFDSVSGRFTLIVSNPPYIDANDPHLNE 190 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 +VR ++P +L +G++ I +L G +E G+ Q V ++ + Sbjct: 191 GDVR-YEPHSALVAEAEGIADLAEIIRQSPAYLEVGGWLILEHGWQQATAVQKLLNNSGF 249 Query: 245 FLVNAFKDYGGNDRVLL 261 V +KDYG NDRV L Sbjct: 250 SAVMTYKDYGNNDRVTL 266 >gi|32033820|ref|ZP_00134105.1| COG2890: Methylase of polypeptide chain release factors [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|126209496|ref|YP_001054721.1| HemK-like protein [Actinobacillus pleuropneumoniae L20] gi|303251819|ref|ZP_07337990.1| HemK-like protein [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|307244798|ref|ZP_07526897.1| hypothetical protein appser1_120 [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307249119|ref|ZP_07531126.1| hypothetical protein appser2_20810 [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|307249195|ref|ZP_07531192.1| hypothetical protein appser4_120 [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|307253752|ref|ZP_07535606.1| hypothetical protein appser9_120 [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307258209|ref|ZP_07539952.1| hypothetical protein appser11_120 [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|307260447|ref|ZP_07542142.1| hypothetical protein appser12_230 [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|126098288|gb|ABN75116.1| HemK-like protein [Actinobacillus pleuropneumoniae serovar 5b str. L20] gi|302649249|gb|EFL79434.1| HemK-like protein [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|306854243|gb|EFM86449.1| hypothetical protein appser1_120 [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306854407|gb|EFM86603.1| hypothetical protein appser2_20810 [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|306858719|gb|EFM90778.1| hypothetical protein appser4_120 [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306863236|gb|EFM95176.1| hypothetical protein appser9_120 [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306867669|gb|EFM99514.1| hypothetical protein appser11_120 [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306869850|gb|EFN01632.1| hypothetical protein appser12_230 [Actinobacillus pleuropneumoniae serovar 12 str. 1096] Length = 290 Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 93/261 (35%), Positives = 146/261 (55%), Gaps = 4/261 (1%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D++ L VT + + ++ L + L + R L+ E + ILG ++F+++ L Sbjct: 29 DANLLLQAVTKRTKSAIFAFGETALHQTELAELAQLLARRLQGEPMAYILGEKEFWSLPL 88 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE-SPFFKG 124 +S T PRP+TE LV+ AL + R+E + ++ILDLGTGTGA+ LAL E + Sbjct: 89 KVSPHTLIPRPDTERLVEVALDWVYKRLESQQTLQILDLGTGTGAIALALASELGDKAQI 148 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183 +GVD +A+ +A++N G E LQSDWFS++E FD+IVSNPPYI+ + Sbjct: 149 IGVDFKPEAVTLAETNRQNLGF-ENVRFLQSDWFSALENRQFDLIVSNPPYIDKQDKNLQ 207 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 +VR F+P +L +GLS + I + +L +G +E G+ Q V +IF+ + Sbjct: 208 YGDVR-FEPLSALVAEQNGLSDLQKIIENAPLYLLDNGALMLEHGWQQAQAVQQIFKQYQ 266 Query: 244 LFLVNAFKDYGGNDRVLLFCR 264 + +F+DYGGNDR+ R Sbjct: 267 WDEIESFQDYGGNDRLTKAVR 287 >gi|298292695|ref|YP_003694634.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Starkeya novella DSM 506] gi|296929206|gb|ADH90015.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Starkeya novella DSM 506] Length = 283 Score = 147 bits (371), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 85/231 (36%), Positives = 128/231 (55%), Gaps = 3/231 (1%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 R++ + L GL+ ++ D + + L R E + R++G R+F+++ Sbjct: 25 REARALLKGGLGLADIDLVARADLPVAEEDAARLRALAARRADGEPLARLVGRREFWSLD 84 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 +L+ +T PRPETE LV++ALA R K +RILDLGTGTGA+ ALL E P G Sbjct: 85 FSLAPETLVPRPETETLVEAALALFPDRAAK---LRILDLGTGTGAILAALLSEYPNAVG 141 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184 +G+D+S A A+ N G++ R + W ++ FD++ SNPPYI + + L Sbjct: 142 LGIDLSEGAARQARDNLARLGLAGRSAVIVGRWAEAIHSRFDLVASNPPYIPARDIAALD 201 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235 EVR+ DPR++LDGG DGL YR +A + L G +E+G Q+ DV Sbjct: 202 KEVREHDPRLALDGGADGLDAYRVLAAALPGLLVPGGRAVLELGIGQEEDV 252 >gi|322513488|ref|ZP_08066598.1| protein methyltransferase HemK [Actinobacillus ureae ATCC 25976] gi|322120707|gb|EFX92591.1| protein methyltransferase HemK [Actinobacillus ureae ATCC 25976] Length = 290 Score = 147 bits (371), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 93/261 (35%), Positives = 146/261 (55%), Gaps = 4/261 (1%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D++ L VT S + ++ L + L + L+ E + ILG ++F+++ L Sbjct: 29 DANILLQAVTKRSKSAIFAFSETELSQTEMSQLETLLTCRLQGEPMAYILGEKEFWSLPL 88 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE-SPFFKG 124 +S T PRP+TE LV+ AL ++ R+E + ++ILDLGTGTGA+ LAL E + Sbjct: 89 KVSPHTLIPRPDTERLVEVALEWAYKRLEIQKTLQILDLGTGTGAIALALASELGDQAQI 148 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183 +GVD +A+ +A++N G + LQSDWFS++E F++IVSNPPYI+ + Sbjct: 149 IGVDFKPEAVVLAETNRQNLGF-QNVTFLQSDWFSALENQQFELIVSNPPYIDKQDENLK 207 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 +VR F+P +L DGLS + I R+L +G +E G+ Q V +IF+ + Sbjct: 208 YGDVR-FEPLSALVAEQDGLSDLQKIIKNAPRYLANNGALMLEHGWQQAQAVQQIFQQYQ 266 Query: 244 LFLVNAFKDYGGNDRVLLFCR 264 + +F+DYGGNDR+ R Sbjct: 267 WDEIASFQDYGGNDRMTKAVR 287 >gi|154252200|ref|YP_001413024.1| HemK family modification methylase [Parvibaculum lavamentivorans DS-1] gi|154156150|gb|ABS63367.1| modification methylase, HemK family [Parvibaculum lavamentivorans DS-1] Length = 283 Score = 147 bits (371), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 93/258 (36%), Positives = 143/258 (55%), Gaps = 4/258 (1%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ + VTG + ++I +P + + + L R L E + RILG R+F+ + Sbjct: 26 DARILVQAVTGATDIEMIREPAAPISAAEEEALAGFERRRLAREPVSRILGAREFWGLAF 85 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 ++S T +PRP++E L++++L P R +LDLGTGTG + L LL E P G+ Sbjct: 86 AVTSATLDPRPDSETLIEASLKCLAPLARPR----LLDLGTGTGCLLLTLLHERPDASGI 141 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185 GVDIS +AL++A+ N+ G++ R +W + FD+++SNPPYI S ++ L Sbjct: 142 GVDISEEALQVARENSARLGLAARARFQPGNWMEGLGEKFDLVISNPPYIASGEIEVLEP 201 Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245 EVR DPR++LDGG DGL YR IA + L ++G+ VE+G Q V IFE+ Sbjct: 202 EVRGHDPRLALDGGADGLDAYRAIAAALPDVLTQEGVAVVELGAGQADAVRGIFEAAGCA 261 Query: 246 LVNAFKDYGGNDRVLLFC 263 ++ D G R L+ Sbjct: 262 VLRVDPDLSGVPRALVAA 279 >gi|303250477|ref|ZP_07336674.1| HemK-like protein [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307251518|ref|ZP_07533425.1| hypothetical protein appser6_420 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|302650465|gb|EFL80624.1| HemK-like protein [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306860982|gb|EFM92988.1| hypothetical protein appser6_420 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] Length = 290 Score = 147 bits (371), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 93/261 (35%), Positives = 146/261 (55%), Gaps = 4/261 (1%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D++ L VT + + ++ L + L + R L+ E + ILG ++F+++ L Sbjct: 29 DANLLLQAVTKRTKSAIFAFGETALHQTELAELAQLLARRLQGEPMAYILGEKEFWSLPL 88 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE-SPFFKG 124 +S T PRP+TE LV+ AL + R+E + ++ILDLGTGTGA+ LAL E + Sbjct: 89 KVSPHTLIPRPDTERLVEVALDWVYKRLESQQTLQILDLGTGTGAIALALASELGDKAQI 148 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183 +GVD +A+ +A++N G E LQSDWFS++E FD+IVSNPPYI+ + Sbjct: 149 IGVDFKPEAVTLAETNRQNLGF-ENVRFLQSDWFSALENRQFDLIVSNPPYIDKQDKNLQ 207 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 +VR F+P +L +GLS + I + +L +G +E G+ Q V +IF+ + Sbjct: 208 YGDVR-FEPLSALVAEQNGLSDLQKIIENAPLYLLDNGALMLEHGWQQAQAVQQIFKQYQ 266 Query: 244 LFLVNAFKDYGGNDRVLLFCR 264 + +F+DYGGNDR+ R Sbjct: 267 WDEIESFQDYGGNDRLTKAVR 287 >gi|320102130|ref|YP_004177721.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Isosphaera pallida ATCC 43644] gi|319749412|gb|ADV61172.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Isosphaera pallida ATCC 43644] Length = 319 Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 83/257 (32%), Positives = 144/257 (56%), Gaps = 3/257 (1%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 ++ L V + +Q+ + D V+ D R + + R + E ++G ++FY + Sbjct: 56 EAEVLLAHVLDHARYQLYMHIDDVVSDAARSAFRDLVKRRSEGEPSAYLVGRKEFYALSF 115 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 ++ PRP++E LV AL +L ++ R+ R+ D+GTG+G + +A+ + SP + V Sbjct: 116 KVTPAVLIPRPDSEFLVIEALE-ALGKMVGRETPRLADVGTGSGCLAVAVARRSPQVRIV 174 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVDCL 183 +D S +AL +A+ NA +GV++R D + D F + E FD+IVSNPPY+ + + + L Sbjct: 175 AIDRSAEALAVARENAQAHGVADRIDFCEGDLFEPLDPEDRFDLIVSNPPYVATPVWETL 234 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 +++F+PR++LDGGIDGL R + D + L+ G ++EIG +Q V R+F Sbjct: 235 EPTIKNFEPRLALDGGIDGLDVIRRLVDQAAVRLHPGGTLAMEIGSDQGEAVTRLFAGDL 294 Query: 244 LFLVNAFKDYGGNDRVL 260 +D+ G DRV+ Sbjct: 295 WSPPTIRRDHAGLDRVV 311 >gi|291520550|emb|CBK75771.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Butyrivibrio fibrisolvens 16/4] Length = 276 Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 89/260 (34%), Positives = 137/260 (52%), Gaps = 7/260 (2%) Query: 1 MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60 + A D+ L V+G++ Q + + + + ++R H + I G +DF Sbjct: 20 LDAKIDAWLLLSFVSGITKAQYFLKQSEEIPENTLYKYKEVLLRRASHVPLQHITGEQDF 79 Query: 61 YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120 + ++ PR +TE LV+ AL +P +LDL TG+G V ++L+ Sbjct: 80 MGLTFWVNEHVLIPRQDTETLVEEALKV-IPSGS-----HVLDLCTGSGCVIISLVALGQ 133 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180 G+GVDIS AL +A+ N T V ++ + D F+ V+G F+ IVSNPPYI + +V Sbjct: 134 GLSGIGVDISEDALVVARENG-TRIVGKKVAFEKGDLFTGVQGRFNAIVSNPPYIPTAVV 192 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 + L +EV+D +PR++LDG DGL YR I +LN+ G VEIGY+Q DV ++F Sbjct: 193 EGLAVEVKDHEPRLALDGTEDGLLFYRRITASAQDYLNEGGWLLVEIGYDQGQDVSKLFT 252 Query: 241 SRKLFLVNAFKDYGGNDRVL 260 V +D GNDRV+ Sbjct: 253 DAGFKDVEVVQDLAGNDRVV 272 >gi|310816144|ref|YP_003964108.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Ketogulonicigenium vulgare Y25] gi|308754879|gb|ADO42808.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Ketogulonicigenium vulgare Y25] Length = 276 Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 95/263 (36%), Positives = 139/263 (52%), Gaps = 10/263 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQV-IVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 A RD+ L G++ ++ +V PD V++ Q AI + K + + +I+G R FY Sbjct: 23 AARDARLLLAHALGVAPDRLTLVLPD-VVNAAQADAFHAAIAQRAKRQPVAQIIGQRMFY 81 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 ++ DT +PRPETE+L+ +ALA + R+LD+GTGTG + L LL E+ Sbjct: 82 GRNFLVTPDTLDPRPETEVLIAAALA--------QPFTRVLDIGTGTGCILLTLLAENQQ 133 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181 G GVD+S AL++A+ NAV G+ R + SDW + G FD+IVSNPPYI + Sbjct: 134 AVGQGVDLSPAALDVAQRNAVALGLDTRAEFSLSDWGMAATGRFDLIVSNPPYIALDEMA 193 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 L EV ++P ++L G DGL+ YR I R L+ G VE G Q + I ++ Sbjct: 194 GLSPEVTGWEPAMALTDGGDGLAAYRAILADAPRLLSDAGRVIVEFGPTQADAIRAIGDA 253 Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264 D G DR L+F + Sbjct: 254 AGFTSAQLHHDLDGRDRCLVFSQ 276 >gi|332306090|ref|YP_004433941.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Glaciecola agarilytica 4H-3-7+YE-5] gi|332173419|gb|AEE22673.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Glaciecola agarilytica 4H-3-7+YE-5] Length = 287 Score = 146 bits (369), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 93/263 (35%), Positives = 136/263 (51%), Gaps = 10/263 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A DS +C+V ++ ++ P+ LD Q + + + + + +LG+RDF++ Sbjct: 30 AATDSRLLMCQVLQCNTVYLMTWPEKPLDAAQLRAFEHLVEKRKQGHPVAYLLGYRDFWS 89 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 +RL +S T PRPETELLV++AL L + +LDLGTGTGA+ LAL E P + Sbjct: 90 LRLQVSPATLIPRPETELLVETALDLPL-----NNEANVLDLGTGTGAIALALASEKPDW 144 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIV 180 + G+D + A+ +AK N N + RF QSDWFS++ FD+IVSNPPY+E V Sbjct: 145 QVAGIDKNADAVALAKQNGQANKLPHVRFT--QSDWFSNLSAASFDLIVSNPPYVEQSSV 202 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 +VR F+P +L G DGL R I +L + E G+ Q V + Sbjct: 203 YLQQGDVR-FEPASALTSGEDGLDDIRFIIPNAIEYLAPNAWLVFEHGHLQAQGVQALLR 261 Query: 241 SRKLFLVNAFKDYGGNDRVLLFC 263 V + D G+ RV L C Sbjct: 262 ENSFEQVRSVSDLNGHPRVTLGC 284 >gi|300716407|ref|YP_003741210.1| protein methyltransferase [Erwinia billingiae Eb661] gi|299062243|emb|CAX59360.1| Protein methyltransferase [Erwinia billingiae Eb661] Length = 276 Score = 146 bits (369), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 100/257 (38%), Positives = 138/257 (53%), Gaps = 10/257 (3%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 RD+ L VTG S +I DS L Q L + + R E + + G R+F+++ Sbjct: 22 RDAEILLGFVTGKSRSWIIAFDDSELSAEQLSQLDDLLARRANGEPVAYLTGQREFWSLS 81 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L++S DT PRP+TELLV+ ALA LP +LDLGTGTGA+ LA+ E P + Sbjct: 82 LSVSPDTLIPRPDTELLVEQALAH-LPETAS----TVLDLGTGTGAIALAIASERPDCQV 136 Query: 125 VGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDC 182 GVD A+ +A+SNA G++ RF S+WFS+V G F +IVSNPPYI++ Sbjct: 137 TGVDRIAAAVSLAESNAQRLGITNARFRL--SNWFSAVSGEQFTLIVSNPPYIDAEDQHL 194 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 +VR F+P +L +GL+ + IA +L G +E G+ Q V I + Sbjct: 195 QQGDVR-FEPDSALIAADNGLADIKQIAAEAGHYLLPGGWLLLEHGWQQAEAVRAILQQN 253 Query: 243 KLFLVNAFKDYGGNDRV 259 V KDYGGNDRV Sbjct: 254 HFVSVATAKDYGGNDRV 270 >gi|315634082|ref|ZP_07889371.1| protein methyltransferase HemK [Aggregatibacter segnis ATCC 33393] gi|315477332|gb|EFU68075.1| protein methyltransferase HemK [Aggregatibacter segnis ATCC 33393] Length = 299 Score = 146 bits (368), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 95/270 (35%), Positives = 142/270 (52%), Gaps = 15/270 (5%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L VT S ++ ++ LD++ + LT + R L+ E I +LG ++F+++ L Sbjct: 26 DAQVLLQFVTQKSRAFILAFGETALDEKTQEKLTALLSRRLQGEPIAYLLGEKEFWSLPL 85 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEK----RDVVRILDLGTGTGAVCLALLKE-SP 120 +S+ T PRP+TE+LV+ A+A S ++K RILDLGTGTGA+ LAL E P Sbjct: 86 NVSAGTLIPRPDTEILVEKAVAISAEALQKCGQNSQCFRILDLGTGTGAIALALASELKP 145 Query: 121 FFKG-------VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173 + +GVD+ + +A SNA N + F LQS WF + G FD+IVSNPP Sbjct: 146 IAQKQQIQLEVIGVDVMPNVVALATSNAEKNQLGVSF--LQSHWFDKMTGTFDLIVSNPP 203 Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233 YI++ +VR F+P +L +G + R I + + G VE G+ Q Sbjct: 204 YIDAKDEHLTQGDVR-FEPLSALVAEEEGYADLRHIIANAPKFMRTGGYLLVEHGWQQGE 262 Query: 234 DVVRIFESRKLFLVNAFKDYGGNDRVLLFC 263 V IF+ + +DYG N+RV L C Sbjct: 263 KVRSIFQENFWTSIETLRDYGNNERVTLGC 292 >gi|253997607|ref|YP_003049671.1| HemK family modification methylase [Methylotenera mobilis JLW8] gi|253984286|gb|ACT49144.1| modification methylase, HemK family [Methylotenera mobilis JLW8] Length = 292 Score = 146 bits (368), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 99/245 (40%), Positives = 131/245 (53%), Gaps = 14/245 (5%) Query: 17 LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRP 76 L +H+ V P SV D + + R L E + ILG+R+FY + L +S DT PRP Sbjct: 46 LLAHEQDVLPASVSADFETL-----LTRRLAGEPVAYILGYREFYGLNLKVSPDTLIPRP 100 Query: 77 ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136 +TE LV++ALA +I ILDLGTGTGAV LA+ + P + VD S AL I Sbjct: 101 DTETLVEAALA----KIPTDTDYTILDLGTGTGAVALAIAQHRPHTQVTAVDASQGALHI 156 Query: 137 AKSNAVTNGVSE-RFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194 A+ NA G+++ RF S WFS+VE F++I+SNPPYIE ++R F+P Sbjct: 157 AEHNAQQLGLTQVRFSL--SHWFSAVESERFNLIISNPPYIEQHDPHLGQGDLR-FEPIS 213 Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYG 254 +L G+DGL R I HL G +E GYNQ V + L + KD G Sbjct: 214 ALASGVDGLDDIREIIAHSLIHLQPQGWLMLEHGYNQAHLVADLMAESGLVDIETIKDLG 273 Query: 255 GNDRV 259 NDRV Sbjct: 274 ANDRV 278 >gi|261496508|ref|ZP_05992888.1| protein-glutamine N-methyltransferase [Mannheimia haemolytica serotype A2 str. OVINE] gi|261307711|gb|EEY09034.1| protein-glutamine N-methyltransferase [Mannheimia haemolytica serotype A2 str. OVINE] Length = 363 Score = 146 bits (368), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 93/256 (36%), Positives = 142/256 (55%), Gaps = 4/256 (1%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D++ L VT S + ++VL +R+ L + R K E + ILG+R+F+++ L Sbjct: 104 DANLLLQAVTKRSKSAIFAFSETVLSERELVELAEKLARRAKGEPMAYILGYREFWSLPL 163 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE-SPFFKG 124 +S T PRP+TE LV+ AL ++ R+E + +++ILDLGTGTGA+ LAL E + Sbjct: 164 KVSPATLIPRPDTERLVELALEYANKRLENQKMLQILDLGTGTGAIALALASELGEKAQI 223 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183 +GVD +A+++A+ N G+++ LQSDWFSS+ FD+IVSNPPYI+ + Sbjct: 224 IGVDFQNEAVQLAEENRQHLGLNQ-VTFLQSDWFSSLANQQFDLIVSNPPYIDEADENLT 282 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 +VR F+P +L GLS + I +L G +E + Q V +F+ Sbjct: 283 VGDVR-FEPLTALVADNKGLSDLQKIIQNAPLYLKPQGALMLEHSWQQGNAVRDLFDLNL 341 Query: 244 LFLVNAFKDYGGNDRV 259 V +DY GNDRV Sbjct: 342 WEQVETAQDYAGNDRV 357 >gi|261493249|ref|ZP_05989776.1| protein-glutamine N-methyltransferase [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261311099|gb|EEY12275.1| protein-glutamine N-methyltransferase [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 417 Score = 146 bits (368), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 94/261 (36%), Positives = 144/261 (55%), Gaps = 4/261 (1%) Query: 1 MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60 + A D++ L VT S + ++VL +R+ L + R K E + ILG+R+F Sbjct: 153 LNAKFDANLLLQAVTKRSKSAIFAFSETVLSERELVELAEKLARRAKGEPMAYILGYREF 212 Query: 61 YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE-S 119 +++ L +S T PRP+TE LV+ AL ++ R+E + +++ILDLGTGTGA+ LAL E Sbjct: 213 WSLPLKVSPATLIPRPDTERLVELALEYANKRLENQKMLQILDLGTGTGAIALALASELG 272 Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESV 178 + +GVD +A+++A+ N G+++ LQSDWFSS+ FD+IVSNPPYI+ Sbjct: 273 EKAQIIGVDFQNEAVQLAEENRQHLGLNQ-VTFLQSDWFSSLANQQFDLIVSNPPYIDEA 331 Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238 + +VR F+P +L GLS + I +L G +E + Q V + Sbjct: 332 DENLTVGDVR-FEPLTALVADNKGLSDLQKIIQNAPLYLKPQGALMLEHSWQQGNAVRDL 390 Query: 239 FESRKLFLVNAFKDYGGNDRV 259 F+ V +DY GNDRV Sbjct: 391 FDLNLWEQVETAQDYAGNDRV 411 >gi|210623299|ref|ZP_03293716.1| hypothetical protein CLOHIR_01666 [Clostridium hiranonis DSM 13275] gi|210153700|gb|EEA84706.1| hypothetical protein CLOHIR_01666 [Clostridium hiranonis DSM 13275] Length = 293 Score = 145 bits (367), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 85/220 (38%), Positives = 131/220 (59%), Gaps = 8/220 (3%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL-AFSLPRIEKRDVVRILDLGTGTG 109 I I+G R+F + + PRP+TE LVD + +S +++D + ILD+GTG+G Sbjct: 75 IAYIVGNREFMGLDFYVQEGVLIPRPDTETLVDEIIRIYSEEEYKQKDRIDILDIGTGSG 134 Query: 110 A--VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG---L 164 A V LA ++ F K DIS ALEI NA TN V +R + ++SD FS++EG + Sbjct: 135 AITVSLAYYIKNSFVKSF--DISDIALEIGAKNAATNSVEDRTEFIKSDVFSALEGEGEI 192 Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224 D+IVSNPPYI ++ L +V+D++P +L+GG DGL YR+I +G ++L K G+ + Sbjct: 193 LDIIVSNPPYIRKDVIPTLHTQVKDYEPYNALEGGEDGLDFYRSITEGSVKYLKKGGILA 252 Query: 225 VEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 E+G++Q DV I ++ + KD G DRV++ + Sbjct: 253 YEVGHDQAEDVSNIMKNCGYEKIYTKKDLPGIDRVVIGTK 292 >gi|158426117|ref|YP_001527409.1| modification methylase [Azorhizobium caulinodans ORS 571] gi|158333006|dbj|BAF90491.1| modification methylase [Azorhizobium caulinodans ORS 571] Length = 287 Score = 145 bits (367), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 86/220 (39%), Positives = 128/220 (58%), Gaps = 4/220 (1%) Query: 46 LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLG 105 L + R++G ++F+++ +LS +T PRP+TE +V++AL + ++ + ILDLG Sbjct: 70 LSGVPVARLVGEKEFWSLSFSLSPETLVPRPDTETVVEAAL---MTVTDRTAPLHILDLG 126 Query: 106 TGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF 165 TG+GA+ ALL E P G+GVD S A A+ N G+ R + DW S++ G F Sbjct: 127 TGSGAILAALLVELPAAVGIGVDQSEGAARTARDNLARAGLQGRGTVIVGDWASALGGGF 186 Query: 166 DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225 D++VSNPPYI S+ + L +EVR+ DP +LDGG DGLS YR IA R L G + Sbjct: 187 DLVVSNPPYIPSIDIVGLAIEVRENDPLAALDGGADGLSSYRIIAAEAPRLLKAGGHLVL 246 Query: 226 EIGYNQKVDVVRIFESRKLFLVN-AFKDYGGNDRVLLFCR 264 E+G Q+ +V + + L + A +D GG R L+ R Sbjct: 247 ELGIGQEAEVAALAGAAGLAITGPARRDLGGIPRALVARR 286 >gi|307296978|ref|ZP_07576794.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Sphingobium chlorophenolicum L-1] gi|306877504|gb|EFN08732.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Sphingobium chlorophenolicum L-1] Length = 289 Score = 145 bits (367), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 86/223 (38%), Positives = 124/223 (55%), Gaps = 14/223 (6%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101 + R L E I I G RDF+ + L ++ D PRP++E L+++AL R RI Sbjct: 71 LQRRLTGEPIAYITGTRDFWTISLHVTPDVLIPRPDSETLIEAALDH----FGARSPARI 126 Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 LDLGTG+GA+ LA L + P +G GVDIS AL +A+ NA G ER +W + Sbjct: 127 LDLGTGSGALLLAALSQWPQARGTGVDISPAALAVAQDNADRLGFGERAAFRLGNWAEGI 186 Query: 162 EGLFDVIVSNPPYIE---SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 EG FD+I+ NPPYI ++ D L +P +L G DGL YR IA + R L Sbjct: 187 EGPFDLILINPPYIARDVALAGDVL------HEPESALFAGADGLDDYRRIAPTLPRLLA 240 Query: 219 KDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 DG+ ++EIGY+Q++ V + + L V + +D G++R L+ Sbjct: 241 PDGMAAIEIGYDQRLSVSALLADQGLS-VASRRDLAGHERCLM 282 >gi|260589192|ref|ZP_05855105.1| protein-(glutamine-N5) methyltransferase [Blautia hansenii DSM 20583] gi|331082608|ref|ZP_08331731.1| protein-(glutamine-N5) methyltransferase [Lachnospiraceae bacterium 6_1_63FAA] gi|260540273|gb|EEX20842.1| protein-(glutamine-N5) methyltransferase [Blautia hansenii DSM 20583] gi|330400227|gb|EGG79869.1| protein-(glutamine-N5) methyltransferase [Lachnospiraceae bacterium 6_1_63FAA] Length = 285 Score = 145 bits (367), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 86/255 (33%), Positives = 140/255 (54%), Gaps = 6/255 (2%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L V+G+S V D + + I + KH + ++ FY ++ Sbjct: 26 DAWLLLEYVSGISRSWYFVHEDEEISENDIEEYQILIEQRGKHIPLQQLTKEAYFYGMKF 85 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 ++ + PR +TE+LV+ L+ S ++++ +++LD+ TG+G + LALL G Sbjct: 86 FVNENVLIPRQDTEVLVEQVLSLS----KEKENLKLLDMCTGSGCILLALLANLKQASGT 141 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185 GVD+S KALE+A+ N+ G+ + +QSD F V G +D+IVSNPPYIE+ +++ L Sbjct: 142 GVDLSEKALEVAQRNSKELGIEVSW--VQSDLFDKVSGSYDIIVSNPPYIETSVIEGLMD 199 Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245 EV+ ++PR++LDG DGL YR I ++L +G+ + EIGYNQ V + Sbjct: 200 EVKLYEPRMALDGTEDGLFFYREITMQAGKYLKNNGILAFEIGYNQGKAVSEFMKENGYK 259 Query: 246 LVNAFKDYGGNDRVL 260 V +D G DRV+ Sbjct: 260 EVQVLQDLAGLDRVV 274 >gi|154502574|ref|ZP_02039634.1| hypothetical protein RUMGNA_00387 [Ruminococcus gnavus ATCC 29149] gi|153796766|gb|EDN79186.1| hypothetical protein RUMGNA_00387 [Ruminococcus gnavus ATCC 29149] Length = 283 Score = 145 bits (366), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 89/258 (34%), Positives = 142/258 (55%), Gaps = 6/258 (2%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L VTG++ ++P+ + D++ I + + + G ++F + Sbjct: 25 DAWYLLEHVTGITKASYYMEPEHPMHDQEEREYLELIRKRSTRIPLQHLTGVQEFMGLEF 84 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE-SP-FFK 123 ++ PR +TE+LV++AL + + E+ +R+LD+ TG+G + L+LL E P Sbjct: 85 LVNEHVLIPRQDTEVLVETAL--DVCKQEQMGEIRLLDMCTGSGCILLSLLHELKPRTVT 142 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183 GVGVD+S +AL +A+ NA + F L+SD F +V+G +DV+VSNPPYI + +++ L Sbjct: 143 GVGVDLSKEALCVAEKNAEKLKIDAEF--LESDLFENVKGTYDVVVSNPPYIRTSVIETL 200 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 EV+D DP ++LDG DGL YR I + +L K G EIG +Q DV + E Sbjct: 201 QEEVKDHDPYLALDGKEDGLYFYRRIIEQAPAYLKKKGWLLFEIGSDQGEDVKNLMEQAG 260 Query: 244 LFLVNAFKDYGGNDRVLL 261 V+ KD G DRV+ Sbjct: 261 YTGVSVKKDLAGLDRVVF 278 >gi|225874212|ref|YP_002755671.1| ribosomal protein L11 methyltransferase [Acidobacterium capsulatum ATCC 51196] gi|225794369|gb|ACO34459.1| ribosomal protein L11 methyltransferase [Acidobacterium capsulatum ATCC 51196] Length = 294 Score = 145 bits (365), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 85/238 (35%), Positives = 130/238 (54%), Gaps = 7/238 (2%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A RD+ L V G + +IV D + Q + I+R E + I+G ++F+ Sbjct: 36 ARRDAELLLQHVLGRNRAWLIVHSDDAMTAEQVTQFESWILRRAAQEPVQYIVGEQEFWG 95 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 +RL ++ D PRPETE LV++AL R+ + + VR+ D+GTG+GA+ +AL P Sbjct: 96 LRLRVTPDVLIPRPETEHLVEAALE----RLPEGETVRVADIGTGSGAIAIALAASRPQA 151 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181 +D+S AL IA+ NA +GV+ER LQSD ++V G F +IVSNPPY+ + Sbjct: 152 LVTALDLSEAALRIARENAAAHGVAERMRFLQSDLLAAVRGERFAMIVSNPPYVPG--GE 209 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 L +VRDF+P +L G +GL YR + + L G +EIG+ Q+ + + Sbjct: 210 ELEPQVRDFEPHSALFAGAEGLDVYRRLIPEAAEVLEPGGWLLMEIGHGQRAALAELL 267 >gi|158520490|ref|YP_001528360.1| HemK family modification methylase [Desulfococcus oleovorans Hxd3] gi|158509316|gb|ABW66283.1| modification methylase, HemK family [Desulfococcus oleovorans Hxd3] Length = 297 Score = 145 bits (365), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 94/261 (36%), Positives = 135/261 (51%), Gaps = 7/261 (2%) Query: 10 FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69 L V G+ + + D L + + I R E + ILG + F+++ L ++ Sbjct: 36 LLAHVLGIKRLDLYLRYDQPLTPDELAAFRSLISRRKAGEPVAYILGEKAFWSMDLVVTP 95 Query: 70 DTFEPRPETELLVDSALAF-SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128 D PRP+TE LV++AL+F + P + +L+ TG+GAV LAL K P + D Sbjct: 96 DVLIPRPDTECLVETALSFLAGPGSDTPAERWVLEPATGSGAVVLALAKSHPGCRFFAFD 155 Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFS----SVEGLFDVIVSNPPYIESVIVDCLG 184 S AL +A+ NAV + R SDWFS S G FD+IV+NPPY+ S +D L Sbjct: 156 RSTAALAVARKNAVRYDPAHRVVFFASDWFSALGNSASGRFDMIVANPPYVASGDIDHLA 215 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 E+ F+PR++LDGG DGL R I R L G +EIG++QK V ++ E L Sbjct: 216 PEI-GFEPRMALDGGADGLDPVRHILQAAGRFLKPGGRLLIEIGWDQKERVAQVTEQAGL 274 Query: 245 FLVNAF-KDYGGNDRVLLFCR 264 + F KD G+ RV+ R Sbjct: 275 YTAVGFAKDLAGHHRVVHMQR 295 >gi|297182759|gb|ADI18913.1| methylase of polypeptide chain release factors [uncultured SAR11 cluster bacterium HF0010_09O16] Length = 279 Score = 145 bits (365), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 77/261 (29%), Positives = 143/261 (54%), Gaps = 5/261 (1%) Query: 1 MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60 + A DS + + + +I++ + R + N I + I +I+ +DF Sbjct: 20 ISAKLDSEILMSQAIRKNKKFIILNLHKEIKKRDLEYFDNLIQERAGRKPIAQIVKKKDF 79 Query: 61 YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120 + ++++ PRP+TE L++ L ++ ++ ++ILD+G G+G + +++LKE Sbjct: 80 WKYEFIVNNNVLIPRPDTETLIEQTLKL----VKNKNRLQILDIGIGSGCILMSILKEKK 135 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180 F G G+DIS K+L+I+K N ++ R +S+ + G +D+IVSNPPYI+ I+ Sbjct: 136 NFIGTGIDISSKSLQISKVNGQKLRINNRLRLFKSNIDNFNTGKYDLIVSNPPYIKKSIL 195 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 CL ++ F+P+ +LDGG+DGLS R + + S + + G +EIG++QK V +I Sbjct: 196 KCLEKDI-GFEPKQALDGGLDGLSEIRKVINKSSELIKRSGHLIIEIGFDQKNKVKKILR 254 Query: 241 SRKLFLVNAFKDYGGNDRVLL 261 + ++ KD +DR ++ Sbjct: 255 DKGFYIKKTVKDLSNHDRCIV 275 >gi|254461332|ref|ZP_05074748.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Rhodobacterales bacterium HTCC2083] gi|206677921|gb|EDZ42408.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Rhodobacteraceae bacterium HTCC2083] Length = 278 Score = 144 bits (364), Expect = 9e-33, Method: Compositional matrix adjust. Identities = 88/257 (34%), Positives = 137/257 (53%), Gaps = 7/257 (2%) Query: 4 LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63 +RD V+ + + ++ + + ++QR + R + + I +I+ R F+ Sbjct: 23 MRDLRILAAHVSQVDASRMTLHMHDEVTEKQREHFKLLVNRRMSNMPISKIIQKRLFWGR 82 Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 + + +PR +TE L+ + L ++ +D ++LDLGTG+GA+ L L E P Sbjct: 83 EFEVDLNVLDPRGDTETLIAACL-----KLGPQD--KVLDLGTGSGAIGLTLTAEWPLAD 135 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183 + DIS +AL++A+ N + V++ L+SDWF +VEG FD+IVSNPPYI D L Sbjct: 136 VMCTDISDEALDVARLNMKSFDVADGVRLLRSDWFEAVEGRFDLIVSNPPYIALEEWDGL 195 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 EVR FDPR++L DGLS YR I +L KDG VEIG+ Q DV ++ + Sbjct: 196 DFEVRGFDPRMALTDEADGLSCYRVIVAQAGAYLEKDGHLMVEIGHAQGRDVQDLYAAAG 255 Query: 244 LFLVNAFKDYGGNDRVL 260 + D G DRV+ Sbjct: 256 FTQITCLPDLAGRDRVV 272 >gi|88861345|ref|ZP_01135975.1| N5-glutamine methyltransferase, modifies release factors RF-1 and RF-2 [Pseudoalteromonas tunicata D2] gi|88816611|gb|EAR26436.1| N5-glutamine methyltransferase, modifies release factors RF-1 and RF-2 [Pseudoalteromonas tunicata D2] Length = 281 Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 95/258 (36%), Positives = 135/258 (52%), Gaps = 10/258 (3%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L V G S + PD L +Q+ A+ R L E I I+G+R+F++++L Sbjct: 27 DAQVLLLDVIGQSRSYLFTWPDKALTAQQQTQFEQAVARRLAGEPIAHIIGYREFWSLKL 86 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 +S T PRP+TE LV+ AL+ +LP + ++LDLGTGTGA+ LAL E ++ Sbjct: 87 KVSPATLIPRPDTETLVEHALSLALP-----EHAKVLDLGTGTGAIALALASEQFNWQVT 141 Query: 126 GVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183 G D A+ +A++N + RF +QS+WFS+ FD+IVSNPPYIE Sbjct: 142 GCDRIEDAVVLAQTNQAALEIKNCRF--VQSNWFSAFSTEQFDLIVSNPPYIEQDDPHLS 199 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 +VR F+P +L +GL+ RTI + L G +E GY Q V IF Sbjct: 200 QGDVR-FEPLSALVAPDNGLADIRTIVNQARTFLTSGGYLLLEHGYQQAEQVSAIFLQMA 258 Query: 244 LFLVNAFKDYGGNDRVLL 261 + KD GNDRV L Sbjct: 259 YKDIRTIKDLAGNDRVTL 276 >gi|210608517|ref|ZP_03287893.1| hypothetical protein CLONEX_00072 [Clostridium nexile DSM 1787] gi|210153008|gb|EEA84014.1| hypothetical protein CLONEX_00072 [Clostridium nexile DSM 1787] Length = 287 Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 86/256 (33%), Positives = 135/256 (52%), Gaps = 8/256 (3%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L VTGL + PD + D Q + + +H + I G ++F + Sbjct: 25 DAWYLLEFVTGLDRTAYFLKPDEKITDEQGSLYKAYLEQRAQHIPLQHITGVQEFMGLEF 84 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 ++ PR +TE LV+ L++ P++ ++LD+ TG+G + ++L+K +GV Sbjct: 85 AVNEHVLVPRQDTETLVECVLSYVQPQM------KVLDMCTGSGCILISLMKLGKIAQGV 138 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185 G DIS +AL+ AK NA + V ++SD F ++ +DVIVSNPPYI + +++ L Sbjct: 139 GADISDEALKTAKKNAEKHQVEPLL--IKSDLFENIVDKYDVIVSNPPYIRTAVIEELKE 196 Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245 EVR DP ++LDG DGL YR + + +L K G+ EIG++Q DV + E Sbjct: 197 EVRCHDPILALDGKEDGLYFYRKLIEQSPMYLKKGGMLYFEIGHDQGQDVKCLMEKAGFE 256 Query: 246 LVNAFKDYGGNDRVLL 261 V KD G DRV+ Sbjct: 257 DVMVKKDLAGLDRVVF 272 >gi|150388170|ref|YP_001318219.1| HemK family modification methylase [Alkaliphilus metalliredigens QYMF] gi|149948032|gb|ABR46560.1| modification methylase, HemK family [Alkaliphilus metalliredigens QYMF] Length = 293 Score = 144 bits (363), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 82/261 (31%), Positives = 135/261 (51%), Gaps = 6/261 (2%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ LC + Q+ + P+ +D+ + I + K + I+G ++F + Sbjct: 26 DAEVILCHLLKTERIQLHIYPERKVDEEVQEQFWEGIQKRKKRMPVQYIVGTQEFMGLDF 85 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 + S PR +TE+LV+S L + V ++D+GTG+GA+ ++L + K Sbjct: 86 RVESGVLIPRADTEILVESVLGLYEVHY-NNEAVALMDIGTGSGAIAISLARFIERSKIY 144 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-----EGLFDVIVSNPPYIESVIV 180 +D+S KALEIA++N TN V + F + EG F ++SNPPYI +V Sbjct: 145 AIDLSEKALEIAENNGRTNEVQHKISFFYGSLFEPLKGYDLEGTFQFVISNPPYIPPDVV 204 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 + L +V+D++PR++L+GG DGL YR I + ++L G EIGY+Q V + E Sbjct: 205 EELSPQVKDYEPRMALEGGADGLDFYREIVEKAPQYLQMKGWLCFEIGYDQGEQVKGLME 264 Query: 241 SRKLFLVNAFKDYGGNDRVLL 261 +R V +D G DRV++ Sbjct: 265 TRGFSRVEVIRDLAGLDRVVI 285 >gi|332558341|ref|ZP_08412663.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Rhodobacter sphaeroides WS8N] gi|332276053|gb|EGJ21368.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Rhodobacter sphaeroides WS8N] Length = 278 Score = 144 bits (363), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 90/259 (34%), Positives = 131/259 (50%), Gaps = 8/259 (3%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 +A RD+ L + ++ + L A+ + + +I+G R F+ Sbjct: 21 EAARDARRLLAHAMAIDPARLTLHLPDPLPPEAAARFEAALAARAARQPVGQIVGERLFW 80 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 R ++ DT +PRPETE L+D+ALA +LDLGTGTG + + LL E P Sbjct: 81 GRRFRVTRDTLDPRPETEGLIDAALAEPF--------ATVLDLGTGTGCIAVTLLAERPA 132 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181 G+ D+S AL +A NA GV+ R + SDWF++V D+I+SNPPYI + + Sbjct: 133 AHGIATDLSPAALAVAAENAAALGVAPRLELRLSDWFAAVPERVDLILSNPPYIAADEMA 192 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 L EVR ++P ++L G DGL YR IA G HL G +EIG Q V + E+ Sbjct: 193 ALAPEVRLWEPHLALSPGGDGLDAYRAIARGAPAHLRPGGRLLLEIGAAQGRAVAGLVEA 252 Query: 242 RKLFLVNAFKDYGGNDRVL 260 L V+ D G DR++ Sbjct: 253 AGLARVSVLPDLDGRDRLV 271 >gi|254450152|ref|ZP_05063589.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Octadecabacter antarcticus 238] gi|198264558|gb|EDY88828.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Octadecabacter antarcticus 238] Length = 268 Score = 144 bits (363), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 88/235 (37%), Positives = 127/235 (54%), Gaps = 10/235 (4%) Query: 27 DSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL 86 D D + F + R+ + H +LG+RDFY R ++ D +PR +TE L+++AL Sbjct: 39 DEFEDAPEAAFFADIGQRAARTPVSH-LLGYRDFYGRRFQVTPDVLDPRGDTETLIEAAL 97 Query: 87 AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146 A +LDLGTG+G + + LL E G+GVD+S +A+ +A+ NA+ GV Sbjct: 98 AVPF--------ADVLDLGTGSGCILVTLLAERGAVTGIGVDVSPRAVTVAEQNALRLGV 149 Query: 147 SERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206 +R SDWF V FD+IVSNPPYI + L E+ ++PR++L DGL+ Y Sbjct: 150 QDRCAFAVSDWFKGVGVPFDLIVSNPPYIALDEMAGLAPEL-GYEPRLALTDEGDGLAAY 208 Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 R I G + HL + G VEIG Q V+ +FE L V D G DRV++ Sbjct: 209 REITAGAAGHLRQGGWLMVEIGPTQGGAVIALFEVAGLEQVGIRVDLDGRDRVVV 263 >gi|221639322|ref|YP_002525584.1| Modification methylase, HemK family [Rhodobacter sphaeroides KD131] gi|221160103|gb|ACM01083.1| Modification methylase, HemK family [Rhodobacter sphaeroides KD131] Length = 278 Score = 144 bits (362), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 89/259 (34%), Positives = 132/259 (50%), Gaps = 8/259 (3%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 +A RD+ L + ++ + L A+ + + + +I+G R F+ Sbjct: 21 EAARDARRLLAHAMAIDPARLTLHLPDPLPPEAAARFEAALAARVARQPVGQIVGERLFW 80 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 R ++ DT +PRPETE L+++ALA +LDLGTGTG + + LL E P Sbjct: 81 GRRFRVTRDTLDPRPETEGLIEAALAEPF--------ATVLDLGTGTGCIAVTLLAERPA 132 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181 G+ D+S AL +A NA GV+ R + SDWF++V D+I+SNPPYI + + Sbjct: 133 AHGIATDLSPAALAVAAENAAALGVAPRLELRLSDWFAAVPERVDLILSNPPYIAADEMA 192 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 L EVR ++P ++L G DGL YR IA G HL G +EIG Q V + E+ Sbjct: 193 ALAPEVRLWEPHLALSPGGDGLDAYRAIARGAPAHLRPGGRLLLEIGAAQGRAVAGLVEA 252 Query: 242 RKLFLVNAFKDYGGNDRVL 260 L V+ D G DR++ Sbjct: 253 AGLAQVSVLPDLDGRDRLV 271 >gi|103488190|ref|YP_617751.1| HemK family modification methylase [Sphingopyxis alaskensis RB2256] gi|98978267|gb|ABF54418.1| modification methylase, HemK family [Sphingopyxis alaskensis RB2256] Length = 274 Score = 144 bits (362), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 89/262 (33%), Positives = 139/262 (53%), Gaps = 18/262 (6%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIV-RSLKHESIHRILGWRDFYNVR 64 D+ + G+ +++DP + D F +A+V R + HE + ILG+RDF+ +R Sbjct: 25 DAELLMADALGIERQALLLDP-ARYDVPADF---DALVERRMAHEPVAYILGYRDFWTIR 80 Query: 65 LTLSSDTFEPRPETELLVDSAL---AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 L + PRP++E L+ +A+ + PR ILDLGTG G + A + E Sbjct: 81 LAVGPGALIPRPDSETLIAAAVQHFGAAGPR-------HILDLGTGPGTLLFAAMSEWAD 133 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181 +G+GVD S AL A++NA+ G+++R +Q DW + V G FD+I+ NPPYI + Sbjct: 134 ARGLGVDASDVALGYARANAIALGLADRVGLMQGDWAAGVTGRFDLILCNPPYIAE--SE 191 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 L +V D +P +L G DGL+ YR I + L G+ +EIG+ Q++ V + ++ Sbjct: 192 ALMPDVADHEPAGALFAGADGLADYRRIIPDLPHLLAPGGIAILEIGHTQRISVSEMADA 251 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 F V +D G DR LL Sbjct: 252 AG-FAVACRQDLAGRDRALLLT 272 >gi|109898877|ref|YP_662132.1| HemK family modification methylase [Pseudoalteromonas atlantica T6c] gi|109701158|gb|ABG41078.1| [protein release factor]-glutamine N5-methyltransferase [Pseudoalteromonas atlantica T6c] Length = 298 Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 97/273 (35%), Positives = 139/273 (50%), Gaps = 20/273 (7%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A DS +C V + ++ P+ LD+ Q + + I +LG+RDF++ Sbjct: 30 AALDSRLLMCHVLQCETAYLMTWPEKPLDELQLRTYQQLVAKRKTGYPIAYLLGYRDFWS 89 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 +RL +S T PRPETELLV++ L +LP E +LDLGTGTGA+ LAL E P + Sbjct: 90 LRLRVSPATLIPRPETELLVETVL--NLPIAED---AHVLDLGTGTGAIALALASEKPNW 144 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVE-----------GLFDVIVS 170 + +G+D S A+ +AK NA N + + RF +QSDWFS++E +F +IVS Sbjct: 145 QVLGIDKSADAVALAKQNAELNSLPQVRF--MQSDWFSALEQTQLDQQNNQHNVFSLIVS 202 Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230 NPPY+E V +VR F+P +L G DGL R I L G + E GY Sbjct: 203 NPPYVEDDSVYLQQGDVR-FEPASALTSGKDGLDDIRIIISKAITFLPSGGWLAFEHGYQ 261 Query: 231 QKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFC 263 Q V + + V++ D R+ L C Sbjct: 262 QAQGVQALLVNNGFEQVHSVNDLNDLPRITLGC 294 >gi|251792739|ref|YP_003007465.1| protein-(glutamine-N5) methyltransferase [Aggregatibacter aphrophilus NJ8700] gi|247534132|gb|ACS97378.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Aggregatibacter aphrophilus NJ8700] Length = 299 Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 96/268 (35%), Positives = 146/268 (54%), Gaps = 15/268 (5%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L T S ++ ++VL+ + LT + R LK E I +LG ++F+++ L Sbjct: 26 DALVLLQSATQKSRAFILAFGETVLEKKTLEKLTALLSRRLKGEPIAYLLGEKEFWSLPL 85 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDV----VRILDLGTGTGAVCLALLKESPF 121 +S T PRP+TE+LV+ A+ ++ +++K D RILDLGTGTGA+ LAL E F Sbjct: 86 AVSEKTLIPRPDTEVLVEKAVEIAIEKLQKCDQHSPSFRILDLGTGTGAIALALASELKF 145 Query: 122 FKG--------VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173 +GVD + +E+A++NA N ++ F LQS WF +V G FDVIVSNPP Sbjct: 146 VAQKQQIQLDIIGVDFLPEIVELARTNAKKNQLNVHF--LQSHWFDNVRGQFDVIVSNPP 203 Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233 YI++ +VR F+P +L G + R I + ++L ++G +E G+ Q Sbjct: 204 YIDNNDEHLNQGDVR-FEPLSALVAEEGGYTDLRHIIEHAPQYLTENGYLLLEHGWQQGE 262 Query: 234 DVVRIFESRKLFLVNAFKDYGGNDRVLL 261 V IF+ V +DYG N+RV L Sbjct: 263 KVRSIFQMNLWQDVETCRDYGNNERVTL 290 >gi|123442666|ref|YP_001006643.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122089627|emb|CAL12477.1| putative protoporphyrinogen oxidase [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 284 Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 95/257 (36%), Positives = 136/257 (52%), Gaps = 7/257 (2%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 RD+ L VTG + ++ ++ L Q L R + E I ++G R+F+++ Sbjct: 22 RDAEILLSFVTGRARSYLLAFGETQLTAEQLAVLEPLAARREQGEPIAYLVGEREFWSLP 81 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L++SS T PRP+TE LV+ ALA LP RILDLGTGTGA+ LAL E P Sbjct: 82 LSVSSATLIPRPDTECLVEQALAH-LPVTP----CRILDLGTGTGAIALALASERPDCAV 136 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184 +GVDI A+ +A+ NA ++ D LQS WF SV G F +IVSNPPYI++ Sbjct: 137 MGVDIKADAVALARHNAKKLAIN-NVDFLQSSWFDSVSGRFTLIVSNPPYIDANDPHLNE 195 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 +VR ++P +L +G++ I +L G +E G+ Q V ++ + Sbjct: 196 GDVR-YEPHSALVAEAEGIADLAEIIRQSPAYLEVGGWLMLEHGWQQATAVQKLLNNSGF 254 Query: 245 FLVNAFKDYGGNDRVLL 261 V +KDYG NDRV L Sbjct: 255 SAVMTYKDYGNNDRVTL 271 >gi|254362306|ref|ZP_04978418.1| protein-glutamine N-methyltransferase [Mannheimia haemolytica PHL213] gi|153093886|gb|EDN74814.1| protein-glutamine N-methyltransferase [Mannheimia haemolytica PHL213] Length = 288 Score = 143 bits (361), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 92/256 (35%), Positives = 142/256 (55%), Gaps = 4/256 (1%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D++ L VT S + +++L + + L + R K E + ILG+R+F+++ L Sbjct: 29 DANLLLQAVTKRSKSAIFAFSETLLSESELAELAEKLARRAKGEPMAYILGYREFWSLPL 88 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE-SPFFKG 124 +S T PRP+TE LV+ AL ++ R+ + +++ILDLGTGTGA+ LAL E + Sbjct: 89 KVSPATLIPRPDTERLVELALEYANKRLGNQKMLQILDLGTGTGAIALALASELGEKAQI 148 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183 +GVD +A+++A+ N G+++ LQSDWFSS+ FD+IVSNPPYI+ + Sbjct: 149 IGVDFQNEAVQLAEENRRNLGLNQ-VTFLQSDWFSSLANQQFDLIVSNPPYIDESDENLT 207 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 +VR F+P +L GLS + I + HL G +E G+ Q V +F+ Sbjct: 208 VGDVR-FEPLTALVADNKGLSDLQKIIENAPLHLKPQGALMLEHGWKQGNLVRDLFDLHL 266 Query: 244 LFLVNAFKDYGGNDRV 259 V +DY GNDRV Sbjct: 267 WEQVETAQDYAGNDRV 282 >gi|307942490|ref|ZP_07657839.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Roseibium sp. TrichSKD4] gi|307774311|gb|EFO33523.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Roseibium sp. TrichSKD4] Length = 280 Score = 143 bits (361), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 90/212 (42%), Positives = 117/212 (55%), Gaps = 6/212 (2%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV-RILDLGTGTG 109 + RILG R+FY + L++DT EPRP+TE+LVD+ L I D R LD+GTGTG Sbjct: 70 VGRILGVREFYGLEFQLNADTLEPRPDTEILVDTVL-----NIAPTDTAWRFLDVGTGTG 124 Query: 110 AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIV 169 A+ +AL S +G DIS AL AK+NA NGV R ++ + + G FD IV Sbjct: 125 AIAIALAANSALAEGAASDISEHALLAAKANAAMNGVEGRLSFVRGSYLAPFSGQFDWIV 184 Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY 229 SNPPYI S +V L VR +DP +LDGG DGL YR + L G ++EIG+ Sbjct: 185 SNPPYIASDVVRQLDTGVRAYDPLRALDGGADGLDAYRQLIPSAKELLAPSGHLALEIGF 244 Query: 230 NQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 +Q V + V KD G DRV+L Sbjct: 245 DQGKSVSSLCTDHGYCGVEIIKDLAGQDRVVL 276 >gi|118581410|ref|YP_902660.1| HemK family modification methylase [Pelobacter propionicus DSM 2379] gi|118504120|gb|ABL00603.1| [protein release factor]-glutamine N5-methyltransferase [Pelobacter propionicus DSM 2379] Length = 288 Score = 143 bits (361), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 93/262 (35%), Positives = 134/262 (51%), Gaps = 12/262 (4%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 ++ LC TGL + ++ D L+ + + R + E + ILG ++F + Sbjct: 31 EAEWLLCAATGLDRVGLYLNYDKPLNREELSAFRQMVARRARREPLQHILGSQEFCGLEF 90 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR-ILDLGTGTGAVCLALLKESPFFKG 124 +S D PR +TE LV+ AL + + R +LD+GTG+G + ++L + P + Sbjct: 91 AVSPDVLIPRHDTETLVEEAL-------RRAPLARTVLDIGTGSGCIAVSLARRLPGARI 143 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183 V DIS ALE+A++NA NGV F L V G FD+IVSNPPYI S + L Sbjct: 144 VASDISAVALEMARANARANGVDVEF--LHGSLLEPVAGRCFDLIVSNPPYIPSADIQLL 201 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 EVRD DPR++LDGG DGL YR + HL G +E+G Q DV +F Sbjct: 202 EPEVRDGDPRLALDGGPDGLDIYRRLIPASLEHLEPGGWLLLEVGMGQAQDVAEMFPLAD 261 Query: 244 LF-LVNAFKDYGGNDRVLLFCR 264 + V + D GG +RV+ R Sbjct: 262 GYGQVVSSPDPGGIERVVGAAR 283 >gi|157826325|ref|YP_001494045.1| bifunctional N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase/tRNA (m7G46) methyltransferase [Rickettsia akari str. Hartford] gi|157800283|gb|ABV75537.1| bifunctional N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase/tRNA (m7G46) methyltransferase [Rickettsia akari str. Hartford] Length = 522 Score = 143 bits (361), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 89/258 (34%), Positives = 134/258 (51%), Gaps = 19/258 (7%) Query: 22 VIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELL 81 ++++ D L + + + R LKHE I I G ++FY+ ++ PR +TE+L Sbjct: 43 LLINLDEQLSEAEIKAFEKLLERRLKHEPITYITGVKEFYSREFIVNKHVLIPRSDTEIL 102 Query: 82 VDSALA------------FSLPRIEKRDVV------RILDLGTGTGAVCLALLKESPFFK 123 VD L P +K D V IL+LGTG+G V ++LL E P Sbjct: 103 VDVVLQRYSHSTQGHSTESGKPETKKLDSVVNPRNDSILELGTGSGCVAISLLCELPNAN 162 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDC 182 + DIS +A+E+AKSNA+ + V++R + SDWF ++ + FDVIVSNPPYI Sbjct: 163 IIATDISIEAIEVAKSNAIKHHVTDRIQIIHSDWFENLGKQKFDVIVSNPPYISHSEKSE 222 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 + LE + +P +L DGL YR IA L +G +EIG+NQ V +IF + Sbjct: 223 MALETLNHEPHFALFAEEDGLQAYRIIAKNAKPFLKPNGKIILEIGFNQAEKVSKIFLNY 282 Query: 243 KLFLVNAFKDYGGNDRVL 260 + N +KD ++RV+ Sbjct: 283 GYNIDNIYKDLQSHNRVI 300 >gi|227824240|ref|ZP_03989072.1| modification methylase [Acidaminococcus sp. D21] gi|226904739|gb|EEH90657.1| modification methylase [Acidaminococcus sp. D21] Length = 298 Score = 143 bits (361), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 93/261 (35%), Positives = 137/261 (52%), Gaps = 8/261 (3%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ LC V G+ + D L+ + ++R K E + ILG + F + Sbjct: 30 DAELLLCAVLGMRRIDLYTHFDQPLEKEELAAYRGYVMRRAKREPVAYILGEKGFLDYTF 89 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 +++DT PRPETELLV+ LA + + IL+LG G+GA+ ++LL + +G+ Sbjct: 90 AVTADTLIPRPETELLVEKILA-----VTADGPLDILELGVGSGAILISLLLKRKEAQGL 144 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EG-LFDVIVSNPPYIESVIVDCL 183 GVDIS A+ +A+ NA GV++R + + SD F V EG FD+IVSNPPYI + L Sbjct: 145 GVDISEGAVAVARKNAKNLGVTDRSEIIVSDLFEKVPEGRKFDLIVSNPPYIPKKDLAGL 204 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 EVR +P +LDGG DGL YR I +L +DGL + E+G + + Sbjct: 205 SPEVRK-EPLGALDGGEDGLDFYRRIVREGMAYLKEDGLFAFEVGIGEGAAAADLLVQNG 263 Query: 244 LFLVNAFKDYGGNDRVLLFCR 264 F DY G DR++L + Sbjct: 264 CGAARVFLDYAGIDRMVLAAK 284 >gi|297182949|gb|ADI19097.1| methylase of polypeptide chain release factors [uncultured alpha proteobacterium HF0070_34A12] Length = 247 Score = 143 bits (361), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 85/205 (41%), Positives = 118/205 (57%), Gaps = 8/205 (3%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 DS L GL + + + DD + R L E + RI GWR+F+ +RL Sbjct: 30 DSRLLLGTALGLDRAVLPHETLAGFDDAAAAMFEAFLNRRLGGEPVSRIRGWREFWTLRL 89 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 L+ T +PRP++E +V +ALA + P R+LDLG GTGA+ LA L E P G Sbjct: 90 ELAPATLDPRPDSETIVAAALAATDPG----KPCRMLDLGCGTGALLLACLSERPDATGT 145 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS---VEGLFDVIVSNPPYIESVIVDC 182 GVDI+ +A+E+A NA NG+S R D + D FS G++D+I+ NPPYI + +D Sbjct: 146 GVDIAGEAVEVATRNAGKNGLSARADFVIGD-FSDPDVAPGIYDLILCNPPYIPAGEIDG 204 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYR 207 L +EV FDPR++LDGG DGL +R Sbjct: 205 LAVEVACFDPRLALDGGDDGLDCWR 229 >gi|320109110|ref|YP_004184700.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Terriglobus saanensis SP1PR4] gi|319927631|gb|ADV84706.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Terriglobus saanensis SP1PR4] Length = 286 Score = 143 bits (360), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 79/227 (34%), Positives = 124/227 (54%), Gaps = 5/227 (2%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A+RDSH L G+S Q++ P+ +L RQ + + L+ I + G ++FY Sbjct: 30 AVRDSHLLLQHALGVSREQIMAWPERMLTPRQSAAFEHLVSERLRAVPIQYLRGQQEFYG 89 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 ++ D PRPETEL++D + I+ +V I D+G+G+GA+ + L E Sbjct: 90 RNFLVTPDVLIPRPETELIIDEVKRY----IDPSALVMIADIGSGSGAIGVTLAAEFEMA 145 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVD 181 + D+S AL + + NA+ + VS+R T +SD FS++ E +FD +VSNPPYI + D Sbjct: 146 RITAADLSPAALAVTEQNAIRHHVSDRVRTFESDLFSALGERIFDYVVSNPPYIAASERD 205 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228 L +VRD +P ++L GG DG Y + +HL G+ +EIG Sbjct: 206 SLHPQVRDHEPELALYGGEDGFEIYTRLIPQAWKHLRPGGMLFLEIG 252 >gi|254440594|ref|ZP_05054088.1| methyltransferase, HemK family [Octadecabacter antarcticus 307] gi|198256040|gb|EDY80354.1| methyltransferase, HemK family [Octadecabacter antarcticus 307] Length = 272 Score = 143 bits (360), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 90/220 (40%), Positives = 120/220 (54%), Gaps = 9/220 (4%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101 + R E + + G RDFY R + D +PRP+TE LV +AL +R R+ Sbjct: 57 VARRAAREPMSHLTGGRDFYEHRFEVGPDVLDPRPDTESLVIAAL--------ERPFDRV 108 Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 LDLGTG+G V L+LL P +GVG D+S AL +A NA + R D + SDW++S+ Sbjct: 109 LDLGTGSGCVLLSLLAARPDARGVGSDVSAAALVVAARNAAKLEIDHRVDLIVSDWYASI 168 Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221 G FD+IVSNPPY+ + L E+ ++PRI+L G DGL YR I G HL G Sbjct: 169 YGQFDLIVSNPPYLALAEMASLAPEL-SYEPRIALTDGGDGLGCYRVITAGAGEHLTAGG 227 Query: 222 LCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 VEIG +Q VV +F + L V D DRV+L Sbjct: 228 WLMVEIGPSQGAAVVAMFGAAGLVCVQIRHDLDARDRVVL 267 >gi|255994692|ref|ZP_05427827.1| protein-(glutamine-N5) methyltransferase [Eubacterium saphenum ATCC 49989] gi|255993405|gb|EEU03494.1| protein-(glutamine-N5) methyltransferase [Eubacterium saphenum ATCC 49989] Length = 307 Score = 142 bits (359), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 96/264 (36%), Positives = 136/264 (51%), Gaps = 16/264 (6%) Query: 10 FLCRVTGLSSHQVIVDPDSVLDDRQ----------RFFLTNAIVRSLKHESIHRILGWRD 59 C G+S ++++ L RQ R + + I R LK + + ILG + Sbjct: 41 LFCFAAGISKSELLLRQSRALSPRQGRSAFGEDVYRKY-DSIIARRLKRKPLQHILGSVN 99 Query: 60 FYNVRLTLSSDTFEPRPETELLVDSAL-AFSLPRIEKRD-VVRILDLGTGTGAVCLALLK 117 F+ + PR ETELLV+ L + + E R+ +++LDL TGTG + + + K Sbjct: 100 FFGFDFKVDERALIPRFETELLVEKTLEKIEVLQNETREKSIKVLDLCTGTGVIGITVKK 159 Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS-VEGLFDVIVSNPPYIE 176 P + DIS ALE+A N+ + R +QSD F + FD+IVSNPPYI Sbjct: 160 TIPDVECTLSDISSDALELAADNSKSLKADVRI--VQSDLFEEFADEKFDIIVSNPPYIR 217 Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236 +D L LEVR+FDP ++LDGG DGL YR IAD V +L + G EIG +Q DVV Sbjct: 218 RADIDKLQLEVREFDPHLALDGGEDGLELYRNIADEVQNYLKRSGYLICEIGADQGDDVV 277 Query: 237 RIFESRKLFLVNAFKDYGGNDRVL 260 +IF+ KD+ DR+L Sbjct: 278 KIFKEAGAVNARIIKDFTDKDRIL 301 >gi|77463464|ref|YP_352968.1| putative methylase [Rhodobacter sphaeroides 2.4.1] gi|77387882|gb|ABA79067.1| Putative methylase [Rhodobacter sphaeroides 2.4.1] Length = 278 Score = 142 bits (359), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 89/259 (34%), Positives = 131/259 (50%), Gaps = 8/259 (3%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 +A RD+ L + ++ + L A+ + + +I+G R F+ Sbjct: 21 EAARDARRLLAHAMAIDPARLTLHLPDPLPPEAAARFEAALAARAARQPVGQIVGERLFW 80 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 R ++ DT +PRPETE L+++ALA +LDLGTGTG + + LL E P Sbjct: 81 GRRFRVTRDTLDPRPETEGLIEAALAEPF--------ATVLDLGTGTGCIAVTLLAERPA 132 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181 G+ D+S AL +A NA GV+ R + SDWF++V D+I+SNPPYI + + Sbjct: 133 AHGIATDLSPAALAVAAENAAALGVASRLELRLSDWFAAVPERVDLILSNPPYIAADEMA 192 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 L EVR ++P ++L G DGL YR IA G HL G +EIG Q V + E+ Sbjct: 193 ALAPEVRLWEPHLALSPGGDGLDAYRAIARGAPAHLRPGGRLLLEIGAAQGRAVAGLVEA 252 Query: 242 RKLFLVNAFKDYGGNDRVL 260 L V+ D G DR++ Sbjct: 253 AGLARVSVLPDLDGRDRLV 271 >gi|157964997|ref|YP_001499821.1| bifunctional N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase/tRNA (m7G46) methyltransferase [Rickettsia massiliae MTU5] gi|157844773|gb|ABV85274.1| Methylase of polypeptide chain release factors [Rickettsia massiliae MTU5] Length = 511 Score = 142 bits (359), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 85/251 (33%), Positives = 133/251 (52%), Gaps = 10/251 (3%) Query: 22 VIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELL 81 ++++ D L++ + + R LKHE I I G ++FY+ ++ PR +TE+L Sbjct: 43 LLINLDEQLNEAEIEAFEKLLERRLKHEPIVYITGVKEFYSREFIVNKHVLIPRSDTEVL 102 Query: 82 VDSALAFSLPRIEKRDV--------VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133 VD PR D+ + IL+LGTG+G + ++LL E P + DIS A Sbjct: 103 VDVVFQCH-PRFRGDDISENCNDKFLNILELGTGSGCIAISLLCELPNANVIATDISLDA 161 Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDP 192 +EI KSNA V++R + S+WF ++E FD IVSNPPYI + +E +++P Sbjct: 162 IEIIKSNAAKYSVTDRIQIIHSNWFENIETQKFDFIVSNPPYIAHSEKSEMAIETINYEP 221 Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKD 252 I+L DGL Y IA+ + L +G +EIG+ Q+ V +IF + + +KD Sbjct: 222 SIALFAEKDGLHAYFLIAENAKQFLKPNGKIILEIGFKQEEAVTQIFLDHGYNIESVYKD 281 Query: 253 YGGNDRVLLFC 263 G+ RV+LF Sbjct: 282 LQGHSRVILFT 292 >gi|125974913|ref|YP_001038823.1| HemK family modification methylase [Clostridium thermocellum ATCC 27405] gi|256003830|ref|ZP_05428817.1| modification methylase, HemK family [Clostridium thermocellum DSM 2360] gi|281418621|ref|ZP_06249640.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Clostridium thermocellum JW20] gi|125715138|gb|ABN53630.1| modification methylase, HemK family [Clostridium thermocellum ATCC 27405] gi|255992168|gb|EEU02263.1| modification methylase, HemK family [Clostridium thermocellum DSM 2360] gi|281407705|gb|EFB37964.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Clostridium thermocellum JW20] gi|316939124|gb|ADU73158.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Clostridium thermocellum DSM 1313] Length = 302 Score = 142 bits (358), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 93/275 (33%), Positives = 143/275 (52%), Gaps = 26/275 (9%) Query: 10 FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69 LCRV + + D + + + T + +K + + I G ++F ++ ++ Sbjct: 29 LLCRVLNVDRSYLYSHDDYNMTEEEYKKFTLFLEERIKGKPLQYITGHQEFMSLDFIVTP 88 Query: 70 DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL---LKESPFFKGVG 126 D PR +TE LV++ L + + RILD+GTG+G + ++L LK+S + + Sbjct: 89 DVLIPRQDTETLVEAVLTHV--KSTGLENARILDIGTGSGCIAVSLAHFLKDS---RVLA 143 Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-----------------EGLFDVIV 169 +DIS KALEIA++NA GV +R L+ D + EG FD+IV Sbjct: 144 LDISEKALEIAETNAKRCGVWDRMFFLKGDALEGLAGIIAQSPFAKDFERKGEGFFDIIV 203 Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY 229 SNPPYI S + L +V+D++PR +LDGGIDGL YR I ++ L+ D L + E+GY Sbjct: 204 SNPPYIPSEEIKTLHKQVKDYEPRTALDGGIDGLDFYRAITCEAAKLLSTDSLLAFEVGY 263 Query: 230 NQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 NQ +V F + KD G DRV++ CR Sbjct: 264 NQAENVSE-FMKESFSAIKVVKDLAGIDRVVMGCR 297 >gi|237745911|ref|ZP_04576391.1| methyltransferase HemK MTase hemK [Oxalobacter formigenes HOxBLS] gi|229377262|gb|EEO27353.1| methyltransferase HemK MTase hemK [Oxalobacter formigenes HOxBLS] Length = 287 Score = 142 bits (358), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 96/255 (37%), Positives = 137/255 (53%), Gaps = 14/255 (5%) Query: 10 FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69 L G S ++I D VL D + +++ + R L+ E + I G R+FY + ++ Sbjct: 35 LLEHALGFSRVKLITHSDHVLTDAEANAVSDVLARRLRGEPVAYITGIREFYGLPFAVTP 94 Query: 70 DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129 D PRPETELLVD ALA LP + R++DLGTG+GA+ +A+ P + DI Sbjct: 95 DVLIPRPETELLVDLALA-RLP-----EGGRVVDLGTGSGAIAVAIAAMRPDAQVWATDI 148 Query: 130 SCKALEIAKSNAVT---NGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIESVIVDCLG 184 S KAL+IA+ NA + NG S RF Q +W+ ++E FD+IVSNPPYI S Sbjct: 149 SGKALDIARKNAASCLKNGQSVRFR--QGNWYEALEPGSRFDLIVSNPPYIHSADEHLRK 206 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 ++R F+P +L DGLS + D +L K G +E GYNQ V + +K Sbjct: 207 GDLR-FEPLSALTDYTDGLSAMDILIDQAPAYLKKGGELLMEHGYNQSGAVRKKLVDKKY 265 Query: 245 FLVNAFKDYGGNDRV 259 V ++KD G +RV Sbjct: 266 LQVQSWKDLAGIERV 280 >gi|160878571|ref|YP_001557539.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Clostridium phytofermentans ISDg] gi|160427237|gb|ABX40800.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Clostridium phytofermentans ISDg] Length = 279 Score = 142 bits (357), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 92/257 (35%), Positives = 136/257 (52%), Gaps = 13/257 (5%) Query: 6 DSHSFLCRVTGLS--SHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63 D+ L VTGL + + D ++ +R+ + + H + + G ++F + Sbjct: 28 DAWYLLEHVTGLRRIDYMIRAKEDMSIEVYERY--QQLLKKRALHIPLQYLTGSQEFMGL 85 Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 ++ PR +TE LV+ L S + +DV L+L TG+G + ++L K Sbjct: 86 SFRVNESVLIPRQDTERLVEEVLKVS----KDKDV---LELCTGSGCIIISLAKLGNIKN 138 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183 V VDIS A+++AK NA N V + L SD FS+V G +DVIVSNPPYIES +++ L Sbjct: 139 AVAVDISSDAIKVAKENAKDNEVLVTY--LLSDMFSNVSGTYDVIVSNPPYIESEVIEGL 196 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 EV+D +PRI+LDG DGL YR +A R LNK+G +EIG NQ + + Sbjct: 197 MPEVKDHEPRIALDGDADGLKFYRILAKESGRFLNKNGRLYLEIGCNQAAFIGELLSQNG 256 Query: 244 LFLVNAFKDYGGNDRVL 260 + KDY G DRV+ Sbjct: 257 FAQIKVVKDYAGLDRVV 273 >gi|315651890|ref|ZP_07904893.1| protein-(glutamine-N5) methyltransferase [Eubacterium saburreum DSM 3986] gi|315485892|gb|EFU76271.1| protein-(glutamine-N5) methyltransferase [Eubacterium saburreum DSM 3986] Length = 281 Score = 142 bits (357), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 92/236 (38%), Positives = 138/236 (58%), Gaps = 14/236 (5%) Query: 30 LDDRQRF-FLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAF 88 + DR++ L + + + L++ I IL F + PR +TE+LV+ L Sbjct: 49 IKDREKLDILESYVSKRLENMPIQYILNKAYFCGFPFFVDKSVLIPRFDTEVLVEEIL-- 106 Query: 89 SLPRIEKRDV-VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147 RI K D +ILD+ TG+GA+ ++L K F + VDIS ALEIAK NAV G Sbjct: 107 ---RIAKGDKNKKILDMCTGSGAIAISLKKLGGFERVDAVDISNDALEIAKKNAVGLGCD 163 Query: 148 ERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSH 205 F +SD FS + E +D+IVSNPPYI+S +VD L EV+DF+PR++LDG IDG+ Sbjct: 164 INFS--KSDMFSGLTSENKYDIIVSNPPYIKSHMVDSLESEVKDFEPRLALDGDIDGMKF 221 Query: 206 YRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 Y+ I + ++LN +G+ ++EIGY++ D+ ++F+ F +N KD DRV + Sbjct: 222 YKIIKENFIKYLNPEGILALEIGYDEAKDIRKLFDG---FDINIKKDLSNLDRVAI 274 >gi|114319434|ref|YP_741117.1| HemK family modification methylase [Alkalilimnicola ehrlichii MLHE-1] gi|114225828|gb|ABI55627.1| [protein release factor]-glutamine N5-methyltransferase [Alkalilimnicola ehrlichii MLHE-1] Length = 295 Score = 142 bits (357), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 82/219 (37%), Positives = 121/219 (55%), Gaps = 6/219 (2%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101 + R L E + + G R F+++ L ++++T PRPETELLV++ALA R++ +R+ Sbjct: 76 LARRLAGEPVAHLTGRRGFWSLELKVTAETLIPRPETELLVEAALA----RVDGDRQLRV 131 Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 DLGTGTGA+ LAL E P ++ V+ S AL +A+ NA G+++R + WF + Sbjct: 132 ADLGTGTGAIALALADECPAWRVTAVEASAGALVVARENARRLGLADRVQVVAGSWFGPL 191 Query: 162 EG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220 G FD++VSNPPY+ + +VR F+PR +L G DGL R I HL Sbjct: 192 AGERFDLVVSNPPYVGVHEPELYEGDVR-FEPRSALAAGRDGLGDLRRIVGEAPGHLVAG 250 Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRV 259 G VE G+ Q V R+F V +D G++RV Sbjct: 251 GWLMVEHGFQQGEAVRRLFLEAGFGGVETLRDLAGHERV 289 >gi|237742324|ref|ZP_04572805.1| methyltransferase [Fusobacterium sp. 4_1_13] gi|229429972|gb|EEO40184.1| methyltransferase [Fusobacterium sp. 4_1_13] Length = 370 Score = 141 bits (356), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 79/222 (35%), Positives = 128/222 (57%), Gaps = 7/222 (3%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101 ++R+ K + + ILG +FY + +S PR +TE+LV+ + + +E+ + I Sbjct: 131 VLRAKKRKPLQYILGEWEFYGLPFKVSEGVLIPRADTEILVEQCIQL-MREVEEPN---I 186 Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 LD+G+GTGA+ +A+ E G+DI+ KA+E+A N N + E + ++SD F + Sbjct: 187 LDIGSGTGAISIAIANELKSSSVTGIDINEKAIELANENKTLNKI-ENVNFIKSDLFEKI 245 Query: 162 EGLF--DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 + F D+IVSNPPYI + L EV++++P+ +L DGL YR I+ HL Sbjct: 246 DKDFKYDLIVSNPPYISKNEYETLMPEVKNYEPQNALTDLGDGLYFYREISKLAGEHLKD 305 Query: 220 DGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 + EIGYNQ DV +I ++ +++ KDYGGNDRV++ Sbjct: 306 TAYLAYEIGYNQAKDVTKILQNNNFDILSVIKDYGGNDRVVI 347 >gi|121534883|ref|ZP_01666702.1| modification methylase, HemK family [Thermosinus carboxydivorans Nor1] gi|121306482|gb|EAX47405.1| modification methylase, HemK family [Thermosinus carboxydivorans Nor1] Length = 289 Score = 141 bits (356), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 89/260 (34%), Positives = 134/260 (51%), Gaps = 6/260 (2%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L + G + ++ D L+ + A+ + + + I G ++F + Sbjct: 33 DAEVLLSHILGRDRLYLYLNYDQPLEPAELAAFREAVKKRVLRVPVAYITGHKEFMGLDF 92 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 ++SD PRP+TE+LV++ALA R+ +LDLGTG+GA+ ++LL G+ Sbjct: 93 IVTSDVLVPRPDTEVLVEAALA----RLAGVSTPVVLDLGTGSGAIIVSLLHRLQAATGI 148 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLG 184 GVDIS AL +A++NA +GV+ R Q D F+ V G FD IV+NPPYI + L Sbjct: 149 GVDISPGALAVARANAQKHGVAARLALKQGDLFAPVAGQAFDAIVANPPYIPDGDIAGLE 208 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 EVR +PR +L GG DGL YR I HL +VE+G Q V + L Sbjct: 209 PEVR-HEPRTALAGGADGLDFYRRIVAMAPGHLKDGAFLAVEVGCGQAAAVAGLAAVSGL 267 Query: 245 FLVNAFKDYGGNDRVLLFCR 264 + +DY G +RV++ R Sbjct: 268 GVEAVIRDYAGIERVVVMRR 287 >gi|221135299|ref|ZP_03561602.1| peptide release factor-glutamine N5-methyltransferase(HemK) [Glaciecola sp. HTCC2999] Length = 286 Score = 141 bits (356), Expect = 9e-32, Method: Compositional matrix adjust. Identities = 86/256 (33%), Positives = 129/256 (50%), Gaps = 8/256 (3%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ LC V + + PD VL Q+ + I + + I ILG+++FY Sbjct: 29 DAQCLLCAVLDCNRAYLHTWPDKVLSSTQQTEFLHFIEQRQTGKPIAYILGYQNFYGYDF 88 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 +S T PRPETE VD +A K + R+LDLGTGTGA+ L+++ + P + + Sbjct: 89 AVSPVTLIPRPETEQCVDLVIA-------KPYIKRVLDLGTGTGAIALSIILQRPELEVL 141 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185 GVD +A+ +A+ NA QSDWFS V+G FDVIVSNPPY+E Sbjct: 142 GVDFVPEAVMLAQQNAQNLAPKSNISFKQSDWFSHVDGRFDVIVSNPPYVEPDSPYLAKG 201 Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245 ++R F+P +L +GL+ I +LN++GL +E G+ Q ++ ++ Sbjct: 202 DIR-FEPNSALTAAENGLADIIRIVSEAKHYLNENGLVILEHGHTQGTEIRQLMTQNGFT 260 Query: 246 LVNAFKDYGGNDRVLL 261 V DY G R+ L Sbjct: 261 NVTTLCDYAGQHRITL 276 >gi|23015679|ref|ZP_00055448.1| COG2890: Methylase of polypeptide chain release factors [Magnetospirillum magnetotacticum MS-1] Length = 283 Score = 141 bits (355), Expect = 9e-32, Method: Compositional matrix adjust. Identities = 87/260 (33%), Positives = 131/260 (50%), Gaps = 5/260 (1%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 DS V G+ ++ + L L + R E + ILG R F+ Sbjct: 26 DSRLMAAEVLGVEMRRLPASHHAELSPEDAARLAAMLDRRAAREPMSHILGRRGFWTHDF 85 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRD-VVRILDLGTGTGAVCLALLKESPFFKG 124 ++ DT +PRP+TE L+++ L ++ R +R++D GTGTG + L LL E G Sbjct: 86 LVTKDTLDPRPDTETLIEAVLGA----LDDRGRPLRLVDFGTGTGCILLTLLSELGHATG 141 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184 +G+D S AL +A NA G++ R DW ++G+FD+IVSNPPYI +D L Sbjct: 142 LGIDASEAALAVAGDNAERLGLASRAQFRLGDWGWGLDGVFDIIVSNPPYIPDGDIDGLE 201 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 EV ++PR +L GG DGL YR + ++R L GL ++E+G Q DV + + L Sbjct: 202 PEVSRYEPRSALAGGADGLDCYRALIPHMARLLVPGGLAALEVGAGQASDVAAMLAAAGL 261 Query: 245 FLVNAFKDYGGNDRVLLFCR 264 D GG +R ++ R Sbjct: 262 PGAGFRCDLGGIERCVIVQR 281 >gi|294782569|ref|ZP_06747895.1| methyltransferase [Fusobacterium sp. 1_1_41FAA] gi|294481210|gb|EFG28985.1| methyltransferase [Fusobacterium sp. 1_1_41FAA] Length = 382 Score = 141 bits (355), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 82/222 (36%), Positives = 127/222 (57%), Gaps = 7/222 (3%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101 ++R+ + + ILG +FY + + + PRP+TE+LV+ + + IE+ + I Sbjct: 144 MLRAKNRKPLQYILGEWEFYGLPFKVRENVLIPRPDTEILVEQCIQL-MREIEEPN---I 199 Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 LD+G+G+GA+ +A+ E GVDI+ A+E+A N V N V E + ++SD F + Sbjct: 200 LDIGSGSGAISIAIANELKSSSVTGVDINEDAIELANENKVLNKV-ENVNFMKSDLFEKL 258 Query: 162 EGLF--DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 + F D+IVSNPPYI + L EV++F+P+ +L DGL YR I+ +L Sbjct: 259 DEDFKYDLIVSNPPYITKEEYESLMPEVKNFEPKNALTDLGDGLHFYREISKKAGSYLKD 318 Query: 220 DGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 G + EIGY Q DV +I E +++ KDYGGNDRV+L Sbjct: 319 TGYLAFEIGYKQAKDVSKILEDNNFAILSVVKDYGGNDRVVL 360 >gi|296116160|ref|ZP_06834778.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Gluconacetobacter hansenii ATCC 23769] gi|295977266|gb|EFG84026.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Gluconacetobacter hansenii ATCC 23769] Length = 291 Score = 141 bits (355), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 86/221 (38%), Positives = 122/221 (55%), Gaps = 4/221 (1%) Query: 44 RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103 RSL HE + + G F+++ L +S T PR +TE LV++ L R ++ D+ ILD Sbjct: 71 RSL-HEPLSYLTGRAGFWSMTLDVSPATLIPRADTETLVEALLEL---RPDRTDISTILD 126 Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG 163 LGTGTG + LA L+E P G+GVD+S A +A NA G+S+R + + +W ++ G Sbjct: 127 LGTGTGCLLLAALQEYPQAWGLGVDLSPDAARLALGNARNVGLSDRCNIICGNWAQAITG 186 Query: 164 LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223 FDV+ SNPPYI + L +VRD +P +LDGG DGL YR + + R L GL Sbjct: 187 RFDVVFSNPPYIPHADLSGLMPDVRDHEPHRALDGGDDGLVCYRILMQSLPRLLKPRGLG 246 Query: 224 SVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 VE+G Q V + + +V D GG R L+ R Sbjct: 247 IVELGIGQDHSVPALARDAGMDIVAIRPDLGGVGRALIVRR 287 >gi|291532655|emb|CBL05768.1| [protein release factor]-glutamine N5-methyltransferase [Megamonas hypermegale ART12/1] Length = 293 Score = 141 bits (355), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 86/260 (33%), Positives = 134/260 (51%), Gaps = 1/260 (0%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L V G + V D ++ ++ + + +H + ILG R+F + Sbjct: 32 DAEVLLSHVLGQKRIYLYVHFDEPMEAKELAKFREYVAKRARHIPVAYILGQREFMGLDF 91 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 ++ DT PRP+TE+LV++ +A + I+D+GTG+GA+ L+LLK P KG Sbjct: 92 KVTKDTLIPRPDTEILVENTIAKVNENFGDKQSYDIVDIGTGSGAIILSLLKNLPKAKGF 151 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLG 184 VDIS + +AK NA V +R + D F V + +FDVIVSNPPYI + L Sbjct: 152 TVDISANVVAVAKENAQNLQVDDRCEFFVGDLFEPVKDKVFDVIVSNPPYIPQKDIATLE 211 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 ++V+D++P +L DGLS Y+ + ++L G +VEIG Q V ++ Sbjct: 212 IDVKDYEPLSALTDNKDGLSFYQRLFTQGMKYLKNGGFMAVEIGIYQAEPVKQMAIDNGW 271 Query: 245 FLVNAFKDYGGNDRVLLFCR 264 + KDY G DRV+L + Sbjct: 272 QNIEIIKDYAGIDRVVLAWK 291 >gi|310659437|ref|YP_003937158.1| methyltransferase [Clostridium sticklandii DSM 519] gi|308826215|emb|CBH22253.1| Methyltransferase [Clostridium sticklandii] Length = 283 Score = 140 bits (354), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 79/242 (32%), Positives = 135/242 (55%), Gaps = 3/242 (1%) Query: 22 VIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELL 81 ++++ + +D+ + + I + + ILG R+F+ + +S PR +TE+L Sbjct: 39 IMLNLEEDIDESKVEIIKTMIEKRKNSYPLQYILGEREFWGMDFNVSEGVLIPRQDTEIL 98 Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 ++ L K ++ + ++G G+G + + LLKE +GVDI+ KA+E+ K+NA Sbjct: 99 IEETLKKLKNHKHKSNL-KGFEIGVGSGIISITLLKEIETLIMIGVDINDKAIELTKANA 157 Query: 142 VTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199 + VS+R L S+ F + E FD I+SNPPYIE+ ++D L +++ +P+++LDGG Sbjct: 158 SKHQVSDRLCILNSNLFEKINKENQFDFIISNPPYIETKVIDSLQEDIKQHEPKLALDGG 217 Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRV 259 DGL YR I + +++ +G + EIGYNQ V +IF V KD G DRV Sbjct: 218 ADGLDFYRDIIEQSKHYISPEGFIAFEIGYNQAEAVKKIFVENGYQNVTIAKDLAGFDRV 277 Query: 260 LL 261 ++ Sbjct: 278 VI 279 >gi|152979100|ref|YP_001344729.1| HemK family modification methylase [Actinobacillus succinogenes 130Z] gi|150840823|gb|ABR74794.1| modification methylase, HemK family [Actinobacillus succinogenes 130Z] Length = 286 Score = 140 bits (354), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 94/265 (35%), Positives = 143/265 (53%), Gaps = 10/265 (3%) Query: 1 MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60 + A D++ L VT + Q+I D+VLD++ LT + R E + ILG +F Sbjct: 24 LNAKFDANLLLQSVTQKTKSQIIAFSDTVLDEKTLQNLTALLNRRATGEPVAYILGETEF 83 Query: 61 YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE-- 118 + + L +S T PRP+TE+LV+ AL RI +D V +LDLGTGTGA+ L+L KE Sbjct: 84 WTLSLKVSPHTLIPRPDTEILVERALE----RIPLKDGVSVLDLGTGTGAIALSLAKELK 139 Query: 119 --SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE 176 + +GVD+ +A+ +A+ NA N + + + +S WF+++ FD++VSNPPYI+ Sbjct: 140 KRGQKYWVLGVDLMPEAVVLAQRNAERNQLDD-VEFRRSSWFNNIHETFDLVVSNPPYID 198 Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236 + +VR F+P +L G + R I + R+LN G +E G+ Q V Sbjct: 199 ADDAHLTQGDVR-FEPLSALIAEEQGYADLRHIIEQTPRYLNPQGWLLLEHGWRQGEKVR 257 Query: 237 RIFESRKLFLVNAFKDYGGNDRVLL 261 F+ V KDYG N+RV L Sbjct: 258 SFFDENLWEKVATVKDYGDNERVTL 282 >gi|328473484|gb|EGF44332.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Vibrio parahaemolyticus 10329] Length = 285 Score = 140 bits (354), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 96/261 (36%), Positives = 137/261 (52%), Gaps = 11/261 (4%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ LC V G ++ P+ L+ Q+ + R L E + I+G R+F+++ L Sbjct: 29 DAAVLLCHVLGKPRTYLLTWPEKALEPEQQAQFDALLARRLAGEPVAYIIGEREFWSLPL 88 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 +S T PRP+TE LV+ AL + + ILDLGTGTGA+ LAL E P + + Sbjct: 89 KVSPTTLIPRPDTERLVEVALDKTYGQ-----TGSILDLGTGTGAIALALASELPSRQVM 143 Query: 126 GVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSV-EGL-FDVIVSNPPYIESVIVDC 182 GVD+ +A E+A+ NA + FD Q WF + EG F +IVSNPPYI+ Sbjct: 144 GVDLKQEAKELAEYNAAQLNIKNVTFD--QGSWFEPIAEGTKFALIVSNPPYIDEKDPHL 201 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 +VR F+P+ +L +GL+ R I+D ++L + G + E GY+Q V I Sbjct: 202 SQGDVR-FEPKSALVADENGLADIRHISDLARQYLEEGGWLAFEHGYDQGEAVREIMSGF 260 Query: 243 KLFLVNAFKDYGGNDRVLLFC 263 V KDYGGNDRV L C Sbjct: 261 GYQQVVTEKDYGGNDRVTLGC 281 >gi|322434295|ref|YP_004216507.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Acidobacterium sp. MP5ACTX9] gi|321162022|gb|ADW67727.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Acidobacterium sp. MP5ACTX9] Length = 282 Score = 140 bits (354), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 86/239 (35%), Positives = 124/239 (51%), Gaps = 6/239 (2%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 AL D+ L G+ S + P+ +D Q+ AI R L E I ILG ++FY Sbjct: 24 ALADAAILLTHTLGIDSTTLRAHPERPIDRDQQAVYQRAIERRLTFEPIQYILGTQEFYG 83 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + ++ PRPETE LV++ A R+ VRILD+GTG+GA+ +AL P Sbjct: 84 LPFRVTPAVLIPRPETEHLVEAVAA----RVPHNRPVRILDVGTGSGAIAIALAHLLPHA 139 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIESVIV 180 +DIS +A+EIA+ NA TN ++ R D QSD F++V F IVSNPPYI Sbjct: 140 HITALDISPEAIEIAQENARTNHLAARIDFQQSDLFTAVTKGPPFAAIVSNPPYIPLSDS 199 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 + L +VRD++P +L G G Y + L +GL ++EIG Q+ + + Sbjct: 200 ESLHPQVRDYEPHQALFSGPTGFEVYERLIIQAPSLLLPNGLIALEIGQGQQPRMAELL 258 >gi|28897518|ref|NP_797123.1| HemK protein [Vibrio parahaemolyticus RIMD 2210633] gi|260364111|ref|ZP_05776831.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Vibrio parahaemolyticus K5030] gi|260879266|ref|ZP_05891621.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Vibrio parahaemolyticus AN-5034] gi|260897558|ref|ZP_05906054.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Vibrio parahaemolyticus Peru-466] gi|260903528|ref|ZP_05911923.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Vibrio parahaemolyticus AQ4037] gi|28805730|dbj|BAC59007.1| HemK protein [Vibrio parahaemolyticus RIMD 2210633] gi|308086348|gb|EFO36043.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Vibrio parahaemolyticus Peru-466] gi|308089666|gb|EFO39361.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Vibrio parahaemolyticus AN-5034] gi|308110852|gb|EFO48392.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Vibrio parahaemolyticus AQ4037] gi|308114222|gb|EFO51762.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Vibrio parahaemolyticus K5030] Length = 285 Score = 140 bits (354), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 95/261 (36%), Positives = 137/261 (52%), Gaps = 11/261 (4%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ LC V G ++ P+ L+ Q+ + R L E + I+G R+F+++ L Sbjct: 29 DAAVLLCHVLGKPRTYLLTWPEKALEPEQQAQFNALLARRLAGEPVAYIIGEREFWSLPL 88 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 +S T PRP+TE LV+ AL + + ILDLGTGTGA+ LAL E P + + Sbjct: 89 KVSPTTLIPRPDTERLVEVALDKTYGQ-----TGSILDLGTGTGAIALALASELPNRQVM 143 Query: 126 GVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSV-EGL-FDVIVSNPPYIESVIVDC 182 GVD+ +A E+A+ NA + FD Q WF + EG F +IVSNPPY++ Sbjct: 144 GVDLKQEAKELAEYNAAQLNIKNVTFD--QGSWFEPIAEGTKFALIVSNPPYVDEKDPHL 201 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 +VR F+P+ +L +GL+ R I+D ++L + G + E GY+Q V I Sbjct: 202 SQGDVR-FEPKSALVADENGLADIRHISDLARQYLEEGGWLAFEHGYDQGEAVREIMRGF 260 Query: 243 KLFLVNAFKDYGGNDRVLLFC 263 V KDYGGNDRV L C Sbjct: 261 GYQQVVTEKDYGGNDRVTLGC 281 >gi|288942096|ref|YP_003444336.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Allochromatium vinosum DSM 180] gi|288897468|gb|ADC63304.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Allochromatium vinosum DSM 180] Length = 293 Score = 140 bits (354), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 93/248 (37%), Positives = 129/248 (52%), Gaps = 7/248 (2%) Query: 15 TGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEP 74 TG + ++ P+ D + R L E I I G ++F+ + L ++ DT P Sbjct: 45 TGWTRTSLLAWPERAPPDEAVATFEALLARRLTGEPIAYIRGRQEFWTLELRVTPDTLIP 104 Query: 75 RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134 RPETE LV+ +L R++ + +RI DLGTG+GA+ AL E P + V D S AL Sbjct: 105 RPETEQLVE----LALDRLDAQRPLRIADLGTGSGAIAAALASERPDWSLVATDRSAAAL 160 Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPR 193 +A+ N T G+ ER L+ DW +++ G D I+SNPPY+ + R F+PR Sbjct: 161 AVARDNFRTLGL-ERIGCLRMDWLAALASGSLDAILSNPPYVAGQDPHLDRGDPR-FEPR 218 Query: 194 ISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDY 253 +L G DGL RTIA R L GL +VE G++Q V RIF S L V +D Sbjct: 219 SALTPGGDGLDAIRTIAAETGRCLRPGGLLAVEHGFDQGDAVRRIFASAGLHRVETCRDL 278 Query: 254 GGNDRVLL 261 G DRV L Sbjct: 279 AGLDRVTL 286 >gi|119945324|ref|YP_943004.1| modification methylase, HemK family protein [Psychromonas ingrahamii 37] gi|119863928|gb|ABM03405.1| modification methylase, HemK family protein [Psychromonas ingrahamii 37] Length = 279 Score = 140 bits (354), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 93/262 (35%), Positives = 140/262 (53%), Gaps = 14/262 (5%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 AL D+ L V + ++ P+ L Q+ I + +K + + G R+F++ Sbjct: 20 ALLDAQVLLAFVLEKETVYLMTWPERELSQAQKSAFEGLISQRVKGVPVAHLTGAREFWS 79 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +++ T PRP+TELLV++AL + RILDLGTG+GA+ LAL E P Sbjct: 80 LPLKVNNSTLIPRPDTELLVEAALDYCSAD------ARILDLGTGSGAIILALASELPDA 133 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTL---QSDWFSSVEGLFDVIVSNPPYIESVI 179 +GVD++ A+++A + NG + + + + QS+WF ++ GLFDV+VSNPPYIE Sbjct: 134 YCLGVDVNESAVQLA----IENGKNLKLNNVHFQQSNWFDNINGLFDVVVSNPPYIEKND 189 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 +VR F+P +L +GL+ R IA +L K G VE G+NQ V +F Sbjct: 190 HHLKLGDVR-FEPLSALVADENGLADIRKIAQKTPEYLKKGGYLLVEHGFNQGSTVRELF 248 Query: 240 ESRKLFLVNAFKDYGGNDRVLL 261 V KDYG NDRV + Sbjct: 249 TDLGYSEVITIKDYGDNDRVTM 270 >gi|114766146|ref|ZP_01445150.1| modification methylase, HemK family protein [Pelagibaca bermudensis HTCC2601] gi|114541606|gb|EAU44648.1| modification methylase, HemK family protein [Roseovarius sp. HTCC2601] Length = 282 Score = 140 bits (353), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 94/259 (36%), Positives = 131/259 (50%), Gaps = 16/259 (6%) Query: 5 RDSHSFLCRVTGLSSHQV-IVDPDSVLDDRQRFFLTNAIVRS-LKHESIHRILGWRDFYN 62 RD+ L V + ++ + PD V + + L NA++ S H + I G R FY Sbjct: 24 RDARRLLAHVLKVPPGRLTLFLPDPV--ESEHALLFNAVIESRAAHVPVSHITGRRQFYG 81 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 ++ + +PRPETE+L+++ALA R+LDLGTG+G + L LL E Sbjct: 82 REFLVTPEVLDPRPETEILIEAALAGPF--------SRVLDLGTGSGCILLTLLCEREGA 133 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV----EGLFDVIVSNPPYIESV 178 G+G D+S +ALE+A N + R + WF ++ FD+IVSNPPYI Sbjct: 134 TGIGTDLSEEALEVAFWNRNALRLEARAALARGSWFGALGEDDRERFDLIVSNPPYIALD 193 Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238 +D L EVRD +PR++L DGL+ YR IA G HL G VEIG +Q V + Sbjct: 194 EMDDLSPEVRDHEPRMALTDEGDGLTAYRMIAAGAPSHLLPGGRLMVEIGPSQGAAVADL 253 Query: 239 FESRKLFLVNAFKDYGGND 257 F S L V D G D Sbjct: 254 FRSAGLQEVAVITDLDGRD 272 >gi|239948111|ref|ZP_04699864.1| bifunctional methyltransferase [Rickettsia endosymbiont of Ixodes scapularis] gi|239922387|gb|EER22411.1| bifunctional methyltransferase [Rickettsia endosymbiont of Ixodes scapularis] Length = 420 Score = 140 bits (353), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 87/267 (32%), Positives = 135/267 (50%), Gaps = 26/267 (9%) Query: 22 VIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELL 81 ++++ D L++ + + R LKHE I I G ++FY+ ++ PR +TE+L Sbjct: 43 LLINLDEQLNEAEIEAFEKLLKRRLKHEPIAYITGVKEFYSREFIVNKHVLIPRSDTEVL 102 Query: 82 VDSALAFSLP--RIEKRDVV-----------------------RILDLGTGTGAVCLALL 116 V L P R +R V +IL+LGTG+G + ++LL Sbjct: 103 VRIVLGLLKPSLRATERSVAISGILPEIASSTPMASSRNDEYTKILELGTGSGCIAISLL 162 Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYI 175 E P + DIS A+EI KSNA V +R + SDWF ++ + FD+IVSNPPYI Sbjct: 163 CELPNANVIATDISLDAIEIIKSNAAKYEVMDRLQVIHSDWFENLGKQKFDLIVSNPPYI 222 Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235 + +E +++P I+L DGL Y+TIA + L +G +EIG+ Q+ V Sbjct: 223 SHSEKSEMAIETINYEPSIALFAEEDGLQCYKTIAGNAKQFLKPNGKIILEIGFKQEEAV 282 Query: 236 VRIFESRKLFLVNAFKDYGGNDRVLLF 262 +IF + + N ++D G RV+LF Sbjct: 283 TQIFLDQSYNIENVYRDLQGYSRVILF 309 >gi|293392124|ref|ZP_06636458.1| protein methyltransferase HemK [Aggregatibacter actinomycetemcomitans D7S-1] gi|290952658|gb|EFE02777.1| protein methyltransferase HemK [Aggregatibacter actinomycetemcomitans D7S-1] Length = 299 Score = 140 bits (353), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 94/270 (34%), Positives = 148/270 (54%), Gaps = 15/270 (5%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L VT S ++ ++ LD++ LT + R L+ E I ILG ++F+++ L Sbjct: 26 DAQVLLQFVTQKSRAFILAFGETALDEKTLEKLTALLARRLQGEPIAYILGEKEFWSLPL 85 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEK----RDVVRILDLGTGTGAVCLALL----- 116 +S+ T PRP+TE+LV+ A+A ++ +++K RILDLGTGTGA+ LAL Sbjct: 86 NVSAGTLIPRPDTEILVEKAVAIAIEKLQKCGQNSQRFRILDLGTGTGAIALALASALKS 145 Query: 117 ---KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173 K + +GVD++ + + +AKSN N ++ F +QS WF +V G FD+I+SNPP Sbjct: 146 IAQKHAVQLDIIGVDLTPEVVALAKSNGAKNQLNVTF--VQSRWFENVTGTFDLILSNPP 203 Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233 YI++ +VR F+P +L +G + R I + + ++G VE G+ Q Sbjct: 204 YIDAHDEHLTQGDVR-FEPLSALVAAEEGYADLRHIIANAPKFMRENGYLLVEHGWQQGE 262 Query: 234 DVVRIFESRKLFLVNAFKDYGGNDRVLLFC 263 V IF+ V +DYG N+RV L C Sbjct: 263 KVRSIFQGNFWSAVETLRDYGNNERVTLGC 292 >gi|300723055|ref|YP_003712353.1| N5-glutamine methyltransferase [Xenorhabdus nematophila ATCC 19061] gi|297629570|emb|CBJ90173.1| N5-glutamine methyltransferase, modifies release factors RF-1 and RF-2 [Xenorhabdus nematophila ATCC 19061] Length = 286 Score = 140 bits (352), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 93/259 (35%), Positives = 139/259 (53%), Gaps = 10/259 (3%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 RD+ L VTG S +I ++++ + L + + R ++ E I I+G R+F+++ Sbjct: 22 RDAEILLQYVTGCSRTYLIAFSETLISPEEAHQLDSMLARRIRGEPIAYIVGEREFWSLS 81 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L +S T PRP+TE LV+ AL LP +ILDLGTGTGA+ LAL E Sbjct: 82 LAVSPATLIPRPDTECLVEKALEL-LP----DSPAQILDLGTGTGAIALALASERHDCHV 136 Query: 125 VGVDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSV-EGLFDVIVSNPPYIESVIV 180 GVDI+ A+ +AK NA N F + LQS+WF+ V FD+IVSNPPYI+ Sbjct: 137 TGVDINPDAVALAKRNAERNTEKLPFHYVNFLQSEWFAEVGHRQFDMIVSNPPYIDEADP 196 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 +VR F+P +L +G++ +TI + L +G +E G+ Q V +F Sbjct: 197 HLREGDVR-FEPATALIAAQNGMADLQTIVEQARHFLLPNGWLLLEHGWKQGTVVRNLFL 255 Query: 241 SRKLFLVNAFKDYGGNDRV 259 + + F+DYGGN+R+ Sbjct: 256 EKGYQRIATFQDYGGNERI 274 >gi|91206058|ref|YP_538413.1| bifunctional N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase/tRNA (m7G46) methyltransferase [Rickettsia bellii RML369-C] gi|122425238|sp|Q1RH40|HEMK_RICBR RecName: Full=Bifunctional methyltransferase; Includes: RecName: Full=HemK protein homolog; Includes: RecName: Full=tRNA (guanine-N(7)-)-methyltransferase; AltName: Full=tRNA(m7G46)-methyltransferase gi|91069602|gb|ABE05324.1| Methylase of polypeptide chain release factors [Rickettsia bellii RML369-C] Length = 556 Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 81/262 (30%), Positives = 139/262 (53%), Gaps = 23/262 (8%) Query: 22 VIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELL 81 ++ +P+ L+ + + + R LKHE I ILG ++FY+ ++ PR +TE+L Sbjct: 43 LLANPEKQLNQLEIEAVEKVLERRLKHEPIAYILGTKEFYSREFIVNKHVLIPRNDTEIL 102 Query: 82 VDSALAFSLPR-------------------IEKRDVVR---ILDLGTGTGAVCLALLKES 119 +D L + ++ R+ ++ IL+LGTG+G + ++LL E Sbjct: 103 IDVVLQYHSQHSLCHSSNGGNPDKKQLDSVVKPRNNIKSSNILELGTGSGCISISLLLEL 162 Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESV 178 P + DIS A+E+AKSNA+ + V++R + S+WF ++ + FD+IVSNPPYI Sbjct: 163 PNSQITATDISIDAIEVAKSNAIKHDVTDRLQIIHSNWFENIGKQKFDLIVSNPPYISIN 222 Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238 + +E +++P I+L DGL Y+ IA+ + L ++G +EIGY Q V +I Sbjct: 223 EKPEMAIETINYEPSIALFAEEDGLLSYKIIAENAKKFLKQNGKIILEIGYKQADQVSQI 282 Query: 239 FESRKLFLVNAFKDYGGNDRVL 260 F + N +D ++RV+ Sbjct: 283 FLDHGYVIDNIHQDLQSHNRVI 304 >gi|197301353|ref|ZP_03166434.1| hypothetical protein RUMLAC_00080 [Ruminococcus lactaris ATCC 29176] gi|197299510|gb|EDY34029.1| hypothetical protein RUMLAC_00080 [Ruminococcus lactaris ATCC 29176] Length = 306 Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 90/266 (33%), Positives = 137/266 (51%), Gaps = 13/266 (4%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L VTG+ ++PD ++ + +H + I G ++F + Sbjct: 37 DAWYLLEFVTGVDKAHYYMNPDRRMEQSVAQEYEKVVKLRTEHIPLQHITGVQEFMGLEF 96 Query: 66 TLSSDTFEPRPETELLVDSALAF----SLPRIEKRDVVRILDLGTGTGAVCLALL----K 117 +S D PR +TE+LV+ AL +P+ +++ VR+LDL TG+G + +++L K Sbjct: 97 QVSGDVLIPRQDTEVLVEEALKLLEQEKVPK--EKETVRMLDLCTGSGCILISILYYAAK 154 Query: 118 ESPFFKGVGVDISCKALEIAKSNA---VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174 E +G G DIS AL IA+ N NG + L+SD F V+G F +IVSNPPY Sbjct: 155 EKIQIQGTGADISEAALRIAEENLDLLEKNGNKGMAELLESDLFEQVDGTFGMIVSNPPY 214 Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234 I++ ++ L EVR DP ++LDG DGL YR I + +L K+G+ EIGY+Q Sbjct: 215 IKTSVISGLQEEVRLHDPFLALDGKEDGLFFYRKIIEESRAYLQKNGVLLFEIGYDQGEA 274 Query: 235 VVRIFESRKLFLVNAFKDYGGNDRVL 260 V + V KD G DR++ Sbjct: 275 VSELMTKEGYGQVVVKKDLAGLDRIV 300 >gi|34763569|ref|ZP_00144504.1| METHYLTRANSFERASE [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|27886758|gb|EAA23896.1| METHYLTRANSFERASE [Fusobacterium nucleatum subsp. vincentii ATCC 49256] Length = 370 Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 78/222 (35%), Positives = 129/222 (58%), Gaps = 7/222 (3%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101 ++R+ K + + ILG +FY + +S PR +TE+LV+ + + +E+ + I Sbjct: 131 VLRAKKRKPLQYILGEWEFYGLPFKVSEGVLIPRADTEILVEQCIQL-MREVEEPN---I 186 Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 LD+G+G+GA+ +A+ E G+DI+ KA+E+A N N + E + ++SD F + Sbjct: 187 LDIGSGSGAISIAIANELKSSSVTGIDINEKAIELANENKTLNKI-ENVNFIKSDLFEKI 245 Query: 162 EGLF--DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 + F D+IVSNPPYI + L EV++++P+ +L DGL YR I+ +L Sbjct: 246 DKDFKYDLIVSNPPYISKNEYETLMPEVKNYEPQNALTDLGDGLYFYREISKLAGEYLKD 305 Query: 220 DGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 G + EIGYNQ DV +I ++ +++ KDYGGNDRV++ Sbjct: 306 TGYLAYEIGYNQAKDVTKILQNNNFDILSVIKDYGGNDRVVI 347 >gi|162147701|ref|YP_001602162.1| HemK protein [Gluconacetobacter diazotrophicus PAl 5] gi|209542325|ref|YP_002274554.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Gluconacetobacter diazotrophicus PAl 5] gi|161786278|emb|CAP55860.1| putative hemK homolog protein [Gluconacetobacter diazotrophicus PAl 5] gi|209530002|gb|ACI49939.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Gluconacetobacter diazotrophicus PAl 5] Length = 293 Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 86/239 (35%), Positives = 122/239 (51%), Gaps = 5/239 (2%) Query: 28 SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALA 87 S +D + + R HE + I G F+++ L + T PR ++E LV++ LA Sbjct: 57 SAMDAAEHRSFVALVARRAAHEPMAYITGRAGFWSLDLETAPATLIPRADSETLVEALLA 116 Query: 88 FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147 R ++ V ILDLGTGTG + LA L E P G+GVDI A +A NA G+ Sbjct: 117 Q---RPDRGAVRTILDLGTGTGCLLLAALSEYPDAWGLGVDIDPDAAHLAARNARRTGLR 173 Query: 148 ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207 +R L +DW +++ G FDV+ SNPPYI + L +VRD +P +LDGG DGL YR Sbjct: 174 DRCAMLAADWSTAIAGRFDVVFSNPPYIPRADLAGLMPDVRDHEPARALDGGTDGLDAYR 233 Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF--CR 264 + + L G+ EIG Q+ + + L +V D GG R +L CR Sbjct: 234 LLTGALPSLLAHGGIAIFEIGIGQERSMPDLARQAGLDIVGIRTDLGGIPRAVLMQQCR 292 >gi|126462319|ref|YP_001043433.1| HemK family modification methylase [Rhodobacter sphaeroides ATCC 17029] gi|126103983|gb|ABN76661.1| modification methylase, HemK family [Rhodobacter sphaeroides ATCC 17029] Length = 278 Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 88/259 (33%), Positives = 131/259 (50%), Gaps = 8/259 (3%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 +A RD+ + + ++ + L A+ + + +I+G R F+ Sbjct: 21 EAARDARRLMAHAMAIDPARLTLHLPDPLPPEAAARFEAALAARAARQPVGQIVGERLFW 80 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 R ++ DT +PRPETE L+++ALA +LDLGTGTG + + LL E P Sbjct: 81 GRRFRVTRDTLDPRPETEGLIEAALAEPF--------ATVLDLGTGTGCIAVTLLAERPA 132 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181 G+ D+S AL +A NA G + R + SDWF++V D+I+SNPPYI + +D Sbjct: 133 AHGIATDLSPAALAVAAENAAALGAASRLELRLSDWFAAVPERVDLILSNPPYIAADEMD 192 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 L EVR ++P ++L G DGL YR IA G HL G +EIG Q V + E+ Sbjct: 193 TLAPEVRLWEPHLALSPGGDGLDAYRAIARGAPAHLRPGGRLLLEIGAAQGRAVAGLVEA 252 Query: 242 RKLFLVNAFKDYGGNDRVL 260 L V+ D G DR++ Sbjct: 253 AGLARVSVLPDLDGRDRLV 271 >gi|294010050|ref|YP_003543510.1| methylase of polypeptide chain release factors [Sphingobium japonicum UT26S] gi|292673380|dbj|BAI94898.1| methylase of polypeptide chain release factors [Sphingobium japonicum UT26S] Length = 275 Score = 139 bits (350), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 84/223 (37%), Positives = 123/223 (55%), Gaps = 14/223 (6%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101 I R L E I I G RDF+ + L ++ D PRP++E L+++AL PR RI Sbjct: 57 IQRRLTGEPIAYITGTRDFWTISLHVTPDVLIPRPDSETLIEAALDHFGPR----SPARI 112 Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 LDLGTG+GA+ LA L + P G GVDIS A+ +A+ NA G+ R + DW + Sbjct: 113 LDLGTGSGALLLAALSQWPQATGTGVDISPAAVAVAQGNADRLGLGGRANFRLGDWAEGM 172 Query: 162 EGLFDVIVSNPPYI---ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 G FD+I+ NPPYI ++ D L +P +L G +GL YR IA + R L Sbjct: 173 GGPFDLILVNPPYIARDAALAGDVL------HEPETALFAGAEGLDDYRRIAPALPRLLA 226 Query: 219 KDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 G+ ++EIG++Q++ V + + L V+ +D G+DR L+ Sbjct: 227 PGGMAAMEIGHDQRLSVSALLADQGLG-VSPRRDLAGHDRCLV 268 >gi|257870910|ref|ZP_05650563.1| modification methylase HemK [Enterococcus gallinarum EG2] gi|257805074|gb|EEV33896.1| modification methylase HemK [Enterococcus gallinarum EG2] Length = 278 Score = 139 bits (349), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 83/217 (38%), Positives = 118/217 (54%), Gaps = 8/217 (3%) Query: 46 LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLG 105 L H +LG+ +FY R ++ DT PRPETE LV A L + E + +R++D+G Sbjct: 65 LAHRPPQYLLGYEEFYGHRFKVTEDTLIPRPETEELV----ALCLEQTEPAENLRVVDIG 120 Query: 106 TGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGL 164 TGTGA+ ++L P ++ VD+S AL +AK NA G F Q D + V + Sbjct: 121 TGTGAIAVSLKLARPHWQIAAVDLSEAALAVAKENAAQLGAEVAF--YQGDTLTPVGDQS 178 Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224 +D+IVSNPPYI + + VR F+P+++L +GL YR IAD + L DG Sbjct: 179 WDIIVSNPPYISEQEWELMDASVRQFEPQMALFAAENGLVMYRKIADQAKKLLTPDGKIF 238 Query: 225 VEIGYNQKVDVVRIF-ESRKLFLVNAFKDYGGNDRVL 260 VEIG+ Q V RIF E+ V +D G DR++ Sbjct: 239 VEIGFQQGKSVQRIFAEAFPDKKVTVIQDLSGKDRLV 275 >gi|322517016|ref|ZP_08069905.1| protein-(glutamine-N5) methyltransferase [Streptococcus vestibularis ATCC 49124] gi|322124433|gb|EFX95930.1| protein-(glutamine-N5) methyltransferase [Streptococcus vestibularis ATCC 49124] Length = 277 Score = 139 bits (349), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 84/219 (38%), Positives = 124/219 (56%), Gaps = 14/219 (6%) Query: 48 HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTG 107 H+ ILG+ DF+ +R + PRPET+ LVD LA + P E ++ILD+GTG Sbjct: 65 HKPAQYILGYEDFHGLRFQVDERVLIPRPETKELVDLILAEN-PSSE----LKILDIGTG 119 Query: 108 TGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDV 167 +GA+ ++L K PF++ D+S AL +AK NA N V F +QSD F ++ G FD+ Sbjct: 120 SGAISVSLKKSCPFWQVTASDLSADALVLAKENAKLNQVDISF--VQSDVFENISGSFDI 177 Query: 168 IVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227 IVSNPPYI D +GL V +P+++L +GL+ YR I + +++L G EI Sbjct: 178 IVSNPPYISENDKDEVGLNVLTSEPKMALFADEEGLAIYRQIIEDATKYLTPKGKLYFEI 237 Query: 228 GYNQKVDVVRI----FESRKLFLVNAFKDYGGNDRVLLF 262 GY Q +D+ R+ F + V KD G DR+++ Sbjct: 238 GYKQGLDLKRLLSLHFPDKH---VRVLKDQFGQDRMVVM 273 >gi|58038520|ref|YP_190484.1| HemK family protein [Gluconobacter oxydans 621H] gi|58000934|gb|AAW59828.1| HemK family protein [Gluconobacter oxydans 621H] Length = 282 Score = 139 bits (349), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 93/260 (35%), Positives = 136/260 (52%), Gaps = 5/260 (1%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A R++ LC TG ++ D V + Q A+ R L+ E + I G F+ Sbjct: 24 ARREARLLLCWATG-RDLGGLLSLDGV-EPAQELRFAEALKRRLEREPLAFITGETGFWT 81 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L DT PR ++E L++ AL + P ++ + ILDLGTGTG + LA L E P Sbjct: 82 LDLETGRDTLIPRADSEALIE-ALLDACP--DRSAPLSILDLGTGTGCLLLAALSEYPQA 138 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182 +GVGVD+S +A +AK N+V G+ +R L W ++ G FDV++SNPPYIES + Sbjct: 139 RGVGVDLSPQAAALAKRNSVRTGLEKRSAFLAGSWADALTGRFDVVLSNPPYIESGDLAG 198 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 L EV ++P +LDGG DGL YR + + L + G +E+G Q V + + Sbjct: 199 LMPEVLQYEPARALDGGADGLDAYRILCAALPGLLVRGGYAILEMGIGQIDAVSALGTAS 258 Query: 243 KLFLVNAFKDYGGNDRVLLF 262 L V D GG +R L+ Sbjct: 259 GLRDVAHKADLGGIERALVL 278 >gi|229826187|ref|ZP_04452256.1| hypothetical protein GCWU000182_01559 [Abiotrophia defectiva ATCC 49176] gi|229789057|gb|EEP25171.1| hypothetical protein GCWU000182_01559 [Abiotrophia defectiva ATCC 49176] Length = 283 Score = 139 bits (349), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 88/262 (33%), Positives = 138/262 (52%), Gaps = 14/262 (5%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 +A D+ L +V+GL+ + + D +D+ + I R + + ++G RDF Sbjct: 26 EAELDARYILEKVSGLNRAEYFLHSDDKIDNDKTEEFLRLIERRSERIPLSYVIGTRDFM 85 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG--AVCLALLKES 119 + ++ + P ETELL + + + +LD+ TG+G A+ ++LL E Sbjct: 86 GLTFKVNENVLIPEQETELLAEEVIKHCKGKT-------VLDMCTGSGCIAISVSLLGEP 138 Query: 120 PFFKGVGVDISCKALEIAKSNA-VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESV 178 + DIS KALE+AK NA N + +F ++ D F ++ G FD+IVSNPPYIE+ Sbjct: 139 S--EVTASDISDKALEVAKENAEFLNASTVKF--IKGDLFENITGSFDIIVSNPPYIETR 194 Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238 +++ L EVRD+ PR++LDG DGL Y+ I ++LNK+ EIGYNQ V I Sbjct: 195 VIEELEPEVRDYIPRLALDGDEDGLKFYKNITKKAIKYLNKNARIFYEIGYNQSEAVTDI 254 Query: 239 FESRKLFLVNAFKDYGGNDRVL 260 + KDY G DR++ Sbjct: 255 LLENGFEEIKIIKDYSGLDRIV 276 >gi|262068282|ref|ZP_06027894.1| ribosomal protein L11 methyltransferase [Fusobacterium periodonticum ATCC 33693] gi|291378020|gb|EFE85538.1| ribosomal protein L11 methyltransferase [Fusobacterium periodonticum ATCC 33693] Length = 382 Score = 139 bits (349), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 79/222 (35%), Positives = 129/222 (58%), Gaps = 7/222 (3%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101 ++R+ + + ILG +FY + + + PRP+TE+LV+ + + IE+ + I Sbjct: 144 MLRAKSRKPLQYILGEWEFYGLPFKVRENVLIPRPDTEILVEQCIQL-MREIEEPN---I 199 Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 LD+G+G+GA+ +A+ E GVDI+ +A+++A N + N V E + ++SD F + Sbjct: 200 LDIGSGSGAISIAIANELKSSSVTGVDINEEAIKLANENKILNKV-ENINFMKSDLFEKL 258 Query: 162 EGLF--DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 + F D+IVSNPPYI + L EV++F+P+ +L DGL YR I+ +L + Sbjct: 259 DEDFKYDLIVSNPPYITKEEYESLMPEVKNFEPKNALTDLGDGLHFYREISKKAGSYLKE 318 Query: 220 DGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 G + EIGY Q DV +I E +++ KDYGGN+RV+L Sbjct: 319 SGYLAFEIGYKQAKDVSKILEDNGFAILSVVKDYGGNNRVVL 360 >gi|312863896|ref|ZP_07724134.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptococcus vestibularis F0396] gi|311101432|gb|EFQ59637.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptococcus vestibularis F0396] Length = 277 Score = 138 bits (348), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 84/219 (38%), Positives = 124/219 (56%), Gaps = 14/219 (6%) Query: 48 HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTG 107 H+ ILG+ DF+ +R + PRPET+ LVD LA + P E ++ILD+GTG Sbjct: 65 HKPAQYILGYEDFHGLRFQVDERVLIPRPETKELVDLILAEN-PSSE----LKILDIGTG 119 Query: 108 TGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDV 167 +GA+ ++L K PF++ D+S AL +AK NA N V F +QSD F ++ G FD+ Sbjct: 120 SGAISVSLKKSCPFWQVTASDLSADALVLAKENAKLNQVDISF--VQSDVFENISGSFDI 177 Query: 168 IVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227 IVSNPPYI D +GL V +P+++L +GL+ YR I + +++L G EI Sbjct: 178 IVSNPPYISENDKDEVGLNVLTSEPKMALFADEEGLAIYRQIIEDATKYLTPKGKLYFEI 237 Query: 228 GYNQKVDVVRI----FESRKLFLVNAFKDYGGNDRVLLF 262 GY Q +D+ R+ F + V KD G DR+++ Sbjct: 238 GYKQGLDLKRLLSLHFPDKH---VRILKDQFGQDRMVVM 273 >gi|322373125|ref|ZP_08047661.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptococcus sp. C150] gi|321278167|gb|EFX55236.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptococcus sp. C150] Length = 277 Score = 138 bits (348), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 85/229 (37%), Positives = 131/229 (57%), Gaps = 15/229 (6%) Query: 38 LTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR 96 L ++I LK H+ ILG+ DF+ +R + PRPETE LV+ LA + P+ E Sbjct: 54 LLSSIFNQLKAHKPAQYILGFEDFHGLRFQVDKRVLIPRPETEELVELILAEN-PKTE-- 110 Query: 97 DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 +++LD+GTG+GA+ ++L + P ++ D+S ALE+A+ NA N V F +QSD Sbjct: 111 --LKVLDIGTGSGAIAVSLKESCPLWQVTASDLSVDALELARENAKLNRVDISF--IQSD 166 Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216 F ++ G FD+IVSNPPYI + +GL V +P+++L DGL+ YR I + ++H Sbjct: 167 VFENISGSFDIIVSNPPYISENDKNEVGLNVLTSEPKLALFADEDGLAIYRQIIERAAKH 226 Query: 217 LNKDGLCSVEIGYNQKVDVVRI----FESRKLFLVNAFKDYGGNDRVLL 261 L+ G EIGY Q D+ ++ F + V KD G DR+++ Sbjct: 227 LSPQGKLYFEIGYKQGSDLKKLLSLHFPDK---CVRVLKDQFGQDRMVV 272 >gi|254515299|ref|ZP_05127360.1| protein-(glutamine-N5) methyltransferase, release factor-specific [gamma proteobacterium NOR5-3] gi|219677542|gb|EED33907.1| protein-(glutamine-N5) methyltransferase, release factor-specific [gamma proteobacterium NOR5-3] Length = 278 Score = 138 bits (348), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 84/206 (40%), Positives = 116/206 (56%), Gaps = 7/206 (3%) Query: 54 ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113 +LG RDF+ + LT++ T PRP+TELLV+ ALA LP + +LDLGTG+GA+ L Sbjct: 70 LLGTRDFWTLSLTVNEATLIPRPDTELLVEQALALELP-----ESATVLDLGTGSGAIAL 124 Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173 AL E P ++ +GV+ S +AL +A NA G+ + L SDWFS V G FD+IVSNPP Sbjct: 125 ALATERPQWRVLGVERSPEALAVAIDNARQLGL-DSVQWLSSDWFSQVVGRFDLIVSNPP 183 Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233 YI ++R F+PR +L G DGL R I HL G +E G+ Q Sbjct: 184 YIADQDAHLATGDLR-FEPRSALASGSDGLDDIRKIIARSPDHLEPGGHLLLEHGFEQAP 242 Query: 234 DVVRIFESRKLFLVNAFKDYGGNDRV 259 V + + V ++ D G++RV Sbjct: 243 AVRALLTATGFANVASYDDLAGHERV 268 >gi|261867617|ref|YP_003255539.1| protein-(glutamine-N5) methyltransferase [Aggregatibacter actinomycetemcomitans D11S-1] gi|261412949|gb|ACX82320.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Aggregatibacter actinomycetemcomitans D11S-1] Length = 299 Score = 138 bits (347), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 94/270 (34%), Positives = 148/270 (54%), Gaps = 15/270 (5%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L VT S ++ ++ LD++ LT + R L+ E I ILG ++F+++ L Sbjct: 26 DAQVLLQFVTQKSRAFILAFGETALDEKTLEKLTALLARRLQGEPIAYILGEKEFWSLPL 85 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEK----RDVVRILDLGTGTGAVCLALL----- 116 +S+ T PRP+TE+LV+ A+A ++ +++K RILDLGTGTGA+ LAL Sbjct: 86 NVSAGTLIPRPDTEILVEKAVAIAIEKLQKCGQNSQRFRILDLGTGTGAIALALASALKP 145 Query: 117 ---KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173 K + +GVD++ + + +AKSN N ++ F +QS WF +V G FD+I+SNPP Sbjct: 146 IAQKHTVQLDIIGVDLTPEVVALAKSNGEKNQLNVAF--VQSCWFENVTGTFDLILSNPP 203 Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233 YI++ +VR F+P +L +G + R I + + ++G VE G+ Q Sbjct: 204 YIDAHDEHLTQGDVR-FEPLSALVAAEEGYADLRHIIANAPKFMRENGYLLVEHGWQQGE 262 Query: 234 DVVRIFESRKLFLVNAFKDYGGNDRVLLFC 263 V IF+ V +DYG N+RV L C Sbjct: 263 KVRSIFQENFWSAVETLRDYGNNERVTLGC 292 >gi|258645289|ref|ZP_05732758.1| protein-(glutamine-N5) methyltransferase [Dialister invisus DSM 15470] gi|260402639|gb|EEW96186.1| protein-(glutamine-N5) methyltransferase [Dialister invisus DSM 15470] Length = 288 Score = 138 bits (347), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 85/262 (32%), Positives = 137/262 (52%), Gaps = 9/262 (3%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 DS L V G S + + + +L ++ I + ++ S I+G ++F + L Sbjct: 31 DSEILLSHVLGKSRIYLYTEFERILAAKELALFKKYIQKRIEGFSAAAIIGKKEFMGLTL 90 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 ++ PRP+TE ++ + + +++ DLGTG+GA+ + L GV Sbjct: 91 KVNEQVLIPRPDTETWLEKVIQY----YRNETGLKVADLGTGSGAILVGFLYYCRDAVGV 146 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVDCL 183 GVDIS +AL+IA+ N +++R + Q D+ + E +FD I SNPPYI + + L Sbjct: 147 GVDISTEALKIAEENGQNLKLTDRVEWRQGDYLKAFDEEDIFDGIFSNPPYIPTKDIGGL 206 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF-ESR 242 EV+ +PR++LDGG DGL Y +A G + HL G +VE G Q D++ +F +S Sbjct: 207 PGEVKH-EPRLALDGGTDGLYFYHLLAKGAAEHLKPGGFLAVEFGIGQATDILEMFRKSA 265 Query: 243 KLFLVNAFKDYGGNDRVLLFCR 264 + KDYGG +R L+CR Sbjct: 266 QYEDFEVIKDYGGIERA-LYCR 286 >gi|312865012|ref|ZP_07725240.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptococcus downei F0415] gi|311099123|gb|EFQ57339.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptococcus downei F0415] Length = 276 Score = 138 bits (347), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 85/221 (38%), Positives = 123/221 (55%), Gaps = 12/221 (5%) Query: 44 RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103 R L HE ILG+ F++++L + PRPET LVD LA + + + +LD Sbjct: 61 RLLAHEPAQYILGYETFHDLKLKVDKRILIPRPETAELVDLILAEN-----ADEQLDLLD 115 Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG 163 +GTG+GA+ LAL E P ++ V DIS +AL++AK NA N ++ D QSD FS + Sbjct: 116 IGTGSGAIALALAHERPTWRIVASDISQEALDLAKENAQANQIA--VDFCQSDLFSQLSV 173 Query: 164 LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223 +D+IVSNPPYI +GL V +P ++L +GL+ YR +A +HL DG Sbjct: 174 SYDIIVSNPPYISEADKAEVGLNVLTSEPHLALFADEEGLAIYRKLAQQAGKHLKADGKI 233 Query: 224 SVEIGYNQKVDVVRIFESRKLF---LVNAFKDYGGNDRVLL 261 +EIGY Q V ++F R+ F V D G DR+++ Sbjct: 234 YLEIGYKQGQIVSQLF--REAFPDKRVRVLPDQFGQDRMVV 272 >gi|254302819|ref|ZP_04970177.1| polypeptide chain release factor methyltransferase HemK [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148323011|gb|EDK88261.1| polypeptide chain release factor methyltransferase HemK [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 383 Score = 138 bits (347), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 79/224 (35%), Positives = 127/224 (56%), Gaps = 11/224 (4%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR- 100 ++R+ K + + ILG +FY + +S PR +TE+LV+ + RD+ Sbjct: 144 VLRAKKRKPLQYILGEWEFYGLPFKVSEGVLIPRADTEILVEQCIQLM------RDIEEP 197 Query: 101 -ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ILD+GTG+GA+ +A+ E G+DI+ KAL++A N + N + E + ++S+ F Sbjct: 198 NILDIGTGSGAISIAIANELKSSSVTGIDINEKALKLANENKILNKI-ENVNFIESNLFE 256 Query: 160 SVEGLF--DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217 ++ F D+IVSNPPYI + L EV++++P+ +L DGL YR I+ +L Sbjct: 257 KLDKDFKYDLIVSNPPYISKEEYEILMPEVKNYEPQNALTDLGDGLYFYREISKLAGEYL 316 Query: 218 NKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 G + EIGYNQ DV +I + +++ KDYGGNDRV++ Sbjct: 317 KDTGYLAYEIGYNQAKDVSKILQDNNFAILSIVKDYGGNDRVII 360 >gi|226329847|ref|ZP_03805365.1| hypothetical protein PROPEN_03759 [Proteus penneri ATCC 35198] gi|225200642|gb|EEG82996.1| hypothetical protein PROPEN_03759 [Proteus penneri ATCC 35198] Length = 282 Score = 137 bits (346), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 88/256 (34%), Positives = 139/256 (54%), Gaps = 8/256 (3%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 RD+ L VT + ++ +++L + L+ + R +K E I ++G R+F+++ Sbjct: 22 RDAEILLGHVTQRARTYLMAFNETLLSQDELTQLSQLLTRRIKGEPIAYLVGEREFWSLP 81 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L +S T PRP+TE LV+ AL LP + + ILDLGTGTGA+ LA+ E P Sbjct: 82 LKVSPATLIPRPDTECLVEQALE-KLP----TEPITILDLGTGTGAIALAMASERPDCHI 136 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCL 183 +GVD +A+ +A+ NA ++ + ++S WFSS+ G F +I+SNPPYI+ Sbjct: 137 IGVDFQAEAVALAQENATRLALNNT-EFMESCWFSSLSGYQFGMIISNPPYIDENDEHIH 195 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 +VR F+P +L G +G + I + + L G +E G+ Q V +IF + Sbjct: 196 QGDVR-FEPLTALVAGNNGFADIEIIIETARQFLTDKGWVLLEHGWQQGEGVRKIFTDKG 254 Query: 244 LFLVNAFKDYGGNDRV 259 V F+DYGGN+RV Sbjct: 255 YCCVETFRDYGGNERV 270 >gi|189424096|ref|YP_001951273.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Geobacter lovleyi SZ] gi|189420355|gb|ACD94753.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Geobacter lovleyi SZ] Length = 286 Score = 137 bits (346), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 90/260 (34%), Positives = 131/260 (50%), Gaps = 11/260 (4%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A R++ LC TGL + ++ D L D + + + R K E + ILG ++F Sbjct: 29 ARREAEWLLCEATGLDRMGLYLNFDKPLQDDELAAYRSMVARRGKREPLQHILGSQEFDG 88 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR-ILDLGTGTGAVCLALLKESPF 121 + ++ D PR +TE L++ A + + R +LD+GTG+G + ++L P Sbjct: 89 LEFIVTRDVLIPRFDTETLLEEA-------VRQAPTARTVLDIGTGSGCIAISLFHRLPQ 141 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIV 180 VD+S AL IA+ NA N F L +F V E FD+IVSNPPYI S + Sbjct: 142 AAITAVDLSPDALSIARRNAERNNAQIEF--LLGSFFQPVSERRFDLIVSNPPYITSADL 199 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 L EVRDF+PR++LDGG DGL YR +A R+L +G +EIG Q DV + Sbjct: 200 ADLQPEVRDFEPRLALDGGTDGLDAYRVLAAEAPRYLEPNGWLLLEIGAGQDKDVATLLA 259 Query: 241 SRKLFLVNAFKDYGGNDRVL 260 + + D G RV+ Sbjct: 260 DAGFDAIVSVPDNAGIIRVV 279 >gi|50085502|ref|YP_047012.1| methyl transferase [Acinetobacter sp. ADP1] gi|49531478|emb|CAG69190.1| methyl transferase [Acinetobacter sp. ADP1] Length = 274 Score = 137 bits (346), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 87/259 (33%), Positives = 140/259 (54%), Gaps = 12/259 (4%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 +++ L + L+S ++ + +L Q + ++R K E + I G + F+++ Sbjct: 19 QEAMWLLEHILELNSLELKMRQMQILTQEQEQQYLDGLMRLSKGEPLAYITGSQPFWSLD 78 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L ++ DT PRP+TE+L+++ L+ LP + ++DLGTGTGA+ L+L KE P++K Sbjct: 79 LNVTPDTLVPRPDTEILIETVLSLDLP-----EHCSMVDLGTGTGAIALSLAKERPYWKI 133 Query: 125 VGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDC 182 + DI LE+A+SNA + +++ +F L S WF ++ FD+IVSNPPYI++ Sbjct: 134 LATDIYFPTLEVAQSNAKKHALNQVKF--LCSAWFEAIPSQKFDLIVSNPPYIDANDEHM 191 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 L L +PR +L GL+ I LN G +VE GY+Q V ++ Sbjct: 192 LNLGT---EPRRALVADKHGLADLEQIIGQAVLWLNTHGWIAVEHGYDQGQAVCQLLMDH 248 Query: 243 KLFLVNAFKDYGGNDRVLL 261 V KDYGGNDR+ L Sbjct: 249 NFAKVQTCKDYGGNDRISL 267 >gi|153854178|ref|ZP_01995486.1| hypothetical protein DORLON_01477 [Dorea longicatena DSM 13814] gi|149753227|gb|EDM63158.1| hypothetical protein DORLON_01477 [Dorea longicatena DSM 13814] Length = 287 Score = 137 bits (346), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 89/264 (33%), Positives = 137/264 (51%), Gaps = 12/264 (4%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 +A D+ L TG+S + DPD +++ + I + + I G ++F Sbjct: 26 EAKLDAWYLLEYKTGISRAVFLADPDREVEEEKAESYQKDICTRARRIPLQHITGEQEFM 85 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK---- 117 + ++ + PR +TE+LV+ AL P ++ ILD+ TG+G + ++LK Sbjct: 86 GLNFKVNENVLVPRQDTEILVEEALKRIRPDMQ------ILDMCTGSGCILESILKFGEK 139 Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIES 177 + KG G DIS +AL++A+ N G RF ++SD F SV +D+IVSNPPYI + Sbjct: 140 KQMHLKGTGCDISEEALKVARENNSRLGTDARF--IKSDLFESVTEKYDMIVSNPPYIRT 197 Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237 + L EV+ DP I+LDG DGL YR I R+LNK G EIG++Q DV Sbjct: 198 EEISRLDEEVKLHDPWIALDGKEDGLYFYRLIVKDSIRYLNKGGYILFEIGFDQGKDVSE 257 Query: 238 IFESRKLFLVNAFKDYGGNDRVLL 261 + ++ + KD G DRV++ Sbjct: 258 LLKNEGYEEIEIKKDLAGLDRVVM 281 >gi|323143930|ref|ZP_08078588.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Succinatimonas hippei YIT 12066] gi|322416294|gb|EFY06970.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Succinatimonas hippei YIT 12066] Length = 273 Score = 137 bits (345), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 90/255 (35%), Positives = 131/255 (51%), Gaps = 13/255 (5%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L V +I + L +R + I R + E I ILG+++F+ + Sbjct: 25 DADLLLMEVLHCPRSYLITHDNEELKERAIVRFRDLISRRSRGEPIAYILGYKEFWGLPF 84 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 ++ + PRP+TELLV++AL F + V +LDLGTG+GA+ L++ E P + Sbjct: 85 KVNRNVLIPRPDTELLVETALKF-------KQVKSVLDLGTGSGAIILSIKYERPDINAL 137 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLG 184 DIS AL++AK NA++ G+ F +S WFS ++ FD+IVSNPPYIE + Sbjct: 138 ACDISDAALQVAKENALSLGLDVTF--FKSSWFSDIKNAKFDLIVSNPPYIEE---NDEH 192 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 L+ F+P +L G DGL R IA N G +E GYNQ DV I E Sbjct: 193 LKALSFEPVGALISGKDGLDDIRIIAKDSRHFFNPGGALLLEHGYNQGKDVRNILEECGF 252 Query: 245 FLVNAFKDYGGNDRV 259 + +D G N+RV Sbjct: 253 NEIKTLRDLGSNERV 267 >gi|227510127|ref|ZP_03940176.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227190332|gb|EEI70399.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 288 Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 85/246 (34%), Positives = 136/246 (55%), Gaps = 5/246 (2%) Query: 16 GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75 G S+ +++ + Q N + R + E + I+G DFY + L + S+ PR Sbjct: 40 GFSTTDMLIHYHDRMSSGQWLQFQNDVKRLISGEPVQYIVGQADFYGLTLNVDSNVLIPR 99 Query: 76 PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135 ETE LVD L + +++LD+GTG+GA+ +AL P ++ DIS AL+ Sbjct: 100 VETEELVDWIL--DQTTVYTNRPLKVLDIGTGSGAIAIALKANRPEWQVNASDISDSALK 157 Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195 +A+ NA + V+ F + SD F+ + FD+IVSNPPYI + V + V++ +P+I+ Sbjct: 158 VAQQNAQLHHVAINF--ILSDIFAHINEAFDLIVSNPPYISASEVGDMDSSVKNNEPKIA 215 Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF-ESRKLFLVNAFKDYG 254 L DGL+ Y+++A GV HLN G VEIG++Q+ V +IF E+ +V A D Sbjct: 216 LFAADDGLAIYKSLAKGVDAHLNAGGQLFVEIGFHQEASVRKIFQEALPNAIVTAKHDVS 275 Query: 255 GNDRVL 260 G+ R++ Sbjct: 276 GHQRMV 281 >gi|158321601|ref|YP_001514108.1| HemK family modification methylase [Alkaliphilus oremlandii OhILAs] gi|158141800|gb|ABW20112.1| modification methylase, HemK family [Alkaliphilus oremlandii OhILAs] Length = 289 Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 84/263 (31%), Positives = 130/263 (49%), Gaps = 10/263 (3%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L V + + + P+ + + + + H + I+ ++F + Sbjct: 26 DAEVLLYNVLKVDRLHLHMYPEKEISKEEEALFWTYMAQRKNHMPVQYIIKKQEFMGLDF 85 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK--ESPFFK 123 + PR +TE+LV+ A+ + E + V RI+D+GTG+GA+ ++L K E+ Sbjct: 86 FVEEGVLIPRGDTEILVEKAIEIYKEKFEPQKV-RIMDIGTGSGAIVVSLAKFIENSIL- 143 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-----FDVIVSNPPYIESV 178 +DIS KA E+AK NA +GV + F ++ G +D IVSNPPYI Sbjct: 144 -TAIDISPKAFEVAKKNAAHHGVDHKIAFYLGSLFEALYGKDEHKEYDFIVSNPPYIPKA 202 Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238 +VD L V+D++P ++LDGG DGL YR I G +L G EIGY+Q V + Sbjct: 203 VVDTLDAGVKDYEPHLALDGGADGLDFYREITLGAKEYLKSGGWLLFEIGYDQGESVSEL 262 Query: 239 FESRKLFLVNAFKDYGGNDRVLL 261 + L V KD G DRV+L Sbjct: 263 LIANDLKEVQVRKDLAGLDRVVL 285 >gi|228477567|ref|ZP_04062200.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptococcus salivarius SK126] gi|228250711|gb|EEK09909.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptococcus salivarius SK126] Length = 277 Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 82/230 (35%), Positives = 128/230 (55%), Gaps = 14/230 (6%) Query: 37 FLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR 96 L +A + KH+ ILG+ DF+ +R + PRPETE LVD LA + P E Sbjct: 54 LLAHAFSQLKKHKPAQYILGYEDFHGLRFQVDERVLIPRPETEELVDLILAEN-PSTE-- 110 Query: 97 DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 +++LD+GTG+GA+ ++L K P ++ D+S A+E+A+ NA N V+ F +QSD Sbjct: 111 --LKVLDIGTGSGAISVSLKKSRPLWQVTASDLSVDAIELAQENAKLNQVAISF--VQSD 166 Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216 F ++ G FD+IVSNPPYI + +G+ V +P+++L +GL+ YR I + ++ Sbjct: 167 VFENISGSFDIIVSNPPYISENDKNEVGINVLASEPKMALFADEEGLAIYRQIIEEADKY 226 Query: 217 LNKDGLCSVEIGYNQKVDVVRI----FESRKLFLVNAFKDYGGNDRVLLF 262 L G EIGY Q D+ + F ++ V KD G DR+++ Sbjct: 227 LTPSGKLYFEIGYKQGQDLKGLLSLHFPDKR---VRVLKDQFGQDRMVVM 273 >gi|296533065|ref|ZP_06895709.1| protein-(glutamine-N5) methyltransferase [Roseomonas cervicalis ATCC 49957] gi|296266609|gb|EFH12590.1| protein-(glutamine-N5) methyltransferase [Roseomonas cervicalis ATCC 49957] Length = 287 Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 93/261 (35%), Positives = 136/261 (52%), Gaps = 11/261 (4%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVL--DDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63 ++ L S ++ +P + + D RF + R L HE + +LG + F+ + Sbjct: 33 EARLLLAEAMATSQEALLREPRAAVAPDAASRF--AALLQRRLAHEPMAYLLGRQGFWTL 90 Query: 64 RLTLSSDTFEPRPETELLVDSAL-AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 L +S DT PR ++E +V++AL FS P R+LDLGTGTG + LA+L E Sbjct: 91 ELEVSRDTLIPRADSEAIVEAALEVFSGPG------GRVLDLGTGTGCLLLAVLAERAGA 144 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182 GVGVD+S A +A NA +G++ R L DW +++ G FD+++SNPPYIES +V Sbjct: 145 FGVGVDLSPGAAALAARNAARSGLAGRAAFLAGDWDAALAGRFDLVLSNPPYIESAVVPG 204 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 L EV +P +LDGG DGL YR I + R L G +E+G Q V + + Sbjct: 205 LMPEVAGHEPARALDGGADGLDAYRVIVAALPRLLAPGGHAVLELGQGQAPAVSALAAAA 264 Query: 243 KLFLVNAFKDYGGNDRVLLFC 263 L D GG +R L+ Sbjct: 265 GLASRGLRADLGGVERALVLA 285 >gi|90581728|ref|ZP_01237515.1| putative HemK protein, Methylase of polypeptide chain release factors [Vibrio angustum S14] gi|90437082|gb|EAS62286.1| putative HemK protein, Methylase of polypeptide chain release factors [Vibrio angustum S14] Length = 284 Score = 136 bits (343), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 89/261 (34%), Positives = 137/261 (52%), Gaps = 11/261 (4%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 DS LC V ++ P+ LDD Q + R L E I I+G R+F+++ L Sbjct: 27 DSAVLLCHVLDKPRSYLLTWPEKQLDDEQYNIFQQLLARRLNGEPIAYIVGEREFWSLPL 86 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 +S T PRP+TE LV+ +L +I ++LDLGTGTGA+ LA+ E P + Sbjct: 87 KVSPSTLIPRPDTERLVE----LALDKITSA-TTKVLDLGTGTGAIALAIASECPSVQVT 141 Query: 126 GVDISCKALEIAKSNAVTNGV-SERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDC 182 G+D+ +A E+A N+ + + RF L W+S ++ +F++IVSNPPYI+ Sbjct: 142 GIDLRQEAAELAHENSQRLSILNTRF--LAGSWYSPLQNNDVFELIVSNPPYIDHADPHL 199 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 + +VR F+P+ +L +GL+ R I+ +HL G +E G+ Q + V I E Sbjct: 200 VQGDVR-FEPKSALVADDNGLADIRIISAQGRKHLTVGGWLLMEHGFEQGLAVRTILEQL 258 Query: 243 KLFLVNAFKDYGGNDRVLLFC 263 V+ +DY G DRV + C Sbjct: 259 GYQQVSTSQDYAGLDRVTMGC 279 >gi|256845603|ref|ZP_05551061.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Fusobacterium sp. 3_1_36A2] gi|256719162|gb|EEU32717.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Fusobacterium sp. 3_1_36A2] Length = 383 Score = 136 bits (343), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 76/222 (34%), Positives = 128/222 (57%), Gaps = 7/222 (3%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101 ++R+ K + + ILG +FY + +S PR +TE+LV+ + + +E+ + I Sbjct: 144 VLRAKKRKPLQYILGEWEFYGLPFKVSEGVLIPRADTEILVEQCIQL-MREVEEPN---I 199 Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 LD+G+G+GA+ +A+ E G+DI+ KA+E+A N N + E + ++SD F + Sbjct: 200 LDIGSGSGAISIAIANELKSSSVTGIDINEKAIELANENKTLNKI-ENVNFIKSDLFEKI 258 Query: 162 EGLF--DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 + F D+IVSNPPYI + L EV++++P+ +L DGL YR ++ +L Sbjct: 259 DKDFKYDLIVSNPPYISKNEYETLMSEVKNYEPQNALTDLGDGLYFYREMSKLAGEYLKD 318 Query: 220 DGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 + EIGYNQ DV +I ++ +++ KDYGGNDRV++ Sbjct: 319 TAYLAYEIGYNQAKDVTKILQNNNFDILSVIKDYGGNDRVVI 360 >gi|206891037|ref|YP_002248217.1| HemK family protein [Thermodesulfovibrio yellowstonii DSM 11347] gi|206742975|gb|ACI22032.1| HemK family protein [Thermodesulfovibrio yellowstonii DSM 11347] Length = 279 Score = 136 bits (343), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 83/267 (31%), Positives = 139/267 (52%), Gaps = 15/267 (5%) Query: 4 LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63 +R++ +C V + Q+ + + + Q + + I R LK E + I+G FYN+ Sbjct: 18 IREAQEIICHVLKIDKIQLYTENPEITSE-QAHTIKSLIERRLKKEPLQYIIGECYFYNI 76 Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV-----RILDLGTGTGAVCLALLKE 118 ++ + PRPETE+LV+ L E++ ++ RILDL TG+G + LA+ K Sbjct: 77 KIKVGRGVLIPRPETEILVEQVL-------ERQKLISNTGNRILDLCTGSGCIALAIGKN 129 Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIES 177 +P F+ G+D S KA++ A N N + L D F+ E +F I +NPPY+++ Sbjct: 130 APEFQIFGIDKSEKAVKYATENKALNNIKNVI-FLVGDMFNPFKEKIFACITANPPYVKT 188 Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237 + L E+++++P +L+GG DGL+ YR I + ++L GL +EIG Q V Sbjct: 189 DEISKLQPEIKNYEPLEALNGGEDGLNFYRKIIENAEKYLLNSGLIFLEIGQGQAKAVQN 248 Query: 238 IFESRKLFLVNAFKDYGGNDRVLLFCR 264 I ++ KD G DRV++ + Sbjct: 249 IALMSGFNVIEVVKDIAGIDRVMILQK 275 >gi|330445231|ref|ZP_08308883.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328489422|dbj|GAA03380.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 284 Score = 136 bits (343), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 89/261 (34%), Positives = 135/261 (51%), Gaps = 11/261 (4%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 DS LC V ++ P+ LDD Q + R + E + I+G R+F+++ L Sbjct: 27 DSAVLLCHVLDKPRSYLLTWPEKQLDDAQYEAFQALLTRRINGEPVAYIIGEREFWSLSL 86 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 +S T PRP+TE LV+ +L +I ++LDLGTGTGA+ LA+ E P + Sbjct: 87 KVSPSTLIPRPDTERLVE----LALEKISA-SATKVLDLGTGTGAIALAIASECPMLQVT 141 Query: 126 GVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDC 182 G+D+ +A ++A N+ +S RF L W+S ++ FDVIVSNPPYI+ Sbjct: 142 GIDLRQEAADLALENSQRLSISNTRF--LAGSWYSPLQQNETFDVIVSNPPYIDEADPHL 199 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 + +VR F+P+ +L +GL+ R I+D +HL G +E G+ Q V I Sbjct: 200 VQGDVR-FEPKSALVADDNGLADIRIISDQGRQHLAIGGWLLMEHGFEQGSAVREILAQL 258 Query: 243 KLFLVNAFKDYGGNDRVLLFC 263 V+ +DY G DRV + C Sbjct: 259 GYQQVSTSQDYAGLDRVTMGC 279 >gi|238917366|ref|YP_002930883.1| HemK protein [Eubacterium eligens ATCC 27750] gi|238872726|gb|ACR72436.1| HemK protein [Eubacterium eligens ATCC 27750] Length = 279 Score = 136 bits (343), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 89/262 (33%), Positives = 130/262 (49%), Gaps = 9/262 (3%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 A DS L + G++ +++ DS+L + I + H + ILG FY Sbjct: 22 NAEHDSFELLSAINGMTRTFYLINGDSLLSEENFLMFEEYIEQRASHIPLQHILGKTWFY 81 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 ++SD PR +TE+LV + + R ILD+ TG+G + + L K+ P Sbjct: 82 GYEYMVNSDVLIPRQDTEILVGEVIKVT------RSGDYILDMCTGSGCIGITLAKKFPE 135 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVI 179 + +GVD+S KAL +A+SN N +E D ++SD F + F+ IVSNPPYI + + Sbjct: 136 CRVLGVDVSEKALNVAQSNK-HNLEAENIDFMRSDLFEELNHDITFNTIVSNPPYIPTKV 194 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 ++ L EVR DP ++LDG DGL YR I L DG EIG Q DV I Sbjct: 195 IEGLQEEVRLHDPILALDGMEDGLMFYRKITAQAGDFLETDGYLCYEIGAEQAADVSDIM 254 Query: 240 ESRKLFLVNAFKDYGGNDRVLL 261 + + KD G DRV++ Sbjct: 255 KKAGFKDITVVKDLAGFDRVVM 276 >gi|323698088|ref|ZP_08110000.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Desulfovibrio sp. ND132] gi|323458020|gb|EGB13885.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Desulfovibrio desulfuricans ND132] Length = 283 Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 88/248 (35%), Positives = 127/248 (51%), Gaps = 7/248 (2%) Query: 16 GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75 G S + +D VL D + + + R E + ILG R+FY + +S PR Sbjct: 35 GCSRPALNLDRGRVLTDEELAAVETLVARREAGEPVAYILGNREFYGLDFAVSPAVLIPR 94 Query: 76 PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135 PETE +V++ R K R DLGTG+G + + + P +GV VDIS AL+ Sbjct: 95 PETEHIVEAVEE----RFSKDQPFRFADLGTGSGILAVTIAVLFPQARGVAVDISPDALD 150 Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194 +A++NA T+ V++R D LQ+D+ S EG +D++VSNPPY+ + EV F+P Sbjct: 151 VARANARTHNVADRLDFLQADFTSQTPEGPYDLVVSNPPYVTEAEFEAASREVTGFEPTG 210 Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF--ESRKLFLVNAFKD 252 +L G DGL H R + V+ L G +EIG+ Q V+ I E V KD Sbjct: 211 ALVSGPDGLDHIRAMLPRVADMLRPGGWMFMEIGWEQGCAVMNILAGEYPSFEAVGVRKD 270 Query: 253 YGGNDRVL 260 G DRV+ Sbjct: 271 LAGLDRVV 278 >gi|89073092|ref|ZP_01159631.1| putative HemK protein, Methylase of polypeptide chain release factors [Photobacterium sp. SKA34] gi|89051045|gb|EAR56502.1| putative HemK protein, Methylase of polypeptide chain release factors [Photobacterium sp. SKA34] Length = 284 Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 89/261 (34%), Positives = 137/261 (52%), Gaps = 11/261 (4%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 DS LC V ++ P+ LDD Q + R L E I I+G R+F+++ L Sbjct: 27 DSAVLLCHVLDKPRSYLLTWPEKQLDDEQYNIFQQVLARRLNGEPIAYIVGEREFWSLPL 86 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 +S T PRP+TE LV+ +L +I ++LDLGTGTGA+ LA+ E P + Sbjct: 87 KVSPSTLIPRPDTERLVE----LALDKITSA-TSKVLDLGTGTGAIALAIASEYPSLQVT 141 Query: 126 GVDISCKALEIAKSNAVTNGV-SERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDC 182 G+D+ +A E+A N+ + + RF L W+S ++ +F++IVSNPPYI+ Sbjct: 142 GIDLRQEAAELAHENSQRLSILNTRF--LAGSWYSPLQHNDVFELIVSNPPYIDHADPHL 199 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 + +VR F+P+ +L +GL+ R I+ +HL G +E G+ Q + V I E Sbjct: 200 VQGDVR-FEPKSALVADDNGLADIRIISAQGRKHLTVGGWLLMEHGFEQGLAVRTILEQL 258 Query: 243 KLFLVNAFKDYGGNDRVLLFC 263 V+ +DY G DRV + C Sbjct: 259 GYQQVSTSQDYAGLDRVTMGC 279 >gi|167627297|ref|YP_001677797.1| HemK family modification methylase [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|167597298|gb|ABZ87296.1| modification methylase, HemK family [Francisella philomiragia subsp. philomiragia ATCC 25017] Length = 285 Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 87/258 (33%), Positives = 138/258 (53%), Gaps = 12/258 (4%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 D +C V G+ + ++ D LD+ + I+R L E + ILG++ F+N + Sbjct: 26 HDLQMIICDVLGVDKTYLYLNSDKHLDNAILTKINGKILRLLAGEPLAYILGYKYFWNQK 85 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALLKESPFFK 123 L ++ DT PR +TE +V A L I+ ++ ++ILDLGTG+GA+ LAL +E P + Sbjct: 86 LYVTKDTLIPRADTEAVV----AAVLDDIQDKNAQLKILDLGTGSGAIALALAEELPKSQ 141 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDC 182 V VD+ K L++AK NA+ N + + +QS W+ +++ FD+IVSNPPYI+ VD Sbjct: 142 VVAVDLYSKTLDVAKKNALANKIV-NVEFMQSSWYENLDATKFDIIVSNPPYID---VDD 197 Query: 183 LGLE--VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 ++ VR+ +P +L +GL+ R I S L + G +E G+ Q D+ IF Sbjct: 198 ANIDDSVREHEPSKALFAADNGLADIRIIISQASGFLKQGGYLYIEHGFTQANDIANIFS 257 Query: 241 SRKLFLVNAFKDYGGNDR 258 + KD DR Sbjct: 258 HYSFGDIQTIKDLNHKDR 275 >gi|302342175|ref|YP_003806704.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Desulfarculus baarsii DSM 2075] gi|301638788|gb|ADK84110.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Desulfarculus baarsii DSM 2075] Length = 291 Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 88/255 (34%), Positives = 128/255 (50%), Gaps = 8/255 (3%) Query: 10 FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69 L +V GL + +D D L + ++R HE + I G R+F+ + L + Sbjct: 33 LLSQVLGLERIGLYLDFDRPLTKDELAGFKALLLRRRAHEPVAYIRGKREFFGLELAVGP 92 Query: 70 DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129 PRPETELLV+ +A + + + +ILDL TG GAV LAL + P + + DI Sbjct: 93 GVLIPRPETELLVERGVAL----LAQAERPKILDLCTGGGAVALALASQLPTARVLACDI 148 Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVIVDCLGLE 186 S +AL A+ NA G+ ER LQ + V G FD+I +NPPY+ S CL + Sbjct: 149 SAQALAYARQNAQALGLEERVSFLQGPLWEPVAATGGFFDLITANPPYVTSGEWPCLPPD 208 Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF- 245 VRD +PR++L+ G +GL I G L VEIG Q V+ + ++ +F Sbjct: 209 VRDHEPRLALEAGPEGLDVIGPIIVGSRAFLRPLAWLLVEIGAGQGPAVMALAQAAGIFS 268 Query: 246 LVNAFKDYGGNDRVL 260 + +D G DRVL Sbjct: 269 RIELLRDLAGMDRVL 283 >gi|156973550|ref|YP_001444457.1| hypothetical protein VIBHAR_01251 [Vibrio harveyi ATCC BAA-1116] gi|156525144|gb|ABU70230.1| hypothetical protein VIBHAR_01251 [Vibrio harveyi ATCC BAA-1116] Length = 285 Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 94/261 (36%), Positives = 137/261 (52%), Gaps = 11/261 (4%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ LC V G ++ P+ L+ Q+ + +VR + E + I+G R+F+++ L Sbjct: 29 DAAVLLCHVLGKPRTYLLTWPEKALEAEQQAQFDDLLVRRIAGEPVAYIIGEREFWSLPL 88 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 +S T PRP+TE LV+ AL + ILDLGTGTGA+ LAL E P + + Sbjct: 89 KVSPSTLIPRPDTERLVEVALDKTY-----EQTGPILDLGTGTGAIALALASEMPKRQVM 143 Query: 126 GVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSS-VEGL-FDVIVSNPPYIESVIVDC 182 GVD+ +A E+A+ NA + FD Q WF V G F +IVSNPPYI+ Sbjct: 144 GVDLKQEAKELAEYNASQLNIKNVTFD--QGSWFEPIVSGTKFALIVSNPPYIDEQDPHL 201 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 +VR F+P+ +L +GL+ R I+D ++L + G + E GY+Q V I + Sbjct: 202 SQGDVR-FEPKSALVADENGLADIRHISDLARQYLEEGGWLAFEHGYDQGDAVREIMTNF 260 Query: 243 KLFLVNAFKDYGGNDRVLLFC 263 V DYGGN+RV L C Sbjct: 261 GYEQVVTENDYGGNERVTLGC 281 >gi|218783032|ref|YP_002434350.1| modification methylase, HemK family [Desulfatibacillum alkenivorans AK-01] gi|218764416|gb|ACL06882.1| modification methylase, HemK family [Desulfatibacillum alkenivorans AK-01] Length = 289 Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 84/230 (36%), Positives = 124/230 (53%), Gaps = 16/230 (6%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL----AFSLPRIEKRD 97 + R E + I+G RDF+ + L ++ PRPETE LV++AL A P Sbjct: 66 VKRRAAREPVAYIVGNRDFWTLELDVNPSVLIPRPETETLVETALEVLNAAQAP------ 119 Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 +R+LDLGTG+GA+ LAL E P + VD S +ALE AK+NA + ++ D + W Sbjct: 120 -MRVLDLGTGSGAIILALASEKPEHHYMAVDYSPQALETAKANAQKHNLN--VDFYKGSW 176 Query: 158 FSSVEGL--FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215 F +V L FD++VSNPPYI S + L EV ++P +LDGG G+ H I + Sbjct: 177 FEAVRCLDRFDLVVSNPPYIPSRDIPGLMPEVARYEPMSALDGGPQGMDHLALIIERAPE 236 Query: 216 HLNKDGLCSVEIGYNQKVDVVRI-FESRKLFLVNAFKDYGGNDRVLLFCR 264 HL G +E+G++QK V ++ E++ V +D G+ R + R Sbjct: 237 HLKPGGWLMLEMGFDQKELVEQVALETQAYENVRFVRDLAGHFRTAVMQR 286 >gi|294785108|ref|ZP_06750396.1| methyltransferase [Fusobacterium sp. 3_1_27] gi|294486822|gb|EFG34184.1| methyltransferase [Fusobacterium sp. 3_1_27] Length = 383 Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 76/222 (34%), Positives = 129/222 (58%), Gaps = 7/222 (3%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101 ++R+ K + + ILG +FY + +S PR +TE+LV+ + + +E+ + I Sbjct: 144 VLRAKKRKPLQYILGEWEFYGLPFKVSEGVLIPRADTEILVEQCIQL-MREVEEPN---I 199 Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 LD+G+G+GA+ +A+ E G+DI+ KA+E+A N N + + + ++S+ F + Sbjct: 200 LDIGSGSGAISIAIANELKSSSVTGIDINEKAIELANENKTLNKI-KNINFVKSNLFEKI 258 Query: 162 EGLF--DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 + F D+IVSNPPYI + L EV++++P+ +L DGL YR I+ +L Sbjct: 259 DKDFKYDLIVSNPPYISKNEYETLMPEVKNYEPQNALTDLGDGLYFYREISKLAGEYLKD 318 Query: 220 DGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 G + EIGYNQ DV +I ++ +++ KDYGGNDRV++ Sbjct: 319 TGYLAYEIGYNQAKDVTKILQNNNFDVLSVIKDYGGNDRVII 360 >gi|237740337|ref|ZP_04570818.1| methyltransferase [Fusobacterium sp. 2_1_31] gi|229422354|gb|EEO37401.1| methyltransferase [Fusobacterium sp. 2_1_31] Length = 369 Score = 136 bits (342), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 79/222 (35%), Positives = 126/222 (56%), Gaps = 7/222 (3%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101 ++R+ + + ILG +FY + + + PRP+TE+LV+ + + IE+ + I Sbjct: 131 MLRAKSRKPLQYILGEWEFYGLPFKVRENVLIPRPDTEILVEQCIQL-MREIEEPN---I 186 Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 LD+G+G+GA+ +A+ E G+DI+ A+ +A N V N V E + ++SD F + Sbjct: 187 LDIGSGSGAISIAIANELKSSSVTGLDINEDAIRLANENKVLNKV-ENVNFMKSDLFEKL 245 Query: 162 EGLF--DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 + F D+IVSNPPYI + L EV++F+P+ +L DGL YR I+ +L Sbjct: 246 DEDFKYDLIVSNPPYITKEEYETLMPEVKNFEPKNALTDLGDGLHFYREISKKAESYLKD 305 Query: 220 DGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 G + EIGY Q +V +I E +++ KDYGGNDRV+L Sbjct: 306 TGYLAFEIGYKQAKEVSKILEDNNFAILSVVKDYGGNDRVVL 347 >gi|21672455|ref|NP_660522.1| hypothetical protein BUsg166 [Buchnera aphidicola str. Sg (Schizaphis graminum)] gi|25090515|sp|Q8K9W9|HEMK_BUCAP RecName: Full=Protein methyltransferase hemK homolog gi|21623069|gb|AAM67733.1| HemK [Buchnera aphidicola str. Sg (Schizaphis graminum)] Length = 275 Score = 136 bits (342), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 87/254 (34%), Positives = 135/254 (53%), Gaps = 7/254 (2%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 ++ L V + +I++ + L Q L N I R E I I+G ++F+++ L Sbjct: 23 EAEILLSHVLKCTRIAIIINQEIDLSKEQYQKLNNFIYRRSIGEPIAYIIGKKEFWSLSL 82 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 +S T PRP+TE+LV+ L+ ++ K + ILDLGTG+GA+ LAL + + Sbjct: 83 CVSYKTLIPRPDTEILVEKILS----KVNK-NFRSILDLGTGSGAIALALASVCSHWNII 137 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185 GVD S AL+IAK N + + + + S+WFS + F +IVSNPPYI + L Sbjct: 138 GVDNSYSALKIAKINGLKLNL-KNVEFFYSNWFSHINEKFHIIVSNPPYIGIKEIQSLKK 196 Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245 ++ ++P +L DGL I S++L G +E G+ QK+ V F+ F Sbjct: 197 DIF-YEPFNALISKKDGLLDIELIIQKASQYLFDKGWLFIEHGWKQKLKVQYFFKKYNFF 255 Query: 246 LVNAFKDYGGNDRV 259 + +FKDYGGNDR+ Sbjct: 256 CIQSFKDYGGNDRI 269 >gi|85711947|ref|ZP_01043001.1| HemK [Idiomarina baltica OS145] gi|85694133|gb|EAQ32077.1| HemK [Idiomarina baltica OS145] Length = 282 Score = 136 bits (342), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 84/236 (35%), Positives = 128/236 (54%), Gaps = 10/236 (4%) Query: 26 PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85 P+ L D Q L N + R + E + I+G R+F+++ L + T PRP+TE LV++A Sbjct: 48 PERRLTDAQFQQLQNWVARRCRGEPVAYIVGEREFWSLSLAVDKSTLIPRPDTECLVETA 107 Query: 86 LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145 L+ SLP R+LDLGTGTGA+ LAL E P ++ VD S A+ +A+ NA G Sbjct: 108 LSLSLPAD-----ARVLDLGTGTGAIALALKSERPDWQVTAVDWSASAVSLAQRNARRLG 162 Query: 146 VSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203 ++ + L S WF S+ ++D+IVSNPPYI +VR F+PR +L G+ Sbjct: 163 LA--VEVLHSHWFDSLADRSVYDLIVSNPPYIAEDDAHLAQGDVR-FEPRSALVAERAGI 219 Query: 204 SHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRV 259 + IA+ +L +G +E G+ Q V+ + VN ++DYG +R+ Sbjct: 220 ADLHHIAEQGHAYLKPNGWLLMEHGWQQAQAVITLLREFGYKNVNIWRDYGNVERI 275 >gi|78484733|ref|YP_390658.1| HemK family modification methylase [Thiomicrospira crunogena XCL-2] gi|78363019|gb|ABB40984.1| modification methylase, HemK family [Thiomicrospira crunogena XCL-2] Length = 279 Score = 135 bits (341), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 86/240 (35%), Positives = 124/240 (51%), Gaps = 9/240 (3%) Query: 26 PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85 P S + Q F LT+ R ++ I ++G R+F+ + ++ DT PRP+TE+LV++A Sbjct: 48 PLSEAEHTQYFDLTS---RRVEGHPIAHLIGHREFWGMDFQVTPDTLIPRPDTEILVETA 104 Query: 86 LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145 L + LDLGTG+GA+ A+ P + VD AL +A+ NA + Sbjct: 105 LEIMASK--NNQAWSFLDLGTGSGAIACAIKASHPACEATAVDFQASALAVAQQNANQHH 162 Query: 146 VSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204 ++ F Q WF V+G FD+IVSNPPYIE +VR F+P +L G DGL Sbjct: 163 LTIHFK--QGSWFDPVKGQTFDLIVSNPPYIEEHDPHLKEGDVR-FEPLTALTSGEDGLD 219 Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 R I + +L G +E GYNQ V R+F+++ V + DYG N RV L R Sbjct: 220 DIRFIIEHAPTYLKPKGWLLIEHGYNQHEAVQRLFKAQGFTAVESRLDYGQNPRVTLGQR 279 >gi|227513056|ref|ZP_03943105.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Lactobacillus buchneri ATCC 11577] gi|227524271|ref|ZP_03954320.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Lactobacillus hilgardii ATCC 8290] gi|227083631|gb|EEI18943.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Lactobacillus buchneri ATCC 11577] gi|227088502|gb|EEI23814.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Lactobacillus hilgardii ATCC 8290] Length = 288 Score = 135 bits (341), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 85/246 (34%), Positives = 136/246 (55%), Gaps = 5/246 (2%) Query: 16 GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75 G S+ +++ + Q N + R + E + I+G +FY + L + S+ PR Sbjct: 40 GFSTTDMLIHYHDKMLSGQWLQFQNDVKRLISGEPVQYIVGQANFYGLTLNVDSNVLIPR 99 Query: 76 PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135 ETE LVD L + +++LD+GTG+GA+ +AL P ++ DIS AL+ Sbjct: 100 VETEELVDWIL--DQTTVYTNRPLKVLDIGTGSGAIAIALKANRPEWQVNASDISESALK 157 Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195 +A+ NA + V+ F + SD F+ + FD+IVSNPPYI + V + V++ +PRI+ Sbjct: 158 VAQQNAQLHHVAINF--ILSDMFAHINEAFDLIVSNPPYISASEVGDMDSSVKNNEPRIA 215 Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF-ESRKLFLVNAFKDYG 254 L DGL+ Y+++A GV HLN G VEIG++Q+ V +IF E+ +V A D Sbjct: 216 LFAADDGLAIYKSLAKGVDAHLNVGGQLFVEIGFHQETSVRKIFQEALPNAIVTAKHDVS 275 Query: 255 GNDRVL 260 G+ R++ Sbjct: 276 GHQRMV 281 >gi|146283508|ref|YP_001173661.1| methyl transferase [Pseudomonas stutzeri A1501] gi|145571713|gb|ABP80819.1| methyl transferase [Pseudomonas stutzeri A1501] Length = 275 Score = 135 bits (341), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 86/221 (38%), Positives = 126/221 (57%), Gaps = 8/221 (3%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101 + R + E + ILG + F+++ L +++DT PRP+TELLV++AL ++ R+ Sbjct: 58 LARRRQGEPVAYILGRQGFWSLELEVAADTLIPRPDTELLVETAL-----QLLSAAPARV 112 Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 LDLGTGTGA+ LAL E P ++ GVD A+ +A+ N + G+ TL SDWF+ + Sbjct: 113 LDLGTGTGAIALALATERPAWQVCGVDRVEAAVRLAERNRLRLGLHNAAFTL-SDWFAGL 171 Query: 162 EG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220 G F +IVSNPPYI + L +VR F+P+ +L G DGL RTI + HL Sbjct: 172 NGERFQMIVSNPPYIPASDPHLLQGDVR-FEPQSALIAGADGLDDIRTIIAQAAAHLQSG 230 Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 G +E GY+Q V + SR V + D GG++R+ L Sbjct: 231 GWLLLEHGYDQAEAVRMLLLSRGFEDVQSRLDLGGHERISL 271 >gi|83644570|ref|YP_433005.1| methylase of polypeptide chain release factors [Hahella chejuensis KCTC 2396] gi|83632613|gb|ABC28580.1| Methylase of polypeptide chain release factors [Hahella chejuensis KCTC 2396] Length = 276 Score = 135 bits (341), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 95/262 (36%), Positives = 140/262 (53%), Gaps = 18/262 (6%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDR-----QRFFLTNAIVRSLKHESIHRILGWRDF 60 D+ L V G +I DSVLD+ QR R + H ++G R+F Sbjct: 22 DAEVLLAHVLGKGRTYLISHNDSVLDEPALQAYQRLIAERETGRPVAH-----LIGKREF 76 Query: 61 YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120 +++ +S T PRPETELLV+ L + P K +LDLGTGTGA+ AL E P Sbjct: 77 WSLEFQVSPATLIPRPETELLVELVLEEAAPAGAK-----VLDLGTGTGAIACALAHERP 131 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVI 179 ++ VD+S +A+E+A +N ++ G++ L+S+W+ +V + F VIVSNPPYI+++ Sbjct: 132 DWRFTAVDVSQEAVELATTNVLSLGLTN-VRCLRSNWYDAVGDEQFHVIVSNPPYIDALD 190 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 + +VR F+P +L GL+ R IA G RHL GL +VE GY+Q IF Sbjct: 191 IHLTQGDVR-FEPASALVAADHGLADIRMIAAGAGRHLLAGGLLAVEHGYDQGAAAREIF 249 Query: 240 ESRKLFLVNAFKDYGGNDRVLL 261 + V +D G+DR+ L Sbjct: 250 STAGYVDVRTHQDLAGHDRITL 271 >gi|284007354|emb|CBA72731.1| protein methyltransferase (protein-glutamine N-methyltransferase) [Arsenophonus nasoniae] Length = 256 Score = 135 bits (341), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 89/247 (36%), Positives = 140/247 (56%), Gaps = 7/247 (2%) Query: 14 VTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFE 73 +TG + +I ++ L +Q+ L + +VR + E I ++ ++F+++ + +SS T Sbjct: 4 ITGKTRTFLIAFGETELSVKQQQQLEHLLVRRARGEPIAYLVEEKEFWSLPIKVSSVTLI 63 Query: 74 PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133 PRP+TE LV+ AL + + V+ILDLGTGTGAV LAL E P + VGVDIS A Sbjct: 64 PRPDTECLVERALQL----LSDKRAVKILDLGTGTGAVALALASECPQAQIVGVDISDAA 119 Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDP 192 + +A+ NA N + +S+WF+S+ FD+IVSNPPYI+ +VR F+P Sbjct: 120 ITLAQLNA-DNLLINNVKFCKSNWFTSLPIQQFDMIVSNPPYIDECDPHLQQGDVR-FEP 177 Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKD 252 + +L GL+ + I + + +L +G +E G+ Q V ++F V F+D Sbjct: 178 KTALISANHGLADIQLIIEQSANYLANNGWLLLEHGWLQGRQVRQLFSCHHYQQVVTFQD 237 Query: 253 YGGNDRV 259 YGGNDR+ Sbjct: 238 YGGNDRI 244 >gi|289765719|ref|ZP_06525097.1| methyltransferase [Fusobacterium sp. D11] gi|289717274|gb|EFD81286.1| methyltransferase [Fusobacterium sp. D11] Length = 370 Score = 135 bits (341), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 75/222 (33%), Positives = 130/222 (58%), Gaps = 7/222 (3%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101 ++R+ K + + ILG +FY + ++ PR +TE+LV+ + + +E+ + I Sbjct: 131 VLRAKKRKPLQYILGEWEFYGLPFKVNEGVLIPRADTEILVEQCIQL-MREVEEPN---I 186 Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 LD+G+G+GA+ +A+ E G+DI+ KA+++A N + N + E + ++S+ F + Sbjct: 187 LDIGSGSGAISIAIANELKSSSITGIDINEKAIKLANENKILNKI-ENVNFIESNLFEKL 245 Query: 162 EGLF--DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 + F D+IVSNPPYI + L EV++++P+ +L DGL YR I+ +L Sbjct: 246 DKDFKYDLIVSNPPYISKEEYETLMPEVKNYEPQNALTDLGDGLYFYREISKLAGEYLKD 305 Query: 220 DGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 G + EIGYNQ DV +I ++ +++ KDYGGNDRV++ Sbjct: 306 TGYLAYEIGYNQAKDVTKILQNNNFDILSVIKDYGGNDRVVI 347 >gi|290475216|ref|YP_003468102.1| N5-glutamine methyltransferase, modifies release factors RF-1 and RF-2 [Xenorhabdus bovienii SS-2004] gi|289174535|emb|CBJ81329.1| N5-glutamine methyltransferase, modifies release factors RF-1 and RF-2 [Xenorhabdus bovienii SS-2004] Length = 286 Score = 135 bits (341), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 91/262 (34%), Positives = 143/262 (54%), Gaps = 12/262 (4%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 RD+ L VTG S +I ++++ + L + + R ++ E + I+G R+F+++ Sbjct: 22 RDAEILLGYVTGRSRTYLIAFDETLISSEELHQLDSLLGRRIQGEPVAYIIGEREFWSLP 81 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 +S T PRP+TE LV+ AL LP RILDLGTGTGA+ LAL E Sbjct: 82 FAVSPATLIPRPDTECLVEKALEL-LP----DSPARILDLGTGTGAIALALASERNDCYV 136 Query: 125 VGVDISCKALEIAKSNAVTNG---VSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIV 180 GVDI+ A+ +A+ NA N + LQS+WF++V FD+IVSNPPYI+ Sbjct: 137 TGVDINSDAVMLAQYNAEKNAGKLAIHNVNFLQSEWFAAVGNQQFDMIVSNPPYIDECDP 196 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH-LNKDGLCSVEIGYNQKVDVVRIF 239 ++R F+P +L +G++ + I G +RH L+ +G +E G+ Q + V +F Sbjct: 197 HLQEGDIR-FEPATALIAAQNGMADLQAIV-GQARHFLSPNGWLLLEHGWKQGIVVRNLF 254 Query: 240 ESRKLFLVNAFKDYGGNDRVLL 261 + + F+DYGGN+R+ + Sbjct: 255 LEKGYQQIATFQDYGGNERITI 276 >gi|332184656|gb|AEE26910.1| modification methylase, HemK family [Francisella cf. novicida 3523] Length = 284 Score = 135 bits (340), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 85/256 (33%), Positives = 138/256 (53%), Gaps = 8/256 (3%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 D +C V + + ++ D LD + I+R L E + ILG++ F+N + Sbjct: 26 HDLQMIICDVLDVDKTYLCINSDRRLDKNTLKEIDEKILRLLAGEPLAYILGYKYFWNQK 85 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L ++ DT PR +TE+LV + L ++K ++ILDLGTGTGA+ LAL E + Sbjct: 86 LYVTKDTLIPRADTEVLVSTVLD---DIVDKNAKLKILDLGTGTGAIGLALAAELVNSQI 142 Query: 125 VGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDC 182 V VD+ ++L++AK+NA N ++ +F +QS W++S++ G FD+IVSNPPYI+ + Sbjct: 143 VAVDLYQQSLDVAKNNAQANNITNVKF--IQSSWYTSLDTGKFDIIVSNPPYIDLADTN- 199 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 + V++++P +L +GL+ + I LN GL +E G+ Q V +F Sbjct: 200 IEQSVKEYEPARALFAADNGLADIKEIISQAKNFLNPGGLVYIEHGFTQADAVTALFSQY 259 Query: 243 KLFLVNAFKDYGGNDR 258 + KD NDR Sbjct: 260 NFTDIKTVKDLNNNDR 275 >gi|256027763|ref|ZP_05441597.1| methyltransferase [Fusobacterium sp. D11] Length = 383 Score = 135 bits (340), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 75/222 (33%), Positives = 130/222 (58%), Gaps = 7/222 (3%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101 ++R+ K + + ILG +FY + ++ PR +TE+LV+ + + +E+ + I Sbjct: 144 VLRAKKRKPLQYILGEWEFYGLPFKVNEGVLIPRADTEILVEQCIQL-MREVEEPN---I 199 Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 LD+G+G+GA+ +A+ E G+DI+ KA+++A N + N + E + ++S+ F + Sbjct: 200 LDIGSGSGAISIAIANELKSSSITGIDINEKAIKLANENKILNKI-ENVNFIESNLFEKL 258 Query: 162 EGLF--DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 + F D+IVSNPPYI + L EV++++P+ +L DGL YR I+ +L Sbjct: 259 DKDFKYDLIVSNPPYISKEEYETLMPEVKNYEPQNALTDLGDGLYFYREISKLAGEYLKD 318 Query: 220 DGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 G + EIGYNQ DV +I ++ +++ KDYGGNDRV++ Sbjct: 319 TGYLAYEIGYNQAKDVTKILQNNNFDILSVIKDYGGNDRVVI 360 >gi|168203425|gb|ACA21560.1| HemK [Candidatus Pelagibacter ubique] Length = 280 Score = 135 bits (340), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 75/262 (28%), Positives = 146/262 (55%), Gaps = 4/262 (1%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A DS L V + +I++ + ++ + + + K + + ++G +DF+N Sbjct: 22 AQLDSEILLAEVINKNREYIILNQNHTVNKESYYQFKTLVEQRSKGKPVAYLVGKKDFWN 81 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + ++ PRP+TE++V+ L + + + + ILD+G G+G + L++LKE Sbjct: 82 YQFQINEHVLIPRPDTEIIVEQVLKIT----KFKSNLMILDIGVGSGCILLSVLKEKKNS 137 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182 +G+G+D+S K++EI+K NA+ G+ R ++D + G +D+I+SNPPYI + + Sbjct: 138 RGIGIDLSKKSVEISKLNALNLGLLNRLKIFKTDVDNFNFGKYDLIISNPPYINKLDLKY 197 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 L +V +F+P I+LDGG++G+S + + S + K G +EI +NQ+ V ++ ++ Sbjct: 198 LDKDVINFEPNIALDGGLEGISVISKVINKSSELIKKKGKLILEISFNQREKVKKLLINK 257 Query: 243 KLFLVNAFKDYGGNDRVLLFCR 264 ++ KDY NDR ++ + Sbjct: 258 GFYINKILKDYAKNDRCIISTK 279 >gi|188534014|ref|YP_001907811.1| Protein methyltransferase [Erwinia tasmaniensis Et1/99] gi|188029056|emb|CAO96924.1| Protein methyltransferase [Erwinia tasmaniensis Et1/99] Length = 281 Score = 135 bits (340), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 93/256 (36%), Positives = 138/256 (53%), Gaps = 8/256 (3%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 RD+ L VTG S +I D LD L +VR E I + G R+F+++ Sbjct: 22 RDAEILLGLVTGKSRAWLIGFDDHELDAATLKRLDALLVRRAAGEPIAYLTGEREFWSLS 81 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L ++ DT PRP++E+LV+ ALA LP +LDLGTG+GA+ LAL E + Sbjct: 82 LCVTPDTLIPRPDSEVLVEQALAH-LP----GGPCSVLDLGTGSGAIALALASERADCRV 136 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCL 183 +GVD A+ +A+ NA G++ +Q DWFS++ + F +IVSNPPYI++ Sbjct: 137 LGVDRIPAAVALAQHNAARLGLAN-ATFMQGDWFSALNQQRFAMIVSNPPYIDAADEHLA 195 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 +VR F+P +L G GL+ + IA R+L G +E G+ Q D+ +I + Sbjct: 196 QGDVR-FEPASALVAGDSGLADIKIIAAQAGRYLVNQGWLLLEHGWQQGEDIRQILADKG 254 Query: 244 LFLVNAFKDYGGNDRV 259 ++ +DYGGNDRV Sbjct: 255 FCQISTRQDYGGNDRV 270 >gi|291520819|emb|CBK79112.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Coprococcus catus GD/7] Length = 289 Score = 135 bits (340), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 89/258 (34%), Positives = 138/258 (53%), Gaps = 10/258 (3%) Query: 6 DSHSFLCRVTGLSSHQVIV---DPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 D+ L + G+S ++ DP +Q I R + + ++G +F Sbjct: 28 DAWYLLEHIYGISRVDFLIRRNDPFDEAQMKQSADYQALIRRRSEGYPVQYLMGSTEFMG 87 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + ++ PR +TE+LV++ALA P R+LD+ TG+G + L+L K Sbjct: 88 LPFFVNESVLIPRQDTEVLVETALAMMKPE------CRLLDMCTGSGCILLSLAKLGTVA 141 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182 +GVGVDIS AL++A+ N G+S+ + SD F SVEG+FD+IVSNPPYI + ++ Sbjct: 142 EGVGVDISEGALKVAERNRENLGLSQ-VKLVHSDLFGSVEGVFDMIVSNPPYIPTNDIED 200 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 L EV+D +P ++LDG DGL YR +A+ R+L G EIGY+Q V ++ + Sbjct: 201 LMREVKDHEPHLALDGSRDGLLFYRKLAEESGRYLVPGGSLLFEIGYDQGKAVSQLLDQA 260 Query: 243 KLFLVNAFKDYGGNDRVL 260 ++ KD G DRV+ Sbjct: 261 GFKDIHVKKDLAGLDRVV 278 >gi|157826556|ref|YP_001495620.1| bifunctional N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase/tRNA (m7G46) methyltransferase [Rickettsia bellii OSU 85-389] gi|157801860|gb|ABV78583.1| bifunctional N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase/tRNA (m7G46) methyltransferase [Rickettsia bellii OSU 85-389] Length = 563 Score = 135 bits (340), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 80/269 (29%), Positives = 139/269 (51%), Gaps = 30/269 (11%) Query: 22 VIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELL 81 ++ +P+ L+ + + + R LKH+ I ILG ++FY+ ++ PR +TE+L Sbjct: 43 LLANPEKQLNQLEIEAVEKVLERRLKHKPIAYILGTKEFYSREFIVNKHVLIPRNDTEIL 102 Query: 82 VDSALAFSLPR--------------------------IEKRDVVR---ILDLGTGTGAVC 112 +D L + ++ R+ ++ IL+LGTG+G + Sbjct: 103 IDVVLQYHSQHFQYHSQHSLCHSSNGGNPDKKQLDSVVKPRNNIKSSNILELGTGSGCIS 162 Query: 113 LALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSN 171 ++LL E P + DIS A+E+AKSNA+ + V++R + S+WF ++ + FD+IVSN Sbjct: 163 ISLLLELPNSQITATDISIDAIEVAKSNAIKHDVTDRLQIIHSNWFENIGKQKFDLIVSN 222 Query: 172 PPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231 PPYI + +E +++P I+L DGL Y+ IA+ + L ++G +EIGY Q Sbjct: 223 PPYISINEKPEMAIETINYEPSIALFAEEDGLLSYKIIAENAKKFLKQNGKIILEIGYKQ 282 Query: 232 KVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 V +IF + N +D ++RV+ Sbjct: 283 ADQVSQIFLDHGYVIDNIHQDLQSHNRVI 311 >gi|260598214|ref|YP_003210785.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Cronobacter turicensis z3032] gi|260217391|emb|CBA31447.1| Protein methyltransferase hemK [Cronobacter turicensis z3032] Length = 280 Score = 135 bits (339), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 92/258 (35%), Positives = 139/258 (53%), Gaps = 8/258 (3%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 RD+ L VTG + ++ ++ L D + L + R E + ++G R+F+++ Sbjct: 22 RDAEILLGFVTGRTRTFILAFGETALTDDELARLETLLARRAAGEPVAYLIGQREFWSLP 81 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L +S+ T PRP+TE LV+ ALA LP RILDLGTGTGA+ LA+ E P Sbjct: 82 LEVSTATLIPRPDTECLVEQALA-RLPAT----ACRILDLGTGTGAIALAIASERPDCHV 136 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCL 183 +D+ +A+E+AK NA G+ + LQS WFS++ + F +IVSNPPYI+ Sbjct: 137 TALDVIPEAVELAKRNAQRLGI-DNVTVLQSHWFSALTDVRFSLIVSNPPYIDGDDPHLT 195 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 +VR F+P+ +L GL+ +T+ G L +G +E G+ Q V +FE Sbjct: 196 QGDVR-FEPKSALVAENAGLADLKTLIVGARHFLEDNGGLLLEHGWQQGGAVRELFERAG 254 Query: 244 LFLVNAFKDYGGNDRVLL 261 V +DYGGN+R+ L Sbjct: 255 YQGVETCRDYGGNERLTL 272 >gi|262369774|ref|ZP_06063102.1| methyl transferase [Acinetobacter johnsonii SH046] gi|262315842|gb|EEY96881.1| methyl transferase [Acinetobacter johnsonii SH046] Length = 272 Score = 135 bits (339), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 89/258 (34%), Positives = 133/258 (51%), Gaps = 10/258 (3%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 +++ L +T + S +++ D VL D Q A+ R E + + G + F+ + Sbjct: 19 QENAWLLEHITKIDSFDLVMKKDQVLTDEQEQAYVAALARIEAGEPLAYVTGSQPFWTLD 78 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L ++ DT PRP+TE+LV++ L LP + RI+DLGTGTGAV L+L E + Sbjct: 79 LIVTPDTLVPRPDTEVLVETVLRLDLP-----EDARIVDLGTGTGAVALSLACERDTWDI 133 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCL 183 DI L +A+ NA + +++ S WF+ + FDVIVSNPPYI++ D Sbjct: 134 TATDIYEPTLAVAQQNAEKHDLNDVTFVCGS-WFAPLNRKFFDVIVSNPPYIDA---DDA 189 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 ++ +P +L GL+ R I +HL DG +E GY+Q V +IF+ Sbjct: 190 HMQDLATEPERALVAADHGLADLRVIIQQGKKHLTLDGWVVLEHGYDQADAVQKIFKEAG 249 Query: 244 LFLVNAFKDYGGNDRVLL 261 V KDYGGNDRV L Sbjct: 250 YKQVRTVKDYGGNDRVTL 267 >gi|260494287|ref|ZP_05814418.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Fusobacterium sp. 3_1_33] gi|260198433|gb|EEW95949.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Fusobacterium sp. 3_1_33] Length = 383 Score = 135 bits (339), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 76/222 (34%), Positives = 129/222 (58%), Gaps = 7/222 (3%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101 ++R+ K + + ILG +FY + ++ PR +TE+LV+ + + +E+ + I Sbjct: 144 VLRAKKRKPLQYILGEWEFYGLPFKVNEGVLIPRADTEILVEQCIQL-MREVEEPN---I 199 Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 LD+G+G+GA+ +A+ E G+DI+ KA+E+A N N + E + ++S+ F + Sbjct: 200 LDIGSGSGAISIAIANELKSSSVTGIDINEKAIELAIENKTLNKI-ENVNFIESNLFEKL 258 Query: 162 EGLF--DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 + F D+IVSNPPYI + L EV++++P+ +L DGL YR I+ +L Sbjct: 259 DKDFKYDLIVSNPPYISKEEYETLMPEVKNYEPQNALTDLGDGLYFYREISKLAGEYLKD 318 Query: 220 DGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 G + EIGYNQ DV +I ++ +++ KDYGGNDRV++ Sbjct: 319 TGYLAYEIGYNQAKDVTKILQNNNFDILSVIKDYGGNDRVVI 360 >gi|283832856|ref|ZP_06352597.1| protein-(glutamine-N5) methyltransferase [Citrobacter youngae ATCC 29220] gi|291071456|gb|EFE09565.1| protein-(glutamine-N5) methyltransferase [Citrobacter youngae ATCC 29220] Length = 277 Score = 135 bits (339), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 95/258 (36%), Positives = 131/258 (50%), Gaps = 8/258 (3%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 RD+ L VTG ++ ++VL + QR L + R + E + + G R+F+++ Sbjct: 22 RDAEILLEFVTGKGRTFILAFGETVLTEAQREQLATLVARRQRGEPVAHLTGVREFWSLP 81 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L +S T PRP+TE LV+ ALA LP RILDLGTGTGA+ LAL E P Sbjct: 82 LFVSPATLIPRPDTECLVEQALA-RLP----ASACRILDLGTGTGAIALALASERPDCAV 136 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183 VD A+ +A N + + LQSDWFS++ G FD+IVSNPPYI+ Sbjct: 137 TAVDRMPDAVALAMRNTRHLAI-DNVQVLQSDWFSALSGQQFDMIVSNPPYIDEQDPHLA 195 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 +VR F+P +L G +GL+ I D L G +E G+ Q V F Sbjct: 196 QGDVR-FEPLSALVAGENGLADIVHIIDSSRSVLTPGGYLLLEHGWQQGAAVREAFIRAG 254 Query: 244 LFLVNAFKDYGGNDRVLL 261 V +DYGGN+R+ L Sbjct: 255 YLAVETCRDYGGNERITL 272 >gi|311693604|gb|ADP96477.1| modification methylase, HemK family [marine bacterium HP15] Length = 283 Score = 135 bits (339), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 90/257 (35%), Positives = 131/257 (50%), Gaps = 9/257 (3%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L +TGLS P+ + D + + + +LG ++F+++ L Sbjct: 28 DAELLLSHITGLSRTSFRAWPEREVTDTHAEAFERLVQDRVAGRPVAHLLGHQEFWSLPL 87 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 +S+ T PRP+TE LV+ ALA LPR +LDLGTGTGA+ LAL E ++ Sbjct: 88 KVSASTLIPRPDTECLVEVALALPLPR-----QASVLDLGTGTGAIALALASEHGGWRIS 142 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLG 184 D +A+ +A+ NAV G++ +QS WFS +E FD+IVSNPPYI Sbjct: 143 ACDAVPEAVALARENAVALGLN--LSVVQSSWFSGLEPERFDLIVSNPPYIPDSDRHLEE 200 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 +VR F+P +L G DGL R I L + G VE G++Q V ++F +R Sbjct: 201 GDVR-FEPASALVSGSDGLDDLRLIISQAPDWLFEGGWLLVEHGFDQAEAVAQLFHARGF 259 Query: 245 FLVNAFKDYGGNDRVLL 261 V +DYG DR+ L Sbjct: 260 KAVETRQDYGNRDRMTL 276 >gi|153814376|ref|ZP_01967044.1| hypothetical protein RUMTOR_00586 [Ruminococcus torques ATCC 27756] gi|317500090|ref|ZP_07958325.1| hypothetical protein HMPREF1026_00267 [Lachnospiraceae bacterium 8_1_57FAA] gi|331087686|ref|ZP_08336612.1| protein-(glutamine-N5) methyltransferase [Lachnospiraceae bacterium 3_1_46FAA] gi|145848772|gb|EDK25690.1| hypothetical protein RUMTOR_00586 [Ruminococcus torques ATCC 27756] gi|316898575|gb|EFV20611.1| hypothetical protein HMPREF1026_00267 [Lachnospiraceae bacterium 8_1_57FAA] gi|330409667|gb|EGG89103.1| protein-(glutamine-N5) methyltransferase [Lachnospiraceae bacterium 3_1_46FAA] Length = 287 Score = 134 bits (338), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 88/260 (33%), Positives = 132/260 (50%), Gaps = 7/260 (2%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L VT +S P+ L + ++ I R + + I G ++F + Sbjct: 25 DAWYLLEYVTKISRAVFYAYPEKELTEEEKIQYEECIKRRAERIPLQHITGVQEFMGLPF 84 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL-----KESP 120 ++ PR +TE+LV+ AL + +++VRILDL TG+G + L++L K Sbjct: 85 LVNEHVLIPRQDTEVLVEQALCLLEKEKKHKEIVRILDLCTGSGCILLSMLHYVRRKRKI 144 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180 GVG DIS +AL +A NA G+ +F +Q D F +VEG FD+I+SNPPYI + + Sbjct: 145 DIYGVGSDISKEALAVAVENAKKLGIEAKF--VQGDLFENVEGSFDMILSNPPYIRTSEI 202 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 + L EVR DP +LDG DGL YR I ++L + G EIG +Q V + + Sbjct: 203 ERLQEEVRFHDPIKALDGKEDGLYFYRIIVKESRQYLKRGGWLIFEIGSDQAEAVKTLLQ 262 Query: 241 SRKLFLVNAFKDYGGNDRVL 260 + KD G DRV+ Sbjct: 263 EAGYENIEVKKDLAGLDRVV 282 >gi|56460032|ref|YP_155313.1| hypothetical protein IL0924 [Idiomarina loihiensis L2TR] gi|56179042|gb|AAV81764.1| Protoporphyrinogen oxidase [Idiomarina loihiensis L2TR] Length = 281 Score = 134 bits (338), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 88/259 (33%), Positives = 135/259 (52%), Gaps = 10/259 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A D + LC V ++ P+ L Q+ I+ K + + I G R+F++ Sbjct: 20 AAADVSALLCFVLDKEKTYLMTWPEKPLTQEQQRHYEECILARQKGKPVAHITGRREFWS 79 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +++ T PRP+TE LV++AL+ LP + R+LDLGTGTGAV LAL E P + Sbjct: 80 LMLEVNASTLIPRPDTETLVEAALSLELP-----ENARVLDLGTGTGAVALALKSERPGW 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIV 180 + D S A+E+A+ N+ G++ + L S+WF SV FD+I+SNPPYI++ Sbjct: 135 QVWACDKSGDAVELARRNSQALGLN--VEILCSNWFQSVPKSLKFDLILSNPPYIDAGDP 192 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 +VR F+P+ +L +GL+ TI + HL G +E G+ Q V + Sbjct: 193 HLSMGDVR-FEPQTALIAENNGLADIETIIKEANNHLADQGWLLLEQGWQQADSVAELLF 251 Query: 241 SRKLFLVNAFKDYGGNDRV 259 VN ++DY DRV Sbjct: 252 KSGYKKVNRWQDYARVDRV 270 >gi|226952753|ref|ZP_03823217.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Acinetobacter sp. ATCC 27244] gi|226836502|gb|EEH68885.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Acinetobacter sp. ATCC 27244] Length = 270 Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 87/263 (33%), Positives = 139/263 (52%), Gaps = 14/263 (5%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 +++ L + G++S ++ + + L + Q + + R + E + + G + F+ + Sbjct: 19 QEAAWLLEHILGVNSLELKLRLEQELTEIQEQAYLDGLARIEQGEPLAYVTGSQPFWTLD 78 Query: 65 LTLSSDTFEPRPETELLVDSALAFSL-PRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 L ++ DT PRP+TE+LV++ L SL P+ I+DLGTGTGA+ LAL E P + Sbjct: 79 LKVTHDTLVPRPDTEILVETVLKLSLDPQ------ANIVDLGTGTGAIALALASERPQWS 132 Query: 124 GVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVD 181 DI LE+A+ NA+ +G+S+ +F WF ++E FD+IVSNPPYI+ D Sbjct: 133 VTATDIYQPTLEVAQENALKHGLSQVKFAC--GAWFEALEQQQFDLIVSNPPYIDP---D 187 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 + ++ +P +L GL+ TI L +G ++E GY+Q V IFE Sbjct: 188 DVHMQKLKSEPERALIAANHGLADIETIIAQGKDWLKAEGWIALEHGYDQGQVVREIFEQ 247 Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264 + KDYGGNDRV L + Sbjct: 248 HGFNQIQTIKDYGGNDRVSLAQK 270 >gi|59711376|ref|YP_204152.1| N5-glutamine methyltransferase, modifies release factors RF-1 and RF-2 [Vibrio fischeri ES114] gi|59479477|gb|AAW85264.1| N5-glutamine methyltransferase, modifies release factors RF-1 and RF-2 [Vibrio fischeri ES114] Length = 284 Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 89/258 (34%), Positives = 128/258 (49%), Gaps = 9/258 (3%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ LC V ++ P+ ++ D + + R L E I I+G+R+F+++ L Sbjct: 27 DAAVLLCHVLDKPRSYLLTWPEKIVSDEELGNFNALLERRLAGEPIAYIVGYREFWSLPL 86 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 +S T PRP+TE LV+ AL P + ILDLGTGTGA+ LA+ E P + Sbjct: 87 KVSPTTLIPRPDTERLVEVALDHLTPNAQS-----ILDLGTGTGAIALAIASEMPTLNVI 141 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS--SVEGLFDVIVSNPPYIESVIVDCL 183 GVD A+E+AK NA N ++ + Q WF S+ FD+IVSNPPYI+ Sbjct: 142 GVDYQDDAVELAKGNAKINHIN-NVEFRQGSWFEPISLSDKFDIIVSNPPYIDGNDPHLS 200 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 +VR F+P+ +L +G S I +L G +E G+ Q + FE Sbjct: 201 EGDVR-FEPQTALVAEQNGFSDLIHIMQHGREYLLNGGWLMMEHGFEQGEQLRHFFEEHG 259 Query: 244 LFLVNAFKDYGGNDRVLL 261 V +DY GNDRV L Sbjct: 260 YINVKTEQDYAGNDRVTL 277 >gi|168704925|ref|ZP_02737202.1| modification methylase, HemK family protein [Gemmata obscuriglobus UQM 2246] Length = 291 Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 84/232 (36%), Positives = 118/232 (50%), Gaps = 7/232 (3%) Query: 32 DRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLP 91 D +R I R L + ++G R FY + + PR +TE LV AL Sbjct: 59 DAERAKYKELITRRLAGWPVAYLVGSRGFYLLNFDVDPAVLIPRSDTETLVGEALK---- 114 Query: 92 RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151 R++ +LD+GTG+G + ++L + D+S AL +AK NA+ N V++R Sbjct: 115 RLKPLTAPAVLDIGTGSGCIAVSLAHQKKDSHVTATDVSPDALAVAKRNAIKNNVADRMT 174 Query: 152 TLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209 LQ D F+ + FD++VSNPPYI L +VRD +PR++LDGG DGL+ YR I Sbjct: 175 FLQGDLFAPLPAGVTFDLVVSNPPYIAQSEFAELAPDVRDHEPRVALDGGPDGLAFYRRI 234 Query: 210 ADGVSRHLNKDGLCSVEIGYNQKVDV-VRIFESRKLFLVNAFKDYGGNDRVL 260 A V L G +EIG+ Q V I E +L L KD G N RV+ Sbjct: 235 AAAVGPFLKPGGSLLLEIGWKQDAAVRALIAEQPELELGPTIKDMGKNPRVV 286 >gi|296775700|gb|ADH42976.1| polypeptide chain release factor methylase [uncultured SAR11 cluster alpha proteobacterium H17925_38M03] Length = 279 Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 82/256 (32%), Positives = 132/256 (51%), Gaps = 5/256 (1%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 DS L + S +++V+ + + D++ + R ++E I I+ ++F+ + Sbjct: 25 DSEILLSKTLNKSREEILVNLNFEIKDKEILVFNEYLNRRSQNEPIAYIVEEKEFWGEKF 84 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 ++ DT PRPETELLVD L +I V ILD+GTG+G + L+LL G+ Sbjct: 85 YVNKDTLIPRPETELLVDKIL-----KIYNGKKVTILDMGTGSGCIILSLLNNLNKSYGI 139 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185 GVDIS +A+ IAK NA + + + + FD+IVSNPPY+ + L Sbjct: 140 GVDISKRAILIAKKNASRLKILNKVKFFNRPFENIFYKKFDLIVSNPPYVIRKDIKNLSP 199 Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245 +V+ F+P+I++DGG DGL + + L G+ ++EIG Q V +I + Sbjct: 200 DVKKFEPKIAIDGGNDGLDLIKKVIYKSKNILKIKGVLALEIGNEQYKKVSKILVNNSFK 259 Query: 246 LVNAFKDYGGNDRVLL 261 + N KDY N R ++ Sbjct: 260 IKNTIKDYKNNVRCII 275 >gi|332971800|gb|EGK10748.1| protein-(glutamine-N5) methyltransferase [Desmospora sp. 8437] Length = 314 Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 78/218 (35%), Positives = 117/218 (53%), Gaps = 11/218 (5%) Query: 50 SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109 + ++G ++FY + PRPETE+LV++ L I K V +D+GTG+G Sbjct: 94 PVQYLIGEQEFYGRSFRVEPSVLIPRPETEILVETVLR-EADGIWKGKAVTAVDMGTGSG 152 Query: 110 AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFD 166 A+ + L E P ++ V VD S AL++A+ N NG +R +Q DW + + D Sbjct: 153 AIAVTLAAERPAWEVVAVDRSPAALKVARQNGAKNGSGDRIRWMQGDWLEPLLKRDLRVD 212 Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE 226 V+VSNPPYI + + L +EVRD +PR++LDGG DGL YR + G+ L GL E Sbjct: 213 VVVSNPPYIPAGEIPRLDVEVRDHEPRMALDGGPDGLDPYRILVRGIPAVLKNPGLVVFE 272 Query: 227 IGYNQKVDVVRIFESR----KLFLVNAFKDYGGNDRVL 260 +G +Q V + E ++F V+ D G RV+ Sbjct: 273 VGEDQSETVGEMLEESLAGAQVFFVS---DLAGRPRVV 307 >gi|146318503|ref|YP_001198215.1| methylase of polypeptide chain release factors [Streptococcus suis 05ZYH33] gi|146320694|ref|YP_001200405.1| methylase of polypeptide chain release factors [Streptococcus suis 98HAH33] gi|253751629|ref|YP_003024770.1| methyltransferase [Streptococcus suis SC84] gi|253753531|ref|YP_003026672.1| methyltransferase [Streptococcus suis P1/7] gi|253755644|ref|YP_003028784.1| methyltransferase [Streptococcus suis BM407] gi|145689309|gb|ABP89815.1| Methylase of polypeptide chain release factors [Streptococcus suis 05ZYH33] gi|145691500|gb|ABP92005.1| Methylase of polypeptide chain release factors [Streptococcus suis 98HAH33] gi|251815918|emb|CAZ51532.1| putative methyltransferase [Streptococcus suis SC84] gi|251818108|emb|CAZ55902.1| putative methyltransferase [Streptococcus suis BM407] gi|251819777|emb|CAR45684.1| putative methyltransferase [Streptococcus suis P1/7] gi|292558284|gb|ADE31285.1| Modification methylase HemK [Streptococcus suis GZ1] gi|319758067|gb|ADV70009.1| methylase of polypeptide chain release factors [Streptococcus suis JS14] Length = 277 Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 86/224 (38%), Positives = 121/224 (54%), Gaps = 15/224 (6%) Query: 40 NAIVRSL-KHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV 98 +AI + L +H I+G DF+ + + PRPETE LVD L + Sbjct: 56 DAIFQQLSQHRPAQYIIGKADFHGLEFAVDERVLIPRPETEELVDLIL-----QENSGAS 110 Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 +RILD+GTG+GA+ ++L K P ++ V VDIS AL +A+ NA TN VS F L+SD Sbjct: 111 LRILDIGTGSGAIAISLAKARPDWEVVAVDISNDALAVAQENARTNQVSVHF--LESDVL 168 Query: 159 SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 +V G FD+IVSNPPYI D +GL V +P ++L DG++ YR IA+ L Sbjct: 169 QAVTGKFDIIVSNPPYISPDDTDEVGLNVLTSEPHLALFAEEDGMAIYRQIAEQAGAFLK 228 Query: 219 KDGLCSVEIGYNQKVDVVRI----FESRKLFLVNAFKDYGGNDR 258 ++G EIGY Q D+ + F ++ + KD G DR Sbjct: 229 ENGKLYFEIGYKQGQDLTDLLALHFPQKQ---IRVLKDQFGQDR 269 >gi|238919471|ref|YP_002932986.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Edwardsiella ictaluri 93-146] gi|238869040|gb|ACR68751.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Edwardsiella ictaluri 93-146] Length = 279 Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 91/262 (34%), Positives = 139/262 (53%), Gaps = 10/262 (3%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 RD+ L VTG ++ +++L Q LT+ + R ++ E + ++G R+F+++ Sbjct: 22 RDAEILLEHVTGRGRSFLLAFGETLLTAAQLAQLTSLLARRVQGEPVAYLIGEREFWSLP 81 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L +S T PRP+TE LV+ AL LP V+I+DLGTGTGA+ LAL E P + Sbjct: 82 LAVSPATLIPRPDTECLVEQAL-LRLPATP----VQIVDLGTGTGAIALALASERPDCQV 136 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183 V+ + A+ +A+ NA G+S R + LQ WF+ + G F +IVSNPPYI++ Sbjct: 137 SAVEFNPDAVALAQHNAARLGLS-RVEILQGSWFTPLAGRRFTLIVSNPPYIDAADGHLS 195 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 +VR F+P +L GL+ R IA +L G +E G+ Q V + Sbjct: 196 QGDVR-FEPASALVAAEQGLADLRAIARQAPDYLALGGWLLLEHGWQQGAAVRALLTEYG 254 Query: 244 LFLVNAFKDYGGNDRVLL--FC 263 V + +DYG N+RV L +C Sbjct: 255 FCRVESVRDYGNNERVTLGQYC 276 >gi|34581095|ref|ZP_00142575.1| possible protoporphyrinogen oxidase [Rickettsia sibirica 246] gi|28262480|gb|EAA25984.1| possible protoporphyrinogen oxidase [Rickettsia sibirica 246] Length = 524 Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 83/262 (31%), Positives = 133/262 (50%), Gaps = 21/262 (8%) Query: 22 VIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELL 81 ++++ D L++ + + R LKHE I I G ++FY+ ++ PR +TE+L Sbjct: 43 LLINLDEQLNEAKIEAFEKLLARRLKHEPIVYITGVKEFYSREFIVNKHVLIPRSDTEVL 102 Query: 82 VDSAL---AFSLPRIEKRD-----------------VVRILDLGTGTGAVCLALLKESPF 121 VD + EK+ + IL+LGTG+G + ++LL E P Sbjct: 103 VDVVFQCHSHESGNPEKKQPNPCFRGNDISENCNDKFLNILELGTGSGCIAISLLCELPH 162 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIV 180 + DIS A++I KSNA V++R + S+WF ++E FD IVSNPPYI Sbjct: 163 ANVIATDISLDAIDIIKSNAAKYEVTDRIQIIHSNWFENIETQKFDFIVSNPPYIAHSEK 222 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 + +E +++P I+L DGL Y IA+ + L +G +EIG+ Q+ V +IF Sbjct: 223 SEMAIETINYEPSIALFAEKDGLQAYFLIAENAKQFLKPNGKIILEIGFKQEEAVTQIFL 282 Query: 241 SRKLFLVNAFKDYGGNDRVLLF 262 + + +KD G+ RV+LF Sbjct: 283 DHGYNIESVYKDLQGHSRVILF 304 >gi|50121118|ref|YP_050285.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Pectobacterium atrosepticum SCRI1043] gi|49611644|emb|CAG75093.1| protein methyltransferase [Pectobacterium atrosepticum SCRI1043] Length = 281 Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 92/259 (35%), Positives = 140/259 (54%), Gaps = 10/259 (3%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 RD+ L VTG S ++ ++ L ++ LT + R + E I ++G R+F+++ Sbjct: 22 RDAEILLGFVTGKSRTFLLAFGETELSAAEQQPLTELLARREQGEPIAYLIGVREFWSLP 81 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L +S T PRP+TE LV+ AL LP+ +LDLGTGTGA+ LAL E + Sbjct: 82 LAVSPATLIPRPDTECLVEQAL-LRLPQTP----CSVLDLGTGTGAIALALASERRDCRV 136 Query: 125 VGVDISCKALEIAKSNAVTNGV-SERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDC 182 +GVD+ A+ +A NA + + RF L W+S +E + F +IVSNPPYI+ V Sbjct: 137 IGVDLQPDAVALATKNAQQLKLDNARF--LPGSWYSPLEHMRFALIVSNPPYIDVDDVHL 194 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 +VR F+P +L +GL+ R I + +L+ G +E G+ Q V R+ + R Sbjct: 195 AQGDVR-FEPASALIAADNGLADLRAIIESAPHYLDAGGWLLLEHGWQQGDAVRRLLQVR 253 Query: 243 KLFLVNAFKDYGGNDRVLL 261 + ++DYGGNDRV L Sbjct: 254 GFTQIETYQDYGGNDRVSL 272 >gi|225575053|ref|ZP_03783663.1| hypothetical protein RUMHYD_03142 [Blautia hydrogenotrophica DSM 10507] gi|225037723|gb|EEG47969.1| hypothetical protein RUMHYD_03142 [Blautia hydrogenotrophica DSM 10507] Length = 283 Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 85/243 (34%), Positives = 127/243 (52%), Gaps = 21/243 (8%) Query: 32 DRQRFFLTNAIVRSLKHESIHRILGWR-------------DFYNVRLTLSSDTFEPRPET 78 DR +FL + + E R++ R F + + PR +T Sbjct: 38 DRAHYFLRESEEAGSQEEEYRRLISLRCGRIPLQHLTHQAWFMGLEFYVDGRVLVPRQDT 97 Query: 79 ELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAK 138 E+LV+ A+ R+E D R+LD+ TG+G + L++L + P KG GVD+S ALE+A+ Sbjct: 98 EILVEEAVR----RLE--DGQRLLDMCTGSGCILLSILSQKPCCKGTGVDLSADALEVAR 151 Query: 139 SNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG 198 N ++ F QSD F+ + G +++IVSNPPYI + ++ L EVR +DP ++LDG Sbjct: 152 LNGRRLNITADFR--QSDLFTDIGGRYEMIVSNPPYIPTGVIPTLEEEVRSYDPNLALDG 209 Query: 199 GIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258 G DGLS YR I + S L G EIG++Q V + E+ + KD G DR Sbjct: 210 GEDGLSFYRRIVEQASTRLEDGGWLLFEIGHDQGRCVRDMMENAGYGELQVVKDLAGRDR 269 Query: 259 VLL 261 V+L Sbjct: 270 VVL 272 >gi|310767483|gb|ADP12433.1| Protein methyltransferase [Erwinia sp. Ejp617] Length = 281 Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 92/256 (35%), Positives = 136/256 (53%), Gaps = 8/256 (3%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 RD+ L VTG S +I DS LD L + R E I + G R+F+++ Sbjct: 22 RDAEILLGFVTGKSRAWLIGFDDSELDAVALAQLDALLKRRTAGEPIAYLTGEREFWSLS 81 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L+++ DT PRP++E+LV+ ALA LP ILDLGTG+GA+ LAL E P + Sbjct: 82 LSVTPDTLIPRPDSEVLVEQALAH-LPVAAG----SILDLGTGSGAIALALASERPDCQV 136 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCL 183 +G+D A+ +A+ NA G++ + DWFS++ + F VIVSNPPYI++ Sbjct: 137 IGIDRIPAAVALAQHNAARLGLTNA-TFMPGDWFSALKQQQFAVIVSNPPYIDATDKHLS 195 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 +VR F+P +L G GL+ + IA ++L G +E G+ Q + +I Sbjct: 196 QGDVR-FEPASALVAGDGGLADIKIIAAQAGQYLANGGWLLLEHGWQQGAQIRQILSDHH 254 Query: 244 LFLVNAFKDYGGNDRV 259 + +DYGGNDRV Sbjct: 255 FCQIATCQDYGGNDRV 270 >gi|171462957|ref|YP_001797070.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Polynucleobacter necessarius subsp. necessarius STIR1] gi|171192495|gb|ACB43456.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 280 Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 83/218 (38%), Positives = 123/218 (56%), Gaps = 8/218 (3%) Query: 46 LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDL 104 LK E I ++G R F+N+ L ++ PRPETELLV+ L I + + RILDL Sbjct: 64 LKGEPIAYLIGKRGFHNIDLFVAPGVLIPRPETELLVE----IGLQEIRRLNAPTRILDL 119 Query: 105 GTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG- 163 GTG+GA+ LA+ E+P D S +AL+IAK+NA ++ + + LQ W+ ++EG Sbjct: 120 GTGSGAIALAIAHEAPQAMVTATDQSNQALDIAKTNAKQLMLTNQVEFLQGSWYEAIEGN 179 Query: 164 -LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL 222 FD+I+SNPPYI S + ++R F+P +L D LS TI G +HL +GL Sbjct: 180 APFDIILSNPPYIASQDLHLKQGDLR-FEPLSALTDHKDSLSCLETIISGARQHLQLNGL 238 Query: 223 CSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 +VE ++Q VV + + + A D GG+ RV+ Sbjct: 239 IAVEHSFDQSDAVVALMKQAGFHNIQAHFDLGGHYRVV 276 >gi|332532478|ref|ZP_08408356.1| methylase of polypeptide chain release factors [Pseudoalteromonas haloplanktis ANT/505] gi|332038121|gb|EGI74568.1| methylase of polypeptide chain release factors [Pseudoalteromonas haloplanktis ANT/505] Length = 279 Score = 134 bits (336), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 86/237 (36%), Positives = 124/237 (52%), Gaps = 8/237 (3%) Query: 26 PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85 P+ L D Q+ I R LK E + I G R+F+++ L +++ T PRP+TE LV+ A Sbjct: 46 PEHALSDEQQSQFNVFIQRRLKGEPVAHITGLREFWSLSLEVNATTLIPRPDTETLVEQA 105 Query: 86 LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145 L +LP K +LDLGTGTGA+ LAL E P ++ VD A+ +A N Sbjct: 106 LEIALPATAK-----VLDLGTGTGAIALALGSEMPSWQITAVDRVSDAVALATRNQQRLA 160 Query: 146 VSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204 ++ QS+WFS + G F++IV+NPPYIES + +VR F+P +L G+S Sbjct: 161 IN-NVHVKQSNWFSELHGEKFNLIVTNPPYIESSDIHLNQGDVR-FEPLSALVADDCGMS 218 Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 + I +L+ +G +E G+ Q V FE + KD G NDRV L Sbjct: 219 DIKQIITQSRDYLSSNGYLLIEHGFEQGEAVRHFFEKMAFVNIKTVKDLGNNDRVTL 275 >gi|85860526|ref|YP_462728.1| peptide release factor-glutamine N5-methyltransferase [Syntrophus aciditrophicus SB] gi|85723617|gb|ABC78560.1| peptide release factor-glutamine N5-methyltransferase [Syntrophus aciditrophicus SB] Length = 316 Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 82/220 (37%), Positives = 119/220 (54%), Gaps = 3/220 (1%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101 + R K E + I+G ++F+++ + PRP+TE+LV+ + R I Sbjct: 89 VARRQKGEPVAYIIGRKEFWSLDFAVDPRVLIPRPDTEVLVEEVIKVLGSGRASRP--EI 146 Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 LDLGTG+GA+ +AL E P + DIS KAL ++ NA +GV+ R L+ + V Sbjct: 147 LDLGTGSGAIAVALAHECPHARITATDISRKALAVSAGNAERHGVASRITFLEGNLLDPV 206 Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221 G FDVIVSNPPYI+S L EVR+F+PR +L G G+ Y I + L G Sbjct: 207 MGKFDVIVSNPPYIDSGDYARLSAEVRNFEPREALLAGEQGMDFYSAIIPQAACRLKPGG 266 Query: 222 LCSVEIGYNQKVDVVRIFESRKLFLVNAF-KDYGGNDRVL 260 +EIG +QK ++ R+F+ + AF KDY G RV+ Sbjct: 267 WLLLEIGDSQKENLNRLFQQSDAYQDLAFRKDYAGRWRVV 306 >gi|55822720|ref|YP_141161.1| protoporphyrinogen oxidase [Streptococcus thermophilus CNRZ1066] gi|55738705|gb|AAV62346.1| protoporphyrinogen oxidase [Streptococcus thermophilus CNRZ1066] Length = 277 Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 83/230 (36%), Positives = 124/230 (53%), Gaps = 14/230 (6%) Query: 37 FLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR 96 L + + H+ ILG+ +F+ +R + PRPETE LVD LA + P E Sbjct: 54 LLAHIFTQLTAHKPAQYILGYEEFHGLRFQVDERVLIPRPETEELVDLILAEN-PNTE-- 110 Query: 97 DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 +++LD+GTG+GA+ ++L K P ++ D+S AL +AK NA N V F + +D Sbjct: 111 --LKVLDIGTGSGAIAVSLKKSRPMWQVTASDLSADALVLAKDNAKLNRVDISF--VLAD 166 Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216 F +V G FD+IVSNPPYI D +GL V +P+++L DGL+ YR I + ++ Sbjct: 167 VFENVSGCFDIIVSNPPYISENDKDEVGLNVLTSEPKMALFADEDGLAIYRQILEDADKY 226 Query: 217 LNKDGLCSVEIGYNQKVDVVRI----FESRKLFLVNAFKDYGGNDRVLLF 262 LN G EIGY Q D+ ++ F + V KD G DR+++ Sbjct: 227 LNPQGKLYFEIGYKQGEDLRKLLSLHFPDKH---VRVLKDQFGQDRMVVM 273 >gi|258621066|ref|ZP_05716100.1| conserved hypothetical protein [Vibrio mimicus VM573] gi|258586454|gb|EEW11169.1| conserved hypothetical protein [Vibrio mimicus VM573] Length = 286 Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 93/261 (35%), Positives = 134/261 (51%), Gaps = 15/261 (5%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ LC V ++ PD L++ L + R + E + ILG R+F+++ L Sbjct: 27 DAAVLLCHVLAKPRSYLLTWPDKTLEEPALVSLNALLARRMAGEPVAYILGEREFWSLPL 86 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV--RILDLGTGTGAVCLALLKESPFFK 123 +S T PRP+TE LV+ AL EK ++ +LDLGTGTGA+ LAL E P + Sbjct: 87 KVSPSTLIPRPDTERLVELAL-------EKAALIEGELLDLGTGTGAIALALASELPLRR 139 Query: 124 GVGVDISCKALEIAKSNAVTNGV-SERFDTLQSDWFSSVE--GLFDVIVSNPPYIESVIV 180 G+D+ +A+E+A+ NA + + +F LQ WFS + F +IVSNPPYIE Sbjct: 140 VTGIDLRPEAVELAQENATRLSILNTQF--LQGSWFSPLADGTKFALIVSNPPYIEENDP 197 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 +VR F+P+ +L +GL+ R I+ R L + G E GY+Q V I Sbjct: 198 HLNQGDVR-FEPKSALVAEENGLADIRYISTHAPRFLLEGGWLLFEHGYDQGEAVRTILR 256 Query: 241 SRKLFLVNAFKDYGGNDRVLL 261 V +DY GNDRV L Sbjct: 257 ELGYQSVTTEQDYAGNDRVTL 277 >gi|219682102|ref|YP_002468486.1| HemK protein [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|219621835|gb|ACL29991.1| HemK protein [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|311085915|gb|ADP65997.1| HemK protein [Buchnera aphidicola str. LL01 (Acyrthosiphon pisum)] gi|311086486|gb|ADP66567.1| HemK protein [Buchnera aphidicola str. TLW03 (Acyrthosiphon pisum)] gi|311087069|gb|ADP67149.1| HemK protein [Buchnera aphidicola str. JF99 (Acyrthosiphon pisum)] gi|311087621|gb|ADP67700.1| HemK protein [Buchnera aphidicola str. JF98 (Acyrthosiphon pisum)] Length = 277 Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 87/256 (33%), Positives = 138/256 (53%), Gaps = 7/256 (2%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 +S L VT + +I+ + L ++Q +L + I R E I I+ ++F+++ L Sbjct: 23 ESELLLSYVTKHTRSFIIISDEIQLTEKQYKYLNHLIHRRSLGEPIAYIIKEKEFWSLSL 82 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 +S DT PRP+TE+LV+ AL+ +I K + ILDLGTG GA+ LAL + + + Sbjct: 83 CVSYDTLIPRPDTEILVERALS----KI-KSNSACILDLGTGCGAIALALASINSNWNII 137 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185 G+D S AL IA+ NA + SDWFS+++ F++IVSNPPY+ + Sbjct: 138 GIDKSENALAIARINASKLNF-KNVTFFFSDWFSNIKKKFNIIVSNPPYVSKKEIKFFKK 196 Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245 ++ F+P +L +GLS I +L G +E G+ QKV V +F+ Sbjct: 197 DIF-FEPLSALISDNNGLSDIENIIKNSKHYLFYGGWLMIEHGWRQKVKVQYLFKKYNFH 255 Query: 246 LVNAFKDYGGNDRVLL 261 + +++DYGGNDRV + Sbjct: 256 EIESYQDYGGNDRVTI 271 >gi|269961570|ref|ZP_06175932.1| conserved hypothetical protein [Vibrio harveyi 1DA3] gi|269833611|gb|EEZ87708.1| conserved hypothetical protein [Vibrio harveyi 1DA3] Length = 285 Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 91/261 (34%), Positives = 134/261 (51%), Gaps = 11/261 (4%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ LC V G ++ P+ L+ Q+ + R + E + I+G R+F+++ L Sbjct: 29 DAAVLLCHVLGKPRTYLLTWPERALETEQQAQFDALLERRIAGEPVAYIIGEREFWSLPL 88 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 +S T PRP+TE LV+ AL + + ILDLGTGTGA+ LAL E P + + Sbjct: 89 KVSPSTLIPRPDTERLVEVALDKTFGQTGP-----ILDLGTGTGAIALALASEMPNRQVM 143 Query: 126 GVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDC 182 G+D+ +A E+A+ NA + FD Q WF + F +IVSNPPYI+ Sbjct: 144 GIDLKQEAKELAEHNASQLNIKNVTFD--QGSWFEPIASGTKFALIVSNPPYIDEKDPHL 201 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 +VR F+P+ +L +GL+ R I+D ++L + G + E GY+Q V I Sbjct: 202 SQGDVR-FEPKSALVADENGLADIRHISDLARQYLQEGGWLAFEHGYDQGEAVREIMTHF 260 Query: 243 KLFLVNAFKDYGGNDRVLLFC 263 V KDYG NDRV L C Sbjct: 261 GFEQVVTEKDYGDNDRVTLGC 281 >gi|329766952|ref|ZP_08258480.1| protein-(glutamine-N5) methyltransferase [Gemella haemolysans M341] gi|328837677|gb|EGF87302.1| protein-(glutamine-N5) methyltransferase [Gemella haemolysans M341] Length = 280 Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 78/213 (36%), Positives = 122/213 (57%), Gaps = 11/213 (5%) Query: 56 GWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL 115 G+ FY+ + ++ D PR ETE L+ + + + I K ++ +ILDL TG+G + + L Sbjct: 74 GFEYFYDRKFKVTKDVLSPRMETEELIYKVIEY-IKSINKNNI-KILDLCTGSGIIGITL 131 Query: 116 LKE--SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173 KE S K V DIS +AL++AK NA+ N +F +QSD F ++ FD+IVSNPP Sbjct: 132 RKELESKSLKVVASDISEEALKVAKENAIMNEAEVKF--IQSDIFENINEKFDIIVSNPP 189 Query: 174 YIESVIVDCLGLE--VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231 YI D + +E V ++DP ++L DG+ YR I + +LNKDG+ EIGY+Q Sbjct: 190 YI--AYSDKITMEDNVLNYDPHLALFAEEDGMYFYREIVENSKEYLNKDGMIFFEIGYDQ 247 Query: 232 KVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 + ++++ + F +KD G DR+ + R Sbjct: 248 REKILKLANENE-FKAEVYKDINGRDRMAILER 279 >gi|292488089|ref|YP_003530966.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Erwinia amylovora CFBP1430] gi|292899300|ref|YP_003538669.1| protein methyltransferase [Erwinia amylovora ATCC 49946] gi|291199148|emb|CBJ46262.1| protein methyltransferase [Erwinia amylovora ATCC 49946] gi|291553513|emb|CBA20558.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Erwinia amylovora CFBP1430] Length = 281 Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 92/256 (35%), Positives = 135/256 (52%), Gaps = 8/256 (3%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 RD+ L VTG S +I DSVLD L + R E I + G R+F+++ Sbjct: 22 RDAEILLQLVTGKSRAWLIGFDDSVLDAAALEQLHALLTRRAAGEPIAYLTGEREFWSLS 81 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L ++ DT PRP++E+LV+ ALA LP ILDLGTG+GA+ LAL E P + Sbjct: 82 LNVTPDTLIPRPDSEVLVEQALAH-LPDA----ACSILDLGTGSGAIALALASERPDCQI 136 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCL 183 G+D A+ +A+ NA G++ + +WFS+++ F VIVSNPPYI++ Sbjct: 137 SGIDRIPAAVALAQHNAARLGLANA-TFMPGNWFSALKPQQFAVIVSNPPYIDAADKHLS 195 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 +VR F+P +L G GL+ + IA ++L G +E G+ Q + +I Sbjct: 196 QGDVR-FEPASALVAGDGGLADIKIIAAQAGQYLANGGWLLLEHGWQQGAQIRQILSDNH 254 Query: 244 LFLVNAFKDYGGNDRV 259 + +DYGGNDRV Sbjct: 255 YCRIETCQDYGGNDRV 270 >gi|262166265|ref|ZP_06034002.1| Polypeptide chain release factor methylase [Vibrio mimicus VM223] gi|262025981|gb|EEY44649.1| Polypeptide chain release factor methylase [Vibrio mimicus VM223] Length = 286 Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 93/261 (35%), Positives = 134/261 (51%), Gaps = 15/261 (5%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ LC V ++ PD L++ L + + R + E + ILG R+F+++ L Sbjct: 27 DAAVLLCHVLAKPRSYLLTWPDKTLEEPALVSLNSLLTRRMAGEPVAYILGEREFWSLPL 86 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV--RILDLGTGTGAVCLALLKESPFFK 123 +S T PRP+TE LV+ AL EK ++ +LDLGTGTGA+ LAL E P + Sbjct: 87 KVSPSTLIPRPDTERLVELAL-------EKAALIEGELLDLGTGTGAIALALASELPLRR 139 Query: 124 GVGVDISCKALEIAKSNAVTNGV-SERFDTLQSDWFSSVE--GLFDVIVSNPPYIESVIV 180 G+D+ +A E+A+ NA + + +F LQ WFS + F +IVSNPPYIE Sbjct: 140 VTGIDLRPEAAELAQENATRLSILNTQF--LQGSWFSPLADGTKFALIVSNPPYIEENDP 197 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 +VR F+P+ +L +GL+ R I+ R L + G E GY+Q V I Sbjct: 198 HLNQGDVR-FEPKSALVAEENGLADIRYISTHAPRFLLEGGWLLFEHGYDQGEAVRTILR 256 Query: 241 SRKLFLVNAFKDYGGNDRVLL 261 V +DY GNDRV L Sbjct: 257 ELGYQSVTTEQDYAGNDRVTL 277 >gi|116627621|ref|YP_820240.1| protoporphyrinogen oxidase [Streptococcus thermophilus LMD-9] gi|116100898|gb|ABJ66044.1| Methylase of polypeptide chain release factor [Streptococcus thermophilus LMD-9] gi|312278143|gb|ADQ62800.1| Protein-(Glutamine-N5) methyltransferase, release factor-specific [Streptococcus thermophilus ND03] Length = 277 Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 83/230 (36%), Positives = 124/230 (53%), Gaps = 14/230 (6%) Query: 37 FLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR 96 L + + H+ ILG+ +F+ +R + PRPETE LVD LA + P E Sbjct: 54 LLAHIFTQLTAHKPAQYILGYEEFHGLRFQVDERVLIPRPETEELVDLILAEN-PNTE-- 110 Query: 97 DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 +++LD+GTG+GA+ ++L K P ++ D+S AL +AK NA N V F + +D Sbjct: 111 --LKVLDIGTGSGAIAVSLKKSRPMWQVTASDLSADALVLAKDNAKLNRVDISF--VLAD 166 Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216 F +V G FD+IVSNPPYI D +GL V +P+++L DGL+ YR I + ++ Sbjct: 167 VFENVSGCFDIIVSNPPYISENDKDEVGLNVLTSEPKMALFADEDGLAIYRQILEDADKY 226 Query: 217 LNKDGLCSVEIGYNQKVDVVRI----FESRKLFLVNAFKDYGGNDRVLLF 262 LN G EIGY Q D+ ++ F + V KD G DR+++ Sbjct: 227 LNPQGKLYFEIGYKQGEDLRKLLSLHFPDKH---VRVLKDQFGQDRMVVM 273 >gi|296327944|ref|ZP_06870479.1| polypeptide chain release factor methyltransferase HemK [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|296154900|gb|EFG95682.1| polypeptide chain release factor methyltransferase HemK [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 383 Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 75/222 (33%), Positives = 129/222 (58%), Gaps = 7/222 (3%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101 ++R+ K + + ILG +FY + +S PR +TE+LV+ + + +E+ + I Sbjct: 144 VLRAKKRKPLQYILGEWEFYGLPFKMSEGVLIPRADTEILVEQCIQL-MREVEEPN---I 199 Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 LD+G+G+GA+ +A+ E G+DI+ KA+++A N + N + E + ++S+ F + Sbjct: 200 LDIGSGSGAISIAVANELKSSSVTGIDINEKAIKLAIENKILNKI-ENVNFIESNLFGKL 258 Query: 162 EGLF--DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 + F D+IVSNPPYI + L EV++++P+ +L DGL Y+ I+ +L Sbjct: 259 DKDFKYDLIVSNPPYISKEEYETLMPEVKNYEPQNALTDLGDGLHFYKEISKLAGEYLKD 318 Query: 220 DGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 G + EIGYNQ DV +I + +++ KDYGGNDRV++ Sbjct: 319 TGYLAFEIGYNQAKDVSKILQDNNFAILSIVKDYGGNDRVII 360 >gi|254504444|ref|ZP_05116595.1| methyltransferase, HemK family [Labrenzia alexandrii DFL-11] gi|222440515|gb|EEE47194.1| methyltransferase, HemK family [Labrenzia alexandrii DFL-11] Length = 280 Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 80/217 (36%), Positives = 118/217 (54%), Gaps = 4/217 (1%) Query: 43 VRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRIL 102 + L + + RILG R+FY L+ T EPRP+TE L+++ L P + + Sbjct: 62 AQRLNGKPVGRILGEREFYGRTFRLNHATLEPRPDTETLIETVLKDCDPT----RPLTMC 117 Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162 D+GTGTGA+ + LL E V VDIS AL A SNA +GV RF ++SD+ ++++ Sbjct: 118 DIGTGTGAIAVTLLAELQKAVMVAVDISEDALGCAVSNAENHGVGARFLPVRSDYAAALQ 177 Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL 222 FD ++SNPPYI + ++ L EV DP ++LDGG DGL YR I + L G Sbjct: 178 HGFDWVISNPPYIRTPVLRELSKEVLQHDPILALDGGADGLEGYRQIVSQAASVLVPGGR 237 Query: 223 CSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRV 259 ++EIG +Q ++ ++ +D G DRV Sbjct: 238 IALEIGRDQGEELKNQLRHHGFEAIDIIQDLGRRDRV 274 >gi|197335225|ref|YP_002155530.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Vibrio fischeri MJ11] gi|197316715|gb|ACH66162.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Vibrio fischeri MJ11] Length = 284 Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 89/258 (34%), Positives = 128/258 (49%), Gaps = 9/258 (3%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ LC V ++ P+ ++ D + + R L E I I+G+R+F+++ L Sbjct: 27 DAAVLLCHVLDKPRSYLLTWPEKIVSDEELGNFNALLERRLAGEPIAYIVGYREFWSLPL 86 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 +S T PRP+TE LV+ AL P + ILDLGTGTGA+ LA+ E P + Sbjct: 87 KVSPTTLIPRPDTERLVEVALDHLTPNAQS-----ILDLGTGTGAIALAIASEMPTLNVI 141 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS--SVEGLFDVIVSNPPYIESVIVDCL 183 GVD A+E+AK NA N ++ + Q WF S+ FD+IVSNPPYI+ Sbjct: 142 GVDYQDDAVELAKENAKINHIN-NVEFRQGSWFEPISLSDKFDIIVSNPPYIDGNDPHLS 200 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 +VR F+P+ +L +G S I +L G +E G+ Q + FE Sbjct: 201 EGDVR-FEPQTALVAEQNGFSDLIHIMQHGREYLLNGGWLMMEHGFEQGEQLRHFFEEHG 259 Query: 244 LFLVNAFKDYGGNDRVLL 261 V +DY GNDRV L Sbjct: 260 YINVKTEQDYTGNDRVTL 277 >gi|55820817|ref|YP_139259.1| protoporphyrinogen oxidase [Streptococcus thermophilus LMG 18311] gi|55736802|gb|AAV60444.1| protoporphyrinogen oxidase [Streptococcus thermophilus LMG 18311] Length = 277 Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 83/230 (36%), Positives = 124/230 (53%), Gaps = 14/230 (6%) Query: 37 FLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR 96 L + + H+ ILG+ +F+ +R + PRPETE LVD LA + P E Sbjct: 54 LLAHIFTQLTAHKPAQYILGYEEFHGLRFQVDERVLIPRPETEELVDLILAEN-PNTE-- 110 Query: 97 DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 +++LD+GTG+GA+ ++L K P ++ D+S AL +AK NA N V F + +D Sbjct: 111 --LKVLDIGTGSGAIAVSLKKSRPMWQVTASDLSADALVLAKDNAKLNRVDISF--VLAD 166 Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216 F +V G FD+IVSNPPYI D +GL V +P+++L DGL+ YR I + ++ Sbjct: 167 VFENVSGCFDIIVSNPPYISENDKDEVGLNVLTSEPKMALFADEDGLAIYRQILEDADKY 226 Query: 217 LNKDGLCSVEIGYNQKVDVVRI----FESRKLFLVNAFKDYGGNDRVLLF 262 LN G EIGY Q D+ ++ F + V KD G DR+++ Sbjct: 227 LNPQGKLYFEIGYKQGEDLRKLLSLHFPDKH---VRVLKDQFGQDRMVVM 273 >gi|253990003|ref|YP_003041359.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253781453|emb|CAQ84616.1| protein methyltranferase hemk (protein-glutamine n methyltransferase) [Photorhabdus asymbiotica] Length = 283 Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 99/260 (38%), Positives = 137/260 (52%), Gaps = 12/260 (4%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 RD+ L VT S ++ ++ + Q L + R K E I I G R+F+++ Sbjct: 23 RDAEILLGFVTRHSRTYILAFGETQISPEQFSQLETLLARRAKGEPIAYITGEREFWSLS 82 Query: 65 LTLSSDTFEPRPETELLVDSAL-AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 LT+S T PRP+TE LV+ AL SL RILDLGTGTGA+ LA+ E + Sbjct: 83 LTVSPATLIPRPDTECLVEKALECLSL------TPCRILDLGTGTGAIALAIASERSDCQ 136 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDC 182 GVDI+ A+ +A+ NA + + D L S+WFSS+ FD+IVSNPPYI+ Sbjct: 137 VTGVDINPDAVMLAQGNAEKLKI-QNVDFLNSNWFSSLNNQQFDMIVSNPPYIDEADPHL 195 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR-IFES 241 +VR F+P +L G + +TI D L DG +E G+ Q DVVR +F Sbjct: 196 FQGDVR-FEPDSALIAAEQGTADLKTIIDLSRNFLLPDGWLLLEHGWKQG-DVVRSLFSE 253 Query: 242 RKLFLVNAFKDYGGNDRVLL 261 V F+DYGGN+R+ L Sbjct: 254 SGYQQVATFQDYGGNERITL 273 >gi|227111331|ref|ZP_03824987.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 281 Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 90/258 (34%), Positives = 139/258 (53%), Gaps = 8/258 (3%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 RD+ L VTG S ++ ++ L+ ++ LT ++R + E I ++G R+F+++ Sbjct: 22 RDAEILLGFVTGKSRTFLLAFGETELNTAEQQQLTELLLRREQGEPIAYLIGVREFWSLP 81 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L +S T PRP+TE LV+ AL LP+ +LDLGTGTGA+ LAL E + Sbjct: 82 LAVSPATLIPRPDTECLVEQAL-LRLPQTP----CAVLDLGTGTGAIALALASERHDCRV 136 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCL 183 GVD+ A+ +A NA G+ L W+S ++ F +I SNPPYI++ V Sbjct: 137 TGVDVQPDAVALATKNAQQLGLG-NVHFLSGSWYSPLDHTRFALIASNPPYIDADDVHLS 195 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 +VR F+P +L +GL+ RTI + +L+ DG +E G+ Q V ++ +R Sbjct: 196 QGDVR-FEPASALIAADNGLADLRTIIESAPHYLDDDGWLLLEHGWQQADAVRQLLHARG 254 Query: 244 LFLVNAFKDYGGNDRVLL 261 + +DYGGNDRV L Sbjct: 255 FTQIETCQDYGGNDRVSL 272 >gi|323704814|ref|ZP_08116391.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Thermoanaerobacterium xylanolyticum LX-11] gi|323535740|gb|EGB25514.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Thermoanaerobacterium xylanolyticum LX-11] Length = 279 Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 95/260 (36%), Positives = 142/260 (54%), Gaps = 14/260 (5%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESI--HRILGWRDFYNV 63 ++ L + G+ +IV+ D L + F + L+ + + I+G + F + Sbjct: 24 EAEGLLSFLLGVGREYIIVNRDKEL--SENIFERYKGLLDLRKDGMPYQYIVGKKHFMGL 81 Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 +S + PR +TE+LV+ L R++K DVV LD+GTG+GA+ +++ K K Sbjct: 82 IFKVSPNVLIPRNDTEVLVEEVLK----RLQKNDVV--LDIGTGSGAIAVSIAKYKDV-K 134 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVD 181 VDIS AL +A+ NA NGV ++ L+SD FSSV + FDVIVSNPPYI S +D Sbjct: 135 VYAVDISDDALSVARDNAYENGVLDKIVFLKSDLFSSVPKDVKFDVIVSNPPYIRSGDID 194 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 L EV+ +P+I+LDGG DGL YR I ++ G+ + E+GY++ DV RI Sbjct: 195 KLQEEVKK-EPKIALDGGEDGLLFYRKIVRDSKEYIKSSGIIAFEVGYDEAGDVSRILLD 253 Query: 242 RKLFLVNAFKDYGGNDRVLL 261 + KD G DRV+L Sbjct: 254 GGYGNIEIVKDLQGIDRVVL 273 >gi|313905738|ref|ZP_07839098.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Eubacterium cellulosolvens 6] gi|313469445|gb|EFR64787.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Eubacterium cellulosolvens 6] Length = 282 Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 85/217 (39%), Positives = 117/217 (53%), Gaps = 8/217 (3%) Query: 44 RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103 R L H + I G F ++ D PR +TE+LV+ AL P + RILD Sbjct: 68 RRLGHLPVQHITGEAWFCGYSFYVTEDVLIPRQDTEVLVEEALRVLRPGM------RILD 121 Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVE 162 + TG+G + L+LLK G VD+S AL +A+ N G++E + L SD F VE Sbjct: 122 MCTGSGCILLSLLKGREV-TGTAVDLSPAALAVAEENRKRLGIAEDQVKFLHSDLFEKVE 180 Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL 222 G +D+IV+NPPYI + + L EVRD +P ++LDG DGL R IA+ +L KD + Sbjct: 181 GCYDMIVTNPPYIPTEVCQELDPEVRDHEPMMALDGREDGLYFERKIAEDAKAYLKKDAM 240 Query: 223 CSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRV 259 +EIGY+Q + I S V +D GGNDRV Sbjct: 241 IFMEIGYDQGDAMREILLSLGYKDVRIVRDLGGNDRV 277 >gi|312172220|emb|CBX80477.1| K02493 methyltransferase [Erwinia amylovora ATCC BAA-2158] Length = 295 Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 92/256 (35%), Positives = 135/256 (52%), Gaps = 8/256 (3%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 RD+ L VTG S +I DSVLD L + R E I + G R+F+++ Sbjct: 22 RDAEILLQLVTGKSRAWLIGFDDSVLDAAALEQLHALLTRRAAGEPIAYLTGEREFWSLS 81 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L ++ DT PRP++E+LV+ ALA LP ILDLGTG+GA+ LAL E P + Sbjct: 82 LNVTPDTLIPRPDSEVLVEQALAH-LPDA----ACSILDLGTGSGAIALALASERPDCQI 136 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183 G+D A+ +A+ NA G++ + +WFS+++ F VIVSNPPYI++ Sbjct: 137 SGIDRIPAAVALAQHNAARLGLANA-TFMPGNWFSALKPQQFAVIVSNPPYIDAADKHLS 195 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 +VR F+P +L G GL+ + IA ++L G +E G+ Q + +I Sbjct: 196 QGDVR-FEPASALVAGDGGLADIKIIAAQAGQYLANGGWLLLEHGWQQGAQIRQILSDNH 254 Query: 244 LFLVNAFKDYGGNDRV 259 + +DYGGNDRV Sbjct: 255 YCRIETCQDYGGNDRV 270 >gi|254230551|ref|ZP_04923919.1| protein methyltransferase HemK (Protein-glutamine N-methyltransferase hemK) (Protein-(glutamine-N5) MTase hemK) [Vibrio sp. Ex25] gi|262394971|ref|YP_003286825.1| Polypeptide chain release factor methylase [Vibrio sp. Ex25] gi|151936923|gb|EDN55813.1| protein methyltransferase HemK (Protein-glutamine N-methyltransferase hemK) (Protein-(glutamine-N5) MTase hemK) [Vibrio sp. Ex25] gi|262338565|gb|ACY52360.1| Polypeptide chain release factor methylase [Vibrio sp. Ex25] Length = 284 Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 91/260 (35%), Positives = 132/260 (50%), Gaps = 9/260 (3%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ LC V G ++ P+ L+ Q+ + R L E + I+G R+F+++ Sbjct: 29 DAAVLLCHVLGKPRTYLLTWPEKALEAEQQAKFNALLERRLAGEPVAYIIGEREFWSLPF 88 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 +S T PRP+TE LV+ AL + ILDLGTGTGA+ +AL E P + + Sbjct: 89 KVSPSTLIPRPDTERLVEVALDKTY-----EQTGPILDLGTGTGAIAIALASEMPTRQVM 143 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGL-FDVIVSNPPYIESVIVDCL 183 GVD+ +A +A+ NA + + Q WF + EG F +IVSNPPYI+ Sbjct: 144 GVDLKQEAKALAEYNAEQLNI-KNVTFAQGSWFEPITEGTKFALIVSNPPYIDEKDPHLS 202 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 +VR F+P+ +L +GL+ R I+D ++L G + E GY+Q V I Sbjct: 203 QGDVR-FEPKSALVAKENGLADIRHISDLARQYLEVGGWLAFEHGYDQGDAVREIMRGFG 261 Query: 244 LFLVNAFKDYGGNDRVLLFC 263 V KDYGGNDRV L C Sbjct: 262 YQQVATEKDYGGNDRVTLGC 281 >gi|319779046|ref|YP_004129959.1| Methylase of polypeptide chain release factor [Taylorella equigenitalis MCE9] gi|317109070|gb|ADU91816.1| Methylase of polypeptide chain release factor [Taylorella equigenitalis MCE9] Length = 275 Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 90/261 (34%), Positives = 137/261 (52%), Gaps = 17/261 (6%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 +S L V G+ + V D ++ + Q+ + R L+ E I ++G R+F + L Sbjct: 19 ESQIILAHVLGVDRVWLFVHDDVLICEEQKLEFDTLVQRRLEGEPIAYLVGSREFMGLEL 78 Query: 66 TLSSDTFEPRPETELLVDSALAF--SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 + + PRP+TELLV+ AL F + P RILDLGTG+GA+ +++ P + Sbjct: 79 NVDNSVLIPRPDTELLVECALDFLKTTPT-----GARILDLGTGSGAIAISIANFMPKCE 133 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVIV 180 VDIS +AL++A NA +GV +F + WF ++ G FD+IVSNPPYI S Sbjct: 134 VYAVDISKEALKVAYLNAKNHGVHIKF--FEGSWFDALPYDVGTFDLIVSNPPYIAS--- 188 Query: 181 DCLGLEVRD--FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238 D + L++ D ++P +L GG DGLS Y I V ++ E G+ Q ++ RI Sbjct: 189 DDIHLQLGDVRYEPITALVGGNDGLSEYIKIMKQVHDFIHSGSAIMFEHGWTQGAELRRI 248 Query: 239 FESRKLFLVNAFKDYGGNDRV 259 E +N KD G++RV Sbjct: 249 LEQGHCHKINTHKDLAGHERV 269 >gi|114768931|ref|ZP_01446557.1| HemK [alpha proteobacterium HTCC2255] gi|114549848|gb|EAU52729.1| HemK [alpha proteobacterium HTCC2255] Length = 277 Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 82/230 (35%), Positives = 122/230 (53%), Gaps = 8/230 (3%) Query: 31 DDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSL 90 DD +F T I + L+ + I +I+G R F+ + +S + +PRP+TE L++ L+ Sbjct: 50 DDIYNYFKT-LINKRLEFQPISQIIGERYFWKNKFIVSPNVLDPRPDTETLIEHTLS--- 105 Query: 91 PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150 + ILDLGTG+G + L+LL E GVG+D S AL +AK NA +S+R Sbjct: 106 ----QGKFYNILDLGTGSGCIILSLLDEYKDAIGVGIDKSEDALNVAKQNANLLSLSQRV 161 Query: 151 DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210 +W ++ FD+I+SNPPYI + L V +++PRI+L DGL YR I Sbjct: 162 SFNLGNWCEGIKEKFDLIISNPPYISENDMKILSKSVLNWEPRIALTPEGDGLGAYRHIL 221 Query: 211 DGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 DG L +G +EIGY+Q V + ++ + KD DRVL Sbjct: 222 DGAKNLLIPNGKLILEIGYDQGKKVTHLLKNHGYKDIKLVKDINNKDRVL 271 >gi|89094906|ref|ZP_01167838.1| Methylase of polypeptide chain release factor [Oceanospirillum sp. MED92] gi|89080863|gb|EAR60103.1| Methylase of polypeptide chain release factor [Oceanospirillum sp. MED92] Length = 283 Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 89/259 (34%), Positives = 129/259 (49%), Gaps = 17/259 (6%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D LC V + P+ L ++ L + R LK E + I+G R F++ L Sbjct: 23 DMQYLLCHVLDKPESYLFTWPERELQPGEQESLEQLLQRRLKGEPVAHIIGKRGFWSFEL 82 Query: 66 TLSSDTFEPRPETELLVDSALAF-SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 +S T PRP+TE+LV+ AL SLP R++DLGTGTGAV LAL KE+P ++ Sbjct: 83 EVSPHTLIPRPDTEVLVEKALELCSLP------AARVVDLGTGTGAVALALAKENPGWEV 136 Query: 125 VGVDISCKALEIAKSN----AVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180 D +A E+A+ N +TN LQ W+ G FD+IVSNPPYI+ Sbjct: 137 FASDYVKEAAELAERNRQRLHITN-----MQVLQGSWYEPHSGRFDMIVSNPPYIDPEDP 191 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 +VR F+P +L G++ IA LNK+G+ + E G++Q + + Sbjct: 192 HLDQGDVR-FEPLSALTAENQGMADIELIAKQGRNFLNKNGVLAFEHGFDQGPICRNLLQ 250 Query: 241 SRKLFLVNAFKDYGGNDRV 259 + V +DYG N+RV Sbjct: 251 TLGYLEVGTQRDYGQNERV 269 >gi|331002271|ref|ZP_08325790.1| protein-(glutamine-N5) methyltransferase [Lachnospiraceae oral taxon 107 str. F0167] gi|330411365|gb|EGG90781.1| protein-(glutamine-N5) methyltransferase [Lachnospiraceae oral taxon 107 str. F0167] Length = 275 Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 84/224 (37%), Positives = 129/224 (57%), Gaps = 13/224 (5%) Query: 38 LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97 L + + L + + I+ F + L + + PR +TE+LV+ L +K Sbjct: 58 LKEYVEKRLTNMPVQYIVNKAYFCGLPLYVDENVLIPRFDTEVLVEEVLNLG----DKNK 113 Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 +ILD+ TG+GA+ +AL K F + +DIS +AL+IAK NA + + L+SD Sbjct: 114 --KILDVCTGSGAIAIALKKLGKFERVDALDISEEALKIAKKNA--KALECDINFLKSDM 169 Query: 158 FSSV--EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215 FSS+ E +D+IVSNPPYI+S IVD L +V+DF+PR++LDG IDG+ Y+ I Sbjct: 170 FSSLTSENKYDIIVSNPPYIQSHIVDSLERQVKDFEPRLALDGDIDGMKFYKIIEKNFMN 229 Query: 216 HLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRV 259 L+ G+ +EIGY++ D+ +FE +K+ + KD G DRV Sbjct: 230 FLSPGGILGLEIGYDEASDIKNLFEDKKVIIK---KDLAGLDRV 270 >gi|296101960|ref|YP_003612106.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295056419|gb|ADF61157.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 276 Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 94/258 (36%), Positives = 133/258 (51%), Gaps = 8/258 (3%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 RD+ L VTG + ++ ++ L Q L+ + R E + ++G R+F+++ Sbjct: 22 RDAEILLEYVTGKARTYLLAFGETELTVEQEAQLSALLARRKTGEPVAHLVGEREFWSLP 81 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L +S+ T PRP+TE LV+ ALA LP RILDLGTGTGA+ LAL E P Sbjct: 82 LFVSAATLIPRPDTECLVEQALA-RLPAAAS----RILDLGTGTGAIALALATERPDCAV 136 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183 VD+ A+ +A+ N GV+ LQS WFS++E F +IVSNPPYI+ Sbjct: 137 TAVDVMPDAVALAQRNVERLGVT-NVTVLQSSWFSALEKQTFAMIVSNPPYIDEHDPHLA 195 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 +VR F+P +L G GL+ I +HL G VE G+ Q V +F Sbjct: 196 QGDVR-FEPLTALVAGNAGLADLEHIVTTSRQHLLPGGWLLVEHGWTQGEAVRGLFRQTG 254 Query: 244 LFLVNAFKDYGGNDRVLL 261 V +DYGGN+R+ L Sbjct: 255 YAAVETCRDYGGNERLTL 272 >gi|330811718|ref|YP_004356180.1| methyltransferase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327379826|gb|AEA71176.1| Putative methyltransferase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 276 Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 85/244 (34%), Positives = 129/244 (52%), Gaps = 18/244 (7%) Query: 26 PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85 P+ ++ + + R E + ILG + F+ + L ++ T PRP+TELLV++A Sbjct: 42 PERIVPSEAALLFSEYLRRRRSGEPVAYILGQQGFWKLDLEVAPHTLIPRPDTELLVETA 101 Query: 86 LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145 LA LP R+LDLGTG+GA+ LAL E P +K VD +A+ +A+ N Sbjct: 102 LAL-LPATP----ARVLDLGTGSGAIALALASERPAWKVTAVDRVLEAVALAERN----- 151 Query: 146 VSERFD-----TLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199 +R D L S WFS++E F++I+SNPPYI + + +VR F+P +L G Sbjct: 152 -RQRLDLHNVTVLSSHWFSALEDTRFELIISNPPYIAASDPHLIEGDVR-FEPASALVAG 209 Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRV 259 DGL R I HL+ G +E GY+Q V + ++ V++ KD GG++R+ Sbjct: 210 PDGLDDLRQIVAQAPAHLDPGGWLMLEHGYDQAEAVRDLLRTQGFVEVHSRKDLGGHERI 269 Query: 260 LLFC 263 L C Sbjct: 270 SLGC 273 >gi|260220344|emb|CBA27787.1| Protein hemK homolog [Curvibacter putative symbiont of Hydra magnipapillata] Length = 292 Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 83/230 (36%), Positives = 116/230 (50%), Gaps = 9/230 (3%) Query: 29 VLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAF 88 +L ++ LT R L E + ++G ++FY + L +S+D PRP+TE LV+ + Sbjct: 61 LLSEQALITLTRLANRRLAGEPVAYLVGHKEFYGLNLQVSADVLVPRPDTETLVE----W 116 Query: 89 SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148 +L +E R++DLGTG+GA+ LAL P + VD S AL +A+ NA G+ Sbjct: 117 ALETLEPTPHARVVDLGTGSGAIALALKATRPELQVEAVDFSHAALAVAQGNAQRLGLEV 176 Query: 149 RFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208 F Q W S EG F +IVSNPPYI D L F+PR +L G DGL RT Sbjct: 177 AFG--QGSWLGSAEGKFQLIVSNPPYIRE---DDEHLPALRFEPRQALTAGTDGLDDIRT 231 Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258 I HL G E GY+Q DV + + V + +D G +R Sbjct: 232 IIRQAPEHLLAGGWLLFEHGYDQAGDVRGLLAAAGFSEVQSRRDLAGIER 281 >gi|262404523|ref|ZP_06081078.1| Polypeptide chain release factor methylase [Vibrio sp. RC586] gi|262349555|gb|EEY98693.1| Polypeptide chain release factor methylase [Vibrio sp. RC586] Length = 286 Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 93/261 (35%), Positives = 133/261 (50%), Gaps = 15/261 (5%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ LC V ++ PD L++ L + R + E + ILG R+F+++ L Sbjct: 27 DAAVLLCHVLAKPRSYLLTWPDKTLEESALVSLNALLARRITGEPVAYILGEREFWSLPL 86 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV--RILDLGTGTGAVCLALLKESPFFK 123 +S T PRP+TE LV+ AL EK ++ +LDLGTGTGA+ LAL E P + Sbjct: 87 KVSPSTLIPRPDTERLVELAL-------EKAALIEGELLDLGTGTGAIALALASELPLRR 139 Query: 124 GVGVDISCKALEIAKSNAVTNGV-SERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIV 180 G+D+ +A E+A+ NA + + +F LQ WFS + G F +IVSNPPYIE Sbjct: 140 VTGIDLRPEAAELAQENATRLSILNTQF--LQGSWFSPLAGGTKFALIVSNPPYIEENDP 197 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 +VR F+P+ +L +GL+ R I+ L + G E GY+Q V I Sbjct: 198 HLNQGDVR-FEPKSALVAEENGLADIRYISTHAPHFLLEGGWLLFEHGYDQGEAVRTILR 256 Query: 241 SRKLFLVNAFKDYGGNDRVLL 261 V +DY GNDRV L Sbjct: 257 DLGYQSVTTEQDYAGNDRVTL 277 >gi|269965454|ref|ZP_06179573.1| HemK protein [Vibrio alginolyticus 40B] gi|269829933|gb|EEZ84163.1| HemK protein [Vibrio alginolyticus 40B] Length = 284 Score = 133 bits (335), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 91/260 (35%), Positives = 132/260 (50%), Gaps = 9/260 (3%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ LC V G ++ P+ L+ Q+ + R L E + I+G R+F+++ Sbjct: 29 DAAVLLCHVLGKPRTYLLTWPEKALEAEQQAKFDALLERRLTGEPVAYIIGEREFWSLPF 88 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 +S T PRP+TE LV+ AL + ILDLGTGTGA+ +AL E P + + Sbjct: 89 KVSPSTLIPRPDTERLVEVALDKTY-----EQTGPILDLGTGTGAIAIALASEMPKRQVM 143 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGL-FDVIVSNPPYIESVIVDCL 183 GVD+ +A +A+ NA + + Q WF + EG F +IVSNPPYI+ Sbjct: 144 GVDLKQEAKALAEYNAEQLNI-KNVTFAQGSWFEPITEGTKFALIVSNPPYIDEKDPHLS 202 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 +VR F+P+ +L +GL+ R I+D ++L G + E GY+Q V I Sbjct: 203 QGDVR-FEPKSALVAKENGLADIRHISDLARQYLEVGGWLAFEHGYDQGEAVREIMRGFG 261 Query: 244 LFLVNAFKDYGGNDRVLLFC 263 V KDYGGNDRV L C Sbjct: 262 YQQVATEKDYGGNDRVTLGC 281 >gi|268317361|ref|YP_003291080.1| modification methylase, HemK family [Rhodothermus marinus DSM 4252] gi|262334895|gb|ACY48692.1| modification methylase, HemK family [Rhodothermus marinus DSM 4252] Length = 304 Score = 133 bits (334), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 86/261 (32%), Positives = 128/261 (49%), Gaps = 7/261 (2%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A R++ LC V G S Q+ P+ +D +R + R L+ E + +LG+ +F Sbjct: 37 ARRNAEWMLCEVLGCSRAQLYAYPERPVDAARRARFAELLARRLRREPLQYVLGYVEFLG 96 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 +RL + PRPETE L + L ++ R+LD+GTG+G + LA+ Sbjct: 97 LRLEVGPGVLVPRPETEWLTERVLQ----ELQSTPGPRVLDVGTGSGCIALAIKHHRSDA 152 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVI 179 DIS +AL IA+ NA G+ + D L + +V G FD+IVSNPPY+ Sbjct: 153 DVWACDISPEALSIARRNAERLGLQVHWVEADVLADSFPENVPGPFDLIVSNPPYLALHE 212 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 D L EVRD++P ++L G D L YR +A L G + E+ + DVV +F Sbjct: 213 ADELPPEVRDYEPPVALYAGEDPLRFYRALARHGHVLLKPGGRLACEVHAHYGTDVVALF 272 Query: 240 ESRKLFLVNAFKDYGGNDRVL 260 E+ V D GN R++ Sbjct: 273 EACGYEAVRLECDLAGNPRLV 293 >gi|19704666|ref|NP_604228.1| methyltransferase [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|19714974|gb|AAL95527.1| Methyltransferase [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] Length = 354 Score = 133 bits (334), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 75/222 (33%), Positives = 129/222 (58%), Gaps = 7/222 (3%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101 ++R+ K + + ILG +FY + +S PR +TE+LV+ + + +E+ + I Sbjct: 115 VLRAKKRKPLQYILGEWEFYGLPFKMSEGVLIPRADTEILVEQCIQL-MREVEEPN---I 170 Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 LD+G+G+GA+ +A+ E G+DI+ KA+++A N + N + E + ++S+ F + Sbjct: 171 LDIGSGSGAISIAVANELKSSSVTGIDINEKAIKLAIENKILNKI-ENVNFIESNLFGKL 229 Query: 162 EGLF--DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 + F D+IVSNPPYI + L EV++++P+ +L DGL Y+ I+ +L Sbjct: 230 DKDFKYDLIVSNPPYISKDEYETLMPEVKNYEPQNALTDLGDGLHFYKEISKLAGEYLKD 289 Query: 220 DGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 G + EIGYNQ DV +I + +++ KDYGGNDRV++ Sbjct: 290 TGYLAFEIGYNQAKDVSKILQDNNFAILSIVKDYGGNDRVII 331 >gi|257466435|ref|ZP_05630746.1| methyltransferase [Fusobacterium gonidiaformans ATCC 25563] gi|315917591|ref|ZP_07913831.1| polypeptide chain release factor methyltransferase HemK [Fusobacterium gonidiaformans ATCC 25563] gi|313691466|gb|EFS28301.1| polypeptide chain release factor methyltransferase HemK [Fusobacterium gonidiaformans ATCC 25563] Length = 368 Score = 133 bits (334), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 81/221 (36%), Positives = 119/221 (53%), Gaps = 6/221 (2%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101 I R + + ILG +FY PR +TE+LV+ A SL +++ +I Sbjct: 146 IQRGKFRKPLQYILGKWEFYGYEFITDERALIPRADTEILVEQAKILSL----EKENPKI 201 Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 LD+GTGTGA+ + L KE P + +G+DIS +AL +AK N V LQS+ F + Sbjct: 202 LDIGTGTGAIAITLAKEVPEAEVLGIDISERALSLAKENKEYQFVR-NVSFLQSNLFEKL 260 Query: 162 EGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220 EG FD+IVSNPPYI + L EV++++P+ +L DG S Y+ I + +LN+ Sbjct: 261 EGKSFDIIVSNPPYIPQEEYEDLMPEVKNYEPKNALTDAGDGYSFYQRIIQEANGYLNEK 320 Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 G E+GY Q V + E K + +DY G+ RV+L Sbjct: 321 GYLLFEVGYQQAEQVKQWMEEEKFEDLYIAEDYAGHQRVVL 361 >gi|325568364|ref|ZP_08144731.1| protein-(glutamine-N5) methyltransferase [Enterococcus casseliflavus ATCC 12755] gi|325158133|gb|EGC70286.1| protein-(glutamine-N5) methyltransferase [Enterococcus casseliflavus ATCC 12755] Length = 285 Score = 133 bits (334), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 77/217 (35%), Positives = 120/217 (55%), Gaps = 8/217 (3%) Query: 46 LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLG 105 L+HE +LG+ +FY RL ++ T PRPETE LV++ LA ++ +R++D+G Sbjct: 65 LQHEPPQYLLGYEEFYGHRLKVTPATLIPRPETEELVENCLA----KLPADQPLRVVDIG 120 Query: 106 TGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGL 164 TGTGA+ +AL P + VD+S +AL +AK NA G RF Q D V + Sbjct: 121 TGTGAIAIALKLARPQWSVSAVDLSAEALAVAKENATALGAEIRF--FQGDTLEPVADQQ 178 Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224 +D+IVSNPPYI + + + VR+ +P+++L GL+ Y+ +A + L G + Sbjct: 179 WDLIVSNPPYISAEEWPLMDISVREKEPKMALFAQEQGLAIYKQLAQQAPKCLAPSGQMA 238 Query: 225 VEIGYNQKVDVVRIFESR-KLFLVNAFKDYGGNDRVL 260 +EIG+ Q V ++F + V KD G DR++ Sbjct: 239 LEIGFQQGQAVQQLFAAAFPNKEVTVVKDLAGQDRMV 275 >gi|269138758|ref|YP_003295459.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Edwardsiella tarda EIB202] gi|267984419|gb|ACY84248.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Edwardsiella tarda EIB202] gi|304558751|gb|ADM41415.1| hypothetical protein ETAF_1303 [Edwardsiella tarda FL6-60] Length = 279 Score = 133 bits (334), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 90/258 (34%), Positives = 134/258 (51%), Gaps = 8/258 (3%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 RD+ L VTG ++ ++ L Q LT+ + R + E + ++G R+F+++ Sbjct: 22 RDAEILLEYVTGKGRSFLLAFGETRLTAAQLTQLTSLLARREQGEPVAYLIGEREFWSLP 81 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L +S T PRP+TE LV+ AL LP +I+DLGTGTGA+ LAL E P + Sbjct: 82 LAVSPATLIPRPDTECLVEQAL-MRLPAAP----AQIVDLGTGTGAIALALASERPDCRV 136 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183 V+ + A+ +A+ NA G+S R + LQ WF+ + G F +IVSNPPYI++ Sbjct: 137 SAVEFNPDAVALAQHNAARLGLS-RVEILQGSWFTPLAGRRFTLIVSNPPYIDAADGHLS 195 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 +VR F+P +L GL+ R IA HL G +E G+ Q V + Sbjct: 196 QGDVR-FEPASALVAAEQGLADLRAIARQAPDHLEPGGWLLLEHGWQQGAAVRALLTEYG 254 Query: 244 LFLVNAFKDYGGNDRVLL 261 V + +DYG N+RV L Sbjct: 255 FCCVESVRDYGDNERVTL 272 >gi|291612729|ref|YP_003522886.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Sideroxydans lithotrophicus ES-1] gi|291582841|gb|ADE10499.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Sideroxydans lithotrophicus ES-1] Length = 286 Score = 133 bits (334), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 86/241 (35%), Positives = 130/241 (53%), Gaps = 11/241 (4%) Query: 22 VIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELL 81 ++ P+ VLD Q+ N + R L+ E + ILG R+F+ + ++ T PRPETELL Sbjct: 45 LLAHPEQVLDATQQASYANLLQRRLQGEPVAHILGEREFFGLNFKVTPATLIPRPETELL 104 Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 V+ +L RI R+LD+GTG+GA+ L++ P + V VD S ALE+A+ NA Sbjct: 105 VE----LALQRIPAHGHFRVLDMGTGSGAIALSIAHARPEAEVVAVDASGAALEVARENA 160 Query: 142 VTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200 V G+ ++SDW++++ + + +IVSNPPYIE+ ++R F+P +L G Sbjct: 161 VRLGI-RNATFIRSDWYAALDDKRYGLIVSNPPYIETGDAHLTQGDLR-FEPPSALASGA 218 Query: 201 DGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAF--KDYGGNDR 258 DG+ R I R L +E GY Q + VR+ + F N F KD G +R Sbjct: 219 DGMDDIRRIVGQAHRFLELGSWLLLEHGYEQ-AETVRLLLGQNGF-ANVFSVKDIAGIER 276 Query: 259 V 259 V Sbjct: 277 V 277 >gi|262170843|ref|ZP_06038521.1| Polypeptide chain release factor methylase [Vibrio mimicus MB-451] gi|261891919|gb|EEY37905.1| Polypeptide chain release factor methylase [Vibrio mimicus MB-451] Length = 286 Score = 133 bits (334), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 94/261 (36%), Positives = 133/261 (50%), Gaps = 15/261 (5%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ LC V ++ PD L++ L + R + E I ILG R+F+++ L Sbjct: 27 DAAVLLCHVLAKPRSYLLTWPDKTLEEPALVSLNALLARRMAGEPIAYILGEREFWSLPL 86 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV--RILDLGTGTGAVCLALLKESPFFK 123 +S T PRP+TE LV+ AL EK ++ +LDLGTGTGA+ LAL E P + Sbjct: 87 KVSPSTLIPRPDTERLVELAL-------EKAALIEGELLDLGTGTGAIALALASELPLRR 139 Query: 124 GVGVDISCKALEIAKSNAVTNGV-SERFDTLQSDWFSSVE--GLFDVIVSNPPYIESVIV 180 G+D+ +A E+A+ NA + + +F LQ WFS + F +IVSNPPYIE Sbjct: 140 VTGIDLRPEAAELAQENATRLSILNTQF--LQGSWFSPLADGTKFALIVSNPPYIEENDP 197 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 +VR F+P+ +L +GL+ R I+ R L + G E GY+Q V I Sbjct: 198 HLNLGDVR-FEPKSALVAEENGLADIRYISTHAPRFLLEGGWLLFEHGYDQGEAVRTILR 256 Query: 241 SRKLFLVNAFKDYGGNDRVLL 261 V +DY GNDRV L Sbjct: 257 ELGYQSVTTEQDYAGNDRVTL 277 >gi|295697769|ref|YP_003591007.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacillus tusciae DSM 2912] gi|295413371|gb|ADG07863.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacillus tusciae DSM 2912] Length = 296 Score = 133 bits (334), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 80/235 (34%), Positives = 123/235 (52%), Gaps = 7/235 (2%) Query: 10 FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69 + RV G+ + PD VL + + + R + E + I G +FY + L + Sbjct: 29 LIQRVLGVGKAHLYAHPDRVLTQEEERRIAEGVSRRARREPLQYITGVVEFYGLELEVGP 88 Query: 70 DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129 D PRPETE LV+ L + + +R + I D+GTG+GA+ +AL P + VG+D+ Sbjct: 89 DVLIPRPETEGLVERVLGWR--SMWERPL--IADVGTGSGALAVALAHHWPGARIVGIDV 144 Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIVDCLGLE 186 S A ++A N +G+++R +Q D + D++VSNPPYI S +D L E Sbjct: 145 SPGAFQVASRNIRRHGLADRVSLVQGDLLFPLLDHGQRADIVVSNPPYIPSGDIDGLQPE 204 Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 V F+PR +LDGG DGL YR + + L++ G +VE+G Q V R+ E Sbjct: 205 VARFEPRAALDGGGDGLDVYRRLFFQLPEVLSRPGAVAVEVGAGQAGAVRRLLEQ 259 >gi|15893237|ref|NP_360951.1| bifunctional N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase/tRNA (m7G46) methyltransferase [Rickettsia conorii str. Malish 7] gi|229587214|ref|YP_002845715.1| bifunctional N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase/tRNA (m7G46) methyltransferase [Rickettsia africae ESF-5] gi|32129602|sp|Q92G13|HEMK_RICCN RecName: Full=Bifunctional methyltransferase; Includes: RecName: Full=HemK protein homolog; AltName: Full=M.RcoHemKP; Includes: RecName: Full=tRNA (guanine-N(7)-)-methyltransferase; AltName: Full=tRNA(m7G46)-methyltransferase gi|15620455|gb|AAL03852.1| possible protoporphyrinogen oxidase [Rickettsia conorii str. Malish 7] gi|228022264|gb|ACP53972.1| Methylase of polypeptide chain release factors [Rickettsia africae ESF-5] Length = 524 Score = 133 bits (334), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 83/262 (31%), Positives = 132/262 (50%), Gaps = 21/262 (8%) Query: 22 VIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELL 81 ++++ D L++ + + R LKHE I I G ++FY+ ++ PR +TE+L Sbjct: 43 LLINLDEQLNEAKIEAFEKLLARRLKHEPIVYITGVKEFYSREFIVNKHVLIPRSDTEVL 102 Query: 82 VDSALAFSL------------PRIEKRDV--------VRILDLGTGTGAVCLALLKESPF 121 VD P D+ + IL+LGTG+G + ++LL E P Sbjct: 103 VDVVFQCHSRESGNPEKKQPNPCFRGNDISENCNDKFLNILELGTGSGCIAISLLCELPN 162 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIV 180 + DIS A++I KSNA V++R + S+WF ++E FD IVSNPPYI Sbjct: 163 ANVIATDISLDAIDIIKSNAAKYEVTDRIQIIHSNWFENIETQKFDFIVSNPPYIAHSEK 222 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 + +E +++P I+L DGL Y IA+ + L +G +EIG+ Q+ V +IF Sbjct: 223 SEMAIETINYEPSIALFAEKDGLQAYFLIAENAKQFLKPNGKIILEIGFKQEEAVTQIFL 282 Query: 241 SRKLFLVNAFKDYGGNDRVLLF 262 + + +KD G+ RV+LF Sbjct: 283 DHGYNIESVYKDLQGHSRVILF 304 >gi|149907579|ref|ZP_01896326.1| peptide release factor-glutamine N5-methyltransferase [Moritella sp. PE36] gi|149809249|gb|EDM69178.1| peptide release factor-glutamine N5-methyltransferase [Moritella sp. PE36] Length = 279 Score = 132 bits (333), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 90/242 (37%), Positives = 127/242 (52%), Gaps = 14/242 (5%) Query: 27 DSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL 86 D V+DD T I+R E + ILG+R+F+++ L +S+DT PRP+TE+LV+ AL Sbjct: 45 DKVMDDDIIRRFTALIMRRQAGEPVAHILGYREFWSLELEVSADTLIPRPDTEILVEQAL 104 Query: 87 AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146 A +P ++LDLGTGTGA+ LAL ESP ++ A +A+ N G Sbjct: 105 A-CMP----THACQVLDLGTGTGAIALALASESPQATVTAIEYQQGAAALARRNVKRCG- 158 Query: 147 SERFD--TLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202 FD LQ WF ++ FDVIVSNPPYI++ +VR F+P +L +G Sbjct: 159 ---FDVTVLQGSWFEPLKASQRFDVIVSNPPYIDAHDPHLAMGDVR-FEPLTALVAADNG 214 Query: 203 LSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262 L+ + I + L DG VE G+ Q V +F + V KDYG NDR+ + Sbjct: 215 LADLKHIISQGYQFLTVDGWLLVEHGFEQGAAVRALFTASNYHQVVTHKDYGNNDRITVG 274 Query: 263 CR 264 R Sbjct: 275 QR 276 >gi|262372380|ref|ZP_06065659.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Acinetobacter junii SH205] gi|262312405|gb|EEY93490.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Acinetobacter junii SH205] Length = 272 Score = 132 bits (333), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 83/259 (32%), Positives = 137/259 (52%), Gaps = 12/259 (4%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 +++ L + G++S ++ + + L + Q N + R E + + G + F+ + Sbjct: 19 QEAAWLLEHILGINSLELKLRLEQELTEIQEQAYLNGLARIDHGEPLAYVTGSQPFWTLD 78 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L ++ DT PRP+TE+L+++ L ++E ++DLGTGTGA+ LAL E P +K Sbjct: 79 LKVTHDTLVPRPDTEILIETVL-----KLELDSTSNVVDLGTGTGAIALALASERPQWKV 133 Query: 125 VGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDC 182 DI LE+A+ NA+ +G++ +F WF ++E FD+IVSNPPYI+ + Sbjct: 134 TATDIYQPTLEVAQENAIRHGLTHVKFAC--GAWFDALEKQFFDLIVSNPPYIDP---ED 188 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 + +++ +P +L GL+ TI LN +G +E GY+Q V +FE Sbjct: 189 VHMQMLKSEPERALIADKQGLADLETIIVQGKSWLNPNGWIVLEHGYDQGEAVRTMFEKE 248 Query: 243 KLFLVNAFKDYGGNDRVLL 261 + KDYGGNDRV L Sbjct: 249 GFSQIQTIKDYGGNDRVSL 267 >gi|152997600|ref|YP_001342435.1| HemK family modification methylase [Marinomonas sp. MWYL1] gi|150838524|gb|ABR72500.1| modification methylase, HemK family [Marinomonas sp. MWYL1] Length = 282 Score = 132 bits (333), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 90/260 (34%), Positives = 139/260 (53%), Gaps = 12/260 (4%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLD--DRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63 D+ L V +S+ P+ ++ D +RF + R E + +LG + F+N+ Sbjct: 24 DAQLLLAHVLAVSTSYFYTWPEKLVSTSDVERF--NGLLARRELGEPVAYLLGQQAFWNL 81 Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 L ++ T PR +TE LV+ AL+ ++ V RILDLGTGTGA+ L+L E P Sbjct: 82 DLEVAPCTLIPRADTERLVEVALSV----LDISKVNRILDLGTGTGAIALSLASEQPKST 137 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL--FDVIVSNPPYIESVIVD 181 +GVD+ A+ +AK NA+ N +S D LQS WF ++EG FD+IVSNPPYI+ Sbjct: 138 VMGVDLVEDAVALAKRNALRNKLS-NVDFLQSSWFDALEGCEPFDLIVSNPPYIDPDDEH 196 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P+ +L G++ I + + + ++ E GY+Q V + F Sbjct: 197 LSQGDVR-FEPKSALVADNHGMADIEHIIEVAPKFMQQNAYLMFEHGYDQAASVRKCFIE 255 Query: 242 RKLFLVNAFKDYGGNDRVLL 261 V +F+D+GGNDRV + Sbjct: 256 AGFAAVESFQDFGGNDRVTI 275 >gi|91228928|ref|ZP_01262826.1| HemK protein [Vibrio alginolyticus 12G01] gi|91187511|gb|EAS73845.1| HemK protein [Vibrio alginolyticus 12G01] Length = 284 Score = 132 bits (333), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 90/260 (34%), Positives = 132/260 (50%), Gaps = 9/260 (3%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ LC V G ++ P+ L+ Q+ + R L E + I+G R+F+++ Sbjct: 29 DAAVLLCHVLGKPRTYLLTWPEKALEAEQKSQFDALLERRLTGEPVAYIIGEREFWSLPF 88 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 +S T PRP+TE LV+ AL + +LDLGTGTGA+ +AL E P + + Sbjct: 89 KVSPSTLIPRPDTERLVEVALDKTY-----EQTGPVLDLGTGTGAIAIALASEMPKRQVM 143 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGL-FDVIVSNPPYIESVIVDCL 183 GVD+ +A +A+ NA + + Q WF + EG F +IVSNPPYI+ Sbjct: 144 GVDLKQEAKALAEYNAEQLNI-KNVTFAQGSWFEPITEGTKFALIVSNPPYIDEKDPHLS 202 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 +VR F+P+ +L +GL+ R I+D ++L G + E GY+Q V I Sbjct: 203 QGDVR-FEPKSALVAKENGLADIRHISDLARQYLEVGGWLAFEHGYDQGEAVREIMRGFG 261 Query: 244 LFLVNAFKDYGGNDRVLLFC 263 V KDYGGNDRV L C Sbjct: 262 YQQVATEKDYGGNDRVTLGC 281 >gi|224824643|ref|ZP_03697750.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Lutiella nitroferrum 2002] gi|224603136|gb|EEG09312.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Lutiella nitroferrum 2002] Length = 270 Score = 132 bits (333), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 93/258 (36%), Positives = 129/258 (50%), Gaps = 10/258 (3%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 +S L +VTG + +++ P+ L Q R L E I +LG R+FY Sbjct: 16 ESRLLLMQVTGFTPAKLVGYPELELSPVQEAAFAALAERRLSGEPIAYLLGEREFYGRLF 75 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 +S PRPETE LV++ALA R+ R +++DLG G+GA+ + L E+P ++ Sbjct: 76 LVSPAVLIPRPETEHLVEAALA----RV-GRSPAQVVDLGCGSGAIAVTLALEAPHWQVS 130 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIESVIVDCL 183 VD+S AL IA+ NA F Q W++ + +FD+IVSNPPYI + Sbjct: 131 AVDVSDAALAIARQNAARLMAPVTF--FQGSWYAPLPPAAVFDLIVSNPPYIAAADRHLE 188 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 +VR F+PR +L DGLS R IA G L G VE GY+Q V +F + Sbjct: 189 QGDVR-FEPRRALTDEDDGLSCLREIAAGAPERLLPGGWLMVEHGYDQGDAVRALFHAVG 247 Query: 244 LFLVNAFKDYGGNDRVLL 261 L V D G DRV L Sbjct: 248 LAEVETLPDLAGLDRVTL 265 >gi|240147056|ref|ZP_04745657.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Roseburia intestinalis L1-82] gi|257200779|gb|EEU99063.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Roseburia intestinalis L1-82] gi|291538248|emb|CBL11359.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Roseburia intestinalis XB6B4] Length = 281 Score = 132 bits (333), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 81/220 (36%), Positives = 120/220 (54%), Gaps = 8/220 (3%) Query: 41 AIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR 100 A+ + +H + I+G +F ++ ++S+ PR +TE LV+ AL P + + Sbjct: 60 ALRKRAEHVPLQYIVGEAEFMGLKFKVNSNVLIPRQDTETLVEEALKVVKPGM------K 113 Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LDL TG+G + ++++ P +G DIS +AL +AK NA N VS F+ +SD F + Sbjct: 114 VLDLCTGSGCIIVSIVHNVPEVEGTATDISKQALLVAKENAKLNQVSVTFE--RSDLFDN 171 Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220 V G +DVIVSNPPYI + V L EV++F+P +LDG DGL YR I +L Sbjct: 172 VTGTYDVIVSNPPYIRTGEVVKLMPEVQEFEPMEALDGKEDGLYFYRKIIKECKAYLKPG 231 Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 G EIGY+Q V + + V KD NDRV+ Sbjct: 232 GHILFEIGYDQGEAVSGLLKEAGFKNVTVIKDLAHNDRVV 271 >gi|192359316|ref|YP_001981173.1| methyltransferase, HemK family [Cellvibrio japonicus Ueda107] gi|190685481|gb|ACE83159.1| methyltransferase, HemK family [Cellvibrio japonicus Ueda107] Length = 265 Score = 132 bits (333), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 90/255 (35%), Positives = 131/255 (51%), Gaps = 4/255 (1%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D LC + + + PD +L D + R E I I+G R+F+++ L Sbjct: 8 DIELILCHLLQKNRTWLYTWPDHLLADESLRQFETCLARRETGEPIAHIIGEREFWSLPL 67 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 +++ T PRP+TE++V+ LA S V R LDLGTGTGA+ LAL E ++ + Sbjct: 68 LVNNSTLIPRPDTEVVVEQVLA-SFAEDAPTQVRRCLDLGTGTGAIALALANEKKHWQVL 126 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLG 184 VD S A+ +A++N V L SDWFS++ FDVIVSNPPYI+ Sbjct: 127 AVDRSADAVALARTN-VARLRLPNVQVLCSDWFSAIPAQTFDVIVSNPPYIDPQDPHLEQ 185 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 +VR F+PR +L G GL+ I + +L G +E GY+Q V +F + L Sbjct: 186 GDVR-FEPRSALVAGNAGLADIEAILEQAPAYLAVGGWLLIEHGYDQGRAVRNLFCASGL 244 Query: 245 FLVNAFKDYGGNDRV 259 V+ +DY GN+RV Sbjct: 245 VQVSTRRDYAGNERV 259 >gi|114561907|ref|YP_749420.1| modification methylase, HemK family protein [Shewanella frigidimarina NCIMB 400] gi|114333200|gb|ABI70582.1| modification methylase, HemK family protein [Shewanella frigidimarina NCIMB 400] Length = 284 Score = 132 bits (333), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 83/237 (35%), Positives = 127/237 (53%), Gaps = 8/237 (3%) Query: 26 PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85 P+ L Q + I + + I+G R+F+++ ++ T PRP+TE+LV++A Sbjct: 50 PERQLTSEQFKAYSQMIAKRQSGTPVAHIIGEREFWSLPFIVNESTLIPRPDTEILVETA 109 Query: 86 LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145 L S+ R ++LDLGTGTGA+ LAL E P ++ +D +A+E+AK+N Sbjct: 110 LNLSV-----RHNAKVLDLGTGTGAIALALASERPKWRITAIDKVPEAVELAKANRGNLN 164 Query: 146 VSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204 ++E + +QSDWFS+VE FD+IVSNPPYI+ +VR F+P+ +L G +G + Sbjct: 165 LTE-VEIIQSDWFSAVEQRDFDLIVSNPPYIDEADEHLHLGDVR-FEPQSALTAGNEGYA 222 Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 IA+ HL G +E GY Q + V V +D+G NDR L Sbjct: 223 DLYYIAEQARAHLLPGGYLLLEHGYEQAIKVREKLIELGYQNVATVRDFGSNDRCTL 279 >gi|241667854|ref|ZP_04755432.1| HemK family modification methylase [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254876396|ref|ZP_05249106.1| modification methylase [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254842417|gb|EET20831.1| modification methylase [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 285 Score = 132 bits (332), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 85/258 (32%), Positives = 136/258 (52%), Gaps = 12/258 (4%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 D +C V + + ++ D LD+ + I+R L E + ILG++ F+N + Sbjct: 26 HDLQMIICDVLSVDKTYLYLNSDKQLDNAILTKINGKILRLLAGEPLAYILGYKYFWNQK 85 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALLKESPFFK 123 L ++ DT PR +TE++V A L I+ ++ ++ILDLG G+GA+ LAL E P + Sbjct: 86 LYVTKDTLIPRADTEVIV----AAVLDDIQDKNAQLKILDLGAGSGAIALALADELPRSQ 141 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDC 182 V VD+ K L++AK NA+ N + + +QS W+ +++G FD+IVSNPPYI+ VD Sbjct: 142 VVAVDLYSKTLDVAKKNALANKIV-NVEFMQSSWYENLDGTKFDIIVSNPPYID---VDD 197 Query: 183 LGLE--VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 ++ VR+ +P +L +GL+ R I L + G +E G+ Q D+ IF Sbjct: 198 ANIDDSVREHEPSRALFAADNGLADIRIIISQAGGFLKQGGYLYIEHGFTQANDIANIFS 257 Query: 241 SRKLFLVNAFKDYGGNDR 258 + KD DR Sbjct: 258 QYSFGDIQTIKDLNYKDR 275 >gi|304397560|ref|ZP_07379437.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Pantoea sp. aB] gi|304354732|gb|EFM19102.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Pantoea sp. aB] Length = 276 Score = 132 bits (332), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 97/259 (37%), Positives = 135/259 (52%), Gaps = 10/259 (3%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 RD+ L VTG S +I ++VL D Q L + + R + E + ++G R+F+++ Sbjct: 22 RDAEILLGYVTGKSRSWLIAFDETVLSDEQLAQLNSLLARRARGEPVAHLVGEREFWSLP 81 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L ++ T PRP+TELLV+ ALA LP ILD+GTGTGA+ LAL E P + Sbjct: 82 LRVTDATLIPRPDTELLVEQALAH-LPATPS----TILDMGTGTGAIALALASERPDCQV 136 Query: 125 VGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDC 182 GVD A+E+A SNA +S RF L S WF ++ F +IVSNPPYI++ Sbjct: 137 TGVDRIQAAVELAGSNAQQLSLSNTRF--LLSHWFQALTPQRFSLIVSNPPYIDASDSHL 194 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 +VR F+PR +L GL+ RT+ + L G +E G+ Q V + Sbjct: 195 EQGDVR-FEPRSALVADEAGLADLRTLIEQAPAWLLPGGWLLLEHGWQQGEAVATLMRQN 253 Query: 243 KLFLVNAFKDYGGNDRVLL 261 V DYGGN RV L Sbjct: 254 GYHAVETVNDYGGNPRVTL 272 >gi|332188263|ref|ZP_08389991.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Sphingomonas sp. S17] gi|332011762|gb|EGI53839.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Sphingomonas sp. S17] Length = 269 Score = 132 bits (332), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 87/248 (35%), Positives = 129/248 (52%), Gaps = 10/248 (4%) Query: 17 LSSHQVIVDPDSVLDDRQRFF---LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFE 73 L +H + ++ +++L D R + R E + I G R F+ + L + Sbjct: 27 LFAHALGIERNALLLDLTRTVPDGFWPLVERREAQEPVAYITGTRGFWTLDLMVGPGALV 86 Query: 74 PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133 PR ++E L+ +AL R +LDLGTG G + LALL E KG+GVD S +A Sbjct: 87 PRVDSETLIAAALQ----HFGGRRPATLLDLGTGPGTLLLALLDEWRETKGLGVDRSAEA 142 Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPR 193 L A++NA G+++R + DW +++ G FD IV+NPPYI + + L EV F+P Sbjct: 143 LGYARANAAACGLADRARFVLGDWAAALTGPFDCIVTNPPYIGT--GESLSHEVHGFEPA 200 Query: 194 ISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDY 253 +L G DGL YR +A + R + G C VEIG+ Q V + E++ L V +D Sbjct: 201 SALFAGEDGLDDYRKLAPELRRLVAPGGACVVEIGHEQAPAVTGLLEAQGL-RVALHRDL 259 Query: 254 GGNDRVLL 261 GG R LL Sbjct: 260 GGRPRALL 267 >gi|114327272|ref|YP_744429.1| peptide release factor-glutamine N5-methyltransferase [Granulibacter bethesdensis CGDNIH1] gi|114315446|gb|ABI61506.1| peptide release factor-glutamine N5-methyltransferase [Granulibacter bethesdensis CGDNIH1] Length = 288 Score = 132 bits (332), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 83/241 (34%), Positives = 124/241 (51%), Gaps = 6/241 (2%) Query: 24 VDPDSVLDDRQR----FFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETE 79 +D +L D +R L I R K E + ILG R+F+ + ++ DT PRP+TE Sbjct: 38 LDATGLLRDSEREVTLPLLDEWITRRAKREPLAYILGAREFWGLSFAVTPDTLIPRPDTE 97 Query: 80 LLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKS 139 L++ ALA P + V R+LDLGTGTG + LA L E G+G+D A +A+ Sbjct: 98 TLIEYALALRPP--TQGMVRRVLDLGTGTGCLLLAALHEYRQATGLGIDRMQGAAALARR 155 Query: 140 NAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199 NAV+ G+++R DW FD+++SNPPYI ++ L +VRD++P +L G Sbjct: 156 NAVSLGMADRAAFCAGDWAFCCADRFDLVLSNPPYIPDRDMEGLMADVRDYEPASALAAG 215 Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRV 259 G+ YR I + L G+ +E+G Q+ V + L ++ D GG R Sbjct: 216 EGGMEAYRRIIPSLPDLLTPAGVAILELGIGQEDGVGALAAPAGLRVIGCRVDLGGIARA 275 Query: 260 L 260 L Sbjct: 276 L 276 >gi|223983552|ref|ZP_03633735.1| hypothetical protein HOLDEFILI_01016 [Holdemania filiformis DSM 12042] gi|223964480|gb|EEF68809.1| hypothetical protein HOLDEFILI_01016 [Holdemania filiformis DSM 12042] Length = 284 Score = 132 bits (331), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 81/224 (36%), Positives = 120/224 (53%), Gaps = 12/224 (5%) Query: 44 RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103 R LK E + +LG+ FY R ++ + PRPETE LV + LA + + +D Sbjct: 62 RILKQEPMQYVLGYSWFYGYRFQVNENVLIPRPETEELVANILADLDEYFAEAKTIDAVD 121 Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-- 161 +GTG+GA+ L+L KE P + DIS +A+E+AK+NA + GV +F L D V Sbjct: 122 IGTGSGAIALSLAKEEPKIRMSATDISAEAVEVAKANAASLGVDVKF--LVGDMAQPVID 179 Query: 162 EGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220 G+ D+++ NPPYI + L V+D++P ++L GG DGL YR + + L Sbjct: 180 AGMKVDLLICNPPYIPQ--EETLEASVKDYEPHVALFGGEDGLKFYRQVFAAAPQVLKDK 237 Query: 221 GLCSVEIGYNQKVDVVRIFESRKLF---LVNAFKDYGGNDRVLL 261 + + EIG+NQK ++ E RK F KD G DR+L Sbjct: 238 AMMAFEIGWNQKAALLA--EVRKTFGDVRAEVVKDINGKDRMLF 279 >gi|257462415|ref|ZP_05626829.1| methyltransferase [Fusobacterium sp. D12] gi|317060079|ref|ZP_07924564.1| methyltransferase [Fusobacterium sp. D12] gi|313685755|gb|EFS22590.1| methyltransferase [Fusobacterium sp. D12] Length = 368 Score = 132 bits (331), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 79/212 (37%), Positives = 112/212 (52%), Gaps = 6/212 (2%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110 + ILG +FY PR +TE+LV+ A SL +++ ILD+GTG+GA Sbjct: 155 LQYILGKWEFYGYEFITDERALIPRADTEILVEQAKILSL----EKENPSILDIGTGSGA 210 Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIV 169 + + L KE P + +G+D S KAL +AK N V LQSD F +++G FD+IV Sbjct: 211 IAITLAKEVPEAEVLGIDKSEKALSLAKENKEYQLVR-NVSFLQSDLFEALQGQRFDIIV 269 Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY 229 SNPPYI + L EV+ ++P+ +L DG S Y+ I + HL K G E+GY Sbjct: 270 SNPPYISQEEYEDLMPEVKKYEPKNALTDEGDGYSFYQKIIQQANSHLQKKGYLLFEVGY 329 Query: 230 NQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 Q V E + +DYGG+ RV+L Sbjct: 330 QQAQQVKEWMEEENFEGIYIAEDYGGHQRVVL 361 >gi|257877102|ref|ZP_05656755.1| modification methylase HemK [Enterococcus casseliflavus EC20] gi|257811268|gb|EEV40088.1| modification methylase HemK [Enterococcus casseliflavus EC20] Length = 285 Score = 132 bits (331), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 76/217 (35%), Positives = 120/217 (55%), Gaps = 8/217 (3%) Query: 46 LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLG 105 L+HE +LG+ +FY RL ++ T PRPETE LV++ L ++ +R++D+G Sbjct: 65 LQHEPPQYLLGYEEFYGHRLKVTPATLIPRPETEELVENCLT----KLPADQPLRVVDIG 120 Query: 106 TGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGL 164 TGTGA+ +AL P + VD+S +AL +AK NA G RF Q D V + Sbjct: 121 TGTGAIAIALKLARPQWAVSAVDLSAEALAVAKENAAALGAEIRF--FQGDTLEPVADQQ 178 Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224 +D+IVSNPPYI + + + VR+ +P+++L GL+ Y+ +A L +G + Sbjct: 179 WDLIVSNPPYISAEEWPLMDISVREKEPKMALFAQEQGLAIYKQLAQQAPNCLAPNGQMA 238 Query: 225 VEIGYNQKVDVVRIFESR-KLFLVNAFKDYGGNDRVL 260 +EIG+ Q + V ++F + V KD G DR++ Sbjct: 239 LEIGFQQGLAVQQLFAAAFPNKEVTVVKDLAGQDRMV 275 >gi|77360002|ref|YP_339577.1| N5-glutamine methyltransferase, modifies release factors RF-1 and RF-2 [Pseudoalteromonas haloplanktis TAC125] gi|76874913|emb|CAI86134.1| N5-glutamine methyltransferase, modifies release factors RF-1 and RF-2 [Pseudoalteromonas haloplanktis TAC125] Length = 279 Score = 132 bits (331), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 83/237 (35%), Positives = 123/237 (51%), Gaps = 8/237 (3%) Query: 26 PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85 P+S L Q+ R L E + I+G R+F+++ L +++ T PRP+TE LV+ A Sbjct: 46 PESTLSTEQQQQFDTFCQRRLNGEPVAHIIGQREFWSLSLEVNATTLIPRPDTETLVEQA 105 Query: 86 LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145 L ++P K +LDLGTGTGA+ LAL E P ++ VD A+ +A N Sbjct: 106 LEMAVPSNAK-----VLDLGTGTGAIALALGSEMPTWQITAVDRVADAVALATRNQQRLA 160 Query: 146 VSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204 ++ QS+WFS++ G F +IVSNPPYIE+ + +VR F+P +L DGL+ Sbjct: 161 IN-NVQVKQSNWFSALNGEKFHLIVSNPPYIETTDIHLKQGDVR-FEPLSALVADDDGLA 218 Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 + I +L+ G +E G+ Q V + F + KD G NDRV L Sbjct: 219 DIKQIITQSRDYLHAKGYLLIEHGFEQSGAVSQFFAQMGFINIKTVKDLGNNDRVTL 275 >gi|163803584|ref|ZP_02197451.1| 2-dehydro-3-deoxyphosphooctonate aldolase [Vibrio sp. AND4] gi|159172626|gb|EDP57483.1| 2-dehydro-3-deoxyphosphooctonate aldolase [Vibrio sp. AND4] Length = 285 Score = 132 bits (331), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 90/260 (34%), Positives = 134/260 (51%), Gaps = 9/260 (3%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ LC V G ++ P+ L+ Q+ + + R + E + I+G R+F+++ L Sbjct: 29 DAAVLLCHVLGKPRTYLLTWPEKALEIEQQAQFDDLLARRIAGEPVAYIIGEREFWSLPL 88 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 +S T PRP+TE LV+ AL + + ILDLGTGTGA+ LAL E P + + Sbjct: 89 KVSPSTLIPRPDTERLVEIALDKTYAQTGP-----ILDLGTGTGAIALALASEMPKRQVM 143 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCL 183 GVD+ +A ++A NA + + Q WF + F +IVSNPPYI+ Sbjct: 144 GVDLKQEAKDLAHYNASQLNI-KNVTFAQGCWFEPITSGTKFALIVSNPPYIDEQDPHLS 202 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 +VR F+P+ +L +GL+ R I+D ++L G + E GY+Q V I + Sbjct: 203 QGDVR-FEPKSALVADENGLADIRHISDLARQYLEAGGWLAFEHGYDQGDAVRTIMTNFG 261 Query: 244 LFLVNAFKDYGGNDRVLLFC 263 V KDYGGNDRV L C Sbjct: 262 YEQVVTEKDYGGNDRVTLGC 281 >gi|291535753|emb|CBL08865.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Roseburia intestinalis M50/1] Length = 281 Score = 132 bits (331), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 80/220 (36%), Positives = 120/220 (54%), Gaps = 8/220 (3%) Query: 41 AIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR 100 A+ + +H + I+G +F ++ ++S+ PR +TE LV+ AL P + + Sbjct: 60 ALRKRAEHVPLQYIVGEAEFMGLKFKVNSNVLIPRQDTETLVEEALKVVKPGM------K 113 Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LD+ TG+G + ++++ P +G DIS +AL +AK NA N VS F+ +SD F + Sbjct: 114 VLDMCTGSGCIIVSIVHNIPEVEGTATDISKQALLVAKENAKLNQVSVTFE--RSDLFDN 171 Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220 V G +DVIVSNPPYI + V L EV++F+P +LDG DGL YR I +L Sbjct: 172 VTGTYDVIVSNPPYIRTGEVVKLMPEVQEFEPMEALDGKEDGLYFYRKIIKECKAYLKPG 231 Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 G EIGY+Q V + + V KD NDRV+ Sbjct: 232 GHILFEIGYDQGEAVSGLLKEAGFKNVTVIKDLAHNDRVV 271 >gi|237744128|ref|ZP_04574609.1| methyltransferase [Fusobacterium sp. 7_1] gi|229431357|gb|EEO41569.1| methyltransferase [Fusobacterium sp. 7_1] Length = 370 Score = 131 bits (330), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 75/222 (33%), Positives = 128/222 (57%), Gaps = 7/222 (3%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101 ++R+ K + + ILG +FY + ++ PR +TE+LV+ + + +E+ + I Sbjct: 131 VLRAKKRKPLQYILGEWEFYGLPFKVNEGVLIPRADTEILVEQCIQL-MREVEEPN---I 186 Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 LD+G+G+GA+ +A+ E G+DI+ KA+E+A N N + E + ++S+ F + Sbjct: 187 LDIGSGSGAISIAIANELKSSSVTGIDINEKAIELAIENKTLNKI-ENVNFIESNLFEKL 245 Query: 162 EGLF--DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 + F D+IVSNPPYI L EV++++P+ +L DGL YR I+ +L Sbjct: 246 DKDFKYDLIVSNPPYISKEEYRTLMPEVKNYEPQNALTDLGDGLYFYREISKLAGEYLKD 305 Query: 220 DGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 G + EIGYNQ DV +I ++ +++ KDYGGN+RV++ Sbjct: 306 TGYLAYEIGYNQAKDVTKILQNNNFDVLSVIKDYGGNNRVVI 347 >gi|197284959|ref|YP_002150831.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Proteus mirabilis HI4320] gi|194682446|emb|CAR42348.1| protein methyltransferase (protein-glutamine N-methyltransferase) [Proteus mirabilis HI4320] Length = 282 Score = 131 bits (330), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 91/258 (35%), Positives = 137/258 (53%), Gaps = 12/258 (4%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 RD+ L VT + +I ++VL + ++ L++ + R +K E I ++G R+F+++ Sbjct: 22 RDAEILLGHVTKRARTYLIAFSETVLLEDEQVQLSSLLARRIKGEPIAYLVGEREFWSLP 81 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEK--RDVVRILDLGTGTGAVCLALLKESPFF 122 L +S T PRP+TE LV+ AL EK RILDLGTGTGA+ LA+ E Sbjct: 82 LKVSPATLIPRPDTECLVEKAL-------EKLSAQASRILDLGTGTGAIALAIASERSDC 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181 + +GVD +A+ +A NA +S + +S WFSS+ G FD+I+SNPPYI+ Sbjct: 135 RVLGVDFQPEAVALAIENAQHLALS-NVEFTESCWFSSLSGYQFDMIISNPPYIDEEDEH 193 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P +L G + I + L +G +E G+ Q V IF Sbjct: 194 LYQGDVR-FEPLTALVAADHGFADIELIITNARQFLANNGWVLIEHGWQQGERVRNIFID 252 Query: 242 RKLFLVNAFKDYGGNDRV 259 + V F+DYGGN+RV Sbjct: 253 KGYCCVETFRDYGGNERV 270 >gi|157829147|ref|YP_001495389.1| bifunctional N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase/tRNA (m7G46) methyltransferase [Rickettsia rickettsii str. 'Sheila Smith'] gi|165933876|ref|YP_001650665.1| bifunctional N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase/tRNA (m7G46) methyltransferase [Rickettsia rickettsii str. Iowa] gi|157801628|gb|ABV76881.1| bifunctional N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase/tRNA (m7G46) methyltransferase [Rickettsia rickettsii str. 'Sheila Smith'] gi|165908963|gb|ABY73259.1| peptide release factor-glutamine N5-methyltransferase [Rickettsia rickettsii str. Iowa] Length = 524 Score = 131 bits (330), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 83/262 (31%), Positives = 132/262 (50%), Gaps = 21/262 (8%) Query: 22 VIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELL 81 ++++ D L++ + + R LKHE I I G ++FY+ ++ PR +TE+L Sbjct: 43 LLINLDEQLNEAKIEAFEKLLARRLKHEPIVYITGVKEFYSREFIVNKHVLIPRSDTEVL 102 Query: 82 VDSALAFSL-----PRIEKRD---------------VVRILDLGTGTGAVCLALLKESPF 121 VD P ++ D + IL+LGTG+G + ++LL E P Sbjct: 103 VDVVFQCHSRESGNPEKKQPDPCFRGNDISKNCNDKFLNILELGTGSGCIAISLLCELPN 162 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIV 180 V DIS A++I KSNA V++R + S+WF ++E FD IVSNPPYI Sbjct: 163 ANVVATDISLDAIDIIKSNAAKYEVTDRIQIIHSNWFENIETQKFDFIVSNPPYIAHSEK 222 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 + +E +++P I+L DGL Y IA+ + L +G +EIG+ Q+ V +IF Sbjct: 223 SEMAIETINYEPSIALFAEKDGLQAYFLIAENAKQFLKPNGKIILEIGFKQEEAVTQIFL 282 Query: 241 SRKLFLVNAFKDYGGNDRVLLF 262 + + +KD G+ RV+L Sbjct: 283 DHGYNIESVYKDLQGHSRVILL 304 >gi|254787711|ref|YP_003075140.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Teredinibacter turnerae T7901] gi|237685052|gb|ACR12316.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Teredinibacter turnerae T7901] Length = 277 Score = 131 bits (330), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 88/257 (34%), Positives = 129/257 (50%), Gaps = 9/257 (3%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L V G S + P+ L + ++ R E + ILG R+F+++ Sbjct: 24 DTELLLAAVLGKSRTWLFTWPEYNLSEEEQARFAEFFARRRAGEPVAYILGEREFWSLPF 83 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 + + T PRP+TELLV + +P+ R+LDLGTGTGA+ LAL E V Sbjct: 84 FVDASTLIPRPDTELLVSCIVDLPIPK------QRVLDLGTGTGAIALALASELSDAVIV 137 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLG 184 VD S +A+++A N G + + LQSDW+S++ + FDVIV+NPPYI+ Sbjct: 138 AVDKSPEAVKLALRNQARLGFT-NVEILQSDWYSALGDQHFDVIVANPPYIDEKDTHLGR 196 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 +VR F+PR +L GL+ R I HLN G +E G+ Q V I + Sbjct: 197 GDVR-FEPRSALVAADKGLADIRHIIVHAVEHLNDGGTLLIEHGWQQDERVAEILAGKGF 255 Query: 245 FLVNAFKDYGGNDRVLL 261 + F+D GGN+R L Sbjct: 256 LEIRTFQDLGGNNRATL 272 >gi|312897942|ref|ZP_07757355.1| protein-(glutamine-N5) methyltransferase [Megasphaera micronuciformis F0359] gi|310620976|gb|EFQ04523.1| protein-(glutamine-N5) methyltransferase [Megasphaera micronuciformis F0359] Length = 284 Score = 131 bits (330), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 83/220 (37%), Positives = 120/220 (54%), Gaps = 8/220 (3%) Query: 44 RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103 R+ ++ H ILG + F + ++ PRPETELLV++ L K VR+LD Sbjct: 68 RAARYPVAH-ILGIKPFMGLDFIVNEHVLVPRPETELLVEAVLEIC----PKEVPVRVLD 122 Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG 163 +GTG+GA+ L+LL P G GVDIS AL+IA N+ + +R + SD F++VE Sbjct: 123 MGTGSGAILLSLLSYLPQATGTGVDISSDALKIAAENSEALHI-DRAQWVNSDLFTNVEA 181 Query: 164 L-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL 222 +D +VSNPPY+ + + L EV+ +DP+ +L GG DGL YR +A +L G Sbjct: 182 HEYDWLVSNPPYLTAPDMQNLEKEVK-YDPKTALYGGTDGLDIYRRLASEGGAYLKVGGH 240 Query: 223 CSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262 C VE+G Q V +F + LV DY +R +L Sbjct: 241 CIVEVGAGQARQVAELFTEQDFELVRIINDYADTERHVLL 280 >gi|261340149|ref|ZP_05968007.1| protein-(glutamine-N5) methyltransferase [Enterobacter cancerogenus ATCC 35316] gi|288317664|gb|EFC56602.1| protein-(glutamine-N5) methyltransferase [Enterobacter cancerogenus ATCC 35316] Length = 276 Score = 131 bits (330), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 91/258 (35%), Positives = 134/258 (51%), Gaps = 8/258 (3%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 RD+ L VTG + ++ ++ L Q L+ + R E + ++G R+F+++ Sbjct: 22 RDAEILLEHVTGKTRTWLLAFGETALTAEQEAALSALLARRKTGEPVAHLVGEREFWSLP 81 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L +S+ T PRP+TE LV+ ALA R+ ++ ILDLGTGTGA+ LAL E P Sbjct: 82 LYVSAATLIPRPDTECLVEQALA----RLPEQSTA-ILDLGTGTGAIALALASERPDCSV 136 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCL 183 VD+ A+ +A+ N G+ LQS WFS++E F +IVSNPPYI+ Sbjct: 137 TAVDLMPDAVALAQRNVQRLGLC-NVTVLQSRWFSALEARSFGMIVSNPPYIDENDPHLA 195 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 +VR F+PR +L +GL+ I +HL G VE G+ Q V +F Sbjct: 196 QGDVR-FEPRTALVASGEGLADLDHIVTTSRQHLLHGGWLLVEHGWTQGEAVRDLFTRAG 254 Query: 244 LFLVNAFKDYGGNDRVLL 261 V +DYGGN+R+ L Sbjct: 255 YTGVETCRDYGGNERLTL 272 >gi|290969300|ref|ZP_06560825.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Megasphaera genomosp. type_1 str. 28L] gi|290780806|gb|EFD93409.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Megasphaera genomosp. type_1 str. 28L] Length = 290 Score = 131 bits (330), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 85/217 (39%), Positives = 124/217 (57%), Gaps = 7/217 (3%) Query: 50 SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109 ++ I G + F+ +S + PRPETELLV+ + + ++R+ +RILD+GTG+G Sbjct: 73 AVAHITGVKAFFGSDFLVSPEVLIPRPETELLVE----YVIHACKQRESLRILDIGTGSG 128 Query: 110 AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVI 168 A+ L+LL P G GVDIS AL+IA+ N++ G+ R +SD V+G F VI Sbjct: 129 AILLSLLAHLPQAVGWGVDISRAALQIAEKNSIVQGLETRAVWRESDLCQQVQGERFSVI 188 Query: 169 VSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228 VSNPPY+ + + L E+R +P +L GG DGL YR +A L GLC+VEIG Sbjct: 189 VSNPPYLTAADMAQLQPEIRR-EPETALFGGQDGLDIYRRLAVETVPLLEPGGLCAVEIG 247 Query: 229 YNQKVDVVRIFESRKLF-LVNAFKDYGGNDRVLLFCR 264 Q+ V R+F + + L + DYG R L+F + Sbjct: 248 RGQEEAVQRLFTADGDYTLQDCVWDYGRILRHLVFKK 284 >gi|237731779|ref|ZP_04562260.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Citrobacter sp. 30_2] gi|226907318|gb|EEH93236.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Citrobacter sp. 30_2] Length = 277 Score = 131 bits (330), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 95/258 (36%), Positives = 132/258 (51%), Gaps = 8/258 (3%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 RD+ L VTG ++ ++ L + QR L + R + E + + G R+F+++ Sbjct: 22 RDAEILLEFVTGKGRTFILAFGETELTEAQRQQLDTLLERRQRGEPVAHLTGVREFWSLP 81 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L +S T PRP+TE LV+ ALA LP RILDLGTGTGA+ LAL E P Sbjct: 82 LFVSPATLIPRPDTECLVEQALA-RLP----ASACRILDLGTGTGAIALALATERPDCAV 136 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183 VD A+ +A N G++ LQS+WFS+++G FD+IVSNPPYI+ Sbjct: 137 TAVDRMPDAVALAIRNKQQLGINN-VCVLQSNWFSALQGQQFDMIVSNPPYIDEQDPHLA 195 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 +VR F+P +L G GL+ I D R L G +E G+ Q V F Sbjct: 196 QGDVR-FEPLSALVAGDQGLADIVHIIDQSLRMLTPGGYLLLEHGWQQGEAVRDAFTRAG 254 Query: 244 LFLVNAFKDYGGNDRVLL 261 V +DYGGN+R+ L Sbjct: 255 YLAVETCRDYGGNERITL 272 >gi|118602770|ref|YP_903985.1| HemK family modification methylase [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] gi|118567709|gb|ABL02514.1| [protein release factor]-glutamine N5-methyltransferase [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] Length = 261 Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 75/207 (36%), Positives = 113/207 (54%), Gaps = 14/207 (6%) Query: 56 GWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL 115 G + FY++ ++ T PRPETELL+D AL +K ++LDLGTG+G + + L Sbjct: 64 GTKGFYHLDFKVTPSTLIPRPETELLIDIALGL----FDKNQTCKVLDLGTGSGIIIITL 119 Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPY 174 ++P + D S AL+IA+ NA TN + WF + +FD+I+SNPPY Sbjct: 120 GDKNPQWHLTATDSSINALDIAQQNAKTN-----INFQLGSWFKATPNQIFDLIISNPPY 174 Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234 I+ L F+P+ +L G DGL RTI + +HLNK G +E G++Q+ + Sbjct: 175 IKQSDPHLNDLS---FEPQSALVSGKDGLDDIRTIINNAPQHLNKKGYILLEHGFDQQQE 231 Query: 235 VVRIFESRKLFLVNAFKDYGGNDRVLL 261 ++++ S F + FKDY DR LL Sbjct: 232 IIQLL-SNNFFNIQKFKDYNQQDRALL 257 >gi|52425246|ref|YP_088383.1| HemK protein [Mannheimia succiniciproducens MBEL55E] gi|52307298|gb|AAU37798.1| HemK protein [Mannheimia succiniciproducens MBEL55E] Length = 340 Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 99/273 (36%), Positives = 146/273 (53%), Gaps = 17/273 (6%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D++ L VT S +I D++L + + L+ +VR + E I ILG +DF+++ L Sbjct: 66 DANRLLQFVTQKSKGTIIAFSDTLLTENESALLSQYLVRRCEGEPIAYILGEQDFWSLNL 125 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDV---VRILDLGTGTGAVCLALL------ 116 +S DT PRP+TE+LV+ AL F+ R+ + ILDLGTGTGA+ LAL Sbjct: 126 EVSPDTLIPRPDTEILVEKALEFAKFRLNSPHFSGELAILDLGTGTGAIALALAAELAPI 185 Query: 117 --KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPP 173 K + +GVD++ A+E+AK NA+ N + + + LQS+WF +E FD+IV NPP Sbjct: 186 SQKCGAKLRILGVDLTNGAVELAKRNALRNQLPQ-VEFLQSNWFEQLENRQFDIIVGNPP 244 Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233 YI+ +VR F+P +L G + R I + HL G +E G+ Q Sbjct: 245 YIDRQDEHLALGDVR-FEPLTALVAEDSGYADLRHIIERAPFHLKHQGWLILEHGWQQGQ 303 Query: 234 DVVRIFE--SRKLF-LVNAFKDYGGNDRVLLFC 263 V IF S+ + V KDYG N+R+ L C Sbjct: 304 KVRSIFNEFSQNYWQQVATMKDYGDNERITLGC 336 >gi|283785499|ref|YP_003365364.1| protein methyltransferase hemk (protein-glutamine N methyltransferase) [Citrobacter rodentium ICC168] gi|282948953|emb|CBG88556.1| protein methyltransferase hemk (protein-glutamine N methyltransferase) [Citrobacter rodentium ICC168] Length = 278 Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 94/258 (36%), Positives = 131/258 (50%), Gaps = 8/258 (3%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 RD+ L VTG + ++ ++ L D Q+ L + R + E I + G R+F+++ Sbjct: 22 RDAEILLEFVTGKTRTWILAFGETALTDTQQQQLATLLARRRRGEPIAHLTGVREFWSLP 81 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L +S T PRP+TE LV+ ALA LP RILDLGTGTGA+ LAL E P Sbjct: 82 LFVSPATLIPRPDTECLVEQALA-RLP----ASPCRILDLGTGTGAIALALATERPDCVI 136 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183 VD A+ +A+ NA + LQSDWFS+V+G FD+IVSNPPYI+ Sbjct: 137 TAVDRMPDAVALAQRNAAHLAIGN-VRILQSDWFSAVKGEQFDMIVSNPPYIDEQDPHLA 195 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 +VR F+P +L G G++ I L+ G +E G+ Q V F Sbjct: 196 EGDVR-FEPLSALVAGDHGMADIVQIIAQARDFLSAGGFLLLEHGWQQGAAVREAFSRAG 254 Query: 244 LFLVNAFKDYGGNDRVLL 261 V +DYG N+R+ L Sbjct: 255 YQAVATCRDYGDNERITL 272 >gi|119775697|ref|YP_928437.1| hemK family protein [Shewanella amazonensis SB2B] gi|119768197|gb|ABM00768.1| hemK family protein [Shewanella amazonensis SB2B] Length = 285 Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 85/237 (35%), Positives = 125/237 (52%), Gaps = 8/237 (3%) Query: 26 PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85 P+ L Q I R K + ILG R+F++++ ++ T PRP+TE+LV++A Sbjct: 48 PERPLTSEQWKHFEQLINRRAKGVPVAHILGEREFWSLKFLVNETTLIPRPDTEMLVETA 107 Query: 86 LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145 L LP D R+LD+GTGTGA+ LAL E P ++ +D A+ +AK+N G Sbjct: 108 LNLPLP-----DNARVLDMGTGTGAIALALASERPNWRITALDKVDDAVALAKANREQLG 162 Query: 146 VSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204 +S+ + LQSDWFS+V + FD+IVSNPPYI+ +VR F+P +L +G + Sbjct: 163 LSQ-VEILQSDWFSAVRDADFDLIVSNPPYIDEHDEHLAMGDVR-FEPLSALTAADEGYA 220 Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 IA HL G +E G+ Q + + S V +D+G NDR L Sbjct: 221 DLNHIAMHAREHLKVGGYLLLEHGFAQALKLRETLVSLGYDKVATVRDFGSNDRCTL 277 >gi|331090677|ref|ZP_08339526.1| protein-(glutamine-N5) methyltransferase [Lachnospiraceae bacterium 2_1_46FAA] gi|330400091|gb|EGG79742.1| protein-(glutamine-N5) methyltransferase [Lachnospiraceae bacterium 2_1_46FAA] Length = 274 Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 85/255 (33%), Positives = 134/255 (52%), Gaps = 8/255 (3%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L +T +S +P + Q+ + K + + ++F + Sbjct: 25 DAWILLEYITKISRAMYYANPKREMTGEQKTQYKYFVEERAKRIPLQHLTKEQEFMGLSF 84 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 ++ PR +TE+LV++ L + + +R+LD+ TG+G + ++LLK KGV Sbjct: 85 EVNEHVLIPRQDTEVLVETVLE------DLEENMRVLDICTGSGCILISLLKIMRGVKGV 138 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185 GVDIS +ALE+A+ NA + + F +QSD F +VEG +DVIVSNPPYI++ ++ L Sbjct: 139 GVDISEEALEVARRNAQKHDMEAVF--IQSDLFENVEGTYDVIVSNPPYIKTEEIEKLEE 196 Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245 EV+ DP ++LDG DGL YR I ++L ++G EIG Q +V + E Sbjct: 197 EVKLHDPMLALDGKEDGLYFYRKIIKESRKYLKRNGKLYFEIGNTQGEEVKTLMEEEGFT 256 Query: 246 LVNAFKDYGGNDRVL 260 V KD G DRV+ Sbjct: 257 NVKIKKDLAGLDRVV 271 >gi|89070965|ref|ZP_01158191.1| modification methylase, HemK family protein [Oceanicola granulosus HTCC2516] gi|89043472|gb|EAR49686.1| modification methylase, HemK family protein [Oceanicola granulosus HTCC2516] Length = 289 Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 86/255 (33%), Positives = 119/255 (46%), Gaps = 21/255 (8%) Query: 22 VIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELL 81 ++ P+ V D + I R HE + + G R FY ++ D +PRPETE L Sbjct: 43 TLILPEPVPADALAIY-RQLITRRAAHEPVSHLTGRRMFYGREFLVTPDVLDPRPETETL 101 Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE-----SPFFKGVGVDISCKALEI 136 +++ALA ++LDLG G+G + L LL E P G GV++S A E+ Sbjct: 102 IEAALA--------EPFAQVLDLGMGSGCILLTLLAEMEAMGHPEVWGAGVELSPAAFEV 153 Query: 137 AKSNAVTNGVSERFDTLQSDWFSSVEGLFD-------VIVSNPPYIESVIVDCLGLEVRD 189 A N + ER LQ W++ + F +IVSNPPY+ L VR+ Sbjct: 154 AWWNRNAFRLEERALLLQGSWYAPLAAEFGADMPGFALIVSNPPYVTEDEWQALDATVRE 213 Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249 +PRI+L G DGL+ YR I HL G VEIG Q + V + L V Sbjct: 214 HEPRIALTDGADGLTAYREIVASAPAHLAPRGRLMVEIGPAQGMAVAALMLEAGLSDVRI 273 Query: 250 FKDYGGNDRVLLFCR 264 +D G DRV+L R Sbjct: 274 VQDLDGRDRVVLGRR 288 >gi|257867024|ref|ZP_05646677.1| modification methylase HemK [Enterococcus casseliflavus EC30] gi|257873359|ref|ZP_05653012.1| modification methylase HemK [Enterococcus casseliflavus EC10] gi|257801080|gb|EEV30010.1| modification methylase HemK [Enterococcus casseliflavus EC30] gi|257807523|gb|EEV36345.1| modification methylase HemK [Enterococcus casseliflavus EC10] Length = 285 Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 76/217 (35%), Positives = 120/217 (55%), Gaps = 8/217 (3%) Query: 46 LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLG 105 L+HE +LG+ +FY RL ++ T PRPETE LV++ L ++ +R++D+G Sbjct: 65 LQHEPPQYLLGYEEFYGHRLKVTPATLIPRPETEELVENCLT----KLPADQPLRVVDIG 120 Query: 106 TGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGL 164 TGTGA+ +AL P + VD+S +AL +AK NA G RF Q D V + Sbjct: 121 TGTGAIAIALKLARPQWAVSAVDLSAEALAVAKENAAALGAEIRF--FQGDTLEPVADQQ 178 Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224 +D+IVSNPPYI + + + VR+ +P+++L GL+ Y+ +A L +G + Sbjct: 179 WDLIVSNPPYISAEEWPLMDISVREKEPKMALFAQEQGLAIYKQLAQQAPNCLAPNGQMA 238 Query: 225 VEIGYNQKVDVVRIFESR-KLFLVNAFKDYGGNDRVL 260 +EIG+ Q + V ++F + V KD G DR++ Sbjct: 239 LEIGFQQGLVVQQLFAAAFPNKEVTVVKDLAGQDRMV 275 >gi|330813116|ref|YP_004357355.1| methylase of polypeptide chain release factors [Candidatus Pelagibacter sp. IMCC9063] gi|327486211|gb|AEA80616.1| methylase of polypeptide chain release factors [Candidatus Pelagibacter sp. IMCC9063] Length = 284 Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 79/258 (30%), Positives = 134/258 (51%), Gaps = 6/258 (2%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 DS L V + + +L+ Q ++ I R E + IL +DF+N Sbjct: 26 DSEIILASVLKTDRINLSTQHNLILNKSQELLMSQLIERRKNKEPVAYILNKKDFWNETY 85 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIE-KRDVVRILDLGTGTGAVCLALLKESPFFKG 124 + PRPETE+L++ L +I+ K V+++LD+G G+G + ++ L+E G Sbjct: 86 FVDQRALIPRPETEILIE----MVLKKIKDKSKVLQLLDIGCGSGCLLISCLRELKKSIG 141 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCL 183 +G+DIS AL ++K N +++R + + F + FDVI+SNPPY+ S D L Sbjct: 142 IGLDISSDALAVSKINVKNYKLNKRVELHKESIFHFLTLKKFDVILSNPPYLSSAEYDNL 201 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 ++V++F+P+ +L GG DG SHY+ I S L K+GL ++E+G Q + I Sbjct: 202 EIDVKNFEPKTALKGGHDGTSHYKKIITFASMSLKKNGLLALELGDQQFFKIKEILAENS 261 Query: 244 LFLVNAFKDYGGNDRVLL 261 +++ ++ G R +L Sbjct: 262 FRVLDKYRLINGEIRCIL 279 >gi|91776826|ref|YP_546582.1| HemK family modification methylase [Methylobacillus flagellatus KT] gi|91710813|gb|ABE50741.1| [protein release factor]-glutamine N5-methyltransferase [Methylobacillus flagellatus KT] Length = 284 Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 86/241 (35%), Positives = 123/241 (51%), Gaps = 7/241 (2%) Query: 22 VIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELL 81 +I D + D R + + R ++ E + ILG R+FY ++ DT PR +TE L Sbjct: 46 LIAHGDEAVTDALRARFESLLARRIEGEPVAHILGRREFYGRDFIVTPDTLIPRSDTETL 105 Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 V++A L RI ILD+GTGTGA+ + L E P K VD S AL IA+ NA Sbjct: 106 VEAA----LDRIPVGQTCEILDMGTGTGAIGITLALERPQAKVTIVDYSEAALAIARENA 161 Query: 142 VTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200 + L+SDWFS++ G FD+IVSNPPYIE+ ++R F+P +L G Sbjct: 162 -RQLSAHNVTALRSDWFSALGGRCFDLIVSNPPYIEAADPHLQQGDLR-FEPIAALASGA 219 Query: 201 DGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 DGL R ++ + HL +G +E GY Q V + + + D G++RV Sbjct: 220 DGLDDIRILSAQAADHLITNGWLMLEHGYQQGAAVRSLLQQHGFANIGTATDLAGHERVT 279 Query: 261 L 261 L Sbjct: 280 L 280 >gi|315649891|ref|ZP_07902973.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Paenibacillus vortex V453] gi|315274690|gb|EFU38072.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Paenibacillus vortex V453] Length = 296 Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 89/270 (32%), Positives = 134/270 (49%), Gaps = 10/270 (3%) Query: 1 MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60 M+ R++ L V GLS + R L AI R + I+G ++F Sbjct: 31 MEPQRNAQLLLEHVLGLSGSSYYMALPEPFPAECRHALEEAIRRKAEGVPAQYIIGEQEF 90 Query: 61 YNVRLTLSSDTFEPRPETELLVDSALAFS---LPRIEKRDVVRILDLGTGTGAVCLALLK 117 Y ++ PRPETELLV++ L + PR E R ++ +D+GTG+GA+ + L Sbjct: 91 YGRPFEVTPAVLIPRPETELLVEAVLKYGQELAPRSEAR--LKAIDIGTGSGAIAVTLAL 148 Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF-DVIVSNPPYIE 176 ++P ++ + DIS +ALE+A NA + F Q + GL D++VSNPPYI Sbjct: 149 QAPSWELLASDISPEALEVATRNAKQLHANVEFR--QGNLLEPFAGLAPDILVSNPPYIP 206 Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236 + ++ L EVRD++PR +LDGG DGL+ YR + + L + E+G Q DV Sbjct: 207 AEDIEGLQPEVRDYEPRTALDGGRDGLNPYRIMMAQLPLLSAPPRLIAFELGMGQAGDVA 266 Query: 237 RIFESRKLFL-VNAFKDYGGNDR-VLLFCR 264 + + + D G DR VL CR Sbjct: 267 ELLRQAGHWQEIVTVPDLAGIDRHVLGICR 296 >gi|293395775|ref|ZP_06640057.1| protein methyltransferase HemK [Serratia odorifera DSM 4582] gi|291421712|gb|EFE94959.1| protein methyltransferase HemK [Serratia odorifera DSM 4582] Length = 276 Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 93/263 (35%), Positives = 139/263 (52%), Gaps = 14/263 (5%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A RD+ L VTG + ++ +++L ++ L ++R + E + ++G R+F++ Sbjct: 20 AKRDAEILLGFVTGRARTFLLAFGETLLTTQESAQLEQLLMRRERGEPVAYLIGEREFWS 79 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLP--RIEKRDVVRILDLGTGTGAVCLALLKESP 120 + L++S T PRP+TE LV+ ALA LP R E ILDLGTGTGA+ LAL E Sbjct: 80 LPLSVSPATLIPRPDTECLVEQALA-RLPAHRCE------ILDLGTGTGAIALALASERA 132 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEG-LFDVIVSNPPYIESV 178 GVD+ +A+ +A+ NA + +F Q DWF+ V G FD+I SNPPYI+ Sbjct: 133 DCMVTGVDLQPQAVALAQHNAQKLAIGNVQFH--QGDWFTPVAGRRFDLIASNPPYIDGD 190 Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238 V +VR F+P +L GL+ R I R+L G +E G+ Q V + Sbjct: 191 DVHLSQGDVR-FEPGSALVAQEHGLADLRAIVQQAPRYLQPQGWLLLEHGWQQAESVRAM 249 Query: 239 FESRKLFLVNAFKDYGGNDRVLL 261 + + + +DYGGN RV L Sbjct: 250 LAAAGFSAIESCRDYGGNLRVTL 272 >gi|212711978|ref|ZP_03320106.1| hypothetical protein PROVALCAL_03054 [Providencia alcalifaciens DSM 30120] gi|212685500|gb|EEB45028.1| hypothetical protein PROVALCAL_03054 [Providencia alcalifaciens DSM 30120] Length = 277 Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 94/260 (36%), Positives = 135/260 (51%), Gaps = 8/260 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A RD+ L TG S ++ ++ L ++ L ++R + E I I+G R+F++ Sbjct: 20 AKRDAQILLQYTTGRSRTYILAFDETELTSDEQTQLDALLMRREQGEPIAYIVGEREFWS 79 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +S T PRP+TE LV+ AL LP E RILDLGTGTGA+ LAL E P Sbjct: 80 LPLYVSPATLIPRPDTECLVEQALV-RLPNAE----CRILDLGTGTGAIGLALASELPNS 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181 VGVD + +A+ +A+ N + QSDWF+S+ LFD+IVSNPPYI+ + Sbjct: 135 CVVGVDFNPEAVALAQRNQQRLALP-NIQFSQSDWFASLPNELFDMIVSNPPYIDEGDIH 193 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P +L G S I ++L + G +E G+ Q V ++F Sbjct: 194 LSQGDVR-FEPSTALIADNHGFSDLEHIIATSKQYLKQQGWLLLEHGWQQGSTVRKLFNE 252 Query: 242 RKLFLVNAFKDYGGNDRVLL 261 V DYGG +RV L Sbjct: 253 NGYTNVETCLDYGGKERVSL 272 >gi|167471071|ref|ZP_02335775.1| methyltransferase, HemK family protein [Yersinia pestis FV-1] Length = 267 Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 88/257 (34%), Positives = 133/257 (51%), Gaps = 7/257 (2%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 RD+ L VTG + ++ ++ + Q +L R + E I ++G R+F+++ Sbjct: 13 RDAEILLSFVTGKARTYLLAFGETEITAEQLLWLETLANRREQGEPIAYLVGEREFWSLP 72 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L++SS T PRP+TE LV+ ALA LP + RILDLGTGTGA+ LAL E Sbjct: 73 LSVSSATLIPRPDTECLVEQALA-RLPAMP----CRILDLGTGTGAIALALATERRDCAV 127 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184 + VDI+ A+ +A+ NA + + LQ WF V G F +I SNPPYI++ Sbjct: 128 IAVDINADAVALARHNAEKLTI-DNVCFLQGSWFEPVSGRFALIASNPPYIDANDPHLNE 186 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 +VR ++P +L +G++ I +L+ G +E G+ Q V + ++ Sbjct: 187 GDVR-YEPHSALVAAAEGMADLAAIVSQAPGYLDPGGWLMLEHGWQQANAVQELLKNSGF 245 Query: 245 FLVNAFKDYGGNDRVLL 261 V KDYG NDRV L Sbjct: 246 SAVMTCKDYGNNDRVTL 262 >gi|22126174|ref|NP_669597.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Yersinia pestis KIM 10] gi|45441670|ref|NP_993209.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Yersinia pestis biovar Microtus str. 91001] gi|108807398|ref|YP_651314.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Yersinia pestis Antiqua] gi|108811663|ref|YP_647430.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Yersinia pestis Nepal516] gi|145598395|ref|YP_001162471.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Yersinia pestis Pestoides F] gi|149366050|ref|ZP_01888085.1| release factors RF-1 and RF-2 N5-glutamine methyltransferase [Yersinia pestis CA88-4125] gi|162418925|ref|YP_001606877.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Yersinia pestis Angola] gi|165926407|ref|ZP_02222239.1| methyltransferase, HemK family [Yersinia pestis biovar Orientalis str. F1991016] gi|165938832|ref|ZP_02227386.1| methyltransferase, HemK family [Yersinia pestis biovar Orientalis str. IP275] gi|166009186|ref|ZP_02230084.1| methyltransferase, HemK family [Yersinia pestis biovar Antiqua str. E1979001] gi|166211074|ref|ZP_02237109.1| methyltransferase, HemK family [Yersinia pestis biovar Antiqua str. B42003004] gi|167401386|ref|ZP_02306883.1| methyltransferase, HemK family [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167419945|ref|ZP_02311698.1| methyltransferase, HemK family [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167424706|ref|ZP_02316459.1| methyltransferase, HemK family [Yersinia pestis biovar Mediaevalis str. K1973002] gi|218929129|ref|YP_002347004.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Yersinia pestis CO92] gi|229894729|ref|ZP_04509909.1| release factors RF-1 and RF-2 N5-glutamine methyltransferase [Yersinia pestis Pestoides A] gi|229897429|ref|ZP_04512585.1| release factors RF-1 and RF-2 N5-glutamine methyltransferase [Yersinia pestis biovar Orientalis str. PEXU2] gi|229898072|ref|ZP_04513223.1| release factors RF-1 and RF-2 N5-glutamine methyltransferase [Yersinia pestis biovar Orientalis str. India 195] gi|229901941|ref|ZP_04517062.1| release factors RF-1 and RF-2 N5-glutamine methyltransferase [Yersinia pestis Nepal516] gi|270490876|ref|ZP_06207950.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Yersinia pestis KIM D27] gi|294503911|ref|YP_003567973.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Yersinia pestis Z176003] gi|21959138|gb|AAM85848.1|AE013831_11 possible protoporphyrinogen oxidase [Yersinia pestis KIM 10] gi|45436532|gb|AAS62086.1| putative protoporphyrinogen oxidase [Yersinia pestis biovar Microtus str. 91001] gi|108775311|gb|ABG17830.1| protoporphyrinogen oxidase [Yersinia pestis Nepal516] gi|108779311|gb|ABG13369.1| putative protoporphyrinogen oxidase [Yersinia pestis Antiqua] gi|115347740|emb|CAL20655.1| putative protoporphyrinogen oxidase [Yersinia pestis CO92] gi|145210091|gb|ABP39498.1| protoporphyrinogen oxidase [Yersinia pestis Pestoides F] gi|149292463|gb|EDM42537.1| release factors RF-1 and RF-2 N5-glutamine methyltransferase [Yersinia pestis CA88-4125] gi|162351740|gb|ABX85688.1| methyltransferase, HemK family [Yersinia pestis Angola] gi|165913195|gb|EDR31818.1| methyltransferase, HemK family [Yersinia pestis biovar Orientalis str. IP275] gi|165921628|gb|EDR38825.1| methyltransferase, HemK family [Yersinia pestis biovar Orientalis str. F1991016] gi|165991741|gb|EDR44042.1| methyltransferase, HemK family [Yersinia pestis biovar Antiqua str. E1979001] gi|166208254|gb|EDR52734.1| methyltransferase, HemK family [Yersinia pestis biovar Antiqua str. B42003004] gi|166961640|gb|EDR57661.1| methyltransferase, HemK family [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167049082|gb|EDR60490.1| methyltransferase, HemK family [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167056588|gb|EDR66357.1| methyltransferase, HemK family [Yersinia pestis biovar Mediaevalis str. K1973002] gi|229680837|gb|EEO76932.1| release factors RF-1 and RF-2 N5-glutamine methyltransferase [Yersinia pestis Nepal516] gi|229689113|gb|EEO81178.1| release factors RF-1 and RF-2 N5-glutamine methyltransferase [Yersinia pestis biovar Orientalis str. India 195] gi|229693766|gb|EEO83815.1| release factors RF-1 and RF-2 N5-glutamine methyltransferase [Yersinia pestis biovar Orientalis str. PEXU2] gi|229702202|gb|EEO90221.1| release factors RF-1 and RF-2 N5-glutamine methyltransferase [Yersinia pestis Pestoides A] gi|262361968|gb|ACY58689.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Yersinia pestis D106004] gi|262365893|gb|ACY62450.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Yersinia pestis D182038] gi|270339380|gb|EFA50157.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Yersinia pestis KIM D27] gi|294354370|gb|ADE64711.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Yersinia pestis Z176003] gi|320015304|gb|ADV98875.1| release factors RF-1 and RF-2 N5-glutamine methyltransferase [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 276 Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 88/257 (34%), Positives = 133/257 (51%), Gaps = 7/257 (2%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 RD+ L VTG + ++ ++ + Q +L R + E I ++G R+F+++ Sbjct: 22 RDAEILLSFVTGKARTYLLAFGETEITAEQLLWLETLANRREQGEPIAYLVGEREFWSLP 81 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L++SS T PRP+TE LV+ ALA LP + RILDLGTGTGA+ LAL E Sbjct: 82 LSVSSATLIPRPDTECLVEQALA-RLPAMP----CRILDLGTGTGAIALALATERRDCAV 136 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184 + VDI+ A+ +A+ NA + + LQ WF V G F +I SNPPYI++ Sbjct: 137 IAVDINADAVALARHNAEKLTI-DNVCFLQGSWFEPVSGRFALIASNPPYIDANDPHLNE 195 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 +VR ++P +L +G++ I +L+ G +E G+ Q V + ++ Sbjct: 196 GDVR-YEPHSALVAAAEGMADLAAIVSQAPGYLDPGGWLMLEHGWQQANAVQELLKNSGF 254 Query: 245 FLVNAFKDYGGNDRVLL 261 V KDYG NDRV L Sbjct: 255 SAVMTCKDYGNNDRVTL 271 >gi|33152003|ref|NP_873356.1| protein-glutamine N-methyl transferase [Haemophilus ducreyi 35000HP] gi|33148225|gb|AAP95745.1| Protein-glutamine N-methyl transferase [Haemophilus ducreyi 35000HP] Length = 290 Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 91/257 (35%), Positives = 139/257 (54%), Gaps = 6/257 (2%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D++ L VT S + ++ L Q LT + R K E I ILG ++F+++ L Sbjct: 29 DANLLLQAVTKKSKAMLFAFGETHLSHDQLAELTLLLQRRQKGEPIAYILGEKEFWSLPL 88 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 +S T PRP+TE +V+ AL ++ R+E++ + ILDLGTGTGA+ LAL E K V Sbjct: 89 KVSKHTLIPRPDTERVVEIALDWAYKRLEQQTNLHILDLGTGTGAIALALASELG-DKAV 147 Query: 126 --GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDC 182 VDI +A+ +A+ N G ++ LQSDWF++++ FD+IVSNPPYI+ + Sbjct: 148 ITAVDIKAEAVSLAEENRQHLGF-KQVTFLQSDWFNALQSQQFDLIVSNPPYIDKTDENL 206 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 +VR F+P +L GLS I + +L G +E G+ Q V + F+ Sbjct: 207 KLGDVR-FEPLSALVSAQQGLSDLYKIIENAPLYLTAKGALILEHGWQQATAVQQFFQHY 265 Query: 243 KLFLVNAFKDYGGNDRV 259 + +++DY G DRV Sbjct: 266 DWDEIQSWQDYAGLDRV 282 >gi|262041833|ref|ZP_06015018.1| protein methyltransferase HemK [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259040825|gb|EEW41911.1| protein methyltransferase HemK [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 283 Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 92/258 (35%), Positives = 134/258 (51%), Gaps = 8/258 (3%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 RD+ L VTG + ++ ++ L + L +VR + E I ++G R+F+++ Sbjct: 23 RDAEILLGHVTGRARTWILAFGETTLSADEAARLEALLVRRHRGEPIAHLVGQREFWSLP 82 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L +S T PRP+TE LV+ ALA LP RILDLGTGTGA+ LAL E P + Sbjct: 83 LFVSPATLIPRPDTECLVEQALA-RLPTAP----CRILDLGTGTGAIALALASERPDCEV 137 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCL 183 VD+ A+ +A NA G++ QSDWFS+++G F IVSNPPYI++ Sbjct: 138 TAVDVMPDAVALALRNAEHLGIAN-VTISQSDWFSALDGQRFATIVSNPPYIDAADPHLA 196 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 +VR F+P +L G GL+ I ++L G +E G+ Q V +F Sbjct: 197 EGDVR-FEPLTALVAGDQGLADLAHIIREGRQYLQPGGWMLLEHGWTQGEAVRALFREAG 255 Query: 244 LFLVNAFKDYGGNDRVLL 261 V +DYG N+R+ L Sbjct: 256 YLDVATCRDYGDNERLTL 273 >gi|237807597|ref|YP_002892037.1| modification methylase, HemK family [Tolumonas auensis DSM 9187] gi|237499858|gb|ACQ92451.1| modification methylase, HemK family [Tolumonas auensis DSM 9187] Length = 282 Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 92/258 (35%), Positives = 128/258 (49%), Gaps = 7/258 (2%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A D+ LC V + + P+ L Q + VR + E + ILG R+F++ Sbjct: 20 AALDADCLLCAVLSCTRTYLRTWPEQELTPEQVAQVEQFAVRREQGEPVAYILGVREFWS 79 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +S T PRP+TE LV+ AL E+ + LDLGTGTGA+ LAL E P Sbjct: 80 LPLQVSPATLIPRPDTEALVEWALTL---LSEQGQGQKALDLGTGTGAIALALKSEFPAL 136 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVD 181 ++ AL++A+ NA G S F L S+WFS++ E F +IVSNPPYI++ Sbjct: 137 AMWALEREPAALDLARRNAARLGFSVNF--LASNWFSALNERNFQLIVSNPPYIDAADPH 194 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P +L DGL+ R I D +L G +E G+ Q V + S Sbjct: 195 LAQGDVR-FEPHSALVADEDGLADIRQIIDQAPEYLAAGGWLLLEHGWQQAEAVRDLLSS 253 Query: 242 RKLFLVNAFKDYGGNDRV 259 R V D GG DRV Sbjct: 254 RGFQAVTTKSDLGGQDRV 271 >gi|262274707|ref|ZP_06052518.1| Polypeptide chain release factor methylase [Grimontia hollisae CIP 101886] gi|262221270|gb|EEY72584.1| Polypeptide chain release factor methylase [Grimontia hollisae CIP 101886] Length = 281 Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 89/257 (34%), Positives = 128/257 (49%), Gaps = 8/257 (3%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ LC V S + D L + + + R E + I+G+RDF+++RL Sbjct: 27 DASVLLCHVLDKPSSYLYTWSDKALTEDEEAAFNTLLARRKTGEPVAYIIGYRDFWSLRL 86 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 + T PRP+TE LV+ AL R+ + D +LDLGTGTGA+ LA+ E Sbjct: 87 NVEPSTLIPRPDTERLVELALE----RLPQGDGA-VLDLGTGTGAIALAIASERKDIAVT 141 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLG 184 GVD+ +A+ +A N + NG++ +QS WFS+V F +IVSNPPYI+ Sbjct: 142 GVDLRAEAVALAMKNGLENGINNA-QFMQSSWFSNVPAQRFSMIVSNPPYIDPEDPHLSQ 200 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 +VR F+P+ +L G GL+ R I +L G +E GY+Q V +F Sbjct: 201 GDVR-FEPKSALVSGEHGLADIRVICQQSPEYLVDGGWLLIEHGYDQGEAVRTLFCGAGF 259 Query: 245 FLVNAFKDYGGNDRVLL 261 V DY G DRV L Sbjct: 260 IDVETQHDYAGLDRVTL 276 >gi|283856489|ref|YP_163245.2| Modification methylase HemK family protein [Zymomonas mobilis subsp. mobilis ZM4] gi|283775493|gb|AAV90134.2| Modification methylase HemK family protein [Zymomonas mobilis subsp. mobilis ZM4] Length = 286 Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 84/253 (33%), Positives = 137/253 (54%), Gaps = 10/253 (3%) Query: 17 LSSHQVIVDPDSVL-----DDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDT 71 L +H + ++ D++L + AI R ++E + ILG+RDF+ +RLT++ D Sbjct: 39 LMAHSLGIERDALLLGSWGEKEAPLSFFEAIKRRKQNEPVAYILGYRDFWTLRLTVTPDV 98 Query: 72 FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131 PRP++E L+++A+A+ R + ILDLGTG+GA+ LA L E KG+GVD S Sbjct: 99 LIPRPDSETLIETAIAYF--REQAFLPENILDLGTGSGALLLAALDEWKDAKGLGVDASP 156 Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFD 191 +A++IA+ NA G R + W ++ FD+++ NPPYI + + +V ++ Sbjct: 157 EAIKIARLNADKCGALPRVEFKIGHWGRGIQQKFDLLLCNPPYIARDAM--MPADVLHYE 214 Query: 192 PRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK 251 P ++L G +GL YR I G+ L + G+ +EIG++Q +V I + L F Sbjct: 215 PHLALFSGDEGLDDYREIIPGIPSLLTERGIACLEIGFDQAENVSMIAKETGL-RSRIFY 273 Query: 252 DYGGNDRVLLFCR 264 D R +L R Sbjct: 274 DLEQRPRCVLLSR 286 >gi|330009866|ref|ZP_08306622.1| protein-(glutamine-N5) methyltransferase [Klebsiella sp. MS 92-3] gi|328534692|gb|EGF61257.1| protein-(glutamine-N5) methyltransferase [Klebsiella sp. MS 92-3] Length = 283 Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 92/258 (35%), Positives = 133/258 (51%), Gaps = 8/258 (3%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 RD+ L VTG + ++ ++ L + L +VR + E I ++G R+F+++ Sbjct: 23 RDAEILLGHVTGRARTWILAFGETTLSADEAARLEALLVRRQRGEPIAHLVGQREFWSLP 82 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L +S T PRP+TE LV+ ALA LP RILDLGTGTGA+ LAL E P + Sbjct: 83 LFVSPATLIPRPDTECLVEQALA-RLPTAP----CRILDLGTGTGAIALALASERPDCEV 137 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCL 183 VD+ A+ +A NA G++ QSDWFS ++G F IVSNPPYI++ Sbjct: 138 TAVDVMPDAVALALRNAEHLGIAN-VTISQSDWFSELDGQRFATIVSNPPYIDAADPHLA 196 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 +VR F+P +L G GL+ I ++L G +E G+ Q V +F Sbjct: 197 EGDVR-FEPLTALVAGDQGLADLAHIIREGRQYLQPGGWMLLEHGWTQGEAVRALFREAG 255 Query: 244 LFLVNAFKDYGGNDRVLL 261 V +DYG N+R+ L Sbjct: 256 YLDVATCRDYGDNERLTL 273 >gi|153868970|ref|ZP_01998684.1| hemK protein [Beggiatoa sp. PS] gi|152074464|gb|EDN71316.1| hemK protein [Beggiatoa sp. PS] Length = 280 Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 79/256 (30%), Positives = 136/256 (53%), Gaps = 9/256 (3%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ LC + ++ ++ P+ +L + Q + R ++ I ++G + F++ L Sbjct: 25 DAEILLCHILNVTRSYLLAWPEKILTENQYAQFQALLTRRVQGVPIAYLIGSKAFWSFDL 84 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 ++ +T PRPETELLV+ LA R+ +++DLGTG+GA+ LA+ KE P+ + + Sbjct: 85 QVTKNTLIPRPETELLVEQVLA----RLPPDSDAQVIDLGTGSGAIALAIAKERPYCRLL 140 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDC-L 183 D + +AL++A++NA G L SDW+S++ + ++VSNPPY+ DC L Sbjct: 141 ATDNATEALQVAQANAQHLGF-HPIKFLLSDWWSALGDIKATIVVSNPPYVAE--NDCHL 197 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 +PR +L G+DGL+ R + HL +G +E GY+Q V ++FE + Sbjct: 198 TQGDVHHEPRNALVAGVDGLTDIRALVKESLSHLEINGWLLLEHGYDQGEAVQQLFEQQG 257 Query: 244 LFLVNAFKDYGGNDRV 259 + + D G RV Sbjct: 258 YQAIETYYDLAGLPRV 273 >gi|297182636|gb|ADI18794.1| methylase of polypeptide chain release factors [uncultured SAR11 cluster bacterium HF4000_37C10] Length = 279 Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 75/226 (33%), Positives = 128/226 (56%), Gaps = 9/226 (3%) Query: 38 LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97 +AI R + E + I+G ++F++ ++ T PRPETELL+ + F K Sbjct: 57 FNHAIKRRINREPVAYIIGKKEFWSQDFAVNHATLVPRPETELLIYKVVDFF-----KNK 111 Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV--SERFDTLQS 155 + ILD+GTG+G + L++LKE F +GVG+DIS KA++ A+ N+ + +F Sbjct: 112 RINILDIGTGSGCILLSILKELDFSRGVGIDISTKAIKTAQINSKNLNLFHQSKFKVFDI 171 Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215 F+ G +D+IVSNPPYI S + L ++ +++P ++L+GG+DGL R + + Sbjct: 172 SKFNV--GKYDLIVSNPPYIPSKDIKNLSKDIINYEPLVALNGGLDGLDLIRKVIYKSNS 229 Query: 216 HLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 L ++GL ++EIG+NQ + V + + ++ DY N R ++ Sbjct: 230 LLKRNGLLAIEIGFNQYLKVSSLLKQYGFREMSRQCDYNHNVRCII 275 >gi|308186586|ref|YP_003930717.1| possible protoporphyrinogen oxidase [Pantoea vagans C9-1] gi|308057096|gb|ADO09268.1| possible protoporphyrinogen oxidase [Pantoea vagans C9-1] Length = 277 Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 95/258 (36%), Positives = 135/258 (52%), Gaps = 8/258 (3%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 RD+ L VTG S +I ++ L D Q L + + R + E + ++G R+F+++ Sbjct: 22 RDAEILLGFVTGKSRSWLIAFDETALSDAQLAQLDSLLARRARGEPVAHLVGEREFWSLP 81 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L +S T PRP+TELLV+ ALA LP ILD+GTGTGA+ LAL E P + Sbjct: 82 LRVSDATLIPRPDTELLVEQALAH-LPATPS----TILDMGTGTGAIALALASERPDCQV 136 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCL 183 GVD A+E+A SNA +S L S WF ++ F +IVSNPPYI++ Sbjct: 137 TGVDRIEAAVELAGSNAEQLNLSNT-TFLLSHWFQALTPQHFTLIVSNPPYIDASDTHLE 195 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 +VR F+PR +L GL+ RT+ + L G +E G+ Q V + ++ Sbjct: 196 QGDVR-FEPRSALVADEAGLADLRTLIEQAPAWLLPGGWLLLEHGWQQGEAVATLMQNNG 254 Query: 244 LFLVNAFKDYGGNDRVLL 261 V +DYGGN RV L Sbjct: 255 YHAVETVRDYGGNPRVTL 272 >gi|167759399|ref|ZP_02431526.1| hypothetical protein CLOSCI_01746 [Clostridium scindens ATCC 35704] gi|167662956|gb|EDS07086.1| hypothetical protein CLOSCI_01746 [Clostridium scindens ATCC 35704] Length = 283 Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 92/275 (33%), Positives = 132/275 (48%), Gaps = 40/275 (14%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 +A D+ L TG+S DPD + +K E R LG+ + Sbjct: 26 EAALDAWYLLEFATGISKASYYGDPD----------------KEIKEEEAARYLGYIEIR 69 Query: 62 NVRLTLSSDTFE----------------PRPETELLVDSALAFSLPRIEKRDVVRILDLG 105 R+ L T E PR +TE LV+ AL P ++ +LDL Sbjct: 70 KSRIPLQHITKEQAFMGYPFYVDEHVLIPRQDTETLVEEALKVLKPGMQ------VLDLC 123 Query: 106 TGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF 165 TG+G + ++L+K G G DIS ALE+A+ NA V+ F ++S F + G + Sbjct: 124 TGSGCILISLMKMCKGLYGTGSDISEDALEVARKNACRLEVNAAF--IRSSLFEHISGRY 181 Query: 166 DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225 D+IVSNPPYI + +++ L EVR +DP I+LDG DGL YR I R+L +G Sbjct: 182 DLIVSNPPYIPTSVIEGLQEEVRLYDPFIALDGKEDGLYFYREIIKAGIRYLRPEGYLMF 241 Query: 226 EIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 EIGY+Q +V + E + + KD G DRV+ Sbjct: 242 EIGYDQGNEVACLMEKQGYRNILVKKDLAGLDRVV 276 >gi|227355361|ref|ZP_03839762.1| protein methyltransferase (protein-glutamine N-methyltransferase) [Proteus mirabilis ATCC 29906] gi|227164585|gb|EEI49456.1| protein methyltransferase (protein-glutamine N-methyltransferase) [Proteus mirabilis ATCC 29906] Length = 282 Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 91/258 (35%), Positives = 136/258 (52%), Gaps = 12/258 (4%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 RD+ L VT + +I ++VL + + L++ + R +K E I ++G R+F+++ Sbjct: 22 RDAEILLGHVTKRARTYLIAFSETVLLEDELVQLSSLLARRIKGEPIAYLVGEREFWSLP 81 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEK--RDVVRILDLGTGTGAVCLALLKESPFF 122 L +S T PRP+TE LV+ AL EK RILDLGTGTGA+ LA+ E Sbjct: 82 LKVSPATLIPRPDTECLVEKAL-------EKLSAQASRILDLGTGTGAIALAIASERSDC 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181 + +GVD +A+ +A NA +S + +S WFSS+ G FD+I+SNPPYI+ Sbjct: 135 RVLGVDFQPEAVALAIENAQHLALS-NVEFTESCWFSSLSGYQFDMIISNPPYIDEEDEH 193 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P +L G + I + L +G +E G+ Q V IF Sbjct: 194 LYQGDVR-FEPLTALVAADHGFADIELIITNARQFLANNGWVLIEHGWQQGERVRNIFID 252 Query: 242 RKLFLVNAFKDYGGNDRV 259 + V F+DYGGN+RV Sbjct: 253 KGYCCVETFRDYGGNERV 270 >gi|154482490|ref|ZP_02024938.1| hypothetical protein EUBVEN_00157 [Eubacterium ventriosum ATCC 27560] gi|149736691|gb|EDM52577.1| hypothetical protein EUBVEN_00157 [Eubacterium ventriosum ATCC 27560] Length = 237 Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 79/210 (37%), Positives = 118/210 (56%), Gaps = 5/210 (2%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110 + I G ++F + ++ D PR +TELLV++A+ + + K DV +LD+ TG+G Sbjct: 28 LQHITGSQEFMGLDFKVNEDVLIPRQDTELLVENAITYI--KSVKGDV-DVLDMCTGSGC 84 Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170 + +++ + K VD S KAL +AK N N F QSD F +VE +DVIVS Sbjct: 85 IAISIDRLCENAKVTAVDFSEKALVVAKENNALNKADVTF--FQSDLFENVEKQYDVIVS 142 Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230 NPPYI++ ++ L EVR +P ++LDG DGL Y+ IA ++L +G+ EIGY+ Sbjct: 143 NPPYIKTEEIESLMDEVRIHEPMMALDGDCDGLKFYKKIAKEGRQYLRSNGIIFFEIGYD 202 Query: 231 QKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 Q V I E + +KD GNDRV+ Sbjct: 203 QGQTVPAILEENGYKDIKVYKDLSGNDRVV 232 >gi|323496830|ref|ZP_08101867.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Vibrio sinaloensis DSM 21326] gi|323318089|gb|EGA71063.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Vibrio sinaloensis DSM 21326] Length = 286 Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 91/258 (35%), Positives = 133/258 (51%), Gaps = 9/258 (3%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ LC G ++ PD L Q + R +K E + I+G R+F+++ L Sbjct: 29 DAAVLLCHSLGKPRSFLLTWPDKELTTEQIERFEQLLSRRIKGEPVAYIIGEREFWSLPL 88 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 +++ T PRP+TE LV+ AL + + + D ILDLGTGTGA+ LAL E P K Sbjct: 89 SVAPSTLIPRPDTERLVEVALDKA--NLNQGD---ILDLGTGTGAIALALASELPERKVW 143 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCL 183 G+D+ A ++A SNA G++ + WF V+ F +IVSNPPYIE Sbjct: 144 GIDLKIDAQQLASSNADKLGIT-NCEFRAGSWFDPVDAGTQFALIVSNPPYIEENDPHLT 202 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 +VR F+P +L +GL+ + I++ R+L G E GY+Q V I S Sbjct: 203 QGDVR-FEPLSALVAEDNGLADIKHISEHARRYLLAGGWLMFEHGYDQGKAVRDILTSLG 261 Query: 244 LFLVNAFKDYGGNDRVLL 261 + V +KDYG NDRV + Sbjct: 262 YYQVETYKDYGNNDRVTI 279 >gi|116511388|ref|YP_808604.1| methylase of polypeptide chain release factor [Lactococcus lactis subsp. cremoris SK11] gi|116107042|gb|ABJ72182.1| Methylase of polypeptide chain release factor [Lactococcus lactis subsp. cremoris SK11] Length = 271 Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 85/236 (36%), Positives = 123/236 (52%), Gaps = 12/236 (5%) Query: 32 DRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLP 91 D++ LT R +K+E I+GW +FY ++ + PRPETE LV+ L + Sbjct: 45 DQELNLLTELSERLIKNEPPQYIVGWAEFYELKFKVDERVLIPRPETEELVEMILTEN-- 102 Query: 92 RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151 D ++ILD+GTG+GA+ ++L K + DIS ALE+A NA N V+ F Sbjct: 103 ---NNDSLKILDIGTGSGAIAISLAKARQNWSVKASDISQNALELAAENAKMNHVNLEF- 158 Query: 152 TLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIAD 211 +QSD + FD+IVSNPPYI + V ++P ++L GL+ Y+ IAD Sbjct: 159 -IQSDVMDELTDRFDIIVSNPPYIAFDETYEMDDSVIKYEPDLALFAQNQGLAIYQKIAD 217 Query: 212 GVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF---LVNAFKDYGGNDRVLLFCR 264 HL DG +EIGY Q V IF+ + F LV+ +D G DR++ R Sbjct: 218 QAVNHLTDDGKIYLEIGYKQGKAVQAIFQEK--FTDRLVSIHQDIFGKDRMISVKR 271 >gi|317499019|ref|ZP_07957300.1| (glutamine-N5) methyltransferase [Lachnospiraceae bacterium 5_1_63FAA] gi|316893669|gb|EFV15870.1| (glutamine-N5) methyltransferase [Lachnospiraceae bacterium 5_1_63FAA] Length = 283 Score = 130 bits (326), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 85/241 (35%), Positives = 129/241 (53%), Gaps = 10/241 (4%) Query: 27 DSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL 86 D + D I + +H + ILG ++F ++ D PR +TE +++ L Sbjct: 47 DEINDKEAEERYKELIQKRKEHVPLQYILGTQEFMGYTFKVTPDVLIPRADTETVLEEVL 106 Query: 87 AFSLPRIEKRDVVRILDLGTGTG--AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN 144 +P+ K ++ILDL TG+G A+ LAL+ + VG DIS KAL+IAK+N Sbjct: 107 -LKVPQTLKN--LKILDLCTGSGCIAISLALILKPEVC--VGTDISEKALKIAKANGENL 161 Query: 145 GVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204 +F +QSD F +V G +D+I+SNPPYI + L EV+D++P ++LDG DGL Sbjct: 162 APMVKF--IQSDLFENVTGSYDLIISNPPYITTEECGKLMPEVKDYEPMLALDGKEDGLY 219 Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL-FC 263 Y+ I +LN G+ + EIGY+Q V + E++ V KD G DR++ F Sbjct: 220 FYKKIIKEAKNYLNPQGMLAFEIGYDQGEAVKNLMEAQDFACVEIKKDLAGLDRLVFGFA 279 Query: 264 R 264 R Sbjct: 280 R 280 >gi|167629002|ref|YP_001679501.1| methyltransferase, putative [Heliobacterium modesticaldum Ice1] gi|167591742|gb|ABZ83490.1| methyltransferase, putative [Heliobacterium modesticaldum Ice1] Length = 297 Score = 130 bits (326), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 82/236 (34%), Positives = 127/236 (53%), Gaps = 10/236 (4%) Query: 30 LDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFS 89 L D Q+ L I R L + I G ++F+ + ++ PRPETELLV++ALA Sbjct: 57 LTDAQQARLGELIQRRLTGCPLQYITGRQEFWGLDFAVTPAVLIPRPETELLVETALAL- 115 Query: 90 LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS-- 147 L R ++ I D+G G+GA+ +A+ +E P + + D+S AL +A+ NA +GV+ Sbjct: 116 LGRQDR--TAWIADVGVGSGAIAVAMARERPRLQVLATDLSEAALAVARQNAKRHGVAGQ 173 Query: 148 ---ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204 R D L +++ ++SNPPYI S + L EV F+P+++LDGG DGL Sbjct: 174 IRFARGDLLDPAIDAAIR--LKAVLSNPPYIPSGHIPSLQREVAGFEPKLALDGGEDGLD 231 Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 YR +A L G ++EIGYNQ V +F ++ + +D G+DRV+ Sbjct: 232 LYRRLAFKAGLVLEPGGFVALEIGYNQGEAVSSLFAAQGFRDIGLIRDGQGHDRVV 287 >gi|288905237|ref|YP_003430459.1| methyltransferase [Streptococcus gallolyticus UCN34] gi|306831308|ref|ZP_07464468.1| protein-(glutamine-N5) methyltransferase [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|325978213|ref|YP_004287929.1| methyltransferase [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|288731963|emb|CBI13528.1| putative methyltransferase [Streptococcus gallolyticus UCN34] gi|304426544|gb|EFM29656.1| protein-(glutamine-N5) methyltransferase [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|325178141|emb|CBZ48185.1| methyltransferase [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 276 Score = 130 bits (326), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 80/244 (32%), Positives = 128/244 (52%), Gaps = 14/244 (5%) Query: 23 IVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLV 82 I+ + + ++ + L + + +H S I G F ++ L++ PRPETE LV Sbjct: 40 ILHQNQAITEKDQMLLEQIMAQLTEHRSPQYITGKAYFRDLELSVDERVLIPRPETEELV 99 Query: 83 DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142 D L + R +R+LD+GTG+GA+ ++L P ++ DIS AL++AK NA+ Sbjct: 100 DLVL-----KENSRADLRVLDIGTGSGAIAISLKAARPNWQVTASDISADALQLAKENAL 154 Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202 N V +QSD FS + FD+I+SNPPYI D +G+ V +P ++L DG Sbjct: 155 KNQVE--LTLIQSDVFSQITERFDMIISNPPYIAYDDEDEVGINVLASEPHLALFADEDG 212 Query: 203 LSHYRTIADGVSRHLNKDGLCSVEIGYNQ----KVDVVRIFESRKLFLVNAFKDYGGNDR 258 + YR I + S HL ++G EIGY Q + + + F +++ V KD G DR Sbjct: 213 FAIYRQIIENASEHLTENGKLYFEIGYKQGEGLRALLSKHFPAKR---VRVIKDMFGKDR 269 Query: 259 VLLF 262 +++ Sbjct: 270 MVVM 273 >gi|125623425|ref|YP_001031908.1| putative protoporphyrinogen oxidase [Lactococcus lactis subsp. cremoris MG1363] gi|124492233|emb|CAL97162.1| putative protoporphyrinogen oxidase [Lactococcus lactis subsp. cremoris MG1363] gi|300070172|gb|ADJ59572.1| putative protoporphyrinogen oxidase [Lactococcus lactis subsp. cremoris NZ9000] Length = 270 Score = 130 bits (326), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 84/232 (36%), Positives = 122/232 (52%), Gaps = 12/232 (5%) Query: 32 DRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLP 91 D++ LT R +K+E I+GW +FY ++ + PRPETE LV+ L + Sbjct: 45 DQELNLLTELSERLIKNEPPQYIVGWAEFYELKFKVDERVLIPRPETEELVEMILTEN-- 102 Query: 92 RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151 D ++ILD+GTG+GA+ ++L K + DIS ALE+A NA N V+ F Sbjct: 103 ---NNDSLKILDIGTGSGAIAISLAKARQNWSVKASDISQNALELAAENAKMNHVNLEF- 158 Query: 152 TLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIAD 211 +QSD + FD+IVSNPPYI + V ++P ++L GL+ Y+ IAD Sbjct: 159 -IQSDVMDELTDRFDIIVSNPPYIAFDETYEMDDSVIKYEPDLALFAKNQGLAIYQKIAD 217 Query: 212 GVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF---LVNAFKDYGGNDRVL 260 HL DG +EIGY Q V IF+ + F LV+ +D G DR++ Sbjct: 218 QAVNHLTDDGKIYLEIGYKQGKAVQAIFQEK--FTDRLVSIHQDIFGKDRMI 267 >gi|269468199|gb|EEZ79892.1| HemK family modification methylase [uncultured SUP05 cluster bacterium] Length = 262 Score = 130 bits (326), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 78/208 (37%), Positives = 116/208 (55%), Gaps = 15/208 (7%) Query: 56 GWRDFYNVRLTLSSDTFEPRPETELLVDSAL-AFSLPRIEKRDVVRILDLGTGTGAVCLA 114 G + FY++ ++ DT PRPETELL+D AL F+ +K + +LDLGTG+G + + Sbjct: 64 GKKGFYHLDFKVTPDTLIPRPETELLIDIALDLFN----DKEEPCHLLDLGTGSGIIAIT 119 Query: 115 LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPP 173 L ++P + DIS AL++AK+N + + Q WF +V FD+I+SNPP Sbjct: 120 LADKNPHWTVSATDISQAALDVAKTN-----TTAQVSFFQGSWFEAVPSQTFDLIISNPP 174 Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233 YIE D L+ F+P+ +L G DGL+ R I HLNK G +E G++Q+ Sbjct: 175 YIEQ---DDPYLDDLLFEPQTALVSGEDGLNDIRIIISDAPEHLNKGGYLLLEYGFDQQE 231 Query: 234 DVVRIFESRKLFLVNAFKDYGGNDRVLL 261 +V + + K + FKDY NDR +L Sbjct: 232 RIVDLL-NEKFHHIKTFKDYNNNDRAVL 258 >gi|108804487|ref|YP_644424.1| HemK family modification methylase [Rubrobacter xylanophilus DSM 9941] gi|108765730|gb|ABG04612.1| modification methylase, HemK family [Rubrobacter xylanophilus DSM 9941] Length = 280 Score = 130 bits (326), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 84/224 (37%), Positives = 127/224 (56%), Gaps = 10/224 (4%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101 I R LK E + RILG+ F N++L L+ DT PRP+TE +V++AL RI+ R + R+ Sbjct: 58 ISRRLKREPVQRILGYAYFRNLKLYLNEDTLIPRPDTESVVEAALE----RIDARPL-RV 112 Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 LD+GTG+GA+ +A+ +E P + DIS +ALEIA+ NA NG RF +D S + Sbjct: 113 LDIGTGSGAIAIAIAQERPGCEVHATDISRRALEIARRNADLNGARVRFHL--ADLVSGL 170 Query: 162 E--GLFDVIVSNPPYIESVIVD-CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 G D++VSNPPY++ L EVR++DP I+L G D + +R I + L Sbjct: 171 RLPGGVDLLVSNPPYVDVRGAQRRLAPEVREWDPPIALYSGEDEYAFFRRIFEETPEVLK 230 Query: 219 KDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262 ++ +E+G Q V+ + E R + +D G+ R +L Sbjct: 231 EEADVVLEVGDGQSQKVLEMGEERGFRPLGTRRDLAGDVRAVLL 274 >gi|206603662|gb|EDZ40142.1| Modification methylase (HemK) [Leptospirillum sp. Group II '5-way CG'] Length = 293 Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 86/241 (35%), Positives = 126/241 (52%), Gaps = 15/241 (6%) Query: 29 VLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAF 88 VL D + + R + E H I G F R ++ T PRPETE+LV++ L Sbjct: 58 VLPDELSACYASWVERRCQREPFHLITGSVPFLEDRYAVAPGTLVPRPETEILVENVLRV 117 Query: 89 SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148 ++ R RILDLG G+G + ++LLKE P + + VD S LE+++ NA+ +GV Sbjct: 118 ----LDSRSPQRILDLGCGSGVLGISLLKEFPKARCLAVDRSVMPLEVSRKNALFHGVQS 173 Query: 149 RFDTLQSDWFS--SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206 R + DW ++ FD+IVSNPPYI S + CL E+ ++PR +LDGG DGL Y Sbjct: 174 RIHFIHGDWTEMLRLDQRFDLIVSNPPYIASGDIACLDPEILFYEPREALDGGPDGLVFY 233 Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA-----FKDYGGNDRVLL 261 R + + L+ G+ +VEIG Q F S + + F D G DR++L Sbjct: 234 RRLMAVLPGLLSSGGVAAVEIGSCQG----DFFRSEEGIVSGCGGPLVFPDILGLDRIVL 289 Query: 262 F 262 + Sbjct: 290 W 290 >gi|289577388|ref|YP_003476015.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Thermoanaerobacter italicus Ab9] gi|289527101|gb|ADD01453.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Thermoanaerobacter italicus Ab9] Length = 279 Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 83/216 (38%), Positives = 120/216 (55%), Gaps = 9/216 (4%) Query: 48 HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTG 107 H I+ + F + + + PRPETE+LV+ AL R+++ DVV LD+GTG Sbjct: 66 HIPYQYIVKKQCFMGLEFFVDENVLIPRPETEILVEEALK----RLKRGDVV--LDIGTG 119 Query: 108 TGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LF 165 +GA+ +++ K P VDIS KA+EIAK NA GV +R ++SD F ++ F Sbjct: 120 SGAIAVSIAKYFPDCTVYAVDISKKAIEIAKHNAEKQGVLDRIFFIESDLFCNLPPNLKF 179 Query: 166 DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225 D IVSNPPYI+ ++ L EV+ +P ++LDGG DGL Y+ I ++ G Sbjct: 180 DFIVSNPPYIKKREIELLQEEVKK-EPIVALDGGEDGLFFYKKIIREAPFYIKSGGKIGF 238 Query: 226 EIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 EIGY+QK +V + E V KD G DRV++ Sbjct: 239 EIGYSQKEEVTTLLEESGFKDVEIIKDLAGIDRVII 274 >gi|271500558|ref|YP_003333583.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Dickeya dadantii Ech586] gi|270344113|gb|ACZ76878.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Dickeya dadantii Ech586] Length = 282 Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 93/259 (35%), Positives = 135/259 (52%), Gaps = 10/259 (3%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 RD+ L VT ++ ++ L D + L + + R + E I ++G+R+F+++ Sbjct: 22 RDAEILLEHVTDKRRTFLLAFGETELTDDEVLALESLLARRVNGEPIAYLVGYREFWSLP 81 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L +S T PRP+TE LV+ ALA LP +LDLGTGTGA+ LA+ E P + Sbjct: 82 LAVSPATLIPRPDTECLVEQALAV-LP----DGASSVLDLGTGTGAIALAIAHERPDCQV 136 Query: 125 VGVDISCKALEIAKSNAVTNGV-SERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDC 182 VG+D A+ +A NA G+ + RF L DWFS + G F VIVSNPPYI+ Sbjct: 137 VGIDRQPDAVALASQNARRLGIHNARF--LPGDWFSPLAGQRFAVIVSNPPYIDEHDPHL 194 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 L +VR F+P +L G GL+ + I L DG +E G+ Q V + + Sbjct: 195 LRGDVR-FEPASALVAGAQGLADLQHIIRQAGDFLLDDGWLLLEHGWQQGEAVRGLLSQQ 253 Query: 243 KLFLVNAFKDYGGNDRVLL 261 V ++DYG N+RV L Sbjct: 254 GFVQVKTYRDYGDNERVTL 272 >gi|257452576|ref|ZP_05617875.1| methyltransferase [Fusobacterium sp. 3_1_5R] gi|317059116|ref|ZP_07923601.1| methyltransferase [Fusobacterium sp. 3_1_5R] gi|313684792|gb|EFS21627.1| methyltransferase [Fusobacterium sp. 3_1_5R] Length = 368 Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 77/209 (36%), Positives = 115/209 (55%), Gaps = 7/209 (3%) Query: 54 ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113 ++ W +FY PR +TE+LV+ A SL +++ +ILD+GTGTGA+ + Sbjct: 159 LVKW-EFYGYEFITDERALIPRADTEILVEQAKILSL----EKENPKILDIGTGTGAIAI 213 Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNP 172 L KE P + +G+DIS +AL +AK N V LQS+ F +EG FD+IVSNP Sbjct: 214 TLAKEVPEAEVLGIDISERALSLAKENKEYQFVR-NVSFLQSNLFEKLEGKSFDIIVSNP 272 Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232 PYI + L EV++++P+ +L DG S Y+ I + +LN+ G E+GY Q Sbjct: 273 PYIPQEEYEDLMPEVKNYEPKNALTDAGDGYSFYQRIIQEANDYLNEKGYLLFEVGYQQA 332 Query: 233 VDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 V + E K + +DY G+ RV+L Sbjct: 333 KQVKQWMEEEKFEDLYIAEDYAGHQRVVL 361 >gi|167766741|ref|ZP_02438794.1| hypothetical protein CLOSS21_01247 [Clostridium sp. SS2/1] gi|167711495|gb|EDS22074.1| hypothetical protein CLOSS21_01247 [Clostridium sp. SS2/1] Length = 283 Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 85/241 (35%), Positives = 129/241 (53%), Gaps = 10/241 (4%) Query: 27 DSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL 86 D + D I + +H + ILG ++F ++ D PR +TE +++ L Sbjct: 47 DEINDKEAEERYKELIQKRKEHVPLQYILGTQEFMGYTFKVTPDVLIPRADTETVLEEVL 106 Query: 87 AFSLPRIEKRDVVRILDLGTGTG--AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN 144 +P+ K ++ILDL TG+G A+ LAL+ + VG DIS KAL+IAK+N Sbjct: 107 -LKVPQTLKN--LKILDLCTGSGCIAISLALILKPEVC--VGTDISEKALKIAKANGENL 161 Query: 145 GVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204 +F +QSD F +V G +D+I+SNPPYI + L EV+D++P ++LDG DGL Sbjct: 162 APMVKF--IQSDLFENVTGSYDLIISNPPYITTEECGKLMPEVKDYEPMLALDGKEDGLY 219 Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL-FC 263 Y+ I +LN G+ + EIGY+Q V + E++ V KD G DR++ F Sbjct: 220 FYKKIIKEAKNYLNPQGMLAFEIGYDQGEAVKNLMEAQDFACVEIKKDLAGLDRLVFGFA 279 Query: 264 R 264 R Sbjct: 280 R 280 >gi|14517939|gb|AAK64442.1|AF377339_3 protoporphyrinogen oxidase HemK [Myxococcus xanthus] Length = 293 Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 88/253 (34%), Positives = 126/253 (49%), Gaps = 9/253 (3%) Query: 10 FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69 L V LS ++ VD D L + I R + E + G R+FYN + + Sbjct: 34 LLSHVLKLSRVRLYVDLDRPLSKDELGAYRALIERRMAGEPTQYLTGVREFYNRPFKVDA 93 Query: 70 DTFEPRPETELLVDSALAFSLPRIEKRDVV-RILDLGTGTGAVCLALLKESPFFKGVGVD 128 PRPETELLV++AL R+ +D R LDL TG+G + ++L E P + D Sbjct: 94 RVLIPRPETELLVEAAL-----RMLPKDAPGRALDLCTGSGCIAISLAAERPQATVIATD 148 Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCLGLE 186 +S A +A+ NA GV++R LQ D F+ V F V+VSNPPYI S + L E Sbjct: 149 LSPDACALARENAQALGVADRVTVLQGDLFTPVPAGERFQVVVSNPPYIASGEIPGLSAE 208 Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246 VR +P ++LDGG DGL R + G + L GL ++EIG +Q V+ + + Sbjct: 209 VRR-EPTLALDGGPDGLVAVRRVVTGARQWLEPGGLLALEIGEDQGPAVLELLRAAGYAD 267 Query: 247 VNAFKDYGGNDRV 259 KD +R+ Sbjct: 268 ARVEKDLERRERM 280 >gi|313899751|ref|ZP_07833254.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Clostridium sp. HGF2] gi|312955366|gb|EFR37031.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Clostridium sp. HGF2] Length = 286 Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 82/258 (31%), Positives = 132/258 (51%), Gaps = 12/258 (4%) Query: 10 FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69 ++ +T +H + ++ D + I R L + +LG+ FY R T++ Sbjct: 28 YMLELTNKEAHNLYMEFDEEMQPELEELYEEGIQRLLTGIPLGHVLGFEWFYGYRFTVNE 87 Query: 70 DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129 D PRPETE LV + LA +D V +D+GTG+GA+ ++L KE P + DI Sbjct: 88 DVLIPRPETEELVANILAAYDEHFSSQDNVMAVDIGTGSGAIAVSLKKEEPNLHMMATDI 147 Query: 130 SCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLE 186 S +A+ +AK NA N F D LQ +++ D+++SNPPYI + + Sbjct: 148 SEQAVAVAKKNADDNEAIVNFMVGDMLQPLIDRNLK--VDILISNPPYIPR--EEEMEHS 203 Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246 V D++P ++L GG DGL YR I + ++ L + + + E+GYNQK + E++K F Sbjct: 204 VVDYEPHVALFGGEDGLKFYRIIFENAAKVLKERAMMAFEMGYNQKEALSE--EAKKYFP 261 Query: 247 ---VNAFKDYGGNDRVLL 261 + KD G +R+L Sbjct: 262 NARIEVLKDMSGKNRMLF 279 >gi|51596332|ref|YP_070523.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Yersinia pseudotuberculosis IP 32953] gi|170024409|ref|YP_001720914.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Yersinia pseudotuberculosis YPIII] gi|186895375|ref|YP_001872487.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Yersinia pseudotuberculosis PB1/+] gi|51589614|emb|CAH21244.1| putative protoporphyrinogen oxidase [Yersinia pseudotuberculosis IP 32953] gi|169750943|gb|ACA68461.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Yersinia pseudotuberculosis YPIII] gi|186698401|gb|ACC89030.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Yersinia pseudotuberculosis PB1/+] Length = 276 Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 88/257 (34%), Positives = 131/257 (50%), Gaps = 7/257 (2%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 RD+ L VTG + ++ ++ + Q +L R + E I ++G R+F+++ Sbjct: 22 RDAEILLSFVTGKARTYLLAFGETEITAEQLLWLETLANRREQGEPIAYLVGEREFWSLP 81 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L++SS T PRP+TE LV+ ALA LP + RILDLGTGTGA+ LAL E Sbjct: 82 LSVSSATLIPRPDTECLVEQALA-RLPSMP----CRILDLGTGTGAIALALASERRDCAV 136 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184 + VDI+ A+ +A+ NA + + LQ WF V G F +I SNPPYI++ Sbjct: 137 IAVDINADAVALARHNAKKLAI-DNVCFLQGSWFEPVSGRFALIASNPPYIDANDPHLNE 195 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 +VR ++P +L +G++ I +L G +E G+ Q V ++ Sbjct: 196 GDVR-YEPHSALVAAAEGMADLAAIVSQAPGYLEPGGWLMLEHGWQQANAVQERLKNSGF 254 Query: 245 FLVNAFKDYGGNDRVLL 261 V KDYG NDRV L Sbjct: 255 SAVMTCKDYGNNDRVTL 271 >gi|322832985|ref|YP_004213012.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Rahnella sp. Y9602] gi|321168186|gb|ADW73885.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Rahnella sp. Y9602] Length = 289 Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 94/259 (36%), Positives = 133/259 (51%), Gaps = 10/259 (3%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 RD+ L VTG + ++ +++L Q L + R + E + + G R+F+++ Sbjct: 22 RDAEILLGFVTGRARTFIMAFGETLLTAGQLQQLEILLARREQGEPVAYLTGEREFWSLP 81 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L++S T PRP+TE LV+ AL LP V ILDLGTGTGA+ LAL E P K Sbjct: 82 LSVSPATLIPRPDTECLVEQAL-IRLPS----QPVSILDLGTGTGAIALALASERPDCKV 136 Query: 125 VGVDISCKALEIAKSNAVT-NGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDC 182 GVD+ A+ +A+ NA N ++ RF L WFS V G F +I SNPPYI++ Sbjct: 137 TGVDLQPDAVRLAQHNAQKLNILNARF--LPGSWFSPVAGERFALIASNPPYIDAADPHL 194 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 +VR F+P +L GL+ I +L+K G +E G+ Q DV + Sbjct: 195 AKGDVR-FEPASALVAENAGLADLAHIIQAAPAYLHKGGWLLLEHGWQQATDVQALLRDA 253 Query: 243 KLFLVNAFKDYGGNDRVLL 261 + KDYG NDRV L Sbjct: 254 GYQHIATVKDYGDNDRVSL 272 >gi|110833385|ref|YP_692244.1| methyltransferase [Alcanivorax borkumensis SK2] gi|110646496|emb|CAL15972.1| methyltransferase [Alcanivorax borkumensis SK2] Length = 280 Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 95/260 (36%), Positives = 136/260 (52%), Gaps = 10/260 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A D+ LC V S + P+ L Q+ + R + E + ++G R+F+ Sbjct: 20 AALDAQVLLCHVLEQSRTWLFTWPERELTRAQQAEFEALLARREQGEPVAHLIGEREFFG 79 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 R ++++DT PRP+TE LV+ LA +LP R++DLGTGTGA+ + L E P + Sbjct: 80 RRFSVTADTLIPRPDTETLVEQVLALALPA-----NARVVDLGTGTGAIGITLALEQPAW 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182 + VD S AL++A +NA G + R LQ W + +G FD++VSNPPYIE V Sbjct: 135 QVTLVDNSAAALQVAAANARQLGATVR--CLQGSWLTPCDGFFDLVVSNPPYIEDGDVHL 192 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 +VR F+PR +L G GL+ TIA + L G +E G+ Q D VR + Sbjct: 193 AQGDVR-FEPRSALVAGDQGLADLITIAQQAAGKLVAGGWLLLEHGFEQG-DAVRALLAD 250 Query: 243 KLFL-VNAFKDYGGNDRVLL 261 F V +D GGNDRV L Sbjct: 251 IGFEDVRTEQDLGGNDRVTL 270 >gi|327481906|gb|AEA85216.1| methyl transferase [Pseudomonas stutzeri DSM 4166] Length = 275 Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 91/258 (35%), Positives = 135/258 (52%), Gaps = 10/258 (3%) Query: 6 DSHSFLCRVTGLSSHQVIVDPD-SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 D+ L G S+ + P+ V D F + + R + E + ILG + F+++ Sbjct: 22 DAEWLLAAALGKSTSYLRTWPEREVPGDLAERFAAD-LARRRRGEPVAYILGRQGFWSLE 80 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L ++ DT PRP+TELLV++AL LP R+LDLGTGTGA+ LAL E P ++ Sbjct: 81 LEVAPDTLIPRPDTELLVETALQL-LPATP----ARVLDLGTGTGAIALALAAERPQWQV 135 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183 GVD A+ +A+ N + G+ +SDWF+ V G F +IVSNPPYI + Sbjct: 136 SGVDRIEAAVVLAERNRLRLGLGNAHFA-RSDWFAEVTGERFQLIVSNPPYIPASDPHLQ 194 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 +VR F+P+ +L G+DGL RTI HL G +E G++Q V + + Sbjct: 195 QGDVR-FEPQSALVAGVDGLDDIRTIIAQAPAHLTAGGWLLLEHGFDQAPAVRSLMAAHG 253 Query: 244 LFLVNAFKDYGGNDRVLL 261 + +D GG++RV L Sbjct: 254 FEACESRRDLGGHERVSL 271 >gi|27363733|ref|NP_759261.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Vibrio vulnificus CMCP6] gi|320157138|ref|YP_004189517.1| methylase of polypeptide chain release factors [Vibrio vulnificus MO6-24/O] gi|27359849|gb|AAO08788.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Vibrio vulnificus CMCP6] gi|319932450|gb|ADV87314.1| methylase of polypeptide chain release factors [Vibrio vulnificus MO6-24/O] Length = 291 Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 89/258 (34%), Positives = 131/258 (50%), Gaps = 9/258 (3%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ LC V + PD +L ++++ + R L E + I+G R+F+++ Sbjct: 29 DAAVLLCHVLDKPRSYLFTWPDKILTEQEQQQFEALVARRLSGEPVAYIIGEREFWSLPF 88 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 ++ T PRP+TE LV+ AL + ILDLGTGTGA+ +AL E P + Sbjct: 89 KVAPSTLIPRPDTERLVELALEKT-----ATQTGSILDLGTGTGAIAIALASELPHRTVM 143 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGL-FDVIVSNPPYIESVIVDCL 183 GVD+ +A +A+SNA+ + + Q WF V +G F +IVSNPPYI+ Sbjct: 144 GVDLQQEAKLLAESNALALNI-KNVTFKQGSWFEPVAQGTKFALIVSNPPYIDENDPHLN 202 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 +VR F+P+ +L GL+ R IA +L G E GY+Q + V I ++ Sbjct: 203 QGDVR-FEPKSALVAEESGLADIRYIAQQARDYLEPHGWLMFEHGYDQGIAVREILDTLG 261 Query: 244 LFLVNAFKDYGGNDRVLL 261 V KDYGGNDRV L Sbjct: 262 YQEVATEKDYGGNDRVTL 279 >gi|281200544|gb|EFA74762.1| hypothetical protein PPL_11794 [Polysphondylium pallidum PN500] Length = 437 Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 93/257 (36%), Positives = 130/257 (50%), Gaps = 20/257 (7%) Query: 24 VDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVD 83 + P L D Q + I R K E I I+G+R F+ + T PRP++E L+D Sbjct: 178 IPPTLNLTDSQYQQFSELISRRFKDEPIAYIVGYRYFWKHQFRCDRSTLIPRPDSETLID 237 Query: 84 SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143 + L E ILDLGTGTG + L+LL E P GVGVD S ALEIAK N+++ Sbjct: 238 QIVM--LREYENFSPTNILDLGTGTGCLLLSLLNEFPNATGVGVDQSLDALEIAKYNSIS 295 Query: 144 -------------NGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCLGLEVR 188 N ++ R + +QS+W SS+ + +I+SNPPYI L V+ Sbjct: 296 IDKQNSSDNNSSNNIINNRVEFIQSNWLSSLSNNKKYQLIISNPPYISHSDYINLNPTVK 355 Query: 189 DFDPRISLDGGIDGLSHYRTIADGVSRH--LNKD-GLCSVEIGYNQKVDVVRIFESRKLF 245 F+P+ +L +GL Y IA + L++D GL EIG NQ+ D+++I ES Sbjct: 356 LFEPKTALVADNNGLKDYEIIAKSIVDKDILDRDNGLVVFEIGMNQENDIIKIMESNGFE 415 Query: 246 LVNAFKDYGGNDRVLLF 262 L KD G R L+F Sbjct: 416 LKCQGKDLGRIIRCLVF 432 >gi|302879737|ref|YP_003848301.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Gallionella capsiferriformans ES-2] gi|302582526|gb|ADL56537.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Gallionella capsiferriformans ES-2] Length = 288 Score = 129 bits (325), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 90/251 (35%), Positives = 130/251 (51%), Gaps = 9/251 (3%) Query: 10 FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69 L V G++ ++ P+ +L R+ R L E I +LG R+F+ + ++ Sbjct: 41 LLQSVLGVNRAYLLTHPERILTVRETARYVELFARRLAGEPIAYLLGEREFFGLNFKVTP 100 Query: 70 DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129 T PRP+TELLV+ AL +P +LD+GTG+GA+ L++ +E P + V VD Sbjct: 101 ATLIPRPDTELLVEMALQH-IPAGGA-----VLDMGTGSGAIALSIARERPDARVVAVDA 154 Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVR 188 S AL +A NA + R L+SDWFS++ G FD+I SNPPYIE+ V +VR Sbjct: 155 SEAALIVAAENAQRLNLG-RVRLLRSDWFSALSGERFDLIASNPPYIENGDVHLSLGDVR 213 Query: 189 DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN 248 F+P +L G DGL R I +LN G E GYNQ V + + F V+ Sbjct: 214 -FEPLSALASGADGLDDIRRIIVEAKAYLNAGGWLMFEHGYNQAERVRGLLQDAGFFGVS 272 Query: 249 AFKDYGGNDRV 259 + D G +RV Sbjct: 273 SVLDLSGIERV 283 >gi|327474248|gb|EGF19655.1| protein-(glutamine-N5) methyltransferase [Streptococcus sanguinis SK408] Length = 276 Score = 129 bits (325), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 86/235 (36%), Positives = 124/235 (52%), Gaps = 16/235 (6%) Query: 30 LDDRQRFFLTNAIVRSL-KHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAF 88 L+DR++ AI L H+ I+G DF+ + L + PRPETE LV+ L+ Sbjct: 49 LEDREQL---KAIQEQLLAHKPAQYIIGSSDFHGLTLKVDERVLIPRPETEELVELILSE 105 Query: 89 SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148 + + + ILD+GTG+GA+ L L P ++ D+S AL +A NA + G+S Sbjct: 106 N-----RESSLSILDIGTGSGAIALTLANSRPDWQITASDLSGDALSLATENAQSCGLSL 160 Query: 149 RFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208 F +QSD F ++ G FD+IVSNPPYI D +GL V +P ++L DG + YR Sbjct: 161 TF--IQSDCFEAISGNFDIIVSNPPYISEADKDEVGLNVLTSEPHMALFAEEDGYAVYRK 218 Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF---LVNAFKDYGGNDRVL 260 IA+ HL K G +EIGY Q V + +K F + KD G DR++ Sbjct: 219 IAEQAGDHLTKKGKIYLEIGYKQGDGVRELL--KKSFPQKRIRVLKDQFGKDRMV 271 >gi|325660745|ref|ZP_08149373.1| hypothetical protein HMPREF0490_00105 [Lachnospiraceae bacterium 4_1_37FAA] gi|325472819|gb|EGC76029.1| hypothetical protein HMPREF0490_00105 [Lachnospiraceae bacterium 4_1_37FAA] Length = 277 Score = 129 bits (325), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 83/226 (36%), Positives = 121/226 (53%), Gaps = 10/226 (4%) Query: 35 RFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIE 94 R+F + I R + + I G ++F + ++ PR +TE+LV+ AL+ L E Sbjct: 56 RYF--DCISRRAQRIPLQHITGEQEFMGLPFIVNEHVLIPRQDTEILVEEALS-HLSGNE 112 Query: 95 KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154 + +LD+ TG+G + ++L + VG DIS +AL++AK NA + F L+ Sbjct: 113 Q-----VLDMCTGSGCILISLEHYRKGIRAVGADISDEALQVAKRNAESLNADVTF--LK 165 Query: 155 SDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214 SD F V +D+IVSNPPYI + ++ L EVR DP I+LDG DGL YR I + Sbjct: 166 SDLFEQVAERYDLIVSNPPYIRTKAIEELEEEVRLHDPMIALDGKEDGLYFYRKITEKSR 225 Query: 215 RHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 HL + G EIGY+Q DV ++ E V KD G DRV+ Sbjct: 226 EHLKQGGCLLFEIGYDQGEDVAKMMEKAGFTEVTVKKDLAGLDRVV 271 >gi|256821857|ref|YP_003145820.1| HemK family modification methylase [Kangiella koreensis DSM 16069] gi|256795396|gb|ACV26052.1| modification methylase, HemK family [Kangiella koreensis DSM 16069] Length = 286 Score = 129 bits (325), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 83/241 (34%), Positives = 127/241 (52%), Gaps = 17/241 (7%) Query: 26 PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85 P+ +L + Q+ + I R + E I+G ++F+++ L ++ DT PRPETE+LV+ A Sbjct: 52 PEYLLSEDQKSCFEDFISRRRQGEPTAYIIGEQEFWSLTLNVTRDTLIPRPETEMLVEQA 111 Query: 86 LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145 L RI + I+DLGTG+GA+ LA+ E P +D+S AL++A++NA +N Sbjct: 112 LL----RIPSDESYSIVDLGTGSGAIALAIASERPQATVWALDMSELALKVAQANAESNQ 167 Query: 146 VSE-RFDTLQSDWFSS-VEGLFDVIVSNPPYI---ESVIVDCLGLEVRDFDPRISLDGGI 200 + F+ Q W S+ + G D+IVSNPPY+ + + D + ++P +L Sbjct: 168 IDNVTFE--QGSWLSNWLHGKLDMIVSNPPYVAPNDPHLADLV------YEPVTALVAED 219 Query: 201 DGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 GLS R I + HL DG E GY+Q V I + + KDY G DRV Sbjct: 220 KGLSDIRQITQQATEHLKPDGYLLFEHGYDQGQAVREILQQTGFEQIETIKDYAGLDRVT 279 Query: 261 L 261 L Sbjct: 280 L 280 >gi|241761552|ref|ZP_04759639.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|241373860|gb|EER63393.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Zymomonas mobilis subsp. mobilis ATCC 10988] Length = 295 Score = 129 bits (325), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 89/276 (32%), Positives = 146/276 (52%), Gaps = 18/276 (6%) Query: 2 QALRDSHSFLCRVTG--------LSSHQVIVDPDSVL-----DDRQRFFLTNAIVRSLKH 48 +ALR++ L V+ L +H + ++ D++L + AI R ++ Sbjct: 25 EALREAARDLATVSMTARLDAELLMAHSLGIERDALLLGSWGEKEAPLSFFEAIKRRKQN 84 Query: 49 ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108 E + ILG+RDF+ +RLT++ D PRP++E L+++A+A+ R + ILDLGTG+ Sbjct: 85 EPVAYILGYRDFWTLRLTVTPDVLIPRPDSETLIETAIAYF--REQAFLPENILDLGTGS 142 Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVI 168 GA+ LA L E KG+GVD S +A++IA+ NA G R + S W ++ FD++ Sbjct: 143 GALLLAALDEWKDAKGLGVDASTEAIKIARLNADKCGALPRVEFKISHWGRGIQQKFDLL 202 Query: 169 VSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228 + NPPYI + + +V ++P ++L G +GL YR I + L + G+ +EIG Sbjct: 203 LCNPPYIARDAM--MPADVLHYEPHLALFSGDEGLDDYREIIPEIPSLLTERGIACLEIG 260 Query: 229 YNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 ++Q +V I + L F D R +L R Sbjct: 261 FDQAENVSMIAKETGL-RSRIFYDLEQRPRCVLLSR 295 >gi|37679116|ref|NP_933725.1| methylase of polypeptide chain release factor [Vibrio vulnificus YJ016] gi|37197858|dbj|BAC93696.1| methylase of polypeptide chain release factor [Vibrio vulnificus YJ016] Length = 291 Score = 129 bits (325), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 89/258 (34%), Positives = 131/258 (50%), Gaps = 9/258 (3%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ LC V + PD +L ++++ + R L E + I+G R+F+++ Sbjct: 29 DAAVLLCHVLDKPRSYLFTWPDKILTEQEQQQFEALVARRLSGEPVAYIIGEREFWSLPF 88 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 ++ T PRP+TE LV+ AL + ILDLGTGTGA+ +AL E P + Sbjct: 89 KVAPSTLIPRPDTERLVELALEKT-----ATQTGSILDLGTGTGAIAIALASELPHRTVM 143 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS-VEGL-FDVIVSNPPYIESVIVDCL 183 GVD+ +A +A+SNA+ + + Q WF V+G F +IVSNPPYI+ Sbjct: 144 GVDLQQEAKLLAESNALALNI-KNVTFKQGSWFEPVVQGTKFALIVSNPPYIDENDPHLN 202 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 +VR F+P+ +L GL+ R IA +L G E GY+Q + V I ++ Sbjct: 203 QGDVR-FEPKSALVAEESGLADIRYIAQQARDYLEPHGWLMFEHGYDQGIAVREILDTLG 261 Query: 244 LFLVNAFKDYGGNDRVLL 261 V KDYGGNDRV L Sbjct: 262 YQEVATEKDYGGNDRVTL 279 >gi|331085531|ref|ZP_08334615.1| protein-(glutamine-N5) methyltransferase [Lachnospiraceae bacterium 9_1_43BFAA] gi|330407418|gb|EGG86920.1| protein-(glutamine-N5) methyltransferase [Lachnospiraceae bacterium 9_1_43BFAA] Length = 277 Score = 129 bits (324), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 83/226 (36%), Positives = 121/226 (53%), Gaps = 10/226 (4%) Query: 35 RFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIE 94 R+F + I R + + I G ++F + ++ PR +TE+LV+ AL+ L E Sbjct: 56 RYF--DCISRRAQRIPLQHITGEQEFMGLPFIVNEHVLIPRQDTEILVEEALS-HLSGNE 112 Query: 95 KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154 + +LD+ TG+G + ++L + VG DIS +AL++AK NA + F L+ Sbjct: 113 Q-----VLDMCTGSGCILISLEHYRKGIRAVGADISDEALQVAKRNAESLNADVTF--LK 165 Query: 155 SDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214 SD F V +D+IVSNPPYI + ++ L EVR DP I+LDG DGL YR I + Sbjct: 166 SDLFEQVAERYDLIVSNPPYIRTKTIEELEEEVRLHDPMIALDGKEDGLYFYRKITEKSR 225 Query: 215 RHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 HL + G EIGY+Q DV ++ E V KD G DRV+ Sbjct: 226 EHLKQGGWLLFEIGYDQGEDVAKMMEKAGFTEVTVKKDLAGLDRVV 271 >gi|209965908|ref|YP_002298823.1| modification methylase,hemK family [Rhodospirillum centenum SW] gi|209959374|gb|ACJ00011.1| modification methylase,hemK family [Rhodospirillum centenum SW] Length = 292 Score = 129 bits (324), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 87/215 (40%), Positives = 120/215 (55%), Gaps = 5/215 (2%) Query: 49 ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108 E + R+LG +F+ + LTL+ DT PRP+TE +V++ L R ++ +R+LDLGTG+ Sbjct: 69 EPLQRLLGSWEFWGLDLTLAPDTLIPRPDTETVVEAVLRR---RPDRTAPLRLLDLGTGS 125 Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFD 166 GA+ LALL E P G+GVD+S A A NA G+S R L W +++ FD Sbjct: 126 GAILLALLSEYPRATGLGVDLSPAAAATAALNARRLGLSGRARFLAGSWAAALGEAARFD 185 Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE 226 V+V NPPYI +D L EV +PR +L GG DGL YR IA + R L GL +E Sbjct: 186 VVVGNPPYIPDDEIDGLEPEVARHEPRRALAGGADGLDCYRAIAAELPRLLLPGGLAVLE 245 Query: 227 IGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 G +Q V + E+ L V +D G DR + Sbjct: 246 HGADQASAVAALLEAAGLGPVGTVRDLAGRDRAAI 280 >gi|90022890|ref|YP_528717.1| protein methyltransferase hemK [Saccharophagus degradans 2-40] gi|89952490|gb|ABD82505.1| modification methylase, HemK family [Saccharophagus degradans 2-40] Length = 288 Score = 129 bits (324), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 89/235 (37%), Positives = 128/235 (54%), Gaps = 9/235 (3%) Query: 31 DDRQRFFLTNAIVRSLKHES-IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL--A 87 D Q+F N +V + + I + G ++F+++ L +S T PR +TE+LV+ AL A Sbjct: 55 DQLQQF---NQLVSQRQQGTPIAYLTGEKEFWSLPLQVSPATLIPRGDTEILVEVALELA 111 Query: 88 FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147 +L + ++ +RILDLGTGTGA+ LAL E P VD +A+E+A+ N G Sbjct: 112 QTLQQKNPQEHIRILDLGTGTGAIALALASELPTANITAVDKMPQAVELAEKNRAALGF- 170 Query: 148 ERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206 + L SDWFS++ F VIVSNPPYI+ +VR F+P +L GL+ Sbjct: 171 KNVTVLHSDWFSAITLQKFHVIVSNPPYIDEQDPHLKQGDVR-FEPLTALVAPNQGLADI 229 Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 + IA+ +HL +G VE G+ Q V +FE V + KD GGNDRV L Sbjct: 230 QHIAEHAKQHLLPNGFLCVEHGWQQAEAVRGVFEKNGYVGVRSEKDNGGNDRVTL 284 >gi|254492179|ref|ZP_05105353.1| methyltransferase, HemK family [Methylophaga thiooxidans DMS010] gi|224462504|gb|EEF78779.1| methyltransferase, HemK family [Methylophaga thiooxydans DMS010] Length = 278 Score = 129 bits (324), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 84/257 (32%), Positives = 130/257 (50%), Gaps = 9/257 (3%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D LC V + ++ V P+ L+ +Q + R + E + + G R F+++ L Sbjct: 25 DVQILLCHVLDCTPTRLHVSPEHELEAQQWQLFNQLVERRKQGEPVAHLTGSRGFWSLDL 84 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 + + T PRP+TELLV AL+ P + ++DLGTGTGA+ L+L E + Sbjct: 85 LVDNSTLIPRPDTELLVSLALSKIKPNM------TVVDLGTGTGAIALSLAAEKADIDVI 138 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLG 184 D S AL++A+ NA + + E+ + W + FD++VSNPPYIE Sbjct: 139 ATDFSFAALQLAQKNANRHAL-EQVRFINMSWLVGFKSASFDLVVSNPPYIEMRDPHLNQ 197 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 +VR F+P +L G DGL R I ++ L KDG VE GY Q V ++F Sbjct: 198 GDVR-FEPLSALVSGPDGLEDIRQIVVQAAKCLKKDGWLLVEHGYQQSAAVQQLFTDAGF 256 Query: 245 FLVNAFKDYGGNDRVLL 261 ++A +D+GG DR ++ Sbjct: 257 EHISAHQDFGGQDRAVM 273 >gi|302875889|ref|YP_003844522.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Clostridium cellulovorans 743B] gi|307689322|ref|ZP_07631768.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Clostridium cellulovorans 743B] gi|302578746|gb|ADL52758.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Clostridium cellulovorans 743B] Length = 283 Score = 129 bits (324), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 87/260 (33%), Positives = 129/260 (49%), Gaps = 7/260 (2%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 D+ L + +I++ +D N I + + ILG F + Sbjct: 24 EDALDLLSNILKKDRLYLIINGLDEVDKESEDIFFNFIEERGRKRPLQYILGNATFMELS 83 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 + PR +TE+LV+ L + I+K + I D+ TGTGA+ +A+ P Sbjct: 84 FKVKEGVLIPRADTEILVEEVLNY----IDKNNYKDICDVCTGTGAIGIAIGYHRPTTTI 139 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL---FDVIVSNPPYIESVIVD 181 DIS A EIAK N V + + +SD S EGL +DVIVSNPPYI + +++ Sbjct: 140 DICDISEIAEEIAKENIFKLKVEKNVEFYRSDLLSFAEGLHKKYDVIVSNPPYIRTSVIE 199 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 L +V++++P ++LDGG DGL YR I + LNK GL + EIGY+Q +V + + Sbjct: 200 ALMEDVKNYEPHLALDGGEDGLIFYRKITKDSCKFLNKGGLLAFEIGYDQGEEVSELLKE 259 Query: 242 RKLFLVNAFKDYGGNDRVLL 261 V KD G NDRV+L Sbjct: 260 YGFIDVIVKKDLGNNDRVVL 279 >gi|259908617|ref|YP_002648973.1| Protein methyltransferase [Erwinia pyrifoliae Ep1/96] gi|224964239|emb|CAX55746.1| Protein methyltransferase [Erwinia pyrifoliae Ep1/96] gi|283478590|emb|CAY74506.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Erwinia pyrifoliae DSM 12163] Length = 281 Score = 129 bits (324), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 92/256 (35%), Positives = 136/256 (53%), Gaps = 8/256 (3%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 RD+ L VTG S +I DS LD L + R E I + G R+F+++ Sbjct: 22 RDAEILLGFVTGKSRAWLIGFDDSELDAAALAQLDALLKRRTAGEPIAYLTGEREFWSLS 81 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L+++ DT PRP++E+LV+ ALA LP ILDLGTG+GA+ LAL E P + Sbjct: 82 LSVTPDTLIPRPDSEVLVEQALAH-LPVAAG----SILDLGTGSGAIALALASERPDCQV 136 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCL 183 +G+D A+ +A+ NA G++ + DWFS++ + F VIVSNPPYI++ Sbjct: 137 IGIDRIPAAVALAQHNAARLGLTNA-TFMPGDWFSALKQQQFAVIVSNPPYIDATDKHLS 195 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 +VR F+P +L G GL+ + IA ++L G +E G+ Q + +I Sbjct: 196 QGDVR-FEPASALVAGDGGLADIKIIAAQAGQYLANGGWLLLEHGWQQGAQIRQILSDHH 254 Query: 244 LFLVNAFKDYGGNDRV 259 + +DYGGNDRV Sbjct: 255 FCQIATCQDYGGNDRV 270 >gi|255319518|ref|ZP_05360732.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Acinetobacter radioresistens SK82] gi|262378459|ref|ZP_06071616.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Acinetobacter radioresistens SH164] gi|255303458|gb|EET82661.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Acinetobacter radioresistens SK82] gi|262299744|gb|EEY87656.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Acinetobacter radioresistens SH164] Length = 274 Score = 129 bits (324), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 82/241 (34%), Positives = 123/241 (51%), Gaps = 17/241 (7%) Query: 27 DSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL 86 D L Q+ A+ R E + ILG + F+ + L ++ DT PRP+TE+LV++ L Sbjct: 41 DKELTAEQQHAYLAALARLEAGEPLAYILGSQPFWTLDLKVTRDTLVPRPDTEVLVETVL 100 Query: 87 AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146 LP + +++DLGTGTGA+ LAL E P++ + D+ L +A+ NA +G+ Sbjct: 101 TLELP-----EETKMVDLGTGTGAIALALASEKPYWSVLATDVYMPTLTVARENADKHGL 155 Query: 147 SERFDTLQSDWFSSV----EGLFDVIVSNPPYIESVIVDCLGLEVRDF--DPRISLDGGI 200 ++ + WF+++ E +FD+IVSNPPYI D ++D +P +L Sbjct: 156 -QQVEFACGAWFAALNQLPEPMFDLIVSNPPYI-----DAEDRHMKDLATEPVRALVALK 209 Query: 201 DGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 GL+ TI + L G +E GY Q V FE + V KDY GNDRV Sbjct: 210 QGLADLETIIEQGKSWLRPKGWIVLEHGYEQAEAVRSFFEHKGFQSVRTVKDYNGNDRVT 269 Query: 261 L 261 L Sbjct: 270 L 270 >gi|15616791|ref|NP_240003.1| HemK protein [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|219681546|ref|YP_002467931.1| HemK protein [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] gi|257471229|ref|ZP_05635228.1| HemK protein [Buchnera aphidicola str. LSR1 (Acyrthosiphon pisum)] gi|11132929|sp|P57269|HEMK_BUCAI RecName: Full=Protein methyltransferase hemK homolog; AltName: Full=M.BusHemKP gi|25403559|pir||A84950 hemK protein [imported] - Buchnera sp. (strain APS) gi|10038854|dbj|BAB12889.1| hemK protein [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|219624389|gb|ACL30544.1| HemK protein [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] Length = 277 Score = 129 bits (324), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 86/256 (33%), Positives = 136/256 (53%), Gaps = 7/256 (2%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 +S L VT + +I + L ++Q +L + I R E I I+ ++F+++ L Sbjct: 23 ESELLLSYVTKHTRSFIISSDEIQLTEKQYKYLNHLIHRRSLGEPIAYIIKEKEFWSLSL 82 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 +S DT PRP+TE+LV+ AL+ +I K + ILDLGTG GA+ LAL + + + Sbjct: 83 CVSYDTLIPRPDTEILVERALS----KI-KSNSACILDLGTGCGAIALALASINSNWNII 137 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185 G+D S AL IA+ NA + SDWF +++ F++IVSNPPY+ + Sbjct: 138 GIDKSENALAIARINASKLNF-KNVTFFFSDWFLNIKKKFNIIVSNPPYVSKKEIKFFKK 196 Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245 ++ F+P +L +GLS I +L G +E G+ QKV V +F+ Sbjct: 197 DIF-FEPLSALISDNNGLSDIENIIKNSKHYLFYGGWLMIEHGWRQKVKVQYLFKKYNFH 255 Query: 246 LVNAFKDYGGNDRVLL 261 + +++DYGGNDRV + Sbjct: 256 EIESYQDYGGNDRVTI 271 >gi|88607095|ref|YP_505733.1| HemK family modification methylase [Anaplasma phagocytophilum HZ] gi|88598158|gb|ABD43628.1| modification methylase, HemK family [Anaplasma phagocytophilum HZ] Length = 282 Score = 129 bits (324), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 75/226 (33%), Positives = 116/226 (51%), Gaps = 5/226 (2%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ V GLS H+V+++PD V+ + I R L + IL R+F+++ Sbjct: 28 DARLIAGHVLGLSEHEVLINPDLVVTAAKTKEFFEVIARRLAGVPVSHILRRREFWSIDF 87 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 + D +PR +TE ++ A+ + + I DLGTGT + +ALL GV Sbjct: 88 AVGPDVLDPRQDTETIISEAIKLH----NRNRRITIADLGTGTACIIIALLSHYKNAVGV 143 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185 + S KA IA N +G++ R ++ W G FD+IVSNPPYI+ + L Sbjct: 144 AFEKSTKAYRIAHQNLQQHGMTGRVRLHRASW-EKCNGKFDLIVSNPPYIKRCKISGLQP 202 Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231 EVR ++P ++LDGG+ G+ Y I + + R L DG +EIG +Q Sbjct: 203 EVRLYEPMVALDGGVRGMEKYLQIFEILRRCLKPDGKAILEIGEDQ 248 >gi|297543675|ref|YP_003675977.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|296841450|gb|ADH59966.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 279 Score = 129 bits (324), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 82/216 (37%), Positives = 120/216 (55%), Gaps = 9/216 (4%) Query: 48 HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTG 107 H I+ + F + + + PRPETE+LV+ +L R+++ DVV LD+GTG Sbjct: 66 HIPYQYIVKKQYFMGLEFFVDENVLIPRPETEILVEE----TLKRLKRGDVV--LDIGTG 119 Query: 108 TGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LF 165 +GA+ +++ K P VDIS KA+EIAK NA GV +R ++SD F ++ F Sbjct: 120 SGAIAVSIAKYFPDCTVYAVDISKKAIEIAKHNAKKQGVLDRIFFIESDLFCNLPPNLKF 179 Query: 166 DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225 D IVSNPPYI+ ++ L EV+ +P ++LDGG DGL Y+ I ++ G Sbjct: 180 DFIVSNPPYIKKREIELLQEEVKK-EPIVALDGGEDGLFFYKKIIREAPFYIKSGGKIGF 238 Query: 226 EIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 EIGY+QK +V + E V KD G DRV++ Sbjct: 239 EIGYSQKEEVTTLLEESGFKDVEIIKDLAGIDRVII 274 >gi|152980147|ref|YP_001351901.1| methylase of polypeptide chain release factors [Janthinobacterium sp. Marseille] gi|151280224|gb|ABR88634.1| methylase of polypeptide chain release factors [Janthinobacterium sp. Marseille] Length = 280 Score = 129 bits (324), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 88/251 (35%), Positives = 131/251 (52%), Gaps = 10/251 (3%) Query: 10 FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69 L VT LS Q+I + L + L+ R L E I + G R+F+ + +S Sbjct: 31 LLGYVTRLSRVQLITQAERALTAEEAQQLSQLFARRLAGEPIAYLTGEREFFGLSFDVSP 90 Query: 70 DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129 PRP+TELLV+ AL + P+ R+LD+GTG+GA+ +A+ P +D+ Sbjct: 91 AVLIPRPDTELLVELALHYLPPQ------GRVLDMGTGSGAIAVAIAHARPDAFVTALDV 144 Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVR 188 S +AL IA+ NA N V F L+SDWFS+V E FD+IVSNPPYI + ++R Sbjct: 145 SAEALAIAEGNARKNQVQVNF--LRSDWFSAVKEQRFDLIVSNPPYIVAGDPHLSEGDLR 202 Query: 189 DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN 248 F+P +L +GLS +TI +R+L +E GY+Q V + + V Sbjct: 203 -FEPVDALTDHANGLSDLQTITRDAARYLAPAAWLLMEHGYDQAAAVRDVLATHGFTEVQ 261 Query: 249 AFKDYGGNDRV 259 +++D G +RV Sbjct: 262 SWRDLAGIERV 272 >gi|209694373|ref|YP_002262301.1| protein methyltransferase HemK [Aliivibrio salmonicida LFI1238] gi|208008324|emb|CAQ78476.1| protein methyltransferase HemK [Aliivibrio salmonicida LFI1238] Length = 288 Score = 129 bits (324), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 86/258 (33%), Positives = 130/258 (50%), Gaps = 9/258 (3%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ LC V ++ P+ ++ + + + + R L E I I+G+R+F+++ L Sbjct: 27 DAAVLLCHVLDKPRSYLLTWPEKLVAETEYNAFESLLSRRLSGEPIAYIIGYREFWSLPL 86 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 +S T PRP+TE LV+ AL P EK +LDLGTGTGA+ LA+ E P + Sbjct: 87 KVSPTTLIPRPDTERLVEVALEHLSPSSEK-----VLDLGTGTGAIALAIASEMPDMCVI 141 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVDCL 183 GVD A+ +AK NA N + + Q WF + + F +IVSNPPYI+ Sbjct: 142 GVDYQYDAVALAKDNAKDNNILNT-EFRQGSWFDPIRMDEQFSIIVSNPPYIDGNDPHLS 200 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 +VR F+P+ +L +G + I + HL ++G +E G+ Q + FE Sbjct: 201 QGDVR-FEPQTALVAEKEGFADLIHIMEHSRTHLVENGWLLMEHGFEQGKQLRDYFEEYG 259 Query: 244 LFLVNAFKDYGGNDRVLL 261 V +DY GNDRV L Sbjct: 260 FINVKTEQDYAGNDRVTL 277 >gi|260767752|ref|ZP_05876687.1| Polypeptide chain release factor methylase [Vibrio furnissii CIP 102972] gi|260617261|gb|EEX42445.1| Polypeptide chain release factor methylase [Vibrio furnissii CIP 102972] Length = 278 Score = 129 bits (323), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 92/264 (34%), Positives = 132/264 (50%), Gaps = 21/264 (7%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ LC ++ PD +LDD + R L E + I+G R+F+++ L Sbjct: 14 DAAVLLCHALDKPRSYLLTWPDKILDDTTHAAFDALLARRLTGEPVAYIIGEREFWSLPL 73 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV--RILDLGTGTGAVCLALLKESPFFK 123 +S T PRP+TE LV+ AL EK + ILDLGTGTGA+ LAL E P + Sbjct: 74 KVSPSTLIPRPDTERLVEVAL-------EKAQTLDGDILDLGTGTGAIALALASELPQRR 126 Query: 124 GVGVDISCKALEIAKSNA----VTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIES 177 VG+D+ +A ++A NA +TN LQ WF + F +IVSNPPYIE Sbjct: 127 VVGIDLRDEAQQLASDNANRLHLTN-----VTFLQGSWFEPLSHGTKFALIVSNPPYIEE 181 Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237 +VR F+P+ +L +GL+ + I+D +L G + E GY+Q V Sbjct: 182 NDPHLAQGDVR-FEPKSALVAADNGLADIKYISDAGRDYLQSGGWLAFEHGYDQGASVRT 240 Query: 238 IFESRKLFLVNAFKDYGGNDRVLL 261 I ++ V +DY G+DRV L Sbjct: 241 IMQALGYQHVITEQDYAGHDRVTL 264 >gi|51474015|ref|YP_067772.1| bifunctional N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase/tRNA (m7G46) methyltransferase [Rickettsia typhi str. Wilmington] gi|81389917|sp|Q68VR6|HEMK_RICTY RecName: Full=Bifunctional methyltransferase; Includes: RecName: Full=HemK protein homolog; Includes: RecName: Full=tRNA (guanine-N(7)-)-methyltransferase; AltName: Full=tRNA(m7G46)-methyltransferase gi|51460327|gb|AAU04290.1| bifunctional methyltransferase [Rickettsia typhi str. Wilmington] Length = 518 Score = 129 bits (323), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 78/266 (29%), Positives = 137/266 (51%), Gaps = 15/266 (5%) Query: 10 FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69 L VT +++ + L + + + R L+HE I I G ++FY+ ++ Sbjct: 31 LLQHVTNKPIEHLLIKLNEQLSEAEIEAFEKLLERRLEHEPIAYITGIKEFYSREFIVNK 90 Query: 70 DTFEPRPETELLVDSALAFSLPR--------IEKRDVVR------ILDLGTGTGAVCLAL 115 PR +TE+L+D + + R ++ D V+ IL+LGTG+G + ++L Sbjct: 91 HVLIPRIDTEILIDVVIGLVVSRNDLNTCSKLKSLDSVKTIQHYNILELGTGSGCIAISL 150 Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPY 174 L E P + DIS A+++AKSN + + V++R + S+WF + + FD+IVSNPPY Sbjct: 151 LCELPNTSVIATDISVDAIKVAKSNTIKHNVTDRIQIIHSNWFEKLNKQKFDLIVSNPPY 210 Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234 I + +E +++P I+L DGL Y IA + L +G +EIG++Q Sbjct: 211 ISHSEKLEMAIETINYEPHIALFAEEDGLEAYSIIAKNAKQFLKPNGKIILEIGFSQAEK 270 Query: 235 VVRIFESRKLFLVNAFKDYGGNDRVL 260 V +IF + + + ++D ++RV+ Sbjct: 271 VCQIFLNYGYNIDHIYQDLQSHNRVI 296 >gi|194364468|ref|YP_002027078.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Stenotrophomonas maltophilia R551-3] gi|194347272|gb|ACF50395.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Stenotrophomonas maltophilia R551-3] Length = 285 Score = 129 bits (323), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 88/261 (33%), Positives = 129/261 (49%), Gaps = 16/261 (6%) Query: 8 HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67 H C + L +H DP LD + + R + E + + G R F+ + L + Sbjct: 35 HVLDCPRSWLFAH--ATDP---LDANDQAAFEALLARRVAGEPVAYLTGRRGFWTLDLEV 89 Query: 68 SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 T PRPETELLV+ +L R+ + +++ DLGTG+GA+ LAL E P + + Sbjct: 90 DPATLIPRPETELLVE----LALERLPQDRALQLADLGTGSGAIALALASERPQAQVLAT 145 Query: 128 DISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGL 185 D S AL +A NA + + RF DW++ ++G FD+I SNPPYI S D L Sbjct: 146 DASPGALTVAARNAARHELGNVRFAEGGHDWYAPLQGARFDLIASNPPYIAS---DDPHL 202 Query: 186 EVRD--FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 E D F+P +L G+DGL R I DG HL G +E G++Q + +F++ Sbjct: 203 EQGDLRFEPATALASGVDGLDDIRRIVDGGQAHLLPGGWLLIEHGWDQGAAIRALFDAAG 262 Query: 244 LFLVNAFKDYGGNDRVLLFCR 264 V +D DR+ L R Sbjct: 263 FAEVQTVQDLEQRDRITLGRR 283 >gi|223932123|ref|ZP_03624127.1| modification methylase, HemK family [Streptococcus suis 89/1591] gi|302023744|ref|ZP_07248955.1| methyltransferase [Streptococcus suis 05HAS68] gi|330832777|ref|YP_004401602.1| modification methylase, HemK family [Streptococcus suis ST3] gi|223899104|gb|EEF65461.1| modification methylase, HemK family [Streptococcus suis 89/1591] gi|329307000|gb|AEB81416.1| modification methylase, HemK family [Streptococcus suis ST3] Length = 277 Score = 129 bits (323), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 85/227 (37%), Positives = 122/227 (53%), Gaps = 15/227 (6%) Query: 40 NAIVRSL-KHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV 98 +AI + L +H I+G DF+ + + PRPETE LV+ L + Sbjct: 56 DAIFQQLSQHRPAQYIIGKADFHGLEFAVDERVLIPRPETEELVNLIL-----QENSGAG 110 Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 +RILD+GTG+GA+ ++L K ++ V VDIS AL +A+ NA TN VS F L+SD F Sbjct: 111 LRILDIGTGSGAIAISLAKARSDWEVVAVDISKDALAVAQENARTNQVSVHF--LESDVF 168 Query: 159 SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 +V G FD+IVSNPPYI D +GL V +P ++L DG++ YR IA+ L Sbjct: 169 QAVTGQFDLIVSNPPYISPDDTDEVGLNVLASEPHLALFAEEDGMAIYRQIAEQAGAFLK 228 Query: 219 KDGLCSVEIGYNQKVDVVRI----FESRKLFLVNAFKDYGGNDRVLL 261 + G EIGY Q D+ + F ++ + KD G DR ++ Sbjct: 229 EKGKLYFEIGYKQGQDLTDLLALHFPKKR---IRVLKDQFGQDRKVI 272 >gi|269102027|ref|ZP_06154724.1| Polypeptide chain release factor methylase [Photobacterium damselae subsp. damselae CIP 102761] gi|268161925|gb|EEZ40421.1| Polypeptide chain release factor methylase [Photobacterium damselae subsp. damselae CIP 102761] Length = 282 Score = 129 bits (323), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 84/260 (32%), Positives = 133/260 (51%), Gaps = 9/260 (3%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ LC ++ P+ LD+ Q ++ + R L E + I+G R+F+++ L Sbjct: 27 DAAVLLCHALDKPRSYLLTWPEKELDESQFSLFSHCVSRRLAGEPVAYIIGVREFWSLPL 86 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 ++ T PRP+TE LV+ +L +I + ++LDLGTGTGA+ LA+ E P Sbjct: 87 KVAPSTLIPRPDTERLVE----LALDKIPAQP-CQVLDLGTGTGAIALAIASERPDITVT 141 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL--FDVIVSNPPYIESVIVDCL 183 G+D+ +A ++A N T G + L W+S + + F VIVSNPPYI+ Sbjct: 142 GIDLRQEAAQLATENGATLGFN-NVQFLAGSWYSPLAEIQQFAVIVSNPPYIDEQDPHLD 200 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 +VR F+P+ +L +GL+ + IA+ +HL +G +E G+ Q + V I Sbjct: 201 QGDVR-FEPKSALVAADNGLADIKIIAEQGRQHLQTNGWLLLEHGFEQGLAVREILTKLG 259 Query: 244 LFLVNAFKDYGGNDRVLLFC 263 V +DY G DRV L C Sbjct: 260 YQAVVTEQDYAGLDRVTLGC 279 >gi|327462228|gb|EGF08555.1| protein-(glutamine-N5) methyltransferase [Streptococcus sanguinis SK1] gi|327489583|gb|EGF21375.1| protein-(glutamine-N5) methyltransferase [Streptococcus sanguinis SK1058] Length = 276 Score = 129 bits (323), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 86/235 (36%), Positives = 124/235 (52%), Gaps = 16/235 (6%) Query: 30 LDDRQRFFLTNAIVRSL-KHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAF 88 L+DR++ AI L H+ I+G DF+ + L + PRPETE LV+ L+ Sbjct: 49 LEDREQL---KAIQEQLLAHKPAQYIIGSSDFHGLTLKVDERVLIPRPETEELVELILSE 105 Query: 89 SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148 + + + ILD+GTG+GA+ L L P ++ D+S AL +A NA + G+S Sbjct: 106 N-----RESSLSILDIGTGSGAIALTLANSRPDWQITASDLSGDALSLATENAQSCGLSL 160 Query: 149 RFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208 F +QSD F ++ G FD+IVSNPPYI D +GL V +P ++L DG + YR Sbjct: 161 TF--IQSDCFEAISGNFDIIVSNPPYISEADKDEVGLNVLTSEPHMALFAEEDGYAVYRK 218 Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF---LVNAFKDYGGNDRVL 260 IA+ HL K G +EIGY Q V + +K F + KD G DR++ Sbjct: 219 IAEQAGDHLTKKGKIYLEIGYKQGDGVRELL--KKSFPQKRIRVLKDRFGKDRMV 271 >gi|297539751|ref|YP_003675520.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Methylotenera sp. 301] gi|297259098|gb|ADI30943.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Methylotenera sp. 301] Length = 320 Score = 129 bits (323), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 91/248 (36%), Positives = 121/248 (48%), Gaps = 33/248 (13%) Query: 44 RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIE--------- 94 R L E + ILG R+FY + L ++ DT PRP+TE LV++ALA +P E Sbjct: 64 RRLAGEPMAYILGNREFYGLDLLVTPDTLIPRPDTETLVEAALA-KIPLSESTKNLSFRR 122 Query: 95 --------------------KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134 + D +++LDLGTGTGA+ LA+ K P VD S AL Sbjct: 123 KSESSGVEQHDYETLDSDFRRNDDLKVLDLGTGTGAIALAIAKNRPKASITAVDASDAAL 182 Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPR 193 EIAK N+ + TL S+WF ++ FDVIVSNPPYIE ++R F+P Sbjct: 183 EIAKQNSQQLSIINVEFTL-SNWFENLSNQRFDVIVSNPPYIEEHDAHLTQGDLR-FEPL 240 Query: 194 ISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDY 253 +L G+DGL R I +L G +E GYNQ V + L + KD Sbjct: 241 SALASGMDGLDDIRQIIGDCLIYLKPQGWLMLEHGYNQAEQVADLMADAGLTNIETIKDL 300 Query: 254 GGNDRVLL 261 G NDRV + Sbjct: 301 GNNDRVTI 308 >gi|329121080|ref|ZP_08249711.1| protein-(glutamine-N5) methyltransferase [Dialister micraerophilus DSM 19965] gi|327471242|gb|EGF16696.1| protein-(glutamine-N5) methyltransferase [Dialister micraerophilus DSM 19965] Length = 288 Score = 129 bits (323), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 78/219 (35%), Positives = 124/219 (56%), Gaps = 10/219 (4%) Query: 50 SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGT 108 S+ ++G +DF + ++ PRP+TE V+ + +I K D+ + + D+G G+ Sbjct: 75 SVATLIGEKDFMGFKFFVNDKVLIPRPDTETWVEKVI-----QIHKNDIELFVADIGCGS 129 Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFD 166 GA+ + LK KGVG+DIS A+EI+K N + R + + D+F++++ FD Sbjct: 130 GAIICSFLKYCKNAKGVGIDISDDAIEISKKNIKNLSLENRIELRKGDFFNALKKGEKFD 189 Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE 226 I SNPPYI + ++ L EV++ +P I+LDGG DGL+ YR IA+ + LN G +VE Sbjct: 190 GIFSNPPYIPTDDIEFLQKEVKN-EPLIALDGGKDGLNFYRKIAENAEKFLNSGGFLAVE 248 Query: 227 IGYNQKVDVVRIFESRKLFL-VNAFKDYGGNDRVLLFCR 264 +G +Q + V +FES F KDYG +R + R Sbjct: 249 VGIHQSLIVKEMFESTGYFTDFEIIKDYGNIERAVYCIR 287 >gi|307731137|ref|YP_003908361.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Burkholderia sp. CCGE1003] gi|307585672|gb|ADN59070.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Burkholderia sp. CCGE1003] Length = 289 Score = 129 bits (323), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 87/262 (33%), Positives = 136/262 (51%), Gaps = 15/262 (5%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDR--QRFFLTNAIVRSLKHESIHRILGWRDFYNV 63 ++ L V G Q+I D L+ +R+ A R + E + +++G R+F+ + Sbjct: 28 EARILLTHVLGWRQTQLITRADEALESACVERYLALQA--RRVAGEPVAQLVGVREFFGL 85 Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 ++ PRPETELLV++ALA +E R+LDLGTGTGA+ +A+ P + Sbjct: 86 EFEVTPHVLIPRPETELLVETALAA----MENLARPRVLDLGTGTGAIAVAIAAMRPDAQ 141 Query: 124 GVGVDISCKALEIAKSNAVTNGVSER----FDTLQSDWFSSVEGL--FDVIVSNPPYIES 177 +D S +AL++A+ NA ++R +QSDW+ S+E FDVIVSNPPYI S Sbjct: 142 VSALDRSTEALKVAERNAARLLDAKRPGGAVTFMQSDWYGSLESTLRFDVIVSNPPYIAS 201 Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237 ++R ++PR +L DGLS R I G L G+ +E GY+Q V Sbjct: 202 GDPHLTQGDLR-YEPRGALTDEADGLSAIRKIVAGAPARLAPQGVLWMEHGYDQAQAVRA 260 Query: 238 IFESRKLFLVNAFKDYGGNDRV 259 + ++ V + +D G +R+ Sbjct: 261 LLTAQGFADVRSERDLAGIERI 282 >gi|238927405|ref|ZP_04659165.1| polypeptide chain release factor methyltransferase HemK [Selenomonas flueggei ATCC 43531] gi|238884687|gb|EEQ48325.1| polypeptide chain release factor methyltransferase HemK [Selenomonas flueggei ATCC 43531] Length = 292 Score = 129 bits (323), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 78/221 (35%), Positives = 123/221 (55%), Gaps = 9/221 (4%) Query: 47 KHESIHRILGWRDFYNVRLTLSSDTFEPRPETELL----VDSALAFSLPRIEKRDVVRIL 102 +H I ILG R+F + ++ DT PRP+TE+L VD+ A + +E+ +R Sbjct: 71 RHVPIAYILGRREFMGLPFRVTRDTLIPRPDTEILAQFAVDTLRARASAGMEE---LRFA 127 Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162 D+GTGTGA+ L++L + + VDIS +A + NA+ G+ R + L D + Sbjct: 128 DIGTGTGAIALSVLNYTEGTRADAVDISPEAAAVTAENAMALGLMSRIEILIGDLAVPLL 187 Query: 163 GL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221 G +D+I+SNPPYI + VD L EVR +P ++LDGG DGLS YR + L + G Sbjct: 188 GRSYDMILSNPPYIPTAEVDTLMEEVRSHEPHLALDGGADGLSVYRQLMADAPDLLKEGG 247 Query: 222 LCSVEIGYNQKVDVVRIFESRKLFLVNAF-KDYGGNDRVLL 261 + +VE+G ++ DV + + + A +D G +RV++ Sbjct: 248 IIAVEVGIHEAADVASLMAAHPRIVRTAMRRDLAGIERVVI 288 >gi|169335809|ref|ZP_02863002.1| hypothetical protein ANASTE_02235 [Anaerofustis stercorihominis DSM 17244] gi|169258547|gb|EDS72513.1| hypothetical protein ANASTE_02235 [Anaerofustis stercorihominis DSM 17244] Length = 279 Score = 129 bits (323), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 78/239 (32%), Positives = 123/239 (51%), Gaps = 5/239 (2%) Query: 23 IVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLV 82 I D + L D + + + H I G ++F + + +T PRPETE++V Sbjct: 42 ITDLNYELTDEEINEYEQLVNKRCAHVPFGYITGIKEFMGLDFHVDRETLIPRPETEIIV 101 Query: 83 DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142 + + K + IL++G G+G + ++ K +GVDI+ KAL IA N Sbjct: 102 EYMIEHF-----KGITLDILEIGVGSGCISISTAKYLENVNILGVDINEKALSIANKNIE 156 Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202 + V +R ++SD + +VEG FDVI+SNPPYI I++ L +V+ ++P ++LDGG DG Sbjct: 157 YHNVDDRVKFIRSDIYENVEGKFDVIISNPPYIRKDIIETLEDDVKKYEPILALDGGEDG 216 Query: 203 LSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 L YR I S++LN+ G EIGY+Q V + + D G DR ++ Sbjct: 217 LYFYREIIKNASKYLNESGHIIFEIGYDQGEQVKDLLIQNNFTNIEIINDLAGFDRTVV 275 >gi|315179417|gb|ADT86331.1| hemK protein [Vibrio furnissii NCTC 11218] Length = 278 Score = 129 bits (323), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 92/264 (34%), Positives = 132/264 (50%), Gaps = 21/264 (7%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ LC ++ PD +LDD + R L E + I+G R+F+++ L Sbjct: 14 DAAVLLCHALDKPRSYLLTWPDKLLDDTTHAAFDALLARRLTGEPVAYIIGEREFWSLPL 73 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR--ILDLGTGTGAVCLALLKESPFFK 123 +S T PRP+TE LV+ AL EK + ILDLGTGTGA+ LAL E P + Sbjct: 74 KVSPSTLIPRPDTERLVEVAL-------EKAQTLTGDILDLGTGTGAIALALASELPQRR 126 Query: 124 GVGVDISCKALEIAKSNA----VTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIES 177 VG+D+ +A ++A NA +TN LQ WF + F +IVSNPPYIE Sbjct: 127 VVGIDLRDEAQQLASDNANRLHLTN-----VTFLQGSWFEPLSHGTKFALIVSNPPYIEE 181 Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237 +VR F+P+ +L +GL+ + I+D +L G + E GY+Q V Sbjct: 182 NDPHLAQGDVR-FEPKSALVAADNGLADIKHISDAGRDYLQSGGWLAFEHGYDQGASVRT 240 Query: 238 IFESRKLFLVNAFKDYGGNDRVLL 261 I ++ V +DY G+DRV L Sbjct: 241 IMQALGYQHVITEQDYAGHDRVTL 264 >gi|167041274|gb|ABZ06030.1| putative CheR methyltransferase, SAM binding domain protein [uncultured marine microorganism HF4000_005D21] gi|167045779|gb|ABZ10425.1| putative methyltransferase small domain protein [uncultured marine bacterium HF4000_APKG3108] Length = 279 Score = 129 bits (323), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 74/226 (32%), Positives = 126/226 (55%), Gaps = 9/226 (3%) Query: 38 LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97 +AI R + E + I+G ++F++ ++ T PRPETELL+ + F K Sbjct: 57 FNHAIQRRINREPVAYIIGKKEFWSQDFAVNQATLVPRPETELLIYKVVDFF-----KNK 111 Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV--SERFDTLQS 155 + +LD+GTG+G + L++LKE +GVG+DIS KA++ A+ N+ + +F Sbjct: 112 RINVLDIGTGSGCILLSILKELDLSRGVGIDISTKAIKTAQINSKNLNLFHQSKFKVFDI 171 Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215 F+ G +D+IVSNPPYI S + L ++ +++P ++L+GG+DGL R + + Sbjct: 172 SKFNV--GKYDLIVSNPPYIPSKDIKNLSKDIINYEPLVALNGGLDGLDLIRKVIYKSNS 229 Query: 216 HLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 L K+GL ++EIG+NQ + V + ++ DY N R ++ Sbjct: 230 LLKKNGLLAIEIGFNQYLKVSSLLRQYGFREMSRQCDYNHNVRCII 275 >gi|254000221|ref|YP_003052284.1| HemK family modification methylase [Methylovorus sp. SIP3-4] gi|253986900|gb|ACT51757.1| modification methylase, HemK family [Methylovorus sp. SIP3-4] Length = 297 Score = 129 bits (323), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 88/232 (37%), Positives = 116/232 (50%), Gaps = 21/232 (9%) Query: 44 RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103 R L E I ILG R+F+ +RL +S T PRP+TE LV++ALA RI D +LD Sbjct: 68 RRLAGEPIAYILGNREFFGLRLAVSPATLIPRPDTETLVEAALA----RIPSEDTREVLD 123 Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV----------TNGVSE-RFDT 152 LGTGTGA+ LA+ P + +GVD S AL++A+ NA T+G+++ + Sbjct: 124 LGTGTGAIALAIAAHRPKSRVIGVDASAAALQVARQNAEALGLAITEPDTHGITKGNVEF 183 Query: 153 LQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDF--DPRISLDGGIDGLSHYRTI 209 WF+ + GL FDVIVSNPPYI D L+ D +P +L G DGL R I Sbjct: 184 RLGSWFTPLAGLKFDVIVSNPPYIRK---DDPHLQQGDLRHEPFSALASGADGLDDIRII 240 Query: 210 ADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 H G +E GY+Q V + V D G RV L Sbjct: 241 VQHAPAHFQPSGWLLLEHGYDQADAVATLMRDTGFSDVQHAHDLAGIARVTL 292 >gi|242239291|ref|YP_002987472.1| modification methylase, HemK family [Dickeya dadantii Ech703] gi|242131348|gb|ACS85650.1| modification methylase, HemK family [Dickeya dadantii Ech703] Length = 279 Score = 129 bits (323), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 96/260 (36%), Positives = 135/260 (51%), Gaps = 12/260 (4%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 RD+ L VTG +I +++L D Q+ L + R E I + G ++F+++ Sbjct: 22 RDAEILLGHVTGKRRTFLIAFGETLLSDDQQQMLEGLLTRRSAGEPIAYLTGEKEFWSLA 81 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L +S T PRP+TE LV+ AL P+ + +LDLGTGTGA+ LA+ E P Sbjct: 82 LEVSPATLIPRPDTECLVEQALQRLPPQ-----ALSVLDLGTGTGAIALAIASERPACDV 136 Query: 125 VGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDC 182 +GVD A+ +A NA G+ RF L DWFSS+ E F +IVSNPPYI++ Sbjct: 137 LGVDCQPDAVTLATHNARRLGIHNVRF--LLGDWFSSLNEQRFSMIVSNPPYIDAADPHL 194 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD-GLCSVEIGYNQKVDVVRIFES 241 +VR ++P +L G GL+ R I SRH D G +E G+ Q V +F Sbjct: 195 NCGDVR-YEPASALVAGEHGLADLRHIVQ-YSRHFLLDGGWLLLEHGWLQGESVRELFWQ 252 Query: 242 RKLFLVNAFKDYGGNDRVLL 261 V +DYGGN+RV L Sbjct: 253 YGFSQVETCRDYGGNERVSL 272 >gi|119472533|ref|ZP_01614581.1| N5-glutamine methyltransferase, modifies release factors RF-1 and RF-2 [Alteromonadales bacterium TW-7] gi|119444857|gb|EAW26157.1| N5-glutamine methyltransferase, modifies release factors RF-1 and RF-2 [Alteromonadales bacterium TW-7] Length = 279 Score = 129 bits (323), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 86/257 (33%), Positives = 127/257 (49%), Gaps = 8/257 (3%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L V + P+ +L Q+ R L E + I G R+F+++ L Sbjct: 26 DAQVLLLHVLDKPRSYLFTWPERLLSTEQQHSFDTLCARRLSGEPVAHITGQREFWSLTL 85 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 +++ T PRP+TE LV++AL + + ++LDLGTGTGA+ LAL E P + Sbjct: 86 EVNATTLIPRPDTETLVEAALGLGI-----SENAKVLDLGTGTGAIALALGSEMPLWNIT 140 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLG 184 VD A+ +A N G+S QS+WFSS++ FD+IV+NPPYIES Sbjct: 141 AVDKVTDAVTLATRNQQRLGLS-NVRVKQSNWFSSLDNEYFDLIVTNPPYIESSDEHLAQ 199 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 +VR F+P +L G+S + I +L G +E GY+Q V F++ Sbjct: 200 GDVR-FEPLSALVAEDSGMSDIKQIITHSRDYLLSSGYLLIEHGYDQGFAVREFFKTMAF 258 Query: 245 FLVNAFKDYGGNDRVLL 261 + KD G NDRV L Sbjct: 259 VNIKTIKDLGENDRVTL 275 >gi|226315062|ref|YP_002774958.1| hypothetical protein BBR47_54770 [Brevibacillus brevis NBRC 100599] gi|226098012|dbj|BAH46454.1| conserved hypothetical protein [Brevibacillus brevis NBRC 100599] Length = 296 Score = 128 bits (322), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 83/243 (34%), Positives = 126/243 (51%), Gaps = 7/243 (2%) Query: 26 PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85 PDS+ D L VR +E + + G ++FY T+ PRPETE+LV+ Sbjct: 56 PDSI-DAETLVKLDGLCVRRANNEPLQYMFGEQEFYGRPFTVRPGVLIPRPETEILVEQV 114 Query: 86 LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145 +A + + + + ++D+GTG+GA+C+ L E P ++ VD+S +A IA+ NA G Sbjct: 115 MAAATMLWPESEELAVVDIGTGSGAICITLALEKPQWRVTTVDLSLEATAIARENASRLG 174 Query: 146 VSERFDTLQSDWFSSVEGL---FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202 RF LQ D + DV+VSNPPYI S V+ L EVR +PR++LDGG DG Sbjct: 175 ADVRF--LQGDLVQPLLEAGEKVDVLVSNPPYIPSRDVEELDDEVRVHEPRLALDGGEDG 232 Query: 203 LSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF-LVNAFKDYGGNDRVLL 261 L YR + + + L + + E+G Q DV + + + V D G +RV++ Sbjct: 233 LDCYRRLCEALPNLLKDRAVVAFEVGIYQARDVAALMRASGVMDEVEIVPDLAGIERVVI 292 Query: 262 FCR 264 R Sbjct: 293 GVR 295 >gi|328952116|ref|YP_004369450.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Desulfobacca acetoxidans DSM 11109] gi|328452440|gb|AEB08269.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Desulfobacca acetoxidans DSM 11109] Length = 296 Score = 128 bits (322), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 71/215 (33%), Positives = 118/215 (54%), Gaps = 2/215 (0%) Query: 27 DSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL 86 D L + + + R L HE I G ++F+++ ++ PRPETELLV+ A Sbjct: 54 DQPLGENELSCYKKLLKRRLAHEPTQYITGRQEFWSLDFLVTPAVLIPRPETELLVEVAA 113 Query: 87 AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146 A+ + + VR++D+GTG+G + + L KE P + +D S +AL +A+ NA +GV Sbjct: 114 AYLQGQRAEETSVRLIDVGTGSGVLAVVLAKEHPQAQVTALDQSWEALCLARQNARRHGV 173 Query: 147 SERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204 ER + D +++ E FD+IVSN PY+ + L +++D++PR++LDGG DGL Sbjct: 174 EERIRFIMGDLLAALRPEAQFDLIVSNAPYVPTAEWLRLPSDIKDYEPRLALDGGGDGLD 233 Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 R + +L GL ++E+G Q V ++ Sbjct: 234 VIRRLVQAAPGYLKAGGLLALEVGQGQSAAVEQLL 268 >gi|329296265|ref|ZP_08253601.1| release factor-specific protein-(glutamine-N5) methyltransferase [Plautia stali symbiont] Length = 276 Score = 128 bits (322), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 96/259 (37%), Positives = 134/259 (51%), Gaps = 10/259 (3%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 RD+ L VTG S +I DS L+D Q L + R ++ E I ++G R+F+++ Sbjct: 22 RDAEILLGFVTGKSRSGLIAFDDSPLNDAQLAQLETLLARRVRGEPIAHLVGEREFWSLP 81 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L +S T PRP+TE+LV+ AL LP +LDLGTGTGA+ LAL E P + Sbjct: 82 LRVSDATLIPRPDTEVLVEQAL-LRLPATPS----AVLDLGTGTGAIALALASERPDCQI 136 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCL 183 G D A+ +A+ NA ++ L S WF + FD+IVSNPPYI++ Sbjct: 137 TGCDRIAAAVALAQDNAQRLHLTNAGFVL-SHWFDDLPAQRFDLIVSNPPYIDAADEHLQ 195 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 +VR F+P +L GL+ R I + L G +E G+ Q + VR +R Sbjct: 196 QGDVR-FEPLSALVAEEAGLADLRLIIERAPHWLQPQGWLLLEHGWQQG-EAVRTLLTRN 253 Query: 244 LFL-VNAFKDYGGNDRVLL 261 FL V +DYGGN RV L Sbjct: 254 GFLAVTTVEDYGGNPRVTL 272 >gi|313202187|ref|YP_004040845.1| HemK family modification methylase [Methylovorus sp. MP688] gi|312441503|gb|ADQ85609.1| modification methylase, HemK family [Methylovorus sp. MP688] Length = 297 Score = 128 bits (322), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 88/232 (37%), Positives = 120/232 (51%), Gaps = 21/232 (9%) Query: 44 RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103 R L E + ILG R+F+ +RL +S T PRP+TE LV++ALA +P E R ++LD Sbjct: 68 RRLAGEPVAYILGNREFFGLRLAVSPATLIPRPDTETLVEAALAH-IPSEETR---QVLD 123 Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER----FDTLQSD--- 156 LGTGTGA+ LA+ P + + VD S AL++A+ NA G++ DT + + Sbjct: 124 LGTGTGAIALAIAAHRPQSRVIAVDASAAALQVARHNAEALGLATPEAGDQDTTKGNVEF 183 Query: 157 ----WFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDF--DPRISLDGGIDGLSHYRTI 209 WF+ + GL FDVIVSNPPYI D L+ D +P +L G+DGL R I Sbjct: 184 RLGSWFTPLAGLKFDVIVSNPPYIRK---DDPHLQQGDLRHEPLSALASGVDGLDDIRII 240 Query: 210 ADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 HL G +E GY+Q V + + V D G RV L Sbjct: 241 VQHAPAHLQPSGWLLLEHGYDQADAVATLMRNTGFSDVQHAHDLAGIARVTL 292 >gi|291527967|emb|CBK93553.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Eubacterium rectale M104/1] Length = 283 Score = 128 bits (322), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 79/210 (37%), Positives = 116/210 (55%), Gaps = 8/210 (3%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110 + I+G ++F ++ ++S+ PR +TE LV+ AL P + R+LD+ TG+G Sbjct: 70 LQYIVGEQEFMGLKFRVNSNVLIPRQDTETLVEEALKVIEPGM------RVLDMCTGSGC 123 Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170 + +++LK + G DIS +AL +AK NA NGV F+ +SD F V+ ++DVIVS Sbjct: 124 IIISILKNTTNVDGAACDISKQALNVAKENARLNGVFVDFE--RSDLFEHVDEMYDVIVS 181 Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230 NPPYI S + L EV F+P +LDG DGL YR I +L G EIG + Sbjct: 182 NPPYIRSDEIPHLMPEVSVFEPHEALDGSEDGLLFYRRIIKDCRANLKPHGRLLFEIGCD 241 Query: 231 QKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 Q V ++ + V+ KD GNDRV+ Sbjct: 242 QGRQVSQMMQFAGFSDVHVIKDLAGNDRVV 271 >gi|187925495|ref|YP_001897137.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Burkholderia phytofirmans PsJN] gi|187716689|gb|ACD17913.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Burkholderia phytofirmans PsJN] Length = 286 Score = 128 bits (322), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 89/262 (33%), Positives = 135/262 (51%), Gaps = 15/262 (5%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDR--QRFFLTNAIVRSLKHESIHRILGWRDFYNV 63 ++ L V G Q+I D LD + +R+ A R + E + +++G R+F+ + Sbjct: 25 EARILLTHVLGWRPTQLITRSDEALDGKLVERYQTLEA--RRVAGEPVAQLVGAREFFGL 82 Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 ++ PRPETELLVD+AL+ +E R+LDLGTGTGA+ +A+ P + Sbjct: 83 DFEVTPHVLIPRPETELLVDTALSA----LENLVRPRVLDLGTGTGAIAVAIASMRPDAR 138 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDT----LQSDWFSSVEGL--FDVIVSNPPYIES 177 +D S +AL +A NA ++R QSDW+ S++ FDVIVSNPPYI S Sbjct: 139 VWALDRSAEALAVATRNAARLLDAQRPGGAVVLTQSDWYDSLDAALRFDVIVSNPPYIAS 198 Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237 ++R F+PR +L DGLS R I G L DG+ +E GY+Q V Sbjct: 199 GDPHLYEGDLR-FEPRGALTDEADGLSAIRAIIAGAPTRLAADGVLWIEHGYDQAEAVRA 257 Query: 238 IFESRKLFLVNAFKDYGGNDRV 259 + ++ V + +D G +R+ Sbjct: 258 LLTAQGFAQVRSERDLAGIERI 279 >gi|156933677|ref|YP_001437593.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Cronobacter sakazakii ATCC BAA-894] gi|156531931|gb|ABU76757.1| hypothetical protein ESA_01499 [Cronobacter sakazakii ATCC BAA-894] Length = 285 Score = 128 bits (322), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 90/258 (34%), Positives = 134/258 (51%), Gaps = 8/258 (3%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 RD+ L VTG + ++ ++ L D + L + R E + ++G R+F+++ Sbjct: 22 RDAEILLAFVTGRTRTFILAFGETALTDDEHERLDALLARRAAGEPVAYLIGQREFWSLP 81 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L +S T PRP+TE LV+ ALA LP ILDLGTGTGA+ LAL E P Sbjct: 82 LEVSPATLIPRPDTECLVEQALA-RLPATP----CCILDLGTGTGAIALALASERPDCHV 136 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCL 183 +D+ +A+ +AK NA G+ + LQS WFS++ + F +IVSNPPYI+ Sbjct: 137 TALDVIPEAVALAKRNAQRLGI-DNVTILQSHWFSALTDVRFSLIVSNPPYIDGDDPHLS 195 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 +VR F+P+ +L GL+ T+ R L +G +E G+ Q V +F Sbjct: 196 QGDVR-FEPKSALVADDAGLADLETLVTEARRFLEDNGWLMLEHGWQQGEAVRELFTRAG 254 Query: 244 LFLVNAFKDYGGNDRVLL 261 V +DYGGN+R+ L Sbjct: 255 YQAVETCRDYGGNERLTL 272 >gi|291524541|emb|CBK90128.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Eubacterium rectale DSM 17629] Length = 283 Score = 128 bits (322), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 79/210 (37%), Positives = 115/210 (54%), Gaps = 8/210 (3%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110 + I+G ++F ++ ++S+ PR +TE LV+ AL P + R+LD+ TG+G Sbjct: 70 LQYIVGEQEFMGLKFRVNSNVLIPRQDTETLVEEALKVIEPGM------RVLDMCTGSGC 123 Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170 + +++LK + G DIS +AL +AK NA NGV F+ +SD F V+ ++DVIVS Sbjct: 124 IIISILKNTTNVDGAACDISKQALNVAKENARLNGVFVDFE--RSDLFEHVDEMYDVIVS 181 Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230 NPPYI S + L EV F+P +LDG DGL YR I +L G EIG + Sbjct: 182 NPPYIRSDEIPHLMPEVSVFEPHEALDGSEDGLLFYRRIIKDCRANLKPQGRLLFEIGCD 241 Query: 231 QKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 Q V + + V+ KD GNDRV+ Sbjct: 242 QGRQVSEMMQFAGFSDVHVIKDLAGNDRVV 271 >gi|238923859|ref|YP_002937375.1| putative rRNA or tRNA methylase [Eubacterium rectale ATCC 33656] gi|238875534|gb|ACR75241.1| predicted rRNA or tRNA methylase [Eubacterium rectale ATCC 33656] Length = 283 Score = 128 bits (322), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 79/210 (37%), Positives = 115/210 (54%), Gaps = 8/210 (3%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110 + I+G ++F ++ ++S+ PR +TE LV+ AL P + R+LD+ TG+G Sbjct: 70 LQYIVGEQEFMGLKFRVNSNVLIPRQDTETLVEEALKVIEPGM------RVLDMCTGSGC 123 Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170 + +++LK + G DIS +AL +AK NA NGV F+ +SD F V+ ++DVIVS Sbjct: 124 IIISILKNTTNVDGAACDISKQALNVAKENARINGVFVDFE--RSDLFEHVDEMYDVIVS 181 Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230 NPPYI S + L EV F+P +LDG DGL YR I +L G EIG + Sbjct: 182 NPPYIRSDEIPHLMPEVSVFEPHEALDGSEDGLLFYRRIIKDCRANLKPQGRLLFEIGCD 241 Query: 231 QKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 Q V + + V+ KD GNDRV+ Sbjct: 242 QGRQVSEMMQFAGFSDVHVIKDLAGNDRVV 271 >gi|294635784|ref|ZP_06714244.1| protein-(glutamine-N5) methyltransferase [Edwardsiella tarda ATCC 23685] gi|291090884|gb|EFE23445.1| protein-(glutamine-N5) methyltransferase [Edwardsiella tarda ATCC 23685] Length = 278 Score = 128 bits (322), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 87/260 (33%), Positives = 137/260 (52%), Gaps = 12/260 (4%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 RD+ L V+G ++ ++ L Q L + R + E + ++G R+F+++ Sbjct: 23 RDAEILLEHVSGKGRSFILAFGETRLTAAQLERLAALLARREQGEPVAYLIGQREFWSLA 82 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L +S T PRP+TE LV+ AL R+ R +I+DLGTGTGA+ LAL E P + Sbjct: 83 LEVSPATLIPRPDTECLVEQALQ----RLPARP-AQIVDLGTGTGAIALALASERPDCRV 137 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183 V+ + +A+ +A+ NA G++ R + LQ WF+ + G FD+IV+NPPYI++ D Sbjct: 138 SAVEFNPEAVALARRNAERLGLA-RVEILQGSWFAPLAGRRFDMIVANPPYIDA---DDA 193 Query: 184 GLEVRD--FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 L + D F+P +L GL+ R IA +L +G +E G+ Q V + Sbjct: 194 HLSLGDVRFEPASALVAAEQGLADLRIIASQAPHYLAAEGWLLLEHGWQQGAAVRALLND 253 Query: 242 RKLFLVNAFKDYGGNDRVLL 261 V + +DYG N+RV L Sbjct: 254 VGFSRVESVRDYGDNERVTL 273 >gi|227486770|ref|ZP_03917086.1| polypeptide chain release factor methyltransferase HemK [Anaerococcus lactolyticus ATCC 51172] gi|227235240|gb|EEI85255.1| polypeptide chain release factor methyltransferase HemK [Anaerococcus lactolyticus ATCC 51172] Length = 264 Score = 128 bits (322), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 82/253 (32%), Positives = 135/253 (53%), Gaps = 12/253 (4%) Query: 11 LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70 L + G S ++++ + L+ Q L + I + + +G +FY++RL + Sbjct: 18 LTYILGKSKSYILMNQNLELNSEQNQRLNDIINKRKVSYPLQYAIGQWEFYDLRLKVDER 77 Query: 71 TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK--ESPFFKGVGVD 128 PR ETE++VD + + + +ILD+GTGTGA+ LAL K E+ F +G D Sbjct: 78 ALIPRFETEIIVDYLIKSPMKK------EKILDIGTGTGAIALALAKNIENSFV--IGSD 129 Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVR 188 I +AL +A+ N V G ++ D ++SD F + G +D+I+SNPPYI+ + L E+ Sbjct: 130 IEDRALSLARENKVFTG-TKNVDFIKSDLFKDISGAYDLIISNPPYIDKKDYESLEKELY 188 Query: 189 DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN 248 F+P+ +L GG DGL YR I +L + G EIGYNQK + ++ ++ + Sbjct: 189 -FEPKSALYGGEDGLDFYREIIKNAGAYLCEGGHLVFEIGYNQKDILNKLLVNQGFVNIE 247 Query: 249 AFKDYGGNDRVLL 261 KD+ DR ++ Sbjct: 248 NIKDFNDFDRFII 260 >gi|108759552|ref|YP_633065.1| putative protein methyltransferase HemK [Myxococcus xanthus DK 1622] gi|108463432|gb|ABF88617.1| putative protein methyltransferase HemK [Myxococcus xanthus DK 1622] Length = 293 Score = 128 bits (322), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 87/253 (34%), Positives = 126/253 (49%), Gaps = 9/253 (3%) Query: 10 FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69 L V LS ++ VD D L + I R + E + G R+FYN + + Sbjct: 34 LLSHVLKLSRVRLYVDLDRPLSKDELGAYRALIERRMAGEPTQYLTGVREFYNRPFKVDA 93 Query: 70 DTFEPRPETELLVDSALAFSLPRIEKRDVV-RILDLGTGTGAVCLALLKESPFFKGVGVD 128 PRPETELLV++AL R+ +D R LD+ TG+G + ++L E P + D Sbjct: 94 RVLIPRPETELLVEAAL-----RMLPKDAPGRALDVCTGSGCIAISLAAERPQATVIATD 148 Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCLGLE 186 +S A +A+ NA GV++R LQ D F+ V F V+VSNPPYI S + L E Sbjct: 149 LSPDACALARENAQALGVADRVTVLQGDLFTPVPAGERFQVVVSNPPYIASGEIPGLSAE 208 Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246 VR +P ++LDGG DGL R + G + L GL ++EIG +Q V+ + + Sbjct: 209 VRR-EPTLALDGGPDGLVAVRRVVTGARQWLEPGGLLALEIGEDQGPAVLELLRAAGYAD 267 Query: 247 VNAFKDYGGNDRV 259 KD +R+ Sbjct: 268 ARVEKDLERRERM 280 >gi|153948102|ref|YP_001401038.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Yersinia pseudotuberculosis IP 31758] gi|152959597|gb|ABS47058.1| methyltransferase, HemK family [Yersinia pseudotuberculosis IP 31758] Length = 276 Score = 128 bits (322), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 88/257 (34%), Positives = 130/257 (50%), Gaps = 7/257 (2%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 RD+ L VTG + ++ ++ + Q +L R + E I ++G R+F+++ Sbjct: 22 RDAEILLSFVTGKARTYLLAFGETEITAEQLLWLETLANRREQGEPIAYLVGEREFWSLP 81 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L++SS T PRP+TE LV+ ALA LP + RILDLGTGTGA+ LAL E Sbjct: 82 LSVSSATLIPRPDTECLVEQALA-RLPSMP----CRILDLGTGTGAIALALASERRDCAV 136 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184 + VDI+ A+ +A+ NA + + LQ WF V G F +I SNPPYI++ Sbjct: 137 IAVDINADAVALARHNAKKLAI-DNVCFLQGSWFEPVSGRFALIASNPPYIDANDPHLNE 195 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 +VR ++P L +G++ I +L G +E G+ Q V ++ Sbjct: 196 GDVR-YEPHSVLVAAAEGMADLAAIVSQAPGYLEPGGWLMLEHGWQQANAVQERLKNSGF 254 Query: 245 FLVNAFKDYGGNDRVLL 261 V KDYG NDRV L Sbjct: 255 SAVMTCKDYGNNDRVTL 271 >gi|313889399|ref|ZP_07823047.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptococcus pseudoporcinus SPIN 20026] gi|313122231|gb|EFR45322.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptococcus pseudoporcinus SPIN 20026] Length = 276 Score = 128 bits (322), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 83/215 (38%), Positives = 122/215 (56%), Gaps = 12/215 (5%) Query: 50 SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109 S I G F + LT++ PRPETE LV+ LA + KR +++LD+GTG+G Sbjct: 67 SPQYITGKAYFRELILTVNESVLIPRPETEELVELILAEN-----KRHDLQLLDIGTGSG 121 Query: 110 AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIV 169 A+ ++L KE P +K DIS +ALE+A+ NA+ NG F QSD FSS+ G FD+IV Sbjct: 122 AIAISLKKERPSWKVTASDISLEALEVAQINALKNGTDIMFS--QSDLFSSLSGKFDIIV 179 Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY 229 SNPPYI + +G V +P ++L +GL+ YR+I + ++L+ G EIGY Sbjct: 180 SNPPYIAFADKEEVGRNVLASEPHLALFAEEEGLAIYRSILEQAEQYLSPQGKLYFEIGY 239 Query: 230 NQK---VDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 Q D+V+ K F + +D G DR+++ Sbjct: 240 KQGQALFDLVKTNFPEKRFRLK--QDCYGKDRMVI 272 >gi|223935327|ref|ZP_03627245.1| protein-(glutamine-N5) methyltransferase, release factor-specific [bacterium Ellin514] gi|223896211|gb|EEF62654.1| protein-(glutamine-N5) methyltransferase, release factor-specific [bacterium Ellin514] Length = 289 Score = 128 bits (322), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 81/217 (37%), Positives = 114/217 (52%), Gaps = 6/217 (2%) Query: 49 ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAF--SLPRIEKRDVVRILDLGT 106 E + ILG F + ++ PRPETELL + F SLP V LD GT Sbjct: 70 EPLQHILGSTCFCGLEFEVNPKVLIPRPETELLAELGWQFLNSLPSSPTPPVA--LDYGT 127 Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GL- 164 G+G + + + +SP + +DIS AL A+ NA T+ + R D F++V GL Sbjct: 128 GSGCLAVTVAAKSPTAQLHALDISPDALATAQKNAATHQMGSRIQFHLGDGFAAVPPGLQ 187 Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224 F++I+SNPPYI S + L EVRD DPR++LDGG DGL YR +A + L +G Sbjct: 188 FNLIISNPPYIASDEIATLQPEVRDHDPRLALDGGRDGLDFYRRLAKEAAPRLLPNGKIM 247 Query: 225 VEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 +E G Q + ++FE K + DY G R+L+ Sbjct: 248 LEFGEGQAEAIQKLFEDEKWVVEGVKADYSGRLRILI 284 >gi|300172697|ref|YP_003771862.1| protein methyltransferase prmC [Leuconostoc gasicomitatum LMG 18811] gi|299887075|emb|CBL91043.1| Protein methyltransferase prmC [Leuconostoc gasicomitatum LMG 18811] Length = 335 Score = 128 bits (321), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 82/221 (37%), Positives = 123/221 (55%), Gaps = 5/221 (2%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101 + + + +E + ILG FY + S PRPETE LV+ L + + K V + Sbjct: 113 LAKLMNNEPVQYILGHAPFYGREFMVDSRVLIPRPETEQLVEWILKDAGSKNGKP--VSV 170 Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 LD+GTGTGA+ L+ E+P +G DIS AL +A+ NA G++ +QSD +S+V Sbjct: 171 LDIGTGTGAIIETLMLENPRVRGFAADISSGALAVAEMNAQRFGLN-YLHLVQSDVYSAV 229 Query: 162 EGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220 EGL FD+IVSNPPYI + D + V +++P +L DGL+ Y IA ++ +L+ + Sbjct: 230 EGLEFDIIVSNPPYIATTDEDEMADNVLEYEPHTALFADHDGLAIYEKIAADLALYLSDN 289 Query: 221 GLCSVEIGYNQKVDVVRIFE-SRKLFLVNAFKDYGGNDRVL 260 G EIGY Q VV + + + V KD+ G DR++ Sbjct: 290 GRAYFEIGYKQGQQVVSMMQHALPQAEVTLKKDFSGLDRMV 330 >gi|241763795|ref|ZP_04761841.1| modification methylase, HemK family [Acidovorax delafieldii 2AN] gi|241366927|gb|EER61332.1| modification methylase, HemK family [Acidovorax delafieldii 2AN] Length = 284 Score = 128 bits (321), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 81/234 (34%), Positives = 120/234 (51%), Gaps = 6/234 (2%) Query: 25 DPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDS 84 D D++ + Q FL R E + + G ++FY + L + + +PRP+TE LVD Sbjct: 47 DTDALAPEVQAQFL-GLCQRRAAGEPVAYLTGRKEFYGLPLCVDARVLDPRPDTETLVDW 105 Query: 85 ALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN 144 AL P + + RI+DLGTG+GA+ LAL + P + +GVD S AL +A++NA Sbjct: 106 ALEVIAPLSDPQHPPRIVDLGTGSGAIALALQHQRPTAEVLGVDASPDALAVAQANAQRL 165 Query: 145 GVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204 + +F +QS W + V+G+FD IVSNPPYI + L +P +L G DGL Sbjct: 166 VLPVQF--VQSHWLTGVDGVFDAIVSNPPYIPAHDPHLAALT---HEPLQALASGADGLQ 220 Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258 R I RHL G +E G++Q V + ++ V + D G R Sbjct: 221 DIRQIVVQAPRHLKPGGWLLLEHGHDQAGAVSALLRAQGFAQVQSRNDLAGIAR 274 >gi|315127041|ref|YP_004069044.1| N5-glutamine methyltransferase, modifies release factors RF-1 and RF-2 [Pseudoalteromonas sp. SM9913] gi|315015555|gb|ADT68893.1| N5-glutamine methyltransferase, modifies release factors RF-1 and RF-2 [Pseudoalteromonas sp. SM9913] Length = 279 Score = 128 bits (321), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 86/239 (35%), Positives = 126/239 (52%), Gaps = 16/239 (6%) Query: 26 PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85 P+ L D Q A R L E + I G+R+F++++L ++ T PRP+TE LV+ A Sbjct: 46 PEKQLTDEQSQAFERACERRLNGEPVSHITGYREFWSLQLEVNPTTLIPRPDTETLVELA 105 Query: 86 LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN----A 141 L+ ++P + ++LDLGTGTGA+ LAL E P + + VD A+ +AK N A Sbjct: 106 LSCNVP-----NDAKVLDLGTGTGAIALALGSEMPTWDIIAVDRIDDAVALAKRNQKRLA 160 Query: 142 VTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200 + N E QS+WFS++ FD+IV+NPPYIE +VR F+P +L Sbjct: 161 INNVCVE-----QSNWFSALNNKKFDLIVTNPPYIEYNDKHLHQGDVR-FEPLSALVADD 214 Query: 201 DGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRV 259 GL+ + I +L+ +G +E G+ Q V IF V+ KD G NDRV Sbjct: 215 AGLADIKQIITQSRDYLHSNGYLLIEHGFEQSAAVRHIFNQMAFINVSTVKDLGNNDRV 273 >gi|313891849|ref|ZP_07825454.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Dialister microaerophilus UPII 345-E] gi|313119843|gb|EFR43030.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Dialister microaerophilus UPII 345-E] Length = 288 Score = 128 bits (321), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 78/219 (35%), Positives = 123/219 (56%), Gaps = 10/219 (4%) Query: 50 SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGT 108 S+ ++G +DF + ++ PRP+TE V+ + +I K D+ + + D+G G+ Sbjct: 75 SVATLIGEKDFMGFKFFVNDKVLIPRPDTETWVEKVI-----QIHKNDIELFVADIGCGS 129 Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFD 166 GA+ + LK KGVG+DIS A+EI+K N + R + + D+F++++ FD Sbjct: 130 GAIICSFLKYCKNAKGVGIDISDDAIEISKKNIKNLSLENRIELRKGDFFNALKKGEKFD 189 Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE 226 I SNPPYI + + L EV++ +P I+LDGG DGL+ YR IA+ + LN G +VE Sbjct: 190 GIFSNPPYIPTDDIKFLQKEVKN-EPLIALDGGKDGLNFYRKIAENAEKFLNSGGFLAVE 248 Query: 227 IGYNQKVDVVRIFESRKLFL-VNAFKDYGGNDRVLLFCR 264 +G +Q + V +FES F KDYG +R + R Sbjct: 249 VGIHQSLIVKEMFESTGYFTDFEIIKDYGNIERAVYCIR 287 >gi|295095635|emb|CBK84725.1| [protein release factor]-glutamine N5-methyltransferase [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 276 Score = 128 bits (321), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 89/258 (34%), Positives = 133/258 (51%), Gaps = 8/258 (3%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 RD+ L VTG + ++ ++ L Q+ L + R E + ++ R+F+++ Sbjct: 22 RDAEILLEHVTGKARTYLLAFGETALTAEQQSQLEALLARRKTGEPVAHLVCEREFWSLP 81 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L +S+ T PRP+TE LV+ ALA LP +ILDLGTGTGA+ LAL E P Sbjct: 82 LYVSAATLIPRPDTECLVEQALA-RLP----AQPCQILDLGTGTGAIALALASERPDCTV 136 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183 VD+ A+ +A+ N G++ LQS WF+++E +F++IVSNPPYI+ Sbjct: 137 TAVDVMPDAVALARRNVERLGLN-NVSVLQSSWFAALESRMFEMIVSNPPYIDEDDPHLA 195 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 +VR F+P +L GL+ I +HL G VE G+ Q V +F Sbjct: 196 QGDVR-FEPLTALVAANQGLADLDHIVTTSRQHLLPGGWLLVEHGWTQGEAVRALFTRAG 254 Query: 244 LFLVNAFKDYGGNDRVLL 261 V +DYGGN+R+ L Sbjct: 255 YAAVETCRDYGGNERLTL 272 >gi|304317930|ref|YP_003853075.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302779432|gb|ADL69991.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 277 Score = 128 bits (321), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 95/263 (36%), Positives = 143/263 (54%), Gaps = 14/263 (5%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESI--HRILGWRDFYNV 63 +S + L G S ++++ D L D F V L+ + I+G + F + Sbjct: 24 ESEALLSFTLGASKEYLLINRDKELTDDS--FNKYMEVLDLRKSGMPYQYIVGEKHFMGL 81 Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 +S PR +TE+LV+ L R++ D V LD+GTG+GA+ +++ K K Sbjct: 82 IFNVSPSVLIPRNDTEILVEEVLK----RLKSGDTV--LDIGTGSGAIAVSIAKYKDV-K 134 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGL-FDVIVSNPPYIESVIVD 181 VDIS ALE+AK NA NGVS++ ++SD FSS+ +G+ FD+IVSNPPYI S ++ Sbjct: 135 VYAVDISDGALEVAKENADINGVSDKVIFIKSDLFSSIPDGIRFDLIVSNPPYIRSNEIN 194 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 L EV+ +P+I+LDGG DGL+ YR I ++ G+ + E+G++Q DV I Sbjct: 195 ELQEEVKR-EPKIALDGGEDGLTFYRRIVKDSVNYIKFGGIIAFEVGFDQAWDVKDILVD 253 Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264 + KD G DRV+L R Sbjct: 254 GGYSDIEVVKDLQGIDRVVLGKR 276 >gi|329929004|ref|ZP_08282806.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Paenibacillus sp. HGF5] gi|328936993|gb|EGG33422.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Paenibacillus sp. HGF5] Length = 296 Score = 128 bits (321), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 81/244 (33%), Positives = 126/244 (51%), Gaps = 10/244 (4%) Query: 1 MQALRDSHSFLCRVTGLSS---HQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGW 57 M+ R++ L V GLS + + DP + +R L AI R + I+G Sbjct: 31 MEPQRNAQLLLEHVLGLSGTSYYMALTDP---FPEGRRLALEEAITRKAEGVPAQYIIGE 87 Query: 58 RDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALL 116 ++FY ++ PRPETELLV++ L + + D ++++D+GTG+GA+ + L Sbjct: 88 QEFYGRPFDVTPAVLIPRPETELLVEAVLKYGQELTPRPDGGLKVVDIGTGSGAIAITLA 147 Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYI 175 +S + DIS ALE+A NA G R + Q + G+ D++VSNPPYI Sbjct: 148 LQSKGWDVFASDISSDALEVAARNAKKLGA--RVEFRQGNLLEPFAGMGPDILVSNPPYI 205 Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235 + ++ L EVRD++PR +LDGG DGL+ YR + +S L + E+G Q DV Sbjct: 206 PAEDIEELQPEVRDYEPRTALDGGPDGLNPYRIMMAQLSLLSAPPRLIAFELGMGQAGDV 265 Query: 236 VRIF 239 + Sbjct: 266 AELL 269 >gi|324992932|gb|EGC24852.1| protein-(glutamine-N5) methyltransferase [Streptococcus sanguinis SK405] gi|325687438|gb|EGD29459.1| protein-(glutamine-N5) methyltransferase [Streptococcus sanguinis SK72] Length = 276 Score = 128 bits (321), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 81/218 (37%), Positives = 116/218 (53%), Gaps = 12/218 (5%) Query: 46 LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLG 105 L H+ I+G DF+ + L + PRPETE LV+ L+ + + + ILD+G Sbjct: 63 LAHKPAQYIIGSSDFHGLTLKVDERVLIPRPETEELVELILSEN-----RESSLSILDIG 117 Query: 106 TGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF 165 TG+GA+ L L P ++ D+S AL +A NA + G+S F +QSD F ++ G F Sbjct: 118 TGSGAIALTLANSRPDWQITASDLSGDALSLATENAQSCGLSLTF--IQSDCFEAISGNF 175 Query: 166 DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225 D+IVSNPPYI D +GL V +P ++L DG + YR IA+ HL K G + Sbjct: 176 DIIVSNPPYISEADKDEVGLNVLTSEPHMALFAEEDGYAVYRKIAEQAGDHLTKKGKIYL 235 Query: 226 EIGYNQKVDVVRIFESRKLF---LVNAFKDYGGNDRVL 260 EIGY Q V + +K F + KD G DR++ Sbjct: 236 EIGYKQGDGVRELL--KKSFPQKRIRVLKDRFGKDRMV 271 >gi|157145533|ref|YP_001452852.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Citrobacter koseri ATCC BAA-895] gi|157082738|gb|ABV12416.1| hypothetical protein CKO_01276 [Citrobacter koseri ATCC BAA-895] Length = 277 Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 91/258 (35%), Positives = 130/258 (50%), Gaps = 8/258 (3%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 RD+ L VTG + ++ ++ L D QR L + R + E + + G R+F+++ Sbjct: 22 RDAEILLGHVTGKARTFILAFGETALTDTQREQLAQLLARRQRGEPVAHLTGIREFWSLP 81 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L +S T PRP+TE LV+ ALA LP RILDLGTGTGA+ LAL E P + Sbjct: 82 LFVSPATLIPRPDTECLVEQALA-RLP----DSPCRILDLGTGTGAIALALATERPDCEV 136 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183 VD A+ +A NA + LQSDWF+++ G FD+IVSNPPYI++ Sbjct: 137 TAVDRMPDAVALAGRNAQHLAI-HNVRILQSDWFAALPGQQFDMIVSNPPYIDAHDPHLA 195 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 +VR F+P +L +G++ I L G +E G+ Q V V Sbjct: 196 QGDVR-FEPLSALVADDNGMADITHIIAQARHALAPGGYLLLEHGWQQGVAVRTALAQAG 254 Query: 244 LFLVNAFKDYGGNDRVLL 261 V +DYG N+R+ L Sbjct: 255 YVQVETCRDYGDNERITL 272 >gi|303228389|ref|ZP_07315222.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Veillonella atypica ACS-134-V-Col7a] gi|302516891|gb|EFL58800.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Veillonella atypica ACS-134-V-Col7a] Length = 289 Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 89/259 (34%), Positives = 132/259 (50%), Gaps = 9/259 (3%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D L V G + + + D L+ + ++ K S+ + G +DF + Sbjct: 30 DGEVLLSHVLGKNRIYLYTNYDQPLEQEELDRFRPLVIERAKGYSVASLTGTKDFMGLTF 89 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 ++ PRP+TE LV+ + L ++D +RILD+ TG G + L+LL P G+ Sbjct: 90 AVNDKVLIPRPDTETLVE----YVLSTYHQQDAIRILDMCTGPGTILLSLLHYLPTATGM 145 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG---LFDVIVSNPPYIESVIVDC 182 G+DIS ALEIA N + R + +SD FS +E LFDVIVSNPPYI Sbjct: 146 GLDISRDALEIATKNQEAFKLENRSEFHESDMFSYLEHHNELFDVIVSNPPYIRLEDKKI 205 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 L +V + +P I+L GG DGL YR +A +L GL + E+GY+Q DV + ES Sbjct: 206 LSPDVLN-EPHIALFGGEDGLDFYRQLAMECVTYLKPYGLVAFEVGYDQAEDVKSLLESV 264 Query: 243 KLFLVNAF-KDYGGNDRVL 260 ++ +F D G +RV+ Sbjct: 265 GSYVDISFAADLAGINRVV 283 >gi|262375290|ref|ZP_06068523.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Acinetobacter lwoffii SH145] gi|262309544|gb|EEY90674.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Acinetobacter lwoffii SH145] Length = 272 Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 82/258 (31%), Positives = 127/258 (49%), Gaps = 10/258 (3%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 +++ L +T + S +++ D L Q + + R E + + G + F+ + Sbjct: 19 QENAWLLEHITKIDSFDLLMKKDQELTPEQEQAYKDGLARIAAGEPLAYVTGSQPFWTLD 78 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L ++ DT PRP+TE+LV++ L LP + R++DLGTGTGA+ L+L E + Sbjct: 79 LKVTKDTLVPRPDTEVLVETVLKLDLP-----EDARVVDLGTGTGAIALSLASERSNWTV 133 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCL 183 DI LE+AK NA + + E + + W FD IVSNPPYI++ D + Sbjct: 134 TASDIYEPTLEVAKYNAEQHDI-ENVEFVLGSWLKPFGRQFFDAIVSNPPYIDA---DDV 189 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 ++ +P +L GL+ I +HL +G +E GYNQ V +F+ Sbjct: 190 HMQNLATEPERALVADKKGLADIEMIILQAKKHLTVNGWVVLEHGYNQADAVQHLFKQAG 249 Query: 244 LFLVNAFKDYGGNDRVLL 261 V KDYGGNDRV L Sbjct: 250 YKQVRTVKDYGGNDRVTL 267 >gi|239617253|ref|YP_002940575.1| modification methylase, HemK family [Kosmotoga olearia TBF 19.5.1] gi|239506084|gb|ACR79571.1| modification methylase, HemK family [Kosmotoga olearia TBF 19.5.1] Length = 282 Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 72/204 (35%), Positives = 112/204 (54%), Gaps = 7/204 (3%) Query: 7 SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66 + + L + + H+V VD + +D + L +A+ R E + I+GW+ F +L Sbjct: 26 TFTLLESIAMIEKHKVFVDTATEIDTKTCKLLFDAVKRLKAGEPLDYIIGWKYFLGAKLN 85 Query: 67 LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126 L S PRPETE LV+ + + ++V D+GTG+GA+ +AL K P K Sbjct: 86 LDSRVLIPRPETEELVEMIIN----EHKGKNVKAFADVGTGSGAIAIALAKHFPASKIYA 141 Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFD---VIVSNPPYIESVIVDCL 183 DIS ALE+A NA NGV R L + +E D +IVSNPPY+++ +++ L Sbjct: 142 TDISKPALELAFENAKINGVEGRIAFLHGKNLNPLEAYMDEIEIIVSNPPYVKTTVLESL 201 Query: 184 GLEVRDFDPRISLDGGIDGLSHYR 207 V+D++P I+LDGG DG++ +R Sbjct: 202 DKRVKDYEPIIALDGGEDGMNFFR 225 >gi|317153067|ref|YP_004121115.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Desulfovibrio aespoeensis Aspo-2] gi|316943318|gb|ADU62369.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Desulfovibrio aespoeensis Aspo-2] Length = 284 Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 88/264 (33%), Positives = 132/264 (50%), Gaps = 12/264 (4%) Query: 7 SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66 + + V GL+ + ++ D L + + + R E + +LG R+FY + + Sbjct: 26 AQVLVAEVLGLTRLGLSLERDRALTPEETDRIRSLAARRASGEPLAYLLGRREFYGLDFS 85 Query: 67 LSSDTFEPRPETELLVDSAL-AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 ++ D PRPETE ++++ L AFS VR DLGTG+G + + L P G+ Sbjct: 86 VTPDVLIPRPETEHVIEAVLNAFS-----PDTPVRFADLGTGSGILAVTLAHCFPHATGL 140 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVDCL 183 VD+S AL +A+ NA +GV +R +Q D+ + +G FD+IVSNPPY+ + Sbjct: 141 AVDLSGPALAVARRNARAHGVHDRIAFVQGDFTGPILGKGRFDLIVSNPPYVTDEEFERA 200 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 EV F+PR +L G DGL H R + L GL +EIG Q V+ V I S + Sbjct: 201 SREVTGFEPRTALVSGPDGLDHIRAMLPRALEALRPGGLLLMEIGCGQ-VEGVNIITSNQ 259 Query: 244 LFL---VNAFKDYGGNDRVLLFCR 264 V KD G+DRV+ R Sbjct: 260 CLESRDVGVIKDLAGHDRVVSMRR 283 >gi|227328866|ref|ZP_03832890.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 281 Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 87/258 (33%), Positives = 138/258 (53%), Gaps = 8/258 (3%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 RD+ L VTG + ++ ++ L+ ++ LT + R + E I ++G R+F+++ Sbjct: 22 RDAEILLGFVTGKARTFLLAFGETELNAAEQQQLTELLARREQGEPIAYLIGVREFWSLP 81 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L +S T PRP+TE LV+ AL LP+ +LDLGTGTGA+ LAL E + Sbjct: 82 LAVSPATLIPRPDTECLVEQAL-LRLPQTP----CAVLDLGTGTGAIALALASERRDCRV 136 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCL 183 GVD+ A+ +A NA G+ + L W+S ++ F +I SNPPYI++ V Sbjct: 137 TGVDVQPDAVALATKNAQQLGL-DNASFLSGSWYSPLDHTRFALIASNPPYIDADDVHLS 195 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 +VR F+P +L +GL+ RTI + +L+ +E G+ Q V ++ ++R Sbjct: 196 QGDVR-FEPASALIAADNGLADLRTIIESAPHYLDDGAWLLLEHGWQQADMVRQLLQARG 254 Query: 244 LFLVNAFKDYGGNDRVLL 261 + +DYGGNDRV L Sbjct: 255 FTQIETCQDYGGNDRVSL 272 >gi|160940108|ref|ZP_02087453.1| hypothetical protein CLOBOL_04997 [Clostridium bolteae ATCC BAA-613] gi|158436688|gb|EDP14455.1| hypothetical protein CLOBOL_04997 [Clostridium bolteae ATCC BAA-613] Length = 285 Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 78/214 (36%), Positives = 118/214 (55%), Gaps = 9/214 (4%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110 + + G ++F ++ PR +TE LV+ L R EKR +LD+ TG+G Sbjct: 73 LQHLTGTQEFMGFEFLVNEHVLIPRQDTETLVELVLEEQNDR-EKR----VLDMCTGSGC 127 Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNA--VTNGVSERFDTLQSDWFSSVEG--LFD 166 + ++L + +D+S +AL++A N + G F+ +S+ FS++E FD Sbjct: 128 IAISLALMGRYRHVAALDVSAEALKVAAGNRDRLLGGYEGGFELFESNMFSALETDRTFD 187 Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE 226 VIVSNPPYI S +++ L EVRD +PRI+LDG DGL+ YR +A+ HL + G +E Sbjct: 188 VIVSNPPYIPSRVIEGLAPEVRDHEPRIALDGSDDGLTFYRILAEEARNHLAEGGSIYME 247 Query: 227 IGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 IGY+Q V +F S V F+D G DRV+ Sbjct: 248 IGYDQSEAVEGLFRSGGYRDVRTFQDLAGQDRVV 281 >gi|329113398|ref|ZP_08242179.1| Bifunctional methyltransferase [Acetobacter pomorum DM001] gi|326697223|gb|EGE48883.1| Bifunctional methyltransferase [Acetobacter pomorum DM001] Length = 292 Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 84/260 (32%), Positives = 137/260 (52%), Gaps = 7/260 (2%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 R++ L L+ Q++ + + FF + + R HE I G + F+++ Sbjct: 34 REARLLLIHALSLTPEQLLARSPTENVPSEPFF--SYVKRRAAHEPFAYITGSKGFWSLD 91 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L +S + PR +TE L+ S L + R ++ V ILDLGTGTG + LA L E P +G Sbjct: 92 LAVSPASLVPRGDTETLITSLLEY---RPDQTSVQNILDLGTGTGCLLLAALAEYPKARG 148 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVDC 182 VGVDI+ +A +A +NA G+ + + ++W +++ FDV++SNPPYI + + Sbjct: 149 VGVDINPQAAMLAHANAQRCGMQDHALFIAAEWDAALAPNARFDVVLSNPPYIPTSDLAD 208 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 L EVR+ +P +LDGG DGLS YR + + L G+ +EIG Q+ + + + Sbjct: 209 LMREVREHEPVRALDGGNDGLSAYRYLCGRLPFLLVDGGVAVLEIGIGQEEALRALAATN 268 Query: 243 KLFLVNAFKDYGGNDRVLLF 262 L +V+ D G R ++ Sbjct: 269 ALRVVDVKADLAGIARAVVL 288 >gi|154498436|ref|ZP_02036814.1| hypothetical protein BACCAP_02425 [Bacteroides capillosus ATCC 29799] gi|150272504|gb|EDM99689.1| hypothetical protein BACCAP_02425 [Bacteroides capillosus ATCC 29799] Length = 287 Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 86/258 (33%), Positives = 131/258 (50%), Gaps = 6/258 (2%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 ++ +C G + Q + D D + + R L+ E + ++G +FY + L Sbjct: 27 EARELVCFAAGKNREQFLRDMSLYASDEVEAKVAELMNRRLEGEPVAYLIGEWEFYGLPL 86 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 +S D PR +TE+L + A+ L + R+LDL G+G V LA+ +P + V Sbjct: 87 DISRDVLIPRADTEVLAEQAI---LAARAAGEGARVLDLCAGSGCVGLAVAANAPQCRTV 143 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWF---SSVEGLFDVIVSNPPYIESVIVDC 182 D+S +AL+I + N N ++ R +Q+D SSV FDVI SNPPYI + +D Sbjct: 144 LADVSEEALKICRQNIRRNDLNARVTCVQADARQAPSSVLWDFDVIASNPPYIPTRDIDG 203 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 L VRD++P ++LDGG DGL YR IA+ L G+ E+G Q DV +I Sbjct: 204 LDSSVRDYEPHLALDGGDDGLDFYRDIAEKWRTALRLGGVLLFEVGIGQAADVEQILARC 263 Query: 243 KLFLVNAFKDYGGNDRVL 260 + F+D GG RV+ Sbjct: 264 GYEDIETFQDTGGIWRVV 281 >gi|260914190|ref|ZP_05920663.1| protein methyltransferase HemK [Pasteurella dagmatis ATCC 43325] gi|260631823|gb|EEX50001.1| protein methyltransferase HemK [Pasteurella dagmatis ATCC 43325] Length = 308 Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 91/267 (34%), Positives = 132/267 (49%), Gaps = 16/267 (5%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L VT + ++ P++ L + L + R K E I ILG ++F+++ L Sbjct: 38 DAMVLLSEVTQKTRAYILAFPETHLSADKLKQLEKYLTRRAKGEPIAYILGEKEFWSLPL 97 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEK---RDVVRILDLGTGTGAVCLALLKESPFF 122 +S T PRP+TE+LV+ AL + R+ + ILDLGTGTGA+ LAL E Sbjct: 98 KVSKHTLIPRPDTEILVEQALEIAKQRLNSSYFSGELTILDLGTGTGAIALALASELKML 157 Query: 123 KG--------VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNP 172 + VD +A+E+A+ NA N + F LQS WF +++ FDVIVSNP Sbjct: 158 TQKCGANLNILAVDRIAEAVELARENAKYNHLEVTF--LQSSWFDALDPSIKFDVIVSNP 215 Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232 PYI+ +VR F+P +L +G + R I + + L G +E G+ Q Sbjct: 216 PYIDEKDSHLTQGDVR-FEPLSALVAEEEGYADLRHIIEQAPQFLKPQGYLLLEHGWLQG 274 Query: 233 VDVVRIFESRKLFLVNAFKDYGGNDRV 259 V IF V KDYG N+RV Sbjct: 275 EKVRSIFTENNWQQVQTLKDYGNNERV 301 >gi|254244444|ref|ZP_04937766.1| hypothetical protein PA2G_05302 [Pseudomonas aeruginosa 2192] gi|126197822|gb|EAZ61885.1| hypothetical protein PA2G_05302 [Pseudomonas aeruginosa 2192] Length = 276 Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 81/221 (36%), Positives = 120/221 (54%), Gaps = 8/221 (3%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101 I R E + ILG + F+++ L ++ T PRP+TELLV++ALA D + Sbjct: 58 IARRRNGEPVAYILGHQGFWSLDLEVAPHTLIPRPDTELLVETALA-----TLTADTATV 112 Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 LDLGTGTGA+ LAL E P + VD +A+ +A+ N + E + +S WFS++ Sbjct: 113 LDLGTGTGAIALALASERPLWTVTAVDRVEEAVALAERNR-QRLLLENVEVRRSHWFSAL 171 Query: 162 EGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220 +G F +IV NPPYI + +VR F+P+ +L G DGL R I +HL + Sbjct: 172 DGRRFRMIVGNPPYIPASDPHLSEGDVR-FEPKSALVAGSDGLDDIRQIVAQAPQHLLDE 230 Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 G +E GY+Q V + +R V+ +D GGN+R+ L Sbjct: 231 GWLLLEHGYDQGAAVRELLGARGFAGVHTLRDLGGNERITL 271 >gi|225175857|ref|ZP_03729850.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Dethiobacter alkaliphilus AHT 1] gi|225168781|gb|EEG77582.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Dethiobacter alkaliphilus AHT 1] Length = 283 Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 79/257 (30%), Positives = 126/257 (49%), Gaps = 5/257 (1%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 R++ L + G + + L Q + R E + G ++F + Sbjct: 26 REAQFLLTALLGCDAAWLYAHDQEKLTAPQWAEFQAWLARRATGEPFAYLAGQKEFMGLC 85 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 ++ D PRPETE LV++ ++ RIL++G G+GAV ++L K P + Sbjct: 86 FAVTPDVLIPRPETEFLVEAVAE----ELQAHTSPRILEIGAGSGAVAVSLAKLLPKARV 141 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCL 183 V VD+S ALEIA+ NA +GV+ R + L D ++ V + FD +VSNPPYI + + L Sbjct: 142 VAVDVSQAALEIAQKNAARHGVAGRVEFLAGDLYAPVADEYFDAVVSNPPYISAADILKL 201 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 +V+DF+PR++L GG DGL YR + + N+ + + E+G Q V + Sbjct: 202 QCDVKDFEPRLALCGGEDGLDFYRRLTGELDVLSNRPKMLAFEVGMGQAQAVAALCLKAG 261 Query: 244 LFLVNAFKDYGGNDRVL 260 KD G DR++ Sbjct: 262 YENTRQIKDLAGIDRII 278 >gi|15604677|ref|NP_221195.1| bifunctional N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase/tRNA (m7G46) methyltransferase [Rickettsia prowazekii str. Madrid E] gi|6225501|sp|Q9ZCB3|HEMK_RICPR RecName: Full=Bifunctional methyltransferase; Includes: RecName: Full=HemK protein homolog; AltName: Full=M.RprHemKP; Includes: RecName: Full=tRNA (guanine-N(7)-)-methyltransferase; AltName: Full=tRNA(m7G46)-methyltransferase gi|3861372|emb|CAA15271.1| POSSIBLE PROTOPORPHYRINOGEN OXIDASE (hemK) [Rickettsia prowazekii] gi|292572508|gb|ADE30423.1| Methylase of polypeptide chain release factors [Rickettsia prowazekii Rp22] Length = 518 Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 79/266 (29%), Positives = 134/266 (50%), Gaps = 15/266 (5%) Query: 10 FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69 L VT +++ + L + + + R L HE I I+G ++FY+ ++ Sbjct: 31 LLQHVTNKPIEHLLIKLNEQLSEAEIEAFEKLLERRLAHEPIAYIIGVKEFYSREFIVNK 90 Query: 70 DTFEPRPETELLVDSALAFSLPR--------IEKRDVV------RILDLGTGTGAVCLAL 115 PR +TE+LVD + + R ++ D V IL+LGTG+G + ++L Sbjct: 91 HVLIPRIDTEVLVDVVIGLVVSRNNLHMFSKLKSLDSVLTTQSYNILELGTGSGCIAISL 150 Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPY 174 L E P + DIS A+++AKSN++ V++R + S+WF ++ FD IVSNPPY Sbjct: 151 LCELPNTNIIATDISVDAIKVAKSNSIKYNVTDRIQIIHSNWFEKLDKQKFDFIVSNPPY 210 Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234 I + +E +++P I+L DGL Y IA + L +G +EIG++Q Sbjct: 211 ISHTEKLKMAIETINYEPSIALFAEEDGLEAYSIIAKNAKQFLKPNGKIILEIGFSQAAK 270 Query: 235 VVRIFESRKLFLVNAFKDYGGNDRVL 260 V +IF + + ++D ++RV+ Sbjct: 271 VSKIFLNYGYNIDYIYRDLQSHNRVI 296 >gi|270157831|ref|ZP_06186488.1| protein-(glutamine-N5) methyltransferase [Legionella longbeachae D-4968] gi|289163903|ref|YP_003454041.1| methyltransferase HemK [Legionella longbeachae NSW150] gi|269989856|gb|EEZ96110.1| protein-(glutamine-N5) methyltransferase [Legionella longbeachae D-4968] gi|288857076|emb|CBJ10891.1| putative methyltransferase HemK [Legionella longbeachae NSW150] Length = 268 Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 86/258 (33%), Positives = 136/258 (52%), Gaps = 11/258 (4%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 R++ L V + + P+++L +Q + + + K I ++G R+F+++ Sbjct: 14 REAEILLGHVLDKTRAYLFAHPETLLTPKQLAAFEHLMAQRAKGIPIAYLMGQREFWSLD 73 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L ++ T PR ETELLV AL F I + IL+LGTG+GA+ LAL KE P ++ Sbjct: 74 LKVNEHTLIPRHETELLVALALEF----IPDQPDTHILELGTGSGAIALALAKERPSWRI 129 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCL 183 V DIS AL++AK NA N + E + SDWFS + + + IV+NPPYI D Sbjct: 130 VACDISEDALKVAKENAQNNKI-ENINFFLSDWFSGIPQRQYHAIVTNPPYIAE---DDP 185 Query: 184 GLEVRD--FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 L+ D F+PR +L +GL+ + I + +L G+ +E G++QK V I Sbjct: 186 HLQQGDLRFEPRNALVSSQEGLADLQCIIEHGYEYLLPQGMLLLEHGFDQKSKVQAILNR 245 Query: 242 RKLFLVNAFKDYGGNDRV 259 + + ++D G+DRV Sbjct: 246 LRYKSIRCWQDIQGHDRV 263 >gi|238895294|ref|YP_002920029.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Klebsiella pneumoniae NTUH-K2044] gi|238547611|dbj|BAH63962.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length = 282 Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 91/258 (35%), Positives = 132/258 (51%), Gaps = 8/258 (3%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 RD+ L VTG + ++ ++ L + L +VR + E I ++G R+F+++ Sbjct: 22 RDAEILLGHVTGRARTWILAFGETTLSADEAAKLEALLVRRQRGEPIAHLVGQREFWSLP 81 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L +S T PRP+TE LV+ ALA LP RILDLGTGTGA+ LAL E P + Sbjct: 82 LFVSPATLIPRPDTECLVEQALA-RLPTAP----CRILDLGTGTGAIALALASERPDCEV 136 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCL 183 VD+ A+ +A NA ++ QSDWFS++ G F IVSNPPYI++ Sbjct: 137 TAVDVMPDAVALALRNAEHLSIAN-VTISQSDWFSALAGQRFATIVSNPPYIDAADPHLA 195 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 +VR F+P +L G GL+ I ++L G +E G+ Q V +F Sbjct: 196 EGDVR-FEPLTALVAGDQGLADLAHIIREGRQYLQPGGWMLLEHGWTQGEAVRALFREAG 254 Query: 244 LFLVNAFKDYGGNDRVLL 261 V +DYG N+R+ L Sbjct: 255 YLDVATCRDYGDNERLTL 272 >gi|152984205|ref|YP_001350645.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Pseudomonas aeruginosa PA7] gi|150959363|gb|ABR81388.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Pseudomonas aeruginosa PA7] Length = 276 Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 85/257 (33%), Positives = 129/257 (50%), Gaps = 8/257 (3%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L G + P+ ++ + I R E + ILG + F+++ L Sbjct: 22 DTELLLAAAMGKPRSFLRTWPERIVPREANELFDDWIARRRNGEPVAYILGHQGFWSLDL 81 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 ++ T PRP+TELLV++ALA D +LDLGTGTGA+ LAL E P + Sbjct: 82 EVAPHTLIPRPDTELLVETALA-----TLAADSATVLDLGTGTGAIALALASERPLWTVT 136 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLG 184 VD +A+ +A+ N + E + S WFS+++G F +IV NPPYI + Sbjct: 137 AVDRVEEAVALAERNR-QRLLLENVEVCHSHWFSALDGRRFRMIVGNPPYIPASDPHLSE 195 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 +VR F+P+ +L G DGL R I + R+L +G +E GY+Q V + +R Sbjct: 196 GDVR-FEPKSALVAGNDGLDDIRQIVEQAPRYLLAEGWLLLEHGYDQGAAVRDLLGARGF 254 Query: 245 FLVNAFKDYGGNDRVLL 261 V +D GGN+R+ L Sbjct: 255 AGVRTLRDLGGNERITL 271 >gi|120601500|ref|YP_965900.1| HemK family modification methylase [Desulfovibrio vulgaris DP4] gi|120561729|gb|ABM27473.1| [protein release factor]-glutamine N5-methyltransferase [Desulfovibrio vulgaris DP4] Length = 295 Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 80/259 (30%), Positives = 126/259 (48%), Gaps = 10/259 (3%) Query: 10 FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69 LC L +++ PD ++++ + + R E + I+G ++F+ ++ Sbjct: 37 ILCHALSLRRIDIMLTPDRIVEEADCILFSELVARRATGEPLAYIVGEKEFFGRDFAVNP 96 Query: 70 DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129 T PRPETE L+++AL SL + R +D GTG+G + + L E G+ +D+ Sbjct: 97 STLIPRPETEHLIETALE-SL----RSGPARFVDAGTGSGCIAVTLCAERADLSGLALDM 151 Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVDCLGLEV 187 S AL A NA +GV++R ++ D+ +S+ G D+ SNPPYI L EV Sbjct: 152 SAPALATASHNARRHGVAQRLAFVRGDFTTSLLRSGSLDLYASNPPYISKAEYTGLSREV 211 Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF-- 245 RDF+PR +L G GL H I +R L G+ +E G Q D+ +F Sbjct: 212 RDFEPRSALVPGDTGLEHATAIIAEATRVLRPHGILLMEFGCTQGADMASLFTPYSTLWE 271 Query: 246 LVNAFKDYGGNDRVLLFCR 264 +V +D G DR +F R Sbjct: 272 MVEVRRDLAGLDR-FIFAR 289 >gi|306820961|ref|ZP_07454581.1| protein-(glutamine-N5) methyltransferase [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304551075|gb|EFM39046.1| protein-(glutamine-N5) methyltransferase [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 279 Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 84/241 (34%), Positives = 127/241 (52%), Gaps = 8/241 (3%) Query: 24 VDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLV 82 +D LDD Q+ L V+ LK H+ IH I+G RDFY + PR +TE+LV Sbjct: 43 LDEKIALDDEQQIKL---FVQQLKNHKPIHYIIGQRDFYGYDFLVDEHVLIPRSDTEILV 99 Query: 83 DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142 ++A+ + + + I G G+G + + LLK+ VDI+ A++I+K NA Sbjct: 100 ENAVNLLKNKKKDLKGLEI---GVGSGIISITLLKKLKNLSMTAVDINDYAIDISKKNAE 156 Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202 GVS+R ++SD F +V G +D I+SNPPYI+ + L +V++++P +LDG +G Sbjct: 157 NLGVSDRLKLIKSDLFENVIGKYDFIISNPPYIDEKDMADLPEKVKNYEPYSALDGKKNG 216 Query: 203 LSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL-VNAFKDYGGNDRVLL 261 + Y I LN EIGYNQ + FE+ V +DYG NDRV + Sbjct: 217 MYFYNEIIKSGRTFLNDKFHIFFEIGYNQGEMIRHSFENCGYEADVKIIQDYGKNDRVAI 276 Query: 262 F 262 + Sbjct: 277 Y 277 >gi|238651092|ref|YP_002916950.1| bifunctional N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase/tRNA (m7G46) methyltransferase [Rickettsia peacockii str. Rustic] gi|238625190|gb|ACR47896.1| bifunctional N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase/tRNA (m7G46) methyltransferase [Rickettsia peacockii str. Rustic] Length = 524 Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 81/262 (30%), Positives = 131/262 (50%), Gaps = 21/262 (8%) Query: 22 VIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELL 81 ++++ D L++ + + R LKHE I I G ++FY+ ++ PR +TE+L Sbjct: 43 LLINLDEQLNEAKIEAFEKLLARRLKHEPIVYITGVKEFYSREFIVNKHVLIPRSDTEVL 102 Query: 82 VDSALAFSL-----PRIEKRD---------------VVRILDLGTGTGAVCLALLKESPF 121 VD P ++ D + IL+LGTG+G + ++LL E Sbjct: 103 VDVVFQCHSRESGNPEKKQPDPCFRGNDISENCNDKFLNILELGTGSGCIAISLLCELQN 162 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIV 180 + DIS A++I KSNA V++R + S+WF ++E FD IVSNPPYI Sbjct: 163 ANVIATDISLDAIDIIKSNAAKYEVTDRIQIIHSNWFENIETQKFDFIVSNPPYIAHSEK 222 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 + +E +++P I+L DGL Y IA+ + L +G +EIG+ Q+ V +IF Sbjct: 223 SEMAIETINYEPSIALFAEKDGLQAYFLIAENAKQFLKPNGKIILEIGFKQEEAVTQIFL 282 Query: 241 SRKLFLVNAFKDYGGNDRVLLF 262 + + +KD G+ RV+L Sbjct: 283 DHGYNIESVYKDLQGHSRVILL 304 >gi|145298194|ref|YP_001141035.1| protein-glutamine N-methyltransferase HemK [Aeromonas salmonicida subsp. salmonicida A449] gi|142850966|gb|ABO89287.1| Protein-glutamine N-methyltransferase HemK [Aeromonas salmonicida subsp. salmonicida A449] Length = 289 Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 89/267 (33%), Positives = 127/267 (47%), Gaps = 12/267 (4%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ LC + ++ P+ LD Q+ L + R L E I ++G R+F+++ L Sbjct: 23 DADVLLCHLLDCRRSYLMTWPERELDAAQQDRLQGWLTRRLAGEPIAHLVGEREFWSLPL 82 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV--RILDLGTGTGAVCLALLKESPFFK 123 +S T PRP+TE+LV+ ALA P+ D +LDLGTGTGA+ LAL E P Sbjct: 83 KVSPATLIPRPDTEVLVEQALARLPPKPASPDQAPCALLDLGTGTGAIALALKSERPDAD 142 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS-------SVEGLFDVIVSNPPYIE 176 VD +A +A+ N+ G+ WF S F +IVSNPPYI+ Sbjct: 143 VWAVDRMPEAAALARDNSAALGLP--ITVRDGSWFEPLCDPLLSQAPRFAMIVSNPPYID 200 Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236 +VR F+PR +L GL+ R I G HL G +E G+ Q V Sbjct: 201 GADPHLNKGDVR-FEPRSALVADEQGLADIRLIVAGAPAHLCPGGWLLLEHGWQQGEAVR 259 Query: 237 RIFESRKLFLVNAFKDYGGNDRVLLFC 263 ++ + V +DYG N+RV L C Sbjct: 260 QLLLQQGFSRVETVRDYGDNERVTLGC 286 >gi|303230838|ref|ZP_07317585.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Veillonella atypica ACS-049-V-Sch6] gi|302514598|gb|EFL56593.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Veillonella atypica ACS-049-V-Sch6] Length = 289 Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 83/239 (34%), Positives = 124/239 (51%), Gaps = 8/239 (3%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D L V G + + + D L+ + ++ K S+ + G +DF + Sbjct: 30 DGEVLLSHVLGKNRIYLYTNYDQPLEQEELDRFRPLVIERAKGHSVASLTGTKDFMGLTF 89 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 ++ PRP+TE LV+ + L ++D +RILD+ TG G + L+LL P G+ Sbjct: 90 AVNDKVLIPRPDTETLVE----YVLSSYHQQDSIRILDMCTGPGTILLSLLHYLPTATGM 145 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG---LFDVIVSNPPYIESVIVDC 182 G+DIS ALEIA N + R + +SD FS +E LFDVIVSNPPYI + Sbjct: 146 GLDISRDALEIATKNQEAFKLENRSEFHESDMFSYLEHHNELFDVIVSNPPYIRLEDKEI 205 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 L +V + +P I+L GG DGL YR +A ++L GL + E+GY+Q DV + E+ Sbjct: 206 LSPDVLN-EPHIALFGGEDGLDFYRHLAMECVKYLKPYGLVAFEVGYDQAEDVKSLLEA 263 >gi|261343908|ref|ZP_05971553.1| protein-(glutamine-N5) methyltransferase [Providencia rustigianii DSM 4541] gi|282568294|gb|EFB73829.1| protein-(glutamine-N5) methyltransferase [Providencia rustigianii DSM 4541] Length = 277 Score = 127 bits (319), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 96/261 (36%), Positives = 136/261 (52%), Gaps = 10/261 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A RD+ L TG S ++ ++ L + L + R E I I+G R+F++ Sbjct: 20 AKRDAQILLQHATGRSRTYILAFDETELSAHELQQLEELLQRREFGEPIAYIVGEREFWS 79 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +S T PRP+TE LV+ AL LP + RILDLGTGTGA+ LAL E P Sbjct: 80 LPLYVSPATLIPRPDTECLVEQAL-IRLPSTD----CRILDLGTGTGAIALALASERPNS 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGV-SERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIV 180 +GVD + +A+ +A+ N + + RF QSDWF+S+ LFD+IVSNPPYI+ + Sbjct: 135 TVIGVDFNPEAVVLAERNQQRLSIFNVRFS--QSDWFTSLSNELFDMIVSNPPYIDEGDI 192 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 +VR F+P +L GLS I R+L + G +E G+ Q + V +F Sbjct: 193 HLNQGDVR-FEPATALIAEEHGLSDLAHIIAESKRYLKQQGWLLLEHGWQQGLAVRELFS 251 Query: 241 SRKLFLVNAFKDYGGNDRVLL 261 + DYGG DRV L Sbjct: 252 ENGYTNIETCLDYGGKDRVSL 272 >gi|326796199|ref|YP_004314019.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Marinomonas mediterranea MMB-1] gi|326546963|gb|ADZ92183.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Marinomonas mediterranea MMB-1] Length = 278 Score = 127 bits (319), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 87/220 (39%), Positives = 117/220 (53%), Gaps = 9/220 (4%) Query: 44 RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103 R L E I ++G +DF+ + L +S T PRP+TE LV+ AL + +EK + ILD Sbjct: 62 RRLVGEPIAYLIGKQDFWTLELDVSPTTLIPRPDTERLVEVALDL-IAGVEKPN---ILD 117 Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-- 161 LGTGTGA+ LAL E G D +A+E+A NA N +S F + SDWFS V Sbjct: 118 LGTGTGAIALALAYERKDALVSGADCVKQAVELATRNAEKNALSVNF--IHSDWFSEVPS 175 Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221 + F +IVSNPPYI+ +VR F+P +L +G+ I +L+ G Sbjct: 176 DNQFHLIVSNPPYIDPNDKHLSQGDVR-FEPDSALTADQEGMGDINRILSEAPHYLHDTG 234 Query: 222 LCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 + E GY+Q V F SR V F DYGGNDRV + Sbjct: 235 WLAFEHGYDQGEKVRLAFASRGFLSVETFADYGGNDRVTI 274 >gi|260753917|ref|YP_003226810.1| modification methylase, HemK family [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|258553280|gb|ACV76226.1| modification methylase, HemK family [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 286 Score = 127 bits (319), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 88/276 (31%), Positives = 145/276 (52%), Gaps = 18/276 (6%) Query: 2 QALRDSHSFLCRVTG--------LSSHQVIVDPDSVL-----DDRQRFFLTNAIVRSLKH 48 +ALR++ L V+ L +H + ++ D++L + AI R ++ Sbjct: 16 EALREAARDLATVSMTARLDAELLMAHSLGIERDALLLGSWGEKEAPLSFFEAIKRRKQN 75 Query: 49 ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108 E + ILG+RDF+ +RLT++ D PRP++E L+++A+A+ R + ILDLGTG+ Sbjct: 76 EPVAYILGYRDFWTLRLTVTPDVLIPRPDSETLIETAIAYF--REQAFLPENILDLGTGS 133 Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVI 168 GA+ LA L E KG+GVD S +A++IA+ NA G R + W ++ FD++ Sbjct: 134 GALLLAALDEWKDAKGLGVDASPEAIKIARLNADKCGALPRVEFKIGHWGRGIQQKFDLL 193 Query: 169 VSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228 + NPPYI + + +V ++P ++L G +GL YR I + L + G+ +EIG Sbjct: 194 LCNPPYIARDAM--MPADVLHYEPHLALFSGDEGLDDYREIIPEIPSLLTERGIACLEIG 251 Query: 229 YNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 ++Q +V I + L F D R +L R Sbjct: 252 FDQAENVSMIAKETGL-RSRIFYDLEQRPRCVLLSR 286 >gi|299769518|ref|YP_003731544.1| methylase of polypeptide chain release factor [Acinetobacter sp. DR1] gi|298699606|gb|ADI90171.1| methylase of polypeptide chain release factor [Acinetobacter sp. DR1] Length = 271 Score = 127 bits (319), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 77/216 (35%), Positives = 113/216 (52%), Gaps = 10/216 (4%) Query: 49 ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108 E + + G + F+ + L ++SDT PRP+TE+LV++ L +LP + I+DLGTGT Sbjct: 63 EPLAYVTGSQPFWTLDLKVTSDTLVPRPDTEILVETVLNLTLP-----NTANIVDLGTGT 117 Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDV 167 GA+ LAL E P + DI LE+AK NA+ + + +R WF ++E FD+ Sbjct: 118 GAIALALASERPDWFVTATDIYAPTLEVAKENALAHNL-QRVKFACGAWFEALEPQKFDL 176 Query: 168 IVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227 IVSNPPYI+ + ++ +PR +L GL+ I L G ++E Sbjct: 177 IVSNPPYIDP---EDEHMQALATEPRRALVADHQGLADIEIIIAQGKNWLKPQGWIALEH 233 Query: 228 GYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFC 263 GY+Q V IF + +DYG NDRV L C Sbjct: 234 GYDQGQAVRNIFAEHGFSEIKTIQDYGQNDRVTLAC 269 >gi|320538899|ref|ZP_08038575.1| N5-glutamine methyltransferase, modifies release factors RF-1 and RF-2 [Serratia symbiotica str. Tucson] gi|320031059|gb|EFW13062.1| N5-glutamine methyltransferase, modifies release factors RF-1 and RF-2 [Serratia symbiotica str. Tucson] Length = 282 Score = 127 bits (319), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 88/258 (34%), Positives = 133/258 (51%), Gaps = 8/258 (3%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 RD+ L VTG + ++ ++ L Q+ L +VR + E + ++G R+F+++ Sbjct: 22 RDAEILLGFVTGRARTFLLAFDETRLTPHQQQQLEALLVRREQGEPVAYLVGEREFWSLP 81 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L++S T PRP++E LV A +L R+ ILDLGTGTGA+ LAL E P Sbjct: 82 LSVSPATLIPRPDSECLV----ALALERLPIASC-HILDLGTGTGAIALALASERPDCTV 136 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCL 183 +GVD+ AL +A+ NA +S LQ +WFSS+ F +I SNPPYI++ Sbjct: 137 IGVDVQPDALALAQHNARKLTISN-VQFLQGNWFSSLAPQHFALIASNPPYIDADDAHLT 195 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 +VR F+P +L GL+ I +HL G +E G+ Q V + + Sbjct: 196 QGDVR-FEPASALVAAQQGLADLDAIVRQAPQHLQPQGWLLLEHGWQQGRSVRALMLAAG 254 Query: 244 LFLVNAFKDYGGNDRVLL 261 V ++DYG N+RV L Sbjct: 255 FMAVATYRDYGNNERVTL 272 >gi|319939133|ref|ZP_08013497.1| protoporphyrinogen oxidase [Streptococcus anginosus 1_2_62CV] gi|319812183|gb|EFW08449.1| protoporphyrinogen oxidase [Streptococcus anginosus 1_2_62CV] Length = 276 Score = 127 bits (319), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 76/217 (35%), Positives = 118/217 (54%), Gaps = 8/217 (3%) Query: 46 LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLG 105 L H I+G +F+ + PRPETE LV+ L+ + + +++LD+G Sbjct: 63 LVHRPAQYIIGNAEFHGHSFKVDERVLIPRPETEELVNLILSEN-----QNSSLKVLDIG 117 Query: 106 TGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF 165 TG+GA+ L+L E ++ DIS AL++A+ NA V+ D +QSD F ++ G + Sbjct: 118 TGSGAIALSLAAERANWQVTASDISQDALDLAQENAEAIDVA--IDFVQSDCFQAITGKY 175 Query: 166 DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225 D+IVSNPPYI + +GL V +P ++L DG + YR IA+ +HL + G + Sbjct: 176 DIIVSNPPYISETDREEVGLNVLASEPHLALFAEEDGYAVYRKIAENAQKHLTEKGKIYL 235 Query: 226 EIGYNQKVDVVRIFESR-KLFLVNAFKDYGGNDRVLL 261 EIGY Q V +IFES + +D G DR+++ Sbjct: 236 EIGYKQGEHVKKIFESAFPKMRIRILQDQFGKDRMVV 272 >gi|297183484|gb|ADI19615.1| methylase of polypeptide chain release factors [uncultured SAR11 cluster bacterium HF0770_37D02] Length = 282 Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 80/256 (31%), Positives = 130/256 (50%), Gaps = 5/256 (1%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L + G S ++V+ + + +AI R +K E I I G ++F++ Sbjct: 25 DAEIILSDIMGTSKEFLMVNNQINISKKTIKKYNSAIKRRIKKEPIAYITGKKEFWSQDF 84 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 ++ T PRPETELL+ + F K + +LD+GTG+G + L++LKE F G Sbjct: 85 AVNQATLVPRPETELLIYWVINFF-----KNRKINVLDIGTGSGCILLSILKELNFSTGT 139 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185 G+DIS KA++ A+ N+ V R D G +D+IVSNPPYI S + L Sbjct: 140 GIDISAKAIKTARVNSKNLNVVYRSKFKVFDLSKFNIGKYDLIVSNPPYIPSKDIKNLSK 199 Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245 ++ + +P ++L GG DGL + + + L ++GL ++EIGY Q V I + Sbjct: 200 DIINHEPLVALKGGFDGLDLIKKVIYKSNYLLKRNGLLAIEIGYRQYQKVSSILKKHGFR 259 Query: 246 LVNAFKDYGGNDRVLL 261 + D+ N R ++ Sbjct: 260 EIRKEYDFNHNVRCII 275 >gi|293609439|ref|ZP_06691741.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292827891|gb|EFF86254.1| conserved hypothetical protein [Acinetobacter sp. SH024] Length = 271 Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 77/216 (35%), Positives = 114/216 (52%), Gaps = 10/216 (4%) Query: 49 ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108 E + + G + F+ + L ++SDT PRP+TE+LV++ L +LP + I+DLGTGT Sbjct: 63 EPLAYVTGSQPFWTLDLKVTSDTLVPRPDTEVLVETVLNLNLP-----NTANIVDLGTGT 117 Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDV 167 GA+ LAL E P ++ +DI LE+AK NA + + +R WF ++E FD+ Sbjct: 118 GAIALALASERPDWQVTAIDIYAPTLEVAKENAQAHDL-QRVKFACGAWFDALEPQKFDL 176 Query: 168 IVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227 IVSNPPYI+ + ++ +PR +L GL+ I L G ++E Sbjct: 177 IVSNPPYIDP---EDEHMQALATEPRRALVADHQGLADIEIIIAQGKNWLKPQGWIALEH 233 Query: 228 GYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFC 263 GY+Q V IF + +DYG NDRV L C Sbjct: 234 GYDQGQAVRDIFTEHGFSEIKTIQDYGQNDRVTLAC 269 >gi|306833420|ref|ZP_07466547.1| protein-(glutamine-N5) methyltransferase [Streptococcus bovis ATCC 700338] gi|304424190|gb|EFM27329.1| protein-(glutamine-N5) methyltransferase [Streptococcus bovis ATCC 700338] Length = 276 Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 79/244 (32%), Positives = 127/244 (52%), Gaps = 14/244 (5%) Query: 23 IVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLV 82 I+ + + ++ + L +V+ H S I G F ++ L++ PRPETE LV Sbjct: 40 ILHQNQAITEKDQMLLEQIMVQLTAHRSPQYITGKAYFRDLELSVDERVLIPRPETEELV 99 Query: 83 DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142 D L + R +R+LD+GTG+GA+ ++L P ++ DIS AL++ K NA+ Sbjct: 100 DLVL-----KENSRADLRVLDIGTGSGAIAISLKAARPNWQVTASDISADALQLVKENAL 154 Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202 N V +QSD FS + FD+I+SNPPYI D +G+ V +P ++L +G Sbjct: 155 KNQVE--LTLIQSDVFSQITERFDMIISNPPYIAYDDEDEVGINVLASEPHLALFADENG 212 Query: 203 LSHYRTIADGVSRHLNKDGLCSVEIGYNQ----KVDVVRIFESRKLFLVNAFKDYGGNDR 258 + YR I + S HL ++G EIGY Q + + + F +++ V KD G DR Sbjct: 213 FAIYRQIIENASEHLTENGKLYFEIGYKQGEGLRALLSKHFPAKR---VRVIKDMFGKDR 269 Query: 259 VLLF 262 +++ Sbjct: 270 MVVM 273 >gi|88704042|ref|ZP_01101757.1| protoporphyrinogen oxidase [Congregibacter litoralis KT71] gi|88701869|gb|EAQ98973.1| protoporphyrinogen oxidase [Congregibacter litoralis KT71] Length = 280 Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 85/259 (32%), Positives = 133/259 (51%), Gaps = 8/259 (3%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 +A R++ LC ++ PD+ ++ + + + + +LG R+F+ Sbjct: 18 EAQREAQVLLCAALKKPRSYLVAWPDAEVEASAAEHYRHLLAQRASGIPVAYLLGEREFW 77 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 ++ L ++ T PRP+TELLV+ AL L +LDLGTG+GA+ LAL E P Sbjct: 78 SLTLRVNDATLIPRPDTELLVEQALKLDL-----SPGASVLDLGTGSGAIALALASERPR 132 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIV 180 ++ GV+ S +ALEIA++N G+ + +SDWF++V G FD+IVSNPPYI Sbjct: 133 WQITGVEHSPEALEIARTNGKRLGLKD-VAFHRSDWFTAVRGQRFDLIVSNPPYIAESDG 191 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 ++R F+PR +L G DGL R I L G +E G+ Q V + Sbjct: 192 HLSSGDLR-FEPRSALVSGADGLDDIRHIIAEAPTWLEPRGRLLLEHGFEQGSTVRALLS 250 Query: 241 SRKLFLVNAFKDYGGNDRV 259 +R V + +D G++RV Sbjct: 251 TRGFTAVASAEDLAGHERV 269 >gi|170768219|ref|ZP_02902672.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia albertii TW07627] gi|170122985|gb|EDS91916.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia albertii TW07627] Length = 277 Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 96/258 (37%), Positives = 131/258 (50%), Gaps = 8/258 (3%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 RD+ L VTG ++ ++ L D QR L + R E + + G R+F+++R Sbjct: 22 RDAEILLEHVTGKGRTWILAFGETQLTDAQREQLDVLLARRRVGEPVAHLTGVREFWSLR 81 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L +SS T PRP+TE LV+ ALA LP RILDLGTGTGA+ LAL E Sbjct: 82 LFVSSATLIPRPDTECLVEQALA-RLP----EQPCRILDLGTGTGAIALALASERTDCDI 136 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183 VD A+E+AK NA + + LQSDWFS++ G F +IVSNPPYI+ Sbjct: 137 TAVDRMPDAVELAKRNARHLAI-KNIHILQSDWFSALVGQQFAMIVSNPPYIDEQDPHLQ 195 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 +VR F+P +L G++ I + L G +E G+ Q V + F Sbjct: 196 QGDVR-FEPLSALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFIRAG 254 Query: 244 LFLVNAFKDYGGNDRVLL 261 V +DYGGN+RV L Sbjct: 255 YCEVETCRDYGGNERVTL 272 >gi|51891212|ref|YP_073903.1| putative protoporphyrinogen oxidase [Symbiobacterium thermophilum IAM 14863] gi|51854901|dbj|BAD39059.1| putative protoporphyrinogen oxidase [Symbiobacterium thermophilum IAM 14863] Length = 305 Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 78/217 (35%), Positives = 114/217 (52%), Gaps = 4/217 (1%) Query: 49 ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALA-FSLPRIEKRDVVRILDLGTG 107 E + ILG +F + ++ PR +T LV+ A+A + E R V+R+ D+GTG Sbjct: 84 EPLQYILGTEEFMGLTFRVTPAVLIPRLDTAALVEQAVARLTGGAAEARGVLRVADIGTG 143 Query: 108 TGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GL 164 +GA+ +A+ P + V VD+S +AL +A NA NGV++R Q D + + G Sbjct: 144 SGAIAVAVAHLLPHAQVVAVDLSPEALAVAAENARLNGVADRVRFRQGDLLAPLAEEGGR 203 Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224 F I+SNPPYI + L EVRD++PR++L G DGL+ YR +A L G Sbjct: 204 FAAILSNPPYIREDEIAGLMPEVRDWEPRLALVAGDDGLAFYRRLAREAPAFLEPGGFLG 263 Query: 225 VEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 VE+G Q V +F L V +D G DR +L Sbjct: 264 VEVGIGQAPAVAALFREAGLKDVAVCRDTAGVDRAVL 300 >gi|324113972|gb|EGC07946.1| protein-(glutamine-N5) methyltransferase [Escherichia fergusonii B253] Length = 276 Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 93/258 (36%), Positives = 130/258 (50%), Gaps = 8/258 (3%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 RD+ L VTG ++ ++ L D Q L + R E I + G R+F+++ Sbjct: 22 RDAEILLEYVTGRGRTFILAFGETQLTDEQLQQLDALLARRRAGEPIAHLTGQREFWSLP 81 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L +S T PRP+TE LV+ AL LP RILDLGTGTGA+ LAL E P + Sbjct: 82 LFVSPATLIPRPDTECLVEQALE-RLP----EQPCRILDLGTGTGAIALALASERPDCEI 136 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183 VD A+ +A+ NA + + LQSDWFS++ G F +IVSNPPYI+ Sbjct: 137 TAVDRMPDAVALAQRNAQHLAI-KNIHILQSDWFSALAGQQFAMIVSNPPYIDEQDPHLQ 195 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 +VR F+P +L G G++ I + L K G +E G+ Q V + F Sbjct: 196 QGDVR-FEPLTALVAGDHGMADIVHIIEHSRAALAKGGYLLLEHGWQQGTAVRQAFIQAG 254 Query: 244 LFLVNAFKDYGGNDRVLL 261 V +DYGGN+R+ L Sbjct: 255 YSNVETCRDYGGNERITL 272 >gi|225568387|ref|ZP_03777412.1| hypothetical protein CLOHYLEM_04464 [Clostridium hylemonae DSM 15053] gi|225162615|gb|EEG75234.1| hypothetical protein CLOHYLEM_04464 [Clostridium hylemonae DSM 15053] Length = 303 Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 91/272 (33%), Positives = 132/272 (48%), Gaps = 27/272 (9%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLD-DRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 D+ L VTG++ P++ LD D++ + + I R + E + I G ++F Sbjct: 30 DAWYLLEYVTGITRAAYYAHPETELDADKEDAYFAH-IGRRARREPLQHITGEQEFMGYS 88 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES----- 119 +S PR +TE+LV+ AL P + RILD+ TG+G V +++LK Sbjct: 89 FRVSGHVLIPRQDTEILVEEALKVLAPGM------RILDMCTGSGCVLISILKAGRERLR 142 Query: 120 -PFFKGVGVDISCKALEIAKSNAV-----------TNGVSERFDTLQSDWFSSVEGLFDV 167 +G G DIS +A+ +A+ NA NG RF T D F E +D+ Sbjct: 143 MERLEGTGSDISPEAVAVAEYNAARLLGRTETGRGNNGCCARFCT--GDLFEKAEERYDL 200 Query: 168 IVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227 IVSNPPYI + + L EVR DP I+LDG DGL YR I + ++ + G EI Sbjct: 201 IVSNPPYIRTEEIRKLQREVRLHDPYIALDGKKDGLYFYRRITAESAAYIAEGGYLMFEI 260 Query: 228 GYNQKVDVVRIFESRKLFLVNAFKDYGGNDRV 259 G++Q DV + E V KD G DR+ Sbjct: 261 GHDQAEDVCALLEQSGYADVFVKKDLAGLDRI 292 >gi|152970780|ref|YP_001335889.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|150955629|gb|ABR77659.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] Length = 283 Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 91/258 (35%), Positives = 132/258 (51%), Gaps = 8/258 (3%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 RD+ L VTG + ++ ++ L + L +VR + E I ++G R+F+++ Sbjct: 23 RDAEILLGYVTGRARTWILAFGETTLSADEAAKLEALLVRRQRGEPIAHLVGQREFWSLP 82 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L +S T PRP+TE LV+ ALA LP RILDLGTGTGA+ LAL E P + Sbjct: 83 LFVSPATLIPRPDTECLVEQALA-RLPTAP----CRILDLGTGTGAIALALASERPDCEV 137 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCL 183 VD+ A+ +A NA ++ QSDWFS++ G F IVSNPPYI++ Sbjct: 138 TAVDVMPDAVALALRNAEHLSIAN-VTISQSDWFSALAGQRFATIVSNPPYIDAADPHLA 196 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 +VR F+P +L G GL+ I ++L G +E G+ Q V +F Sbjct: 197 EGDVR-FEPLTALVAGDQGLADLAHIIREGRQYLQPGGWMLLEHGWTQGEAVRALFREAG 255 Query: 244 LFLVNAFKDYGGNDRVLL 261 V +DYG N+R+ L Sbjct: 256 YLDVATCRDYGDNERLTL 273 >gi|94264415|ref|ZP_01288205.1| Modification methylase HemK [delta proteobacterium MLMS-1] gi|93455172|gb|EAT05390.1| Modification methylase HemK [delta proteobacterium MLMS-1] Length = 319 Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 78/222 (35%), Positives = 122/222 (54%), Gaps = 8/222 (3%) Query: 49 ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIE--KRDVVRILDLGT 106 E + I+G +F+++ + PRPETELLV+ AL + P++ + ILDLGT Sbjct: 93 EPLAYIIGEWEFWSLPFAVDPGVLIPRPETELLVEEALRLA-PQLRGGAGRPLTILDLGT 151 Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EG 163 G+G + + L +E + + VD S AL +A+ N + V R L +DW S++ + Sbjct: 152 GSGILAVVLARELAPARVIAVDRSPAALAVARRNVCRHRVESRVSLLAADWLSALAAGKA 211 Query: 164 LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223 LFD++V+NPPY+E V + L EVRD++PR +LDGG G++ R +A + L G Sbjct: 212 LFDLVVANPPYVEDVALPGLEPEVRDYEPRQALDGGAAGMAQIRRLAAELPPFLRPGGGL 271 Query: 224 SVEIGYNQKVDVVRIFESRKLFL-VNAFKDYGGNDRVLLFCR 264 +EIG++Q+ V ++ + V D G R LL CR Sbjct: 272 LMEIGWDQQGVVEQLLAPDNAWREVRILPDLAGLPR-LLCCR 312 >gi|120555271|ref|YP_959622.1| HemK family modification methylase [Marinobacter aquaeolei VT8] gi|120325120|gb|ABM19435.1| [protein release factor]-glutamine N5-methyltransferase [Marinobacter aquaeolei VT8] Length = 285 Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 85/259 (32%), Positives = 135/259 (52%), Gaps = 13/259 (5%) Query: 6 DSHSFLCRVTGLS--SHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63 D+ L +TGL+ S + + D ++ +RFF + + + +LG ++F+++ Sbjct: 29 DAELLLSHITGLTRTSFRAWPERDVPVEQAERFF--ELVGERASGQPVAYLLGEQEFWSL 86 Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 L +S T PRP TE +V++AL+ LP +LDLGTGTGA+ LAL E P ++ Sbjct: 87 PLKVSPSTLIPRPGTECVVEAALSLELPA-----RASVLDLGTGTGAIALALASEQPGWQ 141 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDC 182 + D A+ +A+ N+ + G+ ++S WF + G FD+++SNPPYI + Sbjct: 142 VMASDRVEDAVALARENSQSLGLP--ITVVKSHWFDQIPAGTFDLLISNPPYIPASDRHL 199 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 +VR F+P +L G DGL R + LN +G +E GY+Q V +F Sbjct: 200 REGDVR-FEPESALVAGDDGLDDIRLLVTEGLNWLNPNGWMLLEHGYDQGSAVRDLFAKA 258 Query: 243 KLFLVNAFKDYGGNDRVLL 261 + KDYGGNDR+ L Sbjct: 259 GWRNMETRKDYGGNDRMTL 277 >gi|253688499|ref|YP_003017689.1| modification methylase, HemK family [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251755077|gb|ACT13153.1| modification methylase, HemK family [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 281 Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 86/258 (33%), Positives = 136/258 (52%), Gaps = 8/258 (3%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 RD+ L VTG ++ ++ L ++ L + R + E I ++G R+F+++ Sbjct: 22 RDAEILLGFVTGKRRTFLLAFGETALSAAEQQQLAELLARREQGEPIAYLIGEREFWSLP 81 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L++S T PRP+TE LV+ AL LP+ +LDLGTGTGA+ LAL E + Sbjct: 82 LSVSPATLIPRPDTECLVEQAL-LRLPQ----KPCAVLDLGTGTGAIALALASERRDCRV 136 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCL 183 GVD+ A+ +A NA G+ + L W+S ++ F +I SNPPYI++ + Sbjct: 137 TGVDVQPDAVALATKNAQQLGL-DNAHFLSGSWYSPLDQTRFALIASNPPYIDADDMHLS 195 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 +VR F+P +L +GL+ RTI + +L G +E G+ Q V ++ ++R Sbjct: 196 QGDVR-FEPASALIAADNGLADLRTIIESAPHYLAAGGWLLLEHGWQQADAVRQLLQARG 254 Query: 244 LFLVNAFKDYGGNDRVLL 261 + +DYGGNDRV L Sbjct: 255 FTQIETCQDYGGNDRVSL 272 >gi|330951101|gb|EGH51361.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Pseudomonas syringae Cit 7] Length = 277 Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 79/240 (32%), Positives = 122/240 (50%), Gaps = 7/240 (2%) Query: 26 PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85 P+ ++ + R K E + ILG + F+ + L ++ T PRPETE+LV++A Sbjct: 42 PERIVSTEAAVAFAGYMERRRKGEPVAYILGQQGFWKLDLEVAPHTLIPRPETEMLVEAA 101 Query: 86 LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145 L + ++LDLGTGTGA+ LAL E +K VD +A+ +A+ N Sbjct: 102 LEL----VPAFAPAQVLDLGTGTGAIALALANERQQWKVTAVDRVPEAVALAERNRQRLQ 157 Query: 146 VSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204 ++ + +S WFS ++G FD+I+SNPPYI +VR F+P +L G DGL Sbjct: 158 LNNA-EVFESHWFSGLQGRQFDLIISNPPYISDADPHLSAGDVR-FEPSSALVAGSDGLD 215 Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 RTI + HLN DG +E GY+Q V + + +D G ++R+ C+ Sbjct: 216 DLRTIIEQAPAHLNADGWLLLEHGYDQGPAVRELLIREGFERIQTRRDLGEHERITFGCK 275 >gi|209516554|ref|ZP_03265408.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Burkholderia sp. H160] gi|209502995|gb|EEA02997.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Burkholderia sp. H160] Length = 295 Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 91/260 (35%), Positives = 131/260 (50%), Gaps = 19/260 (7%) Query: 10 FLCRVTGLSSHQVIVDPDS--VLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67 L V G Q+I + +L D +R+ A R + E + +++G R+F+ + + Sbjct: 35 LLTHVLGWRRTQLITRGEEPLLLADVERYRALEA--RRVAGEPVAQLVGAREFFGLEFEV 92 Query: 68 SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 + PRPETELLV++ALA IE R R+LDLGTGTGA+ +A+ P + + Sbjct: 93 TPHVLIPRPETELLVETALAA----IEHRSRPRVLDLGTGTGAIAVAIASMRPDAQVWAL 148 Query: 128 DISCKALEIAKSN------AVTNGVSERFDTLQSDWFSSVEGL--FDVIVSNPPYIESVI 179 D S AL +A N A G + F L SDW+ S++ FD IVSNPPYI S Sbjct: 149 DRSADALVVAARNGARLLDAKRPGGAVAF--LHSDWYGSLDAALRFDAIVSNPPYIASGD 206 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 ++R F+PR +L DGLS R I G L DG +E GY+Q V + Sbjct: 207 PHLSEGDLR-FEPRSALTDEADGLSAIRAIVAGAPERLATDGALWIEHGYDQAEAVRALL 265 Query: 240 ESRKLFLVNAFKDYGGNDRV 259 +R V + +D G +R+ Sbjct: 266 SARGFAEVRSERDLAGIERI 285 >gi|302186443|ref|ZP_07263116.1| modification methylase HemK [Pseudomonas syringae pv. syringae 642] Length = 277 Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 79/240 (32%), Positives = 123/240 (51%), Gaps = 7/240 (2%) Query: 26 PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85 P+ ++ + R K E + ILG + F+ + L ++ T PRPETE+LV++A Sbjct: 42 PERIVSTEAAVAFAGYMERRRKGEPVAYILGQQGFWKLDLEVAPHTLIPRPETEMLVEAA 101 Query: 86 LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145 L + ++LDLGTGTGA+ LAL E +K VD +A+ +A+ N Sbjct: 102 LEL----VPAFASAQLLDLGTGTGAIALALANERQQWKVTAVDRVPEAVALAERNRKRLQ 157 Query: 146 VSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204 ++ + +S WFS ++G FD+I+SNPPYI +VR F+P +L G DGL Sbjct: 158 LNNA-EVFESHWFSGLQGRQFDLIISNPPYISDADPHLSAGDVR-FEPSSALVAGSDGLD 215 Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 RTI + HLN DG +E GY+Q V + + + +D G ++R+ C+ Sbjct: 216 DLRTIIEQAPAHLNADGWLLLEHGYDQGPAVRELLIRQGFERIQTRRDLGEHERITFGCK 275 >gi|262279541|ref|ZP_06057326.1| methyl transferase [Acinetobacter calcoaceticus RUH2202] gi|262259892|gb|EEY78625.1| methyl transferase [Acinetobacter calcoaceticus RUH2202] Length = 270 Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 80/217 (36%), Positives = 115/217 (52%), Gaps = 16/217 (7%) Query: 49 ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108 E + + G + F+ + L ++SDT PRP+TE+LV++ L+ +LP+ I+DLGTGT Sbjct: 63 EPLAYVTGSQPFWTLDLKVTSDTLVPRPDTEVLVETVLSLNLPK-----NANIVDLGTGT 117 Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEG-LFD 166 GA+ LAL E P ++ DI LE+AK NA T+G+ + +F WF +++ FD Sbjct: 118 GAIALALASEHPDWQVTATDIYAPTLEVAKENAQTHGLQQVKFAC--GAWFDALDKQQFD 175 Query: 167 VIVSNPPYI--ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224 +IVSNPPYI E + L E PR +L GL+ I L G + Sbjct: 176 LIVSNPPYIDPEDEHMQALATE-----PRRALVADHKGLADIEIIIAQGKNWLKPQGWIA 230 Query: 225 VEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 +E GY+Q V IF + +DYG NDRV L Sbjct: 231 LEHGYDQGHAVRNIFAEHGFSQIKTIQDYGQNDRVTL 267 >gi|291560727|emb|CBL39527.1| protein-(glutamine-N5) methyltransferase, release factor-specific [butyrate-producing bacterium SSC/2] Length = 283 Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 85/241 (35%), Positives = 128/241 (53%), Gaps = 10/241 (4%) Query: 27 DSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL 86 D + D I + +H + ILG ++F ++ D PR +TE +++ L Sbjct: 47 DEINDKEAEERYKELIQKRKEHVPLQYILGTQEFMGYTFKVTPDVLIPRADTETVLEEVL 106 Query: 87 AFSLPRIEKRDVVRILDLGTGTG--AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN 144 L + +K D ILD+ TG+G A+ LAL+ + VG DIS KAL+IAK+N Sbjct: 107 D-QLKQSKKPDT--ILDICTGSGCIAISLALILKPEVC--VGTDISEKALKIAKANGENL 161 Query: 145 GVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204 +F +QSD F +V G +D+I+SNPPYI + L EV+D++P ++LDG DGL Sbjct: 162 APMVKF--IQSDLFENVTGSYDLIISNPPYITTEECGKLMPEVKDYEPMLALDGKEDGLY 219 Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL-FC 263 Y+ I +LN G+ + EIGY+Q V + E++ V KD G DR++ F Sbjct: 220 FYKKIIKEAKNYLNPQGMLAFEIGYDQGEAVKNLMEAQDFACVEIKKDLAGLDRLVFGFA 279 Query: 264 R 264 R Sbjct: 280 R 280 >gi|254429562|ref|ZP_05043269.1| methyltransferase, HemK family [Alcanivorax sp. DG881] gi|196195731|gb|EDX90690.1| methyltransferase, HemK family [Alcanivorax sp. DG881] Length = 275 Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 85/257 (33%), Positives = 125/257 (48%), Gaps = 8/257 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A D+ LC V G + P+ L Q+ T+ + + E + ++G R+F+ Sbjct: 20 AALDAELLLCHVLGKPRSYLFTWPERELSTAQQADFTSLLGHRVAGEPVAHLIGEREFFG 79 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 +++DT PRP+TE LV+ AL+ +P R++DLGTGTGA+ ++L P + Sbjct: 80 HLFRVTADTLIPRPDTETLVEKALSLDVPA-----EARVVDLGTGTGAIGVSLALARPDW 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182 VD+S AL++A NA G + LQ W S G FD+IVSNPPYIE Sbjct: 135 HVTLVDLSEAALQVAADNAHRLGAA--VTCLQGSWLSPCPGPFDLIVSNPPYIEESDHHL 192 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 +VR F+PR +L +GL+ I + L G +E G+ Q V + Sbjct: 193 DEGDVR-FEPRSALVAPNNGLADLAAITQQAAGKLVAGGWLLLEHGFEQGEAVRTLLTQA 251 Query: 243 KLFLVNAFKDYGGNDRV 259 V +D GGNDRV Sbjct: 252 GFVQVGTAQDLGGNDRV 268 >gi|94271211|ref|ZP_01291906.1| Modification methylase HemK [delta proteobacterium MLMS-1] gi|93450531|gb|EAT01681.1| Modification methylase HemK [delta proteobacterium MLMS-1] Length = 325 Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 78/222 (35%), Positives = 122/222 (54%), Gaps = 8/222 (3%) Query: 49 ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIE--KRDVVRILDLGT 106 E + I+G +F+++ + PRPETELLV+ AL + P++ + ILDLGT Sbjct: 93 EPLAYIIGEWEFWSLPFAVDPGVLIPRPETELLVEEALRLA-PQLRGGAGRPLTILDLGT 151 Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EG 163 G+G + + L +E + + VD S AL +A+ N + V R L +DW S++ + Sbjct: 152 GSGILAVVLARELAPARVIAVDRSPAALAVARRNVCRHRVESRVSLLAADWLSALAAGKA 211 Query: 164 LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223 LFD++V+NPPY+E V + L EVRD++PR +LDGG G++ R +A + L G Sbjct: 212 LFDLVVANPPYVEDVALPGLEPEVRDYEPRQALDGGAAGMAQIRRLAAELPPFLRPGGGL 271 Query: 224 SVEIGYNQKVDVVRIFESRKLFL-VNAFKDYGGNDRVLLFCR 264 +EIG++Q+ V ++ + V D G R LL CR Sbjct: 272 LMEIGWDQQGVVEQLLAPDNAWREVRILPDLAGLPR-LLRCR 312 >gi|294650078|ref|ZP_06727462.1| protein-glutamine N-methyltransferase [Acinetobacter haemolyticus ATCC 19194] gi|292824029|gb|EFF82848.1| protein-glutamine N-methyltransferase [Acinetobacter haemolyticus ATCC 19194] Length = 273 Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 84/264 (31%), Positives = 137/264 (51%), Gaps = 15/264 (5%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 +++ L + G++S ++ + + L + Q + + R + E + + G + F+ + Sbjct: 19 QEAAWLLEHILGVNSLELKLRLEQELTEIQEQAYLDGLARIEQGEPLAYVTGSQPFWTLD 78 Query: 65 LTLSSDTFEPRPETELLVDSALAFSL-PRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 L ++ DT PRP+TE+LV++ L SL P+ I+DLGTGTGA+ LAL E P + Sbjct: 79 LKVTHDTLVPRPDTEILVETVLKLSLDPQ------ANIVDLGTGTGAIALALASERPQWS 132 Query: 124 GVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIV 180 DI L++A+ NA+ +G+S +F WF ++ + FD+IVSNPPYI+ Sbjct: 133 VTATDIYQPTLDVAQDNALKHGLSLVKFAC--GAWFEALVEQQQFDLIVSNPPYIDP--- 187 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 D + ++ +P +L GL+ I L G ++E GY+Q+ V IFE Sbjct: 188 DDVHMQKLKSEPERALIAANHGLADIEIIIAQGKAWLKAKGWIALEHGYDQRQAVREIFE 247 Query: 241 SRKLFLVNAFKDYGGNDRVLLFCR 264 + KDYGGNDRV L + Sbjct: 248 LHGFEQIQTIKDYGGNDRVSLAQK 271 >gi|20806671|ref|NP_621842.1| rRNA or tRNA methylase [Thermoanaerobacter tengcongensis MB4] gi|20515121|gb|AAM23446.1| predicted rRNA or tRNA methylase [Thermoanaerobacter tengcongensis MB4] Length = 285 Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 85/243 (34%), Positives = 130/243 (53%), Gaps = 9/243 (3%) Query: 21 QVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETEL 80 ++ + D VL + + I + I+ + F + PRPETE+ Sbjct: 45 KLAIKRDEVLKEEELERFLKYIEKRKSRIPYQYIVKKQHFMGFEFYVDERVLIPRPETEI 104 Query: 81 LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140 LV+ AL R++ D+ ILD+GTG+GA+ +++ K P K VD+S +ALE+AK N Sbjct: 105 LVEEALK----RMKSGDL--ILDIGTGSGAIAISIAKLFPDCKVYAVDVSEEALEVAKYN 158 Query: 141 AVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG 198 A GV+E+ ++SD FS++ FD+IVSNPPYI+ ++ L EV+ +P ++LDG Sbjct: 159 AEKLGVAEKIIFIKSDIFSNIPQDVKFDLIVSNPPYIKKAELENLQEEVKK-EPILALDG 217 Query: 199 GIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258 G DGL Y+ I +L K G EIGY Q+ +V +IF + KD DR Sbjct: 218 GEDGLFFYKRIIPDCKFYLKKGGRGLFEIGYGQREEVEKIFLENGFDEIEVIKDLAHIDR 277 Query: 259 VLL 261 V++ Sbjct: 278 VII 280 >gi|325263709|ref|ZP_08130442.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Clostridium sp. D5] gi|324030747|gb|EGB92029.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Clostridium sp. D5] Length = 306 Score = 126 bits (317), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 89/278 (32%), Positives = 133/278 (47%), Gaps = 25/278 (8%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L V+G+ PD +L + Q T+ I R + + + G ++F + Sbjct: 25 DAWYLLEYVSGVGRAMYYAMPDKLLTEAQEKQYTDYIERRAQRIPLQHLTGTQEFMGLEF 84 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEK------------------RDVVRILDLGTG 107 ++ PR +TE+LV+ AL + +E R R+LD+ TG Sbjct: 85 QVNEHVLIPRQDTEVLVEEALGAAEKYMEHMSCSFAGNRGAGDGCEDARKTFRLLDMCTG 144 Query: 108 TGAVCLALL-----KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162 +G + L++L + KG+GVD+S KALE A++NA + + D L SD F VE Sbjct: 145 SGCILLSMLHYISKNKQMQSKGLGVDVSEKALETARANA--DALHIDADFLHSDLFEQVE 202 Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL 222 G F +IVSNPPYI + +++ L EV+ DP ++LDG DGL YR I L G Sbjct: 203 GSFQMIVSNPPYIRTDVIETLQEEVKGHDPVLALDGRADGLYFYRKIVREAKHCLVSGGS 262 Query: 223 CSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 EIG +Q V + V+ KD G DRV+ Sbjct: 263 LLFEIGADQGEAVSAMMWEAGYSRVSVKKDLAGLDRVV 300 >gi|91792281|ref|YP_561932.1| HemK family modification methylase [Shewanella denitrificans OS217] gi|91714283|gb|ABE54209.1| modification methylase, HemK family [Shewanella denitrificans OS217] Length = 284 Score = 126 bits (317), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 82/238 (34%), Positives = 129/238 (54%), Gaps = 10/238 (4%) Query: 26 PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85 P+ L +Q N +++ + + I+G R+F+++ ++ T PRP+TE+LV++A Sbjct: 50 PEKALSVQQFRAFNNMVLKRQQGVPVAHIIGEREFWSLPFIVNESTLIPRPDTEILVETA 109 Query: 86 LAFSL-PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN 144 L +L P ++LDLGTGTGA+ L+L E P +K +D +A+E+AK+N N Sbjct: 110 LNLTLSPH------AKVLDLGTGTGAIALSLASERPDWKVTAIDKVDEAVELAKANR-QN 162 Query: 145 GVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203 + + LQSDWFS+V+ FD+IVSNPPYI++ + L L F+P+ +L G G Sbjct: 163 LNLPQVEILQSDWFSAVKDRDFDLIVSNPPYIDAED-EHLNLGDVRFEPQSALTAGEHGY 221 Query: 204 SHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 + IA+ HL G +E G+ Q + V V +D+G NDR L Sbjct: 222 ADLFHIAEHAREHLVHGGYLLLEHGFEQAIKVREKLIELGYQQVATVRDFGSNDRCTL 279 >gi|289678405|ref|ZP_06499295.1| modification methylase HemK [Pseudomonas syringae pv. syringae FF5] Length = 277 Score = 126 bits (317), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 78/240 (32%), Positives = 122/240 (50%), Gaps = 7/240 (2%) Query: 26 PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85 P+ ++ + R K E + ILG + F+ + L ++ T PRPETE+LV++A Sbjct: 42 PERIVSTEAAVAFAGYMERRRKGEPVAYILGQQGFWKLDLEVAPHTLIPRPETEMLVEAA 101 Query: 86 LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145 L + ++LDLGTGTGA+ LAL E +K VD +A+ +A+ N Sbjct: 102 LEL----VPAFAPAQVLDLGTGTGAIALALANERQQWKVTAVDRVPEAVALAERNRQRLQ 157 Query: 146 VSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204 ++ + +S WF ++G FD+I+SNPPYI +VR F+P +L G DGL Sbjct: 158 LNNA-EVFESHWFGGLQGRQFDLIISNPPYISDADPHLSAGDVR-FEPSSALVAGSDGLD 215 Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 RTI + HLN DG +E GY+Q V + + + +D G ++R+ C+ Sbjct: 216 DLRTIIEQAPAHLNADGWLLLEHGYDQGAAVRELLIRQGFERIQTRRDLGEHERITFGCK 275 >gi|218549097|ref|YP_002382888.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia fergusonii ATCC 35469] gi|218356638|emb|CAQ89264.1| N5-glutamine methyltransferase, modifies release factors RF-1 and RF-2 [Escherichia fergusonii ATCC 35469] gi|325497512|gb|EGC95371.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia fergusonii ECD227] Length = 276 Score = 126 bits (317), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 92/258 (35%), Positives = 130/258 (50%), Gaps = 8/258 (3%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 RD+ L VTG ++ ++ L D Q L + R E + + G R+F+++ Sbjct: 22 RDAEILLEYVTGRGRTFILAFGETQLTDEQLQQLDALLARRRAGEPVAHLTGQREFWSLP 81 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L +S T PRP+TE LV+ AL LP RILDLGTGTGA+ LAL E P + Sbjct: 82 LFVSPATLIPRPDTECLVEQALE-RLP----EQPCRILDLGTGTGAIALALASERPDCEI 136 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183 VD A+ +A+ NA + + LQSDWFS++ G F +IVSNPPYI+ Sbjct: 137 TAVDRMPDAVALAQRNAQHLAI-KNIHILQSDWFSALAGQQFAMIVSNPPYIDEQDPHLQ 195 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 +VR F+P +L G G++ I + L K G +E G+ Q V + F Sbjct: 196 QGDVR-FEPLTALVAGDHGMADIVHIIEHSRAALAKGGYLLLEHGWQQGAAVRQAFIQAG 254 Query: 244 LFLVNAFKDYGGNDRVLL 261 V +DYGGN+R+ L Sbjct: 255 YSNVETCRDYGGNERITL 272 >gi|213967223|ref|ZP_03395372.1| hemK protein [Pseudomonas syringae pv. tomato T1] gi|301381041|ref|ZP_07229459.1| hemK protein [Pseudomonas syringae pv. tomato Max13] gi|302060377|ref|ZP_07251918.1| hemK protein [Pseudomonas syringae pv. tomato K40] gi|302134867|ref|ZP_07260857.1| hemK protein [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213928065|gb|EEB61611.1| hemK protein [Pseudomonas syringae pv. tomato T1] gi|331018121|gb|EGH98177.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 277 Score = 126 bits (317), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 79/240 (32%), Positives = 120/240 (50%), Gaps = 7/240 (2%) Query: 26 PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85 P+ ++ + R E + ILG + F+ + L ++ T PRPETE+LV++A Sbjct: 42 PERIVSTEAAVAFAGYLQRRRTGEPVAYILGQQGFWKLDLEVAPHTLIPRPETEMLVEAA 101 Query: 86 LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145 L + ++LDLGTGTGA+ LAL + +K VD +A+ +A+ N Sbjct: 102 LEL----VPAFAPAQVLDLGTGTGAIALALANDRQQWKVTAVDRVPEAVALAERNRQRLQ 157 Query: 146 VSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204 + + L S WFS++EG FD+I+SNPPYI +VR F+P +L G DGL Sbjct: 158 L-DNAQVLNSHWFSALEGRQFDLIISNPPYIADADPHLSAGDVR-FEPSSALTAGADGLD 215 Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 RTI HLN DG +E GY+Q V + + +D G ++R+ C+ Sbjct: 216 DLRTIIADAQAHLNADGWLLLEHGYDQGPAVRELLTRHGFERIQTRRDLGEHERITFGCK 275 >gi|261409697|ref|YP_003245938.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Paenibacillus sp. Y412MC10] gi|261286160|gb|ACX68131.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Paenibacillus sp. Y412MC10] Length = 296 Score = 126 bits (316), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 85/267 (31%), Positives = 132/267 (49%), Gaps = 11/267 (4%) Query: 1 MQALRDSHSFLCRVTGLSS---HQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGW 57 M+ R++ L V GLS + + DP + +R L AI R + I+G Sbjct: 31 MEPQRNAQLLLEHVLGLSGTSYYMALTDP---FPEGRRLALEEAITRKAEGVPAQYIIGE 87 Query: 58 RDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALL 116 ++FY ++ PRPETELLV++ L + + D ++++D+GTG+GA+ + L Sbjct: 88 QEFYGRPFDVTPAVLIPRPETELLVEAVLKYGQELTPQPDGGLKVVDIGTGSGAIAITLA 147 Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYI 175 +S + DIS ALE+A NA G F Q + G+ D++VSNPPYI Sbjct: 148 LQSKGWDVFASDISPDALEVAARNAKKLGAQVEFR--QGNLLEPFAGMGPDILVSNPPYI 205 Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235 + ++ L EVRD++PR +LDGG DGL+ YR + + L + E+G Q DV Sbjct: 206 PAEDIEELQPEVRDYEPRTALDGGPDGLNPYRIMMAQLPFLSAPPRLIAFELGMGQAGDV 265 Query: 236 VRIFESRKLF-LVNAFKDYGGNDRVLL 261 + + + D G DR +L Sbjct: 266 AELLRKAGYWEEIVTVPDLAGIDRHVL 292 >gi|167038491|ref|YP_001666069.1| HemK family modification methylase [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|167038766|ref|YP_001661751.1| HemK family modification methylase [Thermoanaerobacter sp. X514] gi|256751360|ref|ZP_05492239.1| modification methylase, HemK family [Thermoanaerobacter ethanolicus CCSD1] gi|300913649|ref|ZP_07130966.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Thermoanaerobacter sp. X561] gi|307723336|ref|YP_003903087.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Thermoanaerobacter sp. X513] gi|320116887|ref|YP_004187046.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|166853006|gb|ABY91415.1| modification methylase, HemK family [Thermoanaerobacter sp. X514] gi|166857325|gb|ABY95733.1| modification methylase, HemK family [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|256749742|gb|EEU62767.1| modification methylase, HemK family [Thermoanaerobacter ethanolicus CCSD1] gi|300890334|gb|EFK85479.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Thermoanaerobacter sp. X561] gi|307580397|gb|ADN53796.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Thermoanaerobacter sp. X513] gi|319929978|gb|ADV80663.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Thermoanaerobacter brockii subsp. finnii Ako-1] Length = 279 Score = 126 bits (316), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 80/216 (37%), Positives = 121/216 (56%), Gaps = 9/216 (4%) Query: 48 HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTG 107 H I+ F + + + PRPETE+LV+ L R++K + ++D+GTG Sbjct: 66 HIPYQYIVKKHYFMGLEFFVDENVLIPRPETEILVEEVLK----RLKKGNT--LIDIGTG 119 Query: 108 TGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LF 165 +GA+ ++++K P VDIS KALE+AK NA + V ++ ++SD FS V F Sbjct: 120 SGAIAVSVVKYFPDCFVYAVDISRKALEVAKYNAKKHNVLDKIVFIESDVFSQVPKNIKF 179 Query: 166 DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225 D IVSNPPYI+ ++ L EV+ +P I+LDGG DGL Y+ I +G +LN +G Sbjct: 180 DFIVSNPPYIKRGELETLQEEVKK-EPIIALDGGEDGLFFYKKIIEGAPFYLNPEGAICF 238 Query: 226 EIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 E+GY+QK +V + + KD G DRV++ Sbjct: 239 EMGYDQKEEVTDLLTKGGFKNIEVIKDLSGIDRVVI 274 >gi|183598964|ref|ZP_02960457.1| hypothetical protein PROSTU_02408 [Providencia stuartii ATCC 25827] gi|188021180|gb|EDU59220.1| hypothetical protein PROSTU_02408 [Providencia stuartii ATCC 25827] Length = 281 Score = 126 bits (316), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 92/260 (35%), Positives = 133/260 (51%), Gaps = 8/260 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A RD+ L +TG S + ++ L + L + + R + E I I+G R+F++ Sbjct: 20 AKRDAEILLQHITGRSRTFIFAFAETELTQPEYEALESLLCRREQGEPIAYIIGEREFWS 79 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +S T PRP+TE LV+ ALA LP +ILDLGTGTGA+ LA+ E P Sbjct: 80 LPLFVSPATLIPRPDTECLVEQALA-RLP----AQRCQILDLGTGTGAIALAIASERPDS 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVD 181 +G+D + A+ +A+ N ++ LQSDWF+S+ FD+IVSNPPYI+ Sbjct: 135 VIIGIDFNLDAVSLAQRNQQRLALN-NVQFLQSDWFTSLSCQHFDMIVSNPPYIDGNDDH 193 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P +L GLS I +LN G VE G+ Q V +F+ Sbjct: 194 LQQGDVR-FEPLTALVADNHGLSDLDHIVSTSRSYLNPQGWLLVEHGWQQGAAVRELFKQ 252 Query: 242 RKLFLVNAFKDYGGNDRVLL 261 + DYGG DR+ L Sbjct: 253 YGYSNIETCLDYGGRDRISL 272 >gi|332993698|gb|AEF03753.1| peptide release factor-glutamine N5-methyltransferase [Alteromonas sp. SN2] Length = 288 Score = 126 bits (316), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 86/217 (39%), Positives = 118/217 (54%), Gaps = 13/217 (5%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALA------FSLPRIEKRDVVRILDL 104 + + G RDF+ +RL S T PRP+TE+LV+ L+ F+L +E + I DL Sbjct: 68 VAYLTGSRDFWTLRLATSPHTLIPRPDTEVLVEQTLSCIASAEFAL-EVEDNKLA-ICDL 125 Query: 105 GTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEG 163 GTGTGA+ LAL E P GVD+ +A+++A SNA N ++ +F QS WF ++ Sbjct: 126 GTGTGAIALALASELPTANITGVDLLHEAVQLATSNAALNSITNAQFK--QSSWFDNLAN 183 Query: 164 -LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL 222 F VIVSNPPYIE +VR F+P +L G DGL + I HL + GL Sbjct: 184 EKFHVIVSNPPYIEISSPFLQQGDVR-FEPASALTSGADGLDDIKHIIALAPAHLLEGGL 242 Query: 223 CSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRV 259 + E G++Q V + + V KDYGGNDRV Sbjct: 243 LAFEHGFDQAKAVGDLLNAHGFVNVCTEKDYGGNDRV 279 >gi|134294602|ref|YP_001118337.1| HemK family modification methylase [Burkholderia vietnamiensis G4] gi|134137759|gb|ABO53502.1| [protein release factor]-glutamine N5-methyltransferase [Burkholderia vietnamiensis G4] Length = 280 Score = 126 bits (316), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 85/260 (32%), Positives = 127/260 (48%), Gaps = 11/260 (4%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L G + Q+I D+ L+ R + E + +++G R+F+ Sbjct: 19 DARVLLSHALGWTRTQLITRGDAPLEPAAIARYRALEARRVAGEPVAQLVGMREFFGRPF 78 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 ++ D PRPETELLV++AL I+ R +LDLGTG+GA+ +++ E P + Sbjct: 79 DVTPDVLIPRPETELLVEAALDA----IDGRPHPAVLDLGTGSGAIAVSIAAERPDARVW 134 Query: 126 GVDISCKALEIAKSNAVTNGVSER----FDTLQSDWFSSVEGL--FDVIVSNPPYIESVI 179 +D S ALE+A+ NA + R LQSDW+++++ FD IVSNPPYI Sbjct: 135 ALDRSPAALEVAQRNAAKLLDARRPGGPLHWLQSDWYAALDPALAFDAIVSNPPYIAQHD 194 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 ++R F+PR +L DGLS RTI G HL G +E GY+Q V + Sbjct: 195 PHLEQGDLR-FEPRGALTDDADGLSAIRTIVAGAGAHLKPGGTLWIEHGYDQAEAVRALL 253 Query: 240 ESRKLFLVNAFKDYGGNDRV 259 S V + D +R Sbjct: 254 ASHGFVAVESLADLAAIERT 273 >gi|330887863|gb|EGH20524.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Pseudomonas syringae pv. mori str. 301020] Length = 277 Score = 126 bits (316), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 80/240 (33%), Positives = 121/240 (50%), Gaps = 7/240 (2%) Query: 26 PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85 P+ ++ T + R E + ILG + F+ + L ++ T PRPETE+LV++A Sbjct: 42 PERIVSTEAALAFTGYLQRRRTGEPVAYILGQQGFWKLDLEVAPHTLIPRPETEMLVEAA 101 Query: 86 LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145 L + ++LDLGTGTGA+ LAL E +K VD +A+ +A+ N Sbjct: 102 LEL----VPAFAPAKVLDLGTGTGAIALALANERQQWKVTAVDRVPEAVALAERNRQRLQ 157 Query: 146 VSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204 + + L S WFS++EG FD+I+SNPPYI +VR F+P +L G DGL Sbjct: 158 L-DNAQVLNSHWFSALEGQQFDLIISNPPYIADADPHLSAGDVR-FEPSSALTAGSDGLD 215 Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 RTI HL+ DG +E GY+Q V + + +D G ++R+ C+ Sbjct: 216 DLRTIIADAPVHLSADGWLLLEHGYDQGPAVRELLIRHGFERIQTRRDLGEHERITFGCK 275 >gi|238019081|ref|ZP_04599507.1| hypothetical protein VEIDISOL_00943 [Veillonella dispar ATCC 17748] gi|237864336|gb|EEP65626.1| hypothetical protein VEIDISOL_00943 [Veillonella dispar ATCC 17748] Length = 289 Score = 126 bits (316), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 80/218 (36%), Positives = 121/218 (55%), Gaps = 9/218 (4%) Query: 47 KHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGT 106 K + I+G +DF + ++ PRP+TE L++ L + P+ K VRILD+ T Sbjct: 71 KGHCVAAIIGEKDFMGLTFKVNDKVLIPRPDTETLIEHVLG-AYPKDSK---VRILDVCT 126 Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--- 163 G G + L+LL P GVG++IS AL +A+ N +++R L+SD FS+++G Sbjct: 127 GPGTILLSLLHYLPNACGVGLEISTDALTVAEENRERFNLNDRVQLLESDMFSALDGKAE 186 Query: 164 LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223 FD+IVSNPPYI + L +V + +P I+L GG DGL YR +A +L G Sbjct: 187 KFDLIVSNPPYIRTGDAKLLSQDVLN-EPHIALFGGEDGLEFYRILAKACGTYLKPQGRI 245 Query: 224 SVEIGYNQKVDVVRIF-ESRKLFLVNAFKDYGGNDRVL 260 + EIGY+Q +V + E+ + D GGN+RV+ Sbjct: 246 AFEIGYDQAEEVKSLLKEAGHYSNIQCIADLGGNNRVV 283 >gi|330967415|gb|EGH67675.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Pseudomonas syringae pv. actinidiae str. M302091] Length = 277 Score = 126 bits (316), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 80/240 (33%), Positives = 121/240 (50%), Gaps = 7/240 (2%) Query: 26 PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85 P+ ++ + R E + ILG + F+ + L ++ T PRPETE+LV++A Sbjct: 42 PERIVSTEAAVAFAGYLQRRRTGEPVAYILGQQGFWKLDLEVAPHTLIPRPETEMLVEAA 101 Query: 86 LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145 L + ++LDLGTGTGA+ LAL + +K VD +A+ +A+ N Sbjct: 102 LEL----VPAFAPAQVLDLGTGTGAIALALANDRQQWKVTAVDRVPEAVALAERNRQRLQ 157 Query: 146 VSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204 + + L S WFS++EG FD+I+SNPPYI +VR F+P +L G DGL Sbjct: 158 L-DNAQVLNSHWFSALEGRQFDLIISNPPYIADADPHLSAGDVR-FEPSSALTAGSDGLD 215 Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 RTI S HLN DG +E GY+Q V + + +D G ++R+ C+ Sbjct: 216 DLRTIIADASAHLNADGWLLLEHGYDQGPAVRELLIRHGFERIQTRRDLGEHERITFGCK 275 >gi|330873306|gb|EGH07455.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 277 Score = 126 bits (316), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 80/240 (33%), Positives = 121/240 (50%), Gaps = 7/240 (2%) Query: 26 PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85 P+ ++ + R E + ILG + F+ + L ++S T PRPETE+LV++A Sbjct: 42 PERIVSTEAAVAFAGYLQRRRTGEPVAYILGQQGFWKLDLEVASHTLIPRPETEMLVEAA 101 Query: 86 LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145 L + ++LDLGTGTGA+ LAL + +K VD +A+ +A+ N Sbjct: 102 LEL----VPAFAPAQVLDLGTGTGAIALALANDRQQWKVTAVDRVPEAVALAERNRQRLQ 157 Query: 146 VSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204 + + L S WFS++EG FD+I+SNPPYI +VR F+P +L G DGL Sbjct: 158 L-DNAQVLNSHWFSALEGRQFDLIISNPPYIADADPHLSAGDVR-FEPSSALTAGSDGLD 215 Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 RTI HLN DG +E GY+Q V + + +D G ++R+ C+ Sbjct: 216 DLRTIIADAPAHLNADGWLLLEHGYDQGPAVRELLIRHGFERIQTRRDLGEHERITFGCK 275 >gi|254246466|ref|ZP_04939787.1| Methylase [Burkholderia cenocepacia PC184] gi|124871242|gb|EAY62958.1| Methylase [Burkholderia cenocepacia PC184] Length = 280 Score = 126 bits (316), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 88/262 (33%), Positives = 131/262 (50%), Gaps = 15/262 (5%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDR--QRFFLTNAIVRSLKHESIHRILGWRDFYNV 63 D+ L G + Q+I D+ LDD +R+ A R + E + +++G R+F+ Sbjct: 19 DARVLLAHALGWTRTQLITRGDAPLDDAAVERYRALEA--RRVAGEPVAQLVGMREFFGR 76 Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 ++ D PRPETELLV++AL I+ +LDLGTG+GA+ +++ E P + Sbjct: 77 PFDVTPDVLIPRPETELLVEAALDA----IDGLPHAAVLDLGTGSGAIAVSIAAERPDAR 132 Query: 124 GVGVDISCKALEIAKSNAVTNGVSER----FDTLQSDWFSSVEGL--FDVIVSNPPYIES 177 +D S AL +A+ NA + R LQSDW+++++ FD IVSNPPYI Sbjct: 133 VWALDRSPAALAVAQRNADKLLDARRPGGPLHWLQSDWYAALDPALGFDAIVSNPPYIAQ 192 Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237 ++R F+PR +L G DGLS RTI G +L G +E GY+Q V Sbjct: 193 HDPHLAQGDLR-FEPRGALTDGADGLSAIRTIVAGAGAYLKPGGTLWIEHGYDQAEAVRA 251 Query: 238 IFESRKLFLVNAFKDYGGNDRV 259 I S V + D +R Sbjct: 252 ILASHGFVAVESLADLTAIERT 273 >gi|28868325|ref|NP_790944.1| hemK protein [Pseudomonas syringae pv. tomato str. DC3000] gi|28851562|gb|AAO54639.1| hemK protein [Pseudomonas syringae pv. tomato str. DC3000] Length = 277 Score = 126 bits (316), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 79/240 (32%), Positives = 120/240 (50%), Gaps = 7/240 (2%) Query: 26 PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85 P+ ++ + R E + ILG + F+ + L ++ T PRPETE+LV++A Sbjct: 42 PERIVSTEAAVAFAGYLQRRRTGEPVAYILGQQGFWKLDLEVAPHTLIPRPETEMLVEAA 101 Query: 86 LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145 L + ++LDLGTGTGA+ LAL + +K VD +A+ +A+ N Sbjct: 102 LEL----VPAFAPAQVLDLGTGTGAIALALANDRQQWKVTAVDRVPEAVALAERNRQRLQ 157 Query: 146 VSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204 + + L S WFS++EG FD+I+SNPPYI +VR F+P +L G DGL Sbjct: 158 L-DYAQVLNSHWFSALEGRQFDLIISNPPYIADADPHLSAGDVR-FEPSSALTAGADGLD 215 Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 RTI HLN DG +E GY+Q V + + +D G ++R+ C+ Sbjct: 216 DLRTIIADAQAHLNADGWLLLEHGYDQGPAVRELLTRHGFERIQTRRDLGEHERITFGCK 275 >gi|121727186|ref|ZP_01680353.1| hemK protein [Vibrio cholerae V52] gi|147674049|ref|YP_001217694.1| hemK protein [Vibrio cholerae O395] gi|262167527|ref|ZP_06035233.1| Polypeptide chain release factor methylase [Vibrio cholerae RC27] gi|121630431|gb|EAX62824.1| hemK protein [Vibrio cholerae V52] gi|146315932|gb|ABQ20471.1| hemK protein [Vibrio cholerae O395] gi|227014074|gb|ACP10284.1| hemK protein [Vibrio cholerae O395] gi|262024099|gb|EEY42794.1| Polypeptide chain release factor methylase [Vibrio cholerae RC27] Length = 286 Score = 126 bits (316), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 90/260 (34%), Positives = 129/260 (49%), Gaps = 13/260 (5%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ LC V ++ PD +L+ L + R E + ILG R+F+++ L Sbjct: 27 DAAVLLCHVLAKPRSYLLTWPDKILEKPTLASLELLLARRRAGEPMAYILGEREFWSLPL 86 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV--RILDLGTGTGAVCLALLKESPFFK 123 +S T PRP+TE LV+ AL +K ++ +LDLGTGTGA+ LAL E P + Sbjct: 87 KVSPSTLIPRPDTERLVELAL-------DKAALIDGELLDLGTGTGAIALALASELPTRQ 139 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIESVIVD 181 G+D+ +A E+A+ NA + Q WFS + F +IVSNPPYIE Sbjct: 140 VTGIDLRPEAAELARENATRLAI-HNAQFFQGSWFSPLADGTKFALIVSNPPYIEENDPH 198 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P+ +L +GL+ R I+ R L DG E GY+Q V V I Sbjct: 199 LSLGDVR-FEPKSALVAAENGLADIRHISTHAPRFLLDDGWLLFEHGYDQGVAVRTIMSD 257 Query: 242 RKLFLVNAFKDYGGNDRVLL 261 + +DY G+DRV L Sbjct: 258 LGYQNIMTEQDYAGHDRVTL 277 >gi|126665162|ref|ZP_01736145.1| Modification methylase HemK [Marinobacter sp. ELB17] gi|126630532|gb|EBA01147.1| Modification methylase HemK [Marinobacter sp. ELB17] Length = 314 Score = 125 bits (315), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 87/281 (30%), Positives = 131/281 (46%), Gaps = 33/281 (11%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L +VTG S + P+ + Q + + E + +LGW++F+++ L Sbjct: 38 DAELLLVQVTGWSRTRFRAFPEQHVSLVQAAAFEQLVDKRAAGEPVAYVLGWQEFWSLPL 97 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 +S+ T PRP+TE +V+ AL LP R+LDLGTGTGA+ LAL E P + Sbjct: 98 QVSAATLIPRPDTECVVEQALTLDLPA-----QARVLDLGTGTGAIALALASERPDWDIT 152 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL--------------------- 164 D A+ +A+SNA ++ ++S WF + + Sbjct: 153 ASDFVDAAVALAQSNAA--ALNLPIQVVKSHWFDQLTAVCFDQRLDESGDPRRDLRGDLN 210 Query: 165 ----FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220 FD+IVSNPPYI + +VR F+P +L G DGL R I LN Sbjct: 211 RDQGFDLIVSNPPYIANTDHHLSEGDVR-FEPASALVSGADGLDDIRHIVAAAPSWLNAG 269 Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 G +E GY+Q V + + V++ +DYG NDR+ L Sbjct: 270 GWLLLEHGYDQAQAVQGLLHQQGFDQVHSRQDYGRNDRMTL 310 >gi|330975578|gb|EGH75644.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 277 Score = 125 bits (315), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 78/240 (32%), Positives = 122/240 (50%), Gaps = 7/240 (2%) Query: 26 PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85 P+ ++ + R K E + ILG + F+ + L ++ T PRPETE+LV++A Sbjct: 42 PERIVSTEAAVAFAGYMERRRKGEPVAYILGQQGFWKLDLEVAPHTLIPRPETEMLVEAA 101 Query: 86 LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145 L + ++LDLGTGTGA+ LAL E +K VD +A+ +A+ N Sbjct: 102 LEL----VPAFAPAQVLDLGTGTGAIALALANERQQWKVTAVDRVPEAVALAERNRQRLQ 157 Query: 146 VSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204 ++ + +S WF ++G FD+I+SNPPYI +VR F+P +L G DGL Sbjct: 158 LNNA-EVFESHWFGGLQGRQFDLIISNPPYISDADPHLSAGDVR-FEPSSALVAGSDGLD 215 Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 RTI + HLN DG +E GY+Q V + + + +D G ++R+ C+ Sbjct: 216 DLRTIIEQAPAHLNADGWLLLEHGYDQGPAVRELLIRQGFERIQTRRDLGEHERITFGCK 275 >gi|330972815|gb|EGH72881.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Pseudomonas syringae pv. aceris str. M302273PT] Length = 277 Score = 125 bits (315), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 78/240 (32%), Positives = 123/240 (51%), Gaps = 7/240 (2%) Query: 26 PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85 P+ ++ + R K E + ILG + F+ + L ++ T PRPETE+LV++A Sbjct: 42 PERIVSTEAAVAFAGYMERRRKGEPVAYILGQQGFWKLDLEVAPHTLIPRPETEMLVEAA 101 Query: 86 LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145 L + ++LDLGTGTGA+ LAL + +K VD +A+ +A+ N Sbjct: 102 LEL----VPAFAPAQVLDLGTGTGAIALALANDRQQWKVTAVDRVPEAVALAERNRQRLQ 157 Query: 146 VSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204 ++ + +S WFS ++G FD+I+SNPPYI +VR F+P +L G DGL Sbjct: 158 LNNA-EVFESHWFSGLQGRQFDLIISNPPYISDADPHLSAGDVR-FEPSSALVAGSDGLD 215 Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 RTI + HLN DG +E GY+Q V + + + +D G ++R+ C+ Sbjct: 216 DLRTIIEQAPAHLNADGWLLLEHGYDQGPAVRELLIRQGFERIQTRRDLGEHERITFGCK 275 >gi|296111566|ref|YP_003621948.1| protoporphyrinogen oxidase (putative) [Leuconostoc kimchii IMSNU 11154] gi|295833098|gb|ADG40979.1| protoporphyrinogen oxidase (putative) [Leuconostoc kimchii IMSNU 11154] Length = 331 Score = 125 bits (315), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 80/221 (36%), Positives = 120/221 (54%), Gaps = 5/221 (2%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101 I + L ++ + ILG FY + PRPETE LV+ L +I + + + Sbjct: 110 IAKLLANQPVQYILGHAPFYGREFIVDERVLIPRPETEQLVEWILKDVSSQIAQP--ISV 167 Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 LD+GTG+GA+ L+ E+ +G DIS AL +A+ NA G+ ++SD +S+V Sbjct: 168 LDIGTGSGAIIETLMLENSDIRGFAADISSDALAVAELNAQRLGL-HYLHVIESDVYSAV 226 Query: 162 EGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220 GL FDVIVSNPPYI S D + + V +F+PR +L DGL+ Y +A+ + HL + Sbjct: 227 AGLKFDVIVSNPPYIASTDEDEMDISVLNFEPRTALFAEHDGLAIYELLAEKLDAHLTEH 286 Query: 221 GLCSVEIGYNQKVDVVRIF-ESRKLFLVNAFKDYGGNDRVL 260 G EIGY Q VV I ++ + +D+ G DR++ Sbjct: 287 GRAYFEIGYKQGQQVVDIMQQALPQAKITLRQDFAGLDRMI 327 >gi|229828876|ref|ZP_04454945.1| hypothetical protein GCWU000342_00961 [Shuttleworthia satelles DSM 14600] gi|229792039|gb|EEP28153.1| hypothetical protein GCWU000342_00961 [Shuttleworthia satelles DSM 14600] Length = 284 Score = 125 bits (315), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 80/233 (34%), Positives = 125/233 (53%), Gaps = 17/233 (7%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL----AFSLPRIEKRD 97 I R + + +I G + F + ++ PR +TE LV+ L + ++ R Sbjct: 48 IERRAQRIPLQQITGSQAFMGLDFMVNEHVLCPRQDTETLVEEGLTILASLQSGSVKNRQ 107 Query: 98 V-----VRILDLGTGTGAVCLALL-----KESPFFKGVGVDISCKALEIAKSNAVTNGVS 147 +R+LDL TG+G + ++LL +E+P G+ D+S +AL +A+ NA NGVS Sbjct: 108 ANADREIRLLDLCTGSGCILISLLALARGQETPI-HGLAADLSPEALAVARENAKRNGVS 166 Query: 148 ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207 F + SD F+ +EG FD+I +NPPYI S ++ L EVRD +PR++LDG DGL+ YR Sbjct: 167 AAF--VLSDLFAEIEGSFDLITANPPYIPSGQLEDLMPEVRDHEPRMALDGDEDGLAFYR 224 Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 IA +L + G +EI ++Q V ++ + +D G DRVL Sbjct: 225 RIAGQAPDYLREGGWLLMEIAFDQGQAVRQMLADGPFEEIEIIQDLSGRDRVL 277 >gi|145588323|ref|YP_001154920.1| HemK family modification methylase [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145046729|gb|ABP33356.1| [protein release factor]-glutamine N5-methyltransferase [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 283 Score = 125 bits (315), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 77/219 (35%), Positives = 118/219 (53%), Gaps = 3/219 (1%) Query: 44 RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103 + L E I ++G R F+N+ L ++ PR ETELLVD L + + +V++LD Sbjct: 62 KRLDGEPIAYLIGKRGFHNIELQVAPGVLIPRAETELLVDIGLKEIARLTDNQKMVKVLD 121 Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG 163 LGTG+GA+ LAL E+ D S AL IA+SNA + R Q +W+ ++ Sbjct: 122 LGTGSGAIALALTHEASNISVTATDQSLDALAIARSNAHYLELENRVCFAQGNWYEAISK 181 Query: 164 --LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221 +FD+I+SNPPYI + ++R F+P +L GL+ TI G HLN +G Sbjct: 182 NDVFDIILSNPPYIANHDPHLTQGDLR-FEPLSALTDHSTGLTCLETIIFGAKAHLNTEG 240 Query: 222 LCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 L +VE G++Q VV + + +L + D G++RV+ Sbjct: 241 LLAVEHGFDQSEAVVELMRTAQLKDIQIHLDLAGHNRVV 279 >gi|260438935|ref|ZP_05792751.1| protein-(glutamine-N5) methyltransferase [Butyrivibrio crossotus DSM 2876] gi|292808586|gb|EFF67791.1| protein-(glutamine-N5) methyltransferase [Butyrivibrio crossotus DSM 2876] Length = 276 Score = 125 bits (315), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 82/261 (31%), Positives = 140/261 (53%), Gaps = 12/261 (4%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 +A D+ G++ ++D ++ + F + I + L H + ILG F Sbjct: 21 EAGNDAWLLFSEAFGMTRTDYLIDKNAECNAGHIPFFDSCIEKRLAHIPVQYILGKAYFM 80 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG--AVCLALLKES 119 ++++ PR +TE+LV L ++ +D +ILD+ TG+G A+ L+LL + Sbjct: 81 GYEFEVNNNVLIPRFDTEVLVSEVLKYT------QDDFKILDMCTGSGCIAISLSLLSGA 134 Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179 GVDIS KAL +A N V N +++ ++S+ F +++G F++IVSNPPYI + Sbjct: 135 EV---TGVDISEKALAVADYNKVINK-ADKVTFVKSNMFENIDGAFNLIVSNPPYIPTKD 190 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 + L EV++ +P ++L+G DGL YR +A+ +++L +G +EIGYNQ DV + Sbjct: 191 IFELEHEVKNEEPMLALNGHDDGLFFYRILAEESAKYLRHNGGIFMEIGYNQAEDVRNLL 250 Query: 240 ESRKLFLVNAFKDYGGNDRVL 260 ++ KD G DRV+ Sbjct: 251 IKNNFTDISVIKDLAGLDRVV 271 >gi|218961885|ref|YP_001741660.1| modification methylase, HemK family [Candidatus Cloacamonas acidaminovorans] gi|167730542|emb|CAO81454.1| modification methylase, HemK family [Candidatus Cloacamonas acidaminovorans] Length = 273 Score = 125 bits (315), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 82/248 (33%), Positives = 121/248 (48%), Gaps = 8/248 (3%) Query: 17 LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRP 76 LS ++I+ +L D + + NA R K E I G FY + L ++ PRP Sbjct: 34 LSRSEIILSRQRILTDWEGEIIGNAFSRLEKGEPPQYITGTAYFYGLDLKVNPAVLIPRP 93 Query: 77 ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136 ETE LV+ ++ R+ + RILD+GTG+GA+ +AL P +IS ALE Sbjct: 94 ETERLVE----LTMERL--KGTERILDIGTGSGAIAIALKHNLPSLNVSATEISFSALET 147 Query: 137 AKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL 196 AK NA F SD F V+ ++V++SNPPYI + L ++D +P I+L Sbjct: 148 AKKNAEIYRADIHF--YLSDCFPPVKQSYEVLISNPPYISKAEIATLNSRIKDKEPVIAL 205 Query: 197 DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGN 256 GG DGL YR + S +L+++G ++E QK ++ I + KD Sbjct: 206 QGGEDGLDFYRKLLSESSEYLSENGFLALEHSDTQKEAIMNIARKEGWTKIEPLKDLTDK 265 Query: 257 DRVLLFCR 264 DR L R Sbjct: 266 DRYLFIYR 273 >gi|90412791|ref|ZP_01220791.1| putative HemK protein, Methylase of polypeptide chain release factors [Photobacterium profundum 3TCK] gi|90326150|gb|EAS42577.1| putative HemK protein, Methylase of polypeptide chain release factors [Photobacterium profundum 3TCK] Length = 282 Score = 125 bits (315), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 87/261 (33%), Positives = 133/261 (50%), Gaps = 11/261 (4%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ LC V ++ P+ D Q + R + E + ILG R+F+++ L Sbjct: 27 DAAVLLCHVLDKPRSYLLTWPEKEPSDEQFTLFEALLARRITGEPVAYILGEREFWSLPL 86 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 +S T PRP+TE LV+ AL +P +LDLGTGTGA+ LA+ E + Sbjct: 87 KVSPFTLIPRPDTERLVEVALE-KIP----TQACTVLDLGTGTGAIALAIASERNDAQVT 141 Query: 126 GVDISCKALEIAKSNAV-TNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVDC 182 G+D+ +A E+A N N + RF L W++ + + LF VIVSNPPYI++ Sbjct: 142 GIDLRPEAAELAAENGQRLNIQNARF--LAGSWYTPLASDELFAVIVSNPPYIDAADPHL 199 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 + +VR F+P+ +L +GL+ + I++ +HL G +E G+ Q V I + Sbjct: 200 VLGDVR-FEPKTALIADDNGLADIQIISEQGRQHLQTGGWLLMEHGFEQGEAVRHILQEL 258 Query: 243 KLFLVNAFKDYGGNDRVLLFC 263 LV+ +DY G DRV L C Sbjct: 259 GYHLVSTAQDYAGLDRVTLGC 279 >gi|66044203|ref|YP_234044.1| modification methylase HemK [Pseudomonas syringae pv. syringae B728a] gi|63254910|gb|AAY36006.1| Modification methylase HemK [Pseudomonas syringae pv. syringae B728a] Length = 277 Score = 125 bits (315), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 78/240 (32%), Positives = 123/240 (51%), Gaps = 7/240 (2%) Query: 26 PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85 P+ ++ + R K E + ILG + F+ + L ++ T PRPETE+LV++A Sbjct: 42 PERIVSTEAAVAFAGYMERRRKGEPVAYILGQQGFWKLDLEVAPHTLIPRPETEMLVEAA 101 Query: 86 LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145 L + ++LDLGTGTGA+ LAL + +K VD +A+ +A+ N Sbjct: 102 LEL----VPAFAPAQVLDLGTGTGAIALALANDRQQWKVTAVDRVPEAVALAERNRQRLQ 157 Query: 146 VSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204 ++ + +S WFS ++G FD+I+SNPPYI +VR F+P +L G DGL Sbjct: 158 LNNA-EVFESHWFSGLQGRQFDLIISNPPYISDADPHLSAGDVR-FEPSSALVAGSDGLD 215 Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 RTI + HLN DG +E GY+Q V + + + +D G ++R+ C+ Sbjct: 216 DLRTIIEQAPAHLNADGWLLLEHGYDQGPAVRELLIRQGFERIQTRRDLGEHERITFGCK 275 >gi|148266071|ref|YP_001232777.1| HemK family modification methylase [Geobacter uraniireducens Rf4] gi|146399571|gb|ABQ28204.1| [protein release factor]-glutamine N5-methyltransferase [Geobacter uraniireducens Rf4] Length = 284 Score = 125 bits (315), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 88/256 (34%), Positives = 126/256 (49%), Gaps = 9/256 (3%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 +S LC V GL + V+ D L + + + R K E + ILG ++F + Sbjct: 32 ESEWMLCAVLGLDRVGLYVNFDKPLTEAELSGYRGMVTRRSKREPLQYILGSQEFMGLEF 91 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 +S PR +TE+LV A A + RILD+G G+G V +AL K P + Sbjct: 92 EVSPAVLIPRHDTEVLVAEAAA------RCGEHCRILDIGVGSGCVSVALAKALPTATIL 145 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLG 184 GVD S +AL +A+ NA GV+ + F + FD+IVSNPPYI + + L Sbjct: 146 GVDSSPQALVLAQKNADKQGVT--VSLFEGSLFEPFQDQRFDLIVSNPPYIPTDDLKTLQ 203 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 EVRD++P +LDGG DGL YR I S +LN G E+G Q V+ + + Sbjct: 204 PEVRDYEPIQALDGGADGLDFYRLIVPAASDYLNPGGWLLFEVGVGQAEAVLGLLDKTGF 263 Query: 245 FLVNAFKDYGGNDRVL 260 + KD G +RV+ Sbjct: 264 GELFTAKDPNGIERVV 279 >gi|330899754|gb|EGH31173.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Pseudomonas syringae pv. japonica str. M301072PT] Length = 277 Score = 125 bits (315), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 78/240 (32%), Positives = 122/240 (50%), Gaps = 7/240 (2%) Query: 26 PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85 P+ ++ + R K E + ILG + F+ + L ++ T PRPETE+LV++A Sbjct: 42 PERIVSTEAAVAFAGYMERRRKGEPVAYILGQQGFWKLDLEVAPHTLIPRPETEMLVEAA 101 Query: 86 LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145 L + ++LDLGTGTGA+ LAL E +K VD +A+ +A+ N Sbjct: 102 LEL----VPAFASAQVLDLGTGTGAIALALANERQQWKVTAVDRVPEAVALAERNRQRLQ 157 Query: 146 VSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204 ++ + +S WF ++G FD+I+SNPPYI +VR F+P +L G DGL Sbjct: 158 LNNA-EVFESHWFGGLQGRQFDLIISNPPYISDADPHLSAGDVR-FEPSSALVAGSDGLD 215 Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 RTI + HLN DG +E GY+Q V + + + +D G ++R+ C+ Sbjct: 216 DLRTIIEQAPAHLNADGWLLLEHGYDQGPAVRELLIRQGFERIQTRRDLGEHERITFGCK 275 >gi|294670647|ref|ZP_06735523.1| hypothetical protein NEIELOOT_02370 [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291307617|gb|EFE48860.1| hypothetical protein NEIELOOT_02370 [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 271 Score = 125 bits (315), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 91/260 (35%), Positives = 126/260 (48%), Gaps = 17/260 (6%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 ++ L VTG + Q+I +LD+ Q L R L E + ILGWR+FY R Sbjct: 16 EARMLLQAVTGWTRAQLITRDGEMLDEGQTADLQAMQQRRLNGEPMAYILGWREFYGRRF 75 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 + T PRPETE LV++AL P+ + DLGTG+GAV + L E P + Sbjct: 76 RTTPATLIPRPETEHLVEAALQHLPPQ------GLVWDLGTGSGAVAVTLACERPDASVL 129 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWF----SSVEGLFDVIVSNPPYIESVIVD 181 DIS AL +A+ NA NG F WF S + FD++VSNPPYIE+ D Sbjct: 130 ASDISPAALAVARQNAADNGADVSFAC--GSWFDIDRPSEKHGFDLLVSNPPYIEA---D 184 Query: 182 CLGLEVRD--FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 L+ D F+P +L DGLS R +A + +L G +E G+NQ V +I Sbjct: 185 DGHLQQGDLRFEPANALTDFSDGLSCIRELAAHGAEYLKPGGRLIMEHGWNQGAAVRQIL 244 Query: 240 ESRKLFLVNAFKDYGGNDRV 259 + + D G +R+ Sbjct: 245 AAAGWTEIETQTDLAGLERI 264 >gi|54309993|ref|YP_131013.1| putative HemK protein, methylase of polypeptide chain release factors [Photobacterium profundum SS9] gi|46914432|emb|CAG21211.1| putative HemK protein, Methylase of polypeptide chain release factors [Photobacterium profundum SS9] Length = 282 Score = 125 bits (315), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 86/261 (32%), Positives = 132/261 (50%), Gaps = 11/261 (4%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ LC V ++ P+ D Q + R + E + ILG R+F+++ L Sbjct: 27 DAAVLLCHVLDKPRSYLLTWPEKAPSDEQFTLFEALLARRITGEPVAYILGEREFWSLPL 86 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 +S T PRP+TE LV+ AL +P +LDLGTGTGA+ LA+ E + Sbjct: 87 KVSPFTLIPRPDTERLVELALE-KIP----TQACTVLDLGTGTGAIALAIASERNDAQVT 141 Query: 126 GVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVDC 182 G+D+ +A E+A N + RF L W++ + + LF VIVSNPPYI++ Sbjct: 142 GIDLRPEAAELAAENGQRLNIQNVRF--LAGSWYTPLASDELFSVIVSNPPYIDAADPHL 199 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 + +VR F+P+ +L +GL+ + I++ +HL G +E G+ Q V I + Sbjct: 200 VLGDVR-FEPKTALVADDNGLADIQIISEQGRQHLQTGGWLLMEHGFEQGEAVRHILQEL 258 Query: 243 KLFLVNAFKDYGGNDRVLLFC 263 LV+ +DY G DRV L C Sbjct: 259 GYHLVSTAQDYAGLDRVTLGC 279 >gi|40062642|gb|AAR37563.1| modification methylase, HemK family [uncultured marine bacterium 313] Length = 279 Score = 125 bits (315), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 83/267 (31%), Positives = 140/267 (52%), Gaps = 27/267 (10%) Query: 17 LSSHQVI---VDPDSVLDD----RQRFFLTN---------------AIVRSLKHESIHRI 54 L +H +I +D +L D + FF+TN AI R +K E + I Sbjct: 14 LKNHNIISHELDAQVILSDIMGVTRDFFITNSHINVSKNTIKKFDHAIKRRVKREPVAYI 73 Query: 55 LGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLA 114 + ++F++ ++ T PR ETELL+ + F K + +LD+GTG+G + L+ Sbjct: 74 IRKKEFWSQDFLVNQATLVPRAETELLIYKVVDFF-----KNKRINVLDIGTGSGCILLS 128 Query: 115 LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174 +LKE +GVG+DIS KA++ A++N+ + R D G +D+IVSNPPY Sbjct: 129 ILKELDLSRGVGIDISAKAIKTAQTNSKNLNLFHRSKFKVFDISKFNVGKYDLIVSNPPY 188 Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234 I S + L ++ +++P ++L+GG+DGL R + + L K+GL ++EIG+NQ + Sbjct: 189 IPSKDIKNLSQDIINYEPLVALNGGLDGLDLIRKVIYKSNSLLKKNGLFAIEIGFNQYLK 248 Query: 235 VVRIFESRKLFLVNAFKDYGGNDRVLL 261 V + + ++ DY N R ++ Sbjct: 249 VSSLLKKYGFREMHRQCDYDHNVRCII 275 >gi|146311982|ref|YP_001177056.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Enterobacter sp. 638] gi|145318858|gb|ABP61005.1| [protein release factor]-glutamine N5-methyltransferase [Enterobacter sp. 638] Length = 276 Score = 125 bits (315), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 90/258 (34%), Positives = 131/258 (50%), Gaps = 8/258 (3%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 RD+ L VTG + ++ ++ L Q L++ + R E + + G R+F+++ Sbjct: 22 RDAEILLEHVTGKARTYLLAFGETELTADQHAQLSDLLSRRKAGEPVAHLTGEREFWSLP 81 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L +S+ T PRP+TE LV+ ALA LP RILDLGTGTGA+ LAL E P + Sbjct: 82 LYVSAATLIPRPDTECLVEHALA-RLPAT----ACRILDLGTGTGAIALALASERPDCQI 136 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183 VD+ A+ +A N G + QS WF ++ G F++IVSNPPYI+ Sbjct: 137 TAVDVMPDAVALALRNVARLGFN-NVKIQQSSWFDALVGQQFEMIVSNPPYIDERDPHLS 195 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 +VR F+P +L +GL+ I +HL G +E G+ Q V +F Sbjct: 196 QGDVR-FEPLTALVAAEEGLADIAHIVTVSRQHLTAGGWLLIEHGWTQGEAVRALFTHAG 254 Query: 244 LFLVNAFKDYGGNDRVLL 261 V +DYGGNDR+ L Sbjct: 255 YERVETCQDYGGNDRLTL 272 >gi|78221602|ref|YP_383349.1| modification methylase HemK [Geobacter metallireducens GS-15] gi|78192857|gb|ABB30624.1| [protein release factor]-glutamine N5-methyltransferase [Geobacter metallireducens GS-15] Length = 284 Score = 125 bits (315), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 82/256 (32%), Positives = 124/256 (48%), Gaps = 9/256 (3%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 ++ L GL + V+ D L+ + + + R K E + +LG ++F + Sbjct: 32 ETEWLLSAALGLDRVGLYVNFDKPLNAEELSAVRGLVARRAKREPLQYVLGTQEFCGLDF 91 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 ++ PR +TE+LV+ AL +LD+G G+G + +AL K P + Sbjct: 92 AVTPAVLIPRHDTEVLVEEALR------RAPHAATVLDIGVGSGCIAVALAKNLPDAQVW 145 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS-VEGLFDVIVSNPPYIESVIVDCLG 184 GV+ S A+ +A+ N +GV R F + FD+IVSNPPYI + +D L Sbjct: 146 GVEQSAGAITLARQNVERHGV--RVILCAGSLFEPFADQRFDLIVSNPPYIPTADLDTLQ 203 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 EVR+++PR +LDGG DGL YR I HLN G VE+G Q V+ +F+ Sbjct: 204 PEVREYEPRAALDGGADGLDFYRIIVPAALEHLNAGGWLMVELGIGQAEAVLGMFKQAGF 263 Query: 245 FLVNAFKDYGGNDRVL 260 KD G DRV+ Sbjct: 264 TGCFTAKDLNGIDRVV 279 >gi|327470058|gb|EGF15522.1| protein-(glutamine-N5) methyltransferase [Streptococcus sanguinis SK330] Length = 276 Score = 125 bits (315), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 82/234 (35%), Positives = 124/234 (52%), Gaps = 14/234 (5%) Query: 30 LDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFS 89 L+DR++ V L H+ I+G DF+ + L + PRPETE LV+ L+ + Sbjct: 49 LEDREQLKAIQGQV--LAHKPAQYIIGSSDFHGLTLKVDERVLIPRPETEELVELILSEN 106 Query: 90 LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 + +LD+GTG+GA+ LAL+ P ++ D+S AL +A NA + G+S Sbjct: 107 -----PESSLSVLDIGTGSGAIALALVNSRPDWQITASDLSKDALSLAADNAQSCGLSLT 161 Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209 F +QSD S++G FD+IVSNPPYI + +GL V +P ++L DG + YR I Sbjct: 162 F--VQSDCLDSIQGKFDIIVSNPPYISEANKNEVGLNVLTSEPHMALFAEEDGCAVYRKI 219 Query: 210 ADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF---LVNAFKDYGGNDRVL 260 A+ +L + G +EIGY Q V + +K F + KD G DR++ Sbjct: 220 AEQAGDYLTEKGKIYLEIGYKQGDSVRELL--KKSFPQKQIRVLKDQFGKDRMV 271 >gi|327393651|dbj|BAK11073.1| protein methyltransferase HemK [Pantoea ananatis AJ13355] Length = 280 Score = 125 bits (315), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 85/256 (33%), Positives = 132/256 (51%), Gaps = 8/256 (3%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 RD+ L VTG S ++ +++L + Q L + R + E + ++G R+F+++ Sbjct: 22 RDAEILLGFVTGKSRSWLVAFDETLLTEAQLQQLDVLLARRARGEPVAHLIGEREFWSLP 81 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L ++ T PRP+TE+LV+ ALA LP R+LD+GTG+GA+ LA+ E P Sbjct: 82 LQVNDATLIPRPDTEILVEQALAH-LP----ESPARVLDMGTGSGAIALAIASERPDCDV 136 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCL 183 +GVD A+ +A+ NA + +QS WF+ + FD+IVSNPPYI++ Sbjct: 137 IGVDRIPAAVALAQRNAAHLAIPNA-TFIQSHWFAQITPARFDLIVSNPPYIDANDRHLN 195 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 +VR F+PR +L GL+ R + + L G +E G+ Q V + + Sbjct: 196 EGDVR-FEPRSALVAEEAGLADLRLLIEQAINWLQPGGWLLLEHGWQQDEAVRHLMQQHH 254 Query: 244 LFLVNAFKDYGGNDRV 259 V DYGGN RV Sbjct: 255 YLSVATANDYGGNPRV 270 >gi|289647288|ref|ZP_06478631.1| hemK protein [Pseudomonas syringae pv. aesculi str. 2250] Length = 277 Score = 125 bits (315), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 80/240 (33%), Positives = 121/240 (50%), Gaps = 7/240 (2%) Query: 26 PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85 P+ ++ + R E + ILG + F+ + L ++ T PRPETE+LV++A Sbjct: 42 PERIVSTEAALAFAGYLQRRRTGEPVAYILGQQGFWKLDLEVAPHTLIPRPETEMLVEAA 101 Query: 86 LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145 L + P ++LDLGTGTGA+ LAL E +K VD +A+ +A+ N Sbjct: 102 LELA-PAFAP---AKVLDLGTGTGAIALALANERQQWKVTAVDRVPEAVALAERNRQRLQ 157 Query: 146 VSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204 + + L S WFS++EG FD+I+SNPPYI +VR F+P +L G DGL Sbjct: 158 L-DNAQVLNSHWFSALEGQQFDLIISNPPYIADADPHLSAGDVR-FEPSSALTAGSDGLD 215 Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 RTI HL+ DG +E GY+Q V + + +D G ++R+ C+ Sbjct: 216 DLRTIIADAPVHLSADGWLLLEHGYDQGPAVRELLTRHGFERIQTRRDLGEHERITFGCK 275 >gi|262282282|ref|ZP_06060050.1| protoporphyrinogen oxidase [Streptococcus sp. 2_1_36FAA] gi|262261573|gb|EEY80271.1| protoporphyrinogen oxidase [Streptococcus sp. 2_1_36FAA] Length = 276 Score = 125 bits (315), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 79/218 (36%), Positives = 118/218 (54%), Gaps = 12/218 (5%) Query: 46 LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLG 105 L H+ I+G DF+ + L + PRPETE LV+ L+ + V +LD+G Sbjct: 63 LAHKPAQYIIGSSDFHGLNLKVDERVLIPRPETEELVELILSEN-----PESSVSVLDIG 117 Query: 106 TGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF 165 TG+GA+ LAL P ++ D+S AL +A+ NA + G+S F +QSD +++G F Sbjct: 118 TGSGAIALALANSRPDWQITASDLSEDALSLARENARSCGLSLTF--VQSDCLDAIQGNF 175 Query: 166 DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225 D+IVSNPPYI D +GL V +P ++L DG YR I + +L + G + Sbjct: 176 DIIVSNPPYISEADKDEVGLNVLTSEPHMALFAEEDGYEVYRKITEQAGDYLTEKGKIYL 235 Query: 226 EIGYNQK---VDVVRIFESRKLFLVNAFKDYGGNDRVL 260 EIGY Q VD+++ F +K + KD G DR++ Sbjct: 236 EIGYKQGDGVVDLLKQFFPQK--RIRVLKDQFGKDRMV 271 >gi|258542229|ref|YP_003187662.1| modification methylase HemK [Acetobacter pasteurianus IFO 3283-01] gi|256633307|dbj|BAH99282.1| modification methylase HemK [Acetobacter pasteurianus IFO 3283-01] gi|256636366|dbj|BAI02335.1| modification methylase HemK [Acetobacter pasteurianus IFO 3283-03] gi|256639419|dbj|BAI05381.1| modification methylase HemK [Acetobacter pasteurianus IFO 3283-07] gi|256642475|dbj|BAI08430.1| modification methylase HemK [Acetobacter pasteurianus IFO 3283-22] gi|256645530|dbj|BAI11478.1| modification methylase HemK [Acetobacter pasteurianus IFO 3283-26] gi|256648583|dbj|BAI14524.1| modification methylase HemK [Acetobacter pasteurianus IFO 3283-32] gi|256651636|dbj|BAI17570.1| modification methylase HemK [Acetobacter pasteurianus IFO 3283-01-42C] gi|256654627|dbj|BAI20554.1| modification methylase HemK [Acetobacter pasteurianus IFO 3283-12] Length = 292 Score = 125 bits (314), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 85/260 (32%), Positives = 138/260 (53%), Gaps = 7/260 (2%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 R++ L L+ Q++ + + FF + + R HE I G + F+++ Sbjct: 34 REARLLLIHALSLTPEQLLARSPTENVPSEPFF--SYVNRRAAHEPFAYITGSKGFWSLD 91 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L +S + PR +TE L+ S L + R ++ + ILDLGTGTG + LA L E P G Sbjct: 92 LAVSPASLVPRGDTETLITSLLEY---RPDQTAALNILDLGTGTGCLLLAALAEYPKAHG 148 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVDC 182 VGVDI+ +A +A +NA +S+R + ++W +++ + FDV++SNPPYI + + Sbjct: 149 VGVDINPQAAILAHANAQRCCMSDRALFMAAEWDAALVPDMRFDVVLSNPPYIPTSDLAD 208 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 L EVR+ +P +LDGG DGL+ YR I + L GL +EIG Q+ + + + Sbjct: 209 LMPEVREHEPVRALDGGDDGLNAYRYICSRLPFLLVDGGLAVLEIGIGQEEALRALASTN 268 Query: 243 KLFLVNAFKDYGGNDRVLLF 262 L +V+ D G R ++ Sbjct: 269 VLRVVDVKADLAGIARAVVL 288 >gi|153801641|ref|ZP_01956227.1| hemK protein [Vibrio cholerae MZO-3] gi|124122818|gb|EAY41561.1| hemK protein [Vibrio cholerae MZO-3] Length = 286 Score = 125 bits (314), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 90/260 (34%), Positives = 129/260 (49%), Gaps = 13/260 (5%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ LC V ++ PD +L+ L + R E + ILG R+F+++ L Sbjct: 27 DAAVLLCHVLAKPRSYLLTWPDKILEKPTLASLELLLARRRAGEPMAYILGEREFWSLPL 86 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV--RILDLGTGTGAVCLALLKESPFFK 123 +S T PRP+TE LV+ AL +K ++ +LDLGTGTGA+ LAL E P + Sbjct: 87 KVSPSTLIPRPDTERLVELAL-------DKAALIDGELLDLGTGTGAIALALASELPTRQ 139 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIESVIVD 181 G+D+ +A E+A+ NA + Q WFS + F +IVSNPPYIE Sbjct: 140 VTGIDLRPEAAELARENATRLAI-HNAQFFQGSWFSPLADGTKFALIVSNPPYIEENDPH 198 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P+ +L +GL+ R I+ R L DG E GY+Q V V I Sbjct: 199 LSLGDVR-FEPKSALVAAENGLADIRHISTHAPRFLLDDGWLLFEHGYDQGVAVRTIMRD 257 Query: 242 RKLFLVNAFKDYGGNDRVLL 261 + +DY G+DRV L Sbjct: 258 LGYQNIITEQDYAGHDRVTL 277 >gi|300313562|ref|YP_003777654.1| polypeptide chain release factors methylase [Herbaspirillum seropedicae SmR1] gi|300076347|gb|ADJ65746.1| polypeptide chain release factors methylase protein [Herbaspirillum seropedicae SmR1] Length = 277 Score = 125 bits (314), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 90/252 (35%), Positives = 132/252 (52%), Gaps = 11/252 (4%) Query: 10 FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69 LC L+ Q+I + L + L + R L+ E I I+G R+FY + L +S Sbjct: 29 LLCHALRLTRVQLITQSERQLSAAEAETLAALLARRLRGEPIAYIVGQREFYGLDLRVSP 88 Query: 70 DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129 D PRP+TELLV+ AL LP+ LD+GTG+GA+ +A+ P + +D Sbjct: 89 DVLIPRPDTELLVELALE-RLPQGGS-----ALDMGTGSGAIAVAIAHTRPDAQVTALDA 142 Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCLGLEV 187 S AL IA+ NA T+ V R L+SDW+ +++ FD+IVSNPPYI + + ++ Sbjct: 143 SPAALAIARENASTHQVRVRL--LESDWYGALDADQAFDLIVSNPPYIVAGDIHLSQGDL 200 Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLV 247 R F+P +L DGLS RTI +G HL G +E GY+Q V + V Sbjct: 201 R-FEPVDALTDHADGLSDLRTIIEGAPAHLKAGGWLLMEHGYDQAAAVRALLTGGGWREV 259 Query: 248 NAFKDYGGNDRV 259 +++D G +RV Sbjct: 260 QSWRDLAGIERV 271 >gi|309379284|emb|CBX22057.1| unnamed protein product [Neisseria lactamica Y92-1009] Length = 273 Score = 125 bits (314), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 84/221 (38%), Positives = 114/221 (51%), Gaps = 12/221 (5%) Query: 44 RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103 R L E + +LGWR+FY R ++ + PRPETE LV++ LA LP + R+ D Sbjct: 54 RRLNGEPVAYLLGWREFYGRRFAVNPNVLIPRPETEHLVEAVLA-RLP-----ENGRVWD 107 Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS--- 160 LGTG+GAV + + E P DIS ALE A+ NA G + F WF + Sbjct: 108 LGTGSGAVAVTVALERPDAFVCASDISPSALETARKNAADLGAAVEF--AHGSWFDTDMP 165 Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220 EG +D+IVSNPPYIE+ ++R F+P+I+L DGLS RT+A G L + Sbjct: 166 SEGKWDIIVSNPPYIENGDEHLSQGDLR-FEPQIALTDFSDGLSCIRTLAQGAPDRLAEG 224 Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 G +E G++Q V + V D G DRV L Sbjct: 225 GFLLLEHGFDQGAAVRGVLAENGFSGVETLPDLAGLDRVTL 265 >gi|206578511|ref|YP_002237909.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Klebsiella pneumoniae 342] gi|206567569|gb|ACI09345.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Klebsiella pneumoniae 342] Length = 282 Score = 125 bits (314), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 89/258 (34%), Positives = 132/258 (51%), Gaps = 8/258 (3%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 RD+ L VTG + ++ ++ L + L + R + E I ++G R+F+++ Sbjct: 22 RDAEILLGHVTGRARTWILAFGETTLSADEATTLEALLQRRQRGEPIAHLIGQREFWSLP 81 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L +S T PRP+TE LV+ ALA LP + RILDLGTGTGA+ LAL E P + Sbjct: 82 LFVSPATLIPRPDTECLVEQALA-RLPAVP----CRILDLGTGTGAIALALASERPDCEV 136 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCL 183 VD+ A+ +A NA ++ QSDWFS++ G F +IVSNPPYI++ Sbjct: 137 TAVDVMPDAVALALRNAAHLDIAN-VTIRQSDWFSALAGQRFAMIVSNPPYIDAADPHLA 195 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 +VR F+P +L GL+ I ++L G +E G+ Q V +F Sbjct: 196 EGDVR-FEPLTALVAADQGLADLAQIIREGRQYLLPGGWMLLEHGWTQGEAVRALFREAG 254 Query: 244 LFLVNAFKDYGGNDRVLL 261 V +DYG N+R+ L Sbjct: 255 YLDVATCRDYGDNERLTL 272 >gi|39998193|ref|NP_954144.1| HemK family modification methylase [Geobacter sulfurreducens PCA] gi|39985139|gb|AAR36494.1| modification methylase, HemK family [Geobacter sulfurreducens PCA] gi|298507131|gb|ADI85854.1| peptide chain release factor methyltransferase [Geobacter sulfurreducens KN400] Length = 284 Score = 125 bits (314), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 80/256 (31%), Positives = 126/256 (49%), Gaps = 9/256 (3%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 ++ L GL + V+ D L+ + + R K E + ILG ++F + Sbjct: 32 ETEWLLSAALGLDRVGLYVNFDKPLNPEELAACRGLVARRAKREPLQYILGTQEFCGLDF 91 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 ++ PR +TE++V+ AL +LD+G G+G + +AL K+ P + V Sbjct: 92 VVTPSVLIPRHDTEVIVEEALR------RAPHAAAVLDIGVGSGCIAVALAKQLPHAQVV 145 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLG 184 GV+ S A+ +A+ NA +G R + F + + FD+IVSNPPYI + ++ L Sbjct: 146 GVEQSPGAIALAQRNAERHGA--RVTLFEGSLFEPLGDQRFDLIVSNPPYIPTADLEALQ 203 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 EVR+++PR +LDGG DGL YR I +LN G VE+G Q V+ +F Sbjct: 204 PEVREYEPRAALDGGSDGLDFYRLIVPAAPEYLNPGGWLMVELGIGQAETVLGMFSRTGF 263 Query: 245 FLVNAFKDYGGNDRVL 260 +D G DRV+ Sbjct: 264 CDCFTAQDPNGIDRVV 279 >gi|301060380|ref|ZP_07201243.1| protein-(glutamine-N5) methyltransferase, release factor-specific [delta proteobacterium NaphS2] gi|300445576|gb|EFK09478.1| protein-(glutamine-N5) methyltransferase, release factor-specific [delta proteobacterium NaphS2] Length = 299 Score = 125 bits (314), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 71/223 (31%), Positives = 118/223 (52%), Gaps = 4/223 (1%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101 I R L+HE + I G ++F+++ ++ PRPETE+LV+ A+ + E+ +R Sbjct: 66 IKRRLEHEPLQYITGKQEFWSLSFQVNPHVLIPRPETEILVEQAMDLATALTEEGTQLRF 125 Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 LDLGTG+G + +A+ K+ P DIS KAL++A++NA +GVS +Q D F + Sbjct: 126 LDLGTGSGVIAVAMAKQIPESLVFATDISGKALDVARANAQAHGVSSSITFIQGDLFEPL 185 Query: 162 ---EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 + F +I SNPPY+ + + L E+ ++PR +LDGG DG+ + + I R L Sbjct: 186 MLEKPAFHLIASNPPYVCTHEISGLQSEIALYEPRAALDGGKDGMDYLKEIIKQAPRFLL 245 Query: 219 KDGLCSVEIGYNQKVDVVRIFESRKLFL-VNAFKDYGGNDRVL 260 G +E+ Q + ++ +DY + RV+ Sbjct: 246 PGGWLLLEMSPFQVEKALFALAETDVYQNTKPVQDYSHHQRVI 288 >gi|299065548|emb|CBJ36719.1| N5-glutamine methyltransferase, modifies release factors RF-1 and RF-2 [Ralstonia solanacearum CMR15] Length = 306 Score = 125 bits (314), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 91/260 (35%), Positives = 127/260 (48%), Gaps = 15/260 (5%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 ++ + VTGLS Q+I +DD R L R L E + +LG R+F+ Sbjct: 42 EARMLVSHVTGLSRVQLITQDTCGIDDGTRTRLAELATRRLAGEPMAYLLGEREFFGRMF 101 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG--AVCLALLKESPFFK 123 ++ PRP+TELLV+ AL RI+ RDV +LDLGTG+G AV +AL + + Sbjct: 102 QVTPAVLIPRPDTELLVEQALD----RIDDRDVPAVLDLGTGSGIIAVTIALARRD--AR 155 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-----EGLFDVIVSNPPYIESV 178 D S AL +A NA G + L DW++++ +FD+IVSNPPYI S Sbjct: 156 VWATDTSADALAVAVRNAQALGAANMHAAL-GDWYAALPESDAPPVFDLIVSNPPYIAST 214 Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238 ++R F+P +L DGL H RTI G L DG +E GY+Q V + Sbjct: 215 DAHLGQGDLR-FEPAGALTDHGDGLRHLRTIVAGAPARLAADGWLLLEHGYDQGPAVRAL 273 Query: 239 FESRKLFLVNAFKDYGGNDR 258 V +D G+DR Sbjct: 274 LADAGFADVFTAQDLAGHDR 293 >gi|296113366|ref|YP_003627304.1| protein methyltransferase HemK [Moraxella catarrhalis RH4] gi|295921060|gb|ADG61411.1| protein methyltransferase HemK [Moraxella catarrhalis RH4] gi|326559851|gb|EGE10251.1| protein methyltransferase HemK [Moraxella catarrhalis 7169] gi|326560801|gb|EGE11168.1| protein methyltransferase HemK [Moraxella catarrhalis 103P14B1] gi|326563538|gb|EGE13797.1| protein methyltransferase HemK [Moraxella catarrhalis 12P80B1] gi|326569661|gb|EGE19713.1| protein methyltransferase HemK [Moraxella catarrhalis BC1] gi|326570144|gb|EGE20189.1| protein methyltransferase HemK [Moraxella catarrhalis BC8] gi|326570883|gb|EGE20907.1| protein methyltransferase HemK [Moraxella catarrhalis BC7] gi|326574432|gb|EGE24374.1| protein methyltransferase HemK [Moraxella catarrhalis 101P30B1] gi|326575975|gb|EGE25898.1| protein methyltransferase HemK [Moraxella catarrhalis CO72] Length = 295 Score = 125 bits (314), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 77/229 (33%), Positives = 126/229 (55%), Gaps = 10/229 (4%) Query: 38 LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFS-----LPR 92 +T I++ + + + G + F+ +++ T PR +TE+LV++ L ++ + + Sbjct: 65 ITAGIMQLSAGKPLAYLTGQQSFWGRHFLVNAHTLIPRADTEILVETILNYAKAQQKIRQ 124 Query: 93 IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152 + +++V ILDLGTGTG + + L E F + V VDIS +AL++A+ N + ++ R Sbjct: 125 TDNKNLVNILDLGTGTGCIGITLALELEFAQVVLVDISSEALKVAEQN--NHRLNARCQL 182 Query: 153 LQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212 LQS W V G FD+IVSNPPYI+ + L+ +P +L DGL+ R I + Sbjct: 183 LQSHWLQKVSGQFDIIVSNPPYIKENDEHLVNLK---HEPITALVAAEDGLTDIRHIIET 239 Query: 213 VSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 +L GL ++E G++Q V ++ S V +DYGGNDRV L Sbjct: 240 GRAYLKDGGLMAIEHGFDQAEAVRNLYLSSGYLDVYTIQDYGGNDRVTL 288 >gi|282850387|ref|ZP_06259766.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Veillonella parvula ATCC 17745] gi|282579880|gb|EFB85284.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Veillonella parvula ATCC 17745] Length = 289 Score = 125 bits (313), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 78/218 (35%), Positives = 123/218 (56%), Gaps = 9/218 (4%) Query: 47 KHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGT 106 K + I+G +DF + ++ PRP+TE L++ L + P K VRILD+ T Sbjct: 71 KGHCVAAIIGEKDFMGLTFKVNDKVLIPRPDTETLIEHVLG-TYP---KDSNVRILDVCT 126 Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--- 163 G G + L+LL P GVG+DIS AL +A+ N + +S+R ++SD F ++ G Sbjct: 127 GPGTILLSLLHYLPNASGVGLDISTDALPVARENGESFNLSDRVQFMESDMFHTLYGKKE 186 Query: 164 LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223 FD+IVSNPPYI + + L +V + +P I+L GG DGL YR +A +LN +G Sbjct: 187 KFDLIVSNPPYIRTGDLKMLSPDVLN-EPHIALFGGEDGLQFYRILAKECRNYLNANGRV 245 Query: 224 SVEIGYNQKVDVVRIF-ESRKLFLVNAFKDYGGNDRVL 260 + E+G++Q +V + E+ + + D GG++RV+ Sbjct: 246 AFEVGFDQAEEVGALLQETGQYSNIQFIADLGGHNRVV 283 >gi|288934822|ref|YP_003438881.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Klebsiella variicola At-22] gi|288889531|gb|ADC57849.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Klebsiella variicola At-22] Length = 282 Score = 125 bits (313), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 89/258 (34%), Positives = 132/258 (51%), Gaps = 8/258 (3%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 RD+ L VTG + ++ ++ L + L + R + E I ++G R+F+++ Sbjct: 22 RDAEILLGHVTGRARTWILAFGETTLSADEATTLEALLQRRQRGEPIAHLVGQREFWSLP 81 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L +S T PRP+TE LV+ ALA LP + RILDLGTGTGA+ LAL E P + Sbjct: 82 LFVSPATLIPRPDTECLVEQALA-RLPAVP----CRILDLGTGTGAIALALASERPDCEV 136 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCL 183 VD+ A+ +A NA ++ QSDWFS++ G F +IVSNPPYI++ Sbjct: 137 TAVDVMPDAVALALRNAAHLDIAN-VTIRQSDWFSALAGQRFAMIVSNPPYIDAADPHLA 195 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 +VR F+P +L GL+ I ++L G +E G+ Q V +F Sbjct: 196 EGDVR-FEPLTALVAADQGLADLAQIIREGRQYLLPGGWMLLEHGWTQGEAVRALFREAG 254 Query: 244 LFLVNAFKDYGGNDRVLL 261 V +DYG N+R+ L Sbjct: 255 YLDVATCRDYGDNERLTL 272 >gi|327538346|gb|EGF25019.1| modification methylase, HemK family [Rhodopirellula baltica WH47] Length = 296 Score = 125 bits (313), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 86/259 (33%), Positives = 130/259 (50%), Gaps = 5/259 (1%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L G ++ D V ++ QR + R + + +++G+R+FY++ + Sbjct: 34 DAEILLAHARGCQRIELYTSFDKVPEEEQRVAFRELVRRRGEGAPVAQLVGYREFYSISI 93 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 + + PRPETE LV A+ R+ R +LD+GTG+GA+ +A+ K P + Sbjct: 94 RVDENVLVPRPETEHLVIEAIDQIKGRMSDRPSPTVLDIGTGSGAIAVAIAKSLPKTQVT 153 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIESVIVDCL 183 VDIS AL+IAK N +S+R LQSD F +E FDVI SNPPYI D L Sbjct: 154 AVDISLTALDIAKWNVENLKLSDRVTLLQSDLFDGLEPDQTFDVICSNPPYISQSEYDEL 213 Query: 184 GLEVRDFDPRISLDGGIDGLSHY-RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 VR+F+PR +L G DG R + D V R LN G +E+ + E Sbjct: 214 PTTVREFEPRGALLSGPDGTEIIARLLTDSVQR-LNDGGQLIIELSPMIAGVCKTLAEQN 272 Query: 243 KLFL-VNAFKDYGGNDRVL 260 + ++ KD G++R+L Sbjct: 273 GGYQEIHLIKDLAGHERIL 291 >gi|260436445|ref|ZP_05790415.1| modification methylase, HemK family [Synechococcus sp. WH 8109] gi|260414319|gb|EEX07615.1| modification methylase, HemK family [Synechococcus sp. WH 8109] Length = 295 Score = 125 bits (313), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 78/208 (37%), Positives = 107/208 (51%), Gaps = 10/208 (4%) Query: 57 WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116 WRD V L S PR ETELLVD A++ + + R DLGTG+GA+ +AL Sbjct: 87 WRD---VLLESSPAALIPRQETELLVDLAMS----QFKTTPPARWADLGTGSGAIAVALA 139 Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPP 173 + P G GVD+S AL++A+ N W+S ++ G D++VSNPP Sbjct: 140 RAWPTAPGHGVDLSPDALQLAEHNLQGCAPHHNCSLHLGSWWSPLKSWWGSLDLVVSNPP 199 Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233 YI +VD L VRD +P ++L GG DGL RT+ DG L+ G +E Y+Q V Sbjct: 200 YIPCAVVDGLEAVVRDHEPHLALLGGADGLDAIRTVVDGAPTGLSPGGWLLLEHHYDQSV 259 Query: 234 DVVRIFESRKLFLVNAFKDYGGNDRVLL 261 V+++ + L V A D G R L Sbjct: 260 QVIQLLQDAGLVEVRAAADLEGTLRFAL 287 >gi|254482780|ref|ZP_05096017.1| protein-(glutamine-N5) methyltransferase, release factor-specific [marine gamma proteobacterium HTCC2148] gi|214036861|gb|EEB77531.1| protein-(glutamine-N5) methyltransferase, release factor-specific [marine gamma proteobacterium HTCC2148] Length = 277 Score = 125 bits (313), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 77/219 (35%), Positives = 118/219 (53%), Gaps = 8/219 (3%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101 + R + E + + G R+F+++ L ++ T PRPETE LV+ AL LP D Sbjct: 58 LQRRYRGEPVAYLTGHREFWSLDLAVAPSTLIPRPETETLVEWALELPLP-----DDTVA 112 Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 LDLGTGTGA+ LAL E P ++ G D++ A+++A +NA+ N ++ R + +QSDWF V Sbjct: 113 LDLGTGTGAIALALANEKPGWRVCGADVNIDAVQLASNNALANNLA-RVEFIQSDWFDGV 171 Query: 162 E-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220 E LF+++VSNPPY+E +VR F+P +L GL+ I +L Sbjct: 172 EDKLFNLLVSNPPYVEEGDAHLSEGDVR-FEPLEALVAADRGLADLDHIVKSSPNYLQTR 230 Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRV 259 G +E G++Q V + R V +D G +R+ Sbjct: 231 GWLLLEHGFDQAPAVRELLVRRGFKGVETRQDLAGQERI 269 >gi|94496667|ref|ZP_01303243.1| protein chain release factors methylase subunit [Sphingomonas sp. SKA58] gi|94424027|gb|EAT09052.1| protein chain release factors methylase subunit [Sphingomonas sp. SKA58] Length = 244 Score = 125 bits (313), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 78/226 (34%), Positives = 124/226 (54%), Gaps = 14/226 (6%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101 I R E + I+G RDF+ + L ++ DT PRP++E L+++A+ + + + Sbjct: 29 IARRAAGEPVAHIIGMRDFWTITLAVTPDTLIPRPDSETLIEAAVDY----FGAQGPQTV 84 Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 LDLGTG+GA+ LA L + P +G+G+D S AL +A+ NA + R + DW + V Sbjct: 85 LDLGTGSGALLLAALAQWPQARGLGIDASAGALLVARGNAARLDLDARAEFRAGDWATGV 144 Query: 162 EGLFDVIVSNPPYI---ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 EG+FD+++ NPPYI E + D L +P +L G+DGL YR IA + R + Sbjct: 145 EGVFDLLLINPPYIGVDEPLSGDVL------REPASALFAGVDGLDDYRRIAPDLPRLIA 198 Query: 219 KDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 G+ ++EIG+ Q V + ++ L V +D G DR ++ R Sbjct: 199 PGGMAAIEIGHRQGDSVGALVAAQGLN-VAIRRDLAGLDRCVIATR 243 >gi|222053789|ref|YP_002536151.1| modification methylase, HemK family [Geobacter sp. FRC-32] gi|221563078|gb|ACM19050.1| modification methylase, HemK family [Geobacter sp. FRC-32] Length = 284 Score = 125 bits (313), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 89/257 (34%), Positives = 132/257 (51%), Gaps = 10/257 (3%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 +S LC V GL + V+ D L ++ I R + E + ILG ++F + Sbjct: 31 ESEWMLCAVLGLDRMGLYVNFDKPLTPKELADYRGMIARRGRREPLQYILGSQEFMGLDF 90 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 ++ PR +TE+LV+ A+ R K ILD+GTG+G + ++L K P Sbjct: 91 AVAPAVLIPRHDTEVLVNEAVK----RAGKTS--SILDVGTGSGCISISLAKALPGAIIT 144 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLG 184 GVD S AL +A+ N T+GV+ + L F V+G F ++VSNPPYI S + L Sbjct: 145 GVDTSVDALAVAEKNCNTHGVAVKL--LHGSLFEPVQGQQFHMVVSNPPYIPSDDLKTLQ 202 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI-FESRK 243 EVRD++P +LDGG DGL YR I + +L G +E+G Q V ++ F++ K Sbjct: 203 PEVRDYEPAGALDGGKDGLDFYRQIVAAATDYLVCGGWLLLEVGIGQAEQVRKLFFDNGK 262 Query: 244 LFLVNAFKDYGGNDRVL 260 V A KD +RV+ Sbjct: 263 FAEVFAAKDTADIERVV 279 >gi|325847860|ref|ZP_08170082.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|325480878|gb|EGC83931.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 263 Score = 125 bits (313), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 77/209 (36%), Positives = 121/209 (57%), Gaps = 8/209 (3%) Query: 55 LGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLA 114 +G +FY + L + PR ETE+LVD + + K+D +ILD+G+G+GA+ LA Sbjct: 62 IGKWNFYGLDLLVDKRALIPRYETEILVDMIINDKV----KKD--KILDIGSGSGAISLA 115 Query: 115 LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174 L K +G+DIS A+ ++K N N + + +SD FS+VEG FD+IVSNPPY Sbjct: 116 LSYNLKNSKVLGIDISKDAINLSKENK-KNLSIKNVEFKESDIFSNVEGKFDIIVSNPPY 174 Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234 I + L ++ ++P+ +L GG DGL YR I + LNK+G +EIGY+QK Sbjct: 175 INKEDFENLDKKLS-YEPQNALLGGDDGLFFYRKIILNAKKFLNKNGKIYLEIGYDQKNP 233 Query: 235 VVRIFESRKLFLVNAFKDYGGNDRVLLFC 263 ++ + + + A+KD+ DR+++ C Sbjct: 234 IINLLKEEGYKDIRAYKDFNDFDRIIIAC 262 >gi|295677814|ref|YP_003606338.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Burkholderia sp. CCGE1002] gi|295437657|gb|ADG16827.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Burkholderia sp. CCGE1002] Length = 295 Score = 125 bits (313), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 88/262 (33%), Positives = 128/262 (48%), Gaps = 15/262 (5%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 ++ L V G Q+I + L+ R + E + +++G R+F+ + Sbjct: 31 EARILLTHVLGWRRTQLITRSEEPLERASVECYRALEARRMAGEPVAQLVGAREFFGLEF 90 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 ++ PRPETELLV++ALA IE R R+LDLGTGTGA+ +A+ P Sbjct: 91 EVTPHVLIPRPETELLVETALAA----IEARPRPRVLDLGTGTGAIAVAIASMRPEAHVW 146 Query: 126 GVDISCKALEIAKSN------AVTNGVSERFDTLQSDWFSSVEGL--FDVIVSNPPYIES 177 +D S AL +A N A G + F L SDW+ S++ FD IVSNPPYI S Sbjct: 147 ALDRSADALAVAARNGARLLDAKRPGGAVTF--LHSDWYGSLDTALRFDAIVSNPPYIAS 204 Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237 ++R F+PR +L DGLS R I G L DG+ +E GY+Q V Sbjct: 205 GDPHLAEGDLR-FEPRGALTDEADGLSAIRAIIAGAPERLAADGVLWIEHGYDQAEAVRA 263 Query: 238 IFESRKLFLVNAFKDYGGNDRV 259 + +R V + +D G +R+ Sbjct: 264 LLGARGFAEVRSERDLAGIERI 285 >gi|37525988|ref|NP_929332.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Photorhabdus luminescens subsp. laumondii TTO1] gi|36785418|emb|CAE14364.1| Protein methyltranferase HemK (Protein-glutamine N-methyltransferase) [Photorhabdus luminescens subsp. laumondii TTO1] Length = 282 Score = 125 bits (313), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 95/258 (36%), Positives = 135/258 (52%), Gaps = 12/258 (4%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 RD+ L VT S ++ ++ L Q L + R +K E I I G R+F+++ Sbjct: 22 RDAEILLGFVTHHSRTYLLAFGETQLAPEQFSQLEALLARRVKGEPIAYITGEREFWSLP 81 Query: 65 LTLSSDTFEPRPETELLVDSALA-FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 L +S T PRP+TE LV+ AL SL RILDLGTGTGA+ LA+ E P + Sbjct: 82 LNVSPATLIPRPDTECLVEKALERLSL------TPCRILDLGTGTGAIALAIASERPDCR 135 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDC 182 GVDI+ A+ +A+ NA + + D L S+WF S+ F +IVSNPPYI+ Sbjct: 136 VTGVDINPDAVMLAQGNAEKLKI-QNVDFLLSNWFFSLNNQQFGMIVSNPPYIDETDPHL 194 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH-LNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P +L G++ TI D +SRH L G +E G+ Q + +F Sbjct: 195 SQGDVR-FEPDSALIAAKQGIADLNTIID-LSRHFLLPGGWLLLEHGWKQGNVIRSLFSE 252 Query: 242 RKLFLVNAFKDYGGNDRV 259 V F+DYGGN+R+ Sbjct: 253 SGYRQVATFQDYGGNERI 270 >gi|225677173|ref|ZP_03788171.1| modification methylase, HemK family [Wolbachia endosymbiont of Muscidifurax uniraptor] gi|225590797|gb|EEH12026.1| modification methylase, HemK family [Wolbachia endosymbiont of Muscidifurax uniraptor] Length = 279 Score = 125 bits (313), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 80/260 (30%), Positives = 140/260 (53%), Gaps = 8/260 (3%) Query: 6 DSHSFLCRVTGLSSHQVIVD-PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 D + V G+ +I++ D V +++ F R+ ++ I +I+G R+F++ Sbjct: 26 DCEIIMQHVLGVERSFIIMNHADQVPMEKELLFWKLTKKRAERY-PISQIIGNREFWSKN 84 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 ++ +PRP++E L+ + L + P ++R ++I D GTGTG + +++L E + G Sbjct: 85 FIVNQHVLDPRPDSETLISTVLKY-YPNKKQR--LKIADFGTGTGCLLISVLSEHEYAVG 141 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184 +G + S +A ++A N + + R S W + G FD+I+SNPPYI+ + L Sbjct: 142 IGFEKSLEAYKVAYQNTKKHDLLSRAKIFPSSW-TECRGSFDLIISNPPYIKRSKLKDLQ 200 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 EV+ +PRI+LDGGIDGL+ Y +I + + L K+G +EIG +Q D+ +I S KL Sbjct: 201 AEVQK-EPRIALDGGIDGLNCYLSIFPILKKCLKKNGFAILEIGEDQN-DIDKIIPSYKL 258 Query: 245 FLVNAFKDYGGNDRVLLFCR 264 D G R ++ + Sbjct: 259 AFQEYVHDLAGMKRCIVMQK 278 >gi|91785344|ref|YP_560550.1| modification methylase HemK [Burkholderia xenovorans LB400] gi|91689298|gb|ABE32498.1| [protein release factor]-glutamine N5-methyltransferase [Burkholderia xenovorans LB400] Length = 286 Score = 125 bits (313), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 88/262 (33%), Positives = 132/262 (50%), Gaps = 15/262 (5%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDR--QRFFLTNAIVRSLKHESIHRILGWRDFYNV 63 ++ L V G Q+I D L +R+ A R E + +++G R+F+ + Sbjct: 25 EARILLTHVLGWRPTQLITRSDEPLGAELVERYRALEA--RRAAGEPVAQLVGAREFFGL 82 Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 ++ PRPETELLV++ALA +E R+LDLGTGTGA+ +A+ P + Sbjct: 83 DFEVTPHVLIPRPETELLVETALAA----LENLSRPRVLDLGTGTGAIAVAIASMRPDAQ 138 Query: 124 GVGVDISCKALEIAKSNAVTNGVSER----FDTLQSDWFSSVEGL--FDVIVSNPPYIES 177 +D S +AL +A NA ++R QSDW+ S++ FDVIVSNPPYI S Sbjct: 139 VWALDHSAEALAVATRNAARLLDAKRPGGAVALTQSDWYDSLDAALRFDVIVSNPPYIAS 198 Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237 ++R F+PR +L DGLS R I G L G+ +E GY+Q V + Sbjct: 199 GDPHLAQGDLR-FEPRGALTDEADGLSAIRAIIAGAPTRLAAGGVLWIEHGYDQAEAVRK 257 Query: 238 IFESRKLFLVNAFKDYGGNDRV 259 + +R V + +D G +R+ Sbjct: 258 LLTARGFTQVRSERDLAGIERI 279 >gi|330828703|ref|YP_004391655.1| protein-(glutamine-N5) methyltransferase [Aeromonas veronii B565] gi|328803839|gb|AEB49038.1| Protein-(Glutamine-N5) methyltransferase, release factor-specific [Aeromonas veronii B565] Length = 283 Score = 125 bits (313), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 89/263 (33%), Positives = 127/263 (48%), Gaps = 15/263 (5%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ LC + G ++ P+ LD Q+ L + R L E I ++G R+F+++ L Sbjct: 23 DADVLLCHLLGCRRSYLMTWPEHELDAAQQATLQGWLARRLNGEPIAHLVGEREFWSLPL 82 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 +S T PRP+TE+LV+ AL RI + +LDLGTGTGA+ LAL E P Sbjct: 83 KVSPATLIPRPDTEVLVEQALT----RIPQGPCA-VLDLGTGTGAIALALKSERPEIDVW 137 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-------EGLFDVIVSNPPYIESV 178 VD A +A+ N+V G+ + WF + F VIVSNPPYI+ Sbjct: 138 AVDRMADAAALARENSVALGLP--IEVRDGSWFEPLGEPDRDETPRFAVIVSNPPYIDGA 195 Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238 +VR F+PR +L GL+ R I +L DG +E G++Q V ++ Sbjct: 196 DPHLEQGDVR-FEPRSALVADDAGLADIRHIVAHAPAYLLADGWLLLEHGWDQGEAVRQL 254 Query: 239 FESRKLFLVNAFKDYGGNDRVLL 261 V +DYG NDRV L Sbjct: 255 LRDGGYREVATVRDYGDNDRVTL 277 >gi|197249709|ref|YP_002146254.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197213412|gb|ACH50809.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Salmonella enterica subsp. enterica serovar Agona str. SL483] Length = 277 Score = 125 bits (313), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 94/256 (36%), Positives = 133/256 (51%), Gaps = 8/256 (3%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 RD+ L VTG ++ ++ L D Q+ L + + R + E I + G R+F+++ Sbjct: 22 RDAEILLEYVTGKGRTYIMAFGETPLTDVQQQQLADLLQRRKQGEPIAYLTGLREFWSLP 81 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L +S T PRP+TE LV+ ALA LP RILDLGTGTGA+ LAL E P + Sbjct: 82 LFVSPATLIPRPDTECLVEQALA-QLP----VKTCRILDLGTGTGAIALALACERPDCEV 136 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183 VD A+ +A NA + LQS WFS++ G FD+IVSNPPYI++ Sbjct: 137 TAVDRMPDAVALAIRNAEHLAI-RNVRILQSCWFSALSGQQFDMIVSNPPYIDAQDPHLS 195 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 +VR F+PR +L +G++ I D + L G +E G+ Q V +F Sbjct: 196 EGDVR-FEPRSALVADENGMADLTHIIDNARQMLTPGGFLLLEHGWQQGEAVRAVFRRSG 254 Query: 244 LFLVNAFKDYGGNDRV 259 V +DYGGN+RV Sbjct: 255 YMDVETCRDYGGNERV 270 >gi|332360426|gb|EGJ38237.1| protein-(glutamine-N5) methyltransferase [Streptococcus sanguinis SK355] Length = 276 Score = 125 bits (313), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 77/218 (35%), Positives = 115/218 (52%), Gaps = 12/218 (5%) Query: 46 LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLG 105 L H+ I+G DF+ + L + PRPETE LV+ L+ + + +LD+G Sbjct: 63 LAHKPAQYIIGSSDFHGLTLKVDERVLIPRPETEELVELILSEN-----PESSLSVLDIG 117 Query: 106 TGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF 165 TG+GA+ LAL P ++ D+S AL +A NA G++ F +QSD +++G F Sbjct: 118 TGSGAIALALANSRPDWQITASDLSEDALSLAAENAQNCGLNPTF--VQSDCLDTIQGKF 175 Query: 166 DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225 D+IVSNPPYI D +GL V +P ++L DG + YR IA+ +L + G + Sbjct: 176 DIIVSNPPYISEADKDEVGLNVLTSEPNMALFAEEDGYAVYRKIAEQAGGYLTEKGKIYL 235 Query: 226 EIGYNQKVDVVRIFESRKLFL---VNAFKDYGGNDRVL 260 EIGY Q V + +K F + KD G DR++ Sbjct: 236 EIGYKQGEGVAELL--KKFFPHKRIRVLKDQFGKDRMV 271 >gi|322374350|ref|ZP_08048864.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptococcus sp. C300] gi|321279850|gb|EFX56889.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptococcus sp. C300] Length = 278 Score = 125 bits (313), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 86/260 (33%), Positives = 131/260 (50%), Gaps = 13/260 (5%) Query: 6 DSHSFLCR-VTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 +S SF+ R + LS + + + ++ F+ + H+ I+G DF+ ++ Sbjct: 22 ESLSFVYRSLKNLSFTDFVFALQQEVTEAEKQFVEEIFQQLASHKPAQYIIGQADFFGMQ 81 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L + PRPETE LV+ LA + D +++LD+GTG+GA+ L L K P + Sbjct: 82 LKVDERVLIPRPETEELVELILAEN-----PEDKLKVLDIGTGSGAIALGLAKNRPDWSV 136 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184 DIS ALE+A NA ++ F +SD F+ + +D+IVSNPPYI +G Sbjct: 137 TAADISQDALELASENARNQNLNIFFK--KSDCFAEISEKYDIIVSNPPYISREDESEVG 194 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 L V +P ++L DGL+ YR IA+ +L G +EIGY Q V +F RK Sbjct: 195 LNVLHSEPHLALFADEDGLAIYRRIAEDAKDYLTDGGKIYLEIGYKQGQSVPALF--RKY 252 Query: 245 F---LVNAFKDYGGNDRVLL 261 V KD G DR+++ Sbjct: 253 LPEKRVRTLKDQFGQDRMVV 272 >gi|226940812|ref|YP_002795886.1| HemK1 [Laribacter hongkongensis HLHK9] gi|226715739|gb|ACO74877.1| HemK1 [Laribacter hongkongensis HLHK9] Length = 276 Score = 125 bits (313), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 88/258 (34%), Positives = 130/258 (50%), Gaps = 15/258 (5%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDR--QRFFLTNAIVRSLKHESIHRILGWRDFYNV 63 D+H L + +GLS + I P+ + + QRF A R L E + +LG R+F+ Sbjct: 19 DAHLLLEQASGLSRTRQITWPEQEVPEETAQRFLALAA--RRLAGEPVAYLLGVREFFGR 76 Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 ++ DT PRPETE LV+ AL P R+LDLGTG+GA+ + + E P + Sbjct: 77 DFRVTPDTLIPRPETEHLVEFALTHLPP------AGRMLDLGTGSGAIAVTVACERPDAR 130 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVD 181 +D+S AL +A+SN R+ L+SDWFS++ E F++IVSNPPYI + Sbjct: 131 VTALDVSAAALAVARSNGQHLQAQVRW--LESDWFSALPAEERFELIVSNPPYIAAGDPH 188 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 ++R F+P +L DGL + +A + G +VE GY+Q +F Sbjct: 189 LEQGDLR-FEPASALTDFADGLEALQVLATQACHFVTPGGWLAVEHGYDQGKACRALFAG 247 Query: 242 RKLFLVNAFKDYGGNDRV 259 V+ D G DRV Sbjct: 248 AGWLSVSTLPDLAGLDRV 265 >gi|149174662|ref|ZP_01853287.1| hemK protein [Planctomyces maris DSM 8797] gi|148846356|gb|EDL60694.1| hemK protein [Planctomyces maris DSM 8797] Length = 309 Score = 125 bits (313), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 80/263 (30%), Positives = 128/263 (48%), Gaps = 15/263 (5%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L ++ + + V+ +++R + + R E + ++G R+F+ + Sbjct: 47 DTEVLLAHARNCERIRLYTNYEDVVTEQERALMRQLVQRRANSEPVAYLVGNREFFGLDF 106 Query: 66 TLSSDTFEPRPETELLV----DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 + + PRP+TE LV D A + P I LDL TG+G + ++ Sbjct: 107 YVDKNVLVPRPDTETLVIELVDEAQKLTNPFI--------LDLCTGSGCIAISAAANCHN 158 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVI 179 K DIS AL IA+ NA +N +S + L SD F + LFD+IVSNPPYI Sbjct: 159 AKFQATDISEPALAIAQKNAASNELSNQIQFLLSDCFEQIPPGTLFDIIVSNPPYIPDAE 218 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 ++ L +VR +PR++L GG DGL YR I R+L GL +E Q+ D++ +F Sbjct: 219 IEQLEKDVRQHEPRLALSGGKDGLDFYRKIIQEAGRYLKDQGLLMLEFSPEQEADLLALF 278 Query: 240 ESRKLFL-VNAFKDYGGNDRVLL 261 ++ + V D G RV++ Sbjct: 279 KATGEYTNVRVKADLAGRARVII 301 >gi|184158673|ref|YP_001847012.1| methylase of polypeptide chain release factor [Acinetobacter baumannii ACICU] gi|332874368|ref|ZP_08442279.1| protein-(glutamine-N5) methyltransferase [Acinetobacter baumannii 6014059] gi|183210267|gb|ACC57665.1| Methylase of polypeptide chain release factor [Acinetobacter baumannii ACICU] gi|322507516|gb|ADX02970.1| Methyl transferase [Acinetobacter baumannii 1656-2] gi|323518588|gb|ADX92969.1| methylase of polypeptide chain release factor [Acinetobacter baumannii TCDC-AB0715] gi|332737447|gb|EGJ68363.1| protein-(glutamine-N5) methyltransferase [Acinetobacter baumannii 6014059] Length = 271 Score = 124 bits (312), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 77/217 (35%), Positives = 114/217 (52%), Gaps = 12/217 (5%) Query: 49 ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108 E + + G + F+ + L ++SDT PRP+TE+LV++ L +LP+ I+DLGTGT Sbjct: 63 EPLAYVTGSQPFWTLDLKVTSDTLVPRPDTEVLVETVLNLNLPK-----NANIVDLGTGT 117 Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVE-GLFD 166 GA+ LAL E P + DI L++AK NA T+G+ +F WF ++E FD Sbjct: 118 GAIALALASERPDWFVTATDIYAPTLDVAKENAQTHGLHHVKFAC--GAWFEALEPQQFD 175 Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE 226 +IVSNPPYI+ + ++ +PR +L GL+ I L G ++E Sbjct: 176 LIVSNPPYIDP---EDEHMQALATEPRRALVADHHGLADIEIIIAQGKNWLKPQGWIALE 232 Query: 227 IGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFC 263 GY+Q V +F + +DYG NDRV L C Sbjct: 233 HGYDQGQAVRNVFAEHGFSEIKTIQDYGQNDRVTLAC 269 >gi|156741368|ref|YP_001431497.1| HemK family modification methylase [Roseiflexus castenholzii DSM 13941] gi|156232696|gb|ABU57479.1| modification methylase, HemK family [Roseiflexus castenholzii DSM 13941] Length = 289 Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 83/261 (31%), Positives = 131/261 (50%), Gaps = 12/261 (4%) Query: 6 DSHSFLCRVTGLSSHQVIVD-PDSVLDDRQRFFLTNAIV-RSLKHESIHRILGWRDFYNV 63 D+ L G S +V+ +++ DD + F A+V R E + + G ++FY + Sbjct: 31 DAEILLAHTLGWSRARVLARLQETIPDDALQTF--RALVERRAAREPVAYLTGRKEFYGL 88 Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 + PRPETE LVD+AL ++ D + I D+GTG+G + + L + P Sbjct: 89 EFVVDRRVLVPRPETEALVDAALEWARQHYSPHDTLLIADIGTGSGCIAIVLARHLPNAV 148 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183 D+S AL +A+ NA +GV+ER L D + + D+ VSNPPY I++ + Sbjct: 149 VYATDLSPDALAVARQNAELHGVAERITLLCGDLLAPLPQAVDLAVSNPPY---TILNEI 205 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 VR +P ++LDGG DGL+ YR + + L G +EIG Q V + +R+ Sbjct: 206 DAGVRLHEPHLALDGGSDGLAVYRRLLATAPQALRPGGALMLEIGATQAEAVTAL--ARQ 263 Query: 244 LF---LVNAFKDYGGNDRVLL 261 F V+ +D G DRV++ Sbjct: 264 AFPAAAVHMLRDLAGWDRVVV 284 >gi|253583343|ref|ZP_04860541.1| polypeptide chain release factor methyltransferase HemK [Fusobacterium varium ATCC 27725] gi|251833915|gb|EES62478.1| polypeptide chain release factor methyltransferase HemK [Fusobacterium varium ATCC 27725] Length = 369 Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 79/221 (35%), Positives = 118/221 (53%), Gaps = 6/221 (2%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101 I+R + + +LG +FY + PR +TE+LV+ F L +E ++ Sbjct: 147 ILRGKNRKPLQYLLGEWEFYGYPFKVDERVLIPRSDTEILVEQC-KFILNELENP---KV 202 Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 LD+GTG+GA+ + L KE P +G DIS ALE+A++N N +E ++SD FSS Sbjct: 203 LDIGTGSGAIAVTLGKECPNSVIIGADISEGALEVAEANREMNK-AENVKFMKSDVFSSF 261 Query: 162 EGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220 + + FD I+SNPPYI + L EV ++P +L +G Y I+ S +LNK Sbjct: 262 KDMKFDFIISNPPYIPLEEYNKLMPEVLKYEPSSALTDNGNGYYFYSKISKEASDYLNKG 321 Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 G + E+GYNQ V + E + KDYGG DRV++ Sbjct: 322 GFLAFEVGYNQAETVKELMEENGFDIFAIVKDYGGIDRVVI 362 >gi|257482008|ref|ZP_05636049.1| hemK protein [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 277 Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 80/240 (33%), Positives = 121/240 (50%), Gaps = 7/240 (2%) Query: 26 PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85 P+ ++ + R E + ILG + F+ + L ++ T PRPETE+LV++A Sbjct: 42 PERIVSTEAALAFAGYLQRRCTGEPVAYILGQQGFWKLDLEVAPHTLIPRPETEMLVEAA 101 Query: 86 LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145 L + P ++LDLGTGTGA+ LAL E +K VD +A+ +A+ N Sbjct: 102 LELA-PAFAP---AKVLDLGTGTGAIALALANERQQWKVTAVDRVPEAVALAERNRQRLQ 157 Query: 146 VSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204 + + L S WFS++EG FD+I+SNPPYI +VR F+P +L G DGL Sbjct: 158 L-DNAQVLNSHWFSALEGQQFDLIISNPPYIADADPHLSAGDVR-FEPSSALTAGSDGLD 215 Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 RTI HL+ DG +E GY+Q V + + +D G ++R+ C+ Sbjct: 216 DLRTIIADAPVHLSADGWLLLEHGYDQGPAVRELLIRHGFERIQTRRDLGEHERITFGCK 275 >gi|34499039|ref|NP_903254.1| HemK protein [Chromobacterium violaceum ATCC 12472] gi|34104889|gb|AAQ61246.1| HemK protein [Chromobacterium violaceum ATCC 12472] Length = 254 Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 84/248 (33%), Positives = 122/248 (49%), Gaps = 9/248 (3%) Query: 16 GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75 GL+ ++ P+ L + R L E I +LG R+FY +S PR Sbjct: 9 GLTHATILGHPERELPEETASAFDALAARRLAGEPIAYLLGSREFYGRDFRVSPAVLIPR 68 Query: 76 PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135 PETE LV+ AL+ R+++ R +DLGTG+G + + L E+P + VD+S +AL Sbjct: 69 PETEHLVEQALS----RVDRTMPARAVDLGTGSGIIAITLALEAPDWSLGAVDVSAEALA 124 Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPR 193 +A+ NA + + R D WF + + F++IVSNPPYIE ++R F+PR Sbjct: 125 VARGNA--DALGARVDFRLGSWFGPLDADARFELIVSNPPYIERGDHHLAEGDLR-FEPR 181 Query: 194 ISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDY 253 +L DGL+ R IA G L G VE GY+Q V +F L V D Sbjct: 182 GALTDEADGLACLREIAAGAPGRLADGGWLMVEHGYDQGEAVRGLFADAGLLEVETIVDL 241 Query: 254 GGNDRVLL 261 G DR+ + Sbjct: 242 AGQDRITI 249 >gi|218708756|ref|YP_002416377.1| hypothetical protein VS_0753 [Vibrio splendidus LGP32] gi|218321775|emb|CAV17731.1| Protein hemK homolog [Vibrio splendidus LGP32] Length = 290 Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 90/272 (33%), Positives = 129/272 (47%), Gaps = 25/272 (9%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ LC ++ P+ L Q + R L E + I+G R+F+++ L Sbjct: 29 DATVLLCHALDKPRSYLLTWPEKHLTSEQESEFNTLLKRRLTGEPVAYIVGEREFWSLPL 88 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 +S T PRP+TE LV+ AL + + ILDLGTGTGA+ LAL E P Sbjct: 89 KVSPSTLIPRPDTERLVEVALDKTYGKQGA-----ILDLGTGTGAIALALASEMPNRPVT 143 Query: 126 GVDISCKALEIAKSNA----VTNGVSERFDTLQSDWFSSVEGL--------FDVIVSNPP 173 G+D+ +A ++A NA +TN L WF + + F +IVSNPP Sbjct: 144 GIDLRPEAQQLATENAQRLNITNAT-----FLHGSWFEPLNSVNSEEKAVKFSLIVSNPP 198 Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233 YIE +VR F+P +L GL+ R I++ L +G + E GY+Q + Sbjct: 199 YIEKNDPHLSQGDVR-FEPITALVAEEKGLADIRYISENARSFLENEGWLAFEHGYDQGL 257 Query: 234 DVVRIFESRKLFLVNAFKDYGGNDRVLL--FC 263 V I ++ V KDYGGNDRV L +C Sbjct: 258 AVREIMQALGYLDVVTEKDYGGNDRVTLGRYC 289 >gi|330988604|gb|EGH86707.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Pseudomonas syringae pv. lachrymans str. M301315] Length = 277 Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 79/240 (32%), Positives = 120/240 (50%), Gaps = 7/240 (2%) Query: 26 PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85 P+ ++ + R E + ILG + F+ + L ++ T PRPETE+LV++A Sbjct: 42 PERIVSTEAALAFAGYLQRRRTGEPVAYILGQQGFWKLDLEVAPHTLIPRPETEMLVEAA 101 Query: 86 LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145 L + ++LDLGTGTGA+ LAL E +K VD +A+ +A+ N Sbjct: 102 LEL----VPAFAPAKVLDLGTGTGAIALALANERQQWKVTAVDRVPEAVALAERNRQRLQ 157 Query: 146 VSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204 + + L S WFS++EG FD+I+SNPPYI +VR F+P +L G DGL Sbjct: 158 L-DNAQVLNSHWFSALEGQQFDLIISNPPYIADADPHLSAGDVR-FEPSSALTAGSDGLD 215 Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 RTI HL+ DG +E GY+Q V + + +D G ++R+ C+ Sbjct: 216 DLRTIIADAPVHLSADGWLLLEHGYDQGPAVRELLIRHGFERIQTRRDLGEHERITFGCK 275 >gi|304440461|ref|ZP_07400350.1| protein-(glutamine-N5) methyltransferase [Peptoniphilus duerdenii ATCC BAA-1640] gi|304371213|gb|EFM24830.1| protein-(glutamine-N5) methyltransferase [Peptoniphilus duerdenii ATCC BAA-1640] Length = 267 Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 80/226 (35%), Positives = 125/226 (55%), Gaps = 8/226 (3%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 +S L V +S +I++ + L+ + + + + R E + ILG +FY + + Sbjct: 25 ESRRILMEVLDVSMTYLILNEEQELNKEKEEEIIDILNRRKHGEPLQYILGHSEFYGLDI 84 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 L PRP+TE+ V++ L R++ D + L+LG G+GAV ++ K S K Sbjct: 85 LLKGKVLIPRPDTEVSVENILK----RLKSGD--KFLELGVGSGAVICSVAKNSDA-KCY 137 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185 GVDIS ALE K N + N + + SD F +VEG +D+I SNPPYI+S + L + Sbjct: 138 GVDISEDALECTKLN-IENLNLKNVEVKYSDLFENVEGKYDIIYSNPPYIKSHEILNLQV 196 Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231 E+ D++PR++LDGG DGL Y+ I +LN+ G EIG++Q Sbjct: 197 EITDYEPRLALDGGEDGLDFYKKIISEYRDYLNEGGYLIFEIGHDQ 242 >gi|289627917|ref|ZP_06460871.1| hemK protein [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|320325691|gb|EFW81752.1| hemK protein [Pseudomonas syringae pv. glycinea str. B076] gi|320327390|gb|EFW83404.1| hemK protein [Pseudomonas syringae pv. glycinea str. race 4] gi|330868899|gb|EGH03608.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 277 Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 80/240 (33%), Positives = 121/240 (50%), Gaps = 7/240 (2%) Query: 26 PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85 P+ ++ + R E + ILG + F+ + L ++ T PRPETE+LV++A Sbjct: 42 PERIVSTEAALAFAGYLQRRRTGEPVAYILGQQGFWKLDLEVAPHTLIPRPETEMLVEAA 101 Query: 86 LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145 L + P ++LDLGTGTGA+ LAL E +K VD +A+ +A+ N Sbjct: 102 LELA-PAFAP---AKVLDLGTGTGAIALALANERQQWKVTAVDRVPEAVALAERNRQRLQ 157 Query: 146 VSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204 + + L S WFS++EG FD+I+SNPPYI +VR F+P +L G DGL Sbjct: 158 L-DNAQVLNSHWFSALEGQQFDLIISNPPYIADADPHLSAGDVR-FEPSSALTAGSDGLD 215 Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 RTI HL+ DG +E GY+Q V + + +D G ++R+ C+ Sbjct: 216 DLRTIIADAPVHLSADGWLLLEHGYDQGPAVRELLIRHGFERIQTRRDLGEHERITFGCK 275 >gi|330881881|gb|EGH16030.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Pseudomonas syringae pv. glycinea str. race 4] Length = 277 Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 80/240 (33%), Positives = 121/240 (50%), Gaps = 7/240 (2%) Query: 26 PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85 P+ ++ + R E + ILG + F+ + L ++ T PRPETE+LV++A Sbjct: 42 PERIVSTEAALAFAGYLQRRRTGEPVAYILGQQGFWKLDLEVAPHTLIPRPETEMLVEAA 101 Query: 86 LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145 L + P ++LDLGTGTGA+ LAL E +K VD +A+ +A+ N Sbjct: 102 LELA-PAFAP---AKVLDLGTGTGAIALALANERQQWKVTAVDRVPEAVALAERNRQRLQ 157 Query: 146 VSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204 + + L S WFS++EG FD+I+SNPPYI +VR F+P +L G DGL Sbjct: 158 L-DNAQVLNSHWFSALEGQQFDLIISNPPYIADADPHLSAGDVR-FEPSSALTAGSDGLD 215 Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 RTI HL+ DG +E GY+Q V + + +D G ++R+ C+ Sbjct: 216 DLRTIIADAPVHLSADGWLLLEHGYDQGPAVRELLIRHGFERIQTRRDLGEHERITFGCK 275 >gi|56413304|ref|YP_150379.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197362229|ref|YP_002141866.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|56127561|gb|AAV77067.1| HemK protein, putative protoporphyrinogen oxidase [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197093706|emb|CAR59178.1| HemK protein, putative protoporphyrinogen oxidase [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] Length = 277 Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 94/256 (36%), Positives = 134/256 (52%), Gaps = 8/256 (3%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 RD+ L VTG ++ ++ L D Q+ L + + R + E I + G R+F+++ Sbjct: 22 RDAEILLEYVTGKGRTYIMAFGETPLTDVQQQQLADLLQRRRQGEPIAYLTGLREFWSLP 81 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L +S T PRP+TE LV+ ALA LP RILDLGTGTGA+ LAL E P + Sbjct: 82 LFVSPATLIPRPDTECLVEQALA-RLP----VKTCRILDLGTGTGAIALALACERPDCEV 136 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183 VD A+ +A NA + + LQS WFS++ G FD+IVSNPPYI++ Sbjct: 137 TAVDRMPDAVALAIRNAEHLAI-QNVRILQSCWFSALSGQQFDMIVSNPPYIDAQDPHLS 195 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 +VR F+PR +L +G++ I D + L G +E G+ Q V +F Sbjct: 196 EGDVR-FEPRSALVADENGMADLTHIIDNARQMLTPGGFLLLEHGWQQGEAVRAVFRRSG 254 Query: 244 LFLVNAFKDYGGNDRV 259 V +DYGGN+RV Sbjct: 255 YTDVETCRDYGGNERV 270 >gi|270261429|ref|ZP_06189702.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Serratia odorifera 4Rx13] gi|270044913|gb|EFA18004.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Serratia odorifera 4Rx13] Length = 277 Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 85/258 (32%), Positives = 129/258 (50%), Gaps = 8/258 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A RD+ L VTG + ++ ++VL +++ L + R + E + ++G R+F++ Sbjct: 20 ARRDAEILLGFVTGRARTFLMAFGETVLTPQEQEQLERLLARRERGEPVAYLIGEREFWS 79 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L++S T PRP+TE LV+ AL P ILDLGTGTGA+ LAL E P Sbjct: 80 LPLSVSPATLIPRPDTECLVELALERLPP-----SPCTILDLGTGTGAIALALASERPDC 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181 GVD+ +A+ +A+ NA + LQ WF + G F +I SNPPYI++ Sbjct: 135 AVTGVDLQPEAVALAQHNAQKLAIGNA-QFLQGSWFEPLAGQTFVLIASNPPYIDAADPH 193 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P +L GL+ I +L G +E G+ Q V + ++ Sbjct: 194 LAQGDVR-FEPSSALVAQQHGLADLAAIVQQAPHYLQPQGWLLLEHGWQQGESVRALLQA 252 Query: 242 RKLFLVNAFKDYGGNDRV 259 V +DYG NDRV Sbjct: 253 AGFISVATRRDYGDNDRV 270 >gi|323492376|ref|ZP_08097529.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Vibrio brasiliensis LMG 20546] gi|323313423|gb|EGA66534.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Vibrio brasiliensis LMG 20546] Length = 286 Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 92/259 (35%), Positives = 129/259 (49%), Gaps = 11/259 (4%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ LC ++ PD +L Q + R L E + I+G R+F+++ L Sbjct: 29 DAAVLLCHALDKPRSFLLTWPDKILPSSQLDAFQALLERRLSGEPVAYIVGEREFWSLPL 88 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 +S T PRP+TE LV+ AL +L + ILDLGTGTGA+ LAL E P + Sbjct: 89 KVSPSTLIPRPDTERLVEIALDKAL-----NNQGDILDLGTGTGAIALALASELPQRQIW 143 Query: 126 GVDISCKALEIAKSNAVTNGV-SERFDTLQSDWFSSVE--GLFDVIVSNPPYIESVIVDC 182 GVD+ +A ++A+SNA + + RF L WF ++ F +IVSNPPYIE Sbjct: 144 GVDLKSEAQQLAQSNAKALKLHNTRF--LAGSWFEPIDDGTEFALIVSNPPYIEKEDPHL 201 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 +VR F+P +L GL+ + IA +L K G E GY Q V + S Sbjct: 202 TRGDVR-FEPLSALVADEKGLADIKHIATQARSYLAKQGWLMFEHGYEQGEAVRELLISL 260 Query: 243 KLFLVNAFKDYGGNDRVLL 261 V +KDYG NDRV + Sbjct: 261 GYDQVATYKDYGDNDRVTI 279 >gi|115375811|ref|ZP_01463063.1| methyltransferase, HemK family [Stigmatella aurantiaca DW4/3-1] gi|310822928|ref|YP_003955286.1| hypothetical protein STAUR_5696 [Stigmatella aurantiaca DW4/3-1] gi|115367199|gb|EAU66182.1| methyltransferase, HemK family [Stigmatella aurantiaca DW4/3-1] gi|309396000|gb|ADO73459.1| conserved uncharacterized protein [Stigmatella aurantiaca DW4/3-1] Length = 292 Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 84/241 (34%), Positives = 121/241 (50%), Gaps = 7/241 (2%) Query: 21 QVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETEL 80 ++ VD D L + I R + E + G ++FYN + + PRPETEL Sbjct: 44 RLYVDLDRPLSKEELAAYRALIERRMAGEPTQYLTGAKEFYNRPFKVDARVLIPRPETEL 103 Query: 81 LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140 LV++AL +LP K LD+ G+G + ++L E P + D+S A +A+ N Sbjct: 104 LVEAAL-RALP---KDAPSHALDVCAGSGCIAISLAAERPQTSVLATDLSPGACALAREN 159 Query: 141 AVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG 198 A T GVS R LQ D F+ V + F ++VSNPPYI S + L +EVR +P ++LDG Sbjct: 160 AETLGVSSRVTFLQGDLFAPVPADARFALVVSNPPYIASGEIPGLSVEVRR-EPHLALDG 218 Query: 199 GIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258 G DGL R + G R+L GL ++EIG Q V + + KD DR Sbjct: 219 GRDGLDLIRRVIQGARRYLAPGGLLAMEIGETQGAAVKELLHAAGYSDARVEKDLERRDR 278 Query: 259 V 259 + Sbjct: 279 L 279 >gi|258592987|emb|CBE69298.1| Putative protein methyltransferase hemK modifies release factors RF-1 and RF-2 [NC10 bacterium 'Dutch sediment'] Length = 297 Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 87/276 (31%), Positives = 134/276 (48%), Gaps = 17/276 (6%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ + +G+ Q I+DP+ + + L + + R E + ILG ++F+++ L Sbjct: 16 DAAYLMEAASGIPRWQFILDPEQPIPLDRSGLLESMVSRREAREPVAYILGVKEFWSLLL 75 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-----------VRILDLGTGTGAVCLA 114 +S D PRP+TE LV++AL + + + + I+DLGTG GAV LA Sbjct: 76 AVSPDVLIPRPDTETLVETALDKISVKCQGSETQHSTLNTRHSQLVIVDLGTGCGAVALA 135 Query: 115 LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW---FSSVE--GLFDVIV 169 L E P +D S A IA N T G++ R +Q D F +++ G D+IV Sbjct: 136 LAVELPRALIYAIDRSPGACRIAGRNIDTLGLTNRVRCVQGDLLEPFRTIDAGGGCDLIV 195 Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY 229 SNPPYI S L E+ ++P ++DGG DGL +YR I + +L G E+G Sbjct: 196 SNPPYIPSAACRVLAPEITAYEPVEAIDGGPDGLRYYRRIIEAAPAYLRDGGWLVFEVGD 255 Query: 230 NQKVDVVRIFESRKLF-LVNAFKDYGGNDRVLLFCR 264 Q V+ + + F +D G DRV+ R Sbjct: 256 GQASAVMELIRKTEGFGPAEVRQDMAGRDRVVCAPR 291 >gi|170683182|ref|YP_001743982.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli SMS-3-5] gi|218699919|ref|YP_002407548.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli IAI39] gi|170520900|gb|ACB19078.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli SMS-3-5] gi|218369905|emb|CAR17680.1| N5-glutamine methyltransferase, modifies release factors RF-1 and RF-2 [Escherichia coli IAI39] Length = 277 Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 93/258 (36%), Positives = 128/258 (49%), Gaps = 8/258 (3%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 RD+ L VTG ++ ++ L D Q L + R E I + G R+F+++ Sbjct: 22 RDAEILLAHVTGKGRTFILAFGETQLTDEQCQQLDALLTRRRDGEPIAHLTGVREFWSLP 81 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L +S T PRP+TE LV+ ALA LP RILDLGTGTGA+ LAL E P + Sbjct: 82 LFVSPATLIPRPDTECLVEQALA-RLP----EQPCRILDLGTGTGAIALALASERPDCEI 136 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183 VD A+ +A+ NA N + LQSDWFS++ G F +IVSNPPYI+ Sbjct: 137 TAVDCMPDAVSLAQRNA-QNLAIKNIHILQSDWFSALAGQQFAMIVSNPPYIDEQDPHLQ 195 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 +VR F+P +L G++ I + L G +E G+ Q V + F Sbjct: 196 QGDVR-FEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFIHAG 254 Query: 244 LFLVNAFKDYGGNDRVLL 261 V +DYG N+RV L Sbjct: 255 YHDVETCRDYGDNERVTL 272 >gi|325122702|gb|ADY82225.1| methyl transferase [Acinetobacter calcoaceticus PHEA-2] Length = 271 Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 77/216 (35%), Positives = 112/216 (51%), Gaps = 10/216 (4%) Query: 49 ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108 E + + G + F+ + L ++SDT PRP+TE+LV++ L +LP + I+DLGTGT Sbjct: 63 EPLAYVTGSQPFWTLDLKVTSDTLVPRPDTEILVETVLNLNLP-----NTANIVDLGTGT 117 Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDV 167 GA+ LAL E P + DI LE+AK NA + + +R WF ++E FD+ Sbjct: 118 GAIALALASERPDWFVTATDIYVPTLEVAKENAQVHNL-QRVKFACGAWFDALEPQKFDL 176 Query: 168 IVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227 IVSNPPYI+ + ++ +PR +L GL+ I L G ++E Sbjct: 177 IVSNPPYIDP---EDEHMQALATEPRRALVADHQGLADIEIIIAQGKDWLKPQGWIALEH 233 Query: 228 GYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFC 263 GY+Q V IF + +DYG NDRV L C Sbjct: 234 GYDQGQAVRNIFAEHGFSEIRTIQDYGQNDRVTLAC 269 >gi|148546008|ref|YP_001266110.1| HemK family modification methylase [Pseudomonas putida F1] gi|148510066|gb|ABQ76926.1| modification methylase, HemK family [Pseudomonas putida F1] Length = 276 Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 79/214 (36%), Positives = 114/214 (53%), Gaps = 8/214 (3%) Query: 49 ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108 E + ILG + F+ + L ++ T PRP+TELLV++AL ++ ++LDLGTGT Sbjct: 65 EPVAYILGLQGFWKIDLEVAPHTLIPRPDTELLVETAL-----ELQPASPAKVLDLGTGT 119 Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDV 167 GA+ LAL E P ++ VD +A +A+ N G++ L S WF S+ G FD+ Sbjct: 120 GAIALALASERPAWQVTAVDRVEEAAALAERNRQRLGLANARVRL-SHWFDSLAGERFDL 178 Query: 168 IVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227 IVSNPPYI + + +VR F+P +L G DGL R IA HL G +E Sbjct: 179 IVSNPPYIAAEDPHLVAGDVR-FEPSSALVAGADGLDDLRVIAAQAPAHLLPGGWLLLEH 237 Query: 228 GYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 GY+Q V + V + D GG++R+ L Sbjct: 238 GYDQAAAVRALLAEHGFIEVASRTDLGGHERITL 271 >gi|254373463|ref|ZP_04988951.1| hypothetical protein FTCG_01058 [Francisella tularensis subsp. novicida GA99-3549] gi|151571189|gb|EDN36843.1| hypothetical protein FTCG_01058 [Francisella novicida GA99-3549] Length = 284 Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 86/257 (33%), Positives = 136/257 (52%), Gaps = 10/257 (3%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 D +C V G+ + ++ D LD + I+R L E + ILG++ F+N + Sbjct: 26 HDLQMIICDVLGVDKAYLYINSDKQLDKNTLKKIDEKILRLLAGEPLAYILGYKYFWNQK 85 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALLKESPFFK 123 L ++ DT PR +TE +V A L I+ +D ++ILDLGTGTGA+ LAL E + Sbjct: 86 LYVTKDTLIPRADTETVV----ATVLDDIQNKDAQLKILDLGTGTGAIALALAAELANSQ 141 Query: 124 GVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181 V VD+ ++L++AK NA N ++ +F +QS W+++++ FD+IVSNPPYI+ + Sbjct: 142 VVAVDLYQQSLDVAKKNAQANNITNVKF--IQSSWYTNLDTDKFDIIVSNPPYIDLADTN 199 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 + V+D++P +L +GL+ R I LN G +E G+ Q V +F Sbjct: 200 -IDQSVKDYEPARALFAADNGLADIRIIISQAKDFLNLGGFIYIEHGFTQADAVTALFSQ 258 Query: 242 RKLFLVNAFKDYGGNDR 258 + KD NDR Sbjct: 259 YNFTHIKTVKDLNNNDR 275 >gi|58584543|ref|YP_198116.1| methylase of polypeptide chain release factor [Wolbachia endosymbiont strain TRS of Brugia malayi] gi|58418859|gb|AAW70874.1| Methylase of polypeptide chain release factor [Wolbachia endosymbiont strain TRS of Brugia malayi] Length = 311 Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 81/238 (34%), Positives = 130/238 (54%), Gaps = 7/238 (2%) Query: 27 DSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL 86 D V +++ F R+ ++ I +I+G R+F++ ++ +PR ++E+LV +AL Sbjct: 80 DQVSIKKEQLFWKLTKKRAERY-PISQIIGNREFWSKNFIVNRHVLDPRADSEILVSAAL 138 Query: 87 AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146 + P K+ + I D GTGTG + +++L E GVG + S KA ++A N + + Sbjct: 139 KY-YPN--KKQEMEIADFGTGTGCLLISVLSEYEHAVGVGFEKSLKAYKVACQNMEKHNL 195 Query: 147 SERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206 R S W + +GLFD+I+SNPPYI + L EV+ +P+I+LDGGIDGLS Y Sbjct: 196 LGRAKMFPSSW-TECKGLFDLIISNPPYIRRDKLKDLQAEVQK-EPKIALDGGIDGLSCY 253 Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 +I + R L K+G +EIG +Q D+ +I S +L D G R ++ R Sbjct: 254 LSIFPILKRCLKKNGFAILEIGEDQN-DIDKIVPSYELAFQEYMYDLAGMKRCIVIKR 310 >gi|229522129|ref|ZP_04411546.1| methylase of polypeptide chain release factors [Vibrio cholerae TM 11079-80] gi|229341054|gb|EEO06059.1| methylase of polypeptide chain release factors [Vibrio cholerae TM 11079-80] Length = 286 Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 90/260 (34%), Positives = 129/260 (49%), Gaps = 13/260 (5%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ LC V ++ PD +L+ L + R E + ILG R+F+++ L Sbjct: 27 DAAVLLCHVLAKPRSYLLTWPDKILEKPTLASLELLLARRRAGEPMAYILGEREFWSLSL 86 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV--RILDLGTGTGAVCLALLKESPFFK 123 +S T PRP+TE LV+ AL +K ++ +LDLGTGTGA+ LAL E P + Sbjct: 87 KVSPSTLIPRPDTERLVELAL-------DKAALIDGELLDLGTGTGAIALALASELPTRQ 139 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIESVIVD 181 G+D+ +A E+A+ NA + LQ WFS + F +IVSNPPYIE Sbjct: 140 VTGIDLRPEAAELARENATRLAI-HNAQFLQGSWFSPLADGTKFALIVSNPPYIEENDPH 198 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P+ +L +GL+ R I+ R L G E GY+Q V V I Sbjct: 199 LSLGDVR-FEPKSALVAAENGLADIRHISTHAPRFLLDGGWLLFEHGYDQGVAVRTILRD 257 Query: 242 RKLFLVNAFKDYGGNDRVLL 261 + +DY G+DRV L Sbjct: 258 LGYQNIITEQDYAGHDRVTL 277 >gi|313497100|gb|ADR58466.1| HemK family modification methylase [Pseudomonas putida BIRD-1] Length = 276 Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 79/214 (36%), Positives = 114/214 (53%), Gaps = 8/214 (3%) Query: 49 ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108 E + ILG + F+ + L ++ T PRP+TELLV++AL ++ ++LDLGTGT Sbjct: 65 EPVAYILGLQGFWKIDLEVAPHTLIPRPDTELLVETAL-----ELQPASPAKVLDLGTGT 119 Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDV 167 GA+ LAL E P ++ VD +A +A+ N G++ L S WF S+ G FD+ Sbjct: 120 GAIALALASERPAWQVTAVDRVEEAAALAERNRQRLGLANARVRL-SHWFDSLAGERFDL 178 Query: 168 IVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227 IVSNPPYI + + +VR F+P +L G DGL R IA HL G +E Sbjct: 179 IVSNPPYIAAEDPHLVAGDVR-FEPSSALVAGADGLDDLRVIAAQAPAHLLPGGWLLLEH 237 Query: 228 GYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 GY+Q V + V + D GG++R+ L Sbjct: 238 GYDQAAAVRALLAEHGFIEVASRTDLGGHERITL 271 >gi|283850913|ref|ZP_06368199.1| modification methylase, HemK family [Desulfovibrio sp. FW1012B] gi|283573836|gb|EFC21810.1| modification methylase, HemK family [Desulfovibrio sp. FW1012B] Length = 303 Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 74/221 (33%), Positives = 113/221 (51%), Gaps = 6/221 (2%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101 + R + E + +LG R+FY + ++ DT PRPETEL+VD ALA +V Sbjct: 82 VARRGRGEPVAYLLGEREFYGLDFRVTPDTLIPRPETELIVDRALAL----FPAGNVAAF 137 Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW--FS 159 DLGTG+G + + L + P G+ +D S AL +A+ NA +GV++R +++D+ Sbjct: 138 ADLGTGSGCLAVTLASKFPAAVGLALDRSPNALAVARENAARHGVADRLAFVEADFAALP 197 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 + +G + ++VSNPPY+ EVRDF+P +L G GL +A L Sbjct: 198 ARDGGYGLVVSNPPYVSQAEYGECSREVRDFEPLAALVPGETGLEAVPVVAQAAFDALAP 257 Query: 220 DGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 G VEIG+ Q + I + V +D G DRV+ Sbjct: 258 GGWLLVEIGWKQGGEAADILAASGFADVAVRRDLAGCDRVV 298 >gi|167625122|ref|YP_001675416.1| HemK family modification methylase [Shewanella halifaxensis HAW-EB4] gi|167355144|gb|ABZ77757.1| modification methylase, HemK family [Shewanella halifaxensis HAW-EB4] Length = 280 Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 84/257 (32%), Positives = 130/257 (50%), Gaps = 8/257 (3%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L V + PD L+ Q F + + L+ I I+G R+F+++ Sbjct: 26 DAEVMLLHVINKPRSYLYTWPDRSLEPEQVFEFKQMLAKRLRGNPIAHIVGEREFWSLPF 85 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 ++ T PRP+TE+LV++AL +LP E ++LDLGTGTGA+ L+L E ++ Sbjct: 86 RVNPTTLIPRPDTEILVETAL--NLPLAEN---AKVLDLGTGTGAIALSLAHERNEWQVC 140 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLG 184 +D A+ +AK N N E+ D QSDWF +VE F++IVSNPPYI+ Sbjct: 141 AIDKVEDAVALAKVNR-ANLKLEQVDVFQSDWFDAVECYDFNLIVSNPPYIDEEDEHLSQ 199 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 +VR F+P+ +L + G + IA+ +L G +E GY Q +++ Sbjct: 200 GDVR-FEPQSALTAPLKGFADLFHIAESARDYLAPGGYLLLEHGYQQAIELREKLIELGY 258 Query: 245 FLVNAFKDYGGNDRVLL 261 V +D+G NDR L Sbjct: 259 ENVATVRDFGSNDRCTL 275 >gi|229528815|ref|ZP_04418205.1| methylase of polypeptide chain release factors [Vibrio cholerae 12129(1)] gi|229332589|gb|EEN98075.1| methylase of polypeptide chain release factors [Vibrio cholerae 12129(1)] Length = 286 Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 90/260 (34%), Positives = 129/260 (49%), Gaps = 13/260 (5%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ LC V ++ PD +L+ L + R E + ILG R+F+++ L Sbjct: 27 DAAVLLCHVLAKPRSYLLTWPDKILEKPTLASLELLLARRRAGEPMAYILGEREFWSLPL 86 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV--RILDLGTGTGAVCLALLKESPFFK 123 +S T PRP+TE LV+ AL +K ++ +LDLGTGTGA+ LAL E P + Sbjct: 87 KVSPSTLIPRPDTERLVELAL-------DKAALIDGELLDLGTGTGAIALALASELPTRQ 139 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIESVIVD 181 G+D+ +A E+A+ NA + LQ WFS + F +IVSNPPYIE Sbjct: 140 VTGIDLRPEAAELARENATRLAI-HNAQFLQGSWFSPLADGTKFALIVSNPPYIEENDPH 198 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P+ +L +GL+ R I+ R L G E GY+Q V V I Sbjct: 199 LSLGDVR-FEPKSALVAAENGLADIRHISTHAPRFLLDGGWLLFEHGYDQGVAVRTILRD 257 Query: 242 RKLFLVNAFKDYGGNDRVLL 261 + +DY G+DRV L Sbjct: 258 LGYQNIITEQDYAGHDRVTL 277 >gi|166032747|ref|ZP_02235576.1| hypothetical protein DORFOR_02462 [Dorea formicigenerans ATCC 27755] gi|166027104|gb|EDR45861.1| hypothetical protein DORFOR_02462 [Dorea formicigenerans ATCC 27755] Length = 299 Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 86/261 (32%), Positives = 129/261 (49%), Gaps = 14/261 (5%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L VTG+S +P+ + + + + + + + I G ++F Sbjct: 30 DAWYLLEYVTGISRASYYGNPEKNISEEEAKRYWEYLEKRARRIPLQHITGSQEFMGYEF 89 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK-- 123 ++ PR +TE LV+ AL P + +LD+ TG+G + ++LLK + K Sbjct: 90 LVNEHVLIPRQDTENLVEEALKVIRPDM------HVLDMCTGSGCILISLLKYAAERKHI 143 Query: 124 ----GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179 VG DIS ALE+AK NA V + +QSD F +V FD+IVSNPPYI + + Sbjct: 144 TGGKAVGADISADALEVAKKNAQRLKVPVIW--VQSDIFENVSESFDLIVSNPPYIRTEV 201 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 + L EV+ DP I+LDG DGL YR I HLN EIG++Q DV ++ Sbjct: 202 IQGLEDEVKLHDPWIALDGHEDGLYFYRRIVSESISHLNDGAWLMFEIGHDQAEDVSKLM 261 Query: 240 ESRKLFLVNAFKDYGGNDRVL 260 ++ + KD G DRV+ Sbjct: 262 KNAGFCNIYVKKDLAGLDRVV 282 >gi|323351594|ref|ZP_08087248.1| protein-(glutamine-N5) methyltransferase [Streptococcus sanguinis VMC66] gi|322122080|gb|EFX93806.1| protein-(glutamine-N5) methyltransferase [Streptococcus sanguinis VMC66] Length = 276 Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 77/216 (35%), Positives = 115/216 (53%), Gaps = 8/216 (3%) Query: 46 LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLG 105 L H+ I+G DF+ + L + PRPETE LV+ L+ + + +LD+G Sbjct: 63 LAHKPAQYIIGSSDFHGLTLKVDERVLIPRPETEELVELILSEN-----PESSLSVLDIG 117 Query: 106 TGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF 165 TG+GA+ LAL P ++ D+S AL +A NA ++G++ F +QSD +++G F Sbjct: 118 TGSGAIALALANSRPDWQITASDLSGDALALAAENAQSSGLNLVF--VQSDCLDAIQGKF 175 Query: 166 DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225 D+IVSNPPYI D +GL V +P ++L DG + YR IA+ +L K G + Sbjct: 176 DIIVSNPPYISEADKDEVGLNVLTSEPHMALFAEEDGYAVYRKIAEQAGDYLTKIGKIYL 235 Query: 226 EIGYNQKVDVVRIFESR-KLFLVNAFKDYGGNDRVL 260 EIGY Q V + E + KD G DR++ Sbjct: 236 EIGYKQGDGVRELLEKNFPQKRIRVLKDQFGKDRMV 271 >gi|298485682|ref|ZP_07003761.1| modification methylase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298159708|gb|EFI00750.1| modification methylase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 277 Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 80/240 (33%), Positives = 121/240 (50%), Gaps = 7/240 (2%) Query: 26 PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85 P+ ++ + R E + ILG + F+ + L ++ T PRPETE+LV++A Sbjct: 42 PERIVSTEAALAFAGYLQRRRTGEPVAYILGQQGFWKLDLEVAPHTLIPRPETEMLVEAA 101 Query: 86 LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145 L + P ++LDLGTGTGA+ LAL E +K VD +A+ +A+ N Sbjct: 102 LELA-PAFAP---AKVLDLGTGTGAIALALANERQQWKVTAVDRVPEAVALAERNRQRLQ 157 Query: 146 VSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204 + + L S WFS++EG FD+I+SNPPYI +VR F+P +L G DGL Sbjct: 158 L-DNAHVLNSHWFSALEGRQFDLIISNPPYIADADPHLSAGDVR-FEPSSALTAGSDGLD 215 Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 RTI HL+ DG +E GY+Q V + + +D G ++R+ C+ Sbjct: 216 DLRTIIADAPVHLSADGWLLLEHGYDQGPAVRELLIRHGFERIQTRRDLGEHERITFGCK 275 >gi|317495270|ref|ZP_07953640.1| methyltransferase [Gemella moribillum M424] gi|316914692|gb|EFV36168.1| methyltransferase [Gemella moribillum M424] Length = 280 Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 79/234 (33%), Positives = 132/234 (56%), Gaps = 14/234 (5%) Query: 31 DDRQRFFLTNAIVRSLKHES-IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFS 89 +D Q++F I + +K ++ + ++G+ FY+ + ++SD PR ETE LV + + Sbjct: 49 EDEQKYF--QLINKHIKDDTPLSHLVGFEYFYDRKFKVTSDVLSPRMETEELVYKVIDY- 105 Query: 90 LPRIEKRDV--VRILDLGTGTGAVCLALLKESPFF--KGVGVDISCKALEIAKSNAVTNG 145 I K ++ +++LDL TG+G + + L KE F K + DIS +AL +AK NA + Sbjct: 106 ---IRKNNLTNIKVLDLCTGSGIIGITLKKELEEFDVKILASDISSRALTVAKENASSLE 162 Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSH 205 F ++SD FS+++ FD+IVSNPPYI + V ++DP ++L +G+ Sbjct: 163 ADISF--VESDLFSNIQDKFDIIVSNPPYIAHDDKKTIKENVLNYDPHLALFADEEGMYF 220 Query: 206 YRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRV 259 YR I + +LN+ G+ EIGY+QK ++ + E+ K F +KD G DR+ Sbjct: 221 YRNIIEKSRPYLNEKGIMFFEIGYDQKEKIITLGENNK-FETVVYKDINGRDRI 273 >gi|315222985|ref|ZP_07864864.1| protein-(glutamine-N5) methyltransferase [Streptococcus anginosus F0211] gi|315187935|gb|EFU21671.1| protein-(glutamine-N5) methyltransferase [Streptococcus anginosus F0211] Length = 276 Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 85/260 (32%), Positives = 136/260 (52%), Gaps = 13/260 (5%) Query: 6 DSHSFLCRVT-GLSSHQVI--VDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 +S SF R++ LS Q + + ++ DD + L + L H I+G +F+ Sbjct: 22 ESLSFTFRISKNLSFTQFVLKMQAEATADDIE--LLKKIQSQLLVHRPAQYIIGNAEFHG 79 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + PRPETE LV+ L+ + P +++LD+GTG+GA+ L+L E + Sbjct: 80 HSFKVDERVLIPRPETEELVNLILSEN-PNTN----IKVLDIGTGSGAIALSLATERSNW 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182 + DIS AL++A+ NA V+ D +QSD F ++ G +D+IVSNPPYI + Sbjct: 135 QVTASDISQDALDLAQENAEAIDVA--IDFVQSDCFQAITGKYDIIVSNPPYISETDREE 192 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 +GL V +P ++L DG + YR IA+ +HL + G +EIGY Q V +F+S Sbjct: 193 VGLNVLASEPHLALFAEEDGYAVYRKIAENAQKHLTEKGKIYLEIGYKQGEHVKELFQSA 252 Query: 243 -KLFLVNAFKDYGGNDRVLL 261 + +D G DR+++ Sbjct: 253 FPKMRIRVLQDQFGKDRMVV 272 >gi|261209905|ref|ZP_05924206.1| Polypeptide chain release factor methylase [Vibrio sp. RC341] gi|260841091|gb|EEX67616.1| Polypeptide chain release factor methylase [Vibrio sp. RC341] Length = 286 Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 90/260 (34%), Positives = 127/260 (48%), Gaps = 13/260 (5%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ LC V ++ PD L++ L + R + E I ILG R+F+++ L Sbjct: 27 DAAVLLCHVLAKPRSYLLTWPDKTLEEPALASLDALLARRMAGEPIAYILGEREFWSLPL 86 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV--RILDLGTGTGAVCLALLKESPFFK 123 +S T PRP+TE LV+ AL +K +V +LDLGTGTGA+ LAL E P + Sbjct: 87 KVSPSTLIPRPDTERLVELAL-------DKAALVDGELLDLGTGTGAIALALASELPQRR 139 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIESVIVD 181 G+D+ +A +A+ NA + LQ WFS + F +IVSNPPYIE Sbjct: 140 VTGIDLRPEAAALAQENATRLAI-HNTQFLQGSWFSPLADGTKFALIVSNPPYIEENDPH 198 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P+ +L +GL+ R I+ L G E GY+Q V + Sbjct: 199 LSQGDVR-FEPQSALVAKENGLADIRYISTHAPHFLLDGGWLLFEHGYDQGAAVQMMLRE 257 Query: 242 RKLFLVNAFKDYGGNDRVLL 261 V +DY GNDRV L Sbjct: 258 LGYQNVTTEQDYAGNDRVTL 277 >gi|169795524|ref|YP_001713317.1| methyl transferase [Acinetobacter baumannii AYE] gi|213158535|ref|YP_002319833.1| protein methylase, HemK family [Acinetobacter baumannii AB0057] gi|215483011|ref|YP_002325216.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Acinetobacter baumannii AB307-0294] gi|301344981|ref|ZP_07225722.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Acinetobacter baumannii AB056] gi|301513509|ref|ZP_07238746.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Acinetobacter baumannii AB058] gi|301597422|ref|ZP_07242430.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Acinetobacter baumannii AB059] gi|332850712|ref|ZP_08432959.1| protein-(glutamine-N5) methyltransferase [Acinetobacter baumannii 6013150] gi|332866987|ref|ZP_08437304.1| protein-(glutamine-N5) methyltransferase [Acinetobacter baumannii 6013113] gi|169148451|emb|CAM86317.1| methyl transferase [Acinetobacter baumannii AYE] gi|213057695|gb|ACJ42597.1| protein methylase, HemK family [Acinetobacter baumannii AB0057] gi|213988463|gb|ACJ58762.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Acinetobacter baumannii AB307-0294] gi|332730549|gb|EGJ61865.1| protein-(glutamine-N5) methyltransferase [Acinetobacter baumannii 6013150] gi|332734316|gb|EGJ65444.1| protein-(glutamine-N5) methyltransferase [Acinetobacter baumannii 6013113] Length = 271 Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 78/217 (35%), Positives = 115/217 (52%), Gaps = 12/217 (5%) Query: 49 ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108 E + + G + F+ + L ++SDT PRP+TE+LV++ L +LP+ I+DLGTGT Sbjct: 63 EPLAYVTGSQPFWTLDLKVTSDTLVPRPDTEVLVETVLNLNLPK-----NANIVDLGTGT 117 Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVE-GLFD 166 GA+ LAL E P + DI L++AK NA T+G+ +F WF ++E FD Sbjct: 118 GAIALALASERPDWFVTATDIYAPTLDVAKENAQTHGLHHVKFAC--GAWFEALEPQQFD 175 Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE 226 +IVSNPPYI+ + ++ +PR +L GL+ I L G ++E Sbjct: 176 LIVSNPPYIDP---EDEHMQALATEPRRALVADHHGLADIEIIIAQGKNWLKPQGWIALE 232 Query: 227 IGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFC 263 GY+Q V IF + + +DYG NDRV L C Sbjct: 233 HGYDQGQAVRGIFAEHGFSEIKSIQDYGRNDRVTLAC 269 >gi|32475816|ref|NP_868810.1| hemK protein [Rhodopirellula baltica SH 1] gi|32446359|emb|CAD76187.1| hemK protein [Rhodopirellula baltica SH 1] Length = 296 Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 86/259 (33%), Positives = 130/259 (50%), Gaps = 5/259 (1%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L G ++ D V ++ QR + R + + +++G+R+FY++ + Sbjct: 34 DAEILLAHARGCQRIELYTSFDKVPEEEQRVAFRELVRRRGEGAPVAQLVGYREFYSISI 93 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 + + PRPETE LV A+ R+ R +LD+GTG+GA+ +A+ K P + Sbjct: 94 RVDENVLVPRPETEHLVIEAIDQIKGRLSDRPSPTVLDIGTGSGAIAVAIAKSLPKTQVT 153 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIESVIVDCL 183 VDIS AL+IAK N +S+R LQSD F +E FDVI SNPPYI D L Sbjct: 154 AVDISLTALDIAKWNVENLKLSDRVTLLQSDLFDGLEPDQTFDVICSNPPYISQSEYDEL 213 Query: 184 GLEVRDFDPRISLDGGIDGLSHY-RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 VR+F+PR +L G DG R + D V R LN G +E+ + E Sbjct: 214 PTTVREFEPRGALLSGPDGTEIIARLLNDSVQR-LNDGGQLIIELSPMIAGVSKTLAEQN 272 Query: 243 KLFL-VNAFKDYGGNDRVL 260 + ++ KD G++R+L Sbjct: 273 GGYKEIHLIKDLAGHERIL 291 >gi|306829485|ref|ZP_07462675.1| protein-(glutamine-N5) methyltransferase [Streptococcus mitis ATCC 6249] gi|304428571|gb|EFM31661.1| protein-(glutamine-N5) methyltransferase [Streptococcus mitis ATCC 6249] Length = 278 Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 80/219 (36%), Positives = 114/219 (52%), Gaps = 16/219 (7%) Query: 48 HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTG 107 H+ I+G DF+ ++L + PRPETE LVD L + + ++ILD+GTG Sbjct: 65 HKPAQYIIGQADFFGMQLKVDERVLIPRPETEELVDLILTEN-----PEESLKILDIGTG 119 Query: 108 TGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDV 167 +GA+ LAL K P + DIS ALE+A NA ++ F +SD F+ + +D+ Sbjct: 120 SGAIALALAKNRPDWSVTAADISQVALELASENASNQNLNIFFK--KSDCFAEISEKYDI 177 Query: 168 IVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227 IVSNPPYI +GL V +P ++L DGL+ YR IA+ +L G +EI Sbjct: 178 IVSNPPYISREDESEVGLNVLHSEPHLALFADEDGLAIYRRIAEDAKDYLTDGGKIYLEI 237 Query: 228 GYNQKVDVVRIF-----ESRKLFLVNAFKDYGGNDRVLL 261 GY Q V +F E R V KD G DR+++ Sbjct: 238 GYKQGQSVPALFRKHLPEKR----VRTLKDQFGQDRMVV 272 >gi|227890653|ref|ZP_04008458.1| peptide release factor-glutamine N5-methyltransferase [Lactobacillus salivarius ATCC 11741] gi|227867591|gb|EEJ75012.1| peptide release factor-glutamine N5-methyltransferase [Lactobacillus salivarius ATCC 11741] gi|300214392|gb|ADJ78808.1| Peptide release factor-glutamine N5-methyltransferase [Lactobacillus salivarius CECT 5713] Length = 279 Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 87/259 (33%), Positives = 132/259 (50%), Gaps = 7/259 (2%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 L D +C G + Q++++ + +DD+ L I + + ++G++DFY Sbjct: 23 TLEDVDYLICGQMGWNKTQLLMNYRTRIDDKNYQELQEKIELYNQDYPLQYLIGYQDFYG 82 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 +RL ++ DT PRPETE LVD L + K + +LD+GTGTGA+ LAL + Sbjct: 83 LRLKVTKDTLIPRPETEELVDWILNDN----SKNENYDVLDVGTGTGAIGLALKSIRSNW 138 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182 DIS AL++AK NA + F T SD F +EG D+IVSNPPYI Sbjct: 139 NIFLSDISEPALKVAKENAQNLNLDVSFST--SDLFEKIEGKKDIIVSNPPYISENEKIY 196 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF-ES 241 + V +++P +L +GL Y IA+ + L + +EIG+ Q V +IF +S Sbjct: 197 MDKSVLNYEPHQALFAKNNGLEIYERIANESGKLLKQGSKIYMEIGFLQGKAVKKIFKDS 256 Query: 242 RKLFLVNAFKDYGGNDRVL 260 + KD GNDR++ Sbjct: 257 FPNSEITLKKDINGNDRMI 275 >gi|153213281|ref|ZP_01948693.1| hemK protein [Vibrio cholerae 1587] gi|124116081|gb|EAY34901.1| hemK protein [Vibrio cholerae 1587] Length = 286 Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 90/260 (34%), Positives = 128/260 (49%), Gaps = 13/260 (5%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ LC V ++ PD L+ L + R E + ILG R+F+++ L Sbjct: 27 DAAVLLCHVLAKPRSYLLTWPDKTLEKPTLASLDLLLARRRAGEPMAYILGEREFWSLSL 86 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV--RILDLGTGTGAVCLALLKESPFFK 123 +S T PRP+TE LV+ AL +K ++ +LDLGTGTGA+ LAL E P + Sbjct: 87 KVSPSTLIPRPDTERLVELAL-------DKAALIDGELLDLGTGTGAIALALASELPMRQ 139 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIESVIVD 181 G+D+ +A E+A+ NA + LQ WFS + F +IVSNPPYIE Sbjct: 140 VTGIDLRPEAAELARENATRLAI-HNAQFLQGSWFSPLADGTKFALIVSNPPYIEENDPH 198 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P+ +L +GL+ R I+ R L G E GY+Q V V I Sbjct: 199 LSLGDVR-FEPKSALVAAENGLADIRHISTHAPRFLLDGGWLLFEHGYDQGVAVRTILRD 257 Query: 242 RKLFLVNAFKDYGGNDRVLL 261 + +DY G+DRV L Sbjct: 258 LGYQNIITEQDYAGHDRVTL 277 >gi|254509163|ref|ZP_05121262.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Vibrio parahaemolyticus 16] gi|219547914|gb|EED24940.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Vibrio parahaemolyticus 16] Length = 286 Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 89/258 (34%), Positives = 127/258 (49%), Gaps = 9/258 (3%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ LC ++ PD +LD Q + + R L E + I+G R+F+++ L Sbjct: 29 DAAVLLCHALDKPRSFLLTWPDKLLDAEQLAQFASLLERRLGGEPVAYIVGEREFWSLPL 88 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 ++ T PRP+TE LV+ AL + ILDLGTGTGA+ LAL E P + Sbjct: 89 DVAPSTLIPRPDTERLVEIALDKA-----SDSEGDILDLGTGTGAIALALASELPNRRVW 143 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCL 183 GVD+ A ++A SNA + + WF +E F +IVSNPPYIE Sbjct: 144 GVDLKEDARQLASSNAKKLNIP-NCEFRSGSWFDPIESGTQFALIVSNPPYIEKSDPHLS 202 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 +VR F+P +L +GL+ + I++ HL G E GY+Q + V + S Sbjct: 203 QGDVR-FEPLSALVAEDNGLADIKYISEVARSHLQPGGWLMFEHGYDQGIAVRDLLASLG 261 Query: 244 LFLVNAFKDYGGNDRVLL 261 V FKDYG NDRV + Sbjct: 262 YDQVETFKDYGNNDRVTI 279 >gi|163847181|ref|YP_001635225.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Chloroflexus aurantiacus J-10-fl] gi|222525022|ref|YP_002569493.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Chloroflexus sp. Y-400-fl] gi|163668470|gb|ABY34836.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Chloroflexus aurantiacus J-10-fl] gi|222448901|gb|ACM53167.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Chloroflexus sp. Y-400-fl] Length = 283 Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 80/256 (31%), Positives = 125/256 (48%), Gaps = 6/256 (2%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L + G S +V+ + D VL Q I R E + ++G R+F+ + L Sbjct: 24 DAELLLAHILGWSRAKVVAERDHVLTPEQEMAFNALIERRANREPVAYLIGHREFFGLDL 83 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 + PRPETELLV+ L + R ++ I D+GTG+GA+ +AL P Sbjct: 84 FVDRRVLIPRPETELLVELTLKEA-QRFNHTPLI-IADIGTGSGAIAIALAMHLPHALIY 141 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185 GVDIS AL +A N + +R L+ D + + D++VSNPPY I+ + Sbjct: 142 GVDISPDALAVAAINVTRYRLDDRIRLLEGDLCTPLPAPVDILVSNPPY---TILTEIDE 198 Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF-ESRKL 244 V +P ++LDGG DGL YR + +L +G +EIG Q VV + ++ + Sbjct: 199 GVYRHEPHLALDGGSDGLDCYRRLIAAAPTYLKPNGAILLEIGSTQAASVVHLLRQALPM 258 Query: 245 FLVNAFKDYGGNDRVL 260 +D G+DR++ Sbjct: 259 AETGIERDLAGHDRIV 274 >gi|157376590|ref|YP_001475190.1| HemK family modification methylase [Shewanella sediminis HAW-EB3] gi|157318964|gb|ABV38062.1| modification methylase, HemK family [Shewanella sediminis HAW-EB3] Length = 280 Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 81/237 (34%), Positives = 122/237 (51%), Gaps = 8/237 (3%) Query: 26 PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85 PD L Q + R L I I+G R+F+++ ++ T PRP+TE+LV++A Sbjct: 46 PDERLTSDQVTAFGEMVARRLLGTPIAHIVGEREFWSLPFMVNPTTLIPRPDTEILVETA 105 Query: 86 LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145 L L D R+LDLGTGTGA+ L+L E P ++ VD +A+ +AK+N Sbjct: 106 LNLPL-----ADSARVLDLGTGTGAIALSLAYEKPEWQITAVDKIIEAVALAKANRAHLK 160 Query: 146 VSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204 + + + +QSDWF SV F++IVSNPPYI+ +VR F+P+ +L G +G + Sbjct: 161 LPQ-VEIVQSDWFDSVACYDFNLIVSNPPYIDETDEHLSQGDVR-FEPQSALTAGEEGFA 218 Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 IA +L G +E GY Q + + + V +D+G NDR L Sbjct: 219 DLYHIASCARDYLAPGGYLLLEHGYQQAIQLRKKMIELGYENVATVRDFGSNDRCTL 275 >gi|157962942|ref|YP_001502976.1| HemK family modification methylase [Shewanella pealeana ATCC 700345] gi|157847942|gb|ABV88441.1| modification methylase, HemK family [Shewanella pealeana ATCC 700345] Length = 280 Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 85/257 (33%), Positives = 129/257 (50%), Gaps = 8/257 (3%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L V + PD L+ Q F + + L+ I I+G R+F+++ Sbjct: 26 DAEVMLLHVINKQRSYLYTWPDRSLEPEQVFEFKQMLAKRLRGNPIAHIVGEREFWSLPF 85 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 ++ T PRP+TE+LV++AL +LP E ++LDLGTGTGA+ L+L E ++ Sbjct: 86 RVNPTTLIPRPDTEILVETAL--NLPLAES---AKVLDLGTGTGAIALSLAHERSEWQVC 140 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLG 184 +D A+ +AK N TN E+ D QSDWF +VE F++IVSNPPYI+ Sbjct: 141 AIDKVDDAVALAKENR-TNLKLEQVDVFQSDWFDAVECYDFNLIVSNPPYIDEEDEHLSQ 199 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 +VR F+P +L G + IA+ +L G +E GY Q +++ Sbjct: 200 GDVR-FEPASALTAPQRGFADLFYIAESARDYLAPGGYLLLEHGYQQAIELREKLIELGY 258 Query: 245 FLVNAFKDYGGNDRVLL 261 V +D+G NDR L Sbjct: 259 ENVATVRDFGSNDRCTL 275 >gi|313667605|ref|YP_004047889.1| Hemk protein [Neisseria lactamica ST-640] gi|313005067|emb|CBN86499.1| putative Hemk protein [Neisseria lactamica 020-06] Length = 273 Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 90/240 (37%), Positives = 123/240 (51%), Gaps = 19/240 (7%) Query: 26 PDSVLDDRQRFFLTNAIVRS-LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDS 84 PD V RQR + + +S L E + +LGWR+FY R ++ + PRPETE LV++ Sbjct: 41 PDEV---RQR---ADRLAQSRLNGEPVAYLLGWREFYGRRFAVNPNVLIPRPETEHLVEA 94 Query: 85 ALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN 144 LA LP + R+ DLGTG+GAV + + E P DIS ALE A+ NA Sbjct: 95 VLA-RLP-----ENGRVWDLGTGSGAVAVTVALERPDAFVCASDISPPALETARKNAADL 148 Query: 145 GVSERFDTLQSDWFSS---VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201 G + F WF + EG +D+IVSNPPYIE+ ++R F+P+I+L D Sbjct: 149 GAAVEF--AHGSWFDTDMPSEGKWDIIVSNPPYIENGDEHLSQGDLR-FEPQIALTDFSD 205 Query: 202 GLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 GLS RT+A G L + G +E G++Q V + V D G DRV L Sbjct: 206 GLSCIRTLAQGAPDRLAEGGFLLLEHGFDQGAAVRGVLAENGFSGVETLPDLAGLDRVTL 265 >gi|239628685|ref|ZP_04671716.1| modification methylase [Clostridiales bacterium 1_7_47_FAA] gi|239518831|gb|EEQ58697.1| modification methylase [Clostridiales bacterium 1_7_47FAA] Length = 328 Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 82/264 (31%), Positives = 131/264 (49%), Gaps = 14/264 (5%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFF-----LTNAIVRSLKHESIHRILGWRDF 60 D+ L G S + D L + + F I R + + + G ++F Sbjct: 58 DARYLLLEAFGQSLASFLAVKDKALPEDEETFSKCRKYEEMIDRRAERIPLQHLTGVQEF 117 Query: 61 YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120 ++ PR +TE LV+ L + +K +LD+ TG+G + ++L Sbjct: 118 MGFEFYVNEHVLIPRQDTETLVELVL-----KEQKGKDAALLDVCTGSGCIAISLALMGG 172 Query: 121 FFKGVGVDISCKALEIAKSNA--VTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIE 176 + +D+S +AL +A NA + F+ ++SD F +E +D+IVSNPPYI Sbjct: 173 YRDVTALDVSREALAVAARNAQRLLKEHEGEFNLIESDMFERLEPDRRYDIIVSNPPYIP 232 Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236 S ++ L EVRD++PR++LDG DGL+ YR +A+G +HL G +EIG++Q V Sbjct: 233 SHDIEGLEPEVRDYEPRMALDGTADGLAFYRILAEGCRKHLCPGGCVYMEIGFDQGQAVS 292 Query: 237 RIFESRKLFLVNAFKDYGGNDRVL 260 R+FE + V KD G DRV+ Sbjct: 293 RMFEMQGYVQVEVMKDMAGLDRVV 316 >gi|330994787|ref|ZP_08318709.1| methyltransferase [Gluconacetobacter sp. SXCC-1] gi|329758048|gb|EGG74570.1| methyltransferase [Gluconacetobacter sp. SXCC-1] Length = 287 Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 81/232 (34%), Positives = 120/232 (51%), Gaps = 3/232 (1%) Query: 30 LDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFS 89 L D + + R L HE + I G F+++ L +S T PR ++E LV++ L Sbjct: 56 LTDAAHATFIHMLGRRLNHEPMAYITGQAGFWSLDLAVSPATLIPRADSETLVEAVL-HH 114 Query: 90 LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 LP ++ +R+LD+GTGTG + LA+L E G+G DI+ A +A NA N ++ R Sbjct: 115 LP--DRTRALRVLDIGTGTGCLLLAVLAEYGQATGIGTDINPHAARLAAHNAARNALASR 172 Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209 TL +W +V G FD+++SNPPYI + L +V +P +LDGG DGL YR + Sbjct: 173 CVTLCCNWADAVRGPFDLVLSNPPYIPHADLAGLMPDVVAHEPARALDGGPDGLVAYRAL 232 Query: 210 ADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 A + L G +E+G Q V + R L + D GG R L+ Sbjct: 233 AAIMPALLAPGGTAVLELGIGQDRSVPALMRERGLEVAEIRPDLGGIGRALV 284 >gi|312958851|ref|ZP_07773370.1| modification methylase [Pseudomonas fluorescens WH6] gi|311286621|gb|EFQ65183.1| modification methylase [Pseudomonas fluorescens WH6] Length = 276 Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 82/240 (34%), Positives = 124/240 (51%), Gaps = 8/240 (3%) Query: 26 PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85 P+ ++ + R E + ILG + F+ + L ++ T PRP+TELLVD+A Sbjct: 42 PEKIVSSEDALTFAGYLQRRRAGEPVAYILGQQGFWKLDLEVAPHTLIPRPDTELLVDAA 101 Query: 86 LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145 L LP R+LDLGTG+GA+ LAL E P + VD +A+ +A+ N Sbjct: 102 LEL-LPATP----TRVLDLGTGSGAIALALASERPAWHVTAVDRVLEAVALAERNRQRLH 156 Query: 146 VSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204 + L S WFS+++G +D+I+SNPPYI + +VR F+P +L G DGL Sbjct: 157 LHNAM-VLNSHWFSALQGHRYDLIISNPPYIAENDPHLVAGDVR-FEPASALVAGRDGLD 214 Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 R I + HLN G +E GY+Q V + ++ V++ D GG++R+ L R Sbjct: 215 DLRLIINEAPAHLNAGGWLLLEHGYDQAEAVRDLLLTQGFEDVHSRIDLGGHERITLGRR 274 >gi|326559213|gb|EGE09644.1| protein methyltransferase HemK [Moraxella catarrhalis 46P47B1] gi|326576387|gb|EGE26296.1| protein methyltransferase HemK [Moraxella catarrhalis O35E] Length = 295 Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 77/229 (33%), Positives = 125/229 (54%), Gaps = 10/229 (4%) Query: 38 LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFS-----LPR 92 +T I++ + + + G + F+ +++ T PR +TE+LV+ L ++ + + Sbjct: 65 ITAGIMQLSAGKPLAYLTGQQSFWGRHFLVNAHTLIPRADTEILVEIILNYAKAQQKIRQ 124 Query: 93 IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152 + +++V ILDLGTGTG + + L E F + V VDIS +AL++A+ N + ++ R Sbjct: 125 TDNKNLVNILDLGTGTGCIGITLALELEFAQVVLVDISSEALKVAEQN--NHRLNARCQL 182 Query: 153 LQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212 LQS W V G FD+IVSNPPYI+ + L+ +P +L DGL+ R I + Sbjct: 183 LQSHWLQKVSGQFDIIVSNPPYIKENDEHLVNLK---HEPITALVAAEDGLTDIRHIIET 239 Query: 213 VSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 +L GL ++E G++Q V ++ S V +DYGGNDRV L Sbjct: 240 GRAYLKDGGLMAIEHGFDQAEAVRNLYLSSGYLDVYTIQDYGGNDRVTL 288 >gi|325129314|gb|EGC52151.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Neisseria meningitidis OX99.30304] gi|325135296|gb|EGC57917.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Neisseria meningitidis M0579] gi|325201297|gb|ADY96751.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Neisseria meningitidis M01-240149] gi|325208917|gb|ADZ04369.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Neisseria meningitidis NZ-05/33] Length = 273 Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 86/221 (38%), Positives = 114/221 (51%), Gaps = 12/221 (5%) Query: 44 RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103 R L E + ILG R+FY R T++ PRPETE LV++ LA LP + R+ D Sbjct: 54 RRLNGEPVAYILGVREFYGRRFTVNPSVLIPRPETEHLVEAVLA-RLP-----ENGRVWD 107 Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS--- 160 LGTG+GAV + + E P DIS ALE A+ NA G R + WF + Sbjct: 108 LGTGSGAVAVTVALERPDAFVRASDISTPALETARKNAADLGA--RVEFAHGSWFDTDMP 165 Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220 EG +D+IVSNPPYIE+ L ++R F+P+I+L DGLS RT+A G L + Sbjct: 166 SEGKWDIIVSNPPYIENGDKHLLQGDLR-FEPQIALTDFSDGLSCIRTLAQGAPDRLAEG 224 Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 G +E G++Q V + V D G DRV L Sbjct: 225 GFLLLEHGFDQGAAVRGVLAENGFSGVETLPDLAGLDRVTL 265 >gi|168233806|ref|ZP_02658864.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|194470184|ref|ZP_03076168.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194456548|gb|EDX45387.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|205332122|gb|EDZ18886.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] Length = 277 Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 94/256 (36%), Positives = 133/256 (51%), Gaps = 8/256 (3%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 RD+ L VTG ++ ++ L D Q+ L + + R + E I + G R+F+++ Sbjct: 22 RDAEILLEYVTGKGRTYIMAFGETPLTDVQQQQLADLLQRRKQGEPIAYLTGLREFWSLP 81 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L +S T PRP+TE LV+ ALA LP RILDLGTGTGA+ LAL E P + Sbjct: 82 LFVSPATLIPRPDTECLVEQALA-RLP----LKTCRILDLGTGTGAIALALACERPDCEV 136 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183 VD A+ +A NA + LQS WFS++ G FD+IVSNPPYI++ Sbjct: 137 TAVDRMPDAVALAIRNAEHLAI-RNVRILQSCWFSALSGQQFDMIVSNPPYIDAQDPHLS 195 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 +VR F+PR +L +G++ I D + L G +E G+ Q V +F Sbjct: 196 EGDVR-FEPRSALVADENGMADLTHIIDNARQMLTPGGFLLLEHGWQQGEAVRAVFRRSG 254 Query: 244 LFLVNAFKDYGGNDRV 259 V +DYGGN+RV Sbjct: 255 YSDVETCRDYGGNERV 270 >gi|323261019|gb|EGA44614.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] Length = 292 Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 94/256 (36%), Positives = 133/256 (51%), Gaps = 8/256 (3%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 RD+ L VTG ++ ++ L D Q+ L + + R + E I + G R+F+++ Sbjct: 22 RDAEILLEYVTGKGRTYIMAFGETPLTDVQQQQLADLLQRRKQGEPIAYLTGLREFWSLP 81 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L +S T PRP+TE LV+ ALA LP RILDLGTGTGA+ LAL E P + Sbjct: 82 LFVSPATLIPRPDTECLVEQALA-RLP----VKTCRILDLGTGTGAIALALACERPDCEV 136 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183 VD A+ +A NA + LQS WFS++ G FD+IVSNPPYI++ Sbjct: 137 TAVDRMPDAVALAIRNAEHLAI-RNVRILQSCWFSALSGQQFDMIVSNPPYIDAQDPHLS 195 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 +VR F+PR +L +G++ I D + L G +E G+ Q V +F Sbjct: 196 EGDVR-FEPRSALVADENGMADLTHIIDNARQMLTPGGFLLLEHGWQQGEAVRAVFRRSG 254 Query: 244 LFLVNAFKDYGGNDRV 259 V +DYGGN+RV Sbjct: 255 YSDVETCRDYGGNERV 270 >gi|206558778|ref|YP_002229538.1| protein methyltransferase HemK [Burkholderia cenocepacia J2315] gi|198034815|emb|CAR50683.1| protein methyltransferase HemK [Burkholderia cenocepacia J2315] Length = 280 Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 87/262 (33%), Positives = 130/262 (49%), Gaps = 15/262 (5%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDR--QRFFLTNAIVRSLKHESIHRILGWRDFYNV 63 D+ L G + Q+I D+ LD +R+ A R + E + +++G R+F+ Sbjct: 19 DARVLLAHALGWTRTQLITRGDAPLDAAAVERYRALEA--RRVAGEPVAQLVGMREFFGR 76 Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 ++ D PRPETELLV++AL I+ +LDLGTG+GA+ +++ E P + Sbjct: 77 PFDVTPDVLIPRPETELLVEAALDA----IDGLPHAAVLDLGTGSGAIAVSIAAERPDAR 132 Query: 124 GVGVDISCKALEIAKSNAVTNGVSER----FDTLQSDWFSSVEGL--FDVIVSNPPYIES 177 +D S AL +A+ NA ++R LQSDW+++++ FD IVSNPPYI Sbjct: 133 VWALDRSPAALAVAQRNADKLLDAQRPGGPLHWLQSDWYAALDPALAFDAIVSNPPYIAQ 192 Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237 ++R F+PR +L DGLS RTI G HL G +E GY+Q V Sbjct: 193 HDPHLAQGDLR-FEPRGALTDDADGLSAIRTIVAGAGAHLKPGGTLWIEHGYDQAEAVRA 251 Query: 238 IFESRKLFLVNAFKDYGGNDRV 259 I S V + D +R Sbjct: 252 ILVSHGFVAVESLTDLAAIERT 273 >gi|255658856|ref|ZP_05404265.1| protein-(glutamine-N5) methyltransferase [Mitsuokella multacida DSM 20544] gi|260849259|gb|EEX69266.1| protein-(glutamine-N5) methyltransferase [Mitsuokella multacida DSM 20544] Length = 291 Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 75/220 (34%), Positives = 118/220 (53%), Gaps = 9/220 (4%) Query: 50 SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109 + +ILG ++F + +++DT PRP+TE+LV +A+ L + + +R D+GTG+G Sbjct: 74 PVAQILGEKEFMGLTFKVTADTLVPRPDTEILVQAAVD-RLRAMAGEEPLRFADIGTGSG 132 Query: 110 AVCLALLKESPFFKGV---GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-F 165 A+CL++L + G VDIS A +A+ NA + G+++R D + G+ F Sbjct: 133 AICLSVLH---YLSGTVADTVDISPAARAVAEENAASLGLADRITFHTGDLLQPLSGISF 189 Query: 166 DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225 I+SNPPYI + L EVR +P +L GG DGL YR +A+ L G + Sbjct: 190 AAILSNPPYIPEADIAKLAPEVRLKEPHTALSGGQDGLDFYRRLANEAPAMLVPGGFTAF 249 Query: 226 EIGYNQKVDVVRIFESRKLF-LVNAFKDYGGNDRVLLFCR 264 E+G +Q DV + ++ L DY G DRV++ R Sbjct: 250 EVGIHQAGDVADLLKANPLIDRTEILPDYAGIDRVVVGWR 289 >gi|310779237|ref|YP_003967570.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Ilyobacter polytropus DSM 2926] gi|309748560|gb|ADO83222.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Ilyobacter polytropus DSM 2926] Length = 376 Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 77/234 (32%), Positives = 120/234 (51%), Gaps = 10/234 (4%) Query: 31 DDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSL 90 ++ ++ I R+ + + ILG +F+ + + PRPETELLV+ + Sbjct: 146 EEEKKLIKEMIIKRARDKKPLQYILGEEEFFGYKFKVDERVLIPRPETELLVEQCIVLM- 204 Query: 91 PRIEKRDVVR--ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148 DV ILD+G G+GA+ + L K+ P K +GVDIS ALE+A N N V Sbjct: 205 -----SDVKTPFILDIGVGSGAISVTLGKKIPTSKVLGVDISDGALEVANQNKELNNVK- 258 Query: 149 RFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207 ++SD F +V FD+IVSNPPYI L EV+ ++P+++L +GL Y+ Sbjct: 259 NVKFIKSDVFENVSYKEFDMIVSNPPYIPEKEYKILMHEVKKYEPKLALTAEDEGLYFYK 318 Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 I S +L G+ + E+GYNQ V + E + + KDY +R+++ Sbjct: 319 LITKKASDYLKNGGVLAFEVGYNQAQKVKNMMEDNEFENIVIVKDYHQIERIVI 372 >gi|225870518|ref|YP_002746465.1| methyltransferase [Streptococcus equi subsp. equi 4047] gi|225699922|emb|CAW93853.1| putative methyltransferase [Streptococcus equi subsp. equi 4047] Length = 282 Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 88/248 (35%), Positives = 126/248 (50%), Gaps = 19/248 (7%) Query: 17 LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRP 76 L +Q + D L +R FL + +H S I G F ++ L + S PRP Sbjct: 41 LHQNQEVTSEDQAL--LERIFLALS-----QHVSPQYITGRAYFRDLVLAVDSRVLIPRP 93 Query: 77 ETELLVDSALAFSLPRIEKRDVVR--ILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134 ETE LV+ L ++ D R +LD+GTG+GA+ +AL K P ++ DIS AL Sbjct: 94 ETEELVELIL-------KENDATRKSVLDIGTGSGAIAIALKKARPNWQVTASDISADAL 146 Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194 +A SNA+ + V F+ QSD FS + G FD+IVSNPPYI D +GL V +P + Sbjct: 147 SLAYSNALDHHVEIAFE--QSDLFSKLSGQFDIIVSNPPYIAYEDKDEVGLNVYQSEPHL 204 Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDY 253 +L +G S YR I + S +L G EIGY Q + R+ R + KD Sbjct: 205 ALFAAENGFSIYRRIIEQASAYLTTSGKLYFEIGYKQGEGLKRLLSKRFPQKRIRVLKDM 264 Query: 254 GGNDRVLL 261 G +R+++ Sbjct: 265 LGKERMVV 272 >gi|205352557|ref|YP_002226358.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205272338|emb|CAR37218.1| HemK protein, putative protoporphyrinogen oxidase [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|326627617|gb|EGE33960.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 277 Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 94/256 (36%), Positives = 133/256 (51%), Gaps = 8/256 (3%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 RD+ L VTG ++ ++ L D Q+ L + + R + E I + G R+F+++ Sbjct: 22 RDAEILLEYVTGKGRTYIMAFGETPLTDVQQQQLADLLQRRKQGEPIAYLTGLREFWSLP 81 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L +S T PRP+TE LV+ ALA LP RILDLGTGTGA+ LAL E P + Sbjct: 82 LFVSPATLIPRPDTECLVEQALA-RLP----VKTCRILDLGTGTGAIALALACERPDCEV 136 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183 VD A+ +A NA + LQS WFS++ G FD+IVSNPPYI++ Sbjct: 137 TAVDRMPDAVALAIRNAEHLAI-RNVRILQSCWFSALSGQQFDMIVSNPPYIDAQDPHLS 195 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 +VR F+PR +L +G++ I D + L G +E G+ Q V +F Sbjct: 196 EGDVR-FEPRSALVADENGMADLTHIIDNARQMLTPSGFLLLEHGWQQGEAVRAVFRRSG 254 Query: 244 LFLVNAFKDYGGNDRV 259 V +DYGGN+RV Sbjct: 255 YSDVETCRDYGGNERV 270 >gi|170723616|ref|YP_001751304.1| protein-(glutamine-N5) methyltransferase [Pseudomonas putida W619] gi|169761619|gb|ACA74935.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Pseudomonas putida W619] Length = 276 Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 79/237 (33%), Positives = 122/237 (51%), Gaps = 8/237 (3%) Query: 26 PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85 P+ ++ + R E + ILG + F+ + L ++ T PRP+TELLV++A Sbjct: 42 PERIVSSEDAQTYAGYLHRRRSGEPVAYILGQQGFWKLDLEVAPHTLIPRPDTELLVETA 101 Query: 86 LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145 L ++ ++LDLGTGTGA+ LAL E P ++ +D +A+ +A+ N G Sbjct: 102 L-----ELQPATPAKVLDLGTGTGAIALALASECPAWQVTALDRVEEAVALAERNRQRLG 156 Query: 146 VSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204 + L S WFS+++G FD+I+SNPPYI + +VR F+P +L G DGL Sbjct: 157 LGN-VKVLASHWFSALDGERFDLILSNPPYIAAEDPHLAAGDVR-FEPSSALVAGADGLD 214 Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 R I HL G +E GY+Q V + + V + KD GG++R+ L Sbjct: 215 DLRLIVGQAPAHLLPGGWLLLEHGYDQAPAVRALLTGQGFIEVASRKDLGGHERISL 271 >gi|153825564|ref|ZP_01978231.1| hemK protein [Vibrio cholerae MZO-2] gi|149740715|gb|EDM54814.1| hemK protein [Vibrio cholerae MZO-2] Length = 286 Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 90/260 (34%), Positives = 128/260 (49%), Gaps = 13/260 (5%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ LC V ++ PD +L+ L + R E + ILG R+F+++ L Sbjct: 27 DAAVLLCHVLAKPRSYLLTWPDKILEKPTLASLELLLARRRAGEPMAYILGEREFWSLPL 86 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV--RILDLGTGTGAVCLALLKESPFFK 123 +S T PRP+TE LV+ AL +K ++ +LDLGTGTGA+ LAL E P + Sbjct: 87 KVSPSTLIPRPDTERLVELAL-------DKAALIDGELLDLGTGTGAIALALASELPTRQ 139 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIESVIVD 181 G+D+ +A E+A+ NA + LQ WFS + F +IVSNPPYIE Sbjct: 140 VTGIDLRPEAAELARENATRLAI-HNAQFLQGSWFSPLADGTKFALIVSNPPYIEEN-DP 197 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 L L F+P+ +L +GL+ R I+ R L G E GY+Q V V I Sbjct: 198 HLSLGDLRFEPKSALVAAENGLADIRHISTHAPRFLLDGGWLLFEHGYDQGVAVRTILRD 257 Query: 242 RKLFLVNAFKDYGGNDRVLL 261 + +DY G+DRV L Sbjct: 258 LGYQNIITEQDYAGHDRVTL 277 >gi|167553920|ref|ZP_02347663.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|168462749|ref|ZP_02696680.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|195633874|gb|EDX52226.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|205321752|gb|EDZ09591.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] Length = 277 Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 94/256 (36%), Positives = 133/256 (51%), Gaps = 8/256 (3%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 RD+ L VTG ++ ++ L D Q+ L + + R + E I + G R+F+++ Sbjct: 22 RDAEILLEYVTGKGRTYIMAFGETPLTDVQQQQLADLLQRRKQGEPIAYLTGLREFWSLP 81 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L +S T PRP+TE LV+ ALA LP RILDLGTGTGA+ LAL E P + Sbjct: 82 LFVSPATLIPRPDTECLVEQALA-RLP----VKTCRILDLGTGTGAIALALACERPDCEV 136 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183 VD A+ +A NA + LQS WFS++ G FD+IVSNPPYI++ Sbjct: 137 TAVDRMPDAVALAIRNAEHLAI-RNVRILQSCWFSALSGQQFDMIVSNPPYIDAQDPHLS 195 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 +VR F+PR +L +G++ I D + L G +E G+ Q V +F Sbjct: 196 EGDVR-FEPRSALVADENGMADLTHIIDNARQMLTPGGFLLLEHGWQQGEAVRAVFRRSG 254 Query: 244 LFLVNAFKDYGGNDRV 259 V +DYGGN+RV Sbjct: 255 YTDVETCRDYGGNERV 270 >gi|15672580|ref|NP_266754.1| protoporphyrinogen oxidase [Lactococcus lactis subsp. lactis Il1403] gi|281491064|ref|YP_003353044.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Lactococcus lactis subsp. lactis KF147] gi|12723493|gb|AAK04696.1|AE006293_2 protoporphyrinogen oxidase [Lactococcus lactis subsp. lactis Il1403] gi|281374822|gb|ADA64342.1| Protein-(glutamine-N5) methyltransferase, release factor-specific [Lactococcus lactis subsp. lactis KF147] gi|326406099|gb|ADZ63170.1| methylase of polypeptide chain release factor [Lactococcus lactis subsp. lactis CV56] Length = 270 Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 79/230 (34%), Positives = 123/230 (53%), Gaps = 8/230 (3%) Query: 32 DRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLP 91 D++ LT R ++E I+GW +F +++L + PRPETE LV+ LA + Sbjct: 45 DQELKLLTEVSKRLHQNEPPQYIVGWAEFRDLKLKVDERVLIPRPETEELVEMILAEN-- 102 Query: 92 RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151 ++D ++ILD+GTG+GA+ ++L + + DIS +AL +A NA N + F Sbjct: 103 ---EKDSLKILDIGTGSGAIAISLAQARENWSVKASDISKEALTLAAENAEINQANLEF- 158 Query: 152 TLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIAD 211 +QSD + FD+IVSNPPYI + V ++P ++L GL+ Y+ IAD Sbjct: 159 -IQSDVLDKITDSFDIIVSNPPYIAFDETYEMDNSVIKYEPDLALFAENQGLAIYQKIAD 217 Query: 212 GVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDYGGNDRVL 260 HL +G +EIGY Q V IF+ + LV+ +D G DR++ Sbjct: 218 QAVNHLTDNGKIYLEIGYKQGQAVQAIFQEKFTDKLVSIHQDIFGKDRMI 267 >gi|15602421|ref|NP_245493.1| hypothetical protein PM0556 [Pasteurella multocida subsp. multocida str. Pm70] gi|18202825|sp|Q9CN82|HEMK_PASMU RecName: Full=Protein methyltransferase hemK homolog; AltName: Full=M.PmuHemKP gi|12720822|gb|AAK02640.1| HemK [Pasteurella multocida subsp. multocida str. Pm70] Length = 298 Score = 123 bits (309), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 90/267 (33%), Positives = 134/267 (50%), Gaps = 16/267 (5%) Query: 10 FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69 L VT S ++ ++VL + + L ++R K E I ILG + F+++ L +S Sbjct: 33 LLQTVTKRSKASILAFSETVLTEVELQQLAQLLMRRAKGEPIAYILGEKAFWSLSLKVSE 92 Query: 70 DTFEPRPETELLVDSALAFSLPRIEKRDV---VRILDLGTGTG-AVCLALLKESPFFKGV 125 T PRP+TE+LV+ AL F+ R+ V + ILDLGTGTG + +P + Sbjct: 93 HTLIPRPDTEVLVEHALDFAKQRVTSAHVSGELSILDLGTGTGAIALALAAELTPLTQKC 152 Query: 126 GVDIS-------CKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIE 176 G++++ +A+ +AK NA N + F LQS WF ++ E FD+IVSNPPYI+ Sbjct: 153 GINLNILGVDRIAEAVALAKDNAKQNELKVNF--LQSVWFDALNPEIRFDLIVSNPPYID 210 Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236 +VR F+P +L +G + R I + L G +E G+ Q V Sbjct: 211 KNDPHLTQGDVR-FEPLSALVAAEEGYADIRHIIEQAPLFLKPQGALLLEHGWQQAEKVR 269 Query: 237 RIFESRKLFLVNAFKDYGGNDRVLLFC 263 IF+ V KDY GN+RV L C Sbjct: 270 SIFQKNLWHNVATLKDYSGNERVTLGC 296 >gi|16765116|ref|NP_460731.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|62180339|ref|YP_216756.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161613729|ref|YP_001587694.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|167993218|ref|ZP_02574313.1| protein methyltransferase HemK [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168237829|ref|ZP_02662887.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|168820513|ref|ZP_02832513.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194443667|ref|YP_002041025.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194735200|ref|YP_002114805.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197265643|ref|ZP_03165717.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|198245434|ref|YP_002215370.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|207856718|ref|YP_002243369.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|224583735|ref|YP_002637533.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|17865746|sp|P40816|HEMK_SALTY RecName: Full=Protein methyltransferase hemK; AltName: Full=M.StyLTHemKP; AltName: Full=Protein-(glutamine-N(5)) MTase hemK; AltName: Full=Protein-glutamine N-methyltransferase hemK gi|16420305|gb|AAL20690.1| putative protoporphyrinogen oxidase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|62127972|gb|AAX65675.1| putative protoporphyrinogen oxidase [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161363093|gb|ABX66861.1| hypothetical protein SPAB_01454 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194402330|gb|ACF62552.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194710702|gb|ACF89923.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197243898|gb|EDY26518.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197289229|gb|EDY28596.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|197939950|gb|ACH77283.1| protein methyltransferase HemK [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|205328672|gb|EDZ15436.1| protein methyltransferase HemK [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205342641|gb|EDZ29405.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|206708521|emb|CAR32842.1| HemK protein, putative protoporphyrinogen oxidase [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|224468262|gb|ACN46092.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|261246961|emb|CBG24778.1| HemK protein, putative protoporphyrinogen oxidase [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267993723|gb|ACY88608.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301158299|emb|CBW17798.1| HemK protein, putative protoporphyrinogen oxidase [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312912764|dbj|BAJ36738.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|320085724|emb|CBY95502.1| possible protoporphyrinogen oxidase [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|321224403|gb|EFX49466.1| protein-glutamine-N5 methyltransferase, release factor-specific [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|322616771|gb|EFY13679.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322620419|gb|EFY17285.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322625679|gb|EFY22498.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322626129|gb|EFY22939.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322633736|gb|EFY30476.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322638890|gb|EFY35583.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322640873|gb|EFY37522.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322644094|gb|EFY40639.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322649165|gb|EFY45603.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322655324|gb|EFY51632.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322660918|gb|EFY57149.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322662785|gb|EFY58992.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322667969|gb|EFY64128.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322674269|gb|EFY70363.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322678550|gb|EFY74608.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322683209|gb|EFY79225.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322686903|gb|EFY82881.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|322714813|gb|EFZ06384.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] gi|323130045|gb|ADX17475.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|323195207|gb|EFZ80387.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323200202|gb|EFZ85288.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323204530|gb|EFZ89534.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323207353|gb|EFZ92301.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323213948|gb|EFZ98717.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323217338|gb|EGA02057.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323228021|gb|EGA12166.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323231360|gb|EGA15473.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323235800|gb|EGA19879.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323240369|gb|EGA24412.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323245261|gb|EGA29261.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323249066|gb|EGA32986.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323252823|gb|EGA36659.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323254892|gb|EGA38686.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323266734|gb|EGA50220.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323268941|gb|EGA52397.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] gi|326623116|gb|EGE29461.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Dublin str. 3246] gi|332988662|gb|AEF07645.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 277 Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 94/256 (36%), Positives = 133/256 (51%), Gaps = 8/256 (3%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 RD+ L VTG ++ ++ L D Q+ L + + R + E I + G R+F+++ Sbjct: 22 RDAEILLEYVTGKGRTYIMAFGETPLTDVQQQQLADLLQRRKQGEPIAYLTGLREFWSLP 81 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L +S T PRP+TE LV+ ALA LP RILDLGTGTGA+ LAL E P + Sbjct: 82 LFVSPATLIPRPDTECLVEQALA-RLP----VKTCRILDLGTGTGAIALALACERPDCEV 136 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183 VD A+ +A NA + LQS WFS++ G FD+IVSNPPYI++ Sbjct: 137 TAVDRMPDAVALAIRNAEHLAI-RNVRILQSCWFSALSGQQFDMIVSNPPYIDAQDPHLS 195 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 +VR F+PR +L +G++ I D + L G +E G+ Q V +F Sbjct: 196 EGDVR-FEPRSALVADENGMADLTHIIDNARQMLTPGGFLLLEHGWQQGEAVRAVFRRSG 254 Query: 244 LFLVNAFKDYGGNDRV 259 V +DYGGN+RV Sbjct: 255 YSDVETCRDYGGNERV 270 >gi|256545371|ref|ZP_05472734.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Anaerococcus vaginalis ATCC 51170] gi|256398932|gb|EEU12546.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Anaerococcus vaginalis ATCC 51170] Length = 263 Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 74/209 (35%), Positives = 117/209 (55%), Gaps = 8/209 (3%) Query: 55 LGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLA 114 +G +FY + L + PR ETE+LVD + + + +ILD+GTG+GA+ LA Sbjct: 62 IGKWNFYGLDLLVDKRALIPRYETEILVDLIIN------DNSNNKKILDIGTGSGAISLA 115 Query: 115 LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174 L K K +GVDIS A+++A N + ++ + +SD FS++E FD+IVSNPPY Sbjct: 116 LSKNLKDSKIIGVDISKNAIDLANENKIKLNIN-NVEFKESDIFSNIEEKFDIIVSNPPY 174 Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234 I + L ++ ++P+ +L GG DGL Y+ I LNK+G +EIGY+QK Sbjct: 175 INKEDFEKLDNKLY-YEPQNALYGGEDGLYFYKKIIKNAKNFLNKNGKIYLEIGYDQKDY 233 Query: 235 VVRIFESRKLFLVNAFKDYGGNDRVLLFC 263 + + E + ++KD+ DR++ C Sbjct: 234 ISNLLEEYGYKQIKSYKDFNDFDRIIKAC 262 >gi|325131308|gb|EGC54019.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Neisseria meningitidis M6190] gi|325137337|gb|EGC59925.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Neisseria meningitidis ES14902] Length = 273 Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 83/221 (37%), Positives = 114/221 (51%), Gaps = 12/221 (5%) Query: 44 RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103 R L E + +LGWR+FY R ++ + PRPETE LV++ LA LP + R+ D Sbjct: 54 RRLNGEPVAYLLGWREFYGRRFAVNPNVLIPRPETEHLVEAVLA-RLP-----ENGRVWD 107 Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS--- 160 LGTG+GAV + + E P DIS +LE A+ NA G R + WF + Sbjct: 108 LGTGSGAVAVTVALERPDAFVRASDISPPSLETARKNAADLGA--RVEFAHGSWFDTDMP 165 Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220 EG +D+IVSNPPYIE+ ++R F+P+I+L DGLS RT+A G L + Sbjct: 166 SEGKWDIIVSNPPYIENGDKHLSQGDLR-FEPQIALTDFSDGLSCIRTLAQGAPDRLAEG 224 Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 G +E G++Q V + V D G DRV L Sbjct: 225 GFLLLEHGFDQGAAVRGVLAENGFSGVETLPDLAGLDRVTL 265 >gi|330961729|gb|EGH61989.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Pseudomonas syringae pv. maculicola str. ES4326] Length = 277 Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 76/240 (31%), Positives = 122/240 (50%), Gaps = 7/240 (2%) Query: 26 PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85 P+ ++ + R K E + ILG + F+ + L ++ T PRPETE+LV++A Sbjct: 42 PERIVSTEAAVAFAGYLERRRKGEPVAYILGQQGFWKLDLEVAPHTLIPRPETEMLVEAA 101 Query: 86 LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145 L + ++LDLGTGTGA+ LAL E +K VD +A+ +A+ N Sbjct: 102 LEL----VPAFASAQVLDLGTGTGAIGLALANERKQWKVTAVDRVAEAVALAERNRQRLH 157 Query: 146 VSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204 ++ + +S WFS ++G FD+I+SNPPY+ +VR F+P +L G DGL Sbjct: 158 LNNA-EIFESHWFSGLQGRQFDLIISNPPYVPDDDPHLSAGDVR-FEPSSALIAGADGLD 215 Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 R I + HLN +G +E GY+Q V + + + +D G ++R+ C+ Sbjct: 216 DLRAITEQAPAHLNAEGWLLLEHGYDQGAAVRELLIRQGFERIQTRRDLGEHERITFGCK 275 >gi|254804125|ref|YP_003082346.1| heme biosynthesis protein [Neisseria meningitidis alpha14] gi|254667667|emb|CBA03497.1| heme biosynthesis protein [Neisseria meningitidis alpha14] Length = 273 Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 86/221 (38%), Positives = 114/221 (51%), Gaps = 12/221 (5%) Query: 44 RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103 R L E + ILG R+FY R T++ PRPETE LV++ LA LP + R+ D Sbjct: 54 RRLNGEPVAYILGVREFYGRRFTVNPSVLIPRPETEHLVEAVLA-RLP-----ENGRVWD 107 Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS--- 160 LGTG+GAV + + E P DIS ALE A+ NA G R + WF + Sbjct: 108 LGTGSGAVAVTVALERPDAFVRASDISPPALETARKNAADLGA--RVEFAHGSWFDTDMP 165 Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220 EG +D+IVSNPPYIE+ L ++R F+P+I+L DGLS RT+A G L + Sbjct: 166 SEGKWDIIVSNPPYIENGDKHLLQGDLR-FEPQIALTDFSDGLSCIRTLAQGAPDRLAEG 224 Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 G +E G++Q V + V D G DRV L Sbjct: 225 GFLLLEHGFDQGAAVRGVLAENGFSGVETLPDLAGLDRVTL 265 >gi|163815256|ref|ZP_02206633.1| hypothetical protein COPEUT_01416 [Coprococcus eutactus ATCC 27759] gi|158449451|gb|EDP26446.1| hypothetical protein COPEUT_01416 [Coprococcus eutactus ATCC 27759] Length = 284 Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 77/220 (35%), Positives = 115/220 (52%), Gaps = 4/220 (1%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101 I R E + I G ++F S + PR +TE+LV++AL + + DV Sbjct: 61 IRRRCTREPLQYITGVQNFMGYDFCTSENVLIPRQDTEILVETALNLTKSSQKTLDV--- 117 Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT-NGVSERFDTLQSDWFSS 160 LD+ GTG + ++ P K DIS A+ + + N ERFD + +D F Sbjct: 118 LDMCCGTGCIGISYGLLRPDSKVTLADISGDAIRVTRKNVTKLCDEPERFDVINTDLFGD 177 Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220 V+G FD+I+SNPPYI+S +++ L EVRD +PR++LDG DGL YR I +++ + Sbjct: 178 VDGQFDLILSNPPYIKSDVIEALMPEVRDNEPRLALDGKADGLYFYRIIVSQAIKYIKDE 237 Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 G EIG +Q DV +F V+ +D NDRV+ Sbjct: 238 GYVVFEIGNDQAEDVQHLFVDTGYDDVHVVQDLCRNDRVV 277 >gi|118498112|ref|YP_899162.1| HemK family modification methylase [Francisella tularensis subsp. novicida U112] gi|194323338|ref|ZP_03057122.1| methyltransferase, HemK family [Francisella tularensis subsp. novicida FTE] gi|118424018|gb|ABK90408.1| modification methylase, HemK family [Francisella novicida U112] gi|194322702|gb|EDX20182.1| methyltransferase, HemK family [Francisella tularensis subsp. novicida FTE] Length = 284 Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 85/257 (33%), Positives = 136/257 (52%), Gaps = 10/257 (3%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 D +C V G+ + ++ D LD + I+R L E + ILG++ F+N + Sbjct: 26 HDLQMIICDVLGVDKTYLYINSDKQLDKNTLKKIDEKILRLLAGEPLAYILGYKYFWNQK 85 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALLKESPFFK 123 L ++ DT PR +TE +V A L I+ +D ++ILDLGTGTGA+ LAL E + Sbjct: 86 LYVTKDTLIPRADTETVV----ATVLDDIQNKDAQLKILDLGTGTGAIALALAAELANSQ 141 Query: 124 GVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181 V VD+ ++L++AK NA N ++ +F +QS W+++++ FD+IVSNPPYI+ + Sbjct: 142 VVAVDLYQQSLDVAKKNAQANNITNVKF--IQSSWYTNLDTDKFDIIVSNPPYIDLADTN 199 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 + V+D++P +L +GL+ R I LN G +E G+ Q + +F Sbjct: 200 -IDQSVKDYEPARALFAADNGLADIRIIISQAKDFLNLGGFIYIEHGFTQADAITALFSQ 258 Query: 242 RKLFLVNAFKDYGGNDR 258 + KD NDR Sbjct: 259 YNFTDIKTVKDLNNNDR 275 >gi|160916054|ref|ZP_02078261.1| hypothetical protein EUBDOL_02081 [Eubacterium dolichum DSM 3991] gi|158431778|gb|EDP10067.1| hypothetical protein EUBDOL_02081 [Eubacterium dolichum DSM 3991] Length = 284 Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 84/258 (32%), Positives = 130/258 (50%), Gaps = 12/258 (4%) Query: 10 FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69 +L +T +H + ++ D + Q + R ++ E + +LG+ FY R ++ Sbjct: 28 YLLELTNKEAHNLYMEYDEEMPQAQIDEFEAGVERLVEGEPLGHVLGFEWFYGYRFKVNE 87 Query: 70 DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129 D PRPETE LV LA + V +D+GTG+GA+ +AL KE P + DI Sbjct: 88 DVLIPRPETEELVAYILAAYDEYFKDTLNVTAVDVGTGSGAIAVALKKEEPNIHILASDI 147 Query: 130 SCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLE 186 S KA IAK NA N V D L+ +++ D+++SNPPYI S + + Sbjct: 148 SEKACRIAKQNAQDNDVVVEVLCGDMLEPLIERNIK--VDILISNPPYIPS--DEAMEDS 203 Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF- 245 V +++P ++L GG DGL YR I + + L + + E+GYNQK + E+RK F Sbjct: 204 VVNYEPHVALFGGEDGLKFYRIIFEHAKKVLKDKAMMAFEMGYNQKEALSA--EARKYFP 261 Query: 246 --LVNAFKDYGGNDRVLL 261 + KD G +R+L Sbjct: 262 DAKIEVIKDMSGKNRMLF 279 >gi|153828622|ref|ZP_01981289.1| hemK protein [Vibrio cholerae 623-39] gi|148875893|gb|EDL74028.1| hemK protein [Vibrio cholerae 623-39] Length = 286 Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 90/260 (34%), Positives = 128/260 (49%), Gaps = 13/260 (5%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ LC V ++ PD L+ L + R E + ILG R+F+++ L Sbjct: 27 DAAVLLCHVLAKPRSYLLTWPDKTLEKPTLASLELLLARRRAGEPMAYILGEREFWSLPL 86 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV--RILDLGTGTGAVCLALLKESPFFK 123 +S T PRP+TE LV+ AL +K ++ +LDLGTGTGA+ LAL E P + Sbjct: 87 KVSPSTLIPRPDTERLVELAL-------DKAALIDGELLDLGTGTGAIALALASELPTRQ 139 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIESVIVD 181 G+D+ +A E+A+ NA + LQ WFS + F +IVSNPPYIE Sbjct: 140 VTGIDLRPEAAELARENATRLAI-HNAQFLQGSWFSPLADGTKFALIVSNPPYIEENDPH 198 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P+ +L +GL+ R I+ R L G E GY+Q V V I Sbjct: 199 LSLGDVR-FEPKSALVAAENGLADIRHISTHAPRFLLDGGWLLFEHGYDQGVAVRTILRD 257 Query: 242 RKLFLVNAFKDYGGNDRVLL 261 + +DY G+DRV L Sbjct: 258 LGYQNIITEQDYAGHDRVTL 277 >gi|71735390|ref|YP_273269.1| hemK protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|71555943|gb|AAZ35154.1| hemK protein [Pseudomonas syringae pv. phaseolicola 1448A] Length = 277 Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 78/240 (32%), Positives = 120/240 (50%), Gaps = 7/240 (2%) Query: 26 PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85 P+ ++ + R E + ILG + F+ + L ++ T PRPETE+LV++A Sbjct: 42 PERIVSTEAALAFAGYLQRRRTGEPVAYILGQQGFWKLDLEVAPHTLIPRPETEMLVEAA 101 Query: 86 LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145 L + ++LDLGTGTGA+ LAL E +K VD +A+ +A+ N Sbjct: 102 LEL----VPAFAPAKVLDLGTGTGAIALALANERQQWKVTAVDRVPEAVALAERNRQRLQ 157 Query: 146 VSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204 + + L S WF+++EG FD+I+SNPPYI +VR F+P +L G DGL Sbjct: 158 L-DNAQVLNSHWFNALEGQQFDLIISNPPYIADADPHLSAGDVR-FEPSSALTAGSDGLD 215 Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 RTI HL+ DG +E GY+Q V + + +D G ++R+ C+ Sbjct: 216 DLRTIIADAPVHLSADGWLLLEHGYDQGPAVRELLIRHGFERIQTRRDLGEHERITFGCK 275 >gi|322387785|ref|ZP_08061394.1| protein-(glutamine-N5) methyltransferase [Streptococcus infantis ATCC 700779] gi|321141652|gb|EFX37148.1| protein-(glutamine-N5) methyltransferase [Streptococcus infantis ATCC 700779] Length = 278 Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 85/258 (32%), Positives = 134/258 (51%), Gaps = 9/258 (3%) Query: 6 DSHSFLCR-VTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 +S SF+ R + LS + + ++ F+ + H I+G +F+ ++ Sbjct: 22 ESLSFVYRSLKNLSFTDFVFTLQQEATEEEKQFVEEIYKKLAAHIPAQYIIGHAEFFGMQ 81 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L + PR ETE LV+ LA +L +D +++LD+GTG+GA+ LAL K P + Sbjct: 82 LKVDERVLIPRLETEELVELILAENL-----KDNLKVLDIGTGSGAIALALAKNRPDWSV 136 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184 DIS +AL+++ NA ++ F ++SD FS + +D+IVSNPPYI +G Sbjct: 137 TAADISQEALDLSLENANAQNLNLSF--IKSDCFSEISAKYDIIVSNPPYISRADEVEVG 194 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF-ESRK 243 L V +P ++L DGL+ YR IA+ +LN G +EIGY Q V +F E+ Sbjct: 195 LNVLHSEPHLALFADEDGLAIYRRIAEDSKDYLNDGGKIYLEIGYKQGQSVPALFMENFP 254 Query: 244 LFLVNAFKDYGGNDRVLL 261 V KD G DR+++ Sbjct: 255 EKRVRTLKDQFGQDRMVV 272 >gi|325133243|gb|EGC55909.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Neisseria meningitidis M13399] gi|325139388|gb|EGC61928.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Neisseria meningitidis CU385] gi|325201113|gb|ADY96568.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Neisseria meningitidis H44/76] Length = 273 Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 86/221 (38%), Positives = 114/221 (51%), Gaps = 12/221 (5%) Query: 44 RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103 R L E + ILG R+FY R T++ PRPETE LV++ LA LP + R+ D Sbjct: 54 RRLNGEPVAYILGVREFYGRRFTVNPSVLIPRPETEHLVEAVLA-RLP-----ENGRVWD 107 Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS--- 160 LGTG+GAV + + E P DIS ALE A+ NA G R + WF + Sbjct: 108 LGTGSGAVAVTVALERPDAFVRASDISPPALETARKNAADLGA--RVEFAHGSWFDTDMP 165 Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220 EG +D+IVSNPPYIE+ L ++R F+P+I+L DGLS RT+A G L + Sbjct: 166 SEGKWDIIVSNPPYIENGDKHLLQGDLR-FEPQIALTDFSDGLSCIRTLAQGAPDRLAEG 224 Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 G +E G++Q V + V D G DRV L Sbjct: 225 GFLLLEHGFDQGAAVRGVLAENGFSGVETLPDLAGLDRVTL 265 >gi|171319080|ref|ZP_02908204.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Burkholderia ambifaria MEX-5] gi|171095719|gb|EDT40675.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Burkholderia ambifaria MEX-5] Length = 280 Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 86/262 (32%), Positives = 132/262 (50%), Gaps = 15/262 (5%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDR--QRFFLTNAIVRSLKHESIHRILGWRDFYNV 63 D+ L G + Q+I D+ L+ +R+ A R + E + +++G R+F+ Sbjct: 19 DARVLLAHAFGWTRTQLITRGDAPLEPASIERYRALEA--RRVAGEPVAQLVGMREFFGR 76 Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 ++ D PRPETELLV++AL I+ R +LDLGTG+GA+ +++ E P + Sbjct: 77 PFDVTPDVLIPRPETELLVEAALDA----IDGRPHPAVLDLGTGSGAIAVSIAAERPDAR 132 Query: 124 GVGVDISCKALEIAKSNAVTNGVSER----FDTLQSDWFSSVEGL--FDVIVSNPPYIES 177 +D S AL++A+ NA + R LQSDW+++++ FD IVSNPPYI Sbjct: 133 VWALDRSPAALDVARRNADKLLDARRPGGALHWLQSDWYAALDPALAFDTIVSNPPYIAQ 192 Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237 ++R F+PR +L DGLS RTI G +L G +E GY+Q V Sbjct: 193 HDPHLAQGDLR-FEPRGALTDDADGLSAIRTIVAGAGAYLKPGGTLWIEHGYDQAEAVRA 251 Query: 238 IFESRKLFLVNAFKDYGGNDRV 259 + SR V + D +R Sbjct: 252 LLVSRGFVAVESLADLAAIERT 273 >gi|308050534|ref|YP_003914100.1| (protein release factor)-glutamine N5-methyltransferase [Ferrimonas balearica DSM 9799] gi|307632724|gb|ADN77026.1| (protein release factor)-glutamine N5-methyltransferase [Ferrimonas balearica DSM 9799] Length = 279 Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 77/225 (34%), Positives = 116/225 (51%), Gaps = 9/225 (4%) Query: 38 LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97 L + R E + + G R+F+++ L +++ T PRP+TE LV++AL LP D Sbjct: 56 LAGLLARRQAGEPVAHLTGQREFWSLPLKVNATTLIPRPDTESLVEAALELGLP-----D 110 Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 ++DLGTGTGA+ LAL E P ++ VD A+ +A++N + + W Sbjct: 111 DAEVVDLGTGTGAIALALKSEQPGWRISAVDRIADAVALARAN--SEALDLPITVHHGSW 168 Query: 158 FSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216 F + G FD+IVSNPPYI+ +VR F+PR +L GL+ R +A+ + H Sbjct: 169 FEPLSGQRFDLIVSNPPYIDPQDPHLGQGDVR-FEPRSALTADDHGLADIRHLAEAAANH 227 Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 L G+ VE G++Q V IF L V +D G +R L Sbjct: 228 LRAGGVLMVEHGWDQGEAVREIFRQAGLTSVRTGRDLGNRERFTL 272 >gi|114046305|ref|YP_736855.1| HemK family modification methylase [Shewanella sp. MR-7] gi|113887747|gb|ABI41798.1| modification methylase, HemK family [Shewanella sp. MR-7] Length = 286 Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 82/254 (32%), Positives = 128/254 (50%), Gaps = 8/254 (3%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ FL S + P+ L Q + R + + I+G R+F+++ Sbjct: 28 DAEVFLLYCLNKSRAFLYTWPEKALTVEQWKRFQQMVQRRQQGVPVAHIVGEREFWSLPF 87 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 ++ T PRP+TE+LV++AL L ++LDLGTGTGA+ LAL E ++ Sbjct: 88 IVNDTTLIPRPDTEILVETALNLPL-----ESNAKVLDLGTGTGAIALALASERATWQIT 142 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLG 184 VD +A+ +AK+N TN E+ + LQSDWFS+++ FD+IVSNPPYI+ Sbjct: 143 AVDKVEEAVALAKANR-TNLKLEQVEILQSDWFSAIKAHDFDLIVSNPPYIDEADEHLHQ 201 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 +VR F+P+ +L +G + IA +L +G +E G+ Q V + Sbjct: 202 GDVR-FEPQSALTAADEGFADLYYIAKTARDYLKPNGYILLEHGFEQAVKLREKLTELGY 260 Query: 245 FLVNAFKDYGGNDR 258 V +D+G NDR Sbjct: 261 QNVATVRDFGSNDR 274 >gi|261821676|ref|YP_003259782.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Pectobacterium wasabiae WPP163] gi|261605689|gb|ACX88175.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Pectobacterium wasabiae WPP163] Length = 281 Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 91/259 (35%), Positives = 137/259 (52%), Gaps = 10/259 (3%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 RD+ L VTG S V+ ++ L ++ LT + R E I ++G R+F+++ Sbjct: 22 RDAEILLGFVTGKSRTFVLAFGETELRAAEQQQLTELLARRELGEPIAYLIGVREFWSLP 81 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L +S T PRP+TE LV+ AL LP + +LDLGTGTGA+ LA+ E Sbjct: 82 LVVSPATLIPRPDTECLVEQAL-LRLP----KKPCDVLDLGTGTGAIALAIASERHDCLV 136 Query: 125 VGVDISCKALEIAKSNAVTNGV-SERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDC 182 VGVD+ +A+ +A NA + + RF L W+S +E F +I SNPPYI++ V Sbjct: 137 VGVDLQPEAVALATKNAQQLRLDNARF--LPGSWYSPLEHRRFALIASNPPYIDADDVHL 194 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 +VR F+P +L +GL+ R I + +L G +E G+ Q V ++ ++R Sbjct: 195 SQGDVR-FEPASALVAADNGLADLRIIIESAPHYLEVGGWLLLEHGWQQGDAVRQLLQAR 253 Query: 243 KLFLVNAFKDYGGNDRVLL 261 + +DYGGNDRV L Sbjct: 254 GFTQLETCQDYGGNDRVSL 272 >gi|261253597|ref|ZP_05946170.1| Polypeptide chain release factor methylase [Vibrio orientalis CIP 102891] gi|260936988|gb|EEX92977.1| Polypeptide chain release factor methylase [Vibrio orientalis CIP 102891] Length = 286 Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 89/258 (34%), Positives = 128/258 (49%), Gaps = 9/258 (3%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ LC ++ PD +LD +Q + + R L E + I+G R+F+++ L Sbjct: 29 DAAVLLCHALDKPRSFLLTWPDKILDAQQLAAFDDLLQRRLTGEPVAYIVGEREFWSLPL 88 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 +S T PRP+TE LV+ AL ++ + D ILDLGTGTGA+ LAL E P + Sbjct: 89 KVSPTTLIPRPDTERLVEIALDKAM----QMD-GDILDLGTGTGAIALALASELPQRQVT 143 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCL 183 G+D+ A ++A+SNA +S L WF + F +IVSNPPYIE Sbjct: 144 GIDLKQDAQQLAQSNASALNLSNT-QFLAGSWFEPLAAGTEFALIVSNPPYIEKEDPHLT 202 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 +VR F+P +L GL+ + IA +L G E G+ Q V + S Sbjct: 203 QGDVR-FEPLSALVADEKGLADIKHIATQARDYLMDSGWLMFEHGFEQGEPVRELLRSLG 261 Query: 244 LFLVNAFKDYGGNDRVLL 261 V +KDYG NDRV + Sbjct: 262 YDQVATYKDYGDNDRVTI 279 >gi|300939552|ref|ZP_07154209.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS 21-1] gi|300455556|gb|EFK19049.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS 21-1] Length = 277 Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 93/258 (36%), Positives = 128/258 (49%), Gaps = 8/258 (3%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 RD+ L VTG ++ ++ L D Q L + R E I + G R+F+++ Sbjct: 22 RDAEILLEHVTGRGRTFILAFGETQLTDEQCQQLDALLTRRRDGEPIAHLTGVREFWSLP 81 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L +S T PRP+TE LV+ ALA LP RILDLGTGTGA+ LAL E P + Sbjct: 82 LFVSPATLIPRPDTECLVEQALA-RLP----EQPCRILDLGTGTGAIALALASERPDCEI 136 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183 VD A+ +A+ NA N + LQSDWFS++ G F +IVSNPPYI+ Sbjct: 137 TAVDCMPDAVSLAQRNA-QNLAIKNIHILQSDWFSALAGQQFAMIVSNPPYIDEQDPHLQ 195 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 +VR F+P +L G++ I + L G +E G+ Q V + F Sbjct: 196 QGDVR-FEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFIHAG 254 Query: 244 LFLVNAFKDYGGNDRVLL 261 V +DYG N+RV L Sbjct: 255 YHDVETCRDYGDNERVTL 272 >gi|237799728|ref|ZP_04588189.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Pseudomonas syringae pv. oryzae str. 1_6] gi|331022583|gb|EGI02640.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Pseudomonas syringae pv. oryzae str. 1_6] Length = 277 Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 77/240 (32%), Positives = 122/240 (50%), Gaps = 7/240 (2%) Query: 26 PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85 P+ ++ + R E + ILG + F+ + L ++ T PRPETE+LV++A Sbjct: 42 PERIVSTEAALAFAGYLERRRAGEPVAYILGQQGFWKLDLEVAPHTLIPRPETEMLVEAA 101 Query: 86 LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145 L + ++LDLGTGTGA+ LAL E +K VD +A+ +A+ N Sbjct: 102 LEL----VPAFASAQVLDLGTGTGAIALALANERQQWKVTAVDRVPEAVALAERNRKRLH 157 Query: 146 VSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204 + + + L S+WFS+++G FD+I+SNPPYI +VR F+P +L G DGL Sbjct: 158 L-DNAEVLDSNWFSALQGRQFDLIISNPPYIADADPHLAAGDVR-FEPSSALVAGSDGLD 215 Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 R I HLN +G +E GY+Q V + + + +D G ++R+ C+ Sbjct: 216 DLREIIRQAPTHLNAEGWLLLEHGYDQGPAVRELLIRQGFERIQTRRDLGEHERITFGCK 275 >gi|317048555|ref|YP_004116203.1| release factor-specific protein-(glutamine-N5) methyltransferase [Pantoea sp. At-9b] gi|316950172|gb|ADU69647.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Pantoea sp. At-9b] Length = 276 Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 94/262 (35%), Positives = 131/262 (50%), Gaps = 16/262 (6%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 RD+ L VTG S ++ D++LDD Q L + R + E I ++G R+F+++ Sbjct: 22 RDAEILLAFVTGKSRSWLVAFDDALLDDVQLQQLATLLARRAQGEPIAHLVGEREFWSLP 81 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L +S T PRP+TE+LV+ ALA LP ILDLGTGTGA+ LAL E P + Sbjct: 82 LRVSDATLIPRPDTEVLVEQALAH-LPAT----AATILDLGTGTGAIALALASERPDCQV 136 Query: 125 VGVDISCKALEIAKSNA----VTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVI 179 G D A+ +A+ NA +TN S WF+++ FD+I SNPPYI++ Sbjct: 137 TGCDRVEAAVALAQDNAQRLHITN-----VQFFLSHWFAALPSQRFDLIASNPPYIDAAD 191 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 +VR F+P +L GL+ R I L G +E G+ Q V + Sbjct: 192 HHLQQGDVR-FEPLSALVAEEAGLADLREIITTAPAWLLPGGWLLLEHGWQQGEAVRTLM 250 Query: 240 ESRKLFLVNAFKDYGGNDRVLL 261 + VN DYGGN RV L Sbjct: 251 TQQGYQQVNTVDDYGGNPRVTL 272 >gi|189485188|ref|YP_001956129.1| methylase of polypeptide chain release factors [uncultured Termite group 1 bacterium phylotype Rs-D17] gi|170287147|dbj|BAG13668.1| methylase of polypeptide chain release factors [uncultured Termite group 1 bacterium phylotype Rs-D17] Length = 288 Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 77/232 (33%), Positives = 125/232 (53%), Gaps = 7/232 (3%) Query: 30 LDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFS 89 L D Q I+R K E + I+G F + ++ + PRPETE+LV++AL + Sbjct: 53 LTDIQVLQYERYILRRSKREPVAYIMGLAGFMDFEFKVNKNVLIPRPETEILVETALKIA 112 Query: 90 LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 +K + +LDL TG+G + ++L K F + D+S ALEIA+ NA +N V + Sbjct: 113 ----KKENKNSVLDLCTGSGCIAVSLAKLGKFKDIMASDVSGSALEIARENARSNNVLD- 167 Query: 150 FDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208 + ++S+ FS + G FD+I+SNPPY+ D L E++ ++P I+L GL Y+ Sbjct: 168 INFVKSNVFSGISGKNFDIIISNPPYVSHEEYDALEPELK-YEPEIALAADDSGLFFYKK 226 Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 IA R+LN +G +E+ + ++ +IF + + KDY G R+L Sbjct: 227 IAGKAGRYLNDNGFILIELNAYKAGEIKQIFSTCSYKNIEIVKDYAGLPRML 278 >gi|200389878|ref|ZP_03216489.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|199602323|gb|EDZ00869.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Salmonella enterica subsp. enterica serovar Virchow str. SL491] Length = 277 Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 94/256 (36%), Positives = 133/256 (51%), Gaps = 8/256 (3%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 RD+ L VTG ++ ++ L D Q+ L + + R + E I + G R+F+++ Sbjct: 22 RDAEILLEYVTGKGRTYIMAFGETPLTDVQQQQLADLLQRRKQGEPIAYLTGLREFWSLP 81 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L +S T PRP+TE LV+ ALA LP RILDLGTGTGA+ LAL E P + Sbjct: 82 LFVSPATLIPRPDTECLVEQALA-RLP----VKTCRILDLGTGTGAIALALACERPDCEV 136 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183 VD A+ +A NA + LQS WFS++ G FD+IVSNPPYI++ Sbjct: 137 TAVDRMPDAVALAIRNAEHLAI-RNVRILQSCWFSALSGQQFDMIVSNPPYIDAQDPHLS 195 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 +VR F+PR +L +G++ I D + L G +E G+ Q V +F Sbjct: 196 EGDVR-FEPRSALVADENGMADLTHIIDNARQMLTPGGFLLLEHGWRQGEAVRAVFRRSG 254 Query: 244 LFLVNAFKDYGGNDRV 259 V +DYGGN+RV Sbjct: 255 YSDVETCRDYGGNERV 270 >gi|167464537|ref|ZP_02329626.1| modification methylase, HemK family protein [Paenibacillus larvae subsp. larvae BRL-230010] gi|322383118|ref|ZP_08056945.1| glutamine methylase of release factor 1-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321152780|gb|EFX45406.1| glutamine methylase of release factor 1-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 293 Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 81/219 (36%), Positives = 115/219 (52%), Gaps = 5/219 (2%) Query: 44 RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103 R E + ILG +DFY + ++ PRPETELLV+ + + R+ + + D Sbjct: 68 RKAGGEPVQYILGEQDFYGLPFEVNKAVLIPRPETELLVERII-YEGKRLFPQGSPLLGD 126 Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF-SSVE 162 +GTG+GA+ + L P ++ D+S ALE+A+ NAV NGV +R LQ D VE Sbjct: 127 IGTGSGAIPVTLAHACPEWRVYSSDLSPLALEVARRNAVRNGVGDRVTLLQGDLLLPYVE 186 Query: 163 -GL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220 GL D++VSNPPYI + + L EVR F+P +L GG DGL YR + D + + Sbjct: 187 RGLPIDILVSNPPYIPTGDLPALQPEVRQFEPHTALFGGPDGLDLYRRMMDQLGSLPKQP 246 Query: 221 GLCSVEIGYNQKVDVVRIFESRKLF-LVNAFKDYGGNDR 258 L +E+G Q DV + + V KD G DR Sbjct: 247 ALVGLEVGIGQADDVANLLRGAGDWSSVEYVKDLAGIDR 285 >gi|241895237|ref|ZP_04782533.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Weissella paramesenteroides ATCC 33313] gi|241871543|gb|EER75294.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Weissella paramesenteroides ATCC 33313] Length = 286 Score = 122 bits (307), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 84/239 (35%), Positives = 123/239 (51%), Gaps = 8/239 (3%) Query: 27 DSVLDDRQRFFLTNAIVRSLKH-ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85 ++VL+D +R A VR++K + + LG FY + PR ETE LV+ Sbjct: 53 NTVLEDEKRLRFMVA-VRAIKGGQPVQYALGHAAFYGREFQVDRRVLIPRQETEELVEWV 111 Query: 86 LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145 LA E+ +LD+GTG+GA+ ++L E + VG DIS +AL +AK NA Sbjct: 112 LADHPTNTEQH----VLDMGTGSGAIAVSLSAERTSWAVVGADISEEALAVAKENAQLYA 167 Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSH 205 S + LQSD F+ V G FD+IV+NPPYI + V F+P I+L DGL+ Sbjct: 168 PSVQL--LQSDLFTGVTGSFDIIVANPPYISRNEQSLMDESVVMFEPDIALYADDDGLAL 225 Query: 206 YRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 Y+ +A + L G EIGY Q +V +F + +V +D G+DR++ R Sbjct: 226 YKKMATDLLTFLKPGGAAYFEIGYQQGEKLVDLFSTLPHVIVTLRQDLSGHDRMIKVLR 284 >gi|208779476|ref|ZP_03246821.1| methyltransferase, HemK family [Francisella novicida FTG] gi|208744437|gb|EDZ90736.1| methyltransferase, HemK family [Francisella novicida FTG] Length = 284 Score = 122 bits (307), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 84/257 (32%), Positives = 136/257 (52%), Gaps = 10/257 (3%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 D +C V G+ + ++ D LD + I+R L E + ILG++ F+N + Sbjct: 26 HDLQMIICDVLGVDKAYLYINSDKQLDKNTLKKIDEKILRLLAGEPLAYILGYKYFWNQK 85 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALLKESPFFK 123 L ++ DT PR +TE +V A L I+ +D ++ILDLGTGTGA+ LA+ E + Sbjct: 86 LYVTKDTLIPRADTETVV----ATVLDDIQNKDAQLKILDLGTGTGAIALAIAAELANSQ 141 Query: 124 GVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181 V VD+ ++L++AK NA N ++ +F +QS W+++++ FD+IVSNPPYI+ + Sbjct: 142 VVAVDLYQQSLDVAKKNAQANNITNVKF--IQSSWYTNLDTDKFDIIVSNPPYIDLADTN 199 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 + V+D++P +L +GL+ R I LN G +E G+ Q + +F Sbjct: 200 -IDQSVKDYEPARALFAADNGLADIRIIISQAKDFLNLGGFVYIEHGFTQADAIKALFSQ 258 Query: 242 RKLFLVNAFKDYGGNDR 258 + KD NDR Sbjct: 259 YNFTHIKTVKDLNNNDR 275 >gi|238913675|ref|ZP_04657512.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] Length = 277 Score = 122 bits (307), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 94/256 (36%), Positives = 133/256 (51%), Gaps = 8/256 (3%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 RD+ L VTG ++ ++ L D Q+ L + + R + E I + G R+F+++ Sbjct: 22 RDAEILLEYVTGKGRTYIMAFGETPLTDVQQQQLADLLQRRKQGEPIAYLTGLREFWSLP 81 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L +S T PRP+TE LV+ ALA LP RILDLGTGTGA+ LAL E P + Sbjct: 82 LFVSPATLIPRPDTECLVEQALA-RLP----VKTCRILDLGTGTGAIALALACERPDCEV 136 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183 VD A+ +A NA + LQS WFS++ G FD+IVSNPPYI++ Sbjct: 137 TAVDRMPDAVALAIRNAEHLAI-RNVRILQSCWFSALSGQQFDMIVSNPPYIDAQDPHLS 195 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 +VR F+PR +L +G++ I D + L G +E G+ Q V +F Sbjct: 196 EGDVR-FEPRSALVADENGMADLTHIIDNARQMLTPGGFLLLEHGWRQGEAVRAVFRRSG 254 Query: 244 LFLVNAFKDYGGNDRV 259 V +DYGGN+RV Sbjct: 255 YSDVETCRDYGGNERV 270 >gi|307265647|ref|ZP_07547200.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Thermoanaerobacter wiegelii Rt8.B1] gi|326389250|ref|ZP_08210818.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Thermoanaerobacter ethanolicus JW 200] gi|306919291|gb|EFN49512.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Thermoanaerobacter wiegelii Rt8.B1] gi|325994613|gb|EGD53037.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Thermoanaerobacter ethanolicus JW 200] Length = 279 Score = 122 bits (307), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 78/216 (36%), Positives = 116/216 (53%), Gaps = 9/216 (4%) Query: 48 HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTG 107 H I+ + F + + + PRPETE+LV+ L R+E+ +V ILD+GTG Sbjct: 66 HIPYQYIVKKQHFMGLEFFVDENVLIPRPETEILVEEVLK----RVERGNV--ILDIGTG 119 Query: 108 TGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LF 165 +GA+ +++ K VDIS KA+E+AK NA GV +R ++SD F ++ F Sbjct: 120 SGAIAVSISKYFADCTVYAVDISKKAIEVAKYNAEKQGVLDRIFFIESDLFRNLPPNLKF 179 Query: 166 DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225 D IVSNPPYI+ ++ L EV+ +P ++LDGG DGL Y+ I ++ G Sbjct: 180 DFIVSNPPYIKRNEIELLQEEVKK-EPIVALDGGEDGLFFYKKIIKEAPFYMKSGGKIGF 238 Query: 226 EIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 EIGY QK ++ E + KD G DRV++ Sbjct: 239 EIGYGQKEEITNFLEKDGFKDIEIIKDLAGIDRVII 274 >gi|269798158|ref|YP_003312058.1| modification methylase, HemK family [Veillonella parvula DSM 2008] gi|269094787|gb|ACZ24778.1| modification methylase, HemK family [Veillonella parvula DSM 2008] Length = 289 Score = 122 bits (307), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 77/218 (35%), Positives = 123/218 (56%), Gaps = 9/218 (4%) Query: 47 KHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGT 106 K + I+G +DF + ++ PRP+TE L++ L + P K +RILD+ T Sbjct: 71 KGHCVAAIIGEKDFMGLTFKVNDKVLIPRPDTETLIEHVLG-TYP---KDSNLRILDVCT 126 Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--- 163 G G + L+LL P GVG+DIS AL +A+ N + +S+R ++SD F ++ G Sbjct: 127 GPGTILLSLLHYLPNSSGVGLDISTDALPVARENGESFNLSDRVQFMESDMFHTLYGKKE 186 Query: 164 LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223 FD+IVSNPPYI + + L +V + +P I+L GG DGL YR +A +LN +G Sbjct: 187 KFDLIVSNPPYIRTGDLKMLSPDVLN-EPHIALFGGEDGLQFYRILAKECRNYLNANGRV 245 Query: 224 SVEIGYNQKVDVVRIF-ESRKLFLVNAFKDYGGNDRVL 260 + E+G++Q +V + E+ + ++ D GG +RV+ Sbjct: 246 AFEVGFDQAEEVGALLQETGQYSNIHFIADLGGYNRVV 283 >gi|330941683|gb|EGH44458.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Pseudomonas syringae pv. pisi str. 1704B] Length = 277 Score = 122 bits (307), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 78/240 (32%), Positives = 121/240 (50%), Gaps = 7/240 (2%) Query: 26 PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85 P+ ++ + R K E + ILG + F+ + L ++ T PRPETE LV++A Sbjct: 42 PERIVSTEAAVAFAGYMERRRKGEPVAYILGQQGFWKLDLEVAPHTLIPRPETEKLVEAA 101 Query: 86 LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145 L + ++LDLGTGTGA+ LAL E +K VD +A+ +A+ N Sbjct: 102 LEL----VPAFAPAQVLDLGTGTGAIALALANERQQWKVTAVDRVPEAVALAERNRQRLQ 157 Query: 146 VSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204 ++ + +S W S ++G FD+I+SNPPYI +VR F+P +L G DGL Sbjct: 158 LNN-AEVFESHWLSGLQGRQFDLIISNPPYISDADPHLSAGDVR-FEPSSALVAGSDGLD 215 Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 RTI + HLN DG +E GY+Q V + + + +D G ++R+ C+ Sbjct: 216 DLRTIIEQAPAHLNVDGWLLLEHGYDQGPAVRELLIRQGFERIQTRRDLGEHERITFGCK 275 >gi|294792025|ref|ZP_06757173.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Veillonella sp. 6_1_27] gi|294457255|gb|EFG25617.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Veillonella sp. 6_1_27] Length = 289 Score = 122 bits (307), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 79/218 (36%), Positives = 123/218 (56%), Gaps = 9/218 (4%) Query: 47 KHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGT 106 K + I+G +DF + ++ PRP+TE L++ L + P K VRILD+ T Sbjct: 71 KGHCVAAIIGEKDFMGLTFKVNDKVLIPRPDTETLIEHVLG-TYP---KDSNVRILDVCT 126 Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--- 163 G G + L+LL P GVG++IS AL +A+ N +++R L+SD FS++ G Sbjct: 127 GPGTILLSLLHYLPNACGVGLEISIDALLVAEENGERFNLNDRVQFLESDMFSALAGNAE 186 Query: 164 LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223 FD+IVSNPPYI + V L +V + +P I+L GG DGL YR +A +LN +G Sbjct: 187 KFDLIVSNPPYIRTGDVKLLSQDVLN-EPHIALFGGEDGLEFYRILAKECRNYLNANGRV 245 Query: 224 SVEIGYNQKVDVVRIF-ESRKLFLVNAFKDYGGNDRVL 260 + E+G++Q +V + E+ + + D GG++RV+ Sbjct: 246 AFEVGFDQAKEVGALLQETGQYSNIQFIADLGGHNRVV 283 >gi|301299953|ref|ZP_07206180.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Lactobacillus salivarius ACS-116-V-Col5a] gi|300852435|gb|EFK80092.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Lactobacillus salivarius ACS-116-V-Col5a] Length = 279 Score = 122 bits (307), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 86/259 (33%), Positives = 130/259 (50%), Gaps = 7/259 (2%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 L D +C G Q++++ + +DD+ L I + + ++G++DFY Sbjct: 23 TLEDVDYLICGQMGWDKTQLLMNYRTRIDDKNYQELQEKIELYNQDYPLQYLIGYQDFYG 82 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 +RL ++ DT PRPETE LVD L + K + +LD+GTGTGA+ LAL + Sbjct: 83 LRLKVTKDTLIPRPETEELVDWILNDN----SKNENYDVLDVGTGTGAIGLALKSIRSNW 138 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182 DIS AL++AK NA + F T SD F +EG D+IVSNPPYI Sbjct: 139 NIFLSDISEPALKVAKENAQNLNLDVSFST--SDLFEKIEGKKDIIVSNPPYISENEKIY 196 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 + V +++P +L +GL Y IA+ + L + +EIG+ Q V +IF+ Sbjct: 197 MDKSVLNYEPHQALFAKNNGLEIYERIANESGKLLKQGSKIYMEIGFLQGEAVKKIFKDN 256 Query: 243 -KLFLVNAFKDYGGNDRVL 260 + KD GNDR++ Sbjct: 257 FPNSEITLKKDINGNDRMI 275 >gi|260779384|ref|ZP_05888276.1| Polypeptide chain release factor methylase [Vibrio coralliilyticus ATCC BAA-450] gi|260605548|gb|EEX31843.1| Polypeptide chain release factor methylase [Vibrio coralliilyticus ATCC BAA-450] Length = 289 Score = 122 bits (307), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 88/259 (33%), Positives = 130/259 (50%), Gaps = 11/259 (4%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ LC ++ PD +LD + R + E + I G R+F+++ L Sbjct: 29 DAAVLLCHTLNKPRSFLLTWPDKILDSEAILAFEANLQRRINGEPVAYITGEREFWSLPL 88 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 ++ T PRP+TE LV+ AL ++ + ILDLGTGTGA+ LA+ E P + Sbjct: 89 KVAPSTLIPRPDTERLVEIALEKAV-----ENQGDILDLGTGTGAIALAIASELPNRQVW 143 Query: 126 GVDISCKALEIAKSNAVTNGV-SERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVDC 182 GVD+ +A ++A+SNA G+ + +F L WF V F +IVSNPPYIE Sbjct: 144 GVDLKQEAKQLAESNAEHLGIRNTQF--LSGSWFEPVGTGTKFALIVSNPPYIEEHDPHL 201 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 +VR F+P +L +GL+ + I+ L DG E GY+Q + V I S Sbjct: 202 AQGDVR-FEPLSALVAKDNGLADIKHISSQALSFLQCDGWLMFEHGYDQGMAVREILGSL 260 Query: 243 KLFLVNAFKDYGGNDRVLL 261 + +KDYG NDRV + Sbjct: 261 GYQNITTYKDYGENDRVTI 279 >gi|291547176|emb|CBL20284.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Ruminococcus sp. SR1/5] Length = 295 Score = 122 bits (307), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 88/244 (36%), Positives = 124/244 (50%), Gaps = 14/244 (5%) Query: 27 DSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL 86 + V D+ +LT I R H + ++ F ++ + PR +TE LV+ AL Sbjct: 48 EPVSDETAAEYLT-LIDRRAGHIPVQQLTHQAFFMGYEFYVNENVLIPRQDTETLVEEAL 106 Query: 87 AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146 L +EK + ILD+ TG+G + L+LL E G GVD+S +ALE+AK NA V Sbjct: 107 K-HLGNVEKPE---ILDMCTGSGCILLSLLLERQDACGTGVDVSPEALEVAKKNAGILKV 162 Query: 147 SERFDTLQSDWFSSV---------EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197 R D ++SD FS+ G +D+++SNPPYI + ++ L EVR DPR +LD Sbjct: 163 ENRADFVESDLFSAPYFCEKGGKDSGKYDILISNPPYIATEEIETLMEEVRLHDPRKALD 222 Query: 198 GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGND 257 G DGL YR I R+L G EIG Q V + ++ V KD G D Sbjct: 223 GMEDGLYFYRKITAEAGRYLKPGGWLLYEIGCTQGEAVSTMMKAAGFTGVQIVKDLPGLD 282 Query: 258 RVLL 261 RV+L Sbjct: 283 RVVL 286 >gi|17547622|ref|NP_521024.1| methyltransferase [Ralstonia solanacearum GMI1000] gi|17429926|emb|CAD16610.1| probable methylase of polypeptide chain release factors protein [Ralstonia solanacearum GMI1000] Length = 306 Score = 122 bits (307), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 90/260 (34%), Positives = 126/260 (48%), Gaps = 15/260 (5%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 ++ + VTGLS Q+I +DD R L R L E + +LG R+F+ Sbjct: 42 EARMLVSHVTGLSRVQLITQDTCGIDDGTRTRLAELATRRLAGEPMAYLLGEREFFGRMF 101 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG--AVCLALLKESPFFK 123 ++ PRP+TELLV+ AL RI+ RD +LDLGTG+G AV +AL + + Sbjct: 102 QVTPAVLIPRPDTELLVEQALD----RIDDRDAPAVLDLGTGSGIIAVTIALARRD--AR 155 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-----EGLFDVIVSNPPYIESV 178 D S AL +A NA G + L DW++++ +FD+IVSNPPYI S Sbjct: 156 VWATDTSADALAVAVRNAQALGAANMHAAL-GDWYAALPESDAPPVFDLIVSNPPYIAST 214 Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238 ++R F+P +L DGL H RTI G L DG +E GY+Q V + Sbjct: 215 DAHLGQGDLR-FEPAGALTDHGDGLRHLRTIVAGAPARLAADGWLLLEHGYDQGPAVRAL 273 Query: 239 FESRKLFLVNAFKDYGGNDR 258 V +D G+DR Sbjct: 274 LADAGFADVFTAQDLTGHDR 293 >gi|309800292|ref|ZP_07694465.1| HemK protein [Streptococcus infantis SK1302] gi|308116076|gb|EFO53579.1| HemK protein [Streptococcus infantis SK1302] Length = 278 Score = 122 bits (307), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 80/217 (36%), Positives = 119/217 (54%), Gaps = 12/217 (5%) Query: 48 HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTG 107 H I+G +F+ ++L + PRPETE LV+ LA + + +++LD+GTG Sbjct: 65 HIPAQYIIGHAEFFGMQLEVDERVLIPRPETEELVELILAEN-----PEENLKVLDIGTG 119 Query: 108 TGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDV 167 +GA+ LAL K P + DIS AL++A NA G++ F ++S+ FS + +D+ Sbjct: 120 SGAIALALAKNRPDWTITAADISQDALDLAMENADNLGLTLFF--IKSNCFSEISSKYDI 177 Query: 168 IVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227 IVSNPPYI V +GL V +P ++L DGL+ YR IA+ +LN G +EI Sbjct: 178 IVSNPPYISRVDEAEVGLNVLHSEPHLALFADEDGLAIYRRIAEESKDYLNDGGKIYLEI 237 Query: 228 GYNQKVDVVRIFESRKLFL---VNAFKDYGGNDRVLL 261 GY Q V +F +K F V KD G DR+++ Sbjct: 238 GYKQGQSVPALF--KKNFPEKRVRTLKDQFGQDRMVV 272 >gi|294101725|ref|YP_003553583.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Aminobacterium colombiense DSM 12261] gi|293616705|gb|ADE56859.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Aminobacterium colombiense DSM 12261] Length = 286 Score = 122 bits (307), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 76/267 (28%), Positives = 133/267 (49%), Gaps = 11/267 (4%) Query: 2 QALRDSHSFLCRVTGLS-SHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60 +A ++ FLC + +S S +++ + L + + L + R + E + I+G+ F Sbjct: 26 RAESETEWFLCSLKEISRSRFLLIASEVYLTEEEVISLNQMVQRRISGEPLQYIIGYESF 85 Query: 61 YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120 + + PRPETEL+V+ AL + + LD GTG+G + +L E P Sbjct: 86 WGRDFLVGPGCLIPRPETELVVEEALRYFVKG-------SFLDWGTGSGCIAATILAERP 138 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIES 177 +GV +++S +A+E A N + R S S + D+I+SNPPYI + Sbjct: 139 LSRGVAIEVSPQAIEWAWKNLRRYNLLHRCLLWHSREMSDIPVPSQSLDLIISNPPYIPT 198 Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237 + L EV ++P ++LDGG DGL +Y+ + L G+ VE+G + + +V+ Sbjct: 199 AAIGRLMKEVAGYEPYVALDGGEDGLLYYKELLHVAPIWLKPGGMLVVELGDSTQGEVLA 258 Query: 238 IFESRKLFLVNAFKDYGGNDRVLLFCR 264 + + L L+ KD+ G R+ ++CR Sbjct: 259 NYNALGLRLMKLAKDFQGIYRIAVWCR 285 >gi|168260000|ref|ZP_02681973.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|205350947|gb|EDZ37578.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] Length = 277 Score = 122 bits (307), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 94/256 (36%), Positives = 133/256 (51%), Gaps = 8/256 (3%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 RD+ L VTG ++ ++ L D Q+ L + + R + E I + G R+F+++ Sbjct: 22 RDAEILLEYVTGKGRTYIMAFGETPLTDVQQQQLADLLQRRKQGEPIAYLTGLREFWSLP 81 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L +S T PRP+TE LV+ ALA LP RILDLGTGTGA+ LAL E P + Sbjct: 82 LFVSPATLIPRPDTECLVEQALA-RLP----VKTCRILDLGTGTGAIALALACERPDCEV 136 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183 VD A+ +A NA + LQS WFS++ G FD+IVSNPPYI++ Sbjct: 137 TAVDRMPDAVALAIRNAEHLAI-RNVRILQSCWFSALSGQQFDMIVSNPPYIDAQDPHLS 195 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 +VR F+PR +L +G++ I D + L G +E G+ Q V +F Sbjct: 196 EGDVR-FEPRSALVADENGMADLTHIIDNARQMLTPGGFLLLEHGWQQGEAVRAVFRRFG 254 Query: 244 LFLVNAFKDYGGNDRV 259 V +DYGGN+RV Sbjct: 255 YTDVETCRDYGGNERV 270 >gi|331008867|gb|EGH88923.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 277 Score = 122 bits (307), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 79/240 (32%), Positives = 120/240 (50%), Gaps = 7/240 (2%) Query: 26 PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85 P+ ++ + R E + ILG + F+ + L ++ T PRPETE+LV++A Sbjct: 42 PERIVSTEAALAFAGYLQRRCTGEPVAYILGQQGFWKLDLEVAPHTLIPRPETEMLVEAA 101 Query: 86 LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145 L + P ++LDLGTGTGA+ LAL E +K VD +A+ +A+ N Sbjct: 102 LELA-PAFAP---AKVLDLGTGTGAIALALANERQQWKVTAVDRVPEAVALAERNRQRLQ 157 Query: 146 VSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204 + + L WFS++EG FD+I+SNPPYI +VR F+P +L G DGL Sbjct: 158 L-DNAQVLNRHWFSALEGQQFDLIISNPPYIADADPHLSAGDVR-FEPSSALTAGSDGLD 215 Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 RTI HL+ DG +E GY+Q V + + +D G ++R+ C+ Sbjct: 216 DLRTIIADAPVHLSADGWLLLEHGYDQGPAVRELLIRHGFERIQTRRDLGEHERITFGCK 275 >gi|251789677|ref|YP_003004398.1| modification methylase, HemK family [Dickeya zeae Ech1591] gi|247538298|gb|ACT06919.1| modification methylase, HemK family [Dickeya zeae Ech1591] Length = 283 Score = 122 bits (307), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 89/258 (34%), Positives = 131/258 (50%), Gaps = 8/258 (3%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 RD+ L +TG ++ ++ L D + L + + R + E I ++G+R+F+++ Sbjct: 22 RDAEILLEHITGKGRTFLLAFGETELMDSEYQTLESLLARRVTGEPIAYLIGYREFWSLP 81 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L +S T PRP+TE LV+ ALA LP ++DLGTGTGA+ LA+ E P + Sbjct: 82 LAVSPVTLIPRPDTECLVEHALAH-LP----AGASSVVDLGTGTGAIALAIAHERPDCRV 136 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCL 183 VGVD A+ +A NA ++ L DWFS + G F +IVSNPPYI+ Sbjct: 137 VGVDRQHDAVVLASHNARRLEINNA-QFLPGDWFSPLAGQRFSLIVSNPPYIDEHDPHLS 195 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 +VR F+P +L DGL+ R I L DG +E G+ Q V + Sbjct: 196 RGDVR-FEPASALVAAEDGLADLRQIIRQAGTFLLDDGWLLLEHGWQQGQAVRALLSQYG 254 Query: 244 LFLVNAFKDYGGNDRVLL 261 V ++DYG N+RV L Sbjct: 255 FAQVKTYRDYGDNERVTL 272 >gi|87124890|ref|ZP_01080737.1| SAM (and some other nucleotide) binding motif protein [Synechococcus sp. RS9917] gi|86167210|gb|EAQ68470.1| SAM (and some other nucleotide) binding motif protein [Synechococcus sp. RS9917] Length = 299 Score = 122 bits (307), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 82/222 (36%), Positives = 118/222 (53%), Gaps = 12/222 (5%) Query: 46 LKHESIHRILG---WRDFYNVRLTLSSDTFEPRPETELLVDSALA---FSLPRIEKRDVV 99 L+HE + ++G WRD LT+S+ PR ETE LVD AL + P + ++ Sbjct: 73 LQHEPLQHLVGRCPWRDL---ELTVSAAALIPRQETESLVDLALERWRAAQPGASPQPLL 129 Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R DLGTG+GA+ +AL + P G VD S AL +A+ N +GVS R DW+ Sbjct: 130 RWADLGTGSGALAVALARAFPQASGHAVDCSEAALALARLNLERHGVSARCTLHSGDWWQ 189 Query: 160 SVE---GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216 + GL +++SNPPYI S +VD L VR+ +PR++LDGG DGL+ R I G Sbjct: 190 PLRPWWGLLQLVLSNPPYIPSAVVDQLDPVVREHEPRLALDGGADGLAATRLIVAGAPEA 249 Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258 L G +E ++Q V+ + + L + A D+ G R Sbjct: 250 LAPGGWLLIEHHHDQSAAVLDLCAAAGLDHLKAETDWQGVRR 291 >gi|297582071|ref|ZP_06943990.1| hemK protein [Vibrio cholerae RC385] gi|297533766|gb|EFH72608.1| hemK protein [Vibrio cholerae RC385] Length = 286 Score = 122 bits (306), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 90/260 (34%), Positives = 128/260 (49%), Gaps = 13/260 (5%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ LC V ++ PD L+ L + R E + ILG R+F+++ L Sbjct: 27 DAAVLLCHVLAKPRSYLLTWPDKTLEKPTLASLELLLARRRAGEPMAYILGEREFWSLSL 86 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV--RILDLGTGTGAVCLALLKESPFFK 123 +S T PRP+TE LV+ AL +K ++ +LDLGTGTGA+ LAL E P + Sbjct: 87 KVSPSTLIPRPDTERLVELAL-------DKAALIDGELLDLGTGTGAIALALASELPTRQ 139 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIESVIVD 181 G+D+ +A E+A+ NA + LQ WFS + F +IVSNPPYIE Sbjct: 140 VTGIDLRPEAAELARENATRLAIHNAL-FLQGSWFSPLADGTKFALIVSNPPYIEENDPH 198 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P+ +L +GL+ R I+ R L G E GY+Q V V I Sbjct: 199 LSLGDVR-FEPKSALVAEENGLADIRHISTHAPRFLLDGGWLLFEHGYDQGVAVRTILRD 257 Query: 242 RKLFLVNAFKDYGGNDRVLL 261 + +DY G+DRV L Sbjct: 258 LGYQNIITEQDYAGHDRVTL 277 >gi|239817176|ref|YP_002946086.1| modification methylase, HemK family [Variovorax paradoxus S110] gi|239803753|gb|ACS20820.1| modification methylase, HemK family [Variovorax paradoxus S110] Length = 283 Score = 122 bits (306), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 82/256 (32%), Positives = 121/256 (47%), Gaps = 12/256 (4%) Query: 6 DSHSFLCRVTGLSSHQ---VIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 D+ L G + H ++ L D L+ + R L E + +LG ++F+ Sbjct: 27 DAQLLLLHALGRAPHDRAWLLAHDTDTLSDAAWSALSAQLPRRLAGEPVAYLLGEKEFHG 86 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L + + PRP+TE LVD ++L +E RD R+LDLGTG+GA+ LAL P Sbjct: 87 LGLQVDARVLVPRPDTETLVD----WALQCLEGRDAPRVLDLGTGSGAIALALQHARPDA 142 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182 VD S AL +A++NA G+ RF Q+ W G + VI SNPPYI + Sbjct: 143 LVDAVDASADALAVAEANAQRLGLPVRFR--QAHWLDGAAGGYAVIASNPPYIAAGDPHL 200 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 L+ +P +L G DGL+ R I HL G +E G++Q V ++ +R Sbjct: 201 AALQ---HEPLAALVAGPDGLADIRQIVQQAPAHLADGGWLLLEHGHDQAAAVRQLLGAR 257 Query: 243 KLFLVNAFKDYGGNDR 258 V + D G R Sbjct: 258 GFAEVQSRDDLAGIQR 273 >gi|15677887|ref|NP_275055.1| hemK protein [Neisseria meningitidis MC58] gi|7227327|gb|AAF42384.1| hemK protein [Neisseria meningitidis MC58] Length = 423 Score = 122 bits (306), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 86/221 (38%), Positives = 114/221 (51%), Gaps = 12/221 (5%) Query: 44 RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103 R L E + ILG R+FY R T++ PRPETE LV++ LA LP + R+ D Sbjct: 204 RRLNGEPVAYILGVREFYGRRFTVNPSVLIPRPETEHLVEAVLA-RLP-----ENGRVWD 257 Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS--- 160 LGTG+GAV + + E P DIS ALE A+ NA G R + WF + Sbjct: 258 LGTGSGAVAVTVALERPDAFVRASDISPPALETARKNAADLGA--RVEFAHGSWFDTDMP 315 Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220 EG +D+IVSNPPYIE+ L ++R F+P+I+L DGLS RT+A G L + Sbjct: 316 SEGKWDIIVSNPPYIENGDKHLLQGDLR-FEPQIALTDFSDGLSCIRTLAQGAPDRLAEG 374 Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 G +E G++Q V + V D G DRV L Sbjct: 375 GFLLLEHGFDQGAAVRGVLAENGFSGVETLPDLAGLDRVTL 415 >gi|168491916|ref|ZP_02716059.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptococcus pneumoniae CDC0288-04] gi|183573762|gb|EDT94290.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptococcus pneumoniae CDC0288-04] Length = 279 Score = 122 bits (306), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 80/239 (33%), Positives = 121/239 (50%), Gaps = 16/239 (6%) Query: 28 SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALA 87 V + ++ F+ + + H+ I+G DFY + L + PRPETE LV+ L Sbjct: 46 EVTTEEEKQFVEDIYQQLAAHKPAQYIIGQADFYGMHLKVDERVLIPRPETEELVELILT 105 Query: 88 FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147 +L + +LD+GTG+GA+ LAL K P + D+S +ALE+A NA ++ Sbjct: 106 ENL-----ETNLSVLDIGTGSGAIALALAKNRPAWSVTAADVSQEALELASENASDQNLN 160 Query: 148 ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207 F +SD F+ + +D+IVSNPPYI +GL V +P ++L DGL+ Y Sbjct: 161 IFFK--KSDCFAEISEKYDIIVSNPPYISREDESEVGLNVLHSEPHLALFADEDGLAIYC 218 Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF-----ESRKLFLVNAFKDYGGNDRVLL 261 IA+ + +L G +EIGY Q V +F E R V KD G DR+++ Sbjct: 219 RIAEDATDYLKDSGKIYLEIGYKQGQSVPELFRKHLPEKR----VRTLKDQFGQDRMVV 273 >gi|291550092|emb|CBL26354.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Ruminococcus torques L2-14] Length = 312 Score = 122 bits (306), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 78/265 (29%), Positives = 134/265 (50%), Gaps = 10/265 (3%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L VTG++ + +DPD +D + + H + I G ++F + Sbjct: 43 DAWYLLEFVTGITKARYYMDPDQSMDPEAWKKYKEYLEKRRNHIPLQHITGSQEFMGLEF 102 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRI-EKRDVVRILDLGTGTGAVCLALL----KESP 120 ++ PR +TE+LV+ AL I + +++LD+ TG+G + L+++ ++ Sbjct: 103 LVNEHVLIPRQDTEVLVEEALEMMKQEIFRSKGCLQLLDMCTGSGCILLSVMHYAEQKGI 162 Query: 121 FFKGVGVDISCKALEIAKSN-----AVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYI 175 F +G GVD S +AL +A+ N + + + + + SD F +V +D+I+SNPPYI Sbjct: 163 FIEGTGVDFSEQALMVAQKNEKHLRSTKKDENGKVNWILSDLFENVSETYDMILSNPPYI 222 Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235 + ++ L EV+ DP +LDG DGL YR I + L G+ + EIGY+Q +V Sbjct: 223 RTAEIEKLQDEVKLHDPFSALDGKEDGLYFYRKIVTDAKQFLKTGGILAFEIGYDQGKEV 282 Query: 236 VRIFESRKLFLVNAFKDYGGNDRVL 260 + + V KD G DR++ Sbjct: 283 SDLMKKAGYDKVFVKKDLAGLDRIV 307 >gi|212697118|ref|ZP_03305246.1| hypothetical protein ANHYDRO_01684 [Anaerococcus hydrogenalis DSM 7454] gi|212675893|gb|EEB35500.1| hypothetical protein ANHYDRO_01684 [Anaerococcus hydrogenalis DSM 7454] Length = 263 Score = 122 bits (306), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 77/209 (36%), Positives = 120/209 (57%), Gaps = 8/209 (3%) Query: 55 LGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLA 114 +G +FY + L + PR ETE+LVD + + K+D +ILD+G+G+GA+ LA Sbjct: 62 IGKWNFYGLDLLVDKRALIPRYETEILVDLIINDKV----KKD--KILDIGSGSGAISLA 115 Query: 115 LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174 L K +GVDIS A+ ++ N N + + +SD FS+VEG FD+IVSNPPY Sbjct: 116 LSYNLKNSKVLGVDISKDAINLSNENK-KNLSIKNVEFKESDIFSNVEGKFDIIVSNPPY 174 Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234 I + L ++ ++P+ +L GG DGL YR I + LNK+G +EIGY+QK Sbjct: 175 INKEDFENLDKKLS-YEPQNALLGGDDGLFFYRKIILNAKKFLNKNGKIYLEIGYDQKNP 233 Query: 235 VVRIFESRKLFLVNAFKDYGGNDRVLLFC 263 ++++ + + A+KD+ DR++ C Sbjct: 234 IIKLLKEEGYKDIRAYKDFNDFDRIIKAC 262 >gi|307706537|ref|ZP_07643344.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptococcus mitis SK321] gi|307617992|gb|EFN97152.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptococcus mitis SK321] Length = 278 Score = 122 bits (306), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 87/262 (33%), Positives = 130/262 (49%), Gaps = 17/262 (6%) Query: 6 DSHSFLCR-VTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 +S SF+ R + LS + ++ ++ F+ + H+ I+G DFY ++ Sbjct: 22 ESLSFVYRSLKNLSFTDFVFALQQEVNKEEKQFVKGIFQQLAAHKPAQYIIGQTDFYGMQ 81 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 LT+ PRPETE LV LA + P + +LD+GTG+GA+ LAL K P + Sbjct: 82 LTVDERVLIPRPETEELVGLILAEN-PETN----LSVLDIGTGSGAIALALAKNRPDWSV 136 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184 DIS AL++A NA + + +SD F+ + +D+IVSNPPYI +G Sbjct: 137 TAADISQDALDLANENAKNQNL--QIFLKKSDCFTEISEKYDIIVSNPPYISREDESEVG 194 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF----- 239 L V +P ++L DGL+ YR IA+ +L G +EIGY Q V +F Sbjct: 195 LNVLHSEPHLALFADEDGLAIYRRIAEDAKDYLKDGGKIYLEIGYKQGQSVPELFRKHLP 254 Query: 240 ESRKLFLVNAFKDYGGNDRVLL 261 E R V KD G DR+++ Sbjct: 255 EKR----VRTLKDQFGQDRMVV 272 >gi|121635723|ref|YP_975968.1| hemk protein [Neisseria meningitidis FAM18] gi|120867429|emb|CAM11201.1| hemk protein [Neisseria meningitidis FAM18] Length = 423 Score = 122 bits (306), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 83/221 (37%), Positives = 114/221 (51%), Gaps = 12/221 (5%) Query: 44 RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103 R L E + +LGWR+FY R ++ + PRPETE LV++ LA LP + R+ D Sbjct: 204 RRLNGEPVAYLLGWREFYGRRFAVNPNVLIPRPETEHLVEAVLA-RLP-----ENGRVWD 257 Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS--- 160 LGTG+GAV + + E P DIS +LE A+ NA G R + WF + Sbjct: 258 LGTGSGAVAVTVALERPDAFVRASDISPPSLETARKNAADLGA--RVEFAHGSWFDTDMP 315 Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220 EG +D+IVSNPPYIE+ ++R F+P+I+L DGLS RT+A G L + Sbjct: 316 SEGKWDIIVSNPPYIENGDKHLSQGDLR-FEPQIALTDFSDGLSCIRTLAQGAPDRLAEG 374 Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 G +E G++Q V + V D G DRV L Sbjct: 375 GFLLLEHGFDQGAAVRGVLAENGFSGVETLPDLAGLDRVTL 415 >gi|84394466|ref|ZP_00993180.1| HemK protein [Vibrio splendidus 12B01] gi|84374907|gb|EAP91840.1| HemK protein [Vibrio splendidus 12B01] Length = 290 Score = 122 bits (306), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 90/272 (33%), Positives = 127/272 (46%), Gaps = 25/272 (9%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ LC ++ P+ L Q + R L E + I+G R+F+++ L Sbjct: 29 DAAVLLCHALDKPRSYLLTWPEKHLTSEQESEFHTLLKRRLTGEPVAYIVGEREFWSLPL 88 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 +S T PRP+TE LV+ AL + + ILDLGTGTGA+ LAL E P Sbjct: 89 KVSPSTLIPRPDTERLVEVALDKTYGKQGA-----ILDLGTGTGAIALALASEMPNRPVT 143 Query: 126 GVDISCKALEIAKSNA----VTNGVSERFDTLQSDWFSSVEGL--------FDVIVSNPP 173 G+D+ +A ++A NA +TN L WF + F +IVSNPP Sbjct: 144 GIDLRPEAQQLATENAQRLNITNAT-----FLHGSWFEPLNSASSEEEAVKFSLIVSNPP 198 Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233 YIE +VR F+P +L GL+ R I++ L +G + E GY+Q + Sbjct: 199 YIEKNDPHLSQGDVR-FEPITALVAEEKGLADIRYISENARDFLENEGWLAFEHGYDQGL 257 Query: 234 DVVRIFESRKLFLVNAFKDYGGNDRVLL--FC 263 V I + V KDYGGNDRV L +C Sbjct: 258 AVREIMQQLGYLDVVTEKDYGGNDRVTLGRYC 289 >gi|332678839|gb|AEE87968.1| modification methylase, HemK family [Francisella cf. novicida Fx1] Length = 255 Score = 122 bits (306), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 84/251 (33%), Positives = 135/251 (53%), Gaps = 10/251 (3%) Query: 11 LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70 +C V G+ + ++ D LD + I+R L E + ILG++ F+N +L ++ D Sbjct: 3 ICDVLGVDKTYLYINSDKQLDKNTLKKIDEKILRLLAGEPLAYILGYKYFWNQKLYVTKD 62 Query: 71 TFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALLKESPFFKGVGVDI 129 T PR +TE +V A L I+ +D ++ILDLGTGTGA+ LAL E + V VD+ Sbjct: 63 TLIPRADTETVV----ATVLDDIQNKDAQLKILDLGTGTGAIALALAAELANSQVVAVDL 118 Query: 130 SCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEV 187 ++L++AK NA N ++ +F +QS W+++++ FD+IVSNPPYI+ + + V Sbjct: 119 YQQSLDVAKKNAQANNITNVKF--IQSSWYTNLDTDKFDIIVSNPPYIDLADTN-IDQSV 175 Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLV 247 +D++P +L +GL+ + I LN G +E G+ Q V +F + Sbjct: 176 KDYEPARALFAADNGLADIKIIISQAKDFLNPRGFIYIEHGFTQADAVTALFSQYNFTHI 235 Query: 248 NAFKDYGGNDR 258 KD NDR Sbjct: 236 KTVKDLNNNDR 246 >gi|260554586|ref|ZP_05826807.1| protein-(glutamine-N5) methyltransferase, release factor-specific protein [Acinetobacter baumannii ATCC 19606] gi|260411128|gb|EEX04425.1| protein-(glutamine-N5) methyltransferase, release factor-specific protein [Acinetobacter baumannii ATCC 19606] Length = 273 Score = 122 bits (306), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 76/215 (35%), Positives = 114/215 (53%), Gaps = 12/215 (5%) Query: 49 ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108 E + + G + F+ + L ++SDT PRP+TE+LV++ L +LP+ I+DLGTGT Sbjct: 63 EPLAYVTGSQPFWTLDLKVTSDTLVPRPDTEVLVETVLNLNLPK-----NANIVDLGTGT 117 Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVE-GLFD 166 GA+ LAL E P + DI L++AK NA T+G+ +F WF ++E FD Sbjct: 118 GAIALALASERPDWFVTATDIYAPTLDVAKENAQTHGLHHVKFAC--GAWFEALEPQQFD 175 Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE 226 +IVSNPPYI+ + ++ +PR +L GL+ I L G ++E Sbjct: 176 LIVSNPPYIDP---EDEHMQALATEPRRALVADHHGLADIEIIIAQGKNWLKPQGWIALE 232 Query: 227 IGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 GY+Q V +F + + +DYG NDRV L Sbjct: 233 HGYDQGQAVRNVFAAHGFSEIKTIQDYGQNDRVTL 267 >gi|284921024|emb|CBG34089.1| protein methyltransferase hemk (protein-glutamine N methyltransferase) [Escherichia coli 042] Length = 277 Score = 122 bits (306), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 93/258 (36%), Positives = 128/258 (49%), Gaps = 8/258 (3%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 RD+ L VTG ++ ++ L D Q L + R E I + G R+F+++ Sbjct: 22 RDAEILLEHVTGKGRTFILAFGETQLTDEQCQQLDALLTRRRDGEPIAHLTGGREFWSLP 81 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L +S T PRP+TE LV+ ALA LP RILDLGTGTGA+ LAL E P + Sbjct: 82 LFVSPATLIPRPDTECLVEQALA-RLP----EQPCRILDLGTGTGAIALALASERPDCEI 136 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183 VD A+ +A+ NA N + LQSDWFS++ G F +IVSNPPYI+ Sbjct: 137 TAVDRMPDAVSLAQRNA-QNLAIKNIHILQSDWFSALAGQQFAMIVSNPPYIDEQDPHLQ 195 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 +VR F+P +L G++ I + L G +E G+ Q V + F Sbjct: 196 QGDVR-FEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFIHAG 254 Query: 244 LFLVNAFKDYGGNDRVLL 261 V +DYG N+RV L Sbjct: 255 YHDVETCRDYGDNERVTL 272 >gi|168241357|ref|ZP_02666289.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|194447419|ref|YP_002045818.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194405723|gb|ACF65942.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|205339433|gb|EDZ26197.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] Length = 277 Score = 122 bits (306), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 94/256 (36%), Positives = 133/256 (51%), Gaps = 8/256 (3%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 RD+ L VTG ++ ++ L D Q+ L + + R + E I + G R+F+++ Sbjct: 22 RDAEILLEYVTGKGRTYIMAFGETPLTDVQQQQLADLLQRRKQGEPIAYLTGLREFWSLP 81 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L +S T PRP+TE LV+ ALA LP RILDLGTGTGA+ LAL E P + Sbjct: 82 LFVSPATLIPRPDTECLVEQALA-RLP----VKTCRILDLGTGTGAIALALACERPDCEV 136 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183 VD A+ +A NA + LQS WFS++ G FD+IVSNPPYI++ Sbjct: 137 TAVDRMPDAVALAIRNAEHLAI-RNVRILQSCWFSALSGQQFDMIVSNPPYIDAQDPHLS 195 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 +VR F+PR +L +G++ I D + L G +E G+ Q V +F Sbjct: 196 EGDVR-FEPRSALVADENGMADLTHIIDNARQMLTPGGFLLLEHGWRQGEAVRAVFRRFG 254 Query: 244 LFLVNAFKDYGGNDRV 259 V +DYGGN+RV Sbjct: 255 YTDVETCRDYGGNERV 270 >gi|148984975|ref|ZP_01818218.1| HemK protein [Streptococcus pneumoniae SP3-BS71] gi|147922673|gb|EDK73790.1| HemK protein [Streptococcus pneumoniae SP3-BS71] gi|301799987|emb|CBW32577.1| putative methyltransferase [Streptococcus pneumoniae OXC141] Length = 279 Score = 122 bits (306), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 80/237 (33%), Positives = 120/237 (50%), Gaps = 12/237 (5%) Query: 28 SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALA 87 V + ++ F+ + + H+ I+G DFY + L + PRPETE LV+ L Sbjct: 46 EVTTEEEKQFVEDIYQQLAAHKPAQYIIGQADFYGMHLKVDERVLIPRPETEELVELILT 105 Query: 88 FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147 +L + +LD+GTG+GA+ LAL K P + D+S +AL++A NA + Sbjct: 106 ENL-----ETNLSVLDIGTGSGAIALALAKNRPDWSVTAADVSQEALDLANENAKNQNLQ 160 Query: 148 ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207 F +SD F+ + +D+IVSNPPYI +GL V +P ++L DGL+ YR Sbjct: 161 IFFK--KSDCFTEISEKYDIIVSNPPYISREDESEVGLNVLYSEPHLALFADEDGLAIYR 218 Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF---LVNAFKDYGGNDRVLL 261 IA+ +L G +EIGY Q V +F RK V KD G DR+++ Sbjct: 219 RIAEDAKDYLKDGGKIYLEIGYKQGQSVPELF--RKHLPEKKVRTLKDQFGQDRMVV 273 >gi|204927633|ref|ZP_03218834.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|204322975|gb|EDZ08171.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] Length = 277 Score = 122 bits (306), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 94/256 (36%), Positives = 131/256 (51%), Gaps = 8/256 (3%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 RD+ L VTG ++ ++ L D Q+ L + R + E I + G R+F+++ Sbjct: 22 RDAEILLEYVTGKGRTYIMAFGETPLTDVQQQQLAELLQRRRQGEPIAYLTGLREFWSLP 81 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L +S T PRP+TE LV+ ALA LP RILDLGTGTGA+ LAL E P + Sbjct: 82 LFVSPATLIPRPDTECLVEQALA-RLP----VKTCRILDLGTGTGAIALALACERPDCEV 136 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183 VD A+ +A NA + LQS WFS++ G FD+IVSNPPYI++ Sbjct: 137 TAVDRMPDAVALAIRNAEHLAI-RNVRILQSCWFSALSGQQFDMIVSNPPYIDAQDPHLS 195 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 +VR F+PR +L +G++ I D + L G +E G+ Q V F Sbjct: 196 EGDVR-FEPRSALVADENGMADLTHIIDNARQMLTPGGFLLLEHGWQQGEAVRAFFRRSG 254 Query: 244 LFLVNAFKDYGGNDRV 259 V +DYGGN+RV Sbjct: 255 YSDVETCRDYGGNERV 270 >gi|187931104|ref|YP_001891088.1| modification methylase, HemK family [Francisella tularensis subsp. mediasiatica FSC147] gi|187712013|gb|ACD30310.1| modification methylase, HemK family [Francisella tularensis subsp. mediasiatica FSC147] Length = 284 Score = 122 bits (306), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 85/257 (33%), Positives = 136/257 (52%), Gaps = 10/257 (3%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 D +C V G+ + ++ D LD + I+R L E + ILG++ F+N + Sbjct: 26 HDLQMIICDVLGVDKTYLYINSDKQLDKNTLKKIDEKILRLLAGEPLAYILGYKYFWNQK 85 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALLKESPFFK 123 L ++ DT PR +TE +V A L I+ +D ++ILDLGTGTGA+ LAL E + Sbjct: 86 LYVTKDTLIPRADTETIV----ATVLDDIQNKDAQLKILDLGTGTGAIALALAAELANSQ 141 Query: 124 GVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181 V VD+ ++L++AK NA N ++ +F +QS W+++++ FD+IVSNPPYI+ + Sbjct: 142 VVAVDLYQQSLDVAKKNAQANNITNVKF--IQSSWYTNLDTDKFDIIVSNPPYIDLADTN 199 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 + V+D++P +L +GL+ R I LN G +E G+ Q + +F Sbjct: 200 -IDQSVKDYEPARALFAADNGLADIRIIISQAKDFLNLGGFIYIEHGFTQADAITALFSQ 258 Query: 242 RKLFLVNAFKDYGGNDR 258 + KD NDR Sbjct: 259 CNFTDIKIVKDLNNNDR 275 >gi|170731834|ref|YP_001763781.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Burkholderia cenocepacia MC0-3] gi|169815076|gb|ACA89659.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Burkholderia cenocepacia MC0-3] Length = 280 Score = 122 bits (306), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 87/262 (33%), Positives = 130/262 (49%), Gaps = 15/262 (5%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDR--QRFFLTNAIVRSLKHESIHRILGWRDFYNV 63 D+ L G + Q+I D+ LD +R+ A R + E + +++G R+F+ Sbjct: 19 DARVLLAHALGWTRTQLITRGDAPLDAAAIERYRALEA--RRVAGEPVAQLVGTREFFGR 76 Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 ++ D PRPETELLV++AL I+ +LDLGTG+GA+ +++ E P + Sbjct: 77 PFDVTPDVLIPRPETELLVEAALDA----IDGLPHAAVLDLGTGSGAIAVSIAAERPDAR 132 Query: 124 GVGVDISCKALEIAKSNAVTNGVSER----FDTLQSDWFSSVEGL--FDVIVSNPPYIES 177 +D S AL +A+ NA + R LQSDW+++++ FD IVSNPPYI Sbjct: 133 VWALDRSPAALAVAQRNADKLLDARRPGGPLHWLQSDWYAALDPALGFDAIVSNPPYIAQ 192 Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237 ++R F+PR +L DGLS RTI G S +L G +E GY+Q V Sbjct: 193 HDPHLAQGDLR-FEPRGALTDDADGLSAIRTIVAGASAYLKPGGTLWIEHGYDQAEAVRA 251 Query: 238 IFESRKLFLVNAFKDYGGNDRV 259 I S V + D +R Sbjct: 252 ILASHGFVAVESLADLAAIERT 273 >gi|159896800|ref|YP_001543047.1| HemK family modification methylase [Herpetosiphon aurantiacus ATCC 23779] gi|159889839|gb|ABX02919.1| modification methylase, HemK family [Herpetosiphon aurantiacus ATCC 23779] Length = 283 Score = 122 bits (306), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 83/262 (31%), Positives = 136/262 (51%), Gaps = 17/262 (6%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L V GL+ Q++ + L Q I R E I ++G R+FY + Sbjct: 27 DARVLLGHVLGLTQTQILAAFNDQLSTEQVEQFQGLIERRSALEPIAYLIGSREFYGLMF 86 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 + PRP+TE+LV+ AL + + ++R +V + D+GTG+G + +A+ K +P K Sbjct: 87 NVDRRVLVPRPDTEILVEQALTWI--KQQQRPLV-VADIGTGSGCIAVAVTKHAPTIKMY 143 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185 VD+S AL +A+SN +G+ ++ + + D S + D+++SNPPY ++D + Sbjct: 144 AVDLSPAALAVAQSNVERHGLQQQIELIHGDGVSQLPEPIDLLLSNPPY---TLLDEIEP 200 Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV---EIGYNQKVDVVRI---- 238 VR +P ++LDGG DGL YR + + L + GL S EIG Q +V+ + Sbjct: 201 GVRLHEPTLALDGGPDGLDCYRQLLPATAAIL-RQGLPSAALFEIGAWQGSEVIALAQAS 259 Query: 239 FESRKLFLVNAFKDYGGNDRVL 260 F K+ LV +D DRV+ Sbjct: 260 FPQAKIQLV---RDLAARDRVV 278 >gi|26987470|ref|NP_742895.1| methyl transferase [Pseudomonas putida KT2440] gi|24982134|gb|AAN66359.1|AE016264_3 methyl transferase [Pseudomonas putida KT2440] Length = 276 Score = 122 bits (306), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 78/214 (36%), Positives = 113/214 (52%), Gaps = 8/214 (3%) Query: 49 ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108 E + ILG + F+ + L ++ T PRP+TELLV++AL ++ ++LDLGTGT Sbjct: 65 EPVAYILGLQGFWKIDLEVAPHTLIPRPDTELLVETAL-----ELQPASPAKVLDLGTGT 119 Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDV 167 GA+ LAL E P ++ VD +A +A+ N G++ L S WF S+ FD+ Sbjct: 120 GAIALALASERPAWQVTAVDRVEEAAALAERNRQRLGLANARVRL-SHWFDSLAAERFDL 178 Query: 168 IVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227 IVSNPPYI + + +VR F+P +L G DGL R IA HL G +E Sbjct: 179 IVSNPPYIAAEDPHLVAGDVR-FEPSSALVAGADGLDDLRVIAAQAPAHLLPGGWLLLEH 237 Query: 228 GYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 GY+Q V + V + D GG++R+ L Sbjct: 238 GYDQAAAVRALLAEHGFIEVASRTDLGGHERITL 271 >gi|332200608|gb|EGJ14680.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptococcus pneumoniae GA41317] Length = 279 Score = 122 bits (306), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 80/237 (33%), Positives = 120/237 (50%), Gaps = 12/237 (5%) Query: 28 SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALA 87 V + ++ F+ + + H+ I+G DFY + L + PRPETE LV+ L Sbjct: 46 EVTTEEEKQFVEDIYQQLAAHKPAQYIIGQADFYGMHLKVDERVLIPRPETEELVELILT 105 Query: 88 FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147 +L + +LD+GTG+GA+ LAL K P + D+S +AL++A NA + Sbjct: 106 ENL-----ETNLSVLDIGTGSGAIALALAKNRPDWSVTAADVSQEALDLASENAKNQNLQ 160 Query: 148 ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207 F +SD F+ + +D+IVSNPPYI +GL V +P ++L DGL+ YR Sbjct: 161 IFFK--KSDCFTEISEKYDIIVSNPPYISREDESEVGLNVLYSEPHLALFADEDGLAIYR 218 Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF---LVNAFKDYGGNDRVLL 261 IA+ +L G +EIGY Q V +F RK V KD G DR+++ Sbjct: 219 RIAEDAKDYLKDGGKIYLEIGYKQGQSVPELF--RKHLPEKKVRTLKDQFGQDRMVV 273 >gi|297568590|ref|YP_003689934.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Desulfurivibrio alkaliphilus AHT2] gi|296924505|gb|ADH85315.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Desulfurivibrio alkaliphilus AHT2] Length = 299 Score = 122 bits (305), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 91/254 (35%), Positives = 134/254 (52%), Gaps = 14/254 (5%) Query: 17 LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRP 76 L++ Q + +P RQR L A+ R E + I+G +F+++ + PRP Sbjct: 50 LAAEQPLAEPL-----RQR--LQAALKRRESREPLAYIMGEWEFWSLPFAVGPAVLIPRP 102 Query: 77 ETELLVDSALAF--SLPRIE-KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133 ETELLV+ ALAF L R R RILDLGTG+G + + L +E + V +D S A Sbjct: 103 ETELLVEQALAFVRQLQRPPGGRYPWRILDLGTGSGILAVVLAREIASAQVVALDRSPAA 162 Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCLGLEVRDFD 191 L +A++NA +GV+E+ + SDW S++ FD++V+NPPY+ + L EVR+ + Sbjct: 163 LAMARANARRHGVAEKITFVGSDWLSALAARPAFDLVVANPPYVCRSAMLTLQPEVREHE 222 Query: 192 PRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF-LVNAF 250 P +LDGG GL + I + L DGL +EIG++QK +F + Sbjct: 223 PHTALDGGRQGLDDIKIICRDLPAVLRPDGLLLLEIGWDQKTAAAELFNRNPAYRQTEII 282 Query: 251 KDYGGNDRVLLFCR 264 D G RV L CR Sbjct: 283 NDLAGLPRV-LRCR 295 >gi|264676910|ref|YP_003276816.1| modification methylase, HemK family [Comamonas testosteroni CNB-2] gi|262207422|gb|ACY31520.1| modification methylase, HemK family [Comamonas testosteroni CNB-2] Length = 291 Score = 122 bits (305), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 76/213 (35%), Positives = 108/213 (50%), Gaps = 11/213 (5%) Query: 54 ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113 + G ++FY + L + S +PRP+TE LVD AL + +R VR++DLGTG+GA+ L Sbjct: 84 LTGNKEFYGLDLAVDSRVLDPRPDTETLVDWALEL----MPERQPVRVIDLGTGSGAIAL 139 Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL--FDVIVSN 171 AL + P + + VD S AL +A+SNA + +F W ++GL D+IVSN Sbjct: 140 ALQSQRPSARVIAVDASADALAVARSNAARLQLPVQF--AHGSWLEPLDGLEPVDLIVSN 197 Query: 172 PPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231 PPYI + D L +P +L G DGL R+I D L G E G++Q Sbjct: 198 PPYIRA---DDPHLAALTHEPLSALASGADGLEDIRSIIDQAPARLKDGGWLLFEHGWDQ 254 Query: 232 KVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 DV R+ ++ V D G R CR Sbjct: 255 AEDVARLMQAAGFEQVQHRHDLAGIARCTGGCR 287 >gi|218704734|ref|YP_002412253.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli UMN026] gi|293404755|ref|ZP_06648747.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli FVEC1412] gi|298380398|ref|ZP_06989997.1| HemK protein [Escherichia coli FVEC1302] gi|300896600|ref|ZP_07115119.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS 198-1] gi|218431831|emb|CAR12716.1| N5-glutamine methyltransferase, modifies release factors RF-1 and RF-2 [Escherichia coli UMN026] gi|291426963|gb|EFE99989.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli FVEC1412] gi|298277840|gb|EFI19354.1| HemK protein [Escherichia coli FVEC1302] gi|300359543|gb|EFJ75413.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS 198-1] Length = 277 Score = 122 bits (305), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 93/258 (36%), Positives = 128/258 (49%), Gaps = 8/258 (3%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 RD+ L VTG ++ ++ L D Q L + R E I + G R+F+++ Sbjct: 22 RDAEILLEHVTGKGRTFILAFGETQLTDEQCQQLDALLTRRRDGEPIAHLTGVREFWSLP 81 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L +S T PRP+TE LV+ ALA LP RILDLGTGTGA+ LAL E P + Sbjct: 82 LFVSPATLIPRPDTECLVEQALA-RLP----EQPCRILDLGTGTGAIALALASERPDCEI 136 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183 VD A+ +A+ NA N + LQSDWFS++ G F +IVSNPPYI+ Sbjct: 137 TAVDRMPDAVSLAQRNA-QNLAIKNIHILQSDWFSALAGQQFAMIVSNPPYIDEQDPHLQ 195 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 +VR F+P +L G++ I + L G +E G+ Q V + F Sbjct: 196 QGDVR-FEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFIHAG 254 Query: 244 LFLVNAFKDYGGNDRVLL 261 V +DYG N+RV L Sbjct: 255 YHDVETCRDYGDNERVTL 272 >gi|323964711|gb|EGB60182.1| protein-(glutamine-N5) methyltransferase [Escherichia coli M863] gi|327253902|gb|EGE65531.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli STEC_7v] Length = 277 Score = 122 bits (305), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 92/258 (35%), Positives = 129/258 (50%), Gaps = 8/258 (3%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 RD+ L VTG ++ ++ L D Q L + R E I + G R+F+++ Sbjct: 22 RDAEILLEHVTGKGRTFILAFGETQLTDEQCQQLDALLTRRRDGEPIAHLTGVREFWSLP 81 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L +S T PRP+TE LV+ ALA LP RILDLGTGTGA+ LAL E P + Sbjct: 82 LFVSPATLIPRPDTECLVEQALA-RLP----EQPCRILDLGTGTGAIALALASERPDCEI 136 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183 VD A+ +A+ NA N + LQS+WFS++ G F +IVSNPPYI+ Sbjct: 137 TAVDRMPDAIALAQRNA-QNLAIKNIHILQSNWFSALAGQQFAMIVSNPPYIDEQDPHLQ 195 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 +VR F+P +L G++ I + L G +E G+ Q V ++F Sbjct: 196 QGDVR-FEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQVFIHAG 254 Query: 244 LFLVNAFKDYGGNDRVLL 261 V +DYG N+RV L Sbjct: 255 YHDVETCRDYGDNERVTL 272 >gi|226525304|gb|ACO70903.1| protein-(glutamine-N5) methyltransferase release factor-specific [uncultured Verrucomicrobia bacterium] Length = 280 Score = 122 bits (305), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 78/251 (31%), Positives = 130/251 (51%), Gaps = 9/251 (3%) Query: 10 FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69 L V G ++ ++ D L D++ L + + + + E + +LG +F Sbjct: 30 LLAHVLGKRRMELYLEFDRPLGDQELNPLRDLVKKRAQGEPLQHLLGTAEFCGRTFGCDR 89 Query: 70 DTFEPRPETELLVDSALAFSLPRIEKRDVV--RILDLGTGTGAVCLALLKESPFFKGVGV 127 PRPETE L + +A +KR V RILD+GTG+G + L L P V Sbjct: 90 RALVPRPETEQLCELVVA----EFKKRSVSPRRILDVGTGSGVIALTLAMTWPDAAMEAV 145 Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEV 187 D+S +AL +A+ NA G+++R ++SD F++VEG FD++V+N PYI+ ++ + EV Sbjct: 146 DVSPEALTLARENAARLGLADRIRLVESDLFAAVEGEFDLVVANLPYIDQGVIPTVTREV 205 Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLV 247 + DPR +LDGG G+ + ++HL G+ ++EIG++Q V + + + Sbjct: 206 QR-DPRTALDGGEGGMRVFERFIPAATQHLR--GMLALEIGHDQSDPVRALLAAHNYQDI 262 Query: 248 NAFKDYGGNDR 258 DY G +R Sbjct: 263 RVVSDYQGRNR 273 >gi|254291409|ref|ZP_04962202.1| hemK protein [Vibrio cholerae AM-19226] gi|150422739|gb|EDN14693.1| hemK protein [Vibrio cholerae AM-19226] Length = 286 Score = 122 bits (305), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 89/260 (34%), Positives = 128/260 (49%), Gaps = 13/260 (5%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ LC V ++ PD +L+ L + R E + ILG R+F+++ L Sbjct: 27 DAALLLCHVLAKPRSYLLTWPDKILEKPTLASLELLLARRRAGEPMAYILGEREFWSLSL 86 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV--RILDLGTGTGAVCLALLKESPFFK 123 +S T PRP+TE LV+ AL +K ++ +LDLGTGTGA+ LAL E P + Sbjct: 87 KVSPSTLIPRPDTERLVELAL-------DKAALIDGELLDLGTGTGAIALALASELPTRQ 139 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIESVIVD 181 G+D+ +A E+A+ NA + LQ WFS + F +IVSNPPYIE Sbjct: 140 VTGIDLRPEAAELARENATRLAI-HNAQFLQGSWFSPLADGTKFALIVSNPPYIEENDPH 198 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P+ +L +GL+ R I+ L G E GY+Q V V I Sbjct: 199 LSLGDVR-FEPKSALVAAENGLADIRHISTHAPHFLLDGGWLLFEHGYDQGVAVRTILRD 257 Query: 242 RKLFLVNAFKDYGGNDRVLL 261 + +DY G+DRV L Sbjct: 258 LGYQNIITEQDYAGHDRVTL 277 >gi|113971502|ref|YP_735295.1| HemK family modification methylase [Shewanella sp. MR-4] gi|113886186|gb|ABI40238.1| modification methylase, HemK family [Shewanella sp. MR-4] Length = 286 Score = 122 bits (305), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 82/254 (32%), Positives = 127/254 (50%), Gaps = 8/254 (3%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ FL S + P+ L Q + R + + I+G R+F+++ Sbjct: 28 DAEVFLLYCLNKSRAFLYTWPEKALTVEQWKRFQQMVQRRQQGVPVAHIVGEREFWSLPF 87 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 ++ T PRP+TE+LV++AL L ++LDLGTGTGA+ LAL E ++ Sbjct: 88 IVNDTTLIPRPDTEILVETALNLPL-----ESNAKVLDLGTGTGAIALALASERATWQIT 142 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLG 184 VD A+ +AK+N TN E+ + LQSDWFS+++ FD+IVSNPPYI+ Sbjct: 143 AVDKVEDAVALAKANR-TNLKLEQVEILQSDWFSAIKAHDFDLIVSNPPYIDEADEHLHQ 201 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 +VR F+P+ +L +G + IA +L +G +E G+ Q V + Sbjct: 202 GDVR-FEPQSALTAADEGFADLYYIAKTARDYLKPNGYILLEHGFEQAVKLREKLTELGY 260 Query: 245 FLVNAFKDYGGNDR 258 V +D+G NDR Sbjct: 261 QNVATVRDFGSNDR 274 >gi|42519929|ref|NP_965844.1| HemK family modification methylase [Wolbachia endosymbiont of Drosophila melanogaster] gi|42409666|gb|AAS13778.1| modification methylase, HemK family [Wolbachia endosymbiont of Drosophila melanogaster] Length = 279 Score = 122 bits (305), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 81/260 (31%), Positives = 139/260 (53%), Gaps = 8/260 (3%) Query: 6 DSHSFLCRVTGLSSHQVIVD-PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 D + V G+ +IV+ D V +++ F R+ ++ I +I+G R+F++ Sbjct: 26 DCEIIMQHVLGVERSFIIVNHADQVPMEKELLFWKLTKKRAERY-PISQIIGNREFWSKN 84 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 ++ +PRP++E ++ + L + P K+ ++I D GTGTG + +++L E + G Sbjct: 85 FIVNQHVLDPRPDSETIILAVLKY-YPN--KKQKLKIADFGTGTGCLLISVLSEYEYAVG 141 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184 VG + S +A ++A N + + R S W + G FD+I+SNPPYI+ + L Sbjct: 142 VGFEKSLEAYKVAYQNTKKHDLLSRAKIFPSSW-TECRGSFDLIISNPPYIKRSKLKDLQ 200 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 EV+ +PRI+LDGGIDGLS Y +I + + L K+G +EIG +Q ++ +I S +L Sbjct: 201 AEVQK-EPRIALDGGIDGLSCYLSIFPILRKCLKKNGFAILEIGEDQS-NIDKIIPSYEL 258 Query: 245 FLVNAFKDYGGNDRVLLFCR 264 D G R ++ R Sbjct: 259 AFQEYVYDLAGMKRCIVVKR 278 >gi|316983955|gb|EFV62934.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Neisseria meningitidis H44/76] Length = 410 Score = 122 bits (305), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 86/221 (38%), Positives = 114/221 (51%), Gaps = 12/221 (5%) Query: 44 RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103 R L E + ILG R+FY R T++ PRPETE LV++ LA LP + R+ D Sbjct: 191 RRLNGEPVAYILGVREFYGRRFTVNPSVLIPRPETEHLVEAVLA-RLP-----ENGRVWD 244 Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS--- 160 LGTG+GAV + + E P DIS ALE A+ NA G R + WF + Sbjct: 245 LGTGSGAVAVTVALERPDAFVRASDISPPALETARKNAADLGA--RVEFAHGSWFDTDMP 302 Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220 EG +D+IVSNPPYIE+ L ++R F+P+I+L DGLS RT+A G L + Sbjct: 303 SEGKWDIIVSNPPYIENGDKHLLQGDLR-FEPQIALTDFSDGLSCIRTLAQGAPDRLAEG 361 Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 G +E G++Q V + V D G DRV L Sbjct: 362 GFLLLEHGFDQGAAVRGVLAENGFSGVETLPDLAGLDRVTL 402 >gi|297618445|ref|YP_003703604.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Syntrophothermus lipocalidus DSM 12680] gi|297146282|gb|ADI03039.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Syntrophothermus lipocalidus DSM 12680] Length = 296 Score = 122 bits (305), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 77/261 (29%), Positives = 137/261 (52%), Gaps = 11/261 (4%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 ++ L V G+ + V+ ++ +R I R ++ E + + G ++F+++ Sbjct: 29 EAELLLAYVLGIDRVGLYVNYYQPVNQDERSCYREIIKRRVQGEPVAYLTGKKEFFSLEF 88 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 +S + PR ETE++V+ A+A + + D+GTG GA+ +AL P + V Sbjct: 89 DVSPEVLIPRAETEVMVEKAIAIGR---GMGGSLWVADVGTGCGAIAIALAVYLPNARIV 145 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIVDC 182 +DIS A+E+A+ NA V +R D + D + + D++V+N PY+ + + Sbjct: 146 AIDISSAAVELARKNARRYQVHDRIDFMVGDLLTPLGQDNAGLDIVVANLPYVPTNEWEN 205 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 L LEV++F+PRI+LDGG DGL++YR + + L + G VEI +NQ ++ + + Sbjct: 206 LALEVKEFEPRIALDGGADGLAYYRRLMPQARQCLREGGYILVEIAWNQGPAMLSLMQH- 264 Query: 243 KLFL--VNAFKDYGGNDRVLL 261 F V +D G DRV++ Sbjct: 265 --FFDEVEVGQDLAGRDRVVV 283 >gi|229513824|ref|ZP_04403286.1| methylase of polypeptide chain release factors [Vibrio cholerae TMA 21] gi|229349005|gb|EEO13962.1| methylase of polypeptide chain release factors [Vibrio cholerae TMA 21] Length = 286 Score = 122 bits (305), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 89/260 (34%), Positives = 128/260 (49%), Gaps = 13/260 (5%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ LC V ++ PD +L+ L + R E + ILG R+F+++ L Sbjct: 27 DAAVLLCHVLAKPRSYLLTWPDKILEKPTLASLELLLARRRAGEPMAYILGEREFWSLPL 86 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV--RILDLGTGTGAVCLALLKESPFFK 123 +S T PRP+TE LV+ AL +K ++ +LDLGTGTGA+ LAL E P + Sbjct: 87 KVSPSTLIPRPDTERLVELAL-------DKAALIDGELLDLGTGTGAIALALASELPTRQ 139 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIESVIVD 181 G+D+ +A E+A+ NA + LQ WFS + F +IVSNPPYIE Sbjct: 140 VTGIDLRPEAAELARENATRLAI-HNAQFLQGSWFSPLADGTKFALIVSNPPYIEENDPH 198 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P+ +L +GL+ R I+ L G E GY+Q V V I Sbjct: 199 LSLGDVR-FEPKSALVAAENGLADIRHISTHAPHFLLDGGWLLFEHGYDQGVAVRTILRD 257 Query: 242 RKLFLVNAFKDYGGNDRVLL 261 + +DY G+DRV L Sbjct: 258 LGYQNIITEQDYAGHDRVTL 277 >gi|293409599|ref|ZP_06653175.1| hypothetical protein ECEG_00538 [Escherichia coli B354] gi|331672744|ref|ZP_08373530.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli TA280] gi|291470067|gb|EFF12551.1| hypothetical protein ECEG_00538 [Escherichia coli B354] gi|331069965|gb|EGI41334.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli TA280] Length = 277 Score = 122 bits (305), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 93/258 (36%), Positives = 128/258 (49%), Gaps = 8/258 (3%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 RD+ L VTG ++ ++ L D Q L + R E I + G R+F+++ Sbjct: 22 RDAEILLEHVTGKGRTFILAFGETQLTDEQCQQLDALLTRRRDGEPIAHLTGVREFWSLP 81 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L +S T PRP+TE LV+ ALA LP RILDLGTGTGA+ LAL E P + Sbjct: 82 LFVSPATLIPRPDTECLVEQALA-RLP----EQPCRILDLGTGTGAIALALASERPDCEI 136 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183 VD A+ +A+ NA N + LQSDWFS++ G F +IVSNPPYI+ Sbjct: 137 TAVDRMPDAVSLAQRNA-QNLAIKNIHILQSDWFSALAGHQFAMIVSNPPYIDEQDPHLQ 195 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 +VR F+P +L G++ I + L G +E G+ Q V + F Sbjct: 196 QGDVR-FEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFIHAG 254 Query: 244 LFLVNAFKDYGGNDRVLL 261 V +DYG N+RV L Sbjct: 255 YHDVETCRDYGDNERVTL 272 >gi|324994441|gb|EGC26354.1| protein-(glutamine-N5) methyltransferase [Streptococcus sanguinis SK678] Length = 276 Score = 122 bits (305), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 76/216 (35%), Positives = 113/216 (52%), Gaps = 8/216 (3%) Query: 46 LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLG 105 L H+ I+G DF+ + L + PRPETE LV+ L+ + + +LD+G Sbjct: 63 LAHKPAQYIIGSSDFHGLTLKVDERVLIPRPETEELVELILSEN-----PESSLSVLDIG 117 Query: 106 TGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF 165 TG+GA+ LAL P ++ D+S AL +A NA + G++ F +QSD ++ G F Sbjct: 118 TGSGAIALALANSRPNWQITASDLSDDALALAAENAQSCGLNLAF--VQSDCLDAISGNF 175 Query: 166 DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225 D+IVSNPPYI D +GL V +P ++L DG + YR IA+ +L K G + Sbjct: 176 DIIVSNPPYISEADKDEVGLNVLTSEPHMALFAEEDGYAVYRKIAEQAGDYLTKKGKIYL 235 Query: 226 EIGYNQKVDVVRIFESR-KLFLVNAFKDYGGNDRVL 260 EIGY Q + + E + KD G DR++ Sbjct: 236 EIGYKQGDGIRELLEKNFPQKRIRVLKDQFGKDRMV 271 >gi|115350467|ref|YP_772306.1| HemK family modification methylase [Burkholderia ambifaria AMMD] gi|115280455|gb|ABI85972.1| [protein release factor]-glutamine N5-methyltransferase [Burkholderia ambifaria AMMD] Length = 280 Score = 122 bits (305), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 86/262 (32%), Positives = 131/262 (50%), Gaps = 15/262 (5%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDR--QRFFLTNAIVRSLKHESIHRILGWRDFYNV 63 D+ L G + Q+I D+ L+ +R+ A R + E + +++G R+F+ Sbjct: 19 DARVLLAHALGWTRTQLITRGDAPLEPASIERYRALEA--RRVAGEPVAQLVGMREFFGR 76 Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 ++ D PRPETELLV++AL I+ R +LDLGTG+GA+ +++ E P + Sbjct: 77 PFDVTPDVLIPRPETELLVEAALDA----IDGRPHPAVLDLGTGSGAIAVSIAAERPDAR 132 Query: 124 GVGVDISCKALEIAKSNAVTNGVSER----FDTLQSDWFSSVEGL--FDVIVSNPPYIES 177 +D S AL++A+ NA + R LQSDW+++++ FD IVSNPPYI Sbjct: 133 VWALDRSPAALDVARRNADKLLDARRPGGPLHWLQSDWYAALDPALAFDTIVSNPPYIAQ 192 Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237 ++R F+PR +L DGLS RTI G L G +E GY+Q V Sbjct: 193 HDPHLAQGDLR-FEPRGALTDDADGLSAIRTIVAGAGAFLKPGGTLWIEHGYDQAEAVRA 251 Query: 238 IFESRKLFLVNAFKDYGGNDRV 259 + SR V + D +R Sbjct: 252 LLVSRGFVAVESLADLAAIERT 273 >gi|85375681|ref|YP_459743.1| protein chain release factor methylase subunit [Erythrobacter litoralis HTCC2594] gi|84788764|gb|ABC64946.1| protein chain release factor methylase subunit [Erythrobacter litoralis HTCC2594] Length = 283 Score = 122 bits (305), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 81/210 (38%), Positives = 119/210 (56%), Gaps = 17/210 (8%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101 + R L HE + I G ++F+ ++ D PR ++E +V++ALA E + R+ Sbjct: 57 VARRLHHEPLAYITGGQEFFGRGFIVTPDVLIPRSDSEQVVEAALA------EMGEGARV 110 Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW---- 157 LDLGTG+GA+ + LL E P G G+D S AL +A +NA NGV++R L++DW Sbjct: 111 LDLGTGSGALLVTLLAEHPDATGTGIDASLAALPVAAANAARNGVADRACLLKADWREPG 170 Query: 158 FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217 ++ G FD++++NPPY+E L VR F+PR +L G +GL YR I +S L Sbjct: 171 WTDDLGQFDLVIANPPYVEDNA--ALDASVRKFEPRAALYSGPEGLDDYRAIIPQLSSLL 228 Query: 218 NKDGLCSVEIGYNQKVDVVRI-----FESR 242 + DG+ +EIGY Q V I FESR Sbjct: 229 SSDGVAVLEIGYRQADAVGTIAEENGFESR 258 >gi|301017244|ref|ZP_07182025.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS 69-1] gi|300400375|gb|EFJ83913.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS 69-1] Length = 277 Score = 122 bits (305), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 93/258 (36%), Positives = 128/258 (49%), Gaps = 8/258 (3%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 RD+ L VTG ++ ++ L D Q L + R E I + G R+F+++ Sbjct: 22 RDAEILLEHVTGRGRTFILAFGETQLTDEQCQQLDALLTRRRDGEPIAHLTGVREFWSLP 81 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L +S T PRP+TE LV+ ALA LP RILDLGTGTGA+ LAL E P + Sbjct: 82 LFVSPATLIPRPDTECLVEQALA-RLP----EQPCRILDLGTGTGAIALALASERPDCEI 136 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183 VD A+ +A+ NA N + LQSDWFS++ G F +IVSNPPYI+ Sbjct: 137 TAVDRMPDAVALAQRNA-QNLAIKNIHILQSDWFSALAGQQFAMIVSNPPYIDEQDPHLQ 195 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 +VR F+P +L G++ I + L G +E G+ Q V + F Sbjct: 196 QGDVR-FEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFIHAG 254 Query: 244 LFLVNAFKDYGGNDRVLL 261 V +DYG N+RV L Sbjct: 255 YHDVETCRDYGDNERVTL 272 >gi|254374924|ref|ZP_04990405.1| modification methylase [Francisella novicida GA99-3548] gi|151572643|gb|EDN38297.1| modification methylase [Francisella novicida GA99-3548] Length = 284 Score = 122 bits (305), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 84/257 (32%), Positives = 136/257 (52%), Gaps = 10/257 (3%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 D +C V G+ + ++ D LD + I+R L E + ILG++ F+N + Sbjct: 26 HDLQMIICDVLGVDKTYLYINSDKQLDKNTLKKIDEKILRLLAGEPLAYILGYKYFWNQK 85 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALLKESPFFK 123 L ++ DT PR +TE +V A L I+ +D ++ILDLGTGTGA+ LAL E + Sbjct: 86 LYVTKDTLIPRADTETVV----ATVLDDIQNKDAQLKILDLGTGTGAIALALAAELANSQ 141 Query: 124 GVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181 V VD+ ++L++AK NA N ++ +F +QS W+++++ FD+IVSNPPYI+ + Sbjct: 142 VVAVDLYQQSLDVAKKNAQANNITNVKF--IQSSWYTNLDTDKFDIIVSNPPYIDLADTN 199 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 + V+D++P +L +GL+ + I LN G +E G+ Q + +F Sbjct: 200 -IDQSVKDYEPARALFAADNGLADIKIIISQSKYFLNPRGFIYIEHGFTQADAITVLFSQ 258 Query: 242 RKLFLVNAFKDYGGNDR 258 + KD NDR Sbjct: 259 YNFTDIKTVKDLNNNDR 275 >gi|115315349|ref|YP_764072.1| hemK methylase [Francisella tularensis subsp. holarctica OSU18] gi|254369839|ref|ZP_04985849.1| hypothetical protein FTAG_01187 [Francisella tularensis subsp. holarctica FSC022] gi|115130248|gb|ABI83435.1| hemK methylase [Francisella tularensis subsp. holarctica OSU18] gi|157122798|gb|EDO66927.1| hypothetical protein FTAG_01187 [Francisella tularensis subsp. holarctica FSC022] Length = 284 Score = 122 bits (305), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 85/257 (33%), Positives = 136/257 (52%), Gaps = 10/257 (3%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 D +C V G+ + ++ D LD + I+R L E + ILG++ F+N + Sbjct: 26 HDLQMIICDVLGVDKTYLYINSDKQLDKNTLKKIDEKILRLLAGEPLAYILGYKYFWNQK 85 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALLKESPFFK 123 L ++ DT PR +TE +V A L I+ +D ++ILDLGTGTGA+ LAL E + Sbjct: 86 LYVTKDTLIPRADTETVV----ATVLDDIQNKDAQLKILDLGTGTGAIALALAAELANSQ 141 Query: 124 GVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181 V VD+ ++L++AK NA N ++ +F +QS W+++++ FD+IVSNPPYI+ + Sbjct: 142 VVAVDLYQQSLDVAKKNAQANNITNVKF--IQSSWYTNLDTDKFDIIVSNPPYIDLADTN 199 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 + V+D++P +L +GL+ R I LN G +E G+ Q + +F Sbjct: 200 -IDQSVKDYEPARALFAADNGLADIRIIISQAKDFLNLGGFIYIEHGFTQADAITALFSQ 258 Query: 242 RKLFLVNAFKDYGGNDR 258 + KD NDR Sbjct: 259 CNFTDIKIVKDLNNNDR 275 >gi|332360649|gb|EGJ38458.1| protein-(glutamine-N5) methyltransferase [Streptococcus sanguinis SK49] Length = 276 Score = 122 bits (305), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 77/216 (35%), Positives = 115/216 (53%), Gaps = 8/216 (3%) Query: 46 LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLG 105 L H+ I+G DF+ + L + PRPETE LVD L+ + P + +LD+G Sbjct: 63 LVHKPAQYIIGSSDFHGLTLKVDERVLIPRPETEELVDLILSEN-PETS----LSVLDIG 117 Query: 106 TGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF 165 TG+GA+ LAL P ++ D+S AL +A NA ++G++ F +QSD +++ F Sbjct: 118 TGSGAIALALANSRPDWQITASDLSGDALSLATENAQSSGLNLVF--VQSDCLDAIQRKF 175 Query: 166 DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225 D+IVSNPPYI D +GL V +P ++L DG + YR IA+ +L K G + Sbjct: 176 DIIVSNPPYISEADKDEVGLNVLTSEPHMALFAEEDGYAVYRKIAEQAGDYLTKKGKIYL 235 Query: 226 EIGYNQKVDVVRIFESR-KLFLVNAFKDYGGNDRVL 260 EIGY Q + + E + KD G DR++ Sbjct: 236 EIGYKQGDGIRELLEKNFPQKRIRVLKDQFGKDRMV 271 >gi|258512738|ref|YP_003186172.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257479464|gb|ACV59783.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 313 Score = 122 bits (305), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 83/234 (35%), Positives = 126/234 (53%), Gaps = 26/234 (11%) Query: 46 LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLG 105 ++ E + +LG +DFY + D PRP+TE+LV+ A+ F L R+ R++D+G Sbjct: 80 VQGEPLAYVLGKQDFYGRTFEVGPDCLIPRPDTEVLVEEAIRF-LKRMPSG--TRVIDVG 136 Query: 106 TGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS--VEG 163 TG+G + +++ P VD+S AL +A+ NA ERF + DW ++ +E Sbjct: 137 TGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNA------ERFGAV-VDWAAADGIEW 189 Query: 164 LFD---------VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214 L + IVSNPPYI + +D L VRD++PR++LDGG DGL YR +A + Sbjct: 190 LIERAERGRPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMA-ALP 248 Query: 215 RHLNKDGLCSV--EIGYNQKVDVVRIFES--RKLFLVNAFKDYGGNDRVLLFCR 264 ++ G V E+G+NQ +V R+F + F V KD G DRV+ R Sbjct: 249 PYVLARGRAGVFLEVGHNQADEVARLFAPWRERGFRVRKVKDLRGIDRVIAVTR 302 >gi|315924272|ref|ZP_07920496.1| protein-(glutamine-N5) methyltransferase [Pseudoramibacter alactolyticus ATCC 23263] gi|315622433|gb|EFV02390.1| protein-(glutamine-N5) methyltransferase [Pseudoramibacter alactolyticus ATCC 23263] Length = 283 Score = 122 bits (305), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 78/224 (34%), Positives = 121/224 (54%), Gaps = 14/224 (6%) Query: 23 IVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLV 82 ++ P+ L Q NAI R HE I G R+F + +++ PRP+TE +V Sbjct: 48 LMHPEIPLSSEQIRAFANAIKRRSAHEPSAMITGHREFMGLDFDVNAHVLIPRPDTENIV 107 Query: 83 DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142 ++ALA+ I KR +LDL G+GA+ +AL P + DIS +AL IAKSNA Sbjct: 108 ETALAW----ISKRSRPEVLDLCCGSGAIGIALKNCCPNIQLWLSDISKEALAIAKSNAQ 163 Query: 143 TNGVSERFDTLQSDWFSSVEGL-----FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197 + + + + D F EGL FD+IV+NPPYI + + L ++++++PR++LD Sbjct: 164 KHHIEAQL--ILGDLF---EGLLPGQRFDMIVTNPPYIPTDEIADLSPDIKNYEPRVALD 218 Query: 198 GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 GG DG Y+ + V HL + G +E G+NQ ++ + S Sbjct: 219 GGEDGYDFYKRLFASVHDHLKEQGYLVLECGWNQADTLIDMAHS 262 >gi|126728794|ref|ZP_01744609.1| modification methylase, HemK family protein [Sagittula stellata E-37] gi|126710724|gb|EBA09775.1| modification methylase, HemK family protein [Sagittula stellata E-37] Length = 281 Score = 122 bits (305), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 83/261 (31%), Positives = 127/261 (48%), Gaps = 13/261 (4%) Query: 5 RDSHSFLCRVTGLSSHQV-IVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63 RD+ + V + ++ + P+ V + + +LT I R + ++G R FY Sbjct: 24 RDARRLMAHVLKVPPGRLTLFLPEEVDPELEVVYLT-LIERRADRVPVSHLVGRRAFYGR 82 Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 ++ + +PRPETE L++ AL+ +LDLGTG+G + L LL E Sbjct: 83 DFLVTPEVLDPRPETETLIEVALS--------EPFGTVLDLGTGSGCILLTLLAERDDAV 134 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS---VEGLFDVIVSNPPYIESVIV 180 G G D+S AL +A N + R + + W+ + ++ LFD+IVSNPPYI + Sbjct: 135 GYGTDVSASALNVAHWNRNALNLEGRAEFCEGSWYGALGQMDELFDLIVSNPPYIAVNEM 194 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 L EVRD +PR++L DG + Y I G +R L G EIG Q + V ++F Sbjct: 195 PFLSPEVRDHEPRLALTDEADGQTAYHAILAGHARWLAPGGRLVAEIGATQGMAVSKLFA 254 Query: 241 SRKLFLVNAFKDYGGNDRVLL 261 L V D G DRV++ Sbjct: 255 RAGLRGVRVIPDIDGRDRVVV 275 >gi|270292698|ref|ZP_06198909.1| N5 glutamine methyltransferase, release factor-specific protein [Streptococcus sp. M143] gi|270278677|gb|EFA24523.1| N5 glutamine methyltransferase, release factor-specific protein [Streptococcus sp. M143] Length = 278 Score = 121 bits (304), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 88/263 (33%), Positives = 130/263 (49%), Gaps = 19/263 (7%) Query: 6 DSHSFLCR-VTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 +S SF+ R + LS + + + ++ F+ + H+ I+G DF+ ++ Sbjct: 22 ESLSFVYRSLKNLSFTDFVFALQQEVTEEEKQFVEEIFQQLAAHKPAQYIIGQADFFGMQ 81 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALLKESPFFK 123 L + PRPETE LV+ LA E D +++LD+GTG+GA+ LAL K P + Sbjct: 82 LKVDERVLIPRPETEELVELILA------ENSDENLKVLDIGTGSGAIALALAKNRPDWS 135 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183 VDIS AL++A NA F +SD F+ + +D+IVSNPPYI + Sbjct: 136 VTAVDISQDALDLATENAKVQNFQIFFK--KSDCFAEISEKYDIIVSNPPYISREDESEV 193 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF---- 239 GL V +P ++L DGL+ YR IA+ L G +EIGY Q V +F Sbjct: 194 GLNVLHSEPHLALFADEDGLAIYRRIAEDAKDFLTDGGKIYLEIGYKQGQSVPALFRKHL 253 Query: 240 -ESRKLFLVNAFKDYGGNDRVLL 261 E R V KD G DR+++ Sbjct: 254 PEKR----VRTLKDQFGQDRMVV 272 >gi|168334107|ref|ZP_02692320.1| modification methylase, HemK family protein [Epulopiscium sp. 'N.t. morphotype B'] Length = 281 Score = 121 bits (304), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 81/260 (31%), Positives = 125/260 (48%), Gaps = 8/260 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A RD+ L + +I++ D ++++ I R HE + I +++F Sbjct: 23 ATRDARLLLMHLLSCDRATLIINNDKLVEEEIVATYFKYIDRRKNHEPLQYITHYQEFMG 82 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + + + PR +TELLV+ +A L++G G+G + ++LL Sbjct: 83 LPFYVDQNVLIPRQDTELLVEKLIALPWNHHPIG-----LEIGVGSGCISVSLLHYISNL 137 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVD 181 V DIS AL+IA NA N R + SD F ++ + FD IVSNPPYI ++ Sbjct: 138 TMVCSDISQAALDIAAKNASINACIPRIKFVHSDLFXNIPQQKFDFIVSNPPYIPKCEMN 197 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 L EV DF+P +L DGL+ YR IA ++ + G+ + EIGYNQ DV +I E Sbjct: 198 QLQPEVLDFEPAAALTDSGDGLAFYRAIATEAKKY--EIGILAFEIGYNQGPDVTKILEI 255 Query: 242 RKLFLVNAFKDYGGNDRVLL 261 + F DY RV++ Sbjct: 256 EGYQNIQLFYDYNNKHRVII 275 >gi|317491753|ref|ZP_07950188.1| methyltransferase [Enterobacteriaceae bacterium 9_2_54FAA] gi|316920187|gb|EFV41511.1| methyltransferase [Enterobacteriaceae bacterium 9_2_54FAA] Length = 280 Score = 121 bits (304), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 89/258 (34%), Positives = 129/258 (50%), Gaps = 8/258 (3%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 RD+ L V G S ++ ++ L Q L + R + E + +LG R+F+++ Sbjct: 22 RDAEILLGFVAGKSRSSILAFGETELTPEQVQQLELLLARRERGEPVAYLLGEREFWSLP 81 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L +S T PRP+TE LV+ ALA LP +LDLGTGTGA+ LAL E P + Sbjct: 82 LEVSPATLIPRPDTECLVEKALAL-LPVA----ACSVLDLGTGTGAIALALASERPDCQF 136 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183 VGVD S A +A NA ++ + W+ V F +I SNPPYI+ Sbjct: 137 VGVDYSADATALASRNASRLNIT-NVTFVTGSWYDPVGAQQFALIASNPPYIDESDPHLS 195 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 +VR F+P +L +GL+ R I + HL + G +E G+ Q V ++ ++R Sbjct: 196 QGDVR-FEPASALVAPENGLADLRHIVEYAPDHLIEGGWLIMEHGWQQGEAVRQLLKARG 254 Query: 244 LFLVNAFKDYGGNDRVLL 261 V KDYG NDR+ L Sbjct: 255 FTDVVTEKDYGNNDRITL 272 >gi|296159489|ref|ZP_06842313.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Burkholderia sp. Ch1-1] gi|295890197|gb|EFG69991.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Burkholderia sp. Ch1-1] Length = 281 Score = 121 bits (304), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 86/262 (32%), Positives = 130/262 (49%), Gaps = 15/262 (5%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDR--QRFFLTNAIVRSLKHESIHRILGWRDFYNV 63 ++ L V G Q+I D L +R+ A R E + +++G R+F+ + Sbjct: 20 EARILLTHVLGWRPTQLITRSDEPLQAEVVERYRALEA--RRAAGEPVAQLVGAREFFGL 77 Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 ++ PRPETELLV++ALA +E R+LDLGTGTGA+ +A+ P + Sbjct: 78 NFEVTPHVLIPRPETELLVETALAA----LENLARPRVLDLGTGTGAIAVAIASMRPDAQ 133 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDT----LQSDWFSSVEGL--FDVIVSNPPYIES 177 +D S +AL +A NA ++R QSDW+ S++ F VIVSNPPYI S Sbjct: 134 VWALDRSAEALAVATRNAARLLDAKRPGGAVVLTQSDWYGSLDAALRFHVIVSNPPYIAS 193 Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237 ++R F+PR +L DGLS R I G L G+ +E GY+Q V Sbjct: 194 GDPHLAQGDLR-FEPRGALTDEADGLSAIRAIIAGAPTRLAAGGVVWIEHGYDQAEAVRE 252 Query: 238 IFESRKLFLVNAFKDYGGNDRV 259 + ++ V + +D G +R+ Sbjct: 253 LLTAQGFMQVRSERDLAGIERI 274 >gi|254497856|ref|ZP_05110622.1| protein methyltransferase HemK [Legionella drancourtii LLAP12] gi|254352934|gb|EET11703.1| protein methyltransferase HemK [Legionella drancourtii LLAP12] Length = 261 Score = 121 bits (304), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 84/251 (33%), Positives = 130/251 (51%), Gaps = 7/251 (2%) Query: 10 FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69 LC + + + P+ +L D Q N + + I I G R+F+++ L ++ Sbjct: 12 LLCYLLKKNRAYLFAHPEELLSDEQFATYQNLLAERAQGVPIAYITGEREFWSLNLKVNR 71 Query: 70 DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129 T PR ETELLV+ AL ++ IL+LGTG+GA+ LAL KE P + V D+ Sbjct: 72 HTLIPRHETELLVELALE----KLPNSPNTCILELGTGSGAIALALAKERPQWHIVACDV 127 Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVR 188 S +AL IAK NA+ + +S SDW+S++ + + I+SNPPYI ++R Sbjct: 128 SEEALLIAKENALHHQLS-NVTFYHSDWYSNIPQQQYHAIISNPPYIAEQDPHLNEGDLR 186 Query: 189 DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN 248 F+P +L G GL+ I +L +G+ +E GY+QK++V I V Sbjct: 187 -FEPYNALASGQQGLADLLLIIKQGYDYLLPNGVLLLEHGYDQKLNVQAILIELGYKNVQ 245 Query: 249 AFKDYGGNDRV 259 ++KD G+DRV Sbjct: 246 SWKDIQGHDRV 256 >gi|325273243|ref|ZP_08139523.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Pseudomonas sp. TJI-51] gi|324101620|gb|EGB99186.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Pseudomonas sp. TJI-51] Length = 276 Score = 121 bits (304), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 79/214 (36%), Positives = 113/214 (52%), Gaps = 8/214 (3%) Query: 49 ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108 E + ILG + F+ + L ++ T PRP+TELLV++AL ++ R+LDLGTGT Sbjct: 65 EPVAYILGQQGFWKIDLEVAPHTLIPRPDTELLVETAL-----ELQPAAPARVLDLGTGT 119 Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDV 167 GA+ LAL E P ++ VD +A +A+ N +S L S WF S+ G FD+ Sbjct: 120 GAIALALASERPAWQVTAVDRVAEAAALAERNRQRLSLSNTQVRL-SHWFDSLAGERFDL 178 Query: 168 IVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227 IVSNPPYI + + +VR F+P +L G DGL R I HL G +E Sbjct: 179 IVSNPPYIAAADPHLVAGDVR-FEPSSALVAGPDGLDDLRVIVTQAPGHLVPGGWLLLEH 237 Query: 228 GYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 GY+Q V + + V + D GG++R+ L Sbjct: 238 GYDQAAAVRALLVEQGFNEVASRTDLGGHERISL 271 >gi|89256989|ref|YP_514351.1| modification methylase [Francisella tularensis subsp. holarctica LVS] gi|156503188|ref|YP_001429254.1| methyltransferase, HemK family protein [Francisella tularensis subsp. holarctica FTNF002-00] gi|167009370|ref|ZP_02274301.1| modification methylase [Francisella tularensis subsp. holarctica FSC200] gi|254368244|ref|ZP_04984264.1| modification methylase hemK [Francisella tularensis subsp. holarctica 257] gi|290954491|ref|ZP_06559112.1| methyltransferase, HemK family protein [Francisella tularensis subsp. holarctica URFT1] gi|295312096|ref|ZP_06802909.1| methyltransferase, HemK family protein [Francisella tularensis subsp. holarctica URFT1] gi|89144820|emb|CAJ80159.1| modification methylase [Francisella tularensis subsp. holarctica LVS] gi|134254054|gb|EBA53148.1| modification methylase hemK [Francisella tularensis subsp. holarctica 257] gi|156253791|gb|ABU62297.1| methyltransferase, HemK family protein [Francisella tularensis subsp. holarctica FTNF002-00] Length = 284 Score = 121 bits (304), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 85/257 (33%), Positives = 136/257 (52%), Gaps = 10/257 (3%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 D +C V G+ + ++ D LD + I+R L E + ILG++ F+N + Sbjct: 26 HDLQMIICDVLGVDKTYLYINSDKQLDKNTLKKIDEKILRLLAGEPLAYILGYKYFWNQK 85 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALLKESPFFK 123 L ++ DT PR +TE +V A L I+ +D ++ILDLGTGTGA+ LAL E + Sbjct: 86 LYVTKDTLIPRADTETVV----ATVLDDIQNKDAQLKILDLGTGTGAIALALAAELANSQ 141 Query: 124 GVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181 V VD+ ++L++AK NA N ++ +F +QS W+++++ FD+IVSNPPYI+ + Sbjct: 142 VVAVDLYQQSLDVAKKNAQANNITNVKF--IQSSWYTNLDTDKFDIIVSNPPYIDLADTN 199 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 + V+D++P +L +GL+ R I LN G +E G+ Q + +F Sbjct: 200 -IDQSVKDYEPARALFAADNGLADIRIIISQAKDFLNLGGFIYIEHGFTQADAITALFSQ 258 Query: 242 RKLFLVNAFKDYGGNDR 258 + KD NDR Sbjct: 259 CNFNDIKIVKDLNNNDR 275 >gi|167031790|ref|YP_001667021.1| protein-(glutamine-N5) methyltransferase [Pseudomonas putida GB-1] gi|166858278|gb|ABY96685.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Pseudomonas putida GB-1] Length = 276 Score = 121 bits (304), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 79/217 (36%), Positives = 114/217 (52%), Gaps = 14/217 (6%) Query: 49 ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108 E + ILG + F+ + L ++ T PRP+TELLV++AL ++ ++LDLGTGT Sbjct: 65 EPVAYILGQQGFWKIDLEVAPHTLIPRPDTELLVETAL-----ELQPAAPAKVLDLGTGT 119 Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ---SDWFSSVEG-L 164 GA+ LAL + P ++ VD +A +A+ N G D Q S WF S+ G Sbjct: 120 GAIALALASDRPAWQVTAVDRVEEAAALAERNRQRLG----LDNAQVRVSHWFDSLAGER 175 Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224 FD+IVSNPPYI + + +VR F+P +L G DGL R IA HL G Sbjct: 176 FDLIVSNPPYIAAEDPHLVAGDVR-FEPSSALVAGADGLDDLRVIAAQAPAHLLPGGWLL 234 Query: 225 VEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 +E GY+Q V + + V + D GG++R+ L Sbjct: 235 LEHGYDQAAAVRALLAEQGFVEVASRTDLGGHERITL 271 >gi|121593272|ref|YP_985168.1| HemK family modification methylase [Acidovorax sp. JS42] gi|120605352|gb|ABM41092.1| [protein release factor]-glutamine N5-methyltransferase [Acidovorax sp. JS42] Length = 280 Score = 121 bits (304), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 75/216 (34%), Positives = 109/216 (50%), Gaps = 9/216 (4%) Query: 43 VRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRIL 102 R K E + +LG ++F+ + L++ + +PRP+TE LV A++L + R R+ Sbjct: 62 ARRAKGEPVAYLLGRKEFWGLPLSVDARVLDPRPDTETLV----AWALEVLATRAAPRVA 117 Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162 DLGTG+GA+ LAL E P + + VD S AL +A++NA G+ RF +Q +W V+ Sbjct: 118 DLGTGSGAIALALQHERPDAQVLAVDASAGALAVARANAGQLGLPVRF--IQGNWLHGVD 175 Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL 222 G FD IVSNPPYI + L +P +L G DGL RTI L G Sbjct: 176 GPFDAIVSNPPYIPAQDPHLAALT---HEPLSALASGADGLEDIRTIVAQAPARLAPGGW 232 Query: 223 CSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258 +E G++Q V + V + D G R Sbjct: 233 LLLEHGWDQAEAVQALLRDAGFDQVQSRHDLAGIAR 268 >gi|222109994|ref|YP_002552258.1| type 12 methyltransferase [Acidovorax ebreus TPSY] gi|221729438|gb|ACM32258.1| Methyltransferase type 12 [Acidovorax ebreus TPSY] Length = 280 Score = 121 bits (304), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 75/216 (34%), Positives = 109/216 (50%), Gaps = 9/216 (4%) Query: 43 VRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRIL 102 R K E + +LG ++F+ + L++ + +PRP+TE LV A++L + R R+ Sbjct: 62 ARRAKGEPVAYLLGRKEFWGLPLSVDARVLDPRPDTETLV----AWALEVLATRAAPRVA 117 Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162 DLGTG+GA+ LAL E P + + VD S AL +A++NA G+ RF +Q +W V+ Sbjct: 118 DLGTGSGAIALALQHERPDAQVLAVDASADALAVARANAGQLGLPVRF--IQGNWLHGVD 175 Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL 222 G FD IVSNPPYI + L +P +L G DGL RTI L G Sbjct: 176 GSFDAIVSNPPYIAAQDPHLAALT---HEPLSALASGADGLEDIRTIVAQAPARLAPGGW 232 Query: 223 CSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258 +E G++Q V + V + D G R Sbjct: 233 LLLEHGWDQAEAVQALLRDAGFDQVQSRHDLAGIAR 268 >gi|148981992|ref|ZP_01816580.1| HemK protein [Vibrionales bacterium SWAT-3] gi|145960680|gb|EDK26024.1| HemK protein [Vibrionales bacterium SWAT-3] Length = 290 Score = 121 bits (304), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 90/268 (33%), Positives = 127/268 (47%), Gaps = 23/268 (8%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ LC ++ P++ L Q + R L E + I+G R+F+++ L Sbjct: 29 DAAVLLCHALDKPRSYLLTWPETHLTSEQESEFQALLKRRLTGEPVAYIVGEREFWSLPL 88 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 +S T PRP+TE LV+ AL + + ILDLGTGTGA+ LAL E P Sbjct: 89 KVSPSTLIPRPDTERLVEVALDKTYGKQGA-----ILDLGTGTGAIALALASEMPNRPVT 143 Query: 126 GVDISCKALEIAKSNA----VTNGVSERFDTLQSDWFSSVEGL--------FDVIVSNPP 173 G+D+ +A +A NA +TN L WF + GL F +IVSNPP Sbjct: 144 GIDLRPEAQALATENAKRLNITNAT-----FLHGSWFDPLSGLASDGDEVKFSLIVSNPP 198 Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233 YIE +VR F+P +L GL+ R I++ L +G + E GY+Q + Sbjct: 199 YIEKDDPHLSQGDVR-FEPITALVAEEKGLADIRYISENARGFLEDEGWLAFEHGYDQGL 257 Query: 234 DVVRIFESRKLFLVNAFKDYGGNDRVLL 261 V I ++ V KDY GNDRV L Sbjct: 258 AVREIMQTLGYLDVVTEKDYCGNDRVTL 285 >gi|331266423|ref|YP_004326053.1| protoporphyrinogen oxidase [Streptococcus oralis Uo5] gi|326683095|emb|CBZ00713.1| protoporphyrinogen oxidase [Streptococcus oralis Uo5] Length = 278 Score = 121 bits (304), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 85/262 (32%), Positives = 131/262 (50%), Gaps = 17/262 (6%) Query: 6 DSHSFLCR-VTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 +S SF+ R + LS + + + + F+ + H+ I+G DF+ ++ Sbjct: 22 ESLSFVYRSLKNLSFTDFVFALQQEVTEEENQFVEEIYQQLAAHKPAQYIIGQADFFGMQ 81 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L + PRPET+ LV+ LA + ++ ++ILD+GTG+GA+ L L K P + Sbjct: 82 LKVDERVLIPRPETKELVELILAEN-----AKESLKILDIGTGSGAIALGLAKNRPDWSV 136 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184 DIS ALE+A NA ++ F +SD F+ + +D+IVSNPPYI +G Sbjct: 137 TAADISQDALELASENARNQNLNIFFK--KSDCFAEISEKYDIIVSNPPYISREDESEVG 194 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF----- 239 L V +P ++L DGL+ YR IA+ +L G +EIGY Q V +F Sbjct: 195 LNVLHSEPHLALFADEDGLAIYRRIAEDAKDYLTDGGKIYLEIGYKQGQSVPDLFRKNLP 254 Query: 240 ESRKLFLVNAFKDYGGNDRVLL 261 E R V KD G DR+++ Sbjct: 255 EKR----VRTLKDQFGQDRMVV 272 >gi|261400801|ref|ZP_05986926.1| protein-(glutamine-N5) methyltransferase [Neisseria lactamica ATCC 23970] gi|269209402|gb|EEZ75857.1| protein-(glutamine-N5) methyltransferase [Neisseria lactamica ATCC 23970] Length = 273 Score = 121 bits (304), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 85/221 (38%), Positives = 113/221 (51%), Gaps = 12/221 (5%) Query: 44 RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103 R L E + ILG R+FY R T++ PRPETE LV++ LA LP + R+ D Sbjct: 54 RRLNGEPVAYILGVREFYGRRFTVNPSVLIPRPETEHLVEAVLA-RLP-----ENGRVWD 107 Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS--- 160 LGTG+G V + + E P DIS ALE A+ NA G R + WF + Sbjct: 108 LGTGSGTVAVTVALERPDAFVRASDISPPALETARKNAADLGA--RVEFAHGSWFDTDMP 165 Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220 EG +D+IVSNPPYIE+ L ++R F+P+I+L DGLS RT+A G L + Sbjct: 166 SEGKWDIIVSNPPYIENGDKHLLQGDLR-FEPQIALTDFSDGLSCIRTLAQGAPDRLAEG 224 Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 G +E G++Q V + V D G DRV L Sbjct: 225 GFLLLEHGFDQGAAVRGVLAENGFSGVETLPDLAGLDRVTL 265 >gi|85059853|ref|YP_455555.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Sodalis glossinidius str. 'morsitans'] gi|84780373|dbj|BAE75150.1| putative protoporphyrinogen oxidase [Sodalis glossinidius str. 'morsitans'] Length = 282 Score = 121 bits (304), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 86/259 (33%), Positives = 134/259 (51%), Gaps = 10/259 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A D+ L + TG++ +++ ++ L D Q L + R + E + + G R+F++ Sbjct: 22 ARSDAEILLAQQTGVARTRLLAFGETPLTDAQHATLEALLARRERGEPVAYLTGEREFWS 81 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLP-RIEKRDVVRILDLGTGTGAVCLALLKESPF 121 + L +S+DT PRP+TE LV AL P R E +LDLGTG+GA+ LAL E P Sbjct: 82 LPLRVSADTLIPRPDTECLVQRALDLLSPGRAE------VLDLGTGSGAIALALASERPE 135 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIV 180 ++ G+D A+ +A++NA G+ + DWF ++ + +IVSNPPYI++ Sbjct: 136 WRITGIDRLPGAVALARANAARLGL-RNVQFHEGDWFKPLQAQRYRLIVSNPPYIKADDP 194 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 + +VR F+PR +L G DGL I G HL G +E G+ Q V + Sbjct: 195 HLMQGDVR-FEPRSALVAGEDGLQDLAAICRGAGAHLEPGGWLVLEHGWCQGAAVRGLLA 253 Query: 241 SRKLFLVNAFKDYGGNDRV 259 + +DYG N+RV Sbjct: 254 DTGFGQIATLRDYGDNERV 272 >gi|325143479|gb|EGC65800.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Neisseria meningitidis M01-240013] gi|325206969|gb|ADZ02422.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Neisseria meningitidis M04-240196] Length = 273 Score = 121 bits (304), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 85/221 (38%), Positives = 113/221 (51%), Gaps = 12/221 (5%) Query: 44 RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103 R L E + ILG R+FY R T++ PRPETE LV++ LA LP + R+ D Sbjct: 54 RRLNGEPVAYILGVREFYGRRFTVNPSVLIPRPETEHLVEAVLA-RLP-----ENGRVWD 107 Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS--- 160 LGTG+GAV + + E P DIS ALE A+ NA G R + WF + Sbjct: 108 LGTGSGAVAVTVALERPDAFVRTSDISTPALETARKNAADLGA--RVEFAHGSWFDTDMP 165 Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220 EG +D+I SNPPYIE+ L ++R F+P+I+L DGLS RT+A G L + Sbjct: 166 SEGKWDIIASNPPYIENGDKHLLQGDLR-FEPQIALTDFSDGLSCIRTLAQGAPDRLAEG 224 Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 G +E G++Q V + V D G DRV L Sbjct: 225 GFLLLEHGFDQGAAVRGVLAENGFSGVETLPDLAGLDRVTL 265 >gi|16760668|ref|NP_456285.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29141573|ref|NP_804915.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|213051785|ref|ZP_03344663.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213419807|ref|ZP_03352873.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] gi|213426496|ref|ZP_03359246.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213581390|ref|ZP_03363216.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] gi|213859592|ref|ZP_03385296.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|289827377|ref|ZP_06545997.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|25513362|pir||AI0719 HemK protein, probable protoporphyrinogen oxidase hemK [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16502964|emb|CAD02130.1| HemK protein, putative protoporphyrinogen oxidase [Salmonella enterica subsp. enterica serovar Typhi] gi|29137200|gb|AAO68764.1| HemK protein [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] Length = 277 Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 94/256 (36%), Positives = 131/256 (51%), Gaps = 8/256 (3%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 RD+ L VTG ++ ++ L D Q+ L + R + E I + G R+F+++ Sbjct: 22 RDAEILLEYVTGKRRTYIMAFGETPLTDVQQQQLAELLQRRKQGEPIAYLTGLREFWSLP 81 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L +S T PRP+TE LV+ ALA LP RILDLGTGTGA+ LAL E P + Sbjct: 82 LFVSPATLIPRPDTECLVEQALA-RLP----VKTCRILDLGTGTGAIALALACERPDCEV 136 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183 VD A+ +A NA + LQS WFS++ G FD+IVSNPPYI++ Sbjct: 137 TAVDRMPDAVALAIRNAEHLAI-RNVRILQSCWFSALSGQQFDMIVSNPPYIDAQDPHLS 195 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 +VR F+PR +L +G++ I D + L G +E G+ Q V F Sbjct: 196 EGDVR-FEPRSALVADENGMADLTHIIDNARQMLTPGGFLLLEHGWRQGEAVRAAFRRSG 254 Query: 244 LFLVNAFKDYGGNDRV 259 V +DYGGN+RV Sbjct: 255 YTDVETCRDYGGNERV 270 >gi|82544334|ref|YP_408281.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Shigella boydii Sb227] gi|157156593|ref|YP_001462465.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli E24377A] gi|300921822|ref|ZP_07137979.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS 182-1] gi|301327072|ref|ZP_07220354.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS 78-1] gi|81245745|gb|ABB66453.1| possible protoporphyrinogen oxidase [Shigella boydii Sb227] gi|157078623|gb|ABV18331.1| protein methyltransferase HemK [Escherichia coli E24377A] gi|300421748|gb|EFK05059.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS 182-1] gi|300846325|gb|EFK74085.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS 78-1] gi|332094776|gb|EGI99820.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Shigella boydii 3594-74] Length = 277 Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 92/258 (35%), Positives = 129/258 (50%), Gaps = 8/258 (3%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 RD+ L VTG ++ ++ L D Q L + R E I + G R+F+++ Sbjct: 22 RDAEILLEHVTGRGRTFILAFGETQLTDEQCQQLDALLTRRRDGEPIAHLTGGREFWSLP 81 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L +S T PRP+TE LV+ ALA LP RILDLGTGTGA+ LAL E P + Sbjct: 82 LFVSPATLIPRPDTECLVEQALA-RLP----EQPCRILDLGTGTGAIALALASERPDCEI 136 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183 + VD A+ +A+ NA + + LQSDWFS++ G F +IVSNPPYI+ Sbjct: 137 IAVDRMPDAVSLAQRNAQHLAI-KNIHILQSDWFSALAGQQFAMIVSNPPYIDEQDPHLQ 195 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 +VR F+P +L G++ I + L G +E G+ Q V + F Sbjct: 196 QGDVR-FEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFILAG 254 Query: 244 LFLVNAFKDYGGNDRVLL 261 V +DYG N+RV L Sbjct: 255 YHDVETCRDYGDNERVTL 272 >gi|161869127|ref|YP_001598293.1| HemK protein [Neisseria meningitidis 053442] gi|161594680|gb|ABX72340.1| HemK protein [Neisseria meningitidis 053442] Length = 234 Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 85/219 (38%), Positives = 113/219 (51%), Gaps = 12/219 (5%) Query: 46 LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLG 105 L E + ILG R+FY R T++ PRPETE LV++ LA LP + R+ DLG Sbjct: 17 LNGEPVAYILGVREFYGRRFTVNPSVLIPRPETEHLVEAVLA-RLP-----ENGRVWDLG 70 Query: 106 TGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS---VE 162 TG+GAV + + E P DIS ALE A+ NA G R + WF + E Sbjct: 71 TGSGAVAVTVALERPDAFVRASDISPPALETARENAADLGA--RVEFAHGSWFDTDMPSE 128 Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL 222 G +D+IVSNPPYIE+ L ++R F+P+I+L DGLS RT+A G L + G Sbjct: 129 GKWDIIVSNPPYIENGDKHLLQGDLR-FEPQIALTDFSDGLSCIRTLAQGAPDRLAEGGF 187 Query: 223 CSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 +E G++Q V + V D G DRV L Sbjct: 188 LLLEHGFDQGAAVRGVLAENGFSGVETLPDLAGLDRVTL 226 >gi|193077722|gb|ABO12580.2| methyl transferase [Acinetobacter baumannii ATCC 17978] Length = 273 Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 76/215 (35%), Positives = 113/215 (52%), Gaps = 12/215 (5%) Query: 49 ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108 E + + G + F+ + L ++SDT PRP+TE+L+++ L +LP+ I+DLGTGT Sbjct: 63 EPLAYVTGSQPFWTLDLKVTSDTLVPRPDTEVLIETVLNLNLPK-----NANIVDLGTGT 117 Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVE-GLFD 166 GA+ LAL E P + DI L++AK NA T+G+ +F WF ++E FD Sbjct: 118 GAIALALASERPNWFVTATDIYAPTLDVAKENAQTHGLHHVKFAC--GAWFEALEPQQFD 175 Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE 226 +IVSNPPYI+ + ++ +PR +L GL+ I L G ++E Sbjct: 176 LIVSNPPYIDP---EDEHMQALATEPRRALVADHHGLADIEIIIAQGKNWLKPQGWIALE 232 Query: 227 IGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 GY+Q V IF + +DYG NDRV L Sbjct: 233 HGYDQGQAVRGIFAEHGFSEIKTIQDYGQNDRVTL 267 >gi|308390164|gb|ADO32484.1| hemk protein [Neisseria meningitidis alpha710] Length = 273 Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 85/221 (38%), Positives = 113/221 (51%), Gaps = 12/221 (5%) Query: 44 RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103 R L E + ILG R+FY R T++ PRPETE LV++ LA LP + R+ D Sbjct: 54 RRLNGEPVAYILGVREFYGRRFTVNPSVLIPRPETEHLVEAVLA-RLP-----ENGRVWD 107 Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS--- 160 LGTG+GAV + + E P DIS ALE A+ NA G R + WF + Sbjct: 108 LGTGSGAVAVTVALERPDAFVRASDISTPALETARKNAADLGA--RVEFAHGSWFDTDMP 165 Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220 EG +D+IVSNPPYIE+ ++R F+P+I+L DGLS RT+A G L + Sbjct: 166 SEGKWDIIVSNPPYIENGDKHLSQGDLR-FEPQIALTDFSDGLSCIRTLAQGAPDRLAEG 224 Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 G +E G++Q V + V D G DRV L Sbjct: 225 GFLLLEHGFDQGAAVRGVLAENGFSGVETLPDLAGLDRVTL 265 >gi|296134390|ref|YP_003641637.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Thermincola sp. JR] gi|296032968|gb|ADG83736.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Thermincola potens JR] Length = 283 Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 78/260 (30%), Positives = 133/260 (51%), Gaps = 13/260 (5%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L + G+ ++ ++ ++VL D Q N + R E + + G ++F ++ Sbjct: 27 DAEVLLSYLLGMDRAKLYLNREAVLSDEQIGRFRNLVERRGLREPVAYLTGTKEFMSLDF 86 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 ++S PRP+TE+LV+ LA P + ++D+GTG+GA+ ++ P + Sbjct: 87 KVNSSVLIPRPDTEILVEEILAIK-PAL-------MVDVGTGSGAIAISAAYYLPETRVF 138 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPYIESVIVD 181 DIS +AL +A+ NA+ GVS+R + +Q + + D+I +N PYI ++ Sbjct: 139 ATDISPEALNLARENAINLGVSDRIEFVQGNLLTPFINRPNFRVDLIAANLPYIPGEVLK 198 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 L EVR ++P ++LDGG +GL Y+++ V R L G +EIGYNQ + Sbjct: 199 ELPDEVRKYEPALALDGGCEGLDLYKSLIGQVPRVLKSGGRLLMEIGYNQSGLLADFLTQ 258 Query: 242 RKLFL-VNAFKDYGGNDRVL 260 F + KD G DRV+ Sbjct: 259 IPCFSGIRVIKDLSGRDRVV 278 >gi|290508965|ref|ZP_06548336.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Klebsiella sp. 1_1_55] gi|289778359|gb|EFD86356.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Klebsiella sp. 1_1_55] Length = 282 Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 88/258 (34%), Positives = 130/258 (50%), Gaps = 8/258 (3%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 RD+ L VTG + ++ ++ L + L + R + E I ++G R+F+++ Sbjct: 22 RDAEILLGHVTGRARTWILAFGETTLSADEATTLEALLQRRQRGEPIAHLVGQREFWSLP 81 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L +S T PRP+TE LV+ ALA LP ILDLGTGTGA+ LAL E P + Sbjct: 82 LFVSPATLIPRPDTECLVEQALA-RLPAAP----CHILDLGTGTGAIALALASERPDCEV 136 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCL 183 VD+ A+ +A NA ++ QSDWFS++ G F +IVSNPPYI++ Sbjct: 137 TAVDVMPDAVALALRNAAHLDIAN-VTIRQSDWFSALAGQRFAMIVSNPPYIDAADPHLA 195 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 +VR F+P +L GL+ I ++L G +E G+ Q V +F Sbjct: 196 EGDVR-FEPLTALVAADQGLADLAQIIREGRQYLLPGGWMLLEHGWTQGEAVRALFREAG 254 Query: 244 LFLVNAFKDYGGNDRVLL 261 V +DYG N+R+ L Sbjct: 255 YLDVATCRDYGDNERLTL 272 >gi|331662615|ref|ZP_08363538.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli TA143] gi|331061037|gb|EGI33001.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli TA143] Length = 277 Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 93/258 (36%), Positives = 128/258 (49%), Gaps = 8/258 (3%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 RD+ L VTG ++ ++ L D Q L + R E I + G R+F+++ Sbjct: 22 RDAEILLEHVTGRGRTFILAFGETQLTDEQCQQLDALLTRRRDGEPIAHLTGVREFWSLP 81 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L +S T PRP+TE LV+ ALA LP RILDLGTGTGA+ LAL E P + Sbjct: 82 LFVSPATLIPRPDTECLVEQALA-RLP----EQPCRILDLGTGTGAIALALASERPDCEI 136 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183 VD A+ +A+ NA N + LQSDWFS++ G F +IVSNPPYI+ Sbjct: 137 TAVDRMPDAVSLAQRNA-QNLAIKNIHILQSDWFSALAGQQFAMIVSNPPYIDEQDPHLQ 195 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 +VR F+P +L G++ I + L G +E G+ Q V + F Sbjct: 196 QGDVR-FEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFILAG 254 Query: 244 LFLVNAFKDYGGNDRVLL 261 V +DYG N+RV L Sbjct: 255 YHDVETCRDYGDNERVTL 272 >gi|56707339|ref|YP_169235.1| hemK protein [Francisella tularensis subsp. tularensis SCHU S4] gi|110669809|ref|YP_666366.1| hemK protein [Francisella tularensis subsp. tularensis FSC198] gi|134301376|ref|YP_001121344.1| HemK family methyltransferase [Francisella tularensis subsp. tularensis WY96-3418] gi|224456402|ref|ZP_03664875.1| HemK family methyltransferase [Francisella tularensis subsp. tularensis MA00-2987] gi|254370016|ref|ZP_04986023.1| modification methylase [Francisella tularensis subsp. tularensis FSC033] gi|254874174|ref|ZP_05246884.1| methyltransferase [Francisella tularensis subsp. tularensis MA00-2987] gi|56603831|emb|CAG44802.1| hemK protein homolog [Francisella tularensis subsp. tularensis SCHU S4] gi|110320142|emb|CAL08185.1| hemK protein homolog [Francisella tularensis subsp. tularensis FSC198] gi|134049153|gb|ABO46224.1| methyltransferase, hemK family [Francisella tularensis subsp. tularensis WY96-3418] gi|151568261|gb|EDN33915.1| modification methylase [Francisella tularensis subsp. tularensis FSC033] gi|254840173|gb|EET18609.1| methyltransferase [Francisella tularensis subsp. tularensis MA00-2987] gi|282158464|gb|ADA77855.1| methyltransferase, hemK family protein [Francisella tularensis subsp. tularensis NE061598] Length = 284 Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 85/257 (33%), Positives = 136/257 (52%), Gaps = 10/257 (3%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 D +C V G+ + ++ D LD + I+R L E + ILG++ F+N + Sbjct: 26 HDLQMIICDVLGVDKTYLYINLDKQLDKNTLKKIDEKILRLLAGEPLAYILGYKYFWNQK 85 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALLKESPFFK 123 L ++ DT PR +TE +V A L I+ +D ++ILDLGTGTGA+ LAL E + Sbjct: 86 LYVTKDTLIPRADTETVV----ATVLDDIQNKDAQLKILDLGTGTGAIALALAAELANSQ 141 Query: 124 GVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181 V VD+ ++L++AK NA N ++ +F +QS W+++++ FD+IVSNPPYI+ + Sbjct: 142 VVAVDLYQQSLDVAKKNAQANNITNVKF--IQSSWYTNLDTDKFDIIVSNPPYIDLADTN 199 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 + V+D++P +L +GL+ R I LN G +E G+ Q + +F Sbjct: 200 -IDQSVKDYEPARALFAADNGLADIRIIISQAKDFLNLGGFIYIEHGFTQADAITALFSQ 258 Query: 242 RKLFLVNAFKDYGGNDR 258 + KD NDR Sbjct: 259 CNFTDIKIVKDLNNNDR 275 >gi|117919222|ref|YP_868414.1| HemK family modification methylase [Shewanella sp. ANA-3] gi|117611554|gb|ABK47008.1| modification methylase, HemK family [Shewanella sp. ANA-3] Length = 286 Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 78/234 (33%), Positives = 121/234 (51%), Gaps = 8/234 (3%) Query: 26 PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85 P+ L Q + R + + I+G R+F+++ ++ T PRP+TE+LV++A Sbjct: 48 PEKALTVEQWKRFQQMVQRRQQGVPVAHIVGEREFWSLPFIVNDTTLIPRPDTEILVETA 107 Query: 86 LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145 L L ++LDLGTGTGA+ LAL E ++ VD A+ +AK+N TN Sbjct: 108 LNLPL-----ESNAKVLDLGTGTGAIALALASERATWQITAVDKVEDAVALAKANR-TNL 161 Query: 146 VSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204 E+ + LQSDWFS+++ FD+IVSNPPYI+ +VR F+P+ +L +G + Sbjct: 162 KLEQVEILQSDWFSAIKAHDFDLIVSNPPYIDEADEHLHQGDVR-FEPQSALTAADEGFA 220 Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258 IA +L +G +E G+ Q V + V +D+G NDR Sbjct: 221 DLYYIAKTARDYLKPNGYILLEHGFEQAVKLREKLTELGYQNVATVRDFGSNDR 274 >gi|323977217|gb|EGB72304.1| protein-(glutamine-N5) methyltransferase [Escherichia coli TW10509] Length = 277 Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 92/258 (35%), Positives = 128/258 (49%), Gaps = 8/258 (3%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 RD+ L VTG ++ ++ L D Q L + R E I + G R+F+++ Sbjct: 22 RDAEILLEHVTGKGRTFILAFGETQLTDEQCQQLDALLTRRRDGEPIAHLTGVREFWSLP 81 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L +S T PRP+TE LV+ ALA LP RILDLGTGTGA+ LAL E P + Sbjct: 82 LFVSPATLIPRPDTECLVEQALA-RLP----EQPCRILDLGTGTGAIALALASERPDCEI 136 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183 VD A+ +A+ NA + + LQSDWFS++ G F +IVSNPPYI+ Sbjct: 137 TAVDRMPDAVSLAQRNAQHLAI-KNIHILQSDWFSALAGQQFAMIVSNPPYIDEQDPHLQ 195 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 +VR F+P +L G++ I + L G +E G+ Q V + F Sbjct: 196 QGDVR-FEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFIHAG 254 Query: 244 LFLVNAFKDYGGNDRVLL 261 V +DYG N+RV L Sbjct: 255 YHDVETCRDYGDNERVTL 272 >gi|123967879|ref|YP_001008737.1| putative protein methyltransferase [Prochlorococcus marinus str. AS9601] gi|123197989|gb|ABM69630.1| putative protein methyltransferase [Prochlorococcus marinus str. AS9601] Length = 289 Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 74/220 (33%), Positives = 116/220 (52%), Gaps = 9/220 (4%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101 ++RS + + + WRD ++L +++ PRPETEL+VD + F++ R K + + Sbjct: 69 LIRSCPIQYLCGLTYWRD---LKLKVTNKVLIPRPETELIVD--IVFNIFR-RKSEKLFF 122 Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 +LGTG+GA+ +AL PF KGV D+ ALEIA N + + +W+S + Sbjct: 123 AELGTGSGAISIALALAYPFSKGVATDVDQDALEIATKNYINSSKQSNLKFYCGNWWSPL 182 Query: 162 E---GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 E G D+ +SNPPYI + L EV++F+P+++L GG DGL H R I L Sbjct: 183 ENFKGKLDLAISNPPYIPKDTYEKLPKEVKNFEPKVALLGGEDGLKHIREIIQKAPIFLK 242 Query: 219 KDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258 + G +E ++Q V ++F K + KD G R Sbjct: 243 EKGWLILENHFDQGEKVKQLFIKNKFTSIEIVKDLSGIGR 282 >gi|91069911|gb|ABE10840.1| putative protein methyltransferase [uncultured Prochlorococcus marinus clone ASNC2150] Length = 289 Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 75/220 (34%), Positives = 116/220 (52%), Gaps = 9/220 (4%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101 ++RS + + I WRD ++L +++ PRPETEL+VD + F++ R K + + Sbjct: 69 LIRSCPIQYLCGITYWRD---LKLKVTNKVLIPRPETELIVD--IVFNVFR-RKSEKLFF 122 Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 +LGTG+GA+ +AL PF +GV DI ALEIA N + + +W+S + Sbjct: 123 AELGTGSGAISIALALSYPFSEGVATDIDQDALEIANKNYINSSKQSNLKFYCGNWWSPL 182 Query: 162 E---GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 E G D+ +SNPPYI + L EV++F+P+++L GG DGL H R I L Sbjct: 183 ENFKGKLDLAISNPPYIPKDTYEKLPKEVKNFEPKVALLGGEDGLKHIREIIQKAPIFLK 242 Query: 219 KDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258 + G +E ++Q V ++F K + KD G R Sbjct: 243 EKGWLILENHFDQGEKVKQLFIKNKFTSIEIVKDLSGIGR 282 >gi|269958474|ref|YP_003328261.1| putative HemK family modification methylase [Anaplasma centrale str. Israel] gi|269848303|gb|ACZ48947.1| putative HemK family modification methylase [Anaplasma centrale str. Israel] Length = 282 Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 78/228 (34%), Positives = 121/228 (53%), Gaps = 8/228 (3%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQ--RFFLTNAIVRSLKHESIHRILGWRDFYNV 63 D+ + G+S+ ++VD D ++ + RFF + R L E + ILG R+F+ + Sbjct: 25 DAELIAQQALGISAIAMLVDADMPVEQERADRFFAL--LDRRLSGEPVSHILGKREFWGM 82 Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 ++SD +PR +TE +V SA+ + + + R++ I DLGTGTG + +ALL Sbjct: 83 DFAVNSDVLDPRADTESVVSSAI--KIYKNQNRNLT-IADLGTGTGCILIALLSHYRHAT 139 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183 GV + S KA +A+ N V + + R + W EG FD+IVSNPPYI + L Sbjct: 140 GVAFEKSVKAYRVARQNFVRHSMLARVKLRCASW-ERCEGKFDLIVSNPPYIRRCKIPGL 198 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231 EVR +P +LDGG+ G+ Y I + + L G +EIG +Q Sbjct: 199 QREVRQHEPLRALDGGVRGMEAYTQIFKVLKKCLRPSGRAILEIGEDQ 246 >gi|16129175|ref|NP_415730.1| N5-glutamine methyltransferase, modifies release factors RF-1 and RF-2 [Escherichia coli str. K-12 substr. MG1655] gi|24112611|ref|NP_707121.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Shigella flexneri 2a str. 301] gi|30062736|ref|NP_836907.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Shigella flexneri 2a str. 2457T] gi|89108057|ref|AP_001837.1| N5-glutamine methyltransferase, modifies release factors RF-1 and RF-2 [Escherichia coli str. K-12 substr. W3110] gi|157160717|ref|YP_001458035.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli HS] gi|170020421|ref|YP_001725375.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli ATCC 8739] gi|170080840|ref|YP_001730160.1| release factors RF-1 and RF-2 N5-glutamine methyltransferase [Escherichia coli str. K-12 substr. DH10B] gi|187731012|ref|YP_001879995.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Shigella boydii CDC 3083-94] gi|188492205|ref|ZP_02999475.1| protein methyltransferase HemK [Escherichia coli 53638] gi|218553766|ref|YP_002386679.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli IAI1] gi|238900443|ref|YP_002926239.1| N5-glutamine methyltransferase, modifies release factors RF-1 and RF-2 [Escherichia coli BW2952] gi|256018538|ref|ZP_05432403.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Shigella sp. D9] gi|256023111|ref|ZP_05436976.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia sp. 4_1_40B] gi|260854873|ref|YP_003228764.1| N5-glutamine methyltransferase [Escherichia coli O26:H11 str. 11368] gi|260867617|ref|YP_003234019.1| N5-glutamine methyltransferase [Escherichia coli O111:H- str. 11128] gi|300816903|ref|ZP_07097123.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS 107-1] gi|300951679|ref|ZP_07165503.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS 116-1] gi|300955612|ref|ZP_07167969.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS 175-1] gi|301029485|ref|ZP_07192567.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS 196-1] gi|312971399|ref|ZP_07785574.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli 1827-70] gi|331652250|ref|ZP_08353269.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli M718] gi|331667596|ref|ZP_08368460.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli TA271] gi|332279598|ref|ZP_08392011.1| protoporphyrinogen oxidase hemK [Shigella sp. D9] gi|81170789|sp|P0ACC1|HEMK_ECOLI RecName: Full=Protein methyltransferase hemK; AltName: Full=M.EcoKHemKP; AltName: Full=Protein-(glutamine-N(5)) MTase hemK; AltName: Full=Protein-glutamine N-methyltransferase hemK gi|81170790|sp|P0ACC2|HEMK_SHIFL RecName: Full=Protein methyltransferase hemK; AltName: Full=Protein-(glutamine-N(5)) MTase hemK; AltName: Full=Protein-glutamine N-methyltransferase hemK gi|50513699|pdb|1T43|A Chain A, Crystal Structure Analysis Of E.Coli Protein (N5)-Glutamine Methyltransferase (Hemk) gi|968931|gb|AAC43438.1| possible protoporphyrinogen oxidase [Escherichia coli] gi|1651602|dbj|BAA36070.1| N5-glutamine methyltransferase, modifies release factors RF-1 and RF-2 [Escherichia coli str. K12 substr. W3110] gi|1787463|gb|AAC74296.1| N5-glutamine methyltransferase, modifies release factors RF-1 and RF-2 [Escherichia coli str. K-12 substr. MG1655] gi|18376673|dbj|BAB84109.1| protein-(glutamine-N5) methyl transferase [Escherichia coli] gi|24051516|gb|AAN42828.1| possible protoporphyrinogen oxidase [Shigella flexneri 2a str. 301] gi|30040984|gb|AAP16714.1| possible protoporphyrinogen oxidase [Shigella flexneri 2a str. 2457T] gi|157066397|gb|ABV05652.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli HS] gi|169755349|gb|ACA78048.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli ATCC 8739] gi|169888675|gb|ACB02382.1| release factors RF-1 and RF-2 N5-glutamine methyltransferase [Escherichia coli str. K-12 substr. DH10B] gi|187428004|gb|ACD07278.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Shigella boydii CDC 3083-94] gi|188487404|gb|EDU62507.1| protein methyltransferase HemK [Escherichia coli 53638] gi|218360534|emb|CAQ98092.1| N5-glutamine methyltransferase, modifies release factors RF-1 and RF-2 [Escherichia coli IAI1] gi|238861844|gb|ACR63842.1| N5-glutamine methyltransferase, modifies release factors RF-1 and RF-2 [Escherichia coli BW2952] gi|257753522|dbj|BAI25024.1| N5-glutamine methyltransferase [Escherichia coli O26:H11 str. 11368] gi|257763973|dbj|BAI35468.1| N5-glutamine methyltransferase [Escherichia coli O111:H- str. 11128] gi|260449653|gb|ACX40075.1| modification methylase, HemK family [Escherichia coli DH1] gi|281600636|gb|ADA73620.1| Protein methyltransferase hemK [Shigella flexneri 2002017] gi|299877628|gb|EFI85839.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS 196-1] gi|300317505|gb|EFJ67289.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS 175-1] gi|300449125|gb|EFK12745.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS 116-1] gi|300530677|gb|EFK51739.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS 107-1] gi|310335996|gb|EFQ01196.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli 1827-70] gi|313649401|gb|EFS13832.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Shigella flexneri 2a str. 2457T] gi|315135848|dbj|BAJ43007.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli DH1] gi|320174902|gb|EFW50021.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Shigella dysenteriae CDC 74-1112] gi|320185615|gb|EFW60377.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Shigella flexneri CDC 796-83] gi|323153189|gb|EFZ39451.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli EPECa14] gi|323179273|gb|EFZ64843.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli 1180] gi|323942491|gb|EGB38659.1| protein-(glutamine-N5) methyltransferase [Escherichia coli E482] gi|323947505|gb|EGB43509.1| protein-(glutamine-N5) methyltransferase [Escherichia coli H120] gi|324117240|gb|EGC11147.1| protein-(glutamine-N5) methyltransferase [Escherichia coli E1167] gi|331050528|gb|EGI22586.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli M718] gi|331065181|gb|EGI37076.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli TA271] gi|332101950|gb|EGJ05296.1| protoporphyrinogen oxidase hemK [Shigella sp. D9] gi|332757865|gb|EGJ88192.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Shigella flexneri 4343-70] gi|332759447|gb|EGJ89755.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Shigella flexneri 2747-71] gi|332760306|gb|EGJ90596.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Shigella flexneri K-671] gi|332767446|gb|EGJ97640.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Shigella flexneri 2930-71] gi|333005051|gb|EGK24571.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Shigella flexneri VA-6] gi|333005663|gb|EGK25181.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Shigella flexneri K-218] gi|333007545|gb|EGK27023.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Shigella flexneri K-272] gi|333019222|gb|EGK38509.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Shigella flexneri K-304] gi|333019925|gb|EGK39197.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Shigella flexneri K-227] Length = 277 Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 92/258 (35%), Positives = 129/258 (50%), Gaps = 8/258 (3%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 RD+ L VTG ++ ++ L D Q L + R E I + G R+F+++ Sbjct: 22 RDAEILLEHVTGRGRTFILAFGETQLTDEQCQQLDALLTRRRDGEPIAHLTGVREFWSLP 81 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L +S T PRP+TE LV+ ALA LP RILDLGTGTGA+ LAL E P + Sbjct: 82 LFVSPATLIPRPDTECLVEQALA-RLP----EQPCRILDLGTGTGAIALALASERPDCEI 136 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183 + VD A+ +A+ NA + + LQSDWFS++ G F +IVSNPPYI+ Sbjct: 137 IAVDRMPDAVSLAQRNAQHLAI-KNIHILQSDWFSALAGQQFAMIVSNPPYIDEQDPHLQ 195 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 +VR F+P +L G++ I + L G +E G+ Q V + F Sbjct: 196 QGDVR-FEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFILAG 254 Query: 244 LFLVNAFKDYGGNDRVLL 261 V +DYG N+RV L Sbjct: 255 YHDVETCRDYGDNERVTL 272 >gi|195978152|ref|YP_002123396.1| methylase of polypeptide chain release factors [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|195974857|gb|ACG62383.1| methylase of polypeptide chain release factors [Streptococcus equi subsp. zooepidemicus MGCS10565] Length = 282 Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 86/248 (34%), Positives = 126/248 (50%), Gaps = 19/248 (7%) Query: 17 LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRP 76 L +Q + D L +R FL + +H S I G F ++ L + S PRP Sbjct: 41 LHQNQEVTSEDQAL--LERIFLALS-----QHVSPQYITGRAYFRDLVLAVDSRVLIPRP 93 Query: 77 ETELLVDSALAFSLPRIEKRDVVR--ILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134 ETE LV+ L ++ D R +LD+GTG+GA+ +AL K P ++ DIS AL Sbjct: 94 ETEELVELIL-------KENDATRKSVLDIGTGSGAIAIALKKARPNWQVTASDISADAL 146 Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194 +A SNA+ + V F+ +SD FS + G FD+IVSNPPYI D +GL V +P + Sbjct: 147 SLAYSNALDHHVEIAFE--ESDLFSKLSGQFDIIVSNPPYIAYEDKDEVGLNVYQSEPHL 204 Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDY 253 +L +G + YR I + S +L G EIGY Q + R+ R + KD Sbjct: 205 ALFAAENGFAIYRRIIEQASAYLTTSGKLYFEIGYKQGEGLKRLLSKRFPQKRIRVLKDM 264 Query: 254 GGNDRVLL 261 G +R+++ Sbjct: 265 LGKERMVV 272 >gi|293414489|ref|ZP_06657138.1| methyltransferase [Escherichia coli B185] gi|291434547|gb|EFF07520.1| methyltransferase [Escherichia coli B185] Length = 277 Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 92/258 (35%), Positives = 129/258 (50%), Gaps = 8/258 (3%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 RD+ L VTG ++ ++ L D Q L + R E I + G R+F+++ Sbjct: 22 RDAEILLEHVTGKGRTFILAFGETQLTDEQCQQLDALLTRRRDGEPIAHLTGVREFWSLP 81 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L +S T PRP+TE LV+ ALA LP RILDLGTGTGA+ LAL E P + Sbjct: 82 LFVSPATLIPRPDTECLVEQALA-RLP----EQPCRILDLGTGTGAIALALASERPDCEI 136 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183 + VD A+ +A+ NA + + LQSDWFS++ G F +IVSNPPYI+ Sbjct: 137 IAVDRMPDAVSLAQRNAQHLAI-KNIHILQSDWFSALAGQQFAMIVSNPPYIDEQDPHLQ 195 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 +VR F+P +L G++ I + L G +E G+ Q V + F Sbjct: 196 QGDVR-FEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFILAG 254 Query: 244 LFLVNAFKDYGGNDRVLL 261 V +DYG N+RV L Sbjct: 255 YHDVETCRDYGDNERVTL 272 >gi|225868514|ref|YP_002744462.1| methyltransferase [Streptococcus equi subsp. zooepidemicus] gi|225701790|emb|CAW99202.1| putative methyltransferase [Streptococcus equi subsp. zooepidemicus] Length = 282 Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 86/248 (34%), Positives = 126/248 (50%), Gaps = 19/248 (7%) Query: 17 LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRP 76 L +Q + D L +R FL + +H S I G F ++ L + S PRP Sbjct: 41 LHQNQEVTSEDQAL--LERIFLALS-----QHVSPQYITGRAYFRDLVLAVDSRVLIPRP 93 Query: 77 ETELLVDSALAFSLPRIEKRDVVR--ILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134 ETE LV+ L ++ D R +LD+GTG+GA+ +AL K P ++ DIS AL Sbjct: 94 ETEELVELIL-------KENDATRKSVLDIGTGSGAIAIALKKARPNWQVTASDISADAL 146 Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194 +A SNA+ + V F+ +SD FS + G FD+IVSNPPYI D +GL V +P + Sbjct: 147 SLAYSNALDHHVEIAFE--ESDLFSKLSGQFDIIVSNPPYIAYEDKDEVGLNVYQSEPHL 204 Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDY 253 +L +G + YR I + S +L G EIGY Q + R+ R + KD Sbjct: 205 ALFAAENGFAIYRRIIEQASAYLTTSGKLYFEIGYKQGEGLKRLLSKRFPQKRIRVLKDM 264 Query: 254 GGNDRVLL 261 G +R+++ Sbjct: 265 LGKERMVV 272 >gi|254226891|ref|ZP_04920459.1| hemK protein [Vibrio cholerae V51] gi|125620573|gb|EAZ48939.1| hemK protein [Vibrio cholerae V51] Length = 286 Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 89/260 (34%), Positives = 127/260 (48%), Gaps = 13/260 (5%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ LC V ++ PD L+ L + R E + ILG R+F+++ L Sbjct: 27 DAAVLLCHVLAKPRSYLLTWPDKTLEKPTLASLELLLARRRAGEPMAYILGEREFWSLPL 86 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV--RILDLGTGTGAVCLALLKESPFFK 123 +S T PRP+TE LV+ AL +K ++ +LDLGTGTGA+ LAL E P + Sbjct: 87 KVSPSTLIPRPDTERLVELAL-------DKAALIDGELLDLGTGTGAIALALASELPTRQ 139 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIESVIVD 181 G+D+ +A E+A+ NA + LQ WFS + F +IVSNPPYIE Sbjct: 140 VTGIDLRPEAAELARENATRLAI-HNAQFLQGSWFSPLADGTKFALIVSNPPYIEENDPH 198 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P+ +L +GL+ R I+ L G E GY+Q V V I Sbjct: 199 LSLGDVR-FEPKSALVAAENGLADIRHISTHAPHFLLDGGWLLFEHGYDQGVAVRTILRD 257 Query: 242 RKLFLVNAFKDYGGNDRVLL 261 + +DY G+DRV L Sbjct: 258 LGYQNIITEQDYAGHDRVTL 277 >gi|88192213|pdb|2B3T|A Chain A, Molecular Basis For Bacterial Class 1 Release Factor Methylation By Prmc Length = 276 Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 92/258 (35%), Positives = 129/258 (50%), Gaps = 8/258 (3%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 RD+ L VTG ++ ++ L D Q L + R E I + G R+F+++ Sbjct: 22 RDAEILLEHVTGRGRTFILAFGETQLTDEQCQQLDALLTRRRDGEPIAHLTGVREFWSLP 81 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L +S T PRP+TE LV+ ALA LP RILDLGTGTGA+ LAL E P + Sbjct: 82 LFVSPATLIPRPDTECLVEQALA-RLP----EQPCRILDLGTGTGAIALALASERPDCEI 136 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183 + VD A+ +A+ NA + + LQSDWFS++ G F +IVSNPPYI+ Sbjct: 137 IAVDRMPDAVSLAQRNAQHLAI-KNIHILQSDWFSALAGQQFAMIVSNPPYIDEQDPHLQ 195 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 +VR F+P +L G++ I + L G +E G+ Q V + F Sbjct: 196 QGDVR-FEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFILAG 254 Query: 244 LFLVNAFKDYGGNDRVLL 261 V +DYG N+RV L Sbjct: 255 YHDVETCRDYGDNERVTL 272 >gi|15801441|ref|NP_287458.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli O157:H7 EDL933] gi|15830971|ref|NP_309744.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli O157:H7 str. Sakai] gi|168750772|ref|ZP_02775794.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli O157:H7 str. EC4113] gi|168758137|ref|ZP_02783144.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli O157:H7 str. EC4401] gi|168764381|ref|ZP_02789388.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli O157:H7 str. EC4501] gi|168771101|ref|ZP_02796108.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli O157:H7 str. EC4486] gi|168776895|ref|ZP_02801902.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli O157:H7 str. EC4196] gi|168782568|ref|ZP_02807575.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli O157:H7 str. EC4076] gi|168787716|ref|ZP_02812723.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli O157:H7 str. EC869] gi|168801525|ref|ZP_02826532.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli O157:H7 str. EC508] gi|195939100|ref|ZP_03084482.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli O157:H7 str. EC4024] gi|208806533|ref|ZP_03248870.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli O157:H7 str. EC4206] gi|208815524|ref|ZP_03256703.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli O157:H7 str. EC4045] gi|208822687|ref|ZP_03263006.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli O157:H7 str. EC4042] gi|209396125|ref|YP_002270146.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli O157:H7 str. EC4115] gi|217328046|ref|ZP_03444128.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli O157:H7 str. TW14588] gi|254792682|ref|YP_003077519.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli O157:H7 str. TW14359] gi|261224944|ref|ZP_05939225.1| release factors RF-1 and RF-2 N5-glutamine methyltransferase [Escherichia coli O157:H7 str. FRIK2000] gi|261257199|ref|ZP_05949732.1| release factors RF-1 and RF-2 N5-glutamine methyltransferase [Escherichia coli O157:H7 str. FRIK966] gi|291282237|ref|YP_003499055.1| Protein-(Glutamine-N5) methyltransferase, release factor-specific [Escherichia coli O55:H7 str. CB9615] gi|12514925|gb|AAG56070.1|AE005338_10 possible protoporphyrinogen oxidase [Escherichia coli O157:H7 str. EDL933] gi|13361182|dbj|BAB35140.1| possible protoporphyrinogen oxidase [Escherichia coli O157:H7 str. Sakai] gi|187767812|gb|EDU31656.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli O157:H7 str. EC4196] gi|188015064|gb|EDU53186.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli O157:H7 str. EC4113] gi|189000050|gb|EDU69036.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli O157:H7 str. EC4076] gi|189354975|gb|EDU73394.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli O157:H7 str. EC4401] gi|189360088|gb|EDU78507.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli O157:H7 str. EC4486] gi|189365629|gb|EDU84045.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli O157:H7 str. EC4501] gi|189372472|gb|EDU90888.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli O157:H7 str. EC869] gi|189376321|gb|EDU94737.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli O157:H7 str. EC508] gi|208726334|gb|EDZ75935.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli O157:H7 str. EC4206] gi|208732172|gb|EDZ80860.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli O157:H7 str. EC4045] gi|208738172|gb|EDZ85855.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli O157:H7 str. EC4042] gi|209157525|gb|ACI34958.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli O157:H7 str. EC4115] gi|209772518|gb|ACI84571.1| possible protoporphyrinogen oxidase [Escherichia coli] gi|209772520|gb|ACI84572.1| possible protoporphyrinogen oxidase [Escherichia coli] gi|209772522|gb|ACI84573.1| possible protoporphyrinogen oxidase [Escherichia coli] gi|209772524|gb|ACI84574.1| possible protoporphyrinogen oxidase [Escherichia coli] gi|209772526|gb|ACI84575.1| possible protoporphyrinogen oxidase [Escherichia coli] gi|217318473|gb|EEC26899.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli O157:H7 str. TW14588] gi|254592082|gb|ACT71443.1| release factors RF-1 and RF-2 N5-glutamine methyltransferase [Escherichia coli O157:H7 str. TW14359] gi|290762110|gb|ADD56071.1| Protein-(Glutamine-N5) methyltransferase, release factor-specific [Escherichia coli O55:H7 str. CB9615] gi|320188004|gb|EFW62671.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli O157:H7 str. EC1212] gi|320643226|gb|EFX12427.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli O157:H- str. 493-89] gi|320648163|gb|EFX16839.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli O157:H- str. H 2687] gi|320653997|gb|EFX22071.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320659476|gb|EFX27045.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli O55:H7 str. USDA 5905] gi|320664613|gb|EFX31764.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli O157:H7 str. LSU-61] gi|326342760|gb|EGD66530.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli O157:H7 str. 1044] gi|326346387|gb|EGD70124.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli O157:H7 str. 1125] Length = 277 Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 92/258 (35%), Positives = 129/258 (50%), Gaps = 8/258 (3%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 RD+ L VTG ++ ++ L D Q L + R E I + G R+F+++ Sbjct: 22 RDAEILLEHVTGRGRTFILAFGETQLTDEQCQQLDALLTRRRDGEPIAHLTGVREFWSLP 81 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L +S T PRP+TE LV+ ALA LP RILDLGTGTGA+ LAL +E P + Sbjct: 82 LFVSPATLIPRPDTECLVEQALA-RLP----EQPCRILDLGTGTGAIALALARERPDCEI 136 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183 VD A+ +A+ NA + + LQSDWFS++ G F +IVSNPPYI+ Sbjct: 137 TAVDRMPDAVALAQRNAQHLAI-KNIHILQSDWFSALAGQQFAMIVSNPPYIDEQDPHLQ 195 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 +VR F+P +L G++ I + L G +E G+ Q V + F Sbjct: 196 QGDVR-FEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFILAG 254 Query: 244 LFLVNAFKDYGGNDRVLL 261 V +DYG N+RV L Sbjct: 255 YHDVETCRDYGDNERVTL 272 >gi|219849414|ref|YP_002463847.1| modification methylase, HemK family [Chloroflexus aggregans DSM 9485] gi|219543673|gb|ACL25411.1| modification methylase, HemK family [Chloroflexus aggregans DSM 9485] Length = 293 Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 82/256 (32%), Positives = 121/256 (47%), Gaps = 6/256 (2%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L + G S +V+ + + VL Q+ + R E + ++G F+ + L Sbjct: 34 DAELLLAHILGWSRARVVAEREVVLTPAQQEAFGALVERRAAREPVAYLIGHWPFFGLDL 93 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 + PRPETELLV+ LA + R + I D+G G+GA+ +AL P Sbjct: 94 VVDRRVLIPRPETELLVE--LALTEARRYADTQITIADIGVGSGAIAIALAIHVPHATVY 151 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185 GVD S AL +A N +S+R L+ D + V G D+IVSNPPY VD Sbjct: 152 GVDRSADALAVAARNVARYNLSDRVVLLEGDLLTPVPGPVDLIVSNPPYTILAEVDE--- 208 Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF-ESRKL 244 V ++P ++LDGG DGL YR + +L G +EIG Q V + ++ Sbjct: 209 SVYRYEPHLALDGGPDGLDCYRRLIAAAPAYLKPGGAILLEIGAWQAEAVAHLLNQALPH 268 Query: 245 FLVNAFKDYGGNDRVL 260 V +D G DRV+ Sbjct: 269 AEVGVQRDLAGRDRVV 284 >gi|46581320|ref|YP_012128.1| hemK protein [Desulfovibrio vulgaris str. Hildenborough] gi|46450742|gb|AAS97388.1| hemK protein [Desulfovibrio vulgaris str. Hildenborough] gi|311234982|gb|ADP87836.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Desulfovibrio vulgaris RCH1] Length = 295 Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 80/259 (30%), Positives = 126/259 (48%), Gaps = 10/259 (3%) Query: 10 FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69 LC L +++ PD ++++ + + R E + I+G ++F+ ++ Sbjct: 37 ILCHALSLRRIDIMLTPDRIVEEADCILFSELVARRATGEPLAYIVGEKEFFGRDFAVNP 96 Query: 70 DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129 T PRPETE L+++AL SL + R +D GTG+G + + L E G+ +D+ Sbjct: 97 STLIPRPETEHLIETALE-SL----RSGPARFVDAGTGSGCIAVTLCAERADLSGLALDM 151 Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVDCLGLEV 187 S AL A NA +GV++R ++ D+ +S+ G D+ SNPPYI L EV Sbjct: 152 SAPALATASHNARRHGVAQRLAFVRGDFTTSLLRSGSLDLYASNPPYISEAEYTGLSREV 211 Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF-- 245 RDF+PR +L G GL H I +R L G+ +E G Q D+ +F Sbjct: 212 RDFEPRSALVPGDTGLEHAAAIIAEATRVLRPHGILLMEFGCMQGADMASLFTPYSTLWE 271 Query: 246 LVNAFKDYGGNDRVLLFCR 264 +V +D G DR +F R Sbjct: 272 MVEVRRDLAGLDR-FIFAR 289 >gi|171779353|ref|ZP_02920317.1| hypothetical protein STRINF_01198 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171281970|gb|EDT47401.1| hypothetical protein STRINF_01198 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 276 Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 70/184 (38%), Positives = 102/184 (55%), Gaps = 7/184 (3%) Query: 48 HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTG 107 H S I G F ++ L + PRPETE LVD L + + +R+LD+GTG Sbjct: 65 HRSPQYITGKAYFRDLELAVDERVLIPRPETEELVDLVL-----KENSKADLRVLDIGTG 119 Query: 108 TGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDV 167 +GA+ ++L P ++ DIS AL++A+ N+ N VS D ++SD F + G FDV Sbjct: 120 SGAIAISLKSARPDWQVTASDISQGALQLAEENSKLNQVS--LDFVESDVFGQITGTFDV 177 Query: 168 IVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227 I+SNPPYI D +G+ V +P ++L DG + YR I +G HL+++G EI Sbjct: 178 IISNPPYIAYGDKDEVGMNVLASEPHLALFADEDGFAIYRQIIEGAGEHLSENGKLYFEI 237 Query: 228 GYNQ 231 GY Q Sbjct: 238 GYKQ 241 >gi|300906881|ref|ZP_07124555.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS 84-1] gi|301305582|ref|ZP_07211673.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS 124-1] gi|300401314|gb|EFJ84852.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS 84-1] gi|300839171|gb|EFK66931.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS 124-1] gi|315254828|gb|EFU34796.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli MS 85-1] Length = 277 Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 92/258 (35%), Positives = 129/258 (50%), Gaps = 8/258 (3%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 RD+ L VTG ++ ++ L D Q L + R E I + G R+F+++ Sbjct: 22 RDAEILLEHVTGKGRTFILAFGETQLTDEQCQQLDALLTRRRDGEPIAHLTGVREFWSLP 81 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L +S T PRP+TE LV+ ALA LP RILDLGTGTGA+ LAL +E P + Sbjct: 82 LFVSPATLIPRPDTECLVEQALA-RLP----EQPCRILDLGTGTGAIALALARERPDCEI 136 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183 VD A+ +A+ NA + + LQSDWFS++ G F +IVSNPPYI+ Sbjct: 137 TAVDRMPDAVALAQRNAQHLAI-KNIHILQSDWFSALAGQQFAMIVSNPPYIDEQDPHLQ 195 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 +VR F+P +L G++ I + L G +E G+ Q V + F Sbjct: 196 QGDVR-FEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFILAG 254 Query: 244 LFLVNAFKDYGGNDRVLL 261 V +DYG N+RV L Sbjct: 255 YHDVETCRDYGDNERVTL 272 >gi|226946180|ref|YP_002801253.1| Modification methylase HemK [Azotobacter vinelandii DJ] gi|226721107|gb|ACO80278.1| Modification methylase HemK [Azotobacter vinelandii DJ] Length = 276 Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 84/257 (32%), Positives = 129/257 (50%), Gaps = 8/257 (3%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L G + + P+ + + + R E + ILG + F+++ L Sbjct: 22 DAEWLLAAALGKPASYLRAWPEREVPEAPAVRFAADLARRRAGEPVAYILGRQGFWSLDL 81 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 ++ T PRP+TELLV++ALA LP +LDLGTG+GA+ LAL E P ++ Sbjct: 82 EVAPATLIPRPDTELLVETALAL-LPATP----AEVLDLGTGSGAIALALAAERPAWRLT 136 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLG 184 GVD +A+ +A+ N G+ L SDWFS+++G F +I NPPYI + Sbjct: 137 GVDRVMEAVALAERNRRRLGLGN-ATFLPSDWFSALDGRRFALIAGNPPYIAADDPHLAL 195 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 +VR F+P +L G DGL R I HL G +E G+ Q V + +R Sbjct: 196 GDVR-FEPASALVAGADGLDDIRRIVVEAPGHLQAGGWLLLEHGFEQAGAVRGLLTTRGF 254 Query: 245 FLVNAFKDYGGNDRVLL 261 V++ +D GG++R+ L Sbjct: 255 VEVHSRRDLGGHERISL 271 >gi|331646530|ref|ZP_08347633.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli M605] gi|281178398|dbj|BAI54728.1| putative methyltransferase [Escherichia coli SE15] gi|330911077|gb|EGH39587.1| methylase of polypeptide chain release factor [Escherichia coli AA86] gi|331045282|gb|EGI17409.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli M605] Length = 277 Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 92/258 (35%), Positives = 129/258 (50%), Gaps = 8/258 (3%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 RD+ L VTG ++ ++ L D Q L + R E I + G R+F+++ Sbjct: 22 RDAEILLEHVTGKGRTFILAFGETQLTDEQCQQLDALLTRRRDGEPIAHLTGVREFWSLP 81 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L +S T PRP+TE LV+ ALA LP RILDLGTGTGA+ LAL E P + Sbjct: 82 LFVSPATLIPRPDTECLVEQALA-RLP----EQPCRILDLGTGTGAIALALASERPDCEI 136 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183 + VD A+ +A+ NA + + LQSDWFS++ G F +IVSNPPYI+ Sbjct: 137 IAVDRMPDAVALAQRNAQHLAI-KNIHILQSDWFSALAGQQFAMIVSNPPYIDEQDPHLQ 195 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 +VR F+P +L G++ I + L G +E G+ Q V + F Sbjct: 196 QGDVR-FEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFILAG 254 Query: 244 LFLVNAFKDYGGNDRVLL 261 V +DYG N+RV L Sbjct: 255 YHDVETCRDYGDNERVTL 272 >gi|332202883|gb|EGJ16951.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptococcus pneumoniae GA47901] Length = 279 Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 80/237 (33%), Positives = 120/237 (50%), Gaps = 12/237 (5%) Query: 28 SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALA 87 V + ++ F+ N + H+ I+G DFY + L + PRPETE LV+ L Sbjct: 46 EVTTEEEKQFVENIYQQLAAHKPAQYIIGQADFYGMHLKVDERVLIPRPETEELVELILT 105 Query: 88 FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147 +L + +LD+GTG+GA+ LAL K P + D+S +ALE+A NA ++ Sbjct: 106 ENL-----ETNLSVLDIGTGSGAIALALAKNRPDWSVTAADVSQEALELASENASDQNLN 160 Query: 148 ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207 F +SD F+ + +D+IVSNPPYI +GL V +P ++L DGL+ Y Sbjct: 161 IFFK--KSDCFAEISEKYDIIVSNPPYISREDESEVGLNVLHSEPHLALFADEDGLAIYC 218 Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF---LVNAFKDYGGNDRVLL 261 IA+ +L G +EIGY Q V +F RK V KD G +R+++ Sbjct: 219 RIAEDAKDYLKDGGKIYLEIGYKQGQSVPELF--RKHLPEKKVRTLKDQFGQNRMVV 273 >gi|322385290|ref|ZP_08058935.1| protein-(glutamine-N5) methyltransferase [Streptococcus cristatus ATCC 51100] gi|321270549|gb|EFX53464.1| protein-(glutamine-N5) methyltransferase [Streptococcus cristatus ATCC 51100] Length = 276 Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 77/218 (35%), Positives = 115/218 (52%), Gaps = 12/218 (5%) Query: 46 LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLG 105 L H+ I+G DF+ + L + PRPETE LV+ L+ + + + +LD+G Sbjct: 63 LAHKPAQYIIGSSDFHGLTLKVDERVLIPRPETEELVELILSENPEK-----SLSVLDIG 117 Query: 106 TGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF 165 TG+GA+ LAL P ++ D+S AL +A NA + G+ F +QSD ++ G F Sbjct: 118 TGSGAIALALANSRPDWQITASDLSEDALALAAENAQSCGLDLAF--VQSDCMEAISGTF 175 Query: 166 DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225 D+IVSNPPYI D +GL V +P ++L DG + YR IA+ +L + G + Sbjct: 176 DIIVSNPPYISEADKDEVGLNVLTSEPHMALFAEEDGYAVYRKIAEQAGDYLTEKGKIYL 235 Query: 226 EIGYNQKVDVVRIFESRKLF---LVNAFKDYGGNDRVL 260 EIGY Q V + +K F + KD G DR++ Sbjct: 236 EIGYKQGDGVRELL--KKSFPQKRIRVLKDQFGKDRMV 271 >gi|149003881|ref|ZP_01828704.1| HemK protein [Streptococcus pneumoniae SP14-BS69] gi|237650078|ref|ZP_04524330.1| HemK protein [Streptococcus pneumoniae CCRI 1974] gi|237822153|ref|ZP_04597998.1| HemK protein [Streptococcus pneumoniae CCRI 1974M2] gi|147758111|gb|EDK65115.1| HemK protein [Streptococcus pneumoniae SP14-BS69] Length = 279 Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 79/239 (33%), Positives = 122/239 (51%), Gaps = 16/239 (6%) Query: 28 SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALA 87 V + ++ F+ + + H+ I+G DFY + L + PRPETE LV+ L Sbjct: 46 EVTTEEEKQFVEDIYQQLATHKPAQYIIGQADFYGMHLKVDERVLIPRPETEELVELILT 105 Query: 88 FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147 +L + +LD+GTG+GA+ LAL K P + DIS +AL++A+ NA + Sbjct: 106 ENL-----ETNLSVLDIGTGSGAIALALAKNRPAWSVTAADISQEALDLARENAKNQNL- 159 Query: 148 ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207 + +SD F+ + +D+IVSNPPYI +GL V +P ++L DGL+ YR Sbjct: 160 -QIFLKKSDCFTEISEKYDIIVSNPPYISREDESEVGLNVLYSEPHLALFADEDGLAIYR 218 Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF-----ESRKLFLVNAFKDYGGNDRVLL 261 IA+ + +L G +EIGY Q V +F E R V KD G +R+++ Sbjct: 219 RIAEDATDYLKDSGKIYLEIGYKQGQCVPELFRKHLPEKR----VRTLKDQFGQNRMVV 273 >gi|307704778|ref|ZP_07641674.1| protein-glutamine-N5 methyltransferase [Streptococcus mitis SK597] gi|307621687|gb|EFO00728.1| protein-glutamine-N5 methyltransferase [Streptococcus mitis SK597] Length = 278 Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 79/219 (36%), Positives = 113/219 (51%), Gaps = 16/219 (7%) Query: 48 HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTG 107 H+ I+G DFY ++L + PRPETE LV+ LA + P + +LD+GTG Sbjct: 65 HKPAQYIIGQADFYGMQLKVDERVLIPRPETEELVELILAEN-PETN----LSVLDIGTG 119 Query: 108 TGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDV 167 +GA+ LAL K P + DIS AL++A NA + + +SD F+ + +D+ Sbjct: 120 SGAIALALAKNRPDWSVKAADISQDALDVASENAKNQNL--QIFLKKSDCFTEISEKYDI 177 Query: 168 IVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227 IVSNPPYI +GL V +P ++L DGL+ YR IA+ +L G +EI Sbjct: 178 IVSNPPYISREDESEVGLNVLHSEPHLALFAAEDGLAIYRRIAEDAKDYLKDGGKIYLEI 237 Query: 228 GYNQKVDVVRIF-----ESRKLFLVNAFKDYGGNDRVLL 261 GY Q V +F E R V KD G DR+++ Sbjct: 238 GYKQGQSVPELFRKHLPEKR----VRTLKDQFGQDRMVV 272 >gi|193213806|ref|YP_001995005.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Chloroherpeton thalassium ATCC 35110] gi|193087283|gb|ACF12558.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Chloroherpeton thalassium ATCC 35110] Length = 294 Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 82/260 (31%), Positives = 132/260 (50%), Gaps = 8/260 (3%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 ++ L L + + D + +++R R L+ E + I+G +DF+ + L Sbjct: 31 NAELLLAHTLNLKRMDLYLKFDMPVTEQERQTFRELCKRRLEGEPVQYIIGNQDFFGLTL 90 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRD-VVRILDLGTGTGAVCLALLKESPFFKG 124 + S PRPETELLV+ AL SL +++ D ++ILD+GTG+G + LA + + Sbjct: 91 DVDSRVLIPRPETELLVEEALN-SLSQLDFGDEKIKILDIGTGSGCIALAFASQLSNAEI 149 Query: 125 VGVDISCKALEIAKSNAVTNGVSE--RF---DTLQSDWFSSVEGLFDVIVSNPPYIESVI 179 + VD+S +AL +AK N+ N + RF D L + ++ V G + +I+SNPPYI Sbjct: 150 LAVDVSSEALALAKQNSEKNKLKSEVRFLNIDMLSAHFYDEVPGSYHLIISNPPYIPIAE 209 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 D L +EVR+F+P I+L G Y IA +R L +GL E+ + V I Sbjct: 210 RDSLQVEVRNFEPAIALFVQ-QGFEFYEKIAQEAARLLKPNGLLCFELHADGATKVNIIL 268 Query: 240 ESRKLFLVNAFKDYGGNDRV 259 + + +DY G R+ Sbjct: 269 KKNGFEQIRFVQDYAGFSRI 288 >gi|225856676|ref|YP_002738187.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptococcus pneumoniae P1031] gi|225724378|gb|ACO20230.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptococcus pneumoniae P1031] Length = 279 Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 80/239 (33%), Positives = 120/239 (50%), Gaps = 16/239 (6%) Query: 28 SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALA 87 V + ++ F+ + + H+ I+G DFY + L + PRPETE LV+ L Sbjct: 46 EVTTEEEKQFVEDIYQQLAAHKPAQYIIGQADFYGMHLKVDERVLIPRPETEELVELILT 105 Query: 88 FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147 +L + +LD+GTG+GA+ LAL K P + D+S +ALE+A NA ++ Sbjct: 106 ENL-----ETNLSVLDIGTGSGAIALALAKNRPDWSVTAADVSQEALELASENASDQNLN 160 Query: 148 ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207 F +SD F+ + +D+IVSNPPYI +GL V +P ++L DGL+ Y Sbjct: 161 IFFK--KSDCFAEISEKYDIIVSNPPYISREDESEVGLNVLHSEPHLALFADEDGLAIYC 218 Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF-----ESRKLFLVNAFKDYGGNDRVLL 261 IA+ +L G +EIGY Q V +F E R V KD G DR+++ Sbjct: 219 RIAEDAKDYLKDGGKIYLEIGYKQGQSVPELFRKHLPEKR----VRTLKDQFGQDRMVV 273 >gi|161503113|ref|YP_001570225.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160864460|gb|ABX21083.1| hypothetical protein SARI_01178 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 277 Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 92/256 (35%), Positives = 128/256 (50%), Gaps = 8/256 (3%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 RD+ L VTG ++ ++ L Q+ L + R + E I + G R+F+++ Sbjct: 22 RDAEILLEHVTGKGRTYIMAFGETPLAATQQQQLAELLRRRKQGEPIAHLTGIREFWSLP 81 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L +S T PRP+TE LV+ ALA LP RILDLGTGTGA+ LAL E P Sbjct: 82 LFVSPATLIPRPDTECLVEQALA-RLP----VKTCRILDLGTGTGAIALALASERPDCDV 136 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183 VD A+ +A NA + LQS WFS++ G FD+IVSNPPYI++ Sbjct: 137 TAVDRMPDAVALAIRNAEHLAI-RNVRILQSCWFSALPGQQFDMIVSNPPYIDARDPHLS 195 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 +VR F+P +L +G++ I D + L G +E G+ Q V F Sbjct: 196 EGDVR-FEPLSALVADENGMADITHIIDHARQVLTPGGWLLLEHGWQQGEAVRATFRRAD 254 Query: 244 LFLVNAFKDYGGNDRV 259 V +DYGGN+RV Sbjct: 255 YTDVETCRDYGGNERV 270 >gi|149192360|ref|ZP_01870563.1| HemK protein [Vibrio shilonii AK1] gi|148833799|gb|EDL50833.1| HemK protein [Vibrio shilonii AK1] Length = 284 Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 89/258 (34%), Positives = 127/258 (49%), Gaps = 9/258 (3%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ LC V ++ P+ L + + R + E + ILG R+F+++ L Sbjct: 29 DAAVLLCHVLEKPRSYLLTWPEKALTSNEAEQFEALLNRRIAGEPVAYILGEREFWSLPL 88 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 ++ T PRP+TE LV+ AL +L + D ILDLGTGTGA+ LAL E + Sbjct: 89 NVAPSTLIPRPDTERLVELALDKAL--VNDGD---ILDLGTGTGAIALALASELKTRSVM 143 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL--FDVIVSNPPYIESVIVDCL 183 GVD +A+E+A+SNA ++ Q WF V+ + F VIVSNPPYI+ Sbjct: 144 GVDFQTEAVELARSNATKLNIT-NCQFAQGSWFEPVDLVHKFSVIVSNPPYIDENDPHLS 202 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 +VR F+P +L +GL+ TI HL + G E G+ Q V I + Sbjct: 203 QGDVR-FEPSTALVAENNGLADIETITAKAPTHLLEGGWLLFEHGFEQGQAVREILVNNG 261 Query: 244 LFLVNAFKDYGGNDRVLL 261 V +DY GNDRV L Sbjct: 262 FCHVVTEQDYAGNDRVTL 279 >gi|330502034|ref|YP_004378903.1| HemK family modification methylase [Pseudomonas mendocina NK-01] gi|328916320|gb|AEB57151.1| HemK family modification methylase [Pseudomonas mendocina NK-01] Length = 277 Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 87/240 (36%), Positives = 128/240 (53%), Gaps = 14/240 (5%) Query: 26 PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85 P+ LD Q+ + R E + ILG + F+++ L ++ T PRP+TELLV++A Sbjct: 42 PERDLDSAQQAQFNAFMQRRRSGEPVAYILGHQGFWSLDLEVAPHTLIPRPDTELLVETA 101 Query: 86 LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145 L LP + LDLGTGTGA+ LAL E P ++ GVD +A+ +A+ N Sbjct: 102 LDL-LPATP----LVALDLGTGTGAIALALASERPAWQVTGVDRIEEAVALAERNRQRLQ 156 Query: 146 V-SERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRD--FDPRISLDGGID 201 + + RF + S WFS++ G + +I+SNPPYI + D LE D F+P +L G D Sbjct: 157 LGNARF--VHSHWFSALPGQRYGLILSNPPYIRA---DDQHLEQGDVRFEPSSALVAGND 211 Query: 202 GLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 GL R I HL G +E G++Q VDV R+ V + +D GG++R+ L Sbjct: 212 GLDDIRAIIQAAPDHLLSGGWLLLEHGFDQAVDVRRLLADGGFVEVESRRDLGGHERISL 271 >gi|325199156|gb|ADY94612.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Neisseria meningitidis G2136] Length = 273 Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 85/221 (38%), Positives = 113/221 (51%), Gaps = 12/221 (5%) Query: 44 RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103 R L E + ILG R+FY R T++ PRPETE LV++ LA LP + R+ D Sbjct: 54 RRLNGEPVAYILGVREFYGRRFTVNPSVLIPRPETEHLVEAVLA-RLP-----ENGRVWD 107 Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS--- 160 LGTG+GAV + + E P DIS ALE A+ NA G R + WF + Sbjct: 108 LGTGSGAVAVTVALERPDAFVRASDISPPALETARKNAADLGA--RVEFAHGSWFDTDMP 165 Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220 EG +D+IVSNPPYIE+ ++R F+P+I+L DGLS RT+A G L + Sbjct: 166 SEGKWDIIVSNPPYIENGDKHLSQGDLR-FEPQIALTDFSDGLSCIRTLAQGAPDRLAEG 224 Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 G +E G++Q V + V D G DRV L Sbjct: 225 GFLLLEHGFDQGAAVRGVLAENGFSGVETLPDLAGLDRVTL 265 >gi|54298227|ref|YP_124596.1| hypothetical protein lpp2285 [Legionella pneumophila str. Paris] gi|53752012|emb|CAH13438.1| hypothetical protein lpp2285 [Legionella pneumophila str. Paris] Length = 287 Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 83/251 (33%), Positives = 128/251 (50%), Gaps = 7/251 (2%) Query: 10 FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69 LC V + + PD+++ Q I + + I I G R+F+++ L ++ Sbjct: 29 LLCHVLNKNRAYLFAHPDALVSPEQIETYLQMIKQRAEGLPIAYITGQREFWSLSLKVTP 88 Query: 70 DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129 + PR ETE LV+ AL I ++ V +LDLGTG+GA+ LAL KE P + D Sbjct: 89 NVLIPRHETERLVELALEL----IPDKENVSVLDLGTGSGAIALALAKERPLWHIDACDF 144 Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVR 188 S +ALE+A+ NA T G++ + S WF+++ + IVSNPPYI +VR Sbjct: 145 SKEALELARYNAKTLGLN-NINFYHSCWFNNLPLKQYHAIVSNPPYIAENDPHLKQGDVR 203 Query: 189 DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN 248 F+P +L DGL+ + I +L DGL VE G+ QK ++ I ++ Sbjct: 204 -FEPTSALVSSQDGLADLQYIIQHSYEYLLPDGLLLVEHGFEQKNEISAILNQLGYKNIH 262 Query: 249 AFKDYGGNDRV 259 ++D G+DRV Sbjct: 263 CWQDLQGHDRV 273 >gi|313107326|ref|ZP_07793521.1| putative methyl transferase [Pseudomonas aeruginosa 39016] gi|310880023|gb|EFQ38617.1| putative methyl transferase [Pseudomonas aeruginosa 39016] Length = 276 Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 85/257 (33%), Positives = 129/257 (50%), Gaps = 8/257 (3%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L G + P+ ++ + I R E + ILG + F+++ L Sbjct: 22 DTELLLAAAMGKPRSFLRTWPERIVPREANERFDDWIARRRNGEPVAYILGHQGFWSLDL 81 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 ++ T PRP+TELLV++ALA +LDLGTGTGA+ LAL E P + Sbjct: 82 EVAPHTLIPRPDTELLVETALATL-----AAGTATVLDLGTGTGAIALALASERPLWTVT 136 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLG 184 VD +A+ +A+ N + E + +S WFS+++G F +IV NPPYI + Sbjct: 137 AVDRVEEAVALAERNR-QRLLLENVEVRRSHWFSALDGRRFRMIVGNPPYIPASDPHLSE 195 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 +VR F+P+ +L G DGL R I RHL +G +E GY+Q V + +R Sbjct: 196 GDVR-FEPKSALVAGSDGLDDIRQIVAQAPRHLLDEGWLLLEHGYDQGAAVRELLGARGF 254 Query: 245 FLVNAFKDYGGNDRVLL 261 V+ +D GGN+R+ L Sbjct: 255 AGVHTLRDLGGNERITL 271 >gi|52842547|ref|YP_096346.1| protein methyltransferase HemK [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|52629658|gb|AAU28399.1| protein methyltransferase HemK [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 287 Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 83/251 (33%), Positives = 128/251 (50%), Gaps = 7/251 (2%) Query: 10 FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69 LC V + + PD+++ Q I + + I I G R+F+++ L ++ Sbjct: 29 LLCHVLNKNRAYLFAHPDALVSPEQIETYLQMIKQRAEGLPIAYITGQREFWSLSLKVTP 88 Query: 70 DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129 + PR ETE LV+ AL I ++ V +LDLGTG+GA+ LAL KE P + D Sbjct: 89 NVLIPRHETERLVELALEL----IPDKENVSVLDLGTGSGAIALALAKERPLWHIDACDF 144 Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVR 188 S +ALE+A+ NA T G++ + S WF+++ + IVSNPPYI +VR Sbjct: 145 SKEALELARYNAKTLGLN-NINFCHSYWFNNLPLKQYHAIVSNPPYIAENDPHLKHGDVR 203 Query: 189 DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN 248 F+P +L DGL+ + I +L DGL VE G+ QK ++ I ++ Sbjct: 204 -FEPTSALVSSQDGLADLQYIIQHSYEYLLPDGLLLVEHGFEQKNEISAILNQLGYKNIH 262 Query: 249 AFKDYGGNDRV 259 ++D G+DRV Sbjct: 263 CWQDLQGHDRV 273 >gi|15599859|ref|NP_253353.1| methyl transferase [Pseudomonas aeruginosa PAO1] gi|116052809|ref|YP_793126.1| putative methyl transferase [Pseudomonas aeruginosa UCBPP-PA14] gi|296391485|ref|ZP_06880960.1| putative methyl transferase [Pseudomonas aeruginosa PAb1] gi|9950919|gb|AAG08051.1|AE004880_7 probable methyl transferase [Pseudomonas aeruginosa PAO1] gi|115588030|gb|ABJ14045.1| putative methyl transferase [Pseudomonas aeruginosa UCBPP-PA14] Length = 276 Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 86/257 (33%), Positives = 130/257 (50%), Gaps = 8/257 (3%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L G + P+ ++ + I R E + ILG + F+++ L Sbjct: 22 DTELLLAAAMGKPRSFLRTWPERIVPREANERFDDWIARRRNGEPVAYILGHQGFWSLDL 81 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 ++ T PRP+TELLV++ALA D +LDLGTGTGA+ LAL E P + Sbjct: 82 EVAPHTLIPRPDTELLVETALATL-----AADTATVLDLGTGTGAIALALASERPLWTVT 136 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLG 184 VD +A+ +A+ N + E + +S WFS+++G F +IV NPPYI + Sbjct: 137 AVDRVEEAVALAERNR-QRLLLENVEVRRSHWFSALDGRRFRMIVGNPPYIPASDPHLSE 195 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 +VR F+P+ +L G DGL R I RHL +G +E GY+Q V + +R Sbjct: 196 GDVR-FEPKSALVAGSDGLDDIRQIVAQAPRHLLDEGWLLLEHGYDQGAAVRELLGARGF 254 Query: 245 FLVNAFKDYGGNDRVLL 261 V+ +D GGN+R+ L Sbjct: 255 AGVHTLRDLGGNERITL 271 >gi|293365353|ref|ZP_06612070.1| protein-(glutamine-N5) methyltransferase [Streptococcus oralis ATCC 35037] gi|307703895|ref|ZP_07640836.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptococcus oralis ATCC 35037] gi|291316803|gb|EFE57239.1| protein-(glutamine-N5) methyltransferase [Streptococcus oralis ATCC 35037] gi|307622730|gb|EFO01726.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptococcus oralis ATCC 35037] Length = 278 Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 77/228 (33%), Positives = 119/228 (52%), Gaps = 12/228 (5%) Query: 37 FLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR 96 F+ + + H+ I+G +F+ ++L + PRPETE LV+ L + Sbjct: 54 FVEEIYQQLVAHKPAQYIIGHAEFFGMQLKVDERVLIPRPETEELVELILTEN-----PE 108 Query: 97 DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 + +++LD+GTG+GA+ LAL K P + DIS +AL++A NA ++ F +SD Sbjct: 109 ENLKVLDIGTGSGAIALALAKNRPDWSVTAADISQEALQLASENAKNQNLNIFFK--KSD 166 Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216 F+ + +D+IVSNPPYI +GL V +P ++L DGL+ YR IA+ + Sbjct: 167 CFAEISEKYDIIVSNPPYISREDESEVGLNVLHSEPHLALFADEDGLAIYRRIAEDAKDY 226 Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRKLF---LVNAFKDYGGNDRVLL 261 L G +EIGY Q V +F RK V KD G DR+++ Sbjct: 227 LTDGGKIYLEIGYKQGQSVPALF--RKYLPEKRVRTLKDQFGQDRMVV 272 >gi|125717978|ref|YP_001035111.1| HemK protein [Streptococcus sanguinis SK36] gi|125497895|gb|ABN44561.1| HemK protein, putative [Streptococcus sanguinis SK36] gi|324991175|gb|EGC23109.1| protein-(glutamine-N5) methyltransferase [Streptococcus sanguinis SK353] Length = 276 Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 76/216 (35%), Positives = 113/216 (52%), Gaps = 8/216 (3%) Query: 46 LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLG 105 L H+ I+G DF+ + L + PRPETE LV+ L+ + + +LD+G Sbjct: 63 LVHKPAQYIIGSSDFHGLTLKVDERVLIPRPETEELVELILSEN-----PESSLSVLDIG 117 Query: 106 TGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF 165 TG+GA+ LAL P ++ D+S AL +A NA + ++ F +QSD S++G F Sbjct: 118 TGSGAIALALANSRPNWQITASDLSDDALALAAENAQSCELNLAF--VQSDCLDSIQGKF 175 Query: 166 DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225 D+IVSNPPYI D +GL V +P ++L DG + YR IA+ +L K G + Sbjct: 176 DIIVSNPPYISEADKDEVGLNVLTSEPHMALFAEEDGYAVYRKIAEQAGDYLTKKGKIYL 235 Query: 226 EIGYNQKVDVVRIFESR-KLFLVNAFKDYGGNDRVL 260 EIGY Q + + E + KD G DR++ Sbjct: 236 EIGYKQGDGIRELLEKNFPQKRIRVLKDQFGKDRMV 271 >gi|193064883|ref|ZP_03045960.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli E22] gi|194425825|ref|ZP_03058381.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli B171] gi|260843504|ref|YP_003221282.1| N5-glutamine methyltransferase [Escherichia coli O103:H2 str. 12009] gi|192927568|gb|EDV82185.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli E22] gi|194415880|gb|EDX32146.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli B171] gi|257758651|dbj|BAI30148.1| N5-glutamine methyltransferase [Escherichia coli O103:H2 str. 12009] gi|323162263|gb|EFZ48121.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli E128010] Length = 277 Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 92/258 (35%), Positives = 129/258 (50%), Gaps = 8/258 (3%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 RD+ L VTG ++ ++ L D Q L + R E I + G R+F+++ Sbjct: 22 RDAEILLEHVTGRGRTFILAFGETHLTDEQCQQLDALLTRRRDGEPIAHLTGVREFWSLP 81 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L +S T PRP+TE LV+ ALA LP RILDLGTGTGA+ LAL E P + Sbjct: 82 LFVSPATLIPRPDTECLVEQALA-RLP----EQPCRILDLGTGTGAIALALASERPDCEI 136 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183 + VD A+ +A+ NA + + LQSDWFS++ G F +IVSNPPYI+ Sbjct: 137 IAVDRMPDAVSLAQRNAQHLAI-KNIHILQSDWFSALAGQQFAMIVSNPPYIDEQDPHLQ 195 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 +VR F+P +L G++ I + L G +E G+ Q V + F Sbjct: 196 QGDVR-FEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFILAG 254 Query: 244 LFLVNAFKDYGGNDRVLL 261 V +DYG N+RV L Sbjct: 255 YHDVETCRDYGDNERVTL 272 >gi|323702618|ref|ZP_08114280.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Desulfotomaculum nigrificans DSM 574] gi|323532437|gb|EGB22314.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Desulfotomaculum nigrificans DSM 574] Length = 285 Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 76/230 (33%), Positives = 116/230 (50%), Gaps = 6/230 (2%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 DS L +TGL +I D L Q + R E + + G ++F + Sbjct: 25 DSQVLLSHITGLDRTGLITRGDQPLTPAQLQQYEKLLERRAGGEPVAYLTGHKEFMGLDF 84 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 +S PRP+TEL+V+ A+ SL R + +D+GTG+GA+ + L P + Sbjct: 85 IVSPAVLIPRPDTELMVERAV--SLLRQSGARPLPAVDVGTGSGAIAVTLAHLVPGLQVY 142 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV----EGLFDVIVSNPPYIESVIVD 181 +DIS AL +A+ NA +GV++R Q + + +G VI +N PYI S + Sbjct: 143 AIDISPDALAVARQNAARHGVADRVKFCQGNLLEPIPADLQGKVSVITANLPYIPSGDIS 202 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231 L +V+DF+PR++LDGG DGL+ YR + R L+ G +EIG Q Sbjct: 203 GLMTDVKDFEPRLALDGGPDGLALYRKLIPRAHRLLHPGGHLLMEIGPGQ 252 >gi|251799801|ref|YP_003014532.1| modification methylase, HemK family [Paenibacillus sp. JDR-2] gi|247547427|gb|ACT04446.1| modification methylase, HemK family [Paenibacillus sp. JDR-2] Length = 283 Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 83/280 (29%), Positives = 133/280 (47%), Gaps = 16/280 (5%) Query: 1 MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60 M+ ++ L V G+ ++ D I R E + I+G F Sbjct: 1 MEPRSNAERLLLHVLGIDRSTMLRDFGEPFPAAHAAEWVELIRRKAAGEPVQYIIGEEWF 60 Query: 61 YNVRLTLSSDTFEPRPETELLVDSAL--AFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118 Y T++ T PRPETELLV++ L A L + +V ++D+GTGTGA+ + L + Sbjct: 61 YGRPFTVTPATLIPRPETELLVEAVLEAADKLWPPDGAEVPTVVDVGTGTGAIGVTLASQ 120 Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS------------VEGL-F 165 P ++ D+S AL +A++NA + + R +Q D + E + Sbjct: 121 RPRWRVSASDLSPDALAVARTNAARHEAAGRMAFVQGDLLAPFAKRGAAGAALDAEDIRI 180 Query: 166 DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225 DV+VSNPPYI + + L EVRD++PR++LDGG DGL YR + + + + Sbjct: 181 DVLVSNPPYIPADDLPGLQPEVRDYEPRLALDGGADGLDPYRRMVGQLPSLAQLPRIVAF 240 Query: 226 EIGYNQKVDVVRIFESRKLF-LVNAFKDYGGNDRVLLFCR 264 E+G Q DV + + + + DYGG +R ++ R Sbjct: 241 ELGMGQARDVAALLRNVGEWDDIRIITDYGGIERHVIAVR 280 >gi|297183692|gb|ADI19817.1| methylase of polypeptide chain release factors [uncultured alpha proteobacterium EB000_37G09] Length = 295 Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 83/226 (36%), Positives = 123/226 (54%), Gaps = 7/226 (3%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101 + R +K E + R+ G R+F++ L+ T +PR +TE LV +A AF+ + + +I Sbjct: 69 MARRMKGEPVSRLRGKREFWSHDFYLNEATLDPRADTECLVAAACAFAALKPQGARPAQI 128 Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 LDLGTG+G + L+LL E P KGVG DI+ A+ A++NA GV+ R Q+ W + Sbjct: 129 LDLGTGSGCILLSLLLEQPDAKGVGTDIAALAIAQARANAAMLGVALRAAFHQTSWCDPI 188 Query: 162 -----EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216 GLFD+I SNPPYI S + L +V D+DP +L G DGL YRT+ + Sbjct: 189 AGVFMPGLFDIITSNPPYIGSQAL--LSADVADYDPHHALFAGADGLDDYRTLLPRLPAL 246 Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262 +++ +EIG QK V + L + D+ G DR L+ Sbjct: 247 MHRHARAFIEIGSTQKDAVSALAIESGLTVCGIELDFSGRDRCLIL 292 >gi|261393389|emb|CAX51025.1| putative protein methyltransferase HemK (protein-glutamine N-methyltransferase HemK; protein-(glutamine-N5) MTase HemK; M.StyLTHemKP) [Neisseria meningitidis 8013] Length = 423 Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 85/221 (38%), Positives = 113/221 (51%), Gaps = 12/221 (5%) Query: 44 RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103 R L E + ILG R+FY R T++ PRPETE LV++ LA LP + R+ D Sbjct: 204 RRLNGEPVAYILGVREFYGRRFTVNPSVLIPRPETEHLVEAVLA-RLP-----ENGRVWD 257 Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS--- 160 LGTG+GAV + + E P DIS ALE A+ NA G R + WF + Sbjct: 258 LGTGSGAVAVTVALERPDAFVRTSDISTPALETARKNAADLGA--RVEFAHGSWFDTDMP 315 Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220 EG +D+I SNPPYIE+ L ++R F+P+I+L DGLS RT+A G L + Sbjct: 316 SEGKWDIIASNPPYIENGDKHLLQGDLR-FEPQIALTDFSDGLSCIRTLAQGAPDRLAEG 374 Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 G +E G++Q V + V D G DRV L Sbjct: 375 GFLLLEHGFDQGAAVRGVLAENGFSGVETLPDLAGLDRVTL 415 >gi|328946333|gb|EGG40477.1| protein-(glutamine-N5) methyltransferase [Streptococcus sanguinis SK1087] Length = 276 Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 78/218 (35%), Positives = 114/218 (52%), Gaps = 12/218 (5%) Query: 46 LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLG 105 L H I G DF + L + PRPETE LV+ L+ + + +LD+G Sbjct: 63 LAHRPAQYINGRSDFLGLSLKVDERVLIPRPETEELVELILSEN-----PESSLSVLDIG 117 Query: 106 TGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF 165 TG+GA+ LAL ++ D+S AL +A+ NA + G++ F +QSD ++ G F Sbjct: 118 TGSGAIALALANSRSDWQITASDLSGDALALAEENAQSCGLNLAF--VQSDCLDAISGKF 175 Query: 166 DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225 D+IVSNPPYI D +GL V +P ++L DG + YR IA+ +L + G + Sbjct: 176 DIIVSNPPYISEADKDEVGLNVLTSEPHMALFAEEDGYAVYRKIAEQAGDYLTEKGKIYL 235 Query: 226 EIGYNQKVDVVRIFESRKLF---LVNAFKDYGGNDRVL 260 EIGY Q DV R+ +K F + KD G DR++ Sbjct: 236 EIGYKQGNDVARLL--KKSFPQKRIRVLKDQFGKDRMV 271 >gi|15642177|ref|NP_231809.1| hemK protein [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121586800|ref|ZP_01676582.1| hemK protein [Vibrio cholerae 2740-80] gi|153818816|ref|ZP_01971483.1| hemK protein [Vibrio cholerae NCTC 8457] gi|153823574|ref|ZP_01976241.1| hemK protein [Vibrio cholerae B33] gi|227082303|ref|YP_002810854.1| hemK protein [Vibrio cholerae M66-2] gi|229507744|ref|ZP_04397249.1| methylase of polypeptide chain release factors [Vibrio cholerae BX 330286] gi|229512020|ref|ZP_04401499.1| methylase of polypeptide chain release factors [Vibrio cholerae B33] gi|229607289|ref|YP_002877937.1| methylase of polypeptide chain release factor [Vibrio cholerae MJ-1236] gi|254849257|ref|ZP_05238607.1| hemK protein [Vibrio cholerae MO10] gi|255745093|ref|ZP_05419042.1| methylase of polypeptide chain release factors [Vibrio cholera CIRS 101] gi|298497807|ref|ZP_07007614.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Vibrio cholerae MAK 757] gi|18203196|sp|Q9KQ26|HEMK_VIBCH RecName: Full=Protein methyltransferase hemK homolog; AltName: Full=M.VchAHemK2P gi|9656732|gb|AAF95323.1| hemK protein [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121548967|gb|EAX59006.1| hemK protein [Vibrio cholerae 2740-80] gi|126510659|gb|EAZ73253.1| hemK protein [Vibrio cholerae NCTC 8457] gi|126518909|gb|EAZ76132.1| hemK protein [Vibrio cholerae B33] gi|227010191|gb|ACP06403.1| hemK protein [Vibrio cholerae M66-2] gi|229351985|gb|EEO16926.1| methylase of polypeptide chain release factors [Vibrio cholerae B33] gi|229355249|gb|EEO20170.1| methylase of polypeptide chain release factors [Vibrio cholerae BX 330286] gi|229369944|gb|ACQ60367.1| methylase of polypeptide chain release factor [Vibrio cholerae MJ-1236] gi|254844962|gb|EET23376.1| hemK protein [Vibrio cholerae MO10] gi|255736923|gb|EET92319.1| methylase of polypeptide chain release factors [Vibrio cholera CIRS 101] gi|297542140|gb|EFH78190.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Vibrio cholerae MAK 757] Length = 286 Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 88/260 (33%), Positives = 127/260 (48%), Gaps = 13/260 (5%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ LC V ++ PD +L+ L + R E + ILG R+F+++ L Sbjct: 27 DAAVLLCHVLAKPRSYLLTWPDKILEKPTLASLELLLARRRAGEPMAYILGEREFWSLPL 86 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV--RILDLGTGTGAVCLALLKESPFFK 123 +S T PRP+TE LV+ AL +K ++ +LDLGTGTGA+ LAL E P + Sbjct: 87 KVSPSTLIPRPDTERLVELAL-------DKAALIDGELLDLGTGTGAIALALASELPTRQ 139 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIESVIVD 181 G+D+ +A E+A+ NA + Q WFS + F +IVSNPPYIE Sbjct: 140 VTGIDLRPEAAELARENATRLAI-HNAQFFQGSWFSPLADGTKFALIVSNPPYIEENDPH 198 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P+ +L +GL+ R I+ L G E GY+Q V V I Sbjct: 199 LSLGDVR-FEPKSALVAAENGLADIRHISTHAPHFLLDGGWLLFEHGYDQGVAVRTILRD 257 Query: 242 RKLFLVNAFKDYGGNDRVLL 261 + +DY G+DRV L Sbjct: 258 LGYQNIITEQDYAGHDRVTL 277 >gi|149006295|ref|ZP_01830007.1| serine hydroxymethyltransferase [Streptococcus pneumoniae SP18-BS74] gi|307127430|ref|YP_003879461.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptococcus pneumoniae 670-6B] gi|147762072|gb|EDK69034.1| serine hydroxymethyltransferase [Streptococcus pneumoniae SP18-BS74] gi|306484492|gb|ADM91361.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptococcus pneumoniae 670-6B] Length = 279 Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 80/237 (33%), Positives = 120/237 (50%), Gaps = 12/237 (5%) Query: 28 SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALA 87 V + ++ F+ + + H+ I+G DFY + L + PRPETE LV+ L Sbjct: 46 EVTTEEEKQFVEDIYQQLAAHKPAQYIIGQADFYGMHLKVDERVLIPRPETEELVELILT 105 Query: 88 FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147 +L + +LD+GTG+GA+ LAL K P + D+S +ALE+A NA ++ Sbjct: 106 ENL-----ETNLSVLDIGTGSGAIALALAKNRPDWSVTAADVSQEALELASENASDQNLN 160 Query: 148 ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207 F +SD F+ + +D+IVSNPPYI +GL V +P ++L DGL+ Y Sbjct: 161 IFFK--KSDCFAEISEKYDIIVSNPPYISREDESEVGLNVLHSEPHLALFADEDGLAIYC 218 Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF---LVNAFKDYGGNDRVLL 261 IA+ +L G +EIGY Q V +F RK V KD G DR+++ Sbjct: 219 RIAEDAKDYLKDGGKIYLEIGYKQGQSVPELF--RKHLPEKKVRTLKDQFGQDRMVV 273 >gi|332075635|gb|EGI86103.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptococcus pneumoniae GA17545] Length = 279 Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 79/237 (33%), Positives = 119/237 (50%), Gaps = 12/237 (5%) Query: 28 SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALA 87 V + ++ F+ + + H+ I+G DFY ++L + PRPETE LV+ LA Sbjct: 46 EVTTEEEKQFVEDIYQQLAAHKPAQYIIGQEDFYGMQLKVDERVLIPRPETEELVELILA 105 Query: 88 FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147 + + +LD+GTG+GA+ LAL K P + DIS AL++A NA + Sbjct: 106 EN-----SETNLSVLDIGTGSGAIALALAKNRPDWSVTAADISQDALDVANENAKNQNL- 159 Query: 148 ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207 + +SD F+ + +D+IVSNPPYI +GL V +P ++L DGL+ YR Sbjct: 160 -QIFLKKSDCFTEISEKYDIIVSNPPYISREDESEVGLNVLHSEPHLALFADEDGLAIYR 218 Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL---VNAFKDYGGNDRVLL 261 I + +L G +EIGY Q V +F RK V KD G DR+++ Sbjct: 219 RIVEDAKDYLKDGGKIYLEIGYKQGQSVPELF--RKHLPEKHVRTLKDQFGQDRMVV 273 >gi|325205014|gb|ADZ00468.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Neisseria meningitidis M01-240355] Length = 273 Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 85/221 (38%), Positives = 113/221 (51%), Gaps = 12/221 (5%) Query: 44 RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103 R L E + ILG R+FY R T++ PRPETE LV++ LA LP + R+ D Sbjct: 54 RRLNGEPVAYILGVREFYGRRFTVNPSVLIPRPETEHLVEAVLA-RLP-----ENGRVWD 107 Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS--- 160 LGTG+GAV + + E P DIS ALE A+ NA G R + WF + Sbjct: 108 LGTGSGAVAVTVALERPDAFVRASDISPPALETARKNAADLGA--RVEFAHGSWFDTDMP 165 Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220 EG +D+IVSNPPYIE+ ++R F+P+I+L DGLS RT+A G L + Sbjct: 166 SEGKWDIIVSNPPYIENGDKHLSQGDLR-FEPQIALTDFSDGLSCIRTLAQGAPDRLAEG 224 Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 G +E G++Q V + V D G DRV L Sbjct: 225 GFLLLEHGFDQGAAVRGVLAENGFSGVETLPDLAGLDRVTL 265 >gi|289548685|ref|YP_003473673.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Thermocrinis albus DSM 14484] gi|289182302|gb|ADC89546.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Thermocrinis albus DSM 14484] Length = 270 Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 80/260 (30%), Positives = 131/260 (50%), Gaps = 11/260 (4%) Query: 5 RDSHSFLCRVTGLSSHQVIV--DPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 R+ H L + ++ + + D + ++ +R+ + + R + + +LG +FY Sbjct: 16 REKHLLLAHILQVTPSDLYLMEDYEVPFNEVERYI--SMLSRLEEGYPLQYLLGEWEFYG 73 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + PRPETELLV+ L + K ++ ++G GTG + + LL E P Sbjct: 74 RTFKVEEGVLIPRPETELLVEKILT----TVNKDRPLKGFEIGVGTGCISVTLLLEIPSL 129 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181 D++ KAL++A NA + V +R ++ F V G+ F ++VSNPPYI + D Sbjct: 130 VMYADDVNPKALQLAYQNACMHQVQDRLYLMEGSLFEPVRGMRFHLVVSNPPYIPEGMWD 189 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 L V+ ++ + SL GG G Y IA + L +DG+ +EIG++Q V IFE Sbjct: 190 SLPTTVK-WEGKTSLIGGPKGYEFYEKIASEIHHFLEEDGMFFLEIGHDQGSVVRDIFEE 248 Query: 242 RKLFLVNAFKDYGGNDRVLL 261 + F V FKD G DRV++ Sbjct: 249 KG-FRVEVFKDLAGQDRVVV 267 >gi|124515208|gb|EAY56719.1| Modification methylase (HemK) [Leptospirillum rubarum] Length = 293 Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 86/241 (35%), Positives = 123/241 (51%), Gaps = 15/241 (6%) Query: 29 VLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAF 88 VL D + + R + E H I G F R ++ T PRPETE LV++ L Sbjct: 58 VLPDELSACYASWVERRRQREPFHLITGSVPFLEERFAVAPGTLIPRPETESLVENVLRI 117 Query: 89 SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148 ++ R RILDLG G+G + ++LLK+ P + VD S LE+++ NA+ GV Sbjct: 118 ----LDSRSPERILDLGCGSGILGISLLKKFPKAHCLAVDRSVVPLEVSRKNALALGVLS 173 Query: 149 RFDTLQSDWFS--SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206 R +Q DW ++ FD+IVSNPPYI S + L E+ ++PR +LDGG DGL Y Sbjct: 174 RIHFVQGDWTEMLRLDQGFDLIVSNPPYIASGDLSGLDPEILFYEPREALDGGPDGLVFY 233 Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA-----FKDYGGNDRVLL 261 R + + L+ G+ +VEIG Q F S F+ F D G DR++L Sbjct: 234 RRLMAVLPGLLSTGGVAAVEIGSCQG----DFFRSDAGFVSGCGAPLVFPDILGLDRIVL 289 Query: 262 F 262 + Sbjct: 290 W 290 >gi|71909296|ref|YP_286883.1| modification methylase HemK [Dechloromonas aromatica RCB] gi|71848917|gb|AAZ48413.1| [protein release factor]-glutamine N5-methyltransferase [Dechloromonas aromatica RCB] Length = 270 Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 87/255 (34%), Positives = 123/255 (48%), Gaps = 8/255 (3%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L TG S ++ P+ + + + R E + ++G +F Sbjct: 18 DARLLLQYATGCSHADLLARPEMPVIGPAYEQFQDWVARRAAGEPLAYLVGEAEFRGRVF 77 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 +S PRPETE+L++ ALA LP + VV DLGTG+G V ++L ESP V Sbjct: 78 QVSPAVLIPRPETEVLIELALA-KLPGLAAPKVV---DLGTGSGIVAISLALESPAATVV 133 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLG 184 VD+S +A+ +A++NA G R D Q DWFS + G FD+IVSNPPY+ L Sbjct: 134 AVDLSAEAISVARNNAGRLGA--RIDFRQGDWFSPLAGERFDLIVSNPPYVADGDPH-LA 190 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 L F+P+++L G DGLS R I + HL G E GY+Q + + Sbjct: 191 LNGLPFEPQMALTDGADGLSCIRHIVADAADHLAPGGWLLFEHGYDQGEASRNLLTAAGF 250 Query: 245 FLVNAFKDYGGNDRV 259 F D G DRV Sbjct: 251 KAAFTFPDLAGIDRV 265 >gi|146306095|ref|YP_001186560.1| HemK family modification methylase [Pseudomonas mendocina ymp] gi|145574296|gb|ABP83828.1| [protein release factor]-glutamine N5-methyltransferase [Pseudomonas mendocina ymp] Length = 294 Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 80/237 (33%), Positives = 128/237 (54%), Gaps = 8/237 (3%) Query: 26 PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85 P+ LD++Q+ ++R + E + ILG + F+++ L ++ T PRP+TELLV++A Sbjct: 59 PERELDEQQQALFQANLMRRRQGEPVAYILGHQGFWSLELEVAPHTLIPRPDTELLVETA 118 Query: 86 LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145 L LP + +LDLGTGTGA+ LAL E P ++ GVD A+ +A+ N Sbjct: 119 LEL-LPATP----LTVLDLGTGTGAIALALASERPAWRVTGVDRVEDAVALAERNRQRLQ 173 Query: 146 VSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204 + + + S WFS++ G + +I+SNPPYI + +VR F+P +L G DGL Sbjct: 174 L-DNAAFVHSHWFSALSGQRYGLILSNPPYIRADDRHLNEGDVR-FEPSSALVAGSDGLD 231 Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 R I HL G +E G++Q V + + V++ +D GG++R+ L Sbjct: 232 DIRAIIQAAPAHLLAGGWLLLEHGFDQAEAVRGLLAAAGFAEVHSRRDLGGHERISL 288 >gi|224368816|ref|YP_002602977.1| HemK [Desulfobacterium autotrophicum HRM2] gi|223691532|gb|ACN14815.1| HemK [Desulfobacterium autotrophicum HRM2] Length = 295 Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 79/224 (35%), Positives = 113/224 (50%), Gaps = 9/224 (4%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV-- 99 I R E + I G + F+ T++ PRP+TE+LV+ AL F + ++++ Sbjct: 68 IERRGDREPVAYITGTKGFWESEFTVAPGVLIPRPDTEVLVEQALEF----LARKNISMG 123 Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+L+LG G+GAV +++ K +P DIS LE+A N + WFS Sbjct: 124 RVLELGVGSGAVIISIAKANPGLYCFATDISLIPLEVAAFNVKQELELPNLSFVAGSWFS 183 Query: 160 SVEG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217 G FD+IVSNPPYI + + L EV F+P ++LDGG DGL R I HL Sbjct: 184 PFNGRAKFDLIVSNPPYIPTGDIQGLQPEVSRFEPSLALDGGEDGLDCIRLIMAKACDHL 243 Query: 218 NKDGLCSVEIGYNQKVDVVRIFESRKLF-LVNAFKDYGGNDRVL 260 G+ +E G Q+ V +IF+ F V F DY G RV+ Sbjct: 244 VPGGVLLMETGSGQRRGVEKIFKECPGFSTVEFFNDYAGLHRVV 287 >gi|74312448|ref|YP_310867.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Shigella sonnei Ss046] gi|191166624|ref|ZP_03028452.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli B7A] gi|218694726|ref|YP_002402393.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli 55989] gi|300821018|ref|ZP_07101167.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS 119-7] gi|307310033|ref|ZP_07589683.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli W] gi|309794303|ref|ZP_07688727.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS 145-7] gi|331676992|ref|ZP_08377688.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli H591] gi|73855925|gb|AAZ88632.1| possible protoporphyrinogen oxidase [Shigella sonnei Ss046] gi|190903273|gb|EDV62994.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli B7A] gi|218351458|emb|CAU97166.1| N5-glutamine methyltransferase, modifies release factors RF-1 and RF-2 [Escherichia coli 55989] gi|300526317|gb|EFK47386.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS 119-7] gi|306909751|gb|EFN40245.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli W] gi|308122208|gb|EFO59470.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS 145-7] gi|315060463|gb|ADT74790.1| N5-glutamine methyltransferase, modifies release factors RF-1 and RF-2 [Escherichia coli W] gi|320199251|gb|EFW73842.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli EC4100B] gi|323168382|gb|EFZ54063.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Shigella sonnei 53G] gi|323172434|gb|EFZ58071.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli LT-68] gi|323185626|gb|EFZ70987.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli 1357] gi|323378973|gb|ADX51241.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli KO11] gi|331075681|gb|EGI46979.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli H591] Length = 277 Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 92/258 (35%), Positives = 129/258 (50%), Gaps = 8/258 (3%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 RD+ L VTG ++ ++ L D Q L + R E I + G R+F+++ Sbjct: 22 RDAEILLEYVTGRGRTFILAFGETQLTDEQCQQLDALLTRRRDGEPIAHLTGVREFWSLP 81 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L +S T PRP+TE LV+ ALA LP RILDLGTGTGA+ LAL E P + Sbjct: 82 LFVSPATLIPRPDTECLVEQALA-RLP----EQPCRILDLGTGTGAIALALASERPDCEI 136 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183 + VD A+ +A+ NA + + LQSDWFS++ G F +IVSNPPYI+ Sbjct: 137 IAVDRMPDAVSLAQRNAQHLAI-KNIHILQSDWFSALAGQQFAMIVSNPPYIDEQDPHLQ 195 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 +VR F+P +L G++ I + L G +E G+ Q V + F Sbjct: 196 QGDVR-FEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFILAG 254 Query: 244 LFLVNAFKDYGGNDRVLL 261 V +DYG N+RV L Sbjct: 255 YHDVETCRDYGDNERVTL 272 >gi|168576250|ref|ZP_02722144.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptococcus pneumoniae MLV-016] gi|183577963|gb|EDT98491.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptococcus pneumoniae MLV-016] Length = 279 Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 79/237 (33%), Positives = 119/237 (50%), Gaps = 12/237 (5%) Query: 28 SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALA 87 V + ++ F+ + + H+ I+G DFY + L + PRPETE LV+ L Sbjct: 46 EVTTEEEKQFVEDIYQQLAAHKPAQYIIGQADFYGMHLKVDERVLIPRPETEELVELILT 105 Query: 88 FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147 +L + +LD+GTG+G + LAL K P + D+S +AL++A NA + Sbjct: 106 ENL-----ETNLSVLDIGTGSGTIALALAKNRPDWSVTAADVSQEALDLASENAKNQNLQ 160 Query: 148 ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207 F +SD F+ + +D+IVSNPPYI +GL V +P ++L DGL+ YR Sbjct: 161 IFFK--KSDCFTEISEKYDIIVSNPPYISREDESEVGLNVLYSEPHLALFADEDGLAIYR 218 Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF---LVNAFKDYGGNDRVLL 261 IA+ +L G +EIGY Q V +F RK V KD G DR+++ Sbjct: 219 RIAEDAKDYLKDGGKIYLEIGYKQGQSVPELF--RKHLPEKKVRTLKDQFGQDRMVV 273 >gi|313893578|ref|ZP_07827147.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Veillonella sp. oral taxon 158 str. F0412] gi|313441849|gb|EFR60272.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Veillonella sp. oral taxon 158 str. F0412] Length = 289 Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 77/218 (35%), Positives = 120/218 (55%), Gaps = 9/218 (4%) Query: 47 KHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGT 106 K S+ I G +DF + ++ PRP+TE L++ L + +RILD+ T Sbjct: 71 KGYSVASITGQKDFMGLTFKVNDKVLIPRPDTESLIEHVL----DTYSEDCNIRILDICT 126 Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-- 164 G G + L+LL P GVG+DIS AL +A+ NA + +++R + +SD FS++ G Sbjct: 127 GPGTILLSLLHYLPNAVGVGLDISTDALPLARENADSFNLTKRVEFKESDMFSALRGTDE 186 Query: 165 -FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223 FD+IVSNPPYI + L +V + +P I+L GG DGL YR +A +L G Sbjct: 187 KFDLIVSNPPYIRTGDAKMLSQDVLN-EPHIALFGGEDGLVFYRILAKTCGAYLATSGRV 245 Query: 224 SVEIGYNQKVDVVRIFESRKLFL-VNAFKDYGGNDRVL 260 + E+GY+Q V ++ E+ + + D GG++RV+ Sbjct: 246 AFEVGYDQAEAVRKLLEATGQYSNIQFIADLGGHNRVV 283 >gi|330719388|ref|ZP_08313988.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Leuconostoc fallax KCTC 3537] Length = 292 Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 68/182 (37%), Positives = 99/182 (54%), Gaps = 3/182 (1%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110 + +LG FY + PRPETELLVD L +K ++ILD+GTG+GA Sbjct: 79 VQYVLGTAPFYGREFLVDERVLIPRPETELLVDWVLQDLKANSQKE--IKILDIGTGSGA 136 Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIV 169 + +L E +G+ DIS AL +A+ NA + +R +SD F+ + + FDVI+ Sbjct: 137 IVETILLEDQRVQGMAADISTDALTVAQHNAKKFKIRDRISFTESDVFAQIPAMKFDVIL 196 Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY 229 SNPPYI+ + + V DF+P I+L GL+ Y IA ++ +L DG+ EIGY Sbjct: 197 SNPPYIDPQDQNEMDQSVIDFEPDIALYAAHQGLAIYENIAQQLNNYLKDDGIAYFEIGY 256 Query: 230 NQ 231 Q Sbjct: 257 KQ 258 >gi|169633251|ref|YP_001706987.1| methyl transferase [Acinetobacter baumannii SDF] gi|169152043|emb|CAP00927.1| methyl transferase [Acinetobacter baumannii] Length = 273 Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 77/215 (35%), Positives = 113/215 (52%), Gaps = 12/215 (5%) Query: 49 ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108 E + + G + F+ + L ++SDT PRP+TE+LV++ L +LP+ I+DLGTGT Sbjct: 63 EPLAYVTGSQPFWTLDLKVTSDTLVPRPDTEVLVETVLNLNLPK-----NANIVDLGTGT 117 Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVE-GLFD 166 GA+ LAL E P + DI LE+AK NA T+G+ +F W+ ++E FD Sbjct: 118 GAIALALASERPDWFVTATDIYAPTLEVAKENAQTHGLHHVKFAC--GVWYEALEPQQFD 175 Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE 226 +IVSNPPYI+ + ++ +PR +L GL+ I L G ++E Sbjct: 176 LIVSNPPYIDP---EDEHMQALATEPRRALVADHHGLADIEIIIAQGKNWLKPQGWIALE 232 Query: 227 IGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 GY+Q V IF + +DYG NDRV L Sbjct: 233 HGYDQGQAVRGIFAEHGFSEIRTIQDYGRNDRVTL 267 >gi|110805217|ref|YP_688737.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Shigella flexneri 5 str. 8401] gi|110614765|gb|ABF03432.1| possible protoporphyrinogen oxidase [Shigella flexneri 5 str. 8401] Length = 277 Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 92/258 (35%), Positives = 128/258 (49%), Gaps = 8/258 (3%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 RD+ L VTG ++ ++ L D Q L + R E I + G R+F+++ Sbjct: 22 RDAEILLEHVTGRGRTFILAFGETQLTDEQCQQLDALLTRRRDGEPIAHLTGVREFWSLP 81 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L +S T PRP+TE LV+ ALA LP RILDLGTGTGA+ LAL E P + Sbjct: 82 LFVSPATLIPRPDTECLVEQALA-RLP----EQPCRILDLGTGTGAIALALASERPDCEI 136 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183 + VD A+ +A+ NA + + LQSDWFS++ G F +IVSNPPYI+ Sbjct: 137 IAVDRMPDAVSLAQRNAQHLAI-KNIHILQSDWFSALAGQQFAMIVSNPPYIDEQDPHLQ 195 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 +VR F+P +L G++ I L G +E G+ Q V + F Sbjct: 196 QGDVR-FEPLTALVAADSGMADIVHIIQQSRNALVSGGFLLLEHGWQQGEAVRQAFILAG 254 Query: 244 LFLVNAFKDYGGNDRVLL 261 V +DYG N+RV L Sbjct: 255 YHDVETCRDYGDNERVTL 272 >gi|172059500|ref|YP_001807152.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Burkholderia ambifaria MC40-6] gi|171992017|gb|ACB62936.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Burkholderia ambifaria MC40-6] Length = 280 Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 86/262 (32%), Positives = 130/262 (49%), Gaps = 15/262 (5%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDR--QRFFLTNAIVRSLKHESIHRILGWRDFYNV 63 D+ L G + Q+I D+ LD +R+ A R + E + +++G R+F+ Sbjct: 19 DARVLLAYALGWTRTQLITRGDAPLDPASIERYRALEA--RRVAGEPVAQLVGMREFFGR 76 Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 ++ D PRPETELLV++AL I+ R +LDLGTG+GA+ +++ E P + Sbjct: 77 PFDVTPDVLIPRPETELLVEAALDA----IDGRPHPAVLDLGTGSGAIAVSIAAERPDAR 132 Query: 124 GVGVDISCKALEIAKSNAVTNGVSER----FDTLQSDWFSSVEG--LFDVIVSNPPYIES 177 +D S AL++A+ NA + R LQSDW+++++ FD IVSNPPYI Sbjct: 133 VWALDRSPAALDVARRNADKLLDARRPGGPLHWLQSDWYAALDPALAFDTIVSNPPYIAQ 192 Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237 ++R F+PR +L DGLS RTI L G +E GY+Q V Sbjct: 193 HDPHLAQGDLR-FEPRGALTDDADGLSAIRTIVASAGAFLKPGGTLWIEHGYDQAEAVRA 251 Query: 238 IFESRKLFLVNAFKDYGGNDRV 259 + SR V + D +R Sbjct: 252 LLVSRGFVAVESLADLAAIERT 273 >gi|78065072|ref|YP_367841.1| modification methylase HemK [Burkholderia sp. 383] gi|77965817|gb|ABB07197.1| [protein release factor]-glutamine N5-methyltransferase [Burkholderia sp. 383] Length = 280 Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 85/262 (32%), Positives = 129/262 (49%), Gaps = 15/262 (5%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDR--QRFFLTNAIVRSLKHESIHRILGWRDFYNV 63 D+ L G + Q+I D+ LD +R+ A R L E + +++G R+F+ Sbjct: 19 DARVLLAHALGWTRTQLITRGDATLDAAAVERYRALEA--RRLAGEPVAQLVGMREFFGR 76 Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 ++ D PRPETELLV++AL I+ +LDLGTG+GA+ +++ E P + Sbjct: 77 PFDVTPDVLIPRPETELLVEAALDA----IDGLPHPAVLDLGTGSGAIAVSIAAERPDAR 132 Query: 124 GVGVDISCKALEIAKSNAVTNGVSER----FDTLQSDWFSSVEG--LFDVIVSNPPYIES 177 +D S AL +A+ NA + R L+SDW+++++ FD IVSNPPYI Sbjct: 133 VWALDRSPAALAVAQRNAGKLLDARRPGGPLHWLESDWYAALDPALAFDTIVSNPPYIAQ 192 Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237 ++R F+PR +L DGLS RTI G +L G +E GY+Q V Sbjct: 193 HDPHLAQGDLR-FEPRGALTDDADGLSAIRTIVAGAGTYLKPGGTLWIEHGYDQAEAVRA 251 Query: 238 IFESRKLFLVNAFKDYGGNDRV 259 + S V + D +R Sbjct: 252 VLASHGFVAVESLADLAAIERT 273 >gi|212636629|ref|YP_002313154.1| Modification methylase HemK [Shewanella piezotolerans WP3] gi|212558113|gb|ACJ30567.1| Modification methylase HemK [Shewanella piezotolerans WP3] Length = 280 Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 83/257 (32%), Positives = 130/257 (50%), Gaps = 8/257 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A+ D+ L + + P+ LD Q + + L+ I I+G R+F++ Sbjct: 23 AMLDAEVMLLHIINKPRSYLYTWPERDLDSAQVSEFKQMLAKRLRGNPIAHIVGEREFWS 82 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + ++ T PRP+TE+LV++AL +LP E R+LDLGTGTGA+ L+L E + Sbjct: 83 LPFRVNPTTLIPRPDTEILVETAL--NLPLAEN---ARVLDLGTGTGAIALSLAHERNEW 137 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181 + +D +A+ +A N V N E D QSDWF +VE F++IVSNPPYI+ Sbjct: 138 QVCAIDKVEEAVALAIENRV-NLKLEHVDVFQSDWFDAVECYDFNLIVSNPPYIDEEDEH 196 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P+ +L + G + IA+ +L G +E GY Q +++ Sbjct: 197 LSQGDVR-FEPQSALTAPLKGFADLFHIANCARDYLAPGGYLLLEHGYQQAIELREKLIE 255 Query: 242 RKLFLVNAFKDYGGNDR 258 V +D+G NDR Sbjct: 256 LGFENVATVRDFGSNDR 272 >gi|325127342|gb|EGC50277.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Neisseria meningitidis N1568] Length = 273 Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 85/221 (38%), Positives = 113/221 (51%), Gaps = 12/221 (5%) Query: 44 RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103 R L E + ILG R+FY R T++ PRPETE LV++ LA LP + R+ D Sbjct: 54 RRLNGEPVAYILGVREFYGRRFTVNPSVLIPRPETEHLVEAVLA-RLP-----ENGRVWD 107 Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS--- 160 LGTG+GAV + + E P DIS ALE A+ NA G R + WF + Sbjct: 108 LGTGSGAVAVTVALERPDAFVRTSDISTPALETARKNAADLGA--RVEFAHGSWFDTDMP 165 Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220 EG +D+IVSNPPYIE+ ++R F+P+I+L DGLS RT+A G L + Sbjct: 166 SEGKWDIIVSNPPYIENGDKHLSQGDLR-FEPQIALTDFSDGLSCIRTLAQGAPDRLAEG 224 Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 G +E G++Q V + V D G DRV L Sbjct: 225 GFLLLEHGFDQGAAVRGVLAENGFSGVETLPDLAGLDRVTL 265 >gi|291460254|ref|ZP_06599644.1| protein-(glutamine-N5) methyltransferase [Oribacterium sp. oral taxon 078 str. F0262] gi|291417201|gb|EFE90920.1| protein-(glutamine-N5) methyltransferase [Oribacterium sp. oral taxon 078 str. F0262] Length = 298 Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 84/245 (34%), Positives = 127/245 (51%), Gaps = 22/245 (8%) Query: 31 DDRQRFFLTNAIVRSLKHES----IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL 86 D+R+R T R L + + ++LG+ DF+ +R +S PR +TE+LV+ AL Sbjct: 55 DEREREERTADFRRLLSERASRIPLQQLLGYTDFFGLRFRVSEAVLSPRQDTEILVEEAL 114 Query: 87 AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA---VT 143 A S + LDL TG+G V ++LL F + D+S AL A+ NA + Sbjct: 115 AESTGK-------HALDLCTGSGCVGISLLYYGEFESMLLTDLSAPALRKAEENAERLLP 167 Query: 144 NGVSERFDTLQSDWFSSV------EGL--FDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195 R L+SD F + +G+ FD+I+SNPPYI ++ L EV + +PR++ Sbjct: 168 PEKRARLFLLRSDLFQRISEYEREKGIQGFDLILSNPPYIRRGEIESLEPEVSEHEPRMA 227 Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGG 255 LDGG DGL YR IA +HL G +EIG+++ +V + S ++ +D G Sbjct: 228 LDGGEDGLFFYREIAREAPKHLRPGGRICLEIGFDEAEEVSALLLSAGFSELSLRRDLSG 287 Query: 256 NDRVL 260 DRVL Sbjct: 288 KDRVL 292 >gi|300690279|ref|YP_003751274.1| N5-glutamine methyltransferase, modifies release factors RF-1 and RF-2 [Ralstonia solanacearum PSI07] gi|299077339|emb|CBJ49964.1| N5-glutamine methyltransferase, modifies release factors RF-1 and RF-2 [Ralstonia solanacearum PSI07] Length = 295 Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 89/260 (34%), Positives = 125/260 (48%), Gaps = 15/260 (5%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 ++ + VTGLS Q+I +DD R L R L E + +LG R+F+ Sbjct: 31 EARMLVSHVTGLSRVQLITQDTCSIDDGARARLAELATRRLAGEPMAYLLGEREFFGRMF 90 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG--AVCLALLKESPFFK 123 ++ PRP+TELLV+ AL RI+ RD +LDLGTG+G AV +AL + + Sbjct: 91 RVTPAVLIPRPDTELLVEQALD----RIDDRDAPDVLDLGTGSGIIAVTIALARRD--AR 144 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-----EGLFDVIVSNPPYIESV 178 D S AL +A NA G + L DW++++ +FD+I SNPPYI S Sbjct: 145 VWATDTSADALTVAVRNAQALGAANVHVAL-GDWYAALPENDAPPVFDLIASNPPYIAST 203 Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238 ++R F+P +L DGL H RTI G L DG +E GY+Q V + Sbjct: 204 DTHLDQGDLR-FEPAGALTDHGDGLRHLRTIVTGAPARLAADGWLLLEHGYDQGPAVRAL 262 Query: 239 FESRKLFLVNAFKDYGGNDR 258 V +D G+DR Sbjct: 263 LAEAGFADVFTAQDLAGHDR 282 >gi|82776552|ref|YP_402901.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Shigella dysenteriae Sd197] gi|309789160|ref|ZP_07683753.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Shigella dysenteriae 1617] gi|81240700|gb|ABB61410.1| possible protoporphyrinogen oxidase [Shigella dysenteriae Sd197] gi|308922914|gb|EFP68428.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Shigella dysenteriae 1617] Length = 277 Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 92/258 (35%), Positives = 128/258 (49%), Gaps = 8/258 (3%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 RD+ L VTG ++ ++ L D Q L + R E I + G R+F+++ Sbjct: 22 RDAEILLEHVTGKGRTFILAFGETQLTDEQCQQLDALLTRRRDGEPIAHLTGVREFWSLP 81 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L +S T PRP+TE LV+ ALA LP RILDLGTGTGA+ LAL +E P + Sbjct: 82 LFVSPATLIPRPDTECLVEQALA-RLP----EQPCRILDLGTGTGAIALALARERPDCEI 136 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183 VD A+ +A+ NA + + LQSDWFS + G F +IVSNPPYI+ Sbjct: 137 TAVDRMPDAVALAQRNAQHLAI-KNIHILQSDWFSELAGQQFAMIVSNPPYIDEQDPHLQ 195 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 +VR F+P +L G++ I + L G +E G+ Q V + F Sbjct: 196 QGDVR-FEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFILAG 254 Query: 244 LFLVNAFKDYGGNDRVLL 261 V +DYG N+RV L Sbjct: 255 YHDVETCRDYGDNERVTL 272 >gi|15900892|ref|NP_345496.1| HemK protein [Streptococcus pneumoniae TIGR4] gi|111658250|ref|ZP_01408942.1| hypothetical protein SpneT_02000564 [Streptococcus pneumoniae TIGR4] gi|14972494|gb|AAK75136.1| HemK protein [Streptococcus pneumoniae TIGR4] Length = 279 Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 80/239 (33%), Positives = 120/239 (50%), Gaps = 16/239 (6%) Query: 28 SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALA 87 V + ++ F+ + + H+ I+G DFY + L + PRPETE LV+ LA Sbjct: 46 EVTTEEEKQFVEDIYQQLAAHKPAQYIIGQADFYGMHLKVDERVLIPRPETEELVELILA 105 Query: 88 FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147 + + + +LD+GTG+GA+ LAL K P + DIS AL++A NA + Sbjct: 106 ENPVK-----NLMVLDIGTGSGAIALALAKNRPDWSVTAADISQDALDVASENAKNQNL- 159 Query: 148 ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207 + +SD F+ + +D+IVSNPPYI +GL V +P ++L DGL+ YR Sbjct: 160 -QIFLKKSDCFTEISEKYDIIVSNPPYISREDESEVGLNVLYSEPHLALFADEDGLAIYR 218 Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF-----ESRKLFLVNAFKDYGGNDRVLL 261 IA+ +L G +EIGY Q V +F E R V KD G DR+++ Sbjct: 219 RIAEDAKDYLKDGGKIYLEIGYKQGQSVPELFRKHLPEKR----VRTLKDQFGQDRMVV 273 >gi|26247535|ref|NP_753575.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli CFT073] gi|91210433|ref|YP_540419.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli UTI89] gi|110641442|ref|YP_669172.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli 536] gi|117623430|ref|YP_852343.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli APEC O1] gi|191170952|ref|ZP_03032503.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli F11] gi|218558141|ref|YP_002391054.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli S88] gi|218689159|ref|YP_002397371.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli ED1a] gi|227886366|ref|ZP_04004171.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli 83972] gi|237705174|ref|ZP_04535655.1| methyltransferase HemK [Escherichia sp. 3_2_53FAA] gi|300971919|ref|ZP_07171707.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS 45-1] gi|300995965|ref|ZP_07181327.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS 200-1] gi|301046861|ref|ZP_07193978.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS 185-1] gi|331657263|ref|ZP_08358225.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli TA206] gi|26107936|gb|AAN80135.1|AE016759_409 Protein methyltransferase hemK [Escherichia coli CFT073] gi|91072007|gb|ABE06888.1| protein methyltransferase HemK [Escherichia coli UTI89] gi|110343034|gb|ABG69271.1| protein methyltransferase HemK [Escherichia coli 536] gi|115512554|gb|ABJ00629.1| protein methyltransferase HemK [Escherichia coli APEC O1] gi|190908684|gb|EDV68272.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli F11] gi|218364910|emb|CAR02606.1| N5-glutamine methyltransferase, modifies release factors RF-1 and RF-2 [Escherichia coli S88] gi|218426723|emb|CAR07560.1| N5-glutamine methyltransferase, modifies release factors RF-1 and RF-2 [Escherichia coli ED1a] gi|226899931|gb|EEH86190.1| methyltransferase HemK [Escherichia sp. 3_2_53FAA] gi|227836570|gb|EEJ47036.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli 83972] gi|294492037|gb|ADE90793.1| protein methyltransferase HemK [Escherichia coli IHE3034] gi|300301229|gb|EFJ57614.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS 185-1] gi|300304662|gb|EFJ59182.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS 200-1] gi|300411044|gb|EFJ94582.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS 45-1] gi|307553267|gb|ADN46042.1| protein methyltransferase HemK [Escherichia coli ABU 83972] gi|307627265|gb|ADN71569.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli UM146] gi|315288567|gb|EFU47965.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS 110-3] gi|315290790|gb|EFU50162.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS 153-1] gi|315297346|gb|EFU56626.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS 16-3] gi|323949671|gb|EGB45557.1| protein-(glutamine-N5) methyltransferase [Escherichia coli H252] gi|323953933|gb|EGB49732.1| protein-(glutamine-N5) methyltransferase [Escherichia coli H263] gi|324015638|gb|EGB84857.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS 60-1] gi|331055511|gb|EGI27520.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli TA206] Length = 277 Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 92/258 (35%), Positives = 128/258 (49%), Gaps = 8/258 (3%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 RD+ L VTG ++ ++ L D Q L + R E I + G R+F+++ Sbjct: 22 RDAEILLEHVTGRGRTFILAFGETQLTDEQCQQLDALLTRRRDGEPIAHLTGVREFWSLP 81 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L +S T PRP+TE LV+ ALA LP RILDLGTGTGA+ LAL E P + Sbjct: 82 LFVSPATLIPRPDTECLVEQALA-RLP----EQPCRILDLGTGTGAIALALASERPDCEI 136 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183 VD A+ +A+ NA + + LQSDWFS++ G F +IVSNPPYI+ Sbjct: 137 TAVDRMPDAVSLAQRNAQHLAI-KNIHILQSDWFSALAGQQFAMIVSNPPYIDEQDPHLQ 195 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 +VR F+P +L G++ I + L G +E G+ Q V + F Sbjct: 196 QGDVR-FEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFIFAG 254 Query: 244 LFLVNAFKDYGGNDRVLL 261 V +DYG N+RV L Sbjct: 255 YHDVETCRDYGDNERVTL 272 >gi|291617196|ref|YP_003519938.1| HemK [Pantoea ananatis LMG 20103] gi|291152226|gb|ADD76810.1| HemK [Pantoea ananatis LMG 20103] Length = 344 Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 82/253 (32%), Positives = 129/253 (50%), Gaps = 8/253 (3%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 RD+ L VTG S ++ +++L + Q L + R + E + ++G R+F+++ Sbjct: 23 RDAEILLGFVTGKSRSWLVAFDETLLTEAQLQQLDVLLARRARGEPVAHLIGEREFWSLP 82 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L ++ T PRP+TE+LV+ ALA LP R+LD+GTG+GA+ LA+ E P Sbjct: 83 LQVNDATLIPRPDTEILVEQALAH-LP----ESPARVLDMGTGSGAIALAIASERPDCDV 137 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCL 183 +GVD A+ +A+ NA + +QS WF+ + D+IVSNPPYI++ Sbjct: 138 IGVDRIPAAVALAQRNAAHLAIPN-ATFIQSHWFAQITPARLDLIVSNPPYIDANDRHLN 196 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 +VR F+PR +L GL+ R + + L G +E G+ Q V + + Sbjct: 197 EGDVR-FEPRSALVAEEAGLADLRLLIEQAINWLQPGGWLLLEHGWQQDEAVRHLMQQHH 255 Query: 244 LFLVNAFKDYGGN 256 V DYGGN Sbjct: 256 YLSVATANDYGGN 268 >gi|260888150|ref|ZP_05899413.1| protein-(glutamine-N5) methyltransferase [Selenomonas sputigena ATCC 35185] gi|330840017|ref|YP_004414597.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Selenomonas sputigena ATCC 35185] gi|260862179|gb|EEX76679.1| protein-(glutamine-N5) methyltransferase [Selenomonas sputigena ATCC 35185] gi|329747781|gb|AEC01138.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Selenomonas sputigena ATCC 35185] Length = 292 Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 83/263 (31%), Positives = 125/263 (47%), Gaps = 6/263 (2%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L V G + V D L+ + A+ + I G R+F + Sbjct: 31 DAEVLLSHVLGKERIYLYVHFDEPLEKEELAAFRKAVAERARRVPTAYITGRREFMGLDF 90 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEK--RDVVRILDLGTGTGAVCLALLK-ESPFF 122 +S T PRP+TE+LV++A+ L R+ + R +R D+GTGTGA+ L++LK S Sbjct: 91 AVSRATLIPRPDTEILVEAAIE-RLGRLAENGRKPLRFADIGTGTGAIALSVLKYASEDV 149 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVD 181 VDIS AL IA+ NA G+S + D + + +D I+SNPPYI + Sbjct: 150 AADAVDISGAALAIARENAERLGLSACVHFHEGDLLAPLSHAAYDAILSNPPYIPDADFE 209 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 L EVR ++P +L GG DG+ Y +A+ ++L G +VE G Q +R Sbjct: 210 RLAPEVRSYEPMTALKGGADGMDFYARLAEAAPQYLRAGGFLAVEAGIGQ-AQKIRALAK 268 Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264 V D G +RV++ R Sbjct: 269 EPWGDVEILPDLAGIERVVVLWR 291 >gi|326692969|ref|ZP_08229974.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Leuconostoc argentinum KCTC 3773] Length = 335 Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 79/221 (35%), Positives = 116/221 (52%), Gaps = 5/221 (2%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101 + + +++ ILG FY + PRPETE LV+ L + + + V + Sbjct: 113 VAQLTQNKPPQYILGHAPFYGREFMVDERVLIPRPETEQLVEWILQDA--SGTQGEPVSV 170 Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 LD+GTG+GA+ L+ E+P KG DIS AL +A+SNA G+ + ++SD F V Sbjct: 171 LDIGTGSGAIIETLMLENPRVKGFAADISPDALAVAESNAQRFGLYQ-LHFVESDVFQGV 229 Query: 162 EGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220 L FD+IVSNPPYI + V F+P+++L DGL+ Y IA G+++HL Sbjct: 230 ADLTFDIIVSNPPYIARTDEAEMDASVLAFEPQLALFADQDGLAIYAKIAAGLAQHLTAQ 289 Query: 221 GLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDYGGNDRVL 260 G EIGY Q VV + + V KD+ G DR++ Sbjct: 290 GRAYFEIGYKQGPAVVAMMQQALPDATVTLKKDFAGLDRMV 330 >gi|225858812|ref|YP_002740322.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptococcus pneumoniae 70585] gi|225720454|gb|ACO16308.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptococcus pneumoniae 70585] Length = 279 Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 79/239 (33%), Positives = 122/239 (51%), Gaps = 16/239 (6%) Query: 28 SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALA 87 V + ++ F+ + + H+ I+G DFY + L + PRPETE LV+ L Sbjct: 46 EVTTEEEKQFVEDIYQQLAAHKPAQYIIGQADFYGMHLKVDERVLIPRPETEELVELILT 105 Query: 88 FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147 +L + +LD+GTG+GA+ LAL K P + DIS +AL++A+ NA + Sbjct: 106 ENL-----ETNLSVLDIGTGSGAIALALAKNRPDWSVTAADISQEALDLARENAKNQNL- 159 Query: 148 ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207 + +SD F+ + +D+IVSNPPYI +GL V +P ++L DGL+ YR Sbjct: 160 -QIFLKKSDCFTEISEKYDIIVSNPPYISREDESEVGLNVLYSEPHLALFADEDGLAIYR 218 Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF-----ESRKLFLVNAFKDYGGNDRVLL 261 IA+ + +L G +EIGY Q V +F E R V KD G +R+++ Sbjct: 219 RIAEDATDYLKDSGKIYLEIGYKQGQCVPELFRKHLPEKR----VRTLKDQFGQNRMVV 273 >gi|306813890|ref|ZP_07448063.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli NC101] gi|222033011|emb|CAP75751.1| Protein methyltransferase hemK [Escherichia coli LF82] gi|305852527|gb|EFM52975.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli NC101] gi|312945842|gb|ADR26669.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli O83:H1 str. NRG 857C] gi|320195778|gb|EFW70403.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli WV_060327] gi|324005999|gb|EGB75218.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS 57-2] Length = 277 Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 92/258 (35%), Positives = 128/258 (49%), Gaps = 8/258 (3%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 RD+ L VTG ++ ++ L D Q L + R E I + G R+F+++ Sbjct: 22 RDAEILLEHVTGRGRTFILAFGETQLTDEQCQQLDALLTRRRDGEPIAHLTGVREFWSLP 81 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L +S T PRP+TE LV+ ALA LP RILDLGTGTGA+ LAL E P + Sbjct: 82 LFVSPATLIPRPDTECLVEQALA-RLP----EQPCRILDLGTGTGAIALALASERPDCEI 136 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183 VD A+ +A+ NA + + LQSDWFS++ G F +IVSNPPYI+ Sbjct: 137 TAVDRMPDAVSLAQRNAQHLAI-KNIHILQSDWFSALAGQQFAMIVSNPPYIDEQDPHLQ 195 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 +VR F+P +L G++ I + L G +E G+ Q V + F Sbjct: 196 QGDVR-FEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFILAG 254 Query: 244 LFLVNAFKDYGGNDRVLL 261 V +DYG N+RV L Sbjct: 255 YHDVETCRDYGDNERVTL 272 >gi|24375322|ref|NP_719365.1| hemK family protein [Shewanella oneidensis MR-1] gi|24350135|gb|AAN56809.1|AE015816_6 hemK family protein [Shewanella oneidensis MR-1] Length = 286 Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 80/237 (33%), Positives = 121/237 (51%), Gaps = 8/237 (3%) Query: 26 PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85 P+ L Q + R + + I+G R+F+++ ++ T PRP+TE+LV+SA Sbjct: 48 PEKALSVEQWKRFQQMVQRRQQGVPVAHIVGEREFWSLPFIVNDTTLIPRPDTEILVESA 107 Query: 86 LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145 L L ++LDLGTGTGA+ LAL E ++ VD A+ +AK+N TN Sbjct: 108 LNLPL-----ESNAKVLDLGTGTGAIALALASERAAWQITAVDKVEDAVALAKANR-TNL 161 Query: 146 VSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204 E+ + LQSDWFS+V FD+IVSNPPYI+ +VR F+P+ +L +G + Sbjct: 162 KLEQVEILQSDWFSAVTSHDFDLIVSNPPYIDEADEHLHQGDVR-FEPQSALTAADEGFA 220 Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 IA +L +G +E G+ Q V + V +D+G NDR + Sbjct: 221 DLYYIAKTARDYLKPNGYILLEHGFEQAVKLRAKLIELGYQNVATVRDFGSNDRCTM 277 >gi|294793890|ref|ZP_06759027.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Veillonella sp. 3_1_44] gi|294455460|gb|EFG23832.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Veillonella sp. 3_1_44] Length = 289 Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 78/218 (35%), Positives = 121/218 (55%), Gaps = 9/218 (4%) Query: 47 KHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGT 106 K + I+G +DF + ++ PRP+TE L++ L + P K VRILD+ T Sbjct: 71 KGHCVAAIIGEKDFMGLTFKVNDKVLIPRPDTETLIEHVLG-TYP---KDSNVRILDVCT 126 Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--- 163 G G + L+LL P GVG++IS AL +A+ N +++R L+SD FS++ G Sbjct: 127 GPGTILLSLLHYLPNACGVGLEISTDALLVAEENGERFNLNDRVQFLESDMFSALAGNAE 186 Query: 164 LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223 FD+IVSNPPYI + L +V + +P I+L GG DGL YR +A +LN +G Sbjct: 187 KFDLIVSNPPYIRTGDAKLLSQDVLN-EPHIALFGGEDGLEFYRILAKECRNYLNANGRV 245 Query: 224 SVEIGYNQKVDVVRIF-ESRKLFLVNAFKDYGGNDRVL 260 E+G++Q +V + E+ + + D GG++RV+ Sbjct: 246 VFEVGFDQAEEVGALLQETGQYSNIQFIADLGGHNRVV 283 >gi|296313419|ref|ZP_06863360.1| protein-(glutamine-N5) methyltransferase [Neisseria polysaccharea ATCC 43768] gi|296840050|gb|EFH23988.1| protein-(glutamine-N5) methyltransferase [Neisseria polysaccharea ATCC 43768] Length = 273 Score = 120 bits (300), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 90/259 (34%), Positives = 126/259 (48%), Gaps = 12/259 (4%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 ++ L V+ + Q+++ + D R R L E + ILG R+FY R Sbjct: 16 EARMLLQYVSEYTRVQLLMRGGEEMPDEVRQRADRLAQRRLNGEPVAYILGVREFYGRRF 75 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 T++ PRPETE LV++ LA LP + R+ DLGTG+GAV + + E P Sbjct: 76 TVNPSVLIPRPETEHLVEAVLA-RLP-----ENGRVWDLGTGSGAVAVTVALERPDAFVR 129 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS---VEGLFDVIVSNPPYIESVIVDC 182 DIS ALE A+ NA G R + WF + EG +D+IVSNPPYIE+ Sbjct: 130 ASDISPPALETARKNAADLGA--RVEFAYGSWFDTDMPSEGKWDIIVSNPPYIENGDKHL 187 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 ++R F+P+I+L DGLS RT+A G L + G +E G++Q V + Sbjct: 188 SQGDLR-FEPQIALTDFSDGLSCIRTLAQGAPDRLAEGGFLLLEHGFDQGAAVRGVLAEN 246 Query: 243 KLFLVNAFKDYGGNDRVLL 261 V D G DRV L Sbjct: 247 GFSGVETLPDLAGLDRVTL 265 >gi|327460377|gb|EGF06714.1| protein-(glutamine-N5) methyltransferase [Streptococcus sanguinis SK1057] Length = 276 Score = 120 bits (300), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 78/216 (36%), Positives = 111/216 (51%), Gaps = 8/216 (3%) Query: 46 LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLG 105 L H+ I+G DF + L + PRPETE LV+ L+ + + +LD+G Sbjct: 63 LAHKPAQYIIGSSDFLGLSLKVDERVLIPRPETEELVELILSEN-----PESSLSVLDIG 117 Query: 106 TGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF 165 TG+GA+ LAL P +K D+S AL +A NA +S F +QSD F ++ G F Sbjct: 118 TGSGAIALALANSRPDWKITASDLSNDALALAAENAQFCNLSLTF--VQSDCFEAISGSF 175 Query: 166 DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225 D+IVSNPPYI D +GL V +P ++L DG + YR IA +L + G + Sbjct: 176 DIIVSNPPYISEADKDEVGLNVLTSEPHMALFAEEDGYAVYRKIAGQAEDYLTEKGKIYL 235 Query: 226 EIGYNQKVDVVRIF-ESRKLFLVNAFKDYGGNDRVL 260 EIGY Q V + +S + KD G DR++ Sbjct: 236 EIGYKQGDGVAELLKQSFPHKRIRILKDQFGKDRMV 271 >gi|317121005|ref|YP_004101008.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Thermaerobacter marianensis DSM 12885] gi|315590985|gb|ADU50281.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Thermaerobacter marianensis DSM 12885] Length = 295 Score = 120 bits (300), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 74/249 (29%), Positives = 111/249 (44%), Gaps = 10/249 (4%) Query: 17 LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRP 76 L +V+ +PD L I+R + E + IL +FY ++ T PRP Sbjct: 46 LPGARVVAEPDLPLPPAAWARFVQWILRRARREPVAYILQQAEFYGRPFRVTPATLIPRP 105 Query: 77 ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136 ETE+LV+ L R + DLGTGTG V + L E P + + D S AL++ Sbjct: 106 ETEVLVEVVL-----RTVPAGPAVVADLGTGTGIVAVTLAAERPAWTVLASDCSAAALKV 160 Query: 137 AKSNAVTNGVSERFDTLQSDWFSSV-----EGLFDVIVSNPPYIESVIVDCLGLEVRDFD 191 A+ NA +GV R DW + G + SNPPY+ + + L E+ ++ Sbjct: 161 ARENAARHGVDGRMRFYVGDWAEPLLAAGWAGKLAAVASNPPYVAAADLPRLQAEIHRYE 220 Query: 192 PRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK 251 P ++L G GL YR + G R L G +E+G Q V + + V+ + Sbjct: 221 PHLALTPGATGLEAYRRLIPGAVRLLAPGGWIFLEVGAGQAPAVQHLLGAVGCRCVSCWP 280 Query: 252 DYGGNDRVL 260 D G RV+ Sbjct: 281 DLAGIPRVV 289 >gi|306825266|ref|ZP_07458608.1| protein-(glutamine-N5) methyltransferase [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|304432702|gb|EFM35676.1| protein-(glutamine-N5) methyltransferase [Streptococcus sp. oral taxon 071 str. 73H25AP] Length = 278 Score = 120 bits (300), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 85/262 (32%), Positives = 130/262 (49%), Gaps = 17/262 (6%) Query: 6 DSHSFLCR-VTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 +S SF+ R + LS + + + ++ F+ + H+ I+G DF+ ++ Sbjct: 22 ESLSFVYRSLKKLSFTDFVFALQQEVTEEEKQFVEEIFQQLAVHKPAQYIIGHVDFFGMQ 81 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L + PRPETE LV+ L + + ++ILD+GTG+GA+ L L K P + Sbjct: 82 LKVDERVLIPRPETEELVELILTEN-----PEENLKILDIGTGSGAIALGLAKNRPDWSV 136 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184 DIS ALE+A NA ++ F +SD F+ + +D+IVSNPPYI +G Sbjct: 137 TAADISQAALELASENARNQNLNIFFK--KSDCFAEISEKYDIIVSNPPYISREDESEVG 194 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF----- 239 L V +P ++L DGL+ YR IA+ +L G +EIGY Q V +F Sbjct: 195 LNVLHSEPHLALFADEDGLAIYRRIAEDAKDYLTDGGKIYLEIGYKQGQSVPALFRKHLP 254 Query: 240 ESRKLFLVNAFKDYGGNDRVLL 261 E R V KD G DR+++ Sbjct: 255 EKR----VRTLKDQFGQDRMVV 272 >gi|323187442|gb|EFZ72751.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli RN587/1] Length = 277 Score = 120 bits (300), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 92/258 (35%), Positives = 128/258 (49%), Gaps = 8/258 (3%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 RD+ L VTG ++ ++ L D Q L + R E I + G R+F+++ Sbjct: 22 RDAEILLEHVTGKGRTFILAFGETQLTDEQCQQLDALLTRRRDGEPIAHLTGVREFWSLP 81 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L +S T PRP+TE LV+ ALA LP RILDLGTGTGA+ LAL E P + Sbjct: 82 LFVSPATLIPRPDTECLVEQALA-RLP----EQPCRILDLGTGTGAIALALASERPDCEI 136 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183 VD A+ +A+ NA + + LQSDWFS++ G F +IVSNPPYI+ Sbjct: 137 TAVDRMPDAVALAQRNAQHLAI-KNIHILQSDWFSALAGQQFAMIVSNPPYIDEQDPHLQ 195 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 +VR F+P +L G++ I + L G +E G+ Q V + F Sbjct: 196 QGDVR-FEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFILAG 254 Query: 244 LFLVNAFKDYGGNDRVLL 261 V +DYG N+RV L Sbjct: 255 YHDVETCRDYGDNERVTL 272 >gi|157150169|ref|YP_001450440.1| protoporphyrinogen oxidase [Streptococcus gordonii str. Challis substr. CH1] gi|157074963|gb|ABV09646.1| possible protoporphyrinogen oxidase [Streptococcus gordonii str. Challis substr. CH1] Length = 276 Score = 120 bits (300), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 76/218 (34%), Positives = 114/218 (52%), Gaps = 12/218 (5%) Query: 46 LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLG 105 L H+ I+G DF + L + PRPETE LV+ L+ + + +LD+G Sbjct: 63 LAHKPAQYIIGSSDFNGLNLKVDERVLIPRPETEELVELILSEN-----PETPLSVLDIG 117 Query: 106 TGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF 165 TG+GA+ LAL P ++ D+S AL +A NA + G++ +QSD +++G F Sbjct: 118 TGSGAIALALANSRPDWQITASDLSRDALSLAAENAQSCGLN--LTLVQSDCLDAIQGKF 175 Query: 166 DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225 D+I SNPPYI D +GL V +P ++L DG + YR IA+ +L + G + Sbjct: 176 DIIASNPPYISEEDKDEVGLNVLTSEPHMALFAEEDGYAVYRKIAEQAGDYLTEKGKIYL 235 Query: 226 EIGYNQKVDVVRIFESRKLF---LVNAFKDYGGNDRVL 260 EIGY Q V +F R+ F + KD G DR++ Sbjct: 236 EIGYKQGDGVADLF--RQFFPQKRIRVLKDQFGKDRMV 271 >gi|221201721|ref|ZP_03574759.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Burkholderia multivorans CGD2M] gi|221207204|ref|ZP_03580214.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Burkholderia multivorans CGD2] gi|221172792|gb|EEE05229.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Burkholderia multivorans CGD2] gi|221178537|gb|EEE10946.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Burkholderia multivorans CGD2M] Length = 280 Score = 120 bits (300), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 86/262 (32%), Positives = 127/262 (48%), Gaps = 15/262 (5%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDR--QRFFLTNAIVRSLKHESIHRILGWRDFYNV 63 D+ L G + Q+I D LD +R+ A R E + +++G R+F+ Sbjct: 19 DARVLLAHALGWTRTQLITRSDRPLDAEAVERYRALEA--RRAAGEPVAQLVGMREFFGR 76 Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 ++ D PRPETELLV++AL I+ +LDLGTG+GA+ +++ E P + Sbjct: 77 PFDVTPDVLIPRPETELLVEAALDA----IDGLAHPAVLDLGTGSGAIAVSIAAERPDAR 132 Query: 124 GVGVDISCKALEIAKSNAVTNGVSER----FDTLQSDWFSSVEGL--FDVIVSNPPYIES 177 +D S AL +A+ NA + R LQSDW+++++ FD IVSNPPYI Sbjct: 133 VWALDRSAAALAVAQRNADKLLDARRPGGPLQWLQSDWYAALDPALAFDAIVSNPPYIAQ 192 Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237 ++R F+PR +L DGLS RTI G HL G +E GY+Q V Sbjct: 193 HDPHLSQGDLR-FEPRGALTDDADGLSAIRTIVAGARAHLKPGGTLWIEHGYDQAEAVRA 251 Query: 238 IFESRKLFLVNAFKDYGGNDRV 259 + S V + D +R Sbjct: 252 LLASHGFDAVESLADLAAIERT 273 >gi|15902969|ref|NP_358519.1| HemK protein [Streptococcus pneumoniae R6] gi|116517180|ref|YP_816385.1| HemK protein [Streptococcus pneumoniae D39] gi|15458533|gb|AAK99729.1| HemK protein homolog; possible protoporphyrinogen oxidase [Streptococcus pneumoniae R6] gi|116077756|gb|ABJ55476.1| HemK protein [Streptococcus pneumoniae D39] Length = 279 Score = 120 bits (300), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 79/239 (33%), Positives = 122/239 (51%), Gaps = 16/239 (6%) Query: 28 SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALA 87 V + ++ F+ + + H+ I+G DFY + L + PRPETE LV+ L Sbjct: 46 EVTTEEEKQFVEDIYQQLAAHKPAQYIIGQADFYGMHLKVDERVLIPRPETEELVELILT 105 Query: 88 FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147 +L + +LD+GTG+GA+ LAL K P + DIS +AL++A+ NA + Sbjct: 106 ENL-----ETNLSVLDIGTGSGAIALALAKNRPDWSVTAADISQEALDLARENAKNQNL- 159 Query: 148 ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207 + +SD F+ + +D+IVSNPPYI +GL V +P ++L DGL+ YR Sbjct: 160 -QIFLKKSDCFTEISEKYDIIVSNPPYISREDESEVGLNVLYSEPHLALFADEDGLAIYR 218 Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF-----ESRKLFLVNAFKDYGGNDRVLL 261 IA+ + +L G +EIGY Q V +F E R V KD G +R+++ Sbjct: 219 RIAEDATDYLKDSGKIYLEIGYKQGQCVPELFRKHLPEKR----VRTLKDQFGQNRMVV 273 >gi|261378642|ref|ZP_05983215.1| protein-(glutamine-N5) methyltransferase [Neisseria cinerea ATCC 14685] gi|269144979|gb|EEZ71397.1| protein-(glutamine-N5) methyltransferase [Neisseria cinerea ATCC 14685] Length = 273 Score = 120 bits (300), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 87/257 (33%), Positives = 124/257 (48%), Gaps = 12/257 (4%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 ++ L G S +++ + D R + R L E + ILG R+FY R Sbjct: 16 EARMLLQHAGGYSRIELVTRGGDEMPDSVRQHADMLVQRRLNGEPVAYILGVREFYGRRF 75 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 T++ PRPETE LV++A+ LP + I DLGTG+GAV L + E P Sbjct: 76 TVNPSVLIPRPETEHLVEAAIG-RLP-----ECGSIWDLGTGSGAVALTVALERPDAFVR 129 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS---VEGLFDVIVSNPPYIESVIVDC 182 DIS ALE A+ NA G + F WF + E +DVIVSNPPYIE+ + Sbjct: 130 ASDISLSALETARKNAADLGAAVEF--AHGSWFDTDMPSERQWDVIVSNPPYIENGDIHL 187 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 ++R F+P+ +L DG+S R +A+G ++L G +E G+NQ V + + Sbjct: 188 SQGDLR-FEPKNALTDFSDGMSCIRALAEGAPKYLADGGFLLLEHGFNQGGAVRGVLAAH 246 Query: 243 KLFLVNAFKDYGGNDRV 259 V D G DRV Sbjct: 247 GFTEVETLTDLAGLDRV 263 >gi|104780101|ref|YP_606599.1| methylase of polypeptide chain release factors [Pseudomonas entomophila L48] gi|95109088|emb|CAK13785.1| Methylase of polypeptide chain release factors [Pseudomonas entomophila L48] Length = 276 Score = 120 bits (300), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 78/237 (32%), Positives = 120/237 (50%), Gaps = 8/237 (3%) Query: 26 PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85 P+ ++ + R E + ILG + F+ + L ++ T PRP+TELLV++A Sbjct: 42 PERIVSSEAAELFAGYLERRRAGEPVAYILGQQGFWKLDLEVAPHTLIPRPDTELLVETA 101 Query: 86 LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145 L + R+LDLGTGTGA+ LAL E P ++ VD +A+ +A+ N G Sbjct: 102 L-----ELVPAKPARVLDLGTGTGAIALALASECPAWQVTAVDRIEEAVALAERNRQRLG 156 Query: 146 VSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204 + S W+ ++EG FD+I+SNPPYI + + +VR F+P +L G DGL Sbjct: 157 LGN-VQVRASHWYDALEGEHFDLILSNPPYIRAADPHLVAGDVR-FEPSSALVAGEDGLD 214 Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 R I +HL G +E GY+Q V + + V + D GG++R+ L Sbjct: 215 DLRVIVAQAPQHLLPGGWLLLEHGYDQAPAVRELLSAGGFVDVASRVDLGGHERISL 271 >gi|220933706|ref|YP_002512605.1| HemK protein, putative protoporphyrinogen oxidase [Thioalkalivibrio sp. HL-EbGR7] gi|219995016|gb|ACL71618.1| HemK protein, putative protoporphyrinogen oxidase [Thioalkalivibrio sp. HL-EbGR7] Length = 274 Score = 120 bits (300), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 73/204 (35%), Positives = 109/204 (53%), Gaps = 9/204 (4%) Query: 58 RDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117 R F+ + L + + PRPETELLV++AL I + DLGTG+GA+ LAL Sbjct: 71 RGFWTLDLAVGPEVLIPRPETELLVETALGL----IPTDAAWDLADLGTGSGAIALALAS 126 Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEG-LFDVIVSNPPYI 175 E P + V D S AL +A++NA +G++ RF +Q +W++ + G F ++VSNPPY+ Sbjct: 127 ERPACRVVATDKSPGALAVAEANARDHGLANLRF--VQGEWWAPLAGERFHLVVSNPPYV 184 Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235 ++R F+P +L G DGL R I HL+ G +E GY+Q V Sbjct: 185 AEADPHLARGDLR-FEPPTALASGPDGLDDLRRIIKAAPTHLHPGGHLLLEHGYDQGEAV 243 Query: 236 VRIFESRKLFLVNAFKDYGGNDRV 259 + + V ++D GGN+RV Sbjct: 244 RALLRTAGFSEVQTWRDLGGNERV 267 >gi|325696482|gb|EGD38372.1| protein-(glutamine-N5) methyltransferase [Streptococcus sanguinis SK160] Length = 276 Score = 120 bits (300), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 78/216 (36%), Positives = 111/216 (51%), Gaps = 8/216 (3%) Query: 46 LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLG 105 L H+ I+G DF + L + PRPETE LV+ L+ + + +LD+G Sbjct: 63 LAHKPAQYIIGSSDFLGLSLKVDERVLIPRPETEELVELILSEN-----PESSLSVLDIG 117 Query: 106 TGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF 165 TG+GA+ LAL P +K D+S AL +A NA +S F +QSD F ++ G F Sbjct: 118 TGSGAIALALANSRPDWKITASDLSNDALALAAENAQFCNLSLTF--VQSDCFEAISGSF 175 Query: 166 DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225 D+IVSNPPYI D +GL V +P ++L DG + YR IA +L + G + Sbjct: 176 DIIVSNPPYISEADKDEVGLNVLTSEPHMALFAEEDGYAVYRKIAGQAEDYLTEKGKIYL 235 Query: 226 EIGYNQKVDVVRIF-ESRKLFLVNAFKDYGGNDRVL 260 EIGY Q V + +S + KD G DR++ Sbjct: 236 EIGYKQGDGVAELLKQSFPHKRIRILKDQFGKDRMV 271 >gi|269926537|ref|YP_003323160.1| modification methylase, HemK family [Thermobaculum terrenum ATCC BAA-798] gi|269790197|gb|ACZ42338.1| modification methylase, HemK family [Thermobaculum terrenum ATCC BAA-798] Length = 283 Score = 120 bits (300), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 73/224 (32%), Positives = 120/224 (53%), Gaps = 10/224 (4%) Query: 6 DSHSFLCRVTGLSSHQVI--VDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63 DS L V G+ ++ ++ + L D+++F + R +HE I ILG+++FY Sbjct: 26 DSELLLASVLGIDRTSLLANLNQEVSLPDQEKFL--GLVERRSRHEPIAYILGYKEFYGR 83 Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 +S PRPETE+LVD A ++ + V + D+GTG+GA+ +++ E P K Sbjct: 84 LFCVSRSVLIPRPETEMLVDLA-----KKLATKGAV-VADVGTGSGAIAISIAIERPDVK 137 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183 V DIS AL++A+ N +GV +R LQ + V + D++V+N PYI D L Sbjct: 138 VVATDISHDALDVARRNVQKHGVQDRVFLLQGNLLDPVHEMVDMVVANLPYIPESEADSL 197 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227 +V ++PR +L GG DGL + R + + +H + C +E+ Sbjct: 198 QPDVILWEPRTALFGGEDGLEYIRELLGQLPKHCSYGAYCLLEV 241 >gi|194436964|ref|ZP_03069063.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli 101-1] gi|253773789|ref|YP_003036620.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254161294|ref|YP_003044402.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli B str. REL606] gi|297517276|ref|ZP_06935662.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli OP50] gi|300920410|ref|ZP_07136844.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS 115-1] gi|300928242|ref|ZP_07143779.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS 187-1] gi|301648135|ref|ZP_07247888.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS 146-1] gi|307137827|ref|ZP_07497183.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli H736] gi|331641742|ref|ZP_08342877.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli H736] gi|194423947|gb|EDX39935.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli 101-1] gi|242376991|emb|CAQ31714.1| protein-(glutamine-N5) methyltransferase [Escherichia coli BL21(DE3)] gi|253324833|gb|ACT29435.1| modification methylase, HemK family [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253973195|gb|ACT38866.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli B str. REL606] gi|253977409|gb|ACT43079.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli BL21(DE3)] gi|300412543|gb|EFJ95853.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS 115-1] gi|300463711|gb|EFK27204.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS 187-1] gi|301073721|gb|EFK88527.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS 146-1] gi|309701511|emb|CBJ00818.1| protein methyltransferase hemk (protein-glutamine N methyltransferase) [Escherichia coli ETEC H10407] gi|315615946|gb|EFU96572.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli 3431] gi|323937933|gb|EGB34197.1| protein-(glutamine-N5) methyltransferase [Escherichia coli E1520] gi|323962790|gb|EGB58368.1| protein-(glutamine-N5) methyltransferase [Escherichia coli H489] gi|323973390|gb|EGB68577.1| protein-(glutamine-N5) methyltransferase [Escherichia coli TA007] gi|331038540|gb|EGI10760.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli H736] gi|332342794|gb|AEE56128.1| protein-(glutamine-N5) methyltransferase HemK [Escherichia coli UMNK88] Length = 277 Score = 120 bits (300), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 92/258 (35%), Positives = 128/258 (49%), Gaps = 8/258 (3%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 RD+ L VTG ++ ++ L D Q L + R E I + G R+F+++ Sbjct: 22 RDAEILLEHVTGKGRTFILAFGETQLTDEQCQQLDALLTRRRDGEPIAHLTGVREFWSLP 81 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L +S T PRP+TE LV+ ALA LP RILDLGTGTGA+ LAL E P + Sbjct: 82 LFVSPATLIPRPDTECLVEQALA-RLP----EQPCRILDLGTGTGAIALALASERPDCEI 136 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183 VD A+ +A+ NA + + LQSDWFS++ G F +IVSNPPYI+ Sbjct: 137 TAVDRMPDAVALAQRNAQHLAI-KNIRILQSDWFSALAGQQFTMIVSNPPYIDEQDPHLQ 195 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 +VR F+P +L G++ I + L G +E G+ Q V + F Sbjct: 196 QGDVR-FEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFILAG 254 Query: 244 LFLVNAFKDYGGNDRVLL 261 V +DYG N+RV L Sbjct: 255 YHDVETCRDYGDNERVTL 272 >gi|329117399|ref|ZP_08246116.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptococcus parauberis NCFD 2020] gi|326907804|gb|EGE54718.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptococcus parauberis NCFD 2020] Length = 282 Score = 120 bits (300), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 84/227 (37%), Positives = 121/227 (53%), Gaps = 11/227 (4%) Query: 38 LTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR 96 L +I+ LK H S I G F ++ L++ PRPETE LV SL E Sbjct: 54 LFQSIMTQLKTHRSPQYITGNAYFRDLILSVDERVLIPRPETEELV------SLILEEHS 107 Query: 97 DV-VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155 D +R+LD+GTG+GA+ L L KE P ++ DIS AL +A+ N + + L S Sbjct: 108 DQSLRVLDIGTGSGAIALGLKKERPNWQIDAADISLDALSLAQENG--RALDLEINWLHS 165 Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215 D FS++ +D+IVSNPPYI D +GL V +P ++L +GL+ YR I + S Sbjct: 166 DLFSNILDKYDIIVSNPPYIAFEDKDEVGLNVWHSEPHLALFADDNGLAIYRAILEQASH 225 Query: 216 HLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDYGGNDRVLL 261 +L +DG EIGY Q D+ + E+ V +DY G DR+++ Sbjct: 226 YLTEDGAIYFEIGYKQGQDLKELAEANFPQCRVRLLQDYFGKDRMVV 272 >gi|194398713|ref|YP_002037656.1| methyltransferase, HemK family protein [Streptococcus pneumoniae G54] gi|194358380|gb|ACF56828.1| methyltransferase, HemK family protein [Streptococcus pneumoniae G54] Length = 279 Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 80/239 (33%), Positives = 119/239 (49%), Gaps = 16/239 (6%) Query: 28 SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALA 87 V + ++ F+ + + H+ I+G DFY + L + PRPETE LV+ L Sbjct: 46 EVTTEEEKQFVEDIYQQLAAHKPAQYIIGQADFYGMHLKVDERVLIPRPETEELVELILT 105 Query: 88 FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147 +L + +LD+GTG+GA+ LAL K P + D+S +ALE+A NA + Sbjct: 106 ENL-----ETNLSVLDIGTGSGAIALALAKNRPDWSVTAADVSQEALELASENASDQNFN 160 Query: 148 ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207 F +SD F+ + +D+IVSNPPYI +GL V +P ++L DGL+ Y Sbjct: 161 IFFK--KSDCFAEISEKYDIIVSNPPYISREDESEVGLNVLHSEPHLALFADEDGLAIYC 218 Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF-----ESRKLFLVNAFKDYGGNDRVLL 261 IA+ +L G +EIGY Q V +F E R V KD G DR+++ Sbjct: 219 RIAEDAKDYLKDGGKIYLEIGYKQGQSVPELFRKHLPEKR----VRTLKDQFGQDRMVV 273 >gi|304388692|ref|ZP_07370752.1| protein-(glutamine-N5) methyltransferase [Neisseria meningitidis ATCC 13091] gi|254672055|emb|CBA04658.1| heme biosynthesis protein [Neisseria meningitidis alpha275] gi|304337359|gb|EFM03533.1| protein-(glutamine-N5) methyltransferase [Neisseria meningitidis ATCC 13091] Length = 423 Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 85/221 (38%), Positives = 113/221 (51%), Gaps = 12/221 (5%) Query: 44 RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103 R L E + ILG R+FY R T++ PRPETE LV++ LA LP + R+ D Sbjct: 204 RRLNGEPVAYILGVREFYGRRFTVNPSVLIPRPETEHLVEAVLA-RLP-----ENGRVWD 257 Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS--- 160 LGTG+GAV + + E P DIS ALE A+ NA G R + WF + Sbjct: 258 LGTGSGAVAVTVALERPDAFVRASDISPPALETARKNAADLGA--RVEFAHGSWFDTDMP 315 Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220 EG +D+IVSNPPYIE+ ++R F+P+I+L DGLS RT+A G L + Sbjct: 316 SEGKWDIIVSNPPYIENGDKHLSQGDLR-FEPQIALTDFSDGLSCIRTLAQGAPDRLAEG 374 Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 G +E G++Q V + V D G DRV L Sbjct: 375 GFLLLEHGFDQGAAVRGVLAENGFSGVETLPDLAGLDRVTL 415 >gi|193069963|ref|ZP_03050911.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli E110019] gi|192956716|gb|EDV87171.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli E110019] Length = 277 Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 92/258 (35%), Positives = 128/258 (49%), Gaps = 8/258 (3%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 RD+ L VTG ++ ++ L D Q L + R E I + G R+F+++ Sbjct: 22 RDAEILLEHVTGRGRTFILAFGETQLTDEQCQQLDALLTRRRDGEPIAHLTGVREFWSLP 81 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L +S T PRP+TE LV+ ALA LP RILDLGTGTGA+ LAL E P + Sbjct: 82 LFVSPATLIPRPDTECLVEQALA-RLP----EQPCRILDLGTGTGAIALALASERPDCEI 136 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183 + VD A+ A+ NA + + LQSDWFS++ G F +IVSNPPYI+ Sbjct: 137 IAVDRMPDAVSQAQRNAQHLAI-KNIHILQSDWFSALAGQQFAMIVSNPPYIDEQDPHLQ 195 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 +VR F+P +L G++ I + L G +E G+ Q V + F Sbjct: 196 QGDVR-FEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFILAG 254 Query: 244 LFLVNAFKDYGGNDRVLL 261 V +DYG N+RV L Sbjct: 255 YHDVETCRDYGDNERVTL 272 >gi|229524174|ref|ZP_04413579.1| methylase of polypeptide chain release factors [Vibrio cholerae bv. albensis VL426] gi|229337755|gb|EEO02772.1| methylase of polypeptide chain release factors [Vibrio cholerae bv. albensis VL426] Length = 286 Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 89/260 (34%), Positives = 127/260 (48%), Gaps = 13/260 (5%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ LC V ++ PD L+ L + R E + ILG R+F+++ L Sbjct: 27 DAAVLLCHVLAKPRSYLLTWPDKTLEKPTLVSLELLLARRRAGEPMAYILGEREFWSLPL 86 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV--RILDLGTGTGAVCLALLKESPFFK 123 +S T PRP+TE LV+ AL +K ++ +LDLGTGTGA+ LAL E P + Sbjct: 87 KVSPSTLIPRPDTERLVELAL-------DKAALIDGELLDLGTGTGAIALALASELPTRQ 139 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIESVIVD 181 G+D+ +A E+A+ NA + LQ WFS + F +IVSNPPYIE Sbjct: 140 VTGIDLRPEAAELARENATRLAI-HNAQFLQGSWFSPLADGTKFALIVSNPPYIEENDPH 198 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P+ +L +GL+ R I+ L G E GY+Q V V I Sbjct: 199 LSLGDVR-FEPKSALVAAENGLADIRHISTHAPHFLLDGGWLLFEHGYDQGVAVRTILCD 257 Query: 242 RKLFLVNAFKDYGGNDRVLL 261 + +DY G+DRV L Sbjct: 258 LGYQNIITEQDYAGHDRVTL 277 >gi|254671226|emb|CBA08440.1| heme biosynthesis protein [Neisseria meningitidis alpha153] Length = 423 Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 85/221 (38%), Positives = 113/221 (51%), Gaps = 12/221 (5%) Query: 44 RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103 R L E + ILG R+FY R T++ PRPETE LV++ LA LP + R+ D Sbjct: 204 RRLNGEPVAYILGVREFYGRRFTVNPSVLIPRPETEHLVEAVLA-RLP-----ENGRVWD 257 Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS--- 160 LGTG+GAV + + E P DIS ALE A+ NA G R + WF + Sbjct: 258 LGTGSGAVAVTVALERPDAFVRASDISPPALETARKNAADLGA--RVEFAHGSWFDTDMP 315 Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220 EG +D+IVSNPPYIE+ ++R F+P+I+L DGLS RT+A G L + Sbjct: 316 SEGKWDIIVSNPPYIENGDKHLSQGDLR-FEPQIALTDFSDGLSCIRTLAQGAPDRLAEG 374 Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 G +E G++Q V + V D G DRV L Sbjct: 375 GFLLLEHGFDQGAAVRGVLAENGFSGVETLPDLAGLDRVTL 415 >gi|304321560|ref|YP_003855203.1| modification methylase, HemK family protein [Parvularcula bermudensis HTCC2503] gi|303300462|gb|ADM10061.1| modification methylase, HemK family protein [Parvularcula bermudensis HTCC2503] Length = 318 Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 73/218 (33%), Positives = 115/218 (52%), Gaps = 9/218 (4%) Query: 44 RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103 R + E + + G ++F+ ++ PRPETELLV++AL LP R+LD Sbjct: 104 RRRRGEPVAYLTGEQEFFGRDFHVTPAVLIPRPETELLVEAAL-RPLPHGG-----RLLD 157 Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG 163 LGTG+G + + +L E P +G +D+S +AL +A+ NA +GV R + ++ G Sbjct: 158 LGTGSGCIAVTILAERPDSRGEAIDLSAEALAVARINARRHGVEGRLGLAPVPFEAAPSG 217 Query: 164 LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223 FD+I+SNPPYI L V ++PR +L G DGL YR + +++ L G Sbjct: 218 PFDLILSNPPYIPD--DQSLPTSVESYEPRQALRAGADGLDAYRVLGPVIAQRLAPQGTA 275 Query: 224 SVEIGYNQKVDVVRIF-ESRKLFLVNAFKDYGGNDRVL 260 +EIG +Q V + S + V+ +D G DR++ Sbjct: 276 LLEIGADQAAAVTALLRRSFPVHQVSVKRDLAGLDRMV 313 >gi|221213332|ref|ZP_03586307.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Burkholderia multivorans CGD1] gi|221166784|gb|EED99255.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Burkholderia multivorans CGD1] Length = 280 Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 86/262 (32%), Positives = 128/262 (48%), Gaps = 15/262 (5%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDR--QRFFLTNAIVRSLKHESIHRILGWRDFYNV 63 D+ L G + Q+I D LD +R+ + A R E + +++G R+F+ Sbjct: 19 DARVLLAHALGWTRTQLITRGDRPLDAEAVERYRVLEA--RRAAGEPVAQLVGMREFFGR 76 Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 ++ D PRPETELLV++AL I+ +LDLGTG+GA+ +++ E P + Sbjct: 77 PFDVTPDVLIPRPETELLVEAALDA----IDGLAHPAVLDLGTGSGAIAVSIAAERPDAR 132 Query: 124 GVGVDISCKALEIAKSNAVTNGVSER----FDTLQSDWFSSVEGL--FDVIVSNPPYIES 177 +D S AL +A+ NA + R LQSDW+++++ FD IVSNPPYI Sbjct: 133 VWALDRSAAALAVAQRNADKLLDARRPGGPLQWLQSDWYAALDPALAFDAIVSNPPYIAR 192 Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237 ++R F+PR +L DGLS RTI G HL G +E GY+Q V Sbjct: 193 HDPHLSQGDLR-FEPRGALTDDADGLSAIRTIVAGARAHLKPGGTLWIEHGYDQAEAVRA 251 Query: 238 IFESRKLFLVNAFKDYGGNDRV 259 + S V + D +R Sbjct: 252 LLASHGFDAVESLADLAAIERT 273 >gi|78358025|ref|YP_389474.1| HemK family modification methylase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78220430|gb|ABB39779.1| [protein release factor]-glutamine N5-methyltransferase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 297 Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 76/247 (30%), Positives = 126/247 (51%), Gaps = 11/247 (4%) Query: 21 QVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETEL 80 Q++V +L +++ I+R + E + + G R+FY +S+DT PRP+TEL Sbjct: 49 QLLVRRGHMLTEKEYAQAEKLILRRAEGEPVAYLTGSREFYGREFAVSTDTLIPRPDTEL 108 Query: 81 LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140 L+D+ L P +R DLGTG+G + +++ E P G VDIS AL A+ N Sbjct: 109 LIDT-LKKEYP---PHAALRFADLGTGSGCIAVSVAAEMPSAHGTAVDISSGALHTAREN 164 Query: 141 AVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL-- 196 A + V++R +Q+D+ S + FDV++SNPPY+ + + L EVR +P+ +L Sbjct: 165 AARHRVADRVAFVQADFTSPLFRPASFDVVLSNPPYVSATEYETLSPEVRCHEPQRALVP 224 Query: 197 -DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR--KLFLVNAFKDY 253 GL H + L GL +E G+ Q D++ + +++ + + +D Sbjct: 225 DTPASTGLEHAAALLPLAFGWLKPGGLFLMEFGWKQGPDIMAMVKAQHGQWTVAVILQDL 284 Query: 254 GGNDRVL 260 G DR L Sbjct: 285 AGRDRAL 291 >gi|225629882|ref|YP_002726673.1| modification methylase, HemK family [Wolbachia sp. wRi] gi|225591863|gb|ACN94882.1| modification methylase, HemK family [Wolbachia sp. wRi] Length = 284 Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 79/257 (30%), Positives = 138/257 (53%), Gaps = 8/257 (3%) Query: 6 DSHSFLCRVTGLSSHQVIVD-PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 D + V G+ +IV+ D V +++ F R+ ++ I +I+G R+F++ Sbjct: 26 DCEIIMQHVLGVERSFIIVNHADQVPMEKELLFWKLTKKRAERY-PISQIIGNREFWSKN 84 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 ++ +PRP++E L+ + L + P ++R ++I D GTGTG + +++L E + G Sbjct: 85 FIVNQHVLDPRPDSETLISTVLKY-YPNKKQR--LKIADFGTGTGCLLISVLSEYKYAVG 141 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184 VG + S +A ++A N + + R S W + LFD+I+SNPPYI+ + L Sbjct: 142 VGFEKSLEAYKVAYQNTKKHDLLSRAKIFPSSWIECSD-LFDLIISNPPYIKRSKLKDLQ 200 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 EV+ +P+ +LDGGIDGL+ Y +I + R L K+G +EIG +Q ++ +I S +L Sbjct: 201 AEVQK-EPKTALDGGIDGLNCYLSIFPILRRCLKKNGFAILEIGEDQS-NIDKIIPSYEL 258 Query: 245 FLVNAFKDYGGNDRVLL 261 D G R ++ Sbjct: 259 AFQEYVYDLAGMKRCIV 275 >gi|90961567|ref|YP_535483.1| peptide release factor-glutamine N5-methyltransferase [Lactobacillus salivarius UCC118] gi|90820761|gb|ABD99400.1| Peptide release factor-glutamine N5-methyltransferase [Lactobacillus salivarius UCC118] Length = 279 Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 86/259 (33%), Positives = 130/259 (50%), Gaps = 7/259 (2%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 L D +C Q++++ + +DD+ L I + + ++G++DFY Sbjct: 23 TLEDVDYLICGQMVWDKTQLLMNYRTRIDDKNYQELQEKIELYNQDYPLQYLIGYQDFYG 82 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 +RL ++ DT PRPETE LVD L + K + +LD+GTGTGA+ LAL + Sbjct: 83 LRLKVTKDTLIPRPETEELVDWILNDN----SKNENYDVLDVGTGTGAIGLALKSIRSNW 138 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182 DIS AL++AK NA + F T SD F +EG D+IVSNPPYI Sbjct: 139 NIFLSDISEPALKVAKENAQNLNLDVSFST--SDLFEKIEGKKDIIVSNPPYISENEKIY 196 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF-ES 241 + V +++P +L +GL Y IA+ + L + +EIG+ Q V +IF +S Sbjct: 197 MDKSVLNYEPHQALFAKNNGLEIYERIANESGKLLKQGSKIYMEIGFLQGEAVKKIFKDS 256 Query: 242 RKLFLVNAFKDYGGNDRVL 260 + KD GNDR++ Sbjct: 257 FPNSEITLKKDINGNDRMI 275 >gi|322376709|ref|ZP_08051202.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptococcus sp. M334] gi|321282516|gb|EFX59523.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptococcus sp. M334] Length = 278 Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 84/262 (32%), Positives = 130/262 (49%), Gaps = 17/262 (6%) Query: 6 DSHSFLCR-VTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 +S SF+ R + LS + + + ++ F+ + H+ I+G DF+ ++ Sbjct: 22 ESLSFVYRSLKNLSFTDFVFALQQEVTEEEKQFVKEIYQQLAAHKPAQYIIGHADFFGMQ 81 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L + PRPETE LV+ L + + + +LD+GTG+GA+ LAL K P + Sbjct: 82 LIVDERVLIPRPETEELVEIILDEN-----HEENLSVLDIGTGSGAIALALSKNRPDWSV 136 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184 DIS +ALE+A NA + + +SD F+ + +D+IVSNPPYI +G Sbjct: 137 TAADISQEALELASENAKNQNL--QIFLKKSDCFTEISEKYDIIVSNPPYISREDESEVG 194 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF----- 239 L V +P ++L DGL+ YR IA+ +L G +EIGY Q V +F Sbjct: 195 LNVLHSEPHLALFADEDGLAIYRRIAEDAKDYLKDGGKIYLEIGYKQGQSVPELFRKHLP 254 Query: 240 ESRKLFLVNAFKDYGGNDRVLL 261 E R V KD G DR+++ Sbjct: 255 EKR----VRTLKDQFGQDRMVV 272 >gi|239501458|ref|ZP_04660768.1| methyl transferase [Acinetobacter baumannii AB900] Length = 273 Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 76/213 (35%), Positives = 110/213 (51%), Gaps = 12/213 (5%) Query: 49 ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108 E + + G + F+ + L ++SDT PRP+TE+LV++ L +LP+ I+DLGTGT Sbjct: 63 EPLAYVTGSQPFWTLDLKVTSDTLVPRPDTEVLVETVLNLNLPK-----NANIVDLGTGT 117 Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVE-GLFD 166 GA+ LAL E P + DI L++AK NA T+G+ +F WF ++E FD Sbjct: 118 GAIALALASERPDWFVTATDIYAPTLDVAKENAQTHGLHHVKFAC--GAWFEALEPQQFD 175 Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE 226 +IVSNPPYI+ L +PR +L GL+ I L G ++E Sbjct: 176 LIVSNPPYIDPEDEHMQALAT---EPRRALVADHHGLADIEIIIAQGKNWLKPQGWIALE 232 Query: 227 IGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRV 259 GY+Q V +F + +DYG NDRV Sbjct: 233 HGYDQGQAVRNVFAEHGFSEIRTIQDYGRNDRV 265 >gi|260549388|ref|ZP_05823607.1| protein-(glutamine-N5) methyltransferase [Acinetobacter sp. RUH2624] gi|260407497|gb|EEX00971.1| protein-(glutamine-N5) methyltransferase [Acinetobacter sp. RUH2624] Length = 271 Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 78/215 (36%), Positives = 111/215 (51%), Gaps = 12/215 (5%) Query: 49 ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108 E + + G + F+ + L ++SDT PRP+TE+LV++ L +LP + I+DLGTGT Sbjct: 63 EPLAYVTGSQPFWTLDLKVTSDTLVPRPDTEVLVETVLNLNLP-----NKANIVDLGTGT 117 Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVE-GLFD 166 GA+ LAL E P + DI L IAK NA T+G+ +F WF ++E FD Sbjct: 118 GAIALALASERPDWFVTATDIYAPTLNIAKENAQTHGLYHVKFAC--GAWFEALEPQQFD 175 Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE 226 +IVSNPPYI+ + ++ +PR +L GL+ I L G +E Sbjct: 176 LIVSNPPYIDP---EDEHMQALATEPRRALVADHQGLADIEIIIAQGKNWLKPQGWIVLE 232 Query: 227 IGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 GY+Q V IF + +DYG NDRV L Sbjct: 233 HGYDQGQAVRGIFTEHGFSEIKTIQDYGQNDRVTL 267 >gi|149012960|ref|ZP_01833849.1| HemK protein [Streptococcus pneumoniae SP19-BS75] gi|303255577|ref|ZP_07341628.1| hemK protein [Streptococcus pneumoniae BS455] gi|303260465|ref|ZP_07346433.1| hemK protein [Streptococcus pneumoniae SP-BS293] gi|303262822|ref|ZP_07348759.1| hemK protein [Streptococcus pneumoniae SP14-BS292] gi|303265292|ref|ZP_07351202.1| hemK protein [Streptococcus pneumoniae BS397] gi|303266499|ref|ZP_07352386.1| hemK protein [Streptococcus pneumoniae BS457] gi|303268382|ref|ZP_07354178.1| hemK protein [Streptococcus pneumoniae BS458] gi|147763113|gb|EDK70054.1| HemK protein [Streptococcus pneumoniae SP19-BS75] gi|301801855|emb|CBW34573.1| putative methyltransferase [Streptococcus pneumoniae INV200] gi|302597433|gb|EFL64528.1| hemK protein [Streptococcus pneumoniae BS455] gi|302636020|gb|EFL66518.1| hemK protein [Streptococcus pneumoniae SP14-BS292] gi|302638377|gb|EFL68844.1| hemK protein [Streptococcus pneumoniae SP-BS293] gi|302642103|gb|EFL72454.1| hemK protein [Streptococcus pneumoniae BS458] gi|302643950|gb|EFL74210.1| hemK protein [Streptococcus pneumoniae BS457] gi|302645157|gb|EFL75394.1| hemK protein [Streptococcus pneumoniae BS397] Length = 279 Score = 119 bits (299), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 79/239 (33%), Positives = 120/239 (50%), Gaps = 16/239 (6%) Query: 28 SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALA 87 V + ++ F+ + + H+ I+G DFY + L + PRPETE LV+ L Sbjct: 46 EVTTEEEKQFVEDIYQQLAAHKPAQYIIGQADFYGMHLKVDERVLIPRPETEELVELILT 105 Query: 88 FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147 +L + +LD+GTG+GA+ LAL K P + D+S +ALE+A NA ++ Sbjct: 106 ENL-----ETNLSVLDIGTGSGAIALALAKNRPDWSVTAADVSQEALELASENASNQNLN 160 Query: 148 ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207 F +SD F+ + +D+IVSNPPYI +GL V +P ++L DGL+ Y Sbjct: 161 IFFK--KSDCFAEISEKYDIIVSNPPYISREDESEVGLNVLHSEPHLALFADEDGLAIYC 218 Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF-----ESRKLFLVNAFKDYGGNDRVLL 261 IA+ +L G +EIGY Q V +F E R V KD G +R+++ Sbjct: 219 RIAEDAKDYLKDGGKIYLEIGYKQGQSVPELFRKHLPEKR----VRTLKDQFGQNRMVV 273 >gi|168483092|ref|ZP_02708044.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptococcus pneumoniae CDC1873-00] gi|182683969|ref|YP_001835716.1| hemK protein [Streptococcus pneumoniae CGSP14] gi|172043511|gb|EDT51557.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptococcus pneumoniae CDC1873-00] gi|182629303|gb|ACB90251.1| hemK protein [Streptococcus pneumoniae CGSP14] Length = 279 Score = 119 bits (299), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 79/239 (33%), Positives = 120/239 (50%), Gaps = 16/239 (6%) Query: 28 SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALA 87 V + ++ F+ + + H+ I+G DFY + L + PRPETE LV+ L Sbjct: 46 EVTTEEEKQFVEDIYQQLAAHKPAQYIIGQADFYGMHLKVDERVLIPRPETEELVELILT 105 Query: 88 FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147 +L + +LD+GTG+GA+ LAL K P + D+S +ALE+A NA ++ Sbjct: 106 ENL-----ETNLSVLDIGTGSGAIALALAKNRPDWSVTAADVSQEALELASENASNQNLN 160 Query: 148 ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207 F +SD F+ + +D+IVSNPPYI +GL V +P ++L DGL+ Y Sbjct: 161 IFFK--KSDCFAEISEKYDIIVSNPPYISREDESEVGLNVLHSEPHLALFADEDGLAIYC 218 Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF-----ESRKLFLVNAFKDYGGNDRVLL 261 IA+ +L G +EIGY Q V +F E R V KD G +R+++ Sbjct: 219 RIAEDAKDYLKDGGKIYLEIGYKQGQSVPELFRKHLPEKR----VRTLKDQFGQNRMVV 273 >gi|161526058|ref|YP_001581070.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Burkholderia multivorans ATCC 17616] gi|189349227|ref|YP_001944855.1| HemK protein [Burkholderia multivorans ATCC 17616] gi|160343487|gb|ABX16573.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Burkholderia multivorans ATCC 17616] gi|189333249|dbj|BAG42319.1| HemK protein [Burkholderia multivorans ATCC 17616] Length = 280 Score = 119 bits (299), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 86/262 (32%), Positives = 127/262 (48%), Gaps = 15/262 (5%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDR--QRFFLTNAIVRSLKHESIHRILGWRDFYNV 63 D+ L G + Q+I D LD +R+ A R E + +++G R+F+ Sbjct: 19 DARVLLAHALGWTRTQLITRGDRPLDAEAVERYRALEA--RRAAGEPVAQLVGMREFFGR 76 Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 ++ D PRPETELLV++AL I+ +LDLGTG+GA+ +++ E P + Sbjct: 77 PFDVTPDVLIPRPETELLVEAALDA----IDGLAHPAVLDLGTGSGAIAVSIAAERPDAR 132 Query: 124 GVGVDISCKALEIAKSNAVTNGVSER----FDTLQSDWFSSVEGL--FDVIVSNPPYIES 177 +D S AL +A+ NA + R LQSDW+++++ FD IVSNPPYI Sbjct: 133 VWALDRSAAALAVAQRNADKLLDARRPGGPLQWLQSDWYAALDPALAFDAIVSNPPYIAQ 192 Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237 ++R F+PR +L DGLS RTI G HL G +E GY+Q V Sbjct: 193 HDPHLSQGDLR-FEPRGALTDDADGLSAIRTIVAGARAHLKPGGTLWIEHGYDQAEAVRA 251 Query: 238 IFESRKLFLVNAFKDYGGNDRV 259 + S V + D +R Sbjct: 252 LLASHGFDAVESLADLAAIERT 273 >gi|54295178|ref|YP_127593.1| hypothetical protein lpl2258 [Legionella pneumophila str. Lens] gi|53755010|emb|CAH16498.1| hypothetical protein lpl2258 [Legionella pneumophila str. Lens] Length = 287 Score = 119 bits (299), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 83/251 (33%), Positives = 128/251 (50%), Gaps = 7/251 (2%) Query: 10 FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69 LC V + + PD+++ Q I + + I I G R+F+++ L ++ Sbjct: 29 LLCHVLNKNRAYLFAHPDALVSPEQIETYLQMIKQRAEGLPIAYITGQREFWSLSLKVTP 88 Query: 70 DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129 + PR ETE LV+ AL I ++ V +LDLGTG+GA+ LAL KE P ++ D Sbjct: 89 NVLIPRHETEHLVELALEL----IPDKENVSVLDLGTGSGAIALALAKERPLWRIDACDF 144 Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVR 188 S +ALE+A NA T G++ + S WF+++ + IVSNPPYI +VR Sbjct: 145 SKEALELACYNAKTLGLN-NINFCHSYWFNNLPLKQYHAIVSNPPYIAENDPHLKQGDVR 203 Query: 189 DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN 248 F+P +L DGL+ + I +L DGL VE G+ QK ++ I ++ Sbjct: 204 -FEPTSALVSSQDGLADLQYIIQHSYEYLLPDGLLLVEHGFEQKNEISTILNQLGYKNIH 262 Query: 249 AFKDYGGNDRV 259 ++D G+DRV Sbjct: 263 CWQDLQGHDRV 273 >gi|315613126|ref|ZP_07888036.1| protein-(glutamine-N5) methyltransferase [Streptococcus sanguinis ATCC 49296] gi|315314688|gb|EFU62730.1| protein-(glutamine-N5) methyltransferase [Streptococcus sanguinis ATCC 49296] Length = 278 Score = 119 bits (299), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 76/217 (35%), Positives = 114/217 (52%), Gaps = 12/217 (5%) Query: 48 HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTG 107 H+ I+G DF+ ++L + PRPETE LV+ LA + + +++LD+GTG Sbjct: 65 HKPAQYIVGHADFFGMQLKVDERVLIPRPETEELVELILAEN-----PEENLKVLDIGTG 119 Query: 108 TGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDV 167 +GA+ L L K P + DIS AL++A NA ++ F +SD F+ + +D+ Sbjct: 120 SGAIALGLAKNRPDWSVTAADISKDALQLASENARNQNLNIFFK--KSDCFAEISEKYDI 177 Query: 168 IVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227 IVSNPPYI +GL V +P ++L DGL+ YR IA+ +L G +EI Sbjct: 178 IVSNPPYISREDESEVGLNVLHSEPHLALFADEDGLAIYRRIAEDAKDYLTDGGKIYLEI 237 Query: 228 GYNQKVDVVRIFESRKLF---LVNAFKDYGGNDRVLL 261 GY Q V +F RK + KD G DR+++ Sbjct: 238 GYKQGQSVPALF--RKYLPEKRIRTLKDQFGQDRMVV 272 >gi|229519156|ref|ZP_04408599.1| methylase of polypeptide chain release factors [Vibrio cholerae RC9] gi|229343845|gb|EEO08820.1| methylase of polypeptide chain release factors [Vibrio cholerae RC9] Length = 286 Score = 119 bits (299), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 87/258 (33%), Positives = 126/258 (48%), Gaps = 13/258 (5%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ LC V ++ PD +L+ L + R E + ILG R+F+++ L Sbjct: 27 DAAVLLCHVLAKPRSYLLTWPDKILEKPTLASLELLLARRRAGEPMAYILGEREFWSLPL 86 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV--RILDLGTGTGAVCLALLKESPFFK 123 +S T PRP+TE LV+ AL +K ++ +LDLGTGTGA+ LAL E P + Sbjct: 87 KVSPSTLIPRPDTERLVELAL-------DKAALIDGELLDLGTGTGAIALALASELPTRQ 139 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIESVIVD 181 G+D+ +A E+A+ NA + Q WFS + F +IVSNPPYIE Sbjct: 140 VTGIDLRPEAAELARENATRLAI-HNAQFFQGSWFSPLADGTKFALIVSNPPYIEENDPH 198 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P+ +L +GL+ R I+ L G E GY+Q V V I Sbjct: 199 LSLGDVR-FEPKSALVAAENGLADIRHISTHAPHFLLDGGWLLFEHGYDQGVAVRTILRD 257 Query: 242 RKLFLVNAFKDYGGNDRV 259 + +DY G+DRV Sbjct: 258 LGYQNIITEQDYAGHDRV 275 >gi|260772291|ref|ZP_05881207.1| Polypeptide chain release factor methylase [Vibrio metschnikovii CIP 69.14] gi|260611430|gb|EEX36633.1| Polypeptide chain release factor methylase [Vibrio metschnikovii CIP 69.14] Length = 280 Score = 119 bits (299), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 92/264 (34%), Positives = 129/264 (48%), Gaps = 14/264 (5%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ LC V ++ PD LD + R + E I I+G R+F+++ L Sbjct: 25 DAALLLCHVLQKPRSYLLTWPDKRLDADAISAFEVLLARRIAGEPIAYIIGEREFWSLPL 84 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR--ILDLGTGTGAVCLALLKESPFFK 123 ++ T PRP+TE LV+ AL +K ++ ILDLGTGTGA+ LAL E P Sbjct: 85 KVAPSTLIPRPDTERLVELAL-------DKAVLIDGDILDLGTGTGAIALALASELPQRH 137 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVD 181 +G+D+ +A+E+A+ N +S LQ WF+ + F +I SNPPYIE Sbjct: 138 VLGIDLRSEAVELAEDNRKRLQLSN-VTFLQGSWFTPLANGIKFALIASNPPYIEEHDPH 196 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+PR +L G +GL+ + IA +L G E GY Q V I Sbjct: 197 LQQGDVR-FEPRSALVAGDNGLADIKHIATSAREYLLDRGWLLFEHGYQQGKAVRAILSE 255 Query: 242 RKLFLVNAFKDYGGNDRVLL-FCR 264 V +DY GNDRV L CR Sbjct: 256 LGYQQVVTEQDYAGNDRVTLGQCR 279 >gi|56417124|ref|YP_154198.1| protein-(glutamine-N5) methyltransferase [Anaplasma marginale str. St. Maries] gi|222475489|ref|YP_002563906.1| protein-(glutamine-N5) methyltransferase [Anaplasma marginale str. Florida] gi|255003477|ref|ZP_05278441.1| protein-(glutamine-N5) methyltransferase [Anaplasma marginale str. Puerto Rico] gi|255004602|ref|ZP_05279403.1| protein-(glutamine-N5) methyltransferase [Anaplasma marginale str. Virginia] gi|56388356|gb|AAV86943.1| protein-(glutamine-N5) methyltransferase [Anaplasma marginale str. St. Maries] gi|222419627|gb|ACM49650.1| protein-(glutamine-N5) methyltransferase [Anaplasma marginale str. Florida] Length = 285 Score = 119 bits (298), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 78/228 (34%), Positives = 120/228 (52%), Gaps = 8/228 (3%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQ--RFFLTNAIVRSLKHESIHRILGWRDFYNV 63 D+ + G+S+ ++VD D ++ + RFF + R L E + ILG R+F+ + Sbjct: 28 DAELIAQQALGISAIAMLVDADMPVEQERADRFFAL--LDRRLSGEPVSHILGKREFWGM 85 Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 ++SD +PR +TE +V SA+ + + + R++ I DLGTGTG + +ALL Sbjct: 86 DFAVNSDVLDPRADTESVVSSAI--KIYKNQNRNLT-IADLGTGTGCILIALLSHYRHAT 142 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183 GV + S KA +A+ N V + + R + W EG FD+IVSNPPYI + L Sbjct: 143 GVAFEKSVKAYRVARQNFVRHSMLARVKLRCASW-ERCEGKFDLIVSNPPYIRRCKIPGL 201 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231 EVR +P +LDGG G+ Y I + + L G +EIG +Q Sbjct: 202 QREVRQHEPLGALDGGTRGMEAYTQIFKVLKKCLRPSGRAILEIGEDQ 249 >gi|107024141|ref|YP_622468.1| HemK family modification methylase [Burkholderia cenocepacia AU 1054] gi|116688533|ref|YP_834156.1| HemK family modification methylase [Burkholderia cenocepacia HI2424] gi|105894330|gb|ABF77495.1| [protein release factor]-glutamine N5-methyltransferase [Burkholderia cenocepacia AU 1054] gi|116646622|gb|ABK07263.1| [protein release factor]-glutamine N5-methyltransferase [Burkholderia cenocepacia HI2424] Length = 280 Score = 119 bits (298), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 85/262 (32%), Positives = 128/262 (48%), Gaps = 15/262 (5%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDR--QRFFLTNAIVRSLKHESIHRILGWRDFYNV 63 D+ L G + Q+I D+ LD +R+ A R + E + +++G R+F+ Sbjct: 19 DARVLLAHALGWTRTQLITRGDAPLDAAAVERYRALEA--RRVAGEPVAQLVGMREFFGR 76 Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 ++ D PRPETELLV++AL I+ +LDLGTG+GA+ +++ E P + Sbjct: 77 PFDVTPDVLIPRPETELLVEAALDA----IDGLPHAAVLDLGTGSGAIAVSIAAERPDAR 132 Query: 124 GVGVDISCKALEIAKSNAVTNGVSER----FDTLQSDWFSSVEGL--FDVIVSNPPYIES 177 +D S AL +A+ NA + R LQSDW+++++ FD IVSNPPYI Sbjct: 133 VWALDRSPAALAVAQRNADKLLDAHRPGGPLHWLQSDWYAALDPALGFDAIVSNPPYIAQ 192 Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237 ++R F+PR +L DGLS R I G +L G +E GY+Q V Sbjct: 193 HDPHLAQGDLR-FEPRGALTDDADGLSAIRAIVAGAGAYLKPGGTLWIEHGYDQAEAVRA 251 Query: 238 IFESRKLFLVNAFKDYGGNDRV 259 I S V + D +R Sbjct: 252 ILASHGFVAVESLADLAAIERT 273 >gi|331006966|ref|ZP_08330209.1| Methylase of polypeptide chain release factors [gamma proteobacterium IMCC1989] gi|330419228|gb|EGG93651.1| Methylase of polypeptide chain release factors [gamma proteobacterium IMCC1989] Length = 289 Score = 119 bits (298), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 76/237 (32%), Positives = 117/237 (49%), Gaps = 4/237 (1%) Query: 26 PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85 P+ +L Q+ + R L E I I+G ++F+++ L ++ T PRP+TE++V++A Sbjct: 51 PEKLLTVEQQTIFNQLMQRRLNGEPIAYIVGEKEFWSLALFVNESTLIPRPDTEVMVETA 110 Query: 86 LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145 L+ + E ++DLGTGTGA+ LAL E P + + D S A E+AK N + Sbjct: 111 LSLFVDD-EPEKQRSVVDLGTGTGAIALALASEKPCWDIIAADNSVAACELAKKNQQRHQ 169 Query: 146 VSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204 + L SDW +V+ D+IVSNPPYI +VR F+P +L +GL+ Sbjct: 170 L-HNVTVLCSDWLVAVDVADVDLIVSNPPYIHENDPHLFQGDVR-FEPHSALTAKNNGLA 227 Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 TI L G +E GY Q +V I + + L D G R+ + Sbjct: 228 DIETIVLQAKHVLRPSGWLLIEHGYQQSAEVKEILQKNQYTLCRTINDMAGQSRMTM 284 >gi|126642198|ref|YP_001085182.1| methyl transferase [Acinetobacter baumannii ATCC 17978] Length = 206 Score = 119 bits (298), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 75/210 (35%), Positives = 111/210 (52%), Gaps = 12/210 (5%) Query: 54 ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113 + G + F+ + L ++SDT PRP+TE+L+++ L +LP+ I+DLGTGTGA+ L Sbjct: 1 MTGSQPFWTLDLKVTSDTLVPRPDTEVLIETVLNLNLPK-----NANIVDLGTGTGAIAL 55 Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEG-LFDVIVSN 171 AL E P + DI L++AK NA T+G+ +F WF ++E FD+IVSN Sbjct: 56 ALASERPNWFVTATDIYAPTLDVAKENAQTHGLHHVKFAC--GAWFEALEPQQFDLIVSN 113 Query: 172 PPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231 PPYI+ + ++ +PR +L GL+ I L G ++E GY+Q Sbjct: 114 PPYIDP---EDEHMQALATEPRRALVADHHGLADIEIIIAQGKNWLKPQGWIALEHGYDQ 170 Query: 232 KVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 V IF + +DYG NDRV L Sbjct: 171 GQAVRGIFAEHGFSEIKTIQDYGQNDRVTL 200 >gi|78043637|ref|YP_361355.1| HemK family modification methylase [Carboxydothermus hydrogenoformans Z-2901] gi|77995752|gb|ABB14651.1| modification methylase, HemK family [Carboxydothermus hydrogenoformans Z-2901] Length = 285 Score = 119 bits (298), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 84/267 (31%), Positives = 137/267 (51%), Gaps = 12/267 (4%) Query: 1 MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60 M AL D+ L V G+S + P+ VL + + + + R + ++G ++F Sbjct: 23 MPAL-DAELLLAHVLGISRVAIYTRPERVLSEYEWERFVDHVERRASRIPLAYLIGKKEF 81 Query: 61 YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120 Y + ++ + PRPETEL+V+ + F + R + + D+GTG+GAV +AL P Sbjct: 82 YGLDFFVTPEVLIPRPETELMVEEGINFLR---QYRGLKLVADVGTGSGAVGVALACHIP 138 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-----EGLFDVIVSNPPYI 175 +DIS +AL++A+ NA +GV ER D + G F +I +N PYI Sbjct: 139 LGLFFLLDISEEALKVARVNAHHHGVDERVILGHGDLLEPLSKLDFSGKFSLITANLPYI 198 Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235 + + L EV+ +P+I+LDGG DGL YR + + L +DG+ +EI Q + Sbjct: 199 PTEELSTLMPEVQK-EPQIALDGGEDGLMLYRRLLPEAHKLLAEDGVMLLEIAPYQGKAI 257 Query: 236 VRIFESRKLFLVNAFKDYGGNDRVLLF 262 E+ KL+ V KD G+DR+++ Sbjct: 258 TA--EAEKLYRVEIKKDLAGHDRLVIL 282 >gi|169833726|ref|YP_001694465.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptococcus pneumoniae Hungary19A-6] gi|168996228|gb|ACA36840.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptococcus pneumoniae Hungary19A-6] Length = 279 Score = 119 bits (298), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 79/237 (33%), Positives = 120/237 (50%), Gaps = 12/237 (5%) Query: 28 SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALA 87 V + ++ F+ + + H+ I+G DFY + L + PRPETE LV+ L Sbjct: 46 EVTTEEEKQFVEDIYQQLAAHKPAQYIIGQADFYGMHLKVDERVLIPRPETEELVELILT 105 Query: 88 FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147 +L + +LD+GTG+GA+ LAL K P + D+S +ALE+A NA ++ Sbjct: 106 ENL-----ETNLSVLDIGTGSGAIALALAKNRPDWSVTAADVSQEALELASENASNQNLN 160 Query: 148 ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207 F +SD F+ + +D+IVSNPPYI +GL V +P ++L DGL+ Y Sbjct: 161 IFFK--KSDCFAEISEKYDIIVSNPPYISREDESEVGLNVLHSEPHLALFADEDGLAIYC 218 Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF---LVNAFKDYGGNDRVLL 261 IA+ +L G +EIGY Q V +F RK V KD G +R+++ Sbjct: 219 RIAEDAKDYLKDGGKIYLEIGYKQGQSVPELF--RKHLPEKKVRTLKDQFGQNRMVV 273 >gi|81428745|ref|YP_395745.1| putative protoporphyrinogen oxidase, HemK [Lactobacillus sakei subsp. sakei 23K] gi|78610387|emb|CAI55437.1| Putative protoporphyrinogen oxidase, HemK [Lactobacillus sakei subsp. sakei 23K] Length = 289 Score = 119 bits (298), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 77/214 (35%), Positives = 115/214 (53%), Gaps = 7/214 (3%) Query: 49 ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108 + ILG+ +FY ++ T PR ETE LV+ L S+ ++ R + ++LD+GTG+ Sbjct: 69 QPAQYILGYANFYGRDFKVTPATLIPRLETEELVEWVL--SVAPVKDRPL-KVLDVGTGS 125 Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDV 167 GA+ + L E P ++ VDIS A+ +A+ NA T G + D ++ D+ + V G FDV Sbjct: 126 GAIAITLACERPDWQVSAVDISPAAIAVAQQNAQTLGA--KVDFIEGDFLTPVMGQQFDV 183 Query: 168 IVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227 IVSNPPYI + V +P ++L +GL+ Y A V L DG +E Sbjct: 184 IVSNPPYIAEDERSVMDASVLKHEPDLALFAPNNGLAFYERFAQEVPAFLEPDGALFLEF 243 Query: 228 GYNQKVDVVRIFESR-KLFLVNAFKDYGGNDRVL 260 GY QK +VRIFE + LF + KD R++ Sbjct: 244 GYQQKEAIVRIFEQKDPLFSLEVQKDMANWSRMM 277 >gi|209918453|ref|YP_002292537.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli SE11] gi|209911712|dbj|BAG76786.1| putative methyltransferase [Escherichia coli SE11] gi|324017538|gb|EGB86757.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS 117-3] Length = 277 Score = 119 bits (298), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 91/258 (35%), Positives = 128/258 (49%), Gaps = 8/258 (3%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 RD+ L VTG ++ ++ L D Q L + R E I + G R+F+++ Sbjct: 22 RDAEILLEHVTGRGRTFILAFGETQLTDEQCQQLDALLTRRRDGEPIAHLTGVREFWSLP 81 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L +S T PRP+TE LV+ ALA LP RILDLGTGTGA+ LAL E P + Sbjct: 82 LFVSPATLIPRPDTECLVEQALA-RLP----EQPCRILDLGTGTGAIALALASERPDCEI 136 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183 + VD A+ + + NA + + LQSDWFS++ G F +IVSNPPYI+ Sbjct: 137 IAVDRMPDAVSLTQRNAQHLAI-KNIHILQSDWFSALAGQQFAMIVSNPPYIDEQDPHLQ 195 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 +VR F+P +L G++ I + L G +E G+ Q V + F Sbjct: 196 QGDVR-FEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFILAG 254 Query: 244 LFLVNAFKDYGGNDRVLL 261 V +DYG N+RV L Sbjct: 255 YHDVETCRDYGDNERVTL 272 >gi|218514634|ref|ZP_03511474.1| protoporphyrinogen oxidase (methyltransferase) protein [Rhizobium etli 8C-3] Length = 120 Score = 119 bits (298), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 55/118 (46%), Positives = 74/118 (62%) Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSH 205 + +RF +QS WF ++ G F IVSNPPYI S ++ L EV FDP +LDGG DGL Sbjct: 1 MQDRFHAVQSSWFENIRGSFHAIVSNPPYIASNVIHDLAPEVTKFDPVAALDGGPDGLDA 60 Query: 206 YRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFC 263 Y IA +R + DG+ +EIGY+Q+ DV IFE++ + + KDYG NDR L+F Sbjct: 61 YHAIAKDAARFMRPDGVLGLEIGYDQRNDVTAIFEAKGFRCLKSVKDYGQNDRALMFA 118 >gi|257467858|ref|ZP_05631954.1| methyltransferase [Fusobacterium ulcerans ATCC 49185] gi|317062147|ref|ZP_07926632.1| methyltransferase [Fusobacterium ulcerans ATCC 49185] gi|313687823|gb|EFS24658.1| methyltransferase [Fusobacterium ulcerans ATCC 49185] Length = 372 Score = 119 bits (298), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 74/220 (33%), Positives = 118/220 (53%), Gaps = 6/220 (2%) Query: 43 VRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRIL 102 +R + + +LG +FY + PR +TE+LV+ + + + ++L Sbjct: 151 LRGKNRKPLQYLLGEWEFYGYPFKVDERVLIPRSDTEILVEQCKII----LNELEAPKVL 206 Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162 D+GTG+GA+ ++L KE G DIS ALE+AK+N N + E ++SD FSS + Sbjct: 207 DIGTGSGAIAISLGKECAHSDITGADISEGALEVAKANGELNKI-ENVKFIKSDVFSSFK 265 Query: 163 GL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221 + FD+IVSNPPYI + L EV +++P +L +G Y I+ +LN+ G Sbjct: 266 DMKFDLIVSNPPYIPLEEYNELMPEVLNYEPSSALTDNGNGYYFYSKISKEACDYLNEGG 325 Query: 222 LCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 + E+GYNQ V + E +++ KDYGG DRV++ Sbjct: 326 FLAFEVGYNQAEVVKELMEENGFDVLSIVKDYGGIDRVVI 365 >gi|42521716|ref|NP_967096.1| HemK protein [Bdellovibrio bacteriovorus HD100] gi|39574246|emb|CAE77750.1| HemK protein [Bdellovibrio bacteriovorus HD100] Length = 293 Score = 119 bits (298), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 85/270 (31%), Positives = 140/270 (51%), Gaps = 22/270 (8%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L L Q+ + D + D + L + R E + I+G+RDF+N R Sbjct: 25 DAELLLAHGLKLERIQLYLRFDQPMKDEELAVLRELVRRRASGEPVAYIMGYRDFFNHRF 84 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 +++ PRPETE +V+ LA++ +K + ++DLG G+G + L+LLKE P K + Sbjct: 85 EVNNQVLIPRPETEHIVEDVLAWA---SDKEASLGLIDLGCGSGCIGLSLLKEYPNAKLI 141 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF------------DVIVSNPP 173 VD+ A+E+A+ NA + V++R L D +VE + DV+VSNPP Sbjct: 142 AVDLLPGAIEVAQRNAQSLDVADRVQFLNLD-AGNVEAIMSAYKDFTGQSSIDVLVSNPP 200 Query: 174 YIESVIVDCLGLE--VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231 YI S D +E V+ F+P +L GL+ + + + +L GL +E+G +Q Sbjct: 201 YIAS---DDPQVEENVKKFEPNSALYAEDSGLALLKGWSKAFAPYLKTPGLMLMEMGMSQ 257 Query: 232 KVDVVRIFESRKLF-LVNAFKDYGGNDRVL 260 + + +ES K+F ++ KD G+DRV+ Sbjct: 258 GPAMKQAYESLKIFNEISVIKDLSGHDRVI 287 >gi|304438486|ref|ZP_07398426.1| protein-(glutamine-N5) methyltransferase [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304368569|gb|EFM22254.1| protein-(glutamine-N5) methyltransferase [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 292 Score = 119 bits (298), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 82/259 (31%), Positives = 133/259 (51%), Gaps = 3/259 (1%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L V G + V D L+ + + + H I ILG R+F + Sbjct: 30 DAEVLLAAVLGRDRMYLYVHFDEPLEPAELATFRSYVKERGAHVPIAYILGRREFMGLAF 89 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEK-RDVVRILDLGTGTGAVCLALLKESPFFKG 124 ++ DT PRP+TE+L A+ R E +R D+GTGTGA+ L++L + + Sbjct: 90 RVTRDTLIPRPDTEILAQFAVDTLRARAEAGAGELRFADIGTGTGAIALSVLHHTEGTRA 149 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCL 183 VDIS A +A NA T G++ER + L D + + G + +I+SNPPYI S V L Sbjct: 150 DAVDISPAAAAVAAENAATLGLTERIEVLTGDLTAPLFGRSYAMILSNPPYIPSADVKTL 209 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR- 242 +V+ ++P ++LDGG DGL+ YR + L + G+ +VE+G ++ DV + + Sbjct: 210 MEDVQAYEPHLALDGGADGLAVYRCLLRDAPDLLTEGGVLAVEVGVHEATDVAALMAAHP 269 Query: 243 KLFLVNAFKDYGGNDRVLL 261 ++ +D G +RV++ Sbjct: 270 RIVRTKTLRDLAGIERVVV 288 >gi|148359877|ref|YP_001251084.1| protein methyltransferase HemK [Legionella pneumophila str. Corby] gi|296107927|ref|YP_003619628.1| HemK protein [Legionella pneumophila 2300/99 Alcoy] gi|148281650|gb|ABQ55738.1| protein methyltransferase HemK [Legionella pneumophila str. Corby] gi|295649829|gb|ADG25676.1| HemK protein [Legionella pneumophila 2300/99 Alcoy] Length = 287 Score = 119 bits (298), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 82/251 (32%), Positives = 128/251 (50%), Gaps = 7/251 (2%) Query: 10 FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69 LC V + + PD+++ Q I + + I I G R+F+++ L ++ Sbjct: 29 LLCHVLNKNRAYLFAHPDALVSPEQIETYLQMIKQRAEGLPIAYITGQREFWSLSLKVTP 88 Query: 70 DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129 + PR ETE LV+ AL I ++ V +L+LGTG+GA+ LAL KE P + D Sbjct: 89 NVLIPRHETERLVELALEL----IPDKENVSVLELGTGSGAIALALAKERPLWHIDACDF 144 Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVR 188 S +ALE+A+ NA T G++ + S WF+++ + IVSNPPYI +VR Sbjct: 145 SKEALELARYNAKTLGLN-NINFCHSYWFNNLPLKQYHAIVSNPPYIAENDPHLKKGDVR 203 Query: 189 DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN 248 F+P +L DGL+ + I +L DGL VE G+ QK ++ I ++ Sbjct: 204 -FEPTSALVSSQDGLADLQYIIQHSYEYLLPDGLLLVEHGFEQKNEISAILNQLGYKNIH 262 Query: 249 AFKDYGGNDRV 259 ++D G+DRV Sbjct: 263 CWQDLQGHDRV 273 >gi|168487486|ref|ZP_02711994.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptococcus pneumoniae CDC1087-00] gi|183569705|gb|EDT90233.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptococcus pneumoniae CDC1087-00] Length = 279 Score = 119 bits (298), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 79/237 (33%), Positives = 120/237 (50%), Gaps = 12/237 (5%) Query: 28 SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALA 87 V + ++ F+ + + H+ I+G DFY + L + PRPETE LV+ L Sbjct: 46 EVTTEEEKQFIEDIYQQLAAHKPAQYIIGQADFYGMHLKVDERVLIPRPETEELVELILT 105 Query: 88 FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147 +L + +LD+GTG+GA+ LAL K P + D+S +ALE+A NA ++ Sbjct: 106 ENL-----ETNLSVLDIGTGSGAIALALAKNRPDWSVTAADVSQEALELASENASDQNLN 160 Query: 148 ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207 F +SD F+ + +D+IVSNPPYI +GL V +P ++L DGL+ Y Sbjct: 161 IFFK--KSDCFAEISEKYDIIVSNPPYISREDESEVGLNVLHSEPHLALFADEDGLAIYC 218 Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF---LVNAFKDYGGNDRVLL 261 IA+ +L G +EIGY Q V +F RK V KD G +R+++ Sbjct: 219 RIAEDAKDYLKDGGKIYLEIGYKQGQSVPELF--RKHLPEKKVRTLKDQFGQNRMVV 273 >gi|94676905|ref|YP_588738.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] gi|94220055|gb|ABF14214.1| protein methyltranferase HemK [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] Length = 281 Score = 119 bits (298), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 84/261 (32%), Positives = 133/261 (50%), Gaps = 13/261 (4%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L ++ S ++ +++L+D Q L N + R L+ E I I+G +F+++ + Sbjct: 24 DAELLLGQIVSTSRAHILAFGNNLLNDNQYKQLENLLERRLRGEPIAYIIGEWEFWSLPI 83 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 +S DT PRP+TE LV+ AL LP K +LDLGTGTGA+ LAL E P ++ Sbjct: 84 RVSPDTIIPRPDTECLVEQALGLLLPIHAK-----VLDLGTGTGAITLALASERPSWQFT 138 Query: 126 GVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWF----SSVEGLFDVIVSNPPYIESVIV 180 GVD A+E+A NA G++ RF L WF S V + +I+SNPPY+++ Sbjct: 139 GVDNHPGAVELADINAARLGLNNVRF--LCGSWFEPLQSQVTPRYSLIISNPPYVDANDP 196 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 L V F+P+ +L +G++ I S +L G +E G+ Q +V + Sbjct: 197 HLNNLGVC-FEPKSALVADCNGIADLAAICCQASTYLQHKGWIILEHGWLQGKEVRTLLM 255 Query: 241 SRKLFLVNAFKDYGGNDRVLL 261 + DY ++RV + Sbjct: 256 KAGFIHIVTTHDYSNHERVTM 276 >gi|215486444|ref|YP_002328875.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli O127:H6 str. E2348/69] gi|312966452|ref|ZP_07780674.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli 2362-75] gi|215264516|emb|CAS08883.1| N5-glutamine methyltransferase, modifies release factors RF-1 and RF-2 [Escherichia coli O127:H6 str. E2348/69] gi|312288905|gb|EFR16803.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli 2362-75] Length = 277 Score = 119 bits (297), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 92/258 (35%), Positives = 128/258 (49%), Gaps = 8/258 (3%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 RD+ L VTG ++ ++ L D Q L + R E I + G R+F+++ Sbjct: 22 RDAEILLEHVTGKGRTFILAFGETQLTDEQCQQLDALLTRRRDGEPIAHLTGVREFWSLP 81 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L +S T PRP+TE LV+ ALA LP RILDLGTGTGA+ LAL E P + Sbjct: 82 LFVSPATLIPRPDTECLVEQALA-RLP----EQPCRILDLGTGTGAIALALASERPDCEI 136 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183 VD A+ +A+ NA + + LQSDWFS++ G F +IVSNPPYI+ Sbjct: 137 TAVDRMPDAVALAQRNAQHLTI-KNIHILQSDWFSALAGQQFAMIVSNPPYIDEQDPHLQ 195 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 +VR F+P +L G++ I + L G +E G+ Q V + F Sbjct: 196 QGDVR-FEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFILAG 254 Query: 244 LFLVNAFKDYGGNDRVLL 261 V +DYG N+RV L Sbjct: 255 YHDVETCRDYGDNERVTL 272 >gi|78212026|ref|YP_380805.1| HemK family modification methylase [Synechococcus sp. CC9605] gi|78196485|gb|ABB34250.1| modification methylase, HemK family [Synechococcus sp. CC9605] Length = 301 Score = 119 bits (297), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 78/246 (31%), Positives = 120/246 (48%), Gaps = 9/246 (3%) Query: 21 QVIVDPDSVLDDRQRFFLTNAIVRSLKHESI--HRILGWRDFYNVRLTLSSDTFEPRPET 78 ++++DP +D Q + + + H ++ ++G + +V L S PR ET Sbjct: 52 RLLLDPTRSVDLEQSLEMLSGLWERHLHGNVPLQHLVGLCPWRDVLLESSPAALIPRQET 111 Query: 79 ELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAK 138 ELLVD AL+ + + R DLGTG+GA+ +AL + P G GVD+S AL++A+ Sbjct: 112 ELLVDLALS----QFKATPPARWADLGTGSGAIAVALARAWPTAPGHGVDLSSDALQLAE 167 Query: 139 SNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195 N W+S ++ G D++VSNPPYI +VD L VRD +P ++ Sbjct: 168 RNLERCAPHHSCSLHLGSWWSPLKSWWGSLDLVVSNPPYIPGAVVDGLEAVVRDHEPHLA 227 Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGG 255 L GG DGL R + DG L+ G +E ++Q V+++ L A D G Sbjct: 228 LLGGADGLDAIRAVVDGAPTGLSPGGWLLLEHHHDQSAQVMQLLRDAGLVEGRAAADLEG 287 Query: 256 NDRVLL 261 R L Sbjct: 288 TLRFAL 293 >gi|289167969|ref|YP_003446238.1| protoporphyrinogen oxidase [Streptococcus mitis B6] gi|288907536|emb|CBJ22373.1| protoporphyrinogen oxidase [Streptococcus mitis B6] Length = 278 Score = 119 bits (297), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 84/262 (32%), Positives = 128/262 (48%), Gaps = 17/262 (6%) Query: 6 DSHSFLCR-VTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 +S SF+ R + LS + + + F+ + H+ I+G DFY ++ Sbjct: 22 ESLSFVYRSLKNLSFTDFVFALQQEVTKEEEVFVKGIFQQLAAHKPAQYIIGQTDFYGMQ 81 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L + PRPETE LV+ LA + + +++LD+GTG+GA+ L L K + Sbjct: 82 LKVDERVLIPRPETEELVELILAEN-----SEESLKVLDIGTGSGAIALVLAKNRAAWSV 136 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184 DIS +AL++A NA + F +SD F+ + +D+IVSNPPYI +G Sbjct: 137 TAADISQEALDLASENAKNQKFNIFFK--KSDCFAEIFEKYDIIVSNPPYISREDESEVG 194 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF----- 239 L V +P ++L DGL+ YR IA+ +L G +EIGY Q V +F Sbjct: 195 LNVLHSEPHLALFADEDGLAIYRRIAEDAKDYLKDGGKIYLEIGYKQGQSVPELFRKHLP 254 Query: 240 ESRKLFLVNAFKDYGGNDRVLL 261 E R V KD G DR+++ Sbjct: 255 EKR----VRTLKDQFGQDRMVV 272 >gi|90416953|ref|ZP_01224882.1| hemK protein [marine gamma proteobacterium HTCC2207] gi|90331300|gb|EAS46544.1| hemK protein [marine gamma proteobacterium HTCC2207] Length = 277 Score = 119 bits (297), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 83/259 (32%), Positives = 128/259 (49%), Gaps = 8/259 (3%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D LC V G++ + P+ + + R + E + ++G + F+++ L Sbjct: 23 DCELLLCFVLGVAPSYLKTWPERQVSGDHWAQFDALLQRRIAGEPVAYLIGSQGFWSLDL 82 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 +S T PRPETELLV+ AL +LP + +LDLGTGTGA+ LAL E ++ Sbjct: 83 EVSPATLIPRPETELLVEVALDLALP-----EQAAVLDLGTGTGAIALALASERNGWQIC 137 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLG 184 VD+ A+++A+ N ++ SDWF+++ FD+IVSNPPYIE+ Sbjct: 138 AVDLQQSAVDLAERNRQRYQLN-NVRLFASDWFAAIPVQRFDLIVSNPPYIEANDPHLTQ 196 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 +VR F+P +L G DGL R + +L G +E G++Q V + E Sbjct: 197 GDVR-FEPASALVSGDDGLDDLRLVCSQSVDYLADGGWLLLEHGFDQGAAVRELLERAGF 255 Query: 245 FLVNAFKDYGGNDRVLLFC 263 LV D G +R+ L C Sbjct: 256 TLVETRSDLNGCERITLGC 274 >gi|218893761|ref|YP_002442630.1| putative methyl transferase [Pseudomonas aeruginosa LESB58] gi|254238596|ref|ZP_04931919.1| hypothetical protein PACG_04751 [Pseudomonas aeruginosa C3719] gi|126170527|gb|EAZ56038.1| hypothetical protein PACG_04751 [Pseudomonas aeruginosa C3719] gi|218773989|emb|CAW29804.1| probable methyl transferase [Pseudomonas aeruginosa LESB58] Length = 276 Score = 119 bits (297), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 85/257 (33%), Positives = 130/257 (50%), Gaps = 8/257 (3%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L G + P+ ++ + I R E + ILG + F+++ L Sbjct: 22 DTELLLAAAMGKPRSFLRTWPERIVPREANERFDDWIARRRNGEPVAYILGHQGFWSLDL 81 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 ++ T PRP+TELLV++ALA D +LDLGTGTGA+ LAL E P + Sbjct: 82 EVAPHTLIPRPDTELLVETALATL-----AADTATVLDLGTGTGAIALALASERPLWTVT 136 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLG 184 VD +A+ +A+ N + E + +S WFS+++G F +IV NPPYI + Sbjct: 137 AVDRVEEAVALAERNR-QRLLLENVEVRRSHWFSALDGRRFRMIVGNPPYIPASDPHLSE 195 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 +VR F+P+ +L G DGL R I +HL +G +E GY+Q V + +R Sbjct: 196 GDVR-FEPKSALVAGSDGLDDIRQIVAQAPQHLLDEGWLLLEHGYDQGAAVRELLGARGF 254 Query: 245 FLVNAFKDYGGNDRVLL 261 V+ +D GGN+R+ L Sbjct: 255 AGVHTLRDLGGNERITL 271 >gi|70732475|ref|YP_262237.1| hemK protein [Pseudomonas fluorescens Pf-5] gi|68346774|gb|AAY94380.1| hemK protein [Pseudomonas fluorescens Pf-5] Length = 276 Score = 119 bits (297), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 81/240 (33%), Positives = 124/240 (51%), Gaps = 8/240 (3%) Query: 26 PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85 P+ ++ T+ + R E + ILG + F+ + L ++ T PRP+TELLV++A Sbjct: 42 PERIVPSEAALVFTDYLQRRRSGEPVAYILGQQGFWKLDLEVAPHTLIPRPDTELLVEAA 101 Query: 86 LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145 L +LDLGTG+GA+ LAL E P ++ VD +A+ +A+ N Sbjct: 102 LELL-----PATPATVLDLGTGSGAIALALASERPAWQVTAVDRVLEAVALAERNRQRLQ 156 Query: 146 VSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204 + + L S WFSS+E FD+I+SNPPYI + +VR F+P +L G DGL Sbjct: 157 L-DNVSVLSSHWFSSIESRRFDLIISNPPYIAEADPHLVAGDVR-FEPESALVAGKDGLD 214 Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 R I +HL G +E GY+Q V + ++ V++ D GG++R+ L CR Sbjct: 215 DLRLIVTQAPQHLEAGGWLMLEHGYDQAAAVRELLAAQGFIEVHSRVDLGGHERISLGCR 274 >gi|330752434|emb|CBL87384.1| modification methylase HemK [uncultured Flavobacteria bacterium] Length = 273 Score = 119 bits (297), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 77/248 (31%), Positives = 128/248 (51%), Gaps = 9/248 (3%) Query: 16 GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75 GL H+++++ D + + N + R KHE I +L F+ ++ ++SD PR Sbjct: 27 GLKPHELVLNYDKKVSSYDCDYFDNVLKRLKKHEPIQYVLEVAYFFGLKFFVNSDVLIPR 86 Query: 76 PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135 PETE L L + L I++ ++ILD+GTG+ + +AL K+ P K +D+S AL+ Sbjct: 87 PETEEL----LVWILKSIDRNKALKILDIGTGSACIAVALAKQFPNAKIYAMDVSADALK 142 Query: 136 IAKSNAVTNGVSERFDTLQSDWFSS--VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPR 193 +AK+NA N V+ F +++D F + + FDVIVSNPPY+ + V DF+P Sbjct: 143 VAKTNAKNNKVNINF--IEADIFRTKDLTSSFDVIVSNPPYVRQSEATEMASNVLDFEPA 200 Query: 194 ISL-DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKD 252 ++L L Y I + ++L+ G C +EI ++ +F+ + KD Sbjct: 201 LALFVNDNQPLMFYNAILKILLKNLSSGGFCFLEINEAFGSEIQALFDLKNFQNQQLKKD 260 Query: 253 YGGNDRVL 260 G DR+ Sbjct: 261 TFGKDRMF 268 >gi|320637364|gb|EFX07171.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli O157:H7 str. G5101] Length = 277 Score = 119 bits (297), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 91/258 (35%), Positives = 128/258 (49%), Gaps = 8/258 (3%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 RD+ L VTG ++ ++ L D Q L + R E I + G R+F+++ Sbjct: 22 RDAEILLEHVTGRGRTFILAFGETQLTDEQCQQLDALLTRRRDGEPIAHLTGVREFWSLP 81 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L +S T PRP+TE LV+ ALA LP RILDLGTGTGA+ LAL +E P + Sbjct: 82 LFVSPATLIPRPDTECLVEQALA-RLP----EQPCRILDLGTGTGAIALALARERPDCEI 136 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183 VD A+ +A+ NA + + LQSDWF ++ G F +IVSNPPYI+ Sbjct: 137 TAVDRMPDAVALAQRNAQHLAI-KNIHILQSDWFRALAGQQFAMIVSNPPYIDEQDPHLQ 195 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 +VR F+P +L G++ I + L G +E G+ Q V + F Sbjct: 196 QGDVR-FEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFILAG 254 Query: 244 LFLVNAFKDYGGNDRVLL 261 V +DYG N+RV L Sbjct: 255 YHDVETCRDYGDNERVTL 272 >gi|72383531|ref|YP_292886.1| modification methylase HemK [Prochlorococcus marinus str. NATL2A] gi|72003381|gb|AAZ59183.1| modification methylase HemK [Prochlorococcus marinus str. NATL2A] Length = 273 Score = 119 bits (297), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 80/213 (37%), Positives = 116/213 (54%), Gaps = 15/213 (7%) Query: 57 WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116 WRD V L +S++ PR ETE L+D AL +I D R DLGTG+GA+ ++L Sbjct: 69 WRD---VELEVSAEALIPRQETEFLIDIALK----KIINFDSGRWADLGTGSGAIAVSLA 121 Query: 117 KESPFFKGVGVDISCKALEIAKSN--AVTNGVSERFDTLQSDWFSSVE---GLFDVIVSN 171 K P + G DIS +ALE+AK N A+ + RF DW+ ++ G FD+++SN Sbjct: 122 KSLPNWNGYATDISNEALELAKRNLKAIVPNANVRFSL--GDWWEPLKRWRGRFDLVLSN 179 Query: 172 PPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231 PPYI S +V+ L V++ +P I+LDGG DG++ R I G L K G +E Y+Q Sbjct: 180 PPYIPSYLVEELEPVVKNHEPIIALDGGEDGMNASRKIILGALNGLAKGGWLILEHHYDQ 239 Query: 232 KVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 + ++ + V+ KD G R + CR Sbjct: 240 SEKITSFMKNIGMEEVSFEKDLSGIKRYAI-CR 271 >gi|124025122|ref|YP_001014238.1| putative protein methyltransferase [Prochlorococcus marinus str. NATL1A] gi|123960190|gb|ABM74973.1| putative protein methyltransferase [Prochlorococcus marinus str. NATL1A] Length = 273 Score = 119 bits (297), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 81/213 (38%), Positives = 116/213 (54%), Gaps = 15/213 (7%) Query: 57 WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116 WRD V L +S++ PR ETE L+D AL +I D R DLGTG+GA+ ++L Sbjct: 69 WRD---VELEVSAEALIPRQETEFLIDIALK----KITNFDSGRWADLGTGSGAIAVSLA 121 Query: 117 KESPFFKGVGVDISCKALEIAKSN--AVTNGVSERFDTLQSDWFSSVE---GLFDVIVSN 171 K P + G VDIS +ALE+AK N A+ + RF DW+ ++ G FD+++SN Sbjct: 122 KSLPNWNGHAVDISNEALELAKRNLKAIVPNANVRFSL--GDWWEPLKRWRGRFDLVLSN 179 Query: 172 PPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231 PPYI S +V+ L V++ +P I+LDGG DG++ R I G L K G +E Y+Q Sbjct: 180 PPYIPSDLVEELEPVVKNHEPIIALDGGEDGMNASRKIILGALNGLAKGGWLILEHHYDQ 239 Query: 232 KVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 + + + V+ KD G R + CR Sbjct: 240 SEKITSFMRNIGMEEVSFEKDISGIKRYAI-CR 271 >gi|254995297|ref|ZP_05277487.1| protein-(glutamine-N5) methyltransferase [Anaplasma marginale str. Mississippi] Length = 285 Score = 119 bits (297), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 78/228 (34%), Positives = 120/228 (52%), Gaps = 8/228 (3%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQ--RFFLTNAIVRSLKHESIHRILGWRDFYNV 63 D+ + G+S+ ++VD D ++ + RFF + R L E + ILG R+F+ + Sbjct: 28 DAELIAQQALGISAIAMLVDADMPVEQERADRFFAL--LDRRLSGEPVSHILGKREFWGM 85 Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 ++SD +PR +TE +V SA+ + + + R++ I DLGTGTG + +ALL Sbjct: 86 DFAVNSDVLDPRADTESVVSSAI--KIYKNQNRNLT-IADLGTGTGCILIALLSHYRQAT 142 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183 GV + S KA +A+ N V + + R + W EG FD+IVSNPPYI + L Sbjct: 143 GVAFEKSVKAYRVARQNFVRHSMLARVKLRCASW-ERCEGKFDLIVSNPPYIRRCKIPGL 201 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231 EVR +P +LDGG G+ Y I + + L G +EIG +Q Sbjct: 202 QREVRQHEPLGALDGGTRGMEAYTQIFKVLKKCLRPSGRAILEIGEDQ 249 >gi|107099669|ref|ZP_01363587.1| hypothetical protein PaerPA_01000687 [Pseudomonas aeruginosa PACS2] Length = 276 Score = 119 bits (297), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 85/257 (33%), Positives = 130/257 (50%), Gaps = 8/257 (3%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L G + P+ ++ + I R E + ILG + F+++ L Sbjct: 22 DTELLLAAAMGKPRSFLRTWPERIVPREANERFDDWIARRRNGEPVAYILGHQGFWSLDL 81 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 ++ T PRP+TELLV++ALA D +LDLGTGTGA+ LAL E P + Sbjct: 82 EVAPHTLIPRPDTELLVETALATL-----AADTATVLDLGTGTGAIALALASERPLWTVT 136 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLG 184 VD +A+ +A+ N + E + +S WFS+++G F +IV NPPYI + Sbjct: 137 AVDRVEEAVALAERNR-QRLLLENVEVRRSHWFSALDGRRFRMIVGNPPYIPASDPHLSE 195 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 +VR F+P+ +L G DGL R I +HL +G +E GY+Q V + +R Sbjct: 196 GDVR-FEPKSALVAGSDGLDDIRQIVAQAPQHLLDEGWLLLEHGYDQGAAVRELLGARGF 254 Query: 245 FLVNAFKDYGGNDRVLL 261 V+ +D GGN+R+ L Sbjct: 255 AGVHTLRDLGGNERITL 271 >gi|148994242|ref|ZP_01823535.1| serine hydroxymethyltransferase [Streptococcus pneumoniae SP9-BS68] gi|148998843|ref|ZP_01826279.1| HemK protein [Streptococcus pneumoniae SP11-BS70] gi|168488842|ref|ZP_02713041.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptococcus pneumoniae SP195] gi|168494450|ref|ZP_02718593.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptococcus pneumoniae CDC3059-06] gi|221231774|ref|YP_002510926.1| methyltransferase [Streptococcus pneumoniae ATCC 700669] gi|225854522|ref|YP_002736034.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptococcus pneumoniae JJA] gi|225861004|ref|YP_002742513.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptococcus pneumoniae Taiwan19F-14] gi|298230459|ref|ZP_06964140.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptococcus pneumoniae str. Canada MDR_19F] gi|298255329|ref|ZP_06978915.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptococcus pneumoniae str. Canada MDR_19A] gi|298502959|ref|YP_003724899.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Streptococcus pneumoniae TCH8431/19A] gi|307067802|ref|YP_003876768.1| methylase of polypeptide chain release factors [Streptococcus pneumoniae AP200] gi|147755270|gb|EDK62321.1| HemK protein [Streptococcus pneumoniae SP11-BS70] gi|147927383|gb|EDK78414.1| serine hydroxymethyltransferase [Streptococcus pneumoniae SP9-BS68] gi|183572386|gb|EDT92914.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptococcus pneumoniae SP195] gi|183575598|gb|EDT96126.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptococcus pneumoniae CDC3059-06] gi|220674234|emb|CAR68769.1| putative methyltransferase [Streptococcus pneumoniae ATCC 700669] gi|225724246|gb|ACO20099.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptococcus pneumoniae JJA] gi|225727908|gb|ACO23759.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptococcus pneumoniae Taiwan19F-14] gi|298238554|gb|ADI69685.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Streptococcus pneumoniae TCH8431/19A] gi|301794157|emb|CBW36567.1| putative methyltransferase [Streptococcus pneumoniae INV104] gi|306409339|gb|ADM84766.1| Methylase of polypeptide chain release factors [Streptococcus pneumoniae AP200] gi|327389395|gb|EGE87740.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptococcus pneumoniae GA04375] gi|332073353|gb|EGI83832.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptococcus pneumoniae GA17570] gi|332075369|gb|EGI85838.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptococcus pneumoniae GA41301] gi|332201492|gb|EGJ15562.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptococcus pneumoniae GA47368] Length = 279 Score = 119 bits (297), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 79/237 (33%), Positives = 120/237 (50%), Gaps = 12/237 (5%) Query: 28 SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALA 87 V + ++ F+ + + H+ I+G DFY + L + PRPETE LV+ L Sbjct: 46 EVTTEEEKQFVEDIYQQLAAHKPAQYIIGQADFYGMHLKVDERVLIPRPETEELVELILT 105 Query: 88 FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147 +L + +LD+GTG+GA+ LAL K P + D+S +ALE+A NA ++ Sbjct: 106 ENL-----ETNLSVLDIGTGSGAIALALAKNRPDWSVTAADVSQEALELASENASDQNLN 160 Query: 148 ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207 F +SD F+ + +D+IVSNPPYI +GL V +P ++L DGL+ Y Sbjct: 161 IFFK--KSDCFAEISEKYDIIVSNPPYISREDESEVGLNVLHSEPHLALFADEDGLAIYC 218 Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF---LVNAFKDYGGNDRVLL 261 IA+ +L G +EIGY Q V +F RK V KD G +R+++ Sbjct: 219 RIAEDAKDYLKDGGKIYLEIGYKQGQSVPELF--RKHLPEKKVRTLKDQFGQNRMVV 273 >gi|33860876|ref|NP_892437.1| putative protein methyltransferase [Prochlorococcus marinus subsp. pastoris str. CCMP1986] gi|33633818|emb|CAE18777.1| putative protein methyltransferase [Prochlorococcus marinus subsp. pastoris str. CCMP1986] Length = 289 Score = 119 bits (297), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 66/202 (32%), Positives = 104/202 (51%), Gaps = 9/202 (4%) Query: 57 WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116 WR N++L +S+ PRPETEL++D + EK + +DLGTG+GA+ +AL Sbjct: 84 WR---NLKLEVSNRVLIPRPETELIIDIISGIFKNKEEK---ITFVDLGTGSGAISIALA 137 Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF---SSVEGLFDVIVSNPP 173 E+P + G+ DI A++IA N T +W+ + +G D VSNPP Sbjct: 138 LENPNWNGIATDIDKNAIKIASRNFATYSNQSNLKFYNGNWWDPLKNFKGEIDFAVSNPP 197 Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233 YI + L +EV++F+P+++L GG +GL H I +L G +E ++Q Sbjct: 198 YIPQDTYEVLPIEVKNFEPKLALLGGQEGLDHINQIVQNAPLYLKNKGWLLIENHFDQGE 257 Query: 234 DVVRIFESRKLFLVNAFKDYGG 255 V ++F + V KD+ G Sbjct: 258 KVKKLFLENRFTSVKVLKDFSG 279 >gi|293433528|ref|ZP_06661956.1| protein-(glutamine-N5) methyltransferase [Escherichia coli B088] gi|291324347|gb|EFE63769.1| protein-(glutamine-N5) methyltransferase [Escherichia coli B088] Length = 277 Score = 119 bits (297), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 91/258 (35%), Positives = 128/258 (49%), Gaps = 8/258 (3%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 RD+ L VTG ++ ++ L D Q L + R E I + G R+F+++ Sbjct: 22 RDAEILLEYVTGRGRTFILAFGETQLTDEQCQQLDALLTRRRDGEPIAHLTGVREFWSLP 81 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L +S T PRP+TE LV+ ALA LP RILDLGTGTGA+ LAL E P + Sbjct: 82 LFVSPATLIPRPDTECLVEQALA-RLP----EQPCRILDLGTGTGAIALALASERPDCEI 136 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183 + VD A+ + + NA + + LQSDWFS++ G F +IVSNPPYI+ Sbjct: 137 IAVDRMPDAVSLTQRNAQHLAI-KNIHILQSDWFSALAGQQFAMIVSNPPYIDEQDPHLQ 195 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 +VR F+P +L G++ I + L G +E G+ Q V + F Sbjct: 196 QGDVR-FEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFILAG 254 Query: 244 LFLVNAFKDYGGNDRVLL 261 V +DYG N+RV L Sbjct: 255 YHDVETCRDYGDNERVTL 272 >gi|331682701|ref|ZP_08383320.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli H299] gi|331080332|gb|EGI51511.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli H299] Length = 277 Score = 118 bits (296), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 92/258 (35%), Positives = 128/258 (49%), Gaps = 8/258 (3%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 RD+ L VTG ++ ++ L D Q L + R E I + G R+F+++ Sbjct: 22 RDAEILLEHVTGRGRTFILAFGETQLTDEQCQQLDALLTRRRDGEPIAHLTGVREFWSLP 81 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L +S T PRP+TE LV+ ALA LP RILDLGTGTGA+ LAL E P + Sbjct: 82 LFVSPATLIPRPDTECLVEQALA-RLP----EQPCRILDLGTGTGAIALALACERPDCEI 136 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183 VD A+ +A+ NA + + LQSDWFS++ G F +IVSNPPYI+ Sbjct: 137 TAVDRMPDAVSLAQRNAQHLAI-KNIHILQSDWFSALAGQQFAMIVSNPPYIDDQDPHLQ 195 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 +VR F+P +L G++ I + L G +E G+ Q V + F Sbjct: 196 QGDVR-FEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFILAG 254 Query: 244 LFLVNAFKDYGGNDRVLL 261 V +DYG N+RV L Sbjct: 255 YHDVETCRDYGDNERVTL 272 >gi|221068958|ref|ZP_03545063.1| modification methylase, HemK family [Comamonas testosteroni KF-1] gi|220713981|gb|EED69349.1| modification methylase, HemK family [Comamonas testosteroni KF-1] Length = 291 Score = 118 bits (296), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 79/242 (32%), Positives = 119/242 (49%), Gaps = 12/242 (4%) Query: 25 DPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDS 84 D D++ ++Q+ + +R + + + G ++FY + L + S +PRP+TE LVD Sbjct: 56 DSDALSQEQQQRWGQLCALRQ-QGMPVAYLTGSKEFYGLDLAVDSRVLDPRPDTETLVDW 114 Query: 85 ALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN 144 AL I + VR++DLGTG+GA+ LAL + P + + VD S AL +A+SNA Sbjct: 115 ALEL----IPEGQPVRVVDLGTGSGAIALALQSQRPSARVIAVDASADALAVARSNAARL 170 Query: 145 GVSERFDTLQSDWFSSVEGL--FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202 + + W ++GL D+IVSNPPYI + D L +P +L G DG Sbjct: 171 QLPVQL--AHGSWLEPLDGLEPVDLIVSNPPYIRA---DDPHLAALTHEPLSALASGADG 225 Query: 203 LSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262 L R+I D L G E G++Q DV R+ ++ V D G R Sbjct: 226 LEDIRSIIDQAPARLKDGGWLLFEHGWDQAEDVARLMQAAGFEQVQHRHDLAGIARCTGA 285 Query: 263 CR 264 CR Sbjct: 286 CR 287 >gi|148988473|ref|ZP_01819920.1| HemK protein [Streptococcus pneumoniae SP6-BS73] gi|147926154|gb|EDK77228.1| HemK protein [Streptococcus pneumoniae SP6-BS73] Length = 279 Score = 118 bits (296), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 78/239 (32%), Positives = 120/239 (50%), Gaps = 16/239 (6%) Query: 28 SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALA 87 V + ++ F+ + + H+ I+G DFY + L + PRPETE LV+ L Sbjct: 46 EVTTEEEKQFVEDIYQQLAAHKPAQYIIGQADFYGMHLKVDERVLIPRPETEELVELILT 105 Query: 88 FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147 +L + +LD+GTG+GA+ LAL K P + D+S +ALE+A NA ++ Sbjct: 106 ENL-----ETNLSVLDIGTGSGAIALALAKNRPDWSVTAADVSQEALELASENASNQNLN 160 Query: 148 ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207 F +SD F+ + +D+IVSNPPYI +GL V +P +++ DGL+ Y Sbjct: 161 IFFK--KSDCFAEISEKYDIIVSNPPYISREDESEVGLNVLHSEPHLAIFADEDGLAIYC 218 Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF-----ESRKLFLVNAFKDYGGNDRVLL 261 IA+ +L G +EIGY Q V +F E R V KD G +R+++ Sbjct: 219 RIAEDAKDYLKDGGKIYLEIGYKQGQSVPELFRKHLPEKR----VRTLKDQFGQNRMVV 273 >gi|313896051|ref|ZP_07829605.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Selenomonas sp. oral taxon 137 str. F0430] gi|312975476|gb|EFR40937.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Selenomonas sp. oral taxon 137 str. F0430] Length = 295 Score = 118 bits (296), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 85/260 (32%), Positives = 132/260 (50%), Gaps = 5/260 (1%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L V G + V D L+ + + + H + +LG R+F + Sbjct: 31 DAEVLLAAVLGKDRMYLYVHFDEPLEPAELSTFRSYVKERGAHTPMAYVLGRREFMGLEF 90 Query: 66 TLSSDTFEPRPETELLVDSALAF-SLPRIEKRDVVRILDLGTGTGAVCLALLKESPF--F 122 ++ DT PRP+TE+LV +A+ F R D + I DLGTGTGA+ L++L + Sbjct: 91 CVTRDTLIPRPDTEILVQTAVDFLRARRAAGADAMSIADLGTGTGAIALSVLYHADVSDL 150 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181 + VDIS A +A+ NA G++ER + D + + G +D+IVSNPPYI + + Sbjct: 151 RADAVDISPGAAAVARENAAQLGLAERCSVREGDLLAPLAGRTYDMIVSNPPYIPAGDIA 210 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 L +VR ++P ++LDGG DGL YR + L + G +VE+G Q DV + E Sbjct: 211 ELMTDVRAYEPHLALDGGADGLDFYRRMMADAPAMLKEGGAIAVEVGIGQAADVAALAER 270 Query: 242 R-KLFLVNAFKDYGGNDRVL 260 ++ KD G +RV+ Sbjct: 271 HPRIVRTETKKDLAGIERVV 290 >gi|254557154|ref|YP_003063571.1| protoporphyrinogen oxidase (putative) [Lactobacillus plantarum JDM1] gi|254046081|gb|ACT62874.1| protoporphyrinogen oxidase (putative) [Lactobacillus plantarum JDM1] Length = 288 Score = 118 bits (296), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 78/223 (34%), Positives = 116/223 (52%), Gaps = 8/223 (3%) Query: 40 NAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV 99 I R + E + +LG FY + L + PR ETE LVD + L + V Sbjct: 63 QGIDRVVAGEPVQYVLGDAPFYGLTLQVDPAVLIPRVETEELVD----WILTDVPATAPV 118 Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+LD+GTG+GA+ LA+ E P ++ DIS AL++AK+NA + + + SD + Sbjct: 119 RLLDVGTGSGAIALAIKHERPAWEITASDISTAALQVAKANA--DRLHLDVKLVHSDLLT 176 Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 SV FD+IVSNPPYI + D + V +P+ +L DGL+ Y +A V+ HL Sbjct: 177 SVSAQPFDIIVSNPPYIAASEKDVMDASVLAHEPQTALFADHDGLALYEQLATTVADHLT 236 Query: 219 KDGLCSVEIGYNQKVDVVRIF-ESRKLFLVNAFKDYGGNDRVL 260 G +E GY+Q + +F +S V +D G+DR+L Sbjct: 237 STGRLYLEFGYHQGPALQTLFAQSMPDATVTLRQDMAGHDRML 279 >gi|194434244|ref|ZP_03066510.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Shigella dysenteriae 1012] gi|194417475|gb|EDX33578.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Shigella dysenteriae 1012] gi|332092252|gb|EGI97329.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Shigella boydii 5216-82] gi|332098227|gb|EGJ03200.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Shigella dysenteriae 155-74] Length = 277 Score = 118 bits (296), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 91/258 (35%), Positives = 127/258 (49%), Gaps = 8/258 (3%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 RD+ L VTG V+ ++ L D Q L + R E + + G R+F+++ Sbjct: 22 RDAEILLEYVTGRGRTFVLAFGETQLTDEQLQQLDALLARRRTGEPVAHLTGQREFWSLP 81 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L +S T PRP+TE LV+ AL LP RILDLGTGTGA+ LAL E P + Sbjct: 82 LFVSPATLIPRPDTECLVEQALE-RLP----EQPCRILDLGTGTGAIALALASERPDCEI 136 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183 VD A+ +A+ NA + + LQSDWFS++ G F +IVSNPPYI+ Sbjct: 137 TAVDRMPDAVALAQRNAQHLAI-KNIHILQSDWFSALAGQQFAMIVSNPPYIDEQDPHLQ 195 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 +VR F+P +L G++ I + L G +E G+ Q V + F Sbjct: 196 QGDVR-FEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFILAG 254 Query: 244 LFLVNAFKDYGGNDRVLL 261 V +DYG N+RV L Sbjct: 255 YHDVETCRDYGDNERVTL 272 >gi|95929012|ref|ZP_01311757.1| modification methylase, HemK family [Desulfuromonas acetoxidans DSM 684] gi|95134913|gb|EAT16567.1| modification methylase, HemK family [Desulfuromonas acetoxidans DSM 684] Length = 293 Score = 118 bits (296), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 76/234 (32%), Positives = 116/234 (49%), Gaps = 2/234 (0%) Query: 27 DSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL 86 D L ++ + + R K E + I+G +F+++ ++ PR +TE+LV+ AL Sbjct: 50 DQPLQPQELTKIRQLVARRAKREPLQYIVGHTEFWSLPFKVAPGVLIPRGDTEILVEEAL 109 Query: 87 AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146 + V LD+GTG+GA+ +AL P + VD+ +AL A++NA NGV Sbjct: 110 RLLEDNTTSQQPV--LDVGTGSGAIAVALAHSCPDLQVEAVDLQPEALAQAQANAELNGV 167 Query: 147 SERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206 +ER Q D G + ++VSNPPYI +D L EVR+ +P ++L G DGL Y Sbjct: 168 AERLSFRQQDMAVLSGGPYRLVVSNPPYIREDEMDGLMPEVREHEPAVALQAGSDGLDCY 227 Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 R + + L G VE+G Q DV + L +DY G RV+ Sbjct: 228 RLLCEQALNLLIPGGWLLVEVGAGQADDVAALMVRHGLPETFQREDYNGIVRVV 281 >gi|167745422|ref|ZP_02417549.1| hypothetical protein ANACAC_00113 [Anaerostipes caccae DSM 14662] gi|167655143|gb|EDR99272.1| hypothetical protein ANACAC_00113 [Anaerostipes caccae DSM 14662] Length = 278 Score = 118 bits (296), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 75/213 (35%), Positives = 113/213 (53%), Gaps = 12/213 (5%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110 + ++G +DF ++ D PR +TE ++++ + + P ILD+ TG+G Sbjct: 72 LQYLIGTQDFMGYTFRVTPDVLIPRQDTESVIEAVVEGNYPH------ESILDVCTGSGC 125 Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170 + ++L +G DI KAL+IAK N +F +SD FS V+G FD+I+S Sbjct: 126 IAISLCLMLKPDVCIGTDIDEKALKIAKENGRRLAPMVKFK--KSDLFSGVDGCFDLIIS 183 Query: 171 NPPYIESVIVDCLGL--EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228 NPPYI + DC+ L EV+D +P ++LDG DGL YR +A +HLN G EIG Sbjct: 184 NPPYIPTK--DCMELMPEVKDHEPMLALDGREDGLYFYRKLAGTAPKHLNAGGTLVFEIG 241 Query: 229 YNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 Y+Q V + E V KD G DR+++ Sbjct: 242 YDQGAAVKTMMEEAGFSSVEIKKDLAGLDRMVI 274 >gi|311279354|ref|YP_003941585.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Enterobacter cloacae SCF1] gi|308748549|gb|ADO48301.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Enterobacter cloacae SCF1] Length = 278 Score = 118 bits (296), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 92/258 (35%), Positives = 135/258 (52%), Gaps = 8/258 (3%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 RD+ L VTG S ++ ++ L Q L + R + E + ++G R+F+++ Sbjct: 22 RDAEILLGHVTGKSRTFILAFDETPLSAEQLDALAGLLARRARGEPVAHLVGMREFWSLP 81 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L +S T PRP+TE LV+ ALA R+ RILDLGTGTGA+ LAL E P + Sbjct: 82 LFVSPATLIPRPDTECLVEQALA----RLGDAP-GRILDLGTGTGAIALALASERPDCQL 136 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCL 183 VD+ A+ +A+ N GV+ LQS WFS+++G FD+IVSNPPYI+ Sbjct: 137 TAVDVVADAVALARRNVAHLGVNN-VQVLQSSWFSALDGQRFDMIVSNPPYIDEQDPHLA 195 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 +VR F+P+ +L GL+ I +L+ G +E G+ Q V +F Sbjct: 196 QGDVR-FEPKTALVAADAGLADLAHIIAQGRCYLSAGGWMLLEHGWQQGAAVRALFADAG 254 Query: 244 LFLVNAFKDYGGNDRVLL 261 V +DYGGN+R+ L Sbjct: 255 YREVETCRDYGGNERLTL 272 >gi|255280025|ref|ZP_05344580.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bryantella formatexigens DSM 14469] gi|255269116|gb|EET62321.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bryantella formatexigens DSM 14469] Length = 307 Score = 118 bits (296), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 79/221 (35%), Positives = 110/221 (49%), Gaps = 13/221 (5%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR--DVV 99 I R +H + + G ++F ++S PR +TELLV A EKR Sbjct: 93 IGRRAQHVPVQYLTGVQEFMGYPFRVNSQVLIPRQDTELLVLEA--------EKRIHPGA 144 Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+LD+ TG+G + ++L K + DIS AL +A+ NA V F ++SD F Sbjct: 145 RVLDMCTGSGCIIISLAKRN-HICAAAADISEGALAVARENAGALQVEAEF--IKSDLFE 201 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 ++ G +D IVSNPPYI S + L EVRD++PR +LDG DGL YR I + L Sbjct: 202 NIAGTYDCIVSNPPYIASGEIPGLMPEVRDYEPRTALDGKADGLYFYRRIVAQAKQFLKP 261 Query: 220 DGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 G EIG +Q V +FE + KD G RV+ Sbjct: 262 QGWLLCEIGCDQGAAVAALFEQEGYREIEVKKDLAGLFRVV 302 >gi|59802323|ref|YP_209035.1| hypothetical protein NGO2015 [Neisseria gonorrhoeae FA 1090] gi|59719218|gb|AAW90623.1| putative protoporphyrinogen oxidase [Neisseria gonorrhoeae FA 1090] Length = 285 Score = 118 bits (296), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 84/221 (38%), Positives = 113/221 (51%), Gaps = 12/221 (5%) Query: 44 RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103 R L E + ILG R+FY R T++ + PRPETE LV++ LA LP + R+ D Sbjct: 66 RRLNGEPVAYILGVREFYGRRFTVNPNVLIPRPETEHLVEAVLA-RLP-----ENGRVWD 119 Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS--- 160 LGTG+GAV + + E P DIS ALE A+ NA G R + WF + Sbjct: 120 LGTGSGAVAVTVALERPDAFVRASDISTPALETARKNAADLGA--RVEFAHGSWFDTDMP 177 Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220 E +D+IVSNPPYIE+ ++R F+P+I+L DGLS RT+A G L + Sbjct: 178 SERQWDIIVSNPPYIENGDKHLSQGDLR-FEPQIALTDFSDGLSCIRTLAQGAPDRLAEG 236 Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 G +E G++Q V + V D G DRV L Sbjct: 237 GFLLLEHGFDQGAAVRGVLAENGFSGVEILPDLAGLDRVTL 277 >gi|331701219|ref|YP_004398178.1| protein-(glutamine-N5) methyltransferase [Lactobacillus buchneri NRRL B-30929] gi|329128562|gb|AEB73115.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Lactobacillus buchneri NRRL B-30929] Length = 282 Score = 118 bits (295), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 73/232 (31%), Positives = 122/232 (52%), Gaps = 7/232 (3%) Query: 10 FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69 L ++ +S+ +++ + + +Q +AI + LK ++G DFY + L ++ Sbjct: 34 LLEKLFKMSAADLLIHYHTQMPVKQWRVFQDAIGQLLKGVPPQYVVGEADFYGLSLKVTP 93 Query: 70 DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129 PR ETE LVD LA + +++LD+GTG+GA+ +AL P ++ DI Sbjct: 94 AVLIPRVETEELVDWILADN-----SDSKLKVLDIGTGSGAIAIALKHARPHWQVFASDI 148 Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRD 189 S A+++A+ NA+ N + F + SD F++++ FDVIVSNPPYI + V Sbjct: 149 SLPAIKVARQNAIANHTAIHF--MVSDVFAAIDESFDVIVSNPPYIAKDEQSYMDASVIK 206 Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +P ++L GL+ Y+ IA HL G +EIG+ Q+ V IF++ Sbjct: 207 SEPDLALYAKDQGLAIYKQIAADAESHLTSKGRLYLEIGFQQQSAVTEIFQA 258 >gi|194099711|ref|YP_002002846.1| HemK [Neisseria gonorrhoeae NCCP11945] gi|254492740|ref|ZP_05105911.1| hemK protein [Neisseria gonorrhoeae 1291] gi|268597897|ref|ZP_06132064.1| hemK protein [Neisseria gonorrhoeae FA19] gi|268600147|ref|ZP_06134314.1| hemK protein [Neisseria gonorrhoeae MS11] gi|268602560|ref|ZP_06136727.1| hemK protein [Neisseria gonorrhoeae PID1] gi|268681109|ref|ZP_06147971.1| hemK protein [Neisseria gonorrhoeae PID332] gi|268685212|ref|ZP_06152074.1| hemK protein [Neisseria gonorrhoeae SK-92-679] gi|268685589|ref|ZP_06152451.1| hemK protein [Neisseria gonorrhoeae SK-93-1035] gi|291044872|ref|ZP_06570581.1| protein methyltransferase hemK [Neisseria gonorrhoeae DGI2] gi|293397950|ref|ZP_06642156.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Neisseria gonorrhoeae F62] gi|193935001|gb|ACF30825.1| HemK [Neisseria gonorrhoeae NCCP11945] gi|226511780|gb|EEH61125.1| hemK protein [Neisseria gonorrhoeae 1291] gi|268551685|gb|EEZ46704.1| hemK protein [Neisseria gonorrhoeae FA19] gi|268584278|gb|EEZ48954.1| hemK protein [Neisseria gonorrhoeae MS11] gi|268586691|gb|EEZ51367.1| hemK protein [Neisseria gonorrhoeae PID1] gi|268621393|gb|EEZ53793.1| hemK protein [Neisseria gonorrhoeae PID332] gi|268625496|gb|EEZ57896.1| hemK protein [Neisseria gonorrhoeae SK-92-679] gi|268625873|gb|EEZ58273.1| hemK protein [Neisseria gonorrhoeae SK-93-1035] gi|291011766|gb|EFE03762.1| protein methyltransferase hemK [Neisseria gonorrhoeae DGI2] gi|291611896|gb|EFF40965.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Neisseria gonorrhoeae F62] Length = 295 Score = 118 bits (295), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 84/221 (38%), Positives = 113/221 (51%), Gaps = 12/221 (5%) Query: 44 RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103 R L E + ILG R+FY R T++ + PRPETE LV++ LA LP + R+ D Sbjct: 76 RRLNGEPVAYILGVREFYGRRFTVNPNVLIPRPETEHLVEAVLA-RLP-----ENGRVWD 129 Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS--- 160 LGTG+GAV + + E P DIS ALE A+ NA G R + WF + Sbjct: 130 LGTGSGAVAVTVALERPDAFVRASDISTPALETARKNAADLGA--RVEFAHGSWFDTDMP 187 Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220 E +D+IVSNPPYIE+ ++R F+P+I+L DGLS RT+A G L + Sbjct: 188 SERQWDIIVSNPPYIENGDKHLSQGDLR-FEPQIALTDFSDGLSCIRTLAQGAPDRLAEG 246 Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 G +E G++Q V + V D G DRV L Sbjct: 247 GFLLLEHGFDQGAAVRGVLAENGFSGVEILPDLAGLDRVTL 287 >gi|256830554|ref|YP_003159282.1| modification methylase, HemK family [Desulfomicrobium baculatum DSM 4028] gi|256579730|gb|ACU90866.1| modification methylase, HemK family [Desulfomicrobium baculatum DSM 4028] Length = 280 Score = 118 bits (295), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 76/254 (29%), Positives = 129/254 (50%), Gaps = 6/254 (2%) Query: 7 SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66 + L + G+ +++D + +D+ R + VR +K E + ++G ++FY Sbjct: 27 AQVLLAHILGMERLDMLLDVGAPVDEPCRLRMDELGVRRMKGEPVAYLVGEKEFYGFTFR 86 Query: 67 LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126 + PRPETEL++D L ++ +++LD+GTG+GA+ ++ P+ Sbjct: 87 VGPGVLIPRPETELILDHLLE----SLDTNARLQVLDIGTGSGALAVSCANLFPYSCVAA 142 Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGL 185 VDIS +AL++A NA+ + V +R LQ D S+ FDV+++N PY+ L Sbjct: 143 VDISFEALKVACKNALLHDVQDRIVFLQGDLLESLRIDSFDVVLANLPYVPLTTKKTLSR 202 Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245 EV +P +L G+DGL YR +A +S + L EI ++Q + V+ +F Sbjct: 203 EVLCHEPHSALFSGLDGLDCYRALARSLSGAMKPGALLLCEIDHSQGLAVIDLFSGIAQN 262 Query: 246 LVNAFKDYGGNDRV 259 V KDY G DR+ Sbjct: 263 -VRILKDYAGLDRL 275 >gi|320181781|gb|EFW56691.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Shigella boydii ATCC 9905] Length = 277 Score = 118 bits (295), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 91/258 (35%), Positives = 127/258 (49%), Gaps = 8/258 (3%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 RD+ L VTG V+ ++ L D Q L + R E + + G R+F+++ Sbjct: 22 RDAEILLEYVTGRGRTFVLAFGETQLTDEQLQQLDALLARRRTGEPVAHLTGQREFWSLP 81 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L +S T PRP+TE LV+ AL LP RILDLGTGTGA+ LAL E P + Sbjct: 82 LFVSPATLIPRPDTECLVEQALE-RLP----EQPCRILDLGTGTGAIALALASERPDCEI 136 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183 VD A+ +A+ NA + + LQSDWFS++ G F +IVSNPPYI+ Sbjct: 137 TAVDRMPDAVALAQRNAQHLAI-KNIHILQSDWFSALAGQQFAMIVSNPPYIDEQDPHLQ 195 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 +VR F+P +L G++ I + L G +E G+ Q V + F Sbjct: 196 QGDVR-FEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFILAG 254 Query: 244 LFLVNAFKDYGGNDRVLL 261 V +DYG N+RV L Sbjct: 255 YHDVETCRDYGDNERVTL 272 >gi|27904664|ref|NP_777790.1| hypothetical protein bbp162 [Buchnera aphidicola str. Bp (Baizongia pistaciae)] gi|32129595|sp|Q89AT0|HEMK_BUCBP RecName: Full=Protein methyltransferase hemK homolog gi|27904061|gb|AAO26895.1| HemK [Buchnera aphidicola str. Bp (Baizongia pistaciae)] Length = 277 Score = 118 bits (295), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 78/248 (31%), Positives = 129/248 (52%), Gaps = 12/248 (4%) Query: 12 CRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDT 71 CR +S+ + + D+++D L + R + E I ++ ++F+++ +S+ T Sbjct: 36 CRTWIISNDFIKLTYDNLID------LNVLLQRRMNSEPISYLIHVKEFWSLPFLVSNST 89 Query: 72 FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131 PRP+TE+LV+ AL + ++ ++LDLGTG G++ LAL E K +G+D Sbjct: 90 LIPRPDTEILVEKALIY----LKNLSNAKVLDLGTGCGSIALALASERLDCKIIGIDCVK 145 Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFD 191 +++ IA NA + + L S WFS V+ +FD+IVSNPPY+ + + EV F+ Sbjct: 146 ESISIASKNAKILKL-KNVSFLHSIWFSKVDNMFDMIVSNPPYLSFSEMKNVDKEVL-FE 203 Query: 192 PRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK 251 P I+L +GL R I ++L VE G+ QK V F +N ++ Sbjct: 204 PFIALFSSENGLGAIRHIIKYSKKYLYSKAWLLVEHGWKQKDKVQSFFYKYSFININTYR 263 Query: 252 DYGGNDRV 259 DY +DRV Sbjct: 264 DYCDSDRV 271 >gi|320546677|ref|ZP_08040989.1| protein-(glutamine-N5) methyltransferase [Streptococcus equinus ATCC 9812] gi|320448732|gb|EFW89463.1| protein-(glutamine-N5) methyltransferase [Streptococcus equinus ATCC 9812] Length = 276 Score = 118 bits (295), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 82/230 (35%), Positives = 121/230 (52%), Gaps = 15/230 (6%) Query: 38 LTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR 96 L I+ LK H S I G F ++ L + PRPETE LVD L K Sbjct: 54 LIEDIMSQLKEHRSPQYITGKAYFRDLELDVDERVLIPRPETEELVD----LVLKENSKA 109 Query: 97 DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 D+ +ILD+GTG+GA+ ++L P + DIS +AL++AK N+ VS D ++SD Sbjct: 110 DL-QILDIGTGSGAIAISLKSARPDWHVTASDISSEALQLAKENSERKQVS--LDFIESD 166 Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216 F+ + G FDVI+SNPPYI +G+ V +P ++L DG + YR I +G + H Sbjct: 167 VFNQISGKFDVIISNPPYIAYDDEGEVGVNVLASEPHLALFADEDGFAIYRRIIEGANSH 226 Query: 217 LNKDGLCSVEIGYNQKVDVVRI----FESRKLFLVNAFKDYGGNDRVLLF 262 L ++G EIGY Q + R+ F ++ V +D G DR+++ Sbjct: 227 LTENGKLYFEIGYKQGDGMRRLLAQHFPEKR---VRVLQDVFGKDRMVVM 273 >gi|329904247|ref|ZP_08273722.1| methylase of polypeptide chain release factor [Oxalobacteraceae bacterium IMCC9480] gi|327548071|gb|EGF32800.1| methylase of polypeptide chain release factor [Oxalobacteraceae bacterium IMCC9480] Length = 278 Score = 118 bits (295), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 82/251 (32%), Positives = 127/251 (50%), Gaps = 10/251 (3%) Query: 10 FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69 L GL+ ++I + +L Q ++ R + E I ++G R+FY +R ++ Sbjct: 27 LLGHALGLTRIELITGNEQMLTPAQAQRVSALFERRIAGEPIAYLVGTREFYGLRFEVTP 86 Query: 70 DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129 PRPETELLV+ A+ LPR R+LD+GTG+GA+ +AL +D Sbjct: 87 AVLIPRPETELLVELAID-RLPRQG-----RVLDMGTGSGAIAVALANSRRDAAVSAIDF 140 Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVR 188 S AL +A+ NA + V +SDW++++EG FD+IV+NPPYI ++R Sbjct: 141 SDAALAVARRNAAHHAVQVHLQ--RSDWYAALEGQCFDMIVANPPYIVEGDHHLSEGDLR 198 Query: 189 DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN 248 F+P +L DGLS R I G + L G +E GY+Q V + ++ + V Sbjct: 199 -FEPVDALTDHADGLSALRQIVSGATAALAPAGWLLMEHGYDQAAAVCALLDAAQFTDVQ 257 Query: 249 AFKDYGGNDRV 259 ++ D G RV Sbjct: 258 SWPDLAGIARV 268 >gi|240015595|ref|ZP_04722135.1| HemK [Neisseria gonorrhoeae FA6140] gi|240114685|ref|ZP_04728747.1| HemK [Neisseria gonorrhoeae PID18] gi|268600328|ref|ZP_06134495.1| hemK protein [Neisseria gonorrhoeae PID18] gi|268584459|gb|EEZ49135.1| hemK protein [Neisseria gonorrhoeae PID18] Length = 301 Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 84/221 (38%), Positives = 113/221 (51%), Gaps = 12/221 (5%) Query: 44 RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103 R L E + ILG R+FY R T++ + PRPETE LV++ LA LP + R+ D Sbjct: 82 RRLNGEPVAYILGVREFYGRRFTVNPNVLIPRPETEHLVEAVLA-RLP-----ENGRVWD 135 Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS--- 160 LGTG+GAV + + E P DIS ALE A+ NA G R + WF + Sbjct: 136 LGTGSGAVAVTVALERPDAFVRASDISTPALETARKNAADLGA--RVEFAHGSWFDTDMP 193 Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220 E +D+IVSNPPYIE+ ++R F+P+I+L DGLS RT+A G L + Sbjct: 194 SERQWDIIVSNPPYIENGDKHLSQGDLR-FEPQIALTDFSDGLSCIRTLAQGAPDRLAEG 252 Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 G +E G++Q V + V D G DRV L Sbjct: 253 GFLLLEHGFDQGAAVRGVLAENGFSGVEILPDLAGLDRVTL 293 >gi|253702391|ref|YP_003023580.1| modification methylase, HemK family [Geobacter sp. M21] gi|251777241|gb|ACT19822.1| modification methylase, HemK family [Geobacter sp. M21] Length = 285 Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 84/238 (35%), Positives = 123/238 (51%), Gaps = 11/238 (4%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 ++ LC L + ++ D L D + + R + E + ILG ++F + Sbjct: 32 EAEWMLCEALSLDRVGLYLNFDKPLSDAELALYRGMVARRGRREPLQYILGSQEFMGLEF 91 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR-ILDLGTGTGAVCLALLKESPFFKG 124 ++ PR +TE+LV A +++ R ILD+GTG+G V +A+ K P + Sbjct: 92 RVTPAVLIPRHDTEVLVTEA-------VKRGGACRSILDIGTGSGCVAIAVAKALPEAEV 144 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCL 183 VD+S +A+E+A+ NA NGVS +F Q F G FD++VSNPPYI S + L Sbjct: 145 CTVDVSGEAIEVARGNAERNGVSVQF--FQGSLFEPFAGKRFDMLVSNPPYITSADLASL 202 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 EVRDF+P +LDGG DGL YR I G HLN G E+G Q +V+ + S Sbjct: 203 QQEVRDFEPAGALDGGGDGLDFYRRITAGAPAHLNPGGWLLFEVGAGQAGEVLELLNS 260 >gi|170696250|ref|ZP_02887382.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Burkholderia graminis C4D1M] gi|170138810|gb|EDT07006.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Burkholderia graminis C4D1M] Length = 288 Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 91/266 (34%), Positives = 134/266 (50%), Gaps = 23/266 (8%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDR--QRFFLTNAIVRSLKHESIHRILGWRDFYNV 63 ++ L V G Q+I D LD +R+ A R + E I +I+G R+F+ + Sbjct: 28 EARILLTHVLGWRHTQLITRADEALDSECVERYLALQA--RRVAGEPIAQIVGVREFFGL 85 Query: 64 RLTLSSDTFEPRPETELLVDSALAF--SLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 ++ PRPETELLV++AL +LPR R+LDLGTGTGA+ +A+ P Sbjct: 86 EFEVTPHVLIPRPETELLVETALTAMENLPR------PRVLDLGTGTGAIAVAIASMRPD 139 Query: 122 FKGVGVDISCKALEIAKS------NAVTNGVSERFDTLQSDWFSSVEGL--FDVIVSNPP 173 + +D S +AL +A +A G + F QSDW+ S++ FDVIVSNPP Sbjct: 140 AQVTALDRSAEALAVAARNAARLLDAKRAGGAVTF--AQSDWYGSLDTALRFDVIVSNPP 197 Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233 YI S ++R ++PR +L DGLS R I G L G+ +E GYNQ Sbjct: 198 YIASGDPHLEQGDLR-YEPRGALTDEADGLSAIRAIVAGAPARLAARGVLWMEHGYNQAE 256 Query: 234 DVVRIFESRKLFLVNAFKDYGGNDRV 259 V + ++ V + +D G +R+ Sbjct: 257 AVRELLTAQGFVDVRSERDLAGIERI 282 >gi|240013153|ref|ZP_04720066.1| HemK [Neisseria gonorrhoeae DGI18] gi|240081797|ref|ZP_04726340.1| HemK [Neisseria gonorrhoeae FA19] gi|240114077|ref|ZP_04728567.1| HemK [Neisseria gonorrhoeae MS11] gi|240116887|ref|ZP_04730949.1| HemK [Neisseria gonorrhoeae PID1] gi|240120224|ref|ZP_04733186.1| HemK [Neisseria gonorrhoeae PID24-1] gi|240122522|ref|ZP_04735478.1| HemK [Neisseria gonorrhoeae PID332] gi|240126630|ref|ZP_04739516.1| HemK [Neisseria gonorrhoeae SK-92-679] gi|240127232|ref|ZP_04739893.1| HemK [Neisseria gonorrhoeae SK-93-1035] gi|260441507|ref|ZP_05795323.1| HemK [Neisseria gonorrhoeae DGI2] Length = 273 Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 84/221 (38%), Positives = 113/221 (51%), Gaps = 12/221 (5%) Query: 44 RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103 R L E + ILG R+FY R T++ + PRPETE LV++ LA LP + R+ D Sbjct: 54 RRLNGEPVAYILGVREFYGRRFTVNPNVLIPRPETEHLVEAVLA-RLP-----ENGRVWD 107 Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS--- 160 LGTG+GAV + + E P DIS ALE A+ NA G R + WF + Sbjct: 108 LGTGSGAVAVTVALERPDAFVRASDISTPALETARKNAADLGA--RVEFAHGSWFDTDMP 165 Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220 E +D+IVSNPPYIE+ ++R F+P+I+L DGLS RT+A G L + Sbjct: 166 SERQWDIIVSNPPYIENGDKHLSQGDLR-FEPQIALTDFSDGLSCIRTLAQGAPDRLAEG 224 Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 G +E G++Q V + V D G DRV L Sbjct: 225 GFLLLEHGFDQGAAVRGVLAENGFSGVEILPDLAGLDRVTL 265 >gi|332366922|gb|EGJ44663.1| protein-(glutamine-N5) methyltransferase [Streptococcus sanguinis SK1059] Length = 276 Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 77/218 (35%), Positives = 115/218 (52%), Gaps = 12/218 (5%) Query: 46 LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLG 105 L H+ I+G DF+ + L + PRPETE LV+ L+ + V +LD+G Sbjct: 63 LAHKPAQYIIGSSDFHGLTLKVDERVLIPRPETEELVELILSEN-----PESSVSVLDIG 117 Query: 106 TGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF 165 TG+GA+ LAL P ++ D+S AL +A NA + G++ F ++SD +++ F Sbjct: 118 TGSGAIALALANNRPDWQITASDLSEDALALATENAQSCGLNLTF--VRSDCLDAIQEKF 175 Query: 166 DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225 D+IVSNPPYI D +GL V +P ++L DG + YR IA+ +L K G + Sbjct: 176 DIIVSNPPYISEEDKDEVGLNVLTSEPHMALFAEEDGYAVYRKIAEQAGDYLTKKGKIYL 235 Query: 226 EIGYNQKVDVVRIFESRKLF---LVNAFKDYGGNDRVL 260 EIGY Q V + +K F + KD G DR++ Sbjct: 236 EIGYKQGDGVRELL--KKSFPKKRIRVLKDQFGKDRMV 271 >gi|317473031|ref|ZP_07932331.1| protein-(glutamine-N5) methyltransferase [Anaerostipes sp. 3_2_56FAA] gi|316899460|gb|EFV21474.1| protein-(glutamine-N5) methyltransferase [Anaerostipes sp. 3_2_56FAA] Length = 291 Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 75/213 (35%), Positives = 113/213 (53%), Gaps = 12/213 (5%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110 + ++G +DF ++ D PR +TE ++++ + + P ILD+ TG+G Sbjct: 85 LQYLIGTQDFMGYTFRVTPDVLIPRQDTESVIEAVVEGNYPH------ESILDVCTGSGC 138 Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170 + ++L +G DI KAL+IAK N +F +SD FS V+G FD+I+S Sbjct: 139 IAISLCLMLKPDVCIGTDIDEKALKIAKENGRRLAPMVKFK--KSDLFSGVDGCFDLIIS 196 Query: 171 NPPYIESVIVDCLGL--EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228 NPPYI + DC+ L EV+D +P ++LDG DGL YR +A +HLN G EIG Sbjct: 197 NPPYIPTK--DCMELMPEVKDHEPMLALDGREDGLYFYRKLAGTAPKHLNAGGTLVFEIG 254 Query: 229 YNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 Y+Q V + E V KD G DR+++ Sbjct: 255 YDQGAAVKTMMEEAGFSSVEIKKDLAGLDRMVI 287 >gi|53804791|ref|YP_113525.1| protein methyltransferase HemK [Methylococcus capsulatus str. Bath] gi|53758552|gb|AAU92843.1| protein methyltransferase HemK [Methylococcus capsulatus str. Bath] Length = 284 Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 87/258 (33%), Positives = 130/258 (50%), Gaps = 12/258 (4%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLD-DRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 D+ L V G + + P+ +L D +R FL + R+ + + + G R+F++ Sbjct: 26 DAEVLLAHVIGKNRAYLRAWPERLLQADEERRFLASIAARA-RGVPVAYLTGVREFWSRS 84 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 + D PRPETELLV+ A+ + +R+ RILDLGTG+G + + L E P + Sbjct: 85 FKVCPDVLIPRPETELLVELAVEAAC----RRNRPRILDLGTGSGVIAVTLALECPDAEV 140 Query: 125 VGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVD 181 VD+S AL +A+ NA G RF L+ DWF+ + FD+IVSNPPY+ Sbjct: 141 WAVDVSESALAVARHNAAALGAKTVRF--LRGDWFAPLPADIRFDLIVSNPPYVSPSDPH 198 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 L ++R ++PR +L DGL IAD L DG +E G++Q V RI Sbjct: 199 LLRGDLR-YEPRQALVSVKDGLHDIALIADNAGPRLLPDGGLMIEHGFDQADAVARILGK 257 Query: 242 RKLFLVNAFKDYGGNDRV 259 V +D G++RV Sbjct: 258 AGYRDVRHHRDLQGHERV 275 >gi|15605689|ref|NP_213065.1| protoporphyrinogen oxidase [Aquifex aeolicus VF5] gi|6225500|sp|O66506|HEMK_AQUAE RecName: Full=Protein methyltransferase hemK homolog; AltName: Full=M.AaoHemKP gi|2982836|gb|AAC06458.1| protoporphyrinogen oxidase [Aquifex aeolicus VF5] Length = 281 Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 74/192 (38%), Positives = 110/192 (57%), Gaps = 7/192 (3%) Query: 74 PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133 PRPETE+L++ L +P + R++V +LG+GTG + + LL E P D++ A Sbjct: 94 PRPETEILIERTLEL-IP--QDREMVG-FELGSGTGCISINLLIERPKLVMYATDVNPDA 149 Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDP 192 +E+ K NA + V +R + F V+G+ FD IVSNPPYI + L EV+ + Sbjct: 150 VELTKENAKLHKVDDRLFVFLGNAFEPVKGMKFDFIVSNPPYIPENFWEILPEEVKK-EG 208 Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKD 252 SL GG G Y IA+ ++HL ++G ++EIG++Q VV+ +K F VN FKD Sbjct: 209 YTSLIGGKKGWEFYELIAEEGTKHLKENGFIALEIGHDQG-KVVKELLEKKCFKVNIFKD 267 Query: 253 YGGNDRVLLFCR 264 Y G DRV++ R Sbjct: 268 YAGFDRVVIAQR 279 >gi|307708640|ref|ZP_07645103.1| HemK protein [Streptococcus mitis NCTC 12261] gi|307615214|gb|EFN94424.1| HemK protein [Streptococcus mitis NCTC 12261] Length = 278 Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 78/219 (35%), Positives = 113/219 (51%), Gaps = 16/219 (7%) Query: 48 HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTG 107 H+ I+G DFY ++L + PRPETE LV+ LA + P +LD+GTG Sbjct: 65 HKPAQYIIGQADFYGMQLKVDERVLIPRPETEELVELILAEN-PETN----FSVLDIGTG 119 Query: 108 TGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDV 167 +GA+ LAL K + DIS +AL +A NA ++ F +SD F+ + +D+ Sbjct: 120 SGAIALALAKNRSAWSVTAADISQEALNLASENAKNQKLNIFFK--KSDCFAEISEKYDI 177 Query: 168 IVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227 IVSNPPYI +GL V +P ++L DGL+ YR IA+ + +L G +EI Sbjct: 178 IVSNPPYISREDESEVGLNVLHSEPHLALFADEDGLAIYRRIAEDATDYLKDGGKIYLEI 237 Query: 228 GYNQKVDVVRIF-----ESRKLFLVNAFKDYGGNDRVLL 261 GY Q V +F E R + KD G DR+++ Sbjct: 238 GYKQGQSVPELFRKHLPEKR----LRTLKDQFGQDRMVV 272 >gi|304311493|ref|YP_003811091.1| Protein-glutamine N-methyltransferase [gamma proteobacterium HdN1] gi|301797226|emb|CBL45446.1| Protein-glutamine N-methyltransferase [gamma proteobacterium HdN1] Length = 289 Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 82/255 (32%), Positives = 127/255 (49%), Gaps = 9/255 (3%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ LC V + + L+ Q + + R L+ E + +LG ++F+++ L Sbjct: 29 DAELLLCAVLERGRTWLRIHDGECLNAAQARAFDDWLERRLRGEPVAYLLGCQEFWSLPL 88 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 ++ T PRP+TE LV+ ALA + + +LDLGTGTGA+ LAL E + Sbjct: 89 KVAPCTLIPRPDTERLVEVALARA-----PENCTTVLDLGTGTGAIALALKHERRHWHVT 143 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLG 184 D A +A NA G+S + L+SDW +++ G FD+IVSNPPYI+ G Sbjct: 144 ATDRVEMAAALASENAQQLGLS--LEVLESDWLAALTGRRFDLIVSNPPYIDPHDPHLRG 201 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 V ++P +L GL +TI + +HL +G+ ++E GY+Q V R+ Sbjct: 202 DGV-SYEPLSALVAEHGGLGDLKTIVEHAPQHLCAEGVLALEHGYDQAQAVGRLLLGAGF 260 Query: 245 FLVNAFKDYGGNDRV 259 + DYGG RV Sbjct: 261 DDIQTHHDYGGQVRV 275 >gi|322391879|ref|ZP_08065344.1| protein-(glutamine-N5) methyltransferase [Streptococcus peroris ATCC 700780] gi|321145359|gb|EFX40755.1| protein-(glutamine-N5) methyltransferase [Streptococcus peroris ATCC 700780] Length = 276 Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 86/260 (33%), Positives = 125/260 (48%), Gaps = 13/260 (5%) Query: 6 DSHSFLCRV-TGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 +S SF+ R+ LS I + ++ F+ + + + H I+G +FY + Sbjct: 22 ESLSFVYRILKNLSFTDFIFAIQQEITPEEKEFVESIYKQLVAHVPAQYIIGHAEFYGME 81 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L + PRPETE LV+ L + + +LD+GTG+GA+ LAL K P + Sbjct: 82 LKVDERVLIPRPETEELVELILTEN-----PNPNLSVLDIGTGSGAIALALAKNRPDWCV 136 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184 DIS AL +A NA + F +SD F + +D+IVSNPPYI +G Sbjct: 137 TASDISPDALNLASENAKLQDLKISFK--KSDCFEEITENYDIIVSNPPYISRADESEVG 194 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 L V +P ++L DGL+ YR IA HL + G +EIGY Q V +F RK Sbjct: 195 LNVLHSEPHLALFAEEDGLAIYRKIAQEAKHHLREGGEIYLEIGYKQGHSVPALF--RKY 252 Query: 245 FL---VNAFKDYGGNDRVLL 261 V KD G DR+++ Sbjct: 253 LPEKRVRTLKDQFGQDRMVV 272 >gi|86148711|ref|ZP_01066988.1| HemK protein [Vibrio sp. MED222] gi|85833504|gb|EAQ51685.1| HemK protein [Vibrio sp. MED222] Length = 290 Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 89/272 (32%), Positives = 127/272 (46%), Gaps = 25/272 (9%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ LC ++ P+ L Q + R L E + I+G R+F+++ L Sbjct: 29 DAAVLLCHALDKPRSYLLTWPEKHLTSEQESEFHTLLKRRLTGEPVAYIVGEREFWSLPL 88 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 +S T PRP+TE LV+ AL + + ILDLGTGTGA+ LAL E Sbjct: 89 KVSPSTLIPRPDTERLVEVALDKTYGKQGA-----ILDLGTGTGAIALALASEMSNRPVT 143 Query: 126 GVDISCKALEIAKSNA----VTNGVSERFDTLQSDWFSSVEGL--------FDVIVSNPP 173 G+D+ +A ++A NA +TN L WF + + F +IVSNPP Sbjct: 144 GIDLRPEAQQLATENAQRLNITNAT-----FLHGSWFEPLNSVNSEEKAVKFSLIVSNPP 198 Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233 YIE +VR F+P +L GL+ R I++ L +G + E GY+Q + Sbjct: 199 YIEKNDPHLSQGDVR-FEPITALVAEEKGLADIRYISENARSFLENEGWLAFEHGYDQGL 257 Query: 234 DVVRIFESRKLFLVNAFKDYGGNDRVLL--FC 263 V I + V KDYGGNDRV L +C Sbjct: 258 AVREIMLALGYLDVVTEKDYGGNDRVTLGRYC 289 >gi|313888255|ref|ZP_07821926.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Peptoniphilus harei ACS-146-V-Sch2b] gi|312845658|gb|EFR33048.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Peptoniphilus harei ACS-146-V-Sch2b] Length = 276 Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 75/211 (35%), Positives = 113/211 (53%), Gaps = 9/211 (4%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110 + ILG DFY + PR +TE+ V L + +L++G GTG Sbjct: 70 LQYILGEEDFYGRTFKVIEGVLIPRQDTEISVKKILNIIENNQ----INNMLEIGCGTGI 125 Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170 V +++ ES VDIS KA+E K N ++ + ++SD FS++ FD+I S Sbjct: 126 VSISVDLESSV-DVTAVDISEKAIENTKINK--EKLNSKIKIIKSDLFSNINEKFDLIYS 182 Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230 NPPYI+S ++ L +EVRD++PR++LDGG DGL YR+I LN G EIGY+ Sbjct: 183 NPPYIKSKEIENLQVEVRDYEPRLALDGGEDGLFFYRSIIKSSPEFLNHKGFLVFEIGYD 242 Query: 231 QKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 + D+ + + + F V +KD DRV++ Sbjct: 243 EAEDICNLMKDK--FEVEVYKDLNNLDRVVV 271 >gi|303247809|ref|ZP_07334078.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Desulfovibrio fructosovorans JJ] gi|302490893|gb|EFL50792.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Desulfovibrio fructosovorans JJ] Length = 326 Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 79/257 (30%), Positives = 123/257 (47%), Gaps = 8/257 (3%) Query: 7 SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66 + L GL +I+ D L + + + R + E + +LG R+FY + Sbjct: 69 AQLLLAHALGLDRLGLILAMDRPLIEAELDAYRPLVARRGQGEPVAYLLGEREFYGLSFA 128 Query: 67 LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126 +S DT PRPETE +V+ AL + DLGTG+G + + L + P GV Sbjct: 129 VSPDTLIPRPETEGIVEHALEL----FPGDGPGSLADLGTGSGCLAVTLAVKWPLATGVA 184 Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIVDCL 183 +D S AL +A+ NA +GV R D +++D F+++ +G + ++VSNPPY+ + Sbjct: 185 LDRSAGALTVARGNAARHGVDGRLDFVEAD-FAALPVRQGGYGLVVSNPPYVSAAEYRAC 243 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 EVRDF+P+ +L G GL +A L G VEIG+ Q + Sbjct: 244 SFEVRDFEPQGALVPGESGLEAVPVVARTAFDRLAPGGWLLVEIGWEQGPAAAAVLAEAG 303 Query: 244 LFLVNAFKDYGGNDRVL 260 V +D G+DRV+ Sbjct: 304 FADVAVRRDLAGHDRVV 320 >gi|71065791|ref|YP_264518.1| HemK family modification methylase [Psychrobacter arcticus 273-4] gi|71038776|gb|AAZ19084.1| probable modification methylase, HemK family [Psychrobacter arcticus 273-4] Length = 305 Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 80/259 (30%), Positives = 131/259 (50%), Gaps = 27/259 (10%) Query: 22 VIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELL 81 +I D + L D + + + + + + G + F+++ T++ T PRP+TE+L Sbjct: 47 LITDDNYQLSDSETERFNAGMTKMQQGTPLAYLTGTQAFWSLDFTVNEHTLIPRPDTEVL 106 Query: 82 VDSALAF-------SLPRIEKRDVVRILDLGTGTGAVCLALLKESPF--------FKGVG 126 V++ L + + P ++ +R+LDLGTG+G + ++L E ++ V Sbjct: 107 VETVLDWIKSQPFSTTPTLKS---MRLLDLGTGSGCIAISLAHELKLADTLKQVSWQVVA 163 Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV----EGLFDVIVSNPPYIESVIVDC 182 VD S +AL+IA+ NAV+N V F + S W+ + E LFDVIVSNPPYI+ Sbjct: 164 VDFSLEALKIAQHNAVSNAVEVTF--VHSSWYDELPTQDEQLFDVIVSNPPYIDEADEHL 221 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 GL +P +L GL+ I ++L GL ++E GY+Q V ++F Sbjct: 222 AGLLA---EPISALSAPNHGLADIEHIVYYAPQYLKVGGLLAIEHGYDQGQAVRQLFADN 278 Query: 243 KLFLVNAFKDYGGNDRVLL 261 + KD+GGNDR+ L Sbjct: 279 HFDNIRTIKDFGGNDRMTL 297 >gi|282857118|ref|ZP_06266364.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Pyramidobacter piscolens W5455] gi|282585053|gb|EFB90375.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Pyramidobacter piscolens W5455] Length = 286 Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 78/236 (33%), Positives = 115/236 (48%), Gaps = 9/236 (3%) Query: 26 PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85 PD+V L+ A R K E + ILG DF + L + + PRPETELLV+ A Sbjct: 49 PDAVPASVAEAALS-ACARRKKREPLQYILGCCDFDGLSLLVEAGCLVPRPETELLVECA 107 Query: 86 LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145 E D LD GTGTG + +ALL P + + V+ + +L A+ N G Sbjct: 108 -------AENFDGGAFLDWGTGTGCIAVALLNRFPAARALMVEKNPASLNCARRNLEKFG 160 Query: 146 VSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204 S R + S+ + ++VSNPPY+ S ++ L EV ++PR++LDGG DGL Sbjct: 161 FSPRARLIASETPEDIPACEVSLVVSNPPYVPSGEIERLMPEVSQYEPRLALDGGPDGLE 220 Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 YR + + +R L + G VE G + + +R + +D G DRV+ Sbjct: 221 PYRRLFELCARVLRRGGFFCVEYGGGAQTEALRALAPKAFRETVLLRDIAGCDRVI 276 >gi|33866508|ref|NP_898067.1| protoporphyrinogen oxidase [Synechococcus sp. WH 8102] gi|33633286|emb|CAE08491.1| possible protoporphyrinogen oxidase [Synechococcus sp. WH 8102] Length = 296 Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 72/211 (34%), Positives = 105/211 (49%), Gaps = 10/211 (4%) Query: 57 WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116 WRD L +S+ PR ETE+LVD +L I + R DLGTG+GA+ +AL Sbjct: 87 WRDL---ELAVSAAALIPRQETEVLVD----LALETIAGMSIERWADLGTGSGAIAVALS 139 Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPP 173 + P G VD+S AL +A++N + Q W+ +E G D++V NPP Sbjct: 140 RAMPATPGHAVDLSPNALALARTNLEALAPEGEWHLHQGRWWEPLEPWWGHIDLVVCNPP 199 Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233 YI S ++ L VRD +P ++L GGIDGL R + G R L G +E ++Q Sbjct: 200 YIPSDLILNLDPVVRDHEPHLALAGGIDGLQAIREVVAGACRALAPGGWILIEHHHDQSA 259 Query: 234 DVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 + + + L + A +D G +R L R Sbjct: 260 PALNLLKQAGLSSIRAARDLEGVNRFALARR 290 >gi|325107094|ref|YP_004268162.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Planctomyces brasiliensis DSM 5305] gi|324967362|gb|ADY58140.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Planctomyces brasiliensis DSM 5305] Length = 309 Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 76/261 (29%), Positives = 131/261 (50%), Gaps = 12/261 (4%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 +S L Q+ + +V+ + R + + R ++ E + ++G ++FY++ Sbjct: 48 ESEILLAHAQKCPRIQLYANYHTVVSEETRAQMRELVKRRVRREPVAYLVGHKEFYSLEF 107 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 + F PRPETE L++ L P +E+ IL+L TG+G + + L K P + + Sbjct: 108 AVEPGVFIPRPETETLINQGLEKLTP-VER---PHILELCTGSGCIAVTLAKRLPKARVI 163 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVIVDC 182 V+ + L +++SNA + V +R L+ D F+ V FD+IVSNPPYI S + Sbjct: 164 AVEKNPIPLRVSRSNAEKHQVDDRVQILEGDLFAPVPTDGPRFDLIVSNPPYIRSDEIPG 223 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ---KVDVVRIF 239 L +VR+ +P +LDGG DGL R I ++L G +E+ Q D+ R Sbjct: 224 LVADVREHEPHAALDGGADGLDMIRVIIAQAPKYLKPGGWLMLEMDPAQIEATHDIAR-- 281 Query: 240 ESRKLFLVNAFKDYGGNDRVL 260 +SR+ A++D ++R + Sbjct: 282 QSRQWTTQQAYRDLFEDERCI 302 >gi|71278012|ref|YP_270225.1| HemK family modification methylase [Colwellia psychrerythraea 34H] gi|71143752|gb|AAZ24225.1| modification methylase, HemK family [Colwellia psychrerythraea 34H] Length = 285 Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 82/255 (32%), Positives = 129/255 (50%), Gaps = 7/255 (2%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ LC V ++ P+ + ++ + R + E I I+G ++F+++ Sbjct: 27 DAQILLCFVLDKERSYLLTWPEKEVTEQSEQQYLALLQRRIMGEPIAYIVGVQEFWSLPF 86 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 +S T PRP+TE+LV+ L + D + LDLGTGTGA+ LAL E P ++ Sbjct: 87 RVSPATLIPRPDTEVLVE----LVLEHFGELDTLHCLDLGTGTGAIALALASEQPNWQID 142 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLG 184 +D S A+++AK NA +S + QSDWF++V E FDVIVSNPPYI+++ Sbjct: 143 AIDFSLDAVKLAKQNAQDLHLS-HVNIFQSDWFNAVNERKFDVIVSNPPYIDALDKHLSQ 201 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 +VR +P +L GL + IA + LN G E G+ Q V I + Sbjct: 202 GDVR-CEPESALVADEQGLGDIKHIAQQALKFLNTHGSLFFEHGFEQGQAVRNILTALGY 260 Query: 245 FLVNAFKDYGGNDRV 259 V +D+ G++R+ Sbjct: 261 DNVQTVRDFNGHERI 275 >gi|294142152|ref|YP_003558130.1| hemK family protein [Shewanella violacea DSS12] gi|293328621|dbj|BAJ03352.1| hemK family protein [Shewanella violacea DSS12] Length = 280 Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 79/237 (33%), Positives = 124/237 (52%), Gaps = 8/237 (3%) Query: 26 PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85 PD L Q T + R + I I+G R+F+++ ++ T PRP+TE+LV++A Sbjct: 46 PDERLASEQVVDYTKMVHRRVLGTPIAHIVGEREFWSLPFMVNPTTLIPRPDTEILVETA 105 Query: 86 LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145 L +LP E ++LDLGTGTGA+ L+L E ++ VD +A+ +AK+N Sbjct: 106 L--NLPLAEN---AKVLDLGTGTGAIALSLAYEKSQWQITAVDKIIEAVALAKANRAHLK 160 Query: 146 VSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204 + ++ + ++SDWF SV F++IVSNPPYI+ +VR F+P+ +L G G + Sbjct: 161 L-QQVEIIKSDWFDSVTCYDFNLIVSNPPYIDETDAHLDQGDVR-FEPQSALTAGEAGFA 218 Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 IA +L G +E GY Q + + + V +D+G NDR L Sbjct: 219 DLYHIASSARDYLAPGGYLLLEHGYEQAIQLRKKMIELGYENVATVRDFGSNDRCTL 275 >gi|147679164|ref|YP_001213379.1| methylase of polypeptide chain release factors [Pelotomaculum thermopropionicum SI] gi|146275261|dbj|BAF61010.1| methylase of polypeptide chain release factors [Pelotomaculum thermopropionicum SI] Length = 300 Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 83/264 (31%), Positives = 135/264 (51%), Gaps = 18/264 (6%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L VTGLS + + VL + + + + R L E + + G ++F + Sbjct: 38 DAEVLLAYVTGLSRAGLYRKKELVLTEEEEARFIDLVERRLAGEPVAYLTGHKEFMGLDF 97 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL---LKESPFF 122 ++ PRPETEL+V++AL F LP I D+GTG+GAV ++L +KE+ + Sbjct: 98 VVNRSVLIPRPETELMVETALKF-LP-----GAPVIADVGTGSGAVAVSLAFFVKEAVVY 151 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERF-----DTLQSDWFSSVEGLFDVIVSNPPYIES 177 DIS +AL +A+ NA +GV R D L+ + G D+I +N PYI + Sbjct: 152 ---ATDISREALAVARLNAARHGVEGRVHFCPGDLLEPLTGRVMPGSLDLIAANLPYIAT 208 Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237 + L EVR F+P ++LDGG GL+ YR + + L + G+ +EI Q ++ Sbjct: 209 EDLPGLPREVRLFEPPVALDGGPGGLALYRRLIPAAAGFLKQGGIMLMEISPGQWAEMAG 268 Query: 238 IFESRKLFLVNAFKDYGGNDRVLL 261 + + + + + KD G DR++L Sbjct: 269 LLQPPQ-WEASLLKDLAGLDRLVL 291 >gi|268592709|ref|ZP_06126930.1| protein-(glutamine-N5) methyltransferase [Providencia rettgeri DSM 1131] gi|291311852|gb|EFE52305.1| protein-(glutamine-N5) methyltransferase [Providencia rettgeri DSM 1131] Length = 277 Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 86/260 (33%), Positives = 136/260 (52%), Gaps = 8/260 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A RD+ L VTG S + ++ L + + R K E I I+G R+F++ Sbjct: 20 AKRDAEILLEHVTGRSRTYLFAFGETELKAEEFQQAELLLQRREKGEPIAYIIGEREFWS 79 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +S T PRP+TE +V+ AL+ R+ ++ +ILDLGTGTGA+ LAL E Sbjct: 80 LPLYVSPATLIPRPDTECIVEQALS----RLTEQKN-QILDLGTGTGAIALALASEMQQS 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVD 181 + +GVD + A+ +A+ N +S +QS+WFSS+ FD+I+SNPPYI+ + Sbjct: 135 QVIGVDFNPDAVALAQRNQQRLNIS-NVKFIQSNWFSSLSIQQFDMIISNPPYIDENDMH 193 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P +L +GL+ I ++L G +E G+ Q + V +F+ Sbjct: 194 LSEGDVR-FEPLTALVAKDEGLADLMHIIKESKKYLKNQGWLLLEHGWTQGLAVRDLFKV 252 Query: 242 RKLFLVNAFKDYGGNDRVLL 261 + DYGG +R+ L Sbjct: 253 HGYTKIETCLDYGGRERISL 272 >gi|163783633|ref|ZP_02178622.1| protoporphyrinogen oxidase [Hydrogenivirga sp. 128-5-R1-1] gi|159881126|gb|EDP74641.1| protoporphyrinogen oxidase [Hydrogenivirga sp. 128-5-R1-1] Length = 270 Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 75/209 (35%), Positives = 105/209 (50%), Gaps = 6/209 (2%) Query: 54 ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113 ++G DFY + PRPETELLV+ L I + ++G GTG + + Sbjct: 64 LIGEWDFYGRTFKVKEGVLIPRPETELLVEKTLEL----IPADKEMEGFEVGGGTGCISI 119 Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNP 172 LL E + D++ A+E+ K NA +GV R + + D FS V+G FD IVSNP Sbjct: 120 TLLLERGLLRMAVDDVNPTAVELMKENAKIHGVDYRLEVFEGDMFSPVKGRRFDFIVSNP 179 Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232 PYI + L EVR + R +L GG G Y A V RHL G ++EIG++Q Sbjct: 180 PYIPENFWERLPPEVRR-EGREALIGGEKGYEFYERFAKEVPRHLKGGGFVALEIGHDQG 238 Query: 233 VDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 V + + V +KDY G DRV++ Sbjct: 239 RVVEELLKGAGFERVIIYKDYSGQDRVVI 267 >gi|119357671|ref|YP_912315.1| HemK family modification methylase [Chlorobium phaeobacteroides DSM 266] gi|119355020|gb|ABL65891.1| modification methylase, HemK family [Chlorobium phaeobacteroides DSM 266] Length = 301 Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 79/226 (34%), Positives = 115/226 (50%), Gaps = 11/226 (4%) Query: 44 RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV----V 99 + L+ + + I G + FY + + PRPETELLV+ AL F L + DV + Sbjct: 73 QRLEGKPVQYITGEQFFYGLPFFVDKRVLIPRPETELLVEHALEF-LGHVSAADVSEAAL 131 Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 +LD+GTG+G + + L P +DIS +AL +A++NA +GV++R L +D FS Sbjct: 132 HLLDIGTGSGCIAVTLASRLPCLMVTAIDISTEALVVARNNAERHGVADRIRFLHADLFS 191 Query: 160 -----SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214 + FDVIVSNPPYI L EVR F+P+++L DG+ Y +A+ Sbjct: 192 LPDERGLSAPFDVIVSNPPYIAEDEWAGLQPEVRLFEPQLALTTR-DGIECYHAVAEVAP 250 Query: 215 RHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 L G+ E + + V I E V KDY G DRV+ Sbjct: 251 SLLKSGGMLCFESHADAALKVAGIMERWGFSSVAVMKDYSGLDRVV 296 >gi|317968709|ref|ZP_07970099.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Synechococcus sp. CB0205] Length = 300 Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 78/209 (37%), Positives = 109/209 (52%), Gaps = 15/209 (7%) Query: 57 WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV----RILDLGTGTGAVC 112 WRD + L ++ PR ETE+LVD AL + K D + R DLGTG+G + Sbjct: 85 WRD---IELEVAPGVLIPRQETEVLVDLALDCA-----KGDQLGSAPRWADLGTGSGCIA 136 Query: 113 LALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIV 169 +AL K P +G VD S +AL A+ NA S D + DW+ ++ G D++V Sbjct: 137 IALAKGLPNGQGCAVDRSAEALRQAERNAKAILGSACLDFREGDWWDAIRDQWGQLDLVV 196 Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY 229 SNPPYI + + L VR+ +P ++L+GG DGL RTIA G + L G +E Y Sbjct: 197 SNPPYIPAAVWAQLEPVVREHEPELALNGGSDGLEALRTIAAGAALGLTPGGWLLLEHHY 256 Query: 230 NQKVDVVRIFESRKLFLVNAFKDYGGNDR 258 +Q V+ + E+ L V A KD G R Sbjct: 257 DQSRAVLELLEAAGLVNVQAHKDLEGIQR 285 >gi|15616336|ref|NP_244641.1| protoporphyrinogen oxidase [Bacillus halodurans C-125] gi|10176398|dbj|BAB07493.1| protoporphyrinogen oxidase [Bacillus halodurans C-125] Length = 289 Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 74/216 (34%), Positives = 114/216 (52%), Gaps = 7/216 (3%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110 + ++G FY + + PRPETE LV + L + +K + + ILD+GTG+GA Sbjct: 68 VQHLIGVESFYGRQFQVDQHVLIPRPETEELVLAVLKEIRRQFKKEEEITILDIGTGSGA 127 Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW---FSSVEGLFDV 167 + + L E VDIS AL++A NA G + + + D F FDV Sbjct: 128 IAVTLALEEERTNVTAVDISRDALQVAADNARRLGANVQL--IHGDLGEPFLKTGERFDV 185 Query: 168 IVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD-GLCSVE 226 IVSNPPYI +V D L + VRD +P ++L GG+DGL YR + + ++ G+ ++E Sbjct: 186 IVSNPPYIPTVEKDTLAVHVRDHEPALALFGGVDGLDVYRRLMSQLPALTKEEKGMVALE 245 Query: 227 IGYNQKVDVVRIFESR-KLFLVNAFKDYGGNDRVLL 261 IG Q +DV ++ ++ V+ D G DR++L Sbjct: 246 IGAGQGMDVEKLMQTAYPKAAVDVLYDLNGKDRIVL 281 >gi|87309296|ref|ZP_01091432.1| hemK protein [Blastopirellula marina DSM 3645] gi|87287935|gb|EAQ79833.1| hemK protein [Blastopirellula marina DSM 3645] Length = 294 Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 71/225 (31%), Positives = 114/225 (50%), Gaps = 3/225 (1%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L + G ++ D V+ + R + + + +LG R+FY+ Sbjct: 31 DAELLLAQALGCKRIELYTRFDEVVAEEPRGKFRQLVKQRAAGMPVAYLLGRREFYSRDF 90 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 ++ D PRPETE LV +AL L K + RI D+G G+G + + L K+ P + Sbjct: 91 RVTPDVLIPRPETEHLVIAALD-RLRETAKTETARICDVGAGSGCIAITLAKDLPKLQVT 149 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIESVIVDCL 183 +DIS AL++A+ NA +GV+E+ ++SD +++ +FD+IVSNPPYI V L Sbjct: 150 AIDISAAALQVAQQNAEEHGVAEQIKFVKSDLLTALPENAVFDLIVSNPPYIGLVEKPSL 209 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228 +V ++P ++L G DGL R + HL G +E G Sbjct: 210 PKDVLQYEPHVALFSGEDGLDAIRELVRQAPSHLKPGGWLLIEFG 254 >gi|22537234|ref|NP_688085.1| HemK family modification methylase [Streptococcus agalactiae 2603V/R] gi|25011159|ref|NP_735554.1| modification methylase, HemK family [Streptococcus agalactiae NEM316] gi|76798428|ref|ZP_00780668.1| HemK protein [Streptococcus agalactiae 18RS21] gi|77410474|ref|ZP_00786835.1| modification methylase, HemK family [Streptococcus agalactiae CJB111] gi|77413281|ref|ZP_00789477.1| modification methylase, HemK family [Streptococcus agalactiae 515] gi|22534101|gb|AAM99957.1|AE014241_8 modification methylase, HemK family [Streptococcus agalactiae 2603V/R] gi|23095558|emb|CAD46767.1| Unknown [Streptococcus agalactiae NEM316] gi|76586223|gb|EAO62741.1| HemK protein [Streptococcus agalactiae 18RS21] gi|77160668|gb|EAO71783.1| modification methylase, HemK family [Streptococcus agalactiae 515] gi|77163422|gb|EAO74372.1| modification methylase, HemK family [Streptococcus agalactiae CJB111] gi|319745080|gb|EFV97406.1| protein-(glutamine-N5) methyltransferase [Streptococcus agalactiae ATCC 13813] Length = 276 Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 83/248 (33%), Positives = 126/248 (50%), Gaps = 12/248 (4%) Query: 18 SSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPE 77 S+ +++ +S + D + + N + KH S I G F ++ + PRPE Sbjct: 35 STTDYLLNQNSSVSDTDQQLMENIFQQLKKHRSPQYITGKAYFRDLIFFVDERVLIPRPE 94 Query: 78 TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137 TE LVD L S ++E +LD+GTG+GA+ ++L KE P + + DIS AL++A Sbjct: 95 TEELVD--LILSENKVED---CSVLDIGTGSGAIAISLKKERPSWDVLASDISVSALDLA 149 Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197 K NA N ++SD FS++ G FD+IVSNPPYI D +G V +P +L Sbjct: 150 KENA--NNCDAEVTFIESDVFSNISGKFDIIVSNPPYISYNDKDEVGKNVLASEPHSALF 207 Query: 198 GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN---AFKDYG 254 +GL+ YR I + +L G EIGY Q D+ + ++ F N KD Sbjct: 208 ADEEGLAIYRKIIENSREYLQPRGKLYFEIGYKQGDDLRSLL--KRYFPNNRCRVLKDIF 265 Query: 255 GNDRVLLF 262 G DR+++ Sbjct: 266 GKDRMVVL 273 >gi|257785107|ref|YP_003180324.1| modification methylase, HemK family [Atopobium parvulum DSM 20469] gi|257473614|gb|ACV51733.1| modification methylase, HemK family [Atopobium parvulum DSM 20469] Length = 297 Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 79/226 (34%), Positives = 117/226 (51%), Gaps = 10/226 (4%) Query: 10 FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69 L VTGLS Q+ + D L +R + AI R + E + + G F ++ LT Sbjct: 34 LLSAVTGLSRVQLYTNFDKPLSADERARMREAIKRRAEGEPLQYVTGEMPFRHLVLTCEP 93 Query: 70 DTFEPRPETELLVDSALA---FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126 PRPETE+LVD AL S P + VR+L++G GTG + L++ E P + Sbjct: 94 GVLIPRPETEVLVDVALEGVDASTPNADGE--VRVLEVGVGTGCISLSIATERPQTRVYA 151 Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG----LFDVIVSNPPYIE-SVIVD 181 D+S KA+ +A N + +R + ++ D V F V+VSNPPYI SV+ Sbjct: 152 TDLSPKAIALATRNRDALDLQDRVELIECDLVEGVPAELAQSFSVLVSNPPYIPTSVLEQ 211 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227 + EV+ F+P+++LDGG DGL YR + + R L G+ VE+ Sbjct: 212 EVPAEVKGFEPKLALDGGEDGLDVYRRLLEVAPRMLLPGGMLCVEL 257 >gi|323527483|ref|YP_004229636.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Burkholderia sp. CCGE1001] gi|323384485|gb|ADX56576.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Burkholderia sp. CCGE1001] Length = 295 Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 89/262 (33%), Positives = 136/262 (51%), Gaps = 15/262 (5%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDR--QRFFLTNAIVRSLKHESIHRILGWRDFYNV 63 ++ L V G Q+I D VLD +R+ A R + E + +I+G R+F+ + Sbjct: 34 EARILLTHVLGWRQTQLITRADEVLDGACVERYLALQA--RRVAGEPVAQIVGAREFFGL 91 Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 ++ PRPETELLV++AL ++ R+LDLGTGTGA+ +A+ P + Sbjct: 92 EFEVTPHVLIPRPETELLVETALTA----MQDLARPRVLDLGTGTGAIAVAIASMRPDAQ 147 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDT----LQSDWFSSVE-GL-FDVIVSNPPYIES 177 VD S +AL +A NA ++R QSDW+ +++ GL FDVIVSNPPYI S Sbjct: 148 VTAVDRSAEALAVAARNAARRLDAKRPGGAVIFAQSDWYGALDRGLCFDVIVSNPPYIAS 207 Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237 ++R ++PR +L DGLS R I G L+ G+ +E GY+Q V Sbjct: 208 GDPHLAQGDLR-YEPRGALTDEADGLSAIRAIVAGAPARLSSHGILWMEHGYDQAETVRT 266 Query: 238 IFESRKLFLVNAFKDYGGNDRV 259 + ++ V + +D G +R+ Sbjct: 267 LLTAQGFADVRSERDLAGIERI 288 >gi|258513429|ref|YP_003189651.1| modification methylase, HemK family [Desulfotomaculum acetoxidans DSM 771] gi|257777134|gb|ACV61028.1| modification methylase, HemK family [Desulfotomaculum acetoxidans DSM 771] Length = 289 Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 82/267 (30%), Positives = 138/267 (51%), Gaps = 17/267 (6%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L + G+ + + D VL + I R +K E + + G ++F + Sbjct: 25 DAEVLLMHLLGIERAGLYMRFDYVLTLEEAKAYRCLIERRVKGEPVAYLTGHKEFMGMDF 84 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKR--DVVRILDLGTGTGAVCLALLKESPFFK 123 ++ PRPETE+LV+ AL F +E + + + +LD+GTG+GA+ +++ + + + Sbjct: 85 IVNPAVLVPRPETEILVERALKF----LEGKPGEELLVLDIGTGSGAIAVSMARMNSRLR 140 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS-----SVEGLFDVIVSNPPYIESV 178 VD S AL +A+ NA +GV+ R D ++EG D+I +N PY+ S Sbjct: 141 VYAVDCSRDALVLAQHNAAIHGVAGRIHFFHGDLLYPLSNLALEGKADLIAANLPYVPSG 200 Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238 + L ++VR ++P+I+L+GG+DGL YR + G L GL +EIG Q DV+ + Sbjct: 201 DISGLPVDVRSYEPQIALNGGLDGLDIYRRLLPGAGDLLKSGGLLMLEIGPGQ-ADVL-V 258 Query: 239 FESRKLFLV----NAFKDYGGNDRVLL 261 E + +V DY G +RV+L Sbjct: 259 QEMTGMGMVWCCSEIVFDYAGRERVVL 285 >gi|227871846|ref|ZP_03990246.1| polypeptide chain release factor methyltransferase [Oribacterium sinus F0268] gi|227842304|gb|EEJ52534.1| polypeptide chain release factor methyltransferase [Oribacterium sinus F0268] Length = 346 Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 81/243 (33%), Positives = 123/243 (50%), Gaps = 34/243 (13%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALA-------------FSLPRIEKRD 97 + +ILG + FY + ++ D PR +TE LVD L +EK++ Sbjct: 99 LAQILGRQSFYGLDFFVNEDVLIPRADTECLVDLVLEDYADLAKQAGKTYAEKQNLEKQN 158 Query: 98 V-------------------VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAK 138 + ILDL TG+G + +++ K P+ + + VD+S KAL +AK Sbjct: 159 SEHVSNKHEDNVENGAISSSLNILDLCTGSGCIGISVAKHLPYQELLLVDLSEKALAVAK 218 Query: 139 SNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197 NA + + E LQSD ++V+G F +++SNPPYI S ++ L EV +++P+++LD Sbjct: 219 KNAEKH-LGENVRLLQSDLLTAVQGKKFSLLLSNPPYIVSRVIPGLEREVSEYEPKMALD 277 Query: 198 GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGND 257 GG DGL YR IA + L +EIGY+Q V IF+ V F D GN Sbjct: 278 GGEDGLLFYRRIAKEAKKVLLPGARLYLEIGYDQGESVKDIFQKEGYEAVEVFPDLSGNP 337 Query: 258 RVL 260 RV+ Sbjct: 338 RVV 340 >gi|299139886|ref|ZP_07033058.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Acidobacterium sp. MP5ACTX8] gi|298598240|gb|EFI54406.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Acidobacterium sp. MP5ACTX8] Length = 280 Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 80/266 (30%), Positives = 127/266 (47%), Gaps = 9/266 (3%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 RD+ + L V G ++ P+ LD Q R E + + G ++FY + Sbjct: 17 RDAETLLAHVLGHPRAWLLAHPEEELDAAQAETFLGLAARRAAGEPLQYLTGVQEFYGLS 76 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L ++ + PRPETE LV++ + ++ + R ++RI D+GTG+GA+ +AL Sbjct: 77 LRVTPEVLIPRPETEHLVEAVILWATQFHDGR-ILRIADVGTGSGAIAIALATHLAGVAL 135 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPPYIESV 178 V +D S AL +A+ NA G ER L++D + FD IVSNPPYI Sbjct: 136 VAIDQSEGALAVAEENAHALGCRERITFLRNDLLKDLSSALPHYPPFDAIVSNPPYIPLG 195 Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238 + +EV +P +L G DGL+ Y+ + L+ GL ++EIG+ Q+ + + Sbjct: 196 DAATMQVEVVQHEPHSALFAGDDGLAIYQRLIPQAHAALHPCGLLAMEIGFGQRPALEEL 255 Query: 239 FESRKLFLVNAFKDYGGNDRVLLFCR 264 V DY G R++L R Sbjct: 256 LVDWS--NVRFVDDYAGIPRIVLAER 279 >gi|292669719|ref|ZP_06603145.1| protein-(glutamine-N5) methyltransferase [Selenomonas noxia ATCC 43541] gi|292648516|gb|EFF66488.1| protein-(glutamine-N5) methyltransferase [Selenomonas noxia ATCC 43541] Length = 292 Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 81/259 (31%), Positives = 124/259 (47%), Gaps = 3/259 (1%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L V G + V D + R + H + +LG R+F + Sbjct: 30 DAEVLLSAVLGKDRTYLYVHFDEPIASAARTLFRSYAKERGAHVPLAYLLGRREFMGLEF 89 Query: 66 TLSSDTFEPRPETELLVDSALAF-SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 ++ DT PRP+TE+L A+ F R + D+GTGTGA+ L++L + Sbjct: 90 RVTRDTLIPRPDTEILAQFAVDFLRARRAAGASDLTAADIGTGTGAIALSVLHYTENTYA 149 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183 VDIS A + A+ NA G++ R + D + G +DVI+SNPPYI S ++ L Sbjct: 150 DAVDISPVAADTARENAERLGLTTRIEIHVGDLLVPLAGRTYDVILSNPPYIPSADIEGL 209 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR- 242 EVR ++PR++LDGG DGL YR + L G +VE+G D + + Sbjct: 210 MPEVRGYEPRLALDGGADGLVFYRRMMAEAPSMLKNGGAIAVEVGIGAAADAAALVAAHP 269 Query: 243 KLFLVNAFKDYGGNDRVLL 261 ++ +D GG DRV++ Sbjct: 270 RIVRTEILRDLGGIDRVVV 288 >gi|83591212|ref|YP_431221.1| HemK family modification methylase [Moorella thermoacetica ATCC 39073] gi|83574126|gb|ABC20678.1| [protein release factor]-glutamine N5-methyltransferase [Moorella thermoacetica ATCC 39073] Length = 283 Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 78/237 (32%), Positives = 123/237 (51%), Gaps = 19/237 (8%) Query: 35 RFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIE 94 RF+ AI R + + G ++F ++ ++ PR +TE++V++ L R++ Sbjct: 56 RFW--QAIDRRAAGYPLQYLTGHQEFMSLDFKVTPAVLIPRQDTEVVVEAVLE----RLD 109 Query: 95 KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154 + I D GTG+GA+ L+L P + DIS AL +A+ NA G++ R LQ Sbjct: 110 PCESYTIADCGTGSGAIALSLAHYLPRARVYATDISPAALTVAQENARKLGLAARVTLLQ 169 Query: 155 SDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213 D+ + + GL D +V+NPPYI + + L +VR +PR++LDGG DGL YR + G Sbjct: 170 GDFLAPLRGLKLDALVANPPYIPTAALPGLPADVRS-EPRLALDGGPDGLDAYRFLLPGA 228 Query: 214 SRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK------DYGGNDRVLLFCR 264 + L GL ++EIG +Q V + + V A++ DY G DR L R Sbjct: 229 AGLLRPGGLLALEIGSDQGQAVKDLARA-----VGAYRNEQVLPDYAGRDRCFLAYR 280 >gi|149377993|ref|ZP_01895718.1| hemK protein [Marinobacter algicola DG893] gi|149357702|gb|EDM46199.1| hemK protein [Marinobacter algicola DG893] Length = 282 Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 87/257 (33%), Positives = 123/257 (47%), Gaps = 9/257 (3%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L VTG S P+ LD + + + + + +LG ++F+++ L Sbjct: 27 DAELLLGFVTGWSRTTFRAWPERELDATLIARFSTLVEQRCEGHPVAHLLGEQEFWSLPL 86 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 ++ T PRP+TE LV++ALA LP +LDLGTGTGA+ LAL E ++ Sbjct: 87 KVNPSTLIPRPDTECLVEAALALDLPA-----NASVLDLGTGTGAIALALASERSGWQVS 141 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLG 184 D A+++A NA G+ QS+WFS + +FD+IVSNPPYI V Sbjct: 142 ACDAILAAVDLAIDNAARLGLP--VTVQQSNWFSDLPPAVFDLIVSNPPYIAGDDVHLGQ 199 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 +VR F+P +L G DGL R I L G +E GY Q V R+ Sbjct: 200 GDVR-FEPASALVAGRDGLDDIRLIVAEAPDWLVGGGWLILEHGYEQGAAVRRLLIEAGF 258 Query: 245 FLVNAFKDYGGNDRVLL 261 V +DYG DR L Sbjct: 259 ASVETGQDYGQRDRFTL 275 >gi|94500022|ref|ZP_01306557.1| modification methylase, HemK family protein [Oceanobacter sp. RED65] gi|94427880|gb|EAT12855.1| modification methylase, HemK family protein [Oceanobacter sp. RED65] Length = 281 Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 82/236 (34%), Positives = 120/236 (50%), Gaps = 10/236 (4%) Query: 27 DSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL 86 D+ L Q T + R + E + I+G F+++ + +S T PR +TE L+D + Sbjct: 47 DTELSQEQYLQFTQLLERRKQGEPVAYIIGQTGFWDLTIKVSPATLIPRGDTESLMDYIV 106 Query: 87 AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146 P+ +LDLGTGTGA+ LA KE P V VD+ +A+ +AK NA N V Sbjct: 107 EHFNPK-------NVLDLGTGTGALALATAKEYPQASVVAVDVIEEAVALAKENAKLNKV 159 Query: 147 SERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSH 205 + + LQSDWF+ V + FD+IVSNPPYI++ +VR ++P+ +L GL+ Sbjct: 160 T-NVEILQSDWFALVPKRRFDLIVSNPPYIDANDHHLGEGDVR-YEPKSALVAERHGLAD 217 Query: 206 YRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 I + L +DG VE GY+Q V IF + +D G DR L Sbjct: 218 IEKICNQALSFLTEDGCLMVEHGYDQGPHVRAIFSQSGFSNIETHQDLAGRDRFTL 273 >gi|27262484|gb|AAN87523.1| methyltransferase [Heliobacillus mobilis] Length = 319 Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 73/234 (31%), Positives = 116/234 (49%), Gaps = 23/234 (9%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALA------FSLPRIEKRDV------ 98 + I G ++F+ + L ++ PR +TELLV++AL P+ + + Sbjct: 78 LQYITGRQEFWGMELQVNPAVLIPRADTELLVEAALTSLKEKMAGFPKRQDKGCDDSPPA 137 Query: 99 --------VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150 + + D+GTG+GA+ LA+ KE + D+S +AL A+ NA NG+ R Sbjct: 138 QGSVAGKEIWLADVGTGSGAIALAMAKELRCVNVIATDLSPEALATARGNAERNGLGHRI 197 Query: 151 DTLQSDWFSSV--EGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207 + D V GL ++SNPPYI + + L EV F+PR++LDGG DGL YR Sbjct: 198 TFWEGDLLEPVIAAGLPLQAVLSNPPYIPTEDIGGLQREVAQFEPRLALDGGGDGLHLYR 257 Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 + + L GL ++EIG++Q V + V D+ G+DRV++ Sbjct: 258 RLIPQARKVLVPGGLIALEIGFDQGSSVAELMVQHGFVEVRVLPDFQGHDRVVM 311 >gi|162456339|ref|YP_001618706.1| putative methyltransferase HemK [Sorangium cellulosum 'So ce 56'] gi|161166921|emb|CAN98226.1| putative methyltransferase HemK [Sorangium cellulosum 'So ce 56'] Length = 294 Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 88/261 (33%), Positives = 137/261 (52%), Gaps = 14/261 (5%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L +V G+ +++D + LD + R E + +LG R+FY Sbjct: 37 DAELLLGKVLGIDRVGLLIDAERPLDRAELAAYRELHQRRRAGEPVAYLLGVREFYGRPF 96 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV---RILDLGTGTGAVCLALLKESPFF 122 + PRP+TE+LV+ ALA R + R+LDL TG+G V ++L E P Sbjct: 97 RVDPRVLIPRPDTEILVEVALA------RTRHLALSARVLDLCTGSGCVAISLACERPTS 150 Query: 123 KGVGVDISCKALEIAKSNAVTNG-VSERFDTLQSDWFSSV-EGL-FDVIVSNPPYIESVI 179 + +GVDIS AL +A+ NA+ G V+ F L+SD F+ V GL +D+I +NPPYI Sbjct: 151 RVLGVDISDGALAVARENALRLGAVNAGF--LRSDLFAGVPSGLRYDLITANPPYIPDED 208 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 V L +++R ++P ++L GG DGL R I G L G+ ++E+ + V +F Sbjct: 209 VAALQIDIRGYEPHLALAGGPDGLVFTRRIVAGAPALLAAGGVLAMEVEAGKAGAVAELF 268 Query: 240 ESRKLFLVNAFKDYGGNDRVL 260 + V+ DYGG++RV+ Sbjct: 269 TAAGFGGVSRHLDYGGHERVV 289 >gi|254253377|ref|ZP_04946695.1| Methylase [Burkholderia dolosa AUO158] gi|124895986|gb|EAY69866.1| Methylase [Burkholderia dolosa AUO158] Length = 280 Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 84/262 (32%), Positives = 126/262 (48%), Gaps = 15/262 (5%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDR--QRFFLTNAIVRSLKHESIHRILGWRDFYNV 63 D+ L G + Q+I D LD +R+ A R E + +++G R+F+ Sbjct: 19 DARVLLAHALGWTRTQLITRGDEPLDAAAIERYRALEA--RRAAGEPVAQLVGVREFFGR 76 Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 ++ D PRPETELLV++AL I+ +LDLGTG+GA+ +++ E P + Sbjct: 77 PFDVTPDVLIPRPETELLVEAALDA----IDGLPYPAVLDLGTGSGAIAVSIAAERPDAR 132 Query: 124 GVGVDISCKALEIAKSNAVTNGVSER----FDTLQSDWFSSVEG--LFDVIVSNPPYIES 177 +D S AL +A+ NA R LQSDW+++++ +FD IVSNPPYI Sbjct: 133 VWALDRSPAALAVARRNADKLLDPHRPGGPLHWLQSDWYTALDAAPVFDAIVSNPPYIAQ 192 Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237 ++R F+PR +L DGLS RTI G +L G +E GY+ V Sbjct: 193 HDPHLAQGDLR-FEPRGALTDDADGLSAIRTIVAGAGTYLKPGGTLWIEHGYDHAEAVRT 251 Query: 238 IFESRKLFLVNAFKDYGGNDRV 259 + S V + D +R Sbjct: 252 LLTSHGFVAVESLADLAAIERT 273 >gi|149019617|ref|ZP_01834936.1| HemK protein [Streptococcus pneumoniae SP23-BS72] gi|147930992|gb|EDK81972.1| HemK protein [Streptococcus pneumoniae SP23-BS72] Length = 279 Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 78/239 (32%), Positives = 119/239 (49%), Gaps = 16/239 (6%) Query: 28 SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALA 87 V + ++ F+ + + H+ I+G DFY + L + PRPETE LV+ L Sbjct: 46 EVTTEEEKQFVEDIYQQLAAHKPAQYIIGQADFYGMHLKVDERVLIPRPETEELVELILT 105 Query: 88 FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147 +L + +LD+GTG+GA+ LAL K P + D+S +AL++A NA + Sbjct: 106 ENL-----ETNLSVLDIGTGSGAIALALAKNRPDWSVTAADVSQEALDLASENAKNQNLQ 160 Query: 148 ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207 F +SD F+ + +D+IVSNPPYI +GL V +P ++L DGL+ Y Sbjct: 161 IFFK--KSDCFTEISEKYDIIVSNPPYISREDESEVGLNVLYSEPHLALFADEDGLAIYC 218 Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF-----ESRKLFLVNAFKDYGGNDRVLL 261 IA+ +L G +EIGY Q V +F E R V KD G +R+++ Sbjct: 219 RIAEDAKDYLKDGGKIYLEIGYKQGQSVPELFRKHLPEKR----VRTLKDQFGQNRMVV 273 >gi|37521324|ref|NP_924701.1| protoporphyrinogen oxidase [Gloeobacter violaceus PCC 7421] gi|35212321|dbj|BAC89696.1| protoporphyrinogen oxidase [Gloeobacter violaceus PCC 7421] Length = 286 Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 80/253 (31%), Positives = 132/253 (52%), Gaps = 12/253 (4%) Query: 14 VTGLSSHQV-IVDPDSVLDDRQRFFLTNAIVRSLKHES--IHRILGWRDFYNVRLTLSSD 70 VTGL +V + P ++ R++ A+ R E+ + +LG + +++L ++ Sbjct: 33 VTGLDRLRVRLGGPQALEAHREKL---AALWRRRIEEAMPLQYLLGTAHWRDLQLQVNPA 89 Query: 71 TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130 PRPE+E LVD A+ F R++DLGTG+GA+ +A+ + P VD S Sbjct: 90 VLIPRPESEALVDVAVDFC----RSCAGARVVDLGTGSGAIAVAVARALPGATVWAVDAS 145 Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRD 189 AL +A +N G+SE+ L+ +WF + FD ++SNPPYI S + L EVR Sbjct: 146 EAALVVAGANIERYGLSEQVHLLRGNWFVPLPTQPFDAVLSNPPYIPSAEIAALMPEVRL 205 Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF-LVN 248 +P +LDGG DGL R I +RHL G+ ++E+ Q VV++ + + Sbjct: 206 HEPLSALDGGSDGLDAVRQIIADAARHLRPGGILALEVMAGQGPTVVQLLARDSRYGCIR 265 Query: 249 AFKDYGGNDRVLL 261 +D+ G +R+++ Sbjct: 266 TVRDWAGIERIVV 278 >gi|312884084|ref|ZP_07743797.1| methylase of polypeptide chain release factor [Vibrio caribbenthicus ATCC BAA-2122] gi|309368254|gb|EFP95793.1| methylase of polypeptide chain release factor [Vibrio caribbenthicus ATCC BAA-2122] Length = 286 Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 91/261 (34%), Positives = 126/261 (48%), Gaps = 13/261 (4%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A D+ LC V ++ PD ++ + R E + I+G R+F++ Sbjct: 26 ATLDASVLLCHVLDRPRSYLMTWPDRTVESEVVNKFNELVKRRESGEPVAYIVGEREFWS 85 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR--ILDLGTGTGAVCLALLKESP 120 + L +SS T PRP+TE LV+ AL EK +V+ ILDLGTGTGA+ LAL E P Sbjct: 86 LNLKVSSSTLIPRPDTERLVELAL-------EKSTLVKGDILDLGTGTGAIALALASELP 138 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESV 178 GVD+ +A IA+ NA + + L WF + + F +IVSNPPYIES Sbjct: 139 DRNVWGVDLKQEAQHIAQDNAERLSI-KNAQFLFGSWFEPLDHDAKFALIVSNPPYIESD 197 Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238 +VR F+P +L GL+ IA HL + G E G +Q V + Sbjct: 198 DPHLSEGDVR-FEPLSALVSEKQGLADIEVIAKQAPEHLLEGGWLLFEHGLDQGEPVRTL 256 Query: 239 FESRKLFLVNAFKDYGGNDRV 259 E+ V F+DYG DRV Sbjct: 257 LETLGYDQVETFQDYGHRDRV 277 >gi|153956300|ref|YP_001397065.1| methyltransferase [Clostridium kluyveri DSM 555] gi|219856617|ref|YP_002473739.1| hypothetical protein CKR_3274 [Clostridium kluyveri NBRC 12016] gi|146349158|gb|EDK35694.1| Predicted methyltransferase [Clostridium kluyveri DSM 555] gi|219570341|dbj|BAH08325.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 288 Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 74/214 (34%), Positives = 111/214 (51%), Gaps = 8/214 (3%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110 + ILG +F + + PRP+TE LV++AL I+ + I DL GTGA Sbjct: 74 VKYILGQCEFMGMDFIVKPGVLIPRPDTETLVENALE----EIDNNEFYNICDLCCGTGA 129 Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAV-TNGVSERFDTLQSD---WFSSVEGLFD 166 + ++L K V DIS A E+A+ N +++R ++SD +F + F+ Sbjct: 130 IGISLAKFVEHINVVCCDISDTACEVAEQNVRRYYSLNKRISIVKSDLMEYFILNKIKFN 189 Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE 226 +IV NPPYI+ ++D L +V++++P +L GG DGL YR I + L K+G+ E Sbjct: 190 MIVCNPPYIKESVIDTLMEDVKNYEPHEALSGGEDGLEFYRKIVKQSLKVLTKNGMLMFE 249 Query: 227 IGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 IGY+QK DV I KD G DRV+ Sbjct: 250 IGYDQKKDVTSILMKYGFKNTTCIKDLAGKDRVI 283 >gi|326386587|ref|ZP_08208209.1| HemK family modification methylase [Novosphingobium nitrogenifigens DSM 19370] gi|326208902|gb|EGD59697.1| HemK family modification methylase [Novosphingobium nitrogenifigens DSM 19370] Length = 282 Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 72/224 (32%), Positives = 116/224 (51%), Gaps = 13/224 (5%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA-LAFSLPRIEKRDVVR 100 + R + HE + I G ++F+ + + + PR +TE LV++A AF+ R R Sbjct: 63 VARRMTHEPVAYITGHQEFWGLDFLVGPEVLIPRGDTETLVEAAETAFT-----ARPPQR 117 Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 I+DLGTG+GA+ A L P +G+G+D S AL +A++NA G+ +R + +DW + Sbjct: 118 IIDLGTGSGALLCAALSIWPGAQGIGIDRSQGALAMARANANRLGLGQRARIIAADWHTP 177 Query: 161 VE----GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216 G FD++++NPPY+E+ L V D +P +L G +GL YR + + Sbjct: 178 GWARDLGRFDLVLANPPYVETSA--DLDRSVVDHEPHSALFAGAEGLDDYRVLVPQLGDL 235 Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 L DG+ +EIG+ Q + V + F D GG R + Sbjct: 236 LAPDGIAMIEIGWTQG-EAVCALARQGGFAAQVHTDLGGRPRAV 278 >gi|325689727|gb|EGD31731.1| protein-(glutamine-N5) methyltransferase [Streptococcus sanguinis SK115] Length = 276 Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 76/218 (34%), Positives = 113/218 (51%), Gaps = 12/218 (5%) Query: 46 LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLG 105 L H+ I+G DF+ + L + PRPETE LV+ L+ + + +LD+G Sbjct: 63 LAHKPAQYIIGSSDFHGLTLKVDERVLIPRPETEELVELILSEN-----PESSLSVLDIG 117 Query: 106 TGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF 165 TG+GA+ L L P ++ D+S AL +A NA ++ F +QSD +++G F Sbjct: 118 TGSGAIALTLANSRPDWQITASDLSNDALALAAENAQFCRLNLAF--VQSDCLDAIQGKF 175 Query: 166 DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225 D+IVSNPPYI D +GL V +P ++L DG + YR IA+ +L K G + Sbjct: 176 DIIVSNPPYISEADKDEVGLNVLTSEPHMALFAEEDGYAVYRKIAEQAGDYLTKKGKIYL 235 Query: 226 EIGYNQKVDVVRIFESRKLF---LVNAFKDYGGNDRVL 260 EIGY Q V + +K F + KD G DR++ Sbjct: 236 EIGYKQGDGVADLL--KKSFPQKRIRVLKDQFGKDRMV 271 >gi|190570979|ref|YP_001975337.1| modification methylase, HemK family [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|213019495|ref|ZP_03335301.1| modification methylase, HemK family [Wolbachia endosymbiont of Culex quinquefasciatus JHB] gi|190357251|emb|CAQ54673.1| modification methylase, HemK family [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|212994917|gb|EEB55559.1| modification methylase, HemK family [Wolbachia endosymbiont of Culex quinquefasciatus JHB] Length = 283 Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 64/181 (35%), Positives = 104/181 (57%), Gaps = 5/181 (2%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110 I +I+G R+F++ ++ +PRP++E ++ + L + K+ ++I D GTGTG Sbjct: 71 ISQIIGNREFWSKNFIVNQHVLDPRPDSETVISTVLKYYQ---NKKQKIKIADFGTGTGC 127 Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170 + +++L E + GVG + S +A +I N + + R + W LFD+I+S Sbjct: 128 LLISVLSEYEYAIGVGFEKSLEAYKITYQNTKKHNLLNRAKIFPNSWIE-CRDLFDLIIS 186 Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230 NPPYI+ + L EV+ +PRI+LDGGIDGLS Y +I + + L KDG +EIG + Sbjct: 187 NPPYIKRSKLKDLQAEVQK-EPRIALDGGIDGLSCYLSIFPILKKCLKKDGFAILEIGED 245 Query: 231 Q 231 Q Sbjct: 246 Q 246 >gi|78187349|ref|YP_375392.1| modification methylase HemK [Chlorobium luteolum DSM 273] gi|78167251|gb|ABB24349.1| Modification methylase HemK [Chlorobium luteolum DSM 273] Length = 296 Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 82/251 (32%), Positives = 123/251 (49%), Gaps = 20/251 (7%) Query: 19 SHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPET 78 H+ V PD + +RF + L + I G + FY + + PRPET Sbjct: 51 QHERPVYPDEL----ERF--RELCRQRLGGRPLQYITGEQWFYGLPFHVDRRVLIPRPET 104 Query: 79 ELLVDSALAFSLPRIEK-----RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133 ELLV+ F+L +E V RILD GTG+G + L + P + VG+D+S +A Sbjct: 105 ELLVE----FALELLESDGASASGVPRILDAGTGSGCIALTMAIRMPTLQAVGIDVSLEA 160 Query: 134 LEIAKSNAVTNGVSERFDTLQSDW----FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRD 189 LE+A++NA +G +R D FS FD++VSNPPYI L EVRD Sbjct: 161 LEVARTNAERHGAGDRVSFAVGDMTDPLFSPPGAPFDMLVSNPPYIPESEWAGLQPEVRD 220 Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249 +P+++L + G+ YR +A R L G ++EI + VV + E + + Sbjct: 221 HEPKLALTVPV-GMECYRALAAMAGRLLRPGGRIALEIHADGAGGVVELLEEAGMLDIVV 279 Query: 250 FKDYGGNDRVL 260 KDY G +R++ Sbjct: 280 KKDYAGLNRIV 290 >gi|119897273|ref|YP_932486.1| HemK protein [Azoarcus sp. BH72] gi|119669686|emb|CAL93599.1| HemK protein [Azoarcus sp. BH72] Length = 278 Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 82/257 (31%), Positives = 128/257 (49%), Gaps = 12/257 (4%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L + +++ P+ L + + + R ++ E + ++G R+FY Sbjct: 22 DARVLLRYALACPASRLVAWPEQRLSAEEWENFSRLVERRVEGEPVAYLIGEREFYGRSF 81 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 ++ PRP+TELLV+ A+A + VR+LDLGTG+GA+ + L E Sbjct: 82 AVTPAVLIPRPDTELLVELAVA----HFSAQQRVRVLDLGTGSGALAITLALELDAADVT 137 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLG 184 +D S +AL +A +NA G S F +QSDWF ++ E F +IV+NPPYI + D Sbjct: 138 ALDRSREALWVAMANAARLGASVSF--VQSDWFDALGEERFQLIVANPPYIAA---DDAH 192 Query: 185 LEVRD--FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 LE D F+PR +L G GL IA HL G +E GY+Q + V + Sbjct: 193 LEEGDLRFEPRSALAAGTAGLDDLSEIAAAAPAHLEAGGWLFLEHGYDQAMSVRGLLADA 252 Query: 243 KLFLVNAFKDYGGNDRV 259 ++++KD G +RV Sbjct: 253 GFAAISSWKDLAGIERV 269 >gi|268595711|ref|ZP_06129878.1| conserved hypothetical protein [Neisseria gonorrhoeae 35/02] gi|268549100|gb|EEZ44518.1| conserved hypothetical protein [Neisseria gonorrhoeae 35/02] gi|317165196|gb|ADV08737.1| HemK [Neisseria gonorrhoeae TCDC-NG08107] Length = 295 Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 84/221 (38%), Positives = 113/221 (51%), Gaps = 12/221 (5%) Query: 44 RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103 R L E + ILG R+FY R T++ + PRPETE LV++ LA LP + R+ D Sbjct: 76 RRLNGEPVAYILGVREFYGRRFTVNPNVLIPRPETEHLVEAVLA-RLP-----ENGRVWD 129 Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS--- 160 LGTG+GAV + + E P DIS ALE A+ NA G R + WF + Sbjct: 130 LGTGSGAVAVTVALERPDAFVRASDISTPALETARKNAADLGA--RVEFAHGSWFDTDMP 187 Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220 E +D+IVSNPPYIE+ ++R F+P+I+L DGLS RT+A G L + Sbjct: 188 SERQWDIIVSNPPYIENGDKHLSQGDLR-FEPQIALTDFSDGLSCIRTLAQGAPDRLAEG 246 Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 G +E G++Q V + V D G DRV L Sbjct: 247 GFLLLEHGFDQGAAVRGVLAENGFSGVEILPDLVGLDRVTL 287 >gi|28378949|ref|NP_785841.1| protoporphyrinogen oxidase (putative) [Lactobacillus plantarum WCFS1] gi|300766722|ref|ZP_07076639.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308181159|ref|YP_003925287.1| protoporphyrinogen oxidase (putative) [Lactobacillus plantarum subsp. plantarum ST-III] gi|28271786|emb|CAD64692.1| protoporphyrinogen oxidase (putative) [Lactobacillus plantarum WCFS1] gi|300495822|gb|EFK30973.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308046650|gb|ADN99193.1| protoporphyrinogen oxidase (putative) [Lactobacillus plantarum subsp. plantarum ST-III] Length = 288 Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 77/223 (34%), Positives = 116/223 (52%), Gaps = 8/223 (3%) Query: 40 NAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV 99 I R + E + +LG FY + L + PR ETE LVD + L + V Sbjct: 63 QGIDRVVAGEPVQYVLGDAPFYGLTLQVDPAVLIPRVETEELVD----WILTDVPATAPV 118 Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+LD+GTG+GA+ LA+ E P ++ DIS AL++AK+NA + + + SD + Sbjct: 119 RLLDVGTGSGAIALAIKHERPAWEITASDISTAALQVAKANA--DRLHLDVKLVHSDLLT 176 Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 SV FD+IVSNPPYI + D + V +P+ +L DGL+ Y +A V+ HL Sbjct: 177 SVSAQPFDIIVSNPPYIAASEKDVMDASVLAHEPQTALFADHDGLALYEQLATTVADHLT 236 Query: 219 KDGLCSVEIGYNQKVDVVRIF-ESRKLFLVNAFKDYGGNDRVL 260 G +E GY+Q + +F +S V +D G++R+L Sbjct: 237 STGRLYLEFGYHQGPALQTLFAQSMPDATVTLRQDMAGHNRML 279 >gi|83816659|ref|YP_446173.1| hemK protein [Salinibacter ruber DSM 13855] gi|294508099|ref|YP_003572157.1| protein methyltransferase [Salinibacter ruber M8] gi|83758053|gb|ABC46166.1| hemK protein [Salinibacter ruber DSM 13855] gi|294344427|emb|CBH25205.1| Protein methyltransferase [Salinibacter ruber M8] Length = 303 Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 78/224 (34%), Positives = 114/224 (50%), Gaps = 11/224 (4%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101 + R ++ E + ILG+ FY +RL +S D PRPETE +VD AL IE+ R+ Sbjct: 76 VGRRVQGEPLQHILGYASFYGLRLRVSPDVMVPRPETETVVDRALTC----IEEVSRPRV 131 Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 LD GTG+G + LAL E P + D+S AL +A++NA G+ RF + D + V Sbjct: 132 LDAGTGSGCIALALKHERPDAEVHACDVSTDALAVARANAQDLGLDVRF--FEGDLCAEV 189 Query: 162 EGL----FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217 D++VSNPPYI + L VR++DP SL G D L YR + VS Sbjct: 190 PAATPRDVDLLVSNPPYIPDAEAESLPPVVREYDPDRSLFAGRDPLRFYRALVRWVSACC 249 Query: 218 NKDGLCSVEIGYNQKVDVVRIFESRK-LFLVNAFKDYGGNDRVL 260 G +E+ +V R+F + + V+ +D G R++ Sbjct: 250 VPGGSFVLEVHAEHAAEVERLFRGEEGVGAVHTEEDLSGRPRIV 293 >gi|294055590|ref|YP_003549248.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Coraliomargarita akajimensis DSM 45221] gi|293614923|gb|ADE55078.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Coraliomargarita akajimensis DSM 45221] Length = 280 Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 83/260 (31%), Positives = 124/260 (47%), Gaps = 8/260 (3%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ + G+ + +D + L D Q L + R E + ILG +F + L Sbjct: 26 DTDLLIAHSLGIKRLDIYLDLERPLTDAQLDDLRPLVKRRASREPLQYILGSVEFAGLEL 85 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 PRPETE LV+ + R+++ ILDLGTGTGA+ LAL K Sbjct: 86 KTDVRALIPRPETEELVE----LLVQRLQRAPTC-ILDLGTGTGALALALAKRYSDAAVT 140 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVDCL 183 VD+S +AL +A NA S+R L+ WF + FD+IVSNPPY+ + Sbjct: 141 AVDLSAEALTLAAENAEALDFSDRVRLLEGSWFVPLPESERFDLIVSNPPYLTEEEMTTA 200 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 EV ++P +L G+DGL RTI LN+ GL +VE G +Q +++++ + Sbjct: 201 EPEVVGYEPHSALVSGVDGLDDLRTIFAEAKERLNEGGLFAVETGISQHDELLKMAKQGG 260 Query: 244 LFLVNAFKDYGGNDRVLLFC 263 + +D G R +FC Sbjct: 261 FEHAESVEDLSGRSR-FVFC 279 >gi|307823418|ref|ZP_07653647.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Methylobacter tundripaludum SV96] gi|307735403|gb|EFO06251.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Methylobacter tundripaludum SV96] Length = 284 Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 80/258 (31%), Positives = 121/258 (46%), Gaps = 7/258 (2%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 AL D+ LC+ + PD L + + + I I G R+F++ Sbjct: 22 ALLDAEILLCQALNQPRSHLRAWPDKPLLPEHLAAFRALLEQRQQGIPIAYITGNREFWS 81 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 +S D PRP+TELL++ SL I D V+I+DLGTG+G + + L E P Sbjct: 82 RDFQVSPDVLIPRPDTELLIE----LSLKLIPADDPVKIIDLGTGSGIIAITLAAERPHA 137 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181 + D S AL IA+ NA + ++ QS+WF+ V F++++SNPPYI Sbjct: 138 QISATDFSLAALRIARLNADKHHIN-TIQFYQSNWFADVPATQFNLVISNPPYIAEDDSH 196 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P+ +L GL + IAD +L G +E GY+Q+ V +F+ Sbjct: 197 LQQGDVR-FEPQTALCAAEQGLGDIKIIADAARNYLEPRGHLLIEHGYDQQQQVQTLFKD 255 Query: 242 RKLFLVNAFKDYGGNDRV 259 V + D G RV Sbjct: 256 LHYDNVQTYTDLSGQPRV 273 >gi|58698720|ref|ZP_00373607.1| modification methylase, HemK family [Wolbachia endosymbiont of Drosophila ananassae] gi|58534756|gb|EAL58868.1| modification methylase, HemK family [Wolbachia endosymbiont of Drosophila ananassae] Length = 229 Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 70/211 (33%), Positives = 119/211 (56%), Gaps = 6/211 (2%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110 I +I+G R+F++ ++ +PRP++E L+ + L + P ++R ++I D GTGTG Sbjct: 16 ISQIIGNREFWSKNFIVNQHVLDPRPDSETLISTVLKY-YPNKKQR--LKIADFGTGTGC 72 Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170 + +++L E + GVG + S +A ++A N + + R S W + LFD+I+S Sbjct: 73 LLISVLSEYKYAVGVGFEKSLEAYKVAYQNTKKHDLLSRAKIFPSSWIECSD-LFDLIIS 131 Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230 NPPYI+ + L EV+ +P+ +LDGGIDGL+ Y +I + R L K+G +EIG + Sbjct: 132 NPPYIKRSKLKDLQAEVQK-EPKTALDGGIDGLNCYLSIFPILRRCLKKNGFAILEIGED 190 Query: 231 QKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 Q ++ +I S +L D G R ++ Sbjct: 191 QS-NIDKIIPSYELAFQEYVYDLAGMKRCIV 220 >gi|148244860|ref|YP_001219554.1| protein methyltransferase HemK [Candidatus Vesicomyosocius okutanii HA] gi|146326687|dbj|BAF61830.1| protein methyltransferase HemK [Candidatus Vesicomyosocius okutanii HA] Length = 270 Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 67/207 (32%), Positives = 109/207 (52%), Gaps = 14/207 (6%) Query: 56 GWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL 115 G + FY++ ++ DT PRPETELL+D AL + +LDLGTG+G + + + Sbjct: 72 GTKGFYHLDFKVTPDTLIPRPETELLIDIALGL----FNQNQTYEVLDLGTGSGVIAITI 127 Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPY 174 ++P + D S AL +AK N TN + WF + FD+I+SNPPY Sbjct: 128 SDKNPNWNLTATDFSINALAVAKQNTKTN-----INFQLGSWFEATPNQTFDLIISNPPY 182 Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234 I+ + + L F+P+ +L G DGL + I + + + LN+ G +E G+NQ+ Sbjct: 183 IKQ---NDIHLNELRFEPQSALISGKDGLDDIQIIINNIPKFLNEKGYLLLEHGFNQQQK 239 Query: 235 VVRIFESRKLFLVNAFKDYGGNDRVLL 261 ++++ + F + FKDY +R +L Sbjct: 240 IIQLLKDN-FFNIKKFKDYNQKNRAIL 265 >gi|239999900|ref|ZP_04719824.1| HemK [Neisseria gonorrhoeae 35/02] Length = 273 Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 84/221 (38%), Positives = 113/221 (51%), Gaps = 12/221 (5%) Query: 44 RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103 R L E + ILG R+FY R T++ + PRPETE LV++ LA LP + R+ D Sbjct: 54 RRLNGEPVAYILGVREFYGRRFTVNPNVLIPRPETEHLVEAVLA-RLP-----ENGRVWD 107 Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS--- 160 LGTG+GAV + + E P DIS ALE A+ NA G R + WF + Sbjct: 108 LGTGSGAVAVTVALERPDAFVRASDISTPALETARKNAADLGA--RVEFAHGSWFDTDMP 165 Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220 E +D+IVSNPPYIE+ ++R F+P+I+L DGLS RT+A G L + Sbjct: 166 SERQWDIIVSNPPYIENGDKHLSQGDLR-FEPQIALTDFSDGLSCIRTLAQGAPDRLAEG 224 Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 G +E G++Q V + V D G DRV L Sbjct: 225 GFLLLEHGFDQGAAVRGVLAENGFSGVEILPDLVGLDRVTL 265 >gi|218133362|ref|ZP_03462166.1| hypothetical protein BACPEC_01227 [Bacteroides pectinophilus ATCC 43243] gi|217992235|gb|EEC58239.1| hypothetical protein BACPEC_01227 [Bacteroides pectinophilus ATCC 43243] Length = 289 Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 93/269 (34%), Positives = 134/269 (49%), Gaps = 17/269 (6%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVD-PDSVLDD-RQRFFLTNAIV-RSLKHESIHRILGWRD 59 A DS + L +TG+ I++ SV +D +R+ +A++ R H + I G Sbjct: 30 AEYDSFALLEYITGMDRTAYILNGSKSVPEDIAERY---DAVIDRRSSHIPLQHITGQAW 86 Query: 60 FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119 FY ++SD PR +TE+LV AL I +D V LD+ TG+G + + L E Sbjct: 87 FYGRGFNVNSDVLVPRQDTEVLVSEALKV----INAKDSV--LDMCTGSGCIIITLALEK 140 Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV----EGLFDVIVSNPPYI 175 + +G DIS AL++A N G ++ ++S+ FS + + LFDVIVSNPPYI Sbjct: 141 KLGRALGADISEAALKVASGNREKLG-ADDVTFVKSNIFSDINVNDDELFDVIVSNPPYI 199 Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235 + ++ L EVR DP I+LDG DGL YR I ++ G EIG Q DV Sbjct: 200 ATGEIETLTEEVRIHDPYIALDGLEDGLHFYREITQQSMNYIKSGGWLLYEIGCTQAHDV 259 Query: 236 VRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 I + KD G DRV++ R Sbjct: 260 SDIMSEYGYSNIKVIKDLAGLDRVVMGQR 288 >gi|307131077|ref|YP_003883093.1| release factors RF-1 and RF-2 N5-glutamine methyltransferase [Dickeya dadantii 3937] gi|306528606|gb|ADM98536.1| release factors RF-1 and RF-2 N5-glutamine methyltransferase [Dickeya dadantii 3937] Length = 283 Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 91/259 (35%), Positives = 130/259 (50%), Gaps = 10/259 (3%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 RD+ L VTG ++ ++ L D + L + R E I ++G R+F+++ Sbjct: 22 RDAEILLEHVTGKGRTFLLAFGETELTDGEGSALAALLARRATGEPIAYLVGHREFWSLS 81 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L +S T PRP+TE LV+ ALA LP +LDLGTGTGA+ LA+ E P + Sbjct: 82 LAVSPATLIPRPDTECLVEHALAH-LP----AGASSVLDLGTGTGAIALAIAHERPDCQV 136 Query: 125 VGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDC 182 VG+D A+ +A NA G++ RF L DWFS ++G F +IVSNPPYI+ Sbjct: 137 VGIDRQPDAVALASHNASQLGIANARF--LPGDWFSPLDGQRFSLIVSNPPYIDEHDPHL 194 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 +VR F+P +L GL+ R I L G +E G+ Q V + Sbjct: 195 SRGDVR-FEPASALVAREAGLADLRQIIRQAGGFLLDSGWLLLEHGWQQGDAVRSLLTQY 253 Query: 243 KLFLVNAFKDYGGNDRVLL 261 V ++DYG N+RV L Sbjct: 254 GFVQVKTYRDYGDNERVTL 272 >gi|90407673|ref|ZP_01215853.1| Methylase of polypeptide chain release factor [Psychromonas sp. CNPT3] gi|90311264|gb|EAS39369.1| Methylase of polypeptide chain release factor [Psychromonas sp. CNPT3] Length = 277 Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 83/257 (32%), Positives = 124/257 (48%), Gaps = 8/257 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 AL D+ LC V S ++ P+ +L D Q+ I +K + + G R+F++ Sbjct: 20 ALLDAQVLLCFVLQKESVYLMTWPERLLTDMQKEAYKALIDERIKGVPVAYLTGTREFWS 79 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + +++ T PR +TE LV+ AL P ILDLGTGTGA+ LAL E P Sbjct: 80 LPFKVNASTLIPRADTETLVEYALQVCSPN------SHILDLGTGTGAIILALASELPHA 133 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182 + VD + A+++A N + + + QSDWFS V G FD+IVSNPPYI+ Sbjct: 134 QCSAVDFNADAVQLAIENRQALKL-DNVNIYQSDWFSQVHGRFDLIVSNPPYIDKEDHHL 192 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 +VR F+P +L GL+ I +L +G +E G+ Q V IF Sbjct: 193 AEGDVR-FEPLSALVADDKGLADIHLIVSQARLYLKTNGTLMIEHGFEQGEAVRNIFRLF 251 Query: 243 KLFLVNAFKDYGGNDRV 259 + + D N+R+ Sbjct: 252 EFDEIRTECDLARNERI 268 >gi|238899146|ref|YP_002924828.1| N5-glutamine methyltransferase, modifies release factors RF-1 and RF-2 [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|229466906|gb|ACQ68680.1| N5-glutamine methyltransferase, modifies release factors RF-1 and RF-2 [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 285 Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 81/255 (31%), Positives = 131/255 (51%), Gaps = 7/255 (2%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 RD+ L VTG ++ ++ L ++ L + R + E I ++G R+F+++ Sbjct: 22 RDAEILLGYVTGKPRSVLLGFGETKLTVEEQASLEIIVQRRAQGEPIAYLIGEREFWSLP 81 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 +++S T PRP+TE LV+ AL +P R R+LDLGTGTG + LAL E Sbjct: 82 ISVSPVTLIPRPDTECLVEQALKH-IP----RGASRVLDLGTGTGCIALALGHERSDCTI 136 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184 +G DI + +++A NA G+ Q +WFS+V G F VIVSNPPYI++ Sbjct: 137 IGTDIKEETIKLASHNAKKLGLP-HLSFFQGNWFSAVNGYFSVIVSNPPYIDAEDPHLNK 195 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 ++R ++P +L +GL+ + I +L G +E G+ Q + +F Sbjct: 196 GDLR-YEPLSALVSADEGLADVKHIIRESPHYLTSCGWLLLEHGWQQSDKIQTLFYQTGF 254 Query: 245 FLVNAFKDYGGNDRV 259 V+ ++D GG+ RV Sbjct: 255 SSVSTYRDDGGHPRV 269 >gi|67921948|ref|ZP_00515464.1| Modification methylase HemK [Crocosphaera watsonii WH 8501] gi|67856164|gb|EAM51407.1| Modification methylase HemK [Crocosphaera watsonii WH 8501] Length = 301 Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 77/217 (35%), Positives = 111/217 (51%), Gaps = 10/217 (4%) Query: 54 ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV--RILDLGTGTGAV 111 I WR F L +S D PRPETEL++D A+ + + D++ LDLGTG+GA+ Sbjct: 88 ITPWRRF---SLKVSPDVLIPRPETELIIDFAVE-AAKQSPNPDLMFGHWLDLGTGSGAI 143 Query: 112 CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVI 168 L L P VD S KAL IA+ NA+ G S R + Q W++ +E G + Sbjct: 144 ALGLGDSFPQATIHAVDTSSKALTIAQENAIQAGFSHRINFYQGSWWTPLEQLKGQVSAM 203 Query: 169 VSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228 VSNPPYI + ++ L EV++ +P ++LDGG DGL R + D +L G+ VE+ Sbjct: 204 VSNPPYIPTSLLSELQPEVQEHEPILALDGGNDGLEAIRYLIDTSPDYLVSGGIFLVEMM 263 Query: 229 YNQKVDVVRIFESRKLFL-VNAFKDYGGNDRVLLFCR 264 Q V ++ E+ + + D G R L R Sbjct: 264 AGQGETVRQLLETSGHYQSIQTLPDLAGISRFALAYR 300 >gi|225027776|ref|ZP_03716968.1| hypothetical protein EUBHAL_02035 [Eubacterium hallii DSM 3353] gi|224954922|gb|EEG36131.1| hypothetical protein EUBHAL_02035 [Eubacterium hallii DSM 3353] Length = 297 Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 82/270 (30%), Positives = 130/270 (48%), Gaps = 31/270 (11%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D F G +++ + +SVL R++ + ++G +F Sbjct: 37 DRAEFYMNPNGEVKEELLAELESVLKQREQRV------------PLQYLMGECEFMGYDF 84 Query: 66 TLSSDTFEPRPETELLVDSALA-----FSLPRIEKRDV--------VRILDLGTGTGAVC 112 + PR +TE LV+ A+ + R E + V++LDL TG+G + Sbjct: 85 YVDERVLIPRQDTECLVELAVEDIRNRKTQNRCESNNTADQKNEQKVKVLDLCTGSGCIG 144 Query: 113 LALLKESPFFKGVGVDISCKALEIAKSNA--VTNGVSERFDTLQSDWFSSVEGLFDVIVS 170 +++ K P + DIS AL +AK NA + GV+ ++ + F ++EG FD I+S Sbjct: 145 ISVAKLCPDTEVTLADISEGALSVAKKNAQNLDAGVT----LIKGNLFENIEGRFDYILS 200 Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230 NPPYI S +++ L EV++ +PR++LDG DGLS YR I + +LN DG EIG Sbjct: 201 NPPYIPSEVIEGLMPEVKEHEPRLALDGEADGLSFYREIINEAPDYLNPDGRIYFEIGAE 260 Query: 231 QKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 Q D+ + R V KD G DR++ Sbjct: 261 QGEDLTHLMNERGFSEVKVHKDLAGLDRIV 290 >gi|332361224|gb|EGJ39028.1| protein-(glutamine-N5) methyltransferase [Streptococcus sanguinis SK1056] Length = 276 Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 76/216 (35%), Positives = 110/216 (50%), Gaps = 8/216 (3%) Query: 46 LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLG 105 L H I G DF + L + PRPETE LV+ L+ + + +LD+G Sbjct: 63 LAHRPAQYINGRSDFLGLSLKVDERVLIPRPETEELVELILSEN-----PESSLSVLDIG 117 Query: 106 TGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF 165 TG+GA+ LAL ++ D+S AL +A+ NA + +S F +QSD F ++ G F Sbjct: 118 TGSGAIALALANSRSDWQITASDLSGDALALAEENAQSCNLSLTF--VQSDCFEAISGSF 175 Query: 166 DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225 D+IVSNPPYI D +GL V +P ++L DG + YR IA+ +L + G + Sbjct: 176 DIIVSNPPYISEADKDEVGLNVLTSEPHMALFAEEDGYAVYRKIAEQAGDYLTEKGKIYL 235 Query: 226 EIGYNQKVDVVRIFESR-KLFLVNAFKDYGGNDRVL 260 EIGY Q V + E + KD G DR++ Sbjct: 236 EIGYKQGDGVRELLEKNFPQKRIRVLKDQFGKDRMV 271 >gi|241759168|ref|ZP_04757276.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Neisseria flavescens SK114] gi|241320587|gb|EER56864.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Neisseria flavescens SK114] Length = 270 Score = 116 bits (290), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 86/259 (33%), Positives = 121/259 (46%), Gaps = 12/259 (4%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 ++ L +G + Q++ + D R R LK E + +LG R+FY R Sbjct: 16 EARMLLKYASGYTRVQLLTRGGEEIPDEVRQRADRLAQRRLKGEPMAYLLGEREFYGRRF 75 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 ++ PRPETE LV++ L P+ R+ DLGTG+GA+ + + E Sbjct: 76 AVNPHVLIPRPETEHLVEAVLKRLPPQ------GRVWDLGTGSGAIAVTVALERVDADVR 129 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS---VEGLFDVIVSNPPYIESVIVDC 182 DIS AL+ A+ NA G F Q WF + EG +DVIVSNPPYIE+ Sbjct: 130 ASDISTGALDTARQNAAELGAKVEF--AQGSWFDTDRPSEGRYDVIVSNPPYIENGDEHL 187 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 ++R F+P+ +L DGLSH R I ++L +G E GY+Q V I Sbjct: 188 SQGDLR-FEPQNALTDFSDGLSHIRHITQEAPKYLKANGWLLFEHGYDQGEAVRNIMLKN 246 Query: 243 KLFLVNAFKDYGGNDRVLL 261 V +D G DRV L Sbjct: 247 GFAEVATEQDLAGLDRVTL 265 >gi|302384869|ref|YP_003820691.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Clostridium saccharolyticum WM1] gi|302195497|gb|ADL03068.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Clostridium saccharolyticum WM1] Length = 288 Score = 116 bits (290), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 75/212 (35%), Positives = 112/212 (52%), Gaps = 7/212 (3%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110 +H+I G R+F + ++ PR +TE LV+ L + K + +ILDL TG+G Sbjct: 77 LHQITGSREFMGLDFEVNEHVLIPRQDTETLVELVL-----KDYKGKMPKILDLCTGSGC 131 Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVI 168 + ++L K F + DIS +AL +A+ NA + R ++SD F + + FDVI Sbjct: 132 IAISLAKLGGFDRVTAADISEEALLVAERNAGKHLGEGRITLVKSDLFEAFKNQRTFDVI 191 Query: 169 VSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228 VSNPPYI + I++ L EVRD +P ++LDG DGL YR +A H+ G EIG Sbjct: 192 VSNPPYIPTKIIEGLQPEVRDHEPMLALDGKEDGLYFYRILALESRSHMVLGGAVYFEIG 251 Query: 229 YNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 Y+Q V + + + D G DRV+ Sbjct: 252 YDQGEAVSGLLKDAGFGQIRVVPDAAGLDRVV 283 >gi|260584606|ref|ZP_05852352.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Granulicatella elegans ATCC 700633] gi|260157629|gb|EEW92699.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Granulicatella elegans ATCC 700633] Length = 291 Score = 116 bits (290), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 79/228 (34%), Positives = 118/228 (51%), Gaps = 13/228 (5%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101 ++R E + I +FY +S DT PRPETE LV+ +AF + ++ ++ Sbjct: 70 LIRLSNFEPLQYITKQAEFYGREFIVSPDTLIPRPETEELVEKIIAF----LSEQSTGKV 125 Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 L++G GTG + L E F GVDIS ALE+AK N + E SD F V Sbjct: 126 LEIGVGTGCIIHTLALECSDFSYQGVDISEGALEVAKKNQEKYEL-ENVSLYLSDVFQEV 184 Query: 162 EG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220 F I+SNPPYI+ + + V F+P ++L +GL+ YR IA+ + +L ++ Sbjct: 185 SPHKFIAIISNPPYIDVSEKNVMDQSVLRFEPEVALFAEDEGLAIYRMIAENLENYLLEE 244 Query: 221 GLCSVEIGYNQKVDVVRIFE----SRKLFLVNAFKDYGGNDRVLLFCR 264 G EIG+ Q V ++FE +RK V+ KD GNDR+++ R Sbjct: 245 GQAFFEIGFQQGKAVQQLFEYYCPNRK---VSVHKDLSGNDRMIIVGR 289 >gi|163750756|ref|ZP_02157991.1| hemK family protein [Shewanella benthica KT99] gi|161329451|gb|EDQ00445.1| hemK family protein [Shewanella benthica KT99] Length = 278 Score = 116 bits (290), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 80/237 (33%), Positives = 124/237 (52%), Gaps = 8/237 (3%) Query: 26 PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85 PD L Q T + R + I I+G R+F+++ ++ T PRP+TE+LV++A Sbjct: 44 PDERLTSDQVVDYTKMVQRRVLGTPIAHIVGEREFWSLPFMVNPTTLIPRPDTEILVETA 103 Query: 86 LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145 L +LP E ++LDLGTGTGA+ L+L E ++ VD +A+ +AK+N Sbjct: 104 L--NLPLAEN---AQVLDLGTGTGAIALSLAYEKKEWQITAVDKIIEAVALAKANREHLK 158 Query: 146 VSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204 + ++ + +QSDWF SV F++IVSNPPYI+ +VR F+P+ +L G G + Sbjct: 159 L-QQVEIIQSDWFDSVTCYDFNLIVSNPPYIDETDAHLDQGDVR-FEPQSALTAGEAGFA 216 Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 IA +L G +E GY Q + + + V +D+G NDR L Sbjct: 217 DLYYIAASARDYLAPGGYLLLEHGYQQAMPLRKKMIELGYENVATVRDFGSNDRCTL 273 >gi|293553328|ref|ZP_06673964.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Enterococcus faecium E1039] gi|291602552|gb|EFF32768.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Enterococcus faecium E1039] Length = 279 Score = 116 bits (290), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 85/242 (35%), Positives = 127/242 (52%), Gaps = 22/242 (9%) Query: 27 DSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL 86 + + ++ QR T+ + H + +LG+ DFY+ RL ++ T PRPETE LV+ L Sbjct: 48 EEISEEEQRLIETDLRLLLADHPPQY-LLGYADFYDHRLKVTEATLIPRPETEELVEWCL 106 Query: 87 AFSLPRIEKRDV-VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145 E DV + ++D+GTGTGA+ ++L + VD+S +ALE+AK NA G Sbjct: 107 D------ETPDVPLEVIDIGTGTGAIAISLKAARRNWHVSAVDLSEEALEVAKENAQKEG 160 Query: 146 VSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202 F DTL ++ FDVI+SNPPYI + + VR F+P+I+L DG Sbjct: 161 TKISFYHGDTLGP----VMDQQFDVIISNPPYISRNEWELMDESVRSFEPKIALFAENDG 216 Query: 203 LSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES----RKLFLVNAFKDYGGNDR 258 L+ Y IA L +G +EIG+ Q V +IF+ +K V KD GN+R Sbjct: 217 LAIYEKIAVEAPSVLKSNGKIFLEIGFRQGEAVKKIFQQAFPDKK---VAIKKDLFGNER 273 Query: 259 VL 260 ++ Sbjct: 274 MI 275 >gi|71903503|ref|YP_280306.1| peptide release factor-glutamine N5-methyltransferase [Streptococcus pyogenes MGAS6180] gi|71802598|gb|AAX71951.1| peptide release factor-glutamine N5-methyltransferase [Streptococcus pyogenes MGAS6180] Length = 279 Score = 116 bits (290), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 76/228 (33%), Positives = 120/228 (52%), Gaps = 8/228 (3%) Query: 5 RDSHSFLCR-VTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63 R++ S++ R + SS +++ + + L + +H S I G F ++ Sbjct: 21 RENLSYVFREIKEWSSLDMLIHQNQAVTPEDAVLLEHIFCSLSQHLSPQYITGNAYFRDL 80 Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 +L + PRPETE LVD LA +L + +LD+GTG+GA+ ++L KE P ++ Sbjct: 81 KLAVDKRVLIPRPETEELVDMILAENLDA-----PLNVLDIGTGSGAIAISLKKERPNWQ 135 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183 DIS AL++AK+NA + F ++SD FS + G FD+IVSNPPYI + + Sbjct: 136 VTASDISRAALDLAKANADAYQLDITF--IESDVFSLISGTFDIIVSNPPYISYEDKEEV 193 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231 L V +P ++L +G + YR I + +L K+G EIGY Q Sbjct: 194 SLNVLQSEPHLALFAKENGYAIYRKIIEQADNYLTKEGKLYFEIGYKQ 241 >gi|257885489|ref|ZP_05665142.1| modification methylase HemK [Enterococcus faecium 1,231,501] gi|257821345|gb|EEV48475.1| modification methylase HemK [Enterococcus faecium 1,231,501] Length = 290 Score = 115 bits (289), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 84/242 (34%), Positives = 127/242 (52%), Gaps = 22/242 (9%) Query: 27 DSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL 86 + + ++ QR T+ + H + +LG+ DFY+ RL ++ T PRPETE LV+ L Sbjct: 59 EEISEEEQRLIETDLRLLLADHPPQY-LLGYADFYDHRLKVTEATLIPRPETEELVEWCL 117 Query: 87 AFSLPRIEKRDV-VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145 E DV + ++D+GTGTGA+ ++L + VD+S +ALE+AK NA G Sbjct: 118 D------ETPDVPLEVIDIGTGTGAIAISLKAARRNWHVSAVDLSEEALEVAKENAQKEG 171 Query: 146 VSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202 F DTL ++ FDVI+SNPPYI + + VR F+P+++L DG Sbjct: 172 TKISFYHGDTLGP----VMDQQFDVIISNPPYISRNEWELMDESVRSFEPKMALFAENDG 227 Query: 203 LSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES----RKLFLVNAFKDYGGNDR 258 L+ Y IA L +G +EIG+ Q V +IF+ +K V KD GN+R Sbjct: 228 LAIYEKIAVEAPSVLKSNGKIFLEIGFRQGEAVKKIFQQAFPDKK---VKIKKDLFGNER 284 Query: 259 VL 260 ++ Sbjct: 285 MI 286 >gi|222153024|ref|YP_002562201.1| methyltransferase [Streptococcus uberis 0140J] gi|222113837|emb|CAR41935.1| putative methyltransferase [Streptococcus uberis 0140J] Length = 274 Score = 115 bits (289), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 77/215 (35%), Positives = 115/215 (53%), Gaps = 8/215 (3%) Query: 47 KHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGT 106 +H S I+G F ++ L++ PRPETE LVD LA + +R+LD+GT Sbjct: 64 QHRSPQYIVGQAYFRDLVLSVDERVLIPRPETEELVDLILAEN-----STQSLRLLDIGT 118 Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFD 166 G+GA+ ++L KE P + DIS +AL +A NA G F ++SD F S+ G FD Sbjct: 119 GSGAIAISLKKERPDWDVFASDISPEALALANYNAEQLGCQITF--VESDIFRSITGSFD 176 Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE 226 +IVSNPPYI + +G+ V +P ++L +G + YR I + +L ++G E Sbjct: 177 IIVSNPPYIAFEDKEEVGINVLKSEPHLALFAEENGYAIYRKIIEEAGFYLKENGKLYFE 236 Query: 227 IGYNQKVDVVRIFESR-KLFLVNAFKDYGGNDRVL 260 IGY Q + + ES V +DY G DR++ Sbjct: 237 IGYKQGKVIREMLESSFPHKRVRLLQDYFGKDRMI 271 >gi|332285703|ref|YP_004417614.1| heme biosynthesis protein [Pusillimonas sp. T7-7] gi|330429656|gb|AEC20990.1| heme biosynthesis protein [Pusillimonas sp. T7-7] Length = 285 Score = 115 bits (289), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 73/219 (33%), Positives = 112/219 (51%), Gaps = 9/219 (4%) Query: 43 VRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRIL 102 R L E + ILG+++F +S PRPETELLV++AL + +++ R+L Sbjct: 66 ARRLAGEPMAYILGYKEFMGRDFRVSPGVLIPRPETELLVETALDY----LQRCRAPRVL 121 Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162 DLGTG GA+ +++ + D+S AL +A+ NA G R + L W+ ++ Sbjct: 122 DLGTGAGAIAISIALNASGASIAATDVSMDALAVARQNAQALGA--RVEFLSGSWYDALV 179 Query: 163 GL--FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220 G FD+IVSNPPYI + ++R F+P +L G DGLS RTI G L Sbjct: 180 GHSGFDLIVSNPPYIAACDPHLAQGDLR-FEPVQALTDGSDGLSALRTIVQGAGARLKPG 238 Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRV 259 +E G++Q V ++ + V + +D G +RV Sbjct: 239 AALFLEHGWDQAKAVRQLLQQAGFTQVASLQDLAGIERV 277 >gi|241889800|ref|ZP_04777098.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Gemella haemolysans ATCC 10379] gi|241863422|gb|EER67806.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Gemella haemolysans ATCC 10379] Length = 280 Score = 115 bits (289), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 70/240 (29%), Positives = 134/240 (55%), Gaps = 16/240 (6%) Query: 31 DDRQRFFLTNAIVRSLKHE-SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFS 89 ++ +++F + I + +K + + ++G+ FY+ + ++ D PR ETE L+ + + Sbjct: 50 ENEEKYF--SLIEKHIKEDVPLSHLVGFEYFYDRKYKVTKDVLSPRMETEELIYKVIEY- 106 Query: 90 LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD-----ISCKALEIAKSNAVTN 144 ++ +ILDL TG+G + + L KE + V VD IS +A+E+AK N+ ++ Sbjct: 107 -INTSNKNKFKILDLCTGSGIIAITLKKE---LEQVSVDVIASDISKEAIEVAKENSQSH 162 Query: 145 GVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204 + +F ++SD F++++ FD+IVSNPPYI+ + V +DP ++L +G+ Sbjct: 163 DATIKF--IKSDIFNNIDDKFDIIVSNPPYIDRKDKVTMQDNVLKYDPHLALFAEEEGMY 220 Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 YR I + + +LN++G+ EIGY+QK ++++ + + +KD G DR+ R Sbjct: 221 FYRKIIEQANDYLNENGVIFFEIGYDQKDKIIKLADMNG-YSAEVYKDINGRDRMAFLVR 279 >gi|302392965|ref|YP_003828785.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Acetohalobium arabaticum DSM 5501] gi|302205042|gb|ADL13720.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Acetohalobium arabaticum DSM 5501] Length = 307 Score = 115 bits (289), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 69/227 (30%), Positives = 119/227 (52%), Gaps = 8/227 (3%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101 +++ K + I+G+++F +++ ++ D PRPETE LV++ + +KR+ + + Sbjct: 65 VIQRAKRMPVAYIIGYQEFMSLKFKVNEDVLIPRPETEHLVEAVIQRVNKLADKREKLTV 124 Query: 102 LDLGTGTGAVCLALLKE---SPF-FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 +DL TG+GA+ ++L KE P +G D+S +AL +AK NA + V + L D Sbjct: 125 IDLCTGSGAIIISLAKELADVPLEINYIGTDVSQEALAVAKDNAKLHQVQNQIQFLVGDL 184 Query: 158 FSSVEGLF---DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214 + V+ L D+I+SNPPYI + L E++ ++P I+L G +G+ YR I Sbjct: 185 LNPVKELNLKPDIIISNPPYIADKELQELEPELQ-YEPEIALKAGENGIDFYRQIISETE 243 Query: 215 RHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 + L G+ E+G Q V ++ E + DY RV+L Sbjct: 244 QLLTDGGIIGFEVGNQQSKSVYQLLEENNFINLTVIDDYAEVPRVIL 290 >gi|170017815|ref|YP_001728734.1| methylase of polypeptide chain release factor [Leuconostoc citreum KM20] gi|169804672|gb|ACA83290.1| Methylase of polypeptide chain release factor [Leuconostoc citreum KM20] Length = 332 Score = 115 bits (289), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 80/222 (36%), Positives = 115/222 (51%), Gaps = 7/222 (3%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101 I ++ + ILG FY + PRPETE LV LA + + V + Sbjct: 110 IAMLIQQQPPQYILGHAPFYGREFIVDERVLIPRPETEQLVAWILADA--SGTTGESVSV 167 Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSS 160 LD+GTG+GA+ L+ E+P +G DIS AL +A NA + + RF ++SD FS Sbjct: 168 LDIGTGSGAIIETLMLENPRVRGFAADISSDALTVAALNAQQLNIKQLRF--VESDVFSG 225 Query: 161 VEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 + L FD+IVSNPPYI S D + V ++P +L GL+ Y+ IA+G++ HL Sbjct: 226 LADLRFDLIVSNPPYIASSDEDEMDASVLTYEPHDALFADNQGLAIYQKIAEGLAAHLTP 285 Query: 220 DGLCSVEIGYNQKVDVVRIFE-SRKLFLVNAFKDYGGNDRVL 260 G EIGY Q VV I + + V +D+ G DR++ Sbjct: 286 QGRAYFEIGYKQGQQVVDIMQKALPKATVTLKQDFAGLDRMV 327 >gi|320160373|ref|YP_004173597.1| putative modification methylase HemK [Anaerolinea thermophila UNI-1] gi|319994226|dbj|BAJ62997.1| putative modification methylase HemK [Anaerolinea thermophila UNI-1] Length = 287 Score = 115 bits (289), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 73/244 (29%), Positives = 126/244 (51%), Gaps = 10/244 (4%) Query: 22 VIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELL 81 + P+++L D Q L + R L+ + + G ++F+ + +S PRPETE L Sbjct: 44 IAAHPETLLSDEQASHLNTLLGRLLEGVPLPYLTGKQEFFGLEFEVSPAVLIPRPETETL 103 Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 V++AL + L R +R+ R+ D+GTG+G + +++ P + + D S +AL++A+ N Sbjct: 104 VEAALQW-LKRFPERN--RVADVGTGSGCIAVSIAYHMPNVRVLATDFSHEALKVAQRNV 160 Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201 +GVS+R +Q D S+ G+FD++ +N PYI + +D F+P +LDGG Sbjct: 161 NRHGVSDRVQLIQCDLLSACAGMFDLVCANLPYIPTSALD--ETPPARFEPIAALDGGES 218 Query: 202 GLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL---VNAFKDYGGNDR 258 G + + R L G +EI ++Q V I +R +F + +D DR Sbjct: 219 GWEKIKALLQDAPRWLVPGGCILLEIQWDQGQTVSEI--ARGIFPAAEIQILQDLAHLDR 276 Query: 259 VLLF 262 V+L Sbjct: 277 VVLI 280 >gi|310644399|ref|YP_003949158.1| protein-(glutamine-n5) methyltransferase, release factor-specific [Paenibacillus polymyxa SC2] gi|309249350|gb|ADO58917.1| Protein-(Glutamine-N5) methyltransferase, release factor-specific [Paenibacillus polymyxa SC2] Length = 299 Score = 115 bits (289), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 80/217 (36%), Positives = 107/217 (49%), Gaps = 9/217 (4%) Query: 26 PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85 P SV D +R I R E I+G ++FY +S PRPETELLV++ Sbjct: 66 PSSVKDTWERI-----IARKAAGEPAQYIIGQQEFYGRPFAVSPSVLIPRPETELLVEAI 120 Query: 86 LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145 L R+ LD+GTG+GA+ + L E P + DIS ALEIA NA NG Sbjct: 121 LQHG-DRLWPSGAPHALDIGTGSGAIAVTLAAERPRWHVAAGDISAAALEIAAQNAAANG 179 Query: 146 VSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204 F + D + G D++VSNPPYI + + L EVRD +PR++LDGG DGL Sbjct: 180 AVIEFR--EGDLLAPFAGTAVDILVSNPPYIPAADIAGLQPEVRDHEPRMALDGGPDGLG 237 Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 YR + + + L E+G Q DV + E Sbjct: 238 PYRAMLEQLGLLQAPPRLIGFELGMGQARDVAGLLEQ 274 >gi|319787973|ref|YP_004147448.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Pseudoxanthomonas suwonensis 11-1] gi|317466485|gb|ADV28217.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Pseudoxanthomonas suwonensis 11-1] Length = 279 Score = 115 bits (289), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 79/222 (35%), Positives = 108/222 (48%), Gaps = 7/222 (3%) Query: 44 RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103 R L E + + G R F+ + L + +T PRPETELLV+ AL R+ + VR+ D Sbjct: 62 RRLAGEPVAYLTGHRGFWTLDLETTPETLIPRPETELLVELALG----RLPVDEPVRVAD 117 Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-E 162 LGTGTGA+ LA+ E P V D++ L +A NA NGV + + DW ++ Sbjct: 118 LGTGTGAIALAIASERPLAAVVATDVAKATLAVAVRNAQANGVGNVW-FRRGDWCQALGR 176 Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL 222 FD++ SNPPYI ++R +P +L G DGL RTI HL G Sbjct: 177 DRFDLVASNPPYIAEGDRHLSEGDLR-HEPARALSSGADGLDAIRTIVATAPDHLVPGGW 235 Query: 223 CSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 +E GY+Q V + E V +D DRV L R Sbjct: 236 LLLEHGYDQGAAVRALLEQAGFVEVATAQDLEQRDRVSLGRR 277 >gi|309792621|ref|ZP_07687082.1| modification methylase, HemK family [Oscillochloris trichoides DG6] gi|308225343|gb|EFO79110.1| modification methylase, HemK family [Oscillochloris trichoides DG6] Length = 274 Score = 115 bits (289), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 77/223 (34%), Positives = 116/223 (52%), Gaps = 8/223 (3%) Query: 40 NAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV 99 N + R E + ++G ++FY L + PRPETELLV+ ALA +++ Sbjct: 52 NLVERRATGEPVAYLVGHKEFYGYELLVDRRVLVPRPETELLVEVALAG---LGDRQAAW 108 Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 RI DLGTG+GA+ +AL + P + VD+S ALE+A +N + +SER +Q D + Sbjct: 109 RIADLGTGSGAIAVALGLQLPHAQIEAVDLSADALEVAAANVQRHALSERVRLMQGDLCA 168 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD-GGIDGLSHYRTIADGVSRHLN 218 + G +D+IVSNPPY I+ + V +P ++L+ GG DG YR I +HL Sbjct: 169 PLAGHYDLIVSNPPY---TILAEVEPNVLAHEPHLALEGGGADGADFYRRIFATAPQHLR 225 Query: 219 KDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDYGGNDRVL 260 G EIG Q V + ++ V + D G+ RV+ Sbjct: 226 AGGAIVCEIGAWQGEIVSALAQAAFPTDEVRLYHDLAGHARVV 268 >gi|296124206|ref|YP_003631984.1| modification methylase, HemK family [Planctomyces limnophilus DSM 3776] gi|296016546|gb|ADG69785.1| modification methylase, HemK family [Planctomyces limnophilus DSM 3776] Length = 307 Score = 115 bits (289), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 74/263 (28%), Positives = 135/263 (51%), Gaps = 14/263 (5%) Query: 7 SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66 +H+ C L +H D L + R + + + R + E + ++G R+F+++ + Sbjct: 44 AHARQCHRIQLYTHY-----DEELTEEVRASMRDLVQRRARQEPVAYLVGEREFFSLSFS 98 Query: 67 LSSDTFEPRPETELLVDSALAF--SLPRIEKRDVV----RILDLGTGTGAVCLALLKESP 120 +++D PRP++E L+ A++ P + V RI+DL TG+G + + L ++ P Sbjct: 99 VNADVLIPRPDSETLIVEAISCLKPTPADDTASVASRSWRIVDLCTGSGCLAITLARQLP 158 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESV 178 + + D+S KAL +A+ N + +++R + Q +E FD+IVSNPPYI + Sbjct: 159 TAQLIATDLSDKALAVARQNLARHSLADRVELRQGSLLEPLENEPPFDLIVSNPPYIPTA 218 Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238 ++ L +VR +PR++LDGG DG+ R + ++HL G +E Q ++ Sbjct: 219 DIESLEEDVRRHEPRLALDGGADGMDLLRPLIAEGAKHLLPGGWMLLEFTSEQAPALMNY 278 Query: 239 FESRKLF-LVNAFKDYGGNDRVL 260 +++ + LV KD RVL Sbjct: 279 AQAQPDWSLVQVVKDLSQLPRVL 301 >gi|310829055|ref|YP_003961412.1| hemK protein [Eubacterium limosum KIST612] gi|308740789|gb|ADO38449.1| hemK protein [Eubacterium limosum KIST612] Length = 304 Score = 115 bits (289), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 84/251 (33%), Positives = 125/251 (49%), Gaps = 12/251 (4%) Query: 12 CRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDT 71 R+T S Q V + + R R I R E + I G ++F + +S D Sbjct: 55 ARITFYSDPQKAVSFEDAEEYRSR------IDRRALLEPVAYITGEKEFMGLVFHVSPDV 108 Query: 72 FEPRPETELLVDSALAFSLPRIEKRDV--VRILDLGTGTGAVCLALLKESPFFKGVGVDI 129 PRP+TE LV++ L +P+I K+D R+LDL TG+GA+ L+L P DI Sbjct: 109 LIPRPDTESLVEAILERVIPQI-KQDTGKPRVLDLCTGSGAIGLSLKFFDPSAVVTLTDI 167 Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL--FDVIVSNPPYIESVIVDCLGLEV 187 S +AL++A NA G S ++SD F + FD+IVSNPPYI I+ L ++ Sbjct: 168 SGRALKVAAENARNLGFS-NITMVESDLFKGLSKTEPFDLIVSNPPYIPDGIIPTLQRDI 226 Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLV 247 D++P ++L GG+ G Y IA +L K G +E+G Q+V V + E++ + Sbjct: 227 VDYEPMLALSGGVTGYDLYERIAGETGPYLRKGGAIVLEVGNAQEVRVAELLEAQGFGAI 286 Query: 248 NAFKDYGGNDR 258 D G R Sbjct: 287 TMVPDLTGAVR 297 >gi|165924032|ref|ZP_02219864.1| protein methyltransferase HemK [Coxiella burnetii RSA 334] gi|212219473|ref|YP_002306260.1| peptide release factor-glutamine N5-methyltransferase [Coxiella burnetii CbuK_Q154] gi|165916517|gb|EDR35121.1| protein methyltransferase HemK [Coxiella burnetii RSA 334] gi|212013735|gb|ACJ21115.1| peptide release factor-glutamine N5-methyltransferase [Coxiella burnetii CbuK_Q154] Length = 277 Score = 115 bits (289), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 79/240 (32%), Positives = 126/240 (52%), Gaps = 9/240 (3%) Query: 26 PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85 P+ L+ Q+ L+ + R LK E I ILG ++F+++ L ++ D PRPETE+LV+ Sbjct: 45 PEIQLNSSQQKTLSAYVKRRLKGEPIAYILGQKEFWSLNLKVTPDVLIPRPETEMLVEWI 104 Query: 86 LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145 L +LP+ EK +RI DLGTG+GAV LA+ E P + D S AL+IA+ NA + Sbjct: 105 LK-NLPKDEK---LRIADLGTGSGAVALAIAVERPHWTIDATDNSQAALKIAEINAKQHE 160 Query: 146 VSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204 + + + Q +W ++ + IV NPPYI L+ +PR +L G DGLS Sbjct: 161 I-KNCNFYQGEWCQALPRRDYHAIVGNPPYIPD---KDQHLQQLKHEPREALAAGSDGLS 216 Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 + I +L G +E GY+Q ++ + ++ + +D G R+++ R Sbjct: 217 AIKIIIHEAKSYLVNGGWLLLEHGYDQAEKIMTLMQADGYREITDRRDLAGLSRMMVARR 276 >gi|121608525|ref|YP_996332.1| HemK family modification methylase [Verminephrobacter eiseniae EF01-2] gi|121553165|gb|ABM57314.1| modification methylase, HemK family [Verminephrobacter eiseniae EF01-2] Length = 294 Score = 115 bits (288), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 72/215 (33%), Positives = 103/215 (47%), Gaps = 9/215 (4%) Query: 44 RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103 R E + + G ++FY + L + + +PRP+TE LVD AL I R+LD Sbjct: 72 RRAAGEPVAYLTGRKEFYGLPLAIDARVLDPRPDTETLVDWALEV----IAPLPAPRVLD 127 Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG 163 LGTG+GA+ LAL + P + +D S AL +A++NA G+ + Q W S Sbjct: 128 LGTGSGAIALALQRHCPGAWILAIDASADALAVARANAGRLGLPVQLA--QGHWLSGAPA 185 Query: 164 LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223 FD IVSNPPY+ + L +PR +L G DGL R+I HL G Sbjct: 186 GFDAIVSNPPYLGAQDPHLAALA---HEPRQALVSGADGLQDIRSIIGQAPGHLAAGGWL 242 Query: 224 SVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258 +E G++Q V + +R V + D G R Sbjct: 243 LLEHGHDQAAAVHALLSARGFARVQSRADLAGIAR 277 >gi|296775659|gb|ADH42936.1| polypeptide chain release factor methylase [uncultured SAR11 cluster alpha proteobacterium H17925_23J24] Length = 275 Score = 115 bits (288), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 76/260 (29%), Positives = 135/260 (51%), Gaps = 16/260 (6%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 DS L + G+ ++++D + +++ + + I+R K+E I I ++F + Sbjct: 25 DSEIILSHIMGVPREKLLID-ERIIEHDKIIKFKSLILRRSKNEPIAYITNNKEFRSTNF 83 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 +++ PRPET LL+D + +I K + L++G GTG + ++LKE KG+ Sbjct: 84 FXDNNSLIPRPETXLLIDP-----ISKIFKNKKLFFLEVGIGTGCISFSILKEIMSSKGI 138 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPYIESVIVD 181 G+DIS + L+ AK N ++F+ + S+E + FD+IVSNPPY+ V+ Sbjct: 139 GIDISNRTLKNAKINL------KKFNNRIKLFRKSIEDIRNIKFDLIVSNPPYVIKREVN 192 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 L +++ ++PRI+LDGG DGL + + L +G+ ++EIG Q V+ + +S Sbjct: 193 RLSSDIKKYEPRIALDGGNDGLDVIKKVIYKSKYILKSNGILALEIGTGQFRSVMALLKS 252 Query: 242 RKLFLVNAFKDYGGNDRVLL 261 +DY N R + Sbjct: 253 NNFKKKTLIRDYRDNVRCIF 272 >gi|320354564|ref|YP_004195903.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Desulfobulbus propionicus DSM 2032] gi|320123066|gb|ADW18612.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Desulfobulbus propionicus DSM 2032] Length = 286 Score = 115 bits (288), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 81/265 (30%), Positives = 128/265 (48%), Gaps = 13/265 (4%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 +A D+ L +T +S V++ +D + I + + + + G ++F+ Sbjct: 21 EAALDARLLLQHLTAMSRSDVVLHGHESVDSQTVARYRQLIEQRCQRVPLQYLTGVQEFW 80 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE--S 119 ++ T+S PRPETE +++ L V R LD+ TG+GA+ + L +E Sbjct: 81 SLAFTVSPAVLIPRPETEFMLEQVLTTC----AGTTVERALDMCTGSGAIAVVLARELGR 136 Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIES 177 P + VDIS AL +A N +GV+ L D F+++ FD+IVSNPPYI Sbjct: 137 PV---IAVDISEAALAVAADNVRCHGVANLVTLLCGDLFAALNPARTFDLIVSNPPYIAE 193 Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237 ++D L EV +PR++L GG GL IA+ L G +EIG +QK V R Sbjct: 194 AVIDQLEPEVAQAEPRLALSGGASGLESIARIAEAAQDFLCPGGWIFLEIGADQKHAVER 253 Query: 238 IFESRKLFL--VNAFKDYGGNDRVL 260 +F + L V+ D+ RV+ Sbjct: 254 LFHAPGLAYREVSVIHDWADRPRVV 278 >gi|257092417|ref|YP_003166058.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257044941|gb|ACV34129.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 274 Score = 115 bits (288), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 85/262 (32%), Positives = 129/262 (49%), Gaps = 19/262 (7%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ + V + ++I +P L Q L + + R E + +LG FY + Sbjct: 18 DARLLVEHVAACTHAELISEPMRRLLAEQAQVLADLVERRAAGEPLAYLLGSAGFYGIEF 77 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 ++ PRPETELLV A+ +E RI+DLGTG+G V + + P + Sbjct: 78 QITPAVLIPRPETELLVTLAVKC----VESLAEPRIVDLGTGSGVVAVTVGCLCPAARIT 133 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYI----ESVIV 180 VD+S AL++A+ NA +GV F L DW++ + + FD+IV+NPPY+ E + Sbjct: 134 AVDLSPSALDLARINAGRHGVEATF--LVGDWYTPLGDCGFDLIVANPPYVANDDEHLQR 191 Query: 181 DCLGLEVRDFDPRISLDGGI---DGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237 D L F+PR++L G+ DGL+ R I DG RHL G +E GY+Q V Sbjct: 192 DGL-----PFEPRMALTDGVPGGDGLACIRRITDGARRHLLPGGWLLIEHGYDQAAAVRN 246 Query: 238 IFESRKLFLVNAFKDYGGNDRV 259 L V +++D +RV Sbjct: 247 ELHKAGLSDVASWQDLARIERV 268 >gi|330815384|ref|YP_004359089.1| HemK protein [Burkholderia gladioli BSR3] gi|327367777|gb|AEA59133.1| HemK protein [Burkholderia gladioli BSR3] Length = 282 Score = 115 bits (288), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 89/263 (33%), Positives = 127/263 (48%), Gaps = 19/263 (7%) Query: 6 DSHSFLCRVTGLSSHQVIV--DPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63 D+ L G S Q+I D D +R+ A R L E + +++G R+F+ + Sbjct: 21 DARILLAHALGWSRTQLITRADAPLAAADAERYLALAA--RRLAGEPVAQLVGSREFFGL 78 Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 ++ D PRP+TELLV+SALA IE +LDLGTG+GAV +A+ P + Sbjct: 79 EFAVTPDVLIPRPDTELLVESALAA----IEGIAAPAVLDLGTGSGAVAVAIASMRPDAR 134 Query: 124 GVGVDISCKALEIAKSNA------VTNGVSERFDTLQSDWFSSVEGL--FDVIVSNPPYI 175 +D S AL +A+ NA G + RF L+SDW+ +++ L F IVSNPPYI Sbjct: 135 VQALDRSAAALAVARGNAARLLDPARPGGALRF--LESDWYGALDPLQRFHAIVSNPPYI 192 Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235 ++R F+PR +L DGL R IA G L G +E GY+Q V Sbjct: 193 ACRDPHLEQGDLR-FEPRGALTDEADGLEAIRAIAAGAPAFLLPRGALWIEHGYDQAEAV 251 Query: 236 VRIFESRKLFLVNAFKDYGGNDR 258 I + V + D +R Sbjct: 252 RAILAAAGFEAVASLTDLAAIER 274 >gi|261208267|ref|ZP_05922940.1| modification methylase HemK [Enterococcus faecium TC 6] gi|289565644|ref|ZP_06446090.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Enterococcus faecium D344SRF] gi|260077524|gb|EEW65242.1| modification methylase HemK [Enterococcus faecium TC 6] gi|289162612|gb|EFD10466.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Enterococcus faecium D344SRF] Length = 290 Score = 115 bits (288), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 84/242 (34%), Positives = 127/242 (52%), Gaps = 22/242 (9%) Query: 27 DSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL 86 + + ++ QR T+ + H + +LG+ DFY+ RL ++ T PRPETE LV+ L Sbjct: 59 EEISEEEQRLIETDLRLLLADHPPQY-LLGYADFYDHRLKVTEATLIPRPETEELVEWCL 117 Query: 87 AFSLPRIEKRDV-VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145 E DV + ++D+GTGTGA+ ++L + VD+S +ALE+AK NA G Sbjct: 118 D------ETPDVPLEVIDIGTGTGAIAISLKAARRNWHVSAVDLSEEALEVAKENAQKEG 171 Query: 146 VSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202 F DTL ++ FDVI+SNPPYI + + VR F+P+++L DG Sbjct: 172 TKISFYHGDTLGP----VMDQQFDVIISNPPYISRNEWELMDESVRSFEPKMALFAENDG 227 Query: 203 LSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES----RKLFLVNAFKDYGGNDR 258 L+ Y IA L +G +EIG+ Q V +IF+ +K V KD GN+R Sbjct: 228 LAIYEKIAVEAPSVLKPNGNIFLEIGFRQGKAVKKIFQQAFPHKK---VKIKKDLFGNER 284 Query: 259 VL 260 ++ Sbjct: 285 MI 286 >gi|332637163|ref|ZP_08416026.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Weissella cibaria KACC 11862] Length = 287 Score = 115 bits (288), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 76/242 (31%), Positives = 126/242 (52%), Gaps = 13/242 (5%) Query: 27 DSVLDDRQRFFLTNAIVRSLKH-ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85 ++VL+D +R A VR++K + + LG FY + PR ETE LV+ Sbjct: 53 NTVLEDEKRLRFMVA-VRAIKGGQPVQYALGHAAFYGREFNVDRRVLIPRQETEELVEWV 111 Query: 86 L---AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142 L + P V R+LD+GTG+GA+ + + E P + G DIS AL +A++NA Sbjct: 112 LNDHKVTGP------VQRVLDIGTGSGAIAVTIGAERPTWDVTGADISADALVVAQTNA- 164 Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202 + +++ + ++SD FS G +D+I+SNPPYI D + V ++P ++L +G Sbjct: 165 -DQFAKQVNFIESDLFSQATGQYDIIISNPPYISEAERDVMDESVIMYEPDLALFADDEG 223 Query: 203 LSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262 L+ Y+ +A + +L +G EIGY Q ++ +F V +D G+DR++ Sbjct: 224 LALYKQMAAQLLTYLAPNGTAYFEIGYQQGPALLAVFGELPGVSVALRQDMSGHDRMIKV 283 Query: 263 CR 264 R Sbjct: 284 SR 285 >gi|94988611|ref|YP_596712.1| peptide release factor-glutamine N5-methyltransferase [Streptococcus pyogenes MGAS9429] gi|94990487|ref|YP_598587.1| peptide release factor-glutamine N5-methyltransferase [Streptococcus pyogenes MGAS10270] gi|94992435|ref|YP_600534.1| peptide release factor-glutamine N5-methyltransferase [Streptococcus pyogenes MGAS2096] gi|94994409|ref|YP_602507.1| Peptide release factor-glutamine N5-methyltransferase [Streptococcus pyogenes MGAS10750] gi|209559424|ref|YP_002285896.1| Putative protoporphyrinogen oxidase [Streptococcus pyogenes NZ131] gi|94542119|gb|ABF32168.1| peptide release factor-glutamine N5-methyltransferase [Streptococcus pyogenes MGAS9429] gi|94543995|gb|ABF34043.1| Peptide release factor-glutamine N5-methyltransferase [Streptococcus pyogenes MGAS10270] gi|94545943|gb|ABF35990.1| Peptide release factor-glutamine N5-methyltransferase [Streptococcus pyogenes MGAS2096] gi|94547917|gb|ABF37963.1| Peptide release factor-glutamine N5-methyltransferase [Streptococcus pyogenes MGAS10750] gi|209540625|gb|ACI61201.1| Putative protoporphyrinogen oxidase [Streptococcus pyogenes NZ131] Length = 279 Score = 115 bits (288), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 70/185 (37%), Positives = 103/185 (55%), Gaps = 7/185 (3%) Query: 47 KHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGT 106 +H S I G F +++L + PRPETE LVD LA +L + +LD+GT Sbjct: 64 QHLSPQYITGNAYFRDLKLAVDKRVLIPRPETEELVDMILAENLDA-----PLNVLDIGT 118 Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFD 166 G+GA+ ++L KE P ++ DIS AL++AK+NA + F ++SD FS + G FD Sbjct: 119 GSGAIAISLKKERPNWQVTASDISRAALDLAKANADAYQLDITF--IESDVFSLISGTFD 176 Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE 226 +IVSNPPYI + + L V +P ++L +G + YR I + +L K+G E Sbjct: 177 IIVSNPPYISYEDKEEVSLNVLQSEPHLALFAKENGYAIYRKIIEQADNYLTKEGKLYFE 236 Query: 227 IGYNQ 231 IGY Q Sbjct: 237 IGYKQ 241 >gi|323127209|gb|ADX24506.1| putative methyltransferase [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 279 Score = 115 bits (288), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 79/220 (35%), Positives = 117/220 (53%), Gaps = 16/220 (7%) Query: 47 KHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLG 105 +H S + G F +++L++ PRPETE LVD LA E D + +LD+G Sbjct: 64 QHLSPQYLTGRAYFRDLQLSVDQRVLIPRPETEELVDLILA------ENPDTPLSVLDIG 117 Query: 106 TGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF 165 TG+GA+ ++L KE P ++ DIS AL +A+ NA + F + SD FS + G F Sbjct: 118 TGSGAIAISLKKERPAWQLTASDISSDALSLAQDNASHYQLDITF--IVSDVFSQLSGTF 175 Query: 166 DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225 D+IVSNPPYI D +GL V +P ++L DG + YR I + S +L++ G Sbjct: 176 DMIVSNPPYIAYEDKDEVGLNVYQSEPHLALFAAEDGYAIYRRIIEEASNYLSEKGKLYF 235 Query: 226 EIGYNQ----KVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 EIGY Q K V F ++ V +D G +R+++ Sbjct: 236 EIGYKQGEGIKALVNTHFPQKR---VRVLRDVFGKERMVV 272 >gi|294615326|ref|ZP_06695201.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Enterococcus faecium E1636] gi|294617195|ref|ZP_06696847.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Enterococcus faecium E1679] gi|291591829|gb|EFF23463.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Enterococcus faecium E1636] gi|291596540|gb|EFF27781.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Enterococcus faecium E1679] Length = 279 Score = 115 bits (288), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 84/242 (34%), Positives = 127/242 (52%), Gaps = 22/242 (9%) Query: 27 DSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL 86 + + ++ QR T+ + H + +LG+ DFY+ RL ++ T PRPETE LV+ L Sbjct: 48 EEISEEEQRLIETDLRLLLADHPPQY-LLGYADFYDHRLKVTEATLIPRPETEELVEWCL 106 Query: 87 AFSLPRIEKRDV-VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145 E DV + ++D+GTGTGA+ ++L + VD+S +ALE+AK NA G Sbjct: 107 D------ETPDVPLEVIDIGTGTGAIAISLKAARRNWHVSAVDLSEEALEVAKENAQKEG 160 Query: 146 VSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202 F DTL ++ FDVI+SNPPYI + + VR F+P+++L DG Sbjct: 161 TKISFYHGDTLGP----VMDQQFDVIISNPPYISRNEWELMDESVRSFEPKMALFAENDG 216 Query: 203 LSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES----RKLFLVNAFKDYGGNDR 258 L+ Y IA L +G +EIG+ Q V +IF+ +K V KD GN+R Sbjct: 217 LAIYEKIAVEAPSVLKPNGNIFLEIGFRQGKAVKKIFQQAFPHKK---VKIKKDLFGNER 273 Query: 259 VL 260 ++ Sbjct: 274 MI 275 >gi|94971497|ref|YP_593545.1| HemK family modification methylase [Candidatus Koribacter versatilis Ellin345] gi|94553547|gb|ABF43471.1| [protein release factor]-glutamine N5-methyltransferase [Candidatus Koribacter versatilis Ellin345] Length = 280 Score = 115 bits (288), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 74/202 (36%), Positives = 108/202 (53%), Gaps = 10/202 (4%) Query: 31 DDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSL 90 D++ R+ AI R E I G ++FY +S PRPETE L+++ L + Sbjct: 52 DEQARY--DEAIARRCHGEPAQYITGHQEFYGRDFLVSPAVLIPRPETEHLIEAVLELA- 108 Query: 91 PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150 PR + +V LD+GTG+G + L KE P K VDIS +AL+IA++NA F Sbjct: 109 PREVRWEV---LDVGTGSGCIAATLAKEFPRMKVTAVDISPEALQIAQANAARLEAQVEF 165 Query: 151 DTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208 SD S++E FD+IVSNPPY+ D + +V+DF+P ++ GG G+ + Sbjct: 166 RV--SDLLSAIEPGRQFDMIVSNPPYVGECEADKVQRQVKDFEPHCAVFGGERGMDIIKR 223 Query: 209 IADGVSRHLNKDGLCSVEIGYN 230 +A V HL G +EIGY+ Sbjct: 224 LAPQVWEHLKPGGWFLMEIGYS 245 >gi|51246577|ref|YP_066461.1| HemK methylase [Desulfotalea psychrophila LSv54] gi|50877614|emb|CAG37454.1| related to HemK methylase [Desulfotalea psychrophila LSv54] Length = 291 Score = 115 bits (287), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 84/269 (31%), Positives = 140/269 (52%), Gaps = 18/269 (6%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 AL D L G + ++ + P++ + + R ++ E + ILG ++F++ Sbjct: 22 ALVDVQLLLGHCLGKTRTELFLYPENPVSSGSEAAFNLLLARRVQREPLAYILGEQEFWS 81 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE--SP 120 + ++S PRPETE +++ LA + + V +LDL TG+G + + L KE P Sbjct: 82 LDFKVNSHVLIPRPETEFMLEKVLASA--GAWRESVTPVLDLCTGSGVIAVVLAKELGRP 139 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL--FDVIVSNPPYIE-S 177 V VDIS +AL++A+ NA + V+ F ++SD F+++E L F +IVSNPPY+ Sbjct: 140 V---VAVDISEEALQVARFNAHRHHVAINF--IRSDLFANIEPLHQFGLIVSNPPYVSRG 194 Query: 178 VIVDCLGLEVRDFDPRISLDGGI-DGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236 I L EV ++P ++LDGG DGL R + D + ++L+ G +E G +Q + Sbjct: 195 AIAHELEPEVASYEPHLALDGGAGDGLDFIRRMRDDLPKYLSLGGEVFIEFGADQGAAIA 254 Query: 237 RIF-----ESRKLFLVNAFKDYGGNDRVL 260 +F + V+ +DY DRVL Sbjct: 255 DLFAEPGSDGSSFTDVHVLQDYARRDRVL 283 >gi|50914206|ref|YP_060178.1| peptide release factor-glutamine N5-methyltransferase [Streptococcus pyogenes MGAS10394] gi|306827354|ref|ZP_07460641.1| protein-(glutamine-N5) methyltransferase [Streptococcus pyogenes ATCC 10782] gi|50903280|gb|AAT86995.1| Peptide release factor-glutamine N5-methyltransferase [Streptococcus pyogenes MGAS10394] gi|304430501|gb|EFM33523.1| protein-(glutamine-N5) methyltransferase [Streptococcus pyogenes ATCC 10782] Length = 279 Score = 115 bits (287), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 70/185 (37%), Positives = 103/185 (55%), Gaps = 7/185 (3%) Query: 47 KHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGT 106 +H S I G F +++L + PRPETE LVD LA +L + +LD+GT Sbjct: 64 QHLSPQYITGNAYFRDLKLAVDKRVLIPRPETEELVDMILAENLDA-----PLNVLDIGT 118 Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFD 166 G+GA+ ++L KE P ++ DIS AL++AK+NA + F ++SD FS + G FD Sbjct: 119 GSGAIAISLKKERPNWQVTASDISRAALDLAKANADAYQLDITF--IESDVFSLISGTFD 176 Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE 226 +IVSNPPYI + + L V +P ++L +G + YR I + +L K+G E Sbjct: 177 IIVSNPPYISYEDKEEVSLNVLQSEPHLALFAKENGYAIYRKIIEQADNYLTKEGKLYFE 236 Query: 227 IGYNQ 231 IGY Q Sbjct: 237 IGYKQ 241 >gi|56808655|ref|ZP_00366380.1| COG2890: Methylase of polypeptide chain release factors [Streptococcus pyogenes M49 591] Length = 279 Score = 115 bits (287), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 70/185 (37%), Positives = 103/185 (55%), Gaps = 7/185 (3%) Query: 47 KHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGT 106 +H S I G F +++L + PRPETE LVD LA +L + +LD+GT Sbjct: 64 QHLSPQYITGNAYFRDLKLAVDKRVLIPRPETEELVDMILAENLDA-----PLNVLDIGT 118 Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFD 166 G+GA+ ++L KE P ++ DIS AL++AK+NA + F ++SD FS + G FD Sbjct: 119 GSGAIAISLKKERPNWQVTASDISRAALDLAKANADAYQLDITF--IESDVFSLISGTFD 176 Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE 226 +IVSNPPYI + + L V +P ++L +G + YR I + +L K+G E Sbjct: 177 IIVSNPPYISYEDKEEVSLNVLQSEPHLALFAKENGYAIYRKIIEQADNYLTKEGKLYFE 236 Query: 227 IGYNQ 231 IGY Q Sbjct: 237 IGYKQ 241 >gi|139473767|ref|YP_001128483.1| methyltransferase [Streptococcus pyogenes str. Manfredo] gi|134272014|emb|CAM30253.1| putative methyltransferase [Streptococcus pyogenes str. Manfredo] Length = 279 Score = 115 bits (287), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 70/185 (37%), Positives = 103/185 (55%), Gaps = 7/185 (3%) Query: 47 KHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGT 106 +H S I G F +++L + PRPETE LVD LA +L + +LD+GT Sbjct: 64 QHLSPQYITGNAYFRDLKLAVDKRVLIPRPETEELVDMILAENLDA-----PLNVLDIGT 118 Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFD 166 G+GA+ ++L KE P ++ DIS AL++AK+NA + F ++SD FS + G FD Sbjct: 119 GSGAIAISLKKERPNWQVTASDISRTALDLAKANADAYQLDITF--IESDVFSLISGTFD 176 Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE 226 +IVSNPPYI + + L V +P ++L +G + YR I + +L K+G E Sbjct: 177 IIVSNPPYISYEDKEEVSLNVLQSEPHLALFAKENGYAIYRKIIEQADNYLTKEGKLYFE 236 Query: 227 IGYNQ 231 IGY Q Sbjct: 237 IGYKQ 241 >gi|300115231|ref|YP_003761806.1| release factor-specific protein-(glutamine-N5) methyltransferase [Nitrosococcus watsonii C-113] gi|299541168|gb|ADJ29485.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Nitrosococcus watsonii C-113] Length = 283 Score = 115 bits (287), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 79/240 (32%), Positives = 116/240 (48%), Gaps = 15/240 (6%) Query: 27 DSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL 86 D L Q + R + E + I GW++F+++ L ++ T PRPETE LV+ Sbjct: 48 DKRLTPTQWACFQQLLQRRARGEPLAYIRGWQEFWSLNLQVTEATLIPRPETEQLVE--- 104 Query: 87 AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146 +L R++ + DLGTG+GA+ LA+ E P + + DIS ALE+A+SN G+ Sbjct: 105 -LALQRLDLERAFNVADLGTGSGAIALAMGSERPRTRVIATDISAAALEVARSNGYRLGL 163 Query: 147 SERFDTLQSDWFSSVEG-LFDVIVSNPPYIES----VIVDCLGLEVRDFDPRISLDGGID 201 L DWF+ + G F +I SNPPYI + D L F+P I+L Sbjct: 164 DNVTFRL-GDWFAPLAGERFHLIASNPPYIAEGDPHLTQDGLA-----FEPDIALIAKDK 217 Query: 202 GLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 GL R IA +L G +E GY+Q ++ +F V F D G RV++ Sbjct: 218 GLGAMRHIARAAREYLVDGGWLLLEHGYDQGPSLLALFTQLGYQQVTDFCDLAGLPRVVI 277 >gi|157370233|ref|YP_001478222.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Serratia proteamaculans 568] gi|157321997|gb|ABV41094.1| modification methylase, HemK family [Serratia proteamaculans 568] Length = 276 Score = 115 bits (287), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 75/218 (34%), Positives = 113/218 (51%), Gaps = 8/218 (3%) Query: 43 VRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRIL 102 VR + E + ++G R+F+++ L++S T PRP+TE LV+ AL LP IL Sbjct: 60 VRRERGEPVAYLIGEREFWSLPLSVSPATLIPRPDTECLVELALE-RLP----SSSCNIL 114 Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162 DLGTGTGA+ LAL E + GVD+ +A+ +A+ NA + LQ WF+ + Sbjct: 115 DLGTGTGAIALALASERQDCRVTGVDLQPEAVALAQHNAQKLAIGNA-QFLQGSWFAPLA 173 Query: 163 G-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221 G F +I SNPPYI++ +VR F+P +L GL+ I ++L G Sbjct: 174 GQTFALIASNPPYIDAADPHLAQGDVR-FEPSSALVAQQHGLADLSAIVQQAPQYLQPQG 232 Query: 222 LCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRV 259 +E G+ Q V + ++ + +DYG NDRV Sbjct: 233 WLLLEHGWQQGESVRALLQAAGFISIATRRDYGDNDRV 270 >gi|148653569|ref|YP_001280662.1| HemK family modification methylase [Psychrobacter sp. PRwf-1] gi|148572653|gb|ABQ94712.1| modification methylase, HemK family [Psychrobacter sp. PRwf-1] Length = 314 Score = 115 bits (287), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 83/273 (30%), Positives = 133/273 (48%), Gaps = 37/273 (13%) Query: 22 VIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELL 81 +I D + L D ++ + I + + + G + F+++ ++ T PRP+TE+L Sbjct: 40 LITDAEYKLTDAEQAHFESGIEQMRSGTPLAYLTGKQAFWSLDFFVNEHTLIPRPDTEVL 99 Query: 82 VDSALAF---SLPRIEKRDV-------------VRILDLGTGTGAVCLALLKE------- 118 V+ LA+ +++ D R+LDLGTG+G + ++L E Sbjct: 100 VEQVLAWIDTHYAQVQNDDADDINDFNDANKLPKRLLDLGTGSGCIAISLAHELQMLAPN 159 Query: 119 --SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL--------FDVI 168 + ++ +D S ALE+A+ NA N V+ + +QSDWFS++E FD+I Sbjct: 160 HTASQWQVTAIDYSNPALEVARRNAALNKVT-NIEFIQSDWFSALEAANTNKESPRFDII 218 Query: 169 VSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228 VSNPPYI + D L+ +P +L +GL + IA +L GL +VE G Sbjct: 219 VSNPPYI---VDDDEHLDKLKAEPLSALVAPDNGLGDIKQIAGQARGYLVSGGLLAVEHG 275 Query: 229 YNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 Y+Q V +IF V +DYGGNDRV + Sbjct: 276 YDQGAAVRQIFTDFGYTQVKTVQDYGGNDRVTM 308 >gi|288817940|ref|YP_003432287.1| methyltransferase, HemK family [Hydrogenobacter thermophilus TK-6] gi|288787339|dbj|BAI69086.1| methyltransferase, HemK family [Hydrogenobacter thermophilus TK-6] gi|308751537|gb|ADO45020.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Hydrogenobacter thermophilus TK-6] Length = 271 Score = 115 bits (287), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 84/264 (31%), Positives = 127/264 (48%), Gaps = 15/264 (5%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSL----KHESIHRILGWR 58 +LRD L + + +V + +LD + +RSL + + +LG Sbjct: 14 SLRDRELLLAHLLKVKVGEVYL----LLDRHVSKEMEEEYMRSLSLLEEGYPLQYLLGEW 69 Query: 59 DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118 DFY + PRPETELLV+ L P E ++G GTG + + LL E Sbjct: 70 DFYGRTFRVEEGVLIPRPETELLVEKVLEKVPPNKEAVG----FEIGVGTGCISITLLLE 125 Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIES 177 P D+ KA+ +A++NA + V +R D F V+G+ FD ++SNPPYI Sbjct: 126 RPKLIMYADDLQEKAVHLAETNARLHKVEDRLFLKVGDMFEPVKGMVFDFVISNPPYIPQ 185 Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237 L V+ + ++SL GG G Y A V + L +DG ++EIG++Q + Sbjct: 186 KEWAGLPKGVK-LEGKVSLIGGEKGYEFYERFAKEVGKFLKEDGFFALEIGHDQGKILED 244 Query: 238 IFESRKLFLVNAFKDYGGNDRVLL 261 IF S++ F +KDY G DRV+L Sbjct: 245 IF-SQEGFFAQVYKDYAGQDRVIL 267 >gi|291334338|gb|ADD93997.1| hemK protein [uncultured marine bacterium MedDCM-OCT-S11-C310] Length = 289 Score = 115 bits (287), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 82/238 (34%), Positives = 124/238 (52%), Gaps = 10/238 (4%) Query: 24 VDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVD 83 V ++V+ + QR+ + R E + ILG ++FY +S PRPETE LV+ Sbjct: 52 VPSNAVVSEFQRW-----LSRRADCEPVAYILGDQEFYGHLFQVSPAVLIPRPETEHLVE 106 Query: 84 SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143 AL + R D +ILDL TG+G V L L E P D+S +AL +A+ NA T Sbjct: 107 KALGWC--RDRGTDSPKILDLCTGSGCVGLTLALELPKASVTLTDLSPEALAVARHNADT 164 Query: 144 NGVSERFDTLQSDWFSSV-EG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201 + V ER + D F S+ EG FD++++NPPY+E + +V D++P ++L D Sbjct: 165 HDVDERVRFFEGDLFESLPEGERFDLVLANPPYVEESFRGEMQKDVLDYEPHLALFAQDD 224 Query: 202 GLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRV 259 GL+ R I ++LN+ GL ++E+G Q VR +D GG+DR+ Sbjct: 225 GLNLIREIVTQSPKYLNQPGLLAMEMGSGQSAR-VRSLLGPSWKNPGIIQDLGGHDRI 281 >gi|113869290|ref|YP_727779.1| methylase of polypeptide chain release factor [Ralstonia eutropha H16] gi|113528066|emb|CAJ94411.1| methylase of polypeptide chain release factor [Ralstonia eutropha H16] Length = 274 Score = 115 bits (287), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 82/251 (32%), Positives = 127/251 (50%), Gaps = 8/251 (3%) Query: 10 FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69 L VTGLS Q+I L QR + R L E + ++G R+F+ + ++ Sbjct: 12 LLTHVTGLSRTQLITRDTDTLTIAQRDAFATLLARRLAGEPMAYLIGEREFFGRKFRVTP 71 Query: 70 DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129 D PRP+TE+ +++LA R+ + +LDLGTG+G + + L +E + DI Sbjct: 72 DVLIPRPDTEVAAEASLA----RLAEVPQPTVLDLGTGSGILAVTLARERRDAQVWATDI 127 Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGL-FDVIVSNPPYIESVIVDCLGLEV 187 S AL +A+ NA G ++R L SDW++++ GL F +IVSNPPYI + + ++ Sbjct: 128 SPGALMVAQDNASALG-ADRIHFLVSDWYAALPPGLRFHLIVSNPPYIAAGDPHLVEGDL 186 Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLV 247 R F+P +L DGLS R I G L DG +E GY+Q ++ E + Sbjct: 187 R-FEPIDALTDHDDGLSDLRAIVSGAGARLLPDGWLLMEHGYDQAQATRQLLEDTGFTEI 245 Query: 248 NAFKDYGGNDR 258 +D G +R Sbjct: 246 FTARDLAGLER 256 >gi|156326678|ref|XP_001618669.1| hypothetical protein NEMVEDRAFT_v1g224919 [Nematostella vectensis] gi|156199778|gb|EDO26569.1| predicted protein [Nematostella vectensis] Length = 244 Score = 115 bits (287), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 82/229 (35%), Positives = 117/229 (51%), Gaps = 8/229 (3%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L G S + P+ LD Q AIVR E + ILG + F+++ L Sbjct: 22 DAELLLAHALGKSRSYLHTWPERELDAPQLERYQAAIVRRQAGEPVAYILGQQGFWSLEL 81 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 +++ T PRP+TELLV++ LA LP +LDLGTGTGA+ LAL E P ++ Sbjct: 82 EVAAHTLIPRPDTELLVETVLAL-LPATS----AALLDLGTGTGAIALALASERPAWRLT 136 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLG 184 GVD +A+ +A+ N +S + +S WFS + G F +IVSNPPYI + Sbjct: 137 GVDRVSEAVALAERNRARLKLSNA-NFAESHWFSVLVGHRFQLIVSNPPYIAADDRHLAE 195 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233 +VR F+P +L G DGL R I +L G +E G++Q Sbjct: 196 GDVR-FEPSSALVAGADGLDDIRLIIQQAPGYLEAGGWLLLEHGFDQAA 243 >gi|237748572|ref|ZP_04579052.1| methyltransferase HemK MTase hemK [Oxalobacter formigenes OXCC13] gi|229379934|gb|EEO30025.1| methyltransferase HemK MTase hemK [Oxalobacter formigenes OXCC13] Length = 279 Score = 115 bits (287), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 83/249 (33%), Positives = 125/249 (50%), Gaps = 13/249 (5%) Query: 16 GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75 G S ++I D L Q L++ + R + E + I G R+F+ + + D PR Sbjct: 33 GFSRVKLITHSDHPLTTEQAKALSDVVSRRVCGEPVAYITGKREFFGLSFAVCPDVLIPR 92 Query: 76 PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135 PETELLV+ AL LP K I+D+GTG+GA+ +A+ E P D+S KAL Sbjct: 93 PETELLVELALE-RLPHGGK-----IVDMGTGSGAIAIAIASERPDAHVFATDVSEKALN 146 Query: 136 IAKSNAVT--NGVSERFDTLQSDWFSSVEGL---FDVIVSNPPYIESVIVDCLGLEVRDF 190 +A NA+ G + +WF +++ + FD+IVSNPPYI+S ++R F Sbjct: 147 MATHNALALLKG-KQTVHFSAGNWFYALKNVNETFDLIVSNPPYIDSKDDHLQKGDLR-F 204 Query: 191 DPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAF 250 +P +L DGLS + + G +L + G +E GY+Q V V + V ++ Sbjct: 205 EPVGALTDHADGLSALKILVSGAQAYLKRGGWLLMEHGYDQAVAVRALLARAGFEEVQSW 264 Query: 251 KDYGGNDRV 259 KD G RV Sbjct: 265 KDLAGIGRV 273 >gi|86608445|ref|YP_477207.1| HemK family methyltransferase [Synechococcus sp. JA-2-3B'a(2-13)] gi|86556987|gb|ABD01944.1| methyltransferase, HemK family [Synechococcus sp. JA-2-3B'a(2-13)] Length = 247 Score = 115 bits (287), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 73/219 (33%), Positives = 111/219 (50%), Gaps = 13/219 (5%) Query: 50 SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA----LAFSLPRIEKRDVVRILDLG 105 + +LG ++ + L ++ PRPETELLV+ A A LP DLG Sbjct: 28 PLQYLLGKVEWAGLSLRVTPAVLIPRPETELLVEQASLWLQANPLPPGSC-----FADLG 82 Query: 106 TGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--- 162 TG+GA+ +AL + P + + VD S +AL +A N V + + ER + L WF ++ Sbjct: 83 TGSGAIAIALAHQHPQLRLLAVDSSPEALAVAADNVVAHHLQERVNLLLGSWFVPLDPWR 142 Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL 222 G +VSNPPYI S + L EVR +PR +LDGG DGL+H R + +L + Sbjct: 143 GRLRGLVSNPPYIPSADLASLMPEVRLHEPRQALDGGEDGLAHLRLLIQAAPDYLAPNSF 202 Query: 223 CSVEIGYNQKVDVVRIFESRKLF-LVNAFKDYGGNDRVL 260 +VE+ Q V ++R + + +D G +RV+ Sbjct: 203 WAVEVMRGQAPWVAEQLQARSCYRQIQVHRDLAGVERVV 241 >gi|189183834|ref|YP_001937619.1| possible protoporphyrinogen oxidase [Orientia tsutsugamushi str. Ikeda] gi|189180605|dbj|BAG40385.1| possible protoporphyrinogen oxidase [Orientia tsutsugamushi str. Ikeda] Length = 288 Score = 115 bits (287), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 73/261 (27%), Positives = 124/261 (47%), Gaps = 4/261 (1%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 +S L + G S ++ D +L + I K+ I ++G+++FY+ Sbjct: 25 ESRLLLAHIIGQSQEYILFHSDHLLLNSDYNQFLKMIKLRTKYLPIAYLIGYKEFYSRNF 84 Query: 66 TLSSDTFEPRPETELLVDSALA--FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 + PRP++E L+D+ + + + ++IL+LG G+G + + LL E Sbjct: 85 IVDKSVLIPRPDSETLIDAVVQDYRKIANYQPSAPIKILELGVGSGCLIITLLLELSNAI 144 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIESVIVD 181 GVG DIS AL IA N + + + +QS+WFS ++ +D+I++NPPY+ + Sbjct: 145 GVGSDISISALNIASRNRQKYKLEKSLNLVQSNWFSGLDVGEKYDIIIANPPYVSDSELR 204 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 L E +P I+L +GL Y+ IA + LN +G +E YN+ V + Sbjct: 205 ILSRETLLHEPHIALFSNNNGLQSYQEIAPLIPSFLNSNGRLYLECSYNKAEMVCALCFK 264 Query: 242 RKLFLVNAFKDYGGNDRVLLF 262 L L N + D+ R L F Sbjct: 265 SGLILENKYYDFNSYCRCLKF 285 >gi|302334926|ref|YP_003800133.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Olsenella uli DSM 7084] gi|301318766|gb|ADK67253.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Olsenella uli DSM 7084] Length = 524 Score = 114 bits (286), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 81/254 (31%), Positives = 118/254 (46%), Gaps = 15/254 (5%) Query: 10 FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69 L VTGLS Q+ D L + + +A+VR E + + G F ++ L Sbjct: 36 MLSNVTGLSRVQLYTSFDRPLSADELARMHDAVVRRGAGEPLQYVTGEMPFRHIVLHCEG 95 Query: 70 DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129 PRPETE+LVD+ LA ++L++GTGTG + ++ E P V D+ Sbjct: 96 GVLIPRPETEVLVDAVLAHVDVAAAAGHDAQVLEVGTGTGCIACSIASERPGSHVVATDL 155 Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIESVIVDCLGL 185 S A +A N G++ D + D S V+ G FDV+VSNPPYI S +V L Sbjct: 156 SPAAAALAMRNRDALGLARAVDVITCDLASGVDPALKGTFDVLVSNPPYIPSDVVPTLPR 215 Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245 EV F+P ++LDGG DGL +R + + L G+ + E +FE+ Sbjct: 216 EVVGFEPHLALDGGADGLDVFRRLLEVAPDMLRPGGMLACE-----------LFETNAEV 264 Query: 246 LVNAFKDYGGNDRV 259 + GG RV Sbjct: 265 AAELCRRQGGWARV 278 >gi|167587637|ref|ZP_02380025.1| modification methylase, HemK family protein [Burkholderia ubonensis Bu] Length = 280 Score = 114 bits (286), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 82/262 (31%), Positives = 127/262 (48%), Gaps = 15/262 (5%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDR--QRFFLTNAIVRSLKHESIHRILGWRDFYNV 63 D+ L G + Q+I D LD +R+ + A R E + +++G R+F+ Sbjct: 19 DARVLLAYALGWTRTQLITRGDEPLDAAAVERYLVLEA--RRAAGEPVAQLVGMREFFGR 76 Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 ++ D PRPETELLV++AL I+ +LDLGTG+GA+ +++ E P + Sbjct: 77 PFDVTPDVLIPRPETELLVEAALDA----IDGIPHPAVLDLGTGSGAIAVSIAAERPDAR 132 Query: 124 GVGVDISCKALEIAKSNAVTNGVSER----FDTLQSDWFSSVEG--LFDVIVSNPPYIES 177 +D S +AL +A+ NA + R LQSDW+++++ FD IVSNPPYI Sbjct: 133 VWALDRSGEALAVARRNADKLLDAHRPGGPLHWLQSDWYAALDPALAFDAIVSNPPYIAQ 192 Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237 ++R F+PR +L DGL+ R I G L G +E GY+Q V Sbjct: 193 YDPHLSQGDLR-FEPRGALTDDADGLAAIRAIVAGAGARLKPGGTLWIEHGYDQAEAVRA 251 Query: 238 IFESRKLFLVNAFKDYGGNDRV 259 + + V + D +R Sbjct: 252 LLAAHGFVSVESLADLAAIERT 273 >gi|186477470|ref|YP_001858940.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Burkholderia phymatum STM815] gi|184193929|gb|ACC71894.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Burkholderia phymatum STM815] Length = 283 Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 85/258 (32%), Positives = 130/258 (50%), Gaps = 14/258 (5%) Query: 10 FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69 L G ++I D LD Q N R E + +++G R+F+ + ++ Sbjct: 25 LLGHALGWRRTELITRADHPLDSAQVAAFRNLETRRAAGEPVAQLIGSREFFGLDFDVTR 84 Query: 70 DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129 D PRPETELLV++A+ +L R R+LDLGTGTGA+ +++ P + VD Sbjct: 85 DVLIPRPETELLVETAVQ-ALEEHGARS--RVLDLGTGTGAIAVSIAWSRPDARVWAVDR 141 Query: 130 SCKALEIAKSNAV------TNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVD 181 S +AL +A+ NAV G RF SDW+S+++ +F+VIVSNPPYI S Sbjct: 142 SEEALSVARRNAVRLLEPKRPGGDLRFAL--SDWYSALDASLVFEVIVSNPPYIASGDPH 199 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 ++R F+PR +L DGLS R I L +G+ +E GY+Q V + + Sbjct: 200 LSQGDLR-FEPRGALTDEADGLSAIRAIVASAPARLVPNGVLWMEHGYDQAQAVRAMLAA 258 Query: 242 RKLFLVNAFKDYGGNDRV 259 + + + D G +R+ Sbjct: 259 QGFADIRSECDLAGIERI 276 >gi|289207524|ref|YP_003459590.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Thioalkalivibrio sp. K90mix] gi|288943155|gb|ADC70854.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Thioalkalivibrio sp. K90mix] Length = 283 Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 90/256 (35%), Positives = 120/256 (46%), Gaps = 11/256 (4%) Query: 10 FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69 L TGL + +I QR R E I ILG R F+ + L +S Sbjct: 31 LLGAATGLDTSALIARGLEAPTASQRERADALCRRRETGEPIAHILGRRAFWTLDLGISP 90 Query: 70 DTFEPRPETELLVDSALAFSLPRIE--KRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 PRPETELLV+ A+A I+ +R R+LDLGTG+GA+ LAL E P + V Sbjct: 91 ACLIPRPETELLVERAIAA----IDACERAHPRVLDLGTGSGAIILALKAERPAIEAVAT 146 Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCLGL 185 D S AL A++NA G+ F LQ W + FDVIVSNPPYI Sbjct: 147 DRSPDALRQARANADALGLDVAF--LQGTWLDPFKPSDAFDVIVSNPPYIAPDDPHLTRG 204 Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245 ++R F+PR +L GL TI D HL +E G++Q DV E Sbjct: 205 DLR-FEPREALAAPEAGLGDLYTIIDTALTHLLPGAPLLLEHGFDQARDVRVCMEQEGYR 263 Query: 246 LVNAFKDYGGNDRVLL 261 V + +D G++R+ + Sbjct: 264 EVQSLRDPAGHERITI 279 >gi|77405502|ref|ZP_00782594.1| modification methylase, HemK family [Streptococcus agalactiae H36B] gi|77175899|gb|EAO78676.1| modification methylase, HemK family [Streptococcus agalactiae H36B] Length = 276 Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 82/248 (33%), Positives = 125/248 (50%), Gaps = 12/248 (4%) Query: 18 SSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPE 77 S+ +++ +S + D + + N + KH S I G F ++ + PRPE Sbjct: 35 STTDCLLNQNSSVSDTDQQLMENIFQQLKKHRSPQYITGKAYFRDLIFFVDERVLIPRPE 94 Query: 78 TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137 TE LVD L S ++E +LD+GTG+GA+ ++L KE P + + DIS AL++A Sbjct: 95 TEELVD--LILSENKVED---CSVLDIGTGSGAIAISLKKERPSWDVLASDISVSALDLA 149 Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197 K NA N ++SD FS++ FD+IVSNPPYI D +G V +P +L Sbjct: 150 KENA--NNCDAEVTFIESDVFSNISDKFDIIVSNPPYISYNDKDEVGKNVLASEPHSALF 207 Query: 198 GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN---AFKDYG 254 +GL+ YR I + +L G EIGY Q D+ + ++ F N KD Sbjct: 208 ADEEGLAIYRKIIENSREYLQPRGKLYFEIGYKQGDDLRSLL--KRYFPNNRCRVLKDIF 265 Query: 255 GNDRVLLF 262 G DR+++ Sbjct: 266 GKDRMVVL 273 >gi|319639481|ref|ZP_07994230.1| protein-(glutamine-N5) methyltransferase [Neisseria mucosa C102] gi|317399247|gb|EFV79919.1| protein-(glutamine-N5) methyltransferase [Neisseria mucosa C102] Length = 270 Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 81/221 (36%), Positives = 108/221 (48%), Gaps = 12/221 (5%) Query: 44 RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103 R LK E + +LG R+FY R ++ PRPETE LV++ L P+ R+ D Sbjct: 54 RRLKGEPMAYLLGEREFYGRRFAVNPHVLIPRPETEHLVEAVLKRLPPQ------GRVWD 107 Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS--- 160 LGTG+GA+ + + E DIS AL+ A+ NA G F Q WF + Sbjct: 108 LGTGSGAIAVTVALERVDADVRASDISVGALDTARQNAAELGAKVEF--AQGSWFDTDRP 165 Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220 EG +DVIVSNPPYIE ++R F+P+ +L DGLSH R I ++L + Sbjct: 166 SEGRYDVIVSNPPYIEDGDEHLSQGDLR-FEPQNALTDFSDGLSHIRHITQEAPKYLKAN 224 Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 G E GY+Q V I V +D G DRV L Sbjct: 225 GWLLFEHGYDQGEAVRNIMLENGFAEVATEQDLAGLDRVTL 265 >gi|220932632|ref|YP_002509540.1| modification methylase, HemK family [Halothermothrix orenii H 168] gi|219993942|gb|ACL70545.1| modification methylase, HemK family [Halothermothrix orenii H 168] Length = 285 Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 73/260 (28%), Positives = 133/260 (51%), Gaps = 7/260 (2%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L + + Q+ V D L +++ ++ + + + G ++F ++ Sbjct: 25 DAEVLLAHLLDMERIQLYVKYDLPLKNKEVEAYREMVINRARGIPVAYLTGHKEFMSLDF 84 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 ++ PRPETE+LV+ + SL + + D I+D+GTG+G + ++L P + + Sbjct: 85 KVNRSVLIPRPETEILVEEII--SLCQAKNIDNPNIVDVGTGSGVIAVSLAHYLPGARVL 142 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPYIESVIVD 181 G+DIS KALE+A++N + + ER ++ + + + +++VSNPPY+ + Sbjct: 143 GIDISDKALEVARTNIKRHNLGERVKVIKGNLLDPLIKMEKDNVNIVVSNPPYLTGNEMK 202 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 L LEV ++P +LDGG DGL YR + + L G+ +EIGY+Q + I Sbjct: 203 KLPLEV-TYEPSQALDGGADGLKIYRELIPRALKVLVPGGILGLEIGYHQADSIRDILSG 261 Query: 242 RKLFLVNAFKDYGGNDRVLL 261 + +DY G DRV++ Sbjct: 262 LPWGDIRVLQDYSGLDRVVI 281 >gi|332970820|gb|EGK09799.1| protein-(glutamine-N5) methyltransferase [Psychrobacter sp. 1501(2011)] Length = 300 Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 84/273 (30%), Positives = 135/273 (49%), Gaps = 25/273 (9%) Query: 10 FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69 +L + S +I D L + ++ I + + + G + F+++ ++ Sbjct: 28 WLLHILQKSPSFLITDGGYQLTEAEQAQFNTGIAQMQASTPLAYLTGKQAFWSLEFEVNE 87 Query: 70 DTFEPRPETELLVDSALAF------SLPRIEKRDVV---RILDLGTGTGAVCLALLKE-- 118 T PRP+TE+LV+ L + SL + ++ ++LDLGTG+G + ++L E Sbjct: 88 YTLIPRPDTEVLVEQVLDWITQHKNSLSVLNDEPILAPYQLLDLGTGSGCIAISLAHELA 147 Query: 119 ---SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-------EGLFDVI 168 ++ +D S +AL +AK NA N VS LQSDWFS++ + LFD+I Sbjct: 148 TIYPKQWQVTALDFSTEALAVAKRNAQLNAVS-NIQFLQSDWFSALKRSEDTDQPLFDII 206 Query: 169 VSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228 VSNPPYI + + L+ +P +L +GL + I + +L + GL +VE G Sbjct: 207 VSNPPYI---VDNDQHLDKLKAEPLSALVAPDNGLGDIKQIVEQARDYLVRGGLLAVEHG 263 Query: 229 YNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 Y+Q V ++F V KDYGGNDRV L Sbjct: 264 YDQGELVCQMFTDFGYAQVKTLKDYGGNDRVTL 296 >gi|160893850|ref|ZP_02074633.1| hypothetical protein CLOL250_01404 [Clostridium sp. L2-50] gi|156864502|gb|EDO57933.1| hypothetical protein CLOL250_01404 [Clostridium sp. L2-50] Length = 292 Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 73/215 (33%), Positives = 114/215 (53%), Gaps = 3/215 (1%) Query: 47 KHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGT 106 K + I G + F + D PR +TE+LV+ A L + D + +LD+ Sbjct: 77 KRIPLQYITGIQCFMGYDFETAPDVLIPRFDTEVLVEQA--NRLIQDIHSDKMSVLDMCC 134 Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFD 166 G+G + L++ + DIS A+ + NA VS+ + ++SD F ++ +D Sbjct: 135 GSGCIGLSVALMNQDIHIDLCDISDSAIALTTKNAKRLEVSD-YTVIKSDLFDKIDKRYD 193 Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE 226 +I+SNPPYIES ++D L EVRD++PR++LDG DGL YR I + +LN+ G E Sbjct: 194 MILSNPPYIESKVIDGLMPEVRDYEPRLALDGDADGLKFYRAIIENAESYLNEKGYILFE 253 Query: 227 IGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 IG +Q DV ++ + V KD NDRV++ Sbjct: 254 IGNHQAHDVQQLLVDKHFEDVRVVKDLAENDRVVI 288 >gi|241664383|ref|YP_002982743.1| modification methylase, HemK family [Ralstonia pickettii 12D] gi|240866410|gb|ACS64071.1| modification methylase, HemK family [Ralstonia pickettii 12D] Length = 300 Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 80/258 (31%), Positives = 122/258 (47%), Gaps = 11/258 (4%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 ++ + VTGLS Q+I +D R ++ R L E + +LG R+F+ Sbjct: 31 EARMLVSHVTGLSRVQLITQDACAIDVAARARISELAARRLAGEPMAYLLGEREFFGRTF 90 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 ++ PRP+TE+LV+ A L R+E+RD +LD+GTG+G + +++ + Sbjct: 91 KVTPAVLIPRPDTEVLVEQA----LDRLEERDAPAVLDMGTGSGIIAISIALARRDARVW 146 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-----LFDVIVSNPPYIESVIV 180 D S AL +A NA G + L DW+ ++ G FD+I SNPPYI + Sbjct: 147 ATDASADALAVAIDNAKALGATNVQAAL-GDWYGALAGTDAPPAFDLIASNPPYIAATDA 205 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 ++R F+P +L DGL H R+I G L G VE GY+Q V + Sbjct: 206 HLDQGDLR-FEPASALTDHDDGLRHLRSIVAGAPARLVSGGWLLVEHGYDQGEPVRALLG 264 Query: 241 SRKLFLVNAFKDYGGNDR 258 V +D G+DR Sbjct: 265 GAGFANVFTAQDLAGHDR 282 >gi|295109134|emb|CBL23087.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Ruminococcus obeum A2-162] Length = 290 Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 78/244 (31%), Positives = 118/244 (48%), Gaps = 13/244 (5%) Query: 27 DSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL 86 D +D + + +H + I G F + PR +TE+LV++AL Sbjct: 47 DETVDGKTEARYLEMCKKRAQHIPLQHITGRAFFMGYEFFVDERVLVPRQDTEVLVETAL 106 Query: 87 AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146 +++ +ILD+ TG+G + L+ L E G GVDIS AL +AK N V + Sbjct: 107 T----HLKECRAPKILDMCTGSGCILLSFLMERTDAVGTGVDISEGALAVAKQNRVHLQL 162 Query: 147 SERFDTLQSDWFS---------SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197 +R + +QSD FS + +D+++SNPPYI S + L EVR DP ++LD Sbjct: 163 EDRAEFVQSDLFSGDYFKKNSGNTVTEYDMLISNPPYIPSGEIPGLMEEVRSHDPVLALD 222 Query: 198 GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGND 257 G DGL YR I ++L G EIG +Q V +I ++ V +D G D Sbjct: 223 GKEDGLFFYREITAQADKYLRAGGWLMYEIGCDQGESVSKIMKTDNFINVEVIQDLAGLD 282 Query: 258 RVLL 261 RV++ Sbjct: 283 RVVI 286 >gi|40062806|gb|AAR37690.1| modification methylase, HemK family [uncultured marine bacterium 440] Length = 279 Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 76/238 (31%), Positives = 132/238 (55%), Gaps = 9/238 (3%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L + G+ +I + + + ++ AI R +K E + I+G ++F++ Sbjct: 25 DAQIILSDIMGMKREFLITNNEINISEKVMKKYDIAIKRRIKREPVAYIIGKKEFWSQDF 84 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 +++ T PRPE+ELL+ +++ E R + ILD+GTG+G + L+LLKE P +G+ Sbjct: 85 RVNNSTLIPRPESELLIYKLVSY----FENRRI-NILDIGTGSGCILLSLLKELPLTRGI 139 Query: 126 GVDISCKALEIAKSNAVTNGV--SERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183 G+DIS KA++ AKSN+ + +F + D F+ G +D+IV+NPPYI + L Sbjct: 140 GIDISAKAVKTAKSNSKKLNLFFRSKFKVVDIDNFNI--GRYDLIVANPPYIALKDMKNL 197 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 ++ +++P I+L GG DGL + + L +GL +E+G NQ V +I + Sbjct: 198 SKDILNYEPLIALKGGYDGLDLIKKVIYKSKHLLKANGLLGIEVGTNQYVQASKILKK 255 >gi|319795451|ref|YP_004157091.1| protein-(glutamine-n5) methyltransferase, release factor-specific [Variovorax paradoxus EPS] gi|315597914|gb|ADU38980.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Variovorax paradoxus EPS] Length = 282 Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 78/256 (30%), Positives = 118/256 (46%), Gaps = 12/256 (4%) Query: 6 DSHSFLCRVTGLSSHQ---VIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 D+ L G + H ++ + D L + R L E + +LG ++F+ Sbjct: 26 DAQLLLLHALGRAPHDRAWLLAHDTDAMSDAAWVALAAQLSRRLTGEPVAYLLGTKEFHG 85 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L + + PRP+TE LVD ++L +E R+ R+LDLGTG+GA+ LAL P Sbjct: 86 LDLQVDARVLVPRPDTETLVD----WALQCLEDRNAPRVLDLGTGSGAIALALQHARPDA 141 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182 + VD S AL +A++NA G+ RF + W + I SNPPYI + + Sbjct: 142 QVDAVDASADALAVAEANARRLGLPVRFAL--AHWLDGAADGYTAIASNPPYIAA---ND 196 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 L +P +L G DGL R I HL + G +E G++Q V ++ E R Sbjct: 197 PHLPALRHEPSSALVAGADGLDDIRQIVQNAPDHLAEGGWLLLEHGHDQAAAVRQLLEYR 256 Query: 243 KLFLVNAFKDYGGNDR 258 V + D G R Sbjct: 257 GFAEVQSRDDLAGIQR 272 >gi|296282002|ref|ZP_06860000.1| HemK family modification methylase [Citromicrobium bathyomarinum JL354] Length = 292 Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 83/266 (31%), Positives = 132/266 (49%), Gaps = 26/266 (9%) Query: 7 SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66 +H+ C + + H + D V D F R L HE + I G +FY L Sbjct: 36 AHALGCSRSAMLLHHMR---DPVPDGFAPLF-----ARRLGHEPVAYITGSAEFYGFELK 87 Query: 67 LSSDTFEPRPETELLVDSALA-FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 ++ PR ++E L+D+A F +R ILDLGTG+GA+ LA L + P +G+ Sbjct: 88 VTPAVLIPRGDSETLIDAAQEHFGTGEPPQR----ILDLGTGSGALLLAALYQWPEAEGI 143 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDW----FSSVEGLFDVIVSNPPYIE--SVI 179 G+D S AL +A+ NA G++ER L+ W + G FD+++ NPPY+E + + Sbjct: 144 GLDASMPALRVAQCNARKLGLAERARFLRRSWRRDGWQRDLGTFDLVLCNPPYVEDDASL 203 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 C VR+ +P +L G +GL YR + ++ L DG+ EIG Q V + Sbjct: 204 DPC----VREHEPGSALFAGPEGLDDYRILLPQIAPLLTPDGIAIFEIGGTQHEAVAALA 259 Query: 240 ESRKLFLVNAF-KDYGGNDRVLLFCR 264 +++ L NA +D G+ R ++ + Sbjct: 260 QNQG--LENAMRRDLNGHPRAMIMSQ 283 >gi|71892128|ref|YP_277860.1| N5-glutamine methyltransferase [Candidatus Blochmannia pennsylvanicus str. BPEN] gi|71796234|gb|AAZ40985.1| N5-glutamine methyltransferase [Candidatus Blochmannia pennsylvanicus str. BPEN] Length = 278 Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 84/257 (32%), Positives = 131/257 (50%), Gaps = 10/257 (3%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 RD+ L +VT S Q++ +S+L+ L + I R K E I ++G ++F+++ Sbjct: 22 RDAEIILGQVTKKSRAQLLAFGESLLEYDTIIQLKSLIYRRKKGEPIAYLVGSKEFWSLD 81 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L +S TF PRP+TE LV F L ++ +V LDLGTG G + LAL E P + Sbjct: 82 LKVSPGTFIPRPDTECLVKH--VFDLLKVSHLNV---LDLGTGVGTIALALASERPNWNI 136 Query: 125 VGVDISCKALEIAKSNA-VTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDC 182 G+D KAL +A N + N + +F + DWF + F++IVSNPPYI+ C Sbjct: 137 TGIDCQKKALFLAHKNKLLLNFKNVKF--IYGDWFKYLRNKKFNLIVSNPPYIDKN-DSC 193 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 L F+P+ +L GL I ++HL ++G +E G+NQ + +F Sbjct: 194 LQFRDMIFEPKNALVSKQKGLEDLTVICKYSTQHLRQNGWLVLEHGWNQGNYMRALFFKF 253 Query: 243 KLFLVNAFKDYGGNDRV 259 ++ +DY +RV Sbjct: 254 GFTHIHTIRDYHHYERV 270 >gi|170728013|ref|YP_001762039.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Shewanella woodyi ATCC 51908] gi|169813360|gb|ACA87944.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Shewanella woodyi ATCC 51908] Length = 280 Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 79/237 (33%), Positives = 120/237 (50%), Gaps = 8/237 (3%) Query: 26 PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85 PD L Q T + R + I I+G R+F+++ ++ T PRP+TE+LV++A Sbjct: 46 PDERLTSEQIDDYTKMVGRRVIGTPIAHIVGEREFWSLPFMVNPTTLIPRPDTEILVETA 105 Query: 86 LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145 L L + ++LDLGTGTGA+ L+L E P ++ VD +A+ +AK+N Sbjct: 106 LNLPL-----AEAAKVLDLGTGTGAIALSLAYEKPSWQITAVDKIIEAVALAKANRSHLK 160 Query: 146 VSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204 + + D +QSDWF SV F++IVSNPPYI+ +VR F+P +L G + Sbjct: 161 LPQ-VDIIQSDWFDSVNCYDFNLIVSNPPYIDEEDSHLEEGDVR-FEPHSALTAPEHGFA 218 Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 IAD +L G +E G+ Q + + V +D+G NDR L Sbjct: 219 DLYHIADCARDYLAPGGYLLLEHGFGQALQLRDKMIELGYENVATVRDFGSNDRCTL 275 >gi|123965585|ref|YP_001010666.1| putative protein methyltransferase [Prochlorococcus marinus str. MIT 9515] gi|123199951|gb|ABM71559.1| putative protein methyltransferase [Prochlorococcus marinus str. MIT 9515] Length = 289 Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 71/230 (30%), Positives = 113/230 (49%), Gaps = 9/230 (3%) Query: 32 DRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLP 91 D FF + ++ + + I WR N++L +S PRPETEL+V+ S Sbjct: 59 DSLEFFWGKHLSTNIPIQYLSGICYWR---NLKLEVSDKVLIPRPETELVVE---IISRK 112 Query: 92 RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151 + + DLGTG+GA+ ++L E+P + G+ DI+ A+EIA N N Sbjct: 113 FDNNKGQIIFADLGTGSGAISISLALENPSWNGIATDINKNAVEIASRNFANNSNQSNLK 172 Query: 152 TLQSDWF---SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208 +W+ + ++G D V+NPPYI + L +EV++F+P+ +L GG DGL H R Sbjct: 173 FYSGNWWEPLTYLKGEIDFAVANPPYIPKNTYEELPIEVKNFEPKNALLGGEDGLDHVRE 232 Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258 I +L + G +E ++Q V ++F + V KD G R Sbjct: 233 IVKYAPLYLKEKGWLLIENHFDQGARVKQLFIENQFTDVEVLKDLSGIGR 282 >gi|76786890|ref|YP_329783.1| HemK family modification methylase [Streptococcus agalactiae A909] gi|77408686|ref|ZP_00785419.1| modification methylase, HemK family [Streptococcus agalactiae COH1] gi|76561947|gb|ABA44531.1| modification methylase, HemK family [Streptococcus agalactiae A909] gi|77172734|gb|EAO75870.1| modification methylase, HemK family [Streptococcus agalactiae COH1] Length = 276 Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 82/248 (33%), Positives = 125/248 (50%), Gaps = 12/248 (4%) Query: 18 SSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPE 77 S+ +++ +S + D + + N + KH S I G F ++ + PRPE Sbjct: 35 STTDYLLNQNSSVSDTDQQLMENIFQQLKKHRSPQYITGKAYFRDLIFFVDERVLIPRPE 94 Query: 78 TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137 TE LVD L S ++E +LD+GTG+GA+ ++L KE P + + DIS AL++A Sbjct: 95 TEELVD--LILSENKVED---CSVLDIGTGSGAIAISLKKERPSWDVLASDISVSALDLA 149 Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197 K NA N ++SD FS++ FD+IVSNPPYI D +G V +P +L Sbjct: 150 KENA--NNCDAEVTFIESDVFSNISDKFDIIVSNPPYISYNDKDEVGKNVLASEPHSALF 207 Query: 198 GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN---AFKDYG 254 +GL+ YR I + +L G EIGY Q D+ + ++ F N KD Sbjct: 208 ADEEGLAIYRKIIENSREYLQPRGKLYFEIGYKQGDDLRSLL--KRYFPNNRCRVLKDIF 265 Query: 255 GNDRVLLF 262 G DR+++ Sbjct: 266 GKDRMVVL 273 >gi|148657628|ref|YP_001277833.1| HemK family modification methylase [Roseiflexus sp. RS-1] gi|148569738|gb|ABQ91883.1| modification methylase, HemK family [Roseiflexus sp. RS-1] Length = 285 Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 76/259 (29%), Positives = 124/259 (47%), Gaps = 11/259 (4%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L G S +V+ + D I+R E + ++G ++FY + Sbjct: 31 DAEVLLAHTLGWSRARVLSRLEEPFTDESLHQFRTLILRRAAREPVAYLVGRKEFYGLEF 90 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 + PRPETE LVD+AL ++ R + I D+GTG+G + +AL P Sbjct: 91 VVDRRVLVPRPETETLVDAALEWAKHRPAP---LVIADIGTGSGCIAVALAVHLPQAHIY 147 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185 +D+S AL +A+ N + + V L D + + D++VSNPPY +++ + Sbjct: 148 AIDLSRDALAVARQNVIRHHVDASVTLLNGDLLAPLPQPVDLLVSNPPY---TVLNEVDP 204 Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245 VR +P ++LDGG DGL+ YR + L G +EIG Q VV + +R+ F Sbjct: 205 GVRMHEPHLALDGGSDGLAVYRRLFAAAPSALRPGGALMLEIGATQARAVVDL--ARQAF 262 Query: 246 ---LVNAFKDYGGNDRVLL 261 ++ +D G DRV++ Sbjct: 263 PEAVIRVRQDLAGRDRVVI 281 >gi|288554406|ref|YP_003426341.1| modification methylase, HemK family protein [Bacillus pseudofirmus OF4] gi|288545566|gb|ADC49449.1| modification methylase, HemK family protein [Bacillus pseudofirmus OF4] Length = 293 Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 75/222 (33%), Positives = 115/222 (51%), Gaps = 21/222 (9%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110 + ++G+++FY R ++ D PRPETE L++ L + V +LD+G G+GA Sbjct: 76 VQHLMGYQEFYGRRFQVNGDVLIPRPETEELIEHVLHLK-QSLWGDASVDVLDVGAGSGA 134 Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS---VEGLFDV 167 + + L E K VDIS +ALEIA+ NA T + + +SD S+ +E FD+ Sbjct: 135 IGVTLALECAEMKVEAVDISKEALEIARLNAET--LDAKMSFFESDLLSTPIQMEKRFDI 192 Query: 168 IVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227 IVSNPPYI D L + VR+ +P ++L GG DG YR + + + + + GL + E+ Sbjct: 193 IVSNPPYIPLGEHDELAVHVREHEPHLALFGGEDGYELYRRLTTELPKVMKEKGLIAFEV 252 Query: 228 GYNQKVDVVRIFESRKLFLVNAFK--------DYGGNDRVLL 261 G Q E+ +L L AF D G DR++ Sbjct: 253 GAGQG-------ETVRLMLETAFPNAETEVKLDINGKDRMVF 287 >gi|288574778|ref|ZP_06393135.1| modification methylase, HemK family [Dethiosulfovibrio peptidovorans DSM 11002] gi|288570519|gb|EFC92076.1| modification methylase, HemK family [Dethiosulfovibrio peptidovorans DSM 11002] Length = 282 Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 78/231 (33%), Positives = 107/231 (46%), Gaps = 10/231 (4%) Query: 37 FLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR 96 + A+ R E +H ILG F+ L++ S T PRPETE LV+ AL + Sbjct: 58 LMKEAVFRRKGREPLHYILGSCPFWGKTLSVRSGTLIPRPETEFLVEVALNYF------- 110 Query: 97 DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 D +D GTG+G + A+L + P + VD A+E+A N G R Sbjct: 111 DGGTFVDWGTGSGCITCAILSDRPDASCIAVDSEASAIEVAYGNLRREGFLNRCLLWHGS 170 Query: 157 WFSSVE---GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213 S+ G D+IVSNPPYI S V L EV ++PR +LDGG DGL YR + Sbjct: 171 TPESIPVASGTVDLIVSNPPYIPSEDVPSLMPEVARYEPRSALDGGRDGLDPYRMLLPWA 230 Query: 214 SRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 R L GL VE G +V + + L+ D G R++ + R Sbjct: 231 KRTLRPGGLLWVEFGGADQVRPLEEMAPSGMSLLEVRNDLSGIPRLMGWRR 281 >gi|69249627|ref|ZP_00605025.1| Modification methylase HemK [Enterococcus faecium DO] gi|257880057|ref|ZP_05659710.1| modification methylase HemK [Enterococcus faecium 1,230,933] gi|257882293|ref|ZP_05661946.1| modification methylase HemK [Enterococcus faecium 1,231,502] gi|257891148|ref|ZP_05670801.1| modification methylase HemK [Enterococcus faecium 1,231,410] gi|257893962|ref|ZP_05673615.1| modification methylase HemK [Enterococcus faecium 1,231,408] gi|68194106|gb|EAN08646.1| Modification methylase HemK [Enterococcus faecium DO] gi|257814285|gb|EEV43043.1| modification methylase HemK [Enterococcus faecium 1,230,933] gi|257817951|gb|EEV45279.1| modification methylase HemK [Enterococcus faecium 1,231,502] gi|257827508|gb|EEV54134.1| modification methylase HemK [Enterococcus faecium 1,231,410] gi|257830341|gb|EEV56948.1| modification methylase HemK [Enterococcus faecium 1,231,408] Length = 290 Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 82/241 (34%), Positives = 126/241 (52%), Gaps = 20/241 (8%) Query: 27 DSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL 86 + + ++ QR T+ + H + +LG+ DFY+ RL ++ T PRPETE LV+ L Sbjct: 59 EEISEEEQRLIETDLRLLLADHPPQY-LLGYADFYDHRLKVTEATLIPRPETEELVEWCL 117 Query: 87 AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146 P + + ++D+GTGTGA+ ++L + VD+S +ALE+AK NA G Sbjct: 118 D-ETPGVP----LEVIDIGTGTGAIAISLKAARKNWHISAVDLSEEALEVAKENAQKEGT 172 Query: 147 SERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203 F DTL ++ FDVI+SNPPYI + + VR F+P+++L DGL Sbjct: 173 KISFYHGDTLGP----VMDQQFDVIISNPPYISRNEWELMDESVRSFEPKMALFAENDGL 228 Query: 204 SHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES----RKLFLVNAFKDYGGNDRV 259 + Y IA L +G +EIG+ Q V +IF+ +K V KD GN+R+ Sbjct: 229 AIYEKIAVEAPSVLKSNGKIFLEIGFRQGEAVKKIFQQAFPDKK---VAIKKDLFGNERM 285 Query: 260 L 260 + Sbjct: 286 I 286 >gi|160946321|ref|ZP_02093530.1| hypothetical protein PEPMIC_00281 [Parvimonas micra ATCC 33270] gi|158447437|gb|EDP24432.1| hypothetical protein PEPMIC_00281 [Parvimonas micra ATCC 33270] Length = 266 Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 87/255 (34%), Positives = 133/255 (52%), Gaps = 10/255 (3%) Query: 11 LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70 L +TG S ++ +D +D FL I + ++ + I G +FY + L + Sbjct: 20 LEYLTGKKSVELKMDLRFCVDSIYNDFLE-IIEKRKQNYPLQYIFGKWEFYGLELFVDES 78 Query: 71 TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130 PR ETE+LVD + + K+D +ILD+G G+GA+ LAL K GVDIS Sbjct: 79 ALIPRFETEILVDEIVKLNC----KKD--KILDIGCGSGAISLALAKNLYKSYIYGVDIS 132 Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRD 189 +A+ ++ N + + +SD FS V E FD+IVSNPPYI+ + L E+ Sbjct: 133 KEAINLSNKNKEKLNL-QNIKFFESDIFSKVDEKHFDIIVSNPPYIDDAEMKTLEKEL-S 190 Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249 F+P+ +L GG DGL YR I +L++ G+ + EIGYNQ + + ++ A Sbjct: 191 FEPQNALYGGQDGLFFYREIIINSLDYLSEKGVLAFEIGYNQMEIISNLLIENGFEILIA 250 Query: 250 FKDYGGNDRVLLFCR 264 KD+ G DR+L+ R Sbjct: 251 KKDFAGFDRILIAKR 265 >gi|148238860|ref|YP_001224247.1| protoporphyrinogen oxidase [Synechococcus sp. WH 7803] gi|147847399|emb|CAK22950.1| Protoporphyrinogen oxidase [Synechococcus sp. WH 7803] Length = 299 Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 80/227 (35%), Positives = 114/227 (50%), Gaps = 13/227 (5%) Query: 47 KHESIHRILG---WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI-- 101 +H + ++G WRD V L +S PR ETELL+D AL P E + + Sbjct: 73 EHVPLQHLVGRCPWRD---VELQVSPAALIPRQETELLIDLALQCLKPS-ESEALPQAGV 128 Query: 102 -LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 DLGTG+GA+ +AL + P ++G VD+S +ALE+A++N + S + Q W+ Sbjct: 129 WADLGTGSGALAVALARSLPGWEGHAVDLSAEALELARANLRSLAPSPCWTLHQGSWWEP 188 Query: 161 VE---GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217 +E G ++VSNPPYI V V L VRD +P ++L GG DGL R + G R L Sbjct: 189 LEPWWGTVHLVVSNPPYIPRVQVQGLEPVVRDHEPHLALSGGDDGLDCCRALISGAPRAL 248 Query: 218 NKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 G +E ++Q V+ + L V A D G R L R Sbjct: 249 APGGWLLLEHHHDQSEAVLVLLRDAGLEAVQARPDLQGVMRFALARR 295 >gi|237737786|ref|ZP_04568267.1| methyltransferase [Fusobacterium mortiferum ATCC 9817] gi|229419666|gb|EEO34713.1| methyltransferase [Fusobacterium mortiferum ATCC 9817] Length = 378 Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 76/232 (32%), Positives = 116/232 (50%), Gaps = 17/232 (7%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA--LAFSLPRIEKRDVV 99 + R + + + +LG +FY + PR +TE+LV+ L LP Sbjct: 151 VARGKERKPLQYLLGEWEFYGYPFKVDERVLIPRADTEILVEQCKYLVNELPS------P 204 Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV-------SERFDT 152 +I+D+GTG+GA+ ++L KE P +G+DIS ALE+A N N S+ F Sbjct: 205 KIMDIGTGSGAIAISLAKELPNTHVLGLDISEGALEVATQNRDINEATNVKFLKSDVFSI 264 Query: 153 LQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212 L+ + + +V+ F++IVSNPPYI + L EV ++P+ +L DG Y I+ Sbjct: 265 LRDEKYKNVK--FNLIVSNPPYIPTEEYVELMPEVLKYEPKNALTDNGDGYYFYEKISKE 322 Query: 213 VSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 L KDG E+GYNQ V +++ KDYGG DRV++ R Sbjct: 323 AKEFLTKDGYLVFEVGYNQAEKVADFMRENGFDVLSIVKDYGGIDRVVIGKR 374 >gi|293567648|ref|ZP_06678991.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Enterococcus faecium E1071] gi|291589583|gb|EFF21388.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Enterococcus faecium E1071] Length = 279 Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 81/241 (33%), Positives = 127/241 (52%), Gaps = 20/241 (8%) Query: 27 DSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL 86 + + ++ QR T+ + H + +LG+ DFY+ RL ++ T PRPETE LV+ L Sbjct: 48 EEISEEEQRLIETDLRLLLADHPPQY-LLGYADFYDHRLKVTEATLIPRPETEELVEWCL 106 Query: 87 AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146 P + + ++D+GTGTGA+ ++L + VD+S +ALE+AK NA G Sbjct: 107 D-ETPGVP----LEVIDIGTGTGAIAISLKAARKNWHVSAVDLSEEALEVAKENAQKEGT 161 Query: 147 SERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203 F DTL ++ FDVI+SNPPYI + + VR F+P+++L DGL Sbjct: 162 KISFYHGDTLGP----VMDQQFDVIISNPPYISRNEWELMDESVRSFEPKMALFAENDGL 217 Query: 204 SHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES----RKLFLVNAFKDYGGNDRV 259 + Y IA L +G +EIG+ Q V +IF+ +K+ + KD GN+R+ Sbjct: 218 AIYEKIAVEAPSVLKSNGKIFLEIGFRQGEAVKKIFQQAFPDKKVAIK---KDLFGNERM 274 Query: 260 L 260 + Sbjct: 275 I 275 >gi|322411679|gb|EFY02587.1| putative methyltransferase [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 279 Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 80/220 (36%), Positives = 116/220 (52%), Gaps = 16/220 (7%) Query: 47 KHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLG 105 +H S + G F +++L++ PRPETE LVD LA E D + LD+G Sbjct: 64 QHLSPQYLTGRAYFRDLQLSVDQRVLIPRPETEELVDLILA------ENPDTPLSALDIG 117 Query: 106 TGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF 165 TG+GA+ ++L KE P ++ DIS AL +A+ NA + F + SD FS + G F Sbjct: 118 TGSGAIAISLKKERPAWQLTASDISSDALSLAQDNASHYQLDITF--IVSDVFSQLSGTF 175 Query: 166 DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225 D+IVSNPPYI D +GL V +P ++L DG + YR I + S +L++ G Sbjct: 176 DMIVSNPPYIAYEDKDEVGLNVYQSEPHLALFAAEDGYAIYRRIIEEASNYLSEKGKLYF 235 Query: 226 EIGYNQ----KVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 EIGY Q K V F ++ V KD G +R+++ Sbjct: 236 EIGYKQGEGIKALVNIHFPQKR---VRVLKDVFGKERMVV 272 >gi|74318512|ref|YP_316252.1| modification methylase HemK [Thiobacillus denitrificans ATCC 25259] gi|74058007|gb|AAZ98447.1| modification methylase HemK [Thiobacillus denitrificans ATCC 25259] Length = 287 Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 82/219 (37%), Positives = 111/219 (50%), Gaps = 8/219 (3%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101 + R L E I I+G R+FY R +S PRPETELLV+ ALA RI + + Sbjct: 69 LARRLGGEPIAYIVGAREFYGRRFEVSPAVLIPRPETELLVELALA----RIPPDETTTV 124 Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 LDLGTG+G + + L E + V+ S AL +A+ NA T G S F DWFS + Sbjct: 125 LDLGTGSGCIAITLALERSRARVTAVERSPAALALARRNAQTLGASVEFSA--GDWFSDL 182 Query: 162 EGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220 G +D+IV+NPPYI ++R +P +L G DGL R + DG HL + Sbjct: 183 TGRSYDLIVANPPYIADADPHLARGDLR-HEPVAALASGADGLDELRRLIDGARDHLRRP 241 Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRV 259 G+ +E GY+Q V + S + D GN RV Sbjct: 242 GMLLLEHGYDQADAVHALLRSGGFARPRCWHDLAGNPRV 280 >gi|332522646|ref|ZP_08398898.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptococcus porcinus str. Jelinkova 176] gi|332313910|gb|EGJ26895.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptococcus porcinus str. Jelinkova 176] Length = 276 Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 71/182 (39%), Positives = 103/182 (56%), Gaps = 7/182 (3%) Query: 50 SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109 S I G F ++ LT++ PRPETE LV LA + +R+ +++LD+GTG+G Sbjct: 67 SPQYITGKAYFRDLILTVNESVLIPRPETEELVALILAEN-----EREDLQLLDIGTGSG 121 Query: 110 AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIV 169 A+ ++L KE P +K V DIS +A+++A+ NA F QSD FSS+ G FD+IV Sbjct: 122 AIAISLKKERPTWKVVASDISQEAIQVAQFNAWNMETEITFR--QSDLFSSLSGKFDIIV 179 Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY 229 SNPPYI +G V +P ++L GL+ YR+I + +L+ G EIGY Sbjct: 180 SNPPYIAFADKKEVGRNVLVSEPHLALFAEEGGLAMYRSILEQAEHYLSPQGKIYFEIGY 239 Query: 230 NQ 231 Q Sbjct: 240 KQ 241 >gi|258614611|ref|ZP_05712381.1| hemK protein [Enterococcus faecium DO] gi|260560330|ref|ZP_05832506.1| modification methylase HemK [Enterococcus faecium C68] gi|293563061|ref|ZP_06677527.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Enterococcus faecium E1162] gi|294623634|ref|ZP_06702472.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Enterococcus faecium U0317] gi|314947686|ref|ZP_07851095.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecium TX0082] gi|260073675|gb|EEW62001.1| modification methylase HemK [Enterococcus faecium C68] gi|291596960|gb|EFF28173.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Enterococcus faecium U0317] gi|291604975|gb|EFF34443.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Enterococcus faecium E1162] gi|313645927|gb|EFS10507.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecium TX0082] Length = 279 Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 82/241 (34%), Positives = 126/241 (52%), Gaps = 20/241 (8%) Query: 27 DSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL 86 + + ++ QR T+ + H + +LG+ DFY+ RL ++ T PRPETE LV+ L Sbjct: 48 EEISEEEQRLIETDLRLLLADHPPQY-LLGYADFYDHRLKVTEATLIPRPETEELVEWCL 106 Query: 87 AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146 P + + ++D+GTGTGA+ ++L + VD+S +ALE+AK NA G Sbjct: 107 D-ETPGVP----LEVIDIGTGTGAIAISLKAARKNWHISAVDLSEEALEVAKENAQKEGT 161 Query: 147 SERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203 F DTL ++ FDVI+SNPPYI + + VR F+P+++L DGL Sbjct: 162 KISFYHGDTLGP----VMDQQFDVIISNPPYISRNEWELMDESVRSFEPKMALFAENDGL 217 Query: 204 SHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES----RKLFLVNAFKDYGGNDRV 259 + Y IA L +G +EIG+ Q V +IF+ +K V KD GN+R+ Sbjct: 218 AIYEKIAVEAPSVLKSNGKIFLEIGFRQGEAVKKIFQQAFPDKK---VAIKKDLFGNERM 274 Query: 260 L 260 + Sbjct: 275 I 275 >gi|91081733|ref|XP_972117.1| PREDICTED: similar to HemK methyltransferase family member 1 [Tribolium castaneum] Length = 328 Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 71/204 (34%), Positives = 112/204 (54%), Gaps = 9/204 (4%) Query: 27 DSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL 86 D VLD+ + + + ++ L+ + +LG F + L +S F PRPETE LVD L Sbjct: 89 DMVLDEDRVKLVESLCLKRLQKLPVQYVLGECYFRQLVLKMSPPVFIPRPETEQLVDIVL 148 Query: 87 AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146 I++++ L+L G+GA+ L+LL+E P KG +D S A + K NA G+ Sbjct: 149 G----EIDRKNCRHFLELCCGSGAIALSLLQERPQIKGTALDQSKAACHLTKENAQKAGL 204 Query: 147 SERFDTLQSD---WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203 ++R +QS W + FD+IVSNPPY+ S +D L E++ ++ +LDGG+DGL Sbjct: 205 NKRIRIIQSQLAQWHRCEK--FDIIVSNPPYVFSKDLDKLQPEIKLYEDLQALDGGVDGL 262 Query: 204 SHYRTIADGVSRHLNKDGLCSVEI 227 + I + S LN +G +E+ Sbjct: 263 KVIKQILELSSECLNMNGKLFLEV 286 >gi|19746089|ref|NP_607225.1| protoporphyrinogen oxidase [Streptococcus pyogenes MGAS8232] gi|19748261|gb|AAL97724.1| putative protoporphyrinogen oxidase [Streptococcus pyogenes MGAS8232] Length = 279 Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 70/185 (37%), Positives = 102/185 (55%), Gaps = 7/185 (3%) Query: 47 KHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGT 106 +H S I G F +++L + PRPETE LVD LA +L + +LD+GT Sbjct: 64 QHLSPQYITGNAYFRDLKLAVDKRVLIPRPETEELVDMILAENLDA-----PLNVLDIGT 118 Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFD 166 G+GA+ ++L KE P ++ DIS AL++AK NA + F ++SD FS + G FD Sbjct: 119 GSGAIAISLKKERPNWQVTASDISRAALDLAKVNADAYQLDITF--IESDVFSLISGTFD 176 Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE 226 +IVSNPPYI + + L V +P ++L +G + YR I + +L K+G E Sbjct: 177 IIVSNPPYISYEDKEEVSLNVLQSEPHLALFAKENGYAIYRKIIEQADNYLTKEGKLYFE 236 Query: 227 IGYNQ 231 IGY Q Sbjct: 237 IGYKQ 241 >gi|327484700|gb|AEA79107.1| Methylase of polypeptide chain release factor [Vibrio cholerae LMA3894-4] Length = 256 Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 82/234 (35%), Positives = 117/234 (50%), Gaps = 13/234 (5%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ LC V ++ PD L+ L + R E + ILG R+F+++ L Sbjct: 27 DAAVLLCHVLAKPRSYLLTWPDKTLEKPTLASLELLLARRRAGEPMAYILGEREFWSLPL 86 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV--RILDLGTGTGAVCLALLKESPFFK 123 +S T PRP+TE LV+ AL +K ++ +LDLGTGTGA+ LAL E P + Sbjct: 87 KVSPSTLIPRPDTERLVELAL-------DKAALIDGELLDLGTGTGAIALALASELPTRQ 139 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIESVIVD 181 G+D+ +A E+A+ NA + LQ WFS + F +IVSNPPYIE Sbjct: 140 VTGIDLRPEAAELARENATRLAI-HNAQFLQGSWFSPLADGTKFALIVSNPPYIEENDPH 198 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235 +VR F+P+ +L +GL+ R I+ R L G E GY+Q V V Sbjct: 199 LSLGDVR-FEPKSALVAAENGLADIRHISTHAPRFLLDGGWLLFEHGYDQGVAV 251 >gi|317487379|ref|ZP_07946169.1| protein-(glutamine-N5) methyltransferase [Bilophila wadsworthia 3_1_6] gi|316921375|gb|EFV42671.1| protein-(glutamine-N5) methyltransferase [Bilophila wadsworthia 3_1_6] Length = 315 Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 83/282 (29%), Positives = 125/282 (44%), Gaps = 38/282 (13%) Query: 10 FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69 L V G+S ++ P++ L Q +T + R E +LG R+FY ++ Sbjct: 32 ILQHVCGISRVELATRPETFLTSDQLSRMTGLLRRRADGEPAAYLLGQREFYGRDFRVTP 91 Query: 70 DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129 T PRPETE L+++AL DLGTG+G + + L E P ++G+ VD+ Sbjct: 92 ATLIPRPETEHLIEAALKGC------DGPASFADLGTGSGCIAVTLCAERPDWRGLMVDL 145 Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVDCLGLEV 187 S +AL +A NAV + V +R +++D+ + D++VSNPPY+ + L EV Sbjct: 146 SGRALAVACQNAVRHDVRQRLQPVRADFTRPLLRPESLDLLVSNPPYVGKTEYEGLSAEV 205 Query: 188 RDFDPRISL------------------------------DGGIDGLSHYRTIADGVSRHL 217 RDF+P +L +GL H +A L Sbjct: 206 RDFEPVTALVPNFVDSDKIPSHDHHHDHGGSHSHVPSTPPDKPEGLEHLIAVAQEAFVAL 265 Query: 218 NKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRV 259 GL +E GY Q + + ES K V KD G+DRV Sbjct: 266 KPGGLLLMEHGYAQGAAIKVLLESHKWENVLILKDLSGHDRV 307 >gi|294787799|ref|ZP_06753043.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Simonsiella muelleri ATCC 29453] gi|294484092|gb|EFG31775.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Simonsiella muelleri ATCC 29453] Length = 276 Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 80/260 (30%), Positives = 127/260 (48%), Gaps = 15/260 (5%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 +S L +TG + Q+I +L ++Q L R + E + +LG R+FY Sbjct: 18 ESRMLLQHITGYTRAQLITHDQEILTEQQINQLNTLAKRREQGEPMAYLLGTREFYGREF 77 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 T+S PRPETE L+++AL R+ + V + DLGTG+G + ++ E Sbjct: 78 TVSPAVLIPRPETEHLLEAALL----RLPENGV--LWDLGTGSGILGISTKLERKDSLVF 131 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV------EGLFDVIVSNPPYIESVI 179 D+S AL++A+ NA G F Q WF + E DV+VSNPPYI++ Sbjct: 132 ASDLSADALQVAQQNAQHLGADVAF--AQGSWFDAARVFRLPENSVDVLVSNPPYIKNND 189 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 + ++R F+P+ +L DGL+H R + +L +G +E GYNQ V + ++F Sbjct: 190 LHLNQGDLR-FEPQTALTDFSDGLAHIRILIKNGKIYLKPNGWLLLEHGYNQAVAIRQLF 248 Query: 240 ESRKLFLVNAFKDYGGNDRV 259 ++ D G DR+ Sbjct: 249 TQHGYQMIETQPDLAGLDRI 268 >gi|239907763|ref|YP_002954504.1| protein methyltransferase hemK [Desulfovibrio magneticus RS-1] gi|239797629|dbj|BAH76618.1| protein methyltransferase hemK [Desulfovibrio magneticus RS-1] Length = 301 Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 71/225 (31%), Positives = 113/225 (50%), Gaps = 8/225 (3%) Query: 10 FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69 L + GL +I+ D L + + + R K E + ILG R+FY + ++ Sbjct: 48 LLSQALGLDRLGLILAMDRPLTPEELDLVRPLVARRGKGEPVAYILGEREFYGLDFAVTP 107 Query: 70 DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129 T PRPETEL++D +L ++ DLGTG+G + + L P G+ +D+ Sbjct: 108 ATLIPRPETELIIDRSLEL----FPAGELTSFADLGTGSGCLAVTLAVRFPGATGLALDL 163 Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWF---SSVEGLFDVIVSNPPYIESVIVDCLGLE 186 S +AL +A+ NAV + V++R ++D+ + EG + ++VSNPPY+ + E Sbjct: 164 SPEALAVARQNAVRHQVAQRLTFFEADFADLPAHGEG-YGLVVSNPPYVSAAEYRECSRE 222 Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231 VR+F+P +L G GL T+A L G VEIG+ Q Sbjct: 223 VREFEPSSALTPGETGLEAVPTVARAALSRLAPGGTLLVEIGWKQ 267 >gi|330823523|ref|YP_004386826.1| protein-(glutamine-N5) methyltransferase [Alicycliphilus denitrificans K601] gi|329308895|gb|AEB83310.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Alicycliphilus denitrificans K601] Length = 281 Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 75/216 (34%), Positives = 107/216 (49%), Gaps = 9/216 (4%) Query: 43 VRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRIL 102 R E + + G ++FY + L + + +PRP+TE+LVD AL P R + Sbjct: 63 ARRAAGEPVAYLTGSKEFYGLPLRVDARVLDPRPDTEILVDWALELLAPLPAPR----VA 118 Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162 DLGTG+GA+ LAL P + + VD S AL +A++NA G+ RF +Q+DW + + Sbjct: 119 DLGTGSGAIALALQHARPDARVLAVDASAGALAVARANAERLGLPVRF--VQADWLAGIA 176 Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL 222 G FD IVSNPPYI + L +P +L G DGL R IA L G Sbjct: 177 GPFDAIVSNPPYIPAQDPHLAALA---HEPLSALASGADGLDDIRAIAAQAPALLAPGGW 233 Query: 223 CSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258 +E G++Q V + + L V + D G R Sbjct: 234 LLLEHGWDQAGAVQALLRAAGLARVQSRDDLAGIAR 269 >gi|24379521|ref|NP_721476.1| putative protoporphyrinogen oxidase [Streptococcus mutans UA159] gi|290580478|ref|YP_003484870.1| putative protoporphyrinogen oxidase [Streptococcus mutans NN2025] gi|24377462|gb|AAN58782.1|AE014946_7 putative protoporphyrinogen oxidase [Streptococcus mutans UA159] gi|254997377|dbj|BAH87978.1| putative protoporphyrinogen oxidase [Streptococcus mutans NN2025] Length = 278 Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 76/216 (35%), Positives = 111/216 (51%), Gaps = 7/216 (3%) Query: 47 KHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGT 106 +H I G F ++ L++ PRPETE LV L + R ++LD+GT Sbjct: 65 QHIPAQYITGKAYFADLILSVDERVLIPRPETEELV----KLILKENQHRSSAKLLDIGT 120 Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFD 166 G+GA+ LAL K P ++ DIS AL +A+ NA N + F LQSD FS + +D Sbjct: 121 GSGAIALALAKAQPDWQVWASDISEDALNLAQENATVNQAAVTF--LQSDIFSHISDKYD 178 Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE 226 +IVSNPPYI D + V +P ++L DGL+ Y+ +A +L G +E Sbjct: 179 IIVSNPPYISLRDQDEVEQNVLAHEPHLALFADNDGLAFYQKLALEAEHYLKLTGKIYLE 238 Query: 227 IGYNQKVDVVRIFESR-KLFLVNAFKDYGGNDRVLL 261 IGY Q V ++FE + V +D G DR+++ Sbjct: 239 IGYKQGEAVSQLFERQFPNKRVRLLQDSFGKDRMVV 274 >gi|148241523|ref|YP_001226680.1| protoporphyrinogen oxidase [Synechococcus sp. RCC307] gi|147849833|emb|CAK27327.1| Protoporphyrinogen oxidase [Synechococcus sp. RCC307] Length = 294 Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 75/208 (36%), Positives = 104/208 (50%), Gaps = 13/208 (6%) Query: 57 WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV-RILDLGTGTGAVCLAL 115 WRDF L +S PR ETELLV+ A+ E D R DLGTG+G + +AL Sbjct: 85 WRDF---ELEVSPAVLIPRQETELLVELAMGC----FEASDAPQRWADLGTGSGCLAVAL 137 Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGV--SERFDTLQSDWFSSVE---GLFDVIVS 170 + P G VD S +AL +A+ NA G+ S + W+ ++ G D++VS Sbjct: 138 ARHWPSSCGWAVDCSREALAVARRNAAALGLLQSAALQWCEGLWWQPLQPLAGQLDLVVS 197 Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230 NPPYI S +VD L VRD +PR++LDGG DGL R I + + L G +E ++ Sbjct: 198 NPPYIPSAVVDGLEPVVRDHEPRLALDGGSDGLDALRLIIEAAPQMLAPGGWLVLEHHHD 257 Query: 231 QKVDVVRIFESRKLFLVNAFKDYGGNDR 258 Q V + + L +D G R Sbjct: 258 QAAAVAELLGAAGLQERRQERDLEGQMR 285 >gi|320529372|ref|ZP_08030460.1| protein-(glutamine-N5) methyltransferase [Selenomonas artemidis F0399] gi|320138338|gb|EFW30232.1| protein-(glutamine-N5) methyltransferase [Selenomonas artemidis F0399] Length = 295 Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 75/213 (35%), Positives = 116/213 (54%), Gaps = 5/213 (2%) Query: 54 ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPR-IEKRDVVRILDLGTGTGAVC 112 +LG R+F + ++ DT PRP+TE+LV SA+ F R + + I DLGTGTGA+ Sbjct: 79 VLGRREFMGLVFRVTRDTLVPRPDTEILVQSAVDFLCARHAAGAEDMCIADLGTGTGAIA 138 Query: 113 LALLKESPF--FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIV 169 L++L + VDIS A +A+ NA G++E+ + D + + G +D+I+ Sbjct: 139 LSVLHHADVAELHADAVDISPGAAAVARENAAQLGLAEKCTVHEGDLLAPLAGRSYDMIL 198 Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY 229 SNPPYI + + L +VR ++P ++LDGG DGL YR I L G ++E+G Sbjct: 199 SNPPYIPAADIAGLMTDVRTYEPHLALDGGADGLDFYRRIMADAPVMLKAGGAIAIEVGI 258 Query: 230 NQKVDVVRIFESR-KLFLVNAFKDYGGNDRVLL 261 Q DV + E ++ KD G +RV++ Sbjct: 259 GQAADVAALAEQHPRIVRTELKKDLAGVERVVI 291 >gi|56965631|ref|YP_177365.1| methylase, polypeptide chain release factor [Bacillus clausii KSM-K16] gi|56911877|dbj|BAD66404.1| methylase [Bacillus clausii KSM-K16] Length = 288 Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 80/214 (37%), Positives = 110/214 (51%), Gaps = 9/214 (4%) Query: 50 SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109 + +LG+ FY ++ D PRPETE LV L P + ILD+GTG+G Sbjct: 69 PVQHVLGYEQFYGRTFLVNGDVLIPRPETEELVALVLNKLKPGPQA-----ILDVGTGSG 123 Query: 110 AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVI 168 A+ L L E P DIS KAL++A+ NA G F + D + V G +FDVI Sbjct: 124 AIALTLKLERPDCHVTATDISEKALDVARENAQRLGADITF--AKGDLLAPVAGAVFDVI 181 Query: 169 VSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228 VSNPPYI D L + VR+F+P ++L DGL YR +A+ V ++ L +VEIG Sbjct: 182 VSNPPYIPYRDRDSLAVHVREFEPEMALFAEEDGLMFYRRLAEEVPACIHPRSLVAVEIG 241 Query: 229 YNQKVDVVRIFESRKLFL-VNAFKDYGGNDRVLL 261 Q V +F + F +N D G DR++ Sbjct: 242 AGQGEAVQALFAAAFPFADINIVYDINGKDRIVF 275 >gi|325141378|gb|EGC63860.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Neisseria meningitidis 961-5945] Length = 245 Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 78/195 (40%), Positives = 105/195 (53%), Gaps = 12/195 (6%) Query: 44 RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103 R L E + ILG R+FY R T++ PRPETE LV++ LA LP + R+ D Sbjct: 54 RRLNGEPVAYILGVREFYGRRFTVNPSVLIPRPETEHLVEAVLA-RLP-----ENGRVWD 107 Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS--- 160 LGTG+GAV + + E P DIS ALE A+ NA G R + WF + Sbjct: 108 LGTGSGAVAVTVALERPDAFVRASDISPPALETARKNAADLGA--RVEFAHGSWFDTDMP 165 Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220 EG +D+IVSNPPYIE+ ++R F+P+I+L DGLS RT+A G L + Sbjct: 166 SEGKWDIIVSNPPYIENGDKHLSQGDLR-FEPQIALTDFSDGLSCIRTLAQGAPDRLAEG 224 Query: 221 GLCSVEIGYNQKVDV 235 G +E G++Q V Sbjct: 225 GFLLLEHGFDQGAAV 239 >gi|188992911|ref|YP_001904921.1| Protein methyltransferase HemK [Xanthomonas campestris pv. campestris str. B100] gi|167734671|emb|CAP52881.1| Protein methyltransferase HemK [Xanthomonas campestris pv. campestris] Length = 283 Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 76/233 (32%), Positives = 116/233 (49%), Gaps = 11/233 (4%) Query: 31 DDRQRFFLTNAIV-RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFS 89 + QRF A+V R + E + + G R F+ + L +S+ T PR +TE LV+ + Sbjct: 52 EQAQRF---GALVERRHQGEPVAYLTGSRGFWTLDLAVSTATLIPRADTETLVE----LA 104 Query: 90 LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 L R+++ +R+ DLGTG+GA+ LA+ E P + + D S AL IA+ NA +G+ Sbjct: 105 LERLQQTASIRVADLGTGSGAIALAIASERPQAQLIATDASADALAIARHNAHAHGL-HN 163 Query: 150 FDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208 + W + G FD+I SNPPYI + ++R ++P +L G DGL R Sbjct: 164 VECRLGHWLQPLAGERFDLIASNPPYIAATDPHLQQGDLR-YEPASALASGSDGLDDIRL 222 Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 I HL G +E G++Q V + +R V +D DRV L Sbjct: 223 IVADAPAHLLPGGWLLLEHGWDQGEAVAALLTARGFAAVATHQDLEQRDRVTL 275 >gi|29655247|ref|NP_820939.1| peptide release factor-glutamine N5-methyltransferase [Coxiella burnetii RSA 493] gi|161830961|ref|YP_001596009.1| protein methyltransferase HemK [Coxiella burnetii RSA 331] gi|29542519|gb|AAO91453.1| peptide release factor-glutamine N5-methyltransferase [Coxiella burnetii RSA 493] gi|161762828|gb|ABX78470.1| protein methyltransferase HemK [Coxiella burnetii RSA 331] Length = 277 Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 78/240 (32%), Positives = 125/240 (52%), Gaps = 9/240 (3%) Query: 26 PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85 P+ L+ Q+ L+ + R LK E I ILG ++F+++ L ++ D PRPETE+LV+ Sbjct: 45 PEIQLNSSQQKTLSAYVKRRLKGEPIAYILGQKEFWSLNLKVTPDVLIPRPETEMLVEWI 104 Query: 86 LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145 L +LP+ EK +RI DLGTG+GAV LA+ E P + D S AL+IA+ NA + Sbjct: 105 LK-NLPKDEK---LRIADLGTGSGAVALAIAVERPHWTIDATDNSQAALKIAEINAKQHE 160 Query: 146 VSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204 + + + +W ++ + IV NPPYI L+ +PR +L G DGLS Sbjct: 161 I-KNCNFYHGEWCQALPRRDYHAIVGNPPYIPD---KDQHLQQLKHEPREALAAGSDGLS 216 Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 + I +L G +E GY+Q ++ + ++ + +D G R+++ R Sbjct: 217 AIKIIIHEAKSYLVNGGWLLLEHGYDQAEKIMTLMQADGYREITDRRDLAGLSRMMVARR 276 >gi|251782312|ref|YP_002996614.1| peptide release factor-glutamine N5-methyltransferase [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|242390941|dbj|BAH81400.1| peptide release factor-glutamine N5-methyltransferase [Streptococcus dysgalactiae subsp. equisimilis GGS_124] Length = 279 Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 78/220 (35%), Positives = 116/220 (52%), Gaps = 16/220 (7%) Query: 47 KHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLG 105 +H S + G F +++L++ PRPETE LVD LA E D + +LD+G Sbjct: 64 QHLSPQYLTGRAYFRDLQLSVDQRVLIPRPETEELVDLILA------ENPDTPLSVLDIG 117 Query: 106 TGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF 165 TG+GA+ ++L KE P ++ DIS L +A+ NA + F + SD FS + G F Sbjct: 118 TGSGAIAISLKKERPAWQLTASDISSDVLSLAQDNASHYQLDITF--IVSDVFSQLSGTF 175 Query: 166 DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225 D+IVSNPPYI D +GL V +P ++L DG + YR I + S +L++ G Sbjct: 176 DMIVSNPPYIAYEDKDEVGLNVYQSEPHLALFAAEDGYAIYRRIIEEASNYLSEKGKLYF 235 Query: 226 EIGYNQ----KVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 EIGY Q K V F ++ V +D G +R+++ Sbjct: 236 EIGYKQGEGIKALVNTHFPQKR---VRVLRDVFGKERMVV 272 >gi|225849652|ref|YP_002729886.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Persephonella marina EX-H1] gi|225646153|gb|ACO04339.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Persephonella marina EX-H1] Length = 280 Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 87/261 (33%), Positives = 126/261 (48%), Gaps = 9/261 (3%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L V L ++I + + + + + I R + E + I G + FY + Sbjct: 25 DTQILLSYVLKLPRWKLITEREEEIPKEKVMEFFSLIERRAQREPLAYITGEKAFYGLDF 84 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 + PRPETE+LVD L RI + V L++G G+G + ++LLK Sbjct: 85 KIKKGVLIPRPETEILVDEVLK----RIPEDKRVLGLEIGVGSGVISISLLKYRHNLFMY 140 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLG 184 GVDIS KALE+ + NA + VS R L+SD F V + FD IVSNPPY+ + + G Sbjct: 141 GVDISEKALELTRENAKIHRVSSRLKLLKSDLFKDVPHIKFDFIVSNPPYVSA--EEYAG 198 Query: 185 L-EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 L E +P +L GG G+ Y I +L + G EIGY Q V +I + Sbjct: 199 LEEEVKKEPVEALIGGKGGIEFYERIVKEGKIYLKEKGFFGFEIGYTQSDRVKKILQDEG 258 Query: 244 LFLVNAFKDYGGNDRVLLFCR 264 F V +KD DRV++ R Sbjct: 259 -FNVKVYKDLQDYDRVVIGER 278 >gi|297620932|ref|YP_003709069.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Waddlia chondrophila WSU 86-1044] gi|297376233|gb|ADI38063.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Waddlia chondrophila WSU 86-1044] Length = 283 Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 82/263 (31%), Positives = 126/263 (47%), Gaps = 9/263 (3%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 +++ + + G+ ++ + D L D + AI R +K E I G DF++ Sbjct: 24 KEAATIIGDALGMKPLELYMQHDRPLTDSELKRCREAIARRVKGEPNQYIRGIVDFFDCV 83 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV--RILDLGTGTGAVCLALLKESPFF 122 LT+ PR ETE+LVD + +E D+ + D+ TG+G + +A+ K+ P Sbjct: 84 LTVDKRVLIPRMETEILVDKIVK----ELENEDLKGKTLWDVCTGSGCIGIAIKKKFPEL 139 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181 + D+S ALE A NAV NGV R ++ D +G D IVSNPPYI Sbjct: 140 EVALSDLSADALEAASENAVKNGVDVRI--VKGDLLEPFKGERADFIVSNPPYIREEEFS 197 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 L +EV++F+P+++L G GL YR + + L G +EIG Q D+V+IF Sbjct: 198 TLAVEVKNFEPKMALVSGETGLEIYRRFNEELPGFLKAGGRIWMEIGMGQGEDIVKIFSG 257 Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264 V +D+ DR R Sbjct: 258 ENWENVWFEQDWSQLDRFFYATR 280 >gi|257899726|ref|ZP_05679379.1| modification methylase HemK [Enterococcus faecium Com15] gi|293571481|ref|ZP_06682508.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Enterococcus faecium E980] gi|257837638|gb|EEV62712.1| modification methylase HemK [Enterococcus faecium Com15] gi|291608486|gb|EFF37781.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Enterococcus faecium E980] Length = 279 Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 78/215 (36%), Positives = 117/215 (54%), Gaps = 21/215 (9%) Query: 54 ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVC 112 +LG+ DFY+ RL ++ T PRPETE LV+ L E DV + ++D+GTGTGA+ Sbjct: 74 LLGYADFYDHRLKVTEATLIPRPETEELVEWCLD------ETPDVPLEVIDIGTGTGAIA 127 Query: 113 LALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIV 169 ++L + VD+S +ALE+AK NA G F +TL+ + FDVI+ Sbjct: 128 ISLKAARKNWHVSAVDLSEEALEVAKENAQHEGTKISFYHGNTLEP----VQDRRFDVII 183 Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY 229 SNPPYI + + VR F+P+++L DGL+ Y IA L +G +EIG+ Sbjct: 184 SNPPYISRNEWELMDESVRSFEPKMALFAENDGLAVYEKIAVEAPSVLKPNGTIFLEIGF 243 Query: 230 NQKVDVVRIFES----RKLFLVNAFKDYGGNDRVL 260 Q V +IF+ +K+ + KD GN+R++ Sbjct: 244 RQGEAVKKIFQQAFPDKKVAIK---KDLFGNERMI 275 >gi|159028708|emb|CAO88180.1| hemK [Microcystis aeruginosa PCC 7806] Length = 294 Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 76/215 (35%), Positives = 111/215 (51%), Gaps = 17/215 (7%) Query: 57 WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116 WR+F L +S D PRPETELL+D + D +DLGTG+GA+ + L Sbjct: 89 WRNF---TLKVSPDVLIPRPETELLID----IVGETVRGDDGGIWVDLGTGSGAIAIGLA 141 Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPP 173 + +D S AL IAK N + G ++R Q W++ +E G +VSNPP Sbjct: 142 SILTKAEIYAIDYSPTALAIAKENIIKTGFADRIILKQGSWWTPLEKWKGQISGMVSNPP 201 Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233 YI S + L +EVR+ +PR++LDGG DGL+ R + +L GL VE+ Q Sbjct: 202 YIPSAEILDLQIEVREHEPRLALDGGEDGLTALRYLVATAPDYLRSGGLWLVEMRAGQGE 261 Query: 234 DVVRIFES----RKLFLVNAFKDYGGNDRVLLFCR 264 V ++ E+ R++ ++N D G DR +L R Sbjct: 262 KVAQMLENQGNYRQIQIIN---DLAGFDRFVLAER 293 >gi|28198634|ref|NP_778948.1| protoporphyrinogen oxidase [Xylella fastidiosa Temecula1] gi|182681318|ref|YP_001829478.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Xylella fastidiosa M23] gi|32129592|sp|Q87DF7|HEMK_XYLFT RecName: Full=Protein methyltransferase hemK homolog; AltName: Full=M.XfaHemK2P gi|28056718|gb|AAO28597.1| protoporphyrinogen oxidase [Xylella fastidiosa Temecula1] gi|182631428|gb|ACB92204.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Xylella fastidiosa M23] gi|307579768|gb|ADN63737.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Xylella fastidiosa subsp. fastidiosa GB514] Length = 275 Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 73/207 (35%), Positives = 109/207 (52%), Gaps = 7/207 (3%) Query: 54 ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113 ++G R F+ + + +SS T PR ETE LV+ AL R++ R+ DLGTG+GA+ L Sbjct: 67 LIGRRGFWTLDVIVSSATLIPRAETETLVEQALQ----RLDHASERRVADLGTGSGAIAL 122 Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNP 172 A+ E P + + D S AL+IA NA +G++ + +W+ ++ G FD+IVSNP Sbjct: 123 AIACERPQAQVLATDNSAAALDIAARNASAHGLNHVV-FREGNWYEALLGERFDLIVSNP 181 Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232 PYI ++R F+P +L G DGL R +A G HL G +E G++Q Sbjct: 182 PYIAVTDPHLTQGDLR-FEPPSALISGGDGLDALRILAAGAPAHLRPGGWLVLEHGWDQG 240 Query: 233 VDVVRIFESRKLFLVNAFKDYGGNDRV 259 V + + L V +D DRV Sbjct: 241 AAVRTLLHTAGLVAVATMQDLEARDRV 267 >gi|292490386|ref|YP_003525825.1| modification methylase, HemK family [Nitrosococcus halophilus Nc4] gi|291578981|gb|ADE13438.1| modification methylase, HemK family [Nitrosococcus halophilus Nc4] Length = 283 Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 81/239 (33%), Positives = 122/239 (51%), Gaps = 11/239 (4%) Query: 26 PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85 P+ L Q + R K E + I G ++F+++ L ++ T PRPETE LV+ Sbjct: 47 PEQELTSVQWSCFEQLLQRRAKGEPLAYIRGRQEFWSLDLRVTEATLIPRPETEQLVEE- 105 Query: 86 LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145 ++ R+ ++I DLGTG+GA+ LA+ E P + +G DIS AL +A+ N G Sbjct: 106 ---TIKRMALEQSLKIADLGTGSGAIALAIGSERPQAQVIGADISAVALAVARENGSRLG 162 Query: 146 VSERFDTLQSDWFSSVEG-LFDVIVSNPPYIES--VIVDCLGLEVRDFDPRISLDGGIDG 202 + E + DWF+ + G FD++VSNPPYI + GLE F+P +L G G Sbjct: 163 L-ENVTFRRGDWFAPLRGERFDLLVSNPPYIAEGDPHLTQGGLE---FEPDTALIAGDRG 218 Query: 203 LSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 L R IA G HL + G +E GY+Q ++ + + V F D G RV++ Sbjct: 219 LEAIRHIATGAREHLVEGGWLLLEHGYDQGPLLLELLTTLGYRQVVDFCDLAGVPRVVV 277 >gi|332296061|ref|YP_004437984.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Thermodesulfobium narugense DSM 14796] gi|332179164|gb|AEE14853.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Thermodesulfobium narugense DSM 14796] Length = 290 Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 79/226 (34%), Positives = 121/226 (53%), Gaps = 11/226 (4%) Query: 41 AIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR 100 AI LK++ + I+G++ F ++L ++ D PR ETE ++D F PR + Sbjct: 69 AIELRLKNKPLEYIIGYKPFRLLKLKVNEDVLIPRNETEEIIDIIKKF-FPRAK-----T 122 Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 LD+GTG+GA+ L+L++E V DIS +AL +AK NA N + + +D F Sbjct: 123 FLDIGTGSGAIALSLVREIENSFCVATDISERALMVAKENAKENNLENKVSFELADLFPL 182 Query: 161 VEGLFDVIVSNPPYIE--SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 + +FDVIVSNPPYI+ + + + E+ F+P+I+L GL Y I L Sbjct: 183 EKKMFDVIVSNPPYIDISNTKLSLISKEIY-FEPKIALFAENKGLYFYEKILSKAKDFLL 241 Query: 219 KDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 DG E+G+NQ +VV I E+ F + KD G +R ++ CR Sbjct: 242 FDGGLVFEVGFNQAKEVVEIGEANN-FSCFSLKDLYGVERFVV-CR 285 >gi|196229475|ref|ZP_03128340.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Chthoniobacter flavus Ellin428] gi|196226707|gb|EDY21212.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Chthoniobacter flavus Ellin428] Length = 275 Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 78/251 (31%), Positives = 119/251 (47%), Gaps = 10/251 (3%) Query: 10 FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69 L V G ++ ++ D L + + L + R E + +LG +F+ Sbjct: 30 LLAHVLGKKRMELYLEFDRPLSEPELEPLRALVKRRAAGEPLQHLLGTAEFHGRSFLCDK 89 Query: 70 DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129 PRPETE L + LA + R+LD+GTG+G + L L P + VD+ Sbjct: 90 RGLVPRPETEQLCELVLAGGAAK-------RVLDIGTGSGVIALTLATAWPEAQVEAVDL 142 Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRD 189 S AL +A+ NA ++ R L SD +SV G +D+IV+N PYI + L EVR Sbjct: 143 SPDALALARENAARLELAGRVQFLASDLLASVTGEYDLIVANLPYIARDEIATLTREVR- 201 Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249 DP +LDGG DGL +R ++HL G ++EIG++Q + + + + Sbjct: 202 HDPLSALDGGPDGLEVFRRFIPQAAQHLR--GRLALEIGHDQADPLTELLAAHNFQDIRP 259 Query: 250 FKDYGGNDRVL 260 DY G DR + Sbjct: 260 QTDYQGKDRFI 270 >gi|91070123|gb|ABE11047.1| putative protein methyltransferase [uncultured Prochlorococcus marinus clone ASNC729] Length = 289 Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 74/220 (33%), Positives = 110/220 (50%), Gaps = 9/220 (4%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101 ++RS + + I WRD ++L +++ PRPETEL+VD L + EK + Sbjct: 69 LLRSCPIQYLCGISFWRD---LKLKVTNKVLIPRPETELIVDIVLNIFRRKSEK---LFF 122 Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 +LGTG+GA+ +AL P GV DI ALEIA N + + +W+S + Sbjct: 123 AELGTGSGAISIALALAYPSSNGVATDIDQDALEIATKNFINSSKQSNLKFYCGNWWSPL 182 Query: 162 E---GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 E G D+ +SNPPYI + L EV++F+P+++L GG DGL H R I L Sbjct: 183 ENFKGKIDLAISNPPYIPKDTYEKLPKEVKNFEPKVALLGGDDGLEHIREIIQKAPLFLK 242 Query: 219 KDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258 + G +E ++Q V +I K + KD G R Sbjct: 243 EKGWLILENHFDQGEKVKKILIKNKFTSIEIVKDLTGIGR 282 >gi|149185459|ref|ZP_01863775.1| protein chain release factor methylase subunit [Erythrobacter sp. SD-21] gi|148830679|gb|EDL49114.1| protein chain release factor methylase subunit [Erythrobacter sp. SD-21] Length = 276 Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 78/227 (34%), Positives = 115/227 (50%), Gaps = 16/227 (7%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101 + R HE + ILG ++F+ ++ DT PR ++E+LV++AL +RD R+ Sbjct: 61 VQRRAAHEPVAHILGHQEFFGRSFKVTPDTLIPRGDSEVLVEAALEL------QRDAARV 114 Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER-----FDTLQSD 156 LDLGTGTGA+ L++L E+ +GVG D S AL +A NA GV R D + Sbjct: 115 LDLGTGTGALLLSVLAETQ-AQGVGTDRSPAALAVAHDNADLLGVEHRVRFHLLDWTEDG 173 Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216 W + + G FD+IV NPPY+E L +V +P +L G +GL YR I + Sbjct: 174 WAADL-GQFDLIVCNPPYVEDEA--DLDPDVCGHEPHGALFAGPEGLDDYRIILPQLRSL 230 Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFC 263 ++ +EIG+ Q V I + F V +D G R L+ Sbjct: 231 MSVSAAAILEIGHEQSPAVSEIARAVG-FAVELRRDLAGRPRALILT 276 >gi|160876840|ref|YP_001556156.1| HemK family modification methylase [Shewanella baltica OS195] gi|217974699|ref|YP_002359450.1| HemK family modification methylase [Shewanella baltica OS223] gi|304410656|ref|ZP_07392274.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Shewanella baltica OS183] gi|307304753|ref|ZP_07584503.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Shewanella baltica BA175] gi|160862362|gb|ABX50896.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Shewanella baltica OS195] gi|217499834|gb|ACK48027.1| modification methylase, HemK family [Shewanella baltica OS223] gi|304351140|gb|EFM15540.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Shewanella baltica OS183] gi|306912155|gb|EFN42579.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Shewanella baltica BA175] gi|315269043|gb|ADT95896.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Shewanella baltica OS678] Length = 282 Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 78/237 (32%), Positives = 120/237 (50%), Gaps = 8/237 (3%) Query: 26 PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85 P+ L Q + + K + I+G R+F+++ ++ T PRP+TE+LV++A Sbjct: 48 PEKSLTVEQWKRFQQMVQKRQKGVPVAHIVGEREFWSLPFIVNDTTLIPRPDTEILVETA 107 Query: 86 LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145 L L K +LDLGTGTGA+ LAL E ++ VD A+ +A +N N Sbjct: 108 LNMPLSTYAK-----VLDLGTGTGAIALALASERESWQITAVDKVDDAVALAIANR-ENL 161 Query: 146 VSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204 + D LQSDWFS+V+ FD+IVSNPPYI+ +VR F+P+ +L +G + Sbjct: 162 KLPQVDILQSDWFSAVKSRDFDLIVSNPPYIDETDEHLHQGDVR-FEPQSALTAAEEGFA 220 Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 IA+ +L +G +E G+ Q V + V +D+G NDR + Sbjct: 221 DLYYIANTARDYLKPNGYILLEHGFEQAVRLRAKLIELGYENVATVRDFGSNDRCTM 277 >gi|153002120|ref|YP_001367801.1| HemK family modification methylase [Shewanella baltica OS185] gi|151366738|gb|ABS09738.1| modification methylase, HemK family [Shewanella baltica OS185] Length = 282 Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 78/237 (32%), Positives = 120/237 (50%), Gaps = 8/237 (3%) Query: 26 PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85 P+ L Q + + K + I+G R+F+++ ++ T PRP+TE+LV++A Sbjct: 48 PEKSLTVEQWKRFQQMVQKRQKGVPVAHIVGEREFWSLPFIVNDTTLIPRPDTEILVETA 107 Query: 86 LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145 L L K +LDLGTGTGA+ LAL E ++ VD A+ +A +N N Sbjct: 108 LNLPLSTYAK-----VLDLGTGTGAIALALASERESWQITAVDKVDDAVALAIANR-ENL 161 Query: 146 VSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204 + D LQSDWFS+V+ FD+IVSNPPYI+ +VR F+P+ +L +G + Sbjct: 162 KLPQVDILQSDWFSAVKSRDFDLIVSNPPYIDETDEHLHQGDVR-FEPQSALTAAEEGFA 220 Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 IA+ +L +G +E G+ Q V + V +D+G NDR + Sbjct: 221 DLYYIANTARDYLKPNGYILLEHGFEQAVRLRAKLIELGYENVATVRDFGSNDRCTM 277 >gi|227552472|ref|ZP_03982521.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Enterococcus faecium TX1330] gi|257888290|ref|ZP_05667943.1| modification methylase HemK [Enterococcus faecium 1,141,733] gi|257896820|ref|ZP_05676473.1| modification methylase HemK [Enterococcus faecium Com12] gi|293378551|ref|ZP_06624714.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Enterococcus faecium PC4.1] gi|227178384|gb|EEI59356.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Enterococcus faecium TX1330] gi|257824344|gb|EEV51276.1| modification methylase HemK [Enterococcus faecium 1,141,733] gi|257833385|gb|EEV59806.1| modification methylase HemK [Enterococcus faecium Com12] gi|292642880|gb|EFF61027.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Enterococcus faecium PC4.1] Length = 279 Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 78/215 (36%), Positives = 117/215 (54%), Gaps = 21/215 (9%) Query: 54 ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVC 112 +LG+ DFY+ RL ++ T PRPETE LV+ L E DV + ++D+GTGTGA+ Sbjct: 74 LLGYADFYDHRLKVTEATLIPRPETEELVEWCLD------ETPDVPLEVIDIGTGTGAIA 127 Query: 113 LALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIV 169 ++L + VD+S +ALE+AK NA G F +TL+ + FDVI+ Sbjct: 128 ISLKAARKNWHVSAVDLSEEALEVAKENAQHEGTKISFYHGNTLEP----VQDRRFDVII 183 Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY 229 SNPPYI + + VR F+P+++L DGL+ Y IA L +G +EIG+ Sbjct: 184 SNPPYISRNEWELMDESVRSFEPKMALFAENDGLAVYEKIAVEAPSVLKPNGKIFLEIGF 243 Query: 230 NQKVDVVRIFES----RKLFLVNAFKDYGGNDRVL 260 Q V +IF+ +K+ + KD GN+R++ Sbjct: 244 RQGEAVKKIFQQAFPDKKVAIK---KDLFGNERMI 275 >gi|167740376|ref|ZP_02413150.1| protein methyltransferase HemK [Burkholderia pseudomallei 14] Length = 284 Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 86/263 (32%), Positives = 131/263 (49%), Gaps = 18/263 (6%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDD-RQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 D+ L G S Q+I D LD R R+ A R E I ++ G R+F+ + Sbjct: 24 DARILLAHALGWSRTQLITRADEPLDAARARYLALQA--RRAAGEPIAQLTGAREFFGLE 81 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 ++ D PRPETELLV++AL I+ +LDLGTG+GA+ +++ E P + Sbjct: 82 FDITPDVLIPRPETELLVETALDA----IDGIASPCVLDLGTGSGAIAVSIASERPDARV 137 Query: 125 VGVDISCKALEIAKSNA------VTNGVSERFDTLQSDWFSSVE-GL-FDVIVSNPPYIE 176 ++ S AL++A+ NA G RF L+SDW+++++ GL F V+VSNPPYI Sbjct: 138 WALERSVAALDVARRNARKLLDPARAGGPLRF--LESDWYAALDPGLRFHVVVSNPPYIA 195 Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236 ++R F+PR +L DGL+ RTI G + G +E GY+Q V Sbjct: 196 RHDPHLAEGDLR-FEPRGALTDENDGLAAIRTIVAGAHAFVAPGGALWLEHGYDQAAAVR 254 Query: 237 RIFESRKLFLVNAFKDYGGNDRV 259 + ++ V + D +R Sbjct: 255 ALLDAAGFADVESRADLASIERA 277 >gi|325981710|ref|YP_004294112.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Nitrosomonas sp. AL212] gi|325531229|gb|ADZ25950.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Nitrosomonas sp. AL212] Length = 278 Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 69/241 (28%), Positives = 127/241 (52%), Gaps = 11/241 (4%) Query: 22 VIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELL 81 ++ PD L +Q ++ + + ++ + ++G R F+++ ++ PRPETELL Sbjct: 37 LLTHPDQALPGQQFEKFSSLVQQRIEGLPVAYLIGKRAFFDLTFKVTEAVLIPRPETELL 96 Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 V+ AL I + ++LDLGTG+GA+ +++ K P + + VD+S A+++ +SN Sbjct: 97 VEWALEL----IPSQKFCKVLDLGTGSGAIGISIAKHRPQSQVIAVDLSPAAIDVCQSNV 152 Query: 142 VTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRD--FDPRISLDG 198 V+ + ++ +WF + G FD+IVSNPPY+ D L+ D F+P ++L Sbjct: 153 EILEVA-NLNVIRGNWFDELSGEKFDLIVSNPPYVAE---DDPHLQQGDLRFEPEMALSA 208 Query: 199 GIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258 G G++ I + +L K+G +E GYNQ ++ ++ + ++ D G R Sbjct: 209 GEHGMACITHIINAAPGYLGKEGWLLLEHGYNQAEACRQLLRNKDFSNICSYPDLAGIMR 268 Query: 259 V 259 V Sbjct: 269 V 269 >gi|110597726|ref|ZP_01386010.1| modification methylase, HemK family [Chlorobium ferrooxidans DSM 13031] gi|110340633|gb|EAT59113.1| modification methylase, HemK family [Chlorobium ferrooxidans DSM 13031] Length = 297 Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 80/238 (33%), Positives = 117/238 (49%), Gaps = 12/238 (5%) Query: 31 DDRQRFFLTNAIVRS-LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL-AF 88 D+ RF A+ R L+ + ILG + FY + ++ PRPETELLV+ AL + Sbjct: 58 DELDRF---RALCRQRLEGRPVQYILGEQCFYGLEYSVDERVLIPRPETELLVEQALESL 114 Query: 89 SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148 ILD+GTG+G + + + K P VD S AL +A+ NA +GV Sbjct: 115 GYSSRGGPGEANILDIGTGSGCIAVTMAKLCPALTATAVDCSLDALAVARRNAGRHGVES 174 Query: 149 RFDTLQSDW----FSS--VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202 R + +D FS G F +I+SNPPYI D L EVRD++P+++L +G Sbjct: 175 RISFVTADMLDDHFSEKISTGPFTLILSNPPYIPEGEWDSLQKEVRDYEPKLALTTP-NG 233 Query: 203 LSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 YR++A ++ L G E+ + V V I +S + KDY G DRV+ Sbjct: 234 FECYRSVAGQAAKLLTAGGKLFFELHADGAVLVSEIMKSHGFSALTVTKDYSGLDRVI 291 >gi|326803666|ref|YP_004321484.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Aerococcus urinae ACS-120-V-Col10a] gi|326650377|gb|AEA00560.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Aerococcus urinae ACS-120-V-Col10a] Length = 239 Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 71/210 (33%), Positives = 115/210 (54%), Gaps = 7/210 (3%) Query: 54 ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLP-RIEKRDVVRILDLGTGTGAVC 112 +LG FY R +++ T PR +TE L+D ++EK+ +LDLGTG+GA+ Sbjct: 26 LLGEAWFYGYRFRVNAATLIPRFDTERLIDCVHTLRKSGQLEKQ--ADVLDLGTGSGAIA 83 Query: 113 LALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSN 171 + L KE P K VDIS AL +AK NA + V+ + ++ D +V + FD+I+SN Sbjct: 84 VTLAKELPDLKLTAVDISSDALAVAKENAYFHQVT--IEWIKGDMLDAVAQRKFDLIISN 141 Query: 172 PPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231 PPYI + +G +V ++P+++L DG +Y+ A + + DG +E G +Q Sbjct: 142 PPYISENEIGEMGEDVLMYEPKLALFAKDDGYYYYKQFARRIQSFMKADGTLLMECGSHQ 201 Query: 232 KVDVVRIF-ESRKLFLVNAFKDYGGNDRVL 260 ++ +F +S V + KDY G DR++ Sbjct: 202 AAKIISLFKKSNPKAEVKSIKDYNGIDRII 231 >gi|116749149|ref|YP_845836.1| HemK family modification methylase [Syntrophobacter fumaroxidans MPOB] gi|116698213|gb|ABK17401.1| modification methylase, HemK family [Syntrophobacter fumaroxidans MPOB] Length = 288 Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 85/266 (31%), Positives = 125/266 (46%), Gaps = 9/266 (3%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 Q ++ L V Q+ + D L + AI R E I G ++F+ Sbjct: 26 QPRANAEVLLAHVLDTERIQLYLRYDQPLGSAELARYREAIRRRASCEPTQYITGRQEFW 85 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 ++ L + PRPETE+LV+ AL LP R+LD+GTG+GA+ ++L E Sbjct: 86 SLELEVGPAVLIPRPETEVLVEKALEL-LPGTR----ARVLDIGTGSGAIAVSLATERKD 140 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS---VEGLFDVIVSNPPYIESV 178 V D S ALEIA+ NAV + V +R D FS+ +FD+IV+NPPYI Sbjct: 141 LTVVATDRSPGALEIARRNAVRHKVEDRVWLAAMDLFSAFLPAVPVFDLIVANPPYIGDF 200 Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238 L E+ + +P +L GG+DGL R I L G +EIG Q + + Sbjct: 201 EFAALPREIAEHEPVEALRGGVDGLDVIRKILAEAPFFLKPGGSLLIEIGKGQDEMLPLV 260 Query: 239 FESRKLFLVNAFKDYGGNDRVLLFCR 264 ++ ++ +DY G RV + CR Sbjct: 261 PDNSRIDTCGFIRDYSGVLRV-MHCR 285 >gi|172038587|ref|YP_001805088.1| protoporphyrinogen oxidase [Cyanothece sp. ATCC 51142] gi|171700041|gb|ACB53022.1| protoporphyrinogen oxidase [Cyanothece sp. ATCC 51142] Length = 303 Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 74/213 (34%), Positives = 104/213 (48%), Gaps = 8/213 (3%) Query: 57 WRDFYNVRLTLSSDTFEPRPETELLVDSAL-AFSLPRIEKRDVVRILDLGTGTGAVCLAL 115 WR F L +S D PRPETEL++D AL A R +DLGTG+GA+ L L Sbjct: 93 WRRF---SLKVSPDVLIPRPETELIIDFALKAVQHSRNPYLSSGHWVDLGTGSGAIALGL 149 Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNP 172 P VD S +AL IA+ NA+ G S + Q W++ +E G +VSNP Sbjct: 150 ADSFPQATIHAVDTSIQALTIAQENAIKEGFSSQIHFYQGSWWTPLEHLQGQVSAMVSNP 209 Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232 PYI + ++ L EV+ +P ++LDGG DGL + D +L G+ VE+ Q Sbjct: 210 PYIPTSLLSQLEPEVKKHEPILALDGGNDGLEAINYLIDTAPNYLISGGIFLVEMMAGQG 269 Query: 233 VDVVRIFESRKLF-LVNAFKDYGGNDRVLLFCR 264 V ++ E+ + + D G R L R Sbjct: 270 EKVKQLLEASYHYQAIEILPDLAGVGRFALAYR 302 >gi|254523856|ref|ZP_05135911.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Stenotrophomonas sp. SKA14] gi|219721447|gb|EED39972.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Stenotrophomonas sp. SKA14] Length = 285 Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 80/227 (35%), Positives = 117/227 (51%), Gaps = 11/227 (4%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101 + R + E + + G R F+ + L + T PRPETELLV+ +L R+ +++ Sbjct: 64 LARRVAGEPVAYLTGRRGFWTLDLEVDPATLIPRPETELLVE----LALDRLPLDRALQL 119 Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSS 160 DLGTG+GA+ LAL E P + + D S AL +A NA + + RF DW++ Sbjct: 120 ADLGTGSGAIALALASERPQAQVLATDASPGALAVAARNAARHELHNVRFAEGGHDWYAP 179 Query: 161 VEGL-FDVIVSNPPYIESVIVDCLGLEVRD--FDPRISLDGGIDGLSHYRTIADGVSRHL 217 ++G FD+I SNPPYI S D L+ D F+P +L G+DGL R I DG HL Sbjct: 180 LQGARFDLIASNPPYIAS---DDPHLQQGDLRFEPATALASGVDGLDDIRRIVDGGQAHL 236 Query: 218 NKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 G +E G+ Q + +FE+ + V +D DR+ L R Sbjct: 237 LPGGWLLIEHGWGQGEAIRALFEAARFADVQTVQDLEQRDRITLGRR 283 >gi|325267515|ref|ZP_08134168.1| protein methyltransferase HemK [Kingella denitrificans ATCC 33394] gi|324981040|gb|EGC16699.1| protein methyltransferase HemK [Kingella denitrificans ATCC 33394] Length = 311 Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 82/255 (32%), Positives = 117/255 (45%), Gaps = 12/255 (4%) Query: 10 FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69 L +TGLS Q+I +L Q R + E + +LG R+FY ++ Sbjct: 63 LLQHITGLSHSQLITRDGDLLPPEQEAQWRQLCRRREQGEPVAYLLGSREFYGRTFAVNR 122 Query: 70 DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129 PRPETE L+++AL R+ + D+GTG+G + ++ E P DI Sbjct: 123 HVLIPRPETEHLLEAALC----RLPAGGA--LWDMGTGSGIIAVSAKLERPDADVFASDI 176 Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG---LFDVIVSNPPYIESVIVDCLGLE 186 S AL +A+ NA T + F Q WF + + +DVIVSNPPYI + + Sbjct: 177 SADALAVAQYNAQTLKAACTF--AQGSWFEAQKQPARQWDVIVSNPPYIRADDPHLAQGD 234 Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246 +R F+P +L DGL H R I +HL G +E GY+Q D+ R+F Sbjct: 235 LR-FEPEGALTDFADGLQHIRHIVAQAPQHLKTGGYLLLEHGYDQAADIRRLFAQHGYRH 293 Query: 247 VNAFKDYGGNDRVLL 261 D G DRV L Sbjct: 294 CETLLDLAGLDRVTL 308 >gi|301629495|ref|XP_002943875.1| PREDICTED: protein methyltransferase hemK homolog [Xenopus (Silurana) tropicalis] Length = 269 Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 73/215 (33%), Positives = 105/215 (48%), Gaps = 9/215 (4%) Query: 44 RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103 R E + + G + FY + L + + +PRP+TE LVD AL P + RI D Sbjct: 39 RRAAGEPVAYLTGRKAFYGLPLAVDARVLDPRPDTETLVDWALELLAPHVAP----RIAD 94 Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG 163 LGTG+GA+ LAL + + + VD S AL +A++NA+ G+ RF ++ W V G Sbjct: 95 LGTGSGAIALALQSQRADAQVLAVDASAGALAVARANAMRLGLPVRF--VRCHWLDGVAG 152 Query: 164 LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223 FD IV+NPPYI + D L +P +L G DGL RTI+ L G Sbjct: 153 PFDAIVANPPYIRA---DDPHLAALRHEPLSALVSGADGLDDIRTISAQAPMRLAPGGWL 209 Query: 224 SVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258 +E G++Q V + + V + D G R Sbjct: 210 LLEHGWDQADAVQALLRAAGFAAVASRHDLAGIAR 244 >gi|75907706|ref|YP_322002.1| modification methylase HemK [Anabaena variabilis ATCC 29413] gi|75701431|gb|ABA21107.1| Modification methylase HemK [Anabaena variabilis ATCC 29413] Length = 308 Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 73/194 (37%), Positives = 104/194 (53%), Gaps = 14/194 (7%) Query: 46 LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAF-----SLPRIEKRDVVR 100 L + I + WR+F RLT+SS PRPETE L+D A+A S ++++ V Sbjct: 82 LPVQYIAGVTPWRNF---RLTVSSAVLIPRPETECLIDLAVAAVANSESALQLQQGHWV- 137 Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 DLGTG+GA+ L L P VD S +AL IA+ NA G+ +R Q W+ Sbjct: 138 --DLGTGSGAIALGLADAFPEATIHAVDCSLEALAIAQQNAQNTGLVDRMRFYQGRWWEP 195 Query: 161 ---VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217 ++G F +VSNPPYI S IV L EV + +P ++LDGG DGL R + + +L Sbjct: 196 LTLLKGQFSGMVSNPPYIPSDIVPTLQPEVVNHEPHLALDGGADGLDAIRHLIEVAPSYL 255 Query: 218 NKDGLCSVEIGYNQ 231 +G+ +E+ Q Sbjct: 256 RPEGIWLIEMMAGQ 269 >gi|303232598|ref|ZP_07319284.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Atopobium vaginae PB189-T1-4] gi|302481385|gb|EFL44459.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Atopobium vaginae PB189-T1-4] Length = 546 Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 77/261 (29%), Positives = 125/261 (47%), Gaps = 7/261 (2%) Query: 7 SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66 S +C T L+ ++ ++ D VL + + + + + + + I G F ++ L Sbjct: 51 SQWLICAATKLTRVELFLNFDRVLTNDELACMHKLVAARAEGKPLQYITGEMAFRHIVLR 110 Query: 67 LSSDTFEPRPETELLVDSAL-AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 PRPETE+LV+ AL ++ V IL++GTG+G + L++ E Sbjct: 111 CEEQVLIPRPETEMLVEYALNKLTILHTAPHTPV-ILEIGTGSGCIALSIASELEHSHVT 169 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV----EGLFDVIVSNPPYIESVIVD 181 D S A +A+ NA G+ D +++ + V +G D ++SNPPYI S IVD Sbjct: 170 ATDSSPFACSLAQRNAHALGLDSAVDIIETSYADGVSPQLKGNVDALISNPPYIPSAIVD 229 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 L EVRDF+P +LDGG DGL +R + + V ++ G VE+ + ++ Sbjct: 230 TLTSEVRDFEPHAALDGGTDGLRVFRGLLELVPTYVRPGGFFCVELFEDNVQTAAQLCRQ 289 Query: 242 RKLF-LVNAFKDYGGNDRVLL 261 LF V KD G R ++ Sbjct: 290 SNLFSTVEVTKDLAGRSRFII 310 >gi|134301000|ref|YP_001114496.1| HemK family modification methylase [Desulfotomaculum reducens MI-1] gi|134053700|gb|ABO51671.1| [protein release factor]-glutamine N5-methyltransferase [Desulfotomaculum reducens MI-1] Length = 289 Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 73/265 (27%), Positives = 130/265 (49%), Gaps = 17/265 (6%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L +VTG+ + + + L +Q+ + R + E + ++G ++F Sbjct: 25 DAQVLLSQVTGIDRTGLFMRQEQPLTPQQQEKYQILLERRAQGEPVAYLIGRKEFMGRDF 84 Query: 66 TLSSDTFEPRPETELLVDSALAF-----SLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120 ++ D PRP+TEL+V++A+ F S P + +D+GTG+GA+ ++L Sbjct: 85 VVTPDVLIPRPDTELMVETAVKFFHKNSSCPPV-------AVDVGTGSGAIAVSLASLVQ 137 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF----DVIVSNPPYIE 176 + +D+S AL++A+ NA G+ ER Q + + +I +N PY+ Sbjct: 138 ELQVYAIDLSEAALKVARQNAERLGMKERVHFQQGNLLEPLLKTMGEEVSIITANLPYVP 197 Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236 S + L +V++F+P ++LDGG DGL YR + R L GL +EIG Q Sbjct: 198 SGDIPTLMRDVKEFEPHLALDGGPDGLDLYRLLIPQAYRLLQPGGLLLMEIGPGQGTGAK 257 Query: 237 RIFESRKLFLVNAFKDYGGNDRVLL 261 +I + + + KD G +R++L Sbjct: 258 KILPAGQ-WQGTVLKDLAGRERLVL 281 >gi|53717071|ref|YP_105274.1| hemK protein [Burkholderia mallei ATCC 23344] gi|67639916|ref|ZP_00438744.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Burkholderia mallei GB8 horse 4] gi|121597316|ref|YP_990283.1| methyltransferase, HemK family protein [Burkholderia mallei SAVP1] gi|124381896|ref|YP_001024782.1| methyltransferase, HemK family protein [Burkholderia mallei NCTC 10229] gi|126446694|ref|YP_001079121.1| protein hemK [Burkholderia mallei NCTC 10247] gi|167003350|ref|ZP_02269136.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Burkholderia mallei PRL-20] gi|254175844|ref|ZP_04882503.1| protein hemK [Burkholderia mallei ATCC 10399] gi|254203238|ref|ZP_04909600.1| hemK protein [Burkholderia mallei FMH] gi|254208573|ref|ZP_04914922.1| putative protein HemK [Burkholderia mallei JHU] gi|254355791|ref|ZP_04972070.1| protein hemK [Burkholderia mallei 2002721280] gi|52423041|gb|AAU46611.1| hemK protein [Burkholderia mallei ATCC 23344] gi|121225114|gb|ABM48645.1| methyltransferase, HemK family protein [Burkholderia mallei SAVP1] gi|124289916|gb|ABM99185.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Burkholderia mallei NCTC 10229] gi|126239548|gb|ABO02660.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Burkholderia mallei NCTC 10247] gi|147746283|gb|EDK53361.1| hemK protein [Burkholderia mallei FMH] gi|147751260|gb|EDK58328.1| putative protein HemK [Burkholderia mallei JHU] gi|148024762|gb|EDK82945.1| protein hemK [Burkholderia mallei 2002721280] gi|160696887|gb|EDP86857.1| protein hemK [Burkholderia mallei ATCC 10399] gi|238520528|gb|EEP83987.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Burkholderia mallei GB8 horse 4] gi|243061103|gb|EES43289.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Burkholderia mallei PRL-20] Length = 285 Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 84/262 (32%), Positives = 129/262 (49%), Gaps = 15/262 (5%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L G S Q+I D LD R R E I ++ G R+F+ ++ Sbjct: 24 DARILLAHALGWSRTQLITRADEPLDAAARARYLALQARRAAGEPIAQLTGAREFFGLKF 83 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 ++ D PRPETELLV++AL I+ +LDLGTG+GA+ +++ E P + Sbjct: 84 DITPDVLIPRPETELLVETALDA----IDGIASPCVLDLGTGSGAIAVSIASERPDARVW 139 Query: 126 GVDISCKALEIAKSNA------VTNGVSERFDTLQSDWFSSVE-GL-FDVIVSNPPYIES 177 ++ S AL++A+ NA G RF L+SDW+++++ GL F V+VSNPPYI Sbjct: 140 ALERSVAALDVARRNARKLLDPARAGGPLRF--LESDWYAALDPGLRFHVVVSNPPYIAR 197 Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237 ++R F+PR +L DGL+ RTI G + G +E GY+Q V Sbjct: 198 HDPHLAEGDLR-FEPRGALTDENDGLAAIRTIVAGAHAFVAPGGALWLEHGYDQAAAVRA 256 Query: 238 IFESRKLFLVNAFKDYGGNDRV 259 + ++ V + D +R Sbjct: 257 LLDAAGFADVESRADLASIERA 278 >gi|81300672|ref|YP_400880.1| HemK family modification methylase [Synechococcus elongatus PCC 7942] gi|81169553|gb|ABB57893.1| modification methylase, HemK family [Synechococcus elongatus PCC 7942] Length = 293 Score = 112 bits (280), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 73/206 (35%), Positives = 103/206 (50%), Gaps = 8/206 (3%) Query: 57 WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116 WRD L +S PRPETEL++D A+A+S R DLGTG+GA+ +AL Sbjct: 84 WRDL---ELQVSPAVLIPRPETELIIDLAIAWSQAE-PARQTGFWADLGTGSGAIAIALA 139 Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW---FSSVEGLFDVIVSNPP 173 + P + VD+S +AL IA++NA G+S+R Q W + G I+SNPP Sbjct: 140 RALPQITVLAVDVSAEALAIARNNAARYGLSDRIRWYQGSWLVPLADYRGQLQAIISNPP 199 Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233 YI + L EVRD +PR +L+ G DGL R +A +L GL E Q Sbjct: 200 YIPTQEWQALEPEVRDHEPRQALESGPDGLEALRHLAQAAPDYLRSLGLWLCEHMAGQST 259 Query: 234 DVVRIFESRKLFL-VNAFKDYGGNDR 258 V + + + + + +D G DR Sbjct: 260 AVTALLAAIPGYSEIQSHRDLAGRDR 285 >gi|146328946|ref|YP_001209003.1| HemK family modification methylase [Dichelobacter nodosus VCS1703A] gi|146232416|gb|ABQ13394.1| modification methylase, HemK family [Dichelobacter nodosus VCS1703A] Length = 276 Score = 112 bits (280), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 75/225 (33%), Positives = 120/225 (53%), Gaps = 12/225 (5%) Query: 38 LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97 L ++R + E ILG + FY++ L +S PRPETE LVD+ALA +I +D Sbjct: 54 LNALLLRRARGEPFAYILGNQPFYHLDLKVSPAVLIPRPETEQLVDAALA----KIPPQD 109 Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 R++DLGTG+GA+ LA+ E P + + VD S AL +A+ NA ++ L SDW Sbjct: 110 CYRVIDLGTGSGAIALAIAAERPHCRVLAVDKSWDALRVAQENARHLQLANVHFVL-SDW 168 Query: 158 FSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216 +++ + D+IVSNPPYI++ L ++P+++L G + + R Sbjct: 169 LTAIADARADMIVSNPPYIDAHDEHLAALA---YEPQMALVSPEHGYADLLHLIAHAGRC 225 Query: 217 LNKDGLCSVEIGYNQKVDVVRIF--ESRKLFLVNAFKDYGGNDRV 259 L +G +E G NQ+ +R F E +++ +DY G +R+ Sbjct: 226 LRPNGWLLLEHG-NQQAQKLRAFAAEQSGWQHIHSLRDYAGWERI 269 >gi|304415272|ref|ZP_07395968.1| N5-glutamine methyltransferase [Candidatus Regiella insecticola LSR1] gi|304282878|gb|EFL91345.1| N5-glutamine methyltransferase [Candidatus Regiella insecticola LSR1] Length = 273 Score = 112 bits (280), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 85/245 (34%), Positives = 128/245 (52%), Gaps = 28/245 (11%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 RD+ L VTG + ++ ++ L Q F L + R + E I ++G R+F+++ Sbjct: 23 RDAEILLSFVTGRARTFLLAFSETELTGEQLFKLAPLVERRQQGEPIAYLVGEREFWSLP 82 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 LT+SS + PRP+TE LV+ AL LP D RILDLG+G+GA+ LAL E P Sbjct: 83 LTVSSASLIPRPDTESLVEQALV-CLP----ADACRILDLGSGSGAIALALASERPDCLV 137 Query: 125 VGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDW---------------FSSVEGLFDVI 168 +G+DI+ A+ +A+ NA+ ++ RF +Q +W FSS+ F +I Sbjct: 138 IGIDINADAVTLARHNALKLAINNLRF--VQGNWFNINAFTKQGVERDHFSSLMAGFRLI 195 Query: 169 VSNPPYIESVIVDCLGLEVRD--FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE 226 VSNPPYI S D L++ D ++P +L G DG+ I +L +G VE Sbjct: 196 VSNPPYIAS---DDPHLKMGDVRYEPVEALVAGDDGMDDLVIIVRQAPAYLLSEGWLLVE 252 Query: 227 IGYNQ 231 G+ Q Sbjct: 253 HGWQQ 257 >gi|300702901|ref|YP_003744502.1| n5-glutamine methyltransferase, modifies release factors rf-1 and rf-2 [Ralstonia solanacearum CFBP2957] gi|299070563|emb|CBJ41858.1| N5-glutamine methyltransferase, modifies release factors RF-1 and RF-2 [Ralstonia solanacearum CFBP2957] Length = 281 Score = 112 bits (280), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 90/260 (34%), Positives = 122/260 (46%), Gaps = 15/260 (5%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 ++ + VTGLS Q+I +D+ R L R L E + +LG R+F+ Sbjct: 17 EARMLVSHVTGLSRVQLITQDTYAIDNGVRTRLAELATRRLAGEPMAYLLGEREFFGRLF 76 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG--AVCLALLKESPFFK 123 ++ PRP+TELLV+ A L RIE RD +LDLGTG+G AV +AL + + Sbjct: 77 QVTPAVLIPRPDTELLVEQA----LDRIEDRDAPDVLDLGTGSGIIAVTIALARRD--AR 130 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF-----SSVEGLFDVIVSNPPYIESV 178 D S AL +A NA G + DW+ S FD+IVSNPPYI S Sbjct: 131 VWATDASADALAVAAGNAQALGAAN-VHVAHGDWYGALPESDAPPAFDLIVSNPPYIASA 189 Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238 ++R F+P +L DGL H RTI G L DG +E GY+Q V + Sbjct: 190 DAHLGQGDLR-FEPAGALTDHGDGLRHLRTIVAGAPARLAADGWLLLEHGYDQGPAVRAL 248 Query: 239 FESRKLFLVNAFKDYGGNDR 258 V +D G+DR Sbjct: 249 LAEAGFADVFTARDLAGHDR 268 >gi|302380151|ref|ZP_07268623.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Finegoldia magna ACS-171-V-Col3] gi|302311934|gb|EFK93943.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Finegoldia magna ACS-171-V-Col3] Length = 263 Score = 112 bits (280), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 80/215 (37%), Positives = 120/215 (55%), Gaps = 11/215 (5%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110 I ILG++ FYN + S PR +TE+LVD + + R IL++G G+G Sbjct: 59 IEYILGFKYFYNRKFYTHSSVLIPRFDTEILVDEIIKIN------RKFENILEIGIGSGI 112 Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVT-NGVSERFDTLQSDWFSSVEGLFDVIV 169 + + L E K +GVDI+ KA+E++K NA + N + F + SD + +V FD+IV Sbjct: 113 ISITLNLELNS-KVLGVDINKKAIELSKKNAESLNATNVEF--IYSDLYENVNSKFDLIV 169 Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY 229 SNPPYI+ + L ++ +PR +L GG DGL YR I + S +LN+DG+ + EIGY Sbjct: 170 SNPPYIDKKDFNSLETKILK-EPRSALFGGDDGLYFYRKIINQASDYLNEDGMLAFEIGY 228 Query: 230 NQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 NQ+ + I + KD+ G DRV++ R Sbjct: 229 NQRESIFEILDENGFENRYCIKDFNGFDRVIIARR 263 >gi|326790731|ref|YP_004308552.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Clostridium lentocellum DSM 5427] gi|326541495|gb|ADZ83354.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Clostridium lentocellum DSM 5427] Length = 290 Score = 112 bits (280), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 75/257 (29%), Positives = 125/257 (48%), Gaps = 6/257 (2%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ + V + Q++++ LD+ + + I + + ++ G ++F + Sbjct: 31 DAKLLMKYVLAFNETQLLLERQKRLDEGMQQIYKSLIEKRSSGIPLQQLTGTQEFMGLEF 90 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 ++ PR +TE L++ L + KR + D+GTG+G + + L Sbjct: 91 QVNEHVLIPRQDTETLIEELLEQNKNFSFKRGI----DIGTGSGCISITLAYYIKELTMC 146 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVDCL 183 +DIS +AL++A+ N + + +R TL+SD + E D+IVSNPPYI V+ L Sbjct: 147 AIDISEEALKVARHNIQKHDLEKRIYTLKSDVLENYAEEEKVDLIVSNPPYISKEEVETL 206 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 +EV +PR +L DGLS Y+ I+ +L K G+ + EIGYNQ V I + Sbjct: 207 MIEVIGHEPREALTDEGDGLSFYKRISKAAKSYLKKGGVIAYEIGYNQGKAVTTILKEEG 266 Query: 244 LFLVNAFKDYGGNDRVL 260 V D GNDRV+ Sbjct: 267 YSDVKLLPDLSGNDRVI 283 >gi|162447072|ref|YP_001620204.1| HemK family SAM-dependent methyltransferase [Acholeplasma laidlawii PG-8A] gi|161985179|gb|ABX80828.1| SAM-dependent methyltransferase, HemK family [Acholeplasma laidlawii PG-8A] Length = 283 Score = 112 bits (280), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 71/213 (33%), Positives = 109/213 (51%), Gaps = 13/213 (6%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110 + I+G+ FY + +S PR ETE LV+ L E + V +LDLGTG+GA Sbjct: 69 VQHIVGYSYFYGYKFKVSDQVLIPRRETEQLVEETLLIYDTYFEDQKV-DVLDLGTGSGA 127 Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170 + + L E P + DIS AL +A+ N + +S + + + SDWFS++ +D+IV+ Sbjct: 128 IAITLSIEEPNMQVEASDISVTALMVARENQLN--LSSKVNFIASDWFSNINKKYDIIVA 185 Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230 NPPYI + D +V +P ++L GG+DGL Y I +L + L + E Sbjct: 186 NPPYIPN---DEAVEDVVTKEPSLALYGGVDGLEPYEIILKNAKNYLKEKALIAFEHSMY 242 Query: 231 Q----KVDVVRIFESRKLFLVNAFKDYGGNDRV 259 Q K +++ F+ K V KD G DR+ Sbjct: 243 QSENLKTLILKYFKDAK---VRQLKDLQGKDRM 272 >gi|119505821|ref|ZP_01627887.1| protoporphyrinogen oxidase [marine gamma proteobacterium HTCC2080] gi|119458319|gb|EAW39428.1| protoporphyrinogen oxidase [marine gamma proteobacterium HTCC2080] Length = 271 Score = 112 bits (280), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 88/256 (34%), Positives = 129/256 (50%), Gaps = 19/256 (7%) Query: 8 HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67 +F C + L +H + V + R FL + R E + ILG +F+++ L + Sbjct: 24 QTFECDRSWLYAH----GDEPVTESRVAHFL-GLVERRQAGEPLAYILGQWEFWSLPLKV 78 Query: 68 SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 + D PR +TELLV A+A LP K+ R LDLGTG+GAV LA+ E P + V Sbjct: 79 TPDVLIPRMDTELLVQWAVAL-LPEQSKQ---RCLDLGTGSGAVALAVKHEFPTSEVTAV 134 Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLE 186 D+S AL +A++N + + L+ WF V FD++V+NPPYI D L Sbjct: 135 DLSQPALNVARTNG--QQLQLEVEWLEGSWFEPVAAREFDLVVANPPYIRE---DDDHLH 189 Query: 187 VRDF--DPRISLDGGIDGLSHYRT-IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 D +P+++L GIDGL R +ADG S L G +E G++Q DV + + Sbjct: 190 QGDLPAEPKMALTSGIDGLHALRQLVADGQSA-LGPGGWMLLEHGWDQGPDVRDLLVTHG 248 Query: 244 LFLVNAFKDYGGNDRV 259 V +D G +RV Sbjct: 249 WQAVETRRDLAGRERV 264 >gi|15675119|ref|NP_269293.1| putative protoporphyrinogen oxidase [Streptococcus pyogenes M1 GAS] gi|71910677|ref|YP_282227.1| peptide release factor-glutamine N5-methyltransferase [Streptococcus pyogenes MGAS5005] gi|13622278|gb|AAK34014.1| putative protoporphyrinogen oxidase [Streptococcus pyogenes M1 GAS] gi|71853459|gb|AAZ51482.1| peptide release factor-glutamine N5-methyltransferase [Streptococcus pyogenes MGAS5005] Length = 279 Score = 112 bits (280), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 69/185 (37%), Positives = 102/185 (55%), Gaps = 7/185 (3%) Query: 47 KHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGT 106 +H S I G F +++L + PRPETE LVD LA +L + +LD+GT Sbjct: 64 QHLSPQYITGNAYFRDLKLAVDKRVLIPRPETEELVDMILAENLDA-----PLNVLDIGT 118 Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFD 166 G+GA+ ++L KE P ++ DIS AL++AK+NA + F ++SD FS + FD Sbjct: 119 GSGAIAISLKKERPNWQVTASDISRAALDLAKANADAYQLDITF--IESDVFSLISETFD 176 Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE 226 +IVSNPPYI + + L V +P ++L +G + YR I + +L K+G E Sbjct: 177 IIVSNPPYISYEDKEEVSLNVLQSEPHLALFAKENGYAIYRKIIEQADNYLTKEGKLYFE 236 Query: 227 IGYNQ 231 IGY Q Sbjct: 237 IGYKQ 241 >gi|307544473|ref|YP_003896952.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Halomonas elongata DSM 2581] gi|307216497|emb|CBV41767.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Halomonas elongata DSM 2581] Length = 282 Score = 112 bits (280), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 86/261 (32%), Positives = 131/261 (50%), Gaps = 16/261 (6%) Query: 6 DSHSFLCRVTGLSSHQVIV--DPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63 D+ LC V G+ + D ++ D+ RF I + + + G R+F+ + Sbjct: 25 DAEVLLCHVLGVDRAWLYTWGDREAGGSDQARF--EALIAARAAGQPVAYLTGEREFWGL 82 Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 L T PRP+TE LV +AL+ R+ R R+LDLGTG+GAV LAL E P + Sbjct: 83 SLLTGPSTLIPRPDTETLVAAALS----RMPAR-AGRLLDLGTGSGAVALALASERPDWY 137 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDC 182 +G+D++ A+ +A+ NA G++ DWF+++ E FDVIV+NPPY+ D Sbjct: 138 ALGIDLNPGAVALARRNAERLGIAN-VGFRVGDWFAALDESDFDVIVANPPYLAD---DD 193 Query: 183 LGLEVRD--FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 LE+ D F+PR +L G GL+ + D L DG +E G Q V Sbjct: 194 PHLELGDVRFEPRGALVAGDQGLADLHHLVDASRHRLVADGWLLLEHGAEQGAAVREALC 253 Query: 241 SRKLFLVNAFKDYGGNDRVLL 261 ++ V + +D G++RV L Sbjct: 254 AKGYQDVASEQDLAGHERVSL 274 >gi|197120069|ref|YP_002140496.1| peptide chain release factor methyltransferase [Geobacter bemidjiensis Bem] gi|197089429|gb|ACH40700.1| peptide chain release factor methyltransferase [Geobacter bemidjiensis Bem] Length = 285 Score = 112 bits (280), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 81/238 (34%), Positives = 122/238 (51%), Gaps = 11/238 (4%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 ++ LC L + ++ D L D + + R + E + ILG ++F + Sbjct: 32 EAEWMLCEALSLDRVGLYLNFDKPLSDAELALYRGMVARRGRREPLQYILGSQEFMGLEF 91 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR-ILDLGTGTGAVCLALLKESPFFKG 124 ++ PR +TE+LV A +++ + R ILD+GTG+G V +A+ K P + Sbjct: 92 RVTPAVLIPRHDTEVLVTEA-------VKRGEACRSILDIGTGSGCVAVAVAKALPEAEV 144 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCL 183 VD+S A+E+A+ NA NGV+ +F Q F G FD++VSNPPYI S + L Sbjct: 145 FTVDVSADAIEVARGNAERNGVTVQF--FQGSLFEPFAGKRFDMLVSNPPYITSADLATL 202 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 EVRDF+P +LDGG DGL YR I +LN G E+G Q +V+ + S Sbjct: 203 QQEVRDFEPAGALDGGGDGLDFYRRITADAPAYLNPGGWLLFEVGAGQAGEVLELLNS 260 >gi|312112636|ref|YP_003990952.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Geobacillus sp. Y4.1MC1] gi|311217737|gb|ADP76341.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Geobacillus sp. Y4.1MC1] Length = 288 Score = 112 bits (280), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 79/263 (30%), Positives = 122/263 (46%), Gaps = 11/263 (4%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVR-SLKHESIHRILGWRDFYNV 63 R + LC ++ Q++ +D+ R I + + +H + + G+ FY Sbjct: 24 RAAELLLCHHLRITRAQLLARLRDPIDENARQLFEEDICKHAYEHVPVQHLTGFEQFYGR 83 Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 ++ D PRPETE LV+ L + V ++D+GTG+GA+ + L E+P Sbjct: 84 LFLVNRDVLIPRPETEELVEGVLTRITQLFPRNTTVDVVDVGTGSGAIAITLALENPALS 143 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180 +DIS +AL++A+ NA G F D LQ DV+VSNPPYI + Sbjct: 144 VTAIDISAEALQMAEQNAKRLGADVAFICGDLLQP--LIEANRKVDVVVSNPPYIPEDEI 201 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 L V+D +P +L GG DGL YR++ + L + L + E+G Q V + Sbjct: 202 ASLSPVVKDHEPLRALAGGKDGLDFYRSLTRALPFVLRERALVAFEVGAGQGETVAAML- 260 Query: 241 SRKLF---LVNAFKDYGGNDRVL 260 RK F V D G DR++ Sbjct: 261 -RKTFPHAKVEVVFDINGKDRMV 282 >gi|21230309|ref|NP_636226.1| protoporphyrinogen oxidase [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66769697|ref|YP_244459.1| protoporphyrinogen oxidase [Xanthomonas campestris pv. campestris str. 8004] gi|21111859|gb|AAM40150.1| protoporphyrinogen oxidase [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66575029|gb|AAY50439.1| protoporphyrinogen oxidase [Xanthomonas campestris pv. campestris str. 8004] Length = 283 Score = 112 bits (280), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 78/233 (33%), Positives = 116/233 (49%), Gaps = 11/233 (4%) Query: 31 DDRQRFFLTNAIV-RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFS 89 + QRF A+V R + E + + G R F+ + L +S+ T PR +TE LV+ + Sbjct: 52 EQAQRF---GALVERRHQGEPVAYLTGSRGFWTLDLAVSTATLIPRADTETLVE----LA 104 Query: 90 LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 L R+E VR++DLGTG+GA+ LA+ E P + + D S AL IA+ NA +G+ Sbjct: 105 LERLELTAGVRVVDLGTGSGAIALAIASERPQAQLIATDASADALAIARHNAHAHGL-HN 163 Query: 150 FDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208 + W + G FD+I SNPPYI + ++R ++P +L G DGL R Sbjct: 164 VECRLGHWLQPLAGERFDLIASNPPYIAAADPHLQQGDLR-YEPASALASGSDGLDDIRL 222 Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 I HL G +E G++Q V + +R V +D DRV L Sbjct: 223 IVADTPAHLLAGGWLLLEHGWDQGEAVAALLIARGFAAVATHQDLEQRDRVTL 275 >gi|319761652|ref|YP_004125589.1| protein-(glutamine-n5) methyltransferase, release factor-specific [Alicycliphilus denitrificans BC] gi|317116213|gb|ADU98701.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Alicycliphilus denitrificans BC] Length = 281 Score = 112 bits (280), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 74/216 (34%), Positives = 107/216 (49%), Gaps = 9/216 (4%) Query: 43 VRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRIL 102 R E + + G ++FY + L + + +PRP+TE+LVD AL P R + Sbjct: 63 ARRAAGEPVAYLTGSKEFYGLPLRVDARVLDPRPDTEILVDWALELLAPLPAPR----VA 118 Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162 DLGTG+GA+ LAL P + + +D S AL +A++NA G+ RF +Q+DW + + Sbjct: 119 DLGTGSGAIALALQHARPDARVLAMDASAGALAVARANAERLGLPVRF--VQADWLAGIA 176 Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL 222 G FD IVSNPPYI + L +P +L G DGL R IA L G Sbjct: 177 GPFDAIVSNPPYIPAQDPHLAALA---HEPLSALASGADGLDDIRAIAAQAPALLAPGGW 233 Query: 223 CSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258 +E G++Q V + + L V + D G R Sbjct: 234 LLLEHGWDQAGAVQALLRASGLARVQSRDDLAGIAR 269 >gi|332980840|ref|YP_004462281.1| protein-(glutamine-N5) methyltransferase [Mahella australiensis 50-1 BON] gi|332698518|gb|AEE95459.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Mahella australiensis 50-1 BON] Length = 281 Score = 112 bits (280), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 82/264 (31%), Positives = 126/264 (47%), Gaps = 14/264 (5%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A RD L + + + +D L Q+ I + + +L F + Sbjct: 22 ARRDVEILLQELLDVDRSALYLDRSRALLPEQKIMFEQWIKQRCARMPLQYVLHKAWFMD 81 Query: 63 VRLTLSSDTFEPRPETELLVD----SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118 + L + PRPETELLV+ A S P +++LD+GTG+GA+ +AL + Sbjct: 82 MELYVDERVLIPRPETELLVEVVIKEAKGMSEP-------LQVLDIGTGSGAIAIALARH 134 Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIES 177 + VDIS AL +A+ N + +R L+ + F V+G+ FD+IVSNPPYI Sbjct: 135 MSGCRVWAVDISPDALAVARINVGKYSLQQRVTLLEGNLFEPVKGMAFDIIVSNPPYIVR 194 Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237 + L EVR +P +L+GG DGL YR + L G ++EIGY+Q V Sbjct: 195 DDLIELEPEVRS-EPEPALNGGDDGLDFYRKLCHA-GELLKPHGFLALEIGYDQGQAVSD 252 Query: 238 IFESRKLFLVNAFKDYGGNDRVLL 261 I ++ + KD+ DR++L Sbjct: 253 ILKACGFKDIQVLKDFANMDRIVL 276 >gi|167582489|ref|ZP_02375363.1| hemK protein [Burkholderia thailandensis TXDOH] Length = 285 Score = 112 bits (280), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 85/264 (32%), Positives = 130/264 (49%), Gaps = 19/264 (7%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDR--QRFFLTNAIVRSLKHESIHRILGWRDFYNV 63 D+ L G S Q+I D LD +R+ A R E + ++ G R+F+ + Sbjct: 24 DARILLAHALGWSRTQLITRADEPLDAAAIERYLALEA--RRAAGEPVAQLTGAREFFGL 81 Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 ++ D PRPETELLV++AL I+ +LDLGTG+GA+ +++ P + Sbjct: 82 EFDVTPDVLIPRPETELLVETALDA----IDGIASPCVLDLGTGSGAIAVSIASVRPDAR 137 Query: 124 GVGVDISCKALEIAKSNA------VTNGVSERFDTLQSDWFSSVE-GL-FDVIVSNPPYI 175 +D S AL++A+ NA G RF L+SDW+++++ GL F V+VSNPPYI Sbjct: 138 VWALDRSAAALDVARRNARKLLDPARAGGPLRF--LESDWYAALDPGLRFHVVVSNPPYI 195 Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235 ++R F+PR +L DGL+ RTI G + G +E GY+Q V Sbjct: 196 ARHDPHLAEGDLR-FEPRGALTDEDDGLAAIRTIVAGAHAFVAPGGALWIEHGYDQAAAV 254 Query: 236 VRIFESRKLFLVNAFKDYGGNDRV 259 + E+ V + D +R Sbjct: 255 RALLEAAGFADVESLADLASIERA 278 >gi|329897170|ref|ZP_08271910.1| HemK family modification methylase [gamma proteobacterium IMCC3088] gi|328921325|gb|EGG28719.1| HemK family modification methylase [gamma proteobacterium IMCC3088] Length = 275 Score = 112 bits (279), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 81/228 (35%), Positives = 116/228 (50%), Gaps = 10/228 (4%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 ++H L +V+GL + P+ L R + R + +LG R+FY + L Sbjct: 22 EAHLLLEQVSGLERTTLFAWPERELAPRVVQQYRALVDRRASGVPVAYLLGRREFYGLDL 81 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALLKESPFFKG 124 + PRPETELLVD AL +L DV +LDLGTG+GA+ LAL + P + Sbjct: 82 HVDQRVLIPRPETELLVDVALGLAL------DVKAEVLDLGTGSGAIALALASQRPQWSI 135 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCL 183 VD S AL++A +N G+ + D SDWF+S+ + FD+IVSNPPY+E Sbjct: 136 CAVDRSEDALDVATANQENLGI-KNIDFYCSDWFASLPQYQFDLIVSNPPYVEPDSAYLQ 194 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231 +VR F+P +L GL+ I D ++L G +E GY Q Sbjct: 195 QGDVR-FEPIKALVAPNAGLADLFAIIDQAPKYLKSGGTLWLEHGYQQ 241 >gi|260655566|ref|ZP_05861054.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Jonquetella anthropi E3_33 E1] gi|260630014|gb|EEX48208.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Jonquetella anthropi E3_33 E1] Length = 285 Score = 112 bits (279), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 78/244 (31%), Positives = 115/244 (47%), Gaps = 12/244 (4%) Query: 20 HQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETE 79 H + DP + R +++A+ R L E + I G F+ L + PRPETE Sbjct: 48 HARLQDPVGAEEAR---VISSALCRRLNREPVQYITGRCQFWGRNLKVLPGCLVPRPETE 104 Query: 80 LLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKS 139 LV + L+ + LD GTGTG + L+LL E P + V +I+ ++++ A Sbjct: 105 FLVQAVLS-------RFKAGTFLDWGTGTGCIALSLLTEQPKARAVMAEINPRSIKCAWE 157 Query: 140 NAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG 198 N G+ R S + G FD+I+SNPPY+ S VD L EV ++PR++LDG Sbjct: 158 NLKEAGLLSRALLWHSRTPDDIPGGPFDLIISNPPYVPSGQVDGLMPEVSQWEPRVALDG 217 Query: 199 GIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258 G DGL Y + L GL +VE G +V +R + L + D G R Sbjct: 218 GPDGLVPYGPLIYFARSRLVPGGLLAVEFGGASQVQSLRQM-AEGLSELECGADLSGEKR 276 Query: 259 VLLF 262 L+ Sbjct: 277 YFLW 280 >gi|225076162|ref|ZP_03719361.1| hypothetical protein NEIFLAOT_01194 [Neisseria flavescens NRL30031/H210] gi|224952505|gb|EEG33714.1| hypothetical protein NEIFLAOT_01194 [Neisseria flavescens NRL30031/H210] Length = 270 Score = 112 bits (279), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 86/259 (33%), Positives = 121/259 (46%), Gaps = 12/259 (4%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 ++ L +G + Q++ + D R + R L E + ILG R+FY Sbjct: 16 EARMLLQYASGYTRVQLLTRGGEEIPDEVRQRVDRLAQRRLNGEPVAYILGVREFYGRCF 75 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 ++ PRPETE LV++ LA LP + R+ DLGTG+GA+ + + E Sbjct: 76 AVNPSVLIPRPETEHLVEAVLA-RLP-----ENGRVWDLGTGSGAIAVTVALERVDADVR 129 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS---VEGLFDVIVSNPPYIESVIVDC 182 DIS AL+ A+ NA G F Q WF + EG +DVIVSNPPYIE Sbjct: 130 ASDISVGALDTARQNAAELGAKVEF--AQGSWFDTDRPSEGRYDVIVSNPPYIEDGDEHL 187 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 ++R F+P+ +L DGLSH R I ++L +G E GY+Q V I Sbjct: 188 SQGDLR-FEPQNALTDFSDGLSHIRHITQEAPKYLKANGWLLFEHGYDQGEAVRNIMLEN 246 Query: 243 KLFLVNAFKDYGGNDRVLL 261 V +D G DR+ L Sbjct: 247 GFAEVATEQDLAGLDRITL 265 >gi|154707092|ref|YP_001425369.1| peptide release factor-glutamine N5-methyltransferase [Coxiella burnetii Dugway 5J108-111] gi|154356378|gb|ABS77840.1| peptide release factor-glutamine N5-methyltransferase [Coxiella burnetii Dugway 5J108-111] Length = 277 Score = 112 bits (279), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 78/240 (32%), Positives = 124/240 (51%), Gaps = 9/240 (3%) Query: 26 PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85 P+ L+ Q+ L+ + R LK E I ILG ++F+++ L ++ D PRPETE+LV Sbjct: 45 PEIQLNSSQQKTLSAYVKRRLKGEPIAYILGQKEFWSLNLKVTPDVLIPRPETEMLVGWI 104 Query: 86 LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145 L +LP+ EK +RI DLGTG+GAV LA+ E P + D S AL+IA+ NA + Sbjct: 105 LK-NLPKDEK---LRIADLGTGSGAVALAIAVERPHWTIDATDNSQAALKIAEINAKQHE 160 Query: 146 VSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204 + + + +W ++ + IV NPPYI L+ +PR +L G DGLS Sbjct: 161 I-KNCNFYHGEWCQALPRRDYHAIVGNPPYIPD---KDQHLQQLKHEPREALAAGSDGLS 216 Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 + I +L G +E GY+Q ++ + ++ + +D G R+++ R Sbjct: 217 AIKIIIHEAKSYLVNGGWLLLEHGYDQAEKIMTLMQADGYREITDRRDLAGLSRMMVARR 276 >gi|313903649|ref|ZP_07837039.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Thermaerobacter subterraneus DSM 13965] gi|313466202|gb|EFR61726.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Thermaerobacter subterraneus DSM 13965] Length = 331 Score = 112 bits (279), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 69/249 (27%), Positives = 114/249 (45%), Gaps = 10/249 (4%) Query: 17 LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRP 76 + +++ +P++ L ++R + E + IL +F+ ++ T PRP Sbjct: 82 MPGARLLAEPEAPLPPAAWARFVQWVLRRARREPVAYILQRAEFFGRPFRVTPATLIPRP 141 Query: 77 ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136 ETE+LV++ L R + + DLGTGTG V + L E P + + D S +AL++ Sbjct: 142 ETEVLVEAVL-----RTLSPEPAVVADLGTGTGIVGVTLAAERPLWTVLVTDCSARALKV 196 Query: 137 AKSNAVTNGVSERFDTLQSDWFSSV-----EGLFDVIVSNPPYIESVIVDCLGLEVRDFD 191 A+ NA +GV+ R DW + G + SNPPY+ S + L EV ++ Sbjct: 197 ARDNAARHGVAARMQFWAGDWAEPLLAGGWAGKLAAVASNPPYVASGDLRQLQAEVYRYE 256 Query: 192 PRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK 251 P ++L G GL Y + G R L G +E+G Q V + + + + Sbjct: 257 PHLALCPGPTGLEAYHRLIPGAVRLLAPGGWIFLEVGAGQAAAVRHLLGAVGCRNLCQWP 316 Query: 252 DYGGNDRVL 260 D G RV+ Sbjct: 317 DLAGIPRVV 325 >gi|150026062|ref|YP_001296888.1| methylase of polypeptide chain release factors [Flavobacterium psychrophilum JIP02/86] gi|149772603|emb|CAL44086.1| Methylase of polypeptide chain release factors [Flavobacterium psychrophilum JIP02/86] Length = 285 Score = 112 bits (279), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 76/245 (31%), Positives = 127/245 (51%), Gaps = 12/245 (4%) Query: 22 VIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELL 81 +++ PD LD+ Q +++ + + I ILG F+ + ++ +T PRPETE L Sbjct: 42 LVLSPDLKLDNIQLLQWETVLLQLKEQKPIQYILGETQFFGLPFYVNENTLIPRPETEEL 101 Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 V+ + +L +I ++ILD+GTG+G + ++L K P +D+S KAL A+ NA Sbjct: 102 VEWIIKENL-KISSLKNLKILDIGTGSGCIAISLAKNLPNASVFAIDVSDKALATAQKNA 160 Query: 142 VTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL-- 196 V N V F + LQ++ + FD+IVSNPPY+ ++ + V +++P ++L Sbjct: 161 VLNEVDITFIEKNILQTE---DLNQEFDIIVSNPPYVRNLEKKEIHKNVLEYEPHLALFV 217 Query: 197 -DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGG 255 D D L YR I + +R+L+ +G EI + V + E KD G Sbjct: 218 EDN--DSLLFYRKITELATRNLSNNGQLYFEINQYLGKETVELLEKYNFKNTTLKKDIYG 275 Query: 256 NDRVL 260 NDR++ Sbjct: 276 NDRMI 280 >gi|21674307|ref|NP_662372.1| HemK protein [Chlorobium tepidum TLS] gi|21647480|gb|AAM72714.1| hemK protein [Chlorobium tepidum TLS] Length = 294 Score = 112 bits (279), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 79/257 (30%), Positives = 123/257 (47%), Gaps = 8/257 (3%) Query: 10 FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69 L V GL Q+ +D + L ++ A L+ + I G FY + + Sbjct: 35 LLGHVLGLQRLQLYLDHERPLTLKELEAFRAACRERLQGRPVQYIAGEAFFYGYQFFVDE 94 Query: 70 DTFEPRPETELLVDSALA-FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128 PRPETEL+++ A+ + ++ D ILD+GTG+G + + L P + D Sbjct: 95 RVLIPRPETELVLEHAMERLAASGLDSADSPSILDVGTGSGCIAITLALRLPGARVTAAD 154 Query: 129 ISCKALEIAKSNAVTNGVSERF-----DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183 +S AL++A+ NA +GVSER D L + + +V G FD++VSNPPYI L Sbjct: 155 VSADALDVARRNADAHGVSERIRFVEADALSASFADAVGGPFDLLVSNPPYIPEAEWATL 214 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 EVR ++PR++L G +Y++IA L K G+ E+ + +V + S Sbjct: 215 QEEVRRYEPRLALVAPT-GFEYYQSIAVAAPSLLRKGGVLCFELHADGAAEVRNLLGS-S 272 Query: 244 LFLVNAFKDYGGNDRVL 260 V +DY DR L Sbjct: 273 FADVQVMQDYNKLDRGL 289 >gi|22299379|ref|NP_682626.1| protoporphyrinogen IX oxidase [Thermosynechococcus elongatus BP-1] gi|22295562|dbj|BAC09388.1| protoporphyrinogen IX oxidase [Thermosynechococcus elongatus BP-1] Length = 291 Score = 112 bits (279), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 81/273 (29%), Positives = 133/273 (48%), Gaps = 26/273 (9%) Query: 4 LRDSHSFLCRVTGLSSHQVIVD----------PDSVLDDR-QRFFLTNAIVRSLKHESIH 52 LR+ FL TGLS ++ + P + L +R QR R + + Sbjct: 26 LRELKQFLRAFTGLSPLEITLRRFPPQIHLKLPLTELQERWQR--------RWQERVPLQ 77 Query: 53 RILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVC 112 ++G ++++ L ++ PRPETE L+ + +A ++P +++ LDLGTG+GA+ Sbjct: 78 YLIGVAHWHDLELVVTPSVLIPRPETEELL-AVVAATVPPWQQQG--HWLDLGTGSGAIA 134 Query: 113 LALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIV 169 + L + P VD S +ALE+A+ N + +R +WF + +G IV Sbjct: 135 IGLARLFPAALIHAVDCSSEALEVAQVNIQKYALGDRVRCYVGNWFDPIVPLQGQVQGIV 194 Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY 229 SNPPYI + +V L EV+ +P ++LDGG DGL R I + +L G +E+ Sbjct: 195 SNPPYIPTSVVATLQPEVQYHEPLLALDGGTDGLQAIRQILETAPEYLQPQGWLFIELMA 254 Query: 230 NQKVDVVRIFESRKLF-LVNAFKDYGGNDRVLL 261 Q V + + + + V +D G+DR LL Sbjct: 255 TQGKAVAALAMATQAYERVEILRDLSGHDRFLL 287 >gi|295094044|emb|CBK83135.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Coprococcus sp. ART55/1] Length = 287 Score = 112 bits (279), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 74/240 (30%), Positives = 123/240 (51%), Gaps = 5/240 (2%) Query: 22 VIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELL 81 ++ D V DD+ ++ RS + + I G ++F + D PR +TE L Sbjct: 42 IMAREDDVDDDKSEAYMKLIEKRSTRI-PLQYITGEQNFMGYDFDTAEDVLIPRMDTETL 100 Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN- 140 V++AL DV LD+ G+G + ++ + + V D+S A+ +A+ N Sbjct: 101 VETALKLVKDADHNVDV---LDMCCGSGCIGVSFGLWNKNSRIVLADVSEAAIGLARRNV 157 Query: 141 AVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200 A +RF+ +++D F + G +D+I+SNPPYI S +++ L EVR+ +P ++LDG Sbjct: 158 AKLCAGDDRFEVVRTDLFEQISGKYDLILSNPPYIRSDVIETLMPEVREHEPHLALDGTA 217 Query: 201 DGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 DGL YR IAD ++ +G EIG +Q DV + ++ +D GNDRV+ Sbjct: 218 DGLYFYRIIADKAREYIKDEGYVVFEIGNDQAEDVQYLLVDSGYDDIHVVQDLSGNDRVV 277 >gi|258406202|ref|YP_003198944.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Desulfohalobium retbaense DSM 5692] gi|257798429|gb|ACV69366.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Desulfohalobium retbaense DSM 5692] Length = 300 Score = 112 bits (279), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 68/222 (30%), Positives = 111/222 (50%), Gaps = 5/222 (2%) Query: 44 RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103 R K E + I+G ++FY + + PRPETE ++D+ + P + R D Sbjct: 76 RRSKFEPVAYIVGCKEFYGLDFHVRPGVLIPRPETETIIDAVREWFTPE----SIFRFAD 131 Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF-SSVE 162 TG+G + + L P +GV +DIS +AL IA+SN +G+ +R +Q D + Sbjct: 132 TCTGSGILGVVLATYFPRSQGVLIDISDEALAIARSNVQLHGLKQRLLAVQGDLLHPTAR 191 Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL 222 D++V+NPPY+ V+ +VR +PR++L+GG G + + + R L G+ Sbjct: 192 NQLDLVVANPPYLAPREVEETMPDVRLHEPRLALEGGDTGCLFLQRLVEQAQRALKPGGM 251 Query: 223 CSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 VE+G+ Q+ V F KD G+DRV++ R Sbjct: 252 VCVEMGWQQEQWVQGQFHGPAWERTAVLKDLAGHDRVVVAHR 293 >gi|88803654|ref|ZP_01119178.1| putative protoporphyrinogen oxidase [Polaribacter irgensii 23-P] gi|88780387|gb|EAR11568.1| putative protoporphyrinogen oxidase [Polaribacter irgensii 23-P] Length = 301 Score = 112 bits (279), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 85/262 (32%), Positives = 124/262 (47%), Gaps = 29/262 (11%) Query: 22 VIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELL 81 +++PD ++ D L I R K E I ILG +FY + ++ +T PRPETE L Sbjct: 48 TVLNPDLIIGDVLVTSLKKIIDRLQKEEPIQYILGNTEFYGLPFLVNKNTLIPRPETEEL 107 Query: 82 VDSAL----------------AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 V L A P + ILD+GTGTG + ++L K SP + Sbjct: 108 VSWVLHEIKEIHGEHKNKATNAIETP-------LTILDIGTGTGCISVSLAKNSPQSEIT 160 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIESVIVDCL 183 +D S AL IAK NA+ N V+ F +Q D + E FD+I+SNPPY+ + + Sbjct: 161 AIDNSATALHIAKKNALLNNVAVNF--IQLDILKTTELPQKFDIIISNPPYVRELEKVEI 218 Query: 184 GLEVRDFDPRISL-DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 V +P ++L + L Y IAD + L K+GL EI + +++ + Sbjct: 219 NKNVLANEPHLALFVSDENPLLFYDKIADLAIQGLTKNGLLFFEINQYLAKETIKMLTKK 278 Query: 243 KLFLVNAFKDYGGNDRVLLFCR 264 + KD GNDR+LL CR Sbjct: 279 GFHSIQLKKDLFGNDRMLL-CR 299 >gi|120600165|ref|YP_964739.1| HemK family modification methylase [Shewanella sp. W3-18-1] gi|146291907|ref|YP_001182331.1| HemK family modification methylase [Shewanella putrefaciens CN-32] gi|120560258|gb|ABM26185.1| modification methylase, HemK family [Shewanella sp. W3-18-1] gi|145563597|gb|ABP74532.1| modification methylase, HemK family [Shewanella putrefaciens CN-32] gi|319425198|gb|ADV53272.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Shewanella putrefaciens 200] Length = 282 Score = 112 bits (279), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 82/259 (31%), Positives = 129/259 (49%), Gaps = 12/259 (4%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVL--DDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63 D+ FL + + P+ L D +RF +++ K + I+G R+F+++ Sbjct: 28 DAEVFLLYCLNKNRAYLYTWPEKALTIDQWKRF--QQMVLKRQKGVPVAHIVGEREFWSL 85 Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 ++ T PRP+TE+LV++AL L K +LDLGTGTGA+ LAL E ++ Sbjct: 86 PFIVNDTTLIPRPDTEILVETALNLPLSTYAK-----VLDLGTGTGAIALALASERESWE 140 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDC 182 VD A+ +A +N N + + LQSDWFS+V+ FD+IVSNPPYI+ Sbjct: 141 ITAVDKVDDAVALAIANR-ENLKLPQVEILQSDWFSAVKSRDFDLIVSNPPYIDEADEHL 199 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 +VR F+P+ +L +G + IA +L +G +E G+ Q V + Sbjct: 200 HQGDVR-FEPQSALTAAEEGFADLYYIAKTARDYLKPNGYILLEHGFEQAVKLRGKLIEL 258 Query: 243 KLFLVNAFKDYGGNDRVLL 261 V +D+G NDR + Sbjct: 259 GYENVATVRDFGSNDRCTM 277 >gi|93005985|ref|YP_580422.1| HemK family modification methylase [Psychrobacter cryohalolentis K5] gi|92393663|gb|ABE74938.1| modification methylase, HemK family [Psychrobacter cryohalolentis K5] Length = 308 Score = 112 bits (279), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 74/225 (32%), Positives = 116/225 (51%), Gaps = 22/225 (9%) Query: 54 ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEK-----RDVVRILDLGTGT 108 + G + F+++ ++ T PRP+TE+LV+ L + E+ + R+LDLGTG+ Sbjct: 79 LTGIQAFWSLDFAVNEHTLIPRPDTEVLVEQVLHWINTANEEFVPNAANNKRLLDLGTGS 138 Query: 109 GAVCLALLKESPF--------FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 G + ++L E ++ V VD S +AL+IA+ NAV+N V F + S W+ + Sbjct: 139 GCIAISLAHELKLARKLEPVSWQVVAVDFSLEALKIAQHNAVSNAVDIEF--VHSSWYDA 196 Query: 161 V----EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216 + E LFDVIVSNPPYI+ GL +P +L GL+ I ++ Sbjct: 197 LSTQDEHLFDVIVSNPPYIDEADEHLAGLLA---EPISALSAPNHGLADIEHIVHHAPQY 253 Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 L GL ++E G++Q ++F + KD+GGNDRV L Sbjct: 254 LKVGGLLAIEHGFDQGHAARQLFADNHFDNIQTIKDFGGNDRVTL 298 >gi|261381287|ref|ZP_05985860.1| protein-(glutamine-N5) methyltransferase [Neisseria subflava NJ9703] gi|284795767|gb|EFC51114.1| protein-(glutamine-N5) methyltransferase [Neisseria subflava NJ9703] Length = 270 Score = 112 bits (279), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 82/221 (37%), Positives = 108/221 (48%), Gaps = 12/221 (5%) Query: 44 RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103 R LK E + +LG R+FY R T++ PR ETE LV++ L LP R+ D Sbjct: 54 RRLKGEPMAYLLGEREFYGRRFTVNPHVLIPRHETEHLVEAVLK-RLP-----SQGRVWD 107 Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS--- 160 LGTG+GA+ + + E DIS AL+ A+ NA G F Q WF + Sbjct: 108 LGTGSGAIAVTIALERGDADVRASDISVGALDTARQNAAELGAKVEF--AQGSWFDTDKP 165 Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220 EG +DVIVSNPPYIE ++R F+P+ +L DGLSH R I ++L + Sbjct: 166 SEGRYDVIVSNPPYIEDGDEHLSQGDLR-FEPQNALTDFSDGLSHIRHITQEAPKYLKAN 224 Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 G E GY+Q V I V +D G DRV L Sbjct: 225 GWLLFEHGYDQGKAVRNIMLENGFAEVATEQDLAGLDRVTL 265 >gi|116333898|ref|YP_795425.1| methylase of polypeptide chain release factor [Lactobacillus brevis ATCC 367] gi|116099245|gb|ABJ64394.1| Methylase of polypeptide chain release factor [Lactobacillus brevis ATCC 367] Length = 283 Score = 112 bits (279), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 69/221 (31%), Positives = 113/221 (51%), Gaps = 9/221 (4%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101 + R E +LG+ FY ++ T PRPETE LV+ L ++ ++ ++ Sbjct: 62 LARVCAGEPAQYVLGYAPFYGREFQVTPATLIPRPETEELVEWVL-----QVVRQPAAKV 116 Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 +D+GTG+GA+ + L KE P + DIS A+ +A+ NA ++ + D + V Sbjct: 117 IDVGTGSGAIAVTLKKERPMWLVTATDISDAAIAVAQKNA--QRLTAQLMWATGDLLAPV 174 Query: 162 EGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220 G FDVIVSNPPYI+ + + V+ ++P +L GL+ Y+ A ++ +L Sbjct: 175 TGQRFDVIVSNPPYIDRTEMPEMDTSVKRYEPEQALYAADHGLAFYQRFAQVLTTYLVPT 234 Query: 221 GLCSVEIGYNQKVDVVRIF-ESRKLFLVNAFKDYGGNDRVL 260 G EIGY+Q V +IF ++ V D G+DR++ Sbjct: 235 GDFFAEIGYHQGAAVKQIFKQALPDAQVTVKSDINGHDRMI 275 >gi|303234963|ref|ZP_07321587.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Finegoldia magna BVS033A4] gi|302493818|gb|EFL53600.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Finegoldia magna BVS033A4] Length = 263 Score = 112 bits (279), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 80/215 (37%), Positives = 120/215 (55%), Gaps = 11/215 (5%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110 I ILG++ FYN + S PR +TE+LVD + + R IL++G G+G Sbjct: 59 IEYILGFKYFYNRKFYTDSSVLIPRFDTEILVDEIININ------RKFENILEIGIGSGI 112 Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVT-NGVSERFDTLQSDWFSSVEGLFDVIV 169 + + L E K +GVDI+ KA+E++K NA + N + F + SD + +V FD+IV Sbjct: 113 ISITLNLELNS-KVLGVDINEKAIELSKKNAESLNATNVEF--IYSDLYENVNSKFDLIV 169 Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY 229 SNPPYI+ + L ++ +PR +L GG DGL YR I + S +LN+DG+ + EIGY Sbjct: 170 SNPPYIDKKDFNSLETKILK-EPRSALFGGDDGLYFYRKIINQASDYLNEDGMLAFEIGY 228 Query: 230 NQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 NQ+ + I + KD+ G DRV++ R Sbjct: 229 NQRESIFEILDENGFENHYCIKDFNGFDRVIIARR 263 >gi|295400674|ref|ZP_06810651.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Geobacillus thermoglucosidasius C56-YS93] gi|294977255|gb|EFG52856.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Geobacillus thermoglucosidasius C56-YS93] Length = 288 Score = 112 bits (279), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 79/263 (30%), Positives = 122/263 (46%), Gaps = 11/263 (4%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSL-KHESIHRILGWRDFYNV 63 R + LC ++ Q++ +D+ R I + + +H + + G+ FY Sbjct: 24 RAAELLLCHHLRITRAQLLARLRDPIDENARQLFEEDICKHVYEHVPVQHLTGFEQFYGR 83 Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 ++ D PRPETE LV+ L + V ++D+GTG+GA+ + L E+P Sbjct: 84 LFLVNRDVLIPRPETEELVEGVLTRITQLFPRNTTVDVVDVGTGSGAIAITLALENPALS 143 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180 +DIS +AL++A+ NA G F D LQ DV+VSNPPYI + Sbjct: 144 ITAIDISAEALQMAEQNAKRLGADVAFICGDLLQP--LIEANRKVDVVVSNPPYIPEDEI 201 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 L V+D +P +L GG DGL YR++ + L + L + E+G Q V + Sbjct: 202 ASLSPVVKDHEPLRALAGGKDGLDFYRSLTRALPFVLRERALVAFEVGAGQGETVAAML- 260 Query: 241 SRKLF---LVNAFKDYGGNDRVL 260 RK F V D G DR++ Sbjct: 261 -RKTFPHAKVEVVFDINGKDRMV 282 >gi|299531472|ref|ZP_07044878.1| modification methylase, HemK family protein [Comamonas testosteroni S44] gi|298720435|gb|EFI61386.1| modification methylase, HemK family protein [Comamonas testosteroni S44] Length = 285 Score = 112 bits (279), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 74/213 (34%), Positives = 104/213 (48%), Gaps = 11/213 (5%) Query: 54 ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113 + G ++FY + L + S +PRP+TE LVD AL LP R++DLGTG+GA+ L Sbjct: 78 LTGSKEFYGLDLAVDSRVLDPRPDTETLVDWALEL-LPEGAAH---RVVDLGTGSGAIAL 133 Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL--FDVIVSN 171 AL + P + + VD S AL +A SNA + +F W ++G D+IVSN Sbjct: 134 ALQSQRPSARVIAVDASADALAVASSNAARLQLPVQF--AHGSWLQPLDGQEPVDLIVSN 191 Query: 172 PPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231 PPYI + D L +P +L G DGL R+I D L G E G++Q Sbjct: 192 PPYIRA---DDPHLAALTHEPLSALASGADGLEDIRSIIDQAPARLKDGGWLLFEHGWDQ 248 Query: 232 KVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 DV ++ ++ V D G R CR Sbjct: 249 AEDVAQLMQAAGFEQVQHRHDLAGIARCTGGCR 281 >gi|116618872|ref|YP_819243.1| methylase of polypeptide chain release factor [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|116097719|gb|ABJ62870.1| Methylase of polypeptide chain release factor [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 330 Score = 112 bits (279), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 76/217 (35%), Positives = 115/217 (52%), Gaps = 6/217 (2%) Query: 46 LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLG 105 +K++ ILG FY + PRPETE LV+ L + + V +LD+G Sbjct: 114 VKNKPPQYILGHAPFYGREFMVDERVLIPRPETEQLVEWILKDA---GNTKHPVSVLDIG 170 Query: 106 TGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL- 164 TG+GA+ L+ E+ KG DIS AL +A+ NA +S ++SD FS++ GL Sbjct: 171 TGSGAIIETLMLENDRVKGFAADISQDALTVAEMNAQRFNLS-HLHFVESDVFSALSGLK 229 Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224 FD+IVSNPPYI + + + V F+P +L DGL+ Y+ IA G+ HL + G Sbjct: 230 FDLIVSNPPYISNSDENEMDDSVLTFEPHTALFAENDGLAIYKKIARGLDAHLTEHGRAY 289 Query: 225 VEIGYNQKVDVVRIFESR-KLFLVNAFKDYGGNDRVL 260 EIGY Q V ++ ++ + +D+ G DR++ Sbjct: 290 FEIGYKQGKAVQQLLQAALPKAKITLRQDFSGLDRMI 326 >gi|120612309|ref|YP_971987.1| HemK family modification methylase [Acidovorax citrulli AAC00-1] gi|120590773|gb|ABM34213.1| [protein release factor]-glutamine N5-methyltransferase [Acidovorax citrulli AAC00-1] Length = 311 Score = 111 bits (278), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 76/217 (35%), Positives = 108/217 (49%), Gaps = 10/217 (4%) Query: 43 VRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRIL 102 R E + + G ++FY + L + + +PRP+TE LVD AL + + R+ Sbjct: 70 ARRQAGEPVAYLTGRKEFYGLPLQVDARVLDPRPDTETLVDWALEV----LRPLPLPRVA 125 Query: 103 DLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 DLGTG+GA+ LAL P + V VD S AL +A++NA +S D ++++W + Sbjct: 126 DLGTGSGAIALALRHGLPGAQVVLAVDASADALAVARANARRLHLS--VDFVRTNWLDGI 183 Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221 G FD IVSNPPYIE D L +PR +L G DGL RTI S L G Sbjct: 184 SGPFDAIVSNPPYIEE---DDPHLAALVHEPRQALASGPDGLDDIRTIVVQSSSRLAPGG 240 Query: 222 LCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258 +E G+NQ V + + V + D G+ R Sbjct: 241 WLLLEHGWNQAQAVQALLRNAGYAEVQSRADLAGHAR 277 >gi|225374518|ref|ZP_03751739.1| hypothetical protein ROSEINA2194_00133 [Roseburia inulinivorans DSM 16841] gi|225213756|gb|EEG96110.1| hypothetical protein ROSEINA2194_00133 [Roseburia inulinivorans DSM 16841] Length = 164 Score = 111 bits (278), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 67/162 (41%), Positives = 92/162 (56%), Gaps = 2/162 (1%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 +++LD+ TG+G + +++L KG VDIS +A+ +AK NA N V F+ +SD F Sbjct: 1 MKVLDMCTGSGCIIISILHNVEGVKGYAVDISKQAVNVAKENAKLNEVPVLFE--RSDLF 58 Query: 159 SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 V FDVIVSNPPYI + ++ L EV+ F+P +LDG DGL YR I + +LN Sbjct: 59 EMVTEKFDVIVSNPPYIPTDVIPQLMPEVQVFEPVEALDGKEDGLYFYRKIVEQSRDYLN 118 Query: 219 KDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 G EIGY+Q DV + V KD GNDRV+ Sbjct: 119 PGGYLMFEIGYDQGKDVSEMMTDAGFSDVCVKKDLAGNDRVV 160 >gi|332878223|ref|ZP_08445951.1| protein-(glutamine-N5) methyltransferase [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332683835|gb|EGJ56704.1| protein-(glutamine-N5) methyltransferase [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 281 Score = 111 bits (278), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 72/223 (32%), Positives = 119/223 (53%), Gaps = 9/223 (4%) Query: 43 VRSLK-HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101 +R L+ H+ I ILG F++ R + + PRPETE LVD L P + ++I Sbjct: 62 IRELQNHKPIQYILGETVFFSYRFLVDENVLIPRPETEELVDWVLTTVTPTSKP---LKI 118 Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF--S 159 +D+GTG+G + ++L K P + VD+S KAL++A+ NA NGV+ F LQ D S Sbjct: 119 IDIGTGSGCIAISLAKSLPNAEVTAVDVSAKALQVARRNAELNGVTINF--LQQDILQTS 176 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL-DGGIDGLSHYRTIADGVSRHLN 218 ++ +D+I+SNPPY+ S+ + V +++P ++L D L Y IA + L+ Sbjct: 177 TLPDTYDIIISNPPYVRSLEKAEMQANVLEYEPHLALFVSDTDPLLFYDRIATLARKALS 236 Query: 219 KDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 G EI + + + +++ V +D GNDR+++ Sbjct: 237 PQGSLFFEINQYLGDETIALLKAKGFEKVVLRQDLSGNDRMIM 279 >gi|298529664|ref|ZP_07017067.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Desulfonatronospira thiodismutans ASO3-1] gi|298511100|gb|EFI35003.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Desulfonatronospira thiodismutans ASO3-1] Length = 279 Score = 111 bits (278), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 83/246 (33%), Positives = 126/246 (51%), Gaps = 12/246 (4%) Query: 22 VIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELL 81 V+V D D+ +R + I R + E + ILG ++FY++ +S PRPETELL Sbjct: 43 VLVFQDQTSDEIRRHY-EELIARRSRGEPVAYILGRKEFYSLDFQVSPQVLIPRPETELL 101 Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTG--AVCLALLKESPFFKGVGVDISCKALEIAKS 139 V+ + S R +K+ DLGTG+G +C+AL + F + DIS +AL +A+S Sbjct: 102 VE-LVGNSYSRQQKKIFA---DLGTGSGILGICIAL--DFSLFLCLACDISKQALAVARS 155 Query: 140 NAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG 198 NA + VS+R + D + ++ D IV NPPYI L EVR+F+P +L Sbjct: 156 NARRHRVSDRILFFRGDMGAGIKPQSLDFIVCNPPYISVREFAGLEAEVRNFEPGQALLS 215 Query: 199 GIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258 G GL H + + +R L G +E+G Q V RIF + + ++D G DR Sbjct: 216 GERGLGHIKRLEQEAARLLRGSGRVFLEMGSTQADHVRRIFS--RWSSCHIYQDLAGLDR 273 Query: 259 VLLFCR 264 + C+ Sbjct: 274 AAVVCK 279 >gi|169824786|ref|YP_001692397.1| putative rRNA or tRNA methytransferase [Finegoldia magna ATCC 29328] gi|167831591|dbj|BAG08507.1| putative rRNA or tRNA methytransferase [Finegoldia magna ATCC 29328] Length = 263 Score = 111 bits (278), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 79/212 (37%), Positives = 119/212 (56%), Gaps = 11/212 (5%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110 I ILG++ FYN + S PR +TE+LVD + + R IL++G G+G Sbjct: 59 IEYILGFKYFYNRKFYTDSSVLIPRFDTEILVDEIIKIN------RKFENILEIGIGSGI 112 Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVT-NGVSERFDTLQSDWFSSVEGLFDVIV 169 + + L E K +GVDI+ KA+E++K NA + N + F + SD + +V FD+IV Sbjct: 113 ISITLNLELNS-KVLGVDINKKAIELSKKNAESLNATNVEF--IYSDLYENVNYKFDLIV 169 Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY 229 SNPPYI+ + L ++ +PR +L GG DGL YR I + S +LN+DG+ + EIGY Sbjct: 170 SNPPYIDKKDFNSLETKILK-EPRSALFGGDDGLYFYRKIINQASDYLNEDGMLAFEIGY 228 Query: 230 NQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 NQ+ + I + KD+ G DRV++ Sbjct: 229 NQRESIFEILDENGFENHYCIKDFNGFDRVII 260 >gi|163858861|ref|YP_001633159.1| heme biosynthesis protein [Bordetella petrii DSM 12804] gi|163262589|emb|CAP44892.1| heme biosynthesis protein [Bordetella petrii] Length = 275 Score = 111 bits (278), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 72/221 (32%), Positives = 110/221 (49%), Gaps = 13/221 (5%) Query: 43 VRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRIL 102 R L E + ++G R+F ++ D PRPETELLV++ALA+ + R +L Sbjct: 59 TRRLAGEPMAYLVGHREFMGHDFAVTPDVLIPRPETELLVETALAW----LADRPEAAVL 114 Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV- 161 DLGTG+G + +++ +P D S AL++A NA G R D Q W+ ++ Sbjct: 115 DLGTGSGVIAVSIALGAPRAAVTATDASAAALQVAVRNAARLGA--RVDFAQGSWYDALP 172 Query: 162 -EGLFDVIVSNPPYIESVIVDCLGLEVRD--FDPRISLDGGIDGLSHYRTIADGVSRHLN 218 +D+IVSNPPYI D L+ D F+PR +L G DGL I G + L Sbjct: 173 ARARYDLIVSNPPYIAR---DDQHLDQGDLRFEPRNALTDGADGLRDLAVIVAGAAARLR 229 Query: 219 KDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRV 259 G VE G++Q V ++ + + + +D G +R+ Sbjct: 230 PGGALWVEHGWDQAAAVRQLLAAAGFDQITSRRDLSGIERI 270 >gi|126441418|ref|YP_001060596.1| putative protein hemK [Burkholderia pseudomallei 668] gi|126452796|ref|YP_001067846.1| protein hemK [Burkholderia pseudomallei 1106a] gi|134283321|ref|ZP_01770022.1| HemK-like protein [Burkholderia pseudomallei 305] gi|167825995|ref|ZP_02457466.1| protein methyltransferase HemK [Burkholderia pseudomallei 9] gi|167847482|ref|ZP_02472990.1| protein methyltransferase HemK [Burkholderia pseudomallei B7210] gi|167896070|ref|ZP_02483472.1| protein methyltransferase HemK [Burkholderia pseudomallei 7894] gi|167904456|ref|ZP_02491661.1| protein methyltransferase HemK [Burkholderia pseudomallei NCTC 13177] gi|167912717|ref|ZP_02499808.1| protein methyltransferase HemK [Burkholderia pseudomallei 112] gi|167920677|ref|ZP_02507768.1| protein methyltransferase HemK [Burkholderia pseudomallei BCC215] gi|226198254|ref|ZP_03793825.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Burkholderia pseudomallei Pakistan 9] gi|237813981|ref|YP_002898432.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Burkholderia pseudomallei MSHR346] gi|242318052|ref|ZP_04817068.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Burkholderia pseudomallei 1106b] gi|254198427|ref|ZP_04904848.1| putative protein hemK [Burkholderia pseudomallei S13] gi|254300724|ref|ZP_04968169.1| protein Hemk [Burkholderia pseudomallei 406e] gi|126220911|gb|ABN84417.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Burkholderia pseudomallei 668] gi|126226438|gb|ABN89978.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Burkholderia pseudomallei 1106a] gi|134245516|gb|EBA45609.1| HemK-like protein [Burkholderia pseudomallei 305] gi|157810623|gb|EDO87793.1| protein Hemk [Burkholderia pseudomallei 406e] gi|169655167|gb|EDS87860.1| putative protein hemK [Burkholderia pseudomallei S13] gi|225929774|gb|EEH25790.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Burkholderia pseudomallei Pakistan 9] gi|237504345|gb|ACQ96663.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Burkholderia pseudomallei MSHR346] gi|242141291|gb|EES27693.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Burkholderia pseudomallei 1106b] Length = 285 Score = 111 bits (278), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 84/262 (32%), Positives = 128/262 (48%), Gaps = 15/262 (5%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L G S Q+I D LD R R E I ++ G R+F+ + Sbjct: 24 DARILLAHALGWSRTQLITRADEPLDAAARARYLALQARRAAGEPIAQLTGAREFFGLEF 83 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 ++ D PRPETELLV++AL I+ +LDLGTG+GA+ +++ E P + Sbjct: 84 DITPDVLIPRPETELLVETALDA----IDGIASPCVLDLGTGSGAIAVSIASERPDARVW 139 Query: 126 GVDISCKALEIAKSNA------VTNGVSERFDTLQSDWFSSVE-GL-FDVIVSNPPYIES 177 ++ S AL++A+ NA G RF L+SDW+++++ GL F V+VSNPPYI Sbjct: 140 ALERSVAALDVARRNARKLLDPARAGGPLRF--LESDWYAALDPGLRFHVVVSNPPYIAR 197 Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237 ++R F+PR +L DGL+ RTI G + G +E GY+Q V Sbjct: 198 HDPHLAEGDLR-FEPRGALTDENDGLAAIRTIVAGAHAFVAPGGALWLEHGYDQAAAVRA 256 Query: 238 IFESRKLFLVNAFKDYGGNDRV 259 + ++ V + D +R Sbjct: 257 LLDAAGFADVESRADLASIERA 278 >gi|53720683|ref|YP_109669.1| protein methyltransferase HemK [Burkholderia pseudomallei K96243] gi|76809364|ref|YP_334969.1| protein methyltransferase HemK [Burkholderia pseudomallei 1710b] gi|217424835|ref|ZP_03456332.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Burkholderia pseudomallei 576] gi|254190472|ref|ZP_04896980.1| putative HemK protein [Burkholderia pseudomallei Pasteur 52237] gi|254258481|ref|ZP_04949535.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Burkholderia pseudomallei 1710a] gi|52211097|emb|CAH37085.1| protein methyltransferase HemK [Burkholderia pseudomallei K96243] gi|76578817|gb|ABA48292.1| protein methyltransferase HemK [Burkholderia pseudomallei 1710b] gi|157938148|gb|EDO93818.1| putative HemK protein [Burkholderia pseudomallei Pasteur 52237] gi|217392291|gb|EEC32316.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Burkholderia pseudomallei 576] gi|254217170|gb|EET06554.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Burkholderia pseudomallei 1710a] Length = 285 Score = 111 bits (278), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 84/262 (32%), Positives = 128/262 (48%), Gaps = 15/262 (5%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L G S Q+I D LD R R E I ++ G R+F+ + Sbjct: 24 DARILLAHALGWSRTQLITRADEPLDAAARARYLALQARRAAGEPIAQLTGAREFFGLEF 83 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 ++ D PRPETELLV++AL I+ +LDLGTG+GA+ +++ E P + Sbjct: 84 DITPDVLIPRPETELLVETALDA----IDGIASPCVLDLGTGSGAIAVSIASERPDARVW 139 Query: 126 GVDISCKALEIAKSNA------VTNGVSERFDTLQSDWFSSVE-GL-FDVIVSNPPYIES 177 ++ S AL++A+ NA G RF L+SDW+++++ GL F V+VSNPPYI Sbjct: 140 ALERSVAALDVARRNARKLLDPARAGGPLRF--LESDWYAALDPGLRFHVVVSNPPYIAR 197 Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237 ++R F+PR +L DGL+ RTI G + G +E GY+Q V Sbjct: 198 HDPHLAEGDLR-FEPRGALTDENDGLAAIRTIVAGAHAFVAPGGALWLEHGYDQAAAVRT 256 Query: 238 IFESRKLFLVNAFKDYGGNDRV 259 + ++ V + D +R Sbjct: 257 LLDAAGFADVESRADLASIERA 278 >gi|325694523|gb|EGD36432.1| protein-(glutamine-N5) methyltransferase [Streptococcus sanguinis SK150] Length = 276 Score = 111 bits (278), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 75/218 (34%), Positives = 111/218 (50%), Gaps = 12/218 (5%) Query: 46 LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLG 105 L H+ I+G DF+ + L + PRPETE LV+ L+ + + +LD+G Sbjct: 63 LAHKPAQYIIGSSDFHGLTLKVDERVLIPRPETEELVELILSEN-----PESSLSVLDIG 117 Query: 106 TGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF 165 TG+GA+ LAL P ++ D+S AL +A NA + +S F +QSD ++ F Sbjct: 118 TGSGAIALALANSRPNWQITASDLSDDALALAAENAQSCNLSLTF--VQSDCLDAISVNF 175 Query: 166 DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225 D+IVSNPPYI D +GL V +P ++L D + YR IA +L + G + Sbjct: 176 DIIVSNPPYISEADKDEVGLNVLTSEPHMALFAEEDSYAVYRKIAGQAGDYLTEKGKIYL 235 Query: 226 EIGYNQKVDVVRIFESRKLF---LVNAFKDYGGNDRVL 260 EIGY Q V + +K F + KD G DR++ Sbjct: 236 EIGYKQGDGVRELL--KKSFPQKRIRVLKDQFGKDRMV 271 >gi|320528630|ref|ZP_08029783.1| protein-(glutamine-N5) methyltransferase [Solobacterium moorei F0204] gi|320130996|gb|EFW23573.1| protein-(glutamine-N5) methyltransferase [Solobacterium moorei F0204] Length = 284 Score = 111 bits (278), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 79/229 (34%), Positives = 115/229 (50%), Gaps = 22/229 (9%) Query: 44 RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEK----RDVV 99 R LK E + +LG+ FY ++ ++ D PR ETE L A L RI++ ++ V Sbjct: 62 RILKQEPMSHVLGYSWFYGYKMIVNEDVLIPRCETEELC----ALILSRIDEIFPTQETV 117 Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSD 156 D+GTG+GA+ + + KE K DIS +AL A+ NA N V F D LQ Sbjct: 118 ECADVGTGSGAIAITVAKEESRVKMHATDISEEALVTARQNAKNNEVDIDFTAGDMLQP- 176 Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216 DV++SNPPYI + + V DF+P ++L GG DGL YR I + Sbjct: 177 -LIDANRHLDVLISNPPYIPQD--EQMETSVVDFEPHVALFGGEDGLKFYRMIFKDCKKV 233 Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA----FKDYGGNDRVLL 261 LNK + E+G++Q+ + ++ E L +A KD G DR+L Sbjct: 234 LNKKAFMAFEMGWDQRERMSKLVEE---LLPDARYEMLKDMNGKDRMLF 279 >gi|212213423|ref|YP_002304359.1| peptide release factor-glutamine N5-methyltransferase [Coxiella burnetii CbuG_Q212] gi|212011833|gb|ACJ19214.1| peptide release factor-glutamine N5-methyltransferase [Coxiella burnetii CbuG_Q212] Length = 277 Score = 111 bits (278), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 77/240 (32%), Positives = 125/240 (52%), Gaps = 9/240 (3%) Query: 26 PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85 P+ L+ Q+ L+ + R +K E I ILG ++F+++ L ++ D PRPETE+LV+ Sbjct: 45 PEIQLNSSQQKTLSAYVKRRVKGEPIAYILGQKEFWSLNLKVTPDVLIPRPETEMLVEWI 104 Query: 86 LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145 L +LP+ EK +RI DLGTG+GAV LA+ E P + D S AL+IA+ NA + Sbjct: 105 LK-NLPKDEK---LRIADLGTGSGAVALAIAVERPHWTIDATDNSQAALKIAEINAKQHE 160 Query: 146 VSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204 + + + +W ++ + IV NPPYI L+ +PR +L G DGLS Sbjct: 161 I-KNCNFYHGEWCQALPRRDYHAIVGNPPYIPD---KDQHLQQLKHEPREALAAGSDGLS 216 Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 + I +L G +E GY+Q ++ + ++ + +D G R+++ R Sbjct: 217 AIKIIIHEAKSYLVNGGRLLLEHGYDQAEKIMTLMQADGYREITDRRDLAGLSRMMVARR 276 >gi|71900252|ref|ZP_00682389.1| Modification methylase HemK [Xylella fastidiosa Ann-1] gi|71729965|gb|EAO32059.1| Modification methylase HemK [Xylella fastidiosa Ann-1] Length = 275 Score = 111 bits (278), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 72/207 (34%), Positives = 109/207 (52%), Gaps = 7/207 (3%) Query: 54 ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113 ++G R F+ + + +SS T PR ETE LV+ AL R++ R+ DLGTG+GA+ L Sbjct: 67 LIGRRGFWTLDVIVSSATLIPRAETETLVEQALQ----RLDHASERRVADLGTGSGAIAL 122 Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNP 172 A+ E P + + D S AL+IA NA +G++ + +W+ ++ G FD+IVSNP Sbjct: 123 AIACERPQAQVLATDNSAAALDIAARNASAHGLNHVV-FREGNWYEALLGERFDLIVSNP 181 Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232 PYI ++R F+P +L G DGL R +A G HL G +E G++Q Sbjct: 182 PYIAVTDPHLTQGDLR-FEPPSALISGGDGLDALRILAAGAPAHLRPGGWLVLEHGWDQG 240 Query: 233 VDVVRIFESRKLFLVNAFKDYGGNDRV 259 + + + L V +D DRV Sbjct: 241 AAMRTLLHTAGLVAVATVQDLEARDRV 267 >gi|83747501|ref|ZP_00944539.1| Peptide release factor-glutamine N5-methyltransferase [Ralstonia solanacearum UW551] gi|207744460|ref|YP_002260852.1| methylase of polypeptide chain release factors protein [Ralstonia solanacearum IPO1609] gi|83725815|gb|EAP72955.1| Peptide release factor-glutamine N5-methyltransferase [Ralstonia solanacearum UW551] gi|206595866|emb|CAQ62793.1| methylase of polypeptide chain release factors protein [Ralstonia solanacearum IPO1609] Length = 309 Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 91/260 (35%), Positives = 123/260 (47%), Gaps = 15/260 (5%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 ++ + VTGLS Q+I +D+ R L R L E + +LG R+F+ Sbjct: 45 EARMLVSHVTGLSRVQLITQDTYAIDNGVRMRLAELATRRLAGEPMAYLLGEREFFGRLF 104 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG--AVCLALLKESPFFK 123 ++ PRP+TELLV+ AL RIE RD +LDLGTG+G AV +AL + + Sbjct: 105 QVTPAVLIPRPDTELLVEQALD----RIEDRDAPDVLDLGTGSGIIAVTIALARRD--AR 158 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF-----SSVEGLFDVIVSNPPYIESV 178 D S AL +A NA T + L DW+ S FD+IVSNPPYI S Sbjct: 159 VWATDASADALAVAAGNAQTLDAANVHVAL-GDWYGALPESDAPPAFDLIVSNPPYIASA 217 Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238 ++R F+P +L DGL H RTI G L DG +E GY+Q V + Sbjct: 218 DAHLDQGDLR-FEPAGALTDHGDGLRHLRTIVAGAPARLAADGWLLLEHGYDQGPAVRAL 276 Query: 239 FESRKLFLVNAFKDYGGNDR 258 V +D G+DR Sbjct: 277 LAEAGFADVFTAQDLAGHDR 296 >gi|126172945|ref|YP_001049094.1| HemK family modification methylase [Shewanella baltica OS155] gi|125996150|gb|ABN60225.1| modification methylase, HemK family [Shewanella baltica OS155] Length = 282 Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 77/237 (32%), Positives = 119/237 (50%), Gaps = 8/237 (3%) Query: 26 PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85 P+ L Q + + K + I+G R+F+++ ++ T PRP+TE+LV++A Sbjct: 48 PEKSLTVEQWKRFQQMVQKRQKGVPVAHIVGEREFWSLPFIVNDTTLIPRPDTEILVETA 107 Query: 86 LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145 L L +LDLGTGTGA+ LAL E ++ VD A+ +A +N N Sbjct: 108 LNMPL-----STYANVLDLGTGTGAIALALASERESWQITAVDKVDDAVALAIANR-ENL 161 Query: 146 VSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204 + D LQSDWFS+V+ FD+IVSNPPYI+ +VR F+P+ +L +G + Sbjct: 162 KLPQVDILQSDWFSAVKSRDFDLIVSNPPYIDETDEHLHQGDVR-FEPQSALTAAEEGFA 220 Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 IA+ +L +G +E G+ Q V + V +D+G NDR + Sbjct: 221 DLYYIANTARDYLKPNGYILLEHGFEQAVRLRAKLIELGYENVATVRDFGSNDRCTM 277 >gi|332967821|gb|EGK06920.1| protein methyltransferase HemK [Kingella kingae ATCC 23330] Length = 269 Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 84/258 (32%), Positives = 116/258 (44%), Gaps = 11/258 (4%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 ++ L +TGLS Q+I L L R + E I +LG R+FY Sbjct: 17 ETRMLLQYITGLSRSQLITHDSETLSPEHESSLHALCQRREQGEPIAYLLGEREFYGRSF 76 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 T+S PRPETE L+++AL R+ R + D+GTG+G + ++ E Sbjct: 77 TVSPAVLIPRPETEHLLEAALC----RLPARGF--LWDMGTGSGIIAISAKLERTDANVF 130 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL--FDVIVSNPPYIESVIVDCL 183 DIS AL IA+ NA G + F Q WF FDVI SNPPYI S Sbjct: 131 ASDISPDALNIAQHNAQRLGAAVAF--AQGSWFDCAVSAHKFDVIASNPPYINSHDTHLQ 188 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 ++R F+P +L DGL+H R I +L G +E GY+Q + +F Sbjct: 189 QGDLR-FEPAHALTDFADGLAHIRHIVARAPDYLQPQGWLLLEHGYDQGAAIRDLFAQHG 247 Query: 244 LFLVNAFKDYGGNDRVLL 261 V +D G +RV L Sbjct: 248 YTQVETLRDLAGLERVTL 265 >gi|33599374|ref|NP_886934.1| heme biosynthesis protein [Bordetella bronchiseptica RB50] gi|33566970|emb|CAE30883.1| heme biosynthesis protein [Bordetella bronchiseptica RB50] Length = 251 Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 72/219 (32%), Positives = 111/219 (50%), Gaps = 9/219 (4%) Query: 43 VRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRIL 102 R L E + +LG R+F L+ D PRP+TELLV++AL + ++ R R+L Sbjct: 35 ARRLAGEPMAYLLGGREFMGHWFALTPDVLIPRPDTELLVETALHW----LQGRAAPRVL 90 Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162 DLGTG+GA+ +++ P + D+S AL +A+ NA G R L DW+ ++ Sbjct: 91 DLGTGSGAIAVSVALGCPQAEVTATDLSAAALAVAEGNAQRLGA--RVRCLAGDWYEALP 148 Query: 163 GL--FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220 +D+IVSNPPYI ++R F+PR +L DGL+ IA G L Sbjct: 149 AQDRYDLIVSNPPYIAREDAHLAQGDLR-FEPRGALTDENDGLAALARIAGGAPGRLLPG 207 Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRV 259 G +E G++Q + L V++ +D G +R+ Sbjct: 208 GAIWMEHGWDQAEAARALLRQAGLREVHSRRDLAGIERI 246 >gi|314937738|ref|ZP_07845060.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecium TX0133a04] gi|314942364|ref|ZP_07849211.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecium TX0133C] gi|314952117|ref|ZP_07855136.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecium TX0133A] gi|314992372|ref|ZP_07857804.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecium TX0133B] gi|314997441|ref|ZP_07862388.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecium TX0133a01] gi|313588450|gb|EFR67295.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecium TX0133a01] gi|313593097|gb|EFR71942.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecium TX0133B] gi|313595736|gb|EFR74581.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecium TX0133A] gi|313598877|gb|EFR77722.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecium TX0133C] gi|313642876|gb|EFS07456.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecium TX0133a04] Length = 279 Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 80/241 (33%), Positives = 126/241 (52%), Gaps = 20/241 (8%) Query: 27 DSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL 86 + + ++ QR T+ + H + +LG+ DFY+ RL ++ T PRPETE LV+ L Sbjct: 48 EEISEEEQRLIETDLRLLLADHPPQY-LLGYADFYDHRLKVTEATLIPRPETEELVEWCL 106 Query: 87 AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146 P + + ++D+GTGTGA+ ++L + VD+S +ALE+AK NA G Sbjct: 107 D-ETPGVP----LEVIDIGTGTGAIAISLKAARKNWHISAVDLSEEALEVAKENAQKEGT 161 Query: 147 SERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203 F DTL ++ FDVI+SNPPYI + + VR F+P+++L DGL Sbjct: 162 KISFYHGDTLGP----VMDQQFDVIISNPPYISRNEWELMDESVRSFEPKMALFAENDGL 217 Query: 204 SHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES----RKLFLVNAFKDYGGNDRV 259 + Y IA L +G +EIG+ Q V + F+ +K+ + KD GN+R+ Sbjct: 218 AIYEKIAVEAPSVLKSNGKIFLEIGFRQGEAVKKKFQQAFPDKKVAIK---KDLFGNERM 274 Query: 260 L 260 + Sbjct: 275 I 275 >gi|256848018|ref|ZP_05553462.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Lactobacillus coleohominis 101-4-CHN] gi|256715078|gb|EEU30055.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Lactobacillus coleohominis 101-4-CHN] Length = 282 Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 69/230 (30%), Positives = 120/230 (52%), Gaps = 7/230 (3%) Query: 11 LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70 L + G S +++ V+ D ++ AI+R K E ++G F+ ++ D Sbjct: 31 LKMIHGWSDADLLMHNREVMSDDEKKRYQTAILRIAKDEPTQYVVGKAPFFGRTFVVNQD 90 Query: 71 TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130 P ETE L++ + L + + +R+LDLGTG+G + + L E P ++ DIS Sbjct: 91 VLIPESETEDLIE----WVLQEMPQDQPLRVLDLGTGSGVIGITLSLECPRWRVTLSDIS 146 Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRD 189 AL +A +N +G + R T++SD F+ ++G FD+IV+NPPYI + + V Sbjct: 147 AGALRVATANQRLHGTNLR--TVESDLFTHLQGERFDLIVTNPPYISPNATELIDRAVIK 204 Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 ++P ++L +GL Y + D V HL + G+ E G++Q+ + R+F Sbjct: 205 YEPPLALFASENGLGFYHRLFDQVQDHLTEQGVLFGETGFDQEESIQRLF 254 >gi|33591872|ref|NP_879516.1| heme biosynthesis protein [Bordetella pertussis Tohama I] gi|33571516|emb|CAE40990.1| heme biosynthesis protein [Bordetella pertussis Tohama I] gi|332381289|gb|AEE66136.1| heme biosynthesis protein [Bordetella pertussis CS] Length = 270 Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 72/219 (32%), Positives = 111/219 (50%), Gaps = 9/219 (4%) Query: 43 VRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRIL 102 R L E + +LG R+F L+ D PRP+TELLV++AL + ++ R R+L Sbjct: 54 ARRLAGEPMAYLLGGREFMGHWYALTPDVLIPRPDTELLVETALHW----LQGRAAPRVL 109 Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162 DLGTG+GA+ +++ P + D+S AL +A+ NA G R L DW+ ++ Sbjct: 110 DLGTGSGAIAVSVALGCPQAEVTATDLSAAALAVAEGNAQRLGA--RVRCLAGDWYEALP 167 Query: 163 GL--FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220 +D+IVSNPPYI ++R F+PR +L DGL+ IA G L Sbjct: 168 AQDRYDLIVSNPPYIAREDAHLAQGDLR-FEPRGALTDENDGLAALARIAGGAPGRLLPG 226 Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRV 259 G +E G++Q + L V++ +D G +R+ Sbjct: 227 GAIWMEHGWDQAEAARALLRQAGLREVHSRRDLAGIERI 265 >gi|190572887|ref|YP_001970732.1| HemK protein, putative protoporphyrinogen oxidase [Stenotrophomonas maltophilia K279a] gi|190010809|emb|CAQ44418.1| HemK protein, putative protoporphyrinogen oxidase [Stenotrophomonas maltophilia K279a] Length = 285 Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 80/227 (35%), Positives = 116/227 (51%), Gaps = 11/227 (4%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101 + R + E + + G R F+ + L + T PRPETELLV+ +L R+ +++ Sbjct: 64 LARRVAGEPVAYLTGRRGFWTLDLEVDPATLIPRPETELLVE----LALERLPPDQSLQL 119 Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSS 160 DLGTG+GA+ LAL E P + + D S AL +A NA + + RF DW++ Sbjct: 120 ADLGTGSGAIALALASERPQAQVLATDASPGALAVAARNAARHDLRNVRFAEGGHDWYAP 179 Query: 161 VEGL-FDVIVSNPPYIESVIVDCLGLEVRD--FDPRISLDGGIDGLSHYRTIADGVSRHL 217 ++G FD+I SNPPYI S D LE D F+P +L G DGL R I DG HL Sbjct: 180 LQGARFDLIASNPPYIAS---DDPHLERGDLRFEPATALASGPDGLDDIRRIVDGGQAHL 236 Query: 218 NKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 G +E G++Q + +F++ V +D DR+ L R Sbjct: 237 LPGGWLLIEHGWDQGEAIRALFDAAGFAEVQTVQDLEQRDRITLGRR 283 >gi|167564256|ref|ZP_02357172.1| protein hemK [Burkholderia oklahomensis EO147] Length = 288 Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 82/262 (31%), Positives = 125/262 (47%), Gaps = 15/262 (5%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDR--QRFFLTNAIVRSLKHESIHRILGWRDFYNV 63 D+ L G + Q+I D LD +R+ A R E + ++ G R+F+ + Sbjct: 27 DARILLAHALGWTRTQLITRADEPLDAAAVERYLALEA--RRAAGEPVAQLTGAREFFGL 84 Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 ++ D PRPETELLV++AL I+ +LDLGTG+GA+ +++ E P + Sbjct: 85 EFEITPDVLIPRPETELLVETALDA----IDGIASPCVLDLGTGSGAIAVSIASERPDAR 140 Query: 124 GVGVDISCKALEIAKSNAVTNGVSER----FDTLQSDWFSSVEG--LFDVIVSNPPYIES 177 +D S AL++A+ NA R L+SDW+++++ F VIVSNPPYI Sbjct: 141 VWALDRSAAALDVARRNARKLLAPARPGGPLQFLESDWYAALDSGRRFHVIVSNPPYIAR 200 Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237 ++R F+PR +L DGL+ R I G L G +E GY+Q V Sbjct: 201 HDPHLAEGDLR-FEPRGALTDDDDGLAAIRAIVAGAHAFLAPGGALWIEHGYDQAAAVRA 259 Query: 238 IFESRKLFLVNAFKDYGGNDRV 259 E+ V + D +R Sbjct: 260 RLEAAGFADVESLADLASIERA 281 >gi|21910336|ref|NP_664604.1| putative protoporphyrinogen oxidase [Streptococcus pyogenes MGAS315] gi|28895911|ref|NP_802261.1| protoporphyrinogen oxidase [Streptococcus pyogenes SSI-1] gi|21904532|gb|AAM79407.1| putative protoporphyrinogen oxidase [Streptococcus pyogenes MGAS315] gi|28811161|dbj|BAC64094.1| putative protoporphyrinogen oxidase [Streptococcus pyogenes SSI-1] Length = 279 Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 69/185 (37%), Positives = 102/185 (55%), Gaps = 7/185 (3%) Query: 47 KHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGT 106 +H S I G F +++L + PRPETE LVD LA +L + +LD+GT Sbjct: 64 QHLSPQYITGNAYFRDLKLAVDKRVLIPRPETEELVDMILAENLDA-----PLNVLDIGT 118 Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFD 166 G+GA+ ++L KE ++ DIS AL++AK+NA + F ++SD FS + G FD Sbjct: 119 GSGAIAISLKKERSNWQVTASDISRAALDLAKANADAYQLDITF--IESDVFSLISGTFD 176 Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE 226 +IVSNPPYI + + L V +P ++L +G + YR I + +L K+G E Sbjct: 177 IIVSNPPYISYEDKEEVSLNVLQSEPHLALFAKENGYAIYRKIIEQADNYLAKEGKLYFE 236 Query: 227 IGYNQ 231 IGY Q Sbjct: 237 IGYKQ 241 >gi|114330835|ref|YP_747057.1| modification methylase, HemK family protein [Nitrosomonas eutropha C91] gi|114307849|gb|ABI59092.1| [protein release factor]-glutamine N5-methyltransferase [Nitrosomonas eutropha C91] Length = 293 Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 82/257 (31%), Positives = 123/257 (47%), Gaps = 11/257 (4%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L V + + +I + +L Q + R + E + + G R FY++ Sbjct: 35 DARWLLQSVLNVDAAFLITHAELLLGMEQIVHFQQLLARRMAGEPVAYLTGERGFYDLVF 94 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 ++ D PRPETELLV+ AL+ +I ILDLGTG+GA+ + + + P Sbjct: 95 DVTPDVLIPRPETELLVEMALS----KIPPDRCCNILDLGTGSGAIAITIARHRPDIYVT 150 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS-VEGLFDVIVSNPPYIES--VIVDC 182 VD+S AL +A+ NA V E +++DWFS + FDVIV+NPPYI ++ Sbjct: 151 AVDLSPLALAVARRNAKRCSV-ENVVFIKADWFSGFISEKFDVIVANPPYIVEGDPHLEA 209 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 GL F+P I+L +GL R I D +L G +E GY+Q R+ + Sbjct: 210 DGLR---FEPTIALVAQNNGLDCIRRIVDQAPDYLEHSGWLMLEHGYDQADVCRRLLDKT 266 Query: 243 KLFLVNAFKDYGGNDRV 259 + D G DRV Sbjct: 267 GFSHIFTRSDLAGIDRV 283 >gi|315641824|ref|ZP_07896828.1| protein-(glutamine-N5) methyltransferase [Enterococcus italicus DSM 15952] gi|315482499|gb|EFU73038.1| protein-(glutamine-N5) methyltransferase [Enterococcus italicus DSM 15952] Length = 277 Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 73/212 (34%), Positives = 107/212 (50%), Gaps = 13/212 (6%) Query: 54 ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113 + G F+ +S T PRPETE LVD L + + + ++D+GTGTGA+ + Sbjct: 73 LTGQEAFFGRTFVVSDATLIPRPETEELVDQCL-----KHVQSEACHVVDIGTGTGAIAV 127 Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVS 170 L E P ++ VD+S +AL IA+ NA G F DTL +DVI+S Sbjct: 128 TLKAERPLWQVAAVDLSSEALVIAQKNAKRIGSEVTFYHGDTL----VPVKNQTWDVIIS 183 Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230 NPPYI S + VR F+P+++L GL+ Y+ IA L ++G +EIGY Sbjct: 184 NPPYISSDEWSIMDASVRQFEPKMALFADDQGLAMYKKIASQAQSCLAENGWLFLEIGYR 243 Query: 231 QKVDVVRIFESR-KLFLVNAFKDYGGNDRVLL 261 Q V +IF++ V KD G R+++ Sbjct: 244 QGPAVQQIFQAAFPQKEVQVKKDLFGQPRMVI 275 >gi|33595094|ref|NP_882737.1| heme biosynthesis protein [Bordetella parapertussis 12822] gi|33565171|emb|CAE35967.1| heme biosynthesis protein [Bordetella parapertussis] Length = 270 Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 72/219 (32%), Positives = 111/219 (50%), Gaps = 9/219 (4%) Query: 43 VRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRIL 102 R L E + +LG R+F L+ D PRP+TELLV++AL + ++ R R+L Sbjct: 54 ARRLAGEPMAYLLGGREFMGHWFALTPDVLIPRPDTELLVETALHW----LQGRVAPRVL 109 Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162 DLGTG+GA+ +++ P + D+S AL +A+ NA G R L DW+ ++ Sbjct: 110 DLGTGSGAIAVSVALGCPQAQVTATDLSAAALAVAEGNAQRLGA--RVRCLAGDWYEALP 167 Query: 163 GL--FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220 +D+IVSNPPYI ++R F+PR +L DGL+ IA G L Sbjct: 168 AQDRYDLIVSNPPYIAREDAHLAQGDLR-FEPRGALTDENDGLAALARIAGGAPGRLLPG 226 Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRV 259 G +E G++Q + L V++ +D G +R+ Sbjct: 227 GAIWMEHGWDQAEAARALLRQAGLREVHSRRDLAGIERI 265 >gi|149918412|ref|ZP_01906902.1| Modification methylase HemK [Plesiocystis pacifica SIR-1] gi|149820712|gb|EDM80122.1| Modification methylase HemK [Plesiocystis pacifica SIR-1] Length = 304 Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 86/266 (32%), Positives = 126/266 (47%), Gaps = 9/266 (3%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L + S + + +LD+ QR + R L E + I G R F+ + L Sbjct: 35 DAEHLLAQALDCSRMDLYLRHAELLDEAQRAPFRELVRRRLSREPVAYIEGARGFHALDL 94 Query: 66 TLSSD--TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 L+ D PRPETE LVD L R ++ +LD+GTG+GA+ LA+ K Sbjct: 95 ELAVDRRVLIPRPETEHLVDWLLEDL--REPPAPLMDVLDVGTGSGAIALAVAKARYEVT 152 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVIV 180 VD S AL++A+ NA +G+ ER +++ VE G + I +N PYI + Sbjct: 153 VTAVDASTDALDVARQNAERHGLGERVRLRRANLLDGVEDPPGGWTAIAANLPYIPAADW 212 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS--RHLNKDGLCSVEIGYNQKVDVVRI 238 L EVRDF+PR +L GG DGL R + V+ R L G +EIG Q +V + Sbjct: 213 AQLAPEVRDFEPRGALVGGDDGLDLVRRLITQVAERRALAPGGGLYLEIGVGQAAEVEAL 272 Query: 239 FESRKLFLVNAFKDYGGNDRVLLFCR 264 + V + DY R++ R Sbjct: 273 LRAAGFVGVASRDDYAKIPRIVAGYR 298 >gi|308071168|ref|YP_003872773.1| HemK-like protein [Paenibacillus polymyxa E681] gi|305860447|gb|ADM72235.1| HemK-like protein [Paenibacillus polymyxa E681] Length = 299 Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 72/201 (35%), Positives = 103/201 (51%), Gaps = 4/201 (1%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101 I R E I+G ++FY +S PRPETELLV++ L R+ + Sbjct: 77 IARKAAGEPAQYIIGRQEFYGRPFMVSPSVLIPRPETELLVEAILQHG-DRLWPSGAPQA 135 Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 LD+G G+GA+ + L E P ++ DIS AL++A NA NG + F + D + Sbjct: 136 LDIGAGSGAIAVTLAAERPSWRVAAGDISAAALKVAAHNAAANGAAVEFR--EGDLLAPF 193 Query: 162 EGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220 G D++VSNPPYI + + L EVRD +PR++LDGG DGL YR + + + Sbjct: 194 AGTRVDILVSNPPYIPAADIAGLQPEVRDHEPRMALDGGPDGLGPYRAMLEQLGLLQAPP 253 Query: 221 GLCSVEIGYNQKVDVVRIFES 241 L E+G Q DV + E Sbjct: 254 RLIGFELGMGQARDVAGLLEQ 274 >gi|78189388|ref|YP_379726.1| modification methylase HemK [Chlorobium chlorochromatii CaD3] gi|78171587|gb|ABB28683.1| Modification methylase HemK [Chlorobium chlorochromatii CaD3] Length = 297 Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 72/223 (32%), Positives = 111/223 (49%), Gaps = 8/223 (3%) Query: 44 RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103 + L+ + I G + FY + PRPETELLV+ AL S +V +LD Sbjct: 69 QRLQGRPVQYITGEQYFYGAPFFVDERVLIPRPETELLVERALEVSGVSALAGEVA-VLD 127 Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-- 161 +GTG+G + + L +P + V VD+S AL++A+ NA +GV+ R +Q+D S Sbjct: 128 VGTGSGCIAVTLATLAPNLRIVAVDLSPAALDVARLNAERHGVTNRMTFVQADMTSPYFA 187 Query: 162 ----EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217 + +I+SNPPYI L EVRDF+P ++L G+ Y+ + L Sbjct: 188 QQLPFATYQLIISNPPYIPKAEWATLEREVRDFEPELALTTP-SGMECYQALISAAPTLL 246 Query: 218 NKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 G ++E+ + V + ES L V KDYGG +R++ Sbjct: 247 ADGGTLALELHADGARAVATMLESAGLQEVALMKDYGGFERII 289 >gi|78778709|ref|YP_396821.1| HemK family modification methylase [Prochlorococcus marinus str. MIT 9312] gi|78712208|gb|ABB49385.1| modification methylase, HemK family [Prochlorococcus marinus str. MIT 9312] Length = 289 Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 69/205 (33%), Positives = 105/205 (51%), Gaps = 9/205 (4%) Query: 57 WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116 WRD ++L +++ PRPETEL+VD + F++ + R + +LGTG+GA+ +AL Sbjct: 84 WRD---LKLKVTNKVLIPRPETELIVD--IVFNIFGKQSRKLF-FAELGTGSGAISIALA 137 Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPP 173 P G+ DI ALEIA +N + + W++ +E G D+ +SNPP Sbjct: 138 LAYPLCNGIATDIDQDALEIAINNYMNSSKQSNLKFYCGHWWTPLESFKGKLDLAISNPP 197 Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233 YI + L EV++F+PRI+L GG DGL H R I L + G +E ++Q Sbjct: 198 YIPKDTYEKLPKEVKNFEPRIALLGGEDGLQHIREIIQKAPIFLKEKGWLILENHFDQGE 257 Query: 234 DVVRIFESRKLFLVNAFKDYGGNDR 258 V ++F K + D G R Sbjct: 258 KVKQLFIKNKFTSIEIVNDLSGIGR 282 >gi|187932826|ref|YP_001884695.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Clostridium botulinum B str. Eklund 17B] gi|187720979|gb|ACD22200.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Clostridium botulinum B str. Eklund 17B] Length = 287 Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 78/267 (29%), Positives = 126/267 (47%), Gaps = 23/267 (8%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L +V +I + +D I + + + IL +F N+ Sbjct: 28 DAELLLGKVLNKEKIYLITHREEKIDKTNEEKYMELINKRKEKMPVKYILNECEFMNINF 87 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 + PR +TE+LV+ L I++ D +I DL G+GA+ +AL + K + Sbjct: 88 YVEPGVLIPRADTEILVEEVLK----HIDENDSKKICDLCCGSGAIGIAL---ANLRKNI 140 Query: 126 GVDI--------SCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPY 174 VD+ + I KSN + +R ++SD + +D+IVSNPPY Sbjct: 141 NVDLIDYYETPEKVTLINIEKSN-----ILDRASFMKSDLLNKSINDAKRYDIIVSNPPY 195 Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234 IE ++ L +V++++P +L GG DGL Y+ I + LNK+G+ + EIGYNQ D Sbjct: 196 IEECEINDLMEDVKNYEPHTALSGGKDGLDFYKRIINESINVLNKNGILAFEIGYNQGTD 255 Query: 235 VVRIFESRKLFLVNAFKDYGGNDRVLL 261 V + E + V KD G DRV++ Sbjct: 256 VKELMEEKNFIEVKIVKDLAGLDRVVI 282 >gi|326318377|ref|YP_004236049.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Acidovorax avenae subsp. avenae ATCC 19860] gi|323375213|gb|ADX47482.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Acidovorax avenae subsp. avenae ATCC 19860] Length = 311 Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 74/217 (34%), Positives = 106/217 (48%), Gaps = 10/217 (4%) Query: 43 VRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRIL 102 R E + + G ++FY + L + + +PRP+TE LVD AL ++ R+ Sbjct: 70 ARRQAGEPVAYLTGRKEFYGLPLQVDARVLDPRPDTETLVDWALEV----LQPLPAPRVA 125 Query: 103 DLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 DLGTG+GA+ LAL P + V VD S AL +A++NA + D +++ W + Sbjct: 126 DLGTGSGAIALALRHGLPGAQVVLAVDASADALAVARANA--QRLHLPVDFVRTSWLDGI 183 Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221 G FD +VSNPPYIE D L +PR +L G DGL RTI + L G Sbjct: 184 SGPFDAVVSNPPYIEE---DDPHLAALVHEPRQALASGPDGLDDIRTIVVQSASRLAPGG 240 Query: 222 LCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258 +E G+NQ V + S V + D G+ R Sbjct: 241 WLLLEHGWNQAQAVQALLRSAGYAEVQSRADLAGHAR 277 >gi|85709576|ref|ZP_01040641.1| protein chain release factors methylase subunit [Erythrobacter sp. NAP1] gi|85688286|gb|EAQ28290.1| protein chain release factors methylase subunit [Erythrobacter sp. NAP1] Length = 274 Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 79/234 (33%), Positives = 118/234 (50%), Gaps = 14/234 (5%) Query: 30 LDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFS 89 + D + + + R HE + I G ++FY +S PR ++E L+D+ L S Sbjct: 45 MSDAEPEGFASLVERRAAHEPVAHITGTQEFYGREFAVSPHVLIPRGDSETLIDTVLE-S 103 Query: 90 LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG-VSE 148 P + R+LDLGTG+GA+ + L E G+G+D S ALE+A+SNA G + Sbjct: 104 AP-----NAKRVLDLGTGSGALLITTLLELEGASGLGIDASEPALELARSNAQALGLIGS 158 Query: 149 RFDTLQSDWFSSVE----GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204 R L+ DW G FD+IV NPPY+E L +VRD++P +L G +GL Sbjct: 159 RARFLRRDWHEEGWDDDLGTFDLIVCNPPYVEEDAE--LDADVRDYEPASALFAGPEGLD 216 Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258 YR I + + L+ +G+ +EIG +Q V +I + F V KD R Sbjct: 217 DYRVIIPQLRKLLSAEGMAVLEIGASQGEAVSKIA-TEHGFCVKILKDLANRPR 269 >gi|153809901|ref|ZP_01962569.1| hypothetical protein RUMOBE_00282 [Ruminococcus obeum ATCC 29174] gi|149834079|gb|EDM89159.1| hypothetical protein RUMOBE_00282 [Ruminococcus obeum ATCC 29174] Length = 300 Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 80/245 (32%), Positives = 124/245 (50%), Gaps = 21/245 (8%) Query: 27 DSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL 86 D+ ++R R T + +H + I G F + PR +TE+LV+ A+ Sbjct: 55 DAKTEERYRTLCT----KRAQHIPLQHITGRAYFMGYEFCVDERVLVPRQDTEVLVEEAI 110 Query: 87 AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146 + R+ + +ILD+ TG+G + L+LL E P G GVD+S AL +AK N G+ Sbjct: 111 S----RMRNLEKPQILDMCTGSGCILLSLLLELPQALGTGVDVSEGALCVAKENRKRLGL 166 Query: 147 SERFDTLQSDWFSS-----------VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195 +R + +QSD FS+ +E +D+++SNPPYI + ++ L EVR DP ++ Sbjct: 167 EQRAELIQSDLFSADYFRKNSGNDHME--YDMLISNPPYIRTEDIEGLMEEVRFHDPVLA 224 Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGG 255 LDG +GL Y I + +L G EIG +Q +DV I + + KD G Sbjct: 225 LDGKENGLYFYEKITEQAGTYLKPGGWLMYEIGCDQGMDVSEIMKKNGFEQIEIKKDLAG 284 Query: 256 NDRVL 260 DRV+ Sbjct: 285 LDRVV 289 >gi|56476055|ref|YP_157644.1| protein-glutamine N-methyltransferase [Aromatoleum aromaticum EbN1] gi|56312098|emb|CAI06743.1| Protein-glutamine N-methyltransferase [Aromatoleum aromaticum EbN1] Length = 280 Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 82/258 (31%), Positives = 128/258 (49%), Gaps = 8/258 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A+ D+ L V S+ ++ P++ L+ + + + R E + + G R+F+ Sbjct: 22 AVVDARILLRHVLQCSAARLAAYPEARLEAPEWAEFRSLVERREAGEPVAYLTGEREFFG 81 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 ++ PRP+TELLV+ ALA + R+LDLGTG+GA+ ++L E P Sbjct: 82 HPFIVTPAVLIPRPDTELLVELALA----HFGDKPHTRVLDLGTGSGALAISLALELPQA 137 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVD 181 V VD S +AL +A +NA S F + DWFSS+ + + +IV+NPPYI + Sbjct: 138 DVVAVDRSREALWVAMANAARLRASISF--VLGDWFSSLGDDHYQLIVANPPYIAAADPH 195 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P +L G DGL IA RHL G +E G++Q V + Sbjct: 196 LDEGDVR-FEPSTALVAGPDGLDDLAAIAAQAPRHLEPGGWLFMEHGFDQAAAVRGLLTD 254 Query: 242 RKLFLVNAFKDYGGNDRV 259 + ++KD G +RV Sbjct: 255 GGFSSIASWKDLAGIERV 272 >gi|166366578|ref|YP_001658851.1| N(5)-glutamine methyltransferase [Microcystis aeruginosa NIES-843] gi|166088951|dbj|BAG03659.1| N(5)-glutamine methyltransferase [Microcystis aeruginosa NIES-843] Length = 294 Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 74/215 (34%), Positives = 111/215 (51%), Gaps = 17/215 (7%) Query: 57 WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116 WR+F L +S + PRPETELL+D + D +DLGTG+GA+ + L Sbjct: 89 WRNF---TLKVSPEVLIPRPETELLID----IVGETVRGDDGGIWVDLGTGSGAIAIGLA 141 Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPP 173 + +D S AL IAK N + G ++R Q W++ +E G ++SNPP Sbjct: 142 SILTKAEIYAIDYSQTALAIAKENIINTGFADRIILKQGSWWTPLEKWQGQISGMLSNPP 201 Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233 YI S + L +EVR+ +PR++LDGG DGL+ R + +L GL VE+ Q Sbjct: 202 YIPSAEILDLQIEVREHEPRLALDGGEDGLTALRYLVATAPDYLRSGGLWLVEMRAGQGE 261 Query: 234 DVVRIFES----RKLFLVNAFKDYGGNDRVLLFCR 264 V ++ E+ R++ ++N D G DR +L R Sbjct: 262 KVAQMLENQGNYRQIQIIN---DLAGFDRFVLAER 293 >gi|145220120|ref|YP_001130829.1| HemK family modification methylase [Prosthecochloris vibrioformis DSM 265] gi|145206284|gb|ABP37327.1| modification methylase, HemK family [Chlorobium phaeovibrioides DSM 265] Length = 294 Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 68/223 (30%), Positives = 110/223 (49%), Gaps = 11/223 (4%) Query: 44 RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103 + L+ + I G + FY ++ + PRPETELLV+ AL F +E R++D Sbjct: 71 QRLEGRPVQYIAGEQFFYGLQFHVDERVLIPRPETELLVEHALGF----LENTQSARVMD 126 Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS--- 160 +GTG+G + + + + +D S +AL +A+ NA+ + V +R ++D F Sbjct: 127 IGTGSGCIAVTMALRNASLVLDALDCSVEALAVARGNALAHKVQDRVRFHEADIFRDSFT 186 Query: 161 ---VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217 G + +IVSNPPYI + L EVR+++PR++L G+ YR IA L Sbjct: 187 APFSAGTYSLIVSNPPYIPDAEWELLQREVREYEPRLALTTPT-GMECYRAIAGHAGELL 245 Query: 218 NKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 +G+ E+ V I +S + KDY G DR++ Sbjct: 246 KPEGVLCFEVHAEGAAAVGAIMDSSGFSAITVTKDYSGLDRIV 288 >gi|170078207|ref|YP_001734845.1| methyltransferase, methylase of peptide chain release factors [Synechococcus sp. PCC 7002] gi|169885876|gb|ACA99589.1| methyltransferase, methylase of peptide chain release factors [Synechococcus sp. PCC 7002] Length = 291 Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 70/208 (33%), Positives = 103/208 (49%), Gaps = 15/208 (7%) Query: 57 WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV--RILDLGTGTGAVCLA 114 WR+F L +S PRPETE L+D A A RD+ +DLGTG+GA+ L Sbjct: 86 WRNF---ELVVSPAVLIPRPETEYLIDLAQA------SHRDLHAGHWIDLGTGSGAIALG 136 Query: 115 LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSN 171 L P K VD S ALE+A+ NA+ G +R +W+ ++ G +VSN Sbjct: 137 LADSFPNGKIHAVDQSAAALEVARKNAIAYGSQDRIQFYHGNWWEPLQHLRGQVTGMVSN 196 Query: 172 PPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231 PPYI + ++ L EV +P +LDGG+DGL+ R + + +L G+ VE+ Q Sbjct: 197 PPYIPAALLPDLQPEVYRHEPHSALDGGMDGLADLRILVNEAPDYLISGGIWLVELMRGQ 256 Query: 232 KVDVVRIFESRKLFL-VNAFKDYGGNDR 258 V ++ + + D+ G DR Sbjct: 257 GETVAQLLADNGHYTQIQIIHDFAGGDR 284 >gi|88807795|ref|ZP_01123306.1| hypothetical protein WH7805_06531 [Synechococcus sp. WH 7805] gi|88787834|gb|EAR18990.1| hypothetical protein WH7805_06531 [Synechococcus sp. WH 7805] Length = 299 Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 76/228 (33%), Positives = 112/228 (49%), Gaps = 15/228 (6%) Query: 47 KHESIHRILG---WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR--- 100 +H + ++G WRD V L +S+ PR ETELL+D LA + D + Sbjct: 73 EHVPLQHLVGRCPWRD---VELQVSAAALIPRQETELLID--LALQCLKHSDSDALPQAG 127 Query: 101 -ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 DLGTG+GA+ +AL + P ++G VD+S +AL++A+ N + S + Q W+ Sbjct: 128 FWADLGTGSGAIAVALARSLPRWEGHAVDLSAEALDLARVNLRSLAPSNGWTLHQGSWWE 187 Query: 160 SVE---GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216 + G+ +++SNPPYI + L VRD +P ++L GG DGL R I D R Sbjct: 188 PLRHLWGMLHLVLSNPPYIPRTQLHGLDPVVRDHEPHLALSGGDDGLDCLRAIIDKAPRA 247 Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 L G VE ++Q DV+ + L A D G R L R Sbjct: 248 LAPGGWLLVEHHHDQSDDVLMLMRDAGLDAPQARPDLQGVMRFALAQR 295 >gi|171057270|ref|YP_001789619.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Leptothrix cholodnii SP-6] gi|170774715|gb|ACB32854.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Leptothrix cholodnii SP-6] Length = 280 Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 84/259 (32%), Positives = 128/259 (49%), Gaps = 16/259 (6%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L V GLS ++ + D VL Q + R L E + + G +F+ + L Sbjct: 24 DAQLLLGHVCGLSRTGLLTNDDQVLPAAQLARWQQLLARRLAGEPVAYLTGRHEFHGLTL 83 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 ++SD +PRP+TE LVD L L R+ + R+LDLGTG+GA+ LA+ P + Sbjct: 84 HITSDVLDPRPDTETLVDWGLEL-LARLGR--PARVLDLGTGSGAIALAIKHRCPSAQVS 140 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLG 184 VD S AL +A++N ++ D +WF ++ G FD+I+SNPPYI D Sbjct: 141 AVDFSAAALAVARANGAR--LNLDVDWQPGNWFENLAGQRFDLILSNPPYIAE---DDPH 195 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES--- 241 + +PR +L G DGL R++ +HL G +E G++Q V V + S Sbjct: 196 MPALRHEPRQALVSGADGLDDIRSLVRQAPQHLVAGGWLLLEHGHDQGVAVQDLLRSTGY 255 Query: 242 ----RKLFLVNAFKDYGGN 256 R+L L + + GG Sbjct: 256 REVDRRLDLADHVRCSGGQ 274 >gi|88810846|ref|ZP_01126103.1| HemK protein [Nitrococcus mobilis Nb-231] gi|88792476|gb|EAR23586.1| HemK protein [Nitrococcus mobilis Nb-231] Length = 283 Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 77/219 (35%), Positives = 114/219 (52%), Gaps = 7/219 (3%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101 + R + + G R+F+++ L ++ T PRPETE LV+ ALA SL I + V Sbjct: 64 VARRASGYPVAYLTGIREFWSLELRVTPATLIPRPETEGLVEVALA-SLTGITQPMV--- 119 Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 LDLGTG+GAV LA+ E P V VD +AL +A+ NA G+ +R L DW Sbjct: 120 LDLGTGSGAVGLAIATERPDATVVAVDTCPRALAVARCNARRLGL-QRVQFLLGDWLEPA 178 Query: 162 -EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220 E F +IV+NPPY++ + +R F+P +L GL+ R I G +L+ Sbjct: 179 GERRFHLIVANPPYVDPAEPELRCASLR-FEPPTALLAPEQGLAELRRIVSGALTNLHHG 237 Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRV 259 G+ +VE GY Q V +F++ ++ D G+ RV Sbjct: 238 GVLAVEHGYRQGAAVRTLFQTAGFEEIHTELDLQGHPRV 276 >gi|332290277|ref|YP_004421129.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Gallibacterium anatis UMN179] gi|330433173|gb|AEC18232.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Gallibacterium anatis UMN179] Length = 293 Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 89/259 (34%), Positives = 138/259 (53%), Gaps = 8/259 (3%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+++ LC VT S Q++ ++ L + Q+ L + R L+ E I ILG + F+++ L Sbjct: 31 DANALLCFVTEKSKAQIMAFAETRLSEAQQQRLELLLQRRLQGEPIAYILGEKGFWSLDL 90 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL----KESPF 121 +S T PR +TE LV++AL+ L + ILDLGTGTGA+ LAL ++ Sbjct: 91 LVSPVTLIPRSDTECLVETALSL-LQHYSNEAALSILDLGTGTGAIALALAAELTQQKRD 149 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIV 180 ++ +GVD +++ +AK N N ++ + +QSDWFSS+ FD+IVSNPPYI Sbjct: 150 YRIIGVDRVAESVLLAKQNEQRNHLT-NVEFMQSDWFSSLPPQKFDLIVSNPPYIAENDP 208 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 +VR F+P +L +GL+ I + + + G +E G+ Q V +F+ Sbjct: 209 HLKQGDVR-FEPLSALVAKKEGLADIERIIEQATTFMKTGGYLLIEHGWQQAEAVQALFK 267 Query: 241 SRKLFLVNAFKDYGGNDRV 259 V DYGGN RV Sbjct: 268 RYNWCAVRTVLDYGGNQRV 286 >gi|194290878|ref|YP_002006785.1| n5-glutamine methyltransferase, modifies release factors rf-1 and rf-2 [Cupriavidus taiwanensis LMG 19424] gi|193224713|emb|CAQ70724.1| N5-glutamine methyltransferase, modifies release factors RF-1 and RF-2 [Cupriavidus taiwanensis LMG 19424] Length = 298 Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 84/255 (32%), Positives = 126/255 (49%), Gaps = 8/255 (3%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 ++ L VTGLS Q+I VL QR L + R L E + ++G R+F+ + Sbjct: 32 EARMLLTHVTGLSRTQLITRDTDVLTIAQRDALATLLARRLAGEPMAYLIGEREFFGRKF 91 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 ++ D PRP+TE+ ++ALA P +LDLGTG+G + + L +E + Sbjct: 92 RVTPDVLIPRPDTEVAAEAALARLAPVPHP----NVLDLGTGSGILAVTLARERRDARVW 147 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCL 183 DIS AL +A+ NA G +E + L SDW+S++ F +IVSNPPYI + Sbjct: 148 ATDISPGALMVAQDNARALG-AEHIEFLVSDWYSALPPDLRFHLIVSNPPYIAAGDPHLA 206 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 ++R F+P +L DGLS R I G L G +E GY+Q ++ E+ Sbjct: 207 EGDLR-FEPIDALTDHDDGLSDLRAIVSGAGMRLLPGGWLLMEHGYDQAAATRQLLEASG 265 Query: 244 LFLVNAFKDYGGNDR 258 V +D G +R Sbjct: 266 FADVFTARDLAGLER 280 >gi|297588766|ref|ZP_06947409.1| protein-(glutamine-N5) methyltransferase [Finegoldia magna ATCC 53516] gi|297574139|gb|EFH92860.1| protein-(glutamine-N5) methyltransferase [Finegoldia magna ATCC 53516] Length = 263 Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 85/249 (34%), Positives = 134/249 (53%), Gaps = 16/249 (6%) Query: 19 SHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESI--HRILGWRDFYNVRLTLSSDTFEPRP 76 S +I D + DD ++ L + L E I ILG++ FYN + + PR Sbjct: 28 SDSIIHSNDEISDDDEKTILE---YKKLYDEDIPIEYILGFKYFYNRKFYTDPNVLIPRF 84 Query: 77 ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136 +TE+LVD + + K D + + +G+G ++ L L +S K +GVDI+ KA+E+ Sbjct: 85 DTEILVDEIIKTN----RKFDNILEIGIGSGIISITLNLELDS---KVLGVDINEKAIEL 137 Query: 137 AKSNAVT-NGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195 +K NA + N + F + SD + +V +D+IVSNPPYI+ + L ++ +PR + Sbjct: 138 SKKNAESLNATNVEF--VYSDLYENVNSKYDLIVSNPPYIDKKDFNSLETKILK-EPRSA 194 Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGG 255 L GG DGL YR I + S +LN+DG+ + EIGYNQ+ + I + KD+ G Sbjct: 195 LFGGDDGLYFYRKIINQASDYLNEDGMLAFEIGYNQRESIFEILDENGFKNHYCIKDFNG 254 Query: 256 NDRVLLFCR 264 DRV++ R Sbjct: 255 FDRVIIARR 263 >gi|116075869|ref|ZP_01473128.1| hypothetical protein RS9916_40426 [Synechococcus sp. RS9916] gi|116067184|gb|EAU72939.1| hypothetical protein RS9916_40426 [Synechococcus sp. RS9916] Length = 299 Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 76/204 (37%), Positives = 108/204 (52%), Gaps = 8/204 (3%) Query: 57 WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSL--PRIEKRDVVRILDLGTGTGAVCLA 114 WRD L +S D PR ETELLVD A+A L P + DLGTG+GAV +A Sbjct: 87 WRDL---ELWVSPDALIPRQETELLVDLAVARGLQSPSPQWGRGRIWADLGTGSGAVAVA 143 Query: 115 LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSN 171 L ++ ++G VD S AL +A+ N + + Q W+ + G D++VSN Sbjct: 144 LARQLSGWQGHAVDCSAAALALARRNLESWADGMAWQLHQGSWWQPLRPWWGQLDLVVSN 203 Query: 172 PPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231 PPYI + +VD L VRD +PR++LDGG+DGL R + DG + L G +E ++Q Sbjct: 204 PPYIPAGVVDQLDPVVRDHEPRLALDGGLDGLDCCRLLLDGAAEALAPGGWLLLEHHHDQ 263 Query: 232 KVDVVRIFESRKLFLVNAFKDYGG 255 V+ + + L V A +D G Sbjct: 264 SEAVLALMTNAGLRDVQAAQDLEG 287 >gi|89897679|ref|YP_521166.1| hypothetical protein DSY4933 [Desulfitobacterium hafniense Y51] gi|89337127|dbj|BAE86722.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 285 Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 80/266 (30%), Positives = 125/266 (46%), Gaps = 12/266 (4%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L + L Q+ ++ + L Q I R + E + I+ ++F + Sbjct: 25 DADLLLGHILSLRREQLYLEREQTLGPEQEAAYQQMISRRARREPLQYIVKHQEFMGLDF 84 Query: 66 TLSSDTFEPRPETELLVDSALAF------SLPRIEKRDVVRILDLGTGTGAVCLALLKES 119 + PR +TE+LV+ L S R + I DL TG+GA+ +++ Sbjct: 85 YVDERVLIPRADTEILVEKVLELKKEWQHSADRAGGGESPHIADLCTGSGALAISIAHFW 144 Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESV 178 P + VG D+S AL++A+ N GV R Q D+ + G +D+IVSNPPY+ Sbjct: 145 PQAEVVGTDLSRDALDVARFNGERLGV--RIQWRQGDFLEPLRGDSWDLIVSNPPYVTQA 202 Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238 L E+ +PR++ GG DGL YR +A L + G+ VEIG+ Q V + Sbjct: 203 EYGELAPELAK-EPRMAFLGGADGLDFYRELAREARSLLREKGIILVEIGWQQGNSVAEL 261 Query: 239 FESRKLFLVNAFKDYGGNDRVLLFCR 264 F+ + F +D GG DRV +F R Sbjct: 262 FQQQG-FQTQIVQDLGGRDRV-VFAR 285 >gi|307297958|ref|ZP_07577762.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Thermotogales bacterium mesG1.Ag.4.2] gi|306916044|gb|EFN46427.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Thermotogales bacterium mesG1.Ag.4.2] Length = 277 Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 69/198 (34%), Positives = 110/198 (55%), Gaps = 12/198 (6%) Query: 14 VTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFE 73 V L+ +I+D + ++ + A+ R ++ E I +LG+R+F+ +RL ++ Sbjct: 33 VLSLNEADLILDGEKEIESKLSAKYMKAVERVVEGEPIDYVLGFREFFGIRLEVTRSVLI 92 Query: 74 PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133 PR ETE LV+ + E+++ D+GTG+GA+ AL + P DIS A Sbjct: 93 PRNETEELVEIVID------EEKNSKVFADIGTGSGAIACALARNIPSSLVFATDISRDA 146 Query: 134 LEIAKSNAVTNGV-SERFDTLQSDWFSSVEGLFD---VIVSNPPYIESVIVDCLGLEVRD 189 L +A+ NA TNG+ + RF ++ D S + D VIVSNPPY+ + +D L + VR Sbjct: 147 LMLAEKNARTNGIFNIRF--IEGDNISGLNDFLDSVEVIVSNPPYVRTGDLDSLDINVRK 204 Query: 190 FDPRISLDGGIDGLSHYR 207 ++P ++LDGG DGL YR Sbjct: 205 YEPMVALDGGKDGLDFYR 222 >gi|127513839|ref|YP_001095036.1| HemK family modification methylase [Shewanella loihica PV-4] gi|126639134|gb|ABO24777.1| modification methylase, HemK family [Shewanella loihica PV-4] Length = 280 Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 81/257 (31%), Positives = 125/257 (48%), Gaps = 8/257 (3%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L + + PD L Q + R I I+G R+F+++ Sbjct: 26 DAEVMLLHIIHKQRSYLYTWPDERLTSEQVTEYKQMVGRRELGTPIAHIVGEREFWSLPF 85 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 ++ T PRP+TE+LV++AL +LP E ++LDLGTGTGA+ L+L E ++ Sbjct: 86 MVNPTTLIPRPDTEILVETAL--NLPLAEN---AKVLDLGTGTGAIALSLAFERSNWQIT 140 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLG 184 VD +A+ +AK+N N + + LQSDWF ++ F++IVSNPPYI+ Sbjct: 141 AVDKVLEAVALAKANR-DNLKLPQVEVLQSDWFDAINRYDFNLIVSNPPYIDEEDEHLSQ 199 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 +VR F+P +L G G + IA+ +L G +E G+ Q + V Sbjct: 200 GDVR-FEPHSALTAGEHGYADLFYIAEAARDYLAPGGYLLLEHGFGQALTVRDKMIELGY 258 Query: 245 FLVNAFKDYGGNDRVLL 261 V +D+G NDR L Sbjct: 259 EAVATVRDFGSNDRCTL 275 >gi|17227611|ref|NP_484159.1| protoporphyrinogen oxidase [Nostoc sp. PCC 7120] gi|17135093|dbj|BAB77639.1| protoporphyrinogen oxidase [Nostoc sp. PCC 7120] Length = 304 Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 73/194 (37%), Positives = 103/194 (53%), Gaps = 14/194 (7%) Query: 46 LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAF-----SLPRIEKRDVVR 100 L + I + WR F +LT+SS PRPETE L+D A+A S +++ V Sbjct: 82 LPVQYIAGVTPWRKF---KLTVSSAVLIPRPETECLIDLAVAAVANSESAMHLQQGHWV- 137 Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF-- 158 DLGTG+GA+ L L P VD S +AL IA+ NA G+ +R Q W+ Sbjct: 138 --DLGTGSGAIALGLADAFPEATIHAVDCSVEALAIAQQNAWNAGLFDRMRFYQGRWWEP 195 Query: 159 -SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217 S ++G F+ +VSNPPYI S IV L EV + +P ++LDGG DGL R + + +L Sbjct: 196 LSLLKGQFNGMVSNPPYIPSDIVPTLQPEVVNHEPHLALDGGADGLDAIRHLIEVAPSYL 255 Query: 218 NKDGLCSVEIGYNQ 231 G+ +E+ Q Sbjct: 256 RPGGIWLIEMMAGQ 269 >gi|308233417|ref|ZP_07664154.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Atopobium vaginae DSM 15829] gi|328944391|ref|ZP_08241853.1| protein-(glutamine-N5) methyltransferase [Atopobium vaginae DSM 15829] gi|327490975|gb|EGF22752.1| protein-(glutamine-N5) methyltransferase [Atopobium vaginae DSM 15829] Length = 526 Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 80/266 (30%), Positives = 121/266 (45%), Gaps = 20/266 (7%) Query: 10 FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69 L V G S ++ + D VLD Q + + + + + I G F ++ + Sbjct: 34 LLSSVMGFSRVELYLHYDQVLDASQLNAMHQRVEARSQGKPLQYITGEMPFRHIIMQCKP 93 Query: 70 DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129 PRPETE+LVD +A E R+L++GTG+G + L+L E + D+ Sbjct: 94 GVLIPRPETEVLVDIGIAALKEAHEYHRQPRVLEIGTGSGCIALSLASEVDSCTVLATDV 153 Query: 130 SCKALEIAKSNAVTNGVSERFD----TLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185 S ALE+A+ N + R ++ S G FD+++SNPPY+ + V L Sbjct: 154 SQDALELAQRNCQALHLEHRVTFVSCSIAQGVNPSYYGQFDLLISNPPYVPTSAVKTLPA 213 Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI---------------GYN 230 EV F+P ++LDGG DGL ++ I + L G+ VE+ G Sbjct: 214 EVALFEPHLALDGGKDGLDIFQKILETAPHMLRPGGMLCVELFEDNVDKAQALCVASGVW 273 Query: 231 QKVDVVRIFESRKLFLVNAFK-DYGG 255 QKV + R RK FLV K D+G Sbjct: 274 QKVYIERDLTHRKRFLVARLKGDFGA 299 >gi|189347186|ref|YP_001943715.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Chlorobium limicola DSM 245] gi|189341333|gb|ACD90736.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Chlorobium limicola DSM 245] Length = 296 Score = 110 bits (274), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 77/221 (34%), Positives = 108/221 (48%), Gaps = 8/221 (3%) Query: 46 LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLG 105 L + I+G + FY + PRPETELLV+ A F R R+LD+G Sbjct: 73 LDGRPVQYIIGEQFFYGKPFVVDERVLIPRPETELLVEHAAEFLTTRKPVNPECRLLDIG 132 Query: 106 TGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF-----SS 160 TG+G + + L P+ + +D S AL++A+ NA GV +R Q+D F S Sbjct: 133 TGSGCIAVTLAGLFPYLEVTALDRSEDALDVARGNARKQGVLDRILFFQADMFDPDLVSR 192 Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220 FDVIVSNPPYI D L EVR F+P+ +L DG Y I + L Sbjct: 193 FSSPFDVIVSNPPYIPECEWDGLQKEVRGFEPKDALITP-DGSDAYLAICRTAALILKPG 251 Query: 221 GLCSVEIGYNQKVDVVR-IFESRKLFLVNAFKDYGGNDRVL 260 G +EI + + ++VR I S ++ KDY G DR++ Sbjct: 252 GALCLEI-HAEGAEMVRSIMASEHFGSISVLKDYSGFDRIV 291 >gi|170730036|ref|YP_001775469.1| protoporphyrinogen oxidase [Xylella fastidiosa M12] gi|167964829|gb|ACA11839.1| protoporphyrinogen oxidase [Xylella fastidiosa M12] Length = 275 Score = 110 bits (274), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 72/210 (34%), Positives = 110/210 (52%), Gaps = 13/210 (6%) Query: 54 ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113 ++G R F+ + + +SS T PR ETE LV+ AL R++ R+ DLGTG+GA+ L Sbjct: 67 LIGRRGFWTLDVIVSSATLIPRAETETLVEQALQ----RLDHASERRVADLGTGSGAIAL 122 Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL---QSDWFSSVEG-LFDVIV 169 A+ E P + + D S AL+IA NA + R + + + +W+ ++ G FD+IV Sbjct: 123 AIACERPQAQVLATDNSAAALDIAARNASAH----RLNHVVFREGNWYEALLGERFDLIV 178 Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY 229 SNPPYI + ++R F+P +L G DGL R +A G HL G +E G+ Sbjct: 179 SNPPYIAVTDLHLTQGDLR-FEPPSALISGSDGLDALRILAAGAPAHLRPGGWLVLEHGW 237 Query: 230 NQKVDVVRIFESRKLFLVNAFKDYGGNDRV 259 +Q + + + L V +D DRV Sbjct: 238 DQGAAMRTLLHTAGLVAVATVQDLEARDRV 267 >gi|77460968|ref|YP_350475.1| modification methylase HemK [Pseudomonas fluorescens Pf0-1] gi|77384971|gb|ABA76484.1| [protein release factor]-glutamine N5-methyltransferase [Pseudomonas fluorescens Pf0-1] Length = 276 Score = 110 bits (274), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 79/237 (33%), Positives = 122/237 (51%), Gaps = 8/237 (3%) Query: 26 PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85 P+ ++ + R E + ILG + F+ + L ++ T PRP+TELLV++A Sbjct: 42 PERIVPSEAALVFAEYLQRRRGGEPVAYILGQQGFWKLDLEVAPHTLIPRPDTELLVEAA 101 Query: 86 LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145 L ++LDLGTG+GA+ LAL E P +K VD +A+ +A+ N Sbjct: 102 LELL-----PATPAKVLDLGTGSGAIALALASERPAWKVTAVDRVLEAVALAERNRQRLH 156 Query: 146 VSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204 ++ L S WFS++EG F++I+SNPPYI + + +VR F+P +L GIDGL Sbjct: 157 LNN-ATVLSSHWFSALEGKRFELIISNPPYIRAADPHLMEGDVR-FEPESALVAGIDGLD 214 Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 R I HL G +E GY+Q V + ++ V++ D GG+ R+ L Sbjct: 215 DLRLIIAQAPAHLEAGGWLMLEHGYDQAEAVRDLLLTQGFDEVHSRTDLGGHQRISL 271 >gi|332800046|ref|YP_004461545.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Tepidanaerobacter sp. Re1] gi|332697781|gb|AEE92238.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Tepidanaerobacter sp. Re1] Length = 285 Score = 110 bits (274), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 82/264 (31%), Positives = 125/264 (47%), Gaps = 11/264 (4%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 DS L V G +++V + + +Q + + + I I+G ++FY + Sbjct: 25 DSELILGYVLGKDRLKLLVYDEMSITKQQLECFNDLLALRCQSTPIAYIIGRKEFYGLDF 84 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 + PRPETE LV+ L I + I DL G+GA+ +A+ + + Sbjct: 85 YIKPGVLIPRPETEFLVEETLNV----IYSIENPLIADLCCGSGAISVAVAVNNNRVRVY 140 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPYIESVIVD 181 DIS A E+A +N +GV +R +Q D + E FDV+VSNPPYI + Sbjct: 141 ASDISDVACEVASTNIKLHGVQDRVSLMQGDLWMPFEEKNIRGFDVVVSNPPYIPKEELS 200 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 L +V++ +P+I+L+GG GL YR I L G EIG+NQ DV + + Sbjct: 201 TLPDDVKN-EPQIALNGGTGGLEFYRRIVLRAPEFLKIGGRIIFEIGWNQARDVEIMLKE 259 Query: 242 RKLFLVNAFKDYGGNDRVL--LFC 263 + KDY G DRV+ +FC Sbjct: 260 TGFQDIKIIKDYAGFDRVISGVFC 283 >gi|298243250|ref|ZP_06967057.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Ktedonobacter racemifer DSM 44963] gi|297556304|gb|EFH90168.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Ktedonobacter racemifer DSM 44963] Length = 299 Score = 110 bits (274), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 72/262 (27%), Positives = 131/262 (50%), Gaps = 8/262 (3%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L + + + P+ L Q I R ++E + ++G ++FY Sbjct: 30 DAQVLLGHILQVPRATLYAYPERELSVEQEKRFRELIERRARNEPVAYLVGEKEFYGRDF 89 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 + + PRPETELLV++AL + R++ ++ + D+GTG+G + + L E P + Sbjct: 90 QVDARVLIPRPETELLVEAALKEARRRLDAGEMPVVADVGTGSGVIPITLALEEPRLPVI 149 Query: 126 -GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184 D+S +ALE+A++N GV ER LQS ++ D++++N PY+ + + + Sbjct: 150 YACDVSAEALEVARTNCQRYGVEERVILLQSYLLQALPQPVDMLLANLPYVGTDELPQMA 209 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRH--LNKDGLCSVEIGYNQKVDVVRIFESR 242 +V +++P ++L G DGL + ++ L G C +E+GY + + R+ +S Sbjct: 210 PDVWNYEPHLALFSGPDGLGLLTRLCREARQYGMLRPGGWCVLEMGYLHQEPLTRLVKS- 268 Query: 243 KLFL---VNAFKDYGGNDRVLL 261 L+ V DY G DR L+ Sbjct: 269 -LWPKADVACISDYAGLDRHLV 289 >gi|56752240|ref|YP_172941.1| protoporphyrinogen IX oxidase [Synechococcus elongatus PCC 6301] gi|56687199|dbj|BAD80421.1| protoporphyrinogen IX oxidase [Synechococcus elongatus PCC 6301] Length = 293 Score = 109 bits (273), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 73/206 (35%), Positives = 102/206 (49%), Gaps = 8/206 (3%) Query: 57 WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116 WRD L +S PRPETEL++D A+A+S R DLGTG+GA+ +AL Sbjct: 84 WRDL---ELQVSPAVLIPRPETELIIDLAIAWSQAE-PARQTGFWADLGTGSGAIAIALA 139 Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW---FSSVEGLFDVIVSNPP 173 + P + VD S +AL IA++NA G+S+R Q W + G I+SNPP Sbjct: 140 RALPQITVLAVDDSAEALAIARNNAARYGLSDRIRWYQGSWLVPLADYRGQLQAIISNPP 199 Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233 YI + L EVRD +PR +L+ G DGL R +A +L GL E Q Sbjct: 200 YIPTQEWQALEPEVRDHEPRQALESGPDGLEALRHLAQAAPDYLRSLGLWLCEHMAGQST 259 Query: 234 DVVRIFESRKLFL-VNAFKDYGGNDR 258 V + + + + + +D G DR Sbjct: 260 AVTALLAAIPGYSEIQSHRDLAGRDR 285 >gi|227431145|ref|ZP_03913201.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] gi|227353097|gb|EEJ43267.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] Length = 330 Score = 109 bits (273), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 76/217 (35%), Positives = 114/217 (52%), Gaps = 6/217 (2%) Query: 46 LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLG 105 +K++ ILG FY + PRPETE LV+ L + + V +LD+G Sbjct: 114 VKNKPPQYILGHAPFYGREFMVDERVLIPRPETEQLVEWILKDA---GNTKHPVSVLDIG 170 Query: 106 TGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL- 164 TG+GA+ L+ E+ KG DIS AL +A+ NA +S ++SD FS++ GL Sbjct: 171 TGSGAIIETLMLENDRVKGFAADISQDALTVAEMNAQRFNLS-HLHFVESDVFSALSGLK 229 Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224 FD+IVSNPPYI + + + V F+P +L DGL+ Y IA G+ HL + G Sbjct: 230 FDLIVSNPPYISNSDENEMDDSVLTFEPHTALFAENDGLAIYEKIARGLDAHLTEYGRAY 289 Query: 225 VEIGYNQKVDVVRIFESR-KLFLVNAFKDYGGNDRVL 260 EIGY Q V ++ ++ + +D+ G DR++ Sbjct: 290 FEIGYKQGKAVQQLLQAALPKAKITLRQDFSGLDRMI 326 >gi|255534978|ref|YP_003095349.1| putative protoporphyrinogen oxidase [Flavobacteriaceae bacterium 3519-10] gi|255341174|gb|ACU07287.1| putative protoporphyrinogen oxidase [Flavobacteriaceae bacterium 3519-10] Length = 285 Score = 109 bits (273), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 85/260 (32%), Positives = 133/260 (51%), Gaps = 17/260 (6%) Query: 10 FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKH-ESIHRILGWRDFYNVRLTLS 68 F+ R+ G + D+ Q LT I++ LK +ILG +FY + ++ Sbjct: 32 FVHRILGYDRFAQRKFSNETQDENQLQKLT-EILKQLKTGMPFQQILGETEFYGLNFFVN 90 Query: 69 SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128 + PRPETE L++ A+A K ++ILD+GTG+G + + L K P + +D Sbjct: 91 ENVLIPRPETEELLELAIAEITKLTVKNQSLKILDIGTGSGIIPVVLKKHFPAAELSAID 150 Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWF-SSVEGLFDVIVSNPPYIESVIVDCLGLEV 187 S KALE+A+ NA + V+ F + D+ + G+FD+I+SNPPYI D + V Sbjct: 151 YSEKALEVARKNADFHQVNINF--IHQDYLGGELNGIFDIIISNPPYIGRDENDEISDSV 208 Query: 188 RDFDPRISLDGGIDG-LSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246 ++F+P ++L + L Y IA+ HL+ G+ +EI NQK+ E+R LF Sbjct: 209 KNFEPLMALFAPAENPLIFYEKIANDCKTHLSDGGMLFLEI--NQKLGS----ETRDLFT 262 Query: 247 -----VNAFKDYGGNDRVLL 261 V KD GNDR ++ Sbjct: 263 EVLHEVRLVKDLSGNDRFVV 282 >gi|114798227|ref|YP_759358.1| HemK family methyltransferase [Hyphomonas neptunium ATCC 15444] gi|114738401|gb|ABI76526.1| methyltransferase, HemK family [Hyphomonas neptunium ATCC 15444] Length = 285 Score = 109 bits (273), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 73/220 (33%), Positives = 110/220 (50%), Gaps = 7/220 (3%) Query: 41 AIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR 100 A+ R E I ILG FY + + + PR ++E +V++AL R+ K + Sbjct: 63 AVERRAAREPIQHILGVTQFYGLDIRTDARALIPRIDSECVVEAAL----DRMPKNTPLV 118 Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 + DLGTG+G + ALL + P +G GV+ S +A +A+ N ++ R W + Sbjct: 119 LADLGTGSGCLLAALLSQRPLARGEGVEASAEAASLARENLDALNLAARGAVFDGSW-TQ 177 Query: 161 VEGL--FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 +G D+I+SNPPYI S + L EVR DP +LDGG DGL YR I + + Sbjct: 178 WQGWENADLIISNPPYIASAEIAVLEPEVRAHDPLSALDGGADGLDAYREIIALAAARMK 237 Query: 219 KDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258 EIG++QK + + + + +D GGNDR Sbjct: 238 PGAWLVFEIGHDQKAALEWLMAQTGFEAIASGQDLGGNDR 277 >gi|182415308|ref|YP_001820374.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Opitutus terrae PB90-1] gi|177842522|gb|ACB76774.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Opitutus terrae PB90-1] Length = 284 Score = 109 bits (273), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 75/226 (33%), Positives = 114/226 (50%), Gaps = 6/226 (2%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101 + R + E + +LG +F+ ++L PRPETE LV+ +A + RI Sbjct: 62 VRRRGQREPLQYVLGETEFFGLKLKTDRRALIPRPETERLVELVVARY---ADTAPPARI 118 Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 LDLGTG+GA+ LAL + G+D S AL +A NA G+ R LQSDW++ + Sbjct: 119 LDLGTGSGAIALALASRFTDAQVTGLDHSEDALALAAENAAATGLPSRVTWLQSDWYAGL 178 Query: 162 E--GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL-DGGIDGLSHYRTIADGVSRHLN 218 F++IV+NPPY+ + EVR+ +P ++L GG DGL+ R I G ++ L Sbjct: 179 PDGAAFELIVANPPYLSAEETAQTQPEVREHEPHLALTSGGPDGLADLRKILAGATQFLA 238 Query: 219 KDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 GL ++E G Q + + V + D G DR ++ R Sbjct: 239 AGGLIALETGIAQHPALCALAREAGFNQVESLPDLTGRDRYVIAHR 284 >gi|257064122|ref|YP_003143794.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Slackia heliotrinireducens DSM 20476] gi|256791775|gb|ACV22445.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Slackia heliotrinireducens DSM 20476] Length = 314 Score = 109 bits (273), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 84/289 (29%), Positives = 132/289 (45%), Gaps = 41/289 (14%) Query: 7 SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66 + + TGLS ++ + + L +R L +A+ R E + I G F + + Sbjct: 30 AQWLMSHATGLSRVEIYTNYERPLSTEERDVLRDALRRRGSGEPLQYIQGSAPFRFIEVK 89 Query: 67 LSSDTFEPRPETELLVDSAL-------------------------------AFSLPRIEK 95 + PRPETE+LVD A+ AF +P Sbjct: 90 VRPGVLIPRPETEVLVDEAMRELKSIMPDAFTHRTARDSMSVDGEEPVPAEAFKIP---- 145 Query: 96 RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155 ++D TG+G + A+ E + V D+S A+E+A+ NA G+ +R + Sbjct: 146 --TFNVVDACTGSGCIACAIASEHANAQVVATDVSETAVELARENAADLGLGDRIEVRLC 203 Query: 156 DWFSSVEGLF-DVIVSNPPYIESVIVDC-LGLEVRDFDPRISLDGGIDGLSHYRT-IADG 212 D + E + D+IVSNPPY+ + +VD + EV DF+PR++LDGG DGL YR +ADG Sbjct: 204 DLLADAEDSWADLIVSNPPYVPTAVVDSEIPAEVADFEPRLALDGGEDGLDIYRRLLADG 263 Query: 213 VSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 R L DG+ + E+ + R+ E V KD G R+++ Sbjct: 264 -KRVLKADGILACELHETCLEEAARLAEEAHYTQVRIAKDLAGRPRIIV 311 >gi|254443578|ref|ZP_05057054.1| methyltransferase, HemK family [Verrucomicrobiae bacterium DG1235] gi|198257886|gb|EDY82194.1| methyltransferase, HemK family [Verrucomicrobiae bacterium DG1235] Length = 286 Score = 109 bits (273), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 81/255 (31%), Positives = 128/255 (50%), Gaps = 5/255 (1%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 ++ + G+ ++ + D L + + + + + R K E + I+G F+ + L Sbjct: 29 NAEWLIASALGIDRMKLYMQFDRPLKEAELADMRSMVARRAKREPLQYIIGSAPFHELDL 88 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 + + PRPETE LV+ L SL E RI+DLGTG+GA+ LAL P + Sbjct: 89 KVDARALIPRPETEQLVELVLG-SLG--ENDAPYRIIDLGTGSGAIALALAFALPRAEIF 145 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVDCL 183 VD S +ALE+A+ NA+ G+ R + + SDWFS EG FD+IVSNPPY+ ++ Sbjct: 146 AVDASREALELAQENALRCGLQNRVNFVLSDWFSDFDPEGEFDLIVSNPPYLTQEELESA 205 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 EVR+ +P +L +GLS TI G L G+ +E G + +++ + E+ Sbjct: 206 EPEVREHEPVGALVADREGLSDLETILQGAFGRLKPGGMLWLETGIGHRAELLALCENAG 265 Query: 244 LFLVNAFKDYGGNDR 258 D+ G R Sbjct: 266 YAESLGIDDWSGRAR 280 >gi|73542730|ref|YP_297250.1| modification methylase HemK [Ralstonia eutropha JMP134] gi|72120143|gb|AAZ62406.1| Modification methylase HemK [Ralstonia eutropha JMP134] Length = 289 Score = 109 bits (273), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 80/255 (31%), Positives = 122/255 (47%), Gaps = 8/255 (3%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 ++ L VTGL+ Q+I L QR + R L E + ++G R+F+ + Sbjct: 31 EARMLLTHVTGLTRTQLITRDGDTLTLPQRDAFATLLARRLAGEPMAYLIGEREFFGRKF 90 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 ++ D PRP+TE+ +S+LA R+ R+LDLGTG+G + + + +E + Sbjct: 91 RVTPDVLIPRPDTEIAAESSLA----RLAGVPHPRVLDLGTGSGILAVTIARERTDAEVW 146 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVDCL 183 DIS AL +A+ NA G + R L SDW++++ E F +IVSNPPYI + Sbjct: 147 ATDISPGALMVAQDNASALG-ANRIHFLVSDWYAALPAELHFHLIVSNPPYIAEGDPHLI 205 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 ++R F+P +L DGLS I G L G +E GY+Q + E Sbjct: 206 EGDLR-FEPIDALTDHKDGLSDLAAIVAGAHGRLLPGGWLLMEHGYDQAEATQGLLERAG 264 Query: 244 LFLVNAFKDYGGNDR 258 V +D G R Sbjct: 265 FTEVFTARDLAGQQR 279 >gi|15838113|ref|NP_298801.1| protoporphyrinogen oxidase [Xylella fastidiosa 9a5c] gi|18203344|sp|Q9PD67|HEMK_XYLFA RecName: Full=Protein methyltransferase hemK homolog; AltName: Full=M.XfaHemK2P gi|9106546|gb|AAF84321.1|AE003981_3 protoporphyrinogen oxidase [Xylella fastidiosa 9a5c] Length = 275 Score = 109 bits (273), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 71/207 (34%), Positives = 108/207 (52%), Gaps = 7/207 (3%) Query: 54 ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113 ++G R F+ + + +SS T PR ETE LV+ AL R++ R+ DLGTG+GA+ L Sbjct: 67 LIGRRGFWTLDVMVSSATLIPRAETETLVEQALQ----RLDHASERRVADLGTGSGAIAL 122 Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNP 172 A+ E P + + D S AL+IA NA +G++ + DW+ ++ G FD+IVSNP Sbjct: 123 AIACERPQAQVLATDNSAAALDIAARNASAHGLNHVV-FREGDWYEALLGERFDLIVSNP 181 Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232 PYI ++R F+P +L G DGL R + G +L G +E G++Q Sbjct: 182 PYIAVTDPHLTQGDLR-FEPPSALISGGDGLDALRILTAGAPAYLRPGGWLVMEHGWDQG 240 Query: 233 VDVVRIFESRKLFLVNAFKDYGGNDRV 259 + + + L V +D DRV Sbjct: 241 AAMRTLLHTAGLVAVATVQDLEARDRV 267 >gi|293399751|ref|ZP_06643897.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291306151|gb|EFE47394.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 286 Score = 109 bits (272), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 81/262 (30%), Positives = 138/262 (52%), Gaps = 21/262 (8%) Query: 10 FLCRVTGLSSHQVIVDPDS--VLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67 +L +T + +H + ++ + +D ++F + R +K E + +LG+ FY R + Sbjct: 28 YLLELTNMEAHNLYMEYEQEVPVDIAEQF--EQGLCRLIKGEPLGHVLGFEWFYGYRFKV 85 Query: 68 SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 + D PRPETE LV + LA + + V + D+GTG+GA+ ++L KE + Sbjct: 86 NEDVLIPRPETEELVANVLA-AYDEVFDGKQVTVADIGTGSGAIAISLKKEEDRLHMLAT 144 Query: 128 DISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYI--ESVIVDC 182 DIS KA+ +AK NA N + F D LQ +++ D+++SNPPYI E + C Sbjct: 145 DISEKAVMVAKENAAANEATVCFMVGDMLQPLIERNIK--LDILISNPPYIPNEEKMETC 202 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 V D++P ++L GG DGL YR I + + LN+ + E+GY+QK + + ++ Sbjct: 203 ----VVDYEPHVALFGGEDGLKFYRIIFENALKVLNEKAFMAFEMGYDQKERLTAL--AK 256 Query: 243 KLF---LVNAFKDYGGNDRVLL 261 + F + +D G +R+L Sbjct: 257 EYFPEAKIEVLQDMSGKNRMLF 278 >gi|83720020|ref|YP_443438.1| hemK protein [Burkholderia thailandensis E264] gi|257137780|ref|ZP_05586042.1| hemK protein [Burkholderia thailandensis E264] gi|83653845|gb|ABC37908.1| hemK protein [Burkholderia thailandensis E264] Length = 285 Score = 109 bits (272), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 84/264 (31%), Positives = 129/264 (48%), Gaps = 19/264 (7%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDR--QRFFLTNAIVRSLKHESIHRILGWRDFYNV 63 D+ L G S Q+I D LD +R+ A R E + ++ G R+F+ + Sbjct: 24 DARILLAHALGWSRTQLITRADEPLDAAAIERYLALEA--RRAAGEPVAQLTGAREFFGL 81 Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 ++ D PRPETELLV++AL I+ +LDLG G+GA+ +++ P + Sbjct: 82 DFDVTPDVLIPRPETELLVETALDA----IDGIASPCVLDLGAGSGAIAVSIASVRPDAR 137 Query: 124 GVGVDISCKALEIAKSNA------VTNGVSERFDTLQSDWFSSVE-GL-FDVIVSNPPYI 175 +D S AL++A+ NA G RF L+SDW+++++ GL F V+VSNPPYI Sbjct: 138 VWALDRSAAALDVARRNARKLLDPARAGGPLRF--LESDWYAALDPGLRFHVVVSNPPYI 195 Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235 ++R F+PR +L DGL+ RTI G + G +E GY+Q V Sbjct: 196 ARHDPHLAEGDLR-FEPRGALTDEDDGLAAIRTIVAGAHAFVAPGGALWIEHGYDQAAAV 254 Query: 236 VRIFESRKLFLVNAFKDYGGNDRV 259 + E+ V + D +R Sbjct: 255 RALLEAAGFADVESLADLASIERA 278 >gi|254180489|ref|ZP_04887087.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Burkholderia pseudomallei 1655] gi|184211028|gb|EDU08071.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Burkholderia pseudomallei 1655] Length = 285 Score = 109 bits (272), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 84/262 (32%), Positives = 127/262 (48%), Gaps = 15/262 (5%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L G S Q+I D LD R R E I ++ G R+F+ + Sbjct: 24 DARILLAHALGWSRTQLITRADEPLDAAARARYLALQARRAAGEPIAQLTGAREFFGLEF 83 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 ++ D PRPETELLV++AL I+ +LDLGTG+GA+ +++ E P Sbjct: 84 DITPDVLIPRPETELLVETALDA----IDGIASPCVLDLGTGSGAIAVSIASERPDACVW 139 Query: 126 GVDISCKALEIAKSNA------VTNGVSERFDTLQSDWFSSVE-GL-FDVIVSNPPYIES 177 ++ S AL++A+ NA G RF L+SDW+++++ GL F V+VSNPPYI Sbjct: 140 ALERSVAALDVARRNARKLLDPARAGGPLRF--LESDWYAALDPGLRFHVVVSNPPYIAR 197 Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237 ++R F+PR +L DGL+ RTI G + G +E GY+Q V Sbjct: 198 HDPHLAEGDLR-FEPRGALTDENDGLAAIRTIVAGAHAFVAPGGALWLEHGYDQAAAVRA 256 Query: 238 IFESRKLFLVNAFKDYGGNDRV 259 + ++ V + D +R Sbjct: 257 LLDAAGFADVESRADLASIERA 278 >gi|309782947|ref|ZP_07677667.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Ralstonia sp. 5_7_47FAA] gi|308918371|gb|EFP64048.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Ralstonia sp. 5_7_47FAA] Length = 300 Score = 109 bits (272), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 79/258 (30%), Positives = 119/258 (46%), Gaps = 11/258 (4%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 ++ + VTGLS Q+I +D R ++ R L E + +LG R+F+ Sbjct: 31 EARMLVSHVTGLSRVQLITQDACAIDVAARARISELAARRLAGEPMAYLLGEREFFGRTF 90 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 ++ PRP+TELLV+ A L +E+ D +LD+GTG+G + + + + Sbjct: 91 KVTPAVLIPRPDTELLVEQA----LDHLEECDAPAVLDMGTGSGIIAITIALARRDARVW 146 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-----LFDVIVSNPPYIESVIV 180 D S AL +A NA G + L DW+ ++ G FD+I SNPPYI + Sbjct: 147 ATDASTDALAVAIDNAKALGATNVQAAL-GDWYGALAGTEAPPAFDLIASNPPYIAATDA 205 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 ++R F+P +L DGL H R+I G L G VE GY+Q V + Sbjct: 206 HLDQGDLR-FEPASALTDHDDGLRHLRSIVAGAPARLVSGGWLLVEHGYDQGEPVRALLG 264 Query: 241 SRKLFLVNAFKDYGGNDR 258 V +D G+DR Sbjct: 265 GAGFANVFTAQDLAGHDR 282 >gi|302036344|ref|YP_003796666.1| protein-(glutamine-N5) methyltransferase [Candidatus Nitrospira defluvii] gi|300604408|emb|CBK40740.1| Protein-(glutamine-N5) methyltransferase [Candidatus Nitrospira defluvii] Length = 309 Score = 109 bits (272), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 68/231 (29%), Positives = 114/231 (49%), Gaps = 10/231 (4%) Query: 38 LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97 + + R E + +LG ++F + ++S PRPE+ LLV ++ R + Sbjct: 70 MQELVARRANREPLQYLLGTQEFCDREFRVTSAVLIPRPESALLVQE----TIRRCRQNP 125 Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 ++D+GTG+G + +++ P + + +D S AL +A++N G R + +Q D Sbjct: 126 SAIVVDVGTGSGCLAVSVASALPDARVLAIDASADALAVAQANMEQFGFGARIECVQGDL 185 Query: 158 FSSVE-----GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212 + + DVIVSNPPYI + + L EVR F+P ++L GG DG+ +R + Sbjct: 186 LAPLAQRGETSQVDVIVSNPPYIADLDLVTLQPEVRCFEPHLALAGGPDGMDVHRRLLQQ 245 Query: 213 VSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLV-NAFKDYGGNDRVLLF 262 +L G+ +E+G Q V R E F + +D GG DRV+ F Sbjct: 246 APVYLKSRGVLLMEVGLGQAELVCREAEKSGWFRTYDVLRDEGGIDRVVCF 296 >gi|323693925|ref|ZP_08108112.1| hypothetical protein HMPREF9475_02975 [Clostridium symbiosum WAL-14673] gi|323502022|gb|EGB17897.1| hypothetical protein HMPREF9475_02975 [Clostridium symbiosum WAL-14673] Length = 354 Score = 109 bits (272), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 84/298 (28%), Positives = 129/298 (43%), Gaps = 70/298 (23%) Query: 32 DRQRFFLTNAIVRSLKHE-----SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL 86 +RQR + + R + I ILG ++F + T+ + PR +TE LV++ L Sbjct: 60 NRQRLEKSYPVYRDYLEKRASRIPIQHILGNQEFMGLEFTVDENVLIPRQDTEKLVETVL 119 Query: 87 AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKS------- 139 R K + +LD+ TG+G + ++L + K DIS AL++AK Sbjct: 120 -----RDHKNQALSVLDMCTGSGCIAVSLAVLGGYDKVTAADISKAALKVAKKNVRRHFL 174 Query: 140 --------------------------------------------NAVTNGVS-------E 148 N + G++ + Sbjct: 175 VQKGTARSESTLISDTPWKLKMCTYVYQGGDAQEQETAGESVSDNGYSPGIARIPGVRKK 234 Query: 149 RFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206 F L+SD F ++E FD+IVSNPPYI S ++D L EV+D +PR++LDG DGL Y Sbjct: 235 EFVLLESDLFLNLEQDEKFDIIVSNPPYIPSAVIDGLEPEVKDHEPRMALDGAEDGLYFY 294 Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 R +A R+L + G EIG +Q V ++ + + KD G DRV+ CR Sbjct: 295 RILAQQSGRYLKEGGFIYFEIGCDQAEAVGKLLTAAGFGEIETIKDEPGLDRVVRACR 352 >gi|92113654|ref|YP_573582.1| HemK family modification methylase [Chromohalobacter salexigens DSM 3043] gi|91796744|gb|ABE58883.1| [protein release factor]-glutamine N5-methyltransferase [Chromohalobacter salexigens DSM 3043] Length = 286 Score = 109 bits (272), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 84/223 (37%), Positives = 111/223 (49%), Gaps = 15/223 (6%) Query: 43 VRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRIL 102 RSL H H + G R+F+ + L + T PRP+TE LV++ LA +P R L Sbjct: 63 ARSLGHPVAH-LTGEREFWGLVLRVDDTTLIPRPDTECLVEALLA-RMPHATGR----AL 116 Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162 DLGTG+GA+ LAL E P + VGVD A+ +A +NA +S L SDWFS++ Sbjct: 117 DLGTGSGAIALALASERPAWHVVGVDKVPGAVRLATANAERLALSN-ATFLVSDWFSALG 175 Query: 163 G-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL---DGGIDGLSHYRTIADGVSRHLN 218 FDVI +NPPYI +VR F+PR +L D G+ L H A HL Sbjct: 176 NETFDVIAANPPYIAEDDPHLAQGDVR-FEPRSALVAEDAGLADLCHLALTARA---HLA 231 Query: 219 KDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 G ++E G Q V I S V + D G +RV L Sbjct: 232 GGGWLAMEHGMTQAARVREILTSAGYRDVASVADLGARERVTL 274 >gi|114567902|ref|YP_755056.1| peptide release factor-glutamine N5-methyltransferase [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|114338837|gb|ABI69685.1| peptide release factor-glutamine N5-methyltransferase [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 282 Score = 109 bits (272), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 78/232 (33%), Positives = 120/232 (51%), Gaps = 12/232 (5%) Query: 31 DDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSL 90 ++RQ++ I R +K E + I+G ++F ++ L+ PRPETELLV+ AL + Sbjct: 56 EERQQY--REVIKRRIKGEPLAYIVGHKEFMSLEFKLNQAVLIPRPETELLVEEALEIA- 112 Query: 91 PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150 E ++ +RI D+GTG+GA+ ++L P + DIS ALE A+ NA +GV+ F Sbjct: 113 ---EGKEGLRICDVGTGSGAIAVSLAFYVPTAQVYATDISADALEKARENATRHGVAITF 169 Query: 151 DTLQSDWFSSV--EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208 Q D + E FD+IV+N PYI S L V+D++P ++L DGL YR Sbjct: 170 --YQGDLLFPLLNEEPFDIIVANLPYIGSKEFILLDSGVKDYEPALALLAPGDGLDLYRR 227 Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 + + L +G +EIG+ Q + + KD G DR+L Sbjct: 228 LLPQAAALLAPEGCLLLEIGHEQGSRAREMMQG--WGETEIIKDLAGRDRLL 277 >gi|270291032|ref|ZP_06197255.1| conserved hypothetical protein [Pediococcus acidilactici 7_4] gi|270280428|gb|EFA26263.1| conserved hypothetical protein [Pediococcus acidilactici 7_4] Length = 285 Score = 109 bits (272), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 76/233 (32%), Positives = 119/233 (51%), Gaps = 9/233 (3%) Query: 30 LDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFS 89 LD Q+F + R++ E + I +FY + S PR ETE LV+ L + Sbjct: 52 LDQWQQF--QKDVQRAVNGEPVQYITNKANFYGREFYVDSRVLIPRVETEELVEHILN-A 108 Query: 90 LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 P++ + +R+LD+GTG+G + + L E P ++ VDI+ +AL +A+ NA Sbjct: 109 HPQLNQS--LRVLDIGTGSGNIAITLKLERPDWQVTAVDIASEALAVAQQNAHQQEAV-- 164 Query: 150 FDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208 D Q F +V+G FD+IVSNPPYI D + V +++P +L DGL Y+ Sbjct: 165 VDFRQGSLFDAVKGERFDIIVSNPPYIAENERDVMDQSVIEYEPDKALFAPDDGLFWYKQ 224 Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIF-ESRKLFLVNAFKDYGGNDRVL 260 I ++ HL G E GY+Q + + F E + V+ +D G+DR+L Sbjct: 225 IGRQLANHLTNAGQLWCEFGYHQGAKLKQYFSELPGVKDVDVLQDLSGHDRIL 277 >gi|291288201|ref|YP_003505017.1| modification methylase, HemK family [Denitrovibrio acetiphilus DSM 12809] gi|290885361|gb|ADD69061.1| modification methylase, HemK family [Denitrovibrio acetiphilus DSM 12809] Length = 273 Score = 108 bits (271), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 75/239 (31%), Positives = 127/239 (53%), Gaps = 23/239 (9%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLD----DRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 D+ F TG+ + V+ + ++ +Q+ NA E + ++ ++FY Sbjct: 20 DAIEFASHTTGIPYTLISVNLNEHVEITRETKQKLARINA------DEPLAYVIQNKNFY 73 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 + + + + PRPETE+LVD AL F+ KR+ +R+LD+ TG+G + AL+ P Sbjct: 74 GLDMYVDENVLIPRPETEILVDEALKFA----GKRENLRVLDICTGSGCILTALMSSLPD 129 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYI-ES 177 +G+G+DIS AL+ AK NA T+G++ER D ++ D E G FD++ NPPY+ ES Sbjct: 130 SEGIGLDISEGALDAAKFNADTHGIAERVDFVKGDALRIKELGLGTFDIVTCNPPYLSES 189 Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG---LCSVEIGYNQKV 233 + L + ++P+ +L G D + Y+ + D + NK+G + IG QK+ Sbjct: 190 EWL--LSAKSLKYEPKNALSAGKDDILFYKKLLDMIPYLCNKNGGGAFFELGIGQYQKL 246 >gi|289523199|ref|ZP_06440053.1| protein-(glutamine-N5) methyltransferase [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289503742|gb|EFD24906.1| protein-(glutamine-N5) methyltransferase [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 283 Score = 108 bits (271), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 72/244 (29%), Positives = 117/244 (47%), Gaps = 10/244 (4%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 + L +S LC+V G +I + + D + +L + R E + I FY Sbjct: 21 EPLVESDLLLCKVLGCDRSWLIAHKERPIFDYELQYLNALLERRCNKEPLAYIFNEAQFY 80 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 + PRPETE LV+ AL+ D +D GTG+G + ++LL E+P Sbjct: 81 GRNFYVGEGVLVPRPETESLVEIALSLV-------DEGIAVDWGTGSGCIVISLLLENPK 133 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW---FSSVEGLFDVIVSNPPYIESV 178 +G+ +D++ KAL A N + +R S + D +VSNPPY+ + Sbjct: 134 LRGIALDVNPKALYWAWKNVDKYDLFDRLTLWHESGKLPAQSAKSGVDAVVSNPPYVPTN 193 Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238 +VD L EV+ F+P ++LDGG DG YR + + S L + G VE G ++ +++ + Sbjct: 194 LVDTLMSEVKCFEPILALDGGNDGTLWYRFLFERASLWLKEGGWLIVETGGWKEKEILSL 253 Query: 239 FESR 242 +R Sbjct: 254 APAR 257 >gi|134093471|ref|YP_001098546.1| protein methyltransferase HemK [Herminiimonas arsenicoxydans] gi|133737374|emb|CAL60417.1| Protein methyltransferase HemK (Protein-glutamine N-methyltransferase hemK) (Protein-(glutamine-N5) MTase hemK) [Herminiimonas arsenicoxydans] Length = 276 Score = 108 bits (271), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 84/255 (32%), Positives = 138/255 (54%), Gaps = 10/255 (3%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 ++ + VT LS Q+I + + VL+ + L R + E + +LG R+FY + Sbjct: 23 EARMLIGHVTQLSRVQLITNAERVLNAAEAQQLATLFARRMAGEPMAYLLGEREFYGLSF 82 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 +S PRP+TELLV+ +L R+ ++ R+LD+GTG+GA+ +A+ P Sbjct: 83 QVSPAVLIPRPDTELLVE----LALQRLPQQG--RVLDMGTGSGAIAIAIAHARPDAVVT 136 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLG 184 +D+S AL +A +NA + R + L+SDWF++++G FD+IVSNPPYI + Sbjct: 137 ALDVSEAALAVASANAHRH--KARVECLRSDWFAALDGRQFDLIVSNPPYIVAGDRHLSE 194 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 ++R F+P +L DGLS R I++ + HL+ DG +E GY+Q V + Sbjct: 195 GDLR-FEPIDALSDHADGLSALRIISEHAADHLSDDGWLLMEHGYDQAAAVRGLLAENGF 253 Query: 245 FLVNAFKDYGGNDRV 259 V +++D +RV Sbjct: 254 GEVQSWRDLAQIERV 268 >gi|71274722|ref|ZP_00651010.1| Modification methylase HemK [Xylella fastidiosa Dixon] gi|71899597|ref|ZP_00681752.1| Modification methylase HemK [Xylella fastidiosa Ann-1] gi|71164454|gb|EAO14168.1| Modification methylase HemK [Xylella fastidiosa Dixon] gi|71730639|gb|EAO32715.1| Modification methylase HemK [Xylella fastidiosa Ann-1] Length = 275 Score = 108 bits (271), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 72/210 (34%), Positives = 109/210 (51%), Gaps = 13/210 (6%) Query: 54 ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113 ++G R F+ + + +SS T PR ETE LV+ AL R++ R+ DLGTG+GA+ L Sbjct: 67 LIGRRGFWTLDVIVSSATLIPRAETETLVEQALQ----RLDHASERRVADLGTGSGAIAL 122 Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL---QSDWFSSVEG-LFDVIV 169 A+ E P + + D S AL+IA NA + R + + + +W+ ++ G FD+IV Sbjct: 123 AIACERPQAQVLATDNSAAALDIAARNASAH----RLNHVVFREGNWYEALLGERFDLIV 178 Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY 229 SNPPYI ++R F+P +L G DGL R +A G HL G +E G+ Sbjct: 179 SNPPYIAVTDPHLTQGDLR-FEPPSALISGSDGLDALRILAAGAPAHLRPGGWLVLEHGW 237 Query: 230 NQKVDVVRIFESRKLFLVNAFKDYGGNDRV 259 +Q + + + L V +D DRV Sbjct: 238 DQGAAMRTLLHTAGLVAVATVQDLEARDRV 267 >gi|89900073|ref|YP_522544.1| HemK family modification methylase [Rhodoferax ferrireducens T118] gi|89344810|gb|ABD69013.1| modification methylase, HemK family [Rhodoferax ferrireducens T118] Length = 280 Score = 108 bits (271), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 73/220 (33%), Positives = 107/220 (48%), Gaps = 10/220 (4%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101 + R E + I G ++F+ + L + + PRP+TE LV+ AL + + + Sbjct: 59 VQRRAASEPLAYITGHQEFFGLDLAVDARVLVPRPDTETLVEWAL--DVLQAPTGTAPAV 116 Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 LDLGTG+GA+ LAL P + VD S AL +A++NA G++ +F Q W + + Sbjct: 117 LDLGTGSGAIALALKATRPELRVSAVDYSADALAVARANAQRLGLAVQFS--QGAWLAGL 174 Query: 162 ---EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 + FD IVSNPPY V L+ F+P +L G DGL R I HLN Sbjct: 175 AQPDARFDAIVSNPPY---VAAQDKHLDALTFEPLQALASGADGLDDIRQIITQAPAHLN 231 Query: 219 KDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258 G +E GY+Q V + L V + +D G +R Sbjct: 232 PGGWLLLEHGYDQAAAVRALLLDAGLHDVQSRRDLSGIER 271 >gi|219670828|ref|YP_002461263.1| modification methylase, HemK family [Desulfitobacterium hafniense DCB-2] gi|219541088|gb|ACL22827.1| modification methylase, HemK family [Desulfitobacterium hafniense DCB-2] Length = 285 Score = 108 bits (271), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 79/266 (29%), Positives = 125/266 (46%), Gaps = 12/266 (4%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L + L Q+ ++ + L Q I R + E + I+ ++F + Sbjct: 25 DADLLLGHILSLRREQLYLEREQTLGPEQEAAYQQMISRRARREPLQYIVKHQEFMGLDF 84 Query: 66 TLSSDTFEPRPETELLVDSALAF------SLPRIEKRDVVRILDLGTGTGAVCLALLKES 119 + PR +TE+LV+ L S R + I DL TG+GA+ +++ Sbjct: 85 YVDERVLIPRADTEILVEKVLELKKEWQHSADRGGSEESPHIADLCTGSGALAISIAHFW 144 Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESV 178 P + VG D+S AL++A+ N GV R Q D+ + G +D+IVSNPPY+ Sbjct: 145 PQAEVVGTDLSRDALDVARFNGERLGV--RIQWRQGDFLEPLRGDSWDLIVSNPPYVTQA 202 Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238 L E+ +PR++ GG DGL YR +A L + G+ +EIG+ Q V + Sbjct: 203 EYGELAPELAK-EPRMAFLGGADGLDFYRELAREGRSLLREKGIILMEIGWQQGNSVAEL 261 Query: 239 FESRKLFLVNAFKDYGGNDRVLLFCR 264 F+ + F +D GG DRV +F R Sbjct: 262 FQQQG-FQTQILQDLGGRDRV-VFAR 285 >gi|157412680|ref|YP_001483546.1| putative protein methyltransferase [Prochlorococcus marinus str. MIT 9215] gi|157387255|gb|ABV49960.1| putative protein methyltransferase [Prochlorococcus marinus str. MIT 9215] Length = 289 Score = 108 bits (271), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 68/205 (33%), Positives = 105/205 (51%), Gaps = 9/205 (4%) Query: 57 WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116 WRD ++L +++ PRPETEL+VD + F++ +K + +LGTG+GA+ +AL Sbjct: 84 WRD---LKLKVTNKVLIPRPETELIVD--IVFNIFG-KKSNKFLFAELGTGSGAISIALA 137 Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPP 173 P GV DI ALE+A N + +W+S +E G D+ +SNPP Sbjct: 138 LAYPLSHGVATDIDQNALEVAIRNYRNSSKQSNLKFFCGNWWSPLESFKGKLDLAISNPP 197 Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233 YI S + L EV++F+P+I+L GG DGL H + I L + G +E ++Q Sbjct: 198 YIPSDTYEKLPKEVKNFEPKIALLGGEDGLKHIKEIIQKAPLFLKEKGWLILENHFDQSE 257 Query: 234 DVVRIFESRKLFLVNAFKDYGGNDR 258 V ++ + + KD G R Sbjct: 258 KVKQLLIKNQFTSIEIVKDLSGIGR 282 >gi|304385308|ref|ZP_07367653.1| protein-(glutamine-N5) methyltransferase [Pediococcus acidilactici DSM 20284] gi|304328515|gb|EFL95736.1| protein-(glutamine-N5) methyltransferase [Pediococcus acidilactici DSM 20284] Length = 285 Score = 108 bits (271), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 76/233 (32%), Positives = 119/233 (51%), Gaps = 9/233 (3%) Query: 30 LDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFS 89 LD Q+F + R++ E + I +FY + S PR ETE LV+ L + Sbjct: 52 LDQWQQF--QKDVQRAVNGEPVQYITNKANFYGREFYVDSRVLIPRVETEELVEHILN-A 108 Query: 90 LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 P++ + +R+LD+GTG+G + + L E P ++ VDI+ +AL +A+ NA Sbjct: 109 HPQLNQ--PLRVLDIGTGSGNIAITLKLERPDWQVTAVDIASEALAVAQQNAHQQEAV-- 164 Query: 150 FDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208 D Q F +V+G FD+IVSNPPYI D + V +++P +L DGL Y+ Sbjct: 165 VDFRQGSLFDAVKGERFDIIVSNPPYIAENERDVMDQSVIEYEPDKALFAPDDGLFWYKQ 224 Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIF-ESRKLFLVNAFKDYGGNDRVL 260 I ++ HL G E GY+Q + + F E + V+ +D G+DR+L Sbjct: 225 IGRQLANHLTNAGQLWCEFGYHQGAKLKQYFSELPGVKDVDVLQDLSGHDRIL 277 >gi|218247699|ref|YP_002373070.1| HemK family modification methylase [Cyanothece sp. PCC 8801] gi|218168177|gb|ACK66914.1| modification methylase, HemK family [Cyanothece sp. PCC 8801] Length = 300 Score = 108 bits (271), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 72/214 (33%), Positives = 108/214 (50%), Gaps = 11/214 (5%) Query: 57 WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV--RILDLGTGTGAVCLA 114 WR+F L +S PRPETEL++D A+ ++ + D+ +DLGTG+GA+ Sbjct: 90 WRNF---SLKVSPSVLIPRPETELIIDFAVK-AVKDSPRNDLALGHWVDLGTGSGAIACG 145 Query: 115 LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSN 171 L + P VD S AL IA+ NA G S R + Q W++ +E G ++SN Sbjct: 146 LAQAFPKAIIHAVDSSEAALAIAQENANNLGFSSRINFYQGSWWTPLESLKGKISGVLSN 205 Query: 172 PPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231 PPYI + ++ L EVRD +P ++LDGG DGL R + + +L G+ VE+ Q Sbjct: 206 PPYIPTKMLSALAPEVRDHEPYLALDGGEDGLDSLRYLINSSPDYLYSGGIWLVEMMAGQ 265 Query: 232 KVDVVRIFESRKLFL-VNAFKDYGGNDR-VLLFC 263 V ++ + + D G DR L +C Sbjct: 266 GEKVAQLLTDSTAYKDIKILSDLAGIDRFALAYC 299 >gi|319942225|ref|ZP_08016541.1| N5-glutamine methyltransferase [Sutterella wadsworthensis 3_1_45B] gi|319804278|gb|EFW01170.1| N5-glutamine methyltransferase [Sutterella wadsworthensis 3_1_45B] Length = 276 Score = 108 bits (271), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 72/213 (33%), Positives = 108/213 (50%), Gaps = 13/213 (6%) Query: 54 ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113 + G ++F+ ++ PRP+TE+LV+ AL ++LDLGTG+G + + Sbjct: 73 LTGSQEFFGRHFHVTDAVLIPRPDTEVLVEQALLVVAGN------PKVLDLGTGSGCIGI 126 Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSN 171 L E + D S ALEIA+ NA ++ + + + W+ ++ FD+IVSN Sbjct: 127 TLALEISGAQVTATDASEAALEIARGNAAE--LAAKVEFREGFWWDALVPNSQFDLIVSN 184 Query: 172 PPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231 PPYI D L +++P +L GI+GL + IADG HL G +E GY+Q Sbjct: 185 PPYIRP---DDDHLRNLEYEPLQALTDGINGLECLQAIADGAIAHLTPGGWLLLEHGYDQ 241 Query: 232 KVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 +V + E V KDYGGNDRV + R Sbjct: 242 GAEVRAMLEQAGFAAVRTKKDYGGNDRVTMGRR 274 >gi|253580115|ref|ZP_04857382.1| modification methylase [Ruminococcus sp. 5_1_39B_FAA] gi|251848634|gb|EES76597.1| modification methylase [Ruminococcus sp. 5_1_39BFAA] Length = 321 Score = 108 bits (271), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 89/291 (30%), Positives = 133/291 (45%), Gaps = 43/291 (14%) Query: 6 DSHSFLCRVTGLS-SHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 D+ L VTG S ++ +SV + +L I R H + + F Sbjct: 28 DAWLLLEYVTGKSRAYYFAYGEESVTESVAERYL-ELISRRAGHIPLQHLTHQAFFMGHE 86 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR---ILDLGTGTGAVCLALLKESPF 121 + + PR +TE LV+SAL E V+ ILD+ TG+G + +++LKE Sbjct: 87 FYVDKNVLVPRQDTETLVESAL-------ECMKAVKNPYILDMCTGSGCILISILKERAD 139 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL----------------- 164 G GVD+S +AL++A NA T V+E + +QS+ FS ++ + Sbjct: 140 AHGTGVDLSDEALKVAVRNARTLEVAEHAEFVQSNLFSEMQNIVYGTEYMKRTAVKDTVK 199 Query: 165 --------------FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210 +D+I+SNPPYI + ++ L EV+ DPR++LDG DGL YR I Sbjct: 200 MTECENSNRNYSRAYDMIISNPPYIPTAEIEDLMDEVKLHDPRMALDGMEDGLYFYRAIT 259 Query: 211 DGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 HL G EIG +Q DV + K + +D G DRV+L Sbjct: 260 KQAQDHLVPGGWLLYEIGCSQGEDVAALLRKYKFEDIEIRQDLAGLDRVVL 310 >gi|332526536|ref|ZP_08402648.1| hemK protein [Rubrivivax benzoatilyticus JA2] gi|332110804|gb|EGJ10981.1| hemK protein [Rubrivivax benzoatilyticus JA2] Length = 269 Score = 108 bits (271), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 69/206 (33%), Positives = 100/206 (48%), Gaps = 10/206 (4%) Query: 54 ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113 ++G R+F+ + L ++ D PRP+TE+LVD AL P R+ DLGTG+GA+ L Sbjct: 67 LVGEREFHGLTLRVTPDVLVPRPDTEVLVDWALELLPPGAP----ARVADLGTGSGAIAL 122 Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNP 172 A+ P D S +AL +A NA G+ F + +W+S + G FD+++SNP Sbjct: 123 AVKNARPQASLTATDRSAEALAVAADNAGRLGLEIEF--VHGEWWSPLAGRRFDLVLSNP 180 Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232 PYI L+ +PR +L DGL R I HL G +E GY+Q Sbjct: 181 PYIAGADPHLTALQ---HEPRGALTPEGDGLDALRAIVSAAQAHLEPGGWLLLEHGYDQA 237 Query: 233 VDVVRIFESRKLFLVNAFKDYGGNDR 258 V + V+ +D GG R Sbjct: 238 DAVQALLAGAGFTQVSTRRDLGGQPR 263 >gi|325971907|ref|YP_004248098.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Spirochaeta sp. Buddy] gi|324027145|gb|ADY13904.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Spirochaeta sp. Buddy] Length = 286 Score = 108 bits (270), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 85/259 (32%), Positives = 127/259 (49%), Gaps = 13/259 (5%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L +VTG + I+ D VL D Q LT+ L H+ + ILG R+FY Sbjct: 28 DARLLLQQVTGFDQAKQILFFDKVLTDAQLDSLTSLRKVRLSHKPMAYILGRREFYGRDF 87 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 + PR +TE L+++ LAF+ K D I+D+ TG+G + + L E G Sbjct: 88 QVDERVLIPRSDTETLIEAVLAFA---KNKTDTPSIIDVCTGSGCIGITLALE----LGS 140 Query: 126 GV---DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182 V D+S AL +A+ NA VS L D S + +D+IVSNPPY+ + D Sbjct: 141 AVTLTDLSEGALAVARENA-RRLVSRPLTFLHGDLLSPTDKKYDIIVSNPPYLTASWCDE 199 Query: 183 LGLEVRDFDPRISLDG-GIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 + EV+ ++PR++L+G +DGL R + HL G +E Y Q V ++ S Sbjct: 200 VAFEVQ-WEPRLALEGFSLDGLELIRALVAQSLDHLAAGGALFLECDYRQAETVKQLLVS 258 Query: 242 RKLFLVNAFKDYGGNDRVL 260 + V KD G +RV+ Sbjct: 259 SRFTNVRIEKDLAGRERVV 277 >gi|260891993|ref|YP_003238090.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Ammonifex degensii KC4] gi|260864134|gb|ACX51240.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Ammonifex degensii KC4] Length = 287 Score = 108 bits (270), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 67/203 (33%), Positives = 107/203 (52%), Gaps = 10/203 (4%) Query: 44 RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103 R L E + ++G ++F+ + L ++ PRPETELLV++ L +++ + ++D Sbjct: 63 RRLAGEPLAYLIGKKEFWGLELEVTPAVLVPRPETELLVETGLE----KVKGKGSPILVD 118 Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS---- 159 +GTG+GAV ++ P + + +DIS +AL A+ NA +GV ER + D S Sbjct: 119 VGTGSGAVAVSWAVSLPQARLLALDISPEALACAQRNARRHGVEERITFMAGDLLSPLKE 178 Query: 160 -SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 V G DV+ +N PYI + L EVR +PR +LDGG DGL+ YR + + L Sbjct: 179 TPVAGKVDVVGANLPYIPRAFLPALSREVRR-EPRQALDGGTDGLAFYRRLVLQAKQVLR 237 Query: 219 KDGLCSVEIGYNQKVDVVRIFES 241 G EI Q+ + +F+ Sbjct: 238 PGGYLLCEIAPWQRSGALELFDE 260 >gi|322421624|ref|YP_004200847.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Geobacter sp. M18] gi|320128011|gb|ADW15571.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Geobacter sp. M18] Length = 286 Score = 108 bits (270), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 80/238 (33%), Positives = 120/238 (50%), Gaps = 11/238 (4%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 ++ LC L + ++ D L D + + + R K E + ILG ++F + Sbjct: 32 EAEWMLCEALSLDRVGLYLNFDKPLSDAELAAYRSMVARRGKREPLQYILGTQEFMGLEF 91 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR-ILDLGTGTGAVCLALLKESPFFKG 124 ++ PR +TE+LV A +++ V R +LD+G G+G V +AL K P + Sbjct: 92 QVTPAVLIPRHDTEVLVTEA-------VKRGAVARSVLDIGAGSGCVAVALAKALPPAEI 144 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCL 183 VD+S +ALE+A+ NA NG + F Q F G FD++VSNPPYI + + L Sbjct: 145 CSVDVSGEALEVARGNAERNGATVHF--FQGSLFEPFAGRHFDMVVSNPPYIPNYELATL 202 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 EVR F+P +LDGG DGL YR I +LN G E+G Q V+ + +S Sbjct: 203 QAEVRGFEPMGALDGGGDGLDFYRRIISDAPGYLNPGGWLIFEVGAGQAPQVLGLLQS 260 >gi|126695681|ref|YP_001090567.1| putative protein methyltransferase [Prochlorococcus marinus str. MIT 9301] gi|126542724|gb|ABO16966.1| putative protein methyltransferase [Prochlorococcus marinus str. MIT 9301] Length = 289 Score = 108 bits (270), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 73/235 (31%), Positives = 119/235 (50%), Gaps = 17/235 (7%) Query: 27 DSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL 86 +SV DD +++S + + I WRD ++L +++ PR ETEL+VD + Sbjct: 62 ESVWDDH--------LLKSCPIQYLCGITFWRD---LKLKVTNKVLIPRAETELIVD--I 108 Query: 87 AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146 F++ + +K + + +LGTG+GA+ +AL P + V DI ALEIA N + + Sbjct: 109 VFNIFQ-KKSEKLFFAELGTGSGAISIALALAYPLSEVVATDIDQDALEIATKNFINSSK 167 Query: 147 SERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203 +W+S +E G D+ +SNPPYI + L EV++F+P+++L GG DGL Sbjct: 168 QSNLKFYCGNWWSPLECFKGKIDLAISNPPYIPRDTYEKLPKEVKNFEPKVALLGGEDGL 227 Query: 204 SHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258 H+R I L +G +E ++Q V ++ K + KD G R Sbjct: 228 EHFREIIQKAPLFLKDNGWLILENHFDQSEKVKQLLIKNKFTSIEIVKDLSGIGR 282 >gi|117617744|ref|YP_857648.1| protein methyltransferase HemK [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117559151|gb|ABK36099.1| protein methyltransferase HemK [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 282 Score = 108 bits (270), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 88/263 (33%), Positives = 126/263 (47%), Gaps = 15/263 (5%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ + LC + ++ P+ LD Q L + R L E I ++G R+F+++ L Sbjct: 23 DADALLCHLLECRRSYLMTWPERELDAAQLATLQGWLERRLNGEPIAHLIGEREFWSLPL 82 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 +S T PRP+TE+LV+ AL LP +LDLGTGTGA+ LAL E P Sbjct: 83 KVSPATLIPRPDTEVLVEQALG-RLP----AGPCAVLDLGTGTGAIALALKSERPDADVW 137 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWF-------SSVEGLFDVIVSNPPYIESV 178 VD A +A++N+ G+ + WF SS F +IVSNPPYI+ Sbjct: 138 AVDRMPAAAALARANSAALGLP--IEVRDGSWFEPLVEPSSSKAPRFAMIVSNPPYIDGA 195 Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238 +VR F+PR +L GL+ R I G HL G +E G+ Q V ++ Sbjct: 196 DPHLDEGDVR-FEPRSALVADEQGLADIRLIVAGAPAHLLPGGWLLLEHGWQQGEAVRQL 254 Query: 239 FESRKLFLVNAFKDYGGNDRVLL 261 + V +DYG N+RV L Sbjct: 255 LLQQGYLQVETVRDYGDNERVTL 277 >gi|149183884|ref|ZP_01862275.1| modification methylase, HemK family protein [Bacillus sp. SG-1] gi|148848403|gb|EDL62662.1| modification methylase, HemK family protein [Bacillus sp. SG-1] Length = 289 Score = 108 bits (270), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 80/253 (31%), Positives = 121/253 (47%), Gaps = 19/253 (7%) Query: 21 QVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETEL 80 Q++ + VL+D+ + I ++ I I+G+ +FY + +++ PRPETE Sbjct: 42 QLLANQRLVLEDKVKLEFARGITAHIQGTPIQHIIGFEEFYGRKFSVNEHVLIPRPETEE 101 Query: 81 LVDSALAFSLPRIEKR----DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136 LV ++L +I K +R D+GTG+GA+ + + E P + VDIS AL + Sbjct: 102 LV----YYTLEKIRKHFSADGELRFADIGTGSGAIAVTMKLEKPELFVMAVDISANALHV 157 Query: 137 AKSNAVTNGVSERFDTLQSDWFS---SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPR 193 A+ NA GVS F L+ D S + DV+VSNPPYI +D L V+D +P Sbjct: 158 ARKNADNLGVSVEF--LEGDLLEPLISRDEKLDVLVSNPPYIPLGELDSLSEVVKDHEPH 215 Query: 194 ISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL---VNAF 250 +L GG GL Y+ + + + L EIG Q V + R F Sbjct: 216 SALFGGESGLEFYQRFMEELPLVMKDRCLIGFEIGAGQGEAVAGML--RGAFPEAHTEII 273 Query: 251 KDYGGNDRVLLFC 263 D G DR ++FC Sbjct: 274 HDINGKDR-MVFC 285 >gi|148555444|ref|YP_001263026.1| HemK family modification methylase [Sphingomonas wittichii RW1] gi|148500634|gb|ABQ68888.1| modification methylase, HemK family [Sphingomonas wittichii RW1] Length = 274 Score = 108 bits (270), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 83/249 (33%), Positives = 130/249 (52%), Gaps = 11/249 (4%) Query: 17 LSSHQVIVDPDSVL----DDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTF 72 L +H + V D++L DD + R + HE + I+G RDF+ + L + Sbjct: 30 LMAHALGVSRDAMLLGRLDDPAPAGFAPLLARRVAHEPVAYIVGERDFWTISLKVGPGVL 89 Query: 73 EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCK 132 PRP++E L+++A+ + RILDLG G+GA+ LA L + P G+GVD S Sbjct: 90 IPRPDSETLIEAAVG----HFGAKGPARILDLGVGSGALLLAALAQWPAASGIGVDRSAA 145 Query: 133 ALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDP 192 A IA+ NA G++ + + DW ++ FD+++ NPPY+ES + L +V + +P Sbjct: 146 AAAIARDNAARLGLAGQAEIRLGDWAEGIDERFDLLLCNPPYVESGAI--LAPDVAEHEP 203 Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKD 252 +L G DGL YR +A + L GL +VEIG Q V+ +F +R + +D Sbjct: 204 ASALFAGPDGLDDYRRLAPMIGGLLAAGGLAAVEIGAEQGDAVIALF-ARHGLAGSVRRD 262 Query: 253 YGGNDRVLL 261 G DR +L Sbjct: 263 LAGRDRAIL 271 >gi|255065352|ref|ZP_05317207.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Neisseria sicca ATCC 29256] gi|255050177|gb|EET45641.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Neisseria sicca ATCC 29256] Length = 275 Score = 108 bits (269), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 82/225 (36%), Positives = 110/225 (48%), Gaps = 15/225 (6%) Query: 43 VRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRIL 102 R LK E + ILG R+FY + D PRPETE LV++ + LP + + Sbjct: 53 ARRLKGEPMAYILGGREFYGRWFEVGPDVLIPRPETEHLVEAVIGH-LPANGQ-----VW 106 Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF---- 158 DLGTG+GAV + + E DIS AL IA+ NA T G R + WF Sbjct: 107 DLGTGSGAVAVTVALERKDAAVRASDISGGALAIARKNAETLGA--RVEFALGSWFETDK 164 Query: 159 --SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216 S + FDVIVSNPPYIE+ ++R F+P+ +L DGLS R +A Sbjct: 165 TSSEDKHRFDVIVSNPPYIEAGDEHLSQGDLR-FEPQTALTDFADGLSCIRELAQRAPEF 223 Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 L + G +E GYNQ V +I + V+ +D G DR+ L Sbjct: 224 LKEGGWLLLEHGYNQGTAVRQILTANGFAEVSTQQDLAGLDRLTL 268 >gi|146302781|ref|YP_001197372.1| HemK family modification methylase [Flavobacterium johnsoniae UW101] gi|146157199|gb|ABQ08053.1| modification methylase, HemK family [Flavobacterium johnsoniae UW101] Length = 284 Score = 108 bits (269), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 73/234 (31%), Positives = 127/234 (54%), Gaps = 11/234 (4%) Query: 33 RQRFFLTNAIVRSLKHE-SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLP 91 + F + ++++ LK E I +LG +FY + ++ + PRPETE LV+ ++ + Sbjct: 52 EEDFVVWDSLLAQLKKEVPIQYLLGKTNFYGLDFEVNENVLIPRPETEELVEWIISEN-K 110 Query: 92 RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF- 150 I++++ ++ILD+GTG+G + ++L K P +D+S KA+E AK NA+ N V+ F Sbjct: 111 GIDRKEKIKILDIGTGSGCIAVSLAKNLPNADVYAIDVSKKAIETAKRNAIRNDVNVTFI 170 Query: 151 --DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL--DGGIDGLSHY 206 D LQ++ ++ +DVIVSNPPYI ++ + + V D++P ++L D D L Y Sbjct: 171 FQDILQAE---ELKCKYDVIVSNPPYIRNLEKEEIKKNVLDYEPHLALFVDDN-DALLFY 226 Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 R IA +L G EI +++ + ++ KD NDR++ Sbjct: 227 RKIASLAQNNLLAKGQLYFEINQYLGKEMIELLGKMDFINIDLRKDIYDNDRMI 280 >gi|149372324|ref|ZP_01891512.1| putative protoporphyrinogen oxidase [unidentified eubacterium SCB49] gi|149354714|gb|EDM43277.1| putative protoporphyrinogen oxidase [unidentified eubacterium SCB49] Length = 282 Score = 108 bits (269), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 71/192 (36%), Positives = 98/192 (51%), Gaps = 4/192 (2%) Query: 38 LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97 ++ AI R L HE I I+G FY + + T PRPETE LV+ L + D Sbjct: 58 ISEAIQRLLLHEPIQYIIGETAFYGLPFKVDRHTLIPRPETEELVEWIL---VEAANNED 114 Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 ILD+GTG+G + ++L KE + DIS AL++A+ NA+TN V RF + Sbjct: 115 DKEILDIGTGSGCIAVSLAKEFDKAQVSAYDISEGALKVAQENALTNKVEVRFKNVDILA 174 Query: 158 FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL-DGGIDGLSHYRTIADGVSRH 216 +E FDVIVSNPPY+ + + V + +P +L D L YR IA + Sbjct: 175 LDELEQSFDVIVSNPPYVRDLEKKMMQANVLEHEPATALFVSDTDPLIFYRKIAALAFKS 234 Query: 217 LNKDGLCSVEIG 228 L K+GL EI Sbjct: 235 LKKNGLLYFEIN 246 >gi|291561382|emb|CBL40181.1| protein-(glutamine-N5) methyltransferase, release factor-specific [butyrate-producing bacterium SS3/4] Length = 387 Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 81/257 (31%), Positives = 123/257 (47%), Gaps = 53/257 (20%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTG 109 + +ILG ++F + ++ PR +TE LV+ L E++D + ILD+ TG+G Sbjct: 128 LQQILGQQEFMGLTFFVNEHVLIPRQDTETLVELVLN------EQKDKNISILDMCTGSG 181 Query: 110 AVCLALLKESPFFKGVGVDISCKALEIAKSNA--------VTN-GVSERFDTLQ------ 154 + ++L K + G DIS +AL++AK N+ V N VS R + +Q Sbjct: 182 CIAVSLKKLGGYACVEGADISEEALKVAKRNSEEILENSDVNNDAVSSRTEQIQNCTNLT 241 Query: 155 -----------------------------SDWFSSVEGL--FDVIVSNPPYIESVIVDCL 183 SD FSS F+VIVSNPPY+ S +++ L Sbjct: 242 NNQNKQDNSEERMVSEVRRGSQTGVTFRHSDMFSSFRETEQFNVIVSNPPYVPSAVIEEL 301 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 EVRD +PR +LDG DGL YR +A+ ++HL G EIGY+Q + V + ++ Sbjct: 302 EPEVRDHEPRGALDGTADGLYFYRILAEECAKHLTPGGHVYFEIGYDQGMAVKELLDNHG 361 Query: 244 LFLVNAFKDYGGNDRVL 260 +D G DRV+ Sbjct: 362 FKDTRVIQDLTGKDRVV 378 >gi|238023220|ref|ZP_04603646.1| hypothetical protein GCWU000324_03147 [Kingella oralis ATCC 51147] gi|237865603|gb|EEP66743.1| hypothetical protein GCWU000324_03147 [Kingella oralis ATCC 51147] Length = 275 Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 82/260 (31%), Positives = 121/260 (46%), Gaps = 19/260 (7%) Query: 10 FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69 L +TG ++ Q+I L Q L I R E I ++G R+FY +S Sbjct: 21 LLQHITGYTASQLITRDREPLPKDQADQLHRLIARRSAGEPIAYLIGTREFYGRAFVVSP 80 Query: 70 DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129 PRPETE L+++AL R+ + V + DLGTG+G + ++ E P + DI Sbjct: 81 AVLIPRPETEHLLEAALQ----RLPENGV--LWDLGTGSGIIAVSAKCERPDARVFASDI 134 Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSS------VEGLFDVIVSNPPYIESVIVDCL 183 S +AL +A+ NA F Q WF++ + +I SNPPYIE+ D Sbjct: 135 SAEALAVAQQNAAAWCAPVSF--AQGAWFAANQVFRLPQHSVHIIASNPPYIEA---DDP 189 Query: 184 GLEVRD--FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 L+ D ++P +L DGL+H R IA +L + G +E GY+Q V I Sbjct: 190 HLQQGDLRYEPPAALTDFADGLAHIRHIAQHAPAYLRRHGWLLLEHGYDQGQAVRDILAR 249 Query: 242 RKLFLVNAFKDYGGNDRVLL 261 + +D+ G DRV L Sbjct: 250 FGFCQIETQQDWAGLDRVTL 269 >gi|302390588|ref|YP_003826409.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Thermosediminibacter oceani DSM 16646] gi|302201216|gb|ADL08786.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Thermosediminibacter oceani DSM 16646] Length = 290 Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 79/263 (30%), Positives = 126/263 (47%), Gaps = 17/263 (6%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L V G+ + + P+ L + + + + I G ++F+ + Sbjct: 25 DAEVILANVLGVRRIDLFIHPERRLCAEEIRTYRALVEKRSSRVPVAYITGSKEFFTLDF 84 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 + PRPETE LV+ L RI ++++L G+GAV +++ FFK Sbjct: 85 HVREGVLIPRPETEFLVEEILR----RISWVTKPKVVELCCGSGAVAVSVA----FFKKD 136 Query: 126 GV----DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIES 177 V DIS A ++ NAV +GV +R L+ D + E G FDV+ +NPPYI S Sbjct: 137 AVVYASDISETAGDVTLLNAVKHGVEDRVLFLKGDLWEPFEAEGLGDFDVVAANPPYIPS 196 Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237 ++ L +V+ ++PR++LDGG DGL YR I G R L G +E G +Q + Sbjct: 197 GEIENLPEDVK-YEPRVALDGGPDGLKFYRRIIAGAPRFLKPGGSIVLEFGKDQAGQIAD 255 Query: 238 IFESRKLFLVNAFKDYGGNDRVL 260 + + + KDY G +RV+ Sbjct: 256 LLKRAGFGGIKILKDYAGLERVI 278 >gi|32491093|ref|NP_871347.1| hypothetical protein WGLp344 [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] gi|25166300|dbj|BAC24490.1| hemK [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] Length = 281 Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 76/264 (28%), Positives = 139/264 (52%), Gaps = 20/264 (7%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 ++++S L V + S ++I+ ++ L Q + L N ++R E I ++ +F++ Sbjct: 25 SIKESELLLKHVLRVDSKKIILHGENYLTKNQYYKLKNLLIRRKLGEPISYLIKSHEFWS 84 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 +++ +S F PR +TE L+++AL+ L + RIL+LG+G+G + L+L KE+P + Sbjct: 85 IKIKISCGIFIPRHDTECLIETALSLPL-----KKESRILELGSGSGVISLSLGKENPKW 139 Query: 123 KGVGVDISCKALEIAKSNA-VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181 G+D + K++ +++ NA + N + +F + + + ++ +I++NPPYI+ Sbjct: 140 IITGIDKNKKSIFLSRKNAKMLNINNVKFKKINWKYLKD-KKIYSMIITNPPYIKKN-DP 197 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 CL F+P+ +L G DGL + I + L + G VE G+ Q DV Sbjct: 198 CLLKGDLKFEPKSALISGRDGLKDIKIICKISKKFLKRKGYLLVEHGFQQGEDV------ 251 Query: 242 RKLFLVNAFK------DYGGNDRV 259 R LFL N +K DY +RV Sbjct: 252 RNLFLSNGYKSVCTCFDYTRKERV 275 >gi|293375559|ref|ZP_06621833.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Turicibacter sanguinis PC909] gi|325836756|ref|ZP_08166223.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Turicibacter sp. HGF1] gi|292645776|gb|EFF63812.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Turicibacter sanguinis PC909] gi|325491134|gb|EGC93423.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Turicibacter sp. HGF1] Length = 283 Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 80/264 (30%), Positives = 130/264 (49%), Gaps = 18/264 (6%) Query: 10 FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHE-SIHRILGWRDFYNVRLTLS 68 L VTG S++++ D + + Q ++ ++ + I+G+ F+ + ++ Sbjct: 28 LLMHVTGKESYEILADMNMEVPQEQVEEFERSVKTYVEQNIPVQHIMGYETFFGHKFIVN 87 Query: 69 SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128 D PR ETE LV + L+ + + V+++D+GTG+GA+ + L E P + + Sbjct: 88 DDVLIPRFETEELVANVLS-TYDDVFDGAAVKLVDVGTGSGAIGVTLAVEEPNMEVTVTE 146 Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGL-FDVIVSNPPYIE-SVIVDCLG 184 +S ALE+AK NA G + F Q D + GL FD++VSNPPYI + VD L Sbjct: 147 LSEAALEVAKKNAANLGANVTF--YQGDMLQPLIERGLKFDILVSNPPYIPLTEDVDPL- 203 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 V+D +P ++L GG DGL YR I + +N+ + + E YN K + + K Sbjct: 204 --VKDNEPHLALFGGEDGLKFYRQILKDAHKVVNEKNIIAFEHAYNHKEAMAELV---KQ 258 Query: 245 FLVNA----FKDYGGNDRVLLFCR 264 NA KD G DR+ + Sbjct: 259 HFPNAEFETLKDLNGKDRMTIIIN 282 >gi|309390219|gb|ADO78099.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Halanaerobium praevalens DSM 2228] Length = 289 Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 75/260 (28%), Positives = 126/260 (48%), Gaps = 10/260 (3%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ + + + + V D L R+ I + + + I+ ++F ++ Sbjct: 25 DAEVLMADLLDMERINLYVKYDYPLKSREIDKYREMIKKRAQRIPVAYIIQKKEFMSLEF 84 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 + PRP+TE LV+ + + R + +I+D+ TG+GA+ ++L K V Sbjct: 85 KVEPGVLIPRPDTENLVEKVIKYC--RQQGLKTPQIIDVCTGSGAIAVSLAHYLQKAKVV 142 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS-----SVEGLFDVIVSNPPYIESVIV 180 G DIS AL+IA+ N + ++ER L+SD ++G+ D++VSNPPYI + Sbjct: 143 GTDISNSALKIARQNMKKHDLTERMSILKSDLLKEFIKREIKGI-DILVSNPPYITEAEM 201 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 + L EV+ +P+ +L G DGL YR + + L G +EIGY Q V IF Sbjct: 202 ETLAPEVKK-EPKKALVAGKDGLDFYRRLIPEAEKVLKNGGKLFLEIGYQQAAAVREIFG 260 Query: 241 SRKLFLVNAFKDYGGNDRVL 260 + + KDY NDR++ Sbjct: 261 AN-WSEIEVEKDYSENDRIV 279 >gi|217077796|ref|YP_002335514.1| methyltransferase [Thermosipho africanus TCF52B] gi|217037651|gb|ACJ76173.1| methyltransferase [Thermosipho africanus TCF52B] Length = 261 Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 84/259 (32%), Positives = 133/259 (51%), Gaps = 24/259 (9%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 +++ + ++TG + ++ P+ ++ F L N + L + +L + FY Sbjct: 19 EAYLVIKKITGKTKEYLVAHPEYQFCEQSFFDLLN---KRLVGFPLSYLLNEKSFYKHNF 75 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 + PRPETELLV++AL I+K + ++ ++G G+GAV +++L E+ G Sbjct: 76 YVEEGVLIPRPETELLVENALKV----IDKEKIKKVAEIGVGSGAVIISILLETNCV-GF 130 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFD---VIVSNPPYIESVIVDC 182 G DIS KALEIAK NA V +R D + + +D +IVSNPPY+++ Sbjct: 131 GTDISKKALEIAKKNARKFRVIDRLDLRLGKFLEPFKNEYDEIELIVSNPPYVKN--NSN 188 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 L EV F+P+ +L GG DGL YR S LN + +EIG++Q F + Sbjct: 189 LQKEVM-FEPKEALFGGEDGLDFYREFLS--SYDLN-GKIVVMEIGHDQG----DFFRKK 240 Query: 243 KLFLVNAFKDYGGNDRVLL 261 N KDY GNDR+++ Sbjct: 241 DW---NVIKDYSGNDRIVI 256 >gi|307244043|ref|ZP_07526162.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Peptostreptococcus stomatis DSM 17678] gi|306492567|gb|EFM64601.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Peptostreptococcus stomatis DSM 17678] Length = 300 Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 79/274 (28%), Positives = 133/274 (48%), Gaps = 21/274 (7%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D LC + G +++++ LD + + I + L I I+ ++F + Sbjct: 24 DVEIILCHILGWDRVKLMINYGQDLDSDKMSIFEDMIAKRLDQMPIAYIINKKEFMGLDF 83 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR---ILDLGTGTGAVCLA---LLKES 119 + PRP+TELLV+ L S+ +E R +LD+ TG+GA+ L+ L K+ Sbjct: 84 YVDERVLIPRPDTELLVED-LVESIGEMESTKQARDINVLDMCTGSGAIILSGASLWKDR 142 Query: 120 P----------FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFD 166 +GVDIS ALE+A N + G+ + ++SD F+++ G D Sbjct: 143 AKEDSGKAKDGTVNFIGVDISKSALEVATINRKSFGL-DTVKLIESDLFTNLGDYRGCLD 201 Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE 226 +IVSNPPYIE +++ L +V+D++PR++L GG DG+ Y I + +L G E Sbjct: 202 IIVSNPPYIEDQVIEGLERDVKDYEPRLALAGGNDGMDFYNRIIEDAYDYLKLGGKLVFE 261 Query: 227 IGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 G++Q +++ KD G DR++ Sbjct: 262 SGHDQAEKILKKMAQVGYTKAYTKKDIQGFDRLV 295 >gi|187930215|ref|YP_001900702.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Ralstonia pickettii 12J] gi|187727105|gb|ACD28270.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Ralstonia pickettii 12J] Length = 300 Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 78/258 (30%), Positives = 118/258 (45%), Gaps = 11/258 (4%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 ++ + VTGLS Q+I +D R ++ R L E + +LG R+F+ Sbjct: 31 EARMLVSHVTGLSRVQLITQDTCAIDVAARARISELAARRLAGEPMAYLLGEREFFGRTF 90 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 ++ PRP+TELLV+ A L +E+ D +LD+GTG+G + + + + Sbjct: 91 KVTPAVLIPRPDTELLVEQA----LDHLEECDAPAVLDMGTGSGIIAITIALARRDARVW 146 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-----LFDVIVSNPPYIESVIV 180 D S AL +A NA G + T DW+ ++ G FD+I SNPPYI + Sbjct: 147 ATDASADALAVAIDNAKALGATN-VQTALGDWYGALAGTDAPPAFDLIASNPPYIAATDA 205 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 ++R F+P +L DGL H +I G L G VE GY+Q V + Sbjct: 206 HLDQGDLR-FEPASALTDHDDGLRHLCSIVAGAPARLVSGGWLLVEHGYDQGEPVRALLG 264 Query: 241 SRKLFLVNAFKDYGGNDR 258 V +D G+DR Sbjct: 265 GAGFANVFTAQDLAGHDR 282 >gi|299537973|ref|ZP_07051259.1| HemK-like protein [Lysinibacillus fusiformis ZC1] gi|298726555|gb|EFI67144.1| HemK-like protein [Lysinibacillus fusiformis ZC1] Length = 285 Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 78/280 (27%), Positives = 126/280 (45%), Gaps = 20/280 (7%) Query: 1 MQALRDSHSFLC--------------RVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSL 46 M+AL + SFL V G S +V++ L Q+ I Sbjct: 7 MEALEWASSFLVDNGCEQTAARIVMQHVLGTSYGEVMLHLQDELTAAQQMKFIELIEEHA 66 Query: 47 KHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGT 106 + +G+ +FY + PRPETE LV + LP++ + +++ D+GT Sbjct: 67 NGRPVQYCVGYEEFYGRSFLVDESVLIPRPETEELVLGTIN-RLPKLFTKQTLKLADIGT 125 Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LF 165 G+GA+ +++ E P + D+S AL A+ NA + D D + G F Sbjct: 126 GSGAIAISMKLECPALSVIATDLSEAALATAQKNA--KRLEADIDFRLGDLADPLAGEKF 183 Query: 166 DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225 D+++SNPPYI + V + +P +L DGL YR +A+ + ++N+ L + Sbjct: 184 DIVLSNPPYIAFNEAQAMSSVVLEHEPHSALFAEEDGLMLYRKLAEQLPAYMNRPALIGL 243 Query: 226 EIGYNQKVDVVRIFE-SRKLFLVNAFKDYGGNDRVLLFCR 264 EIGY Q V + F+ S V+ KD G R ++FC Sbjct: 244 EIGYTQGEKVAKFFQDSFPQATVSVEKDINGKPR-MIFCE 282 >gi|317132919|ref|YP_004092233.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Ethanoligenens harbinense YUAN-3] gi|315470898|gb|ADU27502.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Ethanoligenens harbinense YUAN-3] Length = 287 Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 70/223 (31%), Positives = 112/223 (50%), Gaps = 7/223 (3%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101 + R E + +LG +F + + PRPETELLV++A+A+ + R+ Sbjct: 59 VERRAAGEPLQYLLGEWEFMGLPFKVGPGVLIPRPETELLVEAAIAYLNVQPPDAAAPRL 118 Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 L+L G+G V ++ + + + V ++ S AL ++N +G+ +R ++ D Sbjct: 119 LELCAGSGCVAISAARAT-GCEAVCLEYSADALGYLRANIALHGLEDRVRAVEGDMLLPP 177 Query: 162 EGL----FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217 G+ FDV++ NPPYI + + L EVR +P ++LDGG DGL YR + V L Sbjct: 178 RGVLSGSFDVLLCNPPYIRTEELPALQAEVRR-EPVLALDGGPDGLRFYRALCAWVP-VL 235 Query: 218 NKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 GL + E+G Q DV R+ E L V DY G R++ Sbjct: 236 RPGGLLACEVGMGQAEDVARLLEDAGLCNVAVRNDYAGIGRMV 278 >gi|213617487|ref|ZP_03372313.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] Length = 262 Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 86/236 (36%), Positives = 121/236 (51%), Gaps = 8/236 (3%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 RD+ L VTG ++ ++ L D Q+ L + R + E I + G R+F+++ Sbjct: 22 RDAEILLEYVTGKRRTYIMAFGETPLTDVQQQQLAELLQRRKQGEPIAYLTGLREFWSLP 81 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L +S T PRP+TE LV+ ALA LP RILDLGTGTGA+ LAL E P + Sbjct: 82 LFVSPATLIPRPDTECLVEQALA-RLP----VKTCRILDLGTGTGAIALALACERPDCEV 136 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183 VD A+ +A NA + LQS WFS++ G FD+IVSNPPYI++ Sbjct: 137 TAVDRMPDAVALAIRNAEHLAI-RNVRILQSCWFSALSGQQFDMIVSNPPYIDAQDPHLS 195 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 +VR F+PR +L +G++ I D + L G +E G+ Q V F Sbjct: 196 EGDVR-FEPRSALVADENGMADLTHIIDNARQMLTPGGFLLLEHGWRQGEAVRAAF 250 >gi|126657233|ref|ZP_01728399.1| protoporphyrinogen oxidase [Cyanothece sp. CCY0110] gi|126621504|gb|EAZ92215.1| protoporphyrinogen oxidase [Cyanothece sp. CCY0110] Length = 301 Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 70/217 (32%), Positives = 107/217 (49%), Gaps = 16/217 (7%) Query: 57 WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI-----LDLGTGTGAV 111 WR F L +S D PRPETEL++D F+L ++ + +DLGTG+GA+ Sbjct: 91 WRRF---SLKVSPDVLIPRPETELIID----FALKAVQHSPNPHLSSGHWVDLGTGSGAI 143 Query: 112 CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS---VEGLFDVI 168 L L P VD S +AL IA+ NA+ G S + Q W++ ++G + Sbjct: 144 ALGLADSFPQATIHAVDTSIEALTIAQENALKEGFSSQIHLYQGSWWTPLQHLQGQVSAM 203 Query: 169 VSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228 VSNPPYI + ++ L EV++ +P ++LDGG +G + D +L G+ VE+ Sbjct: 204 VSNPPYIPTSLLSQLQPEVKEHEPILALDGGHEGFDAINYLIDTSPNYLISGGIFLVEMM 263 Query: 229 YNQKVDVVRIF-ESRKLFLVNAFKDYGGNDRVLLFCR 264 Q + ++ ES + +N D G R L R Sbjct: 264 AGQGEKISKLLQESSRYQDINLLPDLAGIARFALAYR 300 >gi|225025403|ref|ZP_03714595.1| hypothetical protein EIKCOROL_02301 [Eikenella corrodens ATCC 23834] gi|224941847|gb|EEG23056.1| hypothetical protein EIKCOROL_02301 [Eikenella corrodens ATCC 23834] Length = 270 Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 88/252 (34%), Positives = 123/252 (48%), Gaps = 15/252 (5%) Query: 11 LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70 +CR+T + ++I L QR L R + E + +LG R+FY +S Sbjct: 24 VCRITHV---RLISRSGDELPQPQRAVLDMLAARRRRGEPMAYLLGSREFYGRSFRVSPA 80 Query: 71 TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130 PRPETELLV++ALA P R+ DLG G+G + L + E P DIS Sbjct: 81 VLIPRPETELLVEAALARLPP------GGRLWDLGCGSGIIGLTVALERPDAAVRASDIS 134 Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIVDCLGLEV 187 AL +A++NA G S + Q WF+++ EGLFD+I SNPPYIE+ ++ Sbjct: 135 PDALAVAQANAAALGAS--IEWAQGSWFAALPAAEGLFDIIASNPPYIEAGDGHLQQGDL 192 Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLV 247 R F+P +L DGLSH RT+A +L G +E G+NQ V + Sbjct: 193 R-FEPAAALTDFADGLSHIRTLAAQAQGYLKPGGWLLLEHGWNQGEAVRGMLAEHGWQQE 251 Query: 248 NAFKDYGGNDRV 259 +D G DRV Sbjct: 252 ETLRDLAGLDRV 263 >gi|160900909|ref|YP_001566491.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Delftia acidovorans SPH-1] gi|160366493|gb|ABX38106.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Delftia acidovorans SPH-1] Length = 289 Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 72/218 (33%), Positives = 102/218 (46%), Gaps = 7/218 (3%) Query: 43 VRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRIL 102 R L E + +LG ++FY + L + + +PRP+TE LVD AL + + R++ Sbjct: 63 ARRLGTEPVAYLLGHKEFYGLDLAVDARVLDPRPDTETLVDWALELMPAQSQAARACRVV 122 Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162 DLGTG+GA+ LAL + P VD S AL +A +NA + +F W + Sbjct: 123 DLGTGSGAIALALQSQRPGATVWAVDASADALAVASANATRLQLGVQF--AHGSWLQPLA 180 Query: 163 GL--FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220 G FD+IVSNPPYI D L+ +P +L G DGL R I L + Sbjct: 181 GQAPFDLIVSNPPYIRD---DDPHLQALAHEPLSALASGADGLVDIRAIITQAPALLVRG 237 Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258 G +E G++Q V + V D GG R Sbjct: 238 GWLLMEHGWDQADAVAALLRHAGFGDVQHRHDLGGIAR 275 >gi|283768250|ref|ZP_06341163.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bulleidia extructa W1219] gi|283105127|gb|EFC06498.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bulleidia extructa W1219] Length = 284 Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 75/226 (33%), Positives = 114/226 (50%), Gaps = 16/226 (7%) Query: 44 RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFS---LPRIEKRDVVR 100 R L E + +LG+ FY ++ ++ + PR ETE L + L P +EK D+ Sbjct: 62 RILNGEPMAHVLGYSWFYGYKMLVNGEVLIPRYETEELCANILNRMDTFFPHLEKIDIA- 120 Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSDWFS 159 D+GTG+GA+ + L KE + DIS +A+E+AK NA N + E F D Sbjct: 121 --DVGTGSGAIAVTLCKEEKKCQMRASDISLEAIEMAKKNARLNEATIEFFVGNMLDPLI 178 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 DV+V NPPYI + + V D++P I+L GG DGL +YR + + +R L K Sbjct: 179 EKGIYLDVLVCNPPYIPQE--EEMESSVVDYEPHIALFGGKDGLKYYREVFENANRILKK 236 Query: 220 DGLCSVEIGYNQKVDVVRIFESRKLFLVN----AFKDYGGNDRVLL 261 + E+G+NQ+ + ++ + L N KD G DR+L Sbjct: 237 KSFMAFEMGWNQREAISQLIQE---MLPNDRFEILKDMNGKDRMLF 279 >gi|73667468|ref|YP_303484.1| modification methylase HemK [Ehrlichia canis str. Jake] gi|72394609|gb|AAZ68886.1| Modification methylase HemK [Ehrlichia canis str. Jake] Length = 280 Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 76/257 (29%), Positives = 124/257 (48%), Gaps = 5/257 (1%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 RD + + S I+DP +D I + + + I+G R+F++ Sbjct: 25 RDVEIIIKHLIDTKSLVTILDPYMSVDKCDVEMFWKMIKQRAANVPVSHIIGRREFWSTE 84 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 +++D +PRP++E ++ S LA P +R V+ D GTG+G + LL + G Sbjct: 85 FIVNADVLDPRPDSETIISSVLAM-YPCKNRRLVIG--DFGTGSGCLLAVLLLKYRNAVG 141 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184 + ++ S KA +A N + +S R S W + +FD+IVSNPPYI+ + L Sbjct: 142 IAIEKSVKAYRVAYQNFKNHQLSSRVKLRLSSW-DNCYDVFDLIVSNPPYIKRSKIAKLQ 200 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 EV+ ++P I+L+GG GL Y I + R L K+G+ +EIG +Q + RI L Sbjct: 201 PEVKLYEPMIALNGGPVGLEIYLQIFLVIKRCLKKNGVAILEIGEDQH-QIHRIVHKYGL 259 Query: 245 FLVNAFKDYGGNDRVLL 261 D G R ++ Sbjct: 260 KFCTYHNDLSGKLRCIV 276 >gi|268680052|ref|YP_003304483.1| modification methylase, HemK family [Sulfurospirillum deleyianum DSM 6946] gi|268618083|gb|ACZ12448.1| modification methylase, HemK family [Sulfurospirillum deleyianum DSM 6946] Length = 273 Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 73/225 (32%), Positives = 119/225 (52%), Gaps = 15/225 (6%) Query: 37 FLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA--LAFSLPRIE 94 + +A+ R ++E + ILG FY+ + + PRPETE+LVD A LA +LP+ Sbjct: 53 WWHSALKRRARYEPLEYILGRASFYDREFEVDARVLIPRPETEILVDKAVELAKTLPK-- 110 Query: 95 KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154 I+++G G+G + + L P K VDIS +AL +++ NAV +GVS+R +Q Sbjct: 111 ---EAHIVEIGCGSGIISIMLALMLPDVKITAVDISNEALHVSQKNAVKHGVSKRIAFVQ 167 Query: 155 SDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVR-DFDPRISLDGGIDGLSHYRTIADGV 213 + V D+IVSNPPY I + LE ++P ++L GG+ G I D Sbjct: 168 GSYLDGVSEPIDMIVSNPPY----IANHEALEENLSYEPSLALFGGVRGDEMLCHIMDLF 223 Query: 214 SRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258 K + + E+GY+Q+ ++ + +K +V+ ++D G DR Sbjct: 224 CE--RKVKVLACEMGYDQRYAIMD-YAKQKDLVVDFYQDLAGLDR 265 >gi|229000114|ref|ZP_04159684.1| Protein hemK [Bacillus mycoides Rock3-17] gi|229007634|ref|ZP_04165228.1| Protein hemK [Bacillus mycoides Rock1-4] gi|228753645|gb|EEM03089.1| Protein hemK [Bacillus mycoides Rock1-4] gi|228759651|gb|EEM08627.1| Protein hemK [Bacillus mycoides Rock3-17] Length = 283 Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 73/254 (28%), Positives = 127/254 (50%), Gaps = 5/254 (1%) Query: 11 LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70 LC V + ++++ + + Q+ TN I + + + ++G+ FY ++ + Sbjct: 28 LCHVLKTNRTGLMMNMREEMSEEQQKTFTNFIHKHVGGIPVQYMMGYEMFYGRSFFVNEE 87 Query: 71 TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130 PRPETE L+ L + R+ + + I D+GTG+GA+ + L E+ + VDI+ Sbjct: 88 VLIPRPETEELIVGVLD-RIQRMFGKQELHIADIGTGSGAISITLALENQNLRMYTVDIA 146 Query: 131 CKALEIAKSNAVTNGVSERF--DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVR 188 +++E+AK NA G + F L S ++ + + L DV+VSNPPYI L V+ Sbjct: 147 QESIEVAKENAKALGANVTFYHGDLLSPFYETGQKL-DVVVSNPPYIPEEDWRGLSPVVK 205 Query: 189 DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLV 247 + +P+ +L GG DGL YR + + L + + + E+G Q DV R+ + V Sbjct: 206 EHEPKRALVGGEDGLDFYRRFMEELPNVLQRKAIVAFEVGIGQGEDVKRLLQQTFPHAHV 265 Query: 248 NAFKDYGGNDRVLL 261 D G DR++ Sbjct: 266 EVVFDINGKDRMVF 279 >gi|218441827|ref|YP_002380156.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Cyanothece sp. PCC 7424] gi|218174555|gb|ACK73288.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Cyanothece sp. PCC 7424] Length = 299 Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 72/209 (34%), Positives = 104/209 (49%), Gaps = 7/209 (3%) Query: 57 WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116 WR F RL +S D PRPETE ++D L +DLGTG+GA+ L L Sbjct: 90 WRKF---RLKVSHDVLIPRPETEYIIDIVQKAILDTPLDLSGGNWVDLGTGSGAIALGLA 146 Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPP 173 VD S ALEIA+ NA+ G+ +R Q W+ +E G + +VSNPP Sbjct: 147 DLLTNATIYAVDTSLAALEIAEENAIELGLKQRIIFKQGSWWDPLEFLKGQINGMVSNPP 206 Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233 YI + I+ L EV +P ++LDGG DGL + + +L G+ +E+ Q Sbjct: 207 YIPTEIIPTLQPEVAYHEPTLALDGGEDGLMSIDYLVEISPFYLRSGGIWLIEMMAGQGK 266 Query: 234 DVVRIFESRKLFL-VNAFKDYGGNDRVLL 261 VV++ E++ + + F D G DR +L Sbjct: 267 KVVQLLENQGSYQNIQIFPDLAGIDRFVL 295 >gi|72162817|ref|YP_290474.1| modification methylase HemK [Thermobifida fusca YX] gi|71916549|gb|AAZ56451.1| modification methylase HemK [Thermobifida fusca YX] Length = 285 Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 78/263 (29%), Positives = 123/263 (46%), Gaps = 10/263 (3%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ V G+ ++ DS D R + R E + I G F + L Sbjct: 26 DAEELAAFVHGVRRGELHTVADSDFDAR----YWECVARRAAREPLQHITGRAYFRYLEL 81 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 + F PRPETE++V A+ +L ++ D + ++DLGTG+GA+ +++ +E P + Sbjct: 82 EVGPGVFIPRPETEMMVSWAID-TLRAMDVADPL-VVDLGTGSGAIAISIAQEVPRSRVH 139 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDW---FSSVEGLFDVIVSNPPYIESVIVDC 182 V++ AL AK N +G+ ER +D G D++++NPPY+ D Sbjct: 140 AVEVDATALSWAKRNIARSGLGERITAHHADMRTCLPEYHGRVDLVITNPPYVPLDSADE 199 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF-ES 241 + EVRD+DP I+L G DGL R + R L G ++E G Q +D+ +F E Sbjct: 200 IPPEVRDYDPAIALWAGPDGLDMIRQLEAVGRRLLRPGGYIAIEHGDGQGIDIPPLFPEE 259 Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264 V KD DR ++ R Sbjct: 260 LGWCEVRNRKDLAHRDRFVVARR 282 >gi|119477465|ref|ZP_01617656.1| Modification methylase HemK [marine gamma proteobacterium HTCC2143] gi|119449391|gb|EAW30630.1| Modification methylase HemK [marine gamma proteobacterium HTCC2143] Length = 285 Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 80/217 (36%), Positives = 112/217 (51%), Gaps = 13/217 (5%) Query: 32 DRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLP 91 + +R FLT + R + E I I G R F+++ L +++ T PRPETELLV+ L Sbjct: 51 EHERHFLT-LLERRIVGEPIAYITGERGFWSLDLQVNASTLIPRPETELLVEKTLEL--- 106 Query: 92 RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151 + ILDLGTG+GA+ LAL E + V D+ A+ +A+SN ++ Sbjct: 107 -MSDAASADILDLGTGSGAIALALASEKSGWCIVASDVQPNAVALAESNKAKYSLN-NVT 164 Query: 152 TLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRD--FDPRISLDGGIDGLSHYRT 208 L+S+WF ++ FDVIVSNPPYI+ LE D F+PR +L GL+ Sbjct: 165 VLESNWFDAIGNQCFDVIVSNPPYIDPQDNH---LEEGDVSFEPRSALVAENHGLADLEH 221 Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245 IAD +L G +E GYNQ D V+ R F Sbjct: 222 IADCAGAYLKDRGWLLLEHGYNQ-ADAVQALLLRAGF 257 >gi|323486284|ref|ZP_08091610.1| hypothetical protein HMPREF9474_03361 [Clostridium symbiosum WAL-14163] gi|323400394|gb|EGA92766.1| hypothetical protein HMPREF9474_03361 [Clostridium symbiosum WAL-14163] Length = 354 Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 83/298 (27%), Positives = 128/298 (42%), Gaps = 70/298 (23%) Query: 32 DRQRFFLTNAIVRSLKHE-----SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL 86 +RQR + + R + I ILG ++F + T+ + PR +TE LV++ L Sbjct: 60 NRQRLEKSYPVYRDYLEKRASRIPIQHILGNQEFMGLEFTVDENVLIPRQDTEKLVETVL 119 Query: 87 AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKS------- 139 R K + +LD+ TG+G + ++L + K DIS AL++AK Sbjct: 120 -----RDHKNQALSVLDMCTGSGCIAVSLAVLGGYDKVTAADISKAALKVAKKNVRRHFL 174 Query: 140 --------------------------------------------NAVTNGVS-------E 148 N + G++ + Sbjct: 175 VQKGTARSESTLISDTPWKLKMCTYVYQGGDAQEQETAGESVSDNGYSPGIARIPGVRKK 234 Query: 149 RFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206 F L+SD F ++E FD+IVSNPPYI S ++D L EV+D +PR++LDG DGL Y Sbjct: 235 EFVLLESDLFLNLEQDEKFDIIVSNPPYIPSAVIDGLEPEVKDHEPRMALDGAEDGLYFY 294 Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 R + R+L + G EIG +Q V ++ + + KD G DRV+ CR Sbjct: 295 RILVQQSGRYLKEGGFIYFEIGCDQAEAVGKLLTAAGFGEIETIKDEPGLDRVVRACR 352 >gi|325291371|ref|YP_004267552.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Syntrophobotulus glycolicus DSM 8271] gi|324966772|gb|ADY57551.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Syntrophobotulus glycolicus DSM 8271] Length = 287 Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 73/217 (33%), Positives = 110/217 (50%), Gaps = 7/217 (3%) Query: 47 KHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGT 106 K E + ++ R+F + + PRPETE+L++ + + R K +LDLGT Sbjct: 73 KREPLAYLVKTREFMGLDFYVDRRVLIPRPETEMLIEKLIELAEKRAGKDKEYSLLDLGT 132 Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-F 165 G+G + +A + K VDIS AL +A+ NAV +GV D Q D F+ V F Sbjct: 133 GSGVMAIAAARYIAGVKITAVDISEDALTVARQNAVKHGVE--IDFRQGDLFTPVANQKF 190 Query: 166 DVIVSNPPYIE-SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224 D I++NPPY+ + DC +R +P ++L GG DGL YR +A L+ G Sbjct: 191 DWILTNPPYVSLPEMEDCSPEVLR--EPHLALCGGEDGLEIYRRLAAQAGDFLHPGGKLL 248 Query: 225 VEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 EIG Q V ++F + K + F D G +R++L Sbjct: 249 AEIGSAQAPAVCKLF-AEKGYSTKVFNDLAGLNRMIL 284 >gi|88800297|ref|ZP_01115864.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Reinekea sp. MED297] gi|88777012|gb|EAR08220.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Reinekea sp. MED297] Length = 275 Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 76/235 (32%), Positives = 117/235 (49%), Gaps = 9/235 (3%) Query: 26 PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85 P+ L + Q + R L E + I+G R+F+++ L + T PRP+TE+LV+ Sbjct: 41 PEHELSEAQHHRFQDGCQRRLSGEPVAYIVGEREFWSLPLKTAPHTLIPRPDTEVLVEQV 100 Query: 86 LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145 LA P E R +DLGTGTGA+ LAL E P ++ G+D +A+ +A NA G Sbjct: 101 LA-DAPDGE----YRCVDLGTGTGAIALALKSERPKWQVEGIDRVPEAVALATENAQRLG 155 Query: 146 VSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204 + F +W + + + D++VSNPPYI++ +VR F+P +L GL+ Sbjct: 156 LDVTFRV--GNWCADLADDSIDILVSNPPYIDADDEHLSQGDVR-FEPESALVADQHGLA 212 Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRV 259 I D R L G +E G+ Q V + + V+ +DYG +RV Sbjct: 213 DISIIVDQAQRCLRPGGGVFIEHGWQQGDAVRALLQDAGFLRVDTRRDYGNQERV 267 >gi|329770543|ref|ZP_08261921.1| hypothetical protein HMPREF0433_01685 [Gemella sanguinis M325] gi|328836292|gb|EGF85961.1| hypothetical protein HMPREF0433_01685 [Gemella sanguinis M325] Length = 251 Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 68/184 (36%), Positives = 104/184 (56%), Gaps = 6/184 (3%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110 + ++G+ FY+ + ++ D PR ETE L+ L + + K+D +ILDL TG+G Sbjct: 69 LSHLVGFDYFYDRKFKVTKDVLSPRMETEELIYKVLEY--IKKSKKDSFKILDLCTGSGI 126 Query: 111 VCLALLKE--SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVI 168 + + L KE + + V DIS KAL IA NA N + F ++SD F ++ G FD+I Sbjct: 127 IAITLKKEIVEKYTEIVASDISEKALSIAIENANNNNANITF--IKSDLFDNISGKFDLI 184 Query: 169 VSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228 +SNPPYI + V ++DP ++L DG+ YR I + +L+KDG+ EIG Sbjct: 185 ISNPPYISYKDKITIKDNVLNYDPHLALFAEEDGIYFYRKIIENAVHYLSKDGVIFFEIG 244 Query: 229 YNQK 232 Y+QK Sbjct: 245 YDQK 248 >gi|254495516|ref|ZP_05108440.1| methyltransferase, HemK family [Polaribacter sp. MED152] gi|85819872|gb|EAQ41029.1| methyltransferase, HemK family [Polaribacter sp. MED152] Length = 286 Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 80/250 (32%), Positives = 130/250 (52%), Gaps = 20/250 (8%) Query: 22 VIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELL 81 ++V D ++ ++ L NAI R K E I I+G +F+ ++ +T PRPETE L Sbjct: 42 LVVKSDFKINQQKLTDLNNAIDRLKKEEPIQYIIGHTEFFGYPFLVNKNTLIPRPETEEL 101 Query: 82 VDSALAFSLPRIEKRDV-----VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136 V A+ + I + + ILD+GTGTG + ++L KE P +D+S +ALEI Sbjct: 102 V----AWIIEEINNNNTYKNKNISILDIGTGTGCIPISLAKELPNATISAIDVSDEALEI 157 Query: 137 AKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPR 193 AK NA+ N V+ F D L + S+++ +D+I+SNPPY+ ++ + V + +P Sbjct: 158 AKKNALANKVNINFIEKDILNT---SNLDDNYDIIISNPPYVRNLEKVEINNNVLENEPH 214 Query: 194 ISL---DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAF 250 ++L D + L Y IAD HL K+G EI + + + +++ + Sbjct: 215 LALFVEDN--NPLIFYNKIADLALYHLTKNGSLFFEINQYLGKETIALLKTKHYKAIELR 272 Query: 251 KDYGGNDRVL 260 KD NDR+L Sbjct: 273 KDIFKNDRML 282 >gi|330837037|ref|YP_004411678.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Spirochaeta coccoides DSM 17374] gi|329748940|gb|AEC02296.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Spirochaeta coccoides DSM 17374] Length = 287 Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 80/257 (31%), Positives = 119/257 (46%), Gaps = 7/257 (2%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ LC V +S Q++ + + + + L + ILGWR+FY R Sbjct: 27 DARLLLCAVMDVSQEQLLARWHTEVPEEASQRFAAMLSARLAATPMAYILGWREFYGRRF 86 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPR-IEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 + PRP+TE L+++ALA+ +E D I D+ TG+GAV + L E P + Sbjct: 87 HVDERVLIPRPDTETLIEAALAWIQEHSLEAPD---IADICTGSGAVGITLALELPSSRV 143 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183 DIS ALE+A NA+ G Q D V FD++VSNPPY+ + Sbjct: 144 ALTDISASALEVATENAMRLGAGN-IRLYQGDVTEPVASESFDIVVSNPPYLTPHWYSHV 202 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 +V +PR++L GG DGL+ R + G L +G +E + Q +V RI E Sbjct: 203 EAQVLK-EPRLALVGGDDGLTIIRRLVVGARSVLAPEGALFLECDWRQCDEVARIMERCG 261 Query: 244 LFLVNAFKDYGGNDRVL 260 + D G RV+ Sbjct: 262 FAQTWIYNDLAGRPRVV 278 >gi|328866298|gb|EGG14683.1| hypothetical protein DFA_10941 [Dictyostelium fasciculatum] Length = 335 Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 85/267 (31%), Positives = 134/267 (50%), Gaps = 27/267 (10%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 ++ DS V GL + I D L Q L I R L +E I I+G + F+ Sbjct: 70 SMLDSRILFEHVVGLKENARI-PKDLQLTPTQNKDLQEVIERRLNNEPIAYIVGHKYFWK 128 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + + T PRP++E L++ L L EK+ + ILDLGTGTG + L+LL+E Sbjct: 129 HKFKCNHSTLIPRPDSETLIEQIL--ELHNYEKQLPLNILDLGTGTGCLLLSLLEEFSNS 186 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL--------FDVIVSNPPY 174 KGVG+D S AL++AK N+++ + R +QS+W S+ +++I+SNPPY Sbjct: 187 KGVGIDQSLDALKVAKENSISLKMDNRSTFIQSNWVDSIVNQQHNNVPLKYNLIISNPPY 246 Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH--LNKDG--LCSV----- 225 I L V+ ++P +L +GL Y I+ + +H L++D L ++ Sbjct: 247 ISENEYQTLNPTVKQWEPITALVANDNGLREYDIISKSIRKHNLLSQDSNTLSNIPSFLV 306 Query: 226 -EIGYNQKVDVVRIFESRKLFLVNAFK 251 EIG+ Q+ V +KL + N F+ Sbjct: 307 FEIGHTQEESV------KKLVVDNGFE 327 >gi|77163924|ref|YP_342449.1| modification methylase HemK [Nitrosococcus oceani ATCC 19707] gi|254436166|ref|ZP_05049673.1| methyltransferase, HemK family [Nitrosococcus oceani AFC27] gi|76882238|gb|ABA56919.1| [protein release factor]-glutamine N5-methyltransferase [Nitrosococcus oceani ATCC 19707] gi|207089277|gb|EDZ66549.1| methyltransferase, HemK family [Nitrosococcus oceani AFC27] Length = 283 Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 76/239 (31%), Positives = 113/239 (47%), Gaps = 15/239 (6%) Query: 27 DSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL 86 D L Q + R K E + I GW++F+++ L ++ T PRPETE +V+ Sbjct: 48 DRRLTPTQWVSFQRLLQRRAKGEPLAYIRGWQEFWSLNLQVTEATLIPRPETEQVVE--- 104 Query: 87 AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146 +L R++ + + DLGTG+GA+ LA+ E P + + D+S + LE+A+ N G+ Sbjct: 105 -LALQRLDLERALNVADLGTGSGAIALAMGSERPRARVIATDVSAETLEVARENGRRLGL 163 Query: 147 SERFDTLQSDWFSSVEG-LFDVIVSNPPYIES----VIVDCLGLEVRDFDPRISLDGGID 201 L DWF + G F +I SNPPYI + + L F+P I+L Sbjct: 164 CNVTFRL-GDWFVPLVGERFHLIASNPPYIAEGDPHLTQNGLA-----FEPDIALIAKDK 217 Query: 202 GLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 GL R IA HL G +E GY Q ++ +F V F D G RV+ Sbjct: 218 GLGAARHIAMTAREHLLDGGWLLLEHGYEQGPSLLALFTQLGYQQVADFCDLAGLPRVV 276 >gi|254520298|ref|ZP_05132354.1| modification methylase [Clostridium sp. 7_2_43FAA] gi|226914047|gb|EEH99248.1| modification methylase [Clostridium sp. 7_2_43FAA] Length = 587 Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 70/240 (29%), Positives = 120/240 (50%), Gaps = 9/240 (3%) Query: 25 DPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDS 84 D + L D + +F I + I ILG +F + + PR +TE+LV+ Sbjct: 349 DKNVSLKDEKEYF--ELIEKRKNKMPIKYILGETEFMGLDFNVEEGVLIPRGDTEILVEE 406 Query: 85 ALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN 144 L+ I + D + + DL +G+GA+ +++ +D ++ K N + + Sbjct: 407 VLSI----INEEDELNVCDLCSGSGAIGISIANYRKKINVEEIDFYEVPEKVTKKNIIKH 462 Query: 145 GVSERFDTLQSDWFSSV--EGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201 G+ R ++SD +G +DVIVSNPPYI++ + L +V+ ++P +LDGG D Sbjct: 463 GLESRVKFIKSDLLKEPINQGKKYDVIVSNPPYIKADEISNLMDDVKKYEPHTALDGGDD 522 Query: 202 GLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 GL Y+ I + LN +G+ + EIGY+Q +V + + + + KD G DRV+L Sbjct: 523 GLVFYKRIIEESKTTLNNEGVLAFEIGYDQGEEVSNLMKEAGFYNIKLVKDLAGLDRVVL 582 >gi|322389536|ref|ZP_08063087.1| protein-(glutamine-N5) methyltransferase [Streptococcus parasanguinis ATCC 903] gi|321143811|gb|EFX39238.1| protein-(glutamine-N5) methyltransferase [Streptococcus parasanguinis ATCC 903] Length = 278 Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 76/223 (34%), Positives = 113/223 (50%), Gaps = 9/223 (4%) Query: 41 AIVRSLKHE-SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV 99 +I LKH I+G +F T+ PRPETE LV A L +++ + Sbjct: 57 SIFEQLKHHVPAQYIIGSAEFCGHVFTVDERVLIPRPETEELV----ALILEENDEK-AL 111 Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+LD+GTG+GA+ ++L P ++ D+S +AL +A+ NA + F + SD Sbjct: 112 RVLDIGTGSGAIAISLALARPTWQVQASDVSEEALALAQENAKQLEAALEFKS--SDVLD 169 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 +EG +D+IVSNPPYI V+ +G V +P ++L DG + Y IA L Sbjct: 170 ELEGPYDLIVSNPPYISRDDVEEVGANVLASEPHLALFADRDGYAIYEKIAQQAPSVLTP 229 Query: 220 DGLCSVEIGYNQKVDVVRIF-ESRKLFLVNAFKDYGGNDRVLL 261 DG +EIGY Q V +F E+ V KD G DR+++ Sbjct: 230 DGKIYLEIGYKQGAKVKELFQEAFPDKRVRVLKDQFGQDRMVV 272 >gi|254525471|ref|ZP_05137523.1| modification methylase, HemK family [Prochlorococcus marinus str. MIT 9202] gi|221536895|gb|EEE39348.1| modification methylase, HemK family [Prochlorococcus marinus str. MIT 9202] Length = 289 Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 67/205 (32%), Positives = 103/205 (50%), Gaps = 9/205 (4%) Query: 57 WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116 WRD ++L ++ PRPETEL+VD + F + +K + +LGTG+GA+ +AL Sbjct: 84 WRD---LKLKVTDKVLIPRPETELIVD--IVFKIFG-KKSNKFLFAELGTGSGAISIALA 137 Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPP 173 P G+ DI ALE+A N + +W+S +E G D+ +SNPP Sbjct: 138 LAYPLSHGMATDIDQNALEVAIRNYRNSSKQSNLKFFCGNWWSPLESFKGRLDLAISNPP 197 Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233 YI S + L EV++F+P+I+L GG DGL H + I L + G +E ++Q Sbjct: 198 YIPSDTYEKLPKEVKNFEPKIALLGGEDGLKHIKEIIQKAPLFLKEKGWLILENHFDQSE 257 Query: 234 DVVRIFESRKLFLVNAFKDYGGNDR 258 V ++ + + KD G R Sbjct: 258 KVKQLLIKNQFTSIEIVKDLSGIGR 282 >gi|91216496|ref|ZP_01253462.1| putative protoporphyrinogen oxidase [Psychroflexus torquis ATCC 700755] gi|91185290|gb|EAS71667.1| putative protoporphyrinogen oxidase [Psychroflexus torquis ATCC 700755] Length = 281 Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 79/250 (31%), Positives = 130/250 (52%), Gaps = 15/250 (6%) Query: 17 LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRP 76 L +H ++++ ++ LD ++ A R E IH ILG+ +F+ +R +++ PRP Sbjct: 38 LKTHDLLLESEANLDSKKLVEFKKAQSRLEAQEPIHYILGYTEFFGLRFRVNTSVLIPRP 97 Query: 77 ETELLVDSAL---AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133 ETE LV+ L FS + + ILDLGTG+G + +AL K P K +DIS +A Sbjct: 98 ETEELVEWILEDQKFS------KSQLSILDLGTGSGCIPIALAKHLPQAKLKALDISSEA 151 Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFS--SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFD 191 L++A+ N+ N + + Q+D + + D++VSNPPY++ + V + Sbjct: 152 LKLAELNSEDNNT--KIEYTQADLLTLKHLPEEIDIVVSNPPYVKFNEQAQMQDNVLKNE 209 Query: 192 PRISL-DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAF 250 P ++L D L YR IA+ S+ + K L VEI N + ++F+S + Sbjct: 210 PHLALFVKDSDPLIFYRRIAELTSK-MRKRPLVYVEINQNLAEETRQLFKSFGFQSLELR 268 Query: 251 KDYGGNDRVL 260 KD+ GN R+L Sbjct: 269 KDFRGNYRML 278 >gi|113475328|ref|YP_721389.1| HemK family modification methylase [Trichodesmium erythraeum IMS101] gi|110166376|gb|ABG50916.1| modification methylase, HemK family [Trichodesmium erythraeum IMS101] Length = 301 Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 73/209 (34%), Positives = 109/209 (52%), Gaps = 14/209 (6%) Query: 57 WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL- 115 WR+F L + S PRPETELL+D L + +E +D+GTG+GA+ L Sbjct: 93 WRNF---SLRVGSGVLIPRPETELLIDLVLVATNSVLELGHG-NWVDMGTGSGAIACGLA 148 Query: 116 --LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVS 170 L ++ + G+D S AL IA+ NAV+ G +R + + W+ +E G +V+ Sbjct: 149 DILTDASIY---GIDCSPVALAIARQNAVSLGYGDRINFYEGSWWQPLEHLRGQVSGMVA 205 Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230 NPPYI S +V L EVR +P ++LDGG+DGL R + + +L G+ VE+ Sbjct: 206 NPPYIPSDMVSTLEPEVRKHEPHLALDGGVDGLDCIRFLVETAPLYLVSGGVWLVEMMAG 265 Query: 231 QKVDVVRI-FESRKLFLVNAFKDYGGNDR 258 Q +V +I ++ V F D G DR Sbjct: 266 QSEEVAKILYDHGSYCQVEIFGDLEGVDR 294 >gi|149276500|ref|ZP_01882644.1| putative protoporphyrinogen oxidase [Pedobacter sp. BAL39] gi|149233020|gb|EDM38395.1| putative protoporphyrinogen oxidase [Pedobacter sp. BAL39] Length = 288 Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 75/259 (28%), Positives = 130/259 (50%), Gaps = 9/259 (3%) Query: 10 FLC--RVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67 ++C V+GL+ V ++ + +L D++ + K + +LG FY + + Sbjct: 28 YVCIEHVSGLNRMDVRMNWERILLDQEEQRYSEIATAMTKGRPVQHVLGETTFYGFSIQV 87 Query: 68 SSDTFEPRPETELLVD---SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 S D PRPETE LVD + L + + +R++D GTG+G + +A+ K Sbjct: 88 SPDVLIPRPETEELVDWILTTLRSDFQQAPETGPLRVIDFGTGSGCIPIAIKKHIAEAVV 147 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS-SVEGLFDVIVSNPPYIESVIVDCL 183 VDIS AL++AK NA+ N RF +Q+D + E +D++VSNPPYI+++ + Sbjct: 148 EAVDISQTALKVAKHNALMNNAEIRF--IQADMCNYKTEQKYDLMVSNPPYIKNLERIEM 205 Query: 184 GLEVRDFDPRISLDGGID-GLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 V + +P ++L + L Y +AD ++ LN+ G EI + + + + S+ Sbjct: 206 HKNVLEHEPHLALFVPDERPLLFYEALADLAAKSLNEQGYLFFEINEHLAQETIDMLASK 265 Query: 243 KLFLVNAFKDYGGNDRVLL 261 + KD G DR+L+ Sbjct: 266 SFKTIELRKDMQGKDRMLM 284 >gi|149925824|ref|ZP_01914088.1| modification methylase, HemK family protein [Limnobacter sp. MED105] gi|149825941|gb|EDM85149.1| modification methylase, HemK family protein [Limnobacter sp. MED105] Length = 307 Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 81/261 (31%), Positives = 121/261 (46%), Gaps = 10/261 (3%) Query: 10 FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69 + +TG ++ + L Q + + + E I ++ ++FY+ + Sbjct: 30 LMTHITGFDRVGLVTKGNRELPMDQLSAFKSLAAKRQQGEPIAYLVQQKEFYSRPFFVDP 89 Query: 70 DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129 PRPETE LV+ AL F + + + R+LD+G G+GA+ ++L E+P + DI Sbjct: 90 RVLIPRPETEELVEHALGFLQSKSTENLLTRVLDIGCGSGAIAVSLALENPILEVTATDI 149 Query: 130 SCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEG-----LFDVIVSNPPYIESVIVDCL 183 S AL +A+ NA G RF LQSD F ++ FD+I SNPPYIE Sbjct: 150 SADALWVAQFNANELGAKNIRF--LQSDLFENLLNQTPPLAFDLICSNPPYIELGDEHLS 207 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 ++R F+P+ +L G DGL YR IA L G VE G+ Q+ V +F Sbjct: 208 QGDLR-FEPQQALTDGGDGLHFYREIAQHSPSLLRAGGGVLVEHGHTQQEAVKALFSKAP 266 Query: 244 LFLVNAFKDYGGNDRVLLFCR 264 V D G R +F R Sbjct: 267 YVDVQGLPDLAGTPR-FVFAR 286 >gi|242280070|ref|YP_002992199.1| modification methylase, HemK family [Desulfovibrio salexigens DSM 2638] gi|242122964|gb|ACS80660.1| modification methylase, HemK family [Desulfovibrio salexigens DSM 2638] Length = 287 Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 77/256 (30%), Positives = 126/256 (49%), Gaps = 8/256 (3%) Query: 10 FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69 F +V L+ Q+I++ +S +D + + R E ILG ++F+ + Sbjct: 32 FAEKVFDLNRVQLIMELESSVDTEKAAEFDALVKRRASGEPAAYILGVKEFFGFDFKVGP 91 Query: 70 DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129 PRPETE +V+ D D GTG+G + + + K P +G+ +D+ Sbjct: 92 GVLIPRPETEEIVEKVQQL----FSTEDEFLFADFGTGSGILAVTVAKLFPKARGIALDL 147 Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVDCLGLEV 187 S AL IA+ NA +GVSER +++D+ + + FD+I++NPPY+ +D + EV Sbjct: 148 SPAALAIAQDNARLHGVSERVLFVRADFNEPLLADAKFDLILANPPYLCEAELDEISYEV 207 Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF-- 245 +F+P +L G DG + A ++ L + G +EIGY Q IF+S F Sbjct: 208 AEFEPVSALVSGPDGDEDIKGSAPRIASALKQGGTVFMEIGYLQGKVAHSIFDSCSEFSG 267 Query: 246 LVNAFKDYGGNDRVLL 261 V KD +DRV++ Sbjct: 268 CVEVQKDLSEHDRVVV 283 >gi|187476812|ref|YP_784836.1| protein methyltransferase [Bordetella avium 197N] gi|115421398|emb|CAJ47903.1| protein methyltransferase [Bordetella avium 197N] Length = 269 Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 73/218 (33%), Positives = 113/218 (51%), Gaps = 9/218 (4%) Query: 44 RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103 R L E + ++G R+F ++ PRP+TE LV++ALAF ++ R R+LD Sbjct: 54 RRLAGEPMAYVIGEREFMGHVFQVTPAVLIPRPDTETLVEAALAF----LKTRPQARVLD 109 Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-- 161 LGTG+GA+ +++ P + D+S +AL +A+ NA GV R Q WF+++ Sbjct: 110 LGTGSGAIAVSIALACPQAEVSATDLSAEALAVARGNADRLGV--RLHLAQGSWFAALDA 167 Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221 + FD+IVSNPPYI ++R F+PR +L G DGL+ IA L G Sbjct: 168 DARFDLIVSNPPYIHRNDAHLAQGDLR-FEPRGALTDGADGLAALAEIALEAPGRLLPGG 226 Query: 222 LCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRV 259 +E G++Q V + + L V + D G +R+ Sbjct: 227 ALWMEHGWDQAAAVRALLQEAGLRDVASQPDLAGIERI 264 >gi|171911848|ref|ZP_02927318.1| modification methylase, HemK family protein [Verrucomicrobium spinosum DSM 4136] Length = 307 Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 69/211 (32%), Positives = 111/211 (52%), Gaps = 4/211 (1%) Query: 49 ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108 E + +LG +F++ PRPETE LV + P+ E R+LD+GTG+ Sbjct: 69 EPLQHLLGTVEFHDSEFVCDHRALIPRPETEHLVHLLVDKWFPKSEPPH--RLLDVGTGS 126 Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSDWFSSVEGLFDV 167 G + L+L K P + + VDIS ALE+A+ NA G++ ++ ++SD +G FD+ Sbjct: 127 GCIGLSLAKAWPAAEVLLVDISEDALELARLNAGRLGLNGQKVRLVRSDLLEHADGAFDL 186 Query: 168 IVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227 IV+N PYI + + + EV DP ++LDGG DGL + + HL ++GL ++E+ Sbjct: 187 IVANLPYIPTAELKEISREVA-HDPNLALDGGPDGLVIVDRLLETAPEHLTENGLLALEL 245 Query: 228 GYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258 Y+Q V + + + +D G R Sbjct: 246 HYDQASAVSERLQKLGFQAIQSAEDLAGIPR 276 >gi|217969846|ref|YP_002355080.1| modification methylase, HemK family [Thauera sp. MZ1T] gi|217507173|gb|ACK54184.1| modification methylase, HemK family [Thauera sp. MZ1T] Length = 289 Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 79/255 (30%), Positives = 120/255 (47%), Gaps = 8/255 (3%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L V + +++ P+ L + R + + G R+FY Sbjct: 28 DARVLLRHVLQCPAARLVAWPEQKLAAEDWAEYRALVERRAAGVPVAYLTGTREFYGREF 87 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 ++ PRPETELLV+ ALA R +R+LDLGTG+GA+ + L E + V Sbjct: 88 LVTPAVLIPRPETELLVELALA----HFPGRRGLRVLDLGTGSGALAVTLALELEAAEVV 143 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLG 184 +D S +AL +A +NA G S F +QSDWF ++ + F++IVSNPPY+ + Sbjct: 144 ALDRSREALWVAMANAARLGASVSF--VQSDWFGALGDEHFELIVSNPPYVAAGDPHLEQ 201 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 +VR F+PR +L G GL I G L G +E GY+Q + Sbjct: 202 GDVR-FEPRGALAAGPQGLDDLAEIVAGAPARLVDGGWLFLEHGYDQAASARGLLADAGF 260 Query: 245 FLVNAFKDYGGNDRV 259 + ++ D G +RV Sbjct: 261 AAIASWADLAGIERV 275 >gi|303327274|ref|ZP_07357716.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Desulfovibrio sp. 3_1_syn3] gi|302863262|gb|EFL86194.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Desulfovibrio sp. 3_1_syn3] Length = 283 Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 81/251 (32%), Positives = 124/251 (49%), Gaps = 7/251 (2%) Query: 14 VTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFE 73 V GL ++ + L Q L R E + +ILG R+F+ ++ DT Sbjct: 33 VLGLDRLHCVLAAERELTPDQAGTLEALTARRATGEPLAQILGGREFFGRTFLVTPDTLI 92 Query: 74 PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133 PRPETELLV++AL LP + +R DLG G+G + + L E P + G+ +++S A Sbjct: 93 PRPETELLVETALEL-LPAGQP---LRFADLGAGSGCIGVTLCLERPRWCGLLLELSAPA 148 Query: 134 LEIAKSNAVTNGVSERFDTLQSDW--FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFD 191 LE+A++NA G + R D L++D G D++VSNPPYI + EV F+ Sbjct: 149 LEVARANAARLGAATRLDALRADLRAIPLAGGSCDLLVSNPPYIADAERGQVMDEVLRFE 208 Query: 192 PRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL-VNAF 250 P +L GL+H R + +R L GL +E G +Q V + + F+ + Sbjct: 209 PHSALFSPEAGLAHLRAVIAQAARLLRPGGLLLLEHGADQGKAVRDLLSAGDAFVGIATR 268 Query: 251 KDYGGNDRVLL 261 +D G +R L Sbjct: 269 RDLAGLERCAL 279 >gi|228994047|ref|ZP_04153948.1| Protein hemK [Bacillus pseudomycoides DSM 12442] gi|228765695|gb|EEM14348.1| Protein hemK [Bacillus pseudomycoides DSM 12442] Length = 283 Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 73/254 (28%), Positives = 126/254 (49%), Gaps = 5/254 (1%) Query: 11 LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70 LC V + ++++ + + Q+ TN I + + + ++G+ FY ++ + Sbjct: 28 LCHVLKTNRTGLMMNMREEMSEEQQKTFTNFIHKHVGGIPVQYMMGYEMFYGRSFFVNEE 87 Query: 71 TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130 PRPETE L+ L + R+ + + I D+GTG+GA+ + L E+ VDI+ Sbjct: 88 VLIPRPETEELIVGVLD-RIQRMFGKQELHIADIGTGSGAISITLALENQNLHMYTVDIA 146 Query: 131 CKALEIAKSNAVTNGVSERF--DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVR 188 +++E+AK NA G + F L S ++ + + L DV+VSNPPYI L V+ Sbjct: 147 QESIEVAKENAKALGANVTFYHGDLLSPFYETGQKL-DVVVSNPPYIPEEDWRGLSPVVK 205 Query: 189 DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLV 247 + +P+ +L GG DGL YR + + L + + + E+G Q DV R+ + V Sbjct: 206 EHEPKRALVGGEDGLDFYRRFMEELPNVLQRKAIVAFEVGIGQGEDVKRLLQQTFPHAHV 265 Query: 248 NAFKDYGGNDRVLL 261 D G DR++ Sbjct: 266 EVVFDINGKDRMVF 279 >gi|87198312|ref|YP_495569.1| HemK family modification methylase [Novosphingobium aromaticivorans DSM 12444] gi|87133993|gb|ABD24735.1| [protein release factor]-glutamine N5-methyltransferase [Novosphingobium aromaticivorans DSM 12444] Length = 291 Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 78/226 (34%), Positives = 116/226 (51%), Gaps = 10/226 (4%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101 + R L HE + I+G +FY + L ++ PR +TE LV++A R R RI Sbjct: 60 VERRLGHEPVAYIIGSAEFYGLDLAVTPAVLIPRGDTETLVEAAREAFAWRAAPR---RI 116 Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDWF 158 LDLGTG+GA+ LA L P +GV ++ S +AL +A++N + + RF D Q DW Sbjct: 117 LDLGTGSGALLLAALSLWPQAEGVAIERSPEALAVARANGARHAPAARFLPGDWTQPDWS 176 Query: 159 SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 + + G FD+I+SNPPY+E L L VR +P +L G +GL YR + + L Sbjct: 177 ADL-GTFDLILSNPPYVEDEA--DLALSVRAHEPSAALFSGPEGLDDYRVLVPQLPGLLT 233 Query: 219 KDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 G+ VEIG+ Q V I + + +D DR + + Sbjct: 234 DQGIAIVEIGWQQGQAVSAIARASGM-TARIHRDLANRDRAVEMAK 278 >gi|94312134|ref|YP_585344.1| HemK family modification methylase [Cupriavidus metallidurans CH34] gi|93355986|gb|ABF10075.1| N5-glutamine methyltransferase, modifies release factors RF-1 and RF-2 [Cupriavidus metallidurans CH34] Length = 310 Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 79/255 (30%), Positives = 124/255 (48%), Gaps = 8/255 (3%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 ++ L VTG + Q+I + LD +R + R L E + ++G R+F+ Sbjct: 54 EARMLLSHVTGFTRTQLITRDNDHLDAPKRDAFATLLARRLTGEPMAYLIGEREFFGRTF 113 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 ++ D PRP+TE+ +++LA RI R+LD+GTG+G + + + +E P + Sbjct: 114 RVTPDVLIPRPDTEVAAEASLA----RIADVKAPRVLDMGTGSGILAVTIARERPDAEVW 169 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GL-FDVIVSNPPYIESVIVDCL 183 DIS AL +A+ NA +E L SDW+ + GL F++IVSNPPYI + Sbjct: 170 ATDISRGALMVAEDNARAL-QAENIRFLVSDWYEDLPVGLCFNLIVSNPPYIAEGDPHLV 228 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 ++R F+P +L DGLS TI G + L G +E GY+Q + Sbjct: 229 EGDLR-FEPIDALTDHEDGLSDLATIVAGATARLLPGGWLLMEHGYDQGAAMRAQLAEAG 287 Query: 244 LFLVNAFKDYGGNDR 258 V +D G +R Sbjct: 288 FVEVFTTRDLAGLER 302 >gi|251771815|gb|EES52390.1| modification methylase, HemK family [Leptospirillum ferrodiazotrophum] Length = 308 Score = 106 bits (264), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 69/189 (36%), Positives = 97/189 (51%), Gaps = 3/189 (1%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101 I R E H I G F L+ PRPETE LV+ AL + + R+ +RI Sbjct: 81 INRRAAREPHHLITGEITFCGHSFFLAPGVLIPRPETEQLVELALRHTA-ASKGREPLRI 139 Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW--FS 159 LDLG+G+G + L+ L E P + V V+ AL N + + +R ++ DW Sbjct: 140 LDLGSGSGVIALSFLLERPEARAVAVEREPLALATLLENRRRHRLVDRLAVVRGDWEEMF 199 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 +FD I+SNPPYI + + L EVR ++P +LDGG DGL YR I R + + Sbjct: 200 GERPVFDCILSNPPYIPTDTIPALEPEVRAYEPASALDGGADGLDPYRKILPRAFRLIRE 259 Query: 220 DGLCSVEIG 228 GL ++EIG Sbjct: 260 GGLIALEIG 268 >gi|194336187|ref|YP_002017981.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Pelodictyon phaeoclathratiforme BU-1] gi|194308664|gb|ACF43364.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Pelodictyon phaeoclathratiforme BU-1] Length = 299 Score = 106 bits (264), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 67/217 (30%), Positives = 107/217 (49%), Gaps = 8/217 (3%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL-AFSLPRIEKRDVVRILDLGTGTG 109 + + G + FY ++ + PRPETELLV+ L A + +ILD+GTG+G Sbjct: 79 VQYLTGEQYFYGLQFFVDERVLIPRPETELLVEQVLDALGMTGRGGSRKAKILDIGTGSG 138 Query: 110 AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV------EG 163 + + L K P +D S +ALE+A+ N + +GV + + +D+F E Sbjct: 139 CIAVTLAKLFPELTVSAIDCSLEALEVARINVLKHGVESQVSCIHADFFDEFFATRLPET 198 Query: 164 LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223 +D+IVSNPPYI + L EV+ ++P+I+L G+ Y IA ++ L G Sbjct: 199 SYDLIVSNPPYIPVCEWEGLQREVKQYEPKIALTTP-QGVECYHAIAAQAAKLLVPGGRL 257 Query: 224 SVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 E+ + V + E+ + KDY G DR+L Sbjct: 258 CFELHADAAAVVSELLEANGFGGITVTKDYSGLDRIL 294 >gi|313622329|gb|EFR92816.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Listeria innocua FSL J1-023] Length = 283 Score = 106 bits (264), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 83/247 (33%), Positives = 112/247 (45%), Gaps = 10/247 (4%) Query: 16 GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75 GL+ ++ ++ L+ R L E + IL FY ++ D PR Sbjct: 34 GLTRSELWMEMSRELEPNHEKQFQEDFARYLAGEPVQYILKTAPFYGYDFLVTEDVLIPR 93 Query: 76 PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135 PETE LV +A AF ++K + +LD+ TG+G + +AL K P DIS AL Sbjct: 94 PETEELVATAEAF----LKKHPLRSLLDVCTGSGIIAIALKKAFPDITVTASDISAAALA 149 Query: 136 IAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDP 192 IAK NA+ RF D L+S F FD+IV+NPPYI + V +P Sbjct: 150 IAKKNALLLNADVRFIETDLLES--FKQNNERFDMIVANPPYISEAEKAEMSDYVLKNEP 207 Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE-SRKLFLVNAFK 251 I+L DGL+ Y D + LN VEIGY Q V ++FE S V K Sbjct: 208 SIALFAENDGLAIYERFVDNLKYVLNPSFWVGVEIGYTQGERVKQLFEKSYPHATVLIHK 267 Query: 252 DYGGNDR 258 D DR Sbjct: 268 DINSKDR 274 >gi|220915514|ref|YP_002490818.1| modification methylase, HemK family [Anaeromyxobacter dehalogenans 2CP-1] gi|219953368|gb|ACL63752.1| modification methylase, HemK family [Anaeromyxobacter dehalogenans 2CP-1] Length = 286 Score = 106 bits (264), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 80/259 (30%), Positives = 121/259 (46%), Gaps = 24/259 (9%) Query: 7 SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66 +H+ C ++ +D D L + + + + R + E + G RDFY Sbjct: 37 AHALRC-----ERMRLYLDFDKPLGEPELAAFRDLVRRRAEGEPTAYLTGRRDFYGRPFL 91 Query: 67 LSSDTFEPRPETELLVDSALAFSLPRIEKRDVV----RILDLGTGTGAVCLALLKESPFF 122 + + PRPETEL++++A RD + LDL TG+GA+ ++L E P Sbjct: 92 VDARVLVPRPETELVLEAA----------RDALPEGGAALDLCTGSGALGVSLALERPGA 141 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIV 180 + V D+S AL +A NA G + D Q D ++ + FDVIVSNPPY+ + Sbjct: 142 RVVATDLSADALAVAAENARALGAA--VDLRQGDLWAPLRAGERFDVIVSNPPYVPRGEL 199 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 D L EVR +PR++LDGG DGLS R I +G L G +E+ + R+ Sbjct: 200 DTLPREVRR-EPRLALDGGPDGLSLLRRIVEGAPARLAPGGTLVLEMHEGHLELLPRLCR 258 Query: 241 SRKLFLVNAFKDYGGNDRV 259 A +D G R+ Sbjct: 259 DAGFAQAEARRDLAGLPRL 277 >gi|290892705|ref|ZP_06555697.1| modification methylase [Listeria monocytogenes FSL J2-071] gi|290557765|gb|EFD91287.1| modification methylase [Listeria monocytogenes FSL J2-071] Length = 283 Score = 106 bits (264), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 82/247 (33%), Positives = 112/247 (45%), Gaps = 10/247 (4%) Query: 16 GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75 GLS ++ ++ + L+ R L E + IL FY ++ D PR Sbjct: 34 GLSRSELWMEINRELEPNHEKQFEEDFARYLAGEPVQYILKTAPFYGYDFLVTEDVLIPR 93 Query: 76 PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135 PETE LV A F ++K V +LD+ TG+G + +AL K P DIS AL Sbjct: 94 PETEELVACAEDF----LKKHPVKNVLDVCTGSGIIAIALKKAFPEISMTASDISAPALA 149 Query: 136 IAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDP 192 +AK NA+ RF D L++ F E FD+IV+NPPYI + V +P Sbjct: 150 VAKKNALLLNADVRFVETDLLEA--FKQNEERFDMIVANPPYISEAEKAEMSDYVLKNEP 207 Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE-SRKLFLVNAFK 251 ++L DGL+ Y D + LN VEIGY Q V ++FE S V K Sbjct: 208 SLALFAENDGLAIYERFVDNLQYVLNSSFWVGVEIGYTQGERVKQLFEKSYPHSTVIIHK 267 Query: 252 DYGGNDR 258 D DR Sbjct: 268 DINSKDR 274 >gi|229588284|ref|YP_002870403.1| protein methyltransferase [Pseudomonas fluorescens SBW25] gi|229360150|emb|CAY47007.1| protein methyltransferase [Pseudomonas fluorescens SBW25] Length = 276 Score = 106 bits (264), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 81/243 (33%), Positives = 123/243 (50%), Gaps = 14/243 (5%) Query: 26 PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85 P+ ++ + R E + ILG + F+ + L ++ T PRP+TELLV++A Sbjct: 42 PEKIVSSEDALTFAGYLQRRRGGEPVAYILGQQGFWKLDLEVAPHTLIPRPDTELLVEAA 101 Query: 86 LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT-- 143 L ++LDLGTG+GA+ LAL E P ++ VD +A+ +A+ N Sbjct: 102 LELL-----PATPAKVLDLGTGSGAIALALASERPAWQVTAVDRVLEAVALAERNRQRLH 156 Query: 144 -NGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201 N V+ L S WFS++ G +D+I+SNPPYI + + +VR F+P +L G D Sbjct: 157 LNNVT----VLNSHWFSALPGHTYDLIISNPPYIAANDPHLVAGDVR-FEPASALVAGHD 211 Query: 202 GLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 GL R I HLN G +E GY+Q V + S V++ D GG++R+ L Sbjct: 212 GLDDLRLIIKEAPAHLNAGGRLLLEHGYDQAPAVRDLLLSEGFEEVHSRIDLGGHERITL 271 Query: 262 FCR 264 R Sbjct: 272 GRR 274 >gi|225386764|ref|ZP_03756528.1| hypothetical protein CLOSTASPAR_00512 [Clostridium asparagiforme DSM 15981] gi|225047126|gb|EEG57372.1| hypothetical protein CLOSTASPAR_00512 [Clostridium asparagiforme DSM 15981] Length = 342 Score = 106 bits (264), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 76/270 (28%), Positives = 120/270 (44%), Gaps = 56/270 (20%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101 I R + + ++LG ++F + ++ PR +TE LV+ L +KR + + Sbjct: 66 ITRRAERIPLQQLLGVQEFMGLEFFVNEHVLIPRQDTETLVELVL-----EEQKRRDLDV 120 Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT--NGVSERFDTLQSDWFS 159 LD+ TG+G + ++L + + +D+S +AL++A+ NA F +QSD F+ Sbjct: 121 LDVCTGSGCIAVSLARLGRYASVTALDVSAEALKVAEKNAAALLGEYDGDFRLVQSDMFA 180 Query: 160 SVE--GL-----------------------------------------------FDVIVS 170 +E GL FD++VS Sbjct: 181 GLETKGLQEQKPVEPDTSREQTSGEPDAWQGRTAVKPAVAGELPCRLCVPCTLRFDILVS 240 Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230 NPPYI S +++ L EVRD +PR++LDG DGL YR +A R L G EIG++ Sbjct: 241 NPPYIPSQVIEGLEPEVRDHEPRLALDGSPDGLKFYRILASEGKRFLRPGGAVYFEIGWD 300 Query: 231 QKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 Q V + E + KD G DRV+ Sbjct: 301 QAQAVSALLEQEGFARIRTVKDMAGMDRVV 330 >gi|239828603|ref|YP_002951227.1| modification methylase, HemK family [Geobacillus sp. WCH70] gi|239808896|gb|ACS25961.1| modification methylase, HemK family [Geobacillus sp. WCH70] Length = 288 Score = 106 bits (264), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 83/266 (31%), Positives = 125/266 (46%), Gaps = 17/266 (6%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDD--RQRFFLTNAIVRS--LKHESIHRILGWRDF 60 R + LC ++ Q+ +D+ RQ F A VR +H + ++G F Sbjct: 24 RAAELLLCHHLQITRAQLFARLRDPIDENVRQSF---EADVRKHVYEHVPVQHLIGLEQF 80 Query: 61 YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120 Y ++ + PRPETE LV+ L + ++D+GTG+GA+ + L E+ Sbjct: 81 YGRPFLVNRNVLIPRPETEELVEGVLTRITQLFPGNKTIDVVDVGTGSGAIAITLALENK 140 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIES 177 + +DI+ +ALE+AK NA G F D LQ +S + DV+VSNPPYI Sbjct: 141 SLRVAAIDIAPEALEVAKRNAERLGADVAFICGDLLQPLVEASRK--VDVVVSNPPYIPE 198 Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237 + L V+D++P +L GG DGL YR A + L + L + E+G Q V Sbjct: 199 NEIASLSPVVKDYEPLRALSGGKDGLDFYRRFARELPFVLKERALVAFEVGAGQGEAVAA 258 Query: 238 IFESRKLFL---VNAFKDYGGNDRVL 260 I R+ F V D G DR++ Sbjct: 259 IL--RQTFPQAEVEVVFDINGKDRMV 282 >gi|226225090|ref|YP_002759197.1| protoporphyrinogen oxidase [Listeria monocytogenes Clip81459] gi|225877552|emb|CAS06266.1| Putative protoporphyrinogen oxidase [Listeria monocytogenes serotype 4b str. CLIP 80459] Length = 283 Score = 106 bits (264), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 82/247 (33%), Positives = 112/247 (45%), Gaps = 10/247 (4%) Query: 16 GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75 GLS ++ ++ + L+ R L E + IL FY ++ D PR Sbjct: 34 GLSRSELWMEINRELEPNHEKQFEKDFARYLAGEPVQYILKTAPFYGYDFLVTEDVLIPR 93 Query: 76 PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135 PETE LV A F ++K V +LD+ TG+G + +AL K P DIS AL Sbjct: 94 PETEELVACAEDF----LKKHSVKNVLDVCTGSGIIAIALKKAFPDISMTASDISAPALA 149 Query: 136 IAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDP 192 +AK NA+ RF D L++ F E FD+IV+NPPYI + V +P Sbjct: 150 VAKKNALLLNADVRFVETDLLEA--FKQNEERFDMIVANPPYISEAEKAEMSDYVLKNEP 207 Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE-SRKLFLVNAFK 251 ++L DGL+ Y D + LN VEIGY Q V ++FE S V K Sbjct: 208 SLALFAENDGLAIYERFVDNLQYVLNSSFWVGVEIGYTQGERVKQLFEKSYPHSTVIIHK 267 Query: 252 DYGGNDR 258 D DR Sbjct: 268 DINSKDR 274 >gi|94987068|ref|YP_595001.1| protoporphyrinogen oxidase HemK [Lawsonia intracellularis PHE/MN1-00] gi|3599925|gb|AAC36501.1| orfx; similar to Escherichia coli possible protoporphyrinogen oxidase (hemK) [Lawsonia intracellularis] gi|94731317|emb|CAJ54680.1| similar to Escherichia coli possible protoporphyrinogen oxidase (hemK) [Lawsonia intracellularis PHE/MN1-00] Length = 293 Score = 105 bits (263), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 73/260 (28%), Positives = 122/260 (46%), Gaps = 14/260 (5%) Query: 11 LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70 L V ++ Q+I+ P + L + ++R L E I + G ++F++ ++ Sbjct: 31 LSHVLNITRLQIIMTPFEPIPTNSYSTLNDIMLRRLHGEPIAYLTGKKEFFSREFKVTQA 90 Query: 71 TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130 T PRPETELL++ F L I + DLGTG+G + + L E + G+ DIS Sbjct: 91 TLIPRPETELLIE----FVLNHINPTQQIYFADLGTGSGCIAITLAAERKNWLGIATDIS 146 Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSS--VEGLFDVIVSNPPYIESVIVDCLGLEVR 188 +AL+IAK N++ N + LQSD+ + D+ +SNPPYI + L EV Sbjct: 147 SEALKIAKLNSLKNNTHSQLQFLQSDFTQPLCLPSSLDLYISNPPYISENELTSLPHEVI 206 Query: 189 DFDPRISLDGG-------IDGLSH-YRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 F+P+I+L I+ + H Y+ I L G+ +E G Q ++ + + Sbjct: 207 SFEPKIALTPHKCIHLDEINTVLHCYKKIITQAEISLKPGGIIILEHGATQAEAILLLLK 266 Query: 241 SRKLFLVNAFKDYGGNDRVL 260 + V + D +R + Sbjct: 267 NNIWTNVISHTDLTNKNRFI 286 >gi|116072663|ref|ZP_01469929.1| Modification methylase HemK [Synechococcus sp. BL107] gi|116064550|gb|EAU70310.1| Modification methylase HemK [Synechococcus sp. BL107] Length = 302 Score = 105 bits (263), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 72/218 (33%), Positives = 109/218 (50%), Gaps = 10/218 (4%) Query: 44 RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103 +S+ + + + WRD L +SS PR ETELLVD ALAF+ R + D Sbjct: 80 QSMPLQHLVGVCPWRDLL---LEVSSAALIPRQETELLVDLALAFAGGRPPRS----WAD 132 Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE- 162 LGTG GA+ ++L + P +G VD+S AL +A+ N ++ Q W+ + Sbjct: 133 LGTGCGAIAVSLCRAWPDAEGHAVDLSIDALALAEKNLKALAPAQSCRLQQGSWWVPLRA 192 Query: 163 --GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220 G +++VSNPPYI S ++ L VR+ +P ++L GG DGL R++ R L Sbjct: 193 SWGQLEIVVSNPPYIPSPLLGELAPVVREHEPHVALVGGEDGLEAIRSLLKDAPRALAPG 252 Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258 G+ +E ++Q V + L V+A D G R Sbjct: 253 GVLFLEHHHDQSESVQDLMRRVGLVNVSAANDLEGVAR 290 >gi|328957994|ref|YP_004375380.1| glutamine methylase of release factor 1 [Carnobacterium sp. 17-4] gi|328674318|gb|AEB30364.1| glutamine methylase of release factor 1 [Carnobacterium sp. 17-4] Length = 282 Score = 105 bits (263), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 79/212 (37%), Positives = 118/212 (55%), Gaps = 8/212 (3%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110 I ++LG+ FY+ + ++ DT PRPETE +VD L S E++ V LD+GTGTG Sbjct: 72 IQQLLGYCWFYDRKFKVTKDTLIPRPETEEIVDIFLKSS--STEQKKTV--LDIGTGTGI 127 Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIV 169 + + + KE P F+ DIS KAL++A+ NA RF L+ D V+ FDVI+ Sbjct: 128 IGITIKKERPLFEVTATDISSKALKVAQENATALEADVRF--LEGDLTDPVKTESFDVIL 185 Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY 229 SNPPYI + + + V ++P ++L +GL+ Y+ +A + LN G +EIG+ Sbjct: 186 SNPPYISNDEISYMDESVLHYEPHLALFAENNGLAMYQRLAKELPTILNPGGEVFLEIGF 245 Query: 230 NQKVDVVRIF-ESRKLFLVNAFKDYGGNDRVL 260 Q V +F E+ L V KD GNDR++ Sbjct: 246 KQGKKVQELFQEAFPLAEVTIEKDMSGNDRLI 277 >gi|47096964|ref|ZP_00234540.1| modification methylase, HemK family [Listeria monocytogenes str. 1/2a F6854] gi|254828118|ref|ZP_05232805.1| modification methylase [Listeria monocytogenes FSL N3-165] gi|254900319|ref|ZP_05260243.1| hypothetical protein LmonJ_10912 [Listeria monocytogenes J0161] gi|254913442|ref|ZP_05263454.1| modification methylase [Listeria monocytogenes J2818] gi|254937823|ref|ZP_05269520.1| modification methylase [Listeria monocytogenes F6900] gi|284802980|ref|YP_003414845.1| hypothetical protein LM5578_2737 [Listeria monocytogenes 08-5578] gi|284996121|ref|YP_003417889.1| hypothetical protein LM5923_2686 [Listeria monocytogenes 08-5923] gi|47014674|gb|EAL05631.1| modification methylase, HemK family [Listeria monocytogenes str. 1/2a F6854] gi|258600503|gb|EEW13828.1| modification methylase [Listeria monocytogenes FSL N3-165] gi|258610427|gb|EEW23035.1| modification methylase [Listeria monocytogenes F6900] gi|284058542|gb|ADB69483.1| hypothetical protein LM5578_2737 [Listeria monocytogenes 08-5578] gi|284061588|gb|ADB72527.1| hypothetical protein LM5923_2686 [Listeria monocytogenes 08-5923] gi|293591449|gb|EFF99783.1| modification methylase [Listeria monocytogenes J2818] Length = 283 Score = 105 bits (263), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 82/247 (33%), Positives = 112/247 (45%), Gaps = 10/247 (4%) Query: 16 GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75 GLS ++ ++ L+ R L E + IL FY ++ D PR Sbjct: 34 GLSRSELWMEISRELEPNHEKQFEEDFARYLAGEPVQYILKTAPFYGYDFLVTEDVLIPR 93 Query: 76 PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135 PETE LV A AF ++K V +LD+ TG+G + +AL K P DIS AL Sbjct: 94 PETEELVACAEAF----LKKHPVKNVLDVCTGSGIIAIALKKAFPEISVTASDISAPALV 149 Query: 136 IAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDP 192 +A+ NA+ RF D L++ F E FD+IV+NPPYI + V +P Sbjct: 150 VARKNALLLNADVRFVETDLLEA--FKQNEERFDMIVANPPYISEAEKAEMSDYVLKNEP 207 Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE-SRKLFLVNAFK 251 ++L DGL+ Y D + LN VEIGY Q V ++FE S V K Sbjct: 208 SLALFAENDGLAIYERFVDNLKYVLNSSFWVGVEIGYTQGERVKQLFEKSYPHTTVVIHK 267 Query: 252 DYGGNDR 258 D DR Sbjct: 268 DINSKDR 274 >gi|300853433|ref|YP_003778417.1| putative modification methylase [Clostridium ljungdahlii DSM 13528] gi|300433548|gb|ADK13315.1| predicted modification methylase [Clostridium ljungdahlii DSM 13528] Length = 287 Score = 105 bits (263), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 69/216 (31%), Positives = 108/216 (50%), Gaps = 13/216 (6%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110 + ILG +F + + PRP+TE LV+ AL +I+ + I D+ GTG Sbjct: 75 VKYILGHCEFMGIDFIVKPGVLIPRPDTETLVEQALI----QIKHNNFHNICDVCCGTGI 130 Query: 111 VCLALLKESPFFKGVGV---DISCKALEIAKSNAVTNGVSERFDTLQS---DWFSSVEGL 164 + +++ K +G+ V DIS A E+ N + E+ ++S +++ E Sbjct: 131 IGISIAK---LIEGMNVKCCDISSTACEVTAENIRRFSLEEKVQVVKSNLMEYYIQNEVK 187 Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224 F +IVSNPPYI+ + L +V++++PR +L GG DGL YR I R L +G+ Sbjct: 188 FHMIVSNPPYIKESSIPTLMEDVKNYEPREALSGGKDGLEFYRKITKESLRVLESNGIIM 247 Query: 225 VEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 EIGY+Q+ V I + KD G DRV+ Sbjct: 248 FEIGYDQRESVSDILAQNGFKNIMCIKDLAGKDRVI 283 >gi|262038063|ref|ZP_06011468.1| methyltransferase [Leptotrichia goodfellowii F0264] gi|261747883|gb|EEY35317.1| methyltransferase [Leptotrichia goodfellowii F0264] Length = 367 Score = 105 bits (263), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 73/212 (34%), Positives = 112/212 (52%), Gaps = 6/212 (2%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110 + +L ++FY + +++ PR +TE+LV+ A+ R EK + +ILD+GTG+GA Sbjct: 153 VQYLLNEQEFYGRKFYVNTGVLIPRQDTEVLVEEAI--KTLRSEKTETPKILDIGTGSGA 210 Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSN-AVTNGVSERFDTLQSDWFSSVE-GLFDVI 168 + + L E P K +G DIS KALEI++ N ++ N + +F +SD F ++E FD+I Sbjct: 211 IGITLALEIPDSKIMGTDISDKALEISEKNKSLLNAENIKF--FKSDLFENIEYKKFDMI 268 Query: 169 VSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228 +SNPPYI S + + +P +L +GL YR I+ +L G E G Sbjct: 269 ISNPPYIASDETKVMSEDTLLHEPDEALFAEDEGLYFYREISFQGKEYLRNGGYMLFETG 328 Query: 229 YNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 Y Q V +I E VN KD RV+ Sbjct: 329 YKQAETVKKIMEITGYKNVNIIKDMQNIGRVV 360 >gi|16804580|ref|NP_466065.1| hypothetical protein lmo2542 [Listeria monocytogenes EGD-e] gi|224503218|ref|ZP_03671525.1| hypothetical protein LmonFR_11988 [Listeria monocytogenes FSL R2-561] gi|254831035|ref|ZP_05235690.1| hypothetical protein Lmon1_06733 [Listeria monocytogenes 10403S] gi|16412030|emb|CAD00620.1| lmo2542 [Listeria monocytogenes EGD-e] Length = 283 Score = 105 bits (263), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 82/247 (33%), Positives = 112/247 (45%), Gaps = 10/247 (4%) Query: 16 GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75 GLS ++ ++ L+ R L E + IL FY ++ D PR Sbjct: 34 GLSRSELWMEISRELEPNHEKQFEEDFARYLAGEPVQYILKTAPFYGYDFLVTEDVLIPR 93 Query: 76 PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135 PETE LV A AF ++K V +LD+ TG+G + +AL K P DIS AL Sbjct: 94 PETEELVACAEAF----LKKHPVKNVLDVCTGSGIIAIALKKAFPEISVTASDISAPALV 149 Query: 136 IAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDP 192 +A+ NA+ RF D L++ F E FD+IV+NPPYI + V +P Sbjct: 150 VARKNALLLNADVRFVETDLLEA--FKQNEERFDMIVANPPYISEAEKAEMSDYVLKNEP 207 Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE-SRKLFLVNAFK 251 ++L DGL+ Y D + LN VEIGY Q V ++FE S V K Sbjct: 208 SLALFAENDGLAIYERFVDNLKYVLNSSFWVGVEIGYTQGERVKQLFEKSYPHTTVVIHK 267 Query: 252 DYGGNDR 258 D DR Sbjct: 268 DINSKDR 274 >gi|121603685|ref|YP_981014.1| HemK family modification methylase [Polaromonas naphthalenivorans CJ2] gi|120592654|gb|ABM36093.1| [protein release factor]-glutamine N5-methyltransferase [Polaromonas naphthalenivorans CJ2] Length = 283 Score = 105 bits (263), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 73/224 (32%), Positives = 108/224 (48%), Gaps = 18/224 (8%) Query: 43 VRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALA-FSLPRIEKRDVVRI 101 +R E + I+G ++F+ + L + + PRP+TE LV+ +LA P + +++ Sbjct: 62 LRRASGEPLAYIVGGKEFFGLALQVDARVLVPRPDTETLVEWSLAVLKAPGLMPP--LKV 119 Query: 102 LDLGTGTGAVCLALLKESPFFKGVG-------VDISCKALEIAKSNAVTNGVSERFDTLQ 154 LDLGTG+GA+ LA+ K G VD S AL++A+ NA G++ F ++ Sbjct: 120 LDLGTGSGAIALAIAHS---LKATGREAQVTAVDASADALDVARENARRLGLAVAF--IE 174 Query: 155 SDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214 S W V G F +I SNPPYI S L +P +L G+DGL R I Sbjct: 175 SSWLQGVNGRFHLIASNPPYIASADPHLAALA---HEPLQALTAGMDGLDDIRDIIQQAP 231 Query: 215 RHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258 HL G +E GY+Q V + R V +D G +R Sbjct: 232 DHLLPGGWLLLEHGYDQAGRVRELLVQRGFLQVQGRQDLAGIER 275 >gi|197120813|ref|YP_002132764.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Anaeromyxobacter sp. K] gi|196170662|gb|ACG71635.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Anaeromyxobacter sp. K] Length = 286 Score = 105 bits (263), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 83/259 (32%), Positives = 120/259 (46%), Gaps = 24/259 (9%) Query: 7 SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66 +H+ C ++ +D D L + + + R + E + G RDFY Sbjct: 37 AHALRC-----ERMRLYLDFDRPLGEPELAAFRELVRRRAEGEPTAYLTGRRDFYGRPFL 91 Query: 67 LSSDTFEPRPETELLVDSALAFSLPRIEKRDVV----RILDLGTGTGAVCLALLKESPFF 122 + + PRPETEL++++A RD + LDL TG+GA+ ++L E P Sbjct: 92 VDARVLVPRPETELVLEAA----------RDALPEGGAALDLCTGSGALGVSLALERPGA 141 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD-WFSSVEG-LFDVIVSNPPYIESVIV 180 + V D+S AL +A NA G + D Q D W EG FDVIVSNPPY+ + Sbjct: 142 RVVATDLSADALAVAAENARALGAA--VDLRQGDLWAPLREGERFDVIVSNPPYVPRGEL 199 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 D L EVR +PR++LDGG DGLS R I +G L G +E+ + R+ Sbjct: 200 DTLPREVRR-EPRLALDGGPDGLSLLRRIVEGAPTRLVPGGTLVLEMHEGHLELLPRLCR 258 Query: 241 SRKLFLVNAFKDYGGNDRV 259 A +D G R+ Sbjct: 259 DAGFERAEARRDLAGLPRL 277 >gi|312887827|ref|ZP_07747414.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Mucilaginibacter paludis DSM 18603] gi|311299646|gb|EFQ76728.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Mucilaginibacter paludis DSM 18603] Length = 290 Score = 105 bits (263), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 77/251 (30%), Positives = 124/251 (49%), Gaps = 9/251 (3%) Query: 14 VTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFE 73 VTGLS Q+ + + Q LT+ + + ILG +FY + ++ Sbjct: 40 VTGLSKAQLRAFTGNEITTPQAEKLTDIANQLQTGIPLQYILGHTEFYGLNFQVNPSVLI 99 Query: 74 PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133 PRPETE LV+ + + R ++ ILD+GTG+G + + L K P + +DIS A Sbjct: 100 PRPETEELVEWIIQAAQERHQQE---AILDIGTGSGCIPVKLKKHLPDAEVSAIDISPAA 156 Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVIVDCLGLEVRDF 190 L+ AK NA NGV F +++D + VE + ++VSNPPY+ + + V + Sbjct: 157 LQTAKQNATLNGVDVAF--IEADILNPVEISFPQYSILVSNPPYVTEREKAHMHVNVLNN 214 Query: 191 DPRISL-DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249 +P ++L D L YR IAD +HL +GL EI N ++ + + + L + Sbjct: 215 EPHLALFVSDHDPLVFYRAIADFALQHLTSNGLLFFEINENLGQQMIDLLQDKNLKNIEL 274 Query: 250 FKDYGGNDRVL 260 +D G DR++ Sbjct: 275 RQDMRGKDRMI 285 >gi|217963354|ref|YP_002349032.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Listeria monocytogenes HCC23] gi|217332624|gb|ACK38418.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Listeria monocytogenes HCC23] gi|307572069|emb|CAR85248.1| modification methylase, HemK family [Listeria monocytogenes L99] Length = 283 Score = 105 bits (263), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 76/228 (33%), Positives = 106/228 (46%), Gaps = 9/228 (3%) Query: 16 GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75 GLS ++ ++ + L+ R L E + IL FY ++ D PR Sbjct: 34 GLSRSELWMEINRELEPNHEKQFEEDFARYLAGEPVQYILKTAPFYGYDFLVTEDVLIPR 93 Query: 76 PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135 PETE LV A F ++K V +LD+ TG+G + +AL K P DIS AL Sbjct: 94 PETEELVACAEDF----LKKHSVKNVLDVCTGSGIIAIALKKAFPEISMTASDISAPALA 149 Query: 136 IAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDP 192 +AK NA+ RF D L++ F E FD+IV+NPPYI + V +P Sbjct: 150 VAKKNALLLNADVRFVETDLLEA--FKQNEERFDMIVANPPYISEAEKAEMSDYVLKNEP 207 Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 ++L DGL+ Y D + LN VEIGY Q V ++FE Sbjct: 208 SLALFAENDGLAIYERFVDNLKYVLNSSFWVGVEIGYTQGERVKQLFE 255 >gi|255525834|ref|ZP_05392763.1| modification methylase, HemK family [Clostridium carboxidivorans P7] gi|255510477|gb|EET86788.1| modification methylase, HemK family [Clostridium carboxidivorans P7] Length = 290 Score = 105 bits (263), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 68/213 (31%), Positives = 110/213 (51%), Gaps = 7/213 (3%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110 I ILG +F + + PRP+TE+LV+ A+ I+++ + D+ G+GA Sbjct: 75 IKYILGECEFMGLDFYIKEGVLIPRPDTEVLVELAIKC----IKEQKLKNACDVCCGSGA 130 Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD---WFSSVEGLFDV 167 + +++ K K DIS A E+ N + + + ++SD +F + + FD+ Sbjct: 131 IGISIAKFVEDIKVKCSDISNIAYEVTLENIKRFELEHKVEVIKSDLLNYFINNKEKFDI 190 Query: 168 IVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227 I+SNPPYI ++ L +V++++P +L GG DGL YR I + LN +G EI Sbjct: 191 IISNPPYIREDVIPTLMEDVKNYEPYEALSGGQDGLDFYRKITLQSLKLLNNNGFLLFEI 250 Query: 228 GYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 GY+QK V I E ++ KD G DRV+ Sbjct: 251 GYDQKDSVSSILEQNGFTDISCIKDLAGKDRVI 283 >gi|149197696|ref|ZP_01874746.1| Methyltransferase [Lentisphaera araneosa HTCC2155] gi|149139266|gb|EDM27669.1| Methyltransferase [Lentisphaera araneosa HTCC2155] Length = 282 Score = 105 bits (263), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 68/237 (28%), Positives = 113/237 (47%), Gaps = 10/237 (4%) Query: 27 DSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL 86 D L + + + + R +HE + I G +FY + +++ PRPETE LVD A Sbjct: 47 DRPLSESELSSIREKLQRCARHEPVQYICGSTNFYGLEISVGPGVLIPRPETECLVDLAT 106 Query: 87 AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP-FFKGVGVDISCKALEIAKSNAVTNG 145 ++ ++LDL TG+G + +A+ ++ V DI KAL A+ N +T Sbjct: 107 KHI------KEGQKLLDLCTGSGCIPIAIQEQKKQSLSIVACDIEEKALNYAQEN-ITQN 159 Query: 146 VSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203 ++ + LQ D F+ + FD+I SNPPY+ +G +V +P +L DG+ Sbjct: 160 KTQNIELLQCDLFAKIANDIKFDLITSNPPYVSESERPEMGKDVLKHEPPSALFADHDGM 219 Query: 204 SHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 + IA +++ +EIG +Q + +FE+ V KDY DR+L Sbjct: 220 AIIERIAQEAPQYMEPKAYILIEIGASQGSRCLELFEASNYRNVEVVKDYSSRDRIL 276 >gi|307155020|ref|YP_003890404.1| modification methylase, HemK family [Cyanothece sp. PCC 7822] gi|306985248|gb|ADN17129.1| modification methylase, HemK family [Cyanothece sp. PCC 7822] Length = 299 Score = 105 bits (263), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 70/214 (32%), Positives = 108/214 (50%), Gaps = 10/214 (4%) Query: 57 WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV--RILDLGTGTGAVCLA 114 WR F ++ +S D PRPETE ++D L ++P D+ +DLGTG+GA+ L Sbjct: 89 WRKF---KIKVSPDVLIPRPETEYIIDIVLK-AIPESPLFDIASGNWVDLGTGSGAIALG 144 Query: 115 LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSN 171 L VD S AL+IA+ NA+ G +ER Q W++ +E G + +VSN Sbjct: 145 LADILTNATIYAVDRSRGALDIAEDNAIEWGFAERIHFKQGFWWTPLEFLRGQVNGMVSN 204 Query: 172 PPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231 PPYI + ++ L EV +P I+LDGG GL R + + +L G+ +E+ Q Sbjct: 205 PPYIPTELIATLDPEVAYHEPHIALDGGEGGLESIRYLIESSPPYLRSGGIWLIEMMAGQ 264 Query: 232 KVDVVRIFESRKLFL-VNAFKDYGGNDRVLLFCR 264 V ++ + + + F D+ G +R L R Sbjct: 265 AEQVAQLLACQGSYQNIQIFPDFAGIERFALAYR 298 >gi|167721409|ref|ZP_02404645.1| protein methyltransferase HemK [Burkholderia pseudomallei DM98] Length = 247 Score = 105 bits (263), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 80/247 (32%), Positives = 123/247 (49%), Gaps = 15/247 (6%) Query: 21 QVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETEL 80 Q+I D LD R R E I ++ G R+F+ + ++ D PRPETEL Sbjct: 1 QLITRADEPLDAAARARYLALQARRAAGEPIAQLTGAREFFGLEFDITPDVLIPRPETEL 60 Query: 81 LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140 LV++AL I+ +LDLGTG+GA+ +++ E P + ++ S AL++A+ N Sbjct: 61 LVETALDA----IDGIASPCVLDLGTGSGAIAVSIASERPDARVWALERSVAALDVARRN 116 Query: 141 A------VTNGVSERFDTLQSDWFSSVE-GL-FDVIVSNPPYIESVIVDCLGLEVRDFDP 192 A G RF L+SDW+++++ GL F V+VSNPPYI ++R F+P Sbjct: 117 ARKLLDPARAGGPLRF--LESDWYAALDPGLRFHVVVSNPPYIARHDPHLAEGDLR-FEP 173 Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKD 252 R +L DGL+ RTI G + G +E GY+Q V + ++ V + D Sbjct: 174 RGALTDENDGLAAIRTIVAGAHAFVAPGGALWLEHGYDQAAAVRALLDAAGFADVESRAD 233 Query: 253 YGGNDRV 259 +R Sbjct: 234 LASIERA 240 >gi|254993430|ref|ZP_05275620.1| HemK family modification methylase [Listeria monocytogenes FSL J2-064] Length = 283 Score = 105 bits (263), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 82/247 (33%), Positives = 111/247 (44%), Gaps = 10/247 (4%) Query: 16 GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75 GLS ++ ++ L+ R L E + IL FY ++ D PR Sbjct: 34 GLSRSELWMEISRELEPNHEKQFEEDFARYLAGEPVQYILKTAPFYGYDFLVTEDVLIPR 93 Query: 76 PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135 PETE LV A F ++K V +LD+ TG+G + +AL K P DIS AL Sbjct: 94 PETEELVACAEDF----LKKHSVKNVLDVCTGSGIIAIALKKAFPEISMTASDISAPALA 149 Query: 136 IAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDP 192 +AK NA+ RF D L++ F E FD+IV+NPPYI + V +P Sbjct: 150 VAKKNALLLNADVRFVETDLLEA--FKQNEERFDMIVANPPYISEAEKAEMSDYVLKNEP 207 Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE-SRKLFLVNAFK 251 ++L DGL+ Y D + LN VEIGY Q V ++FE S V K Sbjct: 208 SLALFAENDGLAIYERFVDNLQYVLNSSFWVGVEIGYTQGERVKQLFEKSYPHSTVIIHK 267 Query: 252 DYGGNDR 258 D DR Sbjct: 268 DINSKDR 274 >gi|285017272|ref|YP_003374983.1| methyltransferase hemk protein [Xanthomonas albilineans GPE PC73] gi|283472490|emb|CBA14995.1| probable methyltransferase hemk protein [Xanthomonas albilineans] Length = 277 Score = 105 bits (263), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 70/223 (31%), Positives = 112/223 (50%), Gaps = 7/223 (3%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101 + R + E + + G R F+ + L + T PR +TE LV+ +L R++ + R+ Sbjct: 57 VARRAQGEPVAYLTGRRGFWTLDLAVGPATLIPRADTERLVE----LALERLDMQPGRRV 112 Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 DLGTG+GA+ LAL E P + + D+S AL +A++N + +G+ W + Sbjct: 113 ADLGTGSGAIALALASERPRAQVLATDLSAAALAVAEANMLAHGL-HNVAFAHGAWLVPL 171 Query: 162 EGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220 G FD+I SNPPYI + ++R ++P +L G+DGL R I G HL Sbjct: 172 AGQRFDLIASNPPYIAAGDPHLTQGDLR-YEPLSALTSGVDGLDDIRQIVAGAPAHLRAG 230 Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFC 263 G +E G++Q V + + + V ++D DRV L C Sbjct: 231 GWLLLEHGWDQGNAVRALLTAARFIAVETYQDLELRDRVTLGC 273 >gi|256421259|ref|YP_003121912.1| modification methylase, HemK family [Chitinophaga pinensis DSM 2588] gi|256036167|gb|ACU59711.1| modification methylase, HemK family [Chitinophaga pinensis DSM 2588] Length = 286 Score = 105 bits (263), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 85/265 (32%), Positives = 123/265 (46%), Gaps = 11/265 (4%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 +A +H + VTG+S IV + L Q LT A+ L HE + ++G FY Sbjct: 22 EAANIAHIVMEYVTGMSKMDRIVYKERELTTEQTSQLTAAVKALLAHEPVQYVIGSSWFY 81 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 + L ++ PRPETE LV+ + R + +ILD+GTG+GA+ LA+ KE P Sbjct: 82 GMELLVNPHVLIPRPETEELVEWIVQDI--RTAQLSQPQILDIGTGSGAIPLAIKKELPQ 139 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESV 178 VD+S AL+ AK NAV + F D L ++ + +FD+IVSNPPYI Sbjct: 140 AHVQAVDVSKGALQTAKDNAVKQQLDVTFELVDILNKTAWTHLP-MFDIIVSNPPYICQR 198 Query: 179 IVDCLGLEVRDFDPRISL---DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235 + +V ++P ++L D D L YR I L G EI + Sbjct: 199 ESADMQEQVVSYEPSLALFVPDD--DALLFYREIGWMGKEKLKNGGALYFEINEAFGTET 256 Query: 236 VRIFESRKLFLVNAFKDYGGNDRVL 260 + E V KD G DR++ Sbjct: 257 AALLEGMGYLEVEIKKDLFGKDRMV 281 >gi|163755416|ref|ZP_02162536.1| putative protoporphyrinogen oxidase [Kordia algicida OT-1] gi|161324836|gb|EDP96165.1| putative protoporphyrinogen oxidase [Kordia algicida OT-1] Length = 289 Score = 105 bits (262), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 77/253 (30%), Positives = 122/253 (48%), Gaps = 11/253 (4%) Query: 16 GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75 L + +DP+ + Q + A+ + I ILG F+ + ++ T PR Sbjct: 36 NLERFTLALDPEFTISKEQETPMFQALSELKLEKPIQHILGKAHFFGLDFIVNEHTLIPR 95 Query: 76 PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135 PETE LV L ++ K +RILD+GTG+G + +AL K P +DIS +AL+ Sbjct: 96 PETEELVALILE-NIKYSSKSKNLRILDIGTGSGCIPIALKKNLPDANIFAIDISAEALK 154 Query: 136 IAKSNAVTNGVSERFDTLQSDWFS-------SVEGLFDVIVSNPPYIESVIVDCLGLEVR 188 +A+ NA N VS F +++D S S + FD+IVSNPPY+ ++ + V Sbjct: 155 VARKNAENNDVSVEF--VKADVLSLEDLNIFSEKKYFDIIVSNPPYVRNLEKAAMRKNVL 212 Query: 189 DFDPRISL-DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLV 247 D++P +L + L Y IAD HL K+G EI +++ + E + + Sbjct: 213 DYEPETALFVEDKNPLIFYDKIADLAKAHLVKNGSLYFEINQYLGKEMMELMEEKDFSTI 272 Query: 248 NAFKDYGGNDRVL 260 D G DR++ Sbjct: 273 ELHGDTFGVDRMI 285 >gi|319760482|ref|YP_004124420.1| protein methyltransferase HemK [Candidatus Blochmannia vafer str. BVAF] gi|318039196|gb|ADV33746.1| protein methyltransferase HemK [Candidatus Blochmannia vafer str. BVAF] Length = 281 Score = 105 bits (262), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 76/256 (29%), Positives = 122/256 (47%), Gaps = 8/256 (3%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L +VT S Q++ ++ L +Q L I R + E I I+G ++F+++ Sbjct: 24 DAELLLQKVTRKSKIQLLTFGETNLSFKQIQTLQLLINRRSQGEPIAHIIGVKEFWSLNF 83 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 +S F PRP+TE L++ L + D V ILDLGTG G + L L E P + Sbjct: 84 KVSPGVFIPRPDTECLIEQILNLNF----NSDNVEILDLGTGVGTIALTLASERPSWNIT 139 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCL 183 G++ +AL +A N + + + + +WF ++ FD+IVSNPPYI + L Sbjct: 140 GIEQQKQALSLAHKNKLLLDC-KNVNFIYGNWFKYLKNSKKFDLIVSNPPYINKKDLHWL 198 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 +V F+PR +L GLS I +L G +E G+NQ V + ++ Sbjct: 199 SKDVY-FEPRNALISKNSGLSDLMIICQYSKYYLCPSGWIFLEHGWNQGKQVRNLLSKQQ 257 Query: 244 LFLVNAFKDYGGNDRV 259 + DY +R+ Sbjct: 258 FINICTKFDYNNCERI 273 >gi|313606724|gb|EFR83442.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Listeria monocytogenes FSL F2-208] Length = 277 Score = 105 bits (262), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 82/247 (33%), Positives = 112/247 (45%), Gaps = 10/247 (4%) Query: 16 GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75 GLS ++ ++ + L+ R L E + IL FY ++ D PR Sbjct: 28 GLSRSELWMEINRELEPNHEKQFEEDFARYLAGEPVQYILKTAPFYGYDFLVTEDVLIPR 87 Query: 76 PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135 PETE LV A F ++K V +LD+ TG+G + +AL K P DIS AL Sbjct: 88 PETEELVACAEDF----LKKHPVKNVLDVCTGSGIIAIALKKAFPEISVTASDISAPALA 143 Query: 136 IAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDP 192 +AK NA+ RF D L++ F E FD+IV+NPPYI + V +P Sbjct: 144 VAKKNALLLNADVRFVETDLLEA--FKQNEERFDMIVANPPYISEAEKAEMSDYVLKNEP 201 Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE-SRKLFLVNAFK 251 ++L DGL+ Y D + LN VEIGY Q V ++FE S V K Sbjct: 202 SLALFAENDGLAIYERFVDNLKYVLNSSFWVGVEIGYTQGERVKQLFEKSYPHSTVIIHK 261 Query: 252 DYGGNDR 258 D DR Sbjct: 262 DINSKDR 268 >gi|332655313|ref|ZP_08421053.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Ruminococcaceae bacterium D16] gi|332515818|gb|EGJ45428.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Ruminococcaceae bacterium D16] Length = 287 Score = 105 bits (262), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 77/258 (29%), Positives = 118/258 (45%), Gaps = 6/258 (2%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 ++ +C S Q D + + + R L E + I+G +FY + L Sbjct: 27 EARELICYAADKSREQFYRDMPLYVSGEMERRVEELVQRRLAGEPVAYIVGEWEFYGLPL 86 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 +S+D PR +TE+L + + + E R+LDL G+G V LA+ +P + V Sbjct: 87 NISNDVLIPRIDTEVLAERGILRARAAGEG---ARVLDLCAGSGCVGLAIAANAPDCRVV 143 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWF---SSVEGLFDVIVSNPPYIESVIVDC 182 ++S AL + K N N ++ R L + +S FDVIVSNPPYI + ++ Sbjct: 144 LGELSEGALRVCKQNVRRNELNARVTCLSVNAMEPPASSLWDFDVIVSNPPYIPTGDIEG 203 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 L V+D++P ++LDGG DGL YR IA + G E+G Q DV I Sbjct: 204 LDHSVKDYEPHMALDGGADGLDFYRFIAAKWKNAIRLGGSLIFEVGIGQAPDVENILAQN 263 Query: 243 KLFLVNAFKDYGGNDRVL 260 + D G RV+ Sbjct: 264 GFEQIQTTADTQGIWRVV 281 >gi|126663423|ref|ZP_01734420.1| possible protoporphyrinogen oxidase [Flavobacteria bacterium BAL38] gi|126624371|gb|EAZ95062.1| possible protoporphyrinogen oxidase [Flavobacteria bacterium BAL38] Length = 293 Score = 105 bits (262), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 81/258 (31%), Positives = 133/258 (51%), Gaps = 29/258 (11%) Query: 22 VIVDPDSVL--DDRQRFFLTNAIVRSLKHES-IHRILGWRDFYNVRLTLSSDTFEPRPET 78 V ++P+ L DD +++ N+I+ L+ E I I G FY ++ ++ +T PRPET Sbjct: 42 VALNPNFELSEDDVEKW---NSILADLQQEKPIQYITGEAWFYGLQFEVNENTLIPRPET 98 Query: 79 ELLVDSALA-----FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133 E LV+ L + LP + ILD+GTG+G + ++L P +D+S KA Sbjct: 99 EELVEWILNSPITHYPLP-------ITILDIGTGSGCIPISLKANLPQANVSAIDVSEKA 151 Query: 134 LEIAKSNAVTNGVSERF---DTLQSDWFSSVEGL-------FDVIVSNPPYIESVIVDCL 183 LE+AK NAV+N V F + L+ + S + F++IVSNPPY+ ++ + Sbjct: 152 LEVAKRNAVSNKVEINFIQTNILEVEDLSQLPSPNFHHPSSFNIIVSNPPYVRNLEKQEI 211 Query: 184 GLEVRDFDPRISL-DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 V D++P ++L D L YR IA ++L+ +GL EI + V + ++ Sbjct: 212 KKNVLDYEPHLALFVENTDALLFYRKIAQLALKNLSPNGLLFFEINQYLGKETVELLKNL 271 Query: 243 KLFLVNAFKDYGGNDRVL 260 ++ KD GNDR++ Sbjct: 272 GFKNIDLKKDIYGNDRMI 289 >gi|296876521|ref|ZP_06900572.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Streptococcus parasanguinis ATCC 15912] gi|296432514|gb|EFH18310.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Streptococcus parasanguinis ATCC 15912] Length = 276 Score = 105 bits (262), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 78/230 (33%), Positives = 113/230 (49%), Gaps = 17/230 (7%) Query: 38 LTNAIVRSLKHE-SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR 96 L ++I LKH I+G +F T+ PRPETE LV L E+ Sbjct: 54 LLDSIFEQLKHHVPAQYIIGSAEFCGHVFTVDERVLIPRPETEELVTLIL-------EEN 106 Query: 97 D--VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154 D +R+LD+GTG+GA+ ++L P ++ D+S +AL +A+ NA F + Sbjct: 107 DEKALRVLDIGTGSGAIAISLALAKPTWQVQASDVSEEALALAQKNAKQLEAFLEFKS-- 164 Query: 155 SDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214 SD + G +D+IVSNPPYI V+ +G V +P ++L DG + Y IA Sbjct: 165 SDVLEQLAGPYDLIVSNPPYISRDDVEEVGANVLASEPHLALFADRDGYAIYEKIAQQAP 224 Query: 215 RHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL---VNAFKDYGGNDRVLL 261 L DG +EIGY Q V +F R+ F V KD G DR+++ Sbjct: 225 SVLTPDGKIYLEIGYKQGAKVKELF--REAFPDKRVRVLKDQFGQDRMVV 272 >gi|257066245|ref|YP_003152501.1| modification methylase, HemK family [Anaerococcus prevotii DSM 20548] gi|256798125|gb|ACV28780.1| modification methylase, HemK family [Anaerococcus prevotii DSM 20548] Length = 262 Score = 105 bits (262), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 74/251 (29%), Positives = 118/251 (47%), Gaps = 8/251 (3%) Query: 11 LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70 L + + VI+ + LD L + + + + +G +FY + + Sbjct: 16 LTYLLDTNKSSVILKSEEELDSEISLKLDQILKKYSEGYPLQYAIGEWEFYGLNFKVDER 75 Query: 71 TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130 PR ETE++VD F + K++ RILD+GTG+GA+ ++L + P + +G DI Sbjct: 76 ALIPRFETEIIVD----FIIKSPYKKN--RILDIGTGSGAISISLARNLPTSEIIGSDIE 129 Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDF 190 KAL +A+ N S ++SD F + FD+I+SNPPYI D L E Sbjct: 130 EKALSLARENKKRLKAS-NVSFIKSDLFEEISEKFDIIISNPPYINQTDYDKLD-ERLYH 187 Query: 191 DPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAF 250 +P+ +L DGL Y+ I + +LN G EIGY+QK + + + Sbjct: 188 EPKSALLASEDGLYFYKRIIKEANSYLNDGGRLVFEIGYDQKQRICELLNESDFKNIKCM 247 Query: 251 KDYGGNDRVLL 261 KDY DR ++ Sbjct: 248 KDYNDFDRFII 258 >gi|312383011|gb|EFR28253.1| hypothetical protein AND_04041 [Anopheles darlingi] Length = 348 Score = 105 bits (262), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 69/211 (32%), Positives = 113/211 (53%), Gaps = 14/211 (6%) Query: 57 WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116 W DF ++ L + F PRPETE LV+ L +++ + L++G+G+GA+ L++L Sbjct: 135 W-DFRDLTLKMIPPVFIPRPETEELVE----LILQQMDSQKETFFLEIGSGSGAISLSIL 189 Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERF----DTLQSDWFSSVEG-LFDVIVSN 171 K P G+ +D S A E+ + NA G+ R L +D ++ G FD+IVSN Sbjct: 190 KHVPKSSGIAIDQSRLACELTRENAAAVGLDSRLRIFKHKLINDLPDTLAGEQFDMIVSN 249 Query: 172 PPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231 PPY+ SV++ L E++ ++ +LDGG DGL+ + I S+HL KDG+ +E+ + Sbjct: 250 PPYVPSVLLPTLEPEIKIYEDLRALDGGNDGLTVIKAILRIASKHLTKDGVLWLEVDISH 309 Query: 232 KVDVVRIF----ESRKLFLVNAFKDYGGNDR 258 + + + L V ++KD DR Sbjct: 310 PPVIEKFLAQHGDKMGLRFVASYKDLFQKDR 340 >gi|289423625|ref|ZP_06425425.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Peptostreptococcus anaerobius 653-L] gi|289155993|gb|EFD04658.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Peptostreptococcus anaerobius 653-L] Length = 302 Score = 105 bits (262), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 72/276 (26%), Positives = 136/276 (49%), Gaps = 16/276 (5%) Query: 1 MQALRDSHS--------FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIH 52 M L+DS LC+V ++++ D + + + + + I Sbjct: 19 MDKLKDSSPSPRLDVDLMLCKVMDFDRMKLMMSYDKPMHPEEIKEFERMLEQRSMRKPIA 78 Query: 53 RILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAF--SLPRIEKRDVVRILDLGTGTGA 110 I+ ++F + ++ + PRP+TE++V+ L P+ + ++I+D+ G+GA Sbjct: 79 YIINEKEFMGLNFYVNENVLIPRPDTEIIVEEVLDIIDRAPKEGENGPIKIMDMCLGSGA 138 Query: 111 VCLALLKESPF-FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-----GL 164 + L++ K S + GVDIS +A+++A+ N G+ D ++SD FSS + Sbjct: 139 IALSIAKLSSVDLQICGVDISKEAIDVARVNRRRLGLGACVDFVESDLFSSSDLEVYLDS 198 Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224 D++VSNPPYIE +++ L +V+D++P ++L GG DG+ Y++I + L G Sbjct: 199 LDILVSNPPYIEDHVIEGLEPDVKDYEPILALAGGDDGMDFYKSIIKSSPKFLKIGGWLV 258 Query: 225 VEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 E G++Q + E + KD G +R++ Sbjct: 259 FESGHDQAEKIKNEMEKVGFDCLYFKKDLQGYNRMV 294 >gi|91786751|ref|YP_547703.1| HemK family modification methylase [Polaromonas sp. JS666] gi|91695976|gb|ABE42805.1| [protein release factor]-glutamine N5-methyltransferase [Polaromonas sp. JS666] Length = 287 Score = 105 bits (262), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 81/242 (33%), Positives = 112/242 (46%), Gaps = 19/242 (7%) Query: 25 DPDSVLDD---RQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELL 81 D D + D+ R R F +R + E + I+G ++F+ + L + + PRP+TE L Sbjct: 49 DTDQLTDEVAQRMRAF----SLRRARGEPLAYIVGSKEFFGLELQVDARVLVPRPDTETL 104 Query: 82 VDSAL-AFSLPRIEKRDVVRILDLGTGTGAVCLA----LLKESPFFKGVGVDISCKALEI 136 V +L P + +R +ILDLGTG+GA+ LA L + V VD S AL + Sbjct: 105 VHWSLEVLQAPAMTERP--QILDLGTGSGAIALAIAHSLQAAGRPARVVAVDASAGALAV 162 Query: 137 AKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL 196 A+ NA + F QS+W V G F +I SNPPYI S + L +P SL Sbjct: 163 ARENARRLQLELEFS--QSNWLDEVGGHFHLIASNPPYIASADPHLVALA---HEPLGSL 217 Query: 197 DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGN 256 G DGL R I HL G +E GY+Q V + R V + D G Sbjct: 218 AAGPDGLGDIRQIVAKAPEHLAPGGWLLLEHGYDQAAAVRGLLRERGFAQVQSRLDLAGI 277 Query: 257 DR 258 R Sbjct: 278 AR 279 >gi|58617581|ref|YP_196780.1| bifunctional methyltransferase HemK/tRNA (guanine-N(7)-)-methyltransferase protoporphyrinogen oxidase [Ehrlichia ruminantium str. Gardel] gi|58417193|emb|CAI28306.1| Bifunctional methyltransferase-hemK proteinhomolog and tRNA (guanine-N(7)-)-methyltransferase protoporphyrinogen oxidase (hemK) [Ehrlichia ruminantium str. Gardel] Length = 280 Score = 105 bits (261), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 66/210 (31%), Positives = 111/210 (52%), Gaps = 4/210 (1%) Query: 22 VIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELL 81 V+ DP L+ + + + + I I+G R+F+++ ++S +PRP++E + Sbjct: 42 VVKDPYISLNKTDTEIFWDMVKKRALNVPISHIIGKREFWSMDFIVNSHVLDPRPDSESI 101 Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 + + F++ + R +V I D GTGTG + LL G+ V+ + KA +A N Sbjct: 102 ISAV--FTMYPCKNRRLV-IGDFGTGTGCLLTVLLSYYKLAVGIAVEKNVKAYRVAYQNF 158 Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201 + V R S W + E + D+IVSNPPYI + L EV+ ++P ++LDGG Sbjct: 159 KNHKVYNRIKMRLSSWNTCYE-MCDLIVSNPPYIRRNKIMTLQPEVKLYEPYVALDGGPV 217 Query: 202 GLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231 GL +Y +I + R L K+G+ +EIG +Q Sbjct: 218 GLENYFSIFVVIKRCLKKNGVAVLEIGEDQ 247 >gi|57239542|ref|YP_180678.1| bifunctional methyltransferase HemK/tRNA (guanine-N(7)-)-methyltransferase protoporphyrinogen oxidase [Ehrlichia ruminantium str. Welgevonden] gi|58579527|ref|YP_197739.1| bifunctional methyltransferase HemK/tRNA (guanine-N(7)-)-methyltransferase protoporphyrinogen oxidase [Ehrlichia ruminantium str. Welgevonden] gi|57161621|emb|CAH58549.1| putative methyltransferase [Ehrlichia ruminantium str. Welgevonden] gi|58418153|emb|CAI27357.1| Bifunctional methyltransferase-hemK proteinhomolog and tRNA (guanine-N(7)-)-methyltransferase protoporphyrinogen oxidase (hemK) [Ehrlichia ruminantium str. Welgevonden] Length = 280 Score = 105 bits (261), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 66/210 (31%), Positives = 111/210 (52%), Gaps = 4/210 (1%) Query: 22 VIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELL 81 V+ DP L+ + + + + I I+G R+F+++ ++S +PRP++E + Sbjct: 42 VVKDPYISLNKTDTEIFWDMVKKRALNVPISHIIGKREFWSMDFIVNSHVLDPRPDSESI 101 Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 + + F++ + R +V I D GTGTG + LL G+ V+ + KA +A N Sbjct: 102 ISAV--FTMYPCKNRRLV-IGDFGTGTGCLLTVLLSYYKLAVGIAVEKNVKAYRVAYQNF 158 Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201 + V R S W + E + D+IVSNPPYI + L EV+ ++P ++LDGG Sbjct: 159 KNHKVYNRIKMRLSSWNTCYE-MCDLIVSNPPYIRRNKIMTLQPEVKLYEPYVALDGGPV 217 Query: 202 GLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231 GL +Y +I + R L K+G+ +EIG +Q Sbjct: 218 GLENYFSIFVVIKRCLKKNGVAVLEIGEDQ 247 >gi|218289203|ref|ZP_03493438.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Alicyclobacillus acidocaldarius LAA1] gi|218240551|gb|EED07731.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Alicyclobacillus acidocaldarius LAA1] Length = 266 Score = 105 bits (261), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 70/198 (35%), Positives = 108/198 (54%), Gaps = 24/198 (12%) Query: 46 LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLG 105 ++ E + +LG +DFY + D PRP+TE+LV+ A+ F L R+ R++D+G Sbjct: 80 VQGEPLAYVLGKQDFYGRTFEVGPDCLIPRPDTEVLVEEAIRF-LKRMPSG--TRVIDVG 136 Query: 106 TGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS--VEG 163 TG+G + +++ P VD+S AL +A+ NA ER + DW ++ +E Sbjct: 137 TGSGCIAVSIALACPGVSVTAVDLSVDALAVARRNA------ERLGAV-VDWAAADGIEW 189 Query: 164 LFD---------VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214 L + IVSNPPYI + +D L VRD++PR++LDGG DGL YR IA + Sbjct: 190 LIERAERGRPWHAIVSNPPYIPTSEIDQLEPSVRDYEPRLALDGGEDGLQFYRRIA-ALP 248 Query: 215 RHLNKDGLCSV--EIGYN 230 ++ G V E+G+N Sbjct: 249 PYVLARGRAGVFLEVGHN 266 >gi|225848847|ref|YP_002729011.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Sulfurihydrogenibium azorense Az-Fu1] gi|225644266|gb|ACN99316.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Sulfurihydrogenibium azorense Az-Fu1] Length = 282 Score = 105 bits (261), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 75/259 (28%), Positives = 120/259 (46%), Gaps = 12/259 (4%) Query: 11 LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70 L + + H++ DPD + D Q N ++ K + ++ ++F+ + + Sbjct: 30 LQEILKIPKHKIFTDPDLEIKDYQE--AINVALQRSKKVPLGYLIKKKEFFGLEFYIEEG 87 Query: 71 TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130 PRPETE+LV+ L ++E L++G G+G + ++LL K +DIS Sbjct: 88 VLIPRPETEVLVEKVLH----QLENLKNPLGLEVGVGSGCISVSLLYNKKDLKMYALDIS 143 Query: 131 CKALEIAKSNAVTNGVSER-----FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185 KAL+I K NA + +R FD ++ D D +VSNPPYI + L Sbjct: 144 EKALKITKINAEKYDLLDRLTLIKFDVMKDDVKDLNLDRLDFVVSNPPYISEDEYESLPE 203 Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245 EV+ +P+ +L G G Y I + +L + G + EIG NQ V I E Sbjct: 204 EVKK-EPKEALISGKVGTEFYEKIVEKFKNYLKEYGFFAFEIGINQAEKVKSILERNGFK 262 Query: 246 LVNAFKDYGGNDRVLLFCR 264 + +KD G DRVL+ + Sbjct: 263 NIKIYKDLAGIDRVLIASK 281 >gi|254825335|ref|ZP_05230336.1| modification methylase [Listeria monocytogenes FSL J1-194] gi|254932216|ref|ZP_05265575.1| modification methylase [Listeria monocytogenes HPB2262] gi|255519762|ref|ZP_05386999.1| HemK family modification methylase [Listeria monocytogenes FSL J1-175] gi|293583771|gb|EFF95803.1| modification methylase [Listeria monocytogenes HPB2262] gi|293594578|gb|EFG02339.1| modification methylase [Listeria monocytogenes FSL J1-194] gi|328465146|gb|EGF36414.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Listeria monocytogenes 1816] gi|328471150|gb|EGF42054.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Listeria monocytogenes 220] gi|332312972|gb|EGJ26067.1| Modification methylase [Listeria monocytogenes str. Scott A] Length = 283 Score = 105 bits (261), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 82/247 (33%), Positives = 111/247 (44%), Gaps = 10/247 (4%) Query: 16 GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75 GLS ++ ++ L+ R L E + IL FY ++ D PR Sbjct: 34 GLSRSELWMEISRELEPNHEKQFEEDFARYLAGEPVQYILKTAPFYGYDFLVTEDVLIPR 93 Query: 76 PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135 PETE LV A F ++K V +LD+ TG+G + +AL K P DIS AL Sbjct: 94 PETEELVACAEDF----LKKHPVKNVLDVCTGSGIIAIALKKAFPDISMTASDISAPALA 149 Query: 136 IAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDP 192 +AK NA+ RF D L++ F E FD+IV+NPPYI + V +P Sbjct: 150 VAKKNALLLNADVRFVETDLLEA--FKQNEERFDMIVANPPYISEAEKAEMSDYVLKNEP 207 Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE-SRKLFLVNAFK 251 ++L DGL+ Y D + LN VEIGY Q V ++FE S V K Sbjct: 208 SLALFAENDGLAIYERFVDNLQYVLNSSFWVGVEIGYTQGERVKQLFEKSYPHSTVIIHK 267 Query: 252 DYGGNDR 258 D DR Sbjct: 268 DINSKDR 274 >gi|46908714|ref|YP_015103.1| HemK family modification methylase [Listeria monocytogenes serotype 4b str. F2365] gi|46881986|gb|AAT05280.1| modification methylase, HemK family [Listeria monocytogenes serotype 4b str. F2365] Length = 283 Score = 105 bits (261), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 82/247 (33%), Positives = 111/247 (44%), Gaps = 10/247 (4%) Query: 16 GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75 GLS ++ ++ L+ R L E + IL FY ++ D PR Sbjct: 34 GLSRSELWMEISRELEPNHEKQFEEDFARYLAGEPVQYILKTAPFYGYDFLVTEDVLIPR 93 Query: 76 PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135 PETE LV A F ++K V +LD+ TG+G + +AL K P DIS AL Sbjct: 94 PETEELVACAEDF----LKKHPVKNVLDVCTGSGIIAIALKKAFPDISMTASDISAPALA 149 Query: 136 IAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDP 192 +AK NA+ RF D L++ F E FD+IV+NPPYI + V +P Sbjct: 150 VAKKNALLLNADVRFVETDLLEA--FKQNEERFDMIVANPPYISEAEKAEMSDYVLKNEP 207 Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE-SRKLFLVNAFK 251 ++L DGL+ Y D + LN VEIGY Q V ++FE S V K Sbjct: 208 SLALFAENDGLAIYERFVDNLQYVLNSSFWVGVEIGYTQGERVKQLFEKSYPHSTVIIHK 267 Query: 252 DYGGNDR 258 D DR Sbjct: 268 DINSKDR 274 >gi|237755640|ref|ZP_04584253.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Sulfurihydrogenibium yellowstonense SS-5] gi|237692204|gb|EEP61199.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Sulfurihydrogenibium yellowstonense SS-5] Length = 291 Score = 105 bits (261), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 78/271 (28%), Positives = 127/271 (46%), Gaps = 23/271 (8%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHES---IHRILGWRDFYN 62 ++ + ++ L H +I PD + + +V S K S + + ++F+ Sbjct: 25 EASILISKILDLPKHYIISYPDLEISEEDA---KKLVVLSEKRASGYPMAYLTKSKEFFG 81 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI----LDLGTGTGAVCLALLKE 118 + + PRPETE+LV+ IEK + L++G G+G + ++LLK Sbjct: 82 LDFYIEEGILIPRPETEILVEKV-------IEKLQNAKGELIGLEVGIGSGCISVSLLKN 134 Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSER-----FDTLQSDWFSSVEGLFDVIVSNPP 173 K +G+DIS KALEI + NA +GV +R FD + S D +VSNPP Sbjct: 135 IKNLKIIGIDISEKALEITEKNAEIHGVLDRLKLFKFDIMNEKMNSLNLPKLDFVVSNPP 194 Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233 YI+ L EV+ +P+ +L G +G Y I + + L +DG + E+G Q Sbjct: 195 YIKEEDYQKLQKEVKK-EPKEALISGKEGTEFYEKIVNSLKDFLKEDGFFAFEVGIGQAE 253 Query: 234 DVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 V +I E + +KD G DRV++ + Sbjct: 254 KVKQILEDNGYKNIEIYKDLAGIDRVIIASK 284 >gi|313205777|ref|YP_004044954.1| protein-(glutamine-n5) methyltransferase, release factor-specific [Riemerella anatipestifer DSM 15868] gi|312445093|gb|ADQ81448.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Riemerella anatipestifer DSM 15868] Length = 281 Score = 105 bits (261), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 71/225 (31%), Positives = 117/225 (52%), Gaps = 7/225 (3%) Query: 39 TNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV 98 T AI + + +ILG DF+ ++ ++ PRPETE L+D A+ ++ + + Sbjct: 59 TKAINQLKSGKPYQQILGEADFFGMKFCVNQHVLIPRPETEELLDYAIK-TISKEFSKTE 117 Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 ++ILD+GTG+G + + L K P + +D S +AL IAK NA + +F + D+ Sbjct: 118 IKILDIGTGSGVIPIVLKKHFPNARVASIDFSKEALTIAKKNAERHHTEIKF--ILDDYL 175 Query: 159 S-SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI-DGLSHYRTIADGVSRH 216 + ++ +DVI+SNPPYI V + V++F+P ++L D L YR IA + Sbjct: 176 NYTLPTHYDVIISNPPYIGIEEVSEISDTVKNFEPHLALFSPCSDPLVFYRKIATDAKHY 235 Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 LN G +EI NQK+ + + KD NDR+++ Sbjct: 236 LNNGGFLFLEI--NQKLGAETLALYKDFSDAQLIKDLSNNDRMII 278 >gi|319789798|ref|YP_004151431.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Thermovibrio ammonificans HB-1] gi|317114300|gb|ADU96790.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Thermovibrio ammonificans HB-1] Length = 283 Score = 105 bits (261), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 81/261 (31%), Positives = 127/261 (48%), Gaps = 15/261 (5%) Query: 6 DSHSFLCRVTGLSSH-QVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 D+ L GL ++ D L D + IVR K E + I G ++FY Sbjct: 27 DAELLLVHSLGLKGRVELYTQFDRPLTDDEVERYRQLIVRRAKGEPVAYITGKKEFYGFE 86 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK----ESP 120 + PRPETELLVD AL++ ++ + ++D+GTG+G V L L K + Sbjct: 87 FLVDRGVLVPRPETELLVDVALSY----LKGKQGKTVVDVGTGSGCVILTLCKLLGDANR 142 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180 ++ GVD+S KALE+A+ N G S F L+S+ +V+ D +V+N PY+ V Sbjct: 143 YY---GVDLSPKALEVAEKNRERLGCSVTF--LRSNLLEAVDFPVDAVVANLPYV-PVGD 196 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 L V ++P ++L GG DGL + +N G ++E+G Q V + E Sbjct: 197 KRLHKWVLKYEPAMALFGGKDGLELIERLIVQAKEKINPKGFIALEVGEGQADRVKSLLE 256 Query: 241 SRKLFLVNAFKDYGGNDRVLL 261 + V +F+D G +RV++ Sbjct: 257 TAGFLNVKSFRDLSGIERVVV 277 >gi|213962836|ref|ZP_03391096.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Capnocytophaga sputigena Capno] gi|213954493|gb|EEB65815.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Capnocytophaga sputigena Capno] Length = 287 Score = 105 bits (261), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 74/243 (30%), Positives = 122/243 (50%), Gaps = 10/243 (4%) Query: 22 VIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELL 81 V+ + D++L D + + AI + I ILG +F++ R + + PRPETE L Sbjct: 42 VLANADTLLTDDIKQSIQQAITELQTAKPIQYILGETEFFSNRFFVDENVLIPRPETEEL 101 Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 VD L + P +K + ILD+GTG+G + ++L K P +D+S KA+ +A+ NA Sbjct: 102 VDWVLQ-TYP--DKNYPLHILDIGTGSGCIPISLAKALPKSVVTAIDVSPKAITVAQRNA 158 Query: 142 VTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG 198 NGV +F D LQ+ ++ +DVI+SNPPY+ + + V ++P ++L Sbjct: 159 DRNGVKIQFLQCDILQT---KTLPQKYDVIISNPPYVRELEKTEMHSNVLSYEPHLALFV 215 Query: 199 GID-GLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGND 257 + L Y IA R+L +G EI ++ + + + +D GND Sbjct: 216 PNERPLLFYEQIASLAQRYLKPEGSLFFEINQYLAAEMQAMLTQKNFAEIILRQDLSGND 275 Query: 258 RVL 260 R+L Sbjct: 276 RML 278 >gi|300777693|ref|ZP_07087551.1| protein-(glutamine-N5) methyltransferase [Chryseobacterium gleum ATCC 35910] gi|300503203|gb|EFK34343.1| protein-(glutamine-N5) methyltransferase [Chryseobacterium gleum ATCC 35910] Length = 282 Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 73/217 (33%), Positives = 116/217 (53%), Gaps = 18/217 (8%) Query: 52 HRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL-AFSLPRIEKRDVVRILDLGTGTGA 110 +ILG +FY ++ + + PRPETE L++ A+ + + +D+ +ILD+GTG+G Sbjct: 72 QQILGETEFYGMKFFVDENVLIPRPETEELLEIAIREIKNSKFKDQDI-KILDIGTGSGI 130 Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIV 169 + L L K P VD S KAL AK NA + + F + +D+ + G +D+I+ Sbjct: 131 ISLVLKKYFPEAHISSVDFSEKALNTAKRNAEYHQLEINF--IHADYLNYEPGEDYDIII 188 Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISL-DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228 SNPPYI + V++F+P+++L D L YR IA+ ++L++DGL +EI Sbjct: 189 SNPPYIGIEEEIEIADSVKEFEPKMALFSPTADALIFYRKIAEDAKKYLSEDGLLFLEI- 247 Query: 229 YNQK-----VDVVRIFESRKLFLVNAFKDYGGNDRVL 260 NQK +D+ F + V KD NDR + Sbjct: 248 -NQKLGPETLDLYHYFSN-----VQLLKDLSENDRFI 278 >gi|269123394|ref|YP_003305971.1| modification methylase, HemK family [Streptobacillus moniliformis DSM 12112] gi|268314720|gb|ACZ01094.1| modification methylase, HemK family [Streptobacillus moniliformis DSM 12112] Length = 359 Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 76/209 (36%), Positives = 104/209 (49%), Gaps = 6/209 (2%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110 I I + FY + + PR +TE +V+ AL I K + ++LD+GTG+GA Sbjct: 147 IQYIFNEQVFYGYSFYVDKNVLIPRIDTEFVVEKALEL----INKINNPKVLDIGTGSGA 202 Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIV 169 + L + E+ K + DIS AL+IAK N+ V E L SD FS V FD+IV Sbjct: 203 IALVIGLENRESKILATDISENALKIAKKNSEILNV-ENVKFLHSDLFSEVSYKEFDLIV 261 Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY 229 SNPPYI + +G V +P+ +L GL Y I+ HL DG EIGY Sbjct: 262 SNPPYISRDEIGIMGENVLLHEPQNALFAEDGGLYFYFEISKNAKNHLKNDGYLLFEIGY 321 Query: 230 NQKVDVVRIFESRKLFLVNAFKDYGGNDR 258 +Q V I E+ V+ KD GN+R Sbjct: 322 SQGNKVKDIMENMGYIDVSIGKDLTGNER 350 >gi|298493041|ref|YP_003723218.1| protein-(glutamine-N5) methyltransferase ['Nostoc azollae' 0708] gi|298234959|gb|ADI66095.1| protein-(glutamine-N5) methyltransferase, release factor-specific ['Nostoc azollae' 0708] Length = 299 Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 75/218 (34%), Positives = 114/218 (52%), Gaps = 11/218 (5%) Query: 46 LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLG 105 L + I + WR F +L +SS PRPETE+L+D A+A ++ + DLG Sbjct: 80 LPVQYIAGVTPWRMF---KLAVSSAVLIPRPETEMLIDLAVAAAVSGGVQSG--HWADLG 134 Query: 106 TGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--- 162 TG+GA+ L L + VD S +AL +AK+NA G E+ QS W+ +E Sbjct: 135 TGSGAIALGLAEVLINATIHAVDFSPEALAVAKTNAENVGFGEQVKFYQSSWWEPLESLK 194 Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL 222 G F +VSNPPYI + V L EV +P ++LDGG DGL R + + +L G+ Sbjct: 195 GQFSGMVSNPPYIPTDTVLTLQPEVLKHEPHLALDGGADGLDCIRHLIEVSPAYLRPGGV 254 Query: 223 CSVEIGYNQKVDVVR-IFESRKLFL-VNAFKDYGGNDR 258 +E+ Q D+VR + E++ + ++ +D G +R Sbjct: 255 WLIEMMAGQ-ADIVRELLENKGHYCNISIHRDLAGIER 291 >gi|315022825|gb|EFT35849.1| putative protoporphyrinogen oxidase [Riemerella anatipestifer RA-YM] gi|325336782|gb|ADZ13056.1| Methylase of polypeptide chain release factor [Riemerella anatipestifer RA-GD] Length = 281 Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 72/225 (32%), Positives = 115/225 (51%), Gaps = 7/225 (3%) Query: 39 TNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV 98 T AI + + +ILG DF+ ++ ++ PRPETE L+D A+ ++ + + Sbjct: 59 TEAINQLKSGKPYQQILGEADFFGMKFCVNQHVLIPRPETEELLDYAIK-TISKEFSQTE 117 Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 ++ILD+GTG+G + + L K P + +D S +AL IAK NA + F + D+ Sbjct: 118 IKILDIGTGSGVIPIVLKKHFPNARITSIDFSKEALVIAKKNAERHHTEIEF--ILDDYL 175 Query: 159 S-SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL-DGGIDGLSHYRTIADGVSRH 216 + + +DVI+SNPPYI V + V++F+P ++L D L YR IA H Sbjct: 176 NYKLPTHYDVIISNPPYIGIEEVSEISDTVKNFEPHLALFSPCADPLVFYRKIATDAKHH 235 Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 LN G +EI NQK+ + + KD NDR+++ Sbjct: 236 LNNGGFLFLEI--NQKLGAETLALYKYFSDAQLIKDLSNNDRMII 278 >gi|466533|dbj|BAA05915.1| possibly protoporphyrinogen oxidase [Escherichia coli] Length = 225 Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 75/190 (39%), Positives = 103/190 (54%), Gaps = 8/190 (4%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 RD+ L VTG ++ ++ L D Q L + R E I + G R+F+++ Sbjct: 22 RDAEILLEHVTGRGRTFILAFGETQLTDEQCQQLDALLTRRRDGEPIAHLTGVREFWSLP 81 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L +S T PRP+TE LV+ ALA LP RILDLGTGTGA+ LAL E P + Sbjct: 82 LFVSPATLIPRPDTECLVEQALA-RLP----EQPCRILDLGTGTGAIALALASERPDCEI 136 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183 + VD A+ +A+ NA + + LQSDWFS++ G F +IVSNPPYI+ Sbjct: 137 IAVDRMPDAVSLAQRNAQHLAI-KNIHILQSDWFSALAGQQFAMIVSNPPYIDEQDPHLQ 195 Query: 184 GLEVRDFDPR 193 +VR F+PR Sbjct: 196 QGDVR-FEPR 204 >gi|260063120|ref|YP_003196200.1| putative protoporphyrinogen oxidase [Robiginitalea biformata HTCC2501] gi|88784689|gb|EAR15859.1| putative protoporphyrinogen oxidase [Robiginitalea biformata HTCC2501] Length = 304 Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 81/249 (32%), Positives = 117/249 (46%), Gaps = 15/249 (6%) Query: 24 VDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVD 83 ++P +L + L NA+ + + + I G F ++ L + PRPETE LV Sbjct: 44 LEPGKMLTREEEAPLFNALSQLAAGQPVQYITGTARFLDMDLRVGPGALIPRPETEELVR 103 Query: 84 SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143 L + + + ILD+GTG+G + L L K P + +DIS +ALE+A+ NA Sbjct: 104 WVLERHAADLREGN---ILDIGTGSGCIALGLAKSLPAARVTALDISGEALEVARENARH 160 Query: 144 NGVSERF-----DTLQSDWFSSV---EGL---FDVIVSNPPYIESVIVDCLGLEVRDFDP 192 G+ R + +W S+ EG +D+I+SNPPYI L + VRD +P Sbjct: 161 LGLDVRLVRADIRNPEGEWPESILNPEGEWPGYDLIISNPPYIPRGQEGQLAVHVRDHEP 220 Query: 193 RISL-DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK 251 R +L D L +YR IA RHL G VEI + +F L V+ K Sbjct: 221 REALFAPDSDPLLYYRHIAGFSRRHLRGGGWLYVEIHEDFGAPTAELFREAGLLEVSLKK 280 Query: 252 DYGGNDRVL 260 D G DR L Sbjct: 281 DIFGKDRFL 289 >gi|212702186|ref|ZP_03310314.1| hypothetical protein DESPIG_00197 [Desulfovibrio piger ATCC 29098] gi|212674391|gb|EEB34874.1| hypothetical protein DESPIG_00197 [Desulfovibrio piger ATCC 29098] Length = 300 Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 75/239 (31%), Positives = 107/239 (44%), Gaps = 7/239 (2%) Query: 22 VIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELL 81 ++ P V DD + R E + I G R+F+ +S T PRPETELL Sbjct: 60 MLAMPSPVADDAA-GAIRALTARRCAGEPLAHITGRREFFGRDFEVSPQTLIPRPETELL 118 Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 ++ L VR DLGTGTG + + L E P +G+ ++ S AL +A N Sbjct: 119 LE----IVLRECAGHGEVRFADLGTGTGCIGITLALELPHSRGLLLEYSAGALPVAARNI 174 Query: 142 VTNGVSERFDTLQSDWFSS--VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199 + ++R ++ D F+ + G DV+VSNPPYI + D + EV +P +L Sbjct: 175 RSLQAADRLALVRGDMFTPPLLPGGLDVLVSNPPYIAAAEEDEVMAEVLHHEPHSALFSE 234 Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258 DGL H + R L GL +E GY Q V R+ +D G DR Sbjct: 235 QDGLRHLHAVIRAGQRALKPGGLIVMEHGYRQGGAVRRLLAEVGYSEPRTEQDLAGLDR 293 >gi|254415118|ref|ZP_05028880.1| methyltransferase, HemK family [Microcoleus chthonoplastes PCC 7420] gi|196177924|gb|EDX72926.1| methyltransferase, HemK family [Microcoleus chthonoplastes PCC 7420] Length = 309 Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 76/216 (35%), Positives = 101/216 (46%), Gaps = 8/216 (3%) Query: 54 ILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL-AFSLPRIEKRDVVRILDLGTGTGAVC 112 I WR F L +S PRPETE L+D A+ A + D + DLGTG+GA+ Sbjct: 95 ITPWRRF---SLKVSPAVLIPRPETEYLIDLAVSATGQSATPQLDAGQWADLGTGSGAIA 151 Query: 113 LALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS---SVEGLFDVIV 169 L L + VD S AL IA+ NA G R Q W S S++G IV Sbjct: 152 LGLAEAFRSATIHAVDYSHDALAIAQLNAQQLGFESRIQFYQGSWLSPLASLKGQLSGIV 211 Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY 229 SNPPYI + L EVRD +P ++LDGGIDGL R + +L G+ +E+ Sbjct: 212 SNPPYIPRDELQQLQPEVRDHEPLMALDGGIDGLDCIRHLIRTAPDYLRPGGVWIIEMMA 271 Query: 230 NQKVDVVRIFESRKLFL-VNAFKDYGGNDRVLLFCR 264 Q V ++ + + + D G DR L R Sbjct: 272 GQGDTVAQLLHQQGRYCQIQILPDLAGIDRFALAYR 307 >gi|254853929|ref|ZP_05243277.1| modification methylase [Listeria monocytogenes FSL R2-503] gi|300764958|ref|ZP_07074946.1| HemK family modification methylase [Listeria monocytogenes FSL N1-017] gi|258607317|gb|EEW19925.1| modification methylase [Listeria monocytogenes FSL R2-503] gi|300514258|gb|EFK41317.1| HemK family modification methylase [Listeria monocytogenes FSL N1-017] Length = 283 Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 82/247 (33%), Positives = 111/247 (44%), Gaps = 10/247 (4%) Query: 16 GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75 GLS ++ ++ L+ R L E + IL FY ++ D PR Sbjct: 34 GLSRSELWMEISRELEPNHEKQFEEDFARYLAGEPVQYILKTAPFYGYDFLVTEDVLIPR 93 Query: 76 PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135 PETE LV A F ++K V +LD+ TG+G + +AL K P DIS AL Sbjct: 94 PETEELVACAEDF----LKKHPVKNVLDVCTGSGIIAIALKKAFPDISVTASDISAPALA 149 Query: 136 IAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDP 192 +AK NA+ RF D L++ F E FD+IV+NPPYI + V +P Sbjct: 150 VAKKNALLLNADVRFVETDLLEA--FKQNEERFDMIVANPPYISEAEKAEMSDYVLKNEP 207 Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE-SRKLFLVNAFK 251 ++L DGL+ Y D + LN VEIGY Q V ++FE S V K Sbjct: 208 SLALFAENDGLAIYERFVDNLQYVLNSSFWVGVEIGYTQGERVKQLFEKSYPHSTVIIHK 267 Query: 252 DYGGNDR 258 D DR Sbjct: 268 DINSKDR 274 >gi|86142851|ref|ZP_01061290.1| putative protoporphyrinogen oxidase [Leeuwenhoekiella blandensis MED217] gi|85830883|gb|EAQ49341.1| putative protoporphyrinogen oxidase [Leeuwenhoekiella blandensis MED217] Length = 280 Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 74/248 (29%), Positives = 128/248 (51%), Gaps = 12/248 (4%) Query: 17 LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRP 76 L+++++ ++ LD+ QR A+ R ++E + I+ +FY LS PRP Sbjct: 37 LAAYEIPLNFQLELDEAQRNLFDKALSRLQQNEPLQYIVASTEFYGFPFQLSPAVLIPRP 96 Query: 77 ETELLVDSALA-FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135 ETE LVD F K ILD+GTG+GA+ ++L K P K +D+S AL+ Sbjct: 97 ETEELVDWIYTDF------KNTSCTILDIGTGSGAIAVSLAKLLPEAKVTAIDVSEDALK 150 Query: 136 IAKSNAVTNGVSERFDTLQSDWF--SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPR 193 IA++NA +N V+ +F ++ D +++ +DVIVSNPPY+ + + V +++P Sbjct: 151 IAEANASSNAVNVQF--IKQDILDCQALDRSYDVIVSNPPYVRDLEKVEIKANVLNYEPH 208 Query: 194 ISL-DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKD 252 ++L + L Y+ IA+ + L +G+ EI V+ V + ++ V D Sbjct: 209 LALFVEDQNALIFYKKIAELAIQALQPNGILYFEINQYLSVETVGLLKNIGFSQVELRDD 268 Query: 253 YGGNDRVL 260 + G R++ Sbjct: 269 FAGKPRMI 276 >gi|118468920|ref|YP_889201.1| modification methylase, HemK family protein [Mycobacterium smegmatis str. MC2 155] gi|118170207|gb|ABK71103.1| modification methylase, HemK family protein [Mycobacterium smegmatis str. MC2 155] Length = 281 Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 80/221 (36%), Positives = 106/221 (47%), Gaps = 11/221 (4%) Query: 47 KHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGT 106 K + ++G F + L + F PRPETE L++ A+A LPR D V I+DL T Sbjct: 65 KRIPLQHLVGTAAFGPLTLEVGPGVFIPRPETESLLEWAVAQQLPR----DAV-IVDLCT 119 Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEGLF 165 GTGA+ LAL + P + + V+ S ALE A+ NA V D D ++G Sbjct: 120 GTGALALALAQHRPQARVIAVEDSPAALEYARCNAAGTSVEVLAADVTAPDLLPELDGAV 179 Query: 166 DVIVSNPPYI-ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224 D++VSNPPYI E +D EV D DP +L GG DG++ R I +R L G C+ Sbjct: 180 DLVVSNPPYIPEGAELDP---EVADHDPAHALFGGPDGMAVIRPIVALAARWLRDGGKCA 236 Query: 225 VEIGYNQKVDVVRIFESRKLFL-VNAFKDYGGNDRVLLFCR 264 VE V F F V A D G R + R Sbjct: 237 VEHDDTTSARTVEAFTHDGNFTDVTARHDLTGRPRFVTATR 277 >gi|261365336|ref|ZP_05978219.1| protein-(glutamine-N5) methyltransferase [Neisseria mucosa ATCC 25996] gi|288566276|gb|EFC87836.1| protein-(glutamine-N5) methyltransferase [Neisseria mucosa ATCC 25996] Length = 287 Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 79/227 (34%), Positives = 111/227 (48%), Gaps = 15/227 (6%) Query: 44 RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103 R L E I I+G R+FY + D PRPETE LV++ + LP+ R+ D Sbjct: 66 RRLNGEPIAYIIGGREFYGRWFEVCPDVLIPRPETEHLVEAVIEH-LPK-----NGRVWD 119 Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF----- 158 LGTG+GAV + + E + DIS +AL +A+ NA G + F + WF Sbjct: 120 LGTGSGAVAVTVALERKDAEVRASDISRQALVVARRNAENLGAAVEFAS--GSWFDTDKT 177 Query: 159 -SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217 S + FDVIVSNPPYIE+ ++R F+P+ +L DGL+ R +A L Sbjct: 178 SSEDKYRFDVIVSNPPYIEADDSHLNQGDLR-FEPQTALTDFADGLTCIRELAQRAPEFL 236 Query: 218 NKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 + G +E GYNQ V +I + +D G DR+ L R Sbjct: 237 KEGGWLLLEHGYNQGGAVRQILSENGFTEIETRQDLAGLDRLTLGVR 283 >gi|30249864|ref|NP_841934.1| hemK_fam: modification methylase [Nitrosomonas europaea ATCC 19718] gi|30180901|emb|CAD85823.1| hemK_fam: modification methylase [Nitrosomonas europaea ATCC 19718] Length = 289 Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 80/256 (31%), Positives = 123/256 (48%), Gaps = 9/256 (3%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L V + +I + +L Q + R + E + + G R FY++ Sbjct: 35 DARWILQSVLNTDAAFLIAHAEQLLSTDQVAHFRQMLARRIAGEPVAYLTGERGFYDLVF 94 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 ++ D PRPETELLV+ AL+ +I +LDLGTG+GA+ + L + Sbjct: 95 EVTPDVLIPRPETELLVEMALS----KIPSDRKCNVLDLGTGSGAIAITLARHRASTCVT 150 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS-VEGLFDVIVSNPPYIESVIVDCLG 184 VD S A+ +A+ NA + V + +++DWFSS FDVIV+NPPY+ + Sbjct: 151 AVDFSPGAMAVARRNARMHAV-KNVVFIEADWFSSFTSEKFDVIVANPPYVAAGDPHLEE 209 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 ++R F+P +L +GL RTI +L G +E GY+Q DV R ++ Sbjct: 210 GDLR-FEPLTALVAQDNGLDCIRTIIAQAPGYLEPSGWLMLEHGYDQ-ADVCRELLAKAG 267 Query: 245 FL-VNAFKDYGGNDRV 259 F + D G DRV Sbjct: 268 FTHLFTRPDIAGTDRV 283 >gi|229542477|ref|ZP_04431537.1| modification methylase, HemK family [Bacillus coagulans 36D1] gi|229326897|gb|EEN92572.1| modification methylase, HemK family [Bacillus coagulans 36D1] Length = 287 Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 83/253 (32%), Positives = 120/253 (47%), Gaps = 18/253 (7%) Query: 17 LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRP 76 LS+ ++++ PD RQ A K + I G+ FY + ++ D PRP Sbjct: 44 LSNLRMVLPPDVEAKFRQ------AAEAHAKGVPVQHITGYETFYGRKFFVNGDVLIPRP 97 Query: 77 ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136 ETE LV A+ + +++ D+GTG+G + + E P DIS KAL + Sbjct: 98 ETEELVQGAIGRIRRHFGETKGLKLADIGTGSGIIATTIKLELPELLVYASDISEKALAV 157 Query: 137 AKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPR 193 A+ NA RF D LQ F E L D+++SNPPYI L + VRD DP Sbjct: 158 AEKNAEALHADIRFVHGDLLQP--FIHGEKL-DIVLSNPPYIPETDRSSLSVVVRDHDPE 214 Query: 194 ISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF---LVNAF 250 +L GG DGL+ YR + + L+K L EIG Q V + R F +V Sbjct: 215 TALFGGEDGLAFYRRFMETLPSVLSKRALVGFEIGSGQGERVSCLL--RDTFPESVVEVV 272 Query: 251 KDYGGNDRVLLFC 263 +D G++R ++FC Sbjct: 273 RDINGHER-MVFC 284 >gi|330846742|ref|XP_003295164.1| hypothetical protein DICPUDRAFT_44415 [Dictyostelium purpureum] gi|325074183|gb|EGC28309.1| hypothetical protein DICPUDRAFT_44415 [Dictyostelium purpureum] Length = 340 Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 87/270 (32%), Positives = 129/270 (47%), Gaps = 24/270 (8%) Query: 17 LSSHQVIVDPDSVL---DDRQRFFLTNA--------IVRSLKHESIHRILGWRDFYNVRL 65 L SH + +D ++ Q FLTN + R L +E I ++G+R F+ + Sbjct: 66 LISHVLDIDSSAITLFSKKNQHRFLTNEEYSRLQELVNRRLLNEPISYLIGYRYFWKHKF 125 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 T PRP++E +V+ L K D R+LDLGTGTG + L++L E GV Sbjct: 126 HCDRSTLIPRPDSETIVEKILEEKNKNNLKFD--RVLDLGTGTGCLLLSILYELDGSFGV 183 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWF---SSVEGL-----FDVIVSNPPYIES 177 G+D S ++L +A NA + +R L SDW S V+ L FD+++SNPPYI Sbjct: 184 GIDKSKESLLLANKNAKELELKDRVCFLNSDWNHQESLVKELGQFKPFDLVISNPPYISI 243 Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA---DGVSRHLNKDGLCSVEIGYNQKVD 234 L V+D++P +L +GL YR I L+ + EIG Q+ D Sbjct: 244 DEYKELNETVKDWEPTTALIADENGLKDYRNIGLLLKNNKELLSNNAQVVFEIGKGQEND 303 Query: 235 VVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 ++ I ES ++ KD R L+F R Sbjct: 304 IIEIMESCGFKFTDSKKDLSSIIRCLVFTR 333 >gi|329118657|ref|ZP_08247361.1| protein methyltransferase HemK [Neisseria bacilliformis ATCC BAA-1200] gi|327465392|gb|EGF11673.1| protein methyltransferase HemK [Neisseria bacilliformis ATCC BAA-1200] Length = 271 Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 93/256 (36%), Positives = 122/256 (47%), Gaps = 17/256 (6%) Query: 12 CRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDT 71 C TG + Q+I L L+ R L E ILG R+FY R T+S Sbjct: 22 CAATGWTPAQLITRSREPLPPDTAAALSALENRRLAGEPAAYILGEREFYGRRFTVSPAV 81 Query: 72 FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131 PRPETE LV++ALA R+ R+ DLGTG+GA+ + L E P DIS Sbjct: 82 LIPRPETEHLVEAALA----RLSAGG--RVWDLGTGSGAIAVTLACERPDAHVSASDISP 135 Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIESVIVDCLGLEV 187 AL +A NA + + RF WF+++ FD+IVSNPPYIE VD L Sbjct: 136 AALALAAQNAAAHRAAVRFAC--GSWFAALPPSEAADFDLIVSNPPYIE---VDDPHLHQ 190 Query: 188 RD--FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245 D F+P+ +L DGL+ RT+A G + L G VE G NQ IF + Sbjct: 191 GDLRFEPQHALTDFSDGLTCIRTLAHGAAHRLRGGGYLIVEHGCNQGAAARSIFAAAGWQ 250 Query: 246 LVNAFKDYGGNDRVLL 261 ++ D G DR+ L Sbjct: 251 NISTLPDLAGLDRITL 266 >gi|313617101|gb|EFR89653.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Listeria innocua FSL S4-378] Length = 283 Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 81/247 (32%), Positives = 112/247 (45%), Gaps = 10/247 (4%) Query: 16 GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75 GL+ ++ ++ L+ R L E + IL FY ++ D PR Sbjct: 34 GLTRSELWMEMSRELEPNHEKQFQEDFARYLAGEPVQYILKTAPFYGYDFLVTEDVLIPR 93 Query: 76 PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135 PETE LV +A AF +++ + +LD+ TG+G + +AL K P DIS AL Sbjct: 94 PETEELVATAEAF----LKQHPLRSLLDVCTGSGIIAIALKKAFPDMTVTASDISAAALA 149 Query: 136 IAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDP 192 IAK N++ RF D L+S F FD+IV+NPPYI + V +P Sbjct: 150 IAKKNSLLLNADVRFVETDLLES--FKQNNERFDMIVANPPYISEAEKAEMSDYVLKNEP 207 Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE-SRKLFLVNAFK 251 I+L DGL+ Y D + LN VEIGY Q V ++FE S V K Sbjct: 208 SIALFAENDGLAIYERFVDNLKYVLNPSFWVGVEIGYTQGERVKQLFEKSYPHATVLIHK 267 Query: 252 DYGGNDR 258 D DR Sbjct: 268 DINSKDR 274 >gi|229050999|ref|ZP_04194548.1| Protein hemK [Bacillus cereus AH676] gi|228722376|gb|EEL73772.1| Protein hemK [Bacillus cereus AH676] Length = 283 Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 79/265 (29%), Positives = 123/265 (46%), Gaps = 27/265 (10%) Query: 11 LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70 LC V ++ ++++ + + Q T I + ++ I ++G+ FY ++ + Sbjct: 28 LCHVLKVNRTGLLMNMREEITEEQEKSFTEFIHKHVEGIPIQYMIGYEMFYGRSFFVNEE 87 Query: 71 TFEPRPETELLVDSALAFSLPRIEKR---DVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 PRPETE L+ L RIE+ + + + D+GTG+GA+ + L E+ V Sbjct: 88 VLIPRPETEELIVGVLE----RIERHFGDEKLHVADIGTGSGAISITLALENKNLHVYTV 143 Query: 128 DISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184 DI+ +++E+AK NA G F D L F DV+VSNPPYI L Sbjct: 144 DIAQESIEVAKENAKALGAEVTFYHGDLLSP--FHKTGQKLDVVVSNPPYIPEEDWRGLS 201 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 V++ +P+ +L GG DGL YR + + L K + + EIG Q DV R Sbjct: 202 PVVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEIGVGQGEDVKR------- 254 Query: 245 FLVNAFK--------DYGGNDRVLL 261 FL AF D G DR++ Sbjct: 255 FLQQAFPHAHVEVVFDINGKDRMVF 279 >gi|229072795|ref|ZP_04205994.1| Protein hemK [Bacillus cereus F65185] gi|228710286|gb|EEL62261.1| Protein hemK [Bacillus cereus F65185] Length = 283 Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 77/259 (29%), Positives = 127/259 (49%), Gaps = 15/259 (5%) Query: 11 LCRVTGLSSHQVIVDP-DSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69 LC V ++ ++++ + + +D+++ F T I + ++ I ++G+ FY ++ Sbjct: 28 LCHVLKVNRTGLLMNMREEITEDQEKSF-TEFIHKHVEGTPIQYMIGYEMFYGRSFFVNE 86 Query: 70 DTFEPRPETELLVDSALAFSLPRIEKR---DVVRILDLGTGTGAVCLALLKESPFFKGVG 126 + PRPETE L+ L RIE+ + + + D+GTG+GA+ + L E+ Sbjct: 87 EVLIPRPETEELIVGVLE----RIERHFGDEKLHVADIGTGSGAISITLALENENLHVYT 142 Query: 127 VDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183 VDI+ +++E+AK NA G F D L F DV+VSNPPYI L Sbjct: 143 VDIAQESIEVAKENAKALGAEVTFYHGDLLSP--FHKTGQKLDVVVSNPPYIPEEDWRGL 200 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR- 242 V++ +P+ +L GG DGL YR + + L K + + EIG Q DV R+ + Sbjct: 201 SPVVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEIGVGQGEDVKRLLQQAF 260 Query: 243 KLFLVNAFKDYGGNDRVLL 261 V D G DR++ Sbjct: 261 PHAHVEVVFDINGKDRMVF 279 >gi|228924064|ref|ZP_04087340.1| Protein hemK [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228835554|gb|EEM80919.1| Protein hemK [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 283 Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 77/259 (29%), Positives = 128/259 (49%), Gaps = 15/259 (5%) Query: 11 LCRVTGLSSHQVIVDP-DSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69 LC V ++ ++++ + + +D+++ F T I + ++ I ++G+ FY ++ Sbjct: 28 LCHVLKVNRTGLLMNMREEITEDQEKSF-TEFIHKHVEGIPIQYMIGYEMFYGRSFFVNE 86 Query: 70 DTFEPRPETELLVDSALAFSLPRIEKR---DVVRILDLGTGTGAVCLALLKESPFFKGVG 126 + PRPETE L+ L RIE+ + + + D+GTG+GA+ + L E+ Sbjct: 87 EVLIPRPETEELIVGVLE----RIERHFGDEKLHVADIGTGSGAISITLALENENLHVYT 142 Query: 127 VDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183 VDI+ +++E+AK NA G F D L F + DV+VSNPPYI L Sbjct: 143 VDIAQESIEVAKENAKALGAEVTFYHGDLLSP--FHKTDQKLDVVVSNPPYIPEEDWRGL 200 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR- 242 V++ +P+ +L GG DGL YR + + L K + + EIG Q DV R+ + Sbjct: 201 SPVVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEIGVGQGEDVKRLLQQAF 260 Query: 243 KLFLVNAFKDYGGNDRVLL 261 V D G DR++ Sbjct: 261 PHAHVEVVFDINGKDRMVF 279 >gi|16801747|ref|NP_472015.1| hypothetical protein lin2686 [Listeria innocua Clip11262] gi|16415222|emb|CAC97912.1| lin2686 [Listeria innocua Clip11262] Length = 283 Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 81/247 (32%), Positives = 112/247 (45%), Gaps = 10/247 (4%) Query: 16 GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75 GL+ ++ ++ L+ R L E + IL FY ++ D PR Sbjct: 34 GLTRSELWMEMSRELEPNHEKQFQEDFARYLAGEPVQYILKTAPFYGYDFLVTEDVLIPR 93 Query: 76 PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135 PETE LV +A AF +++ + +LD+ TG+G + +AL K P DIS AL Sbjct: 94 PETEELVATAEAF----LKQHPLRSLLDVCTGSGIIAIALKKAFPDMTVTASDISAAALA 149 Query: 136 IAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDP 192 IAK N++ RF D L+S F FD+IV+NPPYI + V +P Sbjct: 150 IAKKNSLLLNADVRFVETDLLES--FKQNNERFDMIVANPPYISEAEKAEMSDYVLKNEP 207 Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE-SRKLFLVNAFK 251 I+L DGL+ Y D + LN VEIGY Q V ++FE S V K Sbjct: 208 SIALFAENDGLAIYERFVDNLKYVLNPSFWVGVEIGYTQGERVKQLFEKSYPHATVLIHK 267 Query: 252 DYGGNDR 258 D DR Sbjct: 268 DINSKDR 274 >gi|82703753|ref|YP_413319.1| HemK family modification methylase [Nitrosospira multiformis ATCC 25196] gi|82411818|gb|ABB75927.1| [protein release factor]-glutamine N5-methyltransferase [Nitrosospira multiformis ATCC 25196] Length = 286 Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 81/229 (35%), Positives = 119/229 (51%), Gaps = 11/229 (4%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVL--DDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63 D+ L V ++ ++ P+ L + Q F+L R E + + G R+FY++ Sbjct: 21 DARMLLQYVLDVNHAYLLAHPEQKLTAEQAQAFYLLTG--RRTLGEPVAYLTGRREFYSL 78 Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 ++ PRPETELL+D ALA RI + RILDLGTG+GA+ L L P K Sbjct: 79 EFNVTPAVLVPRPETELLIDLALA----RIPPQRPCRILDLGTGSGAIALTLATHRPLAK 134 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDC 182 VD+S A+ +A +NA ++ +++DWF V G FD+IVSNPPYI Sbjct: 135 VTAVDVSAAAVAVANANAARFSLNN-VRVIEADWFEGVAGESFDLIVSNPPYIAGDDPHL 193 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231 ++R F+P+I+L +GL R I D HL +G +E GY+Q Sbjct: 194 AQGDLR-FEPQIALVAPSEGLGCIRLIIDSAPAHLAPEGSLLLEHGYDQ 241 >gi|153007051|ref|YP_001381376.1| HemK family modification methylase [Anaeromyxobacter sp. Fw109-5] gi|152030624|gb|ABS28392.1| modification methylase, HemK family [Anaeromyxobacter sp. Fw109-5] Length = 285 Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 80/257 (31%), Positives = 123/257 (47%), Gaps = 11/257 (4%) Query: 7 SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66 + L R ++ +D D L D + + R + E ++G R+FY Sbjct: 28 AEVLLARALSCDRVRLYLDFDKPLGDPELAVYRELVRRRAEGEPTAYLVGKREFYGRDFA 87 Query: 67 LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126 + + PRPETELLV++ALA LPR R+LDL TG+GA+ + + E P + + Sbjct: 88 VDARVLVPRPETELLVEAALA-ELPRGG-----RLLDLCTGSGAIGVTVALERPDARVLA 141 Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCLG 184 D S AL +A+ NA G + D +++V G F+VI SNPPY+ + + L Sbjct: 142 TDASEDALAVARENASRLGAV--VELAHGDLWAAVHGDARFEVIASNPPYVPAGELAGLA 199 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 EVR +P I+LDGG DGL+ R I G L G +E+ ++ R+ Sbjct: 200 PEVRR-EPCIALDGGFDGLAVLRRIVSGAPGRLVPGGALLLEMHERHLDELPRLCLQAGF 258 Query: 245 FLVNAFKDYGGNDRVLL 261 A +D G R+++ Sbjct: 259 ERAEARRDLAGLPRLVV 275 >gi|229917063|ref|YP_002885709.1| modification methylase, HemK family [Exiguobacterium sp. AT1b] gi|229468492|gb|ACQ70264.1| modification methylase, HemK family [Exiguobacterium sp. AT1b] Length = 286 Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 82/237 (34%), Positives = 119/237 (50%), Gaps = 14/237 (5%) Query: 31 DDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSL 90 D+ RF I R L E + ++G FY ++ D PRPETE L+D L L Sbjct: 51 DEAARF--EAGIERLLMGEPVQHVIGHAPFYGRSFEVNRDVLIPRPETEELIDWVLG-QL 107 Query: 91 PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150 ++ ++V D+GTG+GA+ + L E + VDIS +A+E+AK NA G + +F Sbjct: 108 RHVKDDEIV---DVGTGSGAIAITLSLELG-VRVQTVDISREAIEVAKRNAAALGATVQF 163 Query: 151 DTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209 + D + + + V+VSNPPYIE+ + L V ++P ++L GG DGL YR + Sbjct: 164 --YEGDGLAPIADHSIRVLVSNPPYIEA--DELLDETVVGYEPHLALFGGKDGLDMYRQL 219 Query: 210 ADGVSRHLNKDG-LCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDYGGNDRVLLFCR 264 R L D L + EIGYNQ DV + R KD G DR++ R Sbjct: 220 IAESVRVLRADWHLIAFEIGYNQGQDVKSLLSERYPEAETGILKDINGKDRIVYAVR 276 >gi|224500714|ref|ZP_03669063.1| hypothetical protein LmonF1_13996 [Listeria monocytogenes Finland 1988] Length = 283 Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 81/247 (32%), Positives = 111/247 (44%), Gaps = 10/247 (4%) Query: 16 GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75 GLS ++ ++ L+ R L E + IL FY ++ D PR Sbjct: 34 GLSRSELWMEISRELEPNHEKQFEEDFARYLAGEPVQYILKTAPFYGYDFLVTEDVLIPR 93 Query: 76 PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135 PETE LV A F ++K V +LD+ TG+G + +AL K P DIS AL Sbjct: 94 PETEELVACAEDF----LKKHPVKNVLDVCTGSGIIAIALKKAFPEISMTASDISAPALV 149 Query: 136 IAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDP 192 +A+ NA+ RF D L++ F E FD+IV+NPPYI + V +P Sbjct: 150 VARKNALLLNADVRFVETDLLEA--FKQNEERFDMIVANPPYISEAEKAEMSDYVLKNEP 207 Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE-SRKLFLVNAFK 251 ++L DGL+ Y D + LN VEIGY Q V ++FE S V K Sbjct: 208 SLALFAENDGLAIYERFVDNLKYVLNSSFWVGVEIGYTQGERVKQLFEKSYPHTTVVIHK 267 Query: 252 DYGGNDR 258 D DR Sbjct: 268 DINSKDR 274 >gi|186683987|ref|YP_001867183.1| HemK family modification methylase [Nostoc punctiforme PCC 73102] gi|186466439|gb|ACC82240.1| modification methylase, HemK family [Nostoc punctiforme PCC 73102] Length = 296 Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 71/220 (32%), Positives = 109/220 (49%), Gaps = 12/220 (5%) Query: 46 LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLG 105 L + I + WR+F ++ +SS PRPETE L+D ALA + DLG Sbjct: 81 LPVQYIAGVTPWRNF---QIAVSSAVLIPRPETECLIDLALAAA-----SGVSGYWADLG 132 Query: 106 TGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS---VE 162 TG+GA+ + L P VD S +AL IA++NA G ++R Q W+ ++ Sbjct: 133 TGSGAIAIGLADVLPKATIHAVDYSLEALAIAQANARNLGFADRIKFYQGSWWEPLTFLK 192 Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL 222 G F +VSNPPYI + + L EV + +P ++LDGG DGL R + + +L G+ Sbjct: 193 GQFSGMVSNPPYIPTSTLSSLQPEVVNHEPHLALDGGADGLDCIRHLIEISPSYLQPGGV 252 Query: 223 CSVEIGYNQKVDVVRIFESRKLFL-VNAFKDYGGNDRVLL 261 +E+ Q V + +S+ + + D G +R L Sbjct: 253 WLIEMMAGQADAVRELLQSQGSYCKIQIHADLAGIERFAL 292 >gi|332687008|ref|YP_004456782.1| methylase of polypeptide chain release factors [Melissococcus plutonius ATCC 35311] gi|332371017|dbj|BAK21973.1| methylase of polypeptide chain release factors [Melissococcus plutonius ATCC 35311] Length = 279 Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 68/213 (31%), Positives = 111/213 (52%), Gaps = 15/213 (7%) Query: 54 ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113 +LG +FY + ++ T PRPETE LVD L + + I+D+GTGTGA+ + Sbjct: 73 LLGETEFYGLPFLVNEHTLIPRPETEELVDYCL-----KENEAAYSTIVDVGTGTGAIAI 127 Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVS 170 +L P ++ G+DIS +AL +A+ NA ++ D L D + D+I+S Sbjct: 128 SLKHARPQWQVTGIDISKQALIVAQENAKI--LNTTIDFLSGDLLEPLMMNGQKVDMIIS 185 Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230 NPPYI + + V ++P ++L +GL+ Y+ +A+ + L +DG +EIG+ Sbjct: 186 NPPYISKAEKNWMDRSVIKYEPALALFADQNGLAIYQRLAEEAKKVLKEDGKIYLEIGFQ 245 Query: 231 QKVDVVRIFES---RKLFLVNAFKDYGGNDRVL 260 Q V IF+ K ++ KD NDR++ Sbjct: 246 QGKAVQEIFQQAFPTKQIIIK--KDLAKNDRIV 276 >gi|269215989|ref|ZP_06159843.1| protein-(glutamine-N5) methyltransferase [Slackia exigua ATCC 700122] gi|269130248|gb|EEZ61326.1| protein-(glutamine-N5) methyltransferase [Slackia exigua ATCC 700122] Length = 329 Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 80/298 (26%), Positives = 130/298 (43%), Gaps = 40/298 (13%) Query: 7 SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66 + L TGLS ++ D L +R L +A+ R E + I G F + L Sbjct: 30 AQHLLSFATGLSRIELYAHHDRPLSPDERDTLRDAVRRRAAGEPLQYIQGTAPFRFIELE 89 Query: 67 LSSDTFEPRPETELLVDSAL-------AF------------SLPRIEKRDV--------- 98 ++ PRPETE+LVD A A+ SLP E Sbjct: 90 VAPGVLIPRPETEVLVDEAFRELKNLGAYAVRRPGPHAGEPSLPPSEGAAASGSARPGVA 149 Query: 99 ----------VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148 + + D+ TG+G + A+ E P + V DIS A+ +A+ N G+ + Sbjct: 150 AEANGTHAGGLVVADVCTGSGCIACAIASEHPDARVVATDISPDAVALARRNVARLGLGD 209 Query: 149 RFDTLQSDWFS--SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206 R D + D + + + FD+++SNPPY+ + +++ + EV F+P ++LDGG DGL + Sbjct: 210 RVDVREGDLCAPLAADAPFDLVISNPPYVPTAVLNDMPREVSVFEPALALDGGCDGLDAF 269 Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 R + D L+ G+ + E+ + + S L V D G RVL+ + Sbjct: 270 RRLIDEAVPLLSFPGVLACELHEDCLDKAADLARSAGLARVRIASDLAGRSRVLIAAK 327 >gi|229153492|ref|ZP_04281670.1| Protein hemK [Bacillus cereus m1550] gi|228630096|gb|EEK86747.1| Protein hemK [Bacillus cereus m1550] Length = 283 Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 76/258 (29%), Positives = 122/258 (47%), Gaps = 13/258 (5%) Query: 11 LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70 LC V ++ ++++ + + Q T I + ++ I ++G+ FY ++ + Sbjct: 28 LCHVLKVNRTGLLMNMREEITEEQEKSFTEFIHKHVEGIPIQYMIGYEMFYGRSFFVNEE 87 Query: 71 TFEPRPETELLVDSALAFSLPRIEKR---DVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 PRPETE L+ L RIE+ + + + D+GTG+GA+ + L E+ V Sbjct: 88 VLIPRPETEELIVGVLE----RIERHFGDEKLHVADIGTGSGAISITLALENKNLHVYTV 143 Query: 128 DISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184 DI+ +++E+AK NA G F D L F DV+VSNPPYI L Sbjct: 144 DIAQESIEVAKENAKALGAEVTFYHGDLLSP--FHKTGQKLDVVVSNPPYIPEEDWRGLS 201 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-K 243 V++ +P+ +L GG DGL YR + + L K + + EIG Q DV R+ + Sbjct: 202 PVVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEIGVGQGEDVKRLLQQAFP 261 Query: 244 LFLVNAFKDYGGNDRVLL 261 V D G DR++ Sbjct: 262 HAHVEVVFDINGKDRMVF 279 >gi|281356724|ref|ZP_06243215.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Victivallis vadensis ATCC BAA-548] gi|281316851|gb|EFB00874.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Victivallis vadensis ATCC BAA-548] Length = 282 Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 74/217 (34%), Positives = 107/217 (49%), Gaps = 10/217 (4%) Query: 44 RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103 R E + +LG F ++ L ++ PRPETELL + A+ LP + +LD Sbjct: 64 RRANREPLQYLLGVAYFMDLELEVTPAVLIPRPETELLAEYAVK-HLP-----EGGSMLD 117 Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG 163 LGTG+GA+ LA+ E P + VD+S ALE+A+ N V G RF LQSD FS + G Sbjct: 118 LGTGSGAIALAVAAERPDVRITAVDVSSDALEVARRNRVRCGGEVRF--LQSDLFSELPG 175 Query: 164 -LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL 222 FD++ +N PY+ L EVR F+P+++L G A ++ HLN G Sbjct: 176 ERFDLVGANLPYVTQEEYPALEPEVRLFEPQLALTAPDGGFRLIERAARELADHLNPGGR 235 Query: 223 CSVEIGYNQKVDVVRIFESRKLF-LVNAFKDYGGNDR 258 E+ Q + +F F ++ DY DR Sbjct: 236 AIFELSPPQAPRLAELFVKLGGFDEIDVLADYTRRDR 272 >gi|30023359|ref|NP_834990.1| modification methylase, HemK family [Bacillus cereus ATCC 14579] gi|228961592|ref|ZP_04123201.1| Protein hemK [Bacillus thuringiensis serovar pakistani str. T13001] gi|229112742|ref|ZP_04242275.1| Protein hemK [Bacillus cereus Rock1-15] gi|229130578|ref|ZP_04259534.1| Protein hemK [Bacillus cereus BDRD-Cer4] gi|229147869|ref|ZP_04276210.1| Protein hemK [Bacillus cereus BDRD-ST24] gi|296505753|ref|YP_003667453.1| modification methylase, HemK family [Bacillus thuringiensis BMB171] gi|29898920|gb|AAP12191.1| Methyltransferase [Bacillus cereus ATCC 14579] gi|228635519|gb|EEK92008.1| Protein hemK [Bacillus cereus BDRD-ST24] gi|228652917|gb|EEL08799.1| Protein hemK [Bacillus cereus BDRD-Cer4] gi|228670723|gb|EEL26034.1| Protein hemK [Bacillus cereus Rock1-15] gi|228798074|gb|EEM45078.1| Protein hemK [Bacillus thuringiensis serovar pakistani str. T13001] gi|296326805|gb|ADH09733.1| modification methylase, HemK family [Bacillus thuringiensis BMB171] Length = 283 Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 76/258 (29%), Positives = 122/258 (47%), Gaps = 13/258 (5%) Query: 11 LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70 LC V ++ ++++ + + Q T I + ++ I ++G+ FY ++ + Sbjct: 28 LCHVLKVNRTGLLMNMREEITEEQEKSFTEFIHKHVEGIPIQYMIGYEIFYGRSFFVNEE 87 Query: 71 TFEPRPETELLVDSALAFSLPRIEKR---DVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 PRPETE L+ L RIE+ + + + D+GTG+GA+ + L E+ V Sbjct: 88 VLIPRPETEELIVGVLE----RIERHFGDEKLHVADIGTGSGAISITLALENKNLHVYTV 143 Query: 128 DISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184 DI+ +++E+AK NA G F D L F DV+VSNPPYI L Sbjct: 144 DIAQESIEVAKENAKALGAEVTFYHGDLLSP--FHKTGQKLDVVVSNPPYIPEEDWRGLS 201 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-K 243 V++ +P+ +L GG DGL YR + + L K + + EIG Q DV R+ + Sbjct: 202 PVVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEIGVGQGEDVKRLLQQAFP 261 Query: 244 LFLVNAFKDYGGNDRVLL 261 V D G DR++ Sbjct: 262 HAHVEVVFDINGKDRMVF 279 >gi|228911167|ref|ZP_04074973.1| Protein hemK [Bacillus thuringiensis IBL 200] gi|228848530|gb|EEM93378.1| Protein hemK [Bacillus thuringiensis IBL 200] Length = 283 Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 75/258 (29%), Positives = 123/258 (47%), Gaps = 13/258 (5%) Query: 11 LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70 LC V ++ ++++ +++ Q T I + ++ I ++G+ FY ++ + Sbjct: 28 LCHVLKMNRTGLLMNMREEINEEQEASFTEFIHKHVEGIPIQYMIGYEMFYGRSFFVNEE 87 Query: 71 TFEPRPETELLVDSALAFSLPRIEKR---DVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 PRPETE L+ L RIE+ + + D+GTG+GA+ + L E+ V Sbjct: 88 VLIPRPETEELIVGVLE----RIERHFGDKELHVADIGTGSGAISITLALENKNLHVYTV 143 Query: 128 DISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184 DI+ +++E+AK NA + G F D L F DV+VSNPPYI L Sbjct: 144 DIAQESIEVAKENAKSLGAEVTFYHGDLLSP--FDKTGQKLDVVVSNPPYIPEEDWRGLS 201 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-K 243 V++ +P+ +L GG DGL YR + + L + + + EIG Q DV R+ + Sbjct: 202 PVVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQEKAIVAFEIGVGQGEDVKRLLQQAFP 261 Query: 244 LFLVNAFKDYGGNDRVLL 261 V D G DR++ Sbjct: 262 HAHVEVVFDINGKDRMVF 279 >gi|33863927|ref|NP_895487.1| SAM-binding motif-containing protein [Prochlorococcus marinus str. MIT 9313] gi|33635511|emb|CAE21835.1| hemK family protein [Prochlorococcus marinus str. MIT 9313] Length = 306 Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 82/246 (33%), Positives = 122/246 (49%), Gaps = 15/246 (6%) Query: 21 QVIVDPD-SVLDDRQRFFLTNAIVRSLKHE-SIHRILG---WRDFYNVRLTLSSDTFEPR 75 Q+ +DP SVL +R L + L H + ++G WRDF L +S+ PR Sbjct: 45 QLYLDPRRSVLLERSLDQLEMIWKQHLDHHIPLQHLIGYCPWRDF---ELEVSAVALIPR 101 Query: 76 PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135 ETELLVD F+L + ++ R DLGTG+GA+ +AL + P ++G VD S +AL Sbjct: 102 QETELLVD----FALQALVRKPFGRWADLGTGSGALAVALARALPVWRGHAVDCSIEALA 157 Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVIVDCLGLEVRDFDP 192 +AK N + Q W+ + G F +++ NPPYI V++ L VRD +P Sbjct: 158 LAKRNLQRLAPHALWQLHQGSWWEPLRPWWGEFSLVLVNPPYIPEVVMAQLEPVVRDHEP 217 Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKD 252 ++L GG DGL R I G + L G +E ++Q V+ + + L V+ D Sbjct: 218 HLALYGGADGLVATRQIIAGAMQALEPGGWLFLEHHHDQSDAVLALMRQQGLENVDYKSD 277 Query: 253 YGGNDR 258 G R Sbjct: 278 LLGVRR 283 >gi|228949049|ref|ZP_04111321.1| Protein hemK [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228810622|gb|EEM56971.1| Protein hemK [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] Length = 283 Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 80/264 (30%), Positives = 125/264 (47%), Gaps = 25/264 (9%) Query: 11 LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70 LC V + ++++ + Q T I + +K I ++G FY ++ + Sbjct: 28 LCHVLKTNRTGLLMNMREEITAEQETSFTEFIHKHVKGIPIQYMIGHEMFYGRSFFVNEE 87 Query: 71 TFEPRPETELLVDSALAFSLPRIEKR---DVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 PRPETE L+ L RIE+ + + + D+GTG+GA+ + L E+ V Sbjct: 88 VLIPRPETEELIVGVLE----RIERHFGDEKLHVADIGTGSGAISITLALENKNLYVYTV 143 Query: 128 DISCKALEIAKSNAVTNGVSERF--DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185 DI+ +++E+AK NA T G F L S ++ + + L DV+VSNPPYI L Sbjct: 144 DIAQESIEVAKENAKTLGAEVTFYHGDLLSPFYETGQKL-DVVVSNPPYIPEEDWRGLSP 202 Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245 V++++P+ +L GG DGL YR + + L K + + EIG Q DV K Sbjct: 203 VVKEYEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEIGVGQGEDV-------KGL 255 Query: 246 LVNAFK--------DYGGNDRVLL 261 L AF D G DR++ Sbjct: 256 LQQAFPHAHVEVVFDINGKDRMVF 279 >gi|88608405|ref|YP_506028.1| HemK family modification methylase [Neorickettsia sennetsu str. Miyayama] gi|88600574|gb|ABD46042.1| modification methylase, HemK family [Neorickettsia sennetsu str. Miyayama] Length = 289 Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 78/261 (29%), Positives = 135/261 (51%), Gaps = 12/261 (4%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L V L+ Q+I+ + + D Q +++ K S+ I+G ++F+ Sbjct: 36 DAELLLAHVLSLNREQLILYCNEGMTDSQAMDF-EMLLKLRKSHSVAAIVGEKEFWKHSF 94 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEK-RDVVRILDLGTGTGAVCLALLKESPFFKG 124 ++ D PRP+TE ++ + L+ R +K ++I++LGTG+G V +++LKE G Sbjct: 95 AVNKDVLIPRPDTETMLVALLS----RYKKLTQPLKIVELGTGSGCVIISILKEFRNALG 150 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL---FDVIVSNPPYIESVIVD 181 G + S A + N + G+ R + + S++ L DVIVSNPPY+ + Sbjct: 151 FGFEKSRAAFYLTMHNMLKYGLRARLKLYRLGFESAMRVLSCKVDVIVSNPPYVRRGEIP 210 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 L LEV++ +PRI+LDGG +G+ Y +I S+ L G +EIG + + VV Sbjct: 211 YLQLEVQN-EPRIALDGGFNGILPYFSILKLASKILRPGGEIFLEIGSSWRDSVVSANYP 269 Query: 242 RKLFLVNAFKDYGGNDRVLLF 262 K +V ++D G +R+L+ Sbjct: 270 FK--IVERYRDLSGIERILVL 288 >gi|138896953|ref|YP_001127406.1| HemK family modification methylase [Geobacillus thermodenitrificans NG80-2] gi|196249771|ref|ZP_03148467.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Geobacillus sp. G11MC16] gi|134268466|gb|ABO68661.1| Modification methylase, HemK family [Geobacillus thermodenitrificans NG80-2] gi|196210647|gb|EDY05410.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Geobacillus sp. G11MC16] Length = 288 Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 76/226 (33%), Positives = 112/226 (49%), Gaps = 10/226 (4%) Query: 45 SLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRI-EKRDVVRILD 103 ++ H I ++G FY R ++ PRPETE LV L LPR+ E R+ + ++D Sbjct: 65 AVDHVPIQYLIGHEWFYGRRFLVNRHVLIPRPETEELVLGVLE-RLPRLFEGRERIDVVD 123 Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-- 161 +GTG+GA+ + L E+ DIS +AL +A+ NA G R L+ D + Sbjct: 124 VGTGSGAIAVTLALENRTLSVTATDISEEALTVARENAERLGA--RISFLRGDLLQPLIE 181 Query: 162 EG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220 +G DV+VSNPPYI L V+D++P +L GG DGL YR A + L Sbjct: 182 QGQTVDVVVSNPPYIPETDAATLSPVVKDYEPHTALFGGRDGLDFYRRFARDLPLVLGTP 241 Query: 221 GLCSVEIGYNQKVDVVRIFESR--KLFLVNAFKDYGGNDRVLLFCR 264 L + E+G Q V + + + + AF D G DR++ R Sbjct: 242 ALAAFEVGAGQGEAVASLLAAAFPEAEIEVAF-DLNGKDRMVYMTR 286 >gi|313203843|ref|YP_004042500.1| proteiN-(glutamine-n5) methyltransferase, release factor-specific [Paludibacter propionicigenes WB4] gi|312443159|gb|ADQ79515.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Paludibacter propionicigenes WB4] Length = 282 Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 76/257 (29%), Positives = 121/257 (47%), Gaps = 9/257 (3%) Query: 7 SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66 S+ + ++TG S ++IV+ +++ D Q + I + K+ I ILG +F+ + Sbjct: 25 SYLIIEKLTGFSRTEIIVNKNTLFSDEQHHVIETFIEKLKKNVPIQYILGETEFFGLTFN 84 Query: 67 LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126 ++ PRPETE LV+ + + + + ILD+GTG+G + ++L E P Sbjct: 85 VNESVLIPRPETEELVEWIRSEN----NRSADLNILDIGTGSGCIAISLKHEFPNASVHA 140 Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLE 186 DIS +AL A+SN N + F E +D+IVSNPPY+ + Sbjct: 141 FDISEQALNTARSNVERNKLDVTFSRTNILNAPKTEQRWDIIVSNPPYVTEQEKSSILPN 200 Query: 187 VRDFDPRISL---DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 V + +P ++L D D L YR+IA HL G EI + V+ V + Sbjct: 201 VLEHEPHLALFVPDN--DPLLFYRSIALFAKHHLKPQGKLYFEINRSFGVETVELLTDLG 258 Query: 244 LFLVNAFKDYGGNDRVL 260 V KD GNDR++ Sbjct: 259 FCNVELRKDISGNDRMV 275 >gi|91070576|gb|ABE11479.1| putative protein methyltransferase [uncultured Prochlorococcus marinus clone HOT0M-7C8] Length = 289 Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 69/220 (31%), Positives = 104/220 (47%), Gaps = 9/220 (4%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101 + +SL + + I WRD ++L ++ PRPETEL++D + +K + Sbjct: 69 LFKSLPIQYLCGITFWRD---LKLKVTDKVLIPRPETELIIDIVFKIFGKQSQK---LFF 122 Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW---F 158 +LGTG+GA+ +AL P + G+ DIS AL+IA N + W F Sbjct: 123 AELGTGSGAISIALALAYPSWNGIATDISQDALDIATKNYINCSKYTNLKFYCGHWWTPF 182 Query: 159 SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 S +G D+ +SNPPYI + L EV++F+P I+L GG DGL H I L Sbjct: 183 GSFKGKLDLAISNPPYIPKDTYEKLPKEVKNFEPEIALLGGEDGLKHITEIIQKAPLFLK 242 Query: 219 KDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258 + G +E ++Q V ++ K V D G R Sbjct: 243 EKGWLILENHFDQGEKVKQLLIKSKFKSVEIVNDLSGVGR 282 >gi|189499813|ref|YP_001959283.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Chlorobium phaeobacteroides BS1] gi|189495254|gb|ACE03802.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Chlorobium phaeobacteroides BS1] Length = 297 Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 73/221 (33%), Positives = 105/221 (47%), Gaps = 7/221 (3%) Query: 46 LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALA-FSLPRIEKRDVVRILDL 104 LK + I G + FY ++ PRPETELL + AL + ILD+ Sbjct: 72 LKGRPLQYITGEQIFYGYSFSVDERVLIPRPETELLFEYALERWQAGAPAPESGPEILDI 131 Query: 105 GTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD-----WFS 159 GTG+G + + P + VD+S +ALEIA NA +GV+ER +QSD + Sbjct: 132 GTGSGCLAVLFAITVPDARITAVDVSAEALEIAALNAEKHGVTERIRFVQSDALHPGFSE 191 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 + G +D+IVSNPPYI L EV++++P+I+L DG + Y I S L Sbjct: 192 KLAGRYDLIVSNPPYIPESEWSALQKEVKEYEPKIALTIS-DGFAFYHAITRSASALLRA 250 Query: 220 DGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 G+ E+ + V + KDY G DRV+ Sbjct: 251 GGVLCFELHADGASVVSGSMRDGGYEGIAVQKDYAGLDRVI 291 >gi|283782509|ref|YP_003373264.1| modification methylase, HemK family [Pirellula staleyi DSM 6068] gi|283440962|gb|ADB19404.1| modification methylase, HemK family [Pirellula staleyi DSM 6068] Length = 292 Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 73/262 (27%), Positives = 125/262 (47%), Gaps = 5/262 (1%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L G + D V+ D R + + + + ++G R+FY++ L Sbjct: 31 DAEVLLASAQGCERIMLYTMFDQVVADDVRAKFRELVKKRGEGVPVAYLVGKREFYSLPL 90 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 ++SD PRPETEL+V +A+ F + + ++D+GTG+GA+ LA+ K + Sbjct: 91 RVTSDVLIPRPETELVVMTAIDFI--KAKAIAAPAVIDVGTGSGAIALAIAKNMKTAQVT 148 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL--FDVIVSNPPYIESVIVDCL 183 VD+S AL +AK NAV N + R ++S+ + FDVI +N PY+ + L Sbjct: 149 AVDVSPAALAVAKQNAVDNKLEARVTLIESNLLGEIPAATKFDVIAANLPYVSDAEYEEL 208 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 V+ F+P+++L GG G + + + L +E+ VV + ++ Sbjct: 209 PHSVKAFEPKLALVGGTSGSELIEKLLPQAAERMQPGALLLLELSPMLAEKVVALLKADS 268 Query: 244 LFL-VNAFKDYGGNDRVLLFCR 264 F V + KD G+ RV+ R Sbjct: 269 RFEGVESLKDLAGHARVIRATR 290 >gi|152977514|ref|YP_001377031.1| HemK family modification methylase [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152026266|gb|ABS24036.1| modification methylase, HemK family [Bacillus cytotoxicus NVH 391-98] Length = 283 Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 69/235 (29%), Positives = 117/235 (49%), Gaps = 10/235 (4%) Query: 11 LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70 LC V + ++++ + + Q I + + + ++G+ FY ++ + Sbjct: 28 LCHVLNTNRTGLMMNMREEISNEQEKRFKELIHKHIDGMPVQYLMGYEMFYGRSFFVNEE 87 Query: 71 TFEPRPETELLVDSALAFSLPRIEKR---DVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 PRPETE L+ L RI++ + + D+GTG+GA+ + L E+ V Sbjct: 88 VLIPRPETEELIVGVLE----RIQRNFGNQELHVADIGTGSGAISITLALENQNLHVYTV 143 Query: 128 DISCKALEIAKSNAVTNGVSERF--DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185 DI+ +++E+AK NA + G + F L S ++ + + L DV+VSNPPYI L Sbjct: 144 DIAQESIEVAKQNATSLGANVTFYHGDLLSPFYETGKKL-DVVVSNPPYIPEEDWKGLSS 202 Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 V++ +P+ +L GG DGL YR + + R L K L + E+G Q DV + E Sbjct: 203 VVKEHEPKRALVGGADGLDFYRRFMEELPRVLQKKALVAFEVGVGQGEDVKGLLE 257 >gi|312142773|ref|YP_003994219.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Halanaerobium sp. 'sapolanicus'] gi|311903424|gb|ADQ13865.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Halanaerobium sp. 'sapolanicus'] Length = 286 Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 74/259 (28%), Positives = 126/259 (48%), Gaps = 8/259 (3%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ + + + + V D L +++ + + K + I G ++F ++ Sbjct: 25 DAEVLMAELLDMERINLYVKYDYPLKEKEIKNYREMVKKRAKRIPLAYITGKKEFMSLEF 84 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 LS PRP+TE LV+ +++ R + + +I+D+G G+GA+ ++L + V Sbjct: 85 DLSEAVLIPRPDTENLVEEVISYC--RENELEKPQIIDVGCGSGAISVSLGYYLEDARVV 142 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIESVIVD 181 G DIS AL+IA+ N + ER +QSD D++VSNPPYI + Sbjct: 143 GSDISKAALKIARHNLKKFELEERVSVVQSDLLREFIKRDIAEIDIVVSNPPYISEKEMA 202 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 L EV+ +PR +L+ G GL Y+ + + L K+G+ +EIG Q V+ IF+ Sbjct: 203 ELAPEVKK-EPRTALEAGKKGLDFYKKLIPQAEKVLKKEGMLFLEIGSRQAEAVLDIFDE 261 Query: 242 RKLFLVNAFKDYGGNDRVL 260 L KDY +DR++ Sbjct: 262 NWSEL-EIIKDYADHDRIV 279 >gi|317130772|ref|YP_004097054.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacillus cellulosilyticus DSM 2522] gi|315475720|gb|ADU32323.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacillus cellulosilyticus DSM 2522] Length = 290 Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 68/216 (31%), Positives = 108/216 (50%), Gaps = 7/216 (3%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALA-FSLPRIEKRDVVRILDLGTGTG 109 + I+G FY ++S+ PRPETE L+++ L + + +RI+D+GTG+G Sbjct: 72 VQHIIGHEQFYGRDFKVNSNVLIPRPETEELIEALLGKIKSLFLNREQPIRIVDVGTGSG 131 Query: 110 AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFD 166 + + L E VDIS AL++A+SNA G F D L+ S E FD Sbjct: 132 IIAITLALEVVHSHVHAVDISQAALDVARSNATALGAKVTFHEGDLLEPFLAESSE--FD 189 Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE 226 +++SNPPYI + V D +P ++L G DGL+ YR + + L+K GL + E Sbjct: 190 IVISNPPYIPEGDRAIMKENVLDHEPALALFAGQDGLTIYRKLIKQIPFVLHKKGLVAFE 249 Query: 227 IGYNQKVDVVRIFESRKLFL-VNAFKDYGGNDRVLL 261 IG+ Q V + + + D G +R+++ Sbjct: 250 IGHGQGESVKALLAAEYPAADIAVLNDINGKERIVI 285 >gi|257060964|ref|YP_003138852.1| modification methylase, HemK family [Cyanothece sp. PCC 8802] gi|256591130|gb|ACV02017.1| modification methylase, HemK family [Cyanothece sp. PCC 8802] Length = 300 Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 71/214 (33%), Positives = 107/214 (50%), Gaps = 11/214 (5%) Query: 57 WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV--RILDLGTGTGAVCLA 114 WR+F L +S PRPETEL++D A+ ++ + D+ +DLGTG+GA+ Sbjct: 90 WRNF---SLKVSPSVLIPRPETELIIDFAVK-AVKDSPRNDLALGHWVDLGTGSGAIACG 145 Query: 115 LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSN 171 L + P VD S AL IA+ NA G S R + Q W++ +E G ++SN Sbjct: 146 LAQAFPKAIIHAVDSSEAALVIAQENANNLGFSSRINFYQGSWWTPLESLKGKISGVLSN 205 Query: 172 PPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231 PPYI + ++ L EVRD +P ++LDGG DGL R + + +L G+ VE+ Q Sbjct: 206 PPYIPTKMLSELAPEVRDHEPYLALDGGEDGLDSLRYLINSSPDYLYSGGIWLVEMMAGQ 265 Query: 232 KVDVVRIFESRKLFL-VNAFKDYGGNDR-VLLFC 263 V ++ + + D DR L +C Sbjct: 266 GEKVAQLLTDSTAYKDIKILSDLAEIDRFALAYC 299 >gi|218900454|ref|YP_002448865.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacillus cereus G9842] gi|218544940|gb|ACK97334.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacillus cereus G9842] Length = 283 Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 75/258 (29%), Positives = 122/258 (47%), Gaps = 13/258 (5%) Query: 11 LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70 LC V ++ ++++ +++ Q T I + ++ I ++G+ FY ++ + Sbjct: 28 LCHVLKMNRTGLLMNMREEINEEQEASFTEFIHKHVEGIPIQYMIGYEMFYGRSFFVNEE 87 Query: 71 TFEPRPETELLVDSALAFSLPRIEKR---DVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 PRPETE L+ L RIE+ + + D+GTG+GA+ + L E+ V Sbjct: 88 VLIPRPETEELIVGVLE----RIERHFGDKELHVADIGTGSGAISITLALENKNLHVYTV 143 Query: 128 DISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184 DI+ +++E+AK NA G F D L F DV+VSNPPYI L Sbjct: 144 DIAQESIEVAKENAKALGAEVTFYHGDLLSP--FHKTGQKLDVVVSNPPYIPEEDWRGLS 201 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-K 243 V++ +P+ +L GG DGL YR + + L + + + EIG Q DV R+ + Sbjct: 202 PVVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQEKAIVAFEIGVGQGEDVKRLLQQAFP 261 Query: 244 LFLVNAFKDYGGNDRVLL 261 V D G DR++ Sbjct: 262 HAHVEVVFDINGKDRMVF 279 >gi|228968457|ref|ZP_04129446.1| Protein hemK [Bacillus thuringiensis serovar sotto str. T04001] gi|228791237|gb|EEM38850.1| Protein hemK [Bacillus thuringiensis serovar sotto str. T04001] Length = 283 Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 75/258 (29%), Positives = 122/258 (47%), Gaps = 13/258 (5%) Query: 11 LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70 LC V ++ ++++ +++ Q T I + ++ I ++G+ FY ++ + Sbjct: 28 LCHVLKMNRTGLLMNMREEINEEQEASFTEFIHKHVEGIPIQYMIGYEMFYGRSFFVNEE 87 Query: 71 TFEPRPETELLVDSALAFSLPRIEKR---DVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 PRPETE L+ L RIE+ + + D+GTG+GA+ + L E+ V Sbjct: 88 VLIPRPETEELIVGVLE----RIERHFGDKELHVADIGTGSGAISITLALENKNLHVYTV 143 Query: 128 DISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184 DI+ +++E+AK NA G F D L F DV+VSNPPYI L Sbjct: 144 DIAQESIEVAKENAKALGAEVTFYHGDLLSP--FHKAGQKLDVVVSNPPYIPEEDWRGLS 201 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-K 243 V++ +P+ +L GG DGL YR + + L + + + EIG Q DV R+ + Sbjct: 202 PVVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQEKAIVAFEIGVGQGEDVKRLLQQAFP 261 Query: 244 LFLVNAFKDYGGNDRVLL 261 V D G DR++ Sbjct: 262 HAHVEVVFDINGKDRMVF 279 >gi|68171900|ref|ZP_00545223.1| Modification methylase HemK [Ehrlichia chaffeensis str. Sapulpa] gi|88658386|ref|YP_507848.1| HemK family modification methylase [Ehrlichia chaffeensis str. Arkansas] gi|67998675|gb|EAM85404.1| Modification methylase HemK [Ehrlichia chaffeensis str. Sapulpa] gi|88599843|gb|ABD45312.1| modification methylase, HemK family [Ehrlichia chaffeensis str. Arkansas] Length = 280 Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 67/211 (31%), Positives = 106/211 (50%), Gaps = 5/211 (2%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110 I I+G R+F++ ++SD +PRP++E ++ S A P +R ++ D GTG+G Sbjct: 71 ISHIIGKREFWSTDFIVNSDVLDPRPDSETIISSVFAM-YPCKNRRLIIG--DFGTGSGC 127 Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170 + LL G+ ++ S KA +A N +G+ R S W ++ FD+IVS Sbjct: 128 LLSILLLRYRNAVGIAIEKSVKAYRVAYQNFKNHGLYSRIKMRLSSW-NTCYDTFDLIVS 186 Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230 NPPYI + L EV+ +P ++LDGG GL Y I + R L ++G+ +EIG + Sbjct: 187 NPPYIRRSKITTLQPEVKLHEPMVALDGGPIGLEIYSQIFVIIKRCLKQNGVAILEIGED 246 Query: 231 QKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 Q + RI L D G R ++ Sbjct: 247 QH-QIHRIVHRYGLKFCTYHNDLSGKLRCIV 276 >gi|124265715|ref|YP_001019719.1| hemK protein [Methylibium petroleiphilum PM1] gi|124258490|gb|ABM93484.1| hemK protein [Methylibium petroleiphilum PM1] Length = 275 Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 80/254 (31%), Positives = 118/254 (46%), Gaps = 10/254 (3%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L V ++ D LD + + R E + +LG ++F+ +RL Sbjct: 23 DAQCLLSAVLARPRSWLLAHADEALDPQAARHYDALLARRAAGEPLAYVLGEKEFFGLRL 82 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 ++ D PR +TE LV+ AL +E + DLGTG+GA+ LAL P + Sbjct: 83 EVTPDVLIPRADTETLVEWALELLPCNVE----TAVADLGTGSGAIALALAARRPTCRVT 138 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLG 184 VD S AL +A+ N G++ + SDWFS++EG F +IVSNPPYI DC Sbjct: 139 AVDASSDALAVAERNGGRLGLAVEWRL--SDWFSALEGRRFALIVSNPPYIAD--GDC-H 193 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 L+ +P+ +L G DGL+ R I + L G +E GY+Q V + Sbjct: 194 LDALTHEPQRALTSGPDGLAAIRHIVASAASFLTAGGWLLIEHGYDQAEAVQALLGVAGF 253 Query: 245 FLVNAFKDYGGNDR 258 + D GG R Sbjct: 254 EHIATRHDLGGQPR 267 >gi|159902894|ref|YP_001550238.1| putative protein methyltransferase [Prochlorococcus marinus str. MIT 9211] gi|159888070|gb|ABX08284.1| putative protein methyltransferase [Prochlorococcus marinus str. MIT 9211] Length = 293 Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 64/191 (33%), Positives = 101/191 (52%), Gaps = 13/191 (6%) Query: 47 KHESIHRILG---WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103 ++E + ++G WRDF +L ++S F PR ETE+LV+ +L + V R D Sbjct: 76 ENEPLQYLVGKCPWRDF---QLEINSSVFIPRQETEILVE----LALKKCNGISVGRWAD 128 Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE- 162 LGTG+G + +AL + P + G VD S AL +AK N + W+ ++ Sbjct: 129 LGTGSGVLAVALARSLPGWIGDAVDCSKDALSLAKKNLANLANNSHVHFHLGHWWQPLKS 188 Query: 163 --GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220 G +D++++NPPYI S ++ L VRD +P ++L GG+DG++ R I G + L Sbjct: 189 WWGTYDLVLANPPYIPSAVLSELHPIVRDNEPHLALSGGLDGMNCCREIIRGAKKGLGTG 248 Query: 221 GLCSVEIGYNQ 231 G E Y+Q Sbjct: 249 GWLIFEHHYDQ 259 >gi|126653460|ref|ZP_01725556.1| modification methylase, HemK family protein [Bacillus sp. B14905] gi|126589816|gb|EAZ83949.1| modification methylase, HemK family protein [Bacillus sp. B14905] Length = 286 Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 76/280 (27%), Positives = 127/280 (45%), Gaps = 20/280 (7%) Query: 1 MQALRDSHSFLC--------------RVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSL 46 M+AL + SFL + G S +V++ L + Q+ I + Sbjct: 8 MEALEWASSFLVDNGREQTAARIVMQHILGTSYSEVMLHLQDKLTEEQQVKFKALIEEHV 67 Query: 47 KHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGT 106 + +G +FY + PRPETE L+ + + ++ + +++ D+GT Sbjct: 68 NGRPVQYCVGSEEFYGRSFIVDESVLIPRPETEELILGTIN-RMTKLFQHQALKVADIGT 126 Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LF 165 G+GA+ +++ E P V D+S AL A+ NA + D D + + G F Sbjct: 127 GSGAIAISMKLECPALTVVATDLSEDALATAQKNA--QRLEADIDFRLGDLTAPLAGEKF 184 Query: 166 DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225 D+I+SNPPYI + + V +P +L DGL YR +A+ + ++NK L + Sbjct: 185 DIILSNPPYIAFDEAEAMSDVVLKHEPHSALFAEEDGLILYRQLAEQLPMYMNKPALIGL 244 Query: 226 EIGYNQKVDVVRIFE-SRKLFLVNAFKDYGGNDRVLLFCR 264 EIGY Q V + F+ S ++ KD G R ++FC Sbjct: 245 EIGYTQGEKVAKFFQDSFPQATISIEKDINGKPR-MIFCE 283 >gi|319945453|ref|ZP_08019713.1| protein methyltransferase HemK [Lautropia mirabilis ATCC 51599] gi|319741239|gb|EFV93666.1| protein methyltransferase HemK [Lautropia mirabilis ATCC 51599] Length = 297 Score = 103 bits (256), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 71/215 (33%), Positives = 111/215 (51%), Gaps = 6/215 (2%) Query: 49 ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL-AFSLPRIEKRDV-VRILDLGT 106 E + +LG ++FY +S PR +TE LV++AL +L R ++R V + +L+LGT Sbjct: 74 EPLAYLLGQQEFYGRPFAVSPAVLIPRADTETLVETALEQLTLLRQQRRAVPLSLLELGT 133 Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-- 164 G+G + + L E+P + V+ S +AL +A+ NA G ++R W+ ++ Sbjct: 134 GSGIIAITLALEAPDTEVHAVERSPEALAMAQQNAKALG-ADRIHWHAGSWWQALASPRH 192 Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224 FD+IVSNPPYI + ++R F+P +L G DGL R I G HL+ G Sbjct: 193 FDLIVSNPPYIAAGDHHLQQGDLR-FEPPQALAAGPDGLDDLRIIIGGAPAHLSPGGWLL 251 Query: 225 VEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRV 259 +E GY+Q+ V + V +D G RV Sbjct: 252 LEHGYDQEAPVQALLRDAGFAEVFTRRDLAGQPRV 286 >gi|194334390|ref|YP_002016250.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Prosthecochloris aestuarii DSM 271] gi|194312208|gb|ACF46603.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Prosthecochloris aestuarii DSM 271] Length = 297 Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 67/222 (30%), Positives = 108/222 (48%), Gaps = 6/222 (2%) Query: 44 RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103 + L+ + + G + FY + PRPETEL+V+ A+ + + ILD Sbjct: 70 KRLQGWPVQYLTGEQYFYGRVFKVDPRVLIPRPETELVVEHAIERLRGCGGEGSQLSILD 129 Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-- 161 +GTG+G + + + P + +D S +AL++A+ NA + GV R LQ+D + Sbjct: 130 IGTGSGCIAVTAALQLPGARITAIDCSAEALDVARENARSYGVETRIRFLQADMLAPEFL 189 Query: 162 ---EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 E +D+I++NPPYI D L EVR+ +PR++L GL YR +A L Sbjct: 190 EDDEAAYDLIIANPPYIPDSEWDDLQAEVREHEPRVALTTA-SGLECYRAVAARAPSLLC 248 Query: 219 KDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 + G+ E+ V + + + KDYGG DR+L Sbjct: 249 QSGILCFELHAEGAGAVSVLMKENGFGDILLHKDYGGYDRIL 290 >gi|75762681|ref|ZP_00742520.1| Peptide release factor-glutamine N5-methyltransferase [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|228903803|ref|ZP_04067919.1| Protein hemK [Bacillus thuringiensis IBL 4222] gi|228942475|ref|ZP_04105012.1| Protein hemK [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228975407|ref|ZP_04135963.1| Protein hemK [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228982044|ref|ZP_04142337.1| Protein hemK [Bacillus thuringiensis Bt407] gi|74489827|gb|EAO53204.1| Peptide release factor-glutamine N5-methyltransferase [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|228777708|gb|EEM25982.1| Protein hemK [Bacillus thuringiensis Bt407] gi|228784389|gb|EEM32412.1| Protein hemK [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228817217|gb|EEM63305.1| Protein hemK [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228855830|gb|EEN00374.1| Protein hemK [Bacillus thuringiensis IBL 4222] gi|326943126|gb|AEA19022.1| modification methylase, HemK family [Bacillus thuringiensis serovar chinensis CT-43] Length = 283 Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 75/258 (29%), Positives = 122/258 (47%), Gaps = 13/258 (5%) Query: 11 LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70 LC V ++ ++++ +++ Q T I + ++ I ++G+ FY ++ + Sbjct: 28 LCHVLKMNRTGLLMNMREEINEEQEASFTEFIHKHVEGIPIQYMIGYEMFYGRSFFVNEE 87 Query: 71 TFEPRPETELLVDSALAFSLPRIEKR---DVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 PRPETE L+ L RIE+ + + D+GTG+GA+ + L E+ V Sbjct: 88 VLIPRPETEELIVGVLE----RIERHFGDKELHVADIGTGSGAISITLALENKNLHVYTV 143 Query: 128 DISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184 DI+ +++E+AK NA G F D L F DV+VSNPPYI L Sbjct: 144 DIAQESIEVAKENAKALGAEVTFYHGDLLSP--FDKTGQKLDVVVSNPPYIPEEDWRGLS 201 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-K 243 V++ +P+ +L GG DGL YR + + L + + + EIG Q DV R+ + Sbjct: 202 PVVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQEKAIVAFEIGVGQGEDVKRLLQQAFP 261 Query: 244 LFLVNAFKDYGGNDRVLL 261 V D G DR++ Sbjct: 262 HAHVEVVFDINGKDRMVF 279 >gi|58583267|ref|YP_202283.1| protoporphyrinogen oxidase [Xanthomonas oryzae pv. oryzae KACC10331] gi|84625103|ref|YP_452475.1| protoporphyrinogen oxidase [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188575429|ref|YP_001912358.1| protein methyltransferase HemK (Protein-glutamine N-methyltransferase hemK) (Protein-(glutamine-N5) MTase hemK) [Xanthomonas oryzae pv. oryzae PXO99A] gi|58427861|gb|AAW76898.1| protoporphyrinogen oxidase [Xanthomonas oryzae pv. oryzae KACC10331] gi|84369043|dbj|BAE70201.1| protoporphyrinogen oxidase [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188519881|gb|ACD57826.1| protein methyltransferase HemK (Protein-glutamine N-methyltransferase hemK) (Protein-(glutamine-N5) MTase hemK) [Xanthomonas oryzae pv. oryzae PXO99A] Length = 281 Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 74/222 (33%), Positives = 110/222 (49%), Gaps = 9/222 (4%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101 + R E + + G R F+ + L +S T PR +TELLV+ +L R++ R Sbjct: 61 VQRREAGEPVAYLTGSRGFWTLDLAVSPATLIPRADTELLVE----LALERLDTSPGRRA 116 Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 DLGTG+GA+ LA+ E P + + D S AL +A+ NA + + D +WF+ + Sbjct: 117 ADLGTGSGAIALAIASERPQSQLIATDASAAALGMARRNADRHSLPN-VDFRLGNWFAPL 175 Query: 162 EG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220 G FD+I SNPPYI + ++R ++P +L G DGL R I HL Sbjct: 176 AGEAFDLIASNPPYIAAHDPHLQQGDLR-YEPASALASGNDGLDDIRLIVADAPAHLLPG 234 Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNA-FKDYGGNDRVLL 261 G +E G++Q D VR + F A ++D DRV L Sbjct: 235 GWLLLEHGWDQG-DAVRALLAASGFDAAATYQDLEARDRVTL 275 >gi|116493077|ref|YP_804812.1| methylase of polypeptide chain release factor [Pediococcus pentosaceus ATCC 25745] gi|116103227|gb|ABJ68370.1| Methylase of polypeptide chain release factor [Pediococcus pentosaceus ATCC 25745] Length = 283 Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 74/227 (32%), Positives = 112/227 (49%), Gaps = 11/227 (4%) Query: 38 LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97 A+ R K E + + F+ + PR ETE LV++ L+ + R Sbjct: 59 FQTAVKRVAKGEPVQYVTNKATFFGREFYVDKRVLIPRVETEELVETILSKTK---RSRQ 115 Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG--VSERFDTLQS 155 +R+LD+GTG+G + + L E P + VDIS AL +A+ NA ++ V R +L Sbjct: 116 RLRVLDIGTGSGDIAITLKLERPEWLVTAVDISKDALTVAQRNAESHEAIVDFRLGSL-- 173 Query: 156 DWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214 F V+G FD+I+SNPPYI + V DF+P +L GL Y+ IAD + Sbjct: 174 --FEPVQGERFDLIISNPPYIADNEKHEMDQSVIDFEPHQALFADDHGLFWYKRIADQLD 231 Query: 215 RHLNKDGLCSVEIGYNQKVDVVRIF-ESRKLFLVNAFKDYGGNDRVL 260 ++L + G EIGY Q D+ + F E + + KD +DR+L Sbjct: 232 QYLVEHGELGCEIGYRQGTDLKKYFLEKKYIDQAEVIKDLSQHDRIL 278 >gi|188589649|ref|YP_001919882.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Clostridium botulinum E3 str. Alaska E43] gi|188499930|gb|ACD53066.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Clostridium botulinum E3 str. Alaska E43] Length = 288 Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 74/263 (28%), Positives = 125/263 (47%), Gaps = 15/263 (5%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L +V +I + +D I + + + IL +F N+ Sbjct: 29 DAELLLGKVLNKEKIYLITHREEKIDKVNEEKYMKLISKRKEKMPVKYILNECEFMNMNF 88 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 + PR +TE+LV+ L I++ D +I DL G+GA+ ++L + K + Sbjct: 89 YVEPGVLIPRADTEILVEEVLK----NIDENDSKKICDLCCGSGAIGISL---ANLRKNI 141 Query: 126 GVDISCKALEIAKSNAVTN----GVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESV 178 VD+ EI + + N + +R + ++SD + +D+IVSNPPYIE Sbjct: 142 NVDL-IDYYEIPEKVTLINIKKYDILDRTNFIKSDLLNKSINDAKKYDIIVSNPPYIEEC 200 Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238 ++ L +V++++P +L GG DGL Y+ I + LN+ G+ + EIGYNQ V + Sbjct: 201 EINDLMDDVKNYEPHTALSGGRDGLDFYKRITEQSINVLNESGILAFEIGYNQGTAVKEL 260 Query: 239 FESRKLFLVNAFKDYGGNDRVLL 261 E + V KD G DRV++ Sbjct: 261 MEEKNFIEVKIVKDLAGLDRVVI 283 >gi|163788596|ref|ZP_02183041.1| putative protoporphyrinogen oxidase [Flavobacteriales bacterium ALC-1] gi|159875833|gb|EDP69892.1| putative protoporphyrinogen oxidase [Flavobacteriales bacterium ALC-1] Length = 492 Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 87/275 (31%), Positives = 134/275 (48%), Gaps = 26/275 (9%) Query: 6 DSHSFLC--RVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63 DS FLC L Q+ ++P+ L+ + + + + I ILG +FY + Sbjct: 24 DSFFFLCTEHYLNLPRFQLSLEPEFTLNKSETGIFFKVLEDLNQQKPIQYILGETEFYGL 83 Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 ++ + PRPETE LVD + + + E+ + RILD+GTG+G + ++L K P + Sbjct: 84 PFKVNENVLIPRPETEELVDLIIKYHSEQSEESQL-RILDIGTGSGCIAISLAKNLPSAE 142 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERF---DTLQ--SDWF-------SSVEGLFDVIVSN 171 +D+S AL+IAK NA N VS F D L+ +D F +FD+IVSN Sbjct: 143 VYALDVSEDALKIAKQNADLNNVSINFIETDILKISNDSFFWKDITLQQKRLVFDIIVSN 202 Query: 172 PPYIESVIVDCLGLEVRDFDPRISLDGGIDG-LSHYRTIADGVSRHLNKDGLCSVEI--- 227 PPY+ ++ + V D +P ++L D L Y+ I + +L G EI Sbjct: 203 PPYVRNLEKQEIKPNVLDNEPHLALFVEDDNPLLFYKEITNFAIDNLKPKGELYFEINQY 262 Query: 228 -GYNQKVDVVRI-FESRKLFLVNAFKDYGGNDRVL 260 G+ K +V FE+ +L KD GNDR+L Sbjct: 263 LGHETKALLVNANFENMEL-----LKDLNGNDRML 292 >gi|193213221|ref|YP_001999174.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Chlorobaculum parvum NCIB 8327] gi|193086698|gb|ACF11974.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Chlorobaculum parvum NCIB 8327] Length = 294 Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 68/221 (30%), Positives = 108/221 (48%), Gaps = 8/221 (3%) Query: 46 LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALA-FSLPRIEKRDVVRILDL 104 L+ + I G FY R + PRPETEL+++ A+ + ++ D ILD+ Sbjct: 71 LQGRPVQYIAGESFFYGYRFFVDERVLIPRPETELVLEHAIERLAASGLDSVDTPSILDI 130 Query: 105 GTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD-----WFS 159 GTG+G + + L P + +D+S ALE+A+ NA +GVS+R +Q+D + Sbjct: 131 GTGSGCIAITLALRLPGAQVTALDVSADALEVARRNAEEHGVSDRIRFVQADALDLAFAQ 190 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 G FD+++SNPPYI L EV+ ++PR++L G YR+I L K Sbjct: 191 KAGGPFDLVISNPPYIPESEWATLQKEVKGYEPRLALVSPT-GFEFYRSIVATAPALLRK 249 Query: 220 DGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 G+ E+ + + V+ + V +DY DR L Sbjct: 250 GGVLCFEL-HADGAEGVKKLLGHEFRDVQVMQDYSRLDRAL 289 >gi|319956158|ref|YP_004167421.1| protein-(glutamine-n5) methyltransferase, release factor-specific [Nitratifractor salsuginis DSM 16511] gi|319418562|gb|ADV45672.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Nitratifractor salsuginis DSM 16511] Length = 270 Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 82/257 (31%), Positives = 119/257 (46%), Gaps = 19/257 (7%) Query: 7 SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66 +H C T L ++ L + FF I R HE I I FY+ Sbjct: 30 AHHLGCERTSL-----LLREGETLPREEEFFAL--IERRKAHEPIEYITNEVSFYSETFY 82 Query: 67 LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126 ++S PRPETELLV+ I ++ + RI ++G G+GA+ + L + P K V Sbjct: 83 IASGALIPRPETELLVEEVAHL----IREKGLKRIAEIGVGSGALSVTLARIFPELKIVA 138 Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLE 186 DIS +AL IA NA GV +R + QS VE + ++IVSNPPYI + L Sbjct: 139 TDISPEALSIAGVNAERFGVKDRIELRQSSLLDGVEAV-EMIVSNPPYIPAGTE--LEPN 195 Query: 187 VRDFDPRISLDGGIDGLSHYRTIA-DGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245 V D++P +L DG R I G R + + E+GY+Q+ + F+ + + Sbjct: 196 VADYEPETALYAPGDGTDLLRQIVLLGQERGIP----IACEMGYDQRAAMEGFFKEQGIE 251 Query: 246 LVNAFKDYGGNDRVLLF 262 +KD G DR L Sbjct: 252 HYRFYKDLAGLDRGFLI 268 >gi|221195021|ref|ZP_03568077.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Atopobium rimae ATCC 49626] gi|221184924|gb|EEE17315.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Atopobium rimae ATCC 49626] Length = 304 Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 69/229 (30%), Positives = 114/229 (49%), Gaps = 11/229 (4%) Query: 10 FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69 L TGLS ++ + D L + + A+ + + + G F ++ L Sbjct: 34 LLSATTGLSRVELYTNFDKPLMQDELNRMHQAVEQRASGRPLQYVTGEMPFRHIVLKCEP 93 Query: 70 DTFEPRPETELLVDSAL------AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 PRPETE+LVD AL + + + +R+L++G GTG + L++ E P Sbjct: 94 GVLIPRPETEVLVDIALEGIDQKCAAGEKDGTPEPLRVLEVGVGTGCIALSIASERPDTD 153 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG----LFDVIVSNPPYIESVI 179 V D+S +A+ +A+ N G+S+R ++ D S V F V+VSNPPYI + I Sbjct: 154 VVATDVSPEAISLAQRNCDALGLSDRVHLIECDLVSGVPKEDVERFCVLVSNPPYIPTEI 213 Query: 180 V-DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227 + + EV++F+P+++LDGG DGL YR + L G+ +E+ Sbjct: 214 LKKSVPAEVKEFEPKLALDGGNDGLDVYRRLLQEAPHMLAPGGMLCIEL 262 >gi|228955576|ref|ZP_04117578.1| Protein hemK [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|229181576|ref|ZP_04308902.1| Protein hemK [Bacillus cereus 172560W] gi|229193580|ref|ZP_04320524.1| Protein hemK [Bacillus cereus ATCC 10876] gi|228589885|gb|EEK47760.1| Protein hemK [Bacillus cereus ATCC 10876] gi|228601944|gb|EEK59439.1| Protein hemK [Bacillus cereus 172560W] gi|228804104|gb|EEM50721.1| Protein hemK [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 283 Score = 102 bits (255), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 77/259 (29%), Positives = 127/259 (49%), Gaps = 15/259 (5%) Query: 11 LCRVTGLSSHQVIVDP-DSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69 LC V ++ ++++ + + +D+++ F T I + ++ I ++G+ FY ++ Sbjct: 28 LCHVLKVNRTGLLMNMREEITEDQEKSF-TEFIHKHVEGIPIQYMIGYEMFYGRSFFVNE 86 Query: 70 DTFEPRPETELLVDSALAFSLPRIEKR---DVVRILDLGTGTGAVCLALLKESPFFKGVG 126 + PRPETE L+ L RIE+ + + + D+GTG+GA+ + L E+ Sbjct: 87 EVLIPRPETEELIVGVLE----RIERHFGDEKLHVADIGTGSGAISITLALENENLHVYT 142 Query: 127 VDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183 VDI+ +++E+AK NA G F D L F DV+VSNPPYI L Sbjct: 143 VDIAQESIEVAKENAKALGAEVTFYHGDLLSP--FHKTGQKLDVVVSNPPYIPEEDWRGL 200 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR- 242 V++ +P+ +L GG DGL YR + + L K + + EIG Q DV R+ + Sbjct: 201 SPVVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEIGVGQGEDVKRLLQQAF 260 Query: 243 KLFLVNAFKDYGGNDRVLL 261 V D G DR++ Sbjct: 261 PHAHVEVVFDINGKDRMVF 279 >gi|229064979|ref|ZP_04200277.1| Protein hemK [Bacillus cereus AH603] gi|228716280|gb|EEL67992.1| Protein hemK [Bacillus cereus AH603] Length = 283 Score = 102 bits (255), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 77/257 (29%), Positives = 123/257 (47%), Gaps = 11/257 (4%) Query: 11 LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70 LC V + ++++ + Q I + ++ I +LG+ FY ++ + Sbjct: 28 LCHVLKTNRTGMLMNMREEITAEQEKSFAQFIHKHVEGIPIQYMLGYEMFYGRSFFVNEE 87 Query: 71 TFEPRPETELLVDSALAFSLPRIEKR---DVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 PRPETE L+ L RIE+ + + I D+GTG+GA+ + L E+ V Sbjct: 88 VLIPRPETEELIVGVLE----RIERHFGNEELHIADIGTGSGAISITLALENKNLHVYTV 143 Query: 128 DISCKALEIAKSNAVTNGVSERF--DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185 DI+ +++E+AK NA T G F L S ++ + + L DV+VSNPPYI L Sbjct: 144 DIAQESIEVAKENAKTLGADVTFYHGDLLSPFYETGQKL-DVVVSNPPYIPEEDWRGLST 202 Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KL 244 V++ +P+ +L GG DGL YR + + L K + + EIG Q DV + + Sbjct: 203 VVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEIGVGQGEDVKALLQQTFPR 262 Query: 245 FLVNAFKDYGGNDRVLL 261 V D G DR++ Sbjct: 263 AQVEVVFDINGKDRMVF 279 >gi|167838057|ref|ZP_02464916.1| hemK protein [Burkholderia thailandensis MSMB43] Length = 251 Score = 102 bits (255), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 80/249 (32%), Positives = 123/249 (49%), Gaps = 19/249 (7%) Query: 21 QVIVDPDSVLDDR--QRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPET 78 Q+I D LD +R+ A R E I ++ G R+F+ + ++ D PRPET Sbjct: 5 QLITRADEPLDAAAIERYLALEA--RRAAGEPIAQLTGAREFFGLEFDVTPDVLIPRPET 62 Query: 79 ELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAK 138 ELLV++AL I+ +LDLGTG+GA+ +++ P + +D S AL++A+ Sbjct: 63 ELLVETALDA----IDGIASPCVLDLGTGSGAIAVSIASGRPDARVWALDRSATALDVAR 118 Query: 139 SNA------VTNGVSERFDTLQSDWFSSVE-GL-FDVIVSNPPYIESVIVDCLGLEVRDF 190 NA G RF L+SDW+++++ GL F V+VSNPPYI ++R F Sbjct: 119 RNARKLLDPARPGGPLRF--LESDWYAALDPGLRFHVVVSNPPYIARHDPHLAEGDLR-F 175 Query: 191 DPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAF 250 +PR +L DGL+ R I G + G +E GY+Q V + + V + Sbjct: 176 EPRGALTDERDGLAAIRAIVAGAHAFVAPGGALWIEHGYDQAAAVRALLGAAGFADVESL 235 Query: 251 KDYGGNDRV 259 D +R Sbjct: 236 ADLASIERA 244 >gi|254448386|ref|ZP_05061847.1| protein-(glutamine-N5) methyltransferase, release factor-specific [gamma proteobacterium HTCC5015] gi|198261999|gb|EDY86283.1| protein-(glutamine-N5) methyltransferase, release factor-specific [gamma proteobacterium HTCC5015] Length = 275 Score = 102 bits (254), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 75/257 (29%), Positives = 119/257 (46%), Gaps = 7/257 (2%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A D+ LC T S +I + L+ Q + + + R E I +LG ++F++ Sbjct: 19 AALDAQLLLCHATNKSRSFLIAHGEEALNAEQAQYFESLVKRRADGEPIAYLLGQQEFWS 78 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + ++ T PR +TE L++ +L P + I DLG G+G + L L P Sbjct: 79 LPFEVNPHTLIPRADTESLIEHSLQLFGPD----STIDIADLGAGSGCIGLTLAHCLPKA 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVD 181 + V+ S AL + + N ++ ++S+W + E FD+I+SNPPY+ Sbjct: 135 NVLCVERSRDALAMIEKNRQQLNINNA-KAIESNWCQDLGEQHFDLIISNPPYVRENDEH 193 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P +L G DGL R +A V +HL G VE GY+Q V RI + Sbjct: 194 LDQGDVR-FEPITALTAGADGLDDIRQLATQVPKHLKPQGHFIVEFGYDQSEAVKRILSA 252 Query: 242 RKLFLVNAFKDYGGNDR 258 + D GG+ R Sbjct: 253 AGFQSLTDITDLGGHIR 269 >gi|28210062|ref|NP_781006.1| methyltransferase [Clostridium tetani E88] gi|28202497|gb|AAO34943.1| methyltransferase [Clostridium tetani E88] Length = 292 Score = 102 bits (254), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 68/219 (31%), Positives = 112/219 (51%), Gaps = 17/219 (7%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110 I ILG +F + + PRP+TE+LV+ ++ I K I D+ G+G Sbjct: 76 IKYILGICEFMGLSFKIREGVLIPRPDTEILVEKSIEI----IRKNHYKNISDVCCGSGI 131 Query: 111 VCLALLKESPFFKGVGV---DISCKALEIAKSNAVTNGVSERFDTLQSDWF-----SSVE 162 + +++ + F V V D+ L++ + N N + + +S+ +S++ Sbjct: 132 IGISI---ATFVDKVNVECFDVEEIPLKVTEENIKLNRLEGKVKVFKSNLLEYAIKNSIK 188 Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL 222 +D+IVSNPPYI+ + L +V++++P I+LDGG DGL Y+ I LN G Sbjct: 189 --YDMIVSNPPYIKKREITNLMEDVKNYEPHIALDGGEDGLYFYKNIVKQSKHLLNSGGT 246 Query: 223 CSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 + EIGY+QK +V I ES + +KD G DRV++ Sbjct: 247 IAFEIGYDQKEEVSCILESNGFVNIECYKDLAGLDRVVI 285 >gi|158337450|ref|YP_001518625.1| protoporphyrinogen IX oxidase [Acaryochloris marina MBIC11017] gi|158307691|gb|ABW29308.1| protoporphyrinogen IX oxidase [Acaryochloris marina MBIC11017] Length = 312 Score = 102 bits (254), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 67/184 (36%), Positives = 96/184 (52%), Gaps = 10/184 (5%) Query: 57 WRDFYNVRLTLSSDTFEPRPETELLVDSAL--AFSLPRIEKRDVVRILDLGTGTGAVCLA 114 WR F+ L +S D PRPETELL+D + A + R++ ++ DLGTG+GA+ L Sbjct: 103 WRQFH---LQVSKDVLIPRPETELLIDLVVDAAQNSARLDHLNLWA--DLGTGSGAIALG 157 Query: 115 LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSN 171 L P VD S +AL +A+ N+ T G+ + WF + EG F IVSN Sbjct: 158 LATAFPQGTVHTVDCSREALAVAQRNSQTYGLDPQIHFHWGQWFGPLVGLEGQFSGIVSN 217 Query: 172 PPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231 PPYI + I+ L EV + +P ++LDGG DGL + I ++L G +E+ Q Sbjct: 218 PPYIPTEILPTLQPEVFEHEPHLALDGGEDGLDAIQEIVAIAPQYLQPGGFLLLEMMCGQ 277 Query: 232 KVDV 235 V Sbjct: 278 DAAV 281 >gi|251780834|ref|ZP_04823754.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243085149|gb|EES51039.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 287 Score = 102 bits (254), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 69/218 (31%), Positives = 112/218 (51%), Gaps = 15/218 (6%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110 + IL +F N+ + PR +TE+LV+ L I++ D +I DL G+GA Sbjct: 73 VKYILNECEFMNMNFYVEPGVLIPRADTEILVEEVLE----NIDENDSKKICDLCCGSGA 128 Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTN----GVSERFDTLQSDWFSSV---EG 163 + ++L + K + VD+ EI + + N V +R + ++SD + Sbjct: 129 IGISL---ANLRKNINVDL-IDYYEIPEKVTLINIKKYDVLDRTNFIKSDLLNKSINDAK 184 Query: 164 LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223 +D+IVSNPPYIE ++ L +V++++P +L GG DGL Y+ I + LN+ G+ Sbjct: 185 KYDIIVSNPPYIEECEINDLMDDVKNYEPHTALSGGRDGLDFYKRITEQSINVLNESGIL 244 Query: 224 SVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 + EIGYNQ V + E + V KD G DRV++ Sbjct: 245 AFEIGYNQGTAVKELMEDKNFIEVKIVKDLAGLDRVVI 282 >gi|229082543|ref|ZP_04215006.1| Protein hemK [Bacillus cereus Rock4-2] gi|228700975|gb|EEL53498.1| Protein hemK [Bacillus cereus Rock4-2] Length = 283 Score = 102 bits (254), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 77/259 (29%), Positives = 127/259 (49%), Gaps = 15/259 (5%) Query: 11 LCRVTGLSSHQVIVDP-DSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69 LC V ++ ++++ + + +D+++ F T I + ++ I ++G+ FY ++ Sbjct: 28 LCHVLKVNRTGLLMNMREEITEDQEKSF-TEFIHKHVEGIPIQYMIGYEMFYGRSFFVNE 86 Query: 70 DTFEPRPETELLVDSALAFSLPRIEKR---DVVRILDLGTGTGAVCLALLKESPFFKGVG 126 + PRPETE L+ L RIE+ + + + D+GTG+GA+ + L E+ Sbjct: 87 EVLIPRPETEELIVGVLE----RIERHFGDEKLHVADIGTGSGAISITLALENENLHVYT 142 Query: 127 VDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183 VDI+ +++E+AK NA G F D L F DV+VSNPPYI L Sbjct: 143 VDIAQESIEVAKENAKALGAEVTFYHGDLLSP--FHKTGQKLDVVVSNPPYIPEEDWRGL 200 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR- 242 V++ +P+ +L GG DGL YR + + L K + + EIG Q DV R+ + Sbjct: 201 SPVVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEIGVGQGGDVKRLLQQAF 260 Query: 243 KLFLVNAFKDYGGNDRVLL 261 V D G DR++ Sbjct: 261 PHAHVEVVFDINGKDRMVF 279 >gi|167817594|ref|ZP_02449274.1| protein methyltransferase HemK [Burkholderia pseudomallei 91] Length = 224 Score = 102 bits (254), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 74/224 (33%), Positives = 116/224 (51%), Gaps = 15/224 (6%) Query: 44 RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103 R E I ++ G R+F+ + ++ D PRPETELLV++AL I+ +LD Sbjct: 1 RRAAGEPIAQLTGAREFFGLEFDITPDVLIPRPETELLVETALDA----IDGIASPCVLD 56 Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA------VTNGVSERFDTLQSDW 157 LGTG+GA+ +++ E P + ++ S AL++A+ NA G RF L+SDW Sbjct: 57 LGTGSGAIAVSIASERPDARVWALERSVAALDVARRNARKLLDPARAGGPLRF--LESDW 114 Query: 158 FSSVE-GL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215 +++++ GL F V+VSNPPYI ++R F+PR +L DGL+ RTI G Sbjct: 115 YAALDPGLRFHVVVSNPPYIARHDPHLAEGDLR-FEPRGALTDENDGLAAIRTIVAGAHA 173 Query: 216 HLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRV 259 + G +E GY+Q V + ++ V + D +R Sbjct: 174 FVAPGGALWLEHGYDQAAAVRTLLDAAGFADVESRADLASIERA 217 >gi|206970195|ref|ZP_03231148.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacillus cereus AH1134] gi|206734772|gb|EDZ51941.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacillus cereus AH1134] Length = 283 Score = 102 bits (253), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 77/259 (29%), Positives = 127/259 (49%), Gaps = 15/259 (5%) Query: 11 LCRVTGLSSHQVIVDP-DSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69 LC V ++ ++++ + + +D+++ F T I + ++ I ++G+ FY ++ Sbjct: 28 LCHVLKVNRTGLLMNMREEITEDQEKSF-TEFIHKYVEGIPIQYMIGYEMFYGRSFFVNE 86 Query: 70 DTFEPRPETELLVDSALAFSLPRIEKR---DVVRILDLGTGTGAVCLALLKESPFFKGVG 126 + PRPETE L+ L RIE+ + + + D+GTG+GA+ + L E+ Sbjct: 87 EVLIPRPETEELIVGVLE----RIERHFGDEKLHVADIGTGSGAISITLALENENLHVYT 142 Query: 127 VDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183 VDI+ +++E+AK NA G F D L F DV+VSNPPYI L Sbjct: 143 VDIAQESIEVAKENAKALGAEVTFYHGDLLSP--FHKTGQKLDVVVSNPPYIPEEDWRGL 200 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR- 242 V++ +P+ +L GG DGL YR + + L K + + EIG Q DV R+ + Sbjct: 201 SPVVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEIGVGQGEDVKRLLQQAF 260 Query: 243 KLFLVNAFKDYGGNDRVLL 261 V D G DR++ Sbjct: 261 PHAHVEVVFDINGKDRMVF 279 >gi|319947034|ref|ZP_08021268.1| protein-(glutamine-N5) methyltransferase [Streptococcus australis ATCC 700641] gi|319747082|gb|EFV99341.1| protein-(glutamine-N5) methyltransferase [Streptococcus australis ATCC 700641] Length = 278 Score = 102 bits (253), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 78/228 (34%), Positives = 113/228 (49%), Gaps = 13/228 (5%) Query: 38 LTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR 96 L ++I LK H I+G DF T+ PRPETE LV L E+ Sbjct: 54 LLDSIFEQLKQHIPAQYIIGSADFCGHVFTVDERVLIPRPETEELVALIL-------EEN 106 Query: 97 D--VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154 D +R+LD+GTG+GA+ ++L ++ D+S +ALE+A+ NA N + D Sbjct: 107 DGEPLRVLDIGTGSGAIAISLALARLNWQVQASDVSEEALELAQENA--NQLEAVVDFKT 164 Query: 155 SDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214 SD + G +D+IVSNPPYI ++ +G V +P ++L DG + Y IA Sbjct: 165 SDVLDQIAGSYDLIVSNPPYISRDDLEEVGANVLASEPHLALFADRDGYAIYEKIAQQAP 224 Query: 215 RHLNKDGLCSVEIGYNQKVDVVRIF-ESRKLFLVNAFKDYGGNDRVLL 261 L DG +EIGY Q V +F E+ V KD G DR+++ Sbjct: 225 NVLTPDGKIYLEIGYKQGKKVKELFQEAFPNKRVRVLKDQFGQDRMVV 272 >gi|229176004|ref|ZP_04303500.1| Protein hemK [Bacillus cereus MM3] gi|228607497|gb|EEK64823.1| Protein hemK [Bacillus cereus MM3] Length = 283 Score = 102 bits (253), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 79/264 (29%), Positives = 125/264 (47%), Gaps = 25/264 (9%) Query: 11 LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70 LC V + ++++ + Q T I + ++ I ++G+ FY ++ + Sbjct: 28 LCHVLKTNRTGMLMNMREEITVEQETSFTEFIHKHVEGIPIQYMIGYEMFYGRSFFVNEE 87 Query: 71 TFEPRPETELLVDSALAFSLPRIEKR---DVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 PRPETE L+ L RIE+ + + + D+GTG+GA+ + L E+ V Sbjct: 88 VLIPRPETEELIVGVLE----RIERHFGDEKLHVADIGTGSGAISITLALENKNLHVYTV 143 Query: 128 DISCKALEIAKSNAVTNGVSERF--DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185 DI+ +++E+AK NA T G F L S ++ + + L DV+VSNPPYI L Sbjct: 144 DIAQESIEVAKENAKTLGAEVTFYHGDLLSPFYKTSQKL-DVVVSNPPYIPEEDWRGLSP 202 Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245 V++ +P+ +L GG DGL YR + + L K + + EIG Q DV K Sbjct: 203 VVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEIGVGQGEDV-------KGL 255 Query: 246 LVNAFK--------DYGGNDRVLL 261 L AF D G DR++ Sbjct: 256 LQQAFPHAHVEVVFDINGKDRMVF 279 >gi|301105206|ref|XP_002901687.1| methylase subunit of polypeptide release factor, putative [Phytophthora infestans T30-4] gi|262100691|gb|EEY58743.1| methylase subunit of polypeptide release factor, putative [Phytophthora infestans T30-4] Length = 261 Score = 102 bits (253), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 75/227 (33%), Positives = 117/227 (51%), Gaps = 33/227 (14%) Query: 40 NAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV 99 + + R K E + ++G ++F+++ ++ DT PR ++E+L+++ + P + Sbjct: 5 HCVERRSKGEPLAYVIGRKEFWSLEFKVTRDTLIPRSDSEILIETLMDQFHPETP----L 60 Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 RILD+GTG+G + L+ L E P GVG+DIS AL IAK NA +N + ER + L D Sbjct: 61 RILDIGTGSGCLLLSALSEFPRATGVGIDISAGALAIAKENAQSNKLEERSEFLLRD-LK 119 Query: 160 SVEGL-------------FDVIVSNPPYIESVIVDCLGLEVRDFDPRISL-DGGI----- 200 ++ GL FDVI+ NPPYI +D +G +V ++P I+L GG Sbjct: 120 TLPGLRSDVAEDEALFRRFDVILCNPPYIPGRELDLVGPDVLKYEPHIALFSGGAATADK 179 Query: 201 -----DGLSHYRTIADGVSRHLNKDGLCSVEIG-YNQKVDVVRIFES 241 GL YR + + V N VEIG +Q +V +F S Sbjct: 180 CDLDPKGLRMYRLLHESVD---NLKICLLVEIGSEDQAREVKELFSS 223 >gi|229105921|ref|ZP_04236545.1| Protein hemK [Bacillus cereus Rock3-28] gi|228677495|gb|EEL31748.1| Protein hemK [Bacillus cereus Rock3-28] Length = 283 Score = 102 bits (253), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 75/258 (29%), Positives = 120/258 (46%), Gaps = 13/258 (5%) Query: 11 LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70 LC V + ++++ + Q I + ++ I +LG+ FY ++ + Sbjct: 28 LCHVLKTNRTGMLMNMREEITAEQEKSFAEFIHKHVEGIPIQYMLGYEMFYGRSFFVNEE 87 Query: 71 TFEPRPETELLVDSALAFSLPRIEKR---DVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 PRPETE L+ L RIE+ + + + D+GTG+GA+ + L E+ V Sbjct: 88 VLIPRPETEELIVGVLE----RIERHFGNEKLHVADIGTGSGAISITLALENKNLHVYTV 143 Query: 128 DISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184 DI+ +++E+AK NA G F D L F + DV+VSNPPYI L Sbjct: 144 DIAQESIEVAKENAKALGAEVTFYHGDLLSP--FYKIHQKLDVVVSNPPYITEEDWRGLS 201 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-K 243 V++++P+ +L GG DGL YR + + L K + + EIG Q DV + + Sbjct: 202 PVVKEYEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEIGVGQGEDVKELLQQAFP 261 Query: 244 LFLVNAFKDYGGNDRVLL 261 V D G DR++ Sbjct: 262 HAHVEVVFDINGKDRMVF 279 >gi|150015293|ref|YP_001307547.1| HemK family modification methylase [Clostridium beijerinckii NCIMB 8052] gi|149901758|gb|ABR32591.1| modification methylase, HemK family [Clostridium beijerinckii NCIMB 8052] Length = 586 Score = 102 bits (253), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 71/234 (30%), Positives = 119/234 (50%), Gaps = 9/234 (3%) Query: 31 DDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSL 90 +D +++F + I + + IL +F + + PR +TE+LVD L Sbjct: 355 EDAEKYF--DLIEKRRNKMPVKYILNKCEFMGIEFYVEEGVLIPRGDTEILVDEVLKI-- 410 Query: 91 PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150 IE+ ++I DL +G+GAV ++L K +D +++ N N + +R Sbjct: 411 --IEENQEMQICDLCSGSGAVGISLAHFRQNIKVDLIDYYPIPEKVSLINIEKNKLEDRV 468 Query: 151 DTLQSDWFS-SVEG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207 ++SD S++ ++D+IVSNPPYIE + L +V++++P +L+GG DGL YR Sbjct: 469 FFIKSDLLEESIKNNKIYDIIVSNPPYIEECEIGKLMEDVKNYEPHTALNGGNDGLDFYR 528 Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 I D L + G+ + EIGYNQ V + E+ V KD+ DRV++ Sbjct: 529 KIIDQSQYTLRESGILAFEIGYNQGEAVKLLMENNGFTNVKIVKDFASLDRVVV 582 >gi|300871385|ref|YP_003786258.1| protein methyltransferase [Brachyspira pilosicoli 95/1000] gi|300689086|gb|ADK31757.1| protein methyltransferase [Brachyspira pilosicoli 95/1000] Length = 288 Score = 102 bits (253), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 72/262 (27%), Positives = 132/262 (50%), Gaps = 11/262 (4%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 +S + L V ++ ++I D L ++ + I R L +E I I+ ++FY Sbjct: 27 ESQTILMHVLNINKMKLISDSLRELTQKEVNNIEELINRRLNYEPISYIINKKEFYGFNF 86 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL----LKESPF 121 + ++ PRPETE L+D L + ++ ++ + I D+G G+G + + L L+++ Sbjct: 87 YVDNNVLIPRPETEELIDLVLDY----MKDKNNISICDIGGGSGNIAITLKKLFLEQNKN 142 Query: 122 FKGVGVDISCKALEIAKSNAVTN-GVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVI 179 ++IS A ++ K NA+ G + + + +D + + E +DVIVSN PY+ Sbjct: 143 IDITAIEISEGAFQVIKKNALNILGDEKLINIVNTDALTFIPENKYDVIVSNAPYVPLRD 202 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 D L ++ +F+P+ +L G DGL Y+ + ++L +G+ EI Y+Q ++ I Sbjct: 203 KDSLQKDL-EFEPQNALYSGYDGLDFYKAFLSIIKKYLKDNGVFFFEISYDQGEALINIC 261 Query: 240 ESRKLFLVNAFKDYGGNDRVLL 261 S + V KD G DR L+ Sbjct: 262 NSLNIKNVLVKKDLNGKDRFLV 283 >gi|225867309|ref|YP_002752687.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacillus cereus 03BB102] gi|225789080|gb|ACO29297.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacillus cereus 03BB102] Length = 283 Score = 102 bits (253), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 79/264 (29%), Positives = 125/264 (47%), Gaps = 25/264 (9%) Query: 11 LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70 LC V + ++++ + Q T +I + ++ I ++G FY ++ + Sbjct: 28 LCHVLKTNRTGLLMNMREEITAEQETSFTESIHKHVEGIPIQYMIGHEMFYGRSFFVNEE 87 Query: 71 TFEPRPETELLVDSALAFSLPRIEKR---DVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 PRPETE L+ L RIE+ + + + D+GTG+GA+ + L E+ V Sbjct: 88 VLIPRPETEELIVGVLE----RIERHFGDEKLHVADIGTGSGAISITLALENKNLHVYTV 143 Query: 128 DISCKALEIAKSNAVTNGVSERF--DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185 DI+ +++E+AK NA T G F L S ++ + + L DV+VSNPPYI L Sbjct: 144 DIAQESIEVAKENAKTLGAEVTFYHGDLLSPFYETGQKL-DVVVSNPPYIPEEDWRGLSP 202 Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245 V++ +P+ +L GG DGL YR + + L K + + EIG Q DV K Sbjct: 203 VVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEIGVGQGEDV-------KGL 255 Query: 246 LVNAFK--------DYGGNDRVLL 261 L AF D G DR++ Sbjct: 256 LQQAFPHAHVEVVFDINGKDRMVF 279 >gi|312131682|ref|YP_003999022.1| proteiN-(glutamine-n5) methyltransferase, release factor-specific [Leadbetterella byssophila DSM 17132] gi|311908228|gb|ADQ18669.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Leadbetterella byssophila DSM 17132] Length = 275 Score = 102 bits (253), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 75/222 (33%), Positives = 109/222 (49%), Gaps = 11/222 (4%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101 I R + E I ILG F N R ++ PRPETE LV A S P+ ++ Sbjct: 58 IERINQGEPIQYILGEAWFMNRRFHVNPSVLIPRPETEELVTHVSALS-PK-------KV 109 Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS- 160 LDLGTG+G + + + E+P + G+DIS ALE AK NA + + +F F + Sbjct: 110 LDLGTGSGCIPVNIALENPEAEVFGIDISEHALETAKRNAEEHKANVKFALANMLDFQNP 169 Query: 161 -VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL-DGGIDGLSHYRTIADGVSRHLN 218 + FD+I+SNPPY++ + V DF+P ++L +D L YR IAD +HL Sbjct: 170 FLVQEFDLIISNPPYVKENEKPEMRKNVLDFEPHLALFVSDLDPLIFYRAIADIAWKHLA 229 Query: 219 KDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 G +EI + +F + V KD+ G +R L Sbjct: 230 PRGALWLEINSYLGKETAELFSQKGYKHVRLLKDFFGKERFL 271 >gi|227499755|ref|ZP_03929855.1| polypeptide chain release factor methyltransferase HemK [Anaerococcus tetradius ATCC 35098] gi|227218141|gb|EEI83407.1| polypeptide chain release factor methyltransferase HemK [Anaerococcus tetradius ATCC 35098] Length = 272 Score = 101 bits (252), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 72/251 (28%), Positives = 120/251 (47%), Gaps = 8/251 (3%) Query: 11 LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70 L + + +I+ L++ R L I + K + +G +F+ + + Sbjct: 26 LTYLLNTNKSSIILRSGEELNNEIRVKLEEIIDKCEKGYPLQYAIGQWEFFGLNFKVDER 85 Query: 71 TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130 PR ETE++VD + K+D +ILD+GTG+GA+ L+L K + DI Sbjct: 86 ALIPRFETEIIVDYLIKAPF----KKD--KILDIGTGSGAIALSLAKNLKASDILASDIE 139 Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDF 190 +AL +A+ N +S ++SD F + G FD+I+SNPPYI S + L + + Sbjct: 140 DRALSLAEENKKRLKIS-NVSFIKSDLFEEISGKFDIIISNPPYINSKDFEKLDKTLY-Y 197 Query: 191 DPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAF 250 +P+ +L +GL Y+ I S +LN+ EIGY+QK D+ + + Sbjct: 198 EPKSALLAEENGLYFYKRIIKDASSYLNEGARLVFEIGYDQKSDISSLLNESDFKNIICI 257 Query: 251 KDYGGNDRVLL 261 KDY DR ++ Sbjct: 258 KDYNDFDRFII 268 >gi|167620579|ref|ZP_02389210.1| hemK protein [Burkholderia thailandensis Bt4] Length = 246 Score = 101 bits (252), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 75/234 (32%), Positives = 118/234 (50%), Gaps = 17/234 (7%) Query: 34 QRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRI 93 +R+ A R E + ++ G R+F+ + ++ D PRPETELLV++AL I Sbjct: 15 ERYLALEA--RRAAGEPVAQLTGAREFFGLDFDVTPDVLIPRPETELLVETALDA----I 68 Query: 94 EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA------VTNGVS 147 + +LDLG G+GA+ +++ P + +D S AL++A+ NA G Sbjct: 69 DGIASPCVLDLGAGSGAIAVSIASVRPDARVWALDRSAAALDVARRNARKLLDPARAGGP 128 Query: 148 ERFDTLQSDWFSSVE-GL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSH 205 RF L+SDW+++++ GL F V+VSNPPYI ++R F+PR +L DGL+ Sbjct: 129 LRF--LESDWYAALDPGLRFHVVVSNPPYIARHDPHLAEGDLR-FEPRGALTDEDDGLAA 185 Query: 206 YRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRV 259 RTI G + G +E GY+Q V + E+ V + D +R Sbjct: 186 IRTIVAGAHAFVAPGGALWIEHGYDQAAAVRALLEAAGFADVESLADLASIERA 239 >gi|169826580|ref|YP_001696738.1| HemK-like protein [Lysinibacillus sphaericus C3-41] gi|168991068|gb|ACA38608.1| HemK-like protein [Lysinibacillus sphaericus C3-41] Length = 285 Score = 101 bits (252), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 74/280 (26%), Positives = 126/280 (45%), Gaps = 20/280 (7%) Query: 1 MQALRDSHSFLC--------------RVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSL 46 M+AL + SFL + G S +V++ L + Q+ I + Sbjct: 7 MEALEWASSFLVDNGREQTAARIVMQHILGTSYSEVMLHLQDKLTEAQQVKFKALIEEHV 66 Query: 47 KHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGT 106 + +G +FY + PRPETE L+ + + ++ + +++ D+GT Sbjct: 67 NGRPVQYCVGSEEFYGRSFIVDESVLIPRPETEELILGTIN-RMTKLFQHQALKVADIGT 125 Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LF 165 G+GA+ +++ E P V D+S AL A+ NA + D D + + G F Sbjct: 126 GSGAIAISMKLECPTLTVVATDLSEAALATAQKNA--QRLEANIDFRLGDLTAPLAGEKF 183 Query: 166 DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225 D+++SNPPYI + V +P +L DGL YR +A+ + ++N+ L + Sbjct: 184 DIVLSNPPYIAFEEAQAMSDVVLKHEPHSALFAEEDGLILYRQLAEQLPAYMNRPALIGL 243 Query: 226 EIGYNQKVDVVRIFE-SRKLFLVNAFKDYGGNDRVLLFCR 264 EIGY Q V + F+ S ++ KD G R ++FC Sbjct: 244 EIGYTQGEKVAKFFQDSFPQATISIEKDINGKPR-MIFCE 282 >gi|118480363|ref|YP_897514.1| HemK family modification methylase [Bacillus thuringiensis str. Al Hakam] gi|118419588|gb|ABK88007.1| modification methylase, HemK family [Bacillus thuringiensis str. Al Hakam] Length = 283 Score = 101 bits (252), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 79/264 (29%), Positives = 125/264 (47%), Gaps = 25/264 (9%) Query: 11 LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70 LC V ++ ++++ + Q T I + ++ I ++G FY ++ + Sbjct: 28 LCHVLKMNRTGLLMNMREEITAEQETSFTEFIHKHVEGIPIQYMIGHEMFYGRSFFVNEE 87 Query: 71 TFEPRPETELLVDSALAFSLPRIEKR---DVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 PRPETE L+ L RIE+ + + + D+GTG+GA+ + L E+ V Sbjct: 88 VLIPRPETEELIVGVLE----RIERHFGDEKLHVADIGTGSGAISITLALENKNLHVYTV 143 Query: 128 DISCKALEIAKSNAVTNGVSERF--DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185 DI+ +++E+AK NA T G F L S ++ + + L DV+VSNPPYI L Sbjct: 144 DIAQESIEVAKENAKTLGAEVTFYHGDLLSPFYETGQKL-DVVVSNPPYIPEEDWRGLSP 202 Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245 V++ +P+ +L GG DGL YR + + L K + + EIG Q DV K Sbjct: 203 VVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEIGVGQGEDV-------KGL 255 Query: 246 LVNAFK--------DYGGNDRVLL 261 L AF D G DR++ Sbjct: 256 LQQAFPHAHVEVVFDINGKDRMVF 279 >gi|121997790|ref|YP_001002577.1| HemK family modification methylase [Halorhodospira halophila SL1] gi|121589195|gb|ABM61775.1| [protein release factor]-glutamine N5-methyltransferase [Halorhodospira halophila SL1] Length = 281 Score = 101 bits (252), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 77/260 (29%), Positives = 123/260 (47%), Gaps = 9/260 (3%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L V G+ + P+ + I R E + ++ +F ++ L Sbjct: 29 DAELLLAEVLGVGRSHLFAFPERPIPAATIEAYRALIARRRTGEPVAYLMRRCEFRDLTL 88 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 +++ PRPETE LV+ A+A LP + +L+LGTG+GA+ LA+ E P + Sbjct: 89 SVTPAVLVPRPETEHLVEQAVA-CLPAGGQ-----VLELGTGSGAIALAVAHERPDARIT 142 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLG 184 + S AL +A+ N G+SE T DW + G FDVIVSNPPY+++ + G Sbjct: 143 ATERSTAALAVAQENRHRLGLSEVHLT-PGDWNEGIPPGPFDVIVSNPPYVQTTAAE-WG 200 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 + +PR +L G DGL+ R++ + L + G +E G Q V + ++ L Sbjct: 201 NGALEHEPREALAAGHDGLADIRSLVPPATAELARGGWLILEHGARQGGAVRELLQAAGL 260 Query: 245 FLVNAFKDYGGNDRVLLFCR 264 V D G +R+ L R Sbjct: 261 EAVRTECDLAGLERLTLGRR 280 >gi|254447043|ref|ZP_05060510.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [gamma proteobacterium HTCC5015] gi|198263182|gb|EDY87460.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [gamma proteobacterium HTCC5015] Length = 285 Score = 101 bits (252), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 73/225 (32%), Positives = 112/225 (49%), Gaps = 7/225 (3%) Query: 16 GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSL-KHESIHRILGWRDFYNVRLTLSSDTFEP 74 G S + I D D VL + Q+ + + R + + + G F + ++ DT P Sbjct: 41 GRSPAEPIEDADIVLSEDQQQAAFDWLQRRIDTRKPTAYLTGQAWFCGLPFEVTEDTLIP 100 Query: 75 RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134 R L+ + LPR +R +LDL TG G + +A P + VG DIS AL Sbjct: 101 RSPIAELIQQQFSPWLPRPPQR----VLDLCTGGGCIAIACAYAFPDAQVVGTDISEAAL 156 Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194 +A+ N + + R L SD FS+VEG FD+IVSNPPY+++ + L E R +P + Sbjct: 157 AVARRNVAAHQLQGRVQCLSSDVFSNVEGCFDLIVSNPPYVDAEDMAALPAEYR-HEPEL 215 Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 +L DGL R I V +L+ DG+ +E+G N + +V + Sbjct: 216 ALASERDGLGITRRILADVGNYLSDDGVLVLEVG-NSETALVEAY 259 >gi|113953082|ref|YP_729766.1| methyltransferase, HemK family protein [Synechococcus sp. CC9311] gi|113880433|gb|ABI45391.1| methyltransferase, HemK family protein [Synechococcus sp. CC9311] Length = 306 Score = 101 bits (252), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 77/215 (35%), Positives = 109/215 (50%), Gaps = 9/215 (4%) Query: 54 ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRIL-DLGTGTGAVC 112 I WRD L +SSD PR ETELL++ AL LP + RDV I DLGTG+GA+ Sbjct: 83 ICPWRDL---ELEVSSDALIPRQETELLIELALQ-CLPE-DARDVEGIWADLGTGSGALA 137 Query: 113 LALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIV 169 AL + P ++G VD S AL +A+ N + + W+ ++ G D+++ Sbjct: 138 AALARVFPSWQGHAVDSSGSALALAERNLIALAGKSDWQLHLGSWWEPLKPWWGQIDLVL 197 Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY 229 SNPPYI + ++D L V+D +P ++L GG DGL R I SR L G +E + Sbjct: 198 SNPPYIPTAVMDELAPVVKDHEPHLALCGGEDGLDCCRQIIRDASRALAPGGWILLEHHH 257 Query: 230 NQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 +Q V+++ L A D G R L R Sbjct: 258 DQSAMVLKLLSDAGLERPEARYDLQGIPRFALAQR 292 >gi|218264487|ref|ZP_03478320.1| hypothetical protein PRABACTJOHN_04020 [Parabacteroides johnsonii DSM 18315] gi|218221980|gb|EEC94630.1| hypothetical protein PRABACTJOHN_04020 [Parabacteroides johnsonii DSM 18315] Length = 291 Score = 101 bits (252), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 76/257 (29%), Positives = 122/257 (47%), Gaps = 18/257 (7%) Query: 13 RVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTF 72 RV + H + D L + ++ + + + R + E I ILG DFY+++ + Sbjct: 40 RVCNIQPHHFLFCKDKELPESEKSRIHDIVERLKQMEPIQYILGTADFYSLQFEVDPSVL 99 Query: 73 EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCK 132 PRPETE LV+ + L +K+ ++ILD+GTG+G + + L K + DIS + Sbjct: 100 IPRPETEELVEQVI---LDNADKK--IKILDIGTGSGCIAVTLRKHLKKASVIATDISAE 154 Query: 133 ALEIAKSNAVTNGVSERFDTLQSDWFSSVEG------LFDVIVSNPPYIESVIVDCLGLE 186 AL A+ NA N + F +Q+D + + DVIVSNPPYI+ + Sbjct: 155 ALVTARRNAKRNNTTVTF--IQTDILDPEKAEMDIPFILDVIVSNPPYIKEEEKKDMERN 212 Query: 187 VRDFDPRISL---DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 V D++P ++L D D L +Y IA + L ++G EI VV + E Sbjct: 213 VLDYEPHLALFVPDN--DPLLYYWHIAHFGKKKLRRNGRLYFEINAACSNMVVEMLEEEG 270 Query: 244 LFLVNAFKDYGGNDRVL 260 + +D G DR++ Sbjct: 271 YKNIELIQDLSGRDRII 287 >gi|256820610|ref|YP_003141889.1| modification methylase, HemK family [Capnocytophaga ochracea DSM 7271] gi|256582193|gb|ACU93328.1| modification methylase, HemK family [Capnocytophaga ochracea DSM 7271] Length = 281 Score = 101 bits (252), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 73/248 (29%), Positives = 125/248 (50%), Gaps = 12/248 (4%) Query: 18 SSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPE 77 S ++ + D++L + + AI + I ILG +F++ R ++ + PRPE Sbjct: 38 SKATILANSDTLLTEDIAQPILQAIRELQTAKPIQYILGETEFFSNRFFVNENVLIPRPE 97 Query: 78 TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137 TE LVD L P +K + ++ILD+GTG+G + ++L K P +D+S +AL++A Sbjct: 98 TEELVDWVLQ-EYP--DKSEKIKILDVGTGSGCIAISLAKALPNAVVTAIDVSEEALKVA 154 Query: 138 KSNAVTNGVSERFDTLQSDWF--SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195 K NA N V F LQ D ++ +D+I+SNPPY+ + + V +++P ++ Sbjct: 155 KRNAELNSVVTHF--LQQDILRIETLSDKYDIIISNPPYVRELEKKEIHHNVLEYEPHLA 212 Query: 196 L---DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKD 252 L D + L Y IA + LN +G EI ++ + E + + +D Sbjct: 213 LFVPDN--NPLLFYDKIATLAQQSLNPNGSLFFEINQYLGQEMQTLLEQKHFTEITLRQD 270 Query: 253 YGGNDRVL 260 GNDR++ Sbjct: 271 LFGNDRMI 278 >gi|212640539|ref|YP_002317059.1| methylase of polypeptide chain release factor [Anoxybacillus flavithermus WK1] gi|212562019|gb|ACJ35074.1| Methylase of polypeptide chain release factor [Anoxybacillus flavithermus WK1] Length = 283 Score = 101 bits (252), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 66/208 (31%), Positives = 106/208 (50%), Gaps = 11/208 (5%) Query: 27 DSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL 86 D + + ++ F+ + +L+H I I+G FY ++ PRPETE LV L Sbjct: 47 DPMDEASEQTFMADVKKHALQHVPIQYIIGHEQFYGRTFIVNEHVLIPRPETEELVSHVL 106 Query: 87 AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146 A + + + ++D+GTG+GA+ + L E P + G+DI+ +LE+AK NA G Sbjct: 107 ARTTEK-----ALSVVDVGTGSGAIAITLSLERPTWHVYGIDIAVSSLEVAKRNANQLGA 161 Query: 147 SERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203 + D LQ ++ DV+VSNPPYI + + L V+ +P +L GG DGL Sbjct: 162 CVHWFEGDLLQPIIDRGIQ--VDVVVSNPPYIPASDIPTLSPVVQK-EPLRALVGGEDGL 218 Query: 204 SHYRTIADGVSRHLNKDGLCSVEIGYNQ 231 YR + + + + L + EIG+ Q Sbjct: 219 LFYRRLMEQLPHVVTSQALIAFEIGHGQ 246 >gi|116491554|ref|YP_811098.1| methylase of polypeptide chain release factor [Oenococcus oeni PSU-1] gi|290891159|ref|ZP_06554221.1| hypothetical protein AWRIB429_1611 [Oenococcus oeni AWRIB429] gi|116092279|gb|ABJ57433.1| Methylase of polypeptide chain release factor [Oenococcus oeni PSU-1] gi|290479123|gb|EFD87785.1| hypothetical protein AWRIB429_1611 [Oenococcus oeni AWRIB429] Length = 275 Score = 101 bits (252), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 71/216 (32%), Positives = 112/216 (51%), Gaps = 11/216 (5%) Query: 49 ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108 E + +LG+ +FY ++ P ET L+D L +E D ILD+GTG+ Sbjct: 63 EPVQYVLGFANFYGRDFSVGPQVLIPEVETAELIDHVKNAVLLPLE--DDFSILDIGTGS 120 Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEGLFDV 167 G + + L E + VDIS AL++AK N+ +E +F ++SD +V GLFD+ Sbjct: 121 GNLAITLALELKAKNVLAVDISQDALDLAKKNSQNLSATEVKF--IRSDLLENVNGLFDL 178 Query: 168 IVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227 IVSNPPY+++ + + +V DF+P +L G DG+ +R + +HL DG E+ Sbjct: 179 IVSNPPYVKTGEKE-IDKQVVDFEPHQALYAGADGMDVFRKMIPETVKHLKPDGYAIFEM 237 Query: 228 GYNQKVDVVRIFESRKLF---LVNAFKDYGGNDRVL 260 Y Q ++ + +K F + FKD G DR + Sbjct: 238 DYRQGDEIKSLI--KKNFPKAQIEIFKDISGLDRFI 271 >gi|194477095|ref|YP_002049274.1| modification methylase, HemK family protein [Paulinella chromatophora] gi|171192102|gb|ACB43064.1| modification methylase, HemK family protein [Paulinella chromatophora] Length = 317 Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 71/214 (33%), Positives = 105/214 (49%), Gaps = 12/214 (5%) Query: 54 ILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL-AFSLPRIE-----KRDVVRILDLGTG 107 I WRD Y L S PR ETELLVD AL S R + + R DLGTG Sbjct: 100 ICPWRDLY---LKSDSGVLIPRQETELLVDLALHCVSHSRHKLFVGGELPTYRWADLGTG 156 Query: 108 TGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GL 164 +GA+ +AL + P + G D + +A ++ N +++ Q DWF + G Sbjct: 157 SGAIAVALSRALPSWLGHATDYTNEAFYQSERNIKQLAFNKKVVLTQGDWFLPLHPWWGQ 216 Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224 F++I++NPPYI S +V+ L + + +PR+SLDGG DGL R + R L G Sbjct: 217 FNLILANPPYIPSKVVNSLETNILNNEPRLSLDGGHDGLKSIRILVKEAPRILITGGWIL 276 Query: 225 VEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258 +E ++Q ++++ L V +D G R Sbjct: 277 IEHHHDQNACIMQLMIKAGLSNVQWARDLDGKLR 310 >gi|33519809|ref|NP_878641.1| putative protoporphyrinogen oxidase [Candidatus Blochmannia floridanus] gi|33504154|emb|CAD83416.1| methylase of polypeptide chain release factors [Candidatus Blochmannia floridanus] Length = 281 Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 75/259 (28%), Positives = 126/259 (48%), Gaps = 13/259 (5%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 RDS L VT S Q++ ++ L Q L + I R K E I ++G ++F+++ Sbjct: 23 RDSEIILEIVTKKSREQLLTFEETTLTPEQIKKLQSLIDRRKKSEPIAYLVGSKEFWSLS 82 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 +S F PR +TE L++ L I + +++LDLG+G G++ LAL E P + Sbjct: 83 FKISPGVFIPRTDTECLIEEVLNL----IPDCNHLKVLDLGSGVGSIALALASERPTWNI 138 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTL---QSDWFSSV-EGLFDVIVSNPPYIESVIV 180 G+D +A+ + A+ N S +F + QS+WF+ + + F +IVSNPPYI + Sbjct: 139 TGIDQQQQAVIL----AIKNQKSYKFRNVEFKQSNWFTKIKKNKFHLIVSNPPYINEHDL 194 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 L ++ F+P+ +L GL I HL G +E G+NQ + + Sbjct: 195 HFLSQDIH-FEPKSALVSPYYGLKDLIIICKQSINHLYPMGWLCLEHGWNQGKYIRTLLH 253 Query: 241 SRKLFLVNAFKDYGGNDRV 259 + ++ DY +R+ Sbjct: 254 AIGFNNIHTILDYHQYERI 272 >gi|229099761|ref|ZP_04230686.1| Protein hemK [Bacillus cereus Rock3-29] gi|228683650|gb|EEL37603.1| Protein hemK [Bacillus cereus Rock3-29] Length = 283 Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 75/258 (29%), Positives = 122/258 (47%), Gaps = 13/258 (5%) Query: 11 LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70 LC V + ++++ + Q I + ++ I +LG+ FY ++ + Sbjct: 28 LCHVLKTNRTGMLMNMREEITAEQEKSFAEFIHKHVEGIPIQYMLGYEMFYGRSFFVNEE 87 Query: 71 TFEPRPETELLVDSALAFSLPRIEKR---DVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 PRPETE L+ L RIE+ + + + D+GTG+GA+ + L E+ V Sbjct: 88 VLIPRPETEELIVGVLE----RIERHFGNEKLHVADIGTGSGAISITLALENKNLHVYTV 143 Query: 128 DISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184 DI+ +++E+AK NA + G F D L F ++ DV+VSNPPYI L Sbjct: 144 DIARESIEVAKENAKSLGAEVTFYHGDLLSP--FYKIDQKLDVVVSNPPYIPEEDWRGLS 201 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 V++ +P+ +L GG DGL YR + + L K + + EIG Q DV + + Sbjct: 202 PVVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEIGVGQGEDVKELLQQVFP 261 Query: 245 FL-VNAFKDYGGNDRVLL 261 + V D G DR++ Sbjct: 262 YAHVEVVFDINGKDRMVF 279 >gi|218906506|ref|YP_002454340.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacillus cereus AH820] gi|229124832|ref|ZP_04254010.1| Protein hemK [Bacillus cereus 95/8201] gi|218534962|gb|ACK87360.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacillus cereus AH820] gi|228658623|gb|EEL14285.1| Protein hemK [Bacillus cereus 95/8201] Length = 283 Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 80/264 (30%), Positives = 124/264 (46%), Gaps = 25/264 (9%) Query: 11 LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70 LC V + ++++ + Q T I + +K I ++G FY ++ + Sbjct: 28 LCHVLKTNRTGLLMNMREEITAEQETSFTEFIHKHVKGIPIQYMIGHEMFYGRSFFVNEE 87 Query: 71 TFEPRPETELLVDSALAFSLPRIEKR---DVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 PRPETE L+ L RIE+ + + + D+GTG+GA+ + L E+ V Sbjct: 88 VLIPRPETEELIVGVLE----RIERHFGDEKLHVADIGTGSGAISITLALENKNLYVYTV 143 Query: 128 DISCKALEIAKSNAVTNGVSERF--DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185 DI+ +++E+AK NA T G F L S ++ + + L DV+VSNPPYI L Sbjct: 144 DIAQESIEVAKENAKTLGAEVTFYHGDLLSPFYETGQKL-DVVVSNPPYIPEEDWRGLSP 202 Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245 V++ +P+ +L GG DGL YR + + L K + + EIG Q DV K Sbjct: 203 VVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEIGVGQGEDV-------KGL 255 Query: 246 LVNAFK--------DYGGNDRVLL 261 L AF D G DR++ Sbjct: 256 LQQAFPHAHVEVVFDINGKDRMVF 279 >gi|207721784|ref|YP_002252222.1| methylase of polypeptide chain release factors protein [Ralstonia solanacearum MolK2] gi|206586948|emb|CAQ17532.1| methylase of polypeptide chain release factors protein [Ralstonia solanacearum MolK2] Length = 245 Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 82/223 (36%), Positives = 109/223 (48%), Gaps = 15/223 (6%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 ++ + VTGLS Q+I +D+ R L R L E + +LG R+F+ Sbjct: 31 EARMLVSHVTGLSRVQLITQDTYAIDNGVRMRLAELATRRLAGEPMAYLLGEREFFGRLF 90 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG--AVCLALLKESPFFK 123 ++ PRP+TELLV+ AL RIE RD +LDLGTG+G AV +AL + + Sbjct: 91 QVTPAVLIPRPDTELLVEQALD----RIEDRDAPDVLDLGTGSGIIAVTVALARRD--AR 144 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF-----SSVEGLFDVIVSNPPYIESV 178 D S AL +A NA T G + L DW+ S FD+IVSNPPYI S Sbjct: 145 VWATDASADALAVAAGNAQTLGAANVHVAL-GDWYGALPESDAPPAFDLIVSNPPYIASA 203 Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221 ++R F+P +L DGL H RTI G L DG Sbjct: 204 DAHLDQGDLR-FEPAGALTDHGDGLRHLRTIVAGAPARLAADG 245 >gi|218235275|ref|YP_002370105.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacillus cereus B4264] gi|218163232|gb|ACK63224.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacillus cereus B4264] Length = 283 Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 75/258 (29%), Positives = 122/258 (47%), Gaps = 13/258 (5%) Query: 11 LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70 LC V ++ ++++ + + Q T I + ++ I ++G+ FY ++ + Sbjct: 28 LCHVLKVNRTGLLMNMREEITEEQEKSFTEFIHKHVEGIPIQYMIGYEMFYGRSFFVNEE 87 Query: 71 TFEPRPETELLVDSALAFSLPRIEKR---DVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 PRPETE L+ L RIE+ + + + D+GTG+GA+ + L E+ V Sbjct: 88 VLIPRPETEELIVGVLE----RIERHFGDEKLHVADIGTGSGAISITLALENKNLHVYTV 143 Query: 128 DISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184 DI+ +++E+AK NA G F D L F DV+VSNPPYI L Sbjct: 144 DIAQESIEVAKENAKALGAVVTFYHGDLLSP--FHKTGQKLDVVVSNPPYIPEEDWRGLS 201 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-K 243 V++ +P+ +L GG DGL YR + + L K + + EIG Q DV ++ + Sbjct: 202 PVVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEIGVGQGEDVKKLLQQAFP 261 Query: 244 LFLVNAFKDYGGNDRVLL 261 V D G DR++ Sbjct: 262 HAHVEVVFDINGKDRMVF 279 >gi|229020547|ref|ZP_04177292.1| Protein hemK [Bacillus cereus AH1273] gi|229026768|ref|ZP_04183100.1| Protein hemK [Bacillus cereus AH1272] gi|228734491|gb|EEL85153.1| Protein hemK [Bacillus cereus AH1272] gi|228740767|gb|EEL91020.1| Protein hemK [Bacillus cereus AH1273] Length = 283 Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 75/257 (29%), Positives = 123/257 (47%), Gaps = 11/257 (4%) Query: 11 LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70 LC V + ++++ + Q T I + ++ I ++G+ FY ++ + Sbjct: 28 LCHVLKTNRTGMLMNMREEITAEQETSFTEFIHKHVEGIPIQYMMGYEIFYGRSFFVNEE 87 Query: 71 TFEPRPETELLVDSALAFSLPRIEKR---DVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 PRPETE L+ L RIE+ + + + D+GTG+GA+ + L E+ V Sbjct: 88 VLIPRPETEELIVGVLE----RIERHFGNEELHVADIGTGSGAISITLALENKNLHVYTV 143 Query: 128 DISCKALEIAKSNAVTNGVSERF--DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185 DI+ +++E+AK NA G F L S ++ + + L DV+VSNPPYI L Sbjct: 144 DIAQESIEVAKENAKALGAEVTFYHGDLLSPFYETGQKL-DVVVSNPPYIPEEDWRGLST 202 Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KL 244 V++ +P+ +L GG DGL YR + + L K + + EIG Q DV + + Sbjct: 203 VVKEHEPKRALVGGEDGLDFYRRFMEELPNVLKKKAIVAFEIGVGQGEDVKALLQQTFPH 262 Query: 245 FLVNAFKDYGGNDRVLL 261 V D G DR++ Sbjct: 263 AHVEVVFDINGKDRMVF 279 >gi|225621001|ref|YP_002722259.1| modification methylase, HemK family [Brachyspira hyodysenteriae WA1] gi|225215821|gb|ACN84555.1| modification methylase, HemK family [Brachyspira hyodysenteriae WA1] Length = 290 Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 72/241 (29%), Positives = 125/241 (51%), Gaps = 16/241 (6%) Query: 27 DSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL 86 DS ++ +RF I R + +E + I+ ++FY + + ++ PRPETE L+D L Sbjct: 53 DSDINKIERF-----INRRINYEPLSYIINKKEFYGLDFYVDNNVLIPRPETEELIDLVL 107 Query: 87 AFSLPRIEKRDVVRILDLGTGTGAVCLAL----LKESPFFKGVGVDISCKALEIAKSNAV 142 ++ D + I D+G+G+G + + L L ++ ++IS A E+ K NA+ Sbjct: 108 DYT----NDEDNIFICDIGSGSGNIPITLKRLFLDQNKNIDITAIEISNGAFEVIKKNAL 163 Query: 143 TN-GVSERFDTLQSDWFS-SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200 G + + + +D + + E FD+IVSN PY+ D L ++ +F+P+ +L G Sbjct: 164 NILGDEKIINIINADALTFTPENKFDIIVSNAPYVPLRDKDLLQKDL-EFEPQNALYSGY 222 Query: 201 DGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 DGL Y++ + ++L DG EIGY+Q ++ I S + V+ KD G DR L Sbjct: 223 DGLDFYKSFLSIIEKYLKDDGAFFFEIGYDQGEALINICNSLDIKNVSVKKDLSGKDRFL 282 Query: 261 L 261 + Sbjct: 283 V 283 >gi|116873907|ref|YP_850688.1| HemK family modification methylase [Listeria welshimeri serovar 6b str. SLCC5334] gi|116742785|emb|CAK21909.1| modification methylase, HemK family [Listeria welshimeri serovar 6b str. SLCC5334] Length = 283 Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 75/219 (34%), Positives = 102/219 (46%), Gaps = 10/219 (4%) Query: 44 RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103 R L E + IL FY ++ D PRPETE LV A F ++K V+ +LD Sbjct: 62 RYLAGEPVQYILKTAPFYGYDFLVTEDVLIPRPETEELVACAETF----LKKHPVMNVLD 117 Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSS 160 + TG+G + +AL K P DIS AL +AK NA+ RF D L++ F Sbjct: 118 VCTGSGIIAIALKKAFPNITFTASDISGPALAVAKKNALLLNADIRFVETDLLET--FKH 175 Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220 FD+I++NPPYI + V +P ++L DG++ Y D + LN Sbjct: 176 NGERFDMIIANPPYISEAEKAAMSDYVLKNEPSLALFAENDGMAIYERFVDNLKYVLNTS 235 Query: 221 GLCSVEIGYNQKVDVVRIFE-SRKLFLVNAFKDYGGNDR 258 VEIGY Q V ++FE S V KD DR Sbjct: 236 FWVGVEIGYTQGERVKQLFEKSYPHSTVLIHKDINSKDR 274 >gi|331270452|ref|YP_004396944.1| methyltransferase [Clostridium botulinum BKT015925] gi|329127002|gb|AEB76947.1| Methyltransferase [Clostridium botulinum BKT015925] Length = 282 Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 67/214 (31%), Positives = 108/214 (50%), Gaps = 7/214 (3%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110 + ILG +F + + PR +TE+LV+ + I + I D+ G+GA Sbjct: 70 VKYILGECEFMGLNFNVKKGVLIPRADTEILVEEVIK----EIRENGYNNICDVCCGSGA 125 Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG---LFDV 167 + +++ K + DIS A+E+ KSN ++++ +SD + ++DV Sbjct: 126 IGISIAKYINKTRVDCYDISDIAIEVTKSNINKLELNDKVYVYKSDLLDEAKKQNKMYDV 185 Query: 168 IVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227 IVSNPPYI+ ++ L +V++++P I+L GG DGL Y I LN+ GL + EI Sbjct: 186 IVSNPPYIKEDVIPTLMKDVKEYEPYIALCGGKDGLYFYNKITKDSVVFLNRGGLLAFEI 245 Query: 228 GYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 GY+Q DV I + KD G DRV++ Sbjct: 246 GYDQGKDVEEILIQNGFSNIRVIKDLAGLDRVVV 279 >gi|52140234|ref|YP_086597.1| HemK family modification methylase [Bacillus cereus E33L] gi|51973703|gb|AAU15253.1| modification methylase, HemK family [Bacillus cereus E33L] Length = 283 Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 78/259 (30%), Positives = 126/259 (48%), Gaps = 15/259 (5%) Query: 11 LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70 LC V + ++++ + Q T I + ++ I ++G FY ++ + Sbjct: 28 LCHVLKTNRTGLLMNMREEITVEQETSFTEFIHKHVEGIPIQYMIGHEMFYGRSFFVNEE 87 Query: 71 TFEPRPETELLVDSALAFSLPRIEKR---DVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 PRPETE L+ L RIE+ + + + D+GTG+GA+ + L E+ V Sbjct: 88 VLIPRPETEELIVGVLE----RIERHFGDEKLHVADIGTGSGAISITLALENKNLHVYTV 143 Query: 128 DISCKALEIAKSNAVTNGVSERF--DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185 DI+ +++E+AK NA T G F L S ++ + + L DV+VSNPPYI L Sbjct: 144 DIAQESIEVAKENAKTLGAEVTFYHGDLLSPFYETGQKL-DVVVSNPPYIPEEDWRGLSP 202 Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245 V++ +P+ +L GG DGL YR + + + L K + + EIG Q DV + +K F Sbjct: 203 VVKEHEPKRALVGGEDGLDFYRRFMEELPKVLQKKAIVAFEIGVGQGEDVKGLL--QKAF 260 Query: 246 ---LVNAFKDYGGNDRVLL 261 V D G DR++ Sbjct: 261 PHAHVEVVFDINGKDRMVF 279 >gi|120434996|ref|YP_860682.1| modification methylase HemK [Gramella forsetii KT0803] gi|117577146|emb|CAL65615.1| modification methylase HemK [Gramella forsetii KT0803] Length = 282 Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 68/217 (31%), Positives = 107/217 (49%), Gaps = 10/217 (4%) Query: 16 GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75 G+ + ++P + ++ +A+ R KHE I I G +F+ + ++ PR Sbjct: 36 GMQKVDIALNPTQEISKEEQTKFESALNRLKKHEPIQYITGNTEFFTRKFLVNKSVLIPR 95 Query: 76 PETELLVDSALAFSLPRIEKRDV---VRILDLGTGTGAVCLALLKESPFFKGVGVDISCK 132 PETE LV+ ++ + R ++ILD+GTG+G + ++L KE K DIS + Sbjct: 96 PETEELVEWIIS------DHRSTGQELKILDIGTGSGCIPISLAKELEDAKVSSFDISSE 149 Query: 133 ALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDP 192 AL IAK NA N F L +EG FD+IVSNPPY+ + + V D +P Sbjct: 150 ALLIAKRNAKLNAADVLFRKLNILEAEELEGQFDIIVSNPPYVRELEKKEMHQNVLDHEP 209 Query: 193 RISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228 +++L + L Y+ IA+ + LN G EI Sbjct: 210 KLALYVEDENALIFYKKIAELAVKSLNPAGCLYFEIN 246 >gi|118586289|ref|ZP_01543744.1| protoporphyrinogen oxidase [Oenococcus oeni ATCC BAA-1163] gi|118433284|gb|EAV39995.1| protoporphyrinogen oxidase [Oenococcus oeni ATCC BAA-1163] Length = 275 Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 70/216 (32%), Positives = 112/216 (51%), Gaps = 11/216 (5%) Query: 49 ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108 E + +LG+ +FY ++ P ET L+D L +E D ILD+GTG+ Sbjct: 63 EPVQYVLGFANFYGRDFSVGPQVLIPEVETAELIDHVKNAVLLPLE--DDFSILDIGTGS 120 Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEGLFDV 167 G + + L E + VDIS AL++AK N+ +E +F ++SD +V G+FD+ Sbjct: 121 GNLAITLALELKAKNVLAVDISQDALDLAKKNSQNLSATEVKF--IRSDLLENVNGMFDL 178 Query: 168 IVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227 IVSNPPY+++ + + +V DF+P +L G DG+ +R + +HL DG E+ Sbjct: 179 IVSNPPYVKTGEKE-IDKQVVDFEPHQALYAGADGMDVFRKMIPETVKHLKPDGYAIFEM 237 Query: 228 GYNQKVDVVRIFESRKLF---LVNAFKDYGGNDRVL 260 Y Q ++ + +K F + FKD G DR + Sbjct: 238 DYRQGDEIKSLI--KKNFPKAQIEIFKDISGLDRFI 271 >gi|163943016|ref|YP_001647900.1| HemK family modification methylase [Bacillus weihenstephanensis KBAB4] gi|163865213|gb|ABY46272.1| modification methylase, HemK family [Bacillus weihenstephanensis KBAB4] Length = 283 Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 77/257 (29%), Positives = 122/257 (47%), Gaps = 11/257 (4%) Query: 11 LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70 LC V + ++++ + Q I ++ I +LG+ FY ++ + Sbjct: 28 LCHVLKTNRTGMLMNMREEITAEQEKSFAEFIHNHVEGIPIQYMLGYEMFYGRSFFVNEE 87 Query: 71 TFEPRPETELLVDSALAFSLPRIEKR---DVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 PRPETE L+ L RIE+ + + I D+GTG+GA+ + L E+ V Sbjct: 88 VLIPRPETEELIVGVLE----RIERHFGNEELHIADIGTGSGAISITLALENKNLHVYTV 143 Query: 128 DISCKALEIAKSNAVTNGVSERF--DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185 DI+ +++E+AK NA T G F L S ++ + + L DV+VSNPPYI L Sbjct: 144 DIAQESIEVAKENAKTLGADVTFYHGDLLSPFYETGQKL-DVVVSNPPYIPEEDWRGLST 202 Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KL 244 V++ +P+ +L GG DGL YR + + L K + + EIG Q DV + + Sbjct: 203 VVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEIGVGQGEDVKALLQQTFPR 262 Query: 245 FLVNAFKDYGGNDRVLL 261 V D G DR++ Sbjct: 263 AQVEVVFDINGKDRMVF 279 >gi|91201017|emb|CAJ74074.1| similar to protein methyltransferase [Candidatus Kuenenia stuttgartiensis] Length = 323 Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 67/233 (28%), Positives = 115/233 (49%), Gaps = 13/233 (5%) Query: 41 AIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR 100 A+ R K + I +F + + PRPETELLV++ + + I + ++V Sbjct: 86 AVQRRAKRVPLQYITNHAEFMSSDFYVDERVLIPRPETELLVEAVIKKAKSFIHENEIV- 144 Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER--------FDT 152 I+D+G G+G + ++L K + +DIS +AL++AK N + + E+ ++ Sbjct: 145 IIDIGVGSGNIAISLAKNISTAGIMAIDISPEALDVAKMNTQKHHLQEKITFLCGNVYEP 204 Query: 153 LQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212 LQS S++ IVSNPPYI S + L EVRD++P +L G GL + I Sbjct: 205 LQS---CSIKTKAHFIVSNPPYIASTELSELQQEVRDYEPYTALISGNSGLEMFERILAE 261 Query: 213 VSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL-VNAFKDYGGNDRVLLFCR 264 + L G +E+ Q V+++ ++ +F + KDY R+++ R Sbjct: 262 ANSWLRPAGFLLLEVAEKQARQVIKMIKNTNIFTSIQRIKDYQNISRIIIAQR 314 >gi|298386834|ref|ZP_06996389.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacteroides sp. 1_1_14] gi|298260508|gb|EFI03377.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacteroides sp. 1_1_14] Length = 278 Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 81/262 (30%), Positives = 124/262 (47%), Gaps = 12/262 (4%) Query: 7 SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66 S C + G+ + + + D +L ++ L N I R K+E I I G+ +F Sbjct: 25 SMLICCDMLGVDALDIYMGKDIILSACKQRELENIIFRLQKNEPIQYIRGYAEFCGRNFR 84 Query: 67 LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126 ++ PRPET LVD + E D R+LD+GTG+G + ++L K+ P K Sbjct: 85 VAPGVLIPRPETAELVDLIVK------ENPDARRLLDIGTGSGCIAISLDKKLPDAKVDA 138 Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS--VEGL-FDVIVSNPPYIESVIVDCL 183 DIS +AL IA+ N + + + D FS+ ++G +D+IVSNPPY+ + Sbjct: 139 WDISEEALAIARKN--NEELDAQVTFCRQDVFSADGIQGTSYDIIVSNPPYVTETEKTEM 196 Query: 184 GLEVRDFDPRISL-DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 V D++P ++L D L YR IA+ L G EI D++R+ E Sbjct: 197 EANVLDWEPELALFVPDEDPLRFYRRIAELGRELLRPGGKLYFEINQAYGQDMIRMIEMN 256 Query: 243 KLFLVNAFKDYGGNDRVLLFCR 264 + V KD G DR+L R Sbjct: 257 QYRDVRVIKDIFGKDRILTANR 278 >gi|86607398|ref|YP_476161.1| HemK family methyltransferase [Synechococcus sp. JA-3-3Ab] gi|86555940|gb|ABD00898.1| methyltransferase, HemK family [Synechococcus sp. JA-3-3Ab] Length = 285 Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 76/240 (31%), Positives = 120/240 (50%), Gaps = 12/240 (5%) Query: 25 DPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDS 84 DP + +++ R LT I + +LG ++ + L ++ PRPETELLV+ Sbjct: 48 DPLAEVEELWRRRLTERI-------PLQYLLGRVEWAGLSLRVTPAVLIPRPETELLVEQ 100 Query: 85 ALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN 144 A + L DLGTG+GA+ +AL + P + + VD+S +AL +A +N Sbjct: 101 A-SLWLQSNLLPPGSPFADLGTGSGAIAIALAQGHPQLQLLAVDVSPEALAVAAANVADY 159 Query: 145 GVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201 + ER LQ WF+ ++ G +VSNPPYI + + L EVR +PR +LDGG D Sbjct: 160 HLQERVKLLQGSWFAPLDPWRGRLRGLVSNPPYIPTGELAYLMPEVRLHEPRQALDGGED 219 Query: 202 GLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF-LVNAFKDYGGNDRVL 260 GL H R + +L + +VE+ Q V ++R + + +D G +RV+ Sbjct: 220 GLVHLRLLIQKAPDYLAPNSFWAVEVMQGQAPWVAEQLQARGGYQQIQVHRDLAGIERVV 279 >gi|229164276|ref|ZP_04292209.1| Protein hemK [Bacillus cereus R309803] gi|228619216|gb|EEK76109.1| Protein hemK [Bacillus cereus R309803] Length = 283 Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 77/264 (29%), Positives = 125/264 (47%), Gaps = 25/264 (9%) Query: 11 LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70 LC V + ++++ + Q T I + ++ I ++G+ FY ++ + Sbjct: 28 LCHVLKTNRTGLLMNMREEITVEQEKSFTEFIHKHVEGIPIQYMMGYEMFYGRSFFVNEE 87 Query: 71 TFEPRPETELLVDSALAFSLPRIEKR---DVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 PRPETE L+ L R+E+ + + D+GTG+GA+ + L E+ V Sbjct: 88 VLIPRPETEELIVGVLE----RVERHFGDKELHVADIGTGSGAISITLALENKNLHVYTV 143 Query: 128 DISCKALEIAKSNAVTNGVSERF--DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185 DI+ +++E+AK NA T G +F L S ++ + + L D++VSNPPYI L Sbjct: 144 DIAQESIEVAKENAKTLGAEVKFYHGDLLSPFYETGQKL-DIVVSNPPYIPEEDWRGLSP 202 Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245 V++ +P+ +L GG DGL YR + + L K + + EIG Q DV K Sbjct: 203 VVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEIGVGQGEDV-------KGL 255 Query: 246 LVNAFK--------DYGGNDRVLL 261 L AF D G DR++ Sbjct: 256 LQQAFPHAHVEVVFDINGKDRMVF 279 >gi|332519660|ref|ZP_08396124.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Lacinutrix algicola 5H-3-7-4] gi|332044219|gb|EGI80413.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Lacinutrix algicola 5H-3-7-4] Length = 291 Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 78/268 (29%), Positives = 133/268 (49%), Gaps = 21/268 (7%) Query: 7 SHSFLC--RVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHES-IHRILGWRDFYNV 63 S F+C ++ Q+ +D D ++ ++ + NA+ LK+E I I+G +FY + Sbjct: 27 SFFFICTENYYNVTRLQLALDSDLAINKEEQTVIFNAL-EDLKNEKPIQYIIGETEFYGL 85 Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 ++ T PRPETE LV L + ++++ + LD+GTG+G + ++L KE + Sbjct: 86 PFKVNKHTLIPRPETEELVTLVLKTAKQKLKESKPLTCLDIGTGSGCIAISLAKELKEAQ 145 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERF----------DTLQSDWFSSVEGLFDVIVSNPP 173 +D+S +A++ AK NAV N V+ F +TL D F+VIVSNPP Sbjct: 146 VYAIDVSTEAIKKAKENAVLNNVAVEFIKCDILNACNETLNKDL------KFNVIVSNPP 199 Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDG-LSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232 Y+ ++ + V + +P ++L D L Y+ IA+ ++ L+K+G EI Sbjct: 200 YVRNLEKAEIKNNVLNNEPHLALFVEDDNPLLFYKAIAEFATKKLHKNGKLFFEINEYLG 259 Query: 233 VDVVRIFESRKLFLVNAFKDYGGNDRVL 260 + + E+ V KD DR+L Sbjct: 260 EETKALVENIGFKNVEIIKDIFNKDRML 287 >gi|154491829|ref|ZP_02031455.1| hypothetical protein PARMER_01450 [Parabacteroides merdae ATCC 43184] gi|154088070|gb|EDN87115.1| hypothetical protein PARMER_01450 [Parabacteroides merdae ATCC 43184] Length = 291 Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 75/257 (29%), Positives = 122/257 (47%), Gaps = 18/257 (7%) Query: 13 RVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTF 72 RV + H + D L + ++ + + + R + E I ILG DFY+++ + Sbjct: 40 RVCNIQPHHFLFCKDKELPESEKSRIHDIVERLKQMEPIQYILGTADFYSLQFEVDPSVL 99 Query: 73 EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCK 132 PRPETE LV+ + L +++ ++ILD+GTG+G + + L K + DIS + Sbjct: 100 IPRPETEELVEQVI---LDNADQK--IKILDIGTGSGCIAVTLRKHLKKASVIATDISAE 154 Query: 133 ALEIAKSNAVTNGVSERFDTLQSDWFSSVEG------LFDVIVSNPPYIESVIVDCLGLE 186 AL A+ NA N + F +Q+D + + DVIVSNPPYI+ + Sbjct: 155 ALATARRNAKRNNTTVTF--IQTDILDPEKAEMDIPFILDVIVSNPPYIKEEEKKDMERN 212 Query: 187 VRDFDPRISL---DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 V D++P ++L D D L +Y IA + L ++G EI VV + E Sbjct: 213 VLDYEPHLALFVPDN--DPLLYYWHIAHFGKKKLRRNGHLYFEINAACGNMVVEMLEEEG 270 Query: 244 LFLVNAFKDYGGNDRVL 260 + +D G DR++ Sbjct: 271 YKNIELIQDLSGKDRII 287 >gi|78485887|ref|YP_391812.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Thiomicrospira crunogena XCL-2] gi|78364173|gb|ABB42138.1| modification methylase, HemK family [Thiomicrospira crunogena XCL-2] Length = 310 Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 66/174 (37%), Positives = 97/174 (55%), Gaps = 7/174 (4%) Query: 60 FYNVRLTLSSDTFEPR-PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118 F ++ +S T PR P EL+ P +E V RILDL TG+G + LA L+ Sbjct: 97 FAGLKFKVSEATLVPRSPIAELIAQE----YRPWVEPESVHRILDLCTGSGCIGLASLQA 152 Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIES 177 P VDIS +ALE+A+ N + + +QSD FS++ G +D+IVSNPPY+++ Sbjct: 153 CPNATVDLVDISPEALEVAQRNIEMYHLDDVATAIQSDLFSALSGRKYDLIVSNPPYVDA 212 Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231 + +D L E +PR+ L+ G DGL R I S +LN++G VE+G +Q Sbjct: 213 IEMDALPEEFHQ-EPRLGLEAGPDGLDLVRRILAEASAYLNEEGTLIVEVGVSQ 265 >gi|229033961|ref|ZP_04188915.1| Protein hemK [Bacillus cereus AH1271] gi|228728387|gb|EEL79409.1| Protein hemK [Bacillus cereus AH1271] Length = 283 Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 76/258 (29%), Positives = 120/258 (46%), Gaps = 13/258 (5%) Query: 11 LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70 LC V + ++++ + Q T I + ++ I ++G+ FY ++ + Sbjct: 28 LCHVLKTNRTGMLMNMREEITVEQETSFTEFIHKHVEGIPIQYMIGYEMFYGRSFFVNEE 87 Query: 71 TFEPRPETELLVDSALAFSLPRIEKR---DVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 PRPETE L+ L RIE+ + + + D+GTG+GA+ + L E+ V Sbjct: 88 VLIPRPETEELIVGVLE----RIERHFGDEKLHVADIGTGSGAISITLALENKNLHVYTV 143 Query: 128 DISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184 DI+ +++E+AK NA T G F D L F DV+VSNPPYI L Sbjct: 144 DIAQESIEVAKENAKTLGAEVTFYHGDLLSP--FHKTGQKLDVVVSNPPYIPEEDWRGLS 201 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-K 243 V++ +P+ +L GG DGL YR + + L K + + EIG Q DV + + Sbjct: 202 PVVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEIGVGQGEDVKELLQQAFP 261 Query: 244 LFLVNAFKDYGGNDRVLL 261 V D G DR++ Sbjct: 262 HAHVEVVFDINGKDRMVF 279 >gi|282897449|ref|ZP_06305451.1| Modification methylase HemK [Raphidiopsis brookii D9] gi|281198101|gb|EFA72995.1| Modification methylase HemK [Raphidiopsis brookii D9] Length = 298 Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 62/178 (34%), Positives = 98/178 (55%), Gaps = 9/178 (5%) Query: 57 WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116 WR+F L +S PRPETE+L+D + + ++ V DLGTG+GA+ L L+ Sbjct: 91 WRNF---TLAVSDAVLIPRPETEILIDLVIESANQDLQSGIWV---DLGTGSGAIALGLV 144 Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF---SSVEGLFDVIVSNPP 173 + K G DIS +AL +A++NA G ++R + Q W+ + ++G +VSNPP Sbjct: 145 EVLTNAKIYGTDISEQALAVARTNARNLGFTQRVEFHQGCWWEPLNHLKGKISGMVSNPP 204 Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231 YI S ++ L EV +P ++LDGG+DGL R + + +L G+ +E+ Q Sbjct: 205 YIPSDLIGTLEPEVVKHEPHLALDGGVDGLEAIRYLVEVSPHYLLPGGVWLIEMMAGQ 262 >gi|324329277|gb|ADY24537.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Bacillus thuringiensis serovar finitimus YBT-020] Length = 283 Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 79/264 (29%), Positives = 124/264 (46%), Gaps = 25/264 (9%) Query: 11 LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70 LC V + ++++ + Q T I + ++ I ++G FY ++ + Sbjct: 28 LCHVLKTNRTGLLMNMREEITAEQEKSFTEFIHKHVEGIPIQYMIGHEMFYGRSFFVNEE 87 Query: 71 TFEPRPETELLVDSALAFSLPRIEKR---DVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 PRPETE L+ L RIE+ + + + D+GTG+GA+ + L E+ V Sbjct: 88 VLIPRPETEELIVGVLE----RIERHFGDEKIHVADIGTGSGAISITLALENKNLHVYTV 143 Query: 128 DISCKALEIAKSNAVTNGVSERF--DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185 DI+ +++E+AK NA T G F L S ++ + + L DV+VSNPPYI L Sbjct: 144 DIAQESIEVAKENAKTLGAEVTFYHGDLLSPFYETGQKL-DVVVSNPPYIPEEDWRGLSP 202 Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245 V++ +P+ +L GG DGL YR + + L K + + EIG Q DV K Sbjct: 203 VVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEIGVGQGEDV-------KGL 255 Query: 246 LVNAFK--------DYGGNDRVLL 261 L AF D G DR++ Sbjct: 256 LQQAFPHAHVEVVFDINGKDRMVF 279 >gi|300117842|ref|ZP_07055609.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacillus cereus SJ1] gi|298724706|gb|EFI65381.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacillus cereus SJ1] Length = 283 Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 79/264 (29%), Positives = 124/264 (46%), Gaps = 25/264 (9%) Query: 11 LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70 LC V + ++++ + Q T I + ++ I ++G FY ++ + Sbjct: 28 LCHVLKTNRTGLLMNMREEITAEQETSFTEFIHKHVEGIPIQYMIGHEMFYGRSFIVNEE 87 Query: 71 TFEPRPETELLVDSALAFSLPRIEKR---DVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 PRPETE L+ L RIE+ + + + D+GTG+GA+ + L E+ V Sbjct: 88 VLIPRPETEELIVGVLE----RIERHFDDEKLHVADIGTGSGAISITLALENKNLHVYTV 143 Query: 128 DISCKALEIAKSNAVTNGVSERF--DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185 DI+ +++E+AK NA T G F L S ++ + + L DV+VSNPPYI L Sbjct: 144 DIAQESIEVAKENAKTLGAEVTFYHGDLLSPFYETGQKL-DVVVSNPPYIPEEDWRGLSP 202 Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245 V++ +P+ +L GG DGL YR + + L K + + EIG Q DV K Sbjct: 203 VVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEIGVGQGEDV-------KGL 255 Query: 246 LVNAFK--------DYGGNDRVLL 261 L AF D G DR++ Sbjct: 256 LQQAFPHAHVEVVFDINGKDRMVF 279 >gi|224025263|ref|ZP_03643629.1| hypothetical protein BACCOPRO_02000 [Bacteroides coprophilus DSM 18228] gi|224018499|gb|EEF76497.1| hypothetical protein BACCOPRO_02000 [Bacteroides coprophilus DSM 18228] Length = 279 Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 81/240 (33%), Positives = 114/240 (47%), Gaps = 14/240 (5%) Query: 25 DPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDS 84 D D D+R R L N + R +E + I+G F + ++ PRPETE LV S Sbjct: 45 DTDFPTDERAR--LNNILTRLKSYEPLQYIIGETRFSGLPFEVTPSVLIPRPETEELV-S 101 Query: 85 ALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN 144 + P + VRILD+GTG+G + ++L P D+S +ALE+A+ NA+ N Sbjct: 102 WIVEDHPDVP----VRILDIGTGSGCIPVSLAHRLPLSTVHAWDVSPEALEVARRNAIRN 157 Query: 145 GVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL-DGGI 200 GV+ F D LQ W S DV+VSNPPYI + V D++P ++L Sbjct: 158 GVTVHFQQVDALQESWPSLN---IDVLVSNPPYITEKERTDMERNVLDWEPELALFVPDN 214 Query: 201 DGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 D L YR IA L+ G EI + V + + V KD GNDR++ Sbjct: 215 DPLLFYRHIARIGLDLLSPSGTLYYEINRAYGAETVSLLQQLGYHSVELRKDLSGNDRMV 274 >gi|319936942|ref|ZP_08011352.1| modification methylase [Coprobacillus sp. 29_1] gi|319807878|gb|EFW04457.1| modification methylase [Coprobacillus sp. 29_1] Length = 284 Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 79/251 (31%), Positives = 119/251 (47%), Gaps = 14/251 (5%) Query: 18 SSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPE 77 HQ+ + D ++D I R + E I I G F++ ++ D PR E Sbjct: 35 EPHQLYLMMDEEVEDELYQAFQAGIKRYMDGEPIQYIKGKETFFSRDFIVNEDVLIPRYE 94 Query: 78 TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137 TE LV++ L E + + + D+GTG+GA+ ++L E V DIS +ALE+A Sbjct: 95 TEELVENILYKIDDYFEDYESIDLCDVGTGSGAIAISLALEESKLNVVATDISKEALEVA 154 Query: 138 KSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194 + NA G + F Q D + E D+ VSNPPYI V D + V+D +P + Sbjct: 155 RLNAQELGANIEF--YQGDMLEPLIDREMKVDIFVSNPPYI-PVEQDIESV-VKDNEPHV 210 Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN----AF 250 +L GG DGL YR I V + L + E+G++Q+ + + E + N Sbjct: 211 ALFGGNDGLYFYRKIFSKVQSVIKDRALLAFEMGFDQRELMCQAVEH---YFPNIPYEII 267 Query: 251 KDYGGNDRVLL 261 KD G DR+L Sbjct: 268 KDINGKDRMLF 278 >gi|332705342|ref|ZP_08425420.1| HemK family putative methylase [Lyngbya majuscula 3L] gi|332355702|gb|EGJ35164.1| HemK family putative methylase [Lyngbya majuscula 3L] Length = 315 Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 70/213 (32%), Positives = 103/213 (48%), Gaps = 8/213 (3%) Query: 57 WRDFYNVRLTLSSDTFEPRPETELLVDSAL-AFSLPRIEKRDVVRILDLGTGTGAVCLAL 115 WR F L +S PRPETE L+D A+ ++ DLGTG+GA+ L Sbjct: 102 WRHF---SLRVSPAVLIPRPETESLIDLAVNGVAMSSTPDLSSGHWADLGTGSGAIACGL 158 Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL---FDVIVSNP 172 + P VD + +AL IA+ NA G++E+ W+S +E L +V+NP Sbjct: 159 AEVFPHGTIHAVDCTEEALAIAQLNAQQLGMAEKIKFYHGYWYSPLEALKGQLSGMVANP 218 Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232 PYI S + L E+ +P I+LDGG DGL R + D +L G+ +E+ Q Sbjct: 219 PYIPSNSLKQLQPEIYYHEPHIALDGGRDGLDCIRQLIDMSGDYLRPGGVWLIEMMAGQA 278 Query: 233 VDVVRIFESRKLFL-VNAFKDYGGNDRVLLFCR 264 VV++ ++ + + F D G DR L R Sbjct: 279 DKVVQLLQNHGSYSEIQIFPDLAGIDRFALAYR 311 >gi|78185424|ref|YP_377859.1| modification methylase HemK [Synechococcus sp. CC9902] gi|78169718|gb|ABB26815.1| Modification methylase HemK [Synechococcus sp. CC9902] Length = 302 Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 68/218 (31%), Positives = 110/218 (50%), Gaps = 10/218 (4%) Query: 44 RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103 RS+ + + + WRD + +SS PR ETELLVD AL+F+ R + D Sbjct: 80 RSMPLQYLVGVCPWRDLL---IEVSSAALIPRQETELLVDLALSFAGGRPPRSWA----D 132 Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE- 162 LGTG+GA+ ++L + P +G VD+S AL +A+ N + W+ ++ Sbjct: 133 LGTGSGAIAVSLCRAWPEAEGHAVDLSVDALALAEKNLKALAPQQSCRLHHGSWWLPLQA 192 Query: 163 --GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220 G +++VSNPPYI S ++ L VR+ +P ++L G DGL R++ R L Sbjct: 193 FWGQLEIVVSNPPYIPSPLLGELDPVVREHEPHVALLAGEDGLEAIRSLLMDAPRALAPG 252 Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258 G+ +E ++Q +V + + L V++ D G R Sbjct: 253 GVLFLEHHHDQSENVQDLMRAAGLVNVSSANDLEGIAR 290 >gi|301308352|ref|ZP_07214306.1| putative protein-(glutamine-N5) methyltransferase, release factor-specific [Bacteroides sp. 20_3] gi|300833822|gb|EFK64438.1| putative protein-(glutamine-N5) methyltransferase, release factor-specific [Bacteroides sp. 20_3] Length = 318 Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 85/290 (29%), Positives = 127/290 (43%), Gaps = 48/290 (16%) Query: 13 RVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSDT 71 RV GLS+HQ+++ L D ++F + IV L+ ++ I +LG DFY + ++ D Sbjct: 31 RVCGLSTHQLLLGKGKELSDTEKFKIKE-IVEGLRLYKPIQYLLGIADFYGIEFKVTPDV 89 Query: 72 FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131 PRPET LV+ + + RILD+GTG+G + ++L K P + VDIS Sbjct: 90 LIPRPETAELVERIITDY-----RGQAPRILDIGTGSGCIAISLAKHLPKAEVAAVDISP 144 Query: 132 KALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGL------------------------ 164 +AL +A+ NA N VS F D L + S ++G Sbjct: 145 EALAVAEENARLNQVSVSFLELDILSEGYPSFMQGKLKFHVEETKVSRKENKSFTYMKPK 204 Query: 165 -------------FDVIVSNPPYIESVIVDCLGLEVRDFDPRISL-DGGIDGLSHYRTIA 210 F+ IVSNPPYI + + V + +P ++L D L YR IA Sbjct: 205 SHTEETAVSPIGNFNCIVSNPPYIMNKEKATMEANVLENEPHLALFVPDDDPLLFYRAIA 264 Query: 211 DGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 RHL + G EI + V + V +D G DR++ Sbjct: 265 RFGQRHLVEGGHLYFEINALCGKETVAMLRQENYTEVELIQDLYGKDRIV 314 >gi|228917937|ref|ZP_04081473.1| Protein hemK [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228841734|gb|EEM86845.1| Protein hemK [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 283 Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 79/264 (29%), Positives = 124/264 (46%), Gaps = 25/264 (9%) Query: 11 LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70 LC V + ++++ + Q T I + ++ I ++G FY ++ + Sbjct: 28 LCHVLKTNRTGLLMNMREEITAEQETSFTEFIHKHVEGIPIQYMIGHEMFYGRSFFVNEE 87 Query: 71 TFEPRPETELLVDSALAFSLPRIEKR---DVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 PRPETE L+ L RIE+ + + + D+GTG+GA+ + L E+ V Sbjct: 88 VLIPRPETEELIVGVLD----RIERHFGDEKLHVADIGTGSGAISITLALENKNLHVYTV 143 Query: 128 DISCKALEIAKSNAVTNGVSERF--DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185 DI+ +++E+AK NA T G F L S ++ + + L DV+VSNPPYI L Sbjct: 144 DIAQESIEVAKENAKTLGAEVTFYHGDLLSPFYETGQKL-DVVVSNPPYIPEEDWRALSP 202 Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245 V++ +P+ +L GG DGL YR + + L K + + EIG Q DV K Sbjct: 203 VVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEIGVGQGEDV-------KGL 255 Query: 246 LVNAFK--------DYGGNDRVLL 261 L AF D G DR++ Sbjct: 256 LQQAFPHAHVEVVFDINGKDRMVF 279 >gi|229076543|ref|ZP_04209503.1| Protein hemK [Bacillus cereus Rock4-18] gi|228706576|gb|EEL58789.1| Protein hemK [Bacillus cereus Rock4-18] Length = 283 Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 73/255 (28%), Positives = 120/255 (47%), Gaps = 7/255 (2%) Query: 11 LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70 LC V + ++++ + Q I + ++ I +LG+ FY ++ + Sbjct: 28 LCHVLKTNRTGMLMNMREEITAEQEKSFAEFIHKHVEGIPIQYMLGYEMFYGRSFFVNEE 87 Query: 71 TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130 PRPETE L+ L + R+ + + + D+GTG+GA+ + L E+ VDI+ Sbjct: 88 VLIPRPETEELIVGVLE-RIERLFGNEKLHVADIGTGSGAISITLALENKNLHVYTVDIA 146 Query: 131 CKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEV 187 +++E+AK NA + G F D L F ++ DV+VSNPPYI L V Sbjct: 147 RESIEVAKENAKSLGAEVTFYHGDLLSP--FYKIDQKLDVVVSNPPYIPEEDWRGLSPVV 204 Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFL 246 ++ +P+ +L GG DGL YR + + L K + + EIG Q DV + + Sbjct: 205 KEHEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEIGVGQGEDVKELLQQAFPHAH 264 Query: 247 VNAFKDYGGNDRVLL 261 V D G DR++ Sbjct: 265 VEVVFDINGKDRMVF 279 >gi|172058703|ref|YP_001815163.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Exiguobacterium sibiricum 255-15] gi|171991224|gb|ACB62146.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Exiguobacterium sibiricum 255-15] Length = 282 Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 79/242 (32%), Positives = 119/242 (49%), Gaps = 18/242 (7%) Query: 30 LDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFS 89 L+ Q + ++ L + ++G++ FY +S PRPETE L++ F Sbjct: 47 LEPEQDLLFSEYLLAHLNGVPVQHLIGYQPFYGRNFRVSPAVLIPRPETEELIE----FV 102 Query: 90 LPRIEKRDVV--RILDLGTGTGAVCLALLKE--SPFFKGVGVDISCKALEIAKSNAVTNG 145 R++ I+D+GTG+GA+CL L E P VDIS +A+ +AK N T G Sbjct: 103 TGRLQGETFQPGEIVDIGTGSGAICLTLALELGQPV---TTVDISPEAIAVAKENQQTLG 159 Query: 146 VSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204 F L+ D + + + V+VSNPPYIE + L V D +P ++L GG DGL Sbjct: 160 GEVTF--LEGDLLAPLADHSVRVLVSNPPYIEE--DELLSDVVFDHEPHLALFGGKDGLV 215 Query: 205 HYRTIADGVSRHLNKD-GLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDYGGNDRVLLF 262 YR + + +R L D L + EIG+NQ +V + + R KD G DR++ Sbjct: 216 FYRRLLEDSARVLRDDFRLIAFEIGHNQGQEVQMMLKKRYPTVETGILKDINGKDRIVYA 275 Query: 263 CR 264 R Sbjct: 276 ER 277 >gi|229118824|ref|ZP_04248173.1| Protein hemK [Bacillus cereus Rock1-3] gi|228664625|gb|EEL20118.1| Protein hemK [Bacillus cereus Rock1-3] Length = 283 Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 75/258 (29%), Positives = 121/258 (46%), Gaps = 13/258 (5%) Query: 11 LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70 LC V + ++++ + Q I + ++ I +LG+ FY ++ + Sbjct: 28 LCHVLKTNRTGMLMNMREEITAEQEKSFAEFIHKHVEGIPIQYMLGYEMFYGRSFFVNEE 87 Query: 71 TFEPRPETELLVDSALAFSLPRIEKR---DVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 PRPETE L+ L RIE+ + + + D+GTG+GA+ + L E+ V Sbjct: 88 VLIPRPETEELIVGVLE----RIERHFGNEKLHVADIGTGSGAISITLALENKNLHVYTV 143 Query: 128 DISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184 DI+ +++E+AK NA + G F D L F ++ DV+VSNPPYI L Sbjct: 144 DIARESIEVAKENAKSLGAEVTFYHGDLLSP--FYKIDQKLDVVVSNPPYIPEEDWRGLS 201 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-K 243 V++ +P+ +L GG DGL YR + + L K + + EIG Q DV + + Sbjct: 202 PVVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEIGVGQGEDVKELLQQAFP 261 Query: 244 LFLVNAFKDYGGNDRVLL 261 V D G DR++ Sbjct: 262 HAHVEVVFDINGKDRMVF 279 >gi|229014498|ref|ZP_04171616.1| Protein hemK [Bacillus mycoides DSM 2048] gi|228746848|gb|EEL96733.1| Protein hemK [Bacillus mycoides DSM 2048] Length = 283 Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 76/257 (29%), Positives = 122/257 (47%), Gaps = 11/257 (4%) Query: 11 LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70 LC V + ++++ + Q I + ++ I +LG+ FY ++ + Sbjct: 28 LCHVLKTNRTGMLMNMREEITAEQEKSFAQFIHKHVEGIPIQYMLGYEMFYGRSFFVNEE 87 Query: 71 TFEPRPETELLVDSALAFSLPRIEKR---DVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 PRPETE L+ L RIE+ + + I D+GTG+GA+ + L E+ V Sbjct: 88 VLIPRPETEELIVGVLE----RIERHFGNEELHIADIGTGSGAISITLALENKNLHVYTV 143 Query: 128 DISCKALEIAKSNAVTNGVSERF--DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185 DI+ +++E+AK NA T G F L S ++ + + L DV+VSNPPYI L Sbjct: 144 DIAQESIEVAKENAKTLGADVTFYHGDLLSPFYETGQKL-DVVVSNPPYIPEEDWRGLST 202 Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KL 244 V++ +P+ +L GG DGL YR + + L + + EIG Q DV + + Sbjct: 203 VVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQNKAIVAFEIGVGQGEDVKALLQQTFPR 262 Query: 245 FLVNAFKDYGGNDRVLL 261 V D G DR++ Sbjct: 263 AQVEVVFDINGKDRMVF 279 >gi|30265351|ref|NP_847728.1| HemK family modification methylase [Bacillus anthracis str. Ames] gi|47530890|ref|YP_022239.1| HemK family modification methylase [Bacillus anthracis str. 'Ames Ancestor'] gi|49188163|ref|YP_031416.1| HemK family modification methylase [Bacillus anthracis str. Sterne] gi|165871296|ref|ZP_02215945.1| modification methylase, HemK family [Bacillus anthracis str. A0488] gi|167636691|ref|ZP_02394979.1| modification methylase, HemK family [Bacillus anthracis str. A0442] gi|170688140|ref|ZP_02879351.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacillus anthracis str. A0465] gi|170709377|ref|ZP_02899790.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacillus anthracis str. A0389] gi|177651883|ref|ZP_02934466.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacillus anthracis str. A0174] gi|196042385|ref|ZP_03109650.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacillus cereus NVH0597-99] gi|227818091|ref|YP_002818100.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacillus anthracis str. CDC 684] gi|228930336|ref|ZP_04093340.1| Protein hemK [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228936613|ref|ZP_04099407.1| Protein hemK [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|229094440|ref|ZP_04225512.1| Protein hemK [Bacillus cereus Rock3-42] gi|229602075|ref|YP_002869543.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacillus anthracis str. A0248] gi|254686249|ref|ZP_05150108.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacillus anthracis str. CNEVA-9066] gi|254724244|ref|ZP_05186028.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacillus anthracis str. A1055] gi|254735256|ref|ZP_05192965.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacillus anthracis str. Western North America USA6153] gi|254744459|ref|ZP_05202139.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacillus anthracis str. Kruger B] gi|254755797|ref|ZP_05207829.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacillus anthracis str. Vollum] gi|254762137|ref|ZP_05213983.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacillus anthracis str. Australia 94] gi|301056796|ref|YP_003795007.1| HemK family modification methylase [Bacillus anthracis CI] gi|30260029|gb|AAP29214.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacillus anthracis str. Ames] gi|47506038|gb|AAT34714.1| modification methylase, HemK family [Bacillus anthracis str. 'Ames Ancestor'] gi|49182090|gb|AAT57466.1| modification methylase, HemK family [Bacillus anthracis str. Sterne] gi|164712963|gb|EDR18491.1| modification methylase, HemK family [Bacillus anthracis str. A0488] gi|167527891|gb|EDR90713.1| modification methylase, HemK family [Bacillus anthracis str. A0442] gi|170125725|gb|EDS94639.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacillus anthracis str. A0389] gi|170667833|gb|EDT18585.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacillus anthracis str. A0465] gi|172082587|gb|EDT67651.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacillus anthracis str. A0174] gi|196026777|gb|EDX65419.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacillus cereus NVH0597-99] gi|227005279|gb|ACP15022.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacillus anthracis str. CDC 684] gi|228688977|gb|EEL42804.1| Protein hemK [Bacillus cereus Rock3-42] gi|228823048|gb|EEM68886.1| Protein hemK [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228829322|gb|EEM74955.1| Protein hemK [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|229266483|gb|ACQ48120.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacillus anthracis str. A0248] gi|300378965|gb|ADK07869.1| modification methylase, HemK family [Bacillus cereus biovar anthracis str. CI] Length = 283 Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 79/264 (29%), Positives = 124/264 (46%), Gaps = 25/264 (9%) Query: 11 LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70 LC V + ++++ + Q T I + ++ I ++G FY ++ + Sbjct: 28 LCHVLKTNRTGLLMNMREEITAEQETSFTEFIHKHVEGIPIQYMIGHEMFYGRSFFVNEE 87 Query: 71 TFEPRPETELLVDSALAFSLPRIEKR---DVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 PRPETE L+ L RIE+ + + + D+GTG+GA+ + L E+ V Sbjct: 88 VLIPRPETEELIVGVLE----RIERHFGDEKLHVADIGTGSGAISITLALENKNLHVYTV 143 Query: 128 DISCKALEIAKSNAVTNGVSERF--DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185 DI+ +++E+AK NA T G F L S ++ + + L DV+VSNPPYI L Sbjct: 144 DIAQESIEVAKENAKTLGAEVTFYHGDLLSPFYETGQKL-DVVVSNPPYIPEEDWRGLSP 202 Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245 V++ +P+ +L GG DGL YR + + L K + + EIG Q DV K Sbjct: 203 VVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEIGVGQGEDV-------KGL 255 Query: 246 LVNAFK--------DYGGNDRVLL 261 L AF D G DR++ Sbjct: 256 LQQAFPHAHVEVVFDINGKDRMVF 279 >gi|254796528|ref|YP_003081364.1| modification methylase, HemK family [Neorickettsia risticii str. Illinois] gi|254589765|gb|ACT69127.1| modification methylase, HemK family [Neorickettsia risticii str. Illinois] Length = 289 Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 76/261 (29%), Positives = 133/261 (50%), Gaps = 12/261 (4%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L V L+ Q+I+ + + Q ++ K S+ I+G ++F+ Sbjct: 36 DAELLLAHVLSLNREQLILYCNEGMTKSQATDFA-MLLELRKSHSVAAIVGEKEFWKYSF 94 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEK-RDVVRILDLGTGTGAVCLALLKESPFFKG 124 ++ D PRP+TE ++ + L+ R +K ++I++LGTG+G V +++LKE G Sbjct: 95 AVNKDVLIPRPDTETMLIALLS----RYKKLTQPLKIVELGTGSGCVIISILKEFRNALG 150 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL---FDVIVSNPPYIESVIVD 181 G + S A + N + G+ R + D+ S++ L DVIVSNPPYI + Sbjct: 151 FGFEKSKAAFYLTMRNMLKYGLRARLKLYRLDFDSAMRVLSCKVDVIVSNPPYIRRGEIP 210 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 L EV++ +PRI+LDGG +G+ Y +I S+ L G +EIG + + +V Sbjct: 211 YLQQEVQN-EPRIALDGGFNGILPYFSILKLASKILRPGGEIFLEIGNSWRDSIVSANCP 269 Query: 242 RKLFLVNAFKDYGGNDRVLLF 262 K ++ ++D G +R+L+ Sbjct: 270 FK--IIERYRDLSGTERILVL 288 >gi|29349137|ref|NP_812640.1| putative protoporphyrinogen oxidase [Bacteroides thetaiotaomicron VPI-5482] gi|253571300|ref|ZP_04848707.1| conserved hypothetical protein [Bacteroides sp. 1_1_6] gi|29341045|gb|AAO78834.1| putative protoporphyrinogen oxidase [Bacteroides thetaiotaomicron VPI-5482] gi|251839253|gb|EES67337.1| conserved hypothetical protein [Bacteroides sp. 1_1_6] Length = 278 Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 80/257 (31%), Positives = 122/257 (47%), Gaps = 12/257 (4%) Query: 12 CRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDT 71 C + G+ + + + D +L ++ L N I R K+E I I G+ +F ++ Sbjct: 30 CDMLGVDALDIYMGKDIILSACKQRELENIIFRLQKNEPIQYIRGYAEFCGRNFRVAPGV 89 Query: 72 FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131 PRPET LVD + E D R+LD+GTG+G + ++L K P K DIS Sbjct: 90 LIPRPETAELVDLIVK------ENPDARRLLDIGTGSGCIAISLDKNLPDAKVDAWDISE 143 Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFSS--VEGL-FDVIVSNPPYIESVIVDCLGLEVR 188 +AL IA+ N + + + D FS+ ++G +D+IVSNPPY+ + V Sbjct: 144 EALAIARKN--NEELDAQVTFRRQDVFSADGIQGTSYDIIVSNPPYVTETEKTEMEANVL 201 Query: 189 DFDPRISL-DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLV 247 D++P ++L D L YR IA+ L G EI D++R+ E + V Sbjct: 202 DWEPELALFVPDEDPLRFYRRIAELGRELLRPGGKLYFEINQAYGQDMIRMIEMNQYRDV 261 Query: 248 NAFKDYGGNDRVLLFCR 264 KD G DR+L R Sbjct: 262 RVIKDIFGKDRILTANR 278 >gi|229136147|ref|ZP_04264900.1| Protein hemK [Bacillus cereus BDRD-ST196] gi|228647306|gb|EEL03388.1| Protein hemK [Bacillus cereus BDRD-ST196] Length = 283 Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 76/257 (29%), Positives = 122/257 (47%), Gaps = 11/257 (4%) Query: 11 LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70 LC V + ++++ + Q I + ++ I +LG+ FY ++ + Sbjct: 28 LCHVLKTNRTGMLMNMREEITAEQEESFAEFIHKHVEGIPIQYMLGYEMFYGRSFFVNEE 87 Query: 71 TFEPRPETELLVDSALAFSLPRIEKR---DVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 PRPETE L+ L RIE+ + + I D+GTG+GA+ + L E+ V Sbjct: 88 VLIPRPETEELIVGVLE----RIERHFGNEELHIADIGTGSGAISITLALENKNLHVYTV 143 Query: 128 DISCKALEIAKSNAVTNGVSERF--DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185 DI+ +++E+AK NA T G F L S ++ + + L DV+VSNPPYI L Sbjct: 144 DIAQESIEVAKENAKTLGADVTFYHGDLLSPFYETGQKL-DVVVSNPPYIPEEDWRGLST 202 Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KL 244 V++ +P+ +L GG DGL YR + + L + + EIG Q DV + + Sbjct: 203 VVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQNKAIVAFEIGVGQGEDVKALLQQTFPR 262 Query: 245 FLVNAFKDYGGNDRVLL 261 V D G DR++ Sbjct: 263 AQVEVVFDINGKDRMVF 279 >gi|49476827|ref|YP_039321.1| HemK family modification methylase [Bacillus thuringiensis serovar konkukian str. 97-27] gi|49328383|gb|AAT59029.1| modification methylase, HemK family [Bacillus thuringiensis serovar konkukian str. 97-27] Length = 283 Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 79/264 (29%), Positives = 124/264 (46%), Gaps = 25/264 (9%) Query: 11 LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70 LC V + ++++ + Q T I + ++ I ++G FY ++ + Sbjct: 28 LCHVLKTNRTGLLMNMREEITAEQETSFTEFIHKHVEGIPIQYMIGHEMFYGRSFIVNEE 87 Query: 71 TFEPRPETELLVDSALAFSLPRIEKR---DVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 PRPETE L+ L RIE+ + + + D+GTG+GA+ + L E+ V Sbjct: 88 VLIPRPETEELIVGVLE----RIERHFGDEKLHVADIGTGSGAISITLALENKDLHVYTV 143 Query: 128 DISCKALEIAKSNAVTNGVSERF--DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185 DI+ +++E+AK NA T G F L S ++ + + L DV+VSNPPYI L Sbjct: 144 DIAQESIEVAKENAKTLGAEVTFYHGDLLSPFYETGQKL-DVVVSNPPYIPEEDWRGLSP 202 Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245 V++ +P+ +L GG DGL YR + + L K + + EIG Q DV K Sbjct: 203 VVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEIGVGQGEDV-------KGL 255 Query: 246 LVNAFK--------DYGGNDRVLL 261 L AF D G DR++ Sbjct: 256 LQQAFPHAHVEVVFDINGKDRMVF 279 >gi|305667254|ref|YP_003863541.1| protoporphyrinogen oxidase [Maribacter sp. HTCC2170] gi|88708188|gb|EAR00426.1| protoporphyrinogen oxidase [Maribacter sp. HTCC2170] Length = 481 Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 82/249 (32%), Positives = 123/249 (49%), Gaps = 27/249 (10%) Query: 24 VDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVD 83 + P ++ + L A+ + I ILG F N+ ++ + PRPETE LV Sbjct: 44 LQPSLIIKKEEEQPLFEALSQLKLERPIQYILGLTQFMNLEFKVNENVLIPRPETEDLV- 102 Query: 84 SALAFSLPRIEK-RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142 + + +E + + ILD+GTG+G + ++L K P K +DIS KALE+AK NA+ Sbjct: 103 ---RWIVSDLEHGKSEINILDIGTGSGCIAVSLAKLLPNSKVYALDISNKALEVAKKNAI 159 Query: 143 TNGVSERFDTLQSDWFS--SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL---D 197 N V F LQ+D + + FDVIVSNPPY+ + + V D +P ++L D Sbjct: 160 LNQVEVEF--LQADVLTLKELHLKFDVIVSNPPYVRMLEKTEMNKNVLDNEPELALFVED 217 Query: 198 GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAF------K 251 D L YR I D +L+++G E+ NQ + E K L + F K Sbjct: 218 N--DALVFYRKIVDFAKENLDQNGSLYFEV--NQYMG-----EETKSLLKSYFSEVELRK 268 Query: 252 DYGGNDRVL 260 D GN+R+L Sbjct: 269 DIFGNNRML 277 >gi|228988554|ref|ZP_04148641.1| Protein hemK [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228771171|gb|EEM19650.1| Protein hemK [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 283 Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 79/264 (29%), Positives = 123/264 (46%), Gaps = 25/264 (9%) Query: 11 LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70 LC V + ++++ + Q I + ++ I ++G FY ++ + Sbjct: 28 LCHVLKTNRTGLLMNMREEITAEQEKSFAEFIHKHVEGIPIQYMIGHEMFYGRSFFVNEE 87 Query: 71 TFEPRPETELLVDSALAFSLPRIEKR---DVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 PRPETE L+ L RIE+ + + + D+GTG+GA+ + L E+ V Sbjct: 88 VLIPRPETEELIVGVLE----RIERHFGDEKLHVADIGTGSGAISITLALENKNLHVYTV 143 Query: 128 DISCKALEIAKSNAVTNGVSERF--DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185 DI+ +++E+AK NA T G F L S ++ + + L DV+VSNPPYI L Sbjct: 144 DIAQESIEVAKENAKTLGAEVTFYHGDLLSPFYETSQKL-DVVVSNPPYIPEEDWRGLSP 202 Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245 V++ +P+ +L GG DGL YR D + L K + + EIG Q DV K Sbjct: 203 VVKEHEPKRALVGGEDGLDFYRRFMDELPNVLQKKAIVAFEIGVGQGEDV-------KGL 255 Query: 246 LVNAFK--------DYGGNDRVLL 261 L AF D G DR++ Sbjct: 256 LQQAFPHAHVEVVFDINGKDRMVF 279 >gi|332885937|gb|EGK06181.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Dysgonomonas mossii DSM 22836] Length = 296 Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 78/251 (31%), Positives = 123/251 (49%), Gaps = 11/251 (4%) Query: 13 RVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTF 72 +T S Q ++ + L + Q L + + R E I I+G +F+ + ++ D Sbjct: 48 HITKRSYPQAVIS-GTKLTEEQTILLHSILDRLKTFEPIQYIIGETEFFGLPFHVTKDVL 106 Query: 73 EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCK 132 PRPETE LV+ L + K+ +++LD+GTG+GA+ +AL K DIS + Sbjct: 107 IPRPETEELVELILNEN-----KKSGLKVLDIGTGSGAIAIALAKHLEKADIEAWDISEE 161 Query: 133 ALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDP 192 AL+IA N+ +N V+ F + + FD+IVSNPPYI + V D++P Sbjct: 162 ALKIATLNSDSNAVNIIFRNVDVLKNYPTDTKFDIIVSNPPYILEKEKSGMDQNVLDYEP 221 Query: 193 RISL---DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249 +L D +GL Y IAD L +G EI + D V++ +S+ V Sbjct: 222 HTALFVPDN--NGLLFYDRIADIALDLLEPNGKLYFEINQRKGEDTVQLVKSKGFINVCL 279 Query: 250 FKDYGGNDRVL 260 F+D NDR++ Sbjct: 280 FQDLNKNDRMV 290 >gi|298369665|ref|ZP_06980982.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Neisseria sp. oral taxon 014 str. F0314] gi|298282222|gb|EFI23710.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Neisseria sp. oral taxon 014 str. F0314] Length = 274 Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 81/260 (31%), Positives = 118/260 (45%), Gaps = 13/260 (5%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 ++ L R G + Q++ S + + R ++ E + ILG R+FY Sbjct: 17 EARMLLQRALGCTRVQLLTQGGSEMSEHAAATAQELAHRRIQGEPMAYILGEREFYGRMF 76 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 ++ D PRPETE LV++ L P+ R+ DLGTG+GAV +++ E P + Sbjct: 77 RVNPDVLIPRPETEHLVEAVLDRLPPQ------GRVWDLGTGSGAVAVSIALERPDARVR 130 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWF----SSVEGLFDVIVSNPPYIESVIVD 181 DIS AL A NA G F WF S + +D+IVSNPPYIE+ Sbjct: 131 ASDISAAALHTAAQNAAALGADIEFAL--GSWFDTDRPSEKKSYDIIVSNPPYIEAGDAH 188 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 ++R F+P+ +L DGLS R +A G +L G +E G Q V + Sbjct: 189 LEQGDLR-FEPQGALTDFSDGLSCIRALAAGSPAYLKNGGWLLLEHGCGQGAQVRAVLAE 247 Query: 242 RKLFLVNAFKDYGGNDRVLL 261 ++ D G DRV L Sbjct: 248 HGFSRIDTLPDLAGLDRVTL 267 >gi|282900758|ref|ZP_06308700.1| Modification methylase HemK [Cylindrospermopsis raciborskii CS-505] gi|281194558|gb|EFA69513.1| Modification methylase HemK [Cylindrospermopsis raciborskii CS-505] Length = 297 Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 61/178 (34%), Positives = 97/178 (54%), Gaps = 9/178 (5%) Query: 57 WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116 WR F L +S PRPETE+L+D + + ++ V DLGTG+GA+ L L Sbjct: 90 WRKF---TLAVSDAVLIPRPETEILIDLVMEAANQDLQSGIWV---DLGTGSGAIALGLA 143 Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF---SSVEGLFDVIVSNPP 173 + K +DIS +AL +A++NA G ++R + Q W+ + ++G +VSNPP Sbjct: 144 EVLTNAKIYAIDISEQALAVARTNARNLGFTQRVEFHQGCWWEPLNHLQGKISGMVSNPP 203 Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231 YI S ++ L EV + +P ++LDGG+DGL R + + +L G+ +E+ Q Sbjct: 204 YIPSDMIGTLEPEVVEHEPHLALDGGVDGLEAIRYLVEVSPHYLLPGGVWLIEMMAGQ 261 >gi|229170036|ref|ZP_04297728.1| Protein hemK [Bacillus cereus AH621] gi|228613461|gb|EEK70594.1| Protein hemK [Bacillus cereus AH621] Length = 283 Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 76/257 (29%), Positives = 122/257 (47%), Gaps = 11/257 (4%) Query: 11 LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70 LC V + ++++ + Q I + ++ I +LG+ FY ++ + Sbjct: 28 LCHVLKTNRTGMLMNMREEITAEQEKSFEEFIHKHVEGIPIQYMLGYEMFYGRSFFVNEE 87 Query: 71 TFEPRPETELLVDSALAFSLPRIEKR---DVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 PRPETE L+ L RIE+ + + I D+GTG+GA+ + L E+ V Sbjct: 88 VLIPRPETEELIVGVLE----RIERHFGNEELHIADIGTGSGAISITLALENKNLHVYTV 143 Query: 128 DISCKALEIAKSNAVTNGVSERF--DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185 DI+ +++E+AK NA T G F L S ++ + + L DV+VSNPPYI L Sbjct: 144 DIAQESIEVAKENAKTLGADVTFYHGDLLSPFYETGQKL-DVVVSNPPYIPEEDWRGLST 202 Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KL 244 V++ +P+ +L GG DGL YR + + L + + EIG Q DV + + Sbjct: 203 VVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQNKAIVAFEIGVGQGEDVKALLQQTFPR 262 Query: 245 FLVNAFKDYGGNDRVLL 261 V D G DR++ Sbjct: 263 AQVEVVFDINGKDRMVF 279 >gi|210634611|ref|ZP_03298188.1| hypothetical protein COLSTE_02110 [Collinsella stercoris DSM 13279] gi|210158739|gb|EEA89710.1| hypothetical protein COLSTE_02110 [Collinsella stercoris DSM 13279] Length = 357 Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 87/311 (27%), Positives = 131/311 (42%), Gaps = 57/311 (18%) Query: 7 SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66 + L VTG+S ++ + D +D R+ + A+VR K E + I G F + + Sbjct: 31 AEWLLSSVTGMSRTELYMSFDKPMDPRELDAMHAAVVRRAKGEPLQYIAGETTFRMIDVA 90 Query: 67 LSSDTFEPRPETELLVDSALAF-----------SLPRIE--------------------- 94 PRPETELLV+ L + S RIE Sbjct: 91 CEEGVLIPRPETELLVEEVLTYIDREVLGGAVASRARIELPWNSEVQAAREAEEKEAAAD 150 Query: 95 ----------------KRDVVRILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIA 137 + V R+L++G GTG + L++ E V DI +A+++A Sbjct: 151 AAASDSVVEEVEGSSGEDAVARVLEVGCGTGCISLSIASERRDRVAVVATDIEPRAVDLA 210 Query: 138 KSNAVTNGVSE-----RFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFD 191 N G+ R L S E G FDV+VSNPPYI + ++ L EV DF+ Sbjct: 211 ARNRDALGIDAKTVDIRLGNLVSPLDRETEWGTFDVLVSNPPYIPTDVMATLPHEVADFE 270 Query: 192 PRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR-IFESRKLFLVNAF 250 P ++LDGG DGL +R + L K+GL + E+ Y +D + + + V Sbjct: 271 PSLALDGGTDGLDIFRRLVSAAPFMLRKNGLLACEL-YEGHLDAAADLCRAAGMEDVRIV 329 Query: 251 KDYGGNDRVLL 261 D G R++L Sbjct: 330 DDLTGRPRIVL 340 >gi|110803251|ref|YP_699477.1| HemK family modification methylase [Clostridium perfringens SM101] gi|110683752|gb|ABG87122.1| modification methylase, HemK family [Clostridium perfringens SM101] Length = 587 Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 69/259 (26%), Positives = 124/259 (47%), Gaps = 7/259 (2%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L ++ +I + + + N + + + ILG +F + Sbjct: 326 DTQLLLGKILEKDKIWLITNKNEEVKKSDEIHFLNLLEKRKSKMPMQYILGTCEFMGLDF 385 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 + PR +TE++V+ L I++ + + DL G+GA+ L+L Sbjct: 386 YVEEGVLIPRGDTEIIVEEVLN----NIDEDAEINVCDLCCGSGAIGLSLANYRKNIIVD 441 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIVDC 182 VDI ++ + N +S+R ++SD S V +D++VSNPPYI + +++ Sbjct: 442 LVDIDDIPEKVTRKNIRELELSKRCGFIKSDLLSEVIKKGNKYDILVSNPPYIRTEVINT 501 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 L +V+D++P ++LDGG DGL YR I D L ++G+ + EIG++Q DV + + Sbjct: 502 LMKDVKDYEPHLALDGGEDGLIFYRRIIDESLEVLKENGILAFEIGHDQGEDVKNLMIEK 561 Query: 243 KLFLVNAFKDYGGNDRVLL 261 + V KD G DR ++ Sbjct: 562 GYYDVKVIKDLAGLDRCVI 580 >gi|262382449|ref|ZP_06075586.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B] gi|298374644|ref|ZP_06984602.1| protein-(glutamine-N5) methyltransferase [Bacteroides sp. 3_1_19] gi|262295327|gb|EEY83258.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B] gi|298269012|gb|EFI10667.1| protein-(glutamine-N5) methyltransferase [Bacteroides sp. 3_1_19] Length = 318 Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 85/290 (29%), Positives = 127/290 (43%), Gaps = 48/290 (16%) Query: 13 RVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSDT 71 RV GLS+HQ+++ L D ++F + IV L+ ++ I +LG DFY + ++ D Sbjct: 31 RVCGLSTHQLLLGKGKELSDTEKFKIKE-IVEGLRLYKPIQYLLGIADFYGMEFKVTPDV 89 Query: 72 FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131 PRPET LV+ + + RILD+GTG+G + ++L K P + VDIS Sbjct: 90 LIPRPETAELVERIITDY-----RGQAPRILDIGTGSGCIAISLAKHLPKAEVAAVDISP 144 Query: 132 KALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGL------------------------ 164 +AL +A+ NA N VS F D L + S ++G Sbjct: 145 EALAVAEENARLNQVSVSFLELDILSEGYPSFMQGKLKFHVEETKVSRKENKSFTYMKPK 204 Query: 165 -------------FDVIVSNPPYIESVIVDCLGLEVRDFDPRISL-DGGIDGLSHYRTIA 210 F+ IVSNPPYI + + V + +P ++L D L YR IA Sbjct: 205 SHTEETAVSPIGNFNCIVSNPPYIMNKEKATMEANVLENEPHLALFVPDDDPLLFYRAIA 264 Query: 211 DGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 RHL + G EI + V + V +D G DR++ Sbjct: 265 RFGQRHLVEGGHLYFEINALCGKETVAMLRQENYTEVELIQDLYGKDRIV 314 >gi|315223720|ref|ZP_07865570.1| protein-(glutamine-N5) methyltransferase [Capnocytophaga ochracea F0287] gi|314946295|gb|EFS98294.1| protein-(glutamine-N5) methyltransferase [Capnocytophaga ochracea F0287] Length = 281 Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 70/225 (31%), Positives = 117/225 (52%), Gaps = 13/225 (5%) Query: 42 IVRSLK-HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR 100 ++R L+ + I ILG +F++ R ++ + PRPETE LVD L P +K + ++ Sbjct: 61 VIRELQTAKPIQYILGETEFFSNRFFVNENVLIPRPETEELVDWVLQ-EYP--DKSEKIK 117 Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF-- 158 ILD+GTG+G + ++L K P +D+S AL++AK NA N V F LQ D Sbjct: 118 ILDVGTGSGCIAISLAKALPNAVVTAIDVSEGALKVAKRNAELNNVVTHF--LQQDILRI 175 Query: 159 SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL---DGGIDGLSHYRTIADGVSR 215 ++ +D+I+SNPPY+ + + V +++P ++L D + L Y IA + Sbjct: 176 ETLPDKYDIIISNPPYVRELEKKEIRHNVLEYEPHLALFVRDN--NPLLFYDKIATLAQQ 233 Query: 216 HLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 LN +G EI ++ + E + + +D GNDR++ Sbjct: 234 SLNPNGSLFFEINQYLGQEMKTLLEQKHFTEITLRQDLFGNDRMI 278 >gi|297559305|ref|YP_003678279.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296843753|gb|ADH65773.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 287 Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 70/227 (30%), Positives = 113/227 (49%), Gaps = 6/227 (2%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101 + R E + I G F + L + F PRPETE++VD A+ +L ++ D + + Sbjct: 58 VSRREAREPLQHITGRAYFRYLELRVGPGVFVPRPETEIMVDWAIQ-TLRAMDVADPL-V 115 Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW---F 158 +DLGTG+GA+ +++ +E P + V++ AL A+ N +G ++R + D Sbjct: 116 VDLGTGSGAIAISIAQEVPRSRVHTVEVDPDALAWARRNIDASGHADRVTSHHGDMRTAL 175 Query: 159 SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 + G D+++SNPPY+ + + EVRD+DP +L G DGL R + R L Sbjct: 176 PQLNGRVDLLISNPPYVPTREAGAIPPEVRDYDPAPALWSGEDGLDMIRALEAVGRRLLR 235 Query: 219 KDGLCSVEIGYNQKVDVVRIF-ESRKLFLVNAFKDYGGNDRVLLFCR 264 G +VE Q +D+ +F E R V KD DR ++ R Sbjct: 236 PGGAMAVEHHDGQGIDIPWLFPEDRGWRDVLNRKDLARRDRFVVMRR 282 >gi|217962817|ref|YP_002341395.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacillus cereus AH187] gi|217067117|gb|ACJ81367.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacillus cereus AH187] Length = 283 Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 79/264 (29%), Positives = 123/264 (46%), Gaps = 25/264 (9%) Query: 11 LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70 LC V + ++++ + Q T I + ++ I ++G FY ++ + Sbjct: 28 LCHVLKTNRTGLLMNMREEITAEQEKSFTEFIHKHVEGIPIQYMIGHEMFYGRSFFVNEE 87 Query: 71 TFEPRPETELLVDSALAFSLPRIEKR---DVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 PRPETE L+ L RIE+ + + + D+GTG+GA+ + L E+ V Sbjct: 88 VLIPRPETEELIVGVLE----RIERHFSDEKIHVADIGTGSGAISITLALENKNLHVYTV 143 Query: 128 DISCKALEIAKSNAVTNGVSERF--DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185 DI+ ++E+AK NA T G F L S ++ + + L DV+VSNPPYI L Sbjct: 144 DIAQGSIEVAKENAKTLGAEVTFYHGDLLSPFYETGQKL-DVVVSNPPYIPEEDWRGLSP 202 Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245 V++ +P+ +L GG DGL YR + + L K + + EIG Q DV K Sbjct: 203 VVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEIGIGQGEDV-------KGL 255 Query: 246 LVNAFK--------DYGGNDRVLL 261 L AF D G DR++ Sbjct: 256 LQQAFPHAHVEVVFDINGKDRMVF 279 >gi|261855645|ref|YP_003262928.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Halothiobacillus neapolitanus c2] gi|261836114|gb|ACX95881.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Halothiobacillus neapolitanus c2] Length = 286 Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 75/265 (28%), Positives = 123/265 (46%), Gaps = 20/265 (7%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A+ D S + ++ GL + +++ + +L L +A R E + I G++ F+ Sbjct: 26 AMVDIRSLVSQLAGLDRARQLMELERLLPSATAARLRSAFERRAAGEPVAYITGFKPFWR 85 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 ++ T PRPETE L++ ++L +I + + + DLGTG+G + ++L E P Sbjct: 86 HEFLVTPATLIPRPETEHLLE----WALEKIPPQQALTVADLGTGSGVLAISLAIERPQI 141 Query: 123 KGVGVDISCKALEIAKSNA--VTNGVSERFDTLQSDWFSSVEGLF-----DVIVSNPPYI 175 + G D+S AL +A+ N + + LQ W G+F DVIVSNPPYI Sbjct: 142 QVFGCDLSRDALLVARENESRLRADAALPIRWLQGSWL----GMFKPESLDVIVSNPPYI 197 Query: 176 ESVIVDCLGLEVRD--FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233 D L + D F+P+ +L +G++ YR I + S L G E GY+Q Sbjct: 198 RP---DDPHLAIGDLRFEPQSALVAQDEGMADYRQIIEQASTRLKPGGWILFEHGYDQAN 254 Query: 234 DVVRIFESRKLFLVNAFKDYGGNDR 258 V + ++ D G R Sbjct: 255 AVAECLAQKGFQTISHRTDLAGQVR 279 >gi|163789459|ref|ZP_02183898.1| hemK protein [Carnobacterium sp. AT7] gi|159875313|gb|EDP69378.1| hemK protein [Carnobacterium sp. AT7] Length = 282 Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 74/212 (34%), Positives = 111/212 (52%), Gaps = 8/212 (3%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110 + +I+G+ FY+ + ++ DT PRPETE +VD L + +LD+GTGTG Sbjct: 72 VQQIVGYGWFYDRKFKVTKDTLIPRPETEEIVD----IFLKETSTNQKLTVLDIGTGTGI 127 Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIV 169 + + + KE P F D+S KAL++AK NA +S L+ D V+ FDVI+ Sbjct: 128 IGITIKKERPLFDVTATDLSSKALKVAKENA--ESLSAEVRLLEGDLTEPVKKETFDVII 185 Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY 229 SNPPYI + V + V ++P ++L +GL+ Y+ +A LN G +EIG+ Sbjct: 186 SNPPYISTDEVGYMDESVLHYEPHLALFAENNGLAIYQRLAKETPAILNPGGEILLEIGF 245 Query: 230 NQKVDVVRIFESR-KLFLVNAFKDYGGNDRVL 260 Q V IF+ V KD GNDR++ Sbjct: 246 KQGKSVQEIFQQAFPKAEVAIGKDMSGNDRLI 277 >gi|300812482|ref|ZP_07092908.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|313123398|ref|YP_004033657.1| protein-(glutamine-n5) methyltransferase, release factor-specific [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|300496543|gb|EFK31639.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|312279961|gb|ADQ60680.1| Protein-(Glutamine-N5) methyltransferase, release factor-specific [Lactobacillus delbrueckii subsp. bulgaricus ND02] Length = 280 Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 84/260 (32%), Positives = 129/260 (49%), Gaps = 19/260 (7%) Query: 10 FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69 L GL+ Q + D L D + + R K +S ILG+ F RL ++ Sbjct: 27 LLAERLGLTPSQFQLKQDMELSDAEVKQARKDMKRLAKGDSPQYILGYAWFLGYRLRVAK 86 Query: 70 DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV---- 125 PR ETE LV+ ALA ++ D V LDLGTG+G + +AL KE+ KG+ Sbjct: 87 GVLIPRFETEELVEWALA----HLQDGDTV--LDLGTGSGNITVALAKEAES-KGIKDLH 139 Query: 126 --GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183 D+ L I++ N + G+ T +++ + G FD+I+SNPPYI+ + + Sbjct: 140 FYASDVKDTPLRISEENFLDYGLD--VTTRKANVLLGL-GKFDLIISNPPYIKPSEKNVM 196 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 V +P +L GG DGL+ YR A+ V HLN G +E G++++ ++ +F + K Sbjct: 197 DKGVLANEPEEALFGGQDGLAFYRKFAEEVRDHLNSGGRFFMEFGFSEEDELKALF-AEK 255 Query: 244 L--FLVNAFKDYGGNDRVLL 261 L F V +D G R+L Sbjct: 256 LPDFKVEFRRDMAGKPRMLF 275 >gi|255532070|ref|YP_003092442.1| modification methylase, HemK family [Pedobacter heparinus DSM 2366] gi|255345054|gb|ACU04380.1| modification methylase, HemK family [Pedobacter heparinus DSM 2366] Length = 288 Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 72/236 (30%), Positives = 115/236 (48%), Gaps = 3/236 (1%) Query: 30 LDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFS 89 LD ++ F L N + + + +LG FY + L PRPETE LV L + Sbjct: 50 LDSKELFILQNILTELQSGKPLQYVLGETVFYGLPFKLGPSVLIPRPETEELVAWVLEST 109 Query: 90 LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 +R++D+GTG+G + ++L K P + +D+S A++IA SNA+ N V + Sbjct: 110 ALEAVTGAALRLIDIGTGSGCIAISLKKNFPEAEVSALDVSEAAIDIAGSNALLNEVDIK 169 Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG-LSHYRT 208 F F++ + FDV+VSNPPYI + + V + +P ++L + L Y Sbjct: 170 FIQADIREFTTKQK-FDVVVSNPPYITLKEKEQMQDHVLNHEPHLALFVSNEAPLVFYEA 228 Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 IAD L+ GL EI + + V + E++ + KD G DR ++ CR Sbjct: 229 IADFAWTTLSGRGLLFFEINEHLGKETVELLEAKSFTDIILKKDMQGKDR-MIRCR 283 >gi|282861118|ref|ZP_06270183.1| modification methylase, HemK family [Streptomyces sp. ACTE] gi|282563776|gb|EFB69313.1| modification methylase, HemK family [Streptomyces sp. ACTE] Length = 281 Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 76/241 (31%), Positives = 115/241 (47%), Gaps = 13/241 (5%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ V G+ ++ PD+ D R++ T + R E + I G F + L Sbjct: 26 DAEELAAFVHGVKRGELHNVPDADFD--ARYWET--VARREAREPLQHITGRAFFRYLEL 81 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR--ILDLGTGTGAVCLALLKESPFFK 123 + F PRPETE S + +++ + DVV I+DL TG+GA+ LA+ +E P + Sbjct: 82 QVGPGVFVPRPETE----SVVGWAIDAVRAMDVVEPLIVDLCTGSGAIALAMAQEVPRSR 137 Query: 124 GVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182 GV++S AL + NA + V+ R D L + +G D+++SNPPYI + Sbjct: 138 VHGVELSEDALRWTRKNAEGSRVTLHRQDALSA--LPEFDGQVDLVISNPPYIPLTEWEY 195 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 + E RD DP+++L G DGL R I R L GL +E Q V IF Sbjct: 196 VAPEARDHDPQMALFSGEDGLDTIRGIERTAHRLLRPGGLVVIEHADTQGGQVPWIFTEE 255 Query: 243 K 243 + Sbjct: 256 R 256 >gi|15896139|ref|NP_349488.1| S-adenosylmethionine-dependent methyltransferase, HEMK ortholog [Clostridium acetobutylicum ATCC 824] gi|15025933|gb|AAK80828.1|AE007786_1 S-adenosylmethionine-dependent methyltransferase, HEMK ortholog [Clostridium acetobutylicum ATCC 824] gi|325510293|gb|ADZ21929.1| S-adenosylmethionine-dependent methyltransferase [Clostridium acetobutylicum EA 2018] Length = 285 Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 65/194 (33%), Positives = 104/194 (53%), Gaps = 7/194 (3%) Query: 74 PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133 PRP+TE+LV++ L + IE + ++ D+ TG+GA+ L++ K + + + DIS A Sbjct: 93 PRPDTEILVEAVLEY----IELNNYKKVCDVCTGSGAIGLSIAKYAKDVEVLCSDISPDA 148 Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSS-VE--GLFDVIVSNPPYIESVIVDCLGLEVRDF 190 + ++K N + +R D +E FD++VSNPPYI + L +V+D+ Sbjct: 149 IRVSKINRQGLNLEDRVKIENGDLLEKPIERGEKFDIVVSNPPYIREDEIPKLMDDVKDY 208 Query: 191 DPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAF 250 +P I+L GG DGL YR I + L GL + EIG ++ +V I E+ + Sbjct: 209 EPIIALVGGEDGLDFYRRITSMSKKVLKPGGLIAYEIGSDEANEVSNILENEGFVSIETR 268 Query: 251 KDYGGNDRVLLFCR 264 KD+ DRV+L R Sbjct: 269 KDFARMDRVVLAVR 282 >gi|325125450|gb|ADY84780.1| Protoporphyrinogen oxidase [Lactobacillus delbrueckii subsp. bulgaricus 2038] Length = 280 Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 84/260 (32%), Positives = 129/260 (49%), Gaps = 19/260 (7%) Query: 10 FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69 L GL+ Q + D L D + + R K +S ILG+ F RL ++ Sbjct: 27 LLAERLGLTPSQFQLKQDMELSDAEVKQARKDMKRLAKGDSPQYILGYAWFLGYRLRVAK 86 Query: 70 DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV---- 125 PR ETE LV+ ALA ++ D V LDLGTG+G + +AL KE+ KG+ Sbjct: 87 GVLIPRFETEELVEWALA----HLQDGDTV--LDLGTGSGNITVALAKEAES-KGIKDLH 139 Query: 126 --GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183 D+ L I++ N + G+ T +++ + G FD+I+SNPPYI+ + + Sbjct: 140 FYASDVKDTPLRISEENFLDYGLD--VTTRKANVLLGL-GKFDLIISNPPYIKPSEKNVM 196 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 V +P +L GG DGL+ YR A+ V HLN G +E G++++ ++ +F + K Sbjct: 197 DKGVLANEPEEALFGGQDGLAFYRKFAEEVRDHLNSGGRFFMEFGFSEEDELKAMF-AEK 255 Query: 244 L--FLVNAFKDYGGNDRVLL 261 L F V +D G R+L Sbjct: 256 LPDFKVEFRRDMAGKPRMLF 275 >gi|257440234|ref|ZP_05615989.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Faecalibacterium prausnitzii A2-165] gi|257197268|gb|EEU95552.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Faecalibacterium prausnitzii A2-165] Length = 283 Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 68/239 (28%), Positives = 111/239 (46%), Gaps = 10/239 (4%) Query: 27 DSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL 86 D+ L Q L R E + + G F + L + PR +TE++ ++A Sbjct: 47 DAPLGAEQAERLEALTARRAAREPLQYLCGSWPFLDFELAVGPGVLCPRADTEVVAEAAA 106 Query: 87 AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146 + + R+LDL GTG + L + + P + ++ S A + NA + V Sbjct: 107 GM----LAGVEAPRVLDLCAGTGCLGLGVKRFCPAAQVTSLEKSPAAYRYLEQNAHLSPV 162 Query: 147 SERFDTLQSD----WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202 +Q D W + EG D+IVSNPPY+ + + L EV +P ++L+ G DG Sbjct: 163 LT-ITPVQGDLFTYWQTLPEGQLDLIVSNPPYLTAAEMGALQPEVAQ-EPAMALEAGEDG 220 Query: 203 LSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 L YR IA+ + L G ++EIG+ Q+ V + + + KD+GGNDR ++ Sbjct: 221 LVFYRAIAEHYQKVLRPGGALALEIGWQQREAVTALLAANGWTDIVCRKDFGGNDRCVM 279 >gi|119509583|ref|ZP_01628730.1| protoporphyrinogen oxidase [Nodularia spumigena CCY9414] gi|119465772|gb|EAW46662.1| protoporphyrinogen oxidase [Nodularia spumigena CCY9414] Length = 304 Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 69/207 (33%), Positives = 103/207 (49%), Gaps = 17/207 (8%) Query: 46 LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRIL--- 102 L + I + WR F ++ +S+ PRPETE L+D A+A + K L Sbjct: 82 LPVQYITGVTPWRQF---KIAVSNAVLIPRPETEYLIDLAVAAA----TKSGAAPFLNSG 134 Query: 103 ---DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF- 158 DLGTG+GA+ L L P VD S +AL+IA+ NA G + Q W+ Sbjct: 135 HWADLGTGSGAIALGLADAFPKATIHAVDYSPEALKIARDNARNLGFDNQIKFYQGSWWE 194 Query: 159 --SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216 ++++G F +VSNPPYI + V L EV +P ++LDGG DGL R + + + Sbjct: 195 PLAALKGEFSGMVSNPPYIPTSTVATLQPEVVKHEPHLALDGGSDGLDCIRQLIEISPGY 254 Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRK 243 L G+ +E+ Q D VR +++ Sbjct: 255 LRPGGVWLIEMMAGQ-ADTVRTLLAKQ 280 >gi|47570470|ref|ZP_00241103.1| hemK protein [Bacillus cereus G9241] gi|47552866|gb|EAL11284.1| hemK protein [Bacillus cereus G9241] Length = 283 Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 79/264 (29%), Positives = 123/264 (46%), Gaps = 25/264 (9%) Query: 11 LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70 LC V + ++++ + Q I + ++ I ++G FY ++ + Sbjct: 28 LCHVLKTNRTGLLMNMREEITAEQETSFKEFIHKHVEGIPIQYMIGHEMFYGRSFFVNEE 87 Query: 71 TFEPRPETELLVDSALAFSLPRIEKR---DVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 PRPETE L+ L RIE+ + + + D+GTG+GA+ + L E+ V Sbjct: 88 VLIPRPETEELIVGVLE----RIERHFDDEKLHVADIGTGSGAISITLALENKNLHVYTV 143 Query: 128 DISCKALEIAKSNAVTNGVSERF--DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185 DI+ +++E+AK NA T G F L S ++ + + L DV+VSNPPYI L Sbjct: 144 DIAQESIEVAKENAKTLGAEVTFYHGDLLSPFYETGQKL-DVVVSNPPYIPEEDWRGLSP 202 Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245 V++ +P+ +L GG DGL YR D + L K + + EIG Q DV K Sbjct: 203 VVKEHEPKRALVGGEDGLDFYRRFMDELPNVLQKKAIVAFEIGVGQGEDV-------KGL 255 Query: 246 LVNAFK--------DYGGNDRVLL 261 L AF D G DR++ Sbjct: 256 LQQAFPHAHVEIVFDINGKDRMVF 279 >gi|229087818|ref|ZP_04219934.1| Protein hemK [Bacillus cereus Rock3-44] gi|228695493|gb|EEL48362.1| Protein hemK [Bacillus cereus Rock3-44] Length = 283 Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 70/254 (27%), Positives = 124/254 (48%), Gaps = 5/254 (1%) Query: 11 LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70 LC V + ++++ + + Q T I + + + ++G+ FY ++ + Sbjct: 28 LCHVLKTNRTGLMMNMREEISEEQEKTFTEFIHKHVDGIPVQYMMGYEMFYGRSFFVNEE 87 Query: 71 TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130 PRPETE L+ L + R+ + + + D+GTG+GA+ + L E+ VDI+ Sbjct: 88 VLIPRPETEELIVGVLD-RVQRMFGKQELHVADIGTGSGAISITLALENQNLHVYTVDIA 146 Query: 131 CKALEIAKSNAVTNGVSERF--DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVR 188 +++E+A+ NA G + F L S ++ + + L DV+VSNPPYI L V+ Sbjct: 147 KESIEVAQENANALGANVTFYHGDLLSPFYETGQKL-DVVVSNPPYIPEEDWRGLSPVVK 205 Query: 189 DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL-V 247 + +P+ +L GG DGL YR + + L K + + E+G Q DV + + + V Sbjct: 206 EHEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEVGIGQGEDVKGLLQKTFPYAHV 265 Query: 248 NAFKDYGGNDRVLL 261 D G DR++ Sbjct: 266 EVVFDINGKDRMVF 279 >gi|104773786|ref|YP_618766.1| methylase of polypeptide chain release factors [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|103422867|emb|CAI97529.1| Methylase of polypeptide chain release factors [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] Length = 273 Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 84/259 (32%), Positives = 129/259 (49%), Gaps = 19/259 (7%) Query: 11 LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70 L GL+ Q + D L D + + R K +S ILG+ F RL ++ Sbjct: 21 LAERLGLTPSQFQLKQDMELSDAEVKQARKDMKRLAKGDSPQYILGYAWFLGYRLRVAKG 80 Query: 71 TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV----- 125 PR ETE LV+ ALA ++ D V LDLGTG+G + +AL KE+ KG+ Sbjct: 81 VLIPRFETEELVEWALA----HLQDGDTV--LDLGTGSGNITVALAKEAES-KGIKDLHF 133 Query: 126 -GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184 D+ L I++ N + G+ T +++ + G FD+I+SNPPYI+ + + Sbjct: 134 YASDVKDTPLRISEENFLDYGLD--VTTRKANVLLGL-GKFDLIISNPPYIKPSEKNVMD 190 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 V +P +L GG DGL+ YR A+ V HLN G +E G++++ ++ +F + KL Sbjct: 191 KGVLANEPEEALFGGQDGLAFYRKFAEEVRDHLNSGGRFFMEFGFSEEDELKAMF-AEKL 249 Query: 245 --FLVNAFKDYGGNDRVLL 261 F V +D G R+L Sbjct: 250 PDFKVEFRRDMAGKPRMLF 268 >gi|42784500|ref|NP_981747.1| HemK family modification methylase [Bacillus cereus ATCC 10987] gi|42740432|gb|AAS44355.1| modification methylase, HemK family [Bacillus cereus ATCC 10987] Length = 283 Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 78/264 (29%), Positives = 124/264 (46%), Gaps = 25/264 (9%) Query: 11 LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70 LC V + ++++ + Q T I + ++ I ++G FY ++ + Sbjct: 28 LCHVLKTNRTGILMNMREEITAEQEKSFTEFIHKHVEGIPIQYMIGHEMFYGRSFFVNEE 87 Query: 71 TFEPRPETELLVDSALAFSLPRIEKR---DVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 PRPETE L+ L RIE+ + + + D+GTG+GA+ + L E+ V Sbjct: 88 VLIPRPETEELIVGVLE----RIERHFGDEKLHVADIGTGSGAISITLALENKNLHVYTV 143 Query: 128 DISCKALEIAKSNAVTNGVSERF--DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185 DI+ +++E+A+ NA T G F L S ++ + + L DV+VSNPPYI L Sbjct: 144 DIAQESIEVAQENAKTLGAEVTFYHGDLLSPFYETGQKL-DVVVSNPPYIPEEDWRGLSP 202 Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245 V++ +P+ +L GG DGL YR + + L K + + EIG Q DV K Sbjct: 203 VVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEIGVGQGEDV-------KGL 255 Query: 246 LVNAFK--------DYGGNDRVLL 261 L AF D G DR++ Sbjct: 256 LQQAFPHAHVEVVFDINGKDRMVF 279 >gi|303256164|ref|ZP_07342180.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Burkholderiales bacterium 1_1_47] gi|302860893|gb|EFL83968.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Burkholderiales bacterium 1_1_47] Length = 267 Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 77/261 (29%), Positives = 116/261 (44%), Gaps = 13/261 (4%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D L V G+ ++ D VL + L + + + + +LG ++F+ Sbjct: 17 DKSFMLEHVCGMDKAAQLIHDDRVLSSDEERKLNDIAKKRSEGVPLPYLLGTQEFFARPF 76 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 ++ PR +TE LV+ L LP+ + DLGTG+G + + E P Sbjct: 77 LVNPSVLIPRSDTECLVE-WLIEHLPK-----NALVCDLGTGSGCIAATVALERPDLTVW 130 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS--VEGLFDVIVSNPPYIESVIVDCL 183 D+S AL +A++N G + +Q W E FD ++SNPPYIE D Sbjct: 131 ASDLSESALAVAQANCKALGADVKL--VQGSWLDPYPAELSFDAVISNPPYIER---DDK 185 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 L+ ++PR +L DGL YRTI + R K L +VE G+NQ V IFE Sbjct: 186 HLDALRYEPRSALTDESDGLIAYRTILPQIKRKAPKVQLIAVEHGWNQGEAVRSIFEENG 245 Query: 244 LFLVNAFKDYGGNDRVLLFCR 264 F+DYG N R + + Sbjct: 246 FKGSATFRDYGNNPRFTTWIK 266 >gi|86156793|ref|YP_463578.1| HemK family modification methylase [Anaeromyxobacter dehalogenans 2CP-C] gi|85773304|gb|ABC80141.1| [protein release factor]-glutamine N5-methyltransferase [Anaeromyxobacter dehalogenans 2CP-C] Length = 286 Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 78/236 (33%), Positives = 116/236 (49%), Gaps = 25/236 (10%) Query: 7 SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66 +H+ C ++ +D D L + + R + E + G RDFY Sbjct: 37 AHALRC-----ERMRLYLDFDKPLGAPELAAFRELVRRRGEGEPTAYLTGRRDFYGRPFR 91 Query: 67 LSSDTFEPRPETELLVDSALAFSLPRIEKRDVV----RILDLGTGTGAVCLALLKESPFF 122 + + PRPETEL++++A RD + LDL TG+GA+ ++L E Sbjct: 92 VDARVLVPRPETELVLEAA----------RDALPEGGAALDLCTGSGALGVSLALERAGA 141 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD-WFSSVEG-LFDVIVSNPPYIESVIV 180 + V D+S AL +A+ NA G + D Q D W + EG FDVIVSNPPY+ + Sbjct: 142 RVVATDLSADALVVAEENARALGAA--VDLRQGDLWAALREGERFDVIVSNPPYVPRGEL 199 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236 D L EVR +PR++LDGG DGL R I +G L G +E+ + + +DV+ Sbjct: 200 DTLPREVRR-EPRLALDGGPDGLDLLRRIVEGAPARLVPGGTLVLEM-HERHLDVL 253 >gi|333029740|ref|ZP_08457801.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacteroides coprosuis DSM 18011] gi|332740337|gb|EGJ70819.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacteroides coprosuis DSM 18011] Length = 277 Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 80/261 (30%), Positives = 117/261 (44%), Gaps = 8/261 (3%) Query: 2 QALRDSHSFLCR-VTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60 Q L+ +CR + L V + D L +R L +I R HE I + G F Sbjct: 19 QELKSITMVICRDILKLDEMDVYLRKDIKLSRSKRDRLKQSIKRLQNHEPIQYVSGSAYF 78 Query: 61 YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120 Y R + PRPETE LVD L E + +LD+GTG+G + +++ K +P Sbjct: 79 YGSRFRVKQGVLIPRPETEELVDLILR------ENKGRYALLDIGTGSGCIAISIAKNNP 132 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180 K D+S AL+IA+SN RF + S + FDVIVSNPPYI + Sbjct: 133 EAKVEAWDVSDDALKIARSNNKKLETHVRFRKQDILTYHSKKRKFDVIVSNPPYITNKEK 192 Query: 181 DCLGLEVRDFDPRISL-DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 + V +++P ++L + L Y I + L + G EI V V ++ Sbjct: 193 KLMDKNVLNWEPEVALFVEDHNPLLFYNRIGEVGLFLLRRGGRLYFEINQAYGVQVAKLL 252 Query: 240 ESRKLFLVNAFKDYGGNDRVL 260 E + V KD G DR++ Sbjct: 253 EQKGYKNVQVLKDLFGKDRIV 273 >gi|295115023|emb|CBL35870.1| protein-(glutamine-N5) methyltransferase, release factor-specific [butyrate-producing bacterium SM4/1] Length = 338 Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 74/245 (30%), Positives = 107/245 (43%), Gaps = 40/245 (16%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110 + ILG ++F + ++ PR +TE LV+ L R ILD+ TG+G Sbjct: 92 LQHILGSQEFMGLSFRVNEHVLIPRQDTETLVEEVLRDCPDR-----NADILDMCTGSGC 146 Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAV---------------------------- 142 + L+L + D+S AL +A NA Sbjct: 147 IGLSLAVLGRYRSVTAADVSEDALRVAAGNAKRLFLIQKDVVRAESKNFPGLPLRTELTV 206 Query: 143 ------TNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195 N + +F ++SD FS +DVIVSNPPYI S V+ L EVR+ +PR++ Sbjct: 207 WAGKNRENAETRQFRLVRSDLFSEFAAERYDVIVSNPPYIPSGEVEKLEPEVREHEPRLA 266 Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGG 255 LDG DGL YR +A+ +HL + G EIG Q V + + + KD G Sbjct: 267 LDGSADGLHFYRILAEECRKHLKEGGRVYFEIGCEQASAVTELLAQQGYTKIQVVKDAPG 326 Query: 256 NDRVL 260 DRV+ Sbjct: 327 LDRVV 331 >gi|283798431|ref|ZP_06347584.1| protein-(glutamine-N5) methyltransferase [Clostridium sp. M62/1] gi|291073836|gb|EFE11200.1| protein-(glutamine-N5) methyltransferase [Clostridium sp. M62/1] Length = 338 Score = 99.4 bits (246), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 74/245 (30%), Positives = 107/245 (43%), Gaps = 40/245 (16%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110 + ILG ++F + ++ PR +TE LV+ L R ILD+ TG+G Sbjct: 92 LQHILGSQEFMGLSFRVNEHVLIPRQDTETLVEEVLRDCPDR-----NADILDMCTGSGC 146 Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAV---------------------------- 142 + L+L + D+S AL +A NA Sbjct: 147 IGLSLAVLGRYRSVTAADVSEDALRVAAGNAKRLFLIQKDVVRAESKNFPGLPLRTELTV 206 Query: 143 ------TNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195 N + +F ++SD FS +DVIVSNPPYI S V+ L EVR+ +PR++ Sbjct: 207 WAGKNRENAETRQFRLVRSDLFSEFAAERYDVIVSNPPYIPSGEVEKLEPEVREHEPRLA 266 Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGG 255 LDG DGL YR +A+ +HL + G EIG Q V + + + KD G Sbjct: 267 LDGSADGLHFYRILAEECRKHLKEGGRVYFEIGCEQASAVTELLAQQGYTKIQVVKDAPG 326 Query: 256 NDRVL 260 DRV+ Sbjct: 327 LDRVV 331 >gi|182420442|ref|ZP_02641457.2| protein-(glutamine-N5) methyltransferase, release factor-specific [Clostridium perfringens NCTC 8239] gi|182382208|gb|EDT79687.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Clostridium perfringens NCTC 8239] Length = 572 Score = 99.4 bits (246), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 70/259 (27%), Positives = 123/259 (47%), Gaps = 7/259 (2%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L +V +I + + N + + + ILG +F + Sbjct: 311 DTQLLLGKVLEKDKIWLITNKSEEVKKSDEIHFLNLLEKRKSKMPMQYILGTCEFMGLDF 370 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 + PR +TE++V+ L I++ + + DL G+GA+ L+L Sbjct: 371 YVEEGVLIPRGDTEIIVEEVLN----NIDEDAEINVCDLCCGSGAIGLSLANYRKNIIVD 426 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIVDC 182 VDI ++ + N +S+R ++SD S V +D++VSNPPYI + +++ Sbjct: 427 LVDIDDIPEKVTRKNIRELELSKRCGFIKSDLLSEVIKKGNKYDILVSNPPYIRTEVINT 486 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 L +V+D++P ++LDGG DGL YR I D L ++G+ + EIG++Q DV + + Sbjct: 487 LMEDVKDYEPHLALDGGEDGLIFYRRIIDESLEVLKENGILAFEIGHDQGEDVKNLMIEK 546 Query: 243 KLFLVNAFKDYGGNDRVLL 261 + V KD G DR ++ Sbjct: 547 GYYDVKVIKDLAGLDRCVI 565 >gi|299782949|gb|ADJ40947.1| Protein-(Glutamine-N5) methyltransferase, release factor-specific [Lactobacillus fermentum CECT 5716] Length = 283 Score = 99.4 bits (246), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 62/201 (30%), Positives = 109/201 (54%), Gaps = 7/201 (3%) Query: 41 AIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR 100 AI R E ++G F+ + ++ D P ETE LV+ L S+P ++ ++ Sbjct: 62 AITRVASSEPAQYVVGKAPFFGRKFVVNRDVLIPETETEELVEWVLD-SMPADKE---LK 117 Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LDLGTG+G + + L E P ++ DIS AL+IA +N +G + + ++SD F+ Sbjct: 118 VLDLGTGSGVIGITLALERPKWQVTLSDISAAALKIALTNQRLHGTN--LNQVESDLFAR 175 Query: 161 V-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 + + FD+IV+NPPY+ +D + EV +++P ++L +GL+ YR + HL Sbjct: 176 LGDQRFDLIVTNPPYVALSEIDEMDPEVLEYEPPLALFASENGLAFYRRLFAAAGEHLTP 235 Query: 220 DGLCSVEIGYNQKVDVVRIFE 240 G+ E G+ Q+ + R+ + Sbjct: 236 RGVLFGETGHRQEERIQRLLK 256 >gi|110798817|ref|YP_696881.1| HemK family methyltransferase [Clostridium perfringens ATCC 13124] gi|168210132|ref|ZP_02635757.1| methyltransferase, HemK family [Clostridium perfringens B str. ATCC 3626] gi|110673464|gb|ABG82451.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Clostridium perfringens ATCC 13124] gi|170711816|gb|EDT23998.1| methyltransferase, HemK family [Clostridium perfringens B str. ATCC 3626] Length = 587 Score = 99.4 bits (246), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 70/259 (27%), Positives = 123/259 (47%), Gaps = 7/259 (2%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L +V +I + + N + + + ILG +F + Sbjct: 326 DTQLLLGKVLEKDKIWLITNKSEEVKKSDEIHFLNLLEKRKSKMPMQYILGTCEFMGLDF 385 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 + PR +TE++V+ L I++ + + DL G+GA+ L+L Sbjct: 386 YVEEGVLIPRGDTEIIVEEVLN----NIDEDAEINVCDLCCGSGAIGLSLANYRKNIIVD 441 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIVDC 182 VDI ++ + N +S+R ++SD S V +D++VSNPPYI + +++ Sbjct: 442 LVDIDDIPEKVTRKNIRELELSKRCGFIKSDLLSEVIKKGNKYDILVSNPPYIRTEVINT 501 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 L +V+D++P ++LDGG DGL YR I D L ++G+ + EIG++Q DV + + Sbjct: 502 LMEDVKDYEPHLALDGGEDGLIFYRRIIDESLEILKENGILAFEIGHDQGEDVKNLMIEK 561 Query: 243 KLFLVNAFKDYGGNDRVLL 261 + V KD G DR ++ Sbjct: 562 GYYDVKVIKDLAGLDRCVI 580 >gi|284037819|ref|YP_003387749.1| modification methylase, HemK family [Spirosoma linguale DSM 74] gi|283817112|gb|ADB38950.1| modification methylase, HemK family [Spirosoma linguale DSM 74] Length = 282 Score = 99.4 bits (246), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 72/225 (32%), Positives = 107/225 (47%), Gaps = 27/225 (12%) Query: 47 KHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGT 106 + E I ++G F + +S D PRPETE LV + R+ D V ILD+GT Sbjct: 66 RQEPIQHVIGTTIFCGLEFEVSPDVLIPRPETEDLVRLIMHDFADRV---DDVPILDIGT 122 Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-- 164 G+G + + + + P G D+S KAL +A+ NA + L++D S++ + Sbjct: 123 GSGCIAITMARFLPQSVVTGWDVSEKALTLARQNA---------EHLKADVQFSIQDILN 173 Query: 165 --------FDVIVSNPPYIESVIVDCLGLEVRDFDPRISL---DGGIDGLSHYRTIADGV 213 FD +VSNPPY+ + V D++P ++L D D L Y+ +AD Sbjct: 174 VPADFNERFDCVVSNPPYVTRSEAAEMDRNVLDYEPDLALFVEDN--DPLVFYKAVADFC 231 Query: 214 SRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258 RHL KDG C VEI ++F R + +KD G DR Sbjct: 232 VRHLTKDGACYVEINERFGEATRQVFADRGFTKIQVYKDIHGKDR 276 >gi|168213693|ref|ZP_02639318.1| protein- methyltransferase, release factor-specific [Clostridium perfringens CPE str. F4969] gi|170714843|gb|EDT27025.1| protein- methyltransferase, release factor-specific [Clostridium perfringens CPE str. F4969] Length = 587 Score = 99.4 bits (246), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 70/259 (27%), Positives = 123/259 (47%), Gaps = 7/259 (2%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L +V +I + + N + + + ILG +F + Sbjct: 326 DTQLLLGKVLEKDKIWLITNKSEEVKKSDEIHFLNLLEKRKSKMPMQYILGTCEFMGLDF 385 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 + PR +TE++V+ L I++ + + DL G+GA+ L+L Sbjct: 386 YVEEGVLIPRGDTEIIVEEVLN----NIDEDAEINVCDLCCGSGAIGLSLANYRKNIIVD 441 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIVDC 182 VDI ++ + N +S+R ++SD S V +D++VSNPPYI + +++ Sbjct: 442 LVDIDDIPEKVTRKNIRELELSKRCGFIKSDLLSEVIKKGNKYDILVSNPPYIRTEVINT 501 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 L +V+D++P ++LDGG DGL YR I D L ++G+ + EIG++Q DV + + Sbjct: 502 LMEDVKDYEPHLALDGGEDGLIFYRRIIDESLEVLKENGILAFEIGHDQGEDVKNLMIEK 561 Query: 243 KLFLVNAFKDYGGNDRVLL 261 + V KD G DR ++ Sbjct: 562 GYYDVKVIKDLAGLDRCVI 580 >gi|253681154|ref|ZP_04861957.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Clostridium botulinum D str. 1873] gi|253563003|gb|EES92449.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Clostridium botulinum D str. 1873] Length = 282 Score = 99.4 bits (246), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 70/239 (29%), Positives = 121/239 (50%), Gaps = 17/239 (7%) Query: 30 LDDRQRFFLTNAIVRSLKHE-SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAF 88 L D++ FF +++ K + + ILG +F + + PR +TE+LV+ + Sbjct: 51 LKDQEEFF---KLIKLRKDKMPVKYILGECEFMGLNFNVKEGVLIPRADTEVLVEEVIK- 106 Query: 89 SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD---ISCKALEIAKSNAVTNG 145 I++ + D+ G+GA+ +++ K + K +D IS A+E+ K+N Sbjct: 107 ---EIKENGYNNVCDVCCGSGAIGISIGK---YIKETIIDCYDISDIAIEVTKNNINKFQ 160 Query: 146 VSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202 ++ + +SD + ++DVIVSNPPYI+ ++ L +V++++P I+L GG DG Sbjct: 161 LNNKVYVYKSDLLDEAKRQNKMYDVIVSNPPYIKEEVIPTLMKDVKEYEPYIALCGGKDG 220 Query: 203 LSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 L Y I LN+ GL + EIGY+Q +V I + KD G DRV++ Sbjct: 221 LYFYNKITKNSVDFLNRGGLLAFEIGYDQGKEVKDILIENGFSNIKVIKDLAGLDRVVM 279 >gi|147669661|ref|YP_001214479.1| HemK family modification methylase [Dehalococcoides sp. BAV1] gi|146270609|gb|ABQ17601.1| modification methylase, HemK family [Dehalococcoides sp. BAV1] Length = 277 Score = 99.4 bits (246), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 72/260 (27%), Positives = 118/260 (45%), Gaps = 10/260 (3%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 +A +S L G+S Q+ ++ + L + + R L+ E I G ++FY Sbjct: 21 EARLESEILLRHTLGISRVQLHLELERELKPEKETVYFETLQRRLEGEPSAYITGEKEFY 80 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 + PRPETE L++ AL + + I D+GTG+G + + L E Sbjct: 81 GRTFLVDKRVLIPRPETEHLIEKALQIA----RHYECPYIADIGTGSGVIAITLALELKD 136 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181 DIS ALE+A+ NA + +R Q D SS+ + D++ +N PY+ Sbjct: 137 AYVYAADISEDALEVARQNAEEYRLEKRLSFYQGDLLSSLPEMVDILAANLPYVPKAEAG 196 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR-IFE 240 L + +PR++LDGG DGL YR + + L G +EIG +Q + + I + Sbjct: 197 LL-----NGEPRLALDGGKDGLDLYRRLIPILPARLRPGGTALLEIGIHQSELLAKYIKD 251 Query: 241 SRKLFLVNAFKDYGGNDRVL 260 + + DY G R++ Sbjct: 252 TLPQASLEIISDYAGIPRIV 271 >gi|325684405|gb|EGD26573.1| protoporphyrinogen oxidase [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 280 Score = 99.4 bits (246), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 82/260 (31%), Positives = 128/260 (49%), Gaps = 19/260 (7%) Query: 10 FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69 L GL+ Q + D L D + + R K +S ILG+ F RL ++ Sbjct: 27 LLAERLGLTPSQFQLKQDMELSDAEVKQARKDMKRLAKGDSPQYILGYAWFLGYRLRVAK 86 Query: 70 DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV---- 125 PR ETE LV+ AL + +D +LDLGTG+G + +AL KE+ KG+ Sbjct: 87 GVLIPRFETEELVEWAL------VHLQDGDTVLDLGTGSGNITVALAKEAES-KGIKDLH 139 Query: 126 --GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183 D+ L I++ N + G+ T +++ + G FD+I+SNPPYI+ + + Sbjct: 140 FYASDVKDTPLRISEENFLDYGLD--VTTRKANVLLGL-GKFDLIISNPPYIKPSEKNVM 196 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 V +P +L GG DGL+ YR A+ V HLN G +E G++++ ++ +F + K Sbjct: 197 DKGVLANEPEEALFGGQDGLAFYRKFAEEVRDHLNSGGRFFMEFGFSEEDELKALF-AEK 255 Query: 244 L--FLVNAFKDYGGNDRVLL 261 L F V +D G R+L Sbjct: 256 LPDFKVEFRRDMAGKPRMLF 275 >gi|18311185|ref|NP_563119.1| hypothetical protein CPE2203 [Clostridium perfringens str. 13] gi|18145868|dbj|BAB81909.1| conserved hypothetical protein [Clostridium perfringens str. 13] Length = 569 Score = 99.4 bits (246), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 68/221 (30%), Positives = 114/221 (51%), Gaps = 8/221 (3%) Query: 44 RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103 R LK + ILG +F + + PR +TE++V+ L I++ + + D Sbjct: 347 RKLKM-PMQYILGTCEFMGLDFYVEEGVLIPRGDTEIIVEEVLN----NIDEDAEINVCD 401 Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-- 161 L G+GA+ L+L VDI ++ + N +S+R ++SD S V Sbjct: 402 LCCGSGAIGLSLANYRKNIIVDLVDIDDIPEKVTRKNIRELELSKRCGFIKSDLLSEVIK 461 Query: 162 -EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220 +D++VSNPPYI + +++ L +V+D++P ++LDGG DGL YR I D L ++ Sbjct: 462 KGNKYDILVSNPPYIRTEVINTLMEDVKDYEPHLALDGGEDGLIFYRRIIDESLEVLKEN 521 Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 G+ + EIG++Q DV + + + V KD G DR ++ Sbjct: 522 GILAFEIGHDQGEDVKNLMIEKGYYDVKVIKDLAGLDRCVI 562 >gi|328954787|ref|YP_004372120.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Coriobacterium glomerans PW2] gi|328455111|gb|AEB06305.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Coriobacterium glomerans PW2] Length = 337 Score = 99.4 bits (246), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 85/292 (29%), Positives = 120/292 (41%), Gaps = 40/292 (13%) Query: 10 FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69 L TGL+ ++ + D L + + + R E + I F + + Sbjct: 34 LLSAATGLARIELYMSFDRPLGASELDVMHRFVARRSTGEPLQYITEQAMFRTIAIACEP 93 Query: 70 DTFEPRPETELLVDSALAF----------------SLP------------------RIEK 95 PRPETE+LV LAF LP + Sbjct: 94 GVLIPRPETEVLVGEVLAFLDHERAPEVLAHRERVELPWNDEVGSSTDEQGMPNPSQTVP 153 Query: 96 RDVVRILDLGTGTGAVCLALLKESP-FFKGVGVDISCKALEIAKSNAVTNGVSERFDTL- 153 RD RIL++G GTG + LA+ E P K V DI A+ +A+ N V G+ E + Sbjct: 154 RDAARILEIGCGTGCISLAIASERPGQVKIVATDIDPSAVALAQRNRVALGLDEETISFR 213 Query: 154 QSDWFSSVE----GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209 + D V FDV+VSNPPYI ++ L EV F+P ++LDGG DGL YR + Sbjct: 214 EGDLAEPVAPDELAGFDVLVSNPPYIPRAVMADLPREVSAFEPELALDGGADGLQIYRRL 273 Query: 210 ADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 S L GL + E+ + + L V+ +D G RVLL Sbjct: 274 LRLASMALRPGGLLACELYEESLEEAAELARGADLVDVSIVEDLAGRPRVLL 325 >gi|182623922|ref|ZP_02951710.1| methyltransferase, HemK family [Clostridium perfringens D str. JGS1721] gi|177910815|gb|EDT73169.1| methyltransferase, HemK family [Clostridium perfringens D str. JGS1721] Length = 587 Score = 99.4 bits (246), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 68/221 (30%), Positives = 114/221 (51%), Gaps = 8/221 (3%) Query: 44 RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103 R LK + ILG +F + + PR +TE++V+ L I++ + + D Sbjct: 365 RKLKM-PMQYILGTCEFMGLDFYVEEGVLIPRGDTEIIVEEVLN----NIDEDAEINVCD 419 Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-- 161 L G+GA+ L+L VDI ++ + N +S+R ++SD S V Sbjct: 420 LCCGSGAIGLSLANYRKNIIVDLVDIDDIPEKVTRKNIRELELSKRCGFIKSDLLSEVIK 479 Query: 162 -EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220 +D++VSNPPYI + +++ L +V+D++P ++LDGG DGL YR I D L ++ Sbjct: 480 KGNKYDILVSNPPYIRTEVINTLMEDVKDYEPHLALDGGEDGLIFYRRIIDESLEVLKEN 539 Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 G+ + EIG++Q DV + + + V KD G DR ++ Sbjct: 540 GILAFEIGHDQGEDVKNLMIEKGYYDVKVIKDLAGLDRCVI 580 >gi|150010265|ref|YP_001305008.1| putative protoporphyrinogen oxidase [Parabacteroides distasonis ATCC 8503] gi|255012466|ref|ZP_05284592.1| putative protoporphyrinogen oxidase [Bacteroides sp. 2_1_7] gi|149938689|gb|ABR45386.1| putative protoporphyrinogen oxidase [Parabacteroides distasonis ATCC 8503] Length = 318 Score = 99.4 bits (246), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 84/290 (28%), Positives = 126/290 (43%), Gaps = 48/290 (16%) Query: 13 RVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSDT 71 RV GLS+HQ+++ L D ++F + IV L+ ++ I +LG DFY + ++ D Sbjct: 31 RVCGLSTHQLLLGKGKELSDTEKFKIKE-IVEGLRLYKPIQYLLGIADFYGMEFKVTPDV 89 Query: 72 FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131 PRPET LV+ + + RILD+GTG+G + ++L K P + VDIS Sbjct: 90 LIPRPETAELVERIITDY-----QGQAPRILDIGTGSGCIAISLAKHLPEAEVAAVDISP 144 Query: 132 KALEIAKSNAVTNGVS---------------------------ERFDTLQSDWFSSVE-- 162 +AL +A+ NA N VS RF ++ F+ V+ Sbjct: 145 EALAVAEENARMNQVSVSFHELDILSEGYSSFMQEKQNFHVRETRFSCTRNKIFTYVKLK 204 Query: 163 -----------GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL-DGGIDGLSHYRTIA 210 G + IVSNPPYI + V + +P ++L D L YR IA Sbjct: 205 SHTEETEASLIGSLNCIVSNPPYIMYREKATMEANVLENEPHLALFVPDDDPLLFYRAIA 264 Query: 211 DGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 RHL + G EI + V + V +D G DR++ Sbjct: 265 RFGQRHLAEGGHLYFEINALCGKETVAMLRQENYTEVELIQDLYGKDRIV 314 >gi|167754863|ref|ZP_02426990.1| hypothetical protein CLORAM_00367 [Clostridium ramosum DSM 1402] gi|237735405|ref|ZP_04565886.1| modification methylase [Mollicutes bacterium D7] gi|167704913|gb|EDS19492.1| hypothetical protein CLORAM_00367 [Clostridium ramosum DSM 1402] gi|229381150|gb|EEO31241.1| modification methylase [Coprobacillus sp. D7] Length = 285 Score = 99.0 bits (245), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 72/223 (32%), Positives = 112/223 (50%), Gaps = 18/223 (8%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110 I I G +F+ ++ D PR ETE LV++ L + + + D+GTG+GA Sbjct: 69 IQYIKGVENFFGRDFKVNEDVLIPRYETEELVENILYRIDDYFAEYQSITLCDVGTGSGA 128 Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDV 167 + +L E P K DIS KA+ +AK NA G + F D L+ + ++ D+ Sbjct: 129 IATSLALEEPRLKVFATDISLKAVTVAKDNAKNLGANIEFMVGDMLEPLLENEIK--VDI 186 Query: 168 IVSNPPYI-ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE 226 VSNPPYI + ++ + V+D +P ++L GG DGL YR I GV L + L + E Sbjct: 187 FVSNPPYIPQEQEIEAM---VKDNEPHVALFGGNDGLYFYRKIFQGVEPLLQERALLAFE 243 Query: 227 IGYNQKVDVVRIFESR-KLFLVN----AFKDYGGNDRVLLFCR 264 +G++Q+ + E+ + + N KD G DR+L R Sbjct: 244 MGFDQR----ELMEAALQEYFPNDPHEIIKDINGKDRMLFIYR 282 >gi|228474914|ref|ZP_04059643.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Staphylococcus hominis SK119] gi|228271146|gb|EEK12526.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Staphylococcus hominis SK119] Length = 278 Score = 99.0 bits (245), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 71/226 (31%), Positives = 111/226 (49%), Gaps = 12/226 (5%) Query: 41 AIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR 100 A+ R L E I I+G++ FY +L ++S PRPETE ++ L +D Sbjct: 59 ALDRMLLGEPIQYIVGFQSFYGYQLQVNSHCLIPRPETEEVMLHFLEHC------KDGST 112 Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDW 157 I D+GTG+GA+ + L K +P + D+ LE+A NA RF + L+ Sbjct: 113 IADIGTGSGAIAIVLKKLNPTLNVIATDLIEDTLEVASDNAHQLKADIRFLKGNALKPLI 172 Query: 158 FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217 +++ D ++SNPPYI+ + + V ++P I+L +G Y I D + + L Sbjct: 173 KENIK--LDGLISNPPYIDQTEMKDMEDTVVKYEPHIALFAEDEGYEIYEMILDDLPKVL 230 Query: 218 NKDGLCSVEIGYNQ-KVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262 NK + EIGYNQ ++ RI VN KD G +R++ F Sbjct: 231 NKGAYVTFEIGYNQGEILKARIINKYPHVNVNLLKDINGLNRMISF 276 >gi|269121055|ref|YP_003309232.1| modification methylase, HemK family [Sebaldella termitidis ATCC 33386] gi|268614933|gb|ACZ09301.1| modification methylase, HemK family [Sebaldella termitidis ATCC 33386] Length = 361 Score = 99.0 bits (245), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 70/212 (33%), Positives = 104/212 (49%), Gaps = 12/212 (5%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV--RILDLGTGT 108 + +L +FY ++ PR ETE++V+ AL E +D ILD+G G+ Sbjct: 148 LQYLLNEEEFYGRPFYINKGVLIPRNETEIVVERALQ------ELKDTAAPNILDIGAGS 201 Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSN-AVTNGVSERFDTLQSDWFSSVE-GLFD 166 G + + + KE P K +G+DIS ALEIA N + + +F L+S+ F V FD Sbjct: 202 GVISITIAKEKPDSKILGIDISDNALEIANKNKGLLKADNVKF--LKSNLFQEVNYHSFD 259 Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE 226 +I+SNPPYI + L +VR +P +L +GL Y I+ S +L G E Sbjct: 260 MIISNPPYIPKSEYETLSDDVRMHEPEEALTAENEGLFFYYEISKNASDYLKNGGRLIFE 319 Query: 227 IGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258 GYNQ + I + + FKD G +R Sbjct: 320 CGYNQAEIIESIMKETGYKNIEIFKDLNGINR 351 >gi|119486657|ref|ZP_01620707.1| Modification methylase HemK [Lyngbya sp. PCC 8106] gi|119456274|gb|EAW37406.1| Modification methylase HemK [Lyngbya sp. PCC 8106] Length = 304 Score = 99.0 bits (245), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 70/223 (31%), Positives = 110/223 (49%), Gaps = 25/223 (11%) Query: 54 ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV--------RILDLG 105 + GWR F LT+S PRPETEL+VD + I+++ + +DLG Sbjct: 88 VAGWRHF---GLTVSPAVLIPRPETELIVDLVVGL----IQRQSQICDQNLQLGHWVDLG 140 Query: 106 TGTGAVCLAL---LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162 TG+GA+ L L L E+ VD S +AL IA+ NA G ++R Q W+ ++ Sbjct: 141 TGSGAIALGLASVLTEASIH---AVDCSREALAIAQKNAQDLGFADRIAFYQGRWWEPLD 197 Query: 163 ---GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 G +VSNPPYI + ++ L EV +P ++LDGG GL + + +L+ Sbjct: 198 CLRGKVSGMVSNPPYIPTAMLSTLQPEVARHEPHLALDGGESGLDCIQHLVQTAPAYLHS 257 Query: 220 DGLCSVEIGYNQKVDVVRIFESRKLFL-VNAFKDYGGNDRVLL 261 G+ VE+ Q VV + + + + + +D G +R +L Sbjct: 258 GGVWLVEMMAGQGEQVVELLKDQGCYTQIEQIRDLAGIERFVL 300 >gi|314935934|ref|ZP_07843284.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Staphylococcus hominis subsp. hominis C80] gi|313655940|gb|EFS19682.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Staphylococcus hominis subsp. hominis C80] Length = 278 Score = 99.0 bits (245), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 71/226 (31%), Positives = 111/226 (49%), Gaps = 12/226 (5%) Query: 41 AIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR 100 A+ R L E I I+G++ FY +L ++S PRPETE ++ L +D Sbjct: 59 ALDRMLLGEPIQYIVGFQSFYGYQLQVNSHCLIPRPETEEVMLHFLEHC------KDGST 112 Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDW 157 I D+GTG+GA+ + L K +P + D+ LE+A NA RF + L+ Sbjct: 113 IADIGTGSGAIAIVLKKLNPTLNVIATDLIEDTLEVASDNAHQLKADIRFLKGNALKPLI 172 Query: 158 FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217 +++ D ++SNPPYI+ + + V ++P I+L +G Y I D + + L Sbjct: 173 KENIK--LDGLISNPPYIDQTEMKDMEDTVVKYEPHIALFAEDEGYEIYEMILDDLPKVL 230 Query: 218 NKDGLCSVEIGYNQ-KVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262 NK + EIGYNQ ++ RI VN KD G +R++ F Sbjct: 231 NKGAYVTFEIGYNQGEILKARIINKYPHVNVNLLKDINGLNRMISF 276 >gi|288576249|ref|ZP_05978460.2| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Neisseria mucosa ATCC 25996] gi|288565901|gb|EFC87461.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Neisseria mucosa ATCC 25996] Length = 301 Score = 99.0 bits (245), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 61/156 (39%), Positives = 89/156 (57%), Gaps = 6/156 (3%) Query: 79 ELLVDSALAFSLPRIEKRDVV-RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137 ELL DS P IE ++V R LDL TG+G + + + P + VD+S ALE+A Sbjct: 117 ELLGDSLT----PWIEHPELVHRALDLCTGSGCLAVQMAHHYPAAEIDAVDLSLDALEVA 172 Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197 N G+ ER + + +D F +EG +D+IVSNPPY+++ VD L E +P ++L Sbjct: 173 AINVEDYGLEERINLIHTDLFEGLEGAYDLIVSNPPYVDAESVDMLPDEYL-HEPELALG 231 Query: 198 GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233 G DGL R I +++LN G+ VEIG+N+ V Sbjct: 232 SGEDGLDATRQILLHAAKYLNPKGVLLVEIGHNRDV 267 >gi|188587461|ref|YP_001919006.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Natranaerobius thermophilus JW/NM-WN-LF] gi|179352148|gb|ACB86418.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Natranaerobius thermophilus JW/NM-WN-LF] Length = 321 Score = 99.0 bits (245), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 75/281 (26%), Positives = 138/281 (49%), Gaps = 22/281 (7%) Query: 4 LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63 ++++ L + +++ P+ L Q L +++ + + G R+F + Sbjct: 37 IKEADFLLAFILDWDRSKLLAYPEKHLSSGQYKELKELVIKRSEGTPYAYLTGKREFMGL 96 Query: 64 RLTLSSDTFEPRPETELLVDSAL--------------AFSLPRIEKRDVVRILDLGTGTG 109 T++ + PRP+TE++V+ AL L E ++ILD+ TG+G Sbjct: 97 EFTVTENVLIPRPDTEVVVEFALNCLGKIILKDNPNNKKELQFNELNSPIKILDICTGSG 156 Query: 110 AVCLALLKESPFFKGVGV-----DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EG 163 + L++ G + DIS KALEIA NA G+ + ++SD FS+ + Sbjct: 157 NIGLSIAYYFNKMYGQNLELTLSDISDKALEIAHINASNLGLLSQCKFVKSDLFSNTSDD 216 Query: 164 LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223 + +I +NPPYI S L EV+ +P +L G DGL +Y+ I+ + ++L++DG+ Sbjct: 217 NYRLITANPPYISSKHYSTLSKEVK-LEPAHALLAGEDGLYYYKKISQQIKKYLSQDGVL 275 Query: 224 SVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 EIG +Q+ +V + ++ L +V + +D G R++ R Sbjct: 276 IFEIGEDQQEEVENMLSTQNL-VVTSEQDLAGRPRLIAASR 315 >gi|116515053|ref|YP_802682.1| hypothetical protein BCc_112 [Buchnera aphidicola str. Cc (Cinara cedri)] gi|116256907|gb|ABJ90589.1| N5-glutamine methyltransferase, release factors activity modulator [Buchnera aphidicola str. Cc (Cinara cedri)] Length = 277 Score = 99.0 bits (245), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 81/263 (30%), Positives = 126/263 (47%), Gaps = 14/263 (5%) Query: 1 MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60 + A DS LC V +S + + + L N + R + E I I+ ++F Sbjct: 18 LTAKLDSEVLLCFVLKISKKDLFYKNKKKIKIKYLLILNNFLFRRVLGEPIAYIIKKKEF 77 Query: 61 YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120 +++ L +SS PRPETE+LV+ L L ++ IL+LGTG+GA+ LAL E+ Sbjct: 78 WSLSLFVSSYVLIPRPETEILVEQVL---LKVSSTKN--SILELGTGSGAISLALASENS 132 Query: 121 FFKGVGVDISCKALEIAKSNA-VTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYI--E 176 K +G DIS AL IAK NA N + +F + S+WF ++ F +IV NPPY+ + Sbjct: 133 QLKIIGTDISLYALLIAKYNADKLNLNNVKF--IYSNWFQNIPIKKFHIIVCNPPYLSRK 190 Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236 C + F+P +L G G+ I ++ G +E Y Q V Sbjct: 191 DFKNSCSNI---SFEPYSALVSGNSGIECIEYIIKNSFQYFVSSGWLYIEHCYKQTKLVH 247 Query: 237 RIFESRKLFLVNAFKDYGGNDRV 259 IF++ + + KDY +R+ Sbjct: 248 NIFKNNFFINIVSVKDYSNRNRI 270 >gi|284046082|ref|YP_003396422.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Conexibacter woesei DSM 14684] gi|283950303|gb|ADB53047.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Conexibacter woesei DSM 14684] Length = 320 Score = 99.0 bits (245), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 81/259 (31%), Positives = 125/259 (48%), Gaps = 12/259 (4%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L G + + + P+ VL + ++ R E + I G R F ++ L Sbjct: 74 DAELLLADALGATRTSLHLHPERVLVADESARFAASVARRRAREPVAYIRGTRGFRHIDL 133 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 T+ + PRPETELLV+ +A LPR R+ D+GTG+GAV LAL E P V Sbjct: 134 TVDARVLVPRPETELLVE--VALGLPR-----GARVADVGTGSGAVALALKHERPDLAVV 186 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185 D+S AL +A++NA ++ F Q D + V+G D I+SNPPY+ + L Sbjct: 187 ATDLSADALAVAQANAAALRLAVAF--AQGDLLAGVDGPLDAILSNPPYVPDGDREGLEP 244 Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245 EV +P +L G DGL R +A + + + E+G Q V + + + Sbjct: 245 EVAVHEPSQALFAGGDGLDVLRRLA---TEAAARAPFVAFEVGAGQAPAVGALLRAAGML 301 Query: 246 LVNAFKDYGGNDRVLLFCR 264 + A +D G +RV++ R Sbjct: 302 RITAHRDLAGIERVVVGER 320 >gi|116513792|ref|YP_812698.1| methylase of polypeptide chain release factor [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|116093107|gb|ABJ58260.1| Methylase of polypeptide chain release factor [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] Length = 273 Score = 99.0 bits (245), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 83/259 (32%), Positives = 129/259 (49%), Gaps = 19/259 (7%) Query: 11 LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70 L GL+ Q + D L D + + R K +S ILG+ F RL ++ Sbjct: 21 LAERLGLTPSQFQLKQDMELSDAEVKQARKDMKRLAKGDSPQYILGYAWFLGYRLRVAKG 80 Query: 71 TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV----- 125 PR ETE LV+ ALA ++ D V LDLGTG+G + +AL KE+ +G+ Sbjct: 81 VLIPRFETEELVEWALA----HLQNGDTV--LDLGTGSGNIMVALAKEAES-RGIKDLHF 133 Query: 126 -GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184 D+ L I++ N + G+ T +++ + G FD+I+SNPPYI+ + + Sbjct: 134 YASDVKDTPLRISEENFLDYGLD--VTTRKANVLLGL-GKFDLIISNPPYIKPSEKNVMD 190 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 V +P +L GG DGL+ YR A+ V HLN G +E G++++ ++ +F + KL Sbjct: 191 KGVLANEPEEALFGGQDGLAFYRKFAEEVRDHLNSGGRFFMEFGFSEEDELKAMF-AEKL 249 Query: 245 --FLVNAFKDYGGNDRVLL 261 F V +D G R+L Sbjct: 250 PDFKVEFRRDMAGKPRMLF 268 >gi|229158890|ref|ZP_04286947.1| Protein hemK [Bacillus cereus ATCC 4342] gi|228624501|gb|EEK81271.1| Protein hemK [Bacillus cereus ATCC 4342] Length = 283 Score = 99.0 bits (245), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 79/264 (29%), Positives = 123/264 (46%), Gaps = 25/264 (9%) Query: 11 LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70 LC V + ++++ + Q I + ++ I ++G FY ++ + Sbjct: 28 LCHVLKTNRTGLLMNMREEITVEQEKSFAEFIHKHVEGIPIQYMIGHEMFYGRSFFVNEE 87 Query: 71 TFEPRPETELLVDSALAFSLPRIEKR---DVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 PRPETE L+ L RIE+ + + + D+GTG+GA+ + L E+ V Sbjct: 88 VLIPRPETEELIVGVLE----RIERHFGDEKLHVADIGTGSGAISITLALENKNLHVYTV 143 Query: 128 DISCKALEIAKSNAVTNGVSERF--DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185 DI+ +++E+AK NA T G F L S ++ + + L DV+VSNPPYI L Sbjct: 144 DIAQESIEVAKENAKTLGAEVTFYHGDLLSPFYETGQKL-DVVVSNPPYIPEEDWRGLSP 202 Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245 V++ +P+ +L GG DGL YR D + L K + + EIG Q DV K Sbjct: 203 VVKEHEPKRALVGGEDGLDFYRRFMDELPNVLQKKAIVAFEIGVGQGEDV-------KGL 255 Query: 246 LVNAFK--------DYGGNDRVLL 261 L AF D G DR++ Sbjct: 256 LQQAFPHAHVEVVFDINGKDRMVF 279 >gi|212550575|ref|YP_002308892.1| protein methyltransferase HemK [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] gi|212548813|dbj|BAG83481.1| protein methyltransferase HemK [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] Length = 303 Score = 99.0 bits (245), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 76/215 (35%), Positives = 104/215 (48%), Gaps = 9/215 (4%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110 I ILG +FY ++L ++ + PRPETE LVD L + ILD+GTG+G Sbjct: 79 IQYILGETEFYGIQLVVNENVLIPRPETEELVD--LIIKKIALHNFSHCTILDIGTGSGC 136 Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL----FD 166 + LAL K P K +DIS KALE+A+ NA N + F Q D FS + F Sbjct: 137 IALALAKYLPDTKIYALDISGKALEVARQNAQMNEMKVIF--FQQDIFSPLTQFCPTSFS 194 Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID-GLSHYRTIADGVSRHLNKDGLCSV 225 VIVSNPPYI L + ++P +L + L Y IAD ++L +GL Sbjct: 195 VIVSNPPYITISEKKNLLPNILHYEPHQALFVPKEFPLIFYDRIADIGKQYLTANGLLFF 254 Query: 226 EIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 E V + + + V FKD G DR++ Sbjct: 255 ETHAFFGQTVSSMLQKKGYQNVELFKDISGKDRMV 289 >gi|298369402|ref|ZP_06980720.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Neisseria sp. oral taxon 014 str. F0314] gi|298283405|gb|EFI24892.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Neisseria sp. oral taxon 014 str. F0314] Length = 299 Score = 99.0 bits (245), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 55/145 (37%), Positives = 84/145 (57%), Gaps = 2/145 (1%) Query: 90 LPRIEKRDVV-RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148 LP IE ++V R LDL TG+G + + + P + VD+S ALE+A N G+ E Sbjct: 122 LPWIEHNELVHRALDLCTGSGCLAIQMAHHYPAAEIDAVDLSLDALEVAAVNIEEYGLEE 181 Query: 149 RFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208 R + +D F ++ +D+IVSNPPY+++ V+ L E R +P ++L G DGL R Sbjct: 182 RIRLIHTDLFEGLDDTYDLIVSNPPYVDAESVETLPDEYR-HEPELALGSGTDGLDATRR 240 Query: 209 IADGVSRHLNKDGLCSVEIGYNQKV 233 I ++HLN G+ VEIG+N+ + Sbjct: 241 IILHAAKHLNPRGVLLVEIGHNRDI 265 >gi|255066453|ref|ZP_05318308.1| protein-(glutamine-N5) methyltransferase [Neisseria sicca ATCC 29256] gi|255049333|gb|EET44797.1| protein-(glutamine-N5) methyltransferase [Neisseria sicca ATCC 29256] Length = 299 Score = 99.0 bits (245), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 56/144 (38%), Positives = 84/144 (58%), Gaps = 2/144 (1%) Query: 91 PRIEKRDVV-RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 P IE ++V R LDL TG+G + + + P + VD+S ALE+A N G+ ER Sbjct: 123 PWIEHPELVHRALDLCTGSGCLAIQMAHHYPAAEIDAVDLSLDALEVAAINIEDYGLEER 182 Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209 + + +D F +EG +D+IVSNPPY+++ VD L E +P ++L G DGL R I Sbjct: 183 INLIHTDLFEGLEGTYDLIVSNPPYVDAESVDMLPDEYL-HEPELALGSGEDGLDATRQI 241 Query: 210 ADGVSRHLNKDGLCSVEIGYNQKV 233 +++LN G+ VEIG+N+ V Sbjct: 242 LLHAAKYLNPKGVLLVEIGHNRDV 265 >gi|261420782|ref|YP_003254464.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Geobacillus sp. Y412MC61] gi|319768452|ref|YP_004133953.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Geobacillus sp. Y412MC52] gi|261377239|gb|ACX79982.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Geobacillus sp. Y412MC61] gi|317113318|gb|ADU95810.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Geobacillus sp. Y412MC52] Length = 293 Score = 99.0 bits (245), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 71/225 (31%), Positives = 107/225 (47%), Gaps = 8/225 (3%) Query: 45 SLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRI-EKRDVVRILD 103 ++ H I ++G+ FY ++ PRPETE LV L +PR+ R + ++D Sbjct: 65 AVDHVPIQYLIGYESFYGRPFLVNRHVLIPRPETEELVLGVLK-RVPRLFAGRKRIDVVD 123 Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSS 160 +GTG+GA+ + L E+ DIS AL +A+ NA G + F D LQ + Sbjct: 124 VGTGSGAIAVTLALENKALSVTATDISEAALAVARENARRLGANVSFLCGDLLQP--IMA 181 Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220 + DV+VSNPPYI L V++++P +L GG DGL YR A + L Sbjct: 182 MGWTVDVVVSNPPYIPETDAAMLSPVVKNYEPHTALFGGRDGLDFYRRFARELPLVLGAP 241 Query: 221 GLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDYGGNDRVLLFCR 264 L + E+G Q V + ++ V D G DR++ R Sbjct: 242 ALAAFEVGAGQGEAVAALLDAAFPEAEVEVDFDLNGKDRMVYMTR 286 >gi|311070219|ref|YP_003975142.1| glutamine methylase [Bacillus atrophaeus 1942] gi|310870736|gb|ADP34211.1| glutamine methylase [Bacillus atrophaeus 1942] Length = 288 Score = 98.6 bits (244), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 78/250 (31%), Positives = 117/250 (46%), Gaps = 26/250 (10%) Query: 32 DRQRFFLT-------NAIVRSLKHESIHR-------ILGWRDFYNVRLTLSSDTFEPRPE 77 DR + F + + + R +H +H+ I+G FY ++ D PRPE Sbjct: 36 DRSKLFASLQDPISEDELYRFKRHVEMHKEGVPVQYIIGKEAFYGRVFIVNDDVLIPRPE 95 Query: 78 TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137 TE +V L + + +R++D+GTG+GA+ + L E+ F +DIS +AL+IA Sbjct: 96 TEEVVLHLLEKQKRVFPEGEPLRVIDVGTGSGAIAVTLALENKHFSVSAIDISKEALQIA 155 Query: 138 KSNAVTNGVSERFDTLQSDWFSSV--EGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194 NA G + D + D EG D+IVSNPPYI + L VR +P Sbjct: 156 AENAERLGA--KVDFFEGDLLEPFIKEGKKADIIVSNPPYISEEEMADLSNVVRFHEPLH 213 Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ----KVDVVRIFESRKLFLVNAF 250 +L G DGL Y+ + + R +N L EIG+ Q K +R F + + V Sbjct: 214 ALTDGGDGLRFYKRFMEDIPRVMNDKALVVFEIGWKQGDAVKEMFLRTFPNAE---VEVL 270 Query: 251 KDYGGNDRVL 260 KD G DR + Sbjct: 271 KDINGKDRTV 280 >gi|167750128|ref|ZP_02422255.1| hypothetical protein EUBSIR_01097 [Eubacterium siraeum DSM 15702] gi|167656871|gb|EDS01001.1| hypothetical protein EUBSIR_01097 [Eubacterium siraeum DSM 15702] Length = 275 Score = 98.6 bits (244), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 84/268 (31%), Positives = 124/268 (46%), Gaps = 19/268 (7%) Query: 1 MQALRDSHSFLCR--VTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWR 58 ++++ D F R V+ +S ++ P + D Q + R E + ILG Sbjct: 14 LESVTDDAYFEARQIVSEISGGKM---PFEEITDAQLIECEDKAKRRKTGEPLQYILGNW 70 Query: 59 DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118 +FY + + PRPETELL D A A K +DL +G+G + + + E Sbjct: 71 EFYGRKYFVGEGVLIPRPETELLCDIAKAHL-----KNTGGTAVDLCSGSGCIAVTVALE 125 Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF-SSVEGLFD-----VIVSNP 172 + K VG++IS KA N N + D F ++ G F+ ++SNP Sbjct: 126 ANV-KAVGIEISDKAYGYFLKNIEQNKAERSVTAINGDIFDKNILGRFEDDSLYAVLSNP 184 Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232 PYI S + L EV F+P ++L GG DGL YR + + L GL +VEIG Q Sbjct: 185 PYISSADMKALQKEV-TFEPELALFGGEDGLDFYRRLIPMWAGKLRSGGLFAVEIGEEQG 243 Query: 233 VDVVRIFESRKLFLVNAFKDYGGNDRVL 260 V RIFE F +DY G+DR++ Sbjct: 244 QAVSRIFEGAG-FNPEIIRDYSGHDRIV 270 >gi|312793257|ref|YP_004026180.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Caldicellulosiruptor kristjanssonii 177R1B] gi|312180397|gb|ADQ40567.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Caldicellulosiruptor kristjanssonii 177R1B] Length = 288 Score = 98.6 bits (244), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 74/253 (29%), Positives = 125/253 (49%), Gaps = 12/253 (4%) Query: 13 RVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTF 72 ++ G+ +VI++ + + + NAI R L+ + F + + Sbjct: 40 QILGIDKAEVILNKGLPVRQDKYEKIVNAISRYLQGYPLQYCTNKAFFMGFEFYVDENVL 99 Query: 73 EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF--KGVGVDIS 130 PR +TE+LV+ A+ + R + LD+GTG+G + +AL K F K + VDIS Sbjct: 100 IPRFDTEVLVEVAIEI----FKGRKNLYFLDIGTGSGCIAVALCK---FLDCKVLAVDIS 152 Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGL-FDVIVSNPPYIESVIVDCLGLEVR 188 +ALE+A+ NA NGV + ++S+ F ++ + L FD I+SNPPYI + L V Sbjct: 153 ERALEVARKNAKLNGVENKISFIRSNLFENIPQNLKFDAILSNPPYISKDEIFELDQRVL 212 Query: 189 DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN 248 +P I+L DG ++ IA+ +L G E+G++Q +V RI E + + Sbjct: 213 K-EPHIALFSKEDGFWFFKEIANKAKLYLKDSGYIIFEVGFSQAKEVKRILEQKGYKNIK 271 Query: 249 AFKDYGGNDRVLL 261 + KD +R + Sbjct: 272 SRKDLNNIERCIF 284 >gi|229823149|ref|ZP_04449218.1| hypothetical protein GCWU000282_00446 [Catonella morbi ATCC 51271] gi|229787315|gb|EEP23429.1| hypothetical protein GCWU000282_00446 [Catonella morbi ATCC 51271] Length = 287 Score = 98.6 bits (244), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 71/228 (31%), Positives = 115/228 (50%), Gaps = 28/228 (12%) Query: 44 RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR-DVVRIL 102 R + HE + ILG+ DF R ++ PR +T ++D A ++ +EK + + L Sbjct: 67 RLVTHEPLQYILGYEDFDGRRFKVTPAVLIPREDTAGILDLAASW----LEKHPNASQAL 122 Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS--DWFSS 160 DLGTG+G + ++L P + D+S +AL IAK N +LQ+ DW + Sbjct: 123 DLGTGSGILAISLALRHPQLQLTAGDLSPEALAIAKENG---------KSLQATIDWLVT 173 Query: 161 --VEGL-----FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213 +GL +D+++SNPPYI +D + V+ ++P ++L GL+ YR +A + Sbjct: 174 DICQGLPQDRTYDLVISNPPYISETELDLMDESVKRYEPSMALFAEQGGLAFYRQLAKQI 233 Query: 214 SRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF---LVNAFKDYGGNDR 258 +L +EIG+ Q VV IF R+ F V+ +D G DR Sbjct: 234 GPYLKPIACLILEIGFRQGQAVVDIF--RQAFPQAKVSCHQDLNGRDR 279 >gi|229199454|ref|ZP_04326117.1| Protein hemK [Bacillus cereus m1293] gi|228584030|gb|EEK42185.1| Protein hemK [Bacillus cereus m1293] Length = 283 Score = 98.6 bits (244), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 78/264 (29%), Positives = 123/264 (46%), Gaps = 25/264 (9%) Query: 11 LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70 LC V + ++++ + Q I + ++ I ++G FY ++ + Sbjct: 28 LCHVLKTNRTGLLMNMREEITAEQEKSFAEFIHKHVEGIPIQYMIGHEMFYGRSFFVNEE 87 Query: 71 TFEPRPETELLVDSALAFSLPRIEKR---DVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 PRPETE L+ L RIE+ + + + D+GTG+GA+ + L E+ V Sbjct: 88 VLIPRPETEELIVGVLE----RIERHFGDEKLHVADIGTGSGAISITLALENKNLHMYTV 143 Query: 128 DISCKALEIAKSNAVTNGVSERF--DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185 DI+ +++E+AK NA T G F L S ++ + + L DV+VSNPPYI L Sbjct: 144 DIAQESIEVAKENAKTLGAEVTFYHGDLLSPFYETGQKL-DVVVSNPPYIPEEDWRGLSP 202 Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245 V++ +P+ +L GG DGL YR + + L K + + EIG Q DV K Sbjct: 203 VVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEIGVGQGEDV-------KGL 255 Query: 246 LVNAFK--------DYGGNDRVLL 261 L AF D G DR++ Sbjct: 256 LQQAFPHAHVEVVFDINGKDRMVF 279 >gi|258544632|ref|ZP_05704866.1| protein methyltransferase HemK [Cardiobacterium hominis ATCC 15826] gi|258520140|gb|EEV88999.1| protein methyltransferase HemK [Cardiobacterium hominis ATCC 15826] Length = 276 Score = 98.6 bits (244), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 76/257 (29%), Positives = 120/257 (46%), Gaps = 13/257 (5%) Query: 6 DSHSFLCRVTGLS-SHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 ++ +TGLS + Q I DP+ L+ Q+ L R E + +LG + F + Sbjct: 23 ETRHLAAHITGLSPTAQRIHDPE--LEPAQQQALDALAARLHAGEPLAYLLGHQPFCGLD 80 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L +S T PR ++E+LV+ AL + ++DLGTG+GA+ LA+ P + Sbjct: 81 LKVSRATLIPRSDSEILVERALHH----LRDLHAPTVIDLGTGSGALALAIATARPDARI 136 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183 D S +AL IA+ NA + ++ LQ+DW + D+I+SNPPYI + + Sbjct: 137 TATDQSAEALAIAQENAHAHRLTN-LTFLQADWLAPFAADCADLILSNPPYIAA---NDP 192 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV-VRIFESR 242 L +P +L DG TI R+L +G +E G+ Q + R S Sbjct: 193 HLAALTHEPPSALIAAADGYRDLYTIMQQAPRNLKPNGWLLMEHGWQQGEKLRARATSSG 252 Query: 243 KLFLVNAFKDYGGNDRV 259 + +DY G DR+ Sbjct: 253 DWHNIATHQDYAGRDRI 269 >gi|266621434|ref|ZP_06114369.1| protein-(glutamine-N5) methyltransferase [Clostridium hathewayi DSM 13479] gi|288866873|gb|EFC99171.1| protein-(glutamine-N5) methyltransferase [Clostridium hathewayi DSM 13479] Length = 326 Score = 98.6 bits (244), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 80/251 (31%), Positives = 115/251 (45%), Gaps = 48/251 (19%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALA-FSLPRIEKRDVVRILDLGTGTG 109 + +I G R+F + +++ PR +TE LV+ L F E +LDL TG+G Sbjct: 77 LQQITGSREFMGLEFSVNEYVLIPRQDTETLVEQVLKDFQGKNPE------VLDLCTGSG 130 Query: 110 AVCLALLKESPFFKGVGVDISCKALEIAKSNA---------------------------- 141 + ++L + + DIS KAL +AK NA Sbjct: 131 CIGISLSILGGWQEVTLADISLKALLVAKKNAEDLMTAKLHPIRLSSEGQKESPWRWRLT 190 Query: 142 --------VTNGVSERFDTLQSDWFSSVEG----LFDVIVSNPPYIESVIVDCLGLEVRD 189 T GV + ++SD FSS+ G FDVIVSNPPYI + +++ L EVRD Sbjct: 191 SELPGMEDKTAGV-QNITLVESDLFSSLSGDGKRKFDVIVSNPPYIPTNVIEELEPEVRD 249 Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249 +PR++LDG DGL YR +A +L G EIGY+Q V + V Sbjct: 250 HEPRLALDGMEDGLYFYRRLAAECGSYLKPGGTVYFEIGYDQGQAVSGLLREAGFQNVLV 309 Query: 250 FKDYGGNDRVL 260 ++D G DRV+ Sbjct: 310 YQDAPGLDRVV 320 >gi|325282554|ref|YP_004255095.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Deinococcus proteolyticus MRP] gi|324314363|gb|ADY25478.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Deinococcus proteolyticus MRP] Length = 284 Score = 98.2 bits (243), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 73/223 (32%), Positives = 105/223 (47%), Gaps = 8/223 (3%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ + L TGL ++ L R L + R L E + +LG ++ VRL Sbjct: 23 DAEALLEAGTGLGRTARLLRAQEALHPETRQRLDALLARRLAREPLQYLLGEVEWGGVRL 82 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 PRPETE L+ LA P + V++ D+GTGTGA+ L P + Sbjct: 83 RCDPRALIPRPETEWLLH--LALHDPATAR--AVQVADIGTGTGALALGWKAARPQTRVT 138 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLG 184 D+S AL +A+ NA NG+ F Q D + + G F +I+SNPPY+ L Sbjct: 139 ATDLSADALALARENAALNGLDVSF--YQGDLLAPLTGQTFGLILSNPPYLPDQDRGTLA 196 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227 EV D DP ++L GG DGL+ R +A L G+ +E+ Sbjct: 197 PEV-DHDPALALYGGPDGLTLARRLAAQAPARLAAGGVLWLEL 238 >gi|319648108|ref|ZP_08002325.1| YwkE protein [Bacillus sp. BT1B_CT2] gi|317389743|gb|EFV70553.1| YwkE protein [Bacillus sp. BT1B_CT2] Length = 288 Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 71/223 (31%), Positives = 107/223 (47%), Gaps = 12/223 (5%) Query: 46 LKHESI--HRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103 L H+ + I G FY + +++ PRPETE +V++ L+ + D ++ +D Sbjct: 62 LHHQGVPVQYITGKESFYGRKFSVNEHVLIPRPETEEVVEAVLSEAERVFHGTDRLKAVD 121 Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-- 161 +GTG+GA+ + L ESP F DIS +AL A+ NA + + + D L D + Sbjct: 122 VGTGSGAIAVTLALESPRFSVTATDISEQALSTARHNA--DRLGAKVDFLCGDLLEPLIA 179 Query: 162 -EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220 + DVIVSNPPYI + L VR +P +L G DGL Y+ + + Sbjct: 180 RQKKADVIVSNPPYISEEDMRTLSDVVRLHEPAGALTDGADGLQFYKRFMKEIPSVIADQ 239 Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFL---VNAFKDYGGNDRVL 260 L EIG+ Q V +F + F V KD G DR++ Sbjct: 240 ALVVFEIGWTQGNAVKDMF--HRFFPDADVRVKKDLNGKDRIV 280 >gi|308800168|ref|XP_003074865.1| HemK protein methyltransferase (IC) [Ostreococcus tauri] gi|116061414|emb|CAL52132.1| HemK protein methyltransferase (IC) [Ostreococcus tauri] Length = 394 Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 78/222 (35%), Positives = 110/222 (49%), Gaps = 29/222 (13%) Query: 57 WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIE-KRDVVRI---------LDLGT 106 WRD LT+S PRPETELL+D A L R+E + D LDLGT Sbjct: 168 WRDL---ELTVSDAVLIPRPETELLIDFAEEI-LNRLELQLDGTSTWNHLLSSPWLDLGT 223 Query: 107 GTGAVCLALLKE--------SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 G+GA+ +A+ + P + D S +A+E+AK NA T GV + L WF Sbjct: 224 GSGALAIAMAQALQSRGRETVPLV--LATDKSIEAVEVAKHNATTCGVQDVIQVLNGSWF 281 Query: 159 SSVEG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID-GLSHYRTIADGVSR 215 ++ F I+SNPPYI + ++ L EV +PR++LDGG+ GL H +I ++ Sbjct: 282 EPIDDSIRFAGILSNPPYIPTELLGSLQPEVYLHEPRLALDGGVSGGLLHITSICAKITD 341 Query: 216 HLNKDGLCSVEI-GYNQKVDVVRIFESRKLF-LVNAFKDYGG 255 L GL ++E G Q V R+ E + F + DY G Sbjct: 342 FLLPGGLFAIETHGAEQAKFVGRLLEQTRAFDDIRTRADYAG 383 >gi|300867729|ref|ZP_07112374.1| HemK family modification methylase [Oscillatoria sp. PCC 6506] gi|300334312|emb|CBN57546.1| HemK family modification methylase [Oscillatoria sp. PCC 6506] Length = 311 Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 72/222 (32%), Positives = 104/222 (46%), Gaps = 17/222 (7%) Query: 57 WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPR--IEKRDV-VRILDLGTGTGAVCL 113 WR F L ++ PRPETEL++D A+ + R IE + +DLGTG+GA+ L Sbjct: 92 WRHF---SLKVTPAVLIPRPETELIIDLAVEAAKHRSQIESLNAKSHWVDLGTGSGAIAL 148 Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----------G 163 L + VD S A+ +A+ NA G+S+R Q W+ +E G Sbjct: 149 GLAESLTNTLIHAVDYSSDAIAVARQNADNLGLSDRIQFYQGSWWEPLESAIIDGLPLRG 208 Query: 164 LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223 +V+NPPYI S +V L EV +P ++LDGG DGL R + +L G+ Sbjct: 209 QISGMVANPPYIPSSLVPNLQPEVAKHEPHLALDGGSDGLDCIRHLVATAPDYLRSGGVW 268 Query: 224 SVEIGYNQKVDVVRIFESRKLFL-VNAFKDYGGNDRVLLFCR 264 VE+ Q VV I S + + + D G R + R Sbjct: 269 LVEMMEGQAEVVVEILHSAGSYRDIGIYADLAGIKRFAIAFR 310 >gi|289435804|ref|YP_003465676.1| modification methylase, HemK family [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289172048|emb|CBH28594.1| modification methylase, HemK family [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 283 Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 79/247 (31%), Positives = 111/247 (44%), Gaps = 10/247 (4%) Query: 16 GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75 GLS ++ ++ + L+ R L E + IL FY ++ D PR Sbjct: 34 GLSRSELWMEINRELEPNHEKQFQADFERYLSGEPVQYILKTAPFYGYDFLVTEDVLIPR 93 Query: 76 PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135 PETE LV A AF ++K + +LD+ TG+G + +AL K P DIS AL Sbjct: 94 PETEELVACAEAF----LKKNPLPTVLDVCTGSGIIAIALKKAFPKVLVTASDISSPALA 149 Query: 136 IAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDP 192 IAK NA+ RF D L+S F FD++++NPPYI + V +P Sbjct: 150 IAKKNALLLNADVRFVETDLLES--FKQNGERFDMVLANPPYISEAEKAAMSDYVLKNEP 207 Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE-SRKLFLVNAFK 251 ++L DGL+ Y + + LN VEIGY Q V +F+ S V K Sbjct: 208 ALALFAENDGLAIYERFVEDLQYVLNPSFWVGVEIGYTQGEKVKDLFQKSYPHSTVVIHK 267 Query: 252 DYGGNDR 258 D DR Sbjct: 268 DINSKDR 274 >gi|167041536|gb|ABZ06285.1| putative RNA methylase family UPF0020 [uncultured marine microorganism HF4000_008B14] Length = 289 Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 79/251 (31%), Positives = 129/251 (51%), Gaps = 12/251 (4%) Query: 17 LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRP 76 L SHQ + ++ +Q L + R LK E + IL +++FY V L ++SD PRP Sbjct: 42 LFSHQ-----EDGVNAQQERELAQIVERRLKREPLAYILAYKEFYGVNLLVNSDVLIPRP 96 Query: 77 ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136 ETE +V+ AL +L +E ++V I D+GTGTGA+ + L P + +D + L++ Sbjct: 97 ETETMVEHALFMALMGMETTELV-IADVGTGTGAIAINLAIHLPAARIYAIDAADAVLDV 155 Query: 137 AKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL 196 A N + V++R + D + D+IV+N PYI + + L E++ ++P +L Sbjct: 156 ASHNIRAHNVADRIKLAKGDLLEPLPEPVDLIVANLPYIPTSRIPTLQPEIQ-WEPIAAL 214 Query: 197 DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF---LVNAFKDY 253 DGG DGL R + L ++G+ +E+ Q V + SR+LF + +D Sbjct: 215 DGGGDGLDLIRRLMSQAPDKLKENGIILLELDPEQVSAVEEL--SRQLFPEATTSIEQDL 272 Query: 254 GGNDRVLLFCR 264 DRV + R Sbjct: 273 AHLDRVFVINR 283 >gi|332881259|ref|ZP_08448909.1| protein-(glutamine-N5) methyltransferase [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332680635|gb|EGJ53582.1| protein-(glutamine-N5) methyltransferase [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 271 Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 80/259 (30%), Positives = 120/259 (46%), Gaps = 19/259 (7%) Query: 16 GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75 GL+ + + D +R L N + R + E + +LG DF +++ PR Sbjct: 21 GLTPIDICMGRDRTFSLEERRELENIVKRLSQKEPVQYVLGQTDFCGRTFSVAPGVLVPR 80 Query: 76 PETELLVD------SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129 PETE L + A FS P I LD+GTG+G + + L +E P + +DI Sbjct: 81 PETEELTEWIIQDEKASGFSSPDI--------LDIGTGSGCIAITLSQELPQAQVSAIDI 132 Query: 130 SCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLE 186 S +AL IA+ NA G + F D L S L+D+IVSNPPY+ + + Sbjct: 133 STQALAIARKNAERLGAAVDFRCQDILDSPSKDQDSPLWDIIVSNPPYVCEHEREDMEEN 192 Query: 187 VRDFDPRISL-DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245 V ++P +L D L YR I + + L + G VEI + R+F+S L Sbjct: 193 VLRYEPSQALFVPDHDPLLFYRAIGEYAVKTLKEGGRLYVEINRAYGWETTRLFQSLGLR 252 Query: 246 LVNAFKDYGGNDRVLLFCR 264 V KD+ N+R ++ CR Sbjct: 253 DVTLKKDFYDNER-MIRCR 270 >gi|78777517|ref|YP_393832.1| modification methylase HemK [Sulfurimonas denitrificans DSM 1251] gi|78498057|gb|ABB44597.1| Modification methylase HemK [Sulfurimonas denitrificans DSM 1251] Length = 276 Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 70/217 (32%), Positives = 108/217 (49%), Gaps = 12/217 (5%) Query: 44 RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIE-KRDVVRIL 102 R K+E + I+G FY+ + S PRPETELL+D L IE K + I+ Sbjct: 64 RRAKNEPLEYIVGSVSFYSEEFYIDSGALIPRPETELLIDEVLK----NIEDKNSPLNIV 119 Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162 ++G G+G + + L K P K + VDIS AL +A+ N + +R + ++ Sbjct: 120 EVGVGSGIISIILAKSLPNAKFIAVDISQAALGVARKNIEKFSLEDRIELRHGSLLEPIK 179 Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVR-DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221 D +VSNPPY I D + LE ++P+ +L GG G + + DGV + + Sbjct: 180 EKIDYLVSNPPY----IADDVSLESNLSYEPQNALFGGSVGDEIIKELLDGVLKA--EIN 233 Query: 222 LCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258 L S E+GY+QK + ++ L + +KDY DR Sbjct: 234 LFSCEMGYDQKDKIQNYLNNKPLKSLVFYKDYSDFDR 270 >gi|328555407|gb|AEB25899.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Bacillus amyloliquefaciens TA208] gi|328913778|gb|AEB65374.1| glutamine methylase of release factor 1 [Bacillus amyloliquefaciens LL3] Length = 286 Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 82/253 (32%), Positives = 117/253 (46%), Gaps = 23/253 (9%) Query: 24 VDPDSVLDDRQRFFLTNAIVRSLKHESIHR-------ILGWRDFYNVRLTLSSDTFEPRP 76 +D +L + Q + + R +H +H+ I+G FY ++ D PRP Sbjct: 35 MDRSKLLANLQEPVGEDELYRFRRHVEMHKEGVPIQYIIGKEQFYGREFFVNDDVLIPRP 94 Query: 77 ETELLVDSALAFSLPRIEKR-----DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131 ETE +V F L +KR + + ++D+GTG+GA+ + L E F DIS Sbjct: 95 ETEEVV-----FHLLDKQKRVFSEGERLNVIDIGTGSGAIAVTLALECGHFSVAASDISK 149 Query: 132 KALEIAKSNAVTNGVSERFDTLQSDW---FSSVEGLFDVIVSNPPYIESVIVDCLGLEVR 188 +AL++A+ NA G RF LQ D F S D+IVSNPPYI + L VR Sbjct: 150 EALQVAERNAQNLGADVRF--LQGDLLTPFISSGKKADIIVSNPPYISEEEMADLSDIVR 207 Query: 189 DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF-ESRKLFLV 247 +P +L G DGL Y+ + + + L EIGYNQ V +F S V Sbjct: 208 FHEPLHALTDGGDGLKFYKRFMEDLPLVMKDKALVVFEIGYNQGKAVEDLFRHSFPNAEV 267 Query: 248 NAFKDYGGNDRVL 260 KD G DR + Sbjct: 268 EVVKDINGKDRTV 280 >gi|118445015|ref|YP_879015.1| methyltransferase [Clostridium novyi NT] gi|118135471|gb|ABK62515.1| Methyltransferase [Clostridium novyi NT] Length = 284 Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 77/262 (29%), Positives = 125/262 (47%), Gaps = 9/262 (3%) Query: 4 LRDSHSFLCRVTGLSSHQVIVDPDSVL-DDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 + D+ L +V +I++ + +L D + FL +R K + ILG +F Sbjct: 23 MLDAQLLLQKVLKKDKLFIILNRNEILSKDEEEEFLKLINLRKDKM-PVKYILGECEFMG 81 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + + PR +TE+LV+ + I++ + RI D+ G+GA+ +++ K Sbjct: 82 LNFYVKEGVLIPRADTEILVEEVIK----EIKENNYNRICDVCCGSGAIGVSIGKYMENS 137 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVI 179 DIS A+E+ N + +R +SD + FDVIVSNPPYI+ + Sbjct: 138 TVDCYDISDIAIEVTGKNIERFLLKDRLTVEKSDLLTVAIKQNKKFDVIVSNPPYIKEEV 197 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 + L +V+D++P I+L GGIDGL YR I L +GL + EIGY+Q V + Sbjct: 198 IPTLMEDVKDYEPYIALCGGIDGLDFYRKITVQSLEILENNGLLAFEIGYDQAEAVKELL 257 Query: 240 ESRKLFLVNAFKDYGGNDRVLL 261 V D G +RV++ Sbjct: 258 MESGFTDVKVINDLEGLNRVVI 279 >gi|326335033|ref|ZP_08201233.1| protein-(glutamine-N5) methyltransferase [Capnocytophaga sp. oral taxon 338 str. F0234] gi|325692838|gb|EGD34777.1| protein-(glutamine-N5) methyltransferase [Capnocytophaga sp. oral taxon 338 str. F0234] Length = 281 Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 71/218 (32%), Positives = 111/218 (50%), Gaps = 9/218 (4%) Query: 47 KHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGT 106 K+ I I FY + ++ + PR ETE LV+ + L K ++ILD+GT Sbjct: 66 KNVPIQYIFHRTYFYGMSFFVNDNVLIPRQETEELVE----WILRETPKNTPLQILDIGT 121 Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF--SSVEGL 164 G+G + +AL K P +DIS KALE+A+ NA N VS F LQ D + + + Sbjct: 122 GSGVIAIALKKYLPEATVFALDISEKALEVAQRNAKENKVSVHF--LQEDILKVTHLGRI 179 Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG-LSHYRTIADGVSRHLNKDGLC 223 FD+IVSNPPY+ + + L V + +P ++L D L Y IA+ +HL+K G Sbjct: 180 FDIIVSNPPYVRNSEKREIALNVLEHEPHLALFVPDDNPLLFYEKIAELAHQHLSKQGKL 239 Query: 224 SVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 E+ +++++ + V KD +DR++L Sbjct: 240 FFEMNQYLAKEMIQMLNRKGFRKVVLQKDLSNHDRMIL 277 >gi|124023898|ref|YP_001018205.1| protein methyltransferase [Prochlorococcus marinus str. MIT 9303] gi|123964184|gb|ABM78940.1| putative protein methyltransferase [Prochlorococcus marinus str. MIT 9303] Length = 306 Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 77/243 (31%), Positives = 117/243 (48%), Gaps = 9/243 (3%) Query: 21 QVIVDPD-SVLDDRQRFFLTNAIVRSLKHE-SIHRILGWRDFYNVRLTLSSDTFEPRPET 78 Q+ +DP SVL +R L + L H + ++G + +V L +S+ PR ET Sbjct: 45 QLYLDPRRSVLLERSLDQLAMIWKQHLDHHIPLQHLIGCCPWRDVELEVSAAALIPRQET 104 Query: 79 ELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAK 138 ELLVD F+L ++ DLGTG+GA+ +AL + P ++G VD S +AL +AK Sbjct: 105 ELLVD----FALQAFARKPFGCWADLGTGSGALAVALARALPVWRGHAVDCSIEALALAK 160 Query: 139 SNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195 N + Q W+ + G F +++ NPPYI ++ L VRD +P ++ Sbjct: 161 RNLQRLAPHALWQLHQGSWWEPLRPWWGEFSLVLVNPPYIPEAVMAQLEPVVRDHEPHLA 220 Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGG 255 L GG DGL R I G + L G +E ++Q V+ + + L V D G Sbjct: 221 LCGGADGLVATRQIIVGAMQALEPGGWLFLEHHHDQSDAVLALMRQQGLENVEYKSDLLG 280 Query: 256 NDR 258 R Sbjct: 281 VRR 283 >gi|320008548|gb|ADW03398.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptomyces flavogriseus ATCC 33331] Length = 281 Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 76/241 (31%), Positives = 114/241 (47%), Gaps = 13/241 (5%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ V G+ + PD+ D R++ T I R E + I G F + L Sbjct: 26 DAEELAAFVHGVKRGALHNVPDADFD--ARYWET--IARREAREPLQHITGRAFFRYLEL 81 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR--ILDLGTGTGAVCLALLKESPFFK 123 + F PRPETE S + +++ + DVV I+DL TG+GA+ LA+ +E P + Sbjct: 82 QVGPGVFVPRPETE----SVVGWAIDAVRAMDVVEPLIVDLCTGSGAIALAMAQEVPRSR 137 Query: 124 GVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182 V++S AL + NA + V+ R D L + ++G D+++SNPPYI + Sbjct: 138 VHAVELSEDALRWTRKNAEGSRVTVHRGDALSA--LPELDGQVDLVISNPPYIPLTEWEY 195 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 + E RD DP+++L G DGL R I R L GL +E Q V IF Sbjct: 196 VAPEARDHDPQMALFSGEDGLDTIRGIERTAHRLLRPGGLVVIEHADTQGGQVPWIFTEE 255 Query: 243 K 243 + Sbjct: 256 R 256 >gi|239944288|ref|ZP_04696225.1| putative methyltransferase [Streptomyces roseosporus NRRL 15998] gi|239990743|ref|ZP_04711407.1| putative methyltransferase [Streptomyces roseosporus NRRL 11379] gi|291447756|ref|ZP_06587146.1| methyltransferase [Streptomyces roseosporus NRRL 15998] gi|291350703|gb|EFE77607.1| methyltransferase [Streptomyces roseosporus NRRL 15998] Length = 281 Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 75/241 (31%), Positives = 113/241 (46%), Gaps = 13/241 (5%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ V G+ + PDS D R++ T + R E + I G F + L Sbjct: 26 DAEELAAFVHGVKRGALHTVPDSDFD--ARYWET--VARREAREPLQHITGRAFFRYLEL 81 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR--ILDLGTGTGAVCLALLKESPFFK 123 + F PRPETE S + +++ + DVV ++DL TG+GA+ LA+ +E P K Sbjct: 82 QVGPGVFVPRPETE----SVVGWAIDAVRAMDVVEPVVVDLCTGSGAIALAMAQEVPRSK 137 Query: 124 GVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182 V++S AL + NA + V+ + D L + ++G D+++SNPPYI + Sbjct: 138 VHAVELSEDALRWTRKNAEGSRVTVHKGDALSA--LPELDGQVDLVISNPPYIPLTEWEY 195 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 + E RD DP ++L G DGL R I R L GL +E Q V IF Sbjct: 196 VAPEARDHDPEMALFSGEDGLDTIRGIERTAHRLLRPGGLVVIEHADTQGGQVPWIFTEE 255 Query: 243 K 243 + Sbjct: 256 R 256 >gi|182435968|ref|YP_001823687.1| putative methyltransferase [Streptomyces griseus subsp. griseus NBRC 13350] gi|326776592|ref|ZP_08235857.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptomyces cf. griseus XylebKG-1] gi|178464484|dbj|BAG19004.1| putative methyltransferase [Streptomyces griseus subsp. griseus NBRC 13350] gi|326656925|gb|EGE41771.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptomyces cf. griseus XylebKG-1] Length = 281 Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 75/241 (31%), Positives = 113/241 (46%), Gaps = 13/241 (5%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ V G+ + PD+ D R++ T I R E + I G F + L Sbjct: 26 DAEELAAFVHGVKRGALHTVPDTDFD--ARYWET--IARREAREPLQHITGRAFFRYLEL 81 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR--ILDLGTGTGAVCLALLKESPFFK 123 + F PRPETE S + +++ + DVV ++DL TG+GA+ LA+ +E P + Sbjct: 82 QVGPGVFVPRPETE----SVVGWAIDAVRAMDVVEPVVVDLCTGSGAIALAMAQEVPRSR 137 Query: 124 GVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182 V++S AL + NA + V+ R D L + ++G D+++SNPPYI + Sbjct: 138 VHAVELSEDALRWTRKNAEGSRVTVHRGDALSA--LPELDGQVDLVISNPPYIPLTEWEY 195 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 + E RD DP ++L G DGL R I R L GL +E Q V IF Sbjct: 196 VAPEARDHDPEMALFSGEDGLDTIRGIERTAHRLLRPGGLVVIEHADTQGGQVPWIFTEE 255 Query: 243 K 243 + Sbjct: 256 R 256 >gi|317487896|ref|ZP_07946488.1| hypothetical protein HMPREF1023_00186 [Eggerthella sp. 1_3_56FAA] gi|316913022|gb|EFV34539.1| hypothetical protein HMPREF1023_00186 [Eggerthella sp. 1_3_56FAA] Length = 331 Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 78/309 (25%), Positives = 126/309 (40%), Gaps = 55/309 (17%) Query: 7 SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66 + L TGLS ++ + + L +R L + R K E + I G F ++ + Sbjct: 16 AQWLLSEATGLSRIELYANFEQPLSMGERDVLRAYVTRRGKGEPLQYITGEVGFRHITVK 75 Query: 67 LSSDTFEPRPETELLVDSALAF-------------------------------------- 88 + PRPETE+LV ALA Sbjct: 76 VRPGVLIPRPETEVLVSEALALLPAAPKRVAQHAWSEDDLPPATWPEGEAGEQRPERTAD 135 Query: 89 -------SLPRIEKRDVVR------ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135 S P + + V + DL TG+G + ++ E P + + DI+ +A+ Sbjct: 136 QGVAEDGSTPGVAPGEPVPEPAPLLVADLCTGSGCIACSVAYEHPLARVMATDIAPEAVA 195 Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIESVIVDCLGLEVRDFD 191 +A+ N + +R + L D V+ G FD++VSNPPY+ + ++D + EV +F+ Sbjct: 196 LARDNVSALDLGDRVEVLSCDLGEGVDPALMGAFDLVVSNPPYVPTAVMDDIPREVAEFE 255 Query: 192 PRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK 251 P ++LDGG DGL R + R L + G + E+ + R+ E V Sbjct: 256 PALALDGGADGLDVLRRLLPWCRRALKEGGGFAFELHETCLGEAARLAEEAGFSDVRVTA 315 Query: 252 DYGGNDRVL 260 D G RVL Sbjct: 316 DLAGRPRVL 324 >gi|188996114|ref|YP_001930365.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Sulfurihydrogenibium sp. YO3AOP1] gi|188931181|gb|ACD65811.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Sulfurihydrogenibium sp. YO3AOP1] Length = 291 Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 75/267 (28%), Positives = 123/267 (46%), Gaps = 23/267 (8%) Query: 10 FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHES---IHRILGWRDFYNVRLT 66 + ++ L H +I PD + + +V S K S + + ++F+ + Sbjct: 29 LISKILNLPKHHIISYPDLEISEEDA---KKLVVLSEKRASGYPMAYLTKNKEFFGLDFY 85 Query: 67 LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI----LDLGTGTGAVCLALLKESPFF 122 + PRPETE+LV+ IEK + L++G G+G + ++LLK Sbjct: 86 IEEGVLIPRPETEILVEKV-------IEKLQNAKGELIGLEVGVGSGCISVSLLKNIKNL 138 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSER-----FDTLQSDWFSSVEGLFDVIVSNPPYIES 177 K +G+DIS KALEI + +A + V +R F+ + S D +VSNPPYI+ Sbjct: 139 KIIGIDISEKALEITEKSAKIHEVLDRLKLFKFNIMNGKMNSLNLPKLDFVVSNPPYIKE 198 Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237 L EV+ +P+ +L G +G Y I + + L +DG + E+G Q V Sbjct: 199 EDYQKLQKEVKK-EPKEALISGKEGTEFYEKIVNSLKDFLKEDGFFAFEVGIGQAEKVKL 257 Query: 238 IFESRKLFLVNAFKDYGGNDRVLLFCR 264 I E + +KD G DRV++ + Sbjct: 258 ILEDNGYKNIEIYKDLAGIDRVIIASK 284 >gi|229187554|ref|ZP_04314694.1| Protein hemK [Bacillus cereus BGSC 6E1] gi|228595921|gb|EEK53601.1| Protein hemK [Bacillus cereus BGSC 6E1] Length = 283 Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 78/264 (29%), Positives = 123/264 (46%), Gaps = 25/264 (9%) Query: 11 LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70 LC V + ++++ + Q T I + ++ I ++G FY ++ + Sbjct: 28 LCHVLKTNRTGLLMNMREEITAEQETSFTEFIHKHVEGIPIQYMIGHEMFYGRSFFVNEE 87 Query: 71 TFEPRPETELLVDSALAFSLPRIEKR---DVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 PRPETE L+ L RIE+ + + + D+GTG+GA+ + L E+ V Sbjct: 88 VLIPRPETEELIVGVLE----RIERHFGDEKLHVADIGTGSGAISITLALENKNLHVYTV 143 Query: 128 DISCKALEIAKSNAVTNGVSERF--DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185 DI+ +++E+AK NA T G F L ++ + + L DV+VSNPPYI L Sbjct: 144 DIAQESIEVAKENAKTLGAEVTFYHGDLLLPFYETGQKL-DVVVSNPPYIPEEDWRGLSP 202 Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245 V++ +P+ +L GG DGL YR + + L K + + EIG Q DV K Sbjct: 203 VVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEIGVGQGEDV-------KGL 255 Query: 246 LVNAFK--------DYGGNDRVLL 261 L AF D G DR++ Sbjct: 256 LQQAFPHAHVEVVFDINGKDRMVF 279 >gi|256839099|ref|ZP_05544609.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Parabacteroides sp. D13] gi|256740018|gb|EEU53342.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Parabacteroides sp. D13] Length = 318 Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 84/290 (28%), Positives = 126/290 (43%), Gaps = 48/290 (16%) Query: 13 RVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSDT 71 RV GLS+HQ+++ L D ++F + IV L+ ++ I +LG DFY + ++ D Sbjct: 31 RVCGLSTHQLLLGKGKELSDTEKFKIKE-IVEGLRLYKPIQYLLGIADFYGMEFKVTPDV 89 Query: 72 FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131 PRPET LV+ + + RILD+GTG+G + ++L K P + VDIS Sbjct: 90 LIPRPETAELVERIITDY-----QGQAPRILDIGTGSGCIAISLAKHLPKAEVAAVDISP 144 Query: 132 KALEIAKSNAVTNGVS---------------------------ERFDTLQSDWFSSVE-- 162 +AL +A+ NA N VS RF ++ F+ V+ Sbjct: 145 EALAMAEENARMNQVSVSFHELDILSEGYSSFMQEKQNFHVRETRFSCTRNKIFTYVKLK 204 Query: 163 -----------GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL-DGGIDGLSHYRTIA 210 G + IVSNPPYI + V + +P ++L D L YR IA Sbjct: 205 SHTEETEASLIGNLNCIVSNPPYIMYREKATMEANVLENEPHLALFVPDDDPLLFYRAIA 264 Query: 211 DGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 RHL + G EI + V + V +D G DR++ Sbjct: 265 RFGQRHLVEGGHLYFEINALCGKETVAMLRQENYTEVELIQDLYGKDRIV 314 >gi|184154904|ref|YP_001843244.1| protoporphyrinogen oxidase [Lactobacillus fermentum IFO 3956] gi|183226248|dbj|BAG26764.1| protoporphyrinogen oxidase [Lactobacillus fermentum IFO 3956] Length = 283 Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 61/201 (30%), Positives = 109/201 (54%), Gaps = 7/201 (3%) Query: 41 AIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR 100 AI R E ++G F+ + ++ D P ETE LV+ L S+P ++ ++ Sbjct: 62 AITRVASSEPAQYVVGKAPFFGRKFVVNRDVLIPETETEELVEWVLD-SMPADKE---LK 117 Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LDLGTG+G + + L E P ++ DIS AL+IA +N +G + + ++SD F+ Sbjct: 118 VLDLGTGSGVIGITLALERPKWQVTLSDISAAALKIALTNQRLHGTN--LNQVESDLFAR 175 Query: 161 V-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 + + F++IV+NPPY+ +D + EV +++P ++L +GL+ YR + HL Sbjct: 176 LGDQRFNLIVTNPPYVALSEIDEMDPEVLEYEPPLALFASENGLAFYRRLFAAAGEHLTP 235 Query: 220 DGLCSVEIGYNQKVDVVRIFE 240 G+ E G+ Q+ + R+ + Sbjct: 236 RGVLFGETGHRQEERIQRLLK 256 >gi|295698658|ref|YP_003603313.1| protein methyltransferase HemK (Protein-glutamine N-methyltransferase hemK) (Protein-(glutamine-N5) MTase hemK) [Candidatus Riesia pediculicola USDA] gi|291157335|gb|ADD79780.1| protein methyltransferase HemK (Protein-glutamine N-methyltransferase hemK) (Protein-(glutamine-N5) MTase hemK) [Candidatus Riesia pediculicola USDA] Length = 190 Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 72/191 (37%), Positives = 96/191 (50%), Gaps = 13/191 (6%) Query: 74 PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE--SPFFKGVGVDISC 131 PRPETE LV+ AL + K+ ++ILDLG G G + LAL KE S F VG DI Sbjct: 3 PRPETEHLVELALKLA----NKKKGLKILDLGAGAGPISLALAKELQSSFI--VGTDIDE 56 Query: 132 KALEIAKSNAVTNGVSERFDTLQSDW---FSSVEGLFDVIVSNPPYIESVIVDCLGLEVR 188 + IA++NA +N L+S+W F + FD+IVSNPPYI S CL Sbjct: 57 SVISIARANA-SNLSIRNVKFLKSNWFDCFHKKKKKFDLIVSNPPYI-SKDDPCLKFGDL 114 Query: 189 DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN 248 ++PR +L +GL R I + L K+G +E G NQ V F + Sbjct: 115 RYEPRRALISSNNGLFDIRIIVKDSKKFLKKNGWLLIEHGCNQGKKVREFFIKSSYQKIK 174 Query: 249 AFKDYGGNDRV 259 +DY G +RV Sbjct: 175 TIQDYSGKERV 185 >gi|160871959|ref|ZP_02062091.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Rickettsiella grylli] gi|159120758|gb|EDP46096.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Rickettsiella grylli] Length = 280 Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 78/262 (29%), Positives = 123/262 (46%), Gaps = 13/262 (4%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDP-DSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 A D+ V L+ Q+ P D ++ Q + + I R K E I +LG ++F+ Sbjct: 21 AYLDTELLFSEVLKLTRAQLHSQPLDRLITITQEKRIKHVIARRQKGEPIAYLLGRQEFW 80 Query: 62 NVRLTLSSDTFEPRPETELLVDSALA-FSL-PRIEKRDVVRILDLGTGTGAVCLALLKES 119 + L ++ D PRPETELLV+ L FS PR +I+DLGTG+ A+ +AL E Sbjct: 81 SFMLEVTPDVLIPRPETELLVEVLLENFSTEPR-------KIVDLGTGSAAISVALAWER 133 Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS--VEGLFDVIVSNPPYIES 177 P ++ + D S AL++AK N ++ + + + W + V FD I+SNPPY+ Sbjct: 134 PTWQLLATDCSMAALQVAKRN-ISRYHLQTIELRKGYWCEALNVGEKFDGILSNPPYLAR 192 Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237 ++P+ +L G GL I +L+ G+ +E G Q V Sbjct: 193 NDPHLQSEPGLAYEPKNALISGEKGLDDLERIIIQSREYLHPGGILFLEHGAQQATLVEE 252 Query: 238 IFESRKLFLVNAFKDYGGNDRV 259 F + + +KD G+ RV Sbjct: 253 FFLNYGYHEIKNYKDLAGHQRV 274 >gi|291542172|emb|CBL15282.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Ruminococcus bromii L2-63] Length = 280 Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 78/227 (34%), Positives = 115/227 (50%), Gaps = 18/227 (7%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101 I + + E + ILG F + PR +TE++V+ + F R +K+ V Sbjct: 61 IEKRISGEPLQYILGEWSFMGFDFKVGRGVLIPRDDTEVVVNLCIDFLENRTDKKTV--- 117 Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 DL +G+GA+ +AL K S + V+I A ++N N S + + +D Sbjct: 118 -DLCSGSGAIAVALDKISGA-EVTAVEIDETAFSYLETNVKENNSSVK--PVMADALEIC 173 Query: 162 E----GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217 E G FD+IVSNPPYI+S ++ L EVR +PR++LDGG DG YR I SR L Sbjct: 174 ETFADGEFDLIVSNPPYIKSADIETLQKEVR-LEPRLALDGGEDGCDFYREIVSRWSRKL 232 Query: 218 NKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK---DYGGNDRVLL 261 K G + E+G NQ D V+ + K F + FK D+GG R ++ Sbjct: 233 KKGGALAFELGENQ-ADAVKALMTDKGF--SDFKISLDFGGVQRAII 276 >gi|227514468|ref|ZP_03944517.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Lactobacillus fermentum ATCC 14931] gi|260663283|ref|ZP_05864174.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Lactobacillus fermentum 28-3-CHN] gi|227087154|gb|EEI22466.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Lactobacillus fermentum ATCC 14931] gi|260552135|gb|EEX25187.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Lactobacillus fermentum 28-3-CHN] Length = 283 Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 61/201 (30%), Positives = 109/201 (54%), Gaps = 7/201 (3%) Query: 41 AIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR 100 AI R E ++G F+ + ++ D P ETE LV+ L S+P ++ ++ Sbjct: 62 AITRVASSEPAQYVVGKAPFFGRKFVVNRDVLIPETETEELVEWVLD-SMPADKE---LK 117 Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LDLGTG+G + + L E P ++ DIS AL+IA +N +G + + ++SD F+ Sbjct: 118 VLDLGTGSGVIGITLALERPKWQVTLSDISAAALKIALTNQRLHGTN--LNQVESDLFAR 175 Query: 161 V-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 + + FD+IV+NPPY+ +D + EV +++P ++L +GL+ YR + HL Sbjct: 176 LGDQRFDLIVTNPPYVALSEIDEMDPEVLEYEPPLALFASENGLAFYRRLFAAAGEHLTP 235 Query: 220 DGLCSVEIGYNQKVDVVRIFE 240 G+ E G+ Q+ + ++ + Sbjct: 236 RGVLFGETGHRQEERIQQLLK 256 >gi|318042638|ref|ZP_07974594.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Synechococcus sp. CB0101] Length = 300 Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 71/205 (34%), Positives = 106/205 (51%), Gaps = 9/205 (4%) Query: 57 WRDFYNVRLTLSSDTFEPRPETELLVDSA---LAFSLPRIEKRDVVRILDLGTGTGAVCL 113 WRD L + PR ETELLV+ A L+ S + DLGTG+G + + Sbjct: 85 WRDL---ELEVQPGALIPRQETELLVELAEQRLSSSGDAPSGASPLHWADLGTGSGCLAV 141 Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVS 170 AL + P +GV VD S +AL +A+ N + + ER + Q +W++ + G D+++S Sbjct: 142 ALGRCWPGSRGVAVDQSSEALALAQRNLSKHHLLERVELRQGNWWAPLADWAGQLDLVIS 201 Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230 NPPYI + + L VRD +P ++LDGG DGL R IA G + HL G +E ++ Sbjct: 202 NPPYIPTAVWKQLEPTVRDHEPALALDGGGDGLEAIRAIAAGAAAHLAPGGWLLLEHHHD 261 Query: 231 QKVDVVRIFESRKLFLVNAFKDYGG 255 Q V+ + L V+ +D G Sbjct: 262 QSEAVLALLNGAGLEQVSPHRDLEG 286 >gi|291567205|dbj|BAI89477.1| N(5)-glutamine methyltransferase [Arthrospira platensis NIES-39] Length = 310 Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 69/215 (32%), Positives = 100/215 (46%), Gaps = 13/215 (6%) Query: 54 ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV------RILDLGTG 107 ++ WR+F L +S PRPETEL++D A+++ E + + +DLGTG Sbjct: 91 VVHWRNF---ALKVSPAVLIPRPETELIIDIAVSYHAASSEAINSICQPGSGNWVDLGTG 147 Query: 108 TGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS---SVEGL 164 +GA+ L L P VD S AL IA NA + G R Q W++ S++G Sbjct: 148 SGAIALGLASVFPQAMIHAVDCSWSALAIALENAQSLGYQNRVKFYQGSWWAPLHSLKGK 207 Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224 +V+NPPYI S + L EV +P +LDGG GL + + L G+ Sbjct: 208 VSGMVANPPYIPSQELPNLQPEVVYHEPHQALDGGESGLDCIHHLVQTAPQFLQPGGIWI 267 Query: 225 VEIGYNQKVDVVRIFESRKLFL-VNAFKDYGGNDR 258 VE+ Q V + ES + + D G DR Sbjct: 268 VEMMAGQGQAVTSMLESAGCYRDIKILPDLAGIDR 302 >gi|289432896|ref|YP_003462769.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Dehalococcoides sp. GT] gi|288946616|gb|ADC74313.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Dehalococcoides sp. GT] Length = 277 Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 71/260 (27%), Positives = 118/260 (45%), Gaps = 10/260 (3%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 +A +S L G+S Q+ ++ + L + + L+ E I G ++FY Sbjct: 21 EARLESEILLRHTLGISRVQLHLELERELKPEKETAYFETLQHRLEGEPSAYITGEKEFY 80 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 + PRPETE L++ AL + + I D+GTG+G + + L E Sbjct: 81 GRTFLVDKRVLIPRPETEHLIEKALQIA----RHYECPYIADIGTGSGVIAITLALELKD 136 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181 DIS ALE+A+ NA + +R Q D SS+ + D++ +N PY+ + Sbjct: 137 AYVYAADISEDALEVARQNAEEYRLEKRLSFYQGDLLSSLPEMVDILAANLPYVPKAEAE 196 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR-IFE 240 L + +PR++LDGG DGL YR + + L G +EIG +Q + + I + Sbjct: 197 LL-----NGEPRLALDGGKDGLDLYRRLIPFLPARLRPGGTALLEIGIHQSELLAKYIKD 251 Query: 241 SRKLFLVNAFKDYGGNDRVL 260 + + DY G R++ Sbjct: 252 TLPQASLEIISDYAGIPRIV 271 >gi|94984176|ref|YP_603540.1| HemK family modification methylase [Deinococcus geothermalis DSM 11300] gi|94554457|gb|ABF44371.1| modification methylase, HemK family [Deinococcus geothermalis DSM 11300] Length = 283 Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 63/173 (36%), Positives = 90/173 (52%), Gaps = 7/173 (4%) Query: 38 LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97 L N + R E + +LG ++ VRL PRPETE L L +L ++ Sbjct: 61 LVNLLRRRAAREPLQHLLGEVEWGGVRLRTDRRALVPRPETEWL----LHLALETLQGVS 116 Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 R+LD+GTGTGA+ L + P D+S AL +A+ NAV NG+ F L Sbjct: 117 APRVLDVGTGTGALALGIKAARPDASVTATDLSPDALTLARENAVLNGLDVVF--LAGRL 174 Query: 158 FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210 + + G FD+IVSNPPY+ + + + EVR FDP ++L G +GL R +A Sbjct: 175 LAGLSGPFDLIVSNPPYLPAADREQVDPEVR-FDPDLALYAGPEGLDVARPLA 226 >gi|325674111|ref|ZP_08153801.1| protein-(glutamine-N5) methyltransferase [Rhodococcus equi ATCC 33707] gi|325555376|gb|EGD25048.1| protein-(glutamine-N5) methyltransferase [Rhodococcus equi ATCC 33707] Length = 268 Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 70/212 (33%), Positives = 101/212 (47%), Gaps = 14/212 (6%) Query: 38 LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97 L I R + +LGW +F R+ + F PR TELLV A A +++ D Sbjct: 45 LARMIERRSAGVPLEHVLGWVEFCGRRIDIEQGVFVPRRRTELLVQEAAAL----VDQGD 100 Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG----VSERFDTL 153 VV +DL G+GAV +A+ +SP + D+ A+ A+ N G + FD L Sbjct: 101 VV--VDLCCGSGAVGVAIAADSPGVELHSADLDPVAVRCARRNVEPVGGHVHEGDLFDAL 158 Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213 + + G DV+V+N PY+ S + + E RD +PR +LDGG DGL R +A+ Sbjct: 159 PEE----LRGRVDVVVANVPYVPSDAIALMPPEARDHEPRAALDGGPDGLDVQRAVAEAA 214 Query: 214 SRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245 R L+ G VE +Q V IF L Sbjct: 215 PRWLSPGGRLLVETSIHQASSSVGIFTRAGLL 246 >gi|331001218|ref|ZP_08324844.1| protein-(glutamine-N5) methyltransferase [Parasutterella excrementihominis YIT 11859] gi|329568945|gb|EGG50741.1| protein-(glutamine-N5) methyltransferase [Parasutterella excrementihominis YIT 11859] Length = 247 Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 76/257 (29%), Positives = 114/257 (44%), Gaps = 13/257 (5%) Query: 10 FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69 L V G+ ++ D VL + L + + + + +LG ++F+ ++ Sbjct: 1 MLEHVCGMDKAAQLIHDDRVLSSDEERKLNDIAKKRSEGVPLPYLLGTQEFFARPFLVNP 60 Query: 70 DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129 PR +TE LV+ L LP+ + DLGTG+G + + E P D+ Sbjct: 61 SVLIPRSDTECLVE-WLIEHLPK-----NALVCDLGTGSGCIAATVALERPDLTVWASDL 114 Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSS--VEGLFDVIVSNPPYIESVIVDCLGLEV 187 S AL +A++N G + +Q W E FD ++SNPPYIE D L+ Sbjct: 115 SESALAVAQANCKALGADVKL--VQGSWLDPYPAELSFDAVISNPPYIER---DDKHLDA 169 Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLV 247 ++PR +L DGL YRTI + R K L +VE G+NQ V IFE Sbjct: 170 LRYEPRSALTDESDGLIAYRTILPQIKRKAPKVQLIAVEHGWNQGEAVRSIFEENGFKGS 229 Query: 248 NAFKDYGGNDRVLLFCR 264 F DYG N R + + Sbjct: 230 ATFWDYGNNPRFTTWIK 246 >gi|325830609|ref|ZP_08164030.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Eggerthella sp. HGA1] gi|325487355|gb|EGC89797.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Eggerthella sp. HGA1] Length = 345 Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 78/309 (25%), Positives = 126/309 (40%), Gaps = 55/309 (17%) Query: 7 SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66 + L TGLS ++ + + L +R L + R K E + I G F ++ + Sbjct: 30 AQWLLSEATGLSRIELYANFEQPLSMGERDVLRAYVTRRGKGEPLQYITGEVGFRHITVK 89 Query: 67 LSSDTFEPRPETELLVDSALAF-------------------------------------- 88 + PRPETE+LV ALA Sbjct: 90 VRPGVLIPRPETEVLVSEALALLPAAPKRVAQHAWSEDDLPPATWPEGEAGEQRPERTAD 149 Query: 89 -------SLPRIEKRDVVR------ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135 S P + + V + DL TG+G + ++ E P + + DI+ +A+ Sbjct: 150 QGVAEDGSTPGVAPGEPVPEPAPLLVADLCTGSGCIACSVAYEHPLARVMATDIAPEAVA 209 Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIESVIVDCLGLEVRDFD 191 +A+ N + +R + L D V+ G FD++VSNPPY+ + ++D + EV +F+ Sbjct: 210 LARDNVSALDLGDRVEVLSCDLGEGVDPALMGAFDLVVSNPPYVPTAVMDDIPREVAEFE 269 Query: 192 PRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK 251 P ++LDGG DGL R + R L + G + E+ + R+ E V Sbjct: 270 PALALDGGADGLDVLRRLLPWCRRALKEGGGFAFELHETCLGEAARLAEEAGFSDVRVTA 329 Query: 252 DYGGNDRVL 260 D G RVL Sbjct: 330 DLAGRPRVL 338 >gi|218283970|ref|ZP_03489831.1| hypothetical protein EUBIFOR_02427 [Eubacterium biforme DSM 3989] gi|218215487|gb|EEC89025.1| hypothetical protein EUBIFOR_02427 [Eubacterium biforme DSM 3989] Length = 282 Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 68/216 (31%), Positives = 107/216 (49%), Gaps = 8/216 (3%) Query: 49 ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108 E + +LG+ FY ++ D PRPETE LV L+ +D V + D+ TG+ Sbjct: 67 EPLGYVLGYECFYGYDFIVNEDVLIPRPETEELVGLVLSKFDDYFADKDHVNVFDVATGS 126 Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS-DWFSSVEGLFDV 167 GA+ + L E P + DIS +AL +A+ N G + F D F + D+ Sbjct: 127 GAIGITLNLEEPKMDVIASDISKEALVVAQKNNEKLGANVNFICGSMLDPFVDRDLHCDI 186 Query: 168 IVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227 +V NPPYI S + + V D++P ++L GG DGL YR + + LN+ + E+ Sbjct: 187 LVCNPPYIPS--EEKMEQSVVDYEPHVALFGGNDGLKFYRDVFEKAHLVLNEKAFLAFEM 244 Query: 228 GYNQKVDVVRIFESRKLF---LVNAFKDYGGNDRVL 260 G++Q + + +R+ F + KD G DR+L Sbjct: 245 GWDQGEALSNL--AREYFESATITVHKDMSGKDRML 278 >gi|89095601|ref|ZP_01168495.1| modification methylase, HemK family protein [Bacillus sp. NRRL B-14911] gi|89089347|gb|EAR68454.1| modification methylase, HemK family protein [Bacillus sp. NRRL B-14911] Length = 292 Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 77/268 (28%), Positives = 118/268 (44%), Gaps = 13/268 (4%) Query: 3 ALRDSHS---FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRD 59 A RDS++ L +S +++ + LD R + A+ + I+G + Sbjct: 22 AGRDSNAGEILLGHFLNMSRSRLLAEMREELDTRMQGAFKEAVQLHADGRPVQYIIGKEE 81 Query: 60 FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119 FY ++ + PRPETE LV AL + D+GTG+GA+ + L ES Sbjct: 82 FYGRTFLVNENVLIPRPETEELVLEALKRKEKLFGREAASAAADIGTGSGAIAVTLKLES 141 Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIE 176 P + D+ +L+ AK NA NG F D LQ F FD+I+SNPPYI Sbjct: 142 PDLQVTATDVYGPSLDTAKENADKNGAEIEFILGDLLQP--FIEESRKFDIIISNPPYIP 199 Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236 ++ + V + +P +L G DGL YR + + L + L E+G Q V Sbjct: 200 LSDMEGMSEVVTENEPHRALFAGQDGLDLYRRFMEELPLVLKEKSLVGFEVGAGQSKAVS 259 Query: 237 RIFESRKLFL---VNAFKDYGGNDRVLL 261 + R F ++ D G DR++ Sbjct: 260 ELL--RTAFPDANIDIVYDINGKDRMVF 285 >gi|315304794|ref|ZP_07874956.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Listeria ivanovii FSL F6-596] gi|313626834|gb|EFR95805.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Listeria ivanovii FSL F6-596] Length = 236 Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 73/217 (33%), Positives = 99/217 (45%), Gaps = 6/217 (2%) Query: 44 RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103 R L E + IL FY ++ D PRPETE LV A AF + K + +LD Sbjct: 15 RYLAGEPVQYILKTAPFYGYDFLVTEDVLIPRPETEELVACAEAF----LNKNPLPAVLD 70 Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF-DTLQSDWFSSVE 162 + TG+G + +AL K P DIS AL IAK NA+ RF +T + F Sbjct: 71 VCTGSGIIAIALKKAFPNIAMTAADISGPALAIAKKNALLLNADVRFVETDLLEAFKQHG 130 Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL 222 FD+I++NPPYI + + V +P ++L DG + Y + LN Sbjct: 131 EHFDMILANPPYISEAEKETMSDYVLKNEPALALFAENDGFAIYERFVADLKFVLNPSFW 190 Query: 223 CSVEIGYNQKVDVVRIFE-SRKLFLVNAFKDYGGNDR 258 VEIGY Q V ++F+ S V KD DR Sbjct: 191 VGVEIGYTQGEKVKQLFQKSYPHSAVVIHKDINSKDR 227 >gi|86738954|ref|YP_479354.1| HemK family modification methylase [Frankia sp. CcI3] gi|86565816|gb|ABD09625.1| modification methylase, HemK family [Frankia sp. CcI3] Length = 336 Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 60/200 (30%), Positives = 97/200 (48%), Gaps = 5/200 (2%) Query: 38 LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97 L + R + + +LGW +F+ +R+ + F PR TE LVD A+ R+ R Sbjct: 94 LAAMVRRRVAGLPLEHVLGWAEFHGLRIAVDPGVFVPRRRTEFLVDQAVE----RVAGRS 149 Query: 98 -VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 V ++DL G+GA+ +AL+ P + DI A+ A+ N + G L Sbjct: 150 RPVTVVDLCCGSGAMGVALVAALPGIEVHAADIEPAAVRCARRNLASAGGQVYDGDLYEP 209 Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216 + + G D++ +N PY+ + ++ + E R+ +PR++LDGG DGL R +A R Sbjct: 210 LPAVLRGHVDLLAANAPYVPTDAIELMPPEAREHEPRVALDGGADGLDVLRRVAAEAPRW 269 Query: 217 LNKDGLCSVEIGYNQKVDVV 236 L G VE G Q +V Sbjct: 270 LAPGGHLLVETGERQAASIV 289 >gi|259503693|ref|ZP_05746595.1| protein-(glutamine-N5) methyltransferase [Lactobacillus antri DSM 16041] gi|259168325|gb|EEW52820.1| protein-(glutamine-N5) methyltransferase [Lactobacillus antri DSM 16041] Length = 290 Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 62/200 (31%), Positives = 102/200 (51%), Gaps = 7/200 (3%) Query: 37 FLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR 96 + A+ + L H I+G FY + ++ P ET LV+ LA +LP + Sbjct: 60 WFQRAVAQLLNHVPAQYIVGQTSFYGRQFKVTPAVLVPEAETAELVEWVLA-ALPADRE- 117 Query: 97 DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 +R+LDLGTG+G + + L E P + DIS AL +A+ NA + ++ ++SD Sbjct: 118 --LRVLDLGTGSGVIGITLALERPCWSVTLSDISPAALAVARENAQRHQLA--LPLVESD 173 Query: 157 WFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215 F+++ + +DVIV+NPPYI+ + V + +PR++L GL Y + + R Sbjct: 174 LFANLADQRYDVIVTNPPYIDPAATALMDQAVLENEPRVALFADEHGLGFYHRLFEQAGR 233 Query: 216 HLNKDGLCSVEIGYNQKVDV 235 HL G E GY+Q+ + Sbjct: 234 HLRPSGQLFGETGYDQEQSI 253 >gi|315159265|gb|EFU03282.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis TX0312] Length = 277 Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 64/212 (30%), Positives = 105/212 (49%), Gaps = 17/212 (8%) Query: 54 ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113 +LG +FY ++ T PRPETE LV+ L + + ++D+GTGTGA+ + Sbjct: 73 LLGQAEFYGHSFIVNEHTLIPRPETEELVERCL-----KANPDTPLTVVDVGTGTGAIAI 127 Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVS 170 +L P ++ + +D+S KAL +AK NA G F + LQ + D+++S Sbjct: 128 SLKLARPNWRVIAIDLSEKALTVAKQNAQALGAGIEFYHGNGLQPVASEKI----DLLIS 183 Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230 NPPYI + VR ++P+ +L +GL+ Y+ + L DG EIG+ Sbjct: 184 NPPYISEQECYLMDASVRTYEPKTALFAENNGLALYQQLIHESQTMLKADGKIYFEIGFQ 243 Query: 231 QKVDVVRIFES---RKLFLVNAFKDYGGNDRV 259 Q + ++ + +K + KD GNDR+ Sbjct: 244 QGAALQKLLSAAYPQKTIKIE--KDLSGNDRL 273 >gi|332827555|gb|EGK00301.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Dysgonomonas gadei ATCC BAA-286] Length = 279 Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 73/252 (28%), Positives = 122/252 (48%), Gaps = 15/252 (5%) Query: 14 VTGLSSHQVIVDPD-SVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSDT 71 +T + QV +DP S + R + I++ LK +E I I+G +F+ + +++ + Sbjct: 32 ITKMPYPQVFIDPPVSTPELHNRI---DVILKRLKQYEPIQYIIGETEFFGLPFSVNENV 88 Query: 72 FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131 PRPETE LV+ L + K+ + +LD+GTG+GA+ +AL K DIS Sbjct: 89 LIPRPETEELVELIL-----KENKKSELSLLDIGTGSGAIAVALAKNMARTSVSAWDISY 143 Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFD 191 KAL++A N+ N F + + +D+IVSNPPY+ + + V +++ Sbjct: 144 KALDVAALNSKANSTDISFGRVDVLGDYPTDKKYDIIVSNPPYVLESEKEQMERNVLEYE 203 Query: 192 PRISL---DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN 248 P +L D + L Y+ IAD L G EI + + V++ E + V Sbjct: 204 PHTALFVTDN--NALLFYKRIADIALNLLTPAGRLYFEINQAKGAETVKMLEEKGFTEVA 261 Query: 249 AFKDYGGNDRVL 260 F+D DR++ Sbjct: 262 LFQDLSKKDRMI 273 >gi|297531577|ref|YP_003672852.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Geobacillus sp. C56-T3] gi|297254829|gb|ADI28275.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Geobacillus sp. C56-T3] Length = 293 Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 64/191 (33%), Positives = 95/191 (49%), Gaps = 7/191 (3%) Query: 45 SLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRI-EKRDVVRILD 103 ++ H I ++G+ FY ++ PRPETE LV L +PR+ R + ++D Sbjct: 65 AVDHVPIQYLIGYESFYGRPFLVNRHVLIPRPETEELVLGVLK-RVPRLFAGRKRIDVVD 123 Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSS 160 +GTG+GA+ + L E+ DIS AL +A+ NA G + F D LQ + Sbjct: 124 VGTGSGAIAVTLALENKALSVTATDISEAALAVARENARRLGANVSFLCGDLLQP--IMA 181 Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220 + DV+VSNPPYI L V++++P +L GG DGL YR A + L Sbjct: 182 MGWTVDVVVSNPPYIPETDAAMLSPVVKNYEPHTALFGGRDGLDFYRRFARELPLVLGAP 241 Query: 221 GLCSVEIGYNQ 231 L + E+G Q Sbjct: 242 ALAAFEVGAGQ 252 >gi|56421912|ref|YP_149230.1| protoporphyrinogen oxidase [Geobacillus kaustophilus HTA426] gi|56381754|dbj|BAD77662.1| protoporphyrinogen oxidase [Geobacillus kaustophilus HTA426] Length = 293 Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 64/191 (33%), Positives = 95/191 (49%), Gaps = 7/191 (3%) Query: 45 SLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRI-EKRDVVRILD 103 ++ H I ++G+ FY ++ PRPETE LV L +PR+ R + ++D Sbjct: 65 AVDHVPIQYLIGYESFYGRLFLVNRHVLIPRPETEELVLGVLK-RVPRLFAGRKRIDVVD 123 Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSS 160 +GTG+GA+ + L E+ DIS AL +A+ NA G + F D LQ + Sbjct: 124 VGTGSGAIAVTLALENKALSVTATDISEAALAVARENARRLGANVSFLCGDLLQP--IMA 181 Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220 + DV+VSNPPYI L V++++P +L GG DGL YR A + L Sbjct: 182 MGWTVDVVVSNPPYIPETDAAMLSPVVKNYEPHTALFGGRDGLDFYRRFARELPLVLGAP 241 Query: 221 GLCSVEIGYNQ 231 L + E+G Q Sbjct: 242 ALAAFEVGAGQ 252 >gi|325479469|gb|EGC82565.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Anaerococcus prevotii ACS-065-V-Col13] Length = 264 Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 68/212 (32%), Positives = 109/212 (51%), Gaps = 10/212 (4%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110 + +G +FY + + PR ETE++VD + + K+D +ILD+GTG+GA Sbjct: 58 LQYAIGEWEFYGLNFKVDKRALIPRFETEIIVD----YLIKSDWKKD--KILDIGTGSGA 111 Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170 + L+L K+ + + DIS AL++A+ N GV ++SD F + G FD+I+S Sbjct: 112 IALSLGKKLGKSEILASDISDDALDLARENKKRIGV-HNVSFIKSDIFEEISGKFDIIIS 170 Query: 171 NPPYIESVIVDCLGLEVRDF-DPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY 229 NPPYI D L+ R + +P+ +L +GL Y+ I + +LN G EIGY Sbjct: 171 NPPYINKS--DYENLDKRLYHEPKSALFAEENGLYFYKKIVSEANNYLNCGGKLVFEIGY 228 Query: 230 NQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 +QK + + + KDY DR ++ Sbjct: 229 DQKQSLFELLNKFDFKNLKCIKDYNDFDRFII 260 >gi|308175428|ref|YP_003922133.1| glutamine methylase of release factor 1 [Bacillus amyloliquefaciens DSM 7] gi|307608292|emb|CBI44663.1| glutamine methylase of release factor 1 [Bacillus amyloliquefaciens DSM 7] Length = 286 Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 82/253 (32%), Positives = 117/253 (46%), Gaps = 23/253 (9%) Query: 24 VDPDSVLDDRQRFFLTNAIVRSLKHESIHR-------ILGWRDFYNVRLTLSSDTFEPRP 76 +D +L + Q + + R +H +H+ I+G FY ++ D PRP Sbjct: 35 MDRSKLLANLQEPVGEDELYRFRRHVEMHKEGVPIQYIIGKEQFYGREFFVNFDVLIPRP 94 Query: 77 ETELLVDSALAFSLPRIEKR-----DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131 ETE +V F L +KR + + ++D+GTG+GA+ + L E F DIS Sbjct: 95 ETEEVV-----FHLLDKQKRVFSEGERLNVIDIGTGSGAIAVTLALECGHFSVAASDISK 149 Query: 132 KALEIAKSNAVTNGVSERFDTLQSDW---FSSVEGLFDVIVSNPPYIESVIVDCLGLEVR 188 +AL++A+ NA G RF LQ D F S D+IVSNPPYI + L VR Sbjct: 150 EALQVAERNAQNLGADVRF--LQGDLLTPFISSGKKADIIVSNPPYISEEEMADLSDIVR 207 Query: 189 DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF-ESRKLFLV 247 +P +L G DGL Y+ + + + L EIGYNQ V +F S V Sbjct: 208 FHEPLHALTDGGDGLKFYKRFMEDLPLVMKDKALVVFEIGYNQGKAVEDLFRHSFPNAEV 267 Query: 248 NAFKDYGGNDRVL 260 KD G DR + Sbjct: 268 EVVKDINGKDRTV 280 >gi|315637173|ref|ZP_07892395.1| protoporphyrinogen oxidase [Arcobacter butzleri JV22] gi|315478540|gb|EFU69251.1| protoporphyrinogen oxidase [Arcobacter butzleri JV22] Length = 277 Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 71/211 (33%), Positives = 116/211 (54%), Gaps = 13/211 (6%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG- 109 + I+G FY + + PRPETE+LV++A+ +K++ +++L++GTG+G Sbjct: 67 LEYIIGKASFYGEQFLIKEGVLIPRPETEILVENAVEI---LKDKKEPIKVLEIGTGSGI 123 Query: 110 -AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDV 167 +V LA+L E+ K + VDI+ KA+E+AK NA+ + V E+ D S+ + +V E ++ Sbjct: 124 ISVMLAMLIEN--IKIIAVDINPKAIELAKENAIKHNVLEKIDFRLSNLYENVNEDDINL 181 Query: 168 IVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227 +SNPPYI + L L V+ F+P +L GG G + I + LC E+ Sbjct: 182 TISNPPYIANDY--KLPLNVK-FEPSNALFGGNLGDELLKDIIKQTNDKKIPYLLC--EM 236 Query: 228 GYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258 GY+QK + F+ + N +KDY DR Sbjct: 237 GYDQKKSLEEYFKQFNVESYNFYKDYENFDR 267 >gi|312134917|ref|YP_004002255.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Caldicellulosiruptor owensensis OL] gi|311774968|gb|ADQ04455.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Caldicellulosiruptor owensensis OL] Length = 288 Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 73/252 (28%), Positives = 124/252 (49%), Gaps = 12/252 (4%) Query: 14 VTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFE 73 + + +VI++ D ++ + + NAI + L+ + F + + + Sbjct: 41 ILDIDKTEVILNKDLPVEQDKYEKIVNAISKYLQDYPLQYCTNKAFFMGLEFYVDENVLI 100 Query: 74 PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF--KGVGVDISC 131 PR +TE+LV+ A+ + R + LD+GTG+G + +AL + F K + VDIS Sbjct: 101 PRFDTEVLVEVAIEI----FKGRKNLYFLDIGTGSGCIAVALCR---FLDCKVLAVDISE 153 Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCLGLEVRD 189 +ALE+A+ NA NGV R ++S+ F ++ FD I+SNPPYI L +V Sbjct: 154 RALEVARKNAKLNGVENRVSFVRSNLFENIPKNLRFDAILSNPPYISESERFKLEKQVLK 213 Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249 +P I+L DGL ++ IA+ +L G E+G++Q +V RI E + + Sbjct: 214 -EPHIALFSKEDGLWFFKEIANKAKLYLKDGGYIIFEVGFSQAEEVKRILEQNGYENIKS 272 Query: 250 FKDYGGNDRVLL 261 KD +R + Sbjct: 273 RKDLNNIERCIF 284 >gi|52082234|ref|YP_081025.1| YwkE protein [Bacillus licheniformis ATCC 14580] gi|52787626|ref|YP_093455.1| YwkE [Bacillus licheniformis ATCC 14580] gi|52005445|gb|AAU25387.1| YwkE [Bacillus licheniformis ATCC 14580] gi|52350128|gb|AAU42762.1| YwkE [Bacillus licheniformis ATCC 14580] Length = 288 Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 71/223 (31%), Positives = 106/223 (47%), Gaps = 12/223 (5%) Query: 46 LKHESI--HRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103 L H+ + I G FY +++ PRPETE +V++ L+ + D ++ +D Sbjct: 62 LHHQGVPVQYITGKESFYGREFSVNEHVLIPRPETEEVVEAVLSEAERVFHGTDRLKAVD 121 Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-- 161 +GTG+GA+ + L ESP F DIS +AL A+ NA + + + D L D + Sbjct: 122 VGTGSGAIAVTLALESPRFSVTATDISEQALSTARHNA--DRLGAKVDFLCGDLLEPLIA 179 Query: 162 -EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220 + DVIVSNPPYI + L VR +P +L G DGL Y+ + + Sbjct: 180 RQKKADVIVSNPPYISEEDMRTLSDVVRLHEPAGALTDGADGLQFYKRFMKEIPSVIADQ 239 Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFL---VNAFKDYGGNDRVL 260 L EIG+ Q V +F + F V KD G DR++ Sbjct: 240 ALVVFEIGWTQGNAVKDMF--HRFFPDADVRVKKDLNGKDRIV 280 >gi|220908864|ref|YP_002484175.1| HemK family modification methylase [Cyanothece sp. PCC 7425] gi|219865475|gb|ACL45814.1| modification methylase, HemK family [Cyanothece sp. PCC 7425] Length = 314 Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 68/204 (33%), Positives = 97/204 (47%), Gaps = 25/204 (12%) Query: 57 WRDFYNVRLTLSSDTFEPRPETELLVDSAL-------AFSLPRIEKRDVVRILDLGTGTG 109 WR N++L +S PRPETE L+D A+ S P DLGTG+G Sbjct: 90 WR---NLKLHVSPAVLIPRPETEELIDLAIEAVNYHPELSPPHPSSPHWA---DLGTGSG 143 Query: 110 AVCLALLKESPFFKGVGVDISCKALEIAKSN---------AVTNGVSERFDTLQSDW--- 157 A+ L L P K VD S ALE+A N + +R Q DW Sbjct: 144 AIALGLAYSFPTAKIHAVDRSAAALEMAGRNRDRQDWGKDGGAGTLQDRLHFYQGDWLEP 203 Query: 158 FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217 + ++G IVSNPPYI + ++D L EV + +P ++LDGG DGL+ R I + + +L Sbjct: 204 LAKLKGHLTGIVSNPPYIPTELLDELEREVVEHEPSLALDGGADGLTAIREIIETAADYL 263 Query: 218 NKDGLCSVEIGYNQKVDVVRIFES 241 G+ +E+ Q V ++ E Sbjct: 264 QPGGVLLLEMMSGQDQQVRQLLEQ 287 >gi|317401194|gb|EFV81840.1| protein-(glutamine-N5) methyltransferase [Achromobacter xylosoxidans C54] Length = 275 Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 74/219 (33%), Positives = 114/219 (52%), Gaps = 11/219 (5%) Query: 44 RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103 R L E + +LG R+F ++ D PRP+TE+LV++AL + + +LD Sbjct: 56 RRLAGEPMAYLLGQREFMGHMFRVTPDVLIPRPDTEVLVETALEC----VAGQAAPAVLD 111 Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-- 161 LGTG+GA+ +++ + + D+S AL +A NA S RF ++ W+ +V Sbjct: 112 LGTGSGAIAISIALARRDARVMASDVSAAALAVAAGNAWELTASVRF--VEGSWYDAVPA 169 Query: 162 -EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220 EG FD+IVSNPPY+ S +VR F+PR +L G DGL R I G RHL Sbjct: 170 GEG-FDLIVSNPPYVASDDPHLGQGDVR-FEPRGALTDGADGLEDLRRIVAGAHRHLKAG 227 Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRV 259 G +E G++Q V + + V++ +D G +R+ Sbjct: 228 GALWMEHGWDQAEAVRALLAATGFSDVHSRRDLAGIERI 266 >gi|256963677|ref|ZP_05567848.1| modification methylase HemK [Enterococcus faecalis HIP11704] gi|307271623|ref|ZP_07552894.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis TX0855] gi|256954173|gb|EEU70805.1| modification methylase HemK [Enterococcus faecalis HIP11704] gi|306511501|gb|EFM80500.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis TX0855] gi|315170192|gb|EFU14209.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis TX1342] Length = 277 Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 64/212 (30%), Positives = 105/212 (49%), Gaps = 17/212 (8%) Query: 54 ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113 +LG +FY ++ T PRPETE LV+ L + + ++D+GTGTGA+ + Sbjct: 73 LLGQAEFYGHSFIVNEHTLIPRPETEELVERCL-----KANPDTPLTVVDVGTGTGAIAI 127 Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVS 170 +L P ++ + +D+S KAL +AK NA G F + LQ + D+++S Sbjct: 128 SLKLARPNWRVIAIDLSEKALTVAKQNAQALGAGIEFYHGNGLQPVASEKI----DLLIS 183 Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230 NPPYI + VR ++P+ +L +GL+ Y+ + L DG EIG+ Sbjct: 184 NPPYISEQEWYLMDASVRTYEPKTALFAENNGLALYQQLIHESQTMLKADGKIYFEIGFQ 243 Query: 231 QKVDVVRIFES---RKLFLVNAFKDYGGNDRV 259 Q + ++ + +K + KD GNDR+ Sbjct: 244 QGAALQKLLSAAYPQKTIKIE--KDLSGNDRL 273 >gi|295090781|emb|CBK76888.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Clostridium cf. saccharolyticum K10] Length = 338 Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 73/245 (29%), Positives = 107/245 (43%), Gaps = 40/245 (16%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110 + ILG ++F + ++ PR +TE LV+ L R ILD+ TG+G Sbjct: 92 LQHILGSQEFMGLSFRVNEHVLIPRQDTETLVEEVLRDCPDR-----NADILDMCTGSGC 146 Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAV---------------------------- 142 + L+L + D+S AL +A NA Sbjct: 147 IGLSLAVLGRYRSVTAADVSEDALRVAAGNAKRLFLIQKDVVRAESKNFPGLPLRTELTV 206 Query: 143 ------TNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195 N + +F ++SD FS +DVIVSNPPYI S V+ L EVR+ +PR++ Sbjct: 207 WAGKNRENAETRQFRLVRSDLFSEFAAERYDVIVSNPPYIPSGEVEKLEPEVREHEPRLA 266 Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGG 255 LDG DGL YR +A+ ++L + G EIG Q V + + + KD G Sbjct: 267 LDGSADGLHFYRILAEECRKYLKEGGRVYFEIGCEQASAVTELLAQQGYTKIQVVKDAPG 326 Query: 256 NDRVL 260 DRV+ Sbjct: 327 LDRVV 331 >gi|73748900|ref|YP_308139.1| SAM-dependent methyltransferase HemK family protein [Dehalococcoides sp. CBDB1] gi|73660616|emb|CAI83223.1| SAM-dependent methyltransferase HemK family [Dehalococcoides sp. CBDB1] Length = 277 Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 71/260 (27%), Positives = 117/260 (45%), Gaps = 10/260 (3%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 +A +S L G+S Q+ ++ + L + + L+ E I G ++FY Sbjct: 21 EARLESEILLRHTLGISRVQLHLELERELKPEKETVYFETLQHRLEGEPSAYITGEKEFY 80 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 + PRPETE L++ AL + + I D+GTG+G + + L E Sbjct: 81 GRTFLVDKRVLIPRPETEHLIEKALQIA----RHYECPYIADIGTGSGVIAITLALELKD 136 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181 DIS ALE+A+ NA + +R Q D SS+ + D++ +N PY+ Sbjct: 137 AYVYATDISEDALEVARQNAEEYRLEKRLSFYQGDLLSSLPEMVDILAANLPYVPKAEAG 196 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR-IFE 240 L + +PR++LDGG DGL YR + + L G +EIG +Q + + I + Sbjct: 197 LL-----NGEPRLALDGGKDGLDLYRRLIPILPARLRPGGTALLEIGIHQSELLAKYIKD 251 Query: 241 SRKLFLVNAFKDYGGNDRVL 260 + + DY G R++ Sbjct: 252 TLPQASLEIISDYAGIPRIV 271 >gi|150003436|ref|YP_001298180.1| putative protoporphyrinogen oxidase [Bacteroides vulgatus ATCC 8482] gi|254881265|ref|ZP_05253975.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA] gi|149931860|gb|ABR38558.1| putative protoporphyrinogen oxidase [Bacteroides vulgatus ATCC 8482] gi|254834058|gb|EET14367.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA] Length = 278 Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 82/255 (32%), Positives = 121/255 (47%), Gaps = 12/255 (4%) Query: 10 FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69 L +V G+S ++ D+ +R L + +VR K E I I+G +FY + ++ Sbjct: 28 LLTQVFGMSVVELYAGKDTTFSVNERKQLDDILVRLQKLEPIQYIIGTEEFYGLTFEVNK 87 Query: 70 DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129 PRPET LVD + R K VRILD+GTG+G + ++L K + V D+ Sbjct: 88 HVLIPRPETGELVDWII-----REHKYGRVRILDIGTGSGCIAVSLAKNLEEAEVVSWDV 142 Query: 130 SCKALEIAKSNAVTNGVS---ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLE 186 S KAL++A+ N NGV E+ D L + S FDVIVSNPPYI + Sbjct: 143 SEKALQVAERNCRRNGVRVILEQRDVLLA---SPAGERFDVIVSNPPYITEKERADMSAN 199 Query: 187 VRDFDPRISLDGGIDG-LSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245 V +++P ++L D L YR IA+ L G EI + V + + Sbjct: 200 VLEWEPELALFVPDDSPLLFYRKIAELGRDMLVSGGRLYFEINQEYGRETVDMLAGLEYK 259 Query: 246 LVNAFKDYGGNDRVL 260 + KD NDR++ Sbjct: 260 NIKLRKDLFQNDRMI 274 >gi|229549321|ref|ZP_04438046.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Enterococcus faecalis ATCC 29200] gi|255972030|ref|ZP_05422616.1| modification methylase HemK [Enterococcus faecalis T1] gi|256957797|ref|ZP_05561968.1| modification methylase HemK [Enterococcus faecalis DS5] gi|257079735|ref|ZP_05574096.1| modification methylase HemK [Enterococcus faecalis JH1] gi|294779687|ref|ZP_06745077.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Enterococcus faecalis PC1.1] gi|300861227|ref|ZP_07107314.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Enterococcus faecalis TUSoD Ef11] gi|307270730|ref|ZP_07552021.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis TX4248] gi|312953587|ref|ZP_07772424.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis TX0102] gi|229305558|gb|EEN71554.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Enterococcus faecalis ATCC 29200] gi|255963048|gb|EET95524.1| modification methylase HemK [Enterococcus faecalis T1] gi|256948293|gb|EEU64925.1| modification methylase HemK [Enterococcus faecalis DS5] gi|256987765|gb|EEU75067.1| modification methylase HemK [Enterococcus faecalis JH1] gi|294453241|gb|EFG21653.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Enterococcus faecalis PC1.1] gi|300850266|gb|EFK78016.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Enterococcus faecalis TUSoD Ef11] gi|306513040|gb|EFM81681.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis TX4248] gi|310628425|gb|EFQ11708.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis TX0102] gi|315035853|gb|EFT47785.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis TX0027] gi|315151854|gb|EFT95870.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis TX0031] gi|323481493|gb|ADX80932.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Enterococcus faecalis 62] gi|327535787|gb|AEA94621.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis OG1RF] gi|329578087|gb|EGG59500.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis TX1467] Length = 277 Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 64/212 (30%), Positives = 105/212 (49%), Gaps = 17/212 (8%) Query: 54 ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113 +LG +FY ++ T PRPETE LV+ L + + ++D+GTGTGA+ + Sbjct: 73 LLGQAEFYGHSFIVNEHTLIPRPETEELVERCL-----KANPDTPLTVVDVGTGTGAIAI 127 Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVS 170 +L P ++ + +D+S KAL +AK NA G F + LQ + D+++S Sbjct: 128 SLKLARPNWRVIAIDLSEKALTVAKQNAQALGAGIEFYHGNGLQPVASEKI----DLLIS 183 Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230 NPPYI + VR ++P+ +L +GL+ Y+ + L DG EIG+ Sbjct: 184 NPPYISEQEWYLMDASVRTYEPKTALFAENNGLALYQQLIHESQTMLKADGKIYFEIGFQ 243 Query: 231 QKVDVVRIFES---RKLFLVNAFKDYGGNDRV 259 Q + ++ + +K + KD GNDR+ Sbjct: 244 QGAALQKLLSAAYPQKTIKIE--KDLSGNDRL 273 >gi|320167100|gb|EFW43999.1| Hemk1 protein [Capsaspora owczarzaki ATCC 30864] Length = 459 Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 66/187 (35%), Positives = 94/187 (50%), Gaps = 29/187 (15%) Query: 46 LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA---LAFSLPRIEKRDVVR-- 100 L+ + I ILG DF L + F PRPETE LVD L +LP + + Sbjct: 207 LEGKPIQHILGEWDFGLHTLHMHPRVFIPRPETEKLVDMVVKDLKSTLPSSAENNTSSWI 266 Query: 101 ----------------------ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAK 138 IL++G GTGA+ L++L E P + +D++ A E+ + Sbjct: 267 NTTPSSTPSALQISLLVNRPPCILEVGPGTGAIGLSILAELPGLHYLALDVNPFACELTR 326 Query: 139 SNAVTNGVSER--FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL 196 NA G+ R + + F+ +EG FD IVSNPPYI S + L +EVR FDP ++L Sbjct: 327 VNAQRLGLESRTAVHHVAFEQFTLLEGQFDAIVSNPPYIPSREISELDIEVRGFDPHVAL 386 Query: 197 DGGIDGL 203 DGG++GL Sbjct: 387 DGGVEGL 393 >gi|257084461|ref|ZP_05578822.1| modification methylase HemK [Enterococcus faecalis Fly1] gi|256992491|gb|EEU79793.1| modification methylase HemK [Enterococcus faecalis Fly1] Length = 277 Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 63/210 (30%), Positives = 103/210 (49%), Gaps = 13/210 (6%) Query: 54 ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113 +LG +FY ++ T PRPETE LV+ L + + ++D+GTGTGA+ + Sbjct: 73 LLGQAEFYGHSFIVNEHTLIPRPETEELVERCL-----KANPDTPLTVVDVGTGTGAIAI 127 Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNP 172 +L P ++ + +D+S +AL +AK NA G F Q + V D+++SNP Sbjct: 128 SLKLARPNWRVIAIDLSEEALTVAKQNAQALGAGIEF--YQGNGLQPVASEKIDLLISNP 185 Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232 PYI + VR ++P+ +L +GL+ Y+ + L DG EIG+ Q Sbjct: 186 PYISEQEWHLMDASVRTYEPKTALFAENNGLALYQQLIHESQTMLKADGKIYFEIGFQQG 245 Query: 233 VDVVRIFES---RKLFLVNAFKDYGGNDRV 259 + + + +K + KD GNDR+ Sbjct: 246 AALQELLSAAYPQKTIKIE--KDLSGNDRL 273 >gi|256372570|ref|YP_003110394.1| modification methylase, HemK family [Acidimicrobium ferrooxidans DSM 10331] gi|256009154|gb|ACU54721.1| modification methylase, HemK family [Acidimicrobium ferrooxidans DSM 10331] Length = 255 Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 67/214 (31%), Positives = 100/214 (46%), Gaps = 9/214 (4%) Query: 49 ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108 E + +LG F L + PR ETE LV+ LA R +R+LD+GTG+ Sbjct: 39 EPLQYVLGTWSFRGHELRVDHRALIPRYETEQLVEHVLAAV------RTGMRVLDVGTGS 92 Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDV 167 GA+ ++L E P + G D+ +AL +A+ N G ++ WF E DV Sbjct: 93 GAIAISLALEGPRLEVTGSDVDPRALALARENVRATGAL--VTLVRRSWFEGAEPESLDV 150 Query: 168 IVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227 +V+NPPY+ + + L VR F+PR++L G GL + G L G +EI Sbjct: 151 VVANPPYVAASEWERLDPAVRVFEPRVALVPGPSGLEGPMAVIGGARVALRPGGWLFMEI 210 Query: 228 GYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 G Q +V ++ V +D G RVL+ Sbjct: 211 GETQGERLVAEASAQGYGDVTVERDLAGRPRVLV 244 >gi|157737442|ref|YP_001490125.1| modification methylase [Arcobacter butzleri RM4018] gi|157699296|gb|ABV67456.1| modification methylase [Arcobacter butzleri RM4018] Length = 277 Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 71/211 (33%), Positives = 116/211 (54%), Gaps = 13/211 (6%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG- 109 + I+G FY + + PRPETE+LV++A+ +K++ +++L++GTG+G Sbjct: 67 LEYIIGKASFYGEQFLVKEGVLIPRPETEILVENAVEILK---DKKEPIKVLEIGTGSGI 123 Query: 110 -AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDV 167 +V LA+L E+ K + VDI+ KA+E+AK NA+ + V E+ D S+ + +V E ++ Sbjct: 124 ISVMLAMLIEN--IKIIAVDINPKAIELAKENAIKHNVLEKIDFRLSNLYENVNEDDINL 181 Query: 168 IVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227 +SNPPYI + L L V+ F+P +L GG G + I + LC E+ Sbjct: 182 TISNPPYIANDY--KLPLNVK-FEPSNALFGGNLGDELLKDIIKQTNDKKIPYLLC--EM 236 Query: 228 GYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258 GY+QK + F+ + N +KDY DR Sbjct: 237 GYDQKKSLEEYFKQFNVESYNFYKDYENFDR 267 >gi|157105369|ref|XP_001648837.1| protein-(glutamine-N5) methyl transferase, putative [Aedes aegypti] gi|108880106|gb|EAT44331.1| protein-(glutamine-N5) methyl transferase, putative [Aedes aegypti] Length = 328 Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 65/220 (29%), Positives = 112/220 (50%), Gaps = 19/220 (8%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110 I I+ +F ++ L + F PRPETE L++ L +I+ + ++ L++G GTGA Sbjct: 109 IQYIIHEWEFRDLTLKMVPPVFIPRPETEELIE----LILQQIDAQKEMKFLEIGCGTGA 164 Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF--------DTLQSDWFSSVE 162 + L++LK +P V +D S A E+ NA +G+ + D L ++ S Sbjct: 165 ISLSILKHAPQASAVALDQSTLACELTMENAKNHGLVDNLRIFRHKLVDKLPTELESHK- 223 Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL 222 FD+IVSNPPY+ S + L E++ ++ +LDGG DGL+ + I D +HL G+ Sbjct: 224 --FDMIVSNPPYVPSRQLLALEPEIKVYEDLRALDGGPDGLTVVKAILDIAGKHLEPSGV 281 Query: 223 CSVEIGYNQKVDVVRIFESR----KLFLVNAFKDYGGNDR 258 +E+ + + + E L ++++KD +R Sbjct: 282 LWLEVDSSHPPLIEKYLEEAVPELGLKFMSSYKDMFRKER 321 >gi|325474791|gb|EGC77977.1| HemK family Modification methylase [Treponema denticola F0402] Length = 329 Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 73/244 (29%), Positives = 120/244 (49%), Gaps = 35/244 (14%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110 I + G +DF+ ++ + P+P+TE LV+ AL F+ +++K + + +LD+ TG+G Sbjct: 80 IAYLTGTKDFFGRTFYVNENVLIPKPDTETLVEHALNFAKEKLKKNESLFVLDICTGSGC 139 Query: 111 VCLALLKE----------------------SPF---FKGVGVDISCKALEIAKSNA---V 142 + L+L E S F F + DIS +AL++ K N + Sbjct: 140 IGLSLAAELYENLSQTSDAFDKPQRAQRTQSYFDRSFFLILADISEEALKVCKKNMDYLL 199 Query: 143 TNGVSERFDTLQSDW---FSSV---EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL 196 + + +R +++D F V + +D+I +NPPY+ S +++ L LE +PR++L Sbjct: 200 PSALYKRVLAVKADLHLPFPCVPESKRSYDLITANPPYVPSKLMESL-LEDGRSEPRLAL 258 Query: 197 DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGN 256 DGGI+GL +A+ LN G VE+G IF S V KD GN Sbjct: 259 DGGIEGLDLIPPLAENSYLSLNLGGKLFVEVGEYHAAQAAEIFRSAGFSQVQIHKDLAGN 318 Query: 257 DRVL 260 DRV+ Sbjct: 319 DRVI 322 >gi|313678883|ref|YP_004056623.1| methyltransferase, HemK family [Mycoplasma bovis PG45] gi|312950570|gb|ADR25165.1| methyltransferase, HemK family [Mycoplasma bovis PG45] Length = 240 Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 74/209 (35%), Positives = 106/209 (50%), Gaps = 13/209 (6%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110 I I+G+ ++ NVR+ L+ + PR ETE LV F L + + +++LDL TG+G Sbjct: 34 IQYIMGYVEYANVRINLNHNVLIPRYETEELV-----FILLKEYLKPGMKVLDLCTGSGF 88 Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTN-GVSERFDTLQSDWFSSVEGLFDVIV 169 + LAL K + DI +A+ K NA+ N G E + +QSD F + G FDVIV Sbjct: 89 IGLALKKNLNSIRLTLSDIDSEAILQTKENAILNFGNDENIEIVQSDCFKDITGKFDVIV 148 Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY 229 SNPPY+ D + V F+P I+L G Y I + +LN+ G+ + EI Sbjct: 149 SNPPYLTYDDKD-VDESVSKFEPAIALFSPDSGWYFYEKILNEAKTYLNEGGILAFEI-- 205 Query: 230 NQKVDVVRIFESRKLFLVNAFKDYGGNDR 258 N K IF+ K+ V KD DR Sbjct: 206 NPK----HIFKWEKIPGVRILKDMSKKDR 230 >gi|257421857|ref|ZP_05598847.1| protoporphyrinogen oxidase hemK [Enterococcus faecalis X98] gi|257163681|gb|EEU93641.1| protoporphyrinogen oxidase hemK [Enterococcus faecalis X98] gi|315155438|gb|EFT99454.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis TX0043] Length = 277 Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 64/212 (30%), Positives = 105/212 (49%), Gaps = 17/212 (8%) Query: 54 ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113 +LG +FY ++ T PRPETE LV+ L + + ++D+GTGTGA+ + Sbjct: 73 LLGQAEFYGHSFIVNEHTLIPRPETEELVERCL-----KANPDTPLTVVDVGTGTGAIAI 127 Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVS 170 +L P ++ + +D+S +AL +AK NA G F + LQ + D+++S Sbjct: 128 SLKLARPNWRVIAIDLSEEALTVAKQNAQALGAGIEFYHGNGLQPVTSEKI----DLLIS 183 Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230 NPPYI + VR ++P+ +L +GL+ Y+ + L DG EIG+ Sbjct: 184 NPPYISEQEWHLMDASVRTYEPKTALFAENNGLALYQQLIHESQTMLKADGKIYFEIGFQ 243 Query: 231 QKVDVVRIFES---RKLFLVNAFKDYGGNDRV 259 Q V + + + +K + KD GNDR+ Sbjct: 244 QGVALQELLSAAYPQKTIKIE--KDLSGNDRL 273 >gi|259046348|ref|ZP_05736749.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Granulicatella adiacens ATCC 49175] gi|259036985|gb|EEW38240.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Granulicatella adiacens ATCC 49175] Length = 290 Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 75/229 (32%), Positives = 116/229 (50%), Gaps = 14/229 (6%) Query: 38 LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97 L ++R K E + +I G +F ++ DT PRPETE LV +F +E+ Sbjct: 65 LEPELLRLSKFEPLQQITGVAEFLGEEFIVTKDTLIPRPETEELVLKVQSF----LEQCP 120 Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 V +L++G GTG + L+L + G DIS +AL +A+ N + + + + SD Sbjct: 121 VGNVLEIGVGTGCIILSLERLVGRHHYKGCDISEEALIVAQKN--RDKFNLQTELFYSDV 178 Query: 158 FSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216 +S+V F+ I+SNPPYI + VR ++P +L +GL+ Y IA+ + Sbjct: 179 YSNVPREQFECIISNPPYIAFSEEALMDESVRLYEPIQALFAENEGLAIYEKIANRLEEF 238 Query: 217 LNKDGLCSVEIGYNQKVDVVRIFE----SRKLFLVNAFKDYGGNDRVLL 261 L G EIG+NQ V RIF +RK V+ KD G DR+++ Sbjct: 239 LTDSGHAFFEIGFNQGASVQRIFSEACPNRK---VSIQKDIAGLDRMII 284 >gi|315172489|gb|EFU16506.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis TX1346] Length = 277 Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 64/212 (30%), Positives = 105/212 (49%), Gaps = 17/212 (8%) Query: 54 ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113 +LG +FY ++ T PRPETE LV+ L + + ++D+GTGTGA+ + Sbjct: 73 LLGQAEFYGHSFIVNEHTLIPRPETEELVERCL-----KANPDTPLTVVDVGTGTGAIAI 127 Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVS 170 +L P ++ + +D+S +AL +AK NA G F + LQ + D+++S Sbjct: 128 SLKLARPNWRVIAIDLSEEALTVAKQNAQALGAGIEFYHGNGLQPVASEKI----DLLIS 183 Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230 NPPYI + VR ++P+ +L +GL+ Y+ + L DG EIG+ Sbjct: 184 NPPYISEQEWHLMDASVRTYEPKTALFAENNGLALYQQLIHESQTMLKADGKIYFEIGFQ 243 Query: 231 QKV---DVVRIFESRKLFLVNAFKDYGGNDRV 259 Q +++R +K + KD GNDR+ Sbjct: 244 QGAALQELLRAAYPQKTIKIE--KDLSGNDRL 273 >gi|320120317|gb|ADW16126.1| hypothetical protein HMPREF0389_01680 [Filifactor alocis ATCC 35896] Length = 279 Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 63/216 (29%), Positives = 104/216 (48%), Gaps = 5/216 (2%) Query: 50 SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109 I ++ + FY +S PRP+TE+L++ L I V +++G G+G Sbjct: 68 PIAYLIHKKPFYGRDFFVSPGVLIPRPDTEILIEKTLDV----IPDNKQVSGIEIGCGSG 123 Query: 110 AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVI 168 A+ + LL E+ V DI +EI NA N V R +++D F+ + FD I Sbjct: 124 AISITLLLENRLLNMVATDIEAIPIEITSKNANLNNVQNRLRLIKTDLFNGIPSKQFDFI 183 Query: 169 VSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228 +SNPPYI L +V D++P+++L +G+ +R I + + L +DG + EIG Sbjct: 184 ISNPPYIPYDDSTKLMKDVIDYEPKVALFAEENGIFFFRKILEDGKKFLKEDGFVAFEIG 243 Query: 229 YNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 +Q + + V +D G DRV++ R Sbjct: 244 CSQAKQIRELCLKEGFHKVLIHRDLHGLDRVVIAFR 279 >gi|284051235|ref|ZP_06381445.1| modification methylase, HemK family protein [Arthrospira platensis str. Paraca] Length = 310 Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 69/215 (32%), Positives = 99/215 (46%), Gaps = 13/215 (6%) Query: 54 ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV------RILDLGTG 107 ++ WR+F L +S PRPETEL++D A ++ E + + +DLGTG Sbjct: 91 VVHWRNF---ALKVSPAVLIPRPETELIIDIAASYHATSSEAINSICQPGSGNWVDLGTG 147 Query: 108 TGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS---SVEGL 164 +GA+ L L P VD S AL IA NA + G R Q W++ S++G Sbjct: 148 SGAIALGLASVFPQAMIHAVDCSWSALAIALENAQSLGYQNRVKFYQGSWWAPLHSLKGK 207 Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224 +V+NPPYI S + L EV +P +LDGG GL + + L G+ Sbjct: 208 VSGMVANPPYIPSQELPNLQPEVVYHEPHQALDGGESGLDCIHHLVQTAPQFLQPGGIWI 267 Query: 225 VEIGYNQKVDVVRIFESRKLFL-VNAFKDYGGNDR 258 VE+ Q V + ES + + D G DR Sbjct: 268 VEMMAGQGQAVTSMLESAGCYRDIKILPDLAGIDR 302 >gi|169832289|ref|YP_001718271.1| HemK family modification methylase [Candidatus Desulforudis audaxviator MP104C] gi|169639133|gb|ACA60639.1| modification methylase, HemK family [Candidatus Desulforudis audaxviator MP104C] Length = 287 Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 73/247 (29%), Positives = 118/247 (47%), Gaps = 17/247 (6%) Query: 25 DPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDS 84 +P+ L + +R + L + + G R+F + ++ + PRPETEL+V+ Sbjct: 49 EPERALTETERGRFEQMVRDRLAGRPVAYLTGHREFMGLDFVVTPEVLVPRPETELIVEE 108 Query: 85 ALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN 144 AL E VV D+GTG+GA+ ++L + + + D+S AL +A+ N + Sbjct: 109 ALRLMSGGPEGSLVV---DVGTGSGAIAVSLARYVRGARVLATDLSEAALTVARLNVGRH 165 Query: 145 GVSERF--DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202 V+ F L +++ G D+I++N PYI + +D L VR +PR++LDGG DG Sbjct: 166 RVAVEFLLGDLMEPIPAALAGQIDLIIANLPYIPTAQMDTLPRAVR-AEPRLALDGGPDG 224 Query: 203 LSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI-----FESRKLFLVNAFKDYGGND 257 L YR + R L G EI Q + I +ESR L D + Sbjct: 225 LDLYRRLVPQAHRFLRPGGSLLFEIAPGQGRAALTIVPSPDWESRIL------TDLAERE 278 Query: 258 RVLLFCR 264 RV++ C+ Sbjct: 279 RVVIACK 285 >gi|325928211|ref|ZP_08189419.1| (protein release factor)-glutamine N5-methyltransferase [Xanthomonas perforans 91-118] gi|325929424|ref|ZP_08190552.1| (protein release factor)-glutamine N5-methyltransferase [Xanthomonas perforans 91-118] gi|325540199|gb|EGD11813.1| (protein release factor)-glutamine N5-methyltransferase [Xanthomonas perforans 91-118] gi|325541427|gb|EGD12961.1| (protein release factor)-glutamine N5-methyltransferase [Xanthomonas perforans 91-118] Length = 286 Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 76/224 (33%), Positives = 114/224 (50%), Gaps = 8/224 (3%) Query: 40 NAIV-RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV 98 NA+V R E + + G R F+ + L +S T PR +TE+LV+ +L R++ Sbjct: 58 NALVQRREAGEPVAYLTGSRGFWTLDLAVSPATLIPRADTEVLVE----LALERLDTVPG 113 Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 R+ DLGTG+GA+ LA+ E P + + D S AL +A+ NA ++G+ D Q WF Sbjct: 114 RRVADLGTGSGAIALAIASERPQAQVIATDASAAALAMARRNADSHGL-RNVDCRQGSWF 172 Query: 159 SSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217 + + G FD+I SNPPYI + ++R ++P +L G DGL R I HL Sbjct: 173 APLAGEAFDLIASNPPYIAAHDPHLKQGDLR-YEPASALASGSDGLDDIRLIVADAPAHL 231 Query: 218 NKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 G +E G++Q V + +R V +D DRV L Sbjct: 232 VPGGWLLLEHGWDQGAAVAELLAARGFAAVATHQDLERRDRVTL 275 >gi|110636627|ref|YP_676834.1| protoporphyrinogen oxidase [Cytophaga hutchinsonii ATCC 33406] gi|110279308|gb|ABG57494.1| possible protoporphyrinogen oxidase [Cytophaga hutchinsonii ATCC 33406] Length = 287 Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 69/219 (31%), Positives = 111/219 (50%), Gaps = 17/219 (7%) Query: 49 ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV-RILDLGTG 107 E + I+G FY+ ++ T PRPETE LV +L E +I+D+GTG Sbjct: 74 EPVQYIIGKTFFYDSYFNVTPATLIPRPETEELV------ALIITENNSAAPQIIDIGTG 127 Query: 108 TGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF---SSVEGL 164 TG + ++L K+ + VDIS +AL +A+ NA+ N VS F L+ ++ SS++ Sbjct: 128 TGCIAISLAKKIKGARVTAVDISTEALAVAEENALKNEVSVSF--LEMNFLTQHSSIQSS 185 Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRISL---DGGIDGLSHYRTIADGVSRHLNKDG 221 FD+IVSNPPY+ + V +P ++L DG + L +Y + S HL+KDG Sbjct: 186 FDIIVSNPPYVLQSEKKEMRENVLAHEPHLALFVEDG--NALIYYDALLKFASSHLHKDG 243 Query: 222 LCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 EI + +++++ + KD DR++ Sbjct: 244 TFYAEINEQKGNELIKLAHTYGFADSTIIKDLYQKDRII 282 >gi|312795902|ref|YP_004028824.1| peptide release factor-glutamine N5-methyltransferase [Burkholderia rhizoxinica HKI 454] gi|312167677|emb|CBW74680.1| Peptide release factor-glutamine N5-methyltransferase (EC 2.1.1.-) [Burkholderia rhizoxinica HKI 454] Length = 321 Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 77/256 (30%), Positives = 114/256 (44%), Gaps = 38/256 (14%) Query: 35 RFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIE 94 RF A R ++ E I +++G R+F+ + ++ PRPETELLV+ AL ++ Sbjct: 68 RFLALQA--RRVEGEPIAQLVGSREFFGLDFDVTPHVLIPRPETELLVECALNA----VQ 121 Query: 95 KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA------------- 141 RILDLGTG+GA+ +A+ P + V D AL++A+ NA Sbjct: 122 TIPSPRILDLGTGSGAIAIAIAHTRPDARIVATDRCAGALDVARRNARRLLGDAALAPAL 181 Query: 142 ---------VTNG--VSERFDTLQSDWFSSV-------EGLFDVIVSNPPYIESVIVDCL 183 VT+G R WF ++ FD IVSNPPYI + Sbjct: 182 PVSAARHDFVTSGTPTQPRLALRHGTWFDALSEPHRLAPARFDAIVSNPPYIAASDPHLR 241 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 ++R F+P +L DGLS R I G L +E GY+Q V + ++ Sbjct: 242 EGDLR-FEPLDALTDHADGLSAIRAIVTGSVAWLAPGATLWLEHGYDQAEAVRALLDAHG 300 Query: 244 LFLVNAFKDYGGNDRV 259 V + +D G +RV Sbjct: 301 FDSVRSVRDLAGIERV 316 >gi|296273266|ref|YP_003655897.1| HemK family modification methylase [Arcobacter nitrofigilis DSM 7299] gi|296097440|gb|ADG93390.1| modification methylase, HemK family [Arcobacter nitrofigilis DSM 7299] Length = 274 Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 70/202 (34%), Positives = 101/202 (50%), Gaps = 9/202 (4%) Query: 60 FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119 FY + + PRPETE+LV+ A L +IE VV I GTG+G + + L K Sbjct: 76 FYGETFIIKQNVLIPRPETEILVEKAFE-KLKQIENPKVVEI---GTGSGIISVMLSKLL 131 Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179 P K VDI+ ALE+AK NA + V + ++SD V G FD+ +SNPPYI + Sbjct: 132 PQLKVTAVDINDDALELAKENAKKHSVENQISFIKSDLLKEVSGDFDMCISNPPYISNNY 191 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 V L V+ ++P+ +L GG G + + V+ K C E GY+QK + Sbjct: 192 V--LPHNVK-YEPKNALFGGEIGDELLKDLIKEVTEKNIKYLYC--EYGYDQKESIKNYM 246 Query: 240 ESRKLFLVNAFKDYGGNDRVLL 261 + + + +KDY DR L Sbjct: 247 KKFNVKSLEFYKDYSDFDRGFL 268 >gi|298372803|ref|ZP_06982793.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacteroidetes oral taxon 274 str. F0058] gi|298275707|gb|EFI17258.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacteroidetes oral taxon 274 str. F0058] Length = 283 Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 84/260 (32%), Positives = 132/260 (50%), Gaps = 23/260 (8%) Query: 10 FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69 L ++ GL++ + ++ L D Q + +A+ R ++E I I+G+ DFY + L Sbjct: 30 LLDKICGLNTTKRLISDKIYLSDEQNGRIDDALERLKRYEPIQYIIGYTDFYGLTLRTDR 89 Query: 70 DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG--AVCLA-LLKESPFFKGVG 126 PRPETE LVD L E ++D+ TG+G AVCLA LKE+ K Sbjct: 90 RALIPRPETEELVDWILQ------ECSTAKNVIDICTGSGCIAVCLAKYLKEA---KVSA 140 Query: 127 VDISCKALEIAKSNAVTNGVSERFDTL--QSDWFS--SVEGLFDVIVSNPPYIE-SVIVD 181 +DIS +A+ +A+ NA +++R D + Q D + S+ FD+IV+NPPY+ + +D Sbjct: 141 LDISSEAIGLARENA----LNQRLDIVFYQKDIMATDSLWQKFDLIVANPPYVTLNEKID 196 Query: 182 CLGLEVRDFDPRISL-DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 + V D++P ++L D L YRTIA ++L G+ EI + V + Sbjct: 197 MMP-NVLDYEPSLALFVDDEDPLIFYRTIARFARKNLVDGGMLFFEINRKFGKETVDLLA 255 Query: 241 SRKLFLVNAFKDYGGNDRVL 260 S + KD GNDR + Sbjct: 256 SMGFVDIVPKKDISGNDRFI 275 >gi|218459800|ref|ZP_03499891.1| protoporphyrinogen oxidase (methyltransferase) protein [Rhizobium etli Kim 5] Length = 141 Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 48/103 (46%), Positives = 67/103 (65%) Query: 18 SSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPE 77 SS +++ L Q ++ A+ R L HE +HRILG R+FY + L LS++T EPRP+ Sbjct: 39 SSTELLTRSAEKLSPDQLVMISKAMERRLDHEPVHRILGEREFYGLPLQLSAETLEPRPD 98 Query: 78 TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120 TE+LVD+ LA+ + + ILD+GTGTGA+CLALL E P Sbjct: 99 TEILVDTVLAYLKDLAKVHGHLHILDIGTGTGAICLALLSECP 141 >gi|330996374|ref|ZP_08320257.1| protein-(glutamine-N5) methyltransferase [Paraprevotella xylaniphila YIT 11841] gi|329573232|gb|EGG54846.1| protein-(glutamine-N5) methyltransferase [Paraprevotella xylaniphila YIT 11841] Length = 284 Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 79/259 (30%), Positives = 120/259 (46%), Gaps = 19/259 (7%) Query: 16 GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75 GL+ + + + +R L N + R + E + +LG DF +++ PR Sbjct: 34 GLTQVDICMGRERTFSLEERRDLENIVKRLSQKEPVQYVLGQADFCGRTFSVAPGVLVPR 93 Query: 76 PETELLVD------SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129 PETE L + A FS P I LD+GTG+G + + L +E P + +DI Sbjct: 94 PETEELAEWIIRDEKASEFSSPHI--------LDIGTGSGCIAITLSQELPQAQVSAIDI 145 Query: 130 SCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLE 186 S +AL IA+ NA GV+ F D L S L+D+IVSNPPYI + + Sbjct: 146 SPQALAIARENAECLGVAVNFRCQDILDSPSKEQDSPLWDIIVSNPPYICEHEREDMEEN 205 Query: 187 VRDFDPRISL-DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245 V ++P +L D L YR I + + L + G +EI + R+F+ L Sbjct: 206 VLRYEPSQALFVPDHDPLLFYRAIGEYAVKMLKEGGRLYMEINRAYGRETARLFQHLGLR 265 Query: 246 LVNAFKDYGGNDRVLLFCR 264 + KD GN+R ++ CR Sbjct: 266 DIIVRKDLYGNER-MVRCR 283 >gi|300769799|ref|ZP_07079679.1| protein-(glutamine-N5) methyltransferase [Sphingobacterium spiritivorum ATCC 33861] gi|300763250|gb|EFK60066.1| protein-(glutamine-N5) methyltransferase [Sphingobacterium spiritivorum ATCC 33861] Length = 285 Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 76/258 (29%), Positives = 117/258 (45%), Gaps = 16/258 (6%) Query: 11 LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70 L VTG++ Q V + + Q+ L + L+ + I IL DFY ++ Sbjct: 32 LEEVTGINRMQYAVRNTEAVTEEQKIQLDRILQELLRRKPIQHILKKADFYGEIFEVNEF 91 Query: 71 TFEPRPETELLVDSALAF----SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126 PRPETE LV + ++P ++I+D+GTG+G + + L K P Sbjct: 92 VLIPRPETEELVHLIIGHHRSSAVP-------LKIIDIGTGSGCIPVILKKHMPSAHVSA 144 Query: 127 VDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183 +DIS +A+ +AK NA G F D L+ ++ + E L+D+IVSNPPYI + + Sbjct: 145 LDISKEAIAVAKRNAKKLGTDIHFVNADILEWEYLFT-EQLYDIIVSNPPYITPKEKEDM 203 Query: 184 GLEVRDFDPRISL-DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 V +F+P ++L L Y TIA HL G EI + + + Sbjct: 204 HSNVLEFEPHLALFVEESTPLLFYETIASFALVHLKPSGDLYFEINQYYGPETANMLRKK 263 Query: 243 KLFLVNAFKDYGGNDRVL 260 V KD G DR++ Sbjct: 264 GFSTVELIKDMHGADRMI 281 >gi|255020173|ref|ZP_05292242.1| Hypothetical adenine-specific methylase yfcB [Acidithiobacillus caldus ATCC 51756] gi|254970315|gb|EET27808.1| Hypothetical adenine-specific methylase yfcB [Acidithiobacillus caldus ATCC 51756] Length = 304 Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 72/233 (30%), Positives = 112/233 (48%), Gaps = 13/233 (5%) Query: 14 VTGLSSHQVIVDPDSVLDDRQRFFLT---NAIVRSLKHESIHR-----ILGWRDFYNVRL 65 + L + ++ ++P+ + + RQ AI+ + I R ILG F +R Sbjct: 45 ASALVARRLGLEPEDLPEVRQCLLTRAEREAILDAFYQREILRRPTAYILGEAWFAGLRF 104 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 + PR E ++ A P ++ V RIL++GTG+G + +AL ++ P Sbjct: 105 AVDERVLIPRSLLEPFIEEGFA---PWVQAERVRRILEIGTGSGCMAVALARQFPQASVD 161 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLG 184 VDIS + LE+A N +G+ ER SD FS+V FD+IVSNPPY+++ + L Sbjct: 162 AVDISPQVLELAAQNVRRHGLEERIRLYTSDIFSAVGPARFDLIVSNPPYVDAAAMADLP 221 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237 E R +PR++L G DGL + D HL G VE G + + R Sbjct: 222 PEYR-HEPRLALAAGEDGLDCILPLLDQAPDHLLPGGALVVETGDAEHALLAR 273 >gi|46446287|ref|YP_007652.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Candidatus Protochlamydia amoebophila UWE25] gi|46399928|emb|CAF23377.1| putative HemK protein [Candidatus Protochlamydia amoebophila UWE25] Length = 279 Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 77/227 (33%), Positives = 115/227 (50%), Gaps = 10/227 (4%) Query: 40 NAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV 99 N + R +K E + I G DFY + ++ PR ETE+LVD + L +K Sbjct: 56 NYLKRRMKGEPLAYIQGSIDFYGCSIQVNPFVLIPRQETEILVDKISTY-LSHQKKLSGK 114 Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 + DL +G+G + +AL K+ P + D+S AL +A+SNA N V F LQ D Sbjct: 115 ILWDLCSGSGCIGIALKKKFPQLHVISSDLSSAALSLARSNAQDNQVEVEF--LQGDLLE 172 Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 EG I+ NPPYI L LEV++F+P+++L GG GL Y+ +A+ + +L Sbjct: 173 PFEGRRAHFIICNPPYISEAEFKDLDLEVKEFEPKMALVGGETGLEIYQRLAEILPNYLY 232 Query: 219 KDGLCSVEIGYNQKVDVVRIFES---RKLFLVNAFKDYGGNDRVLLF 262 EIGY Q + +IF+S ++ FL N D+ G+ R Sbjct: 233 PHAKIWFEIGYKQGDSLKKIFKSSYWKRAFLEN---DWAGHHRFFFL 276 >gi|294631401|ref|ZP_06709961.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptomyces sp. e14] gi|292834734|gb|EFF93083.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptomyces sp. e14] Length = 279 Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 75/243 (30%), Positives = 110/243 (45%), Gaps = 17/243 (6%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ V G+ Q+ D+ D R I R + E + I G F + L Sbjct: 24 DAEELAAFVHGVKRGQLHTVKDADFDAR----YWEVIARREQREPLQHITGRAYFRYLEL 79 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR--ILDLGTGTGAVCLALLKESPFFK 123 + F PRPETE S + +++ + DVV I+DL TG+GA+ LAL +E P + Sbjct: 80 QVGPGVFVPRPETE----SVVGWAIDAVRAMDVVEPCIVDLCTGSGAIALALAQEVPRSR 135 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW---FSSVEGLFDVIVSNPPYIESVIV 180 V++S AL + N + R D Q D F ++G D+++SNPPYI Sbjct: 136 VHAVELSEDALRWTRKNVEGS----RVDLRQGDALTAFPDLDGQVDLVISNPPYIPLTEW 191 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 + + E RD+DP ++L G DGL R I R L G+ +E Q V IF Sbjct: 192 EYVAPEARDYDPELALFSGEDGLDLIRGIERTAHRLLRPGGVVVIEHADTQGGQVPWIFT 251 Query: 241 SRK 243 + Sbjct: 252 EER 254 >gi|311033343|ref|ZP_07711433.1| HemK family modification methylase [Bacillus sp. m3-13] Length = 260 Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 71/228 (31%), Positives = 108/228 (47%), Gaps = 25/228 (10%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR-----------DVV 99 + ++G +FY +S + PRPETE LV L R++K + + Sbjct: 37 VQYLMGKEEFYGRSFFVSEEVLIPRPETEELVVGVL----DRVKKHFGDDTVSDAAGEKL 92 Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW-- 157 ++D+GTG+GA+ + L E+ DI+ ++LE+A NA G F LQ D Sbjct: 93 SVVDVGTGSGAIAITLALENSSLNVHATDIAGESLEVAMDNAEALGAEVAF--LQGDLLL 150 Query: 158 -FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216 F + DV+VSNPPYI + L V+DF+P +L GG+ GL Y D + + Sbjct: 151 PFIEQDIKVDVVVSNPPYIPQKEYEGLSTVVKDFEPYRALVGGVSGLEFYERFMDELPKV 210 Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRKLF---LVNAFKDYGGNDRVLL 261 L + + + E+G Q DV + E K F V D G DR++ Sbjct: 211 LKERAIVAFEVGMGQGEDVKALLE--KTFPQSKVEVVLDINGKDRMVF 256 >gi|312622682|ref|YP_004024295.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Caldicellulosiruptor kronotskyensis 2002] gi|312203149|gb|ADQ46476.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Caldicellulosiruptor kronotskyensis 2002] Length = 288 Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 74/262 (28%), Positives = 124/262 (47%), Gaps = 24/262 (9%) Query: 10 FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69 L ++ + +VI++ ++ + + NAI + L+ + F + L + Sbjct: 37 MLSQILNMEKTEVILNKGLPVEQDKYEKIVNAISKYLQDYPLQYCTNKAFFMGLELYVDE 96 Query: 70 DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF--KGVGV 127 + PR +TE+LV+ A+ + R + LD+GTG+G + +AL K F K V Sbjct: 97 NVLIPRFDTEVLVEVAIEI----FKGRKNLYFLDIGTGSGCIAVALCK---FLDCKVFAV 149 Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCLGL 185 DIS +ALE+A+ NA NGV R ++S+ F + FD I+SNPPYI Sbjct: 150 DISERALEVARKNAKLNGVENRISFVRSNLFEDIPKNLRFDAIISNPPYISDE------- 202 Query: 186 EVRDFDPR------ISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 E+ + DPR I+L DGL +R IA+ +L G E+G++Q V I Sbjct: 203 EIFELDPRVLKEPHIALFSKEDGLWFFREIANKAKLYLKDGGYIIFEVGFSQAEKVKEIL 262 Query: 240 ESRKLFLVNAFKDYGGNDRVLL 261 + +++ +D +R + Sbjct: 263 KKNGYKNISSRRDLNNVERCIF 284 >gi|312899932|ref|ZP_07759250.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis TX0470] gi|311292928|gb|EFQ71484.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis TX0470] Length = 277 Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 64/212 (30%), Positives = 104/212 (49%), Gaps = 17/212 (8%) Query: 54 ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113 +LG +FY ++ T PRPETE LV+ L + + ++D+GTGTGA+ + Sbjct: 73 LLGQAEFYGHSFIVNEHTLIPRPETEELVERCL-----KANPDTPLTVVDVGTGTGAIAI 127 Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVS 170 +L P ++ + +D+S KAL +AK NA G F + LQ + D+++S Sbjct: 128 SLKLARPNWRVIAIDLSEKALTVAKQNAQALGAGIEFYHGNGLQPVASEKI----DLLIS 183 Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230 NPPYI + VR ++P+ +L +GL+ Y+ + L DG EIG+ Sbjct: 184 NPPYISEQEWYLMDASVRTYEPKTALFAENNGLALYQQLIHESQTMLKADGKIYFEIGFQ 243 Query: 231 QKVDVVRIFES---RKLFLVNAFKDYGGNDRV 259 Q + + + +K + KD GNDR+ Sbjct: 244 QGAALQELLSAAYPQKTIKIE--KDLSGNDRL 273 >gi|222098800|ref|YP_002532858.1| modification methylase, hemk family [Bacillus cereus Q1] gi|221242859|gb|ACM15569.1| modification methylase, HemK family [Bacillus cereus Q1] Length = 283 Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 77/264 (29%), Positives = 124/264 (46%), Gaps = 25/264 (9%) Query: 11 LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70 LC V + ++++ + Q T I + ++ I ++G FY ++ + Sbjct: 28 LCHVLKTNRTGLLMNMREEITAEQEKSFTEFIHKHVEGIPIQYMIGHEMFYGRSFFVNEE 87 Query: 71 TFEPRPETELLVDSALAFSLPRIEKR---DVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 PRPETE L+ L RI++ + + + D+GTG+GA+ + L E+ V Sbjct: 88 VLIPRPETEELIVGVLE----RIDRHFNDEKLHVADIGTGSGAISITLSLENKNLHVYTV 143 Query: 128 DISCKALEIAKSNAVTNGVSERF--DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185 DI+ +++++AK NA T G F L S ++ + + L DV+VSNPPYI L Sbjct: 144 DIAQESIKVAKENAKTLGAEVTFYHGDLLSPFYETGQKL-DVVVSNPPYIPEEDWRGLSP 202 Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245 V++ +P+ +L GG DGL YR + + L K + + EIG Q DV K Sbjct: 203 VVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEIGVGQGEDV-------KGL 255 Query: 246 LVNAFK--------DYGGNDRVLL 261 L AF D G DR++ Sbjct: 256 LQQAFPHAHVEVVFDINGKDRMVF 279 >gi|154173807|ref|YP_001408445.1| modification methylase HemK [Campylobacter curvus 525.92] gi|112802935|gb|EAU00279.1| modification methylase HemK [Campylobacter curvus 525.92] Length = 278 Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 74/247 (29%), Positives = 123/247 (49%), Gaps = 21/247 (8%) Query: 16 GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSL-KHESIHRILGWRDFYNVRLTLSSDTFEP 74 G+S+ + ++ + L D +F A+VR ++E + I DFY + ++ P Sbjct: 34 GMSAEWIFLNLSADLADESGYF---ALVRRFCEYEPLGYITSKADFYGLNFSVRKGVLIP 90 Query: 75 RPETELLVDSALAF--SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCK 132 RPETE+LVD +L +LP R+ ++GTG+G + + + SP K DI+ Sbjct: 91 RPETEILVDKSLEILVNLP------AARVAEIGTGSGIISICIALNSPA-KITATDINET 143 Query: 133 ALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYI-ESVIVDCLGLEVRDFD 191 AL++A+ NA GV +R + ++ + V G FD++VSNPPYI + +D L + Sbjct: 144 ALDLARENAAKFGVVDRIEFIKCAYLDDVSGEFDLLVSNPPYIAQDYKLDKFVLN----E 199 Query: 192 PRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK 251 P +L GG+ G + I K+ C E+GY+QK + + + F ++ Sbjct: 200 PHNALFGGLTGDEILKNIILLARNRRVKNLAC--EMGYDQKSSLEKALKFNG-FEAKFYQ 256 Query: 252 DYGGNDR 258 D G DR Sbjct: 257 DLAGFDR 263 >gi|323490904|ref|ZP_08096099.1| HemK-like protein [Planococcus donghaensis MPA1U2] gi|323395384|gb|EGA88235.1| HemK-like protein [Planococcus donghaensis MPA1U2] Length = 285 Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 79/251 (31%), Positives = 119/251 (47%), Gaps = 11/251 (4%) Query: 16 GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75 GLS +I + D Q I + K + + G +FY + +++D PR Sbjct: 37 GLSYSGLIASMRDEISDAQLENFWATIEQHAKGIPVQHLTGTEEFYGRKFRVNADVLIPR 96 Query: 76 PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135 PETE L++ L + K+++ + D+GTG+G + + + E P DIS ALE Sbjct: 97 PETEELIEETLQLIERHLVKKELA-LADIGTGSGIIAITMKCELPHANVTATDISQSALE 155 Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194 A NA T ++ D D +E +DVI+SNPPYI L VRDF+P Sbjct: 156 TAAQNAET--LNAEIDFRLGDLTKPIENEKWDVILSNPPYIAYSEAPDLSDSVRDFEPHH 213 Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAF---- 250 +L +GL+ Y +A+ + LNK G+ EIGY Q V ++ K +AF Sbjct: 214 ALFADNEGLALYEKMAEQFPKMLNKPGIIGFEIGYQQGKAVEKML---KDAFPDAFVYCK 270 Query: 251 KDYGGNDRVLL 261 KD NDR++ Sbjct: 271 KDINKNDRMVF 281 >gi|295397092|ref|ZP_06807204.1| protein-(glutamine-N5) methyltransferase [Aerococcus viridans ATCC 11563] gi|294974684|gb|EFG50399.1| protein-(glutamine-N5) methyltransferase [Aerococcus viridans ATCC 11563] Length = 292 Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 74/221 (33%), Positives = 105/221 (47%), Gaps = 21/221 (9%) Query: 52 HRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV---RILDLGTGT 108 I+G FY +S T PR ETE LV ++ I+K + R+LD+GTGT Sbjct: 73 QYIVGKAWFYGETFKVSPATLIPRQETEDLV----SYVADLIKKEHIAKDARVLDIGTGT 128 Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDV 167 G + + L + P + DIS AL IA+ NA V F D F V G FD+ Sbjct: 129 GIIAVTLKQLFPNLQVTATDISPDALNIARENAADKKVVIDFQL--GDLFKPVLGQEFDL 186 Query: 168 IVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227 I+SNPPYI S D + ++P ++L +G Y + D + +L K G E Sbjct: 187 IISNPPYIGSDETDVMSKSTVLYEPDLALFAEENGYQIYWRLFDQIHDYLAKPGYFIGEF 246 Query: 228 GYNQ-------KVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 GY Q D +R+ ++ VN +DY GNDR+L+ Sbjct: 247 GYQQGQSLLAGAKDRLRMTDAE----VNIIQDYAGNDRILV 283 >gi|206978498|ref|ZP_03239357.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacillus cereus H3081.97] gi|206743288|gb|EDZ54736.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacillus cereus H3081.97] Length = 283 Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 77/264 (29%), Positives = 124/264 (46%), Gaps = 25/264 (9%) Query: 11 LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70 LC V + ++++ + Q T I + ++ I ++G FY ++ + Sbjct: 28 LCHVLKTNRTGLLMNMREEITAEQEKSFTEFIHKHVEGIPIQYMIGHEMFYGRSFFVNEE 87 Query: 71 TFEPRPETELLVDSALAFSLPRIEKR---DVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 PRPETE L+ L RI++ + + + D+GTG+GA+ + L E+ V Sbjct: 88 VLIPRPETEELIVGVLE----RIDRHFNDEKLHVADIGTGSGAISITLSLENKNLHVYTV 143 Query: 128 DISCKALEIAKSNAVTNGVSERF--DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185 DI+ +++++AK NA T G F L S ++ + + L DV+VSNPPYI L Sbjct: 144 DIAQESIKVAKENAKTLGAEVTFYHGDLLSPFYETGQKL-DVVVSNPPYIPEEDWRGLSP 202 Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245 V++ +P+ +L GG DGL YR + + L K + + EIG Q DV K Sbjct: 203 VVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEIGIGQGEDV-------KGL 255 Query: 246 LVNAFK--------DYGGNDRVLL 261 L AF D G DR++ Sbjct: 256 LQQAFPHAHVEVVFDINGKDRMVF 279 >gi|262277607|ref|ZP_06055400.1| protein-(glutamine-N5) methyltransferase, release factor-specific [alpha proteobacterium HIMB114] gi|262224710|gb|EEY75169.1| protein-(glutamine-N5) methyltransferase, release factor-specific [alpha proteobacterium HIMB114] Length = 284 Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 62/224 (27%), Positives = 115/224 (51%), Gaps = 10/224 (4%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101 I + + + I +I+ + F+N L +S PRPETE+L++ I K+ ++ Sbjct: 61 INQRISKKPISKIINQKSFWNFDLDVSKKVLIPRPETEVLIEMVTK----EINKKKNLKF 116 Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF-SS 160 LD+G G+G + ++LL++ G G+DIS A+ K N + R L+ + F Sbjct: 117 LDIGCGSGCISISLLEQYKKSVGTGIDISKDAIVNTKINLSNYNLINRIKLLRKNIFIYK 176 Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLE--VRDFDPRISLDG-GIDGLSHYRTIADGVSRHL 217 + FD+I+SNPPY++ + D + L+ ++ ++P+ +L G +GL Y+ I ++ Sbjct: 177 TDKKFDLIISNPPYLK--LSDYISLDPGIKKYEPKEALIGDNKEGLRFYKEIIKKFKNNI 234 Query: 218 NKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 +G + EIG NQ + + ++ +V+ +K R LL Sbjct: 235 KLNGYLAFEIGDNQFMQINKLLILNGFIVVSKYKLINNQIRCLL 278 >gi|296126693|ref|YP_003633945.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Brachyspira murdochii DSM 12563] gi|296018509|gb|ADG71746.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Brachyspira murdochii DSM 12563] Length = 287 Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 69/226 (30%), Positives = 111/226 (49%), Gaps = 11/226 (4%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101 I R L +E + I ++FY + S+ PRPETE ++D L ++ + +D + I Sbjct: 63 IERRLNYEPLAYITNKKEFYGFDFYVDSNVLIPRPETEEIIDLVLDYT----KDKDNISI 118 Query: 102 LDLGTGTGAVCLALLK----ESPFFKGVGVDISCKALEIAKSNAVTNGVSERF-DTLQSD 156 D+ +G+G + + L K ++ ++IS A EI NA E+F + + +D Sbjct: 119 CDVCSGSGNIAVTLKKLFIEQNKNIDITAIEISNGAAEITNKNAFNILGDEKFINIINAD 178 Query: 157 WFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215 + E FD+IVSN PY+ D L ++ DF+P +L G DGL YR + + Sbjct: 179 ALKYIPEKKFDIIVSNAPYVPLKDKDSLQKDL-DFEPFNALYSGDDGLDFYRAFLNIIDI 237 Query: 216 HLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 +L +G EIGYNQ ++ I + + KD G DR L+ Sbjct: 238 YLKDNGAFFFEIGYNQAYSLIDICSNLNINNTEVKKDLNGKDRFLV 283 >gi|257791637|ref|YP_003182243.1| modification methylase, HemK family [Eggerthella lenta DSM 2243] gi|257475534|gb|ACV55854.1| modification methylase, HemK family [Eggerthella lenta DSM 2243] Length = 345 Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 78/310 (25%), Positives = 125/310 (40%), Gaps = 57/310 (18%) Query: 7 SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66 + L TGLS ++ + + L +R L + R K E + I G F ++ + Sbjct: 30 AQWLLSEATGLSRIELYANFEQPLSMEERDVLRAYVTRRGKGEPLQYITGEVGFRHITVK 89 Query: 67 LSSDTFEPRPETELLVDSAL---------------------------------------- 86 + PRPETE+LV AL Sbjct: 90 VRPGVLIPRPETEVLVSEALALLPAAPKRVAQHAWPEDDLPPVPWPEGEAGEQRPERTAD 149 Query: 87 ------------AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134 A P E +++ + DL TG+G + ++ E P + V DI +A+ Sbjct: 150 QGVAEDESTPAVASGEPAPEPPELL-VADLCTGSGCIACSVAYEHPLARVVATDIVPEAV 208 Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIESVIVDCLGLEVRDF 190 +A+ N + +R + L D V+ G FD++VSNPPY+ + ++D + EV +F Sbjct: 209 ALARDNVAALELGDRVEVLSCDLGEGVDPTLMGAFDLVVSNPPYVPTAVMDDIPREVAEF 268 Query: 191 DPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAF 250 +P ++LDGG DGL R + R L + G + E+ + R+ E V Sbjct: 269 EPALALDGGADGLDVLRRLLPWCRRALKEGGGFAFELHETCLDEAARLAEEAGFSDVRVT 328 Query: 251 KDYGGNDRVL 260 D G RVL Sbjct: 329 ADLAGRPRVL 338 >gi|118594304|ref|ZP_01551651.1| modification methylase, HemK family protein [Methylophilales bacterium HTCC2181] gi|118440082|gb|EAV46709.1| modification methylase, HemK family protein [Methylophilales bacterium HTCC2181] Length = 283 Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 67/206 (32%), Positives = 105/206 (50%), Gaps = 12/206 (5%) Query: 57 WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116 W DFY ++ T PR +TEL++D + + ++ ++ILDLGTG+G + L L Sbjct: 81 W-DFYGRTYYINQQTLIPRQDTELMIDILIQNN----KEDSSLKILDLGTGSGVIGLTLA 135 Query: 117 KESPFFKG--VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPP 173 FF DIS +A+++AK N +G+ + ++S+WF + G FDVIVSNPP Sbjct: 136 HH--FFNAQITLSDISSEAIKVAKINGGNSGL-KNIQFVESNWFEKIPPGKFDVIVSNPP 192 Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233 YI E+ + P+I+L + GL I ++LNK GL +E G++Q Sbjct: 193 YIPKNDKHLKHPELLE-QPQIALMSELGGLQAITDIVKNAKQYLNKAGLLMIEHGFDQAP 251 Query: 234 DVVRIFESRKLFLVNAFKDYGGNDRV 259 V IF + V ++D R+ Sbjct: 252 TVKNIFTANTFNNVRQYQDINSRIRI 277 >gi|269128127|ref|YP_003301497.1| modification methylase, HemK family [Thermomonospora curvata DSM 43183] gi|268313085|gb|ACY99459.1| modification methylase, HemK family [Thermomonospora curvata DSM 43183] Length = 286 Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 74/238 (31%), Positives = 116/238 (48%), Gaps = 10/238 (4%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ V G+ ++ PDS D RF+ + R E + I G F + L Sbjct: 26 DAEELAAAVHGVKRSELHTVPDSAFD--ARFW--EGVARREAGEPLQHITGRAFFRYLEL 81 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 + F PRPETE++V AL +L +++ RD + ++DLGTG+GA+ L++++E+P + Sbjct: 82 KVGPGVFIPRPETEVMVGWALE-TLHQMDVRDPL-VVDLGTGSGAIALSIVQEAPSARVH 139 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVIVDC 182 V+ A A N + R +D+ +++ G D+++SNPPYI + Sbjct: 140 AVEKDPTAFVYATRNVEELDLRGRVRLHLADFADALQELNGTVDLVISNPPYIPMSEWEY 199 Query: 183 LGLEVRDFDPRISL-DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 + EVRD DP +L GG DGL RT+ R L G +VE Q V +F Sbjct: 200 VPPEVRDHDPAAALWGGGDDGLDAIRTVERTARRLLRPGGHVAVEHSDMQGNAVYWVF 257 >gi|313885112|ref|ZP_07818864.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Eremococcus coleocola ACS-139-V-Col8] gi|312619803|gb|EFR31240.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Eremococcus coleocola ACS-139-V-Col8] Length = 283 Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 72/217 (33%), Positives = 112/217 (51%), Gaps = 14/217 (6%) Query: 47 KHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAF---SLPRIEKRDVVRILD 103 + + + +LG +F +S T PR ET L+D A+ F S P +ILD Sbjct: 70 QGQPLQYLLGRANFRGTWYQVSLATLIPREETGGLIDLAIKFFGDSAP-------TQILD 122 Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-E 162 +GTGTG + + L K P + V DIS +AL+IA+ NA T + D SD +V + Sbjct: 123 IGTGTGILAIELAKVFPQAQVVASDISEEALKIARVNAETMAI--HVDFFLSDVCKTVPK 180 Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL 222 + +IVSNPPYI +D + V +++P ++L +GL+ Y+ +A + ++K GL Sbjct: 181 KKYQLIVSNPPYIALDELDLMDPSVINYEPHLALFADQEGLAIYQKLAQELPAFIDKQGL 240 Query: 223 CSVEIGYNQKVDVVRIF-ESRKLFLVNAFKDYGGNDR 258 +EIG+ Q V IF E+ + KD+ DR Sbjct: 241 ILLEIGFRQGQKVAAIFKEAFPQAEITIHKDFYDKDR 277 >gi|312141078|ref|YP_004008414.1| sam dependent methyltransferase [Rhodococcus equi 103S] gi|311890417|emb|CBH49735.1| SAM dependent methyltransferase [Rhodococcus equi 103S] Length = 268 Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 66/200 (33%), Positives = 98/200 (49%), Gaps = 14/200 (7%) Query: 50 SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109 + +LGW +F R+ + F PR TELLV A A +++ DVV +DL G+G Sbjct: 57 PLEHVLGWVEFCGRRIDIEQGVFVPRRRTELLVQEAAAL----VDQGDVV--VDLCCGSG 110 Query: 110 AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG----VSERFDTLQSDWFSSVEGLF 165 A+ +A+ +SP + D+ A+ A+ N G + FD L + + G Sbjct: 111 ALGVAIAADSPGVELHSADLDPVAVRCARRNVEPVGGHVHEGDLFDALPEE----LRGRV 166 Query: 166 DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225 DV+V+N PY+ S + + E RD +PR +LDGG DGL R +A+ R L+ G V Sbjct: 167 DVVVANVPYVPSDAIALMPPEARDHEPRAALDGGPDGLDVQRAVAEAAPRWLSPGGRLLV 226 Query: 226 EIGYNQKVDVVRIFESRKLF 245 E +Q V IF L Sbjct: 227 ETSIHQASSSVGIFTRAGLL 246 >gi|223039659|ref|ZP_03609945.1| modification methylase HemK [Campylobacter rectus RM3267] gi|222879042|gb|EEF14137.1| modification methylase HemK [Campylobacter rectus RM3267] Length = 282 Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 75/259 (28%), Positives = 121/259 (46%), Gaps = 19/259 (7%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 R + + L R G+ + ++ + L+D + +F R HE + I G FY + Sbjct: 27 RVAKALLMRQLGVKIEWIFLNLNRELEDSEGYFALAK--RFANHEPLEYITGEVGFYGLS 84 Query: 65 LTLSSDTFEPRPETELLVDSALAF--SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + PRPETE+LV+ +L +LP + +V + +G+G ++CLAL + Sbjct: 85 FNVKKGVLIPRPETEILVEKSLEVLSNLPARNEPPLVAEIGVGSGIISICLALNSSA--- 141 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182 K + DIS AL +A+ NA GV +R + ++ + + G FD++VSNPPYI Sbjct: 142 KIIASDISDDALNLARENAAKFGVEDRIEFVKCAYLDQIYGRFDLLVSNPPYIAQ----- 196 Query: 183 LGLEVRDF---DPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 E+ F +P +L GG G + I K C E+GY+QK + + Sbjct: 197 -DYELDKFVLNEPHEALFGGAAGDEILKNIIFVAKNRGVKYLAC--EMGYDQKASLESVL 253 Query: 240 ESRKLFLVNAFKDYGGNDR 258 E F ++D G DR Sbjct: 254 ELSG-FEAEFYRDLAGFDR 271 >gi|256850892|ref|ZP_05556281.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Lactobacillus jensenii 27-2-CHN] gi|260661106|ref|ZP_05862020.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Lactobacillus jensenii 115-3-CHN] gi|282934196|ref|ZP_06339474.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Lactobacillus jensenii 208-1] gi|297205769|ref|ZP_06923164.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Lactobacillus jensenii JV-V16] gi|256615954|gb|EEU21142.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Lactobacillus jensenii 27-2-CHN] gi|260548043|gb|EEX24019.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Lactobacillus jensenii 115-3-CHN] gi|281301810|gb|EFA94076.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Lactobacillus jensenii 208-1] gi|297148895|gb|EFH29193.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Lactobacillus jensenii JV-V16] Length = 280 Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 80/265 (30%), Positives = 124/265 (46%), Gaps = 17/265 (6%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 ++ D + GL+ + + DS + L + ++ S ILG+ F Sbjct: 20 SIEDISYLISERAGLTPSEFQLKQDSEASSKLEKQLQKDFKKLARNVSPQYILGYAWFLG 79 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 ++ + PR ETE LV+ AL D +RILDLGTG+GA+ +AL KE+ Sbjct: 80 YKIMVQRGVLIPRFETEELVEWALDHL------HDGMRILDLGTGSGAIMVALAKEASK- 132 Query: 123 KGV------GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE 176 KG+ DIS AL + N +T + +++ +E FD+I+SNPPYI Sbjct: 133 KGIKDLTLYASDISDSALRTCEENFLTFDLD--VTVRKANVLIGLEK-FDLIISNPPYIR 189 Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236 + + V +P +L GG DGL YR A V HL +G +E G+++K D+ Sbjct: 190 PEEKNLMDSNVLQNEPEEALFGGKDGLEFYRRFAKQVREHLTDEGQFFLEFGFSEKDDLA 249 Query: 237 RIF-ESRKLFLVNAFKDYGGNDRVL 260 ++F E F V D G R++ Sbjct: 250 KLFTEELPDFKVEFKDDLAGKPRMV 274 >gi|325267685|ref|ZP_08134336.1| protein-(glutamine-N5) methyltransferase [Kingella denitrificans ATCC 33394] gi|324980809|gb|EGC16470.1| protein-(glutamine-N5) methyltransferase [Kingella denitrificans ATCC 33394] Length = 312 Score = 95.9 bits (237), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 56/144 (38%), Positives = 81/144 (56%), Gaps = 2/144 (1%) Query: 91 PRIEKRDVV-RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 P IE ++V R LDL TG+G + + + P + VDIS ALE+A N + ER Sbjct: 136 PWIEYPELVHRALDLCTGSGCLAIQMAAHYPAAQIDAVDISLDALEVAAVNVEDYSLQER 195 Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209 + +D F +EG +D+IVSNPPY+++ VD L E +P ++L G DGL R I Sbjct: 196 IQLVHTDLFEGLEGTYDLIVSNPPYVDAESVDALPEEYL-HEPELALGSGEDGLDATREI 254 Query: 210 ADGVSRHLNKDGLCSVEIGYNQKV 233 ++ LN G+ VEIG+N+ V Sbjct: 255 LLQAAKFLNPRGVLLVEIGHNRDV 278 >gi|319650893|ref|ZP_08005030.1| modification methylase [Bacillus sp. 2_A_57_CT2] gi|317397491|gb|EFV78192.1| modification methylase [Bacillus sp. 2_A_57_CT2] Length = 284 Score = 95.9 bits (237), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 74/262 (28%), Positives = 118/262 (45%), Gaps = 26/262 (9%) Query: 11 LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70 + R + L++ + ++P+ VLD+ Q+ A+ + + I+G +FY ++ D Sbjct: 34 MTRASFLANLREDLNPE-VLDEFQK-----AVQSHAAGQPVQYIIGSEEFYGRAFQVNED 87 Query: 71 TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130 PRPETE LV +AL + + + D+GTG+GA+ + + E P DI Sbjct: 88 VLIPRPETEELVYNALQKINKLFGSVNGLEMADIGTGSGAIAVTMKLEKPELNVTATDIY 147 Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFS---SVEGLFDVIVSNPPYIESVIVDCLGLEV 187 LE+A+ NA NG D Q D S FD+I+SNPPYI ++ + V Sbjct: 148 GPTLELAEKNAEQNGA--EIDFYQGDLLQPLISKGKKFDIILSNPPYIPEKDIEWMSDIV 205 Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLV 247 + +P +L G DGL YR + + + + E+G Q E+ L L Sbjct: 206 TEHEPHRALFAGEDGLDLYRRFMEELPAVIKDRAIIGFEVGAGQS-------EAVSLLLK 258 Query: 248 NAFK--------DYGGNDRVLL 261 AF D G DR++ Sbjct: 259 QAFPQANVETVYDINGKDRMVF 280 >gi|300814561|ref|ZP_07094815.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Peptoniphilus sp. oral taxon 836 str. F0141] gi|300511329|gb|EFK38575.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Peptoniphilus sp. oral taxon 836 str. F0141] Length = 276 Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 64/206 (31%), Positives = 103/206 (50%), Gaps = 19/206 (9%) Query: 32 DRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLP 91 D ++FF + +S + + IL F + ++ PR ETE+ V+ Sbjct: 53 DEEKFFRILKMRQS--GQPLQYILEETYFMGKKFKINRGVLIPRKETEISVEVITDI--- 107 Query: 92 RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI---AKSNAVTN--GV 146 I+K L++G G+G V + + + +I+C L+I A N TN + Sbjct: 108 -IKKNKCKSFLEIGCGSGIVTIMV--------NLLTNINCSCLDISDLAIENTKTNIKNL 158 Query: 147 SERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206 + +S+ F +VEG FD+I SNPPYI++ + L EV++F+P +LDGG GL Y Sbjct: 159 GAKVQVFKSNLFENVEGKFDIIYSNPPYIKTGEIKNLQDEVKNFEPISALDGGESGLEFY 218 Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQK 232 + I + +LN +G EIGY+QK Sbjct: 219 KKIIKQSTNYLNDNGFLIFEIGYDQK 244 >gi|256390408|ref|YP_003111972.1| modification methylase, HemK family [Catenulispora acidiphila DSM 44928] gi|256356634|gb|ACU70131.1| modification methylase, HemK family [Catenulispora acidiphila DSM 44928] Length = 303 Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 72/239 (30%), Positives = 108/239 (45%), Gaps = 13/239 (5%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ V G+ + PD D R I R E + I G F + L Sbjct: 46 DAEELAAWVHGVRRTDLHRVPDHDFDAR----YWEVIARRANREPLQHITGAAYFRYLEL 101 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR--ILDLGTGTGAVCLALLKESPFFK 123 + F PRPETE++V +++ ++ DV I+DL TG+GA+ L++ +E P + Sbjct: 102 AVGPGVFVPRPETEVMV----GWAIDKLRALDVAEPLIVDLCTGSGAIALSIAQEVPRAR 157 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIV 180 V++S A A N + ER +D +++ +G DV+VSNPPYI Sbjct: 158 VHAVELSEDAYTWASRNIAASEAGERVTLHLADAVTALPELDGRVDVVVSNPPYIPLTEW 217 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 + + E RD DP ++L G DGL R + R L G + E Q +V RIF Sbjct: 218 EYVAPEARDHDPELALFSGPDGLDLIRGLERTAQRLLKPGGWSAFEHSDKQGGEVQRIF 276 >gi|255348386|ref|ZP_05380393.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Chlamydia trachomatis 70] gi|255502927|ref|ZP_05381317.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Chlamydia trachomatis 70s] Length = 290 Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 70/209 (33%), Positives = 99/209 (47%), Gaps = 6/209 (2%) Query: 54 ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113 I G F V L ++ PR ETE+ V+ + + EK D+ G+G + L Sbjct: 69 IHGKVHFLGVELQVTPQVLIPRQETEIFVEQIIGYLQMHKEK---TTFYDVCCGSGCIGL 125 Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173 A+ K P + DIS +AL IA+SNA +N ++ D L D F DV+V NPP Sbjct: 126 AVRKHCPHVRVTLSDISPEALAIAESNARSNALA--VDFLLGDLFDPFSFPADVLVCNPP 183 Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233 Y+ L EVR +P +L GG+ GL Y IA + + L G+ +EIG Q Sbjct: 184 YLSYKEFFELDPEVRCHEPWKALVGGVSGLEFYHRIATHIHKILVSGGVGWLEIGSTQGE 243 Query: 234 DVVRIFESRKLFLVNAFKDYGGNDRVLLF 262 DV +IF ++ + KDY DR Sbjct: 244 DVKQIFHAKGI-RGRVLKDYAQLDRFFFL 271 >gi|325288194|ref|YP_004263984.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Cellulophaga lytica DSM 7489] gi|324323648|gb|ADY31113.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Cellulophaga lytica DSM 7489] Length = 283 Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 71/240 (29%), Positives = 115/240 (47%), Gaps = 9/240 (3%) Query: 24 VDPDSVL--DDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELL 81 ++P+ V+ D+ FL + + KH I ILG F + ++++ PRPETE L Sbjct: 44 LEPNYVVTKDEESTLFLV--VDKLKKHIPIQYILGAAHFMGLDFNVNTNVLIPRPETEEL 101 Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 V ++ L + + ILD+GTG+G + + L K P K +DIS +A+ +AKSNA Sbjct: 102 V----SWILNEVNVNQEIAILDIGTGSGCIAITLAKNLPKAKVFALDISKEAILVAKSNA 157 Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL-DGGI 200 N V+ F S++ F++IVSNPPY+ + + V + +P ++L Sbjct: 158 EANNVTVTFLEQNILEEPSLKQKFNIIVSNPPYVRDLEKKEMSANVLEHEPNLALFVSDN 217 Query: 201 DGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 + L Y+ I + HL ++G EI + + KD GNDR+L Sbjct: 218 NPLVFYKAITNFSVNHLRENGKLFFEINQYLGEQTKELLVGLNYINIKLKKDMYGNDRML 277 >gi|255975087|ref|ZP_05425673.1| modification methylase HemK [Enterococcus faecalis T2] gi|307285598|ref|ZP_07565737.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis TX0860] gi|255967959|gb|EET98581.1| modification methylase HemK [Enterococcus faecalis T2] gi|306502822|gb|EFM72087.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis TX0860] Length = 277 Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 63/212 (29%), Positives = 104/212 (49%), Gaps = 17/212 (8%) Query: 54 ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113 +LG +FY ++ T PRPETE LV+ L + + ++D+GTGTGA+ + Sbjct: 73 LLGQAEFYGHSFIVNEHTLIPRPETEELVERCL-----KANPDTPLTVVDVGTGTGAIAI 127 Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVS 170 +L P ++ + +D+S +AL +AK NA G F + LQ + D+++S Sbjct: 128 SLKLARPNWRVIAIDLSEEALTVAKQNAQALGAGIEFYHGNGLQPVASEKI----DLLIS 183 Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230 NPPYI + VR ++P+ +L +GL+ Y+ + L DG EIG+ Sbjct: 184 NPPYISEQEWHLMDASVRTYEPKTALFAENNGLALYQQLIHESQTMLKADGKIYFEIGFQ 243 Query: 231 QKVDVVRIFES---RKLFLVNAFKDYGGNDRV 259 Q + + + +K + KD GNDR+ Sbjct: 244 QGAALQELLSAAYPQKTIKIE--KDLSGNDRL 273 >gi|199597586|ref|ZP_03211015.1| Methylase of polypeptide chain release factor [Lactobacillus rhamnosus HN001] gi|199591609|gb|EDY99686.1| Methylase of polypeptide chain release factor [Lactobacillus rhamnosus HN001] Length = 276 Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 70/253 (27%), Positives = 114/253 (45%), Gaps = 12/253 (4%) Query: 10 FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69 + R S ++ D + D R F + + R E I G F+ ++ Sbjct: 30 LMTRADWTPSQLILHRQDPMPDAAWRQFQAD-VARLANFEPAQYITGQAPFFGTMFAVTP 88 Query: 70 DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129 PR ETE LV E+ + LD+GTG+GA+ L L ++ P D+ Sbjct: 89 AVLIPRFETEELVAWVAE------EQTNAQAGLDMGTGSGAIGLTLARQLPQIDMTLSDV 142 Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRD 189 S AL +AK NA V+ F T SD F+ + G FD +V+N PYI + Sbjct: 143 SPSALAVAKQNAAAQKVNVHFVT--SDLFNHLPGRFDFVVTNLPYIAPEETSVMDQSTLR 200 Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249 ++P+++L GL+ + + +HLN G +E GY+Q+ + ++F + KL A Sbjct: 201 YEPKLALFADHHGLALFERFVTELPQHLNPLGAAYLEFGYHQEPALRQLF-AEKLPQAQA 259 Query: 250 F--KDYGGNDRVL 260 +D G+ R++ Sbjct: 260 TFRRDMAGHPRMV 272 >gi|313631913|gb|EFR99058.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Listeria seeligeri FSL N1-067] Length = 283 Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 78/247 (31%), Positives = 111/247 (44%), Gaps = 10/247 (4%) Query: 16 GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75 GLS ++ ++ + L+ R L E + IL FY ++ D PR Sbjct: 34 GLSRSELWMEINRELEPNHEKQFQADFERYLSGEPVQYILKTAPFYGYDFLVTEDVLIPR 93 Query: 76 PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135 PETE LV A AF ++K + +LD+ TG+G + + L K P DIS AL Sbjct: 94 PETEELVACAEAF----LKKNPLPTVLDVCTGSGIIAITLKKAFPEVLVTASDISGPALA 149 Query: 136 IAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDP 192 IAK NA+ RF D L+S F FD++++NPPYI + V +P Sbjct: 150 IAKKNALLLNADVRFVETDLLES--FKQNGERFDMVLANPPYISEAEKAEMSDYVLKNEP 207 Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE-SRKLFLVNAFK 251 ++L DGL+ Y + + LN VEIGY Q V +F+ S +V K Sbjct: 208 ALALFAENDGLAIYERFVEDLQYVLNPSFWVGVEIGYTQGEKVKDLFQKSYPHSMVVIHK 267 Query: 252 DYGGNDR 258 D DR Sbjct: 268 DINSKDR 274 >gi|307719605|ref|YP_003875137.1| hypothetical protein STHERM_c19290 [Spirochaeta thermophila DSM 6192] gi|306533330|gb|ADN02864.1| hypothetical protein STHERM_c19290 [Spirochaeta thermophila DSM 6192] Length = 282 Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 79/267 (29%), Positives = 120/267 (44%), Gaps = 26/267 (9%) Query: 6 DSHSFLCRVTGLSSHQVIVD-PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 D+ L + +GLS ++ P+ V + R F + + R L E + I G ++FY + Sbjct: 26 DALLILSQASGLSKEALLASYPEPVPPETGRTF-ESLLARRLAGEPVSYIRGLKEFYGLT 84 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRD--VVRILDLGTGTGAVCLALLKESP-F 121 + PRP+TE+LVD+AL +RD + I D TGTG + +A+L +P Sbjct: 85 FHVDRRVLVPRPDTEVLVDAALTLI-----RRDPAITHIHDACTGTGCILIAILAHTPRP 139 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTL----QSDWFSSVEGLFDVIVSNPPYI-- 175 D+S +AL++ + NA S T+ +SD SSV G F +I +NPPY+ Sbjct: 140 LTASASDVSEEALDVFRENA-----SRLLGTVPPHHRSDLLSSVPGRFHLITANPPYLTE 194 Query: 176 -ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234 E ++ G +P ++L G DGLSH R + HL G E Q Sbjct: 195 EEVAVMKASGWP----EPALALASGPDGLSHIRRLIPQALDHLVPGGYLICEHHDAQADA 250 Query: 235 VVRIFESRKLFLVNAFKDYGGNDRVLL 261 V ++ V D G R L Sbjct: 251 VAELYREAGYTHVRHLPDLAGRRRATL 277 >gi|315148531|gb|EFT92547.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis TX4244] Length = 277 Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 68/260 (26%), Positives = 116/260 (44%), Gaps = 17/260 (6%) Query: 8 HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67 H G Q ++ + + L + + L +LG +FY + Sbjct: 27 HYVFLERKGWDKTQWLLHMQEEMPKEEEKQLKTDLAQLLTDYPAQYLLGQAEFYGHSFIV 86 Query: 68 SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 + T PRPETE LV+ L + + ++D+GTGTGA+ ++L P ++ + + Sbjct: 87 NEHTLIPRPETEELVERCL-----KANPDTPLTVVDVGTGTGAIAISLKLARPNWRVIAI 141 Query: 128 DISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184 D+S +AL +AK NA G F + LQ + D+++SNPPYI + Sbjct: 142 DLSEEALTVAKQNAQVLGADIEFYHGNGLQPVASEKI----DLLISNPPYISEQEWHLMD 197 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES--- 241 VR ++P+ +L +GL+ Y+ + L DG EIG+ Q + + + Sbjct: 198 ASVRTYEPKTALFAENNGLALYQQLIHESQTMLKADGKIYFEIGFQQGAALQELLSAAYP 257 Query: 242 RKLFLVNAFKDYGGNDRVLL 261 +K + KD GNDR+ + Sbjct: 258 QKTIKIE--KDLSGNDRLAI 275 >gi|229142070|ref|ZP_04270595.1| Protein hemK [Bacillus cereus BDRD-ST26] gi|228641359|gb|EEK97665.1| Protein hemK [Bacillus cereus BDRD-ST26] Length = 213 Score = 95.5 bits (236), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 72/221 (32%), Positives = 107/221 (48%), Gaps = 25/221 (11%) Query: 54 ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR---DVVRILDLGTGTGA 110 ++G FY ++ + PRPETE L+ L RIE+ + + + D+GTG+GA Sbjct: 1 MIGHEMFYGRSFFVNEEVLIPRPETEELIVGVLE----RIERHFSDEKIHVADIGTGSGA 56 Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF--DTLQSDWFSSVEGLFDVI 168 + + L E+ VDI+ ++E+AK NA T G F L S ++ + + L DV+ Sbjct: 57 ISITLALENKNLHVYTVDIAQGSIEVAKENAKTLGAEVTFYHGDLLSPFYETGQKL-DVV 115 Query: 169 VSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228 VSNPPYI L V++ +P+ +L GG DGL YR + + L K + + EIG Sbjct: 116 VSNPPYIPEEDWRGLSPVVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEIG 175 Query: 229 YNQKVDVVRIFESRKLFLVNAFK--------DYGGNDRVLL 261 Q DV K L AF D G DR++ Sbjct: 176 IGQGEDV-------KGLLQQAFPHAHVEVVFDINGKDRMVF 209 >gi|268609960|ref|ZP_06143687.1| methyltransferase [Ruminococcus flavefaciens FD-1] Length = 282 Score = 95.5 bits (236), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 70/211 (33%), Positives = 103/211 (48%), Gaps = 13/211 (6%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110 + +LG +FY LS D PRP+TE L+++ L R + +I DL +G+G Sbjct: 68 LQYLLGEWEFYGYPFRLSEDVLIPRPDTETLIENVLEIC--RRKGMRSPKIADLCSGSGC 125 Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQ---SDWFSSVEGL 164 + + L KE P + V++S AL+I K NA N R D L+ +D F + Sbjct: 126 IAITLKKELPLAEVSAVELSGGALDIIKENASLNDADIRIIKGDVLKKETADMFRDM--- 182 Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224 D+IVSNPPY+ + + L EVR ++P ++L GG DGL YRT+ L G Sbjct: 183 -DIIVSNPPYVTAKEMAELQQEVR-YEPEMALYGGEDGLDFYRTMTALWKYSLADGGWLL 240 Query: 225 VEIGYNQKVDVVRIFESRKLFLVNAFKDYGG 255 E G Q+ DV +I + +D G Sbjct: 241 YEYGDGQQNDVEKILNDNDFDNITLSRDLAG 271 >gi|315032690|gb|EFT44622.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis TX0017] gi|315143715|gb|EFT87731.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis TX2141] Length = 277 Score = 95.5 bits (236), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 68/260 (26%), Positives = 116/260 (44%), Gaps = 17/260 (6%) Query: 8 HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67 H G Q ++ + + L + + L +LG +FY + Sbjct: 27 HYVFLERKGWDKTQWLLHMQEEMPKEEEKQLKTDLAQLLTDYPAQYLLGQAEFYGHSFIV 86 Query: 68 SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 + T PRPETE LV+ L + + ++D+GTGTGA+ ++L P ++ + + Sbjct: 87 NEHTLIPRPETEELVERCL-----KANPDTPLTVVDVGTGTGAIAISLKLARPNWRVIAI 141 Query: 128 DISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184 D+S +AL +AK NA G F + LQ + D+++SNPPYI + Sbjct: 142 DLSEEALTVAKKNAQVLGADIEFYHGNGLQPVASEKI----DLLISNPPYISEQEWHLMD 197 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES--- 241 VR ++P+ +L +GL+ Y+ + L DG EIG+ Q + + + Sbjct: 198 ASVRTYEPKTALFAENNGLALYQQLIHESQTMLKADGKIYFEIGFQQGAALQELLSAAYP 257 Query: 242 RKLFLVNAFKDYGGNDRVLL 261 +K + KD GNDR+ + Sbjct: 258 QKTIKIE--KDLSGNDRLAI 275 >gi|326427282|gb|EGD72852.1| hypothetical protein PTSG_04580 [Salpingoeca sp. ATCC 50818] Length = 301 Score = 95.5 bits (236), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 63/182 (34%), Positives = 98/182 (53%), Gaps = 16/182 (8%) Query: 49 ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108 E + +LG DF + LT+ S PRPETE+LVD ++ ++ + L++G G+ Sbjct: 80 EPLQYVLGEWDFRDQTLTMRSPVLIPRPETEVLVD----LIQRKLRQQHGLHFLEIGVGS 135 Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD---------TLQSDWFS 159 GA+ L+LL E+P + G+D+ A+++ + NA GV++R T S FS Sbjct: 136 GAISLSLLHENPSWTATGIDLDDAAIQLTQHNASRCGVADRLTLHKQDITTATPSSPCFS 195 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 S G FD +VSNPPYI + L E+R ++ ++L GG DGL R I D +++ Sbjct: 196 S--GPFDFVVSNPPYIRRDEMPKLAPELR-YENDMALCGGEDGLDVTRAILDIAPHIISR 252 Query: 220 DG 221 G Sbjct: 253 TG 254 >gi|302536944|ref|ZP_07289286.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptomyces sp. C] gi|302445839|gb|EFL17655.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptomyces sp. C] Length = 281 Score = 95.5 bits (236), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 67/207 (32%), Positives = 101/207 (48%), Gaps = 9/207 (4%) Query: 40 NAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV 99 A+ R E + I G F + L + F PRPETE +VD +++ + DVV Sbjct: 56 EAVARREAREPLQHITGRAFFRYLELQVGPGVFVPRPETESVVD----WAIHAVRAMDVV 111 Query: 100 R--ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSD 156 I+DL TG+GA+ LA+ +E P + V++S AL + NA + V+ + D L + Sbjct: 112 EPLIVDLCTGSGAIALAMAQEVPRSRVHAVELSEDALRWTRKNAEGSRVTVHQGDALTA- 170 Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216 ++G D+++SNPPYI + + E RD DP ++L G DGL R I R Sbjct: 171 -LPELDGQVDLVISNPPYIPLTEWEYVAPEARDHDPEMALFSGEDGLDTIRGIERTAHRL 229 Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRK 243 L G+ +E Q V IF + Sbjct: 230 LRPGGIVVIEHADTQGGQVPWIFADER 256 >gi|119964526|ref|YP_946101.1| HemK family modification methylase [Arthrobacter aurescens TC1] gi|119951385|gb|ABM10296.1| putative modification methylase, HemK family [Arthrobacter aurescens TC1] Length = 294 Score = 95.5 bits (236), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 59/202 (29%), Positives = 95/202 (47%), Gaps = 1/202 (0%) Query: 38 LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97 L + + L + + I+GW DF R+++ F PR TE LV A + P +R Sbjct: 69 LNRMVDQRLSGQPLEHIVGWADFCGKRMSVGPGVFVPRRRTEFLVREAAMIAKPLTARRR 128 Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 V ++DL G+GA+ AL + DI A++ A+ N G + L Sbjct: 129 AV-VVDLCCGSGAIGAALNDLLGSCELHAADIDPAAVQCARRNVEPRGGTVHHGDLYGAL 187 Query: 158 FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217 + G D++++N PY+ + + + E R +PR++LDGG DGL R IA G ++ L Sbjct: 188 PRELRGKVDILLANAPYVPTESIGMMPPEARLHEPRVALDGGADGLDVQRRIALGAAQWL 247 Query: 218 NKDGLCSVEIGYNQKVDVVRIF 239 G +E Q ++ RI Sbjct: 248 GPGGAVVMETSGQQALETARIL 269 >gi|78046500|ref|YP_362675.1| protein methyltransferase HemK [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78034930|emb|CAJ22575.1| protein methyltransferase HemK [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 286 Score = 95.5 bits (236), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 73/221 (33%), Positives = 111/221 (50%), Gaps = 7/221 (3%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101 + R E + + G R F+ + L +S T PR +TE+LV+ +L R++ R+ Sbjct: 61 VQRREAGEPVAYLTGSRGFWTLDLAVSPATLIPRADTEVLVE----LALERLDTVPGRRV 116 Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 DLGTG+GA+ LA+ E P + + D S AL +A+ NA ++G+ D Q WF+ + Sbjct: 117 ADLGTGSGAIALAIASERPQAQVIATDASAAALAMARRNADSHGL-RNVDCRQGSWFAPL 175 Query: 162 EG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220 G FD+I SNPPYI + ++R ++P +L G DGL R I HL Sbjct: 176 AGEAFDLIASNPPYIAAHDPHLKQGDLR-YEPASALASGSDGLDDIRLIVADAPAHLVPG 234 Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 G +E G++Q V + +R V +D DRV L Sbjct: 235 GWLLLEHGWDQGAAVAELLAARGFAAVATHQDLERRDRVTL 275 >gi|257416747|ref|ZP_05593741.1| modification methylase HemK [Enterococcus faecalis AR01/DG] gi|257158575|gb|EEU88535.1| modification methylase HemK [Enterococcus faecalis ARO1/DG] Length = 277 Score = 95.5 bits (236), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 63/212 (29%), Positives = 104/212 (49%), Gaps = 17/212 (8%) Query: 54 ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113 +LG +FY ++ T PRPETE LV+ L + + ++D+GTGTGA+ + Sbjct: 73 LLGQAEFYGHSFIVNEHTLIPRPETEELVERCL-----KANPDTPLTVVDVGTGTGAIAI 127 Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVS 170 +L P ++ + +D+S +AL +AK NA G F + LQ + D+++S Sbjct: 128 SLKLARPNWRVIAIDLSEEALTVAKQNAQALGAGIEFYHGNGLQPVASEKI----DLLIS 183 Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230 NPPYI + VR ++P+ +L +GL+ Y+ + L DG EIG+ Sbjct: 184 NPPYISEQEWHLMDASVRTYEPKTALFAENNGLALYQQLIHESQTMLKADGKIYFEIGFQ 243 Query: 231 QKVDVVRIFES---RKLFLVNAFKDYGGNDRV 259 Q + + + +K + KD GNDR+ Sbjct: 244 QGATLQELLNAAYPQKTIKIE--KDLSGNDRL 273 >gi|2576396|gb|AAB82325.1| possible protoporphyrinogen oxidase [Neisseria gonorrhoeae] Length = 218 Score = 95.5 bits (236), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 65/162 (40%), Positives = 89/162 (54%), Gaps = 12/162 (7%) Query: 44 RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103 R L E + ILG R+FY +R T++ + PRPETE LV++ LA LP + R+ D Sbjct: 66 RRLNGEPVAYILGVREFYGIRFTVNPNVLIPRPETEHLVEAVLA-RLP-----ENGRVWD 119 Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS--- 160 LGTG+GAV + + E P DIS ALE A+ NA G R + WF + Sbjct: 120 LGTGSGAVAVTVALERPDAFVRASDISTPALETARKNAADLGA--RVEFAHGSWFDTDMP 177 Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202 E +D+IVSNPPYIE+ ++R F+P+I+L DG Sbjct: 178 SERQWDIIVSNPPYIENGDKHLSQGDLR-FEPQIALTDFSDG 218 >gi|237715307|ref|ZP_04545788.1| conserved hypothetical protein [Bacteroides sp. D1] gi|262405148|ref|ZP_06081698.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacteroides sp. 2_1_22] gi|294643552|ref|ZP_06721358.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacteroides ovatus SD CC 2a] gi|294807059|ref|ZP_06765878.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacteroides xylanisolvens SD CC 1b] gi|229444616|gb|EEO50407.1| conserved hypothetical protein [Bacteroides sp. D1] gi|262356023|gb|EEZ05113.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacteroides sp. 2_1_22] gi|292641127|gb|EFF59339.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacteroides ovatus SD CC 2a] gi|294445758|gb|EFG14406.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacteroides xylanisolvens SD CC 1b] Length = 278 Score = 95.5 bits (236), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 81/257 (31%), Positives = 117/257 (45%), Gaps = 12/257 (4%) Query: 12 CRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDT 71 C + GL + + + D +L + ++ L N I R K+E I I G +F ++S Sbjct: 30 CDMLGLDALDIYMGKDIILSECKQRELENIIFRLQKNEPIQYIRGVAEFCGRNFKVASGV 89 Query: 72 FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131 PRPET LV+ + E + R+LD+GTG+G + ++L K+ P + DIS Sbjct: 90 LIPRPETAELVELIVE------ENPNARRLLDIGTGSGCIAISLDKKLPDAEVEAWDISE 143 Query: 132 KALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVR 188 +AL IA+ N RF D L DW FDVIVSNPPY+ + + V Sbjct: 144 EALAIARKNNDALEARVRFLQRDVLADDWEKIPS--FDVIVSNPPYVTETEKNEMDANVL 201 Query: 189 DFDPRISL-DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLV 247 D++P ++L D L Y IA S L G EI + I E + V Sbjct: 202 DWEPGLALFVPDEDPLRFYNRIARLGSELLLPGGKLYFEINQAYGRETAHILEMNQYRDV 261 Query: 248 NAFKDYGGNDRVLLFCR 264 KD G DR++ R Sbjct: 262 RVIKDIFGKDRIVTANR 278 >gi|256763196|ref|ZP_05503776.1| modification methylase HemK [Enterococcus faecalis T3] gi|256853869|ref|ZP_05559234.1| hemK protein [Enterococcus faecalis T8] gi|307290430|ref|ZP_07570345.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis TX0411] gi|256684447|gb|EEU24142.1| modification methylase HemK [Enterococcus faecalis T3] gi|256710812|gb|EEU25855.1| hemK protein [Enterococcus faecalis T8] gi|306498623|gb|EFM68125.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis TX0411] gi|315030388|gb|EFT42320.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis TX4000] gi|315150060|gb|EFT94076.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis TX0012] Length = 277 Score = 95.5 bits (236), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 63/212 (29%), Positives = 104/212 (49%), Gaps = 17/212 (8%) Query: 54 ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113 +LG +FY ++ T PRPETE LV+ L + + ++D+GTGTGA+ + Sbjct: 73 LLGQAEFYGHSFIVNEHTLIPRPETEELVERCL-----KANPDTPLTVVDVGTGTGAIAI 127 Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVS 170 +L P ++ + +D+S +AL +AK NA G F + LQ + D+++S Sbjct: 128 SLKLARPNWRVIAIDLSEEALTVAKQNAQALGAGIEFYHGNGLQPVASEKI----DLLIS 183 Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230 NPPYI + VR ++P+ +L +GL+ Y+ + L DG EIG+ Sbjct: 184 NPPYISEQEWHLMDASVRTYEPKTALFAENNGLALYQQLIHESQTMLKADGKIYFEIGFQ 243 Query: 231 QKVDVVRIFES---RKLFLVNAFKDYGGNDRV 259 Q + + + +K + KD GNDR+ Sbjct: 244 QGAALQELLSAAYPQKTIKIE--KDLSGNDRL 273 >gi|225156035|ref|ZP_03724518.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Opitutaceae bacterium TAV2] gi|224803268|gb|EEG21508.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Opitutaceae bacterium TAV2] Length = 338 Score = 95.1 bits (235), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 79/280 (28%), Positives = 109/280 (38%), Gaps = 54/280 (19%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ + GL Q+ + + L + + + + R E + ILG ++ + L Sbjct: 26 DAEWLVGHALGLKRMQLYMQFERPLKESELDLIRPLVRRRGAREPLQHILGTVEWCGLTL 85 Query: 66 TLSSDTFEPRPETELLVDSALAF--------------------SLPRIEKRDVVRILDLG 105 PRPETE LV+ +A S P RILDLG Sbjct: 86 KTDRRALIPRPETEYLVELIIAKLHPSRASISSTASDVGRSAQSAPPPSVAAPSRILDLG 145 Query: 106 TGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS------ 159 TGTGA+ LAL P +D S AL +A+ NA + R ++S+WFS Sbjct: 146 TGTGAIALALATHFPKAAVTALDASDDALALARENAAALALDARVTFVKSNWFSALPPPP 205 Query: 160 ----------------------------SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFD 191 S LFD+IVSNPPY+ EVR D Sbjct: 206 PPAATDTDISSTALDVGRSTLDVGRSAQSAAPLFDLIVSNPPYLTDAEAAAAEPEVRLHD 265 Query: 192 PRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231 PR +L DGL+ RT+ D L GL ++E G Q Sbjct: 266 PRSALVAPDDGLADLRTLIDQARARLVPGGLLALETGPTQ 305 >gi|294777681|ref|ZP_06743132.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacteroides vulgatus PC510] gi|319640267|ref|ZP_07994992.1| protoporphyrinogen oxidase [Bacteroides sp. 3_1_40A] gi|294448749|gb|EFG17298.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacteroides vulgatus PC510] gi|317388042|gb|EFV68896.1| protoporphyrinogen oxidase [Bacteroides sp. 3_1_40A] Length = 278 Score = 95.1 bits (235), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 78/252 (30%), Positives = 116/252 (46%), Gaps = 6/252 (2%) Query: 10 FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69 L +V G+S ++ D+ +R L + +VR K E I I+G +FY + ++ Sbjct: 28 LLTQVFGMSVVELYAGKDTTFSVNERKQLDDILVRLQKLEPIQYIIGTEEFYGLTFEVNK 87 Query: 70 DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129 PRPET LVD + R K VRILD+GTG+G + ++L K + V D+ Sbjct: 88 HVLIPRPETGELVDWII-----REHKYGRVRILDIGTGSGCIAVSLAKNLEEAEVVSWDV 142 Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRD 189 S K L++A+ N NGV + S FDVIVSNPPYI + V + Sbjct: 143 SEKVLQVAERNCRRNGVRVTLEQRDVLLASPAGERFDVIVSNPPYITEKERADMSANVLE 202 Query: 190 FDPRISLDGGIDG-LSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN 248 ++P ++L D L YR IA+ L G EI + V + + + Sbjct: 203 WEPELALFVPDDSPLLFYRKIAELGRDMLVSGGRLYFEINQEYGRETVDMLAGLEYKNIE 262 Query: 249 AFKDYGGNDRVL 260 KD NDR++ Sbjct: 263 LRKDLFQNDRMI 274 >gi|258508167|ref|YP_003170918.1| modification methylase HemK [Lactobacillus rhamnosus GG] gi|257148094|emb|CAR87067.1| Modification methylase HemK protein [Lactobacillus rhamnosus GG] Length = 276 Score = 95.1 bits (235), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 69/252 (27%), Positives = 114/252 (45%), Gaps = 12/252 (4%) Query: 11 LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70 + R S ++ D + D R F + + R E I G F+ ++ Sbjct: 31 MTRADWTPSQLILHRQDPMPDAAWRQFQAD-VARLANFEPAQYITGQAPFFGTMFAVTPA 89 Query: 71 TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130 PR ETE LV E+ + LD+GTG+GA+ L L ++ P ++S Sbjct: 90 VLIPRFETEELVAWVAE------EQTNAQTGLDMGTGSGAIGLTLARQLPQIDMTLSEVS 143 Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDF 190 AL +AK NA V+ F T SD F+ + G FD +V+N PYI + + Sbjct: 144 PSALAVAKHNAAAQKVNVHFVT--SDLFNHLPGRFDFVVTNLPYIAPEETSVMDQSTLRY 201 Query: 191 DPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAF 250 +P+++L GL+ + + +HLN G +E GY+Q+ + ++F + KL A Sbjct: 202 EPKLALFADHHGLALFERFVTELPQHLNPHGAAYLEFGYHQEPALRQLF-AEKLPQAQAT 260 Query: 251 --KDYGGNDRVL 260 +D G+ R++ Sbjct: 261 FRRDMAGHPRMV 272 >gi|297202391|ref|ZP_06919788.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptomyces sviceus ATCC 29083] gi|197710088|gb|EDY54122.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptomyces sviceus ATCC 29083] Length = 281 Score = 95.1 bits (235), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 69/214 (32%), Positives = 104/214 (48%), Gaps = 15/214 (7%) Query: 35 RFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIE 94 R++ T I R + E + I G F + L + F PRPETE S + +++ + Sbjct: 53 RYWET--IARREQREPLQHITGLAYFRYLELQVGPGVFVPRPETE----SVVGWAIDAVR 106 Query: 95 KRDVVR--ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152 DVV I+DL TG+GA+ LAL +E P + V++S +AL + N + R D Sbjct: 107 AMDVVEPCIVDLCTGSGAIALALAQEVPRSRVHAVELSEEALRWTRKNVEGS----RVDL 162 Query: 153 LQS---DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209 Q D F ++G D+++SNPPYI + + E RD+DP ++L G DGL R + Sbjct: 163 RQGNALDAFRDLDGHVDLVISNPPYIPLTEWEYVAPEARDYDPELALFSGEDGLDLIRGL 222 Query: 210 ADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 R L G+ +E Q V IF + Sbjct: 223 ERTAHRLLRPGGVVVIEHADTQGGQVPWIFTEER 256 >gi|315168547|gb|EFU12564.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis TX1341] Length = 277 Score = 95.1 bits (235), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 63/212 (29%), Positives = 104/212 (49%), Gaps = 17/212 (8%) Query: 54 ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113 +LG +FY ++ T PRPETE LV+ L + + ++D+GTGTGA+ + Sbjct: 73 LLGQAEFYGHSFIVNEHTLIPRPETEELVERCL-----KANPDTPLTVVDVGTGTGAIAI 127 Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVS 170 +L P ++ + +D+S +AL +AK NA G F + LQ + D+++S Sbjct: 128 SLKLARPNWRVIAIDLSEEALTVAKQNAQALGAGIEFYHGNGLQPVASEKI----DLLIS 183 Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230 NPPYI + VR ++P+ +L +GL+ Y+ + L DG EIG+ Sbjct: 184 NPPYISEQEWHLMDASVRTYEPKTALFAENNGLALYQQLIHESQTMLKADGKIYFEIGFQ 243 Query: 231 QKVDVVRIFES---RKLFLVNAFKDYGGNDRV 259 Q + + + +K + KD GNDR+ Sbjct: 244 QGAALQELLSAAYPQKTIKIE--KDLSGNDRL 273 >gi|257087540|ref|ZP_05581901.1| modification methylase HemK [Enterococcus faecalis D6] gi|256995570|gb|EEU82872.1| modification methylase HemK [Enterococcus faecalis D6] gi|315025303|gb|EFT37235.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis TX2137] Length = 277 Score = 95.1 bits (235), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 63/212 (29%), Positives = 104/212 (49%), Gaps = 17/212 (8%) Query: 54 ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113 +LG +FY ++ T PRPETE LV+ L + + ++D+GTGTGA+ + Sbjct: 73 LLGQAEFYGHSFIVNEHTLIPRPETEELVERCL-----KANPDTPLTVVDVGTGTGAIAI 127 Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVS 170 +L P ++ + +D+S +AL +AK NA G F + LQ + D+++S Sbjct: 128 SLKLARPNWRVIAIDLSEEALTVAKQNAQALGAGIEFYHGNGLQPVASEKI----DLLIS 183 Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230 NPPYI + VR ++P+ +L +GL+ Y+ + L DG EIG+ Sbjct: 184 NPPYISEQEWHLMDASVRTYEPKTALFAENNGLALYQQLIHESQTMLKADGKIYFEIGFQ 243 Query: 231 QKVDVVRIFES---RKLFLVNAFKDYGGNDRV 259 Q + + + +K + KD GNDR+ Sbjct: 244 QGAALQELLSAVYPQKTIKIE--KDLSGNDRL 273 >gi|227519761|ref|ZP_03949810.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Enterococcus faecalis TX0104] gi|227072849|gb|EEI10812.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Enterococcus faecalis TX0104] Length = 277 Score = 95.1 bits (235), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 63/212 (29%), Positives = 104/212 (49%), Gaps = 17/212 (8%) Query: 54 ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113 +LG +FY ++ T PRPETE LV+ L + + ++D+GTGTGA+ + Sbjct: 73 LLGQAEFYGHSFIVNEHTLIPRPETEELVERCL-----KANPDTPLTVVDVGTGTGAIAI 127 Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVS 170 +L P ++ + +D+S +AL +AK NA G F + LQ + D+++S Sbjct: 128 SLKLARPNWRVIAIDLSEEALTVAKQNAQALGAGIEFYHGNGLQPVTSEKI----DLLIS 183 Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230 NPPYI + VR ++P+ +L +GL+ Y+ + L DG EIG+ Sbjct: 184 NPPYISEQEWHLMDASVRTYEPKTALFAENNGLALYQQLIHESQTMLKADGKIYFEIGFQ 243 Query: 231 QKVDVVRIFES---RKLFLVNAFKDYGGNDRV 259 Q + + + +K + KD GNDR+ Sbjct: 244 QGAALQELLSAAYPQKTIKIE--KDLSGNDRL 273 >gi|256616930|ref|ZP_05473776.1| modification methylase HemK [Enterococcus faecalis ATCC 4200] gi|307276805|ref|ZP_07557916.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis TX2134] gi|256596457|gb|EEU15633.1| modification methylase HemK [Enterococcus faecalis ATCC 4200] gi|306506442|gb|EFM75601.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis TX2134] Length = 277 Score = 95.1 bits (235), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 63/212 (29%), Positives = 105/212 (49%), Gaps = 17/212 (8%) Query: 54 ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113 +LG +FY ++ T PRPETE LV+ L + + ++D+GTGTGA+ + Sbjct: 73 LLGQAEFYGHSFIVNEHTLIPRPETEELVERCL-----KANPDTPLTVVDVGTGTGAIAV 127 Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVS 170 +L P ++ + +D+S +AL +AK NA G F + LQ + D+++S Sbjct: 128 SLKLARPNWRVIAIDLSEEALTVAKQNAQALGAGIEFYHGNGLQPVASEKI----DLLIS 183 Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230 NPPYI + VR ++P+ +L +GL+ Y+ + L DG EIG+ Sbjct: 184 NPPYISEQEWYLMDASVRTYEPKTALFAENNGLALYQQLIHESQTMLKADGKIYFEIGFQ 243 Query: 231 QKVDVVRIFES---RKLFLVNAFKDYGGNDRV 259 Q + ++ + +K + KD GNDR+ Sbjct: 244 QGAALQKLLSAAYPQKTIKIE--KDLSGNDRL 273 >gi|156398472|ref|XP_001638212.1| predicted protein [Nematostella vectensis] gi|156225331|gb|EDO46149.1| predicted protein [Nematostella vectensis] Length = 214 Score = 95.1 bits (235), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 69/210 (32%), Positives = 104/210 (49%), Gaps = 10/210 (4%) Query: 49 ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108 E I I+G DF + L + + PRPETE LV+ + K LD+G+G+ Sbjct: 7 EPIQYIVGDWDFRFLTLQMQAPVLIPRPETEQLVEL-----INNHLKSSTFAFLDVGSGS 61 Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW--FSSVEGLFD 166 GA+CL+LL E+ GV +D+S A+++ + NA G++ R + + FD Sbjct: 62 GAICLSLLSENEKASGVAIDVSPVAVKLTRLNAHRCGMNCRLELYHCPIGELNMTLKKFD 121 Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE 226 +IVSNPPYI + L EV ++ R +L GG DG+ R I + LN++G +E Sbjct: 122 MIVSNPPYIPEHDMTLLQPEVASYEDRQALCGGKDGMDVIRQILAAAPQLLNRNGSIWLE 181 Query: 227 IGYNQKVDVVRIFESR---KLFLVNAFKDY 253 V ESR L L + +KD+ Sbjct: 182 TDLTHPPLVRDWLESRGHLGLTLHSVYKDF 211 >gi|259649484|dbj|BAI41646.1| methylase [Lactobacillus rhamnosus GG] Length = 261 Score = 95.1 bits (235), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 69/252 (27%), Positives = 114/252 (45%), Gaps = 12/252 (4%) Query: 11 LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70 + R S ++ D + D R F + + R E I G F+ ++ Sbjct: 16 MTRADWTPSQLILHRQDPMPDAAWRQFQAD-VARLANFEPAQYITGQAPFFGTMFAVTPA 74 Query: 71 TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130 PR ETE LV E+ + LD+GTG+GA+ L L ++ P ++S Sbjct: 75 VLIPRFETEELVAWVAE------EQTNAQTGLDMGTGSGAIGLTLARQLPQIDMTLSEVS 128 Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDF 190 AL +AK NA V+ F T SD F+ + G FD +V+N PYI + + Sbjct: 129 PSALAVAKHNAAAQKVNVHFVT--SDLFNHLPGRFDFVVTNLPYIAPEETSVMDQSTLRY 186 Query: 191 DPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAF 250 +P+++L GL+ + + +HLN G +E GY+Q+ + ++F + KL A Sbjct: 187 EPKLALFADHHGLALFERFVTELPQHLNPHGAAYLEFGYHQEPALRQLF-AEKLPQAQAT 245 Query: 251 --KDYGGNDRVL 260 +D G+ R++ Sbjct: 246 FRRDMAGHPRMV 257 >gi|254387522|ref|ZP_05002761.1| methylase [Streptomyces clavuligerus ATCC 27064] gi|294815091|ref|ZP_06773734.1| Methyltransferase [Streptomyces clavuligerus ATCC 27064] gi|326443453|ref|ZP_08218187.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Streptomyces clavuligerus ATCC 27064] gi|197701248|gb|EDY47060.1| methylase [Streptomyces clavuligerus ATCC 27064] gi|294327690|gb|EFG09333.1| Methyltransferase [Streptomyces clavuligerus ATCC 27064] Length = 281 Score = 95.1 bits (235), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 66/202 (32%), Positives = 98/202 (48%), Gaps = 7/202 (3%) Query: 40 NAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV 99 A+ R E + I G F + L + F PRPETE S + +++ + DVV Sbjct: 56 EAVARREAREPLQHITGRAFFRYLELQVGPGVFVPRPETE----SVVGWAIDAVRAMDVV 111 Query: 100 R--ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 I+DL TG+GA+ LA+ +E P + V++S AL+ A+ NA + V+ + Sbjct: 112 EPLIVDLCTGSGAIALAMAQEVPRSRVHAVELSENALDWARKNAEGSRVTVHHGNALTA- 170 Query: 158 FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217 ++G D+++SNPPYI + + E RD DP ++L G DGL R I R L Sbjct: 171 LPELDGQVDLVISNPPYIPLTEWEYVAPEARDHDPEMALFSGEDGLDTIRGIERTAHRLL 230 Query: 218 NKDGLCSVEIGYNQKVDVVRIF 239 GL +E Q V IF Sbjct: 231 RPGGLVVIEHADTQGGQVPWIF 252 >gi|290957364|ref|YP_003488546.1| methylase [Streptomyces scabiei 87.22] gi|260646890|emb|CBG69987.1| putative methylase [Streptomyces scabiei 87.22] Length = 281 Score = 95.1 bits (235), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 68/207 (32%), Positives = 99/207 (47%), Gaps = 13/207 (6%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR- 100 I R + E + I G F + L + F PRPETE S + +++ + DVV Sbjct: 58 IARREQREPLQHITGRAYFRYLELQVGPGVFVPRPETE----SVVGWAIDAVRAMDVVEP 113 Query: 101 -ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS---D 156 I+DL TG+GA+ LAL +E P + V++S AL + N + R D Q D Sbjct: 114 LIVDLCTGSGAIALALAQEVPRSRVHAVELSEDALTWTRKNMAGS----RVDLRQGNALD 169 Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216 F ++G D++VSNPPYI + + E RD+DP ++L G DGL R + R Sbjct: 170 AFRDLDGQVDLVVSNPPYIPLTEWEYVAPEARDYDPELALFSGEDGLELIRGLERTAHRL 229 Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRK 243 L G+ +E Q V IF + Sbjct: 230 LRPGGVVVIEHADTQGGQVPWIFTEER 256 >gi|55980410|ref|YP_143707.1| HemK family methyltransferase [Thermus thermophilus HB8] gi|55771823|dbj|BAD70264.1| methyltransferase, HemK family [Thermus thermophilus HB8] Length = 500 Score = 95.1 bits (235), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 68/219 (31%), Positives = 105/219 (47%), Gaps = 9/219 (4%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101 + R L+ + ++G +F+ + L + PRPETE LV+ AL LP RI Sbjct: 67 LKRRLQGYPLQYLVGEVEFFGLPLRVEEGVLIPRPETEGLVELALGLPLP-----PAPRI 121 Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 LD+GTGTGA+ LAL + P + ++ KAL +A+ NA G+S F L + + Sbjct: 122 LDVGTGTGAIALALKRALPEAEVYATEVDPKALALARENAERLGLSVAF--LPAPLTGGL 179 Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221 L D++VSNPPY+ + E+ ++ ++L G +GLS R +A+ R L G Sbjct: 180 RDL-DLVVSNPPYLPEAYREKAPREL-GYESPLALYAGPEGLSVARPLAEEARRSLKPGG 237 Query: 222 LCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 +E+ + R + V D G DR L Sbjct: 238 YLLLELAPENVHLLARELREKGWKEVAVLPDLAGRDRYL 276 >gi|189218442|ref|YP_001939083.1| methylase of polypeptide chain release factors [Methylacidiphilum infernorum V4] gi|189185300|gb|ACD82485.1| Methylase of polypeptide chain release factors [Methylacidiphilum infernorum V4] Length = 279 Score = 95.1 bits (235), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 75/227 (33%), Positives = 113/227 (49%), Gaps = 15/227 (6%) Query: 37 FLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR 96 L I R E + ILG+ FY ++ +S PRPETE +V++A+ L RI Sbjct: 57 LLWKRIERRATGEPLDYILGFSPFYGGKILVSPAVLIPRPETEYVVEAAINL-LSRIPGP 115 Query: 97 DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA--VTNGVSERFDTLQ 154 ILD+GTG+GA+ + L K P G DIS +ALE+A+ N + N + D L Sbjct: 116 ----ILDVGTGSGAIVVTLAKLFPDRSFYGSDISEEALEVARKNGKDLANLYFYKDDLLN 171 Query: 155 SDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214 F++IV+N PYI S + L E++ F+P I+LDGG +GL I + Sbjct: 172 DPPLD----FFELIVANLPYIPSETLPRLSAEIQ-FEPAIALDGGKEGL---ELIKKFIG 223 Query: 215 RHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 + N+ C +EIG Q V + + ++ KD +RV++ Sbjct: 224 QAKNRCRYCILEIGDGQFSKVSQFLHEQGFSIIEVKKDLSQMERVIV 270 >gi|255038065|ref|YP_003088686.1| modification methylase, HemK family [Dyadobacter fermentans DSM 18053] gi|254950821|gb|ACT95521.1| modification methylase, HemK family [Dyadobacter fermentans DSM 18053] Length = 286 Score = 95.1 bits (235), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 72/228 (31%), Positives = 107/228 (46%), Gaps = 16/228 (7%) Query: 40 NAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV 99 N I R +E + I+G +F + +SS PRPETE LV + E + Sbjct: 59 NIIKRLNNNEPVQHIIGSTEFCGLEFRVSSAVLIPRPETEELVQMV---TRDYAEPDKNI 115 Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA---VTNGVSERFDTLQSD 156 ILD+GTG+G + + L + P D+S +ALE+A+ NA + + + D L Sbjct: 116 SILDIGTGSGCIAIVLARFLPHVSVHAWDVSDEALEVARENARQLIADVTFAKQDMLNVA 175 Query: 157 WFSSVEG---LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL---DGGIDGLSHYRTIA 210 + + G FD +VSNPPY+ + + V F+P +L D D L Y+ IA Sbjct: 176 F--PLPGNIVQFDCLVSNPPYVTYSEAESMRPNVLRFEPHEALFVEDN--DPLLFYKAIA 231 Query: 211 DGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258 D + HL G C VEI + + ++FE R V +D G DR Sbjct: 232 DFGTHHLKHGGKCYVEINEHFGAETKQVFEERNYIKVEILRDINGKDR 279 >gi|29829453|ref|NP_824087.1| methyltransferase [Streptomyces avermitilis MA-4680] gi|29606561|dbj|BAC70622.1| putative modification methyltransferase [Streptomyces avermitilis MA-4680] Length = 293 Score = 95.1 bits (235), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 75/241 (31%), Positives = 111/241 (46%), Gaps = 13/241 (5%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ V G+ Q+ + D+ D R I R E + I G F + L Sbjct: 38 DAEELAAFVHGVKRGQLHLVKDADFDAR----YWEMIARREAREPLQHITGLAYFRYLEL 93 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR--ILDLGTGTGAVCLALLKESPFFK 123 + F PRPETE S + +++ + DVV I+DL TG+GA+ LAL +E P + Sbjct: 94 QVGPGVFVPRPETE----SVVGWAIDAVRAMDVVEPLIVDLCTGSGAIALALAQEVPRSR 149 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERF-DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182 V++S AL + N + V R D L++ F ++G D+++SNPPYI + Sbjct: 150 VHAVELSEDALRWTRKNVEGSRVDLRQGDALEA--FPDLDGQVDLVISNPPYIPLTEWEY 207 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 + E RD DP ++L G DGL R I R L G+ +E Q V IF Sbjct: 208 VAPEARDHDPELALFSGEDGLDLIRGIERTAHRLLRPGGVVVIEHADTQGGQVPWIFTEE 267 Query: 243 K 243 + Sbjct: 268 R 268 >gi|302549270|ref|ZP_07301612.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Streptomyces viridochromogenes DSM 40736] gi|302466888|gb|EFL29981.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Streptomyces viridochromogenes DSM 40736] Length = 270 Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 71/211 (33%), Positives = 100/211 (47%), Gaps = 15/211 (7%) Query: 39 TNAIV-RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97 T A+V R + + ++GW +F +R+T++ F PR TE LV+ ALA R+ + Sbjct: 50 TAAMVERRVAGLPLELVVGWAEFRGLRVTVAPGVFVPRRRTEFLVEQALA----RVPRAT 105 Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 VV LDL G+GAV AL + DI A+ A+SN G Q D Sbjct: 106 VV--LDLCCGSGAVGAALASALGRVELHAADIDPAAVRCARSNVAAVG----GHVHQGDL 159 Query: 158 FSSVEGLF----DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213 F ++ G D++ +N PY+ S + L LE RD +P ++LDGG DGL R +A Sbjct: 160 FDALPGALRGRVDILAANVPYVPSDEIGLLPLEARDHEPLVALDGGADGLDVLRRVAAEA 219 Query: 214 SRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 R L G VE Q + FE L Sbjct: 220 PRWLAPGGCVLVETSRLQAPAALTAFEGNGL 250 >gi|315186592|gb|EFU20351.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Spirochaeta thermophila DSM 6578] Length = 282 Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 79/270 (29%), Positives = 120/270 (44%), Gaps = 26/270 (9%) Query: 6 DSHSFLCRVTGLSSHQVIVD-PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 D+ L +GL ++ P+ V + +R F + + R L E + I G ++FY + Sbjct: 26 DALLILSHASGLPKEALLASYPEPVPPETRRTF-ESLLARRLAGEPVSYIRGLKEFYGLT 84 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRD--VVRILDLGTGTGAVCLALLKESP-F 121 + PRP+TE+LVD+AL +RD + I D TGTG + +A+L +P Sbjct: 85 FHVDRRVLVPRPDTEVLVDAALTLI-----RRDPAITHIHDACTGTGCILIAILTHTPRP 139 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTL----QSDWFSSVEGLFDVIVSNPPYI-- 175 D+S +AL++ + NA S T+ +SD SSV G F +I +NPPY+ Sbjct: 140 LTASASDVSEEALDVFRENA-----SRLLGTVPPHHRSDLLSSVPGRFHLITANPPYLTE 194 Query: 176 -ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234 E ++ G +P ++L G DGLSH R + HL G E Q Sbjct: 195 EEVAVMKASGWP----EPALALASGPDGLSHIRRLIPQALDHLVPGGYLICEHHDAQADA 250 Query: 235 VVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 V ++ V D G R L R Sbjct: 251 VAELYREAGYTHVRHLPDLAGRRRATLARR 280 >gi|323219316|gb|EGA03805.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] Length = 199 Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 70/174 (40%), Positives = 97/174 (55%), Gaps = 7/174 (4%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 RD+ L VTG ++ ++ L D Q+ L + + R + E I + G R+F+++ Sbjct: 22 RDAEILLEYVTGKGRTYIMAFGETPLTDVQQQQLADLLQRRKQGEPIAYLTGLREFWSLP 81 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L +S T PRP+TE LV+ ALA LP RILDLGTGTGA+ LAL E P + Sbjct: 82 LFVSPATLIPRPDTECLVEQALA-RLP----VKTCRILDLGTGTGAIALALACERPDCEV 136 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIES 177 VD A+ +A NA + LQS WFS++ G FD+IVSNPPYI++ Sbjct: 137 TAVDRMPDAVALAIRNAEHLAI-RNVRILQSCWFSALSGQQFDMIVSNPPYIDA 189 >gi|326800778|ref|YP_004318597.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Sphingobacterium sp. 21] gi|326551542|gb|ADZ79927.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Sphingobacterium sp. 21] Length = 286 Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 77/251 (30%), Positives = 116/251 (46%), Gaps = 10/251 (3%) Query: 16 GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75 G S +++ L+D Q L +A R E + I+G F + L ++ PR Sbjct: 36 GYSRRDLLLHKSMSLNDEQLDQLEDAASRISAGEPVQYIIGHTPFMGLSLHVNQHVLIPR 95 Query: 76 PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135 PETE LVD L ++ +++D+GTG+G + +A+ K + +D+S +AL Sbjct: 96 PETEELVD--LIIQDLKLSNSSESKLIDIGTGSGCIPIAIKKYVNQAQVYALDVSVEALA 153 Query: 136 IAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDP 192 +AK NA N F D L+ D + E FDVIVSNPPYI + + V F+P Sbjct: 154 VAKQNAADNQCPVHFMLADILEWDIIFAEEVKFDVIVSNPPYITNSEQKGMHPNVLQFEP 213 Query: 193 RISL---DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249 ++L D L Y TIA HL K G EI N +V + + + Sbjct: 214 HLALFVEDQA--PLLFYETIAAFALAHLEKGGKLYFEINRNFGQEVKDLLTKKGFKNILL 271 Query: 250 FKDYGGNDRVL 260 +D G DR++ Sbjct: 272 KQDIHGADRMV 282 >gi|238022355|ref|ZP_04602781.1| hypothetical protein GCWU000324_02262 [Kingella oralis ATCC 51147] gi|237866969|gb|EEP68011.1| hypothetical protein GCWU000324_02262 [Kingella oralis ATCC 51147] Length = 319 Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 62/175 (35%), Positives = 92/175 (52%), Gaps = 6/175 (3%) Query: 91 PRIEKRDVV-RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 P IE ++V R LDL TG+G + + + P + VDIS ALE+A N G+ ER Sbjct: 143 PWIEYPELVHRALDLCTGSGCLAIQIADHYPAAQVDAVDISLDALEVAAVNVEDYGLQER 202 Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209 + + +D F +EG +D+IVSNPPY+++ V L E +P ++L G DGL R I Sbjct: 203 VNLIHTDLFEGLEGTYDLIVSNPPYVDAESVAALPNEYL-HEPELALGSGEDGLDATREI 261 Query: 210 ADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 ++ LN G+ VEIG+N+ E ++L + GG+ V L R Sbjct: 262 LLQAAKFLNPKGVLLVEIGHNRDALEAAYPELPFMWLETS----GGDGFVFLLTR 312 >gi|257453785|ref|ZP_05619063.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Enhydrobacter aerosaccus SK60] gi|257448712|gb|EEV23677.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Enhydrobacter aerosaccus SK60] Length = 284 Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 69/215 (32%), Positives = 102/215 (47%), Gaps = 13/215 (6%) Query: 54 ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113 ++G + F+ ++ T PRP+TE L+++ L + K+ + ILDLGTG+G + + Sbjct: 72 VVGKQSFWQHEFLVNQHTLIPRPDTERLIEAVLNHHKNSLSKQ--MNILDLGTGSGCIAI 129 Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW---FSSVEG----LFD 166 L +E VD S +AL +A NA GVS + W F + G FD Sbjct: 130 TLAEEFKNSSVSAVDKSPQALSVATQNAKRIGVS-NIAFFEGSWYEPFMTAHGDESNKFD 188 Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE 226 +IVSNPPYI+ GL I+ + G+ + H I + L GL ++E Sbjct: 189 IIVSNPPYIDPNDPHLAGLTDEPISALIADNKGMADICH---IVKTAPQFLQPHGLLAIE 245 Query: 227 IGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 G+ Q V +F S V KDYG N+RV L Sbjct: 246 HGHEQGEQVRDVFLSNGFDEVITVKDYGNNERVTL 280 >gi|297622632|ref|YP_003704066.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Truepera radiovictrix DSM 17093] gi|297163812|gb|ADI13523.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Truepera radiovictrix DSM 17093] Length = 280 Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 77/235 (32%), Positives = 106/235 (45%), Gaps = 12/235 (5%) Query: 34 QRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRI 93 QR L + R E + ILG FY + L ++ PRPETE LV+ ALA + Sbjct: 54 QRRRLEAWVRRREAREPLQHILGVAPFYGLTLRVTPQVLVPRPETERLVELALAH----L 109 Query: 94 EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF--- 150 R +LD+GTG+GAV LAL E P + D+S AL +A+ NA G+ RF Sbjct: 110 RGRARPHVLDVGTGSGAVALALQAERPDAVVLASDLSGAALAVARENARRLGLPVRFRRA 169 Query: 151 DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210 D L + +++VSNPPY+ + + EV DP +L G DGL+ +R + Sbjct: 170 DLLADPAVRAFARRAELVVSNPPYLPEGDREAVSPEV-QADPATALYAGPDGLAVFRRLE 228 Query: 211 DGVSRHLNKDGLCSVEIGYNQKVDVVR-IFESRKLFLVNAFKDYGGNDRVLLFCR 264 L VE+ +V R + ESR D G R L R Sbjct: 229 REAFSALQPGAALFVELDAR---NVARALAESRGWARGAVHDDLVGRPRFLQLVR 280 >gi|256961204|ref|ZP_05565375.1| modification methylase HemK [Enterococcus faecalis Merz96] gi|293384153|ref|ZP_06630047.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis R712] gi|293386967|ref|ZP_06631536.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis S613] gi|312907896|ref|ZP_07766879.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis DAPTO 512] gi|312978575|ref|ZP_07790313.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Enterococcus faecalis DAPTO 516] gi|256951700|gb|EEU68332.1| modification methylase HemK [Enterococcus faecalis Merz96] gi|291078633|gb|EFE15997.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis R712] gi|291083637|gb|EFE20600.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis S613] gi|310625987|gb|EFQ09270.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis DAPTO 512] gi|311288724|gb|EFQ67280.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Enterococcus faecalis DAPTO 516] Length = 277 Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 63/212 (29%), Positives = 104/212 (49%), Gaps = 17/212 (8%) Query: 54 ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113 +LG +FY ++ T PRPETE LV+ L + + ++D+GTGTGA+ + Sbjct: 73 LLGQAEFYGHSFIVNEHTLIPRPETEELVERCL-----KANPDTPLTVVDVGTGTGAIAI 127 Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVS 170 +L P ++ + +D+S +AL +AK NA G F + LQ + D+++S Sbjct: 128 SLKLARPNWRVIAIDLSEEALTVAKQNAQVLGADIEFYHGNGLQPVASEKI----DLLIS 183 Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230 NPPYI + VR ++P+ +L +GL+ Y+ + L DG EIG+ Sbjct: 184 NPPYISEQEWHLMDASVRTYEPKTALFAENNGLALYQQLIHESQTMLKADGKIYFEIGFQ 243 Query: 231 QKVDVVRIFES---RKLFLVNAFKDYGGNDRV 259 Q + + + +K + KD GNDR+ Sbjct: 244 QGAALQELLSAAYPQKTIKIE--KDLSGNDRL 273 >gi|229819783|ref|YP_002881309.1| modification methylase, HemK family [Beutenbergia cavernae DSM 12333] gi|229565696|gb|ACQ79547.1| modification methylase, HemK family [Beutenbergia cavernae DSM 12333] Length = 296 Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 75/249 (30%), Positives = 118/249 (47%), Gaps = 12/249 (4%) Query: 6 DSHSFLCRVTGLSSHQV--IVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63 D+ + L G++ +V +V D+ L + +R + R E + ILG F ++ Sbjct: 30 DAETLLASALGVTRAEVRRLVVLDADLPEGRRADFARLVDRRAAREPLQHILGAAPFRHL 89 Query: 64 RLTLSSDTFEPRPETELLVDSAL--AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 L + F PRPETE++ A+ A L + R +V +DL G G + LA+ E P Sbjct: 90 ELAVGPGVFVPRPETEVVAQVAIDEAERLAVDDARPLV--VDLCCGAGGIALAVDTEVPA 147 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVS----ERFDTLQSDWFSSVEGLFDVIVSNPPYIES 177 + V VD++ +A+ + + N G E D S+ + ++G DV+VSNPPYI Sbjct: 148 SRVVAVDLAPEAVALTRRNDAAVGTRTMRIEHGDVRDSELLADLDGTVDVVVSNPPYIPP 207 Query: 178 VIVDCLGLEVRDFDPRISL-DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236 + EVRD DP ++L GG+DGL R + +R L GL +E Q V Sbjct: 208 -DAEPTEPEVRDHDPDLALYGGGVDGLDVPRAVVLASTRLLRAGGLFVMEHAEVQAAAVR 266 Query: 237 RIFESRKLF 245 + + F Sbjct: 267 EVVTASGAF 275 >gi|293371695|ref|ZP_06618106.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacteroides ovatus SD CMC 3f] gi|292633392|gb|EFF51962.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacteroides ovatus SD CMC 3f] Length = 278 Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 84/259 (32%), Positives = 121/259 (46%), Gaps = 16/259 (6%) Query: 12 CRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDT 71 C + GL + + + D +L + ++ L N I R K+E I I G +F ++S Sbjct: 30 CDMLGLDALDIYMGKDIILSECKQRELENIIFRLQKNEPIQYIRGVAEFCGRNFKVASGV 89 Query: 72 FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131 PRPET LV+ + E + R+LD+GTG+G + ++L K+ P + DIS Sbjct: 90 LIPRPETAELVELIVE------ESPNARRLLDIGTGSGCIAISLDKKLPDAEVEAWDISE 143 Query: 132 KALEIAKSN--AVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLE 186 +AL IA+ N A+ GV RF D L DW FDVIVSNPPY+ + + Sbjct: 144 EALAIARKNNDALEAGV--RFLQRDVLSDDWEKVPS--FDVIVSNPPYVTETEKNEMDAN 199 Query: 187 VRDFDPRISL-DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245 V D++P ++L D L Y IA S L G EI + I E + Sbjct: 200 VLDWEPGLALFVPDEDPLRFYNRIACLGSDLLLPGGKLYFEINQAYGRETAHILEMNQYR 259 Query: 246 LVNAFKDYGGNDRVLLFCR 264 V KD G DR++ R Sbjct: 260 DVRVIKDIFGKDRIVTANR 278 >gi|257081919|ref|ZP_05576280.1| modification methylase HemK [Enterococcus faecalis E1Sol] gi|256989949|gb|EEU77251.1| modification methylase HemK [Enterococcus faecalis E1Sol] Length = 277 Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 63/212 (29%), Positives = 104/212 (49%), Gaps = 17/212 (8%) Query: 54 ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113 +LG +FY ++ T PRPETE LV+ L + + ++D+GTGTGA+ + Sbjct: 73 LLGQAEFYGHSFIVNEHTLIPRPETEELVERCL-----KANPDTPLTVVDVGTGTGAIAI 127 Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVS 170 +L P ++ + +D+S +AL +AK NA G F + LQ + D+++S Sbjct: 128 SLKLARPNWRVIAIDLSEEALTVAKQNAKVLGADIEFYHGNGLQPVASEKI----DLLIS 183 Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230 NPPYI + VR ++P+ +L +GL+ Y+ + L DG EIG+ Sbjct: 184 NPPYISEQEWHLMDASVRTYEPKTALFAENNGLALYQQLIHESQTMLKADGKIYFEIGFQ 243 Query: 231 QKVDVVRIFES---RKLFLVNAFKDYGGNDRV 259 Q + + + +K + KD GNDR+ Sbjct: 244 QGAALQELLSAAYPQKTIKIE--KDLSGNDRL 273 >gi|295113545|emb|CBL32182.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Enterococcus sp. 7L76] gi|315161811|gb|EFU05828.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis TX0645] Length = 277 Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 63/212 (29%), Positives = 104/212 (49%), Gaps = 17/212 (8%) Query: 54 ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113 +LG +FY ++ T PRPETE LV+ L + + ++D+GTGTGA+ + Sbjct: 73 LLGQAEFYGHSFIVNEHTLIPRPETEELVERCL-----KANPDTPLTVVDVGTGTGAIAI 127 Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVS 170 +L P ++ + +D+S +AL +AK NA G F + LQ + D+++S Sbjct: 128 SLKLARPNWRVIAIDLSEEALTVAKQNAQALGAGIEFYHGNGLQPVASEKI----DLLIS 183 Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230 NPPYI + VR ++P+ +L +GL+ Y+ + L DG EIG+ Sbjct: 184 NPPYISEQEWHLMDASVRMYEPKTALFAENNGLALYQQLIHESQTMLKADGKIYFEIGFQ 243 Query: 231 QKVDVVRIFES---RKLFLVNAFKDYGGNDRV 259 Q + + + +K + KD GNDR+ Sbjct: 244 QGAALQELLSAAYPQKTIKIE--KDLSGNDRL 273 >gi|209522892|ref|ZP_03271449.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Arthrospira maxima CS-328] gi|209496479|gb|EDZ96777.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Arthrospira maxima CS-328] Length = 299 Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 68/209 (32%), Positives = 98/209 (46%), Gaps = 11/209 (5%) Query: 54 ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113 ++ WR+F L +S PRPETEL++D A + P + V D+GTG+GA+ L Sbjct: 91 VVHWRNF---TLKVSPAVLIPRPETELIIDIAY-HAAPSAGSGNWV---DMGTGSGAIAL 143 Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS---SVEGLFDVIVS 170 L P VD S AL IA NA + G R Q W+ S++G +V+ Sbjct: 144 GLASVFPEAMIHAVDCSWSALAIALENAQSLGYQNRVKFYQGSWWGPLHSLKGKVSGMVA 203 Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230 NPPYI S + L EV ++P ++LDGG GL + + L G+ +E+ Sbjct: 204 NPPYIPSQELPNLQPEVILYEPPLALDGGESGLDSIHHLVQTAPQFLQPGGIWIIEMMAG 263 Query: 231 QKVDVVRIFESRKLFL-VNAFKDYGGNDR 258 Q V + ES + + D G DR Sbjct: 264 QGEAVTSMLESAGCYRDLKILPDLAGIDR 292 >gi|332669393|ref|YP_004452401.1| modification methylase, HemK family [Cellulomonas fimi ATCC 484] gi|332338431|gb|AEE45014.1| modification methylase, HemK family [Cellulomonas fimi ATCC 484] Length = 289 Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 67/201 (33%), Positives = 101/201 (50%), Gaps = 7/201 (3%) Query: 31 DDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSL 90 DD R L +VR + E + ++LGW +F +R+ ++ F PR TE+LV A+A + Sbjct: 58 DDPDR--LETMVVRRVAGEPLEQVLGWAEFCGLRVAVAPTVFVPRRRTEVLVREAVALA- 114 Query: 91 PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150 R V ++DL GTGAV LA++ V VD+ A+++A+ N G Sbjct: 115 ---PARGAV-VVDLCCGTGAVGLAVVSSLVDAVLVAVDVDPAAVQVARRNLDPVGGVALL 170 Query: 151 DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210 + + S +EG DV+ +N PY+ + V + E RD + R++LDGG DGL R +A Sbjct: 171 GDVDAPLPSHLEGRVDVLTANAPYVPTDEVRLMPPEARDHEARVALDGGPDGLDVQRRVA 230 Query: 211 DGVSRHLNKDGLCSVEIGYNQ 231 R L G VE Q Sbjct: 231 AAAPRWLRPGGHLLVETSGRQ 251 >gi|254382316|ref|ZP_04997676.1| methyltransferase [Streptomyces sp. Mg1] gi|194341221|gb|EDX22187.1| methyltransferase [Streptomyces sp. Mg1] Length = 281 Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 66/207 (31%), Positives = 101/207 (48%), Gaps = 9/207 (4%) Query: 40 NAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV 99 A+ R E + I G F + L + F PRPETE +VD +++ + DVV Sbjct: 56 EAVARREAREPLQHITGRAFFRYLELQVGPGVFVPRPETESVVD----WAIHAVRAMDVV 111 Query: 100 R--ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSD 156 I+DL +G+GA+ LA+ +E P + V++S AL + NA + V+ + D L + Sbjct: 112 EPMIVDLCSGSGAIALAMAQEVPRSRVHAVELSEDALRWTRKNAEGSRVTVHQGDALSA- 170 Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216 ++G D+++SNPPYI + + E RD DP ++L G DGL R I R Sbjct: 171 -LPELDGQVDLVISNPPYIPLTEWEYVAPEARDHDPEMALFSGEDGLDTIRGIERTAHRL 229 Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRK 243 L G+ +E Q V IF + Sbjct: 230 LRPGGIVVIEHADTQGGQVPWIFAEER 256 >gi|21223721|ref|NP_629500.1| methylase [Streptomyces coelicolor A3(2)] gi|256785186|ref|ZP_05523617.1| methylase [Streptomyces lividans TK24] gi|289769079|ref|ZP_06528457.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptomyces lividans TK24] gi|8568783|emb|CAB94532.1| putative methylase [Streptomyces coelicolor A3(2)] gi|289699278|gb|EFD66707.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptomyces lividans TK24] Length = 281 Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 74/243 (30%), Positives = 110/243 (45%), Gaps = 17/243 (6%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ + G+ ++ PD+ D R + R E + I G F + L Sbjct: 26 DAEELAAYLHGVKRGELHTVPDADFDAR----YWEVVARREAREPLQHITGRAYFRYLEL 81 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR--ILDLGTGTGAVCLALLKESPFFK 123 + F PRPETE S + +++ + DVV I+DL TG+GA+ LAL +E P + Sbjct: 82 QVGPGVFVPRPETE----SVVGWAIDAVRAMDVVEPCIVDLCTGSGAIALALAQEVPRSR 137 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW---FSSVEGLFDVIVSNPPYIESVIV 180 V++S AL+ + N + R D Q D F ++G D++VSNPPYI Sbjct: 138 VHAVELSEDALKWTRRNMEGS----RVDLRQGDALTAFPDLDGQVDLVVSNPPYIPLTEW 193 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 + + E RD DP ++L G DGL R + R L G+ VE Q V IF Sbjct: 194 EYVAPEARDHDPELALFSGEDGLDLIRGLERTAHRLLRPGGVVVVEHADTQGGQVPWIFT 253 Query: 241 SRK 243 + Sbjct: 254 EER 256 >gi|266618886|ref|ZP_06111824.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Clostridium botulinum Bf] gi|263528592|gb|EEZ28359.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Clostridium botulinum Bf] Length = 283 Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 72/258 (27%), Positives = 118/258 (45%), Gaps = 7/258 (2%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L ++ ++ +PD + D ++ I I ILG +F + Sbjct: 25 DTQLLLGKILKKDRLFILTNPDYHIKDEEKEKYFQLIELRKNKMPIKYILGTTEFMGLDF 84 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 + PRP+TE+LV++ L I+ ++ +I D+ G+G + + + + + Sbjct: 85 NIKKGVLIPRPDTEILVETVLE----EIKNKNYKQICDVCCGSGIIGITIGYTLNNTEII 140 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIVDC 182 DI K N + + + +R L+SD + + FD+IVSNPPYI I++ Sbjct: 141 CYDIEDIPYNTTKENILKHNLQDRIKVLKSDLLTEAIKEKRKFDLIVSNPPYIRENIIET 200 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 L +V+ ++P +L GG DGL Y I LN G + EIGY+QK+ V I Sbjct: 201 LMDDVKKYEPFEALCGGKDGLFFYEGIIKQSLEVLNDGGTIAFEIGYDQKIQVSHILNEY 260 Query: 243 KLFLVNAFKDYGGNDRVL 260 V KD G DRV+ Sbjct: 261 GFKDVLCIKDLAGKDRVI 278 >gi|282882112|ref|ZP_06290753.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Peptoniphilus lacrimalis 315-B] gi|281298142|gb|EFA90597.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Peptoniphilus lacrimalis 315-B] Length = 276 Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 69/233 (29%), Positives = 113/233 (48%), Gaps = 21/233 (9%) Query: 32 DRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLP 91 D ++FF + +S + + IL F + + ++ PR ETE+ V+ Sbjct: 53 DEEKFFQILKMRQS--GQPLQYILKETYFMDKKFKINRGVLIPRKETEISVEVITEV--- 107 Query: 92 RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI---AKSNAVTN--GV 146 ++K L++G G+G V + + + +I+C L+I A N TN + Sbjct: 108 -VKKNKCKSFLEIGCGSGIVTIMV--------NLLTNINCSCLDISDLAIENTKTNIKNL 158 Query: 147 SERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206 + +S+ F +V G FD+I SNPPYI++ + L EV++F+P +LDGG GL Y Sbjct: 159 GAKVQVFKSNLFENVTGKFDIIYSNPPYIKTGEIKNLQDEVKNFEPISALDGGESGLEFY 218 Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRV 259 + I + +LN +G EIGY+QK + + K F + KD G RV Sbjct: 219 KKIIKQSTNYLNDNGFLIFEIGYDQKDSIENLMS--KDFNIYFIKDLQGYYRV 269 >gi|265753007|ref|ZP_06088576.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacteroides sp. 3_1_33FAA] gi|263236193|gb|EEZ21688.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacteroides sp. 3_1_33FAA] Length = 278 Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 77/252 (30%), Positives = 116/252 (46%), Gaps = 6/252 (2%) Query: 10 FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69 L +V G+S ++ D+ ++ L + +VR K E I I+G +FY + ++ Sbjct: 28 LLTQVFGMSVVELYAGKDTTFSVNEQKRLDDILVRLQKLEPIQYIIGTEEFYGLTFEVNK 87 Query: 70 DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129 PRPET LVD + R K V+ILD+GTG+G + ++L K + V D+ Sbjct: 88 HVLIPRPETGELVDWII-----REHKYGWVKILDIGTGSGCIAVSLTKNLEEAEVVSWDV 142 Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRD 189 S KAL++A+ N NGV + S FDVIVSNPPYI + V + Sbjct: 143 SEKALQVAERNCRRNGVRVTLEQRDVLLASPAGEQFDVIVSNPPYITEKEKANMSANVLE 202 Query: 190 FDPRISLDGGIDG-LSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN 248 ++P ++L D L YR IA+ L G EI + V + + Sbjct: 203 WEPELALFVPDDSPLLFYRKIAELGRDMLVSGGRLYFEINQEYGRETVDMLAGLGYKNIE 262 Query: 249 AFKDYGGNDRVL 260 KD NDR++ Sbjct: 263 LRKDLFQNDRMI 274 >gi|294501880|ref|YP_003565580.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacillus megaterium QM B1551] gi|294351817|gb|ADE72146.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacillus megaterium QM B1551] Length = 283 Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 70/220 (31%), Positives = 107/220 (48%), Gaps = 19/220 (8%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR---DVVRILDLGTG 107 + ++G +FY ++ PRPETE LV ++ RI+K + ++D+GTG Sbjct: 68 VQYLIGTEEFYGRSFIVNEHVLIPRPETEELVYGMIS----RIKKEFQHQPIELVDIGTG 123 Query: 108 TGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGL 164 +GA+ + L E + DI+ ++L +AK NA + F D LQ S+ + Sbjct: 124 SGAIAITLALELDRVEVTATDIAIESLSVAKENAQNLDAAVTFIQGDLLQPFLLSNQK-- 181 Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224 FDVIVSNPPYI + D L V+D +P +L GG DGL YR + + + + Sbjct: 182 FDVIVSNPPYIPA--DDELSTVVKDHEPNRALFGGKDGLDFYRRFMEELPYVTKSNSIIG 239 Query: 225 VEIGYNQKVDVVRIFESRKLF---LVNAFKDYGGNDRVLL 261 E+G Q DV + + K F V D G DR++ Sbjct: 240 FEVGAGQTKDVAEMLQ--KTFPTAFVECVYDINGKDRMVF 277 >gi|307721343|ref|YP_003892483.1| modification methylase, HemK family [Sulfurimonas autotrophica DSM 16294] gi|306979436|gb|ADN09471.1| modification methylase, HemK family [Sulfurimonas autotrophica DSM 16294] Length = 276 Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 76/261 (29%), Positives = 125/261 (47%), Gaps = 18/261 (6%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 +A R++ L + +I +S + + Q+ L + R +K+E + I FY Sbjct: 24 RAAREAQLLLMMHLEVDELWLITHQNSEVKETQQ--LLKWVERRVKNEPLEYITNSVSFY 81 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 + + PRPETELL+D + ++P +K + ++G G+G + + L K Sbjct: 82 SEEFYIDEGALIPRPETELLIDEVIK-NVP--DKNSALTFAEVGVGSGIISIMLAKTFKN 138 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181 K + VDIS KAL++A+ N G+ E + V D +VSNPPYIE Sbjct: 139 SKIIAVDISQKALDVAQKNIEKFGLQECIELRLGSLLEPVHEKIDYLVSNPPYIEE---- 194 Query: 182 CLGLEVR---DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238 G+E+ ++P+ +L GG+ G + + D V + K S EIGY+Q+ D +R Sbjct: 195 --GVELESNLSYEPQNALFGGMVGDEIIKKLLDEVLKQ--KIKFFSCEIGYDQQ-DKIRT 249 Query: 239 FESRKLF-LVNAFKDYGGNDR 258 +K F + +KDY DR Sbjct: 250 HIQKKDFKAITFYKDYSSFDR 270 >gi|57234022|ref|YP_181924.1| HemK family modification methylase [Dehalococcoides ethenogenes 195] gi|57224470|gb|AAW39527.1| modification methylase, HemK family [Dehalococcoides ethenogenes 195] Length = 277 Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 78/262 (29%), Positives = 122/262 (46%), Gaps = 16/262 (6%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVL--DDRQRFFLTNAIVRSLKHESIHRILGWRD 59 +A ++ L G+S Q+ ++ + L D +F T + R L+ E I G ++ Sbjct: 21 EARLEAEILLRHTLGISRVQLHLELERELHPDKEAAYFQT--LKRRLEGEPSAYITGAKE 78 Query: 60 FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR-DVVRILDLGTGTGAVCLALLKE 118 FY + PRPETE L++ AL RI + + I D+GTG+GA+ + L E Sbjct: 79 FYGRAFQVDKRVLIPRPETEHLIEKAL-----RIARSYESPYIADIGTGSGAIAITLALE 133 Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESV 178 DIS +ALE+A++NA + +R + D S+ + D++++N PY+ + Sbjct: 134 LKDAYVYATDISAEALEVARNNAAEYRLEKRLMFYRGDLLESLPEMVDILMANLPYVPTA 193 Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ-KVDVVR 237 L +P +LDGG DGL YR + + L G +EIG +Q +V Sbjct: 194 EAGLL-----KGEPVSALDGGADGLDIYRRLIPVLPGKLRPGGTALLEIGIHQSEVLANY 248 Query: 238 IFESRKLFLVNAFKDYGGNDRV 259 I E V DY G RV Sbjct: 249 IKEYLPQAAVEISPDYAGIPRV 270 >gi|326328817|ref|ZP_08195153.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Nocardioidaceae bacterium Broad-1] gi|325953439|gb|EGD45443.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Nocardioidaceae bacterium Broad-1] Length = 273 Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 63/209 (30%), Positives = 101/209 (48%), Gaps = 17/209 (8%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV-- 99 +VR + E + ILGW +F +R+ ++ F PR + L+V+ L R V Sbjct: 58 VVRRVAGEPLELILGWAEFCGLRIRVAPGVFVPRQRSGLVVE------LVETTLRGTVAP 111 Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG---VSERFDTLQSD 156 ++LDL GTGA+ A+ P + DI A+E A++N + G + + +D L D Sbjct: 112 KVLDLCCGTGALGAAVAVRRPDVRMWATDIDPAAVECARANLSSGGQVLLGDLYDPLPHD 171 Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216 FDVIV+N PY+ S + + E RD + ++LDGG DGL R + + +H Sbjct: 172 LA------FDVIVANAPYVPSDQIRNMPPEARDHEHHVALDGGADGLDVQRRVIEQAPKH 225 Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRKLF 245 L G+ +E G Q + ++ L Sbjct: 226 LAPGGVLVIEAGQEQAPVTASLMRAQGLV 254 >gi|313636274|gb|EFS02085.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Listeria seeligeri FSL S4-171] Length = 283 Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 78/247 (31%), Positives = 110/247 (44%), Gaps = 10/247 (4%) Query: 16 GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75 GLS ++ ++ + L+ R L E + IL FY ++ D PR Sbjct: 34 GLSRSELWMEINRELEPNHEKQFQADFERYLSGEPVQYILKTAPFYGYDFLVTEDVLIPR 93 Query: 76 PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135 PETE LV A AF ++K + +LD+ TG+G + + L K P DIS AL Sbjct: 94 PETEELVACAEAF----LKKNPLPTVLDVCTGSGIIAITLKKAFPEVLVTASDISGPALA 149 Query: 136 IAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDP 192 IAK NA+ RF D L+S F FD++++NPPYI + V +P Sbjct: 150 IAKKNALLLNADVRFVETDLLES--FKQNGERFDMVLANPPYISEAEKAEMSDYVLKNEP 207 Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE-SRKLFLVNAFK 251 ++L DGL+ Y + + LN VEIGY Q V +F+ S V K Sbjct: 208 ALALFAENDGLAIYERFVEDLQYVLNPSFWVGVEIGYTQGEKVKDLFQKSYPHSTVVIHK 267 Query: 252 DYGGNDR 258 D DR Sbjct: 268 DINSKDR 274 >gi|257090699|ref|ZP_05585060.1| modification methylase hemK [Enterococcus faecalis CH188] gi|312905240|ref|ZP_07764360.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis TX0635] gi|256999511|gb|EEU86031.1| modification methylase hemK [Enterococcus faecalis CH188] gi|310631477|gb|EFQ14760.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis TX0635] gi|315579265|gb|EFU91456.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis TX0630] Length = 277 Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 63/212 (29%), Positives = 104/212 (49%), Gaps = 17/212 (8%) Query: 54 ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113 +LG +FY ++ T PRPETE LV+ L + + ++D+GTGTGA+ + Sbjct: 73 LLGQAEFYGHSFIVNEHTLIPRPETEELVERCL-----KANPDTPLTVVDVGTGTGAIAI 127 Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVS 170 +L P ++ + +D+S +AL +AK NA G F + LQ + D+++S Sbjct: 128 SLKLARPNWRVIAIDLSEEALTVAKQNAQALGAGIEFYHGNGLQPVASEKI----DLLIS 183 Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230 NPPYI + VR ++P+ +L +GL+ Y+ + L DG EIG+ Sbjct: 184 NPPYISEQEWYLMDASVRTYEPKTALFAENNGLALYQQLIHESQTMLKADGKIYFEIGFQ 243 Query: 231 QKVDVVRIFES---RKLFLVNAFKDYGGNDRV 259 Q + + + +K + KD GNDR+ Sbjct: 244 QGAALQELLSAAYPQKTIKIE--KDLSGNDRL 273 >gi|160885547|ref|ZP_02066550.1| hypothetical protein BACOVA_03547 [Bacteroides ovatus ATCC 8483] gi|299147399|ref|ZP_07040464.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacteroides sp. 3_1_23] gi|156109169|gb|EDO10914.1| hypothetical protein BACOVA_03547 [Bacteroides ovatus ATCC 8483] gi|298514677|gb|EFI38561.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacteroides sp. 3_1_23] Length = 278 Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 80/257 (31%), Positives = 116/257 (45%), Gaps = 12/257 (4%) Query: 12 CRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDT 71 C + GL + + + D +L + ++ L N I R K+E I I G+ +F ++S Sbjct: 30 CDMLGLDALDIYMGKDIILSECKQRELENIIFRLQKNEPIQYIRGFAEFSGRNFKVASGV 89 Query: 72 FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131 PRPET LV+ + E + +LD+GTG+G + ++L K+ P DIS Sbjct: 90 LIPRPETAELVELIVK------ENPNARHLLDIGTGSGCIAISLDKKLPDVDVEAWDISE 143 Query: 132 KALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVR 188 +AL IA+ N RF D L DW FDVIVSNPPY+ + + V Sbjct: 144 EALAIARKNNEDLEAGVRFLQRDVLSDDWEKVPS--FDVIVSNPPYVTETEKNEMDANVL 201 Query: 189 DFDPRISL-DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLV 247 D++P ++L D L Y IA S L G EI + I E + V Sbjct: 202 DWEPGLALFVPDEDPLRFYNRIACLGSELLLPGGKLYFEINQAYGRETAHILEMNQYRDV 261 Query: 248 NAFKDYGGNDRVLLFCR 264 KD G DR++ R Sbjct: 262 RVIKDIFGKDRIVTANR 278 >gi|329939827|ref|ZP_08289128.1| methylase [Streptomyces griseoaurantiacus M045] gi|329301397|gb|EGG45292.1| methylase [Streptomyces griseoaurantiacus M045] Length = 279 Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 75/240 (31%), Positives = 108/240 (45%), Gaps = 11/240 (4%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ V G+ Q+ D+ D R + R E + I G F + L Sbjct: 24 DAEELAAFVHGVKRGQLHTVKDTDFDAR----YWEVVARREAREPLQHITGRAFFRYLEL 79 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR--ILDLGTGTGAVCLALLKESPFFK 123 + F PRPETE S + +++ + DVV I+DL TG+GA+ LAL +E P + Sbjct: 80 QVGPGVFVPRPETE----SVVGWAIDAVRAMDVVEPCIVDLCTGSGAIALALAQEVPRSR 135 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183 V++S A E A+ N + V R + F ++G D++VSNPPYI + + Sbjct: 136 VHAVELSEDAHEWARKNMEGSRVELRQGNALTA-FPDLDGQVDLVVSNPPYIPLTEWEYV 194 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 E RD DP ++L G DGL R + R L G+ VE Q V IF K Sbjct: 195 APEARDHDPELALFSGEDGLDLIRGLERTAHRLLRPGGVVVVEHADTQGGQVPWIFAEEK 254 >gi|298482443|ref|ZP_07000629.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacteroides sp. D22] gi|295088114|emb|CBK69637.1| HemK family putative methylases [Bacteroides xylanisolvens XB1A] gi|298271422|gb|EFI12997.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacteroides sp. D22] Length = 278 Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 80/257 (31%), Positives = 117/257 (45%), Gaps = 12/257 (4%) Query: 12 CRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDT 71 C + GL + + + D +L + ++ L N I R K+E I I G +F ++S Sbjct: 30 CDMLGLDALDIYMGKDIILSECKQRELENIIFRLQKNEPIQYIHGIAEFCGRNFKVASGV 89 Query: 72 FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131 PRPET LV+ + E + R+LD+GTG+G + ++L K+ P K DIS Sbjct: 90 LIPRPETAELVELIVE------ENPNARRLLDIGTGSGCIAISLDKKLPDAKVEAWDISE 143 Query: 132 KALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVR 188 +AL IA+ N RF D L DW FDVIVSNPPY+ + + V Sbjct: 144 EALAIARKNNDALEARVRFLQRDVLADDWEKIPS--FDVIVSNPPYVTETEKNEMDANVL 201 Query: 189 DFDPRISL-DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLV 247 +++P ++L D L Y IA S L G EI + I E + V Sbjct: 202 EWEPGLALFVPDEDPLRFYNRIARLGSELLLPGGKLYFEINQAYGRETAHILEMNQYRDV 261 Query: 248 NAFKDYGGNDRVLLFCR 264 +D G DR++ R Sbjct: 262 RVIRDIFGKDRIVTANR 278 >gi|168185913|ref|ZP_02620548.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Clostridium botulinum C str. Eklund] gi|169296020|gb|EDS78153.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Clostridium botulinum C str. Eklund] Length = 292 Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 64/212 (30%), Positives = 105/212 (49%), Gaps = 7/212 (3%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110 + ILG +F + T+ PR +TE+LV+ + I+ +I D+ G+GA Sbjct: 70 VKYILGECEFMGLNFTIKEGVLIPRADTEILVEEVI----KEIKNNGYTKICDVCCGSGA 125 Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDV 167 + +++ K DIS A+E+ N + +R +SD + + F++ Sbjct: 126 IGVSIGKYIENSIVDCYDISDIAIEVTNKNINRFLLEDRVKVRKSDLLTVAKEENKKFNI 185 Query: 168 IVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227 IVSNPPYI+ ++ L +V+ F+P I+L GG DGL Y+ I + + L +DGL + EI Sbjct: 186 IVSNPPYIKEKVIPTLMDDVKKFEPYIALCGGADGLDFYKKIINQSLQLLEEDGLLAFEI 245 Query: 228 GYNQKVDVVRIFESRKLFLVNAFKDYGGNDRV 259 GY+Q +V + V D G +RV Sbjct: 246 GYDQGEEVKELLIKNGFSCVRVINDLAGLNRV 277 >gi|212695384|ref|ZP_03303512.1| hypothetical protein BACDOR_04933 [Bacteroides dorei DSM 17855] gi|212662019|gb|EEB22593.1| hypothetical protein BACDOR_04933 [Bacteroides dorei DSM 17855] Length = 278 Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 77/252 (30%), Positives = 116/252 (46%), Gaps = 6/252 (2%) Query: 10 FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69 L +V G+S ++ D+ ++ L + +VR K E I I+G +FY + ++ Sbjct: 28 LLTQVFGMSVVELYAGKDTTFSVNEQKRLDDILVRLQKLEPIQYIIGTEEFYGLTFEVNK 87 Query: 70 DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129 PRPET LVD + R K V+ILD+GTG+G + ++L K + V D+ Sbjct: 88 HVLIPRPETGELVDWII-----REHKYGRVKILDIGTGSGCIAVSLTKNLEEAEVVSWDV 142 Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRD 189 S KAL++A+ N NGV + S FDVIVSNPPYI + V + Sbjct: 143 SEKALQVAERNCRRNGVRVTLEQRDVLLASPAGEQFDVIVSNPPYITEKEKANMSANVLE 202 Query: 190 FDPRISLDGGIDG-LSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN 248 ++P ++L D L YR IA+ L G EI + V + + Sbjct: 203 WEPELALFVPDDSPLLFYRKIAELGRDMLVSGGRLYFEINQEYGRETVDMLAGLGYKNIE 262 Query: 249 AFKDYGGNDRVL 260 KD NDR++ Sbjct: 263 LRKDLFQNDRMI 274 >gi|297192052|ref|ZP_06909450.1| methyltransferase [Streptomyces pristinaespiralis ATCC 25486] gi|197719498|gb|EDY63406.1| methyltransferase [Streptomyces pristinaespiralis ATCC 25486] Length = 281 Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 66/203 (32%), Positives = 100/203 (49%), Gaps = 9/203 (4%) Query: 40 NAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV 99 A+ R E + I G F + L + F PRPETE S + +++ + DVV Sbjct: 56 EAVARREAREPLQHITGRAFFRYLELQVGPGVFVPRPETE----SVVGWAIEAVRAMDVV 111 Query: 100 R--ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSD 156 I+DL +G+GA+ LA+ +E P + V++S AL+ + NA + V+ D L + Sbjct: 112 EPLIVDLCSGSGAIALAMAQEVPRSRVHAVELSEDALKWTRKNAEGSRVTVHHGDALTA- 170 Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216 ++G D+++SNPPYI + + E RD DP+++L G DGL R I R Sbjct: 171 -LPELDGQVDLVISNPPYIPLTEWEYVAPEARDHDPQMALFSGEDGLDTIRGIERTAHRL 229 Query: 217 LNKDGLCSVEIGYNQKVDVVRIF 239 L GL +E Q V IF Sbjct: 230 LRPGGLVVIEHADTQGGQVPWIF 252 >gi|29377041|ref|NP_816195.1| hemK protein [Enterococcus faecalis V583] gi|227554051|ref|ZP_03984098.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Enterococcus faecalis HH22] gi|257419964|ref|ZP_05596958.1| modification methylase hemK [Enterococcus faecalis T11] gi|29344507|gb|AAO82265.1| hemK protein [Enterococcus faecalis V583] gi|227176799|gb|EEI57771.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Enterococcus faecalis HH22] gi|257161792|gb|EEU91752.1| modification methylase hemK [Enterococcus faecalis T11] gi|315574711|gb|EFU86902.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis TX0309B] gi|315580977|gb|EFU93168.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis TX0309A] Length = 277 Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 63/212 (29%), Positives = 104/212 (49%), Gaps = 17/212 (8%) Query: 54 ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113 +LG +FY ++ T PRPETE LV+ L + + ++D+GTGTGA+ + Sbjct: 73 LLGQAEFYGHSFIVNEHTLIPRPETEELVERCL-----KANPDTPLTVVDVGTGTGAIAV 127 Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVS 170 +L P ++ + +D+S +AL +AK NA G F + LQ + D+++S Sbjct: 128 SLKLARPNWRVIAIDLSEEALTVAKQNAQALGAGIEFYHGNGLQPVASEKI----DLLIS 183 Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230 NPPYI + VR ++P+ +L +GL+ Y+ + L DG EIG+ Sbjct: 184 NPPYISEQEWYLMDASVRTYEPKTALFAENNGLALYQQLIHESQTMLKADGKIYFEIGFQ 243 Query: 231 QKVDVVRIFES---RKLFLVNAFKDYGGNDRV 259 Q + + + +K + KD GNDR+ Sbjct: 244 QGAALQELLSAAYPQKTIKIE--KDLSGNDRL 273 >gi|237711579|ref|ZP_04542060.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] gi|237725968|ref|ZP_04556449.1| conserved hypothetical protein [Bacteroides sp. D4] gi|229435776|gb|EEO45853.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4] gi|229454274|gb|EEO59995.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] Length = 278 Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 77/252 (30%), Positives = 116/252 (46%), Gaps = 6/252 (2%) Query: 10 FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69 L +V G+S ++ D+ ++ L + +VR K E I I+G +FY + ++ Sbjct: 28 LLTQVFGMSVVELYAGKDTTFSVNEQKRLDDILVRLQKLEPIQYIIGTEEFYGLTFEVNK 87 Query: 70 DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129 PRPET LVD + R K V+ILD+GTG+G + ++L K + V D+ Sbjct: 88 HVLIPRPETGELVDWII-----REHKYGRVKILDIGTGSGCIAVSLTKNLEEAEVVSWDV 142 Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRD 189 S KAL++A+ N NGV + S FDVIVSNPPYI + V + Sbjct: 143 SEKALQVAERNCRRNGVRVTLEQRDVLLASPAGEQFDVIVSNPPYITEKEKANMSANVLE 202 Query: 190 FDPRISLDGGIDG-LSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN 248 ++P ++L D L YR IA+ L G EI + V + + Sbjct: 203 WEPELALFVPDDSPLLFYRKIAELGRDMLVSGGRLYFEINQEYGRETVDMLAGLGYKNIE 262 Query: 249 AFKDYGGNDRVL 260 KD NDR++ Sbjct: 263 LRKDLFQNDRMI 274 >gi|270308381|ref|YP_003330439.1| modification methylase, HemK family [Dehalococcoides sp. VS] gi|270154273|gb|ACZ62111.1| modification methylase, HemK family [Dehalococcoides sp. VS] Length = 277 Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 70/226 (30%), Positives = 106/226 (46%), Gaps = 14/226 (6%) Query: 40 NAIVRSLKH--ESIHR--ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEK 95 A ++LKH E + I G ++FY + PRPETE L++ AL + Sbjct: 55 TAYFQTLKHRLEGVPSAYITGEKEFYGRTFQVDKRVLIPRPETEHLIEKALRIA----RS 110 Query: 96 RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155 + I D+GTG+GA+ + L E DIS +ALEIA++NA + +R + Sbjct: 111 YESPYIADIGTGSGAIAITLALELKDAYVYATDISAEALEIARNNAAEYRLGKRLTFYRG 170 Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215 D S+ + D++ +N PY+ + L +P ++LDGG DGL YR + + Sbjct: 171 DLLESLPEMVDILTANLPYVPTTETKLL-----KGEPLLALDGGADGLDIYRRLIPVLPG 225 Query: 216 HLNKDGLCSVEIGYNQ-KVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 L G +EIG +Q +V I E V DY G RV+ Sbjct: 226 KLRPGGTALLEIGIHQSEVLAKYIKEYLPQAAVEISPDYAGIPRVV 271 >gi|325914285|ref|ZP_08176635.1| (protein release factor)-glutamine N5-methyltransferase [Xanthomonas vesicatoria ATCC 35937] gi|325539540|gb|EGD11186.1| (protein release factor)-glutamine N5-methyltransferase [Xanthomonas vesicatoria ATCC 35937] Length = 284 Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 70/221 (31%), Positives = 108/221 (48%), Gaps = 7/221 (3%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101 + R E + + G R F+ + L +S+ T PR +TE LV+ +L R++ R+ Sbjct: 61 VQRRQAGEPVAYLTGSRGFWTLDLAVSTATLIPRADTEALVE----LALERLDHAPGRRV 116 Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 DLG G+GA+ LA+ E P + + D S AL IA+ NA ++G+S WF+ + Sbjct: 117 ADLGAGSGAIALAIASERPQAQVIATDASAAALAIAQRNADSHGLSN-VHCRHGSWFAPL 175 Query: 162 EG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220 G FD+I SNPPYI + ++R ++P +L G DGL R+I HL Sbjct: 176 AGERFDLIASNPPYIAAGDPHLAQGDLR-YEPASALASGSDGLDDIRSIVADAPAHLRAG 234 Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 G +E G++Q V + V +D +RV L Sbjct: 235 GWLLLEHGWDQGAAVAELLRRCGFAQVATHQDLEQRERVTL 275 >gi|170759851|ref|YP_001785467.1| HemK family modification methylase [Clostridium botulinum A3 str. Loch Maree] gi|169406840|gb|ACA55251.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Clostridium botulinum A3 str. Loch Maree] Length = 283 Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 71/258 (27%), Positives = 119/258 (46%), Gaps = 7/258 (2%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L ++ ++ +PD + D ++ I I ILG +F + Sbjct: 25 DAQLLLGKILKKDRLFILTNPDYHIKDEEKEKYFQLIELRKNKMPIKYILGTTEFMGLDF 84 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 + PRP+TE+LV++ L I+ ++ +I D+ G+G + + + + + Sbjct: 85 NIEKGVLIPRPDTEILVETVLE----EIKNKNYKQICDVCCGSGIIGITIGYTLNNTEII 140 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIVDC 182 DI K N + + + +R L+SD + + FD+IVSNPPYI+ +++ Sbjct: 141 CYDIEDIPYNTTKENILKHNLQDRIKVLKSDLLTEAIKEKRKFDLIVSNPPYIKEDVIET 200 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 L +V+ ++P +L GG DGL Y I LN G + EIGY+QK+ V I Sbjct: 201 LMDDVKKYEPLEALCGGKDGLFFYEGIIKQSLEVLNDGGTIAFEIGYDQKIQVSHILNEY 260 Query: 243 KLFLVNAFKDYGGNDRVL 260 V KD G DRV+ Sbjct: 261 GFKDVLCIKDLAGRDRVI 278 >gi|332701397|ref|ZP_08421485.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Desulfovibrio africanus str. Walvis Bay] gi|332551546|gb|EGJ48590.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Desulfovibrio africanus str. Walvis Bay] Length = 288 Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 67/217 (30%), Positives = 107/217 (49%), Gaps = 8/217 (3%) Query: 47 KHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGT 106 K E + I G R+FY + + PRPETE +++ P +R DLGT Sbjct: 68 KGEPLAYIRGQREFYGLEFIVRPGVLIPRPETEGIIEEVRRLYDPD----SCLRFADLGT 123 Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGL 164 G+GA+ + + P +G+ VD S AL A+ NA+ + V R ++ D+ S++ Sbjct: 124 GSGALGVTMGVVFPRARGLLVDTSDVALRTARENALRHKVDSRVSVVKGDFMSALFRPRS 183 Query: 165 FDVIVSNPPYI-ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223 + I+SNPPYI ES + D + V ++PR +L G GL Y +A L G Sbjct: 184 LECIISNPPYIGESDLAD-VEPAVLAWEPRSALIAGRSGLEAYPALAVRAWDALLPGGHM 242 Query: 224 SVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 +E+G++Q +VRI + +D G+DR++ Sbjct: 243 LLEMGWSQGSHLVRILRDVGFCSIRVLQDLAGHDRIV 279 >gi|302558380|ref|ZP_07310722.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptomyces griseoflavus Tu4000] gi|302475998|gb|EFL39091.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptomyces griseoflavus Tu4000] Length = 281 Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 72/236 (30%), Positives = 108/236 (45%), Gaps = 11/236 (4%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ V G+ ++ DS D R I R E + I G F + L Sbjct: 26 DAEELAAFVHGVKRGELHAVKDSDFDAR----YWEVIARREAREPLQHITGHAYFRYLEL 81 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR--ILDLGTGTGAVCLALLKESPFFK 123 + F PRPETE S + +++ + DVV I+DL TG+GA+ LAL +E P + Sbjct: 82 QVGPGVFVPRPETE----SVVGWAIDAVRAMDVVEPCIVDLCTGSGAIALALAQEVPRSR 137 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183 V++S AL + N + V R + F ++G D++++NPPYI + + Sbjct: 138 VYAVELSEDALRWTRKNMEGSRVELRQGNALTA-FPDLDGQVDLVITNPPYIPLTEWEYV 196 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 E RD+DP+++L G DGL R + R L G+ VE Q V IF Sbjct: 197 APEARDYDPQLALFSGEDGLDLIRGLERTAHRLLRPGGVVVVEHADTQGGQVPWIF 252 >gi|270006518|gb|EFA02966.1| hypothetical protein TcasGA2_TC030615 [Tribolium castaneum] Length = 264 Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 63/180 (35%), Positives = 91/180 (50%), Gaps = 26/180 (14%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110 + +LG F + L +S F PRPETE LVD L I++++ L+L G+GA Sbjct: 66 VQYVLGECYFRQLVLKMSPPVFIPRPETEQLVDIVLG----EIDRKNCRHFLELCCGSGA 121 Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS---DWFSSVEGLFDV 167 + L+LL+E P KG +D S A + K NA G+++R +QS W + FD+ Sbjct: 122 IALSLLQERPQIKGTALDQSKAACHLTKENAQKAGLNKRIRIIQSQLAQWHRCEK--FDI 179 Query: 168 IVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227 IVSNPPY D +LDGG+DGL + I + S LN +G +E+ Sbjct: 180 IVSNPPY--------------DLQ---ALDGGVDGLKVIKQILELSSECLNMNGKLFLEV 222 >gi|254805411|ref|YP_003083632.1| putative adenine-specific methylase [Neisseria meningitidis alpha14] gi|254668953|emb|CBA07226.1| putative adenine-specific methylase [Neisseria meningitidis alpha14] Length = 303 Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 54/144 (37%), Positives = 81/144 (56%), Gaps = 2/144 (1%) Query: 91 PRIEKRDVVR-ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 P IE ++V LDL TG+G + + + P + VD+S ALE+A N G+ ER Sbjct: 127 PWIEYDELVHNALDLCTGSGCLAIQMAHHYPDAQIDAVDVSLDALEVAGINVEDYGLEER 186 Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209 + +D F +EG +D+IVSNPPY+++ V+ L E +P ++L G DGL R I Sbjct: 187 IQLIHTDLFEGLEGTYDLIVSNPPYVDAESVELLPEEYL-HEPELALGSGADGLDATRQI 245 Query: 210 ADGVSRHLNKDGLCSVEIGYNQKV 233 ++ LN G+ VEIG+N+ V Sbjct: 246 LLNAAKFLNPKGVLLVEIGHNRDV 269 >gi|313681984|ref|YP_004059722.1| protein-(glutamine-n5) methyltransferase, release factor-specific [Sulfuricurvum kujiense DSM 16994] gi|313154844|gb|ADR33522.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Sulfuricurvum kujiense DSM 16994] Length = 274 Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 61/199 (30%), Positives = 103/199 (51%), Gaps = 9/199 (4%) Query: 60 FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119 FY+ + PRPETE LVD L+ R+ DV+ I+++G G+G + + L Sbjct: 79 FYSREFYIDEGALIPRPETEHLVDEVLS----RVPADDVITIVEVGIGSGIISILLALHL 134 Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179 P + + VDIS KAL +A+ N G+S+R + + D S ++ D++VSNPPYI Sbjct: 135 PQARLIAVDISPKALAVARRNIEAFGLSDRIELREGDLLSCIDEKIDLLVSNPPYIAH-- 192 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 D ++P+ +L GG G + + D V + + + + E+GY+Q++ V Sbjct: 193 -DAPLESNLSYEPQNALFGGDVGDEIIQRLLDEVYKR--RIPMFACEMGYDQRIKVQEYL 249 Query: 240 ESRKLFLVNAFKDYGGNDR 258 +S + ++ + DY DR Sbjct: 250 KSFAVQSLDFYTDYASFDR 268 >gi|239928893|ref|ZP_04685846.1| methylase [Streptomyces ghanaensis ATCC 14672] gi|291437220|ref|ZP_06576610.1| methylase [Streptomyces ghanaensis ATCC 14672] gi|291340115|gb|EFE67071.1| methylase [Streptomyces ghanaensis ATCC 14672] Length = 281 Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 74/236 (31%), Positives = 110/236 (46%), Gaps = 11/236 (4%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ V G+ ++ DS D R I R E + I G F + L Sbjct: 26 DAEELAAFVHGVKRGELHTVKDSDFDAR----YWEVIARREAREPLQHITGRAYFRYLEL 81 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV--RILDLGTGTGAVCLALLKESPFFK 123 + F PRPETE +V+ +++ + DVV RI+DL TG+GA+ LAL +E P + Sbjct: 82 QVGPGVFVPRPETESVVE----WAIDAVRAMDVVEPRIVDLCTGSGAIALALAQEVPRSR 137 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183 V++S AL + N + V R + F ++G D+++SNPPYI + + Sbjct: 138 VHAVELSEDALVWTRRNMDGSRVELRQGNALTA-FPDLDGQVDLVISNPPYIPLTEWEYV 196 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 E RD+DP+++L G DGL R + R L G+ VE Q V IF Sbjct: 197 APEARDYDPQLALFSGEDGLDLIRGLERTAHRLLRPGGVVVVEHADTQGGQVPWIF 252 >gi|325294566|ref|YP_004281080.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Desulfurobacterium thermolithotrophum DSM 11699] gi|325065014|gb|ADY73021.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Desulfurobacterium thermolithotrophum DSM 11699] Length = 288 Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 66/220 (30%), Positives = 107/220 (48%), Gaps = 7/220 (3%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101 I R K E + + G ++F+ + PRPETELLV+ + ++ ++ I Sbjct: 70 IKRRAKGEPVAYLTGEKEFFGFTFKVQKGVLIPRPETELLVEVVYDY----LKDKEDKTI 125 Query: 102 LDLGTGTGAVCLALLKE-SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +D+GTG+G + L L K + +G DIS AL++A N G + + ++ D Sbjct: 126 VDVGTGSGCIILTLYKLLGDKHRYIGTDISSIALKVANENKELLGCN-NVEIVKMDLLKE 184 Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220 + DVIVSNPPYI L EV ++P ++L GG GL + ++ L+ + Sbjct: 185 INYPVDVIVSNPPYI-PFGDKKLDKEVLKYEPAVALFGGKSGLEIVERLIGESAKKLSSN 243 Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 G ++EIG Q V ++ E + KD G +RV+ Sbjct: 244 GFFAIEIGKGQSKGVKKLLEKAGFRNIKLHKDLAGVERVI 283 >gi|325103647|ref|YP_004273301.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Pedobacter saltans DSM 12145] gi|324972495|gb|ADY51479.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Pedobacter saltans DSM 12145] Length = 277 Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 70/216 (32%), Positives = 101/216 (46%), Gaps = 12/216 (5%) Query: 49 ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108 + + +I+G DFY + ++ PRPETE LV + + K V +LD+GTG+ Sbjct: 64 KPVQQIIGKADFYGYKFIVNEHVLIPRPETEELVHEIVKY-----HKHQNVSVLDIGTGS 118 Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLF 165 + +++ K P +D+S +AL +AK NA+ NGV F D L D + F Sbjct: 119 ACISVSIKKGIPEAIVYAIDVSREALTVAKQNALMNGVDIDFYLDDALNLD--AEKYPFF 176 Query: 166 DVIVSNPPYIESVIVDCLGLEVRDFDPRISL-DGGIDGLSHYRTIADGVSRHLNKDGLCS 224 DVIVSNPPYI + V F+P ++L D L Y I+D + LNK G Sbjct: 177 DVIVSNPPYIRESEKKEMHSNVLSFEPHLALFVKDKDPLIFYDKISDFALKRLNKGGFLY 236 Query: 225 VEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 EI + + R F KD N R+L Sbjct: 237 FEINQYLAKETEDLIHKRG-FKTLLIKDINSNFRIL 271 >gi|187251501|ref|YP_001875983.1| protein-(glutamine-N5) methyltransferase [Elusimicrobium minutum Pei191] gi|186971661|gb|ACC98646.1| Protein-(glutamine-N5) methyltransferase [Elusimicrobium minutum Pei191] Length = 277 Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 75/253 (29%), Positives = 125/253 (49%), Gaps = 14/253 (5%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVL--DDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63 ++ L V LS V+ + + + +D Q++F + I + L + I G +DF Sbjct: 26 NAEFLLAHVLNLSRGVVLSNQEREVGAEDAQKYF--DFINKRLLGMPLAYITGTQDFCGH 83 Query: 64 RLTLSSDTFEPRPETELLVD-SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + SD PRPETE LV+ S+ P+ RILD+ TG+G + ++ + Sbjct: 84 TFIVDSDVLVPRPETEELVEISSSMLGKPK-------RILDMCTGSGCIACSMAMKYRSA 136 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182 + GVD S AL A+ N G+ + + + D F ++ G FD+I++NPPYI + + Sbjct: 137 QVTGVDNSMAALLTAEKNVKKFGL-QNVELIYGDLFENIYGAFDLIITNPPYIPTGDLAG 195 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 L EV++ +P+ +LDGG +GL I L GL ++E G N++ ++ +F+ Sbjct: 196 LSREVKE-EPQAALDGGENGLDIITQIILYAPDFLETGGLLTMEYGINREREIEGLFDKN 254 Query: 243 KLFLVNAFKDYGG 255 V KD G Sbjct: 255 IWRSVEVKKDMFG 267 >gi|46198381|ref|YP_004048.1| methyltransferase [Thermus thermophilus HB27] gi|46196003|gb|AAS80421.1| methyltransferase [Thermus thermophilus HB27] Length = 500 Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 67/219 (30%), Positives = 106/219 (48%), Gaps = 9/219 (4%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101 + R L+ + ++G +F+ + L + PRPETE LV+ AL LP RI Sbjct: 67 LKRRLQGYPLQYLVGEVEFFGLPLRVEEGVLIPRPETEGLVELALGLPLP-----PAPRI 121 Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 LD+GTGTGA+ LAL + P + ++ KAL +A+ NA G++ F L + + Sbjct: 122 LDVGTGTGAIALALKRALPEAEVYATEVDPKALALARENAERLGLAVVF--LPAPLTGGL 179 Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221 + L D++VSNPPY+ + E+ ++ ++L G +GLS R +A+ R L G Sbjct: 180 KDL-DLVVSNPPYLPEAYREKAPREL-GYESPLALYAGPEGLSVARPLAEEARRSLKPGG 237 Query: 222 LCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 +E+ + R + V D G DR L Sbjct: 238 YLLLELAPENVHLLARELREKGWKEVAVLPDLAGRDRYL 276 >gi|152992202|ref|YP_001357923.1| protoporphyrinogen oxidase [Sulfurovum sp. NBC37-1] gi|151424063|dbj|BAF71566.1| protoporphyrinogen oxidase [Sulfurovum sp. NBC37-1] Length = 282 Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 65/232 (28%), Positives = 116/232 (50%), Gaps = 10/232 (4%) Query: 27 DSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL 86 + V++D + + + + R +E I+G FY++ L + PRPETE+L+D Sbjct: 54 NDVMEDPESY--RHLVERRAANEPYEYIVGSASFYDLHLEVEKGVLVPRPETEILIDLVA 111 Query: 87 AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146 IE+ + RI ++G G+GA+ + L ++ P V DIS +++A+ N T G+ Sbjct: 112 GI----IEEEKISRIAEIGVGSGAISIVLARKFPELNIVATDISEIPIKVARKNIETFGL 167 Query: 147 SERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206 ++ + +S+ V+ +++VSNPPYI + L V D++P+ +L GG G Sbjct: 168 EKQIELRRSNLIDEVDERVELVVSNPPYIAEGFL--LESNVVDYEPKEALFGGRVGDELL 225 Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258 + I V + C E+GY+QK + + + + +KD G DR Sbjct: 226 KQIILDVKEKGIRWLAC--EMGYDQKEPIASFVKEIGVQSIKFYKDLVGFDR 275 >gi|254431491|ref|ZP_05045194.1| modification methylase, HemK family [Cyanobium sp. PCC 7001] gi|197625944|gb|EDY38503.1| modification methylase, HemK family [Cyanobium sp. PCC 7001] Length = 289 Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 66/213 (30%), Positives = 104/213 (48%), Gaps = 8/213 (3%) Query: 49 ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108 E + ++G + +V L + PR ETELLVD AL R DLGTG+ Sbjct: 70 EPLQYLVGLCPWRDVDLQVGPGVLIPRQETELLVDLALELC-----SRPPALWADLGTGS 124 Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLF 165 G + +AL + P +G+ VD+S +AL A +N + + LQ W+ ++ G Sbjct: 125 GCLAVALARLWPEAQGLAVDLSAEALNQAGTNLQAFERAGQVRLLQGSWWEPLKPWRGSV 184 Query: 166 DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225 + ++NPPYI + + L VRD +PR++L+ G DGL R + G + L GL + Sbjct: 185 QLALANPPYIPTAVWTDLEPVVRDHEPRLALEAGSDGLDAIRAVVAGAATGLAPGGLLLL 244 Query: 226 EIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258 E ++Q V + + L V A +D +R Sbjct: 245 EHHHDQSERVSCLLAAAGLIEVQAHRDLENVNR 277 >gi|194016564|ref|ZP_03055178.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacillus pumilus ATCC 7061] gi|194012037|gb|EDW21605.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacillus pumilus ATCC 7061] Length = 294 Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 76/266 (28%), Positives = 119/266 (44%), Gaps = 9/266 (3%) Query: 2 QALRDSHS---FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWR 58 +A RD ++ L V LS +++ L + Q + + + K + + G Sbjct: 21 EAGRDQNAAELLLMHVLDLSRSELLARFHDQLPEEQDRLFSEFVKQHKKGVPVQHLTGIE 80 Query: 59 DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118 FY ++ PRPETE +V +AL ++ +D+GTG+GA+ + L E Sbjct: 81 FFYGRPFEVNKHVLIPRPETEEVVLAALNLMSDIFPHDQPLQAVDVGTGSGAIAITLALE 140 Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGL-FDVIVSNPPYI 175 DIS +AL +AK N G F LQ D + +G+ D+ +SNPPYI Sbjct: 141 KETLSVTATDISHEALAVAKRNQQALGADVHF--LQGDLLEPIKDQGIKVDLFISNPPYI 198 Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235 + +D L V +P +L G DGL Y+ + + L+K + EIG+ Q DV Sbjct: 199 SAEEMDSLSEVVTKHEPVNALTDGRDGLWFYKRLIRDLHHVLHKQAVVVFEIGHTQGQDV 258 Query: 236 -VRIFESRKLFLVNAFKDYGGNDRVL 260 + +S V KD G DR + Sbjct: 259 KALLLQSFPAADVRIVKDINGKDRAV 284 >gi|237793456|ref|YP_002861008.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Clostridium botulinum Ba4 str. 657] gi|229261092|gb|ACQ52125.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Clostridium botulinum Ba4 str. 657] Length = 283 Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 72/258 (27%), Positives = 117/258 (45%), Gaps = 7/258 (2%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L ++ ++ +PD + D ++ I I ILG +F + Sbjct: 25 DTQLLLGKILKKDRLFILTNPDYHIKDEEKEKYFQLIELRKNKMPIKYILGTTEFMGLDF 84 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 + PRP+TE+LV++ L I+ ++ +I D+ G+G + + + + + Sbjct: 85 NIKKGVLIPRPDTEILVETVLE----EIKNKNYKQICDVCCGSGIIGITIGYTLNNTEII 140 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIVDC 182 DI K N + + + +R L+SD + + FD+IVSNPPYI I+ Sbjct: 141 CYDIEDIPYNTTKENILKHNLQDRIKVLKSDLLTEAIKEKRKFDLIVSNPPYIRENIIKT 200 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 L +V+ ++P +L GG DGL Y I LN G + EIGY+QK+ V I Sbjct: 201 LMDDVKKYEPFEALCGGKDGLFFYEGIIKQSLEVLNDGGTIAFEIGYDQKIQVSHILNEY 260 Query: 243 KLFLVNAFKDYGGNDRVL 260 V KD G DRV+ Sbjct: 261 GFKDVLCIKDLAGKDRVI 278 >gi|295707228|ref|YP_003600303.1| protein-(glutamine-N5) methyltransferase [Bacillus megaterium DSM 319] gi|294804887|gb|ADF41953.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacillus megaterium DSM 319] Length = 283 Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 70/220 (31%), Positives = 107/220 (48%), Gaps = 19/220 (8%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR---DVVRILDLGTG 107 + ++G +FY ++ PRPETE LV ++ RI+K + ++D+GTG Sbjct: 68 VQYLIGTEEFYGRSFIVNEHVLIPRPETEELVYGMIS----RIKKEFQHQPIELVDIGTG 123 Query: 108 TGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGL 164 +GA+ + L E + DI+ ++L +AK NA + F D LQ S+ + Sbjct: 124 SGAIAITLALELDRVEVTATDIAIESLSVAKENAQNLDAAVIFTQGDLLQPFLLSNQK-- 181 Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224 FDVIVSNPPYI + D L V+D +P +L GG DGL YR + + + + Sbjct: 182 FDVIVSNPPYIPA--DDELSTVVKDHEPNRALFGGKDGLDFYRRFMEELPYVTKSNSIIG 239 Query: 225 VEIGYNQKVDVVRIFESRKLF---LVNAFKDYGGNDRVLL 261 E+G Q DV + + K F V D G DR++ Sbjct: 240 FEVGAGQTKDVAEMLQ--KTFPTAFVECVYDINGKDRMVF 277 >gi|297180268|gb|ADI16487.1| methylase of polypeptide chain release factors [uncultured bacterium HF4000_05M23] Length = 287 Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 68/187 (36%), Positives = 91/187 (48%), Gaps = 4/187 (2%) Query: 34 QRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRI 93 Q L + R E + I G +FY R + PRPETE LV A+ F R Sbjct: 56 QLELLETLVSRRAGREPLQYITGSTEFYRRRFAVDPRVLIPRPETEQLVVQAIEFV--RE 113 Query: 94 EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER-FDT 152 + R+ D+ TG+GAV ++L E P + V DIS AL++A+ NA + G F+ Sbjct: 114 RGIETPRVADICTGSGAVAISLALEMPAAEVVATDISAGALDVARHNAGSLGAEVGFFEG 173 Query: 153 LQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212 D G FDVIVSNPPYI + L EV +P ++LDGG DGL R + G Sbjct: 174 ELLDPLLDGHGRFDVIVSNPPYILRGAMPGLQAEVAR-EPSLALDGGDDGLDVIRPLFVG 232 Query: 213 VSRHLNK 219 + L Sbjct: 233 ILEKLKP 239 >gi|293602160|ref|ZP_06684611.1| protein methyltransferase HemK [Achromobacter piechaudii ATCC 43553] gi|292819430|gb|EFF78460.1| protein methyltransferase HemK [Achromobacter piechaudii ATCC 43553] Length = 276 Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 78/227 (34%), Positives = 117/227 (51%), Gaps = 23/227 (10%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL----AFSLPRIEKRD 97 + R L E + +LG R+F R ++ D PRP+TE+LV++AL A + P Sbjct: 55 LARRLAGEPMAYLLGHREFVGHRFLVTPDVLIPRPDTEVLVETALECVAAIAGP------ 108 Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 +LDLGTG+GA+ +++ + + D+S AL++A +NA S RF ++ W Sbjct: 109 --AVLDLGTGSGAIAISIALARRDARVMASDLSAAALKVAAANAWELTASVRF--VEGSW 164 Query: 158 FSSV---EGLFDVIVSNPPYIESVIVDCLGLEVRD--FDPRISLDGGIDGLSHYRTIADG 212 F +V EG FD+IVSNPPY+ S D L+ D F+PR +L G GL I G Sbjct: 165 FDAVPAGEG-FDLIVSNPPYVAS---DDPHLDQGDLRFEPRGALTDGAGGLEDLARIVAG 220 Query: 213 VSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRV 259 RHL G +E G++Q V + S V++ D G +R+ Sbjct: 221 AGRHLKPGGALWMEHGWDQAQAVRELLTSAGFDNVHSRHDLAGIERI 267 >gi|255018346|ref|ZP_05290472.1| hypothetical protein LmonF_12686 [Listeria monocytogenes FSL F2-515] Length = 195 Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 69/187 (36%), Positives = 91/187 (48%), Gaps = 6/187 (3%) Query: 74 PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133 PRPETE LV A AF ++K V +LD+ TG+G + +AL K P DIS A Sbjct: 4 PRPETEELVACAEAF----LKKHPVKNVLDVCTGSGIIAIALKKAFPEISVTASDISAPA 59 Query: 134 LEIAKSNAVTNGVSERF-DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDP 192 L +A+ NA+ RF +T + F E FD+IV+NPPYI + V +P Sbjct: 60 LVVARKNALLLNADVRFVETDLLEAFKQNEERFDMIVANPPYISEAEKAEMSDYVLKNEP 119 Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE-SRKLFLVNAFK 251 ++L DGL+ Y D + LN VEIGY Q V ++FE S V K Sbjct: 120 SLALFAENDGLAIYERFVDNLKYVLNSSFWVGVEIGYTQGERVKQLFEKSYPHTTVVIHK 179 Query: 252 DYGGNDR 258 D DR Sbjct: 180 DINSKDR 186 >gi|42527988|ref|NP_973086.1| HemK family modification methylase [Treponema denticola ATCC 35405] gi|41819033|gb|AAS13005.1| modification methylase, HemK family [Treponema denticola ATCC 35405] Length = 329 Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 72/244 (29%), Positives = 119/244 (48%), Gaps = 35/244 (14%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110 I + G +DF+ ++ + P+P+TE LV+ AL F++ +++K + + +LD+ TG+G Sbjct: 80 IAYLTGTKDFFGRTFYVNENVLIPKPDTETLVELALNFAMEKLKKNEPLFVLDICTGSGC 139 Query: 111 VCLALLKE----------------------SPF---FKGVGVDISCKALEIAKSNA---V 142 + L+L E S F F + DIS +AL++ K N + Sbjct: 140 IGLSLAAELYENLSQTSNAFDKPQRAQRTQSYFDRSFFLILADISEEALKVCKKNMDSLL 199 Query: 143 TNGVSERFDTLQSDW---FSSV---EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL 196 + + +R +++D F V + +D+I +NPPY+ S + + L LE +P ++L Sbjct: 200 PSALYKRALAVKADLHLPFPCVPEPKRSYDLITANPPYVPSRLTESL-LEDGRSEPCLAL 258 Query: 197 DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGN 256 DGGI+GL +A+ LN G VE+G IF S V KD GN Sbjct: 259 DGGIEGLDLIPPLAENSYLSLNLGGKLFVEVGEYHAAQAAEIFRSAGFSQVQIHKDLAGN 318 Query: 257 DRVL 260 DRV+ Sbjct: 319 DRVI 322 >gi|293363670|ref|ZP_06610420.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Mycoplasma alligatoris A21JP2] gi|292552777|gb|EFF41537.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Mycoplasma alligatoris A21JP2] Length = 234 Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 56/178 (31%), Positives = 94/178 (52%), Gaps = 10/178 (5%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110 I +I+G+ ++ NV++ L+ PR ETE LV L+ ++ + ILDL +G+G Sbjct: 34 IQKIIGYVEYANVKINLNHKVLIPRYETEELVYLILS------RHKENIDILDLCSGSGF 87 Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170 + +AL K F DI +A+ ++ N++ N + + +QSD F ++ FD+IVS Sbjct: 88 IGIALKKNQKCFNITLADIDNEAILQSQENSILNDA--KVEIIQSDLFKNINKRFDIIVS 145 Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228 NPPY+ + + V D++P +L GL Y+ I + +LNK+G EI Sbjct: 146 NPPYLMK--NEEISKSVLDYEPHHALYASDQGLYFYKKIINSAKDYLNKNGKIYFEIN 201 >gi|282889839|ref|ZP_06298378.1| hypothetical protein pah_c004o249 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281500413|gb|EFB42693.1| hypothetical protein pah_c004o249 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 285 Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 69/213 (32%), Positives = 110/213 (51%), Gaps = 10/213 (4%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110 + I G +FY+ ++ PR ETE+L D +A +L + + V + D+ G+G Sbjct: 71 LQYITGQVEFYDCSFKVNPAVLIPRNETEILAD-LIAQNLRQQDLSGKV-LWDVCCGSGC 128 Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIV 169 + ++L K+ P + + DIS KAL++AK N+ N V F +Q D+ +G D +V Sbjct: 129 LGISLKKKFPQLRVILADISDKALQVAKENSFLNRVDVEF--VQGDFLQPFKGTQTDFLV 186 Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY 229 NPPYI + L EV+ ++P+ +L GG DGL Y+ + + L G +EIG+ Sbjct: 187 CNPPYIPESDWESLEDEVK-YEPKEALLGGADGLQFYKRLMTELPFFLKPLGKVWLEIGF 245 Query: 230 NQKVDVVRIFESR----KLFLVNAFKDYGGNDR 258 NQ V +FE + + KD+ GNDR Sbjct: 246 NQGTAVQTLFEQNSRGCRWKICRFEKDWSGNDR 278 >gi|213648796|ref|ZP_03378849.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Typhi str. J185] Length = 179 Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 66/162 (40%), Positives = 93/162 (57%), Gaps = 8/162 (4%) Query: 44 RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103 R + E I + G R+F+++ L +S T PRP+TE LV+ ALA R+ + RILD Sbjct: 22 RRKQGEPIAYLTGLREFWSLPLFVSPATLIPRPDTECLVEQALA----RLPVK-TCRILD 76 Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG 163 LGTGTGA+ LAL E P + VD A+ +A NA + LQS WFS++ G Sbjct: 77 LGTGTGAIALALACERPDCEVTAVDRMPDAVALAIRNAEHLAI-RNVRILQSCWFSALSG 135 Query: 164 -LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204 FD+IVSNPPYI++ +VR F+PR +L +G++ Sbjct: 136 QQFDMIVSNPPYIDAQDPHLSEGDVR-FEPRSALVADENGMA 176 >gi|269114935|ref|YP_003302698.1| Protoporphinogen oxydase HEMK [Mycoplasma hominis] gi|268322560|emb|CAX37295.1| Protoporphinogen oxydase HEMK [Mycoplasma hominis ATCC 23114] Length = 235 Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 73/252 (28%), Positives = 127/252 (50%), Gaps = 32/252 (12%) Query: 23 IVDPDSVLDDRQRF----FLTNAIVRSLKHE-SIHRILGWRDFYNVRLTLSSDTFEPRPE 77 ++D + +L +++R+ +++ +R LK + + +I+G+++F NV L L T PR E Sbjct: 1 MIDKEILLREKERYNLPLYISKKELRMLKKDIPVQKIIGYQEFQNVILNLKYKTLIPRYE 60 Query: 78 TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV---DISCKAL 134 TE ++ +A F I+K ++LDLG G+G + LA+ K K V DIS A+ Sbjct: 61 TEEVILAAYPF----IKKES--KVLDLGCGSGLIGLAIKKN----KDANVTLSDISRFAI 110 Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYI--ESVIVDCLGLEVRDFDP 192 + K NA N ++ + ++S+WF+ + FDVIV NPPY+ + ++ L E P Sbjct: 111 KQTKINAKLNNLN--VNVIRSNWFNKITSKFDVIVCNPPYLKKQKKLIKSLKWE-----P 163 Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKD 252 + +L +GL Y+ I +LN+ G+ E+ ++ K V KD Sbjct: 164 KRALFARDNGLFAYKKILKSAFNYLNEKGIIIFEVD-----PYCSLWFKNKFPNVLILKD 218 Query: 253 YGGNDRVLLFCR 264 DR+ L + Sbjct: 219 INNKDRIALLAK 230 >gi|198282492|ref|YP_002218813.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Acidithiobacillus ferrooxidans ATCC 53993] gi|218665801|ref|YP_002424682.1| ribosomal protein L3 N-methyltransferase [Acidithiobacillus ferrooxidans ATCC 23270] gi|198247013|gb|ACH82606.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Acidithiobacillus ferrooxidans ATCC 53993] gi|218518014|gb|ACK78600.1| ribosomal protein L3 N-methyltransferase [Acidithiobacillus ferrooxidans ATCC 23270] Length = 303 Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 63/210 (30%), Positives = 103/210 (49%), Gaps = 5/210 (2%) Query: 29 VLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAF 88 +LD + + R + I G F +R ++ PR E ++ A Sbjct: 69 LLDREKTTIFKHFYQREILRRPAAYITGEAWFAGLRFSVDERVLIPRSLLEPFIEEGFA- 127 Query: 89 SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148 P +E V RIL++GTG+G + + L P + VDIS AL +A +N G+ + Sbjct: 128 --PWVEASQVRRILEIGTGSGCMAITLALRFPEAEVDAVDISADALSVAHANIRRYGLED 185 Query: 149 RFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207 R QSD F+++EG +D+I+SNPPY++++ + L E R +PR++L G DGL Sbjct: 186 RVHLHQSDLFAALEGRRYDLILSNPPYVDAIAMAELTPEYR-HEPRLALAAGEDGLDCLL 244 Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237 + + HL G+ VE G ++ + R Sbjct: 245 PLLEQAPHHLEGGGVLVVETGDAEEALIRR 274 >gi|332972989|gb|EGK10929.1| protein-(glutamine-N5) methyltransferase [Kingella kingae ATCC 23330] Length = 312 Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 54/144 (37%), Positives = 83/144 (57%), Gaps = 2/144 (1%) Query: 91 PRIEKRDVV-RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 P IE ++V R LDL TG+G + + + + P + VDIS ALE+A N G+ +R Sbjct: 136 PWIEYPELVHRALDLCTGSGCLAIQMAEHYPAAEIDAVDISLDALEVAAINVEDYGLQDR 195 Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209 + + +D F ++G +D+I+SNPPY+++ V L E +P ++L G DGL R I Sbjct: 196 INLIHTDLFEGLDGTYDLIISNPPYVDAESVAELPEEYL-HEPELALGSGEDGLDATRQI 254 Query: 210 ADGVSRHLNKDGLCSVEIGYNQKV 233 +R LN G+ VEIG+N+ V Sbjct: 255 LLQAARFLNPQGVLLVEIGHNRDV 278 >gi|255506596|ref|ZP_05382235.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Chlamydia trachomatis D(s)2923] gi|289525069|emb|CBJ14539.1| peptide release factor-glutamine N5-methyltransferase [Chlamydia trachomatis Sweden2] gi|296434609|gb|ADH16787.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Chlamydia trachomatis E/150] gi|296438327|gb|ADH20480.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Chlamydia trachomatis E/11023] Length = 290 Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 69/209 (33%), Positives = 98/209 (46%), Gaps = 6/209 (2%) Query: 54 ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113 I G F V L ++ PR ETE+ V+ + + EK D+ G+G + L Sbjct: 69 IHGKVHFLGVELQVTPQVLIPRQETEIFVEQIIGYLQMHKEK---TTFYDVCCGSGCIGL 125 Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173 A+ K P + DIS +AL IA+SNA +N ++ D L D F DV+V NPP Sbjct: 126 AVRKHCPHVRVTLSDISPEALAIAESNARSNALA--VDFLLGDLFDPFSFPADVLVCNPP 183 Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233 Y+ EVR +P +L GG+ GL Y IA + + L G+ +EIG Q Sbjct: 184 YLSYKEFFESDPEVRCHEPWKALVGGVSGLEFYHRIATHIHKILVSGGVGWLEIGSTQGE 243 Query: 234 DVVRIFESRKLFLVNAFKDYGGNDRVLLF 262 DV +IF ++ + KDY DR Sbjct: 244 DVKKIFHAKGI-RGRVLKDYAQLDRFFFL 271 >gi|296315211|ref|ZP_06865152.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Neisseria polysaccharea ATCC 43768] gi|296837844|gb|EFH21782.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Neisseria polysaccharea ATCC 43768] Length = 303 Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 54/144 (37%), Positives = 81/144 (56%), Gaps = 2/144 (1%) Query: 91 PRIEKRDVVR-ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 P IE ++V LDL TG+G + + + P + VD+S ALE+A N G+ ER Sbjct: 127 PWIEYDELVHNALDLCTGSGCLAIQMAHHYPDAQIDAVDVSLDALEVAGINIEDYGLEER 186 Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209 + +D F +EG +D+IVSNPPY+++ V+ L E +P ++L G DGL R I Sbjct: 187 IQLIHTDLFEGLEGTYDLIVSNPPYVDAESVELLPEEYL-HEPELALGSGADGLDATRQI 245 Query: 210 ADGVSRHLNKDGLCSVEIGYNQKV 233 ++ LN G+ VEIG+N+ V Sbjct: 246 LLNAAKFLNPKGVLLVEIGHNRDV 269 >gi|260172133|ref|ZP_05758545.1| putative protoporphyrinogen oxidase [Bacteroides sp. D2] gi|315920442|ref|ZP_07916682.1| conserved hypothetical protein [Bacteroides sp. D2] gi|313694317|gb|EFS31152.1| conserved hypothetical protein [Bacteroides sp. D2] Length = 278 Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 80/257 (31%), Positives = 116/257 (45%), Gaps = 12/257 (4%) Query: 12 CRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDT 71 C + GL + + + D +L + ++ L N I R K+E I I G+ +F ++S Sbjct: 30 CDMLGLDALDIYMGKDIILSECKQRELENIIFRLQKNEPIQYIRGFAEFCGRNFKVASGV 89 Query: 72 FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131 PRPET LV+ + E + +LD+GTG+G + ++L K+ P DIS Sbjct: 90 LIPRPETAELVELIVK------ENPNARHLLDIGTGSGCIAISLDKKLPDVDVEAWDISE 143 Query: 132 KALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVR 188 +AL IA+ N RF D L DW FDVIVSNPPY+ + + V Sbjct: 144 EALAIARKNNEDLEAGVRFLQRDVLSDDWEKVPS--FDVIVSNPPYVTETEKNEMDANVL 201 Query: 189 DFDPRISL-DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLV 247 D++P ++L D L Y IA S L G EI + I E + V Sbjct: 202 DWEPGLALFVPDEDPLRFYNRIACLGSDLLLPGGKLYFEINQAYGRETAHILEMNQYRDV 261 Query: 248 NAFKDYGGNDRVLLFCR 264 KD G DR++ R Sbjct: 262 RVIKDIFGKDRIVTANR 278 >gi|195118905|ref|XP_002003972.1| GI18199 [Drosophila mojavensis] gi|193914547|gb|EDW13414.1| GI18199 [Drosophila mojavensis] Length = 337 Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 70/245 (28%), Positives = 117/245 (47%), Gaps = 19/245 (7%) Query: 30 LDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFS 89 L D +RF L+H I+G DF ++ L + F PRPETE + Sbjct: 101 LADFERFLEARCARMPLQH-----IIGEWDFMDITLKTAPTVFIPRPETEEFI----RLV 151 Query: 90 LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 + K + V +L++G G+GA+ L++L P ++ S A ++A NA G+ +R Sbjct: 152 IENYRKVEHVNMLEVGCGSGAMSLSMLHALPQVDATAIERSKAATKLAWENAKLLGLHQR 211 Query: 150 FD----TLQSDWFSSVE---GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202 F T+++D + E +D+I+SNPPY+++ L EV ++ +LDGG DG Sbjct: 212 FKVFNHTMETDNYLPTELQDKQYDLIISNPPYVKTEEFQFLHPEVVVYENLNALDGGSDG 271 Query: 203 LSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR---KLFLVNAFKDYGGNDRV 259 L R + + RHL G +E+G + V I + +L V +++D +R Sbjct: 272 LRVARLVFELACRHLRPGGQLWLELGNDHPPLVKTIMNMQYQGRLNFVQSYEDQYKRERF 331 Query: 260 LLFCR 264 + R Sbjct: 332 VQLER 336 >gi|228473463|ref|ZP_04058216.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Capnocytophaga gingivalis ATCC 33624] gi|228275070|gb|EEK13873.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Capnocytophaga gingivalis ATCC 33624] Length = 281 Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 78/251 (31%), Positives = 120/251 (47%), Gaps = 16/251 (6%) Query: 16 GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75 G++ + I+ D + ++ L K+ I I F + L + S PR Sbjct: 35 GMNQVEAILYHDQEIAQEKKMELQRVCQELSKNIPIQYIYQKAHFLGLSLYVDSRVLIPR 94 Query: 76 PETELLVDSALA--FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133 ETE LVD + + P++ RILD+GTG+GA+ +AL K P +DIS A Sbjct: 95 QETEELVDWIVTSYMAAPQL------RILDIGTGSGAIAIALKKHLPQASLTAIDISEGA 148 Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSVEGL---FDVIVSNPPYIESVIVDCLGLEVRDF 190 L +A+ NA +GV+ F LQ D VE L +D+IVSNPPY+ + + V D+ Sbjct: 149 LAVAQQNAKRHGVAITF--LQQDIL-GVEDLGTSYDIIVSNPPYVRELEKKEMHANVLDY 205 Query: 191 DPRISLDGGIDG-LSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249 +P ++L D L Y IA+ +R+L ++G EI + + +K F Sbjct: 206 EPSLALFVPDDNPLLFYEKIAEIAARNLTEEGTLYFEINQYLGQQTLEMLH-KKGFKALL 264 Query: 250 FKDYGGNDRVL 260 KD NDR++ Sbjct: 265 RKDLNDNDRMI 275 >gi|296268874|ref|YP_003651506.1| HemK family modification methylase [Thermobispora bispora DSM 43833] gi|296091661|gb|ADG87613.1| modification methylase, HemK family [Thermobispora bispora DSM 43833] Length = 284 Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 79/259 (30%), Positives = 118/259 (45%), Gaps = 15/259 (5%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ V G+S ++ D D RF+ I R E + I G F + L Sbjct: 26 DAEEIAAFVHGVSRGRLHTVKDEDFD--ARFW--EGIARREAREPLQHITGRAYFRYLSL 81 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR--ILDLGTGTGAVCLALLKESPFFK 123 + F PRPETE++ +++ R+ + DV ++DLGTG+GA+ L++ +E + Sbjct: 82 EVGPGVFVPRPETEVMT----GWAIDRLREMDVASPIVVDLGTGSGAIALSIAQEVALAQ 137 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQ--SDWFSSVEGLFDVIVSNPPYIESVIVD 181 V+I A AK N + +G F + +D + G D+++SNPPYI V Sbjct: 138 VHAVEIDPVAYSWAKKNVLEHGQGRVFLHPEDLADCLPELNGQVDLVISNPPYIPPGEV- 196 Query: 182 CLGLEVRDFDPRISLDG-GIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 EVRD+DP +L G G DGL R + R L G +VE Q V +F Sbjct: 197 PRDPEVRDYDPSRALYGSGEDGLGEIRAVERTARRLLRPGGYVAVEHAECQANAVYWLFA 256 Query: 241 SRKLFL-VNAFKDYGGNDR 258 K + V +D G DR Sbjct: 257 EEKGWRDVRTRQDLTGRDR 275 >gi|117927850|ref|YP_872401.1| HemK family modification methylase [Acidothermus cellulolyticus 11B] gi|117648313|gb|ABK52415.1| modification methylase, HemK family [Acidothermus cellulolyticus 11B] Length = 294 Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 67/220 (30%), Positives = 102/220 (46%), Gaps = 6/220 (2%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101 + R + + + G F + L + F PRPETE+L + R + + Sbjct: 71 VARRAQRVPLQHLTGSVGFRRLELAVGPGVFVPRPETEVL--AGWCIETLRADGPAQPLV 128 Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW---F 158 +DL TG+GA+ L++ +E P + VD A A+ N G++ R L +D Sbjct: 129 VDLCTGSGAIALSIAQEVPAARVFAVDDDPVATAWAQRNVAGTGLAGRVVVLCADAAVAL 188 Query: 159 SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 ++G D++V+NPPY+ L EVRD DP +L DGL+ I + R L Sbjct: 189 PELDGQVDLVVANPPYLAEGDRQLLEPEVRDHDPPRALWSDADGLAGPAMIVEAARRLLR 248 Query: 219 KDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258 G +VE G Q+ VV +F+ R V A +D G DR Sbjct: 249 PGGRVAVEHGDGQRAAVVGLFD-RGWSEVAAHQDLTGRDR 287 >gi|227537350|ref|ZP_03967399.1| possible N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Sphingobacterium spiritivorum ATCC 33300] gi|227242853|gb|EEI92868.1| possible N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Sphingobacterium spiritivorum ATCC 33300] Length = 267 Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 74/256 (28%), Positives = 115/256 (44%), Gaps = 16/256 (6%) Query: 13 RVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTF 72 V G++ Q V D V+ + Q+ L + L+ + I IL DFY ++ Sbjct: 16 EVAGINRMQYTVQNDHVVTEEQKVQLDRILQELLRRKPIQHILKKADFYGEIFEVNEFVL 75 Query: 73 EPRPETELLVDSALAF----SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128 PRPETE LV + ++P ++I+D+GTG+G + + L K P +D Sbjct: 76 IPRPETEELVHLIIGHHRSSAVP-------LKIIDIGTGSGCIPVILKKHVPAAHVSALD 128 Query: 129 ISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185 IS +A+ +AK N F D L+ ++ + E L+D+IVSNPPYI + + Sbjct: 129 ISKEAIAVAKRNTKKMETDIHFVNADILEWEYLFT-EQLYDIIVSNPPYITPKEKEEMHS 187 Query: 186 EVRDFDPRISLDGGIDG-LSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 V +F+P ++L L Y TIA HL G EI + + + Sbjct: 188 NVLEFEPHLALFVEESAPLLFYETIASFALVHLKPAGDLYFEINQYYGPETADMLRKKGF 247 Query: 245 FLVNAFKDYGGNDRVL 260 V KD G DR++ Sbjct: 248 SKVELIKDMHGADRMI 263 >gi|222529062|ref|YP_002572944.1| HemK family modification methylase [Caldicellulosiruptor bescii DSM 6725] gi|222455909|gb|ACM60171.1| modification methylase, HemK family [Caldicellulosiruptor bescii DSM 6725] Length = 288 Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 72/262 (27%), Positives = 123/262 (46%), Gaps = 24/262 (9%) Query: 10 FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69 L ++ + +VI++ ++ + + NAI + L+ + F + L + Sbjct: 37 MLSQILNMEKTEVILNKGLPVEQDKYEKIVNAISKYLQDYPLQYCTNKAFFMGLELYVDE 96 Query: 70 DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF--KGVGV 127 + PR +TE+LV+ A+ + + + LD+GTG+G + +AL K F K V Sbjct: 97 NVLIPRFDTEVLVEVAIEI----FKSKKNLYFLDIGTGSGCIAVALCK---FLDCKVFAV 149 Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCLGL 185 DIS +ALE+A NA NGV R ++S+ F + +D I+SNPPYI Sbjct: 150 DISERALEVASKNAKLNGVENRISFVRSNLFEDIPKNLRYDAIISNPPYISDE------- 202 Query: 186 EVRDFDPR------ISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 E+ + DPR I+L DGL +R IA+ +L G E+G++Q V I Sbjct: 203 EIFELDPRVLKEPHIALFSKEDGLWFFREIANKAKLYLKDGGYIIFEVGFSQAEKVKEIL 262 Query: 240 ESRKLFLVNAFKDYGGNDRVLL 261 + +++ +D +R + Sbjct: 263 KKNGYKNISSRRDLNNVERCIF 284 >gi|302872095|ref|YP_003840731.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Caldicellulosiruptor obsidiansis OB47] gi|302574954|gb|ADL42745.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Caldicellulosiruptor obsidiansis OB47] Length = 288 Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 70/228 (30%), Positives = 111/228 (48%), Gaps = 12/228 (5%) Query: 38 LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97 + NAI + L+ + F + + + PR +TE+LV+ A+ + R Sbjct: 65 IVNAISKYLQDYPLQYCTNKAFFMGLEFYVDENVLIPRFDTEVLVEVAIEI----FKDRK 120 Query: 98 VVRILDLGTGTGAVCLALLKESPFF--KGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155 + LD+GTG+G + +AL K F K + VDIS +ALE+A+ NA NGV R ++S Sbjct: 121 NLYFLDIGTGSGCIAVALCK---FLDCKVLAVDISERALEVARKNAKLNGVENRISFVRS 177 Query: 156 DWFSSVEG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213 + F + FD I+SNPPYI L +V +P I+L +GL ++ IA Sbjct: 178 NLFEDIPKNLRFDAILSNPPYISESERFKLEKQVLK-EPHIALFSKENGLWFFKEIASKA 236 Query: 214 SRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 +L G E+G++Q +V RI E + + KD +R + Sbjct: 237 KLYLKDGGYIIFEVGFSQAEEVKRILEQNGYENIKSRKDLNNIERCIF 284 >gi|50954443|ref|YP_061731.1| methyltransferase [Leifsonia xyli subsp. xyli str. CTCB07] gi|50950925|gb|AAT88626.1| methyltransferase [Leifsonia xyli subsp. xyli str. CTCB07] Length = 292 Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 72/226 (31%), Positives = 101/226 (44%), Gaps = 11/226 (4%) Query: 44 RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAF--SLPRIEKRDVVRI 101 R E + I G F ++ L + F PRPETE + A+ ++P E + Sbjct: 72 RRAAREPVQHITGRAPFRSLELAVGPGVFVPRPETEQVAQFAIDALRAVPSPEPI----V 127 Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN---AVTNGVSERFDTLQSDWF 158 DLGTG+GA+ LAL E P + V+ S +A ++ N A V F L +D Sbjct: 128 ADLGTGSGAIALALATEVPHARVFAVENSPEAFVWSRRNIDAAGAPNVRAVFADL-ADAL 186 Query: 159 SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 ++G DV++SNPPY+ V EVR FDP ++L GG DGL RTI+ R L Sbjct: 187 PDLDGAVDVVISNPPYVPDAAV-PRDPEVRLFDPHVALYGGEDGLDVVRTISRVAWRLLR 245 Query: 219 KDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 G +E G Q V + + +D DR R Sbjct: 246 SGGALVLEHGERQGAAVRDLLTADGWRAAATHRDLTARDRATTATR 291 >gi|218768677|ref|YP_002343189.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Neisseria meningitidis Z2491] gi|18203133|sp|Q9JTA1|Y1912_NEIMA RecName: Full=Uncharacterized adenine-specific methylase NMA1912 gi|121052685|emb|CAM09027.1| conserved hypothetical protein [Neisseria meningitidis Z2491] gi|254669591|emb|CBA03601.1| putative adenine-specific methylase [Neisseria meningitidis alpha153] gi|325142818|gb|EGC65188.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Neisseria meningitidis 961-5945] gi|325198754|gb|ADY94210.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Neisseria meningitidis G2136] Length = 303 Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 54/144 (37%), Positives = 81/144 (56%), Gaps = 2/144 (1%) Query: 91 PRIEKRDVVR-ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 P IE ++V LDL TG+G + + + P + VD+S ALE+A N G+ ER Sbjct: 127 PWIEYDELVHNALDLCTGSGCLAIQMAHHYPDAQIDAVDVSLDALEVAGINVEDYGLEER 186 Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209 + +D F +EG +D+IVSNPPY+++ V+ L E +P ++L G DGL R I Sbjct: 187 IRLIHTDLFEGLEGTYDLIVSNPPYVDAESVELLPEEYL-HEPELALGSGADGLDATRQI 245 Query: 210 ADGVSRHLNKDGLCSVEIGYNQKV 233 ++ LN G+ VEIG+N+ V Sbjct: 246 LLNAAKFLNPKGVLLVEIGHNRDV 269 >gi|298208448|ref|YP_003716627.1| putative protoporphyrinogen oxidase [Croceibacter atlanticus HTCC2559] gi|83848371|gb|EAP86240.1| putative protoporphyrinogen oxidase [Croceibacter atlanticus HTCC2559] Length = 282 Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 79/268 (29%), Positives = 127/268 (47%), Gaps = 22/268 (8%) Query: 4 LRDSHSFLCRVT----GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRD 59 +++ H+F ++ +S ++++PD+V+ T A R E I I+G + Sbjct: 20 VQEIHNFFVLLSEAYLKMSRLDIVMNPDTVVSAAILANFTEAFKRLKVFEPIQYIIGETE 79 Query: 60 FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119 F+++ ++ D PRPETE LV + + + + + +LDL TG+G + ++L S Sbjct: 80 FFDLNFKVTPDVLIPRPETEDLVRWII-----QDQHKTNLDVLDLCTGSGCIAISL---S 131 Query: 120 PFFKGVGV---DISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPP 173 + K V DIS AL IAK NA N + F D L SD S+ +DVIVSNPP Sbjct: 132 KYLKDATVSALDISTSALAIAKENAENNNTNIHFLLKDILASD---SLPQHYDVIVSNPP 188 Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDG-LSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232 Y+ ++ D + V + +P ++L D L Y I HL +G +EI Sbjct: 189 YVRNLEKDLMSNNVLEHEPHLALFVEDDNPLIFYNKIISLSKTHLKPNGTLYLEINEFLG 248 Query: 233 VDVVRIFESRKLFLVNAFKDYGGNDRVL 260 + +S + KD G DR+L Sbjct: 249 EATQALLDSDSFTNIELKKDIFGKDRML 276 >gi|195443344|ref|XP_002069377.1| GK18695 [Drosophila willistoni] gi|194165462|gb|EDW80363.1| GK18695 [Drosophila willistoni] Length = 315 Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 65/208 (31%), Positives = 102/208 (49%), Gaps = 16/208 (7%) Query: 28 SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALA 87 S L D +RF L+H I+G DF ++ L + F PRPETE V Sbjct: 77 SQLSDFERFLEARCARMPLQH-----IIGEWDFMDITLKTAPTVFIPRPETEEFV----R 127 Query: 88 FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147 + + V +L++G G+GA+ L++L PF + ++ S A +A NA G+ Sbjct: 128 LVIENYKNDKQVNMLEVGCGSGAMSLSILHRLPFVDAIAIERSKAATALAWENAKLLGLQ 187 Query: 148 ERFD----TLQSDWFSSVE---GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200 ERF T++ D + E +D+I+SNPPY+++ L EV ++ +LDGG Sbjct: 188 ERFKVYNHTMEEDKYMPDELKDKKYDLIISNPPYVKTEEFQFLHPEVVVYENLNALDGGS 247 Query: 201 DGLSHYRTIADGVSRHLNKDGLCSVEIG 228 DGL R + + R+L G +E+G Sbjct: 248 DGLRVARLVFELACRYLRSGGKLWLELG 275 >gi|325134736|gb|EGC57374.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Neisseria meningitidis M13399] gi|325205626|gb|ADZ01079.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Neisseria meningitidis M04-240196] Length = 303 Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 54/144 (37%), Positives = 81/144 (56%), Gaps = 2/144 (1%) Query: 91 PRIEKRDVVR-ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 P IE ++V LDL TG+G + + + P + VD+S ALE+A N G+ ER Sbjct: 127 PWIEYDELVHNALDLCTGSGCLAIQMAHHYPDAQIDAVDVSLDALEVAGINVEDYGLEER 186 Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209 + +D F +EG +D+IVSNPPY+++ V+ L E +P ++L G DGL R I Sbjct: 187 IRLIHTDLFEGLEGTYDLIVSNPPYVDAESVELLPEEYL-HEPELALGSGADGLDATRQI 245 Query: 210 ADGVSRHLNKDGLCSVEIGYNQKV 233 ++ LN G+ VEIG+N+ V Sbjct: 246 LLNAAKFLNPKGVLLVEIGHNRDV 269 >gi|325128697|gb|EGC51562.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Neisseria meningitidis N1568] Length = 303 Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 54/144 (37%), Positives = 81/144 (56%), Gaps = 2/144 (1%) Query: 91 PRIEKRDVVR-ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 P IE ++V LDL TG+G + + + P + VD+S ALE+A N G+ ER Sbjct: 127 PWIEYDELVHNALDLCTGSGCLAIQMAHHYPDAQIDAVDVSLDALEVAGINVEDYGLEER 186 Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209 + +D F +EG +D+IVSNPPY+++ V+ L E +P ++L G DGL R I Sbjct: 187 IRLIHTDLFEGLEGTYDLIVSNPPYVDAESVELLPEEYL-HEPELALGSGADGLDATRQI 245 Query: 210 ADGVSRHLNKDGLCSVEIGYNQKV 233 ++ LN G+ VEIG+N+ V Sbjct: 246 LLNAAKFLNPKGVLLVEIGHNRDV 269 >gi|237802458|ref|YP_002887652.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Chlamydia trachomatis B/Jali20/OT] gi|231273692|emb|CAX10470.1| peptide release factor-glutamine N5-methyltransferase [Chlamydia trachomatis B/Jali20/OT] Length = 290 Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 69/209 (33%), Positives = 98/209 (46%), Gaps = 6/209 (2%) Query: 54 ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113 I G F V L ++ PR ETE+ V+ + + EK D+ G+G + L Sbjct: 69 IHGKVHFLGVELQVTPQVLIPRQETEIFVEQIIGYLQMHKEK---TTFYDVCCGSGCIGL 125 Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173 A+ K P + DIS +AL IA+SNA +N ++ D L D F DV+V NPP Sbjct: 126 AVRKHCPHVRVTLSDISPEALAIAESNARSNALA--VDFLLGDLFDPFSFPADVLVCNPP 183 Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233 Y+ EVR +P +L GG+ GL Y IA + + L G+ +EIG Q Sbjct: 184 YLSYKEFFESDPEVRCHEPWKALVGGVSGLEFYHRIATHIHKILVSGGVGWLEIGSTQGE 243 Query: 234 DVVRIFESRKLFLVNAFKDYGGNDRVLLF 262 DV +IF ++ + KDY DR Sbjct: 244 DVKQIFHAKGI-RGRVLKDYAQLDRFFFL 271 >gi|154687815|ref|YP_001422976.1| YwkE [Bacillus amyloliquefaciens FZB42] gi|154353666|gb|ABS75745.1| YwkE [Bacillus amyloliquefaciens FZB42] Length = 286 Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 77/248 (31%), Positives = 112/248 (45%), Gaps = 13/248 (5%) Query: 24 VDPDSVLDDRQRFFLTNAIVRSLKHESIHR-------ILGWRDFYNVRLTLSSDTFEPRP 76 +D +L Q + + R +H +H+ I+G FY ++ D PRP Sbjct: 35 MDRSKLLASLQEAVGEDELYRFRRHVEMHKEGIPIQYIIGKEQFYGREFFVNDDVLIPRP 94 Query: 77 ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136 ETE +V L + + + ++D+GTG+GA+ + L E F DIS +AL++ Sbjct: 95 ETEEVVFHLLDRQKRAFSEAERLNVIDIGTGSGAIAVTLALECGHFSVSASDISKEALQV 154 Query: 137 AKSNAVTNGVSERFDTLQSDW---FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPR 193 A+ NA G F LQ D F S D+IVSNPPYI + L VR +P Sbjct: 155 AERNAQNLGADVCF--LQGDLLTPFISSGKKADIIVSNPPYISEEEMADLSDIVRFHEPL 212 Query: 194 ISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF-ESRKLFLVNAFKD 252 +L G DGL Y+ + + + L EIGYNQ V +F S V +D Sbjct: 213 HALTDGGDGLKFYKRFMEELPLVMKDKALVVFEIGYNQGKAVKDLFRHSFPNAEVEVVQD 272 Query: 253 YGGNDRVL 260 G DR + Sbjct: 273 INGKDRTV 280 >gi|161870501|ref|YP_001599673.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Neisseria meningitidis 053442] gi|161596054|gb|ABX73714.1| adenine specific methylase, putative [Neisseria meningitidis 053442] Length = 291 Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 54/144 (37%), Positives = 81/144 (56%), Gaps = 2/144 (1%) Query: 91 PRIEKRDVVR-ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 P IE ++V LDL TG+G + + + P VD+S ALE+A N G+ ER Sbjct: 115 PWIEYDELVHNALDLCTGSGCLAIQMAHHYPDAHIDAVDVSLDALEVAGINVEDYGLEER 174 Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209 + +D F +EG +D+IVSNPPY+++ V+ L E +P+++L G DGL R I Sbjct: 175 IRLIHTDLFEGLEGTYDLIVSNPPYVDAESVELLPEEYL-HEPKLALGSGADGLDATRQI 233 Query: 210 ADGVSRHLNKDGLCSVEIGYNQKV 233 ++ LN G+ VEIG+N+ V Sbjct: 234 LLNAAKFLNPKGVLLVEIGHNRDV 257 >gi|76788736|ref|YP_327822.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Chlamydia trachomatis A/HAR-13] gi|166154245|ref|YP_001654363.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Chlamydia trachomatis 434/Bu] gi|166155120|ref|YP_001653375.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Chlamydia trachomatis L2b/UCH-1/proctitis] gi|237804373|ref|YP_002888527.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Chlamydia trachomatis B/TZ1A828/OT] gi|301335494|ref|ZP_07223738.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Chlamydia trachomatis L2tet1] gi|47558932|gb|AAT35566.1| class 1 release factor N5-glutamine S-adenosyl-L-methionine dependent methyltransferase [Chlamydia trachomatis] gi|76167266|gb|AAX50274.1| peptide release factor-glutamine N5-methyltransferase [Chlamydia trachomatis A/HAR-13] gi|165930233|emb|CAP03718.1| peptide release factor-glutamine N5-methyltransferase [Chlamydia trachomatis 434/Bu] gi|165931108|emb|CAP06672.1| peptide release factor-glutamine N5-methyltransferase [Chlamydia trachomatis L2b/UCH-1/proctitis] gi|231272673|emb|CAX09576.1| peptide release factor-glutamine N5-methyltransferase [Chlamydia trachomatis B/TZ1A828/OT] gi|296435540|gb|ADH17714.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Chlamydia trachomatis G/9768] gi|296437400|gb|ADH19561.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Chlamydia trachomatis G/11074] gi|297139899|gb|ADH96657.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Chlamydia trachomatis G/9301] Length = 290 Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 69/209 (33%), Positives = 98/209 (46%), Gaps = 6/209 (2%) Query: 54 ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113 I G F V L ++ PR ETE+ V+ + + EK D+ G+G + L Sbjct: 69 IHGKVHFLGVELQVTPQVLIPRQETEIFVEQIIGYLQMHKEK---TTFYDVCCGSGCIGL 125 Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173 A+ K P + DIS +AL IA+SNA +N ++ D L D F DV+V NPP Sbjct: 126 AVRKHCPHVRVTLSDISPEALAIAESNARSNALA--VDFLLGDLFDPFSFPADVLVCNPP 183 Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233 Y+ EVR +P +L GG+ GL Y IA + + L G+ +EIG Q Sbjct: 184 YLSYKEFFESDPEVRCHEPWKALVGGVSGLEFYHRIATHIHKILVSGGVGWLEIGSTQGE 243 Query: 234 DVVRIFESRKLFLVNAFKDYGGNDRVLLF 262 DV +IF ++ + KDY DR Sbjct: 244 DVKQIFHAKGI-RGRVLKDYAQLDRFFFL 271 >gi|121635295|ref|YP_975540.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Neisseria meningitidis FAM18] gi|304386871|ref|ZP_07369133.1| protein-(glutamine-N5) methyltransferase [Neisseria meningitidis ATCC 13091] gi|120867001|emb|CAM10764.1| conserved hypothetical protein [Neisseria meningitidis FAM18] gi|254672107|emb|CBA04814.1| putative adenine-specific methylase [Neisseria meningitidis alpha275] gi|261392121|emb|CAX49619.1| putative adenine-specific methylase [Neisseria meningitidis 8013] gi|304339030|gb|EFM05122.1| protein-(glutamine-N5) methyltransferase [Neisseria meningitidis ATCC 13091] gi|325131159|gb|EGC53879.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Neisseria meningitidis OX99.30304] gi|325133019|gb|EGC55693.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Neisseria meningitidis M6190] gi|325138683|gb|EGC61236.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Neisseria meningitidis ES14902] gi|325144902|gb|EGC67188.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Neisseria meningitidis M01-240013] Length = 303 Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 54/144 (37%), Positives = 81/144 (56%), Gaps = 2/144 (1%) Query: 91 PRIEKRDVVR-ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 P IE ++V LDL TG+G + + + P + VD+S ALE+A N G+ ER Sbjct: 127 PWIEYDELVHNALDLCTGSGCLAIQMAHHYPDAQIDAVDVSLDALEVAGINVEDYGLEER 186 Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209 + +D F +EG +D+IVSNPPY+++ V+ L E +P ++L G DGL R I Sbjct: 187 IRLIHTDLFEGLEGTYDLIVSNPPYVDAESVELLPEEYL-HEPELALGSGADGLDATRQI 245 Query: 210 ADGVSRHLNKDGLCSVEIGYNQKV 233 ++ LN G+ VEIG+N+ V Sbjct: 246 LLNAAKFLNPKGVLLVEIGHNRDV 269 >gi|302333763|gb|ADL23956.1| modification methylase HemK family protein [Staphylococcus aureus subsp. aureus JKD6159] Length = 278 Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 69/229 (30%), Positives = 114/229 (49%), Gaps = 18/229 (7%) Query: 41 AIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR 100 A+ R L E I I+G+ FY ++S+ PRPETE + L ++E D Sbjct: 59 ALQRMLLGEPIQYIVGFASFYGRTFDVNSNCLIPRPETE----EVMLHFLQQLE--DDAT 112 Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 I+D+GTG+G + + L E P + DIS +A+ IA++NA + +F L D Sbjct: 113 IVDIGTGSGVLAITLKCEKPDLNVIATDISLEAMNIARNNAEKHQSQIQF--LTGDALKP 170 Query: 161 V--EGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217 + EG+ + ++SNPPYI+ + + V F+P +L G + Y +I + + + Sbjct: 171 LIKEGIKLNGLISNPPYIDEKDMVTMSPTVTRFEPHQALFADNHGYAIYESIIEDLPHVM 230 Query: 218 NKDGLCSVEIGYNQ----KVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262 K EIGYNQ K ++ F +K ++ +D G+DR++ F Sbjct: 231 EKGSPVVFEIGYNQGEALKSIILNKFPDKK---IDIIQDINGHDRIVSF 276 >gi|15677504|ref|NP_274660.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Neisseria meningitidis MC58] gi|18203146|sp|Q9JYC0|Y1655_NEIMB RecName: Full=Uncharacterized adenine-specific methylase NMB1655 gi|7226907|gb|AAF42004.1| putative adenine specific methylase [Neisseria meningitidis MC58] gi|308389776|gb|ADO32096.1| hypothetical protein NMBB_1897 [Neisseria meningitidis alpha710] gi|316985002|gb|EFV63956.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Neisseria meningitidis H44/76] gi|319410908|emb|CBY91303.1| putative adenine-specific methylase [Neisseria meningitidis WUE 2594] gi|325136695|gb|EGC59295.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Neisseria meningitidis M0579] gi|325140791|gb|EGC63302.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Neisseria meningitidis CU385] gi|325199751|gb|ADY95206.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Neisseria meningitidis H44/76] gi|325201686|gb|ADY97140.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Neisseria meningitidis M01-240149] gi|325204616|gb|ADZ00070.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Neisseria meningitidis M01-240355] gi|325208578|gb|ADZ04030.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Neisseria meningitidis NZ-05/33] Length = 303 Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 54/144 (37%), Positives = 81/144 (56%), Gaps = 2/144 (1%) Query: 91 PRIEKRDVVR-ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 P IE ++V LDL TG+G + + + P + VD+S ALE+A N G+ ER Sbjct: 127 PWIEYDELVHNALDLCTGSGCLAIQMAHHYPDAQIDAVDVSLDALEVAGINVEDYGLEER 186 Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209 + +D F +EG +D+IVSNPPY+++ V+ L E +P ++L G DGL R I Sbjct: 187 IRLIHTDLFEGLEGTYDLIVSNPPYVDAESVELLPEEYL-HEPELALGSGADGLDATRQI 245 Query: 210 ADGVSRHLNKDGLCSVEIGYNQKV 233 ++ LN G+ VEIG+N+ V Sbjct: 246 LLNAAKFLNPKGVLLVEIGHNRDV 269 >gi|302554165|ref|ZP_07306507.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Streptomyces viridochromogenes DSM 40736] gi|302471783|gb|EFL34876.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Streptomyces viridochromogenes DSM 40736] Length = 281 Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 66/204 (32%), Positives = 98/204 (48%), Gaps = 7/204 (3%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR- 100 I R E + I G F + L + F PRPETE S + +++ + DVV Sbjct: 58 IARREAREPLQHITGRAYFRYLELQVGPGVFVPRPETE----SVVGWAIDAVRAMDVVEP 113 Query: 101 -ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 I+DL TG+GA+ LAL +E P + V++S AL+ + N + V R + F Sbjct: 114 CIVDLCTGSGAIALALAQEVPRSRVHAVELSEDALQWTRKNVEGSRVELRQGNALTA-FP 172 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 ++G D+++SNPPYI + + E RD+DP ++L G DGL R + R L Sbjct: 173 DLDGQVDLVISNPPYIPLTEWEYVAPEARDYDPDMALFSGEDGLDLIRGLERTAHRLLRP 232 Query: 220 DGLCSVEIGYNQKVDVVRIFESRK 243 G+ VE Q V IF + Sbjct: 233 GGVVVVEHADTQGGQVPWIFTEER 256 >gi|82702975|ref|YP_412541.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Nitrosospira multiformis ATCC 25196] gi|82411040|gb|ABB75149.1| [LSU ribosomal protein L3P]-glutamine N5-methyltransferase [Nitrosospira multiformis ATCC 25196] Length = 302 Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 55/143 (38%), Positives = 81/143 (56%), Gaps = 6/143 (4%) Query: 94 EKRDVVRILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVSERFD 151 E +V LDL TG+G CLA+L F DIS AL++A+ N G+ +R D Sbjct: 127 EPAEVYSALDLCTGSG--CLAILLAHAFPNAAIDATDISANALQVAEKNVEEYGLEDRID 184 Query: 152 TLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210 +QSD F+++ + +D+IVSNPPY+ + + L E R +P+ +L G DGL + I Sbjct: 185 LIQSDLFAALADRRYDLIVSNPPYVNAEAMAALPEEYR-HEPQSALASGEDGLKATKVIL 243 Query: 211 DGVSRHLNKDGLCSVEIGYNQKV 233 + HL DGL VEIG+N++ Sbjct: 244 RDAANHLTADGLLIVEIGHNREA 266 >gi|312877229|ref|ZP_07737198.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Caldicellulosiruptor lactoaceticus 6A] gi|311796038|gb|EFR12398.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Caldicellulosiruptor lactoaceticus 6A] Length = 288 Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 71/239 (29%), Positives = 117/239 (48%), Gaps = 24/239 (10%) Query: 13 RVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTF 72 ++ G+ +VI++ + + + NAI R L+ + F + + Sbjct: 40 QILGIDKAEVILNKGLPVRQDKYEKIVNAISRYLQGYPLQYCTNKAFFMGFEFYVDENVL 99 Query: 73 EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF--KGVGVDIS 130 PR +TE+LV+ A+ + R + LD+GTG+G + +AL K F + VDIS Sbjct: 100 IPRFDTEVLVEVAIEI----FKGRKNLYFLDIGTGSGCIAVALCK---FLDCNVLAVDIS 152 Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGL-FDVIVSNPPYIESVIVDCLGLEVR 188 +ALE+A+ NA NGV + ++S+ F ++ + L FD I+SNPPYI E+ Sbjct: 153 ERALEVARKNAKLNGVENKILFIRSNLFENIPQNLKFDAILSNPPYISKD-------EIF 205 Query: 189 DFDPR------ISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 + DPR I+L DG ++ IA+ +L G E+G++Q +V RI E Sbjct: 206 ELDPRVLKEPHIALFSEEDGFWFFKEIANKAKLYLKDSGYIIFEVGFSQAKEVKRILEQ 264 >gi|312127876|ref|YP_003992750.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Caldicellulosiruptor hydrothermalis 108] gi|311777895|gb|ADQ07381.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Caldicellulosiruptor hydrothermalis 108] Length = 288 Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 70/228 (30%), Positives = 111/228 (48%), Gaps = 12/228 (5%) Query: 38 LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97 + NAI + L+ + F + + + PR +TE+LV+ A+ + R Sbjct: 65 IVNAISKYLQDYPLQYCTNKAFFMGLEFYVDENVLIPRFDTEVLVEVAIEI----FKGRK 120 Query: 98 VVRILDLGTGTGAVCLALLKESPFF--KGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155 + LD+GTG+G + +AL K F K + VDIS +ALE+A+ NA NGV R ++S Sbjct: 121 NLYFLDIGTGSGCIAVALCK---FLDCKVLAVDISERALEVARKNAKLNGVENRISFVRS 177 Query: 156 DWFSSVEG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213 + F + D I+SNPPYI L +V +P I+L DGL ++ IA+ Sbjct: 178 NLFEDIPKNLRLDAILSNPPYISESERFKLEKQVLK-EPHIALFSKEDGLWFFKEIANKA 236 Query: 214 SRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 +L G E+G++Q +V RI E + + KD +R + Sbjct: 237 KLYLKDGGYIIFEVGFSQAEEVKRILEQNGYENIKSRKDLNNIERCIF 284 >gi|312869610|ref|ZP_07729761.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Lactobacillus oris PB013-T2-3] gi|311094896|gb|EFQ53189.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Lactobacillus oris PB013-T2-3] Length = 289 Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 63/206 (30%), Positives = 100/206 (48%), Gaps = 7/206 (3%) Query: 37 FLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR 96 + A+ + L H I+G FY + ++ P ET LVD L S P + Sbjct: 59 WFRTAVDQLLNHVPAQYIVGQTTFYGRQFKVTPAVLVPEAETAELVDWVLT-SQPADHQ- 116 Query: 97 DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 +R+LDLGTG+G + + L E P + DIS AL +A+ N + +S ++SD Sbjct: 117 --LRVLDLGTGSGVIGITLALERPRWSVTLSDISSAALAVARENVRQHQLS--LPLVESD 172 Query: 157 WFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215 F+++ G +D+IV+NPPYI+ + V D +P I+L GL YR + + Sbjct: 173 LFANLAGQRYDLIVTNPPYIDPADTAVMDQAVLDHEPPIALFADEHGLGFYRRLFELAGN 232 Query: 216 HLNKDGLCSVEIGYNQKVDVVRIFES 241 HL G E GY+Q+ + + + Sbjct: 233 HLRPGGQLFGETGYDQEKSIQALLKQ 258 >gi|15827566|ref|NP_301829.1| protoporphyrinogen oxidase [Mycobacterium leprae TN] gi|221230043|ref|YP_002503459.1| putative protoporphyrinogen oxidase [Mycobacterium leprae Br4923] gi|13432147|sp|P45832|HEMK_MYCLE RecName: Full=Protein methyltransferase hemK homolog; AltName: Full=M.MleHemKP gi|13093116|emb|CAC31516.1| possible protoporphyrinogen oxidase [Mycobacterium leprae] gi|219933150|emb|CAR71230.1| possible protoporphyrinogen oxidase [Mycobacterium leprae Br4923] Length = 288 Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 72/231 (31%), Positives = 111/231 (48%), Gaps = 11/231 (4%) Query: 34 QRFF--LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLP 91 + FF ++A+ + + ++G F V L + D F PRPETE ++ +A LP Sbjct: 51 EEFFRRYSDAVAARSRRVPLQHLIGTVSFGPVVLHVGPDVFIPRPETEAILAWVMAQRLP 110 Query: 92 RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS-ERF 150 +R V I+D TG+GA+ +AL P + +G+D S AL+ A+ NA V R Sbjct: 111 ---ERPV--IVDACTGSGALAVALAHHRPAARVIGIDDSDSALDYARRNAEGTAVECVRA 165 Query: 151 DTLQSDWFSSVEGLFDVIVSNPPYI--ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208 D ++G D+ V+NPPY+ + V+ L EV +DPR ++ GG DG++ Sbjct: 166 DVTTPALLPELDGCVDLFVANPPYVPDDPVVQSILEPEVTQYDPRHAVFGGPDGMALTAD 225 Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF-LVNAFKDYGGNDR 258 I R L GL +VE + V + + LF V +D G R Sbjct: 226 IVGLAGRWLRPGGLFAVEHDDSTSVPTLDLVYRTDLFDDVLTHRDLAGRPR 276 >gi|268319748|ref|YP_003293404.1| methyltransferase, HemK family [Lactobacillus johnsonii FI9785] gi|262398123|emb|CAX67137.1| methyltransferase, HemK family [Lactobacillus johnsonii FI9785] Length = 280 Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 66/197 (33%), Positives = 104/197 (52%), Gaps = 14/197 (7%) Query: 50 SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109 S ILG+ FY ++ ++ PR ETE LV ++L IE +ILDLGTG+G Sbjct: 67 SPQYILGYAWFYGYKILVNRGVLIPRFETEELV----KWALENIESGK--KILDLGTGSG 120 Query: 110 AVCLALLKESPF-----FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL 164 A+ +AL+K++ F DI+ AL ++ N + + + T +++ +E Sbjct: 121 AIMVALVKQAQKQGIQNFNLYASDITDSALRESEENFLKYDLDVK--TRKANVLVGLEK- 177 Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224 FD+I+SNPPYI+ + + V +P +L GG DGL YR A V HLN G Sbjct: 178 FDMIISNPPYIKMSEKNLMDKNVIKNEPDTALYGGEDGLDFYRKFAKQVQSHLNPQGQFF 237 Query: 225 VEIGYNQKVDVVRIFES 241 +E G+++K + +FE+ Sbjct: 238 LEFGFSEKEQLKELFET 254 >gi|222152014|ref|YP_002561174.1| hypothetical protein MCCL_1771 [Macrococcus caseolyticus JCSC5402] gi|222121143|dbj|BAH18478.1| conserved hypothetical protein [Macrococcus caseolyticus JCSC5402] Length = 279 Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 72/225 (32%), Positives = 107/225 (47%), Gaps = 14/225 (6%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101 I R ++HE + I G++ FY + + PRPETE LV A +L + DVV Sbjct: 62 IARLVRHEPLAHITGFQMFYERKFMVDERVLVPRPETEELV----ALALAHVSHSDVVA- 116 Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 D+GTG+GA+ + ES DIS +AL++A N + + + D + Sbjct: 117 -DIGTGSGAIAATVQLESG-CTMYASDISREALQVALHNIAL--LDAQVTCFEGDLLRPI 172 Query: 162 --EGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 G+ D ++SNPPYI V + L FDP ++L GL Y+ + + +N Sbjct: 173 IERGIKLDALLSNPPYISRDEVTEMNLTAL-FDPELALFAEDAGLVLYKRMIQSLPEVMN 231 Query: 219 KDGLCSVEIGYNQKVDVVR-IFESRKLFLVNAFKDYGGNDRVLLF 262 + + EIG+ Q + + I E VN KD GNDRVL F Sbjct: 232 QGAFIAFEIGHRQAEALTQYIHEHFSHLRVNIHKDMNGNDRVLWF 276 >gi|311898377|dbj|BAJ30785.1| putative protein methyltransferase HemK [Kitasatospora setae KM-6054] Length = 288 Score = 92.8 bits (229), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 72/242 (29%), Positives = 106/242 (43%), Gaps = 16/242 (6%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ V G+ Q+ PD D R A+ R + E + I G F + L Sbjct: 26 DAEELAAHVHGVKRSQLHTVPDGDFDAR----YWEAVSRREQREPLQHITGRAFFRYLEL 81 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR--ILDLGTGTGAVCLALLKESPFFK 123 + F PRPETE +V+ +++ + DV ++DL TG+GA+ LAL +E P Sbjct: 82 EVGPGVFVPRPETESVVE----WAIDAVRAMDVAEPLVVDLCTGSGAIALALAQELPRST 137 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV------EGLFDVIVSNPPYIES 177 ++ AL + N + R Q D + +G FD+++SNPPYI Sbjct: 138 VHAFELDEGALAYTRRNVEASPDRARVHLHQGDATQAFADDRGWDGRFDLVISNPPYIPL 197 Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237 + + E RD DP++SL G DGL R I +R L G +E Q V Sbjct: 198 TEWEYVAPEARDHDPQMSLFSGEDGLDTIRGIERVAARLLRPGGAVVIEHADTQGGQVPW 257 Query: 238 IF 239 IF Sbjct: 258 IF 259 >gi|229545077|ref|ZP_04433802.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Enterococcus faecalis TX1322] gi|307287618|ref|ZP_07567661.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis TX0109] gi|229309969|gb|EEN75956.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Enterococcus faecalis TX1322] gi|306501356|gb|EFM70659.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis TX0109] gi|315165015|gb|EFU09032.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis TX1302] Length = 277 Score = 92.8 bits (229), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 62/212 (29%), Positives = 103/212 (48%), Gaps = 17/212 (8%) Query: 54 ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113 +LG +FY ++ T PRPETE LV+ L + + ++D+GTGTG + + Sbjct: 73 LLGQAEFYGHSFIVNEHTLIPRPETEELVERCL-----KANPDTPLTVVDVGTGTGVIAI 127 Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVS 170 +L P ++ + +D+S +AL +AK NA G F + LQ + D+++S Sbjct: 128 SLKLARPNWRVIAIDLSEEALTVAKQNAKVLGADIEFYHGNGLQPVASEKI----DLLIS 183 Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230 NPPYI + VR ++P+ +L +GL+ Y+ + L DG EIG+ Sbjct: 184 NPPYISEQEWHLMDASVRTYEPKTALFAENNGLALYQQLIHESQTMLKADGKIYFEIGFQ 243 Query: 231 QKVDVVRIFES---RKLFLVNAFKDYGGNDRV 259 Q + + + +K + KD GNDR+ Sbjct: 244 QGAALQELLSAAYPQKTIKIE--KDLSGNDRL 273 >gi|255020677|ref|ZP_05292739.1| protoporphyrinogen oxidase [Acidithiobacillus caldus ATCC 51756] gi|254969913|gb|EET27413.1| protoporphyrinogen oxidase [Acidithiobacillus caldus ATCC 51756] Length = 290 Score = 92.8 bits (229), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 69/218 (31%), Positives = 103/218 (47%), Gaps = 11/218 (5%) Query: 44 RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103 R L E + LG F + L +S PR +TE+LV +AL R+ ++LD Sbjct: 69 RRLSGEPLAYCLGTAPFLDFELAVSPAVLIPRADTEVLVQAALE----RMPLYGRQKVLD 124 Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG 163 LGTG+GA+ LAL + P + GVD+S AL +A++NA G+ D Q W ++ Sbjct: 125 LGTGSGAIALALARSRPTAEITGVDLSSDALALARANAKALGLV--VDWQQGHWCRALAP 182 Query: 164 --LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221 FD+IVSNPPY+ + D L +P ++L G G + I + V LN Sbjct: 183 GQRFDLIVSNPPYLAA---DDPHLAELQHEPALALVAGPTGYEAFTEILEAVRDRLNPGA 239 Query: 222 LCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRV 259 E G++Q + + V +D G +RV Sbjct: 240 WLLFEHGWDQGPALRERLTASGFRAVFGQRDGAGRERV 277 >gi|302680659|ref|XP_003030011.1| hypothetical protein SCHCODRAFT_57204 [Schizophyllum commune H4-8] gi|300103702|gb|EFI95108.1| hypothetical protein SCHCODRAFT_57204 [Schizophyllum commune H4-8] Length = 292 Score = 92.8 bits (229), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 73/242 (30%), Positives = 113/242 (46%), Gaps = 20/242 (8%) Query: 38 LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97 L N + R + E + ILG + F ++ +T+ PRPETE ++ +R Sbjct: 40 LQNLLARRVAGEPLQYILGSQPFGDLEITVRPPVLIPRPETEDWTIRLSELLARKVRRRA 99 Query: 98 VVRILDLGTGTGAVCLALLKESP--FFKGVGVDISCKALEIAKSN-------AVTNGVSE 148 + + DLGTGTG + L L P + G D+S A+ +A N AV +G+ Sbjct: 100 PITLFDLGTGTGCIPLLLCHLLPQGTIRAHGFDLSPDAVALANENAKTSNIPAVASGLVN 159 Query: 149 RFDTLQSDWFS------SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201 F +D+ S + L DV+ SNPPYI + + L EV+D++ +L G Sbjct: 160 TFSATLADFASARFRADTAHALPCDVLTSNPPYIST--SEPLPAEVKDWEDSRALFAGES 217 Query: 202 GLSHYRTIADGVSRH--LNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRV 259 GL Y I ++ L DGL ++EIG+ Q V I S L + ++D G DR Sbjct: 218 GLQCYEAIGKLLASPGFLAPDGLVALEIGHTQAQPVRDILASAGLREIEIWQDPWGKDRT 277 Query: 260 LL 261 ++ Sbjct: 278 VV 279 >gi|325981112|ref|YP_004293514.1| protein-(glutamine-N5) methyltransferase, 50S ribosomal protein L3-specific [Nitrosomonas sp. AL212] gi|325530631|gb|ADZ25352.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Nitrosomonas sp. AL212] Length = 298 Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 54/139 (38%), Positives = 79/139 (56%), Gaps = 6/139 (4%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVSERFDTLQS 155 V LDL TG+G CLA+L F VDIS +AL +A N G+ ER ++S Sbjct: 131 VATTLDLCTGSG--CLAILMAHSFPNAALDAVDISAQALAVAHKNIQDYGLQERITLIES 188 Query: 156 DWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214 + FS++ E +D+I+SNPPY+ + + L E R ++P +L G DGL R I + Sbjct: 189 NLFSALQEKRYDLIISNPPYVNAASMAQLPQEYR-YEPENALASGTDGLDATRQILQHAA 247 Query: 215 RHLNKDGLCSVEIGYNQKV 233 R+L DG+ VEIG+N++ Sbjct: 248 RYLTDDGILVVEIGHNREA 266 >gi|317164621|gb|ADV08162.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Neisseria gonorrhoeae TCDC-NG08107] Length = 299 Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 54/144 (37%), Positives = 80/144 (55%), Gaps = 2/144 (1%) Query: 91 PRIEKRDVVR-ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 P IE ++V LDL TG+G + + + P + VD+S ALE+A N G+ ER Sbjct: 123 PWIEYDELVHNALDLCTGSGCLAIQMAHHYPDAQIDAVDVSLDALEVAGINIEDYGLEER 182 Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209 + +D F +EG +D+IVSNPPY+++ V L E +P ++L G DGL R I Sbjct: 183 IQLIHTDLFEGLEGTYDLIVSNPPYVDAESVGALPEEYL-HEPELALGSGADGLDATRQI 241 Query: 210 ADGVSRHLNKDGLCSVEIGYNQKV 233 ++ LN G+ VEIG+N+ V Sbjct: 242 LLNAAKFLNPKGVLLVEIGHNRDV 265 >gi|15604742|ref|NP_219526.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Chlamydia trachomatis D/UW-3/CX] gi|255310825|ref|ZP_05353395.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Chlamydia trachomatis 6276] gi|255317125|ref|ZP_05358371.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Chlamydia trachomatis 6276s] gi|3328414|gb|AAC67614.1| N6-adenine-specific DNA methylase [Chlamydia trachomatis D/UW-3/CX] gi|297748155|gb|ADI50701.1| Peptide release factor-glutamine N5-methyltransferase [Chlamydia trachomatis D-EC] gi|297749035|gb|ADI51713.1| Peptide release factor-glutamine N5-methyltransferase [Chlamydia trachomatis D-LC] Length = 290 Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 68/209 (32%), Positives = 98/209 (46%), Gaps = 6/209 (2%) Query: 54 ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113 I G F V L ++ PR ETE+ V+ + + EK D+ G+G + L Sbjct: 69 IHGKVHFLGVELQVTPQVLIPRQETEIFVEQIIGYLQMHKEK---TTFYDVCCGSGCIGL 125 Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173 A+ K P + DIS +AL IA+SNA +N ++ D L D F DV+V NPP Sbjct: 126 AVRKHCPHVRVTLSDISPEALAIAESNARSNALA--VDFLLGDLFDPFSFPADVLVCNPP 183 Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233 Y+ EVR +P +L GG+ GL Y IA + + L G+ +EIG Q Sbjct: 184 YLSYKEFFESDPEVRCHEPWKALVGGVSGLEFYHRIATHIHKILVSGGVGWLEIGSTQGE 243 Query: 234 DVVRIFESRKLFLVNAFKDYGGNDRVLLF 262 D+ +IF ++ + KDY DR Sbjct: 244 DIKQIFHAKGI-RGRVLKDYAQLDRFFFL 271 >gi|59801654|ref|YP_208366.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Neisseria gonorrhoeae FA 1090] gi|194099064|ref|YP_002002145.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Neisseria gonorrhoeae NCCP11945] gi|239999365|ref|ZP_04719289.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Neisseria gonorrhoeae 35/02] gi|240014548|ref|ZP_04721461.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Neisseria gonorrhoeae DGI18] gi|240016993|ref|ZP_04723533.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Neisseria gonorrhoeae FA6140] gi|240081435|ref|ZP_04725978.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Neisseria gonorrhoeae FA19] gi|240113630|ref|ZP_04728120.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Neisseria gonorrhoeae MS11] gi|240118353|ref|ZP_04732415.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Neisseria gonorrhoeae PID1] gi|240121070|ref|ZP_04734032.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Neisseria gonorrhoeae PID24-1] gi|240123900|ref|ZP_04736856.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Neisseria gonorrhoeae PID332] gi|240126100|ref|ZP_04738986.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Neisseria gonorrhoeae SK-92-679] gi|254494094|ref|ZP_05107265.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Neisseria gonorrhoeae 1291] gi|268595187|ref|ZP_06129354.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Neisseria gonorrhoeae 35/02] gi|268597536|ref|ZP_06131703.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Neisseria gonorrhoeae FA19] gi|268599691|ref|ZP_06133858.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Neisseria gonorrhoeae MS11] gi|268604066|ref|ZP_06138233.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Neisseria gonorrhoeae PID1] gi|268682525|ref|ZP_06149387.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Neisseria gonorrhoeae PID332] gi|268684689|ref|ZP_06151551.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Neisseria gonorrhoeae SK-92-679] gi|293398711|ref|ZP_06642887.1| protein-(glutamine-N5) methyltransferase, 50S ribosomal protein L3-specific [Neisseria gonorrhoeae F62] gi|59718549|gb|AAW89954.1| conserved hypothetical protein [Neisseria gonorrhoeae FA 1090] gi|193934354|gb|ACF30178.1| Hypothetical protein NGK_1520 [Neisseria gonorrhoeae NCCP11945] gi|226513134|gb|EEH62479.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Neisseria gonorrhoeae 1291] gi|268548576|gb|EEZ43994.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Neisseria gonorrhoeae 35/02] gi|268551324|gb|EEZ46343.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Neisseria gonorrhoeae FA19] gi|268583822|gb|EEZ48498.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Neisseria gonorrhoeae MS11] gi|268588197|gb|EEZ52873.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Neisseria gonorrhoeae PID1] gi|268622809|gb|EEZ55209.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Neisseria gonorrhoeae PID332] gi|268624973|gb|EEZ57373.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Neisseria gonorrhoeae SK-92-679] gi|291610851|gb|EFF39950.1| protein-(glutamine-N5) methyltransferase, 50S ribosomal protein L3-specific [Neisseria gonorrhoeae F62] Length = 303 Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 54/144 (37%), Positives = 80/144 (55%), Gaps = 2/144 (1%) Query: 91 PRIEKRDVVR-ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 P IE ++V LDL TG+G + + + P + VD+S ALE+A N G+ ER Sbjct: 127 PWIEYDELVHNALDLCTGSGCLAIQMAHHYPDAQIDAVDVSLDALEVAGINIEDYGLEER 186 Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209 + +D F +EG +D+IVSNPPY+++ V L E +P ++L G DGL R I Sbjct: 187 IQLIHTDLFEGLEGTYDLIVSNPPYVDAESVGALPEEYL-HEPELALGSGADGLDATRQI 245 Query: 210 ADGVSRHLNKDGLCSVEIGYNQKV 233 ++ LN G+ VEIG+N+ V Sbjct: 246 LLNAAKFLNPKGVLLVEIGHNRDV 269 >gi|148260024|ref|YP_001234151.1| HemK family modification methylase [Acidiphilium cryptum JF-5] gi|146401705|gb|ABQ30232.1| modification methylase, HemK family [Acidiphilium cryptum JF-5] Length = 280 Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 71/178 (39%), Positives = 101/178 (56%), Gaps = 3/178 (1%) Query: 54 ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113 I G + F+++ L +S T PRP+TE L+++AL R ++R + ILDLGTGTGA+ L Sbjct: 69 ITGAKGFWSLDLAVSPATLIPRPDTETLIEAALRH---RPDRRKIRTILDLGTGTGALLL 125 Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173 A L E P G+G+D A +A++NA G++ R DW ++ FD+I++NPP Sbjct: 126 AALAEYPDAFGIGIDRVPAACALARANAARTGLAARAAFCCGDWADALAARFDLILANPP 185 Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231 YI S + L EV +P +LDGG DG YR I + R L GL +E G Q Sbjct: 186 YIPSADIPGLMAEVAAHEPASALDGGADGFDAYRRIVADLPRLLAPGGLAILEAGIGQ 243 >gi|15834913|ref|NP_296672.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Chlamydia muridarum Nigg] gi|270285083|ref|ZP_06194477.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Chlamydia muridarum Nigg] gi|270289106|ref|ZP_06195408.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Chlamydia muridarum Weiss] gi|301336479|ref|ZP_07224681.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Chlamydia muridarum MopnTet14] gi|8163189|gb|AAF73543.1| modification methylase, HemK family [Chlamydia muridarum Nigg] Length = 290 Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 68/209 (32%), Positives = 97/209 (46%), Gaps = 6/209 (2%) Query: 54 ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113 I G F + L +S + PR ETE+ V+ + + EK+ D+ G+G + L Sbjct: 69 IHGKVHFLGIELQVSPEVLIPRQETEIFVEKIIGYLQTHKEKKI---FYDVCCGSGCIGL 125 Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173 ++ K P V DI +AL +AKSNA N + D L D F D V NPP Sbjct: 126 SVKKHCPHVHVVLSDICSQALAVAKSNAKRNDLI--VDFLCGDLFEPFRIPADAFVCNPP 183 Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233 Y+ + EVR +P +L GG+ GL Y IA+ + + L G+ +EIG NQ Sbjct: 184 YLSYKEFFKVDPEVRCHEPWKALVGGVSGLEFYHRIAEHIHKILVPGGVGWLEIGSNQGE 243 Query: 234 DVVRIFESRKLFLVNAFKDYGGNDRVLLF 262 V +IF + + FKDY DR Sbjct: 244 SVKKIFRDKGISGC-VFKDYAQLDRFFFL 271 >gi|317405182|gb|EFV85523.1| adenine-specific methylase [Achromobacter xylosoxidans C54] Length = 298 Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 68/196 (34%), Positives = 106/196 (54%), Gaps = 16/196 (8%) Query: 74 PRPETELLVDSALAFSLPRIEKRDVV-RILDLGTGTGAVCLALLKES--PFFKGVGVDIS 130 PR L+D L+ P ++ V +LD+ TG+G CLA+L P+ + VD+S Sbjct: 109 PRSPIAELLDEGLS---PWVQDAQAVDSVLDMCTGSG--CLAILSALAFPYAQVDAVDVS 163 Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRD 189 ALE+A+ N G+++R QSD F S+ E +DVIV NPPY+ S +D L E R Sbjct: 164 PDALEVARRNVDDYGLADRLALHQSDLFDSLPERQYDVIVCNPPYVNSGSMDVLPQEYR- 222 Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249 +P+++L GG DG+ R I R+L+++G+ +EIG+ + FE+ L Sbjct: 223 HEPQLALAGGADGMDLVRRILQAAPRYLSENGVLVLEIGHERD-----FFEAAFPELSPV 277 Query: 250 FKDY-GGNDRVLLFCR 264 + D +D++LL R Sbjct: 278 WLDTEQASDQLLLLTR 293 >gi|169351466|ref|ZP_02868404.1| hypothetical protein CLOSPI_02246 [Clostridium spiroforme DSM 1552] gi|169291688|gb|EDS73821.1| hypothetical protein CLOSPI_02246 [Clostridium spiroforme DSM 1552] Length = 285 Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 72/223 (32%), Positives = 112/223 (50%), Gaps = 18/223 (8%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110 I I G F+ ++ + PR ETE LV++ L + + D+GTG+GA Sbjct: 69 IQYIKGVETFFGRDFKVNENVLIPRYETEELVENILYRIDDYFSGYKNITLCDVGTGSGA 128 Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGL-FDV 167 + ++L E P K DIS AL +AK NA N + + L D + + L D+ Sbjct: 129 IAISLALEEPKLKVYATDISDLALTVAKENA--NNLKADVEFLVGDMLQPLIEKNLKVDI 186 Query: 168 IVSNPPYI-ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE 226 VSNPPYI + ++ + V+D +P ++L GG DGL YR I + V+ LN+ L + E Sbjct: 187 FVSNPPYIPQEQEIEAV---VKDNEPHVALFGGNDGLYFYRKIFERVNELLNERALLAFE 243 Query: 227 IGYNQKVDVVRIFES--RKLFLVNAF---KDYGGNDRVLLFCR 264 +G++Q+ + E +K F + + KD G DR+L R Sbjct: 244 MGFDQR----ELMEEALQKYFPNDPYEIIKDINGKDRMLFIYR 282 >gi|284031474|ref|YP_003381405.1| modification methylase, HemK family [Kribbella flavida DSM 17836] gi|283810767|gb|ADB32606.1| modification methylase, HemK family [Kribbella flavida DSM 17836] Length = 262 Score = 92.4 bits (228), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 66/220 (30%), Positives = 102/220 (46%), Gaps = 9/220 (4%) Query: 28 SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALA 87 + DDRQ L + + + + ++GW +F +R+ L +D F PR TE LVD A+A Sbjct: 31 TATDDRQ---LAEMVEQRVAGRPLEHVVGWAEFRGLRVALDADVFVPRRRTEHLVDEAIA 87 Query: 88 FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147 P ++DL G+GA+ LAL P + D+ A++ A+ N G Sbjct: 88 RCRPG------AVVVDLCCGSGALGLALASAVPGTELSATDVHPAAVQNARRNLAPIGGQ 141 Query: 148 ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207 L + +++ G D++++N PY+ S V L E R +P ++LDGG DGL R Sbjct: 142 VFEGDLYARLPTTLRGRVDLLLANVPYVPSDQVRLLPAEARLHEPLVTLDGGSDGLDLLR 201 Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLV 247 +A S L GL E Q + +F L V Sbjct: 202 RVAAEASDWLVPGGLVVTETSNEQAAIAIDVFRRHGLSAV 241 >gi|328885060|emb|CCA58299.1| Methylase of polypeptide chain release factors [Streptomyces venezuelae ATCC 10712] Length = 281 Score = 92.4 bits (228), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 68/208 (32%), Positives = 102/208 (49%), Gaps = 11/208 (5%) Query: 35 RFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIE 94 R++ T + R E + I G F + L + F PRPETE S + +++ + Sbjct: 53 RYWET--VARREAREPLQHITGRAFFRYLELQVGPGVFVPRPETE----SVVGWAIDAVR 106 Query: 95 KRDVVR--ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS-ERFD 151 DVV I+DL TG+GA+ LA+ +E P + V++S AL + NA + V+ + D Sbjct: 107 AMDVVEPLIVDLCTGSGAIALAMAQEVPRSRVHAVELSDDALVWTRKNAEGSRVTVHQGD 166 Query: 152 TLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIAD 211 L + ++G D+++SNPPYI + + E RD DP ++L G DGL R I Sbjct: 167 ALSA--LPELDGQVDLVISNPPYIPLTEWEYVAPEARDHDPEMALFSGEDGLDTIRGIER 224 Query: 212 GVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 R L GL +E Q V IF Sbjct: 225 TAHRLLRPGGLVVIEHADTQGGQVPWIF 252 >gi|198284466|ref|YP_002220787.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Acidithiobacillus ferrooxidans ATCC 53993] gi|218665820|ref|YP_002427133.1| modification methylase, HemK family [Acidithiobacillus ferrooxidans ATCC 23270] gi|198248987|gb|ACH84580.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Acidithiobacillus ferrooxidans ATCC 53993] gi|218518033|gb|ACK78619.1| modification methylase, HemK family [Acidithiobacillus ferrooxidans ATCC 23270] Length = 288 Score = 92.4 bits (228), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 69/207 (33%), Positives = 103/207 (49%), Gaps = 11/207 (5%) Query: 55 LGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLA 114 LG FY + L +S + PRP+TE LV +L + + VR+LDLG G+GA+ LA Sbjct: 85 LGEWSFYGLDLRVSPEVLIPRPDTETLV----TLALEGLAEEGAVRVLDLGAGSGAIALA 140 Query: 115 LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL--FDVIVSNP 172 + P + GV+ S AL +A++N ++ R L+ DW++ ++G FD IV+NP Sbjct: 141 IALARPQAEVWGVEHSPAALRVARANGAL--LASRVHWLEGDWYAPLDGALRFDRIVANP 198 Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232 PY+ D L +PR +L G GL I G L+ G+ +E G +Q Sbjct: 199 PYLAD---DDPHLPDLHHEPRDALVAGPRGLECLERIIAGAYERLSTSGMLLLEHGPDQG 255 Query: 233 VDVVRIFESRKLFLVNAFKDYGGNDRV 259 V R+ + L V D G +RV Sbjct: 256 AAVRRLLGNAGLCAVRTRCDLAGRERV 282 >gi|70725919|ref|YP_252833.1| hypothetical protein SH0918 [Staphylococcus haemolyticus JCSC1435] gi|68446643|dbj|BAE04227.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435] Length = 277 Score = 92.4 bits (228), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 70/227 (30%), Positives = 111/227 (48%), Gaps = 14/227 (6%) Query: 41 AIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEK-RDVV 99 A R L E I I+G++ FY + ++ PRPETE ++ L +E + Sbjct: 58 ATERMLLGEPIQYIVGFQSFYGYQFQVNEHCLIPRPETEEVM-------LHFLENCKSSA 110 Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSD 156 I D+GTG+G + + L K + F DI + LE+A NA + V+ F + L+ Sbjct: 111 TIADIGTGSGVLAITLKKLNKDFTVYATDIVQETLEVASDNAHYHEVAVTFLKGNALKPF 170 Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216 ++++ D IVSNPPYI+ ++ + V ++P +L G + Y I + + + Sbjct: 171 IQNNIK--LDGIVSNPPYIDVDEMEMMENTVVKYEPHKALFAENKGFAIYELILNDLPKV 228 Query: 217 LNKDGLCSVEIGYNQKVDVVR-IFESRKLFLVNAFKDYGGNDRVLLF 262 LNKD + EIGYNQ + I E V KD GN+R++ F Sbjct: 229 LNKDAYVTFEIGYNQGERLKNIILEKYPKLDVKVIKDINGNERIVSF 275 >gi|42518856|ref|NP_964786.1| hypothetical protein LJ0931 [Lactobacillus johnsonii NCC 533] gi|41583142|gb|AAS08752.1| hypothetical protein LJ_0931 [Lactobacillus johnsonii NCC 533] gi|329667597|gb|AEB93545.1| hypothetical protein LJP_1223c [Lactobacillus johnsonii DPC 6026] Length = 280 Score = 92.4 bits (228), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 69/209 (33%), Positives = 110/209 (52%), Gaps = 16/209 (7%) Query: 50 SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109 S ILG+ FY ++ ++ PR ETE LV ++L IE +ILDLGTG+G Sbjct: 67 SPQYILGYAWFYGYKILVNRGVLIPRFETEELV----KWALENIESGK--KILDLGTGSG 120 Query: 110 AVCLALLKESPFFKGV------GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG 163 A+ +AL+K++ +G+ DI+ AL ++ N + + + T +++ +E Sbjct: 121 AIMVALVKQAQK-QGIQNLNLYASDITDSALRESEENFLKYDLDVK--TRKANVLVGLEK 177 Query: 164 LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223 FD+I+SNPPYI++ + + V +P +L GG DGL YR A V HLN G Sbjct: 178 -FDMIISNPPYIKTSEKNLMDKNVIKNEPDTALYGGEDGLDFYRKFAKQVQSHLNPQGQF 236 Query: 224 SVEIGYNQKVDVVRIFESRKLFLVNAFKD 252 +E G+++K + +FE+ FKD Sbjct: 237 FLEFGFSEKEQLKELFETELPDFEIEFKD 265 >gi|326403020|ref|YP_004283101.1| protein methyltransferase HemK [Acidiphilium multivorum AIU301] gi|325049881|dbj|BAJ80219.1| protein methyltransferase HemK [Acidiphilium multivorum AIU301] Length = 280 Score = 92.4 bits (228), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 71/178 (39%), Positives = 101/178 (56%), Gaps = 3/178 (1%) Query: 54 ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113 I G + F+++ L +S T PRP+TE L+++AL R ++R + ILDLGTGTGA+ L Sbjct: 69 ITGAKGFWSLDLAVSPATLIPRPDTETLIEAALRH---RPDRRTIRTILDLGTGTGALLL 125 Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173 A L E P G+G+D A +A++NA G++ R DW ++ FD+I++NPP Sbjct: 126 AALAEYPDAFGIGIDRVPAACALARANAARTGLAARAAFCCGDWADALAARFDLILANPP 185 Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231 YI S + L EV +P +LDGG DG YR I + R L GL +E G Q Sbjct: 186 YIPSADIPGLMAEVAAHEPASALDGGADGFDAYRRIVADLPRLLAPGGLAILEAGIGQ 243 >gi|317052431|ref|YP_004113547.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Desulfurispirillum indicum S5] gi|316947515|gb|ADU66991.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Desulfurispirillum indicum S5] Length = 293 Score = 92.4 bits (228), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 65/210 (30%), Positives = 101/210 (48%), Gaps = 11/210 (5%) Query: 39 TNAIVRSLKH--------ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALA-FS 89 T ++S KH E + I G ++F + + PR +TE + A+A Sbjct: 60 TPEELQSFKHLLQRRTGGEPLAYITGEQNFLGLDFQVGPGVLIPRFDTETIAMEAVARLR 119 Query: 90 LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 LP ++ + L G+G + +A + P + DI ALE A+ NA + + Sbjct: 120 LPCAPQQPAILDLCCGSGVLGITVAHMAGKPCQLTL-ADIDPAALEYAQRNASRHLGAGA 178 Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209 + L SD F ++ G FD+I+ NPPY++ + EVR +P +LDGG DGL YR + Sbjct: 179 WHVLPSDLFGAIRGTFDLILCNPPYLDQAHLSEREDEVR-HEPLHALDGGRDGLDFYRAL 237 Query: 210 ADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 A G HLN G +E GY+Q + +F Sbjct: 238 ARGFRHHLNPGGRMLLEAGYDQHQSLASLF 267 >gi|148378144|ref|YP_001252685.1| protein methyltransferase [Clostridium botulinum A str. ATCC 3502] gi|153933674|ref|YP_001382545.1| HemK family modification methylase [Clostridium botulinum A str. ATCC 19397] gi|153935975|ref|YP_001386097.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Clostridium botulinum A str. Hall] gi|148287628|emb|CAL81693.1| protein methyltransferase [Clostridium botulinum A str. ATCC 3502] gi|152929718|gb|ABS35218.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Clostridium botulinum A str. ATCC 19397] gi|152931889|gb|ABS37388.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Clostridium botulinum A str. Hall] Length = 283 Score = 92.4 bits (228), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 71/258 (27%), Positives = 118/258 (45%), Gaps = 7/258 (2%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L +V ++ +PD + + ++ I I ILG +F + Sbjct: 25 DAQLLLGKVLKKDRLFILTNPDYHIKEEEKEKYFQLIDLRKNKMPIKYILGTTEFMGLNF 84 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 + PRP+TE+LV++ L I+ ++ +I D+ G+G + + + + + Sbjct: 85 NIKKGVLIPRPDTEILVETVLE----EIKNKNYKQICDVCCGSGIIGITIGYTLNNTEII 140 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIVDC 182 DI K N + + + +R L+SD + + FD+IVSNPPYI +++ Sbjct: 141 CYDIEDIPYNTTKENILKHNLQDRVKALKSDLLTEAIKEKRRFDLIVSNPPYIREDVIET 200 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 L +V+ ++P +L GG DGL Y I LN G + EIGY+QK+ V I Sbjct: 201 LMDDVKKYEPFEALCGGKDGLFFYEGIIKQSLEVLNDGGTIAFEIGYDQKIQVSHILNEY 260 Query: 243 KLFLVNAFKDYGGNDRVL 260 V KD G DRV+ Sbjct: 261 GFKDVLCIKDLAGKDRVI 278 >gi|269214146|ref|ZP_05983696.2| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Neisseria cinerea ATCC 14685] gi|269144447|gb|EEZ70865.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Neisseria cinerea ATCC 14685] Length = 308 Score = 92.4 bits (228), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 54/144 (37%), Positives = 80/144 (55%), Gaps = 2/144 (1%) Query: 91 PRIEKRDVVR-ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 P IE ++V LDL TG+G + + + P VD+S ALE+A N G+ ER Sbjct: 132 PWIEYDELVHNALDLCTGSGCLAIQMAHHYPDAHIDAVDVSLDALEVAGINVEDYGLEER 191 Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209 + +D F +EG +D+IVSNPPY+++ V+ L E +P ++L G DGL R I Sbjct: 192 IQLIHTDLFEGLEGTYDLIVSNPPYVDAESVELLPEEYL-HEPELALGSGEDGLDAIRQI 250 Query: 210 ADGVSRHLNKDGLCSVEIGYNQKV 233 ++ LN G+ VEIG+N+ V Sbjct: 251 LLNAAKFLNPKGVLLVEIGHNRDV 274 >gi|291613905|ref|YP_003524062.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Sideroxydans lithotrophicus ES-1] gi|291584017|gb|ADE11675.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Sideroxydans lithotrophicus ES-1] Length = 301 Score = 92.0 bits (227), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 56/161 (34%), Positives = 91/161 (56%), Gaps = 8/161 (4%) Query: 74 PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV--GVDISC 131 PR L+ LA + +E+ + +LD+ TG+G CLA+L F VD+S Sbjct: 113 PRSFIAELLREQLAPWISDVER--IHNVLDMCTGSG--CLAILAAHAFPDAHVDAVDLSA 168 Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDF 190 AL++A+ N + ER ++SD F +EG +D+I+SNPPY+++ V L E + + Sbjct: 169 DALDVAQYNVTDYDLEERISLIESDMFDKLEGKRYDLIISNPPYVDAPSVAALPQEYK-Y 227 Query: 191 DPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231 +P+ +L G DGL R I + ++HL +G+ VEIG+N+ Sbjct: 228 EPQQALGSGTDGLDATRVILEHAAKHLTSNGILVVEIGHNR 268 >gi|224536351|ref|ZP_03676890.1| hypothetical protein BACCELL_01225 [Bacteroides cellulosilyticus DSM 14838] gi|224522048|gb|EEF91153.1| hypothetical protein BACCELL_01225 [Bacteroides cellulosilyticus DSM 14838] Length = 278 Score = 92.0 bits (227), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 79/259 (30%), Positives = 113/259 (43%), Gaps = 12/259 (4%) Query: 7 SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66 S C + G + + D +L ++ L + + R E I ILG F Sbjct: 25 SRIICCEILGQQTVDYYLGKDIILSVKEEQELESILARLHNFEPIQYILGEARFLGRTFR 84 Query: 67 LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126 ++ PRPETE LV+ L E V R+LD+GTG+G + ++L KE P + Sbjct: 85 VTPGVLIPRPETEELVEMMLK------ELSPVSRVLDVGTGSGCIAISLAKELPESQVTA 138 Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSD---WFSSVEGLFDVIVSNPPYIESVIVDCL 183 D+S +AL IA +N+ S RF+ Q D + V +DVIVSNPPY+ + Sbjct: 139 WDVSGEALSIAAANSKALQASVRFE--QRDVLTYEPCVADCYDVIVSNPPYVTEAEKQEM 196 Query: 184 GLEVRDFDPRISL-DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 V D++P ++L D L YR IA L G EI D V + Sbjct: 197 EHNVLDWEPSLALFVPDTDPLRFYRRIAVLGLEMLTSGGKLYFEINRAFGKDTVAMLCET 256 Query: 243 KLFLVNAFKDYGGNDRVLL 261 V KD NDR ++ Sbjct: 257 GYRAVRLQKDISHNDRFVI 275 >gi|15805280|ref|NP_293969.1| hemK protein [Deinococcus radiodurans R1] gi|6457913|gb|AAF09827.1|AE001885_11 hemK protein [Deinococcus radiodurans R1] Length = 278 Score = 92.0 bits (227), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 64/188 (34%), Positives = 98/188 (52%), Gaps = 7/188 (3%) Query: 40 NAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV 99 ++I R + + G ++ VRLT + PRPETE L+ AL L R+EK Sbjct: 59 DSIERRAARVPLQHLTGEVEWGGVRLTSDARALVPRPETEWLLHLALE-ELRRVEK---P 114 Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+LD+GTGTGA+ L L P + D+S +AL +A+ NA +G+ +F ++ + Sbjct: 115 RVLDVGTGTGALALGLKAAIPQAEVTATDLSPEALSLARENAALSGLDVKF--VEGSLLA 172 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 + G F++IVSNPPY+ + EVR DP ++L G DGL R + + L Sbjct: 173 GLSGPFNLIVSNPPYLPTADRATADPEVR-HDPDLALYAGEDGLDVARPLVAEAAAALVP 231 Query: 220 DGLCSVEI 227 G +E+ Sbjct: 232 GGALLLEL 239 >gi|75758470|ref|ZP_00738591.1| Peptide release factor-glutamine N5-methyltransferase [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|74493997|gb|EAO57092.1| Peptide release factor-glutamine N5-methyltransferase [Bacillus thuringiensis serovar israelensis ATCC 35646] Length = 273 Score = 92.0 bits (227), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 61/215 (28%), Positives = 106/215 (49%), Gaps = 11/215 (5%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110 I G+ ++ ++ + + P PE ++ +++A + + ++++L TG+G Sbjct: 61 IQYYAGYTYTFDKKIIIDRNVMIPGPEMDIFINTAKKYM------TNCHKVMELCTGSGV 114 Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL----FD 166 + + L E P DIS KAL++A+ N + + L+ F E FD Sbjct: 115 IPVMLGMEYPDVDFYASDISDKALKVAQEN-INFYQLKNVHLLKGSMFEPFEEQNKTGFD 173 Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE 226 +++SNPPY ++ I+ L +++D PRISLDGG DGL YR I + LNK+G E Sbjct: 174 MLISNPPYAKTGIIGDLIPQLKDNAPRISLDGGEDGLDFYRIILANAHKFLNKNGYIIFE 233 Query: 227 IGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 G +Q + +F +V KDY +R ++ Sbjct: 234 NGEDQSEKIQELFIQNGFKVVEVVKDYINIERFIV 268 >gi|195053095|ref|XP_001993466.1| GH13055 [Drosophila grimshawi] gi|193900525|gb|EDV99391.1| GH13055 [Drosophila grimshawi] Length = 328 Score = 92.0 bits (227), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 71/241 (29%), Positives = 120/241 (49%), Gaps = 23/241 (9%) Query: 30 LDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFS 89 L D +RF L+H I+G DF ++ L + F PRPETE V Sbjct: 92 LADFERFLEARCARMPLQH-----IIGEWDFMDITLKTAPTVFIPRPETEEFV----RLV 142 Query: 90 LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 + ++ + V +L++G G+GA+ L++L P + ++ S A +A NA G+ +R Sbjct: 143 IDNYKRAEHVNMLEVGCGSGAMSLSMLHALPQVQATAIERSKAATALAWENAKLLGLQQR 202 Query: 150 FD----TLQSDWF---SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202 F+ T+++D + S + +D+I+SNPPY+++ L EV ++ +LDGG DG Sbjct: 203 FEVHNHTMETDKYMPESLHDKRYDLIISNPPYVKTDEFQYLHPEVVVYENLNALDGGSDG 262 Query: 203 LSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI-----FESRKLFLVNAFKDYGGND 257 L R + D HL G +E+G N+ +V+ +E R L V +++D + Sbjct: 263 LRVARLVFDLACVHLRPGGKLWLELG-NEHPPLVKTIMHLQYEGR-LKFVQSYQDQYKRE 320 Query: 258 R 258 R Sbjct: 321 R 321 >gi|170062547|ref|XP_001866716.1| HemK methyltransferase family member 1 [Culex quinquefasciatus] gi|167880450|gb|EDS43833.1| HemK methyltransferase family member 1 [Culex quinquefasciatus] Length = 328 Score = 92.0 bits (227), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 70/241 (29%), Positives = 113/241 (46%), Gaps = 13/241 (5%) Query: 27 DSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL 86 D+VL D Q + + + I+ DF ++ L + F PRPETE LV+ Sbjct: 85 DAVLSDAQLAKIEELCECRIARMPVQYIIREWDFRDMTLKMVPPVFIPRPETEELVE--- 141 Query: 87 AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146 L +I+ + L++G G+GA+ L+LLK+ P + +D S A E+ NA Sbjct: 142 -LILQQIDTQKEFSFLEIGCGSGAITLSLLKQVPKATAIALDQSKLACELTLENAKRYDF 200 Query: 147 SERFDTLQSDWFSSVEG-----LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201 SE+ + + FD+IVSNPPY+ S + L EV+ ++ +LDGG D Sbjct: 201 SEKLRIFKHKLVDKLPDELAGHRFDMIVSNPPYVPSGQLQRLDPEVKVYEDLRALDGGPD 260 Query: 202 GLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR----KLFLVNAFKDYGGND 257 GL+ + I S HL +G+ +E+ + + E L V+++KD + Sbjct: 261 GLTVIKAILTIASDHLADEGILWLEVDTSHPPLIAGYLEEHGERLGLRYVSSYKDLFRKE 320 Query: 258 R 258 R Sbjct: 321 R 321 >gi|240128575|ref|ZP_04741236.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Neisseria gonorrhoeae SK-93-1035] gi|268686967|ref|ZP_06153829.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Neisseria gonorrhoeae SK-93-1035] gi|268627251|gb|EEZ59651.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Neisseria gonorrhoeae SK-93-1035] Length = 303 Score = 92.0 bits (227), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 54/144 (37%), Positives = 80/144 (55%), Gaps = 2/144 (1%) Query: 91 PRIEKRDVVR-ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 P IE ++V LDL TG+G + + + P + VD+S ALE+A N G+ ER Sbjct: 127 PWIEYDELVHNALDLCTGSGCLAIQMAYHYPDAQIDAVDVSLDALEVAGINIEDYGLEER 186 Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209 + +D F +EG +D+IVSNPPY+++ V L E +P ++L G DGL R I Sbjct: 187 IQLIHTDLFEGLEGTYDLIVSNPPYVDAESVGALPEEYL-HEPELALGSGADGLDATRQI 245 Query: 210 ADGVSRHLNKDGLCSVEIGYNQKV 233 ++ LN G+ VEIG+N+ V Sbjct: 246 LLNAAKFLNPKGVLLVEIGHNRDV 269 >gi|228905534|ref|ZP_04069483.1| Peptide release factor-glutamine N5-methyltransferase [Bacillus thuringiensis IBL 4222] gi|228854070|gb|EEM98779.1| Peptide release factor-glutamine N5-methyltransferase [Bacillus thuringiensis IBL 4222] Length = 275 Score = 92.0 bits (227), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 61/215 (28%), Positives = 106/215 (49%), Gaps = 11/215 (5%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110 I G+ ++ ++ + + P PE ++ +++A + + ++++L TG+G Sbjct: 63 IQYYAGYTYTFDKKIIIDRNVMIPGPEMDIFINTAKKYM------TNCHKVMELCTGSGV 116 Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL----FD 166 + + L E P DIS KAL++A+ N + + L+ F E FD Sbjct: 117 IPVMLGMEYPDVDFYASDISDKALKVAQEN-INFYQLKNVHLLKGSMFEPFEEQNKTGFD 175 Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE 226 +++SNPPY ++ I+ L +++D PRISLDGG DGL YR I + LNK+G E Sbjct: 176 MLISNPPYAKTGIIGDLIPQLKDNAPRISLDGGEDGLDFYRIILANAHKFLNKNGYIIFE 235 Query: 227 IGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 G +Q + +F +V KDY +R ++ Sbjct: 236 NGEDQSEKIQELFIQNGFKVVEVVKDYINIERFIV 270 >gi|21241678|ref|NP_641260.1| protoporphyrinogen oxidase [Xanthomonas axonopodis pv. citri str. 306] gi|21107043|gb|AAM35796.1| protoporphyrinogen oxidase [Xanthomonas axonopodis pv. citri str. 306] Length = 286 Score = 92.0 bits (227), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 70/221 (31%), Positives = 108/221 (48%), Gaps = 7/221 (3%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101 + R E + + G R F+ + L +S T PR +TE LV+ +L R++ R+ Sbjct: 61 VQRREAGEPVAYLTGSRGFWTLDLAVSPATLIPRADTEALVE----LALERLDTLPGRRV 116 Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 DLGTG+GA+ LA+ E P + + D S AL +A+ NA ++ + + WF+ + Sbjct: 117 ADLGTGSGAIALAIASERPQAQVIATDASAAALAMAQRNADSHSL-RNVECRLGGWFAPL 175 Query: 162 EG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220 G FD+I SNPPYI + ++R ++P +L G DGL R I HL Sbjct: 176 AGETFDLIASNPPYIAAHDSHLQQGDLR-YEPASALASGSDGLDDIRLIVADAPAHLLPG 234 Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 G +E G++Q V + +R V +D DRV L Sbjct: 235 GWLLLEHGWDQGAAVAELLVARGFAAVATHQDLEQRDRVTL 275 >gi|325281900|ref|YP_004254442.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Odoribacter splanchnicus DSM 20712] gi|324313709|gb|ADY34262.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Odoribacter splanchnicus DSM 20712] Length = 290 Score = 92.0 bits (227), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 85/277 (30%), Positives = 130/277 (46%), Gaps = 28/277 (10%) Query: 1 MQALRDSHS-----FLCRVTGLSS-HQVIVD----PDSVLDDR--QRFFLTNAIVRSLKH 48 +Q L+DS+S +CR+ + H +D + +LD+ +F IVR LK Sbjct: 12 LQELKDSYSEHEIECICRIVYMDVLHYTNIDIHLRKNEILDESFINKFI---GIVRLLKS 68 Query: 49 ES-IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTG 107 S I ILG F +R + PRPETE LV + P R+LD+G+G Sbjct: 69 GSPIQYILGETGFAGLRFKSTPSALIPRPETEELVRWVGEWLKPG------NRLLDVGSG 122 Query: 108 TGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGL 164 +G + ++L + GVDIS +A+E+A+ NA+ NGV F D L ++ Sbjct: 123 SGCIGISLARLCQGAHVTGVDISPEAIELARENAILNGVKAEFLLRDILHPQ--TASWDT 180 Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRISL-DGGIDGLSHYRTIADGVSRHLNKDGLC 223 +D+IVSNPPYI + +V D +P +L D L YR IA+ HL+ GL Sbjct: 181 YDLIVSNPPYIRESEKGTMEAKVLDHEPHQALFVPDEDPLLFYRAIAEFGLTHLHPQGLL 240 Query: 224 SVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 EI + + + + KD+ G +R++ Sbjct: 241 FFEINEAFGQETIALLTRYGYRNIELRKDFYGKERMV 277 >gi|157694095|ref|YP_001488557.1| polypeptide chain release factor methyltransferase [Bacillus pumilus SAFR-032] gi|157682853|gb|ABV63997.1| polypeptide chain release factor methyltransferase [Bacillus pumilus SAFR-032] Length = 295 Score = 92.0 bits (227), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 75/266 (28%), Positives = 118/266 (44%), Gaps = 9/266 (3%) Query: 2 QALRDSHS---FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWR 58 +A RD ++ L V LS +++ L D Q + + K + ++G Sbjct: 21 EAGRDQNAAELLLMHVLDLSRSELLARFHDQLPDEQDRLFREFVTQHKKGVPVQHLIGIE 80 Query: 59 DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118 FY ++ PRPETE +V +AL ++ +D+GTG+GA+ + L E Sbjct: 81 FFYGRPFEVNKHVLIPRPETEEVVLAALNLMSDIFPHDQPLKAVDVGTGSGAIAITLALE 140 Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGL-FDVIVSNPPYI 175 DIS +AL +AK N G F LQ D + +G+ D+ +SNPPYI Sbjct: 141 KETLSVTATDISHEALAVAKRNQQALGADVHF--LQGDLLEPIKDQGIKVDLFISNPPYI 198 Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235 + + L V +P +L G DGL Y+ + + L++ + EIG+ Q DV Sbjct: 199 AADEMGGLSEVVTKHEPVNALTDGRDGLWFYKRLVRDLHHVLHEQAVVVFEIGHKQAQDV 258 Query: 236 -VRIFESRKLFLVNAFKDYGGNDRVL 260 + +S V KD G DR + Sbjct: 259 KTLLLQSFPAADVRIVKDINGKDRAV 284 >gi|182420255|ref|ZP_02951484.1| methyltransferase, HemK family [Clostridium butyricum 5521] gi|237666626|ref|ZP_04526611.1| modification methylase, HemK family [Clostridium butyricum E4 str. BoNT E BL5262] gi|182375850|gb|EDT73442.1| methyltransferase, HemK family [Clostridium butyricum 5521] gi|237657825|gb|EEP55380.1| modification methylase, HemK family [Clostridium butyricum E4 str. BoNT E BL5262] Length = 585 Score = 92.0 bits (227), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 68/218 (31%), Positives = 105/218 (48%), Gaps = 7/218 (3%) Query: 47 KHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGT 106 K + IL +F + L + PR +TELLVD L I + D +I DL Sbjct: 369 KKMPVKYILNKCEFMGIDLHVEEGVLIPRDDTELLVDEVLK----NISEDDEKQICDLCC 424 Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS---SVEG 163 G+GA+ ++L K +D ++ N + + ER +SD Sbjct: 425 GSGAIGISLACLRKNIKVDLLDYYPIPEKVTLINIEKHNLQERVSFSKSDLLDVSIKASK 484 Query: 164 LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223 +D+IVSNPPYIE ++ L +V+ ++P +L GGIDGL Y+ I + LN++G+ Sbjct: 485 KYDIIVSNPPYIEEEEIEKLMDDVQKYEPHTALSGGIDGLDFYKKIVNQSIEVLNENGIL 544 Query: 224 SVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 + EIGYNQ V + E V KD+ DR+++ Sbjct: 545 AFEIGYNQGKAVKSLMEENNFKDVRVIKDFASLDRIVI 582 >gi|239982316|ref|ZP_04704840.1| putative methyltransferase [Streptomyces albus J1074] Length = 281 Score = 91.7 bits (226), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 68/209 (32%), Positives = 98/209 (46%), Gaps = 13/209 (6%) Query: 40 NAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV 99 AI R E + I G F + L + F PRPETE S + +++ + DVV Sbjct: 56 EAIARREAREPLQHITGLAYFRYLELQVGPGVFVPRPETE----SVVGWAIDAVRAMDVV 111 Query: 100 R--ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 ++DL +G+GA+ LAL +E P V++S AL + N + R Q D Sbjct: 112 EPLVVDLCSGSGAIALALAQEVPRSTVHAVELSEDALVWTRKNVEGS----RVHLHQGDA 167 Query: 158 FSSV---EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214 F ++ +G D+++SNPPYI + + E RD DP+++L G DGL R I Sbjct: 168 FGALPELDGQVDLVISNPPYIPLTEWEYVAPEARDHDPQMALFSGEDGLDTIRGIERTAH 227 Query: 215 RHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 R L G+ VE Q V IF K Sbjct: 228 RLLRPGGIVVVEHADTQGGQVPWIFTEEK 256 >gi|238063045|ref|ZP_04607754.1| modification methylase hemK [Micromonospora sp. ATCC 39149] gi|237884856|gb|EEP73684.1| modification methylase hemK [Micromonospora sp. ATCC 39149] Length = 267 Score = 91.7 bits (226), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 57/188 (30%), Positives = 91/188 (48%), Gaps = 6/188 (3%) Query: 44 RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103 R + E + ILGW +F +R+ + S F PR T LV+ A+A + P ++D Sbjct: 45 RRVLGEPLEAILGWAEFCGLRVIVESGVFVPRQRTTYLVEQAVAVTSPG------AVVVD 98 Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG 163 L GTGA+ A+ P + DI ++ A+ N G L + G Sbjct: 99 LCCGTGAIGAAVAARVPGTRLYACDIEPASVRCARRNLEPIGGHVYEGDLYDALPGRLRG 158 Query: 164 LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223 DV+V N PY+ + + + E R+ +P ++LDGG DG+ +R +A+G +R L G Sbjct: 159 AVDVLVVNAPYVPTDEIAMMPPEAREHEPLVALDGGFDGVEVHRRVAEGAARWLAPGGHL 218 Query: 224 SVEIGYNQ 231 +E G +Q Sbjct: 219 IIETGESQ 226 >gi|189464286|ref|ZP_03013071.1| hypothetical protein BACINT_00627 [Bacteroides intestinalis DSM 17393] gi|189438076|gb|EDV07061.1| hypothetical protein BACINT_00627 [Bacteroides intestinalis DSM 17393] Length = 278 Score = 91.7 bits (226), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 79/259 (30%), Positives = 113/259 (43%), Gaps = 12/259 (4%) Query: 7 SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66 S C + G S + D L + L + + R E I ILG F Sbjct: 25 SRLICCEILGQSVVDYYLGKDITLSAKAEQELQSLLRRLRNFEPIQYILGEARFLGRTFQ 84 Query: 67 LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126 ++S PRPETE LV+ L E R+LD+GTG+G + L KE P + Sbjct: 85 VASGVLIPRPETEELVEIMLK------EISSTSRVLDIGTGSGCIAATLAKELPGAQVTA 138 Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL---FDVIVSNPPYIESVIVDCL 183 D+S +AL IA +N++ V F+ Q D + + G+ +DVIVSNPPY+ + Sbjct: 139 WDVSEEALAIAAANSLALQVPVCFE--QRDVLTYIPGVTERYDVIVSNPPYVTEAEKQDM 196 Query: 184 GLEVRDFDPRISL-DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 V D++P ++L D L YR I+ L DG EI D+V + Sbjct: 197 ERNVLDWEPSLALFVPDADPLRFYRRISVLGLEILEPDGKLYFEINRTFGEDIVLMMREL 256 Query: 243 KLFLVNAFKDYGGNDRVLL 261 V KD NDR ++ Sbjct: 257 GYRFVRLQKDISHNDRFVI 275 >gi|291454160|ref|ZP_06593550.1| methylase [Streptomyces albus J1074] gi|291357109|gb|EFE84011.1| methylase [Streptomyces albus J1074] Length = 285 Score = 91.7 bits (226), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 68/209 (32%), Positives = 98/209 (46%), Gaps = 13/209 (6%) Query: 40 NAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV 99 AI R E + I G F + L + F PRPETE S + +++ + DVV Sbjct: 60 EAIARREAREPLQHITGLAYFRYLELQVGPGVFVPRPETE----SVVGWAIDAVRAMDVV 115 Query: 100 R--ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 ++DL +G+GA+ LAL +E P V++S AL + N + R Q D Sbjct: 116 EPLVVDLCSGSGAIALALAQEVPRSTVHAVELSEDALVWTRKNVEGS----RVHLHQGDA 171 Query: 158 FSSV---EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214 F ++ +G D+++SNPPYI + + E RD DP+++L G DGL R I Sbjct: 172 FGALPELDGQVDLVISNPPYIPLTEWEYVAPEARDHDPQMALFSGEDGLDTIRGIERTAH 231 Query: 215 RHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 R L G+ VE Q V IF K Sbjct: 232 RLLRPGGIVVVEHADTQGGQVPWIFTEEK 260 >gi|16080753|ref|NP_391581.1| glutamine methylase [Bacillus subtilis subsp. subtilis str. 168] gi|221311661|ref|ZP_03593508.1| hypothetical protein Bsubs1_20001 [Bacillus subtilis subsp. subtilis str. 168] gi|221315989|ref|ZP_03597794.1| hypothetical protein BsubsN3_19922 [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221320900|ref|ZP_03602194.1| hypothetical protein BsubsJ_19865 [Bacillus subtilis subsp. subtilis str. JH642] gi|221325184|ref|ZP_03606478.1| hypothetical protein BsubsS_20026 [Bacillus subtilis subsp. subtilis str. SMY] gi|321313250|ref|YP_004205537.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Bacillus subtilis BSn5] gi|1170229|sp|P45873|HEMK_BACSU RecName: Full=Protein methyltransferase hemK homolog gi|853777|emb|CAA89885.1| ywkE [Bacillus subtilis subsp. subtilis str. 168] gi|2636225|emb|CAB15717.1| glutamine methylase of release factor 1 (and perhaps others) at a GGQ site [Bacillus subtilis subsp. subtilis str. 168] gi|291486284|dbj|BAI87359.1| hypothetical protein BSNT_05651 [Bacillus subtilis subsp. natto BEST195] gi|320019524|gb|ADV94510.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Bacillus subtilis BSn5] Length = 288 Score = 91.7 bits (226), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 72/232 (31%), Positives = 108/232 (46%), Gaps = 13/232 (5%) Query: 40 NAIVRSLKHESIHR-------ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPR 92 + + R +H +H+ I+G FY ++ D PRPETE +V L Sbjct: 51 DELYRFKRHVEMHKEGVPVQYIIGKEFFYGREFMVNDDVLIPRPETEEVVFHLLEKYRSV 110 Query: 93 IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF-- 150 + + ++D+GTG+GA+ + L E+ F VDIS +AL++A +NA G + RF Sbjct: 111 FSEDGKLEVVDVGTGSGAIAVTLALENQSFSVSAVDISKEALQVASANAEKLGANVRFYQ 170 Query: 151 -DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209 D L+ F D+IVSNPPYI + L VR +P +L G DGL Y+ Sbjct: 171 GDLLEP--FIKAGKKADIIVSNPPYISEEEMADLSEIVRFHEPLHALTDGGDGLKFYKRF 228 Query: 210 ADGVSRHLNKDGLCSVEIGYNQKVDVVR-IFESRKLFLVNAFKDYGGNDRVL 260 + + + EIG+ Q V I ++ K V KD G DR + Sbjct: 229 MEDIPLVMKDKVFVVFEIGWKQGAAVKDLILKAFKGAEVEVLKDINGKDRTI 280 >gi|16330666|ref|NP_441394.1| protoporphyrinogen oxidase [Synechocystis sp. PCC 6803] gi|2829611|sp|P74003|HEMK_SYNY3 RecName: Full=Protein methyltransferase hemK homolog; AltName: Full=M.Ssp6803HemKP gi|1653158|dbj|BAA18074.1| protoporphyrinogen oxidase [Synechocystis sp. PCC 6803] Length = 299 Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 67/198 (33%), Positives = 90/198 (45%), Gaps = 18/198 (9%) Query: 57 WRDFYNVRLTLSSDTFEPRPETELLVD------SALAFSLPRIEKRDVVRILDLGTGTGA 110 WRDF + ++ D PRPETEL++D SAL+ S +DLGTG+GA Sbjct: 89 WRDFV---IKVTDDVLIPRPETELIIDIVQHEHSALSPS------NCADHWVDLGTGSGA 139 Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDV 167 + L L P VD S AL IA+ NA N +R Q W+ +E G Sbjct: 140 IALGLAATFPQALVHAVDCSGSALAIARENAQLNQFGDRIQFHQGYWWEPLEHLKGQVQG 199 Query: 168 IVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227 +VSNPPYI + L EV +P ++LDGG DGL + +L G VEI Sbjct: 200 MVSNPPYIPQRELAQLQPEVIKHEPLLALDGGPDGLQAVEQLIRRSPTYLKPGGFWLVEI 259 Query: 228 GYNQKVDVVRIFESRKLF 245 Q V + + + Sbjct: 260 MTGQAPMVAELLRASGAY 277 >gi|322792390|gb|EFZ16374.1| hypothetical protein SINV_10611 [Solenopsis invicta] Length = 350 Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 70/236 (29%), Positives = 114/236 (48%), Gaps = 28/236 (11%) Query: 46 LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIE--KRDVVRILD 103 L + I+G DF ++ + L F PRPETE+LVD F L R+ + D IL+ Sbjct: 112 LSRMPVQYIIGEWDFRDITVKLVPPIFIPRPETEILVD----FVLKRLSTSQADSCEILE 167 Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD----TLQSDW-- 157 +G G+GA+ LAL K +D S A ++ N ++E+ TL SD Sbjct: 168 IGCGSGAISLALAHACKTIKCTAIDASPHACDLTMINRKKLNLTEQITVIHATLNSDASI 227 Query: 158 --FSSVEG---------LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206 +++ G LFD ++SNPPY+ + + L E+R ++ +LDGG DGL Sbjct: 228 EILNNLNGADNLDLNSRLFDFVISNPPYVPTKTIPELQPEIRIYEDLRALDGGDDGLKVI 287 Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR----KLFLVNAFKDYGGNDR 258 + + ++ L G +E+ + + V+ F ++ KL + +KD+ NDR Sbjct: 288 KPLLRYAAKALKPGGRLFIEVDPSHP-EYVQFFTNKYSDLKLHHEHTYKDFCNNDR 342 >gi|193216650|ref|YP_001999892.1| protoporphyrinogen oxidase [Mycoplasma arthritidis 158L3-1] gi|193001973|gb|ACF07188.1| protoporphyrinogen oxidase [Mycoplasma arthritidis 158L3-1] Length = 235 Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 75/249 (30%), Positives = 127/249 (51%), Gaps = 24/249 (9%) Query: 23 IVDPDSVLDDRQRFFL----TNAIVRSLKHE-SIHRILGWRDFYNVRLTLSSDTFEPRPE 77 ++D +L +++R+ L +N ++ LK + + +I+G+++ NV + LS PR E Sbjct: 1 MIDKHILLREKERYNLPLEISNKELKLLKKDCPVQKIIGYQEMQNVFIDLSYKVLIPRYE 60 Query: 78 TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137 TE L+ S+ + + K ++LDLG G+G + LA+ K + + VDIS +A++ + Sbjct: 61 TEELIISSYQY----LNKNS--KVLDLGCGSGFIGLAIKKNIGCYVTL-VDISKQAIKQS 113 Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195 + NA N + + ++S+WFS+V+ FDVIVSNPPY+ L ++P+I+ Sbjct: 114 ELNAKLNNLDVKI--IKSNWFSNVKNDERFDVIVSNPPYLNRKNHFAKSL---SYEPKIA 168 Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGG 255 L GL Y I +LN+ G EI N IF + V KD G Sbjct: 169 LFAKKSGLFSYMQILKKAKNYLNESGKLIFEIDQNS-----AIFLKQNYPKVIVKKDING 223 Query: 256 NDRVLLFCR 264 DR+ + + Sbjct: 224 KDRIAILQK 232 >gi|322804408|emb|CBZ01958.1| methylase of polypeptide chain release factors [Clostridium botulinum H04402 065] Length = 283 Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 71/258 (27%), Positives = 118/258 (45%), Gaps = 7/258 (2%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L +V ++ +PD + + ++ I I ILG +F + Sbjct: 25 DAQLLLGKVLKKDRLFILTNPDYHIKEEEKEKYFQLIDLRKNKMPIKYILGTTEFMGLDF 84 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 + PRP+TE+LV++ L I+ ++ +I D+ G+G + + + + + Sbjct: 85 NIKKGVLIPRPDTEILVETVLE----EIKNKNYKQICDVCCGSGIIGITIGYTLNNTEII 140 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIVDC 182 DI K N + + + +R L+SD + + FD+IVSNPPYI +++ Sbjct: 141 CYDIEDIPYNTTKENILKHNLQDRVKALKSDLLTEAIKEKRRFDLIVSNPPYIREDVIET 200 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 L +V+ ++P +L GG DGL Y I LN G + EIGY+QK+ V I Sbjct: 201 LMDDVKKYEPFEALCGGKDGLFFYEGIIKQSLEVLNDGGTIAFEIGYDQKIQVSHILNEY 260 Query: 243 KLFLVNAFKDYGGNDRVL 260 V KD G DRV+ Sbjct: 261 GFKDVLCIKDLAGKDRVI 278 >gi|311113381|ref|YP_003984603.1| protein-(glutamine-N5) methyltransferase [Rothia dentocariosa ATCC 17931] gi|310944875|gb|ADP41169.1| protein-(glutamine-N5) methyltransferase [Rothia dentocariosa ATCC 17931] Length = 313 Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 66/213 (30%), Positives = 105/213 (49%), Gaps = 10/213 (4%) Query: 50 SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109 + I G FY++ + + F PRPETELLV+ AL L E R++DL TG+G Sbjct: 99 PLQHITGVAPFYHLEIKVGPGVFIPRPETELLVEEALRV-LATYESNARPRVVDLCTGSG 157 Query: 110 AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFD 166 A+ A+ +E+P + V++S +AL A+ N V + D +S+E G FD Sbjct: 158 AIAAAVKEENPQAEVFAVELSEQALLWARKNLDPQNVH----LIPGDIRTSLEDLPGYFD 213 Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISL-DGGIDGLSHYRTIADGVSRHLNKDGLCSV 225 +++SNPPYI LEV ++DP+++L GG DG+ R + L G + Sbjct: 214 LVLSNPPYIPP-HRKPQALEVAEYDPQMALYGGGEDGMEIPREVIARAHYLLRPGGFFMM 272 Query: 226 EIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258 E +Q+ V ++ + + +D G R Sbjct: 273 EHDDSQETRVTETLAAQGFVSIYSIRDLNGKPR 305 >gi|120405292|ref|YP_955121.1| HemK family modification methylase [Mycobacterium vanbaalenii PYR-1] gi|119958110|gb|ABM15115.1| modification methylase, HemK family [Mycobacterium vanbaalenii PYR-1] Length = 272 Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 86/263 (32%), Positives = 119/263 (45%), Gaps = 16/263 (6%) Query: 6 DSHSFLCRVTGLSSHQV-IVDPDSVLDDRQRFFLTNAIVR-SLKHESIHRILGWRDFYNV 63 D+ VTG +V V PD R R +T R L+H + G F V Sbjct: 20 DAELLAAHVTGTERGRVAFVQPDDAFAARYRELVTARAERVPLQH-----LTGTAAFGPV 74 Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 + + F PRPETE +++ A+A LP RI+DL TG+GA+ LAL P + Sbjct: 75 TVQVGPGVFVPRPETESVLEWAVAQPLPARP-----RIVDLCTGSGALALALAVAFPAAQ 129 Query: 124 GVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182 VD S AL+ A+ N + V R D + ++G D++V+NPPYI + + Sbjct: 130 VTAVDDSEAALDYARGNVADSSVQLVRADVTAPGLLADLDGSVDLLVANPPYIPAGAL-- 187 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 L EV +DP +L GG DG+S I D +R L G C+VE V F Sbjct: 188 LEPEVAQYDPAHALFGGADGMSVIGPIVDAAARLLRPGGRCAVEHDDTTSEQTVAAFTRD 247 Query: 243 KLFL-VNAFKDYGGNDRVLLFCR 264 F+ V A D G R + R Sbjct: 248 GGFVDVTARHDLAGRPRFVTAVR 270 >gi|294626138|ref|ZP_06704745.1| protoporphyrinogen oxidase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|294665202|ref|ZP_06730501.1| protoporphyrinogen oxidase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292599587|gb|EFF43717.1| protoporphyrinogen oxidase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292605025|gb|EFF48377.1| protoporphyrinogen oxidase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 286 Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 75/224 (33%), Positives = 114/224 (50%), Gaps = 8/224 (3%) Query: 40 NAIVRSLKH-ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV 98 +A+VR + E + + G R F+ + L +S T PR +TE LV+ +L R++ Sbjct: 58 DALVRRREAGEPVAYLTGARGFWTLELAVSPATLIPRADTETLVE----LALERLDTLPG 113 Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 R+ DLGTG+GA+ LA+ E P + + D S AL +A+ NA ++G+ L S WF Sbjct: 114 RRVADLGTGSGAIALAIASERPQAQVIATDASAAALAMARRNADSHGLHNVECRLGS-WF 172 Query: 159 SSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217 + + G FD+I SNPPYI + ++R ++P +L G DGL R I HL Sbjct: 173 APLAGETFDLIASNPPYIAAHDPHLQQGDLR-YEPASALASGSDGLDDIRLIVTDAPAHL 231 Query: 218 NKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 G +E G++Q V + +R V +D DRV L Sbjct: 232 RPGGWLLLEHGWDQGAAVAELLVARGFAAVATHQDLEQRDRVSL 275 >gi|13475623|ref|NP_107190.1| methyl transferase [Mesorhizobium loti MAFF303099] gi|14026379|dbj|BAB52976.1| probable methyl transferase [Mesorhizobium loti MAFF303099] Length = 230 Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 65/213 (30%), Positives = 103/213 (48%), Gaps = 18/213 (8%) Query: 60 FYNVRLTLSSDTFEPRPETELLVDSALA----FSLPRIEKRDVVRILDLGTGTGAVCLAL 115 F + L ++ PRPETELL +AL +LP RI+D+ GTG + A+ Sbjct: 18 FMGLELLVAPGALVPRPETELLGTTALGVLHQMNLP------APRIVDMCCGTGNLACAI 71 Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-----FDVIVS 170 P + D++ +++A+ NA +G+++R LQ D F ++ GL DVIV Sbjct: 72 AHHIPAARVWASDLTDGCVDVARRNAAHHGMADRVSVLQGDLFDALSGLGLDRTIDVIVC 131 Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS-HYRTIADGVSRHLNKDGLCSVEIGY 229 NPPYI ++ + + +PR + G GLS H R + D +L G+ E+G Sbjct: 132 NPPYISEKRLEGDRAHLVELEPREAFAAGPYGLSIHMRVVKD-APLYLRPGGILLFEVGL 190 Query: 230 NQKVDVVRIFESRKLFL-VNAFKDYGGNDRVLL 261 Q V+ + E K + + A + G RV+L Sbjct: 191 GQDRQVMGLLERSKQYENIRAVSNEAGEGRVVL 223 >gi|125987041|ref|XP_001357283.1| GA21859 [Drosophila pseudoobscura pseudoobscura] gi|54645614|gb|EAL34352.1| GA21859 [Drosophila pseudoobscura pseudoobscura] Length = 331 Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 71/238 (29%), Positives = 116/238 (48%), Gaps = 26/238 (10%) Query: 30 LDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFS 89 L D +RF L+H I+G DF ++ L + F PRPETE V + Sbjct: 95 LADFERFLEARCARMPLQH-----IIGEWDFLDITLKTAPTVFIPRPETEEFVRLVIE-- 147 Query: 90 LPRIEKRDV--VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147 +DV V +L++G G+GA+ L++L P + ++ S A +A NA G+ Sbjct: 148 ----NYKDVKHVNMLEVGCGSGAMSLSMLHALPRVEATAIERSKAATVLAAENAKLLGLQ 203 Query: 148 ERFD----TLQSDWFSS---VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200 +RF T++ D + + +D+I+SNPPY+++ L EV ++ +LDGG Sbjct: 204 DRFQVHNHTMEEDQYMPEPLKDKKYDLIISNPPYVKTEEFQFLHPEVVVYENLNALDGGS 263 Query: 201 DGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI-----FESRKLFLVNAFKDY 253 DGL R + D RHL+ G +E+G N+ +V+ +E R F+ + + Y Sbjct: 264 DGLRVARLVFDLACRHLHSGGKLWLELG-NEHPPLVKTIMHLKYEGRLNFVGSYYDQY 320 >gi|116494652|ref|YP_806386.1| methylase of polypeptide chain release factor [Lactobacillus casei ATCC 334] gi|116104802|gb|ABJ69944.1| Methylase of polypeptide chain release factor [Lactobacillus casei ATCC 334] Length = 276 Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 58/201 (28%), Positives = 95/201 (47%), Gaps = 8/201 (3%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101 + R + E I+G F+ ++ PR ETE LV A E+R Sbjct: 61 VERLRQFEPAQYIVGVAPFFGELFKVTPAVLIPRFETEELVAWAAE------EQRTAQTG 114 Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 LDLGTG+GA+ L L ++ P D+S +AL +AK NA V+ +F SD F+++ Sbjct: 115 LDLGTGSGAIGLTLARKLPQTTMTLSDVSPEALAVAKQNAKEQQVAVQFTV--SDLFAAL 172 Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221 +D +V+N PYI + ++P+++L G GL+ + + +HL G Sbjct: 173 PARYDFVVTNLPYIAPEETPVMDQSTLRYEPKLALFAGHHGLAVFEQFVAALPQHLTAGG 232 Query: 222 LCSVEIGYNQKVDVVRIFESR 242 +E GY Q+ + +F + Sbjct: 233 AAYLEFGYRQEPALRELFAKQ 253 >gi|71894204|ref|YP_278312.1| protoporphirogen oxidase HemK [Mycoplasma synoviae 53] gi|71850992|gb|AAZ43601.1| Protoporphirogen oxidase HemK [Mycoplasma synoviae 53] Length = 241 Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 56/182 (30%), Positives = 91/182 (50%), Gaps = 8/182 (4%) Query: 47 KHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGT 106 K+ I +I+G + NV++ LS PR ETE ++ A + I+ ++LDL T Sbjct: 28 KNYPIQKIIGHVEMLNVKIDLSYKVLIPRYETEEVILKAFEY----IKNDSSFKVLDLAT 83 Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFD 166 G+G + LA+ K+ K DIS AL A NA N + + S+WFS+V F+ Sbjct: 84 GSGFIALAIKKKFSSAKIYASDISKIALRQASKNAQINKLD--IGLIHSNWFSNVNQKFN 141 Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE 226 +I+ NPPYI + L ++ ++P+ +L DG Y+ I ++L + L E Sbjct: 142 LIICNPPYIGK--YEELSESIKKYEPKKALYAKDDGFYFYKKIISQAPKYLQNEKLLIFE 199 Query: 227 IG 228 + Sbjct: 200 LS 201 >gi|319955750|ref|YP_004167017.1| protein-(glutamine-n5) methyltransferase, release factor-specific [Cellulophaga algicola DSM 14237] gi|319424410|gb|ADV51519.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Cellulophaga algicola DSM 14237] Length = 283 Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 70/249 (28%), Positives = 118/249 (47%), Gaps = 10/249 (4%) Query: 16 GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75 GL + ++P+ ++ L A+ + H + I+G +F ++ ++ PR Sbjct: 36 GLQRFVLAMEPNLIVAKEDESPLFEALSKLKLHVPVQYIIGKTEFMDLEFIVNEHVLIPR 95 Query: 76 PETELLVDSALAFSLPRIE-KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134 PETE LV L IE ++ILD+GTG+G + ++L K P K +D+S KA+ Sbjct: 96 PETEELVRWILG----DIEDHHSKLKILDIGTGSGCIPISLAKHLPNSKVYTLDVSGKAI 151 Query: 135 EIAKSNAVTNGVSERFDTLQSDWF--SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDP 192 +AK NA N V+ D +Q +++ FD+IVSNPPY+ + + V ++P Sbjct: 152 AVAKQNARLNKVA--IDFIQESILDIETLQEEFDIIVSNPPYVRELEKAAMNANVLKYEP 209 Query: 193 RISL-DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK 251 ++L + L Y+ I D + +L K G EI + + + + Sbjct: 210 GLALFVADNNPLLFYKKITDFAAHNLVKKGKLYFEINQYLGKETELLLGEHNFSDIELRQ 269 Query: 252 DYGGNDRVL 260 D GNDR+L Sbjct: 270 DVFGNDRML 278 >gi|262195717|ref|YP_003266926.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Haliangium ochraceum DSM 14365] gi|262079064|gb|ACY15033.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Haliangium ochraceum DSM 14365] Length = 288 Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 74/258 (28%), Positives = 125/258 (48%), Gaps = 9/258 (3%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 ++ L V G ++ +D + L D + I R L E + ++G ++F+++ Sbjct: 29 EAQVLLAHVLGCDRTRLYMDFEKPLGDDELASYRGLIQRRLSGEPVAYLVGHQEFWSLSF 88 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALLKESPFFKG 124 + + PR +TE +++ L +I RD +RI D+ TG+GA+ + L E P Sbjct: 89 QVGPEVLIPRRDTETVIEQVLD----QIGARDAALRIADVATGSGAIAITLAHELPSASV 144 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVDC 182 + D+S A +A NA N V R + D + + E FDV+VSN PY+ + ++ Sbjct: 145 IATDLSQAAAAMATDNAARNQVDARVEVRVGDLLAPLAGEAPFDVLVSNLPYVPAGDIEG 204 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 L EV+ +PR++LDGG DGL R + L+ GL +E G++Q V + ++ Sbjct: 205 LAPEVQR-EPRLALDGGDDGLHLLRRLIADAPALLSDTGLLVLEHGFDQDAAVRALIDAT 263 Query: 243 KLFLVNAFK-DYGGNDRV 259 F + D G RV Sbjct: 264 GAFEPAQTRLDLGKQPRV 281 >gi|260814059|ref|XP_002601733.1| hypothetical protein BRAFLDRAFT_215391 [Branchiostoma floridae] gi|229287035|gb|EEN57745.1| hypothetical protein BRAFLDRAFT_215391 [Branchiostoma floridae] Length = 287 Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 69/230 (30%), Positives = 115/230 (50%), Gaps = 20/230 (8%) Query: 44 RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAF---SLPRIEKRDVVR 100 + + I ILG DF ++ L + F PRPETE LV+ + L R E+ + Sbjct: 63 KRMNRMPIQYILGEWDFRDLNLVMRPPVFIPRPETEELVEHLWLYLQEDLSREEEE--LG 120 Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS- 159 IL++G G+GA+ L+LL E P VD++ +A+E+ + NA G+ +R + ++ S Sbjct: 121 ILEVGCGSGAISLSLLHEFPQAHCTAVDVTKEAVELTQHNAERLGLCDRLNIIKFIVLSL 180 Query: 160 -------SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212 E FDVIVSNPPYI + + L E+ ++ +L GG DG+ R I Sbjct: 181 NDIVFPADFETKFDVIVSNPPYIWTQDMGTLEQEIVGYENHCALHGGTDGMGLIRDIIHT 240 Query: 213 VSRHLNKDGLCSVEIGYNQKVDVVRIFESR----KLFLVNAFKDYGGNDR 258 + L G +E+ + D+++ + + +L L ++D+ N+R Sbjct: 241 GHKLLKPGGSIWLEVD-PRHPDMIQTYLNNHLQYQLHLAGVYQDF--NER 287 >gi|260440119|ref|ZP_05793935.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Neisseria gonorrhoeae DGI2] gi|291043407|ref|ZP_06569128.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Neisseria gonorrhoeae DGI2] gi|291012643|gb|EFE04628.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Neisseria gonorrhoeae DGI2] Length = 303 Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 54/144 (37%), Positives = 80/144 (55%), Gaps = 2/144 (1%) Query: 91 PRIEKRDVVR-ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 P IE ++V LDL TG+G + + + P + VD+S ALE+A N G+ ER Sbjct: 127 PWIEYDELVHNALDLCTGSGCLAIQMAYHYPDAQIDAVDVSLDALEVAGINIEDYGLEER 186 Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209 + +D F +EG +D+IVSNPPY+++ V L E +P ++L G DGL R I Sbjct: 187 IQLIHTDLFEGLEGTYDLIVSNPPYVDAESVGALPEEYL-HEPELALGSGADGLDVTRQI 245 Query: 210 ADGVSRHLNKDGLCSVEIGYNQKV 233 ++ LN G+ VEIG+N+ V Sbjct: 246 LLNAAKFLNPKGVLLVEIGHNRDV 269 >gi|111018483|ref|YP_701455.1| HemK family methyltransferase [Rhodococcus jostii RHA1] gi|110818013|gb|ABG93297.1| probable methyltransferase, HemK family protein [Rhodococcus jostii RHA1] Length = 309 Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 78/246 (31%), Positives = 115/246 (46%), Gaps = 17/246 (6%) Query: 27 DSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL 86 +SV+D ++ A K + ILG ++ + + F PRPETELL+ AL Sbjct: 52 ESVIDAYKKMVDQRA-----KRIPLQYILGTAAMGDIDIEVGPGVFVPRPETELLLGWAL 106 Query: 87 AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146 AF L ++ V +LDL TG+GA+ LA+ P V++ AL A+ NA Sbjct: 107 AF-LGSCDQHPPV-VLDLCTGSGALALAIANARPDAVVHAVELEPHALAWARRNADAREQ 164 Query: 147 SE-------RFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199 + + D + +EG D+IV+NPPYI + L EV D DP +L G Sbjct: 165 AGDAPIRLYQGDVTDRTLLAGLEGGVDLIVANPPYIPEGVE--LEPEVADHDPHSALFAG 222 Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF-LVNAFKDYGGNDR 258 DGLS + + V+R L G +E + DV +F SR++F V D G R Sbjct: 223 PDGLSVIKPMISNVARWLRIGGAVGIEHDDSNGADVAALFASRRVFGEVAEHPDLAGKPR 282 Query: 259 VLLFCR 264 ++ R Sbjct: 283 FVVARR 288 >gi|153937927|ref|YP_001389501.1| HemK family modification methylase [Clostridium botulinum F str. Langeland] gi|152933823|gb|ABS39321.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Clostridium botulinum F str. Langeland] gi|295317602|gb|ADF97979.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Clostridium botulinum F str. 230613] Length = 283 Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 70/258 (27%), Positives = 118/258 (45%), Gaps = 7/258 (2%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L ++ ++ +PD + + ++ I I ILG +F + Sbjct: 25 DAQLLLGKILKKDRLFILTNPDYHIKEEEKEKYFQLIDLRKNKMPIKYILGTTEFMGLDF 84 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 + PRP+TE+LV++ L I+ ++ +I D+ G+G + + + + + Sbjct: 85 NIKKGVLIPRPDTEILVETVLE----EIKNKNYKQICDVCCGSGIIGITIGYTLNNTEII 140 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIVDC 182 DI K N + + + +R L+SD + + FD+IVSNPPYI +++ Sbjct: 141 CYDIEDIPYNTTKENILKHNLQDRVKALKSDLLTEAIKEKRRFDLIVSNPPYIREDVIET 200 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 L +V+ ++P +L GG DGL Y I LN G + EIGY+QK+ V I Sbjct: 201 LMDDVKKYEPFEALCGGKDGLFFYEGIIKQSLEVLNDGGTIAFEIGYDQKIQVSHILNEY 260 Query: 243 KLFLVNAFKDYGGNDRVL 260 V KD G DRV+ Sbjct: 261 GFKDVLCIKDLAGKDRVI 278 >gi|313679786|ref|YP_004057525.1| protein-(glutamine-n5) methyltransferase, release factor-specific [Oceanithermus profundus DSM 14977] gi|313152501|gb|ADR36352.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Oceanithermus profundus DSM 14977] Length = 277 Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 64/206 (31%), Positives = 100/206 (48%), Gaps = 8/206 (3%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 QA ++ L TG + + + L+ Q L A+ R E + ILG F Sbjct: 23 QAEAEARQLLEHATGAQGARFWREARAALEPAQERLLEEALARRAAGEPLQLILGTAVFC 82 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 + L + PRPETE LV+ +L R+ + R+LD+GTG GA+ LAL + P Sbjct: 83 GLELEVRPGVLVPRPETERLVE----LALERLPESGPARVLDVGTGGGAIALALKQARPE 138 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181 ++S ALE+A++NA G++ F L + + + L D+IVSNPPY+ + Sbjct: 139 LDVYASEVSEAALELARANARRLGLAVTF--LHAPLTAGLWDL-DLIVSNPPYLPEAYRE 195 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYR 207 E+ ++ +L G DGL+ R Sbjct: 196 AAPPEL-AWEAETALYAGADGLAVAR 220 >gi|15639046|ref|NP_218492.1| protoporphyrinogen oxidase (hemK) [Treponema pallidum subsp. pallidum str. Nichols] gi|189025286|ref|YP_001933058.1| protoporphyrinogen oxidase [Treponema pallidum subsp. pallidum SS14] gi|3322310|gb|AAC65048.1| protoporphyrinogen oxidase (hemK) [Treponema pallidum subsp. pallidum str. Nichols] gi|189017861|gb|ACD70479.1| protoporphyrinogen oxidase [Treponema pallidum subsp. pallidum SS14] Length = 348 Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 68/240 (28%), Positives = 110/240 (45%), Gaps = 38/240 (15%) Query: 58 RDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR------------DVVRILDLG 105 ++F+ +R ++ T P+P+TELLV+S LA ++ K V++I + Sbjct: 94 KEFFGLRFRVTRATLIPKPDTELLVESVLAHVASQMMKPRSVSVHKDTSALPVLKIFEAC 153 Query: 106 TGTGAVCLALL-----KESPFFKGVGVDISCKALEIAKSNA---VTNGVSERFDTLQSD- 156 TG G + +AL+ + +P + DI +AL +A+ NA + + R + +D Sbjct: 154 TGCGCIAIALMHMLRARGTPPLYVIASDICMRALAVARYNARRLLDVSANSRVRFVHADV 213 Query: 157 -----WFSSVEGL-----------FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200 +FS EG +DVI +NPPY+ S L + R +P +LDGG Sbjct: 214 RAPIPFFSPSEGTDVVQERGVCVPYDVICANPPYVPSAQARALLQDGRG-EPLGALDGGA 272 Query: 201 DGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 DGL R A + L + G E+G N RIF++ V KD G +R++ Sbjct: 273 DGLDLVRAFAHHSAAALKEGGCVFCEVGSNHAQRAARIFQAAGFATVKISKDLSGKERLI 332 >gi|291059467|gb|ADD72202.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Treponema pallidum subsp. pallidum str. Chicago] Length = 338 Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 68/240 (28%), Positives = 110/240 (45%), Gaps = 38/240 (15%) Query: 58 RDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR------------DVVRILDLG 105 ++F+ +R ++ T P+P+TELLV+S LA ++ K V++I + Sbjct: 84 KEFFGLRFRVTRATLIPKPDTELLVESVLAHVASQMMKPRSVSVHKDTSALPVLKIFEAC 143 Query: 106 TGTGAVCLALL-----KESPFFKGVGVDISCKALEIAKSNA---VTNGVSERFDTLQSD- 156 TG G + +AL+ + +P + DI +AL +A+ NA + + R + +D Sbjct: 144 TGCGCIAIALMHMLRARGTPPLYVIASDICMRALAVARYNARRLLDVSANSRVRFVHADV 203 Query: 157 -----WFSSVEGL-----------FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200 +FS EG +DVI +NPPY+ S L + R +P +LDGG Sbjct: 204 RAPIPFFSPSEGTDVVQERGVCVPYDVICANPPYVPSAQARALLQDGRG-EPLGALDGGA 262 Query: 201 DGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 DGL R A + L + G E+G N RIF++ V KD G +R++ Sbjct: 263 DGLDLVRAFAHHSAAALKEGGCVFCEVGSNHAQRAARIFQAAGFATVKISKDLSGKERLI 322 >gi|318061362|ref|ZP_07980083.1| methytransferase [Streptomyces sp. SA3_actG] Length = 314 Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 65/214 (30%), Positives = 98/214 (45%), Gaps = 5/214 (2%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101 + R + E + ++G F+ +R+ + F PR +E LV ALA + V + Sbjct: 50 VARRVAGEPLEHVVGHAVFHGLRIAVGPGVFVPRRRSEFLVARALAG----VRAEGAVTL 105 Query: 102 LDLGTGTGAVCLALLKE-SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 LDL G+GA+ LAL P D+ AL A+ N G L + ++ Sbjct: 106 LDLCCGSGALGLALRTALGPRATLHAADVDPGALRWARRNLAPVGAHVHEGDLYAPLPAA 165 Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220 + G DV+ +N PY+ S V L E R +P ++LDGG DGL R +A+ + L Sbjct: 166 LRGRVDVLTANVPYVPSEEVRLLPAEARAHEPLVALDGGTDGLDLVRRVAEEAATWLAPG 225 Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYG 254 G VE G Q +V IF + L A ++ G Sbjct: 226 GRLLVESGERQAPEVAGIFMAAGLHAEIAHEEEG 259 >gi|241760258|ref|ZP_04758353.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Neisseria flavescens SK114] gi|241319136|gb|EER55614.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Neisseria flavescens SK114] Length = 299 Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 52/144 (36%), Positives = 84/144 (58%), Gaps = 2/144 (1%) Query: 91 PRIEKRDVV-RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 P IE ++V R LDL TG+G + + + P + VD+S ALE+A N G+ +R Sbjct: 123 PWIEHDELVHRALDLCTGSGCLAIQMAHHYPDAQIDAVDLSLDALEVAAINIEDYGLEDR 182 Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209 + +D F ++ +D+IVSNPPY+++ V+ L E +P+++L G DGL R I Sbjct: 183 ISLVHTDLFEGLDETYDLIVSNPPYVDAESVEALPDEYL-HEPKLALGSGEDGLDATRQI 241 Query: 210 ADGVSRHLNKDGLCSVEIGYNQKV 233 +++LN G+ VEIG+N++V Sbjct: 242 ILQAAKYLNPKGVLLVEIGHNREV 265 >gi|296331339|ref|ZP_06873811.1| glutamine methylase of release factor 1 (and perhaps others) at a GGQ site [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305676325|ref|YP_003867997.1| glutamine methylase [Bacillus subtilis subsp. spizizenii str. W23] gi|296151454|gb|EFG92331.1| glutamine methylase of release factor 1 (and perhaps others) at a GGQ site [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305414569|gb|ADM39688.1| glutamine methylase of release factor 1 (and perhaps others) at a GGQ site [Bacillus subtilis subsp. spizizenii str. W23] Length = 288 Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 75/248 (30%), Positives = 112/248 (45%), Gaps = 13/248 (5%) Query: 24 VDPDSVLDDRQRFFLTNAIVRSLKHESIHR-------ILGWRDFYNVRLTLSSDTFEPRP 76 +D +L Q + + R +H +H+ I+G FY ++ D PRP Sbjct: 35 MDRSKLLASLQEPIGEDELYRFKRHVEMHKEGVPVQYIIGKEFFYGREFMVNDDVLIPRP 94 Query: 77 ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136 ETE +V L + + ++D+GTG+GA+ + L E+ F VDIS +AL++ Sbjct: 95 ETEEVVYHLLEKYRHVFSEDSRLEVVDVGTGSGAIAVTLALENKNFSVSAVDISKEALQV 154 Query: 137 AKSNAVTNGVSERFDTLQSDWFSSV--EG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPR 193 A +NA T G F Q D EG D++VSNPPYI + L VR +P Sbjct: 155 ASANAETLGADVHF--YQGDLLEPFIKEGKKADIVVSNPPYISEGEMADLSEIVRFHEPL 212 Query: 194 ISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR-IFESRKLFLVNAFKD 252 +L G DGL Y+ + + + EIG+ Q V I ++ K V KD Sbjct: 213 HALTDGGDGLKFYKRFMEDIPLVMKDKVFVVFEIGWQQGAAVKELILKTFKGAEVEVLKD 272 Query: 253 YGGNDRVL 260 G DR + Sbjct: 273 INGKDRTI 280 >gi|300088067|ref|YP_003758589.1| protein-(glutamine-N5) methyltransferase [Dehalogenimonas lykanthroporepellens BL-DC-9] gi|299527800|gb|ADJ26268.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Dehalogenimonas lykanthroporepellens BL-DC-9] Length = 273 Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 65/235 (27%), Positives = 107/235 (45%), Gaps = 11/235 (4%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 ++ + +TGL+ + P+ L + + R E + + G +FY + Sbjct: 22 EAEILIAHITGLTRAGIHAHPERELTAAEEARYRALLERLSAGEPLQYLTGKMEFYGLEF 81 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 ++ PRPETE++ + AL + + D I D+G G+GA+ + L P Sbjct: 82 EVNPSVLVPRPETEIMAERALNIA----KGYDRPAIADIGCGSGALAVTLAVRLPRSTVT 137 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLG 184 DIS ALE A+ NAV + V+ +S+ S + L FD+I +N PY+ S V Sbjct: 138 AADISPTALETARRNAVRHHVAN-IGFRKSELLSGLTDLNFDIICANLPYVPSAEVSA-- 194 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 F+PR++LDGG DGL R + ++ + +E G Q V R+ Sbjct: 195 ---NRFEPRLALDGGTDGLDLIRRLLAQIAGLPRRPDWLLLEFGTGQAAGVKRLI 246 >gi|311694730|gb|ADP97603.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [marine bacterium HP15] Length = 300 Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 69/205 (33%), Positives = 102/205 (49%), Gaps = 9/205 (4%) Query: 27 DSVLDDRQRFFLTNAIVRSLKHE-SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85 D+ L +R + I R + + +LG F + + PR L+++ Sbjct: 60 DARLTREERELVLERIARRVDERVPLAYLLGEAWFMGMPFHVDERVLVPRSPIGELIENG 119 Query: 86 LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG--VDISCKALEIAKSNAVT 143 P + + V RILDL TG+G C+ + S F + DIS ALE+A+SN Sbjct: 120 FQ---PWLGDKPVERILDLCTGSG--CIGIGAASVFGEAEVDLSDISPDALEVAESNIDL 174 Query: 144 NGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203 +GV ER T+QSD F ++EG +DVIVSNPPY+++ + + E R +P + L G DGL Sbjct: 175 HGVRERVRTVQSDVFDNIEGRYDVIVSNPPYVDADDLSSMPDEYR-HEPELGLAAGKDGL 233 Query: 204 SHYRTIADGVSRHLNKDGLCSVEIG 228 I + HL GL VE+G Sbjct: 234 DIAHRIIAKAAEHLTPGGLLVVEVG 258 >gi|187777271|ref|ZP_02993744.1| hypothetical protein CLOSPO_00823 [Clostridium sporogenes ATCC 15579] gi|187774199|gb|EDU38001.1| hypothetical protein CLOSPO_00823 [Clostridium sporogenes ATCC 15579] Length = 292 Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 67/242 (27%), Positives = 116/242 (47%), Gaps = 7/242 (2%) Query: 22 VIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELL 81 ++ +PD + + ++ I + ILG +F + + PRP+TE+L Sbjct: 50 ILTNPDYHIKEEEKKKYFQLIDLRKNKMPMKYILGTTEFMGLDFNIKKGVLIPRPDTEIL 109 Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 V++ L I+ ++ +I D+ G+G + + + + + DI K N Sbjct: 110 VETVLE----EIKNKNYKQICDVCCGSGIIGITIGYTLNNTEIICYDIEDVPYNTTKENI 165 Query: 142 VTNGVSERFDTLQSDWFS-SVEGL--FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG 198 + + + +R L+SD + +++G FD+IVSNPPYI +++ L +V+ ++P +L G Sbjct: 166 LKHNLQDRIKVLKSDLLTEAIKGKRKFDIIVSNPPYIREDVIETLMDDVKKYEPFEALCG 225 Query: 199 GIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258 G DGL Y I LN G + EIGY+QK+ V I + KD G DR Sbjct: 226 GKDGLFFYEGIIKQSLEVLNDGGTIAFEIGYDQKIQVSHILHEYGFKDILCIKDLAGKDR 285 Query: 259 VL 260 V+ Sbjct: 286 VI 287 >gi|170756524|ref|YP_001779765.1| HemK family modification methylase [Clostridium botulinum B1 str. Okra] gi|169121736|gb|ACA45572.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Clostridium botulinum B1 str. Okra] Length = 283 Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 71/258 (27%), Positives = 118/258 (45%), Gaps = 7/258 (2%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L +V ++ +PD + + ++ I I ILG +F + Sbjct: 25 DAQLLLGKVLKKDRLFILTNPDYHIKEEEKEKYFQLIDLRKDKMPIKYILGTTEFMGLDF 84 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 + PRP+TE+LV++ L I+ ++ +I D+ G+G + + + + + Sbjct: 85 NIKKGVLIPRPDTEILVETVLE----EIKNKNYKQICDVCCGSGIIGITIGYTLNNTEII 140 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIVDC 182 DI K N + + + +R L+SD + + FD+IVSNPPYI +++ Sbjct: 141 CYDIEDIPYNTTKENILKHNLEDRVKVLKSDLLTEAIKEKRRFDLIVSNPPYIREDVIET 200 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 L +V+ ++P +L GG DGL Y I LN G + EIGY+QK+ V I Sbjct: 201 LMDDVKKYEPFEALCGGKDGLFFYEGIIKQSLEVLNDGGTIAFEIGYDQKIQVSHILNEY 260 Query: 243 KLFLVNAFKDYGGNDRVL 260 V KD G DRV+ Sbjct: 261 GFKDVLCIKDLAGKDRVI 278 >gi|226354990|ref|YP_002784730.1| hypothetical protein Deide_01670 [Deinococcus deserti VCD115] gi|226316980|gb|ACO44976.1| putative methyltransferase, HemK family [Deinococcus deserti VCD115] Length = 284 Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 71/224 (31%), Positives = 108/224 (48%), Gaps = 11/224 (4%) Query: 6 DSHSFLCRVTGLSSHQVIV-DPDSVL-DDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63 D+ + L GLS +++ P+ VL DD R L + + + +LG ++ V Sbjct: 26 DARALLEHALGLSPTGLLLRGPEQVLPDDAAR--LNGLLEKRAARVPLQHLLGEVEWGGV 83 Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 L + PRPETE L L SL + + R+LD+GTG+GA+ L L P + Sbjct: 84 HLRSDTRALIPRPETEWL----LHLSLQDLSAVSLPRVLDVGTGSGALALGLKAARPDAQ 139 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183 DIS +AL +A+ N+ NG+ F +Q + + G FD+IVSNPPY+ Sbjct: 140 VWATDISPEALTLAQENSARNGLEVTF--VQGSLLAGLAGPFDLIVSNPPYLPESDRLEA 197 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227 EV+ DP ++L G DGL R +A + L +E+ Sbjct: 198 DPEVK-HDPALALYAGTDGLELARPLAAQAAGALTPGAPLWLEL 240 >gi|226947361|ref|YP_002802452.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Clostridium botulinum A2 str. Kyoto] gi|226841044|gb|ACO83710.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Clostridium botulinum A2 str. Kyoto] Length = 283 Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 70/258 (27%), Positives = 118/258 (45%), Gaps = 7/258 (2%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L ++ ++ +PD + + ++ I I ILG +F + Sbjct: 25 DTQLLLGKILKKDRLFILTNPDYHIKEEEKEKYFQLIDLRKNKMPIKYILGTTEFMRLDF 84 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 + PRP+TE+LV++ L I+ ++ +I D+ G+G + + + + + Sbjct: 85 NIKKGVLIPRPDTEILVETVLE----EIKNKNYKQICDVCCGSGIIGITIGYTLNNTEII 140 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIVDC 182 DI K N + + + +R L+SD + + FD+IVSNPPYI +++ Sbjct: 141 CYDIEDIPYNTTKENILKHNLQDRVKALKSDLLTEAIKEKRRFDLIVSNPPYIREDVIET 200 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 L +V+ ++P +L GG DGL Y I LN G + EIGY+QK+ V I Sbjct: 201 LMDDVKKYEPFEALCGGKDGLFFYEGIIKQSLEVLNDGGTIAFEIGYDQKIQVSHILNEY 260 Query: 243 KLFLVNAFKDYGGNDRVL 260 V KD G DRV+ Sbjct: 261 GFKDVLCIKDLAGKDRVI 278 >gi|163840179|ref|YP_001624584.1| peptide release factor-glutamine N5-methyltransferase [Renibacterium salmoninarum ATCC 33209] gi|162953655|gb|ABY23170.1| peptide release factor-glutamine N5-methyltransferase [Renibacterium salmoninarum ATCC 33209] Length = 300 Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 72/214 (33%), Positives = 105/214 (49%), Gaps = 10/214 (4%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110 + + G F ++ L + F PRPE+E + A+ F ++E V ++DLGTG+GA Sbjct: 72 LQHLTGVAYFRHLELAVGPGVFIPRPESEGVAQLAINFLAAQVELTAPV-VVDLGTGSGA 130 Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG--VSERFDTLQSDWFSSVEGLFDVI 168 + A+ E P + V++S A + A N G V R L+S F ++GL DV+ Sbjct: 131 LAAAIASEVPGSRVFAVELSDLAHDWAARNLARYGAQVELRLGDLRSA-FEDLDGLADVV 189 Query: 169 VSNPPYI--ESVIVDCLGLEVRDFDPRISLDGG-IDGLSHYRTIADGVSRHLNKDGLCSV 225 +SNPPYI E+V + EV + DP I+L GG DGL R R L GL + Sbjct: 190 LSNPPYIPDEAVPNEP---EVAEHDPEIALYGGWADGLELPRAALASAVRLLKPGGLFVM 246 Query: 226 EIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRV 259 E Q +VR+FE+ V D G +R Sbjct: 247 EHAEVQAATMVRLFENAGFGYVEGHLDLTGKERA 280 >gi|226323867|ref|ZP_03799385.1| hypothetical protein COPCOM_01642 [Coprococcus comes ATCC 27758] gi|225207416|gb|EEG89770.1| hypothetical protein COPCOM_01642 [Coprococcus comes ATCC 27758] Length = 128 Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 48/116 (41%), Positives = 70/116 (60%), Gaps = 2/116 (1%) Query: 145 GVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204 GVS ++ +Q+D F ++ G FD+I SNPPYI + +++ L EVR DP +LDG DGL Sbjct: 6 GVSGKW--IQTDMFENITGTFDMITSNPPYIPTKVIEELEAEVRLHDPYEALDGKEDGLY 63 Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 YR +A+ V +L G +EIGY+Q DV ++ + V+ KD G DRV+ Sbjct: 64 FYRILAEKVPEYLTDGGWLVMEIGYDQSADVEKLLKETGFEQVSTQKDLAGLDRVV 119 >gi|63852198|dbj|BAD98450.1| HemK protein [Desulfovibrio vulgaris] Length = 335 Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 79/266 (29%), Positives = 110/266 (41%), Gaps = 56/266 (21%) Query: 49 ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108 E ILG R+FY ++ T PRPETELLV++AL+ + PR D GTGT Sbjct: 72 EPTAHILGEREFYGRDFLVTPATLIPRPETELLVETALSLA-PR-----TAFFADCGTGT 125 Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN------------------------ 144 G + L E +G+ DIS AL +A N VT+ Sbjct: 126 GCIAATLCAERDDLRGMACDISPDALAVAARNIVTHLGGAMEPTVAGDSRNAADNAPTSQ 185 Query: 145 --------GVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194 +R + +D+ + +G D++VSNPPY+ L EVRD +PR Sbjct: 186 NAQSAARRAAFQRCQPVLADFTRPLFRDGALDLLVSNPPYVSEAEHADLTPEVRDREPRS 245 Query: 195 SL--------------DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 +L G DGL H R + R L GL +E G Q V +F+ Sbjct: 246 ALVPCAGEGLDDAAAAQGRADGLGHARILVAEAGRVLRPGGLFLMEFGSAQGQAVAELFQ 305 Query: 241 --SRKLFLVNAFKDYGGNDRVLLFCR 264 SR V+ +D DR ++ R Sbjct: 306 PCSRLWAQVDIRRDLARLDRYVVARR 331 >gi|227889714|ref|ZP_04007519.1| possible N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Lactobacillus johnsonii ATCC 33200] gi|227849578|gb|EEJ59664.1| possible N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Lactobacillus johnsonii ATCC 33200] Length = 287 Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 66/199 (33%), Positives = 106/199 (53%), Gaps = 16/199 (8%) Query: 50 SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109 S ILG+ FY ++ ++ PR ETE LV ++L IE +ILDLGTG+G Sbjct: 67 SPQYILGYAWFYGYKILVNRGVLIPRFETEELV----KWALENIESGK--KILDLGTGSG 120 Query: 110 AVCLALLKESPFFKGV------GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG 163 A+ +AL+K++ +G+ DI+ AL ++ N + + + T +++ +E Sbjct: 121 AIMVALVKQAQK-QGIQNLNLYASDITDSALRESEENFLKYDLDVK--TRKANVLVGLEK 177 Query: 164 LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223 FD+I+SNPPYI+ + + V +P +L GG DGL YR A V HLN G Sbjct: 178 -FDMIISNPPYIKMSEKNLMDENVIKNEPDTALYGGEDGLDFYRKFAKQVQSHLNPQGQF 236 Query: 224 SVEIGYNQKVDVVRIFESR 242 +E G+++K + +FE+ Sbjct: 237 FLEFGFSEKEQLKELFETE 255 >gi|295836497|ref|ZP_06823430.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptomyces sp. SPB74] gi|197699009|gb|EDY45942.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptomyces sp. SPB74] Length = 281 Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 73/243 (30%), Positives = 109/243 (44%), Gaps = 17/243 (6%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ V + ++ PD+ D R AI R E + I G F + L Sbjct: 26 DAEELAAYVHDVKRGELHTVPDADFDAR----YWEAIARREAREPLQHITGRAYFRYLEL 81 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR--ILDLGTGTGAVCLALLKESPFFK 123 + F PRPETE S + +++ + DVV ++DL TG+GA+ LAL +E P Sbjct: 82 QVGPGVFVPRPETE----SVVGWAIDAVRAMDVVEPLVVDLCTGSGAIALALAQEVPRST 137 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIV 180 V++S AL + N + R Q D F+++ +G D+++SNPPYI Sbjct: 138 VHAVELSEDALVWTRRNVEGS----RVHLHQGDAFAALPELDGQVDLVISNPPYIPLTEW 193 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 + + E RD DP ++L G DGL R I R L G+ VE Q V +F Sbjct: 194 EYVAPEARDHDPEMALFSGEDGLDTIRRIERTAHRLLRPGGVVVVEHADTQGGQVPWLFT 253 Query: 241 SRK 243 + Sbjct: 254 EER 256 >gi|53711799|ref|YP_097791.1| putative protoporphyrinogen oxidase [Bacteroides fragilis YCH46] gi|52214664|dbj|BAD47257.1| putative protoporphyrinogen oxidase [Bacteroides fragilis YCH46] Length = 278 Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 77/259 (29%), Positives = 119/259 (45%), Gaps = 16/259 (6%) Query: 12 CRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDT 71 C + G + + D L ++ L + + R K+E I I G FY ++ Sbjct: 30 CDLLGQDAIDYYLGKDITLSANEQCDLESIVERLKKNEPIQYIQGETCFYGSMFRVAPGV 89 Query: 72 FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131 PRPETE LVD + E R+LD+GTG+G + ++L K P D+S Sbjct: 90 LIPRPETEELVDLVVK------EAATGTRLLDIGTGSGCIAISLAKHIPQAVVTAWDVSE 143 Query: 132 KALEIAKSN--AVTNGVS-ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVR 188 +AL IA N + GV E+ D L ++ + +D+IVSNPPY+ + + V Sbjct: 144 EALAIAGENNRELKAGVHFEKMDVLSAEPVDDDQ--YDMIVSNPPYVTESEKNEMEPNVL 201 Query: 189 DFDPRISL---DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245 D++PR++L D D L YR IA + L G EI +V+++ + Sbjct: 202 DWEPRLALFVPDN--DPLRFYRRIASLGRKMLRLHGRLYFEINRAYGEEVLQMLHEQGYE 259 Query: 246 LVNAFKDYGGNDRVLLFCR 264 + KD GNDR++ R Sbjct: 260 ELRLIKDISGNDRIVTAKR 278 >gi|302542527|ref|ZP_07294869.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptomyces hygroscopicus ATCC 53653] gi|302460145|gb|EFL23238.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptomyces himastatinicus ATCC 53653] Length = 281 Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 66/207 (31%), Positives = 100/207 (48%), Gaps = 9/207 (4%) Query: 40 NAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV 99 A+ R E + I G F + L + F PRPETE S + +++ + DVV Sbjct: 56 EAVARREAREPLQHITGRAFFRYLELQVGPGVFVPRPETE----SVVGWAIDAVRAMDVV 111 Query: 100 R--ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSD 156 I+DL TG+GA+ LAL +E P + V++ AL A+ N + V +R D L + Sbjct: 112 EPLIVDLCTGSGAIALALAQEVPRSRVHAVELDEGALLWARKNVEGSRVVLQRGDALTA- 170 Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216 ++G D+++SNPPYI + + E RD DP+++L G DGL R + R Sbjct: 171 -LPELDGQVDLVISNPPYIPLTEWEYVAPEARDHDPQLALFSGEDGLDVIRGLERTAHRL 229 Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRK 243 L G+ +E Q V IF + Sbjct: 230 LRPGGVVVIEHADTQGGQVPWIFTEER 256 >gi|315126139|ref|YP_004068142.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Pseudoalteromonas sp. SM9913] gi|315014653|gb|ADT67991.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Pseudoalteromonas sp. SM9913] Length = 311 Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 65/176 (36%), Positives = 94/176 (53%), Gaps = 8/176 (4%) Query: 55 LGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV-RILDLGTGTGAVCL 113 + W F N+ + PR L+++ P +EK + V RILDL TG+G + + Sbjct: 101 IAW--FANMPFYVDERVLIPRSPFAELINNRFT---PWLEKPESVGRILDLCTGSGCIAI 155 Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNP 172 AL + + VDIS +ALE+A N +S+R +QSD FS V G +D+IV+NP Sbjct: 156 ALAQAFENAQVDAVDISYEALEVADINITDYQLSDRVLPIQSDVFSGVPGQKYDLIVANP 215 Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228 PY+++ + L E +P + L G DGL RTI D S HL +GL VE+G Sbjct: 216 PYVDAEDMADLPREFH-HEPELGLASGHDGLDVTRTILDQASEHLTDNGLLFVEVG 270 >gi|300741301|ref|ZP_07071322.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Rothia dentocariosa M567] gi|300380486|gb|EFJ77048.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Rothia dentocariosa M567] Length = 313 Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 67/224 (29%), Positives = 108/224 (48%), Gaps = 10/224 (4%) Query: 39 TNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV 98 T + R + + I G FY++ + + F PRPETELLV+ AL L E Sbjct: 88 TELLERRAQRVPLQHITGVAPFYHLEIKVGPGVFIPRPETELLVEEALRV-LATYESNAR 146 Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 R++DL TG+GA+ A+ +E+P + V++S +AL A+ N V + D Sbjct: 147 PRVVDLCTGSGAIAAAIKEENPQAEVFAVELSEQALLWARKNLDPQNVH----LIPGDIR 202 Query: 159 SSVE---GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL-DGGIDGLSHYRTIADGVS 214 +S+E G FD+++SNPPYI EV ++DP+++L GG DG+ R + Sbjct: 203 TSLEDLPGYFDLVLSNPPYIPP-HRKPQAPEVAEYDPQMALYGGGEDGMEIPREVIARAH 261 Query: 215 RHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258 L G +E +Q+ V ++ + + +D G R Sbjct: 262 YLLRPGGFFMMEHDDSQETRVAETLAAQGFVSIYSIRDLNGKPR 305 >gi|218886540|ref|YP_002435861.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218757494|gb|ACL08393.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 369 Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 79/266 (29%), Positives = 110/266 (41%), Gaps = 56/266 (21%) Query: 49 ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108 E ILG R+FY ++ T PRPETELLV++AL+ + PR D GTGT Sbjct: 106 EPTAHILGEREFYGRDFLVTPATLIPRPETELLVETALSLA-PR-----TAFFADCGTGT 159 Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN------------------------ 144 G + L E +G+ DIS AL +A N VT+ Sbjct: 160 GCIAATLCAERDDLRGMACDISPDALAVAARNIVTHLGGAMEPTVAGDSRNAADNAPTSQ 219 Query: 145 --------GVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194 +R + +D+ + +G D++VSNPPY+ L EVRD +PR Sbjct: 220 NAQSAARRAAFQRCQPVLADFTRPLFRDGALDLLVSNPPYVSEAEHADLTPEVRDREPRS 279 Query: 195 SL--------------DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 +L G DGL H R + R L GL +E G Q V +F+ Sbjct: 280 ALVPCAGEGLDDAAAAQGRADGLGHARILVAEAGRVLRPGGLFLMEFGSAQGQAVAELFQ 339 Query: 241 --SRKLFLVNAFKDYGGNDRVLLFCR 264 SR V+ +D DR ++ R Sbjct: 340 PCSRLWAQVDIRRDLARLDRYVVARR 365 >gi|229489932|ref|ZP_04383785.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Rhodococcus erythropolis SK121] gi|229323033|gb|EEN88801.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Rhodococcus erythropolis SK121] Length = 310 Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 70/231 (30%), Positives = 107/231 (46%), Gaps = 12/231 (5%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101 + + +K + I+G N+ + + F PRPETELL+ AL+F K VV Sbjct: 62 VAQRVKRIPLQHIIGVASMGNIDVAVGPGVFIPRPETELLMGWALSFLEGCGSKPPVV-- 119 Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS-------ERFDTLQ 154 LDL TG+G + L++ + P V+ AL A+ NA + + D Sbjct: 120 LDLCTGSGVLALSIAEARPDAVVHAVEKEPAALVWARRNAADREAAGDTPIHLHQGDVTD 179 Query: 155 SDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214 + +EG D++VSNPPYI L EV D+DP +L GG+DGLS + + ++ Sbjct: 180 RNLLPGLEGGVDLVVSNPPYIPEGA--QLQPEVMDYDPHTALFGGVDGLSVIKPMISNIA 237 Query: 215 RHLNKDGLCSVEIGYNQKVDVVRIFESRKLF-LVNAFKDYGGNDRVLLFCR 264 R L G +E V +F +R++F V D G R ++ R Sbjct: 238 RWLRIGGAAGIEHDDTNGDGVAALFSARRVFGEVAQHPDLAGRPRFVVARR 288 >gi|114777341|ref|ZP_01452338.1| hemK protein [Mariprofundus ferrooxydans PV-1] gi|114552123|gb|EAU54625.1| hemK protein [Mariprofundus ferrooxydans PV-1] Length = 279 Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 61/188 (32%), Positives = 93/188 (49%), Gaps = 7/188 (3%) Query: 44 RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103 R L E + I G ++F++ +S D PRPETE L+++ LA P ++ + D Sbjct: 64 RRLAREPLAYITGEKEFWSRPFRVSPDVLIPRPETEHLIEAVLA-RFP--DQSAPYQFCD 120 Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE- 162 +GTG+G + + L E P DIS +L +A++NA V+ R D +++ Sbjct: 121 IGTGSGCIAVTLAAEYPHAAVTATDISEASLRMAQTNAAALNVASRLAWRSGDLLQALQP 180 Query: 163 --GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220 G FDV++SNPPY+ S + L E+ +PR +L DGL TI + L Sbjct: 181 EDGPFDVVISNPPYVSSDEMHGLEPELA-LEPRHALTDEADGLQLLATILNDAPVCLKPH 239 Query: 221 GLCSVEIG 228 G VE G Sbjct: 240 GYIIVETG 247 >gi|60680030|ref|YP_210174.1| putative protoporphyrinogen oxidase [Bacteroides fragilis NCTC 9343] gi|60491464|emb|CAH06214.1| putative protoporphyrinogen oxidase [Bacteroides fragilis NCTC 9343] Length = 278 Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 77/259 (29%), Positives = 119/259 (45%), Gaps = 16/259 (6%) Query: 12 CRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDT 71 C + G + + D L ++ L + + R K+E I I G FY ++ Sbjct: 30 CDLLGQDAIDYYLGKDITLSANEQCDLESIVERLKKNEPIQYIQGETCFYGSMFRVAPGV 89 Query: 72 FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131 PRPETE LVD + E R+LD+GTG+G + ++L K P D+S Sbjct: 90 LIPRPETEELVDLIVK------EAATGTRLLDIGTGSGCIAISLAKHIPQAVVTAWDVSE 143 Query: 132 KALEIAKSN--AVTNGVS-ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVR 188 +AL IA N + GV E+ D L ++ + +D+IVSNPPY+ + + V Sbjct: 144 EALAIAGENNRELKAGVHFEKMDVLSAEPVGDDQ--YDMIVSNPPYVTESEKNEMEPNVL 201 Query: 189 DFDPRISL---DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245 D++PR++L D D L YR IA + L G EI +V+++ + Sbjct: 202 DWEPRLALFVPDN--DPLRFYRRIASLGRKMLRLHGRLYFEINRAYGEEVLQMLHEQGYE 259 Query: 246 LVNAFKDYGGNDRVLLFCR 264 + KD GNDR++ R Sbjct: 260 ELRLIKDISGNDRIVTAKR 278 >gi|195156175|ref|XP_002018976.1| GL26107 [Drosophila persimilis] gi|194115129|gb|EDW37172.1| GL26107 [Drosophila persimilis] Length = 330 Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 69/236 (29%), Positives = 114/236 (48%), Gaps = 22/236 (9%) Query: 30 LDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFS 89 L D +RF L+H I+G DF ++ L + F PRPETE V Sbjct: 94 LADFERFLEARCARMPLQH-----IIGEWDFLDITLKTAPTVFIPRPETEEFV----RLV 144 Query: 90 LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 + + V +L++G G+GA+ L++L P + ++ S A +A NA G+ +R Sbjct: 145 IENYKNVKHVNMLEVGCGSGAMSLSILHALPRVEATAIERSKAATVLAAENAKLLGLQDR 204 Query: 150 FD----TLQSDWFSS---VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202 F T++ D + + +D+I+SNPPY+++ L EV ++ +LDGG DG Sbjct: 205 FQVHNHTMEEDQYMPEPLKDKKYDLIISNPPYVKTEEFQFLHPEVVVYENLNALDGGSDG 264 Query: 203 LSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI-----FESRKLFLVNAFKDY 253 L R + D RHL+ G +E+G N+ +V+ +E R F+ + + Y Sbjct: 265 LRVARLVFDLACRHLHSGGKLWLELG-NEHPPLVKTIMHLKYEGRLNFVGSYYDQY 319 >gi|294341236|emb|CAZ89637.1| putative Protein methyltransferase hemK (Protein-glutamine N-methyltransferase hemK) (Protein-(glutamine-N5) MTase hemK) [Thiomonas sp. 3As] Length = 306 Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 81/266 (30%), Positives = 123/266 (46%), Gaps = 16/266 (6%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ + + V G S Q P+ +LD + L R L E + +LG R+F+ + Sbjct: 20 DAQALIEAVLGWSRAQQAAHPERLLDSAELTRLQALATRLLGGEPLAYVLGEREFFGLSF 79 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 ++ D PRP+TELLV+ +L L + LD+GTG+GA+ +A+ P + Sbjct: 80 EVTPDVLIPRPDTELLVELSLRH-LDALPATHAPTALDMGTGSGAIAIAIAHARPHVRVW 138 Query: 126 GVDISCKALEIAKSNAV----TNGVSERFDTLQSDWFSSVE-----GLFDVIVSNPPYIE 176 +D S AL +A+ NA LQS+W+ +++ FD IVSNPPYI Sbjct: 139 ALDASAAALAVAQGNARRLLDARRAGGEVHFLQSNWWDALQPPATTARFDCIVSNPPYIA 198 Query: 177 SVIVDCLGLEVRDFDPRISLDG---GIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233 + L +P ++L G DGL R I R L DG +E GY+Q Sbjct: 199 AHDPHLPALR---HEPALALTGQHLNPDGLGDLRQIIAQADRFLRDDGCLLLEHGYDQAA 255 Query: 234 DVVRIFESRKLFLVNAFKDYGGNDRV 259 V + E+ V + +D G +RV Sbjct: 256 AVRDLLEAHGYREVFSARDLAGIERV 281 >gi|257457981|ref|ZP_05623140.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Treponema vincentii ATCC 35580] gi|257444694|gb|EEV19778.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Treponema vincentii ATCC 35580] Length = 318 Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 72/246 (29%), Positives = 116/246 (47%), Gaps = 27/246 (10%) Query: 41 AIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIE----KR 96 A+ R I I G +DF+ + +S D P+P+TELLV+ +LA + E Sbjct: 66 AVERRSTGLPIAYITGEKDFWGLSFKVSPDVLIPKPDTELLVERSLAVIKEKAEALRPPE 125 Query: 97 DVVRILDLGTGTGAVCLALLK--ESPFFKG---VGVDISCKALEIAKSNA---VTNGVSE 148 + +LD TG+G V +++L E+ + V VDIS AL IA+ NA ++ Sbjct: 126 QTLYLLDPCTGSGCVAISILYTLEAEGIRNIVCVAVDISPAALAIARLNAERLLSAEAQR 185 Query: 149 RFDTLQSDWFSSVEGL--------------FDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194 R ++ D S E + FD+I +NPPY+ S + L + R+ +P + Sbjct: 186 RLCFIEGDMRSLPETIGGVSQPLSVSKLLRFDLIAANPPYVPSDLTQELLKDGRN-EPAL 244 Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYG 254 +LDGG DGL R + + LN G+ E+G ++FE+ + +D Sbjct: 245 ALDGGSDGLDFIRILTNNTRTVLNGGGVLLSEVGEYHAQAASKLFETAGFSDIRIHQDLA 304 Query: 255 GNDRVL 260 G DR++ Sbjct: 305 GQDRLI 310 >gi|226226591|ref|YP_002760697.1| putative methyltransferase [Gemmatimonas aurantiaca T-27] gi|226089782|dbj|BAH38227.1| putative methyltransferase [Gemmatimonas aurantiaca T-27] Length = 326 Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 69/233 (29%), Positives = 104/233 (44%), Gaps = 16/233 (6%) Query: 41 AIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR 100 A+ R L E + G F + L + PRPETE++V AL + R Sbjct: 88 ALHRRLAGEPLAYATGSAAFRELVLQVDRRVLIPRPETEVVVGEALRVT----SMRPGGI 143 Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA------------VTNGVSE 148 +D+GTG+GA+ L+L E F + V D+S AL++AK+NA +GV+ Sbjct: 144 AIDIGTGSGAIALSLAWEGRFDRVVATDLSQDALDVAKANAERLEAMVHGSRHSPHGVAP 203 Query: 149 RFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208 L +D E V+VSNPPYI L VRD++P ++L G++ Y+ Sbjct: 204 VEFRLGADLAPVTELRARVLVSNPPYIAYDEAHALPSSVRDWEPPVALFAAEQGMARYQA 263 Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 I G L DG +E+ + + V+ D G +RVL+ Sbjct: 264 IVSGARAILEPDGWIVLELDARRAQQTAALARQAGFVDVHVIADLAGRERVLV 316 >gi|226360606|ref|YP_002778384.1| protein methyltransferase HemK [Rhodococcus opacus B4] gi|226239091|dbj|BAH49439.1| protein methyltransferase HemK [Rhodococcus opacus B4] Length = 309 Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 78/246 (31%), Positives = 115/246 (46%), Gaps = 17/246 (6%) Query: 27 DSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL 86 +SV+D ++ A K + ILG ++ + + F PRPETELL+ AL Sbjct: 52 ESVIDAYKKMVDQRA-----KRIPLQYILGTAAMGDIDIEVGPGVFVPRPETELLLGWAL 106 Query: 87 AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146 AF L ++ V +LDL TG+GA+ LA+ P V++ AL A+ NA Sbjct: 107 AF-LGSCDQHPPV-VLDLCTGSGALALAIANARPDAVVHAVELEPHALAWARRNADAREQ 164 Query: 147 SE-------RFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199 + + D + +EG D+IV+NPPYI + L EV D DP +L G Sbjct: 165 AGDAPIRLYQGDVTDRTLLAGLEGGVDLIVANPPYIPEGVE--LEPEVADHDPHSALFAG 222 Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF-LVNAFKDYGGNDR 258 DGLS + + V+R L G +E + DV +F SR++F V D G R Sbjct: 223 PDGLSVIKPMISNVARWLRIGGAVGIEHDDSNGSDVAALFASRRVFGEVAEHPDLAGKPR 282 Query: 259 VLLFCR 264 ++ R Sbjct: 283 FVVARR 288 >gi|296170241|ref|ZP_06851834.1| protein-(glutamine-N5) methyltransferase [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295895117|gb|EFG74835.1| protein-(glutamine-N5) methyltransferase [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 282 Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 68/224 (30%), Positives = 105/224 (46%), Gaps = 14/224 (6%) Query: 6 DSHSFLCRVTGLSSHQVIV--DPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63 D+ VTG ++ + P DR R + + + + + G F V Sbjct: 26 DAEELAAHVTGTERGRLTLLESPGEDFLDRYR----DVVAARSRRVPLQHLTGTAAFGPV 81 Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 L + F PRPETE L+ A LP R V I+DL TG+GA+ +AL E P + Sbjct: 82 SLHVGPGVFVPRPETEALLAWVTAQPLP---ARPV--IVDLCTGSGALAVALAHEYPAAR 136 Query: 124 GVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182 V +D+S AL A+ NA V + D + + ++G D +V+NPPY+ V Sbjct: 137 IVAIDVSASALGYARRNAAGTAVELVQADVAEPGLLAELDGGVDAVVANPPYVPDAAV-- 194 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE 226 + EV DPR ++ GG DG++ + + +R L G+ +VE Sbjct: 195 VETEVAQHDPRRAVFGGPDGMAVIAPVVELAARWLRPGGVFAVE 238 >gi|29840417|ref|NP_829523.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Chlamydophila caviae GPIC] gi|29834766|gb|AAP05401.1| modification methylase, HemK family [Chlamydophila caviae GPIC] Length = 283 Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 68/217 (31%), Positives = 104/217 (47%), Gaps = 17/217 (7%) Query: 48 HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAF--SLPRIEKRDVVRILDLG 105 H S+H F + L + S PR ETELL + + + P I+ D+ Sbjct: 72 HGSVH-------FLGLHLEVDSRVLIPRMETELLAEQIVKYLSDHPHIQT-----FYDVC 119 Query: 106 TGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF 165 G+G + L++ K P + + DI KA+ +AK+NA N ++ + L D F+ Sbjct: 120 CGSGCLGLSIKKYCPNIQVILSDICSKAVAVAKTNAFKNNLN--VEILNGDLFAPYSCPG 177 Query: 166 DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225 D V NPPY+ + + EVR +P +L GG GL Y IA+ ++ L G+ + Sbjct: 178 DAFVCNPPYLSFDEILHVDPEVRCHEPWKALVGGSSGLEFYERIANELNTILLPRGVGWL 237 Query: 226 EIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262 EIGY Q V RIF +R + N ++D G DR+ Sbjct: 238 EIGYKQGSSVKRIFANRGIS-GNIYQDLSGCDRIFFL 273 >gi|307189800|gb|EFN74072.1| HemK methyltransferase family member 1 [Camponotus floridanus] Length = 353 Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 72/236 (30%), Positives = 113/236 (47%), Gaps = 28/236 (11%) Query: 46 LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIE--KRDVVRILD 103 L + I+G DF ++ + L F PRPETE+LVD F L R+ + D IL+ Sbjct: 115 LSRMPVQYIIGEWDFRDITVKLVPPIFIPRPETEILVD----FVLKRLNSLQLDSCEILE 170 Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN----AVTNGVSERFDTLQSDW-- 157 +G G+GA+ LAL K +D S A ++ N + N V+ TL+SD Sbjct: 171 IGCGSGAISLALAHACEKIKCTAIDTSPYACDLTIINRDKLNLANRVTVIHATLKSDATV 230 Query: 158 --FSSVEG---------LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206 F + G LFD +VSNPPY+ + + L E+R ++ +LDGG DGL Sbjct: 231 EVFKELNGASDMDLNLRLFDFVVSNPPYVPTKHISKLQPEIRIYEDLRALDGGDDGLKII 290 Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR----KLFLVNAFKDYGGNDR 258 + + ++ L G +E+ + ++ F ++ KL + +KD+ NDR Sbjct: 291 KPLLKYTAKVLKPGGRLFLEVDPTHP-EYIQFFTNKYPDFKLHHEHTYKDFCNNDR 345 >gi|261400910|ref|ZP_05987035.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Neisseria lactamica ATCC 23970] gi|269209279|gb|EEZ75734.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Neisseria lactamica ATCC 23970] gi|309378145|emb|CBX23213.1| unnamed protein product [Neisseria lactamica Y92-1009] Length = 305 Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 53/144 (36%), Positives = 80/144 (55%), Gaps = 2/144 (1%) Query: 91 PRIEKRDVVR-ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 P IE ++V LDL TG+G + + + P + VD+S ALE+A N G+ ER Sbjct: 129 PWIEYDELVHNALDLCTGSGCLAIQMAHHYPDAQIDAVDVSLDALEVAGINIEDYGLEER 188 Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209 + +D F + G +D+IVSNPPY+++ V+ L E +P ++L G DGL R I Sbjct: 189 IRLIHTDLFEGLAGTYDLIVSNPPYVDAESVEALPEEYL-HEPELALGSGADGLDATRQI 247 Query: 210 ADGVSRHLNKDGLCSVEIGYNQKV 233 ++ LN G+ VEIG+N+ V Sbjct: 248 LLNAAKFLNPKGVLLVEIGHNRDV 271 >gi|118359720|ref|XP_001013098.1| conserved hypothetical protein [Tetrahymena thermophila] gi|89294865|gb|EAR92853.1| conserved hypothetical protein [Tetrahymena thermophila SB210] Length = 564 Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 54/162 (33%), Positives = 85/162 (52%), Gaps = 13/162 (8%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110 I ++G +F ++ L + PR ET LV+ S +++ + L++G GTGA Sbjct: 11 IQYVIGEWEFRDLLLKMKPPVLIPRNETSYLVELVNKLS----KQKQKCQFLEIGIGTGA 66 Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS---------ERFDTLQSDWFSSV 161 + L+LLKE+ F G+ +D +E+AK N N + E Q++ + Sbjct: 67 ISLSLLKENSQFTGIAIDKQKFCIELAKQNLNLNKIDPQRLQLIHLECLKFFQNNLNQNP 126 Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203 + FD IVSNPPYI + V L +VR F+ +++LDGG DGL Sbjct: 127 DQQFDFIVSNPPYIPTSQVQNLDKQVRKFEDKVALDGGSDGL 168 >gi|34497626|ref|NP_901841.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Chromobacterium violaceum ATCC 12472] gi|34103482|gb|AAQ59844.1| probable adenine-specific methylase [Chromobacterium violaceum ATCC 12472] Length = 300 Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 54/144 (37%), Positives = 81/144 (56%), Gaps = 2/144 (1%) Query: 91 PRIEKRDVV-RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 P IE ++V R LDL TG+G + + L P + VDIS ALE+A N G+ +R Sbjct: 123 PWIEHPELVHRALDLCTGSGCLAIQLASHYPDAEVDAVDISLDALEVAAVNVEHYGLQDR 182 Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209 + + +D F +E +D+I+SNPPY+++ V+ L E +P I+L G DGL R I Sbjct: 183 INLIHTDMFEGLEEKYDLIISNPPYVDAESVEELPEEYL-HEPEIALGSGEDGLDATREI 241 Query: 210 ADGVSRHLNKDGLCSVEIGYNQKV 233 LN+ G+ VEIG+N+ + Sbjct: 242 LRRAPEFLNERGVLLVEIGHNRDM 265 >gi|261379818|ref|ZP_05984391.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Neisseria subflava NJ9703] gi|284797504|gb|EFC52851.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Neisseria subflava NJ9703] Length = 299 Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 52/144 (36%), Positives = 83/144 (57%), Gaps = 2/144 (1%) Query: 91 PRIEKRDVV-RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 P IE ++V R LDL TG+G + + + P + VD+S ALE+A N G+ +R Sbjct: 123 PWIEHDELVHRALDLCTGSGCLAIQMAHHYPDAQIDAVDLSLDALEVAAINIEDYGLEDR 182 Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209 + +D F ++ +D+IVSNPPY+++ V+ L E +P ++L G DGL R I Sbjct: 183 ISLVHTDLFEGLDETYDLIVSNPPYVDAESVEALPDEYL-HEPELALGSGEDGLDATRQI 241 Query: 210 ADGVSRHLNKDGLCSVEIGYNQKV 233 +++LN G+ VEIG+N++V Sbjct: 242 ILQAAKYLNPKGVLLVEIGHNREV 265 >gi|296436464|gb|ADH18634.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Chlamydia trachomatis G/11222] Length = 290 Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 64/191 (33%), Positives = 93/191 (48%), Gaps = 5/191 (2%) Query: 54 ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113 I G F V L ++ PR ETE+ V+ + + EK D+ G+G + L Sbjct: 69 IHGKVHFLGVELQVTPQVLIPRQETEIFVEQIIGYLQMHKEK---TTFYDVCCGSGCIGL 125 Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173 A+ K P + DIS +AL IA+SNA +N ++ D L D F DV+V NPP Sbjct: 126 AVRKHCPHVRVTLSDISPEALAIAESNARSNALA--VDFLLGDLFDPFSFPADVLVCNPP 183 Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233 Y+ EVR +P +L GG+ GL Y IA + + L G+ +EIG Q Sbjct: 184 YLSYKEFFESDPEVRCHEPWKALVGGVSGLEFYHRIATHIHKILVSGGVGWLEIGSTQGE 243 Query: 234 DVVRIFESRKL 244 DV +IF ++ + Sbjct: 244 DVKQIFHAKGI 254 >gi|225075804|ref|ZP_03719003.1| hypothetical protein NEIFLAOT_00820 [Neisseria flavescens NRL30031/H210] gi|224952886|gb|EEG34095.1| hypothetical protein NEIFLAOT_00820 [Neisseria flavescens NRL30031/H210] Length = 299 Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 52/144 (36%), Positives = 83/144 (57%), Gaps = 2/144 (1%) Query: 91 PRIEKRDVV-RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 P IE ++V R LDL TG+G + + + P + VD+S ALE+A N G+ +R Sbjct: 123 PWIEHDELVHRALDLCTGSGCLAIQMAHHYPDAQIDAVDLSLDALEVAAINIEDYGLEDR 182 Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209 + +D F ++ +D+IVSNPPY+++ V+ L E +P ++L G DGL R I Sbjct: 183 ISLVHTDLFEGLDETYDLIVSNPPYVDAESVEALPDEYL-HEPELALGSGEDGLDATRQI 241 Query: 210 ADGVSRHLNKDGLCSVEIGYNQKV 233 +++LN G+ VEIG+N++V Sbjct: 242 ILQAAKYLNPKGVLLVEIGHNREV 265 >gi|312871652|ref|ZP_07731744.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Lactobacillus iners LEAF 3008A-a] gi|311092877|gb|EFQ51229.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Lactobacillus iners LEAF 3008A-a] Length = 279 Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 78/258 (30%), Positives = 125/258 (48%), Gaps = 18/258 (6%) Query: 11 LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70 L L+ Q + D L Q +T + + K S I+G F + + Sbjct: 27 LAERQNLTPSQYRLQLDQDLSKEQLTQITKDLNKLHKGISPQYIVGHAWFLGYSIDVHPG 86 Query: 71 TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV----- 125 PR ETE LV AL + +D ++LDLGTG+GA+ +AL K++ K + Sbjct: 87 VLIPRFETEELVTWALDYL------KDNSKVLDLGTGSGAITVALAKKAEC-KNINNIVY 139 Query: 126 -GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184 DI+ AL ++ N + +++ T ++D +E FD+I+SNPPYI++ D + Sbjct: 140 YASDITDSALRQSEENFLKFNLNDII-TRKADVLIGLEK-FDLIISNPPYIKNSEKDLMD 197 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 V +P +L G DGL YR V +HLNKDG +E G++QK + +F +++L Sbjct: 198 QNVIKNEPEEALFAGADGLDFYRRFVKQVPKHLNKDGHFFLEFGFSQKDLLAELF-AKEL 256 Query: 245 --FLVNAFKDYGGNDRVL 260 F + D G R++ Sbjct: 257 PEFAIEFKNDLAGKPRMV 274 >gi|226307403|ref|YP_002767363.1| protein methyltransferase [Rhodococcus erythropolis PR4] gi|226186520|dbj|BAH34624.1| protein methyltransferase [Rhodococcus erythropolis PR4] Length = 310 Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 70/231 (30%), Positives = 106/231 (45%), Gaps = 12/231 (5%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101 + + +K + I+G N+ + + F PRPETELL+ AL+F K VV Sbjct: 62 VAQRVKRIPLQHIIGVASMGNIDVAVGPGVFIPRPETELLMGWALSFLEGCGSKPPVV-- 119 Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS-------ERFDTLQ 154 LDL TG+G + L++ + P V+ AL A+ NA + + D Sbjct: 120 LDLCTGSGVLALSIAEARPDAVVHAVEKEPAALAWARRNAADREAAGDKPIHLHQGDVTD 179 Query: 155 SDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214 + +EG D++VSNPPYI L EV D+DP +L GG DGLS + + ++ Sbjct: 180 RNLLPGLEGGVDLVVSNPPYIPEGA--QLQPEVMDYDPHTALFGGTDGLSVIKPMISNIA 237 Query: 215 RHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL-VNAFKDYGGNDRVLLFCR 264 R L G +E V +F +R++F V D G R ++ R Sbjct: 238 RWLRIGGAAGIEHDDTNGDGVAALFSARRVFGDVAQHPDLAGRPRFVVARR 288 >gi|295101444|emb|CBK98989.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Faecalibacterium prausnitzii L2-6] Length = 311 Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 71/264 (26%), Positives = 114/264 (43%), Gaps = 35/264 (13%) Query: 27 DSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL 86 D LD + L VR E + + G F + L + PR +TE++ ++A Sbjct: 47 DRPLDAAEAAKLEELTVRRAAREPLQYLCGSWPFLDFELAVGPGVLCPRADTEVVAETAA 106 Query: 87 AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA---------LEIA 137 + + R LDL GTG + L + + P + V V+ S +A L + Sbjct: 107 EM----LAGVEAPRALDLCAGTGCLGLGVKRLCPAAQVVCVEKSPEAYVYLEKNTRLALK 162 Query: 138 KSNAVTNGV-----------------SERFDTLQSD----WFSSVEGLFDVIVSNPPYIE 176 T V + + ++ D W S EG D+IVSNPPY+ Sbjct: 163 GRGGSTENVLDASPFEEPAFDWGVKPARAAEPVEGDLFTYWESLPEGQLDLIVSNPPYLT 222 Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236 + + L EV +P ++L+ G DGL Y+ IA+ + L G ++EIG+ Q+ V Sbjct: 223 AQEMSELQPEVAK-EPAMALEAGEDGLVFYKAIAEHYQKALRPGGALALEIGWQQREAVT 281 Query: 237 RIFESRKLFLVNAFKDYGGNDRVL 260 + E+ + KD+GGNDR + Sbjct: 282 ALLEANGWADIACRKDFGGNDRCV 305 >gi|319637772|ref|ZP_07992538.1| hypothetical protein HMPREF0604_00161 [Neisseria mucosa C102] gi|317400927|gb|EFV81582.1| hypothetical protein HMPREF0604_00161 [Neisseria mucosa C102] Length = 299 Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 52/144 (36%), Positives = 83/144 (57%), Gaps = 2/144 (1%) Query: 91 PRIEKRDVV-RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 P IE ++V R LDL TG+G + + + P + VD+S ALE+A N G+ +R Sbjct: 123 PWIEHDELVHRALDLCTGSGCLAIQMAHHYPDAQIDAVDLSLDALEVAAINIEDYGLEDR 182 Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209 + +D F ++ +D+IVSNPPY+++ V+ L E +P ++L G DGL R I Sbjct: 183 ISLVHTDLFEGLDETYDLIVSNPPYVDAESVEALPDEYL-HEPELALGSGEDGLDATRQI 241 Query: 210 ADGVSRHLNKDGLCSVEIGYNQKV 233 +++LN G+ VEIG+N++V Sbjct: 242 ILQAAKYLNPKGVLLVEIGHNREV 265 >gi|238026091|ref|YP_002910322.1| HemK protein [Burkholderia glumae BGR1] gi|237875285|gb|ACR27618.1| HemK protein [Burkholderia glumae BGR1] Length = 282 Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 81/253 (32%), Positives = 118/253 (46%), Gaps = 17/253 (6%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L V G S Q+I D+ L+ R E + +++G R+F+ + Sbjct: 21 DARILLAHVLGWSRTQLITRADAPLEAAAAERFRALEARRSAGEPVAQLVGSREFFGLAF 80 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 ++ D PRPETELLV++AL ++ +LDLGTG+GAV LA+ P + Sbjct: 81 EVTPDVLIPRPETELLVEAALDA----LDGIAAPAVLDLGTGSGAVALAIAAARPDARVT 136 Query: 126 GVDISCKALEIAKSNAVTNGVSER----FDTLQSDWFSSV--EGLFDVIVSNPPYIESVI 179 +D S AL +A+ NA R L SDW++++ F IVSNPPYI Sbjct: 137 ALDRSAAALAVARRNAARLLDDARPGGAVSLLASDWYAALGPAARFHAIVSNPPYIARHD 196 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 ++R F+PR +L DGL+ R I G L G +E GY+Q V Sbjct: 197 PHLDQGDLR-FEPRGALTDEADGLAAIRRIVAGAGAFLLPRGELWIEHGYDQAEAV---- 251 Query: 240 ESRKLFLVNAFKD 252 R L L F++ Sbjct: 252 --RALLLQAGFRE 262 >gi|163857113|ref|YP_001631411.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Bordetella petrii DSM 12804] gi|163260841|emb|CAP43143.1| putative adenine-specific methylase [Bordetella petrii] Length = 296 Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 66/195 (33%), Positives = 96/195 (49%), Gaps = 15/195 (7%) Query: 74 PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV--GVDISC 131 PR L+D LA P +E V +LD+ TG+G CLA+L F VD+S Sbjct: 109 PRSPIAELLDQGLA---PWVEPESVRAVLDMCTGSG--CLAILAALAFSDARVDAVDVSP 163 Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDF 190 ALE+A+ N G+ +R +SD F + +DVIV NPPY+ S + L E R Sbjct: 164 DALEVARRNVADYGLQDRLTLHRSDLFDQLPAAAYDVIVCNPPYVNSASMAALPDEYR-H 222 Query: 191 DPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAF 250 +P ++L GG DG+ R I R+L G+ +EIG+ + FE+ L + Sbjct: 223 EPALALAGGADGMDLVRRILAAAPRYLAPQGVLVLEIGHERP-----HFEAAFPQLQPVW 277 Query: 251 KDY-GGNDRVLLFCR 264 D +D++LL R Sbjct: 278 LDTEAASDQILLLAR 292 >gi|119944775|ref|YP_942455.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Psychromonas ingrahamii 37] gi|119863379|gb|ABM02856.1| adenine-specific modification methylase in HemK family protein [Psychromonas ingrahamii 37] Length = 303 Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 68/207 (32%), Positives = 108/207 (52%), Gaps = 7/207 (3%) Query: 27 DSVLDDRQRFFLTN-AIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85 D+ L R+R L + IVR K + + F + + T PR L+++ Sbjct: 65 DARLTRREREMLVDRIIVRIEKRIPVAYLTNKAWFAGLEFYVDERTLVPRSPIAELIEAH 124 Query: 86 LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145 A P ++K RILDL TG+G + +A P + VDIS AL++A+ N +G Sbjct: 125 FA---PWVDKAPK-RILDLCTGSGCIAIACAYAFPEAEVDAVDISEDALDVAEINIQGHG 180 Query: 146 VSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204 + ++ +QSD FS +E +D+IVSNPPY+++ +D L E + +P + L G DGL Sbjct: 181 LEQQVFPIQSDLFSGIENEKYDLIVSNPPYVDAQDMDNLPGEYK-HEPELGLACGADGLD 239 Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQ 231 R + S LN++G+ VE+G +Q Sbjct: 240 LVRKMLSQASSKLNEEGVLFVEVGNSQ 266 >gi|77359928|ref|YP_339503.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Pseudoalteromonas haloplanktis TAC125] gi|76874839|emb|CAI86060.1| putative 50S subunit L3 protein glutamine methyltransferase [Pseudoalteromonas haloplanktis TAC125] Length = 311 Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 56/136 (41%), Positives = 78/136 (57%), Gaps = 2/136 (1%) Query: 94 EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153 E V RILDL TG+G + +AL + + VDIS +ALE+A N +SER + Sbjct: 136 EPESVKRILDLCTGSGCIAIALAQAFENAQVDAVDISYEALEVADINITDYQLSERVLPI 195 Query: 154 QSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212 QSD FS V G +D+I++NPPY+++ + L E +P + L G DGL RTI Sbjct: 196 QSDVFSGVPGQTYDLIIANPPYVDAEDMADLPREFHH-EPELGLASGHDGLDVTRTILSE 254 Query: 213 VSRHLNKDGLCSVEIG 228 S+HL +GL VE+G Sbjct: 255 ASKHLTANGLLFVEVG 270 >gi|253998641|ref|YP_003050704.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Methylovorus sp. SIP3-4] gi|253985320|gb|ACT50177.1| modification methylase, HemK family [Methylovorus sp. SIP3-4] Length = 304 Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 53/143 (37%), Positives = 83/143 (58%), Gaps = 3/143 (2%) Query: 91 PRIEKRDVVR-ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 P I+ ++V D+ TG+G + + L P + VDIS AL +A N G+ ++ Sbjct: 125 PWIDYPEMVESAADICTGSGCLGVLLAHTFPNAEVDVVDISTDALAVANINIANYGLQDQ 184 Query: 150 FDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208 +QSD FS+++G +D+I+SNPPY+++ + L E R+ +P+I+L G DGL H T Sbjct: 185 ITAIQSDMFSALQGKTYDLIISNPPYVDAPSMAQLPEEYRN-EPQIALGSGTDGLEHTHT 243 Query: 209 IADGVSRHLNKDGLCSVEIGYNQ 231 + HLN GL VEIG+N+ Sbjct: 244 LLREAWHHLNDGGLLIVEIGHNR 266 >gi|313200714|ref|YP_004039372.1| HemK family modification methylase [Methylovorus sp. MP688] gi|312440030|gb|ADQ84136.1| modification methylase, HemK family [Methylovorus sp. MP688] Length = 304 Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 53/143 (37%), Positives = 83/143 (58%), Gaps = 3/143 (2%) Query: 91 PRIEKRDVVR-ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 P I+ ++V D+ TG+G + + L P + VDIS AL +A N G+ ++ Sbjct: 125 PWIDYPEMVESAADICTGSGCLGVLLAHTFPNAEVDVVDISTDALAVANINIANYGLQDQ 184 Query: 150 FDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208 +QSD FS+++G +D+I+SNPPY+++ + L E R+ +P+I+L G DGL H T Sbjct: 185 ITAIQSDMFSALQGKTYDLIISNPPYVDAPSMAQLPEEYRN-EPQIALGSGTDGLEHTHT 243 Query: 209 IADGVSRHLNKDGLCSVEIGYNQ 231 + HLN GL VEIG+N+ Sbjct: 244 LLREAWHHLNDGGLLIVEIGHNR 266 >gi|296137059|ref|YP_003644301.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Thiomonas intermedia K12] gi|295797181|gb|ADG31971.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Thiomonas intermedia K12] Length = 306 Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 81/266 (30%), Positives = 123/266 (46%), Gaps = 16/266 (6%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ + + V G S Q P+ +LD + L R E + +LG R+F+ + Sbjct: 20 DAQALIEAVLGWSRAQQAAHPERLLDTAELTRLHTLATRLRDGEPLAYVLGEREFFGLSF 79 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 ++ D PRP+TELLV+ AL +L + +LD+GTG+GA+ +A+ P + Sbjct: 80 EVTPDVLIPRPDTELLVEIAL-RNLDALPATHAPTVLDMGTGSGAIAIAIAHARPHVQVW 138 Query: 126 GVDISCKALEIAKSNAV----TNGVSERFDTLQSDWFSSVEGL-----FDVIVSNPPYIE 176 +D S AL +A+ NA LQS+W+ ++ L FD IVSNPPYI Sbjct: 139 ALDASAAALAVAQGNARRLLDARRAGGEVHFLQSNWWDALHPLATTARFDCIVSNPPYIA 198 Query: 177 SVIVDCLGLEVRDFDPRISLDG---GIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233 + L +P ++L G DGL I R L DG +E GY+Q Sbjct: 199 AHDPHLPALR---HEPALALTGQHPNPDGLGDLHQIIAQADRFLRDDGCLLLEHGYDQAA 255 Query: 234 DVVRIFESRKLFLVNAFKDYGGNDRV 259 V + E+ V + +D G +RV Sbjct: 256 AVRDLLEAHGYRKVFSARDLAGIERV 281 >gi|152990781|ref|YP_001356503.1| protoporphyrinogen oxidase [Nitratiruptor sp. SB155-2] gi|151422642|dbj|BAF70146.1| protoporphyrinogen oxidase [Nitratiruptor sp. SB155-2] Length = 274 Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 74/243 (30%), Positives = 110/243 (45%), Gaps = 23/243 (9%) Query: 26 PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85 P+ +D + F L R L +E I I+ FY + + PRPETE+L+D Sbjct: 44 PEEKIDAKPFFELVK---RRLAYEPIEYIIQRVSFYGEEFFIQNGVLIPRPETEILIDEV 100 Query: 86 LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145 E R + ++G G+G + L + P + DIS KA+ A+ N G Sbjct: 101 SK------ELRGDESLAEIGVGSGVISAILKMKFPSLQITATDISDKAIACARKNFQKFG 154 Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLE----VRDFDPRISLDGGID 201 + + +Q+D VE DVIVSNPPYI G E V ++P +L GG + Sbjct: 155 LD--IELVQTDLLDGVEKKIDVIVSNPPYIAK------GFELEPNVAKYEPHEALFGGRE 206 Query: 202 GLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 G + I D + K + + E+G++QK + +SRK V FKD G DR + Sbjct: 207 GDEILKKIIDLFLQSSAK--ILACEMGFDQKNAIRDYVKSRKDIDVRFFKDLAGLDRGFI 264 Query: 262 FCR 264 R Sbjct: 265 IQR 267 >gi|329119295|ref|ZP_08247982.1| protein-(glutamine-N5) methyltransferase [Neisseria bacilliformis ATCC BAA-1200] gi|327464642|gb|EGF10940.1| protein-(glutamine-N5) methyltransferase [Neisseria bacilliformis ATCC BAA-1200] Length = 299 Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 56/144 (38%), Positives = 81/144 (56%), Gaps = 6/144 (4%) Query: 91 PRIEKRDVVR-ILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVS 147 P IE ++V +LDL TG+G CLA+ + V VDIS ALE+A N G+ Sbjct: 123 PWIEYDELVHNVLDLCTGSG--CLAIQAACHYPDAVVDAVDISLDALEVAAVNVEDYGLQ 180 Query: 148 ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207 ER + + +D F +EG +D+I++NPPY+++ V L E R +P +L G DGL R Sbjct: 181 ERVNLIYTDLFEGLEGRYDLIITNPPYVDAESVAALPPEYR-HEPEPALGSGEDGLDAVR 239 Query: 208 TIADGVSRHLNKDGLCSVEIGYNQ 231 I +R LN G+ EIG+N+ Sbjct: 240 RILPQAARFLNPHGVLLAEIGHNR 263 >gi|254468536|ref|ZP_05081942.1| protein methyltransferase HemK [beta proteobacterium KB13] gi|207087346|gb|EDZ64629.1| protein methyltransferase HemK [beta proteobacterium KB13] Length = 281 Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 66/209 (31%), Positives = 104/209 (49%), Gaps = 20/209 (9%) Query: 57 WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116 W FY ++S PRPETEL++D ++ D V +LDLG G+G++ +++ Sbjct: 81 W-SFYGRSFYINSSMLIPRPETELIIDILKEKNILN----DNVELLDLGAGSGSIGISVK 135 Query: 117 KESPFFKGVGV-DISCKALEIAKSNAVTNGVSERFD----TLQSDWFSSVEGL-FDVIVS 170 E+ + + DIS + + K N ++FD S+WF ++ + FD+I+S Sbjct: 136 LETKNKINLHLSDISKRCVHGIKKNL------QKFDIQAKVYLSNWFENIPNIKFDLIIS 189 Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230 NPPYI L F+P+ +L DGL+ I +LN+ GL +E GYN Sbjct: 190 NPPYIS---YKDPHLNELHFEPKRALVSKNDGLADIHKIIKNSIHYLNRQGLIIIEHGYN 246 Query: 231 QKVDVVRIFESRKLFLVNAFKDYGGNDRV 259 QK +V IF V ++KD G+ R+ Sbjct: 247 QKDEVQEIFNRYNFNQVKSYKDLLGHYRI 275 >gi|227544507|ref|ZP_03974556.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Lactobacillus reuteri CF48-3A] gi|300909305|ref|ZP_07126766.1| protein-(glutamine-N5) methyltransferase [Lactobacillus reuteri SD2112] gi|112943598|gb|ABI26315.1| modification methylase HemK [Lactobacillus reuteri] gi|227185530|gb|EEI65601.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Lactobacillus reuteri CF48-3A] gi|300893170|gb|EFK86529.1| protein-(glutamine-N5) methyltransferase [Lactobacillus reuteri SD2112] Length = 288 Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 59/205 (28%), Positives = 97/205 (47%), Gaps = 7/205 (3%) Query: 37 FLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR 96 + +AI R L HE I+G FY ++ + P ET L+D + L + R Sbjct: 60 WWKDAITRLLNHEPAQYIVGQAPFYGRTFKVNKNVLIPEAETAELID----WVLQEMPSR 115 Query: 97 DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 + R+LDLGTG+G + + L E P + DIS AL IA+ N + ++SD Sbjct: 116 PL-RVLDLGTGSGVIGITLALERPNWHVSLSDISPAALAIAQENMAKFNL--ELPLIKSD 172 Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216 F +++ +D+IV+NPPYI+ + V + +P ++L GL Y + ++ Sbjct: 173 LFENIDQQYDLIVTNPPYIDPDDTGEIDQAVLENEPALALFASEHGLGFYHRLFKQAGQY 232 Query: 217 LNKDGLCSVEIGYNQKVDVVRIFES 241 L G E GY+Q+ + + Sbjct: 233 LTTTGQIFGETGYDQEESIQELLHQ 257 >gi|253564133|ref|ZP_04841590.1| conserved hypothetical protein [Bacteroides sp. 3_2_5] gi|251947909|gb|EES88191.1| conserved hypothetical protein [Bacteroides sp. 3_2_5] gi|301161571|emb|CBW21111.1| putative protoporphyrinogen oxidase [Bacteroides fragilis 638R] Length = 278 Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 77/259 (29%), Positives = 119/259 (45%), Gaps = 16/259 (6%) Query: 12 CRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDT 71 C + G + + D L ++ L + + R K+E I I G FY ++ Sbjct: 30 CDLLGQDAIDYYLGKDITLSVNEQCDLESIVERLKKNEPIQYIQGETCFYGSMFRVAPGV 89 Query: 72 FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131 PRPETE LVD + E R+LD+GTG+G + ++L K P D+S Sbjct: 90 LIPRPETEELVDLIVK------EAATGTRLLDIGTGSGCIAISLAKHIPQAVVTAWDVSE 143 Query: 132 KALEIAKSN--AVTNGVS-ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVR 188 +AL IA N + GV E+ D L ++ + +D+IVSNPPY+ + + V Sbjct: 144 EALAIAGENNRELKAGVHFEKMDVLSAEPVGDDQ--YDMIVSNPPYVTESEKNEMEPNVL 201 Query: 189 DFDPRISL---DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245 D++PR++L D D L YR IA + L G EI +V+++ + Sbjct: 202 DWEPRLALFVPDN--DPLRFYRRIASLGRKMLRLHGRLYFEINRAYGEEVLQMLHEQGYE 259 Query: 246 LVNAFKDYGGNDRVLLFCR 264 + KD GNDR++ R Sbjct: 260 ELRLIKDISGNDRIVTAKR 278 >gi|194862510|ref|XP_001970018.1| GG23621 [Drosophila erecta] gi|190661885|gb|EDV59077.1| GG23621 [Drosophila erecta] Length = 323 Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 75/253 (29%), Positives = 121/253 (47%), Gaps = 24/253 (9%) Query: 18 SSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPE 77 S Q+ ++P L D +RF L+H I+G DF ++ L S F PRPE Sbjct: 76 SYDQLQLNPGQ-LADFERFLEARCARMPLQH-----IIGEWDFMDLTLKTSPSVFIPRPE 129 Query: 78 TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137 TE V + + V +L++G G+GA+ L++L P + ++ S A +A Sbjct: 130 TEEFV----RLVIENYKNAKHVDLLEVGCGSGAMSLSMLHSLPQVEATAIERSKAATVLA 185 Query: 138 KSNAVTNGVSERFD----TLQSDWFSS---VEGLFDVIVSNPPYIESVIVDCLGLEVRDF 190 NA G+ RF+ T++ D + + +D+I+SNPPY+++ L EV + Sbjct: 186 AENAKMLGLLNRFEVHNHTMEEDKYMPEVLKDKKYDLIISNPPYVKTEEFQFLHPEVVVY 245 Query: 191 DPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI-----FESRKLF 245 + +LDGG DGL R + D RHL G +E+G N+ +V+ +E R L Sbjct: 246 ENLNALDGGSDGLRVARLVFDLACRHLRPGGKLWLELG-NEHPPLVKTIMNLKYEGR-LK 303 Query: 246 LVNAFKDYGGNDR 258 V ++ D +R Sbjct: 304 FVASYNDQYQRER 316 >gi|297172146|gb|ADI23127.1| methylase of polypeptide chain release factors [uncultured gamma proteobacterium HF0770_09E07] Length = 256 Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 68/221 (30%), Positives = 114/221 (51%), Gaps = 17/221 (7%) Query: 37 FLTNAIVRSLKHE-SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEK 95 F + +++ +K++ I I+G +FY ++ D PRPETE+LVD + + +E Sbjct: 39 FSLDGVIQEIKNKRPIQYIIGEWNFYEGTYFVNKDVLIPRPETEILVDH-IKNNFSNLE- 96 Query: 96 RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155 +LDLGTG+G + + + K +G DI KAL++AK N + F ++S Sbjct: 97 ----NVLDLGTGSGCIAIEISKLFESATILGSDICEKALKVAKKNNNQSNNKVNF--IKS 150 Query: 156 DWFSSVEGLFDVIVSNPPYI-ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214 +WFS +EG FD+IVSNPPYI E ++ L F+P+++L GL + I Sbjct: 151 NWFSDIEGQFDLIVSNPPYIPEGTKLEASTL----FEPKVALFSEETGLKDLKKIISEAI 206 Query: 215 RHLNKDGLCSVEIGYNQKVDVVRIFES---RKLFLVNAFKD 252 +L +G +E G Q ++ + + + ++N KD Sbjct: 207 NYLKINGALILEHGMGQSSELSSYMKKIGYKNIGILNDLKD 247 >gi|325911660|ref|ZP_08174067.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Lactobacillus iners UPII 143-D] gi|325476426|gb|EGC79585.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Lactobacillus iners UPII 143-D] Length = 279 Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 77/258 (29%), Positives = 125/258 (48%), Gaps = 18/258 (6%) Query: 11 LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70 L L+ Q + D L Q +T + + K S I+G F + + Sbjct: 27 LAERQNLTPSQYRLQLDQDLSKEQLTQITKDLNKLHKGMSPQYIVGHAWFLGYSIDVHPG 86 Query: 71 TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV----- 125 PR ETE LV AL + +D ++LDLGTG+GA+ +AL K++ K + Sbjct: 87 VLIPRFETEELVTWALDYL------KDNSKVLDLGTGSGAITVALAKKAEC-KNINNIVY 139 Query: 126 -GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184 DI+ AL ++ N + +++ T ++D +E FD+I+SNPPYI++ D + Sbjct: 140 YASDITDSALRQSEENFLKFNLNDII-TRKADVLIGLEK-FDLIISNPPYIKNSEKDLMD 197 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 V +P +L G DGL YR V +HLN+DG +E G++QK + +F +++L Sbjct: 198 QNVIKNEPEEALFAGADGLDFYRRFVKQVPKHLNQDGHFFLEFGFSQKDLLAELF-AKEL 256 Query: 245 --FLVNAFKDYGGNDRVL 260 F + D G R++ Sbjct: 257 PEFAIEFKNDLAGKPRMV 274 >gi|313667968|ref|YP_004048252.1| adenine-specific methylase [Neisseria lactamica ST-640] gi|313005430|emb|CBN86865.1| hypothetical adenine-specific methylase [Neisseria lactamica 020-06] Length = 303 Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 53/144 (36%), Positives = 79/144 (54%), Gaps = 2/144 (1%) Query: 91 PRIEKRDVVR-ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 P IE ++V LDL TG+G + + + P VD+S ALE+A N G+ ER Sbjct: 127 PWIEYDELVHNALDLCTGSGCLAIQMAHHYPDAHIDAVDVSLDALEVAGINIEDYGLEER 186 Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209 + +D F + G +D+IVSNPPY+++ V+ L E +P ++L G DGL R I Sbjct: 187 IRLIHTDLFEGLAGTYDLIVSNPPYVDAESVEALPEEYL-HEPELALGSGADGLDATRQI 245 Query: 210 ADGVSRHLNKDGLCSVEIGYNQKV 233 ++ LN G+ VEIG+N+ V Sbjct: 246 LLNAAKFLNPKGVLLVEIGHNRDV 269 >gi|194766081|ref|XP_001965153.1| GF23689 [Drosophila ananassae] gi|190617763|gb|EDV33287.1| GF23689 [Drosophila ananassae] Length = 320 Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 73/238 (30%), Positives = 114/238 (47%), Gaps = 22/238 (9%) Query: 28 SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALA 87 S L D +RF L+H I+G DF ++ L + F PRPETE V L Sbjct: 82 SQLADFERFLEARCARMPLQH-----IIGEWDFMDITLKTAPTVFIPRPETEEFVR--LV 134 Query: 88 FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147 + EK V +L++G G+GA+ LA+L P ++ S A +A NA + Sbjct: 135 IENYKNEKH--VNLLEVGCGSGAMSLAMLHSLPQVVSTAIERSKAATVLAAENAKLLNLQ 192 Query: 148 ERF----DTLQSDWFSSVE---GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200 +RF T++ D + E +D+I+SNPPY+++ L EV ++ +LDGG Sbjct: 193 DRFTVHNHTMEEDKYMPEELKDKKYDLIISNPPYVKTEEFQYLHPEVVVYENLNALDGGS 252 Query: 201 DGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI-----FESRKLFLVNAFKDY 253 DGL R + + RHL+ G +E+G N+ +V+ +E R F+ + Y Sbjct: 253 DGLRVARLVFELACRHLHPGGKLWLELG-NEHPPMVKTIMNLKYEGRLKFIASYNDQY 309 >gi|217970599|ref|YP_002355833.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Thauera sp. MZ1T] gi|217507926|gb|ACK54937.1| modification methylase, HemK family [Thauera sp. MZ1T] Length = 317 Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 65/212 (30%), Positives = 108/212 (50%), Gaps = 11/212 (5%) Query: 27 DSVLDDRQRFFLTNAIVRSLKHE-SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85 D+ + +R L AI + + ILG + R T+ PR L++ Sbjct: 82 DACIPSEERIGLLEAIEQRVDERVPTAYILGEAWLGDFRFTVDPRVIVPRSFFAELLEDG 141 Query: 86 LAFSLPRIEKRDVV-RILDLGTGTGAVCLALLKESPFFKG--VGVDISCKALEIAKSNAV 142 A P +E + V +LD+ TG+G CLA+L F VD+S AL++A+ N Sbjct: 142 FA---PWVEDPEAVGSVLDMCTGSG--CLAILMAHAFPNAHVSAVDLSEDALDVARINVA 196 Query: 143 TNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201 G+ +R + + D F +EG FD+I+SNPPY+ + ++ L E +P+++L G D Sbjct: 197 DYGLEDRIELVHGDVFEGLEGRRFDLILSNPPYVTAEAMEALPPEYL-HEPQMALASGED 255 Query: 202 GLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233 GL R + + HLN +G+ +VE+G+N+ + Sbjct: 256 GLDVVRRLLAEAAEHLNPEGILAVEVGHNRAI 287 >gi|195471784|ref|XP_002088182.1| GE18440 [Drosophila yakuba] gi|194174283|gb|EDW87894.1| GE18440 [Drosophila yakuba] Length = 315 Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 72/237 (30%), Positives = 113/237 (47%), Gaps = 24/237 (10%) Query: 30 LDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFS 89 L D +RF L+H I+G DF ++ L S F PRPETE V + Sbjct: 79 LADFERFLEARCARMPLQH-----IIGEWDFMDITLKTSPSVFIPRPETEEFVRLVID-- 131 Query: 90 LPRIEKRDV--VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147 E ++V V +L++G G+GA+ L++L P + ++ S A +A NA G+ Sbjct: 132 ----EYKNVKHVDLLEVGCGSGAMSLSMLHSLPQVQATAIERSKAATVLAAENAKMLGLL 187 Query: 148 ERFD----TLQSDWFSS---VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200 RF+ T++ D + + +D+I+SNPPY+++ L EV ++ +LDGG Sbjct: 188 NRFEVHNHTMEEDKYMPEVLKDKKYDLIISNPPYVKTEEFQFLHPEVVVYENLNALDGGS 247 Query: 201 DGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI----FESRKLFLVNAFKDY 253 DGL R + D RHL G +E+G + V I +E R F+ + Y Sbjct: 248 DGLRVARLVFDLACRHLRPGGKLWLELGNDHPPLVKTIMNLKYEGRLKFIASYNDQY 304 >gi|86131745|ref|ZP_01050342.1| methyltransferase, HemK family [Dokdonia donghaensis MED134] gi|85817567|gb|EAQ38741.1| methyltransferase, HemK family [Dokdonia donghaensis MED134] Length = 291 Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 73/234 (31%), Positives = 105/234 (44%), Gaps = 4/234 (1%) Query: 34 QRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVD---SALAFSL 90 QR L R K E + I G FY + ++ T PRPETE LV +A L Sbjct: 54 QRKELEEITARLSKSEPMQYITGSSSFYGLDFQVNPATLIPRPETEELVAWIIDDVAQGL 113 Query: 91 PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150 + E +D++R+LD+GTG+G + + L K VDIS AL A NA NGV F Sbjct: 114 LKEEAQDMLRLLDIGTGSGCIAITLAKNINKATVEAVDISQNALATAYQNAKANGVKVDF 173 Query: 151 DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL-DGGIDGLSHYRTI 209 +++ +++VIVSNPPY+ + V +P +L D L YR I Sbjct: 174 YNQNILETQALDEVYNVIVSNPPYVREQEKAMMRENVLSNEPDSALFVSDQDPLIFYRKI 233 Query: 210 ADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFC 263 + + L G EI + V + ++ V KD G DR++ C Sbjct: 234 GELARKSLAPSGALYFEINEYLGRETVALLKNIGFTDVVLRKDMFGKDRMIKAC 287 >gi|311743961|ref|ZP_07717767.1| protein-(glutamine-N5) methyltransferase [Aeromicrobium marinum DSM 15272] gi|311313091|gb|EFQ83002.1| protein-(glutamine-N5) methyltransferase [Aeromicrobium marinum DSM 15272] Length = 285 Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 62/193 (32%), Positives = 90/193 (46%), Gaps = 3/193 (1%) Query: 50 SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109 + + G F +V L + F PRPETELL A+ R + VV +DL TG+G Sbjct: 71 PLQHLTGSAAFRHVDLEVGPGVFVPRPETELLAGWAVQQLSARGPESPVV--VDLCTGSG 128 Query: 110 AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIV 169 A+ L+++ E P V++ A A N G+ R + +D F ++G DV+V Sbjct: 129 AIALSIVHEVPTAVVHAVELDEVAFGWAHQNLAGTGIDLRLGDM-ADAFGDLDGTVDVVV 187 Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY 229 +NPPYI + + EVRD DP ++L G DGL R + R L G+ E Sbjct: 188 ANPPYIPLDAWESVAPEVRDHDPALALWSGDDGLDAMRVVEQTAWRLLRPGGVVGAEHAD 247 Query: 230 NQKVDVVRIFESR 242 Q +F R Sbjct: 248 AQGDTAPAVFAGR 260 >gi|332025875|gb|EGI66031.1| HemK methyltransferase family member 1 [Acromyrmex echinatior] Length = 353 Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 70/239 (29%), Positives = 114/239 (47%), Gaps = 33/239 (13%) Query: 46 LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIE--KRDVVRILD 103 L + I+G DF ++ + L F PRPETE+LVD F L R+ + D IL+ Sbjct: 114 LSRMPVQYIIGEWDFRDITVKLVPPIFIPRPETEILVD----FVLKRLNSSQADSCEILE 169 Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER----FDTLQSDWFS 159 +G G+GA+ LAL K +D + A ++ N +SE+ TL+SD + Sbjct: 170 IGCGSGAISLALAHACKKIKCTAIDENLHACDLTMINRSKLDLSEQVIVIHATLKSD--A 227 Query: 160 SVE----------------GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203 S+E LFD ++SNPPY+ + + L E+R ++ +LDGG DGL Sbjct: 228 SIETLSNLYDAGDSKSLNSKLFDYVISNPPYVPTKKISELQPEIRIYEDLRALDGGDDGL 287 Query: 204 SHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR----KLFLVNAFKDYGGNDR 258 + + ++ L G +E+ + ++ F ++ KL + +KD+ NDR Sbjct: 288 KVIKPLLKYAAKGLKPGGRLFIEVDPTHP-EYIQFFTNKYPELKLHYKHTYKDFCNNDR 345 >gi|282917466|ref|ZP_06325219.1| protein-(glutamine-N5) methyltransferase [Staphylococcus aureus subsp. aureus D139] gi|283771285|ref|ZP_06344174.1| HemK protein [Staphylococcus aureus subsp. aureus H19] gi|282318668|gb|EFB49025.1| protein-(glutamine-N5) methyltransferase [Staphylococcus aureus subsp. aureus D139] gi|283459490|gb|EFC06583.1| HemK protein [Staphylococcus aureus subsp. aureus H19] Length = 278 Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 72/233 (30%), Positives = 115/233 (49%), Gaps = 26/233 (11%) Query: 41 AIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR 100 A+ R L E I I+G+ FY + ++S+ PRPETE + L F L ++E D Sbjct: 59 ALQRMLLGEPIQYIVGFASFYGRKFDVNSNCLIPRPETE---EVMLHF-LQQLE--DDAT 112 Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 I+D+GTG+G + + L E P + DIS +A+ IA++NA + +F L D Sbjct: 113 IVDIGTGSGVLAITLKCEKPDLNVIATDISLEAMNIARNNAEKHQSQIQF--LTGDALKP 170 Query: 161 V--EGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217 + EG+ + ++SNPPYI+ + + V F+P +L G + Y +I + + + Sbjct: 171 LIKEGIKLNGLISNPPYIDEKDMVTMSPTVTRFEPHQALFADNHGYAIYESIIEDLPHVM 230 Query: 218 NKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK--------DYGGNDRVLLF 262 K EIGYNQ E+ K ++N F D G+DR++ F Sbjct: 231 EKGSPVVFEIGYNQG-------EALKSIILNKFPDKKIDIIKDINGHDRIVSF 276 >gi|58337081|ref|YP_193666.1| protoporphyrinogen oxidase [Lactobacillus acidophilus NCFM] gi|227903649|ref|ZP_04021454.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Lactobacillus acidophilus ATCC 4796] gi|58254398|gb|AAV42635.1| protoporphyrinogen oxidase [Lactobacillus acidophilus NCFM] gi|227868536|gb|EEJ75957.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Lactobacillus acidophilus ATCC 4796] Length = 280 Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 78/257 (30%), Positives = 123/257 (47%), Gaps = 17/257 (6%) Query: 11 LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70 L L+ + + D L D Q I + K S ILG+ F ++ + Sbjct: 28 LAERLNLTPSEFELKQDMTLSDDQIKQANKDIKKLAKGVSPQYILGYAWFLGYKIMVQRG 87 Query: 71 TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV----- 125 PR ETE LV ++L ++ D V LDLGTG+G + +ALLKE+ KG+ Sbjct: 88 VLIPRFETEELV----TWALESLKNGDTV--LDLGTGSGCITVALLKEAEK-KGIKDISM 140 Query: 126 -GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184 D++ AL I++ N + + T +++ + G FD+I+SNPPYI++ + + Sbjct: 141 YASDVTDNALRISEENFLNYNLD--VTTRKANVLIGL-GKFDLIISNPPYIKTGEKNEMD 197 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF-ESRK 243 V +P +L GG DGL YR A V HLN G +E G++++ + +F E Sbjct: 198 KNVLQNEPEEALFGGKDGLDFYRRFAKQVRAHLNSHGEFFLEFGFSEEDQLRELFAEELP 257 Query: 244 LFLVNAFKDYGGNDRVL 260 F + KD G R++ Sbjct: 258 DFDIEFRKDMAGKPRMV 274 >gi|325299194|ref|YP_004259111.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacteroides salanitronis DSM 18170] gi|324318747|gb|ADY36638.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacteroides salanitronis DSM 18170] Length = 280 Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 80/263 (30%), Positives = 118/263 (44%), Gaps = 13/263 (4%) Query: 7 SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66 + S L V S+ + D +++ L + + R + E I G F + Sbjct: 25 AKSILTEVFRFSALDLYDGKDREFSEKEHAALEDILSRLKRFEPFQYITGEASFCGLPFH 84 Query: 67 LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126 ++ PRPET LVD + + + + V I+D+GTG+G + +AL + P + Sbjct: 85 VAPGVLIPRPETAELVD----WIVSDFQGKAEVSIVDIGTGSGCIAVALARFLPGARVSA 140 Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVDCLG 184 DIS AL IA+ NA N V R D Q D FS + E + VSNPPYI + Sbjct: 141 WDISDAALGIARRNAERNRV--RVDFRQVDVFSHIPAEAHAHIFVSNPPYIREREKADME 198 Query: 185 LEVRDFDPRISL---DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 V D++P ++L DG D L +YR IA HL G+ VEI + V + Sbjct: 199 RNVLDWEPELALFVPDG--DPLRYYRRIAGLGLVHLAPSGVLYVEINQAYGAETVELLAG 256 Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264 + KD GNDR++ R Sbjct: 257 IGYRDIVLRKDMSGNDRMIKAVR 279 >gi|229496958|ref|ZP_04390663.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Porphyromonas endodontalis ATCC 35406] gi|229316060|gb|EEN81988.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Porphyromonas endodontalis ATCC 35406] Length = 294 Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 79/261 (30%), Positives = 120/261 (45%), Gaps = 15/261 (5%) Query: 10 FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69 L + LS Q+++ + LD+ Q A+ R L HE I ILG F + L ++ Sbjct: 32 LLEEILHLSRTQLLMASERPLDEGQEGQCWEAVRRLLHHEPIQYILGHAPFGPLDLFVAP 91 Query: 70 DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129 PRPETE L + + R + + VRILDLGTG+G + L L + P + ++ Sbjct: 92 GVLIPRPETEELCSTIVE----RHKGQKGVRILDLGTGSGCIALYLAQRLPQSEVFALEK 147 Query: 130 SCKALEIAKSNAVTNGVSE------RFDTLQ-SDWFSSVEGLFDVIVSNPPYIESVIVDC 182 S +A IA+ N +G+ R D L+ W SS+ L D+IVSNPPYI+ Sbjct: 148 SDQAATIARRNFDRSGLGSSTPQLLRGDMLEVGSWASSLPPL-DIIVSNPPYIQLSEAVT 206 Query: 183 LGLEVRDFDPRISLDGG-IDGLSHYRTIADGVSR-HLNKDGLCSVEIGYNQKVDVVRIF- 239 + V + +P ++L D L YR I +R + +E+ D + IF Sbjct: 207 MEPHVLEHEPHLALFAPEADPLLFYRAICQLAARLPMQSSAHIYLELNALLAEDTLAIFA 266 Query: 240 ESRKLFLVNAFKDYGGNDRVL 260 E+ + + D G R L Sbjct: 267 EAPHILSASLLPDLSGKSRFL 287 >gi|156548304|ref|XP_001602562.1| PREDICTED: similar to protein-(glutamine-N5) methyl transferase, putative [Nasonia vitripennis] Length = 334 Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 82/271 (30%), Positives = 123/271 (45%), Gaps = 32/271 (11%) Query: 13 RVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTF 72 ++T L +H + VLD Q L L + I+G DF + LTL F Sbjct: 64 KITDLINHH-----ERVLDKEQLEKLELLCECRLSRMPVQYIIGEWDFRELTLTLEPPIF 118 Query: 73 EPRPETELLVDSALAFSLPRIE--KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130 PRPETE+LVD F L RI IL++G G+GA+ L++L S V +D++ Sbjct: 119 IPRPETEILVD----FLLTRISDSANKNKNILEIGCGSGAISLSVLHSSQNANIVAIDVN 174 Query: 131 CKALEIAKSNAVTNGVSERFDTL----QSDWFSSVEGL--------------FDVIVSNP 172 +A E+ NA + R L Q D V+ FD IVSNP Sbjct: 175 PRACELTIRNAKNLDLDMRLTVLNAAIQKDGKIEVKKAYGTNKEEVDFSKRKFDFIVSNP 234 Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI--GYN 230 PYI + V L E++ ++ +LDGG DGL I S LN G +E+ + Sbjct: 235 PYIPTKSVFELQPEIKLYEDIRALDGGDDGLKWIEPILKYASEALNVGGYLILEVDSSHP 294 Query: 231 QKVD-VVRIFESRKLFLVNAFKDYGGNDRVL 260 +++ +V + + +L + KDY +R++ Sbjct: 295 ERIKFLVEKYYANQLKFKHIHKDYCNKERIV 325 >gi|302526243|ref|ZP_07278585.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptomyces sp. AA4] gi|302435138|gb|EFL06954.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptomyces sp. AA4] Length = 263 Score = 89.4 bits (220), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 55/176 (31%), Positives = 86/176 (48%), Gaps = 17/176 (9%) Query: 38 LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97 L + R + E + ILGW +F R ++ F PR TELLV A+ F+ D Sbjct: 45 LAGMVERRVAGEPLEHILGWAEFAGRRFVVAPGVFVPRHRTELLVRLAVGFA------HD 98 Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 +LDL G+GA+ + E+P + D+ A+E A+ N + Q D Sbjct: 99 QSVVLDLCCGSGALGATVAAEAPGIELHAADVEPAAVECARQNVPG-------EVYQGDL 151 Query: 158 FSSV----EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209 ++ + G DV+++N PY+ + V + E RD +PR++LDGG DGL R + Sbjct: 152 YAPLPPRLRGRVDVLIANVPYVPTDDVALMPPEARDHEPRVALDGGADGLDVLRRV 207 >gi|325953818|ref|YP_004237478.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Weeksella virosa DSM 16922] gi|323436436|gb|ADX66900.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Weeksella virosa DSM 16922] Length = 283 Score = 89.4 bits (220), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 65/213 (30%), Positives = 109/213 (51%), Gaps = 9/213 (4%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110 I +ILG+ F + + ++ T PRPETE LV+ +A L + + + +R+LD+GTG+G Sbjct: 68 IQQILGYAYFMDWKFLVNEFTLIPRPETEELVE-WIAKDLHK--RTNELRVLDIGTGSGC 124 Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS--VEGLFDVI 168 + +AL P + +D S +A+ +AK NA N V D D F E +DV+ Sbjct: 125 IPIALKHLLPNAQISAIDFSAQAIAMAKKNAKYNKV--EVDFFVHDIFDKFPTEKKYDVL 182 Query: 169 VSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG-LSHYRTIADGVSRHLNKDGLCSVEI 227 VSNPPY+ + + + V +F+P +L D L +Y+ I + L +G+ +EI Sbjct: 183 VSNPPYVRNCEKEAMHQNVLNFEPETALFVADDNPLKYYQRIIEVAKEILTAEGVLYLEI 242 Query: 228 GYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 ++ ++ + V KD G+ R+L Sbjct: 243 NQYLSQEMTELYSGDYEY-VELRKDLSGHYRML 274 >gi|255009911|ref|ZP_05282037.1| putative protoporphyrinogen oxidase [Bacteroides fragilis 3_1_12] gi|313147699|ref|ZP_07809892.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12] gi|313136466|gb|EFR53826.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12] Length = 278 Score = 89.4 bits (220), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 76/259 (29%), Positives = 120/259 (46%), Gaps = 16/259 (6%) Query: 12 CRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDT 71 C + G + + D +L ++ L + + R K+E I I G +FY ++ Sbjct: 30 CDLLGQDAIDYYLGKDIILSANEQRDLESIVERLKKNEPIQYIQGRANFYGSMFRVAPGV 89 Query: 72 FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131 PRPETE LVD + E VR+LD+GTG+G + ++L K P + D+S Sbjct: 90 LIPRPETEELVDLIVK------ESATGVRLLDIGTGSGCIAISLSKHIPGAEVTAWDVSE 143 Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFS---SVEGLFDVIVSNPPYIESVIVDCLGLEVR 188 AL IA+ N F+ + D FS S + +D+IVSNPPY+ + + V Sbjct: 144 DALAIARQNNQELKTKVNFEKV--DVFSTEFSGDRRYDIIVSNPPYVTESEKNEMEPNVL 201 Query: 189 DFDPRISL---DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245 D++P ++L D D L YR IA L+ G EI +++++ + Sbjct: 202 DWEPGLALFVPDN--DPLLFYRRIASLGREMLSLHGKLYFEINRAYGEEILQMLGGKGYR 259 Query: 246 LVNAFKDYGGNDRVLLFCR 264 + KD GNDR++ R Sbjct: 260 DLRLIKDISGNDRIVTAKR 278 >gi|146296535|ref|YP_001180306.1| HemK family modification methylase [Caldicellulosiruptor saccharolyticus DSM 8903] gi|145410111|gb|ABP67115.1| modification methylase, HemK family [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 289 Score = 89.4 bits (220), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 59/185 (31%), Positives = 96/185 (51%), Gaps = 12/185 (6%) Query: 60 FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119 F + + D PR +TE L++ A+ +++ + LD+GTG+G + +AL K Sbjct: 88 FMGLEFYVDEDVLIPRFDTETLIEVAIEL----FNRKENLNFLDVGTGSGCIAIALCK-- 141 Query: 120 PFF--KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYI 175 F K + VDIS AL +A+ NA NGV ++ ++S+ F ++ FD I SNPPYI Sbjct: 142 -FLDCKVIAVDISENALRVAEKNAKLNGVFDKIHFVKSNLFENIPPSLKFDAIFSNPPYI 200 Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235 + L V +P+ +L +GL +++ IA ++L K G E+GY Q V Sbjct: 201 SENEISMLDKRVLK-EPKQALFSKENGLYYFQEIAKNARQYLKKGGYIIFEVGYRQSQHV 259 Query: 236 VRIFE 240 +I + Sbjct: 260 KKILK 264 >gi|297192416|ref|ZP_06909814.1| methytransferase [Streptomyces pristinaespiralis ATCC 25486] gi|297151357|gb|EDY61859.2| methytransferase [Streptomyces pristinaespiralis ATCC 25486] Length = 272 Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 61/212 (28%), Positives = 92/212 (43%), Gaps = 6/212 (2%) Query: 33 RQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPR 92 R L + R + + +LGW +F VR+ + F PR +E LV A+A + PR Sbjct: 35 RDPHELAAMVERRIAGLPLEHVLGWAEFCGVRVAVDPGVFVPRRRSEFLVGRAIALAPPR 94 Query: 93 IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152 ++DL G+GA+ A+L+ + DI A+ A N G Sbjct: 95 PV------VVDLCCGSGALGAAVLRAVGAGELHAADIESAAVRCALRNVGPVGGRVHQGD 148 Query: 153 LQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212 L + + G DV+++N PY+ + + L E RDF+P ++LDGG DGL R + Sbjct: 149 LYDPLPAGLAGRVDVLIANAPYVPTGEIGLLPPEARDFEPLVALDGGPDGLGIQRRVTAR 208 Query: 213 VSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 R L G +E Q V F L Sbjct: 209 AGRWLAPGGSLLIETSERQAPSTVAAFTRHGL 240 >gi|227892679|ref|ZP_04010484.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Lactobacillus ultunensis DSM 16047] gi|227865550|gb|EEJ72971.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Lactobacillus ultunensis DSM 16047] Length = 280 Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 76/258 (29%), Positives = 126/258 (48%), Gaps = 19/258 (7%) Query: 11 LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70 L L+ + + D VL D Q I + K S ILG+ F ++ + Sbjct: 28 LAERLNLTPSEFEMKQDMVLSDEQVKQANKDIKKLAKGVSPQYILGYAWFLGYKIMVQRG 87 Query: 71 TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV--- 127 PR ETE LV+ AL SL + ++LDLGTG+G + +AL KE+ KG+ Sbjct: 88 VLIPRFETEELVEWALQ-SL-----KSGNKVLDLGTGSGCITVALAKEAEK-KGIKALTL 140 Query: 128 ---DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184 D++ AL ++ N + + T +++ +E FD+I+SNPPYI++ + + Sbjct: 141 YASDVTDTALRTSEENFLNYHLD--VTTRKANVLIGLEK-FDLIISNPPYIKTTEKNVMD 197 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 V +P+ +L G DGL Y+ A V HLN G +E G++++ + +F +++L Sbjct: 198 KNVLQNEPKEALFAGKDGLDFYKKFAKQVRDHLNSHGEFFLEFGFSEEEQLKELF-AKEL 256 Query: 245 --FLVNAFKDYGGNDRVL 260 F + KD G R++ Sbjct: 257 PDFDIEFRKDMAGKPRMI 274 >gi|191638151|ref|YP_001987317.1| Protoporphyrinogen oxidase (Putative) [Lactobacillus casei BL23] gi|301066210|ref|YP_003788233.1| methylase of polypeptide chain release factor [Lactobacillus casei str. Zhang] gi|190712453|emb|CAQ66459.1| Protoporphyrinogen oxidase (Putative) [Lactobacillus casei BL23] gi|300438617|gb|ADK18383.1| Methylase of polypeptide chain release factor [Lactobacillus casei str. Zhang] gi|327382181|gb|AEA53657.1| HemK protein [Lactobacillus casei LC2W] gi|327385378|gb|AEA56852.1| HemK protein [Lactobacillus casei BD-II] Length = 276 Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 57/201 (28%), Positives = 94/201 (46%), Gaps = 8/201 (3%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101 + R + E I+G F+ ++ PR ETE LV E+R Sbjct: 61 VERLRQFEPAQYIVGVAPFFGELFKVTPAVLIPRFETEELVAWVAE------EQRTAQTG 114 Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 LDLGTG+GA+ L L ++ P D+S +AL +AK NA V+ +F SD F+++ Sbjct: 115 LDLGTGSGAIGLTLARKLPQTTMTLSDVSPEALAVAKQNAKEQQVAVQFTV--SDLFAAL 172 Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221 +D +V+N PYI + ++P+++L G GL+ + + +HL G Sbjct: 173 PARYDFVVTNLPYIAPEETPVMDQSTLRYEPKLALFAGHHGLAVFEQFVAALPQHLTAGG 232 Query: 222 LCSVEIGYNQKVDVVRIFESR 242 +E GY Q+ + +F + Sbjct: 233 AAYLEFGYRQEPALRELFAKQ 253 >gi|187734558|ref|YP_001876670.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Akkermansia muciniphila ATCC BAA-835] gi|187424610|gb|ACD03889.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Akkermansia muciniphila ATCC BAA-835] Length = 301 Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 84/279 (30%), Positives = 122/279 (43%), Gaps = 42/279 (15%) Query: 7 SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66 +H C T L S D +++ + L + R E + +LG +F+ Sbjct: 32 AHVLHCNRTALYSQF-----DRPVEEAELAPLRELLKRRAAGEPLQHLLGVTEFFRRDFL 86 Query: 67 LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG-- 124 + PRPETE LV+ L +P VRILD+GTG+G + + L E G Sbjct: 87 TDARALIPRPETEELVEMVLK-KIPD----HPVRILDMGTGSGVIGVTLALELKERAGEV 141 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV----------------EG----- 163 V DIS +AL++A NA+ G R T+Q++ F+++ EG Sbjct: 142 VLADISPQALDLALENAMRLGA--RVSTIQTNLFANISQEKTDPHAEDADSAPEGKKGEN 199 Query: 164 ----LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 LFDVIV+N PYI + L EV DP +L GG G +LN+ Sbjct: 200 GRNMLFDVIVANLPYIAEG--EKLAPEVMK-DPHTALFGGPKGWEIIERFLARARDYLNE 256 Query: 220 DGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258 DG ++EIGY+Q V +I + + KD G R Sbjct: 257 DGFVALEIGYDQASVVTQIMDGYGYNYIEVLKDMSGVSR 295 >gi|114330608|ref|YP_746830.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Nitrosomonas eutropha C91] gi|114307622|gb|ABI58865.1| [LSU ribosomal protein L3P]-glutamine N5-methyltransferase [Nitrosomonas eutropha C91] Length = 306 Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 54/142 (38%), Positives = 82/142 (57%), Gaps = 6/142 (4%) Query: 93 IEKRDVVRILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVSERF 150 I+ D+ LDL TG+G CLA+L F + VDIS AL++A N + R Sbjct: 136 IDPHDINSALDLCTGSG--CLAILLAHAFEQAQIDAVDISSDALDVASINIRNYDLMNRI 193 Query: 151 DTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209 + + +D F+ ++G +D+I+SNPPY+ +V + L E R +P I+L GG+DGL I Sbjct: 194 NLIHADLFTRLQGKRYDLIISNPPYVNAVSMAMLPEEYR-HEPAIALAGGLDGLDIVHRI 252 Query: 210 ADGVSRHLNKDGLCSVEIGYNQ 231 + HL ++GL +EIG+NQ Sbjct: 253 LREAADHLTENGLLIMEIGHNQ 274 >gi|309812205|ref|ZP_07705963.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Dermacoccus sp. Ellin185] gi|308433892|gb|EFP57766.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Dermacoccus sp. Ellin185] Length = 483 Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 72/219 (32%), Positives = 105/219 (47%), Gaps = 14/219 (6%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110 + + G F ++ L + F PRPETE+LVD+AL + RI+DL TG+GA Sbjct: 73 LQHLTGRAPFRSLELRVGPGVFVPRPETEMLVDAALEAAP------HGGRIVDLCTGSGA 126 Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDV 167 + LA+ E P + V++S +A A N G++ D Q+ +EG FDV Sbjct: 127 IALAIKAERPDLEVYAVELSEEAAAWAALNCKQIGLTVNLSVEDARQA--LPELEGSFDV 184 Query: 168 IVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI-DGLSHYRTIADGVSRHLNKDGLCSVE 226 +VSNPPY+ + +V + EV + DP I+L GG DGL IA+ + L GL +E Sbjct: 185 VVSNPPYVPTGMV-PIDPEVAEHDPEIALYGGSEDGLRFPLEIAERAAHLLKPGGLLVME 243 Query: 227 IGYNQKVDVVRIFESRKLF-LVNAFKDYGGNDRVLLFCR 264 Q + R+ F D G R+ L R Sbjct: 244 HADAQGESLPEALLDRRGFEWARDEADLAGKPRMTLARR 282 >gi|325913020|ref|ZP_08175393.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Lactobacillus iners UPII 60-B] gi|325477700|gb|EGC80839.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Lactobacillus iners UPII 60-B] Length = 279 Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 77/258 (29%), Positives = 124/258 (48%), Gaps = 18/258 (6%) Query: 11 LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70 L L+ Q + D L Q + + + K S I+G F + + Sbjct: 27 LAERQNLTPSQYRLQLDQDLPKEQLTQIKKDLSKLHKGMSPQYIVGHAWFLGYSIDVHPG 86 Query: 71 TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV----- 125 PR ETE LV AL + +D ++LDLGTG+GA+ +AL K++ K + Sbjct: 87 VLIPRFETEELVTWALDYL------KDNSKVLDLGTGSGAITVALAKKAEC-KNINNIVY 139 Query: 126 -GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184 DI+ AL ++ N + +++ T ++D +E FD+I+SNPPYI++ D + Sbjct: 140 YASDITDSALRQSEENFLKFNLNDII-TRKADVLIGLEK-FDLIISNPPYIKNSEKDLMD 197 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 V +P +L G DGL YR V +HLNKDG +E G++QK + +F +++L Sbjct: 198 QNVIKNEPEEALFAGADGLDFYRRFVKQVPKHLNKDGHFFLEFGFSQKDLLAELF-AKEL 256 Query: 245 --FLVNAFKDYGGNDRVL 260 F + D G R++ Sbjct: 257 PEFTIEFKNDLAGKPRMV 274 >gi|227535365|ref|ZP_03965414.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|227186961|gb|EEI67028.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Lactobacillus paracasei subsp. paracasei ATCC 25302] Length = 276 Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 57/201 (28%), Positives = 94/201 (46%), Gaps = 8/201 (3%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101 + R + E I+G F+ ++ PR ETE LV E+R Sbjct: 61 VERLRQFEPAQYIVGVAPFFGELFKVTPAVLIPRFETEELVAWVAE------EQRTAQTG 114 Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 LDLGTG+GA+ L L ++ P D+S +AL +AK NA V+ +F SD F+++ Sbjct: 115 LDLGTGSGAIGLTLARKLPQTTMTLSDVSPEALAVAKQNAKEQQVAVQFTV--SDLFTAL 172 Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221 +D +V+N PYI + ++P+++L G GL+ + + +HL G Sbjct: 173 PARYDFVVTNLPYIAPEETPVMDQSTLRYEPKLALFAGHHGLAVFEQFVAALPQHLTAGG 232 Query: 222 LCSVEIGYNQKVDVVRIFESR 242 +E GY Q+ + +F + Sbjct: 233 AAYLEFGYRQEPALRELFAKQ 253 >gi|23100452|ref|NP_693919.1| protoporphyrinogen oxidase [Oceanobacillus iheyensis HTE831] gi|22778685|dbj|BAC14953.1| protoporphyrinogen oxidase [Oceanobacillus iheyensis HTE831] Length = 287 Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 67/210 (31%), Positives = 104/210 (49%), Gaps = 16/210 (7%) Query: 60 FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119 FY ++ PRPETE LV + +E+ + I+D+GTG+G + + L E Sbjct: 80 FYGRVFEVNQHVLIPRPETEELVQQVIQ-QAKTMEQP--ITIVDVGTGSGVIAITLALEL 136 Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW---FSSVEGLFDVIVSNPPYIE 176 P + DIS KAL +AK NA F L+ ++ F + D+IVSNPPYI Sbjct: 137 PGSRVFATDISEKALAVAKRNAQAMKADVTF--LEGNFLEPFLDINQTADIIVSNPPYIP 194 Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV-SRHLNKDGLCSVEIGYNQKVDV 235 + L V++FDP ++L +GL+ Y I + + L+ + + EIG++Q + Sbjct: 195 WSQSEELQDTVKNFDPELALFAENNGLAAYHAILRQMKTMKLSDQSILAFEIGFDQSEAI 254 Query: 236 VRI----FESRKLFLVNAFKDYGGNDRVLL 261 + SR++F V KD DR+LL Sbjct: 255 TNMIRQNLPSREVFTV---KDINDKDRILL 281 >gi|270668928|ref|ZP_06222563.1| HemK family protein [Haemophilus influenzae HK1212] gi|270316634|gb|EFA28442.1| HemK family protein [Haemophilus influenzae HK1212] Length = 156 Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 56/140 (40%), Positives = 81/140 (57%), Gaps = 11/140 (7%) Query: 100 RILDLGTGTGAVCLALLKESPF--------FKGVGVDISCKALEIAKSNAVTNGVSERFD 151 RILDLGTGTGA+ LAL E F + +GVD+ + +A+SNA N ++ +F Sbjct: 14 RILDLGTGTGAIALALASELSFICQKRLISLEIIGVDLMPDVVALAQSNAERNQLNVQF- 72 Query: 152 TLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIAD 211 LQS WF ++ G FD+IVSNPPYI++ +VR F+P +L G + R I + Sbjct: 73 -LQSRWFDNITGKFDLIVSNPPYIDAQDEHLHQGDVR-FEPLSALVANDAGYADLRHIIE 130 Query: 212 GVSRHLNKDGLCSVEIGYNQ 231 S +LN +G+ +E G+ Q Sbjct: 131 LASSYLNSNGVLLLEHGWQQ 150 >gi|312874596|ref|ZP_07734620.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Lactobacillus iners LEAF 2053A-b] gi|311089826|gb|EFQ48246.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Lactobacillus iners LEAF 2053A-b] Length = 279 Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 77/258 (29%), Positives = 124/258 (48%), Gaps = 18/258 (6%) Query: 11 LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70 L L+ Q + D L Q + + + K S I+G F + + Sbjct: 27 LAERQNLTPSQYHLQLDQDLPKEQLTQIKKDLNKLHKGMSPQYIVGHAWFLGYSIDVHPG 86 Query: 71 TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV----- 125 PR ETE LV AL + +D ++LDLGTG+GA+ +AL K++ K + Sbjct: 87 VLIPRFETEELVTWALDYL------KDNSKVLDLGTGSGAITVALAKKAEC-KNINNIVY 139 Query: 126 -GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184 DI+ AL ++ N + +++ T ++D +E FD+I+SNPPYI++ D + Sbjct: 140 YASDITDSALRQSEENFLKFNLNDII-TRKADALIGLEK-FDLIISNPPYIKNSEKDLMD 197 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 V +P +L G DGL YR V +HLNKDG +E G++QK + +F +++L Sbjct: 198 QNVIKNEPEEALFAGADGLDFYRRFVKQVPKHLNKDGHFFLEFGFSQKDLLAELF-AKEL 256 Query: 245 --FLVNAFKDYGGNDRVL 260 F + D G R++ Sbjct: 257 PEFTIEFKNDLAGKPRMV 274 >gi|297161741|gb|ADI11453.1| HemK family modification methylase [Streptomyces bingchenggensis BCW-1] Length = 268 Score = 89.0 bits (219), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 64/228 (28%), Positives = 101/228 (44%), Gaps = 20/228 (8%) Query: 31 DDRQRFFLTNA---------IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELL 81 +D R +T A + R + + +LGW +F+ +R+ + F PR TE L Sbjct: 26 EDEARLLVTTARTPDELATMVDRRVAGLPLEHVLGWAEFHGLRIAVDHGVFVPRRRTEYL 85 Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL----KESPFFKGVGVDISCKALEIA 137 VD A+ + P ++DL G+GAV AL+ +SP + DI A+ A Sbjct: 86 VDQAVGLARPG------AVVVDLCCGSGAVGAALITALGADSPI-ELYAADIEPAAVRCA 138 Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197 + N + L +++ G DV+V+N PY+ + + L E RD +PR++LD Sbjct: 139 RRNIPADKGRVYEGDLYEPLPAALRGRVDVLVANAPYVPTDAIRLLPPEARDHEPRVALD 198 Query: 198 GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245 GG DGL R + ++ L DG +E Q F L Sbjct: 199 GGADGLDVQRRVLAEAAQWLAPDGHLLIETSEGQAPRTADTFARHGLI 246 >gi|307327907|ref|ZP_07607089.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptomyces violaceusniger Tu 4113] gi|306886425|gb|EFN17429.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptomyces violaceusniger Tu 4113] Length = 281 Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 68/221 (30%), Positives = 102/221 (46%), Gaps = 13/221 (5%) Query: 26 PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85 PD+ D R A+ R E + I G F + L + F PRPETE S Sbjct: 46 PDADFDAR----YWEAVARREAREPLQHITGRAFFRYLELQVGPGVFVPRPETE----SV 97 Query: 86 LAFSLPRIEKRDVVR--ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143 + +++ + DVV I+DL G+GA+ LAL +E P + V++ AL A+ N Sbjct: 98 VGWAIDAVRAMDVVEPLIVDLCAGSGAIALALAQEVPRSRVHAVELDEGALRWARKNVQG 157 Query: 144 NGVS-ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202 + V D L + ++G D+++SNPPYI + + E RD DP+++L G DG Sbjct: 158 SRVVLHHADALTA--LPELDGQVDLVISNPPYIPLTEWEYVAPEARDHDPQLALFSGEDG 215 Query: 203 LSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 L R + R L G+ +E Q V IF + Sbjct: 216 LDVIRGLERTAHRLLRPGGVVVIEHADTQGGQVPWIFTEER 256 >gi|239631747|ref|ZP_04674778.1| methylase of polypeptide chain release factor [Lactobacillus paracasei subsp. paracasei 8700:2] gi|239526212|gb|EEQ65213.1| methylase of polypeptide chain release factor [Lactobacillus paracasei subsp. paracasei 8700:2] Length = 286 Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 57/201 (28%), Positives = 94/201 (46%), Gaps = 8/201 (3%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101 + R + E I+G F+ ++ PR ETE LV E+R Sbjct: 71 VERLRQSEPAQYIVGVAPFFGELFKVTPAVLIPRFETEELVAWVAE------EQRTAQTG 124 Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 LDLGTG+GA+ L L ++ P D+S +AL +AK NA V+ +F SD F+++ Sbjct: 125 LDLGTGSGAIGLTLARKLPQTTMTLSDVSPEALAVAKQNAKEQQVAVQFTV--SDLFAAL 182 Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221 +D +V+N PYI + ++P+++L G GL+ + + +HL G Sbjct: 183 PARYDFVVTNLPYIAPEETPVMDQSTLRYEPKLALFAGHHGLAVFEQFVAALPQHLTAGG 242 Query: 222 LCSVEIGYNQKVDVVRIFESR 242 +E GY Q+ + +F + Sbjct: 243 AAYLEFGYRQEPALRELFAKQ 263 >gi|312873846|ref|ZP_07733889.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Lactobacillus iners LEAF 2052A-d] gi|311090628|gb|EFQ49029.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Lactobacillus iners LEAF 2052A-d] Length = 279 Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 77/258 (29%), Positives = 124/258 (48%), Gaps = 18/258 (6%) Query: 11 LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70 L L+ Q + D L Q + + + K S I+G F + + Sbjct: 27 LAERQNLTPSQYRLQLDQDLPKEQLTQIKKDLNKLHKGMSPQYIVGHAWFLGYSIDVHPG 86 Query: 71 TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV----- 125 PR ETE LV AL + +D ++LDLGTG+GA+ +AL K++ K + Sbjct: 87 VLIPRFETEELVTWALDYL------KDNSKVLDLGTGSGAITVALAKKAEC-KNINNIVY 139 Query: 126 -GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184 DI+ AL ++ N + +++ T ++D +E FD+I+SNPPYI++ D + Sbjct: 140 YASDITDSALRQSEENFLKFNLNDII-TRKADALIGLEK-FDLIISNPPYIKNSEKDLMD 197 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 V +P +L G DGL YR V +HLNKDG +E G++QK + +F +++L Sbjct: 198 QNVIKNEPEEALFAGADGLDFYRRFVKQVPKHLNKDGHFFLEFGFSQKDLLAELF-AKEL 256 Query: 245 --FLVNAFKDYGGNDRVL 260 F + D G R++ Sbjct: 257 PEFTIEFKNDLAGKPRMV 274 >gi|312871966|ref|ZP_07732048.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Lactobacillus iners LEAF 2062A-h1] gi|311092543|gb|EFQ50905.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Lactobacillus iners LEAF 2062A-h1] Length = 279 Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 77/258 (29%), Positives = 124/258 (48%), Gaps = 18/258 (6%) Query: 11 LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70 L L+ Q + D L Q + + + K S I+G F + + Sbjct: 27 LAERQNLTPSQYRLQLDQDLPKEQLTQIKKDLNKLHKGMSPQYIVGHAWFLGYSIDVHPG 86 Query: 71 TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV----- 125 PR ETE LV AL + +D ++LDLGTG+GA+ +AL K++ K + Sbjct: 87 VLIPRFETEELVTWALDYL------KDNSKVLDLGTGSGAITVALAKKAEC-KNINNIVY 139 Query: 126 -GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184 DI+ AL ++ N + +++ T ++D +E FD+I+SNPPYI++ D + Sbjct: 140 YASDITDSALRQSEENFLKFNLNDII-TRKADALIGLEK-FDLIISNPPYIKNSEKDLMD 197 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 V +P +L G DGL YR V +HLNKDG +E G++QK + +F +++L Sbjct: 198 QNVIKNEPEEALFAGADGLDFYRRFVKQVPKHLNKDGHFFLEFGFSQKDLLAELF-AKEL 256 Query: 245 --FLVNAFKDYGGNDRVL 260 F + D G R++ Sbjct: 257 PEFAIEFKNDLAGKPRMV 274 >gi|145342148|ref|XP_001416155.1| protein methyltransferase [Ostreococcus lucimarinus CCE9901] gi|144576380|gb|ABO94448.1| protein methyltransferase [Ostreococcus lucimarinus CCE9901] Length = 398 Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 77/219 (35%), Positives = 108/219 (49%), Gaps = 24/219 (10%) Query: 57 WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI----------LDLGT 106 WRD + T+++ PRPETELL+D A + L +E LDLGT Sbjct: 164 WRD---MEFTVNTSVLIPRPETELLIDFACEW-LRELESNTENHTMNYNLLSGPWLDLGT 219 Query: 107 GTGAVCLALLKE-----SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 G+G + +AL KE + VD+S ALE+A+ NA NGV + TL WF+ + Sbjct: 220 GSGILAIALAKELQRKCADASSVYAVDVSVAALELARDNARRNGVQDSIKTLHGSWFNPI 279 Query: 162 EG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS-HYRTIADGVSRHLN 218 + F I++NPPYI + +++ L EV +P ++LDGG S H TI V L Sbjct: 280 KKDVRFTGILTNPPYIPTDLLESLQPEVCSHEPWLALDGGGGDGSAHLVTICRDVKNFLL 339 Query: 219 KDGLCSVEI-GYNQKVDVVRIFESRKLFL-VNAFKDYGG 255 GL +VE G Q V + S + F V+ DY G Sbjct: 340 PGGLFAVETHGLEQARLVQHLLNSTEAFRDVHLKADYSG 378 >gi|325184917|emb|CCA19409.1| methylase subunit of polypeptide release factor puta [Albugo laibachii Nc14] Length = 334 Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 84/280 (30%), Positives = 135/280 (48%), Gaps = 42/280 (15%) Query: 18 SSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPE 77 SS+ + + D + D + + I R K E I I G ++F+++ + S+T PR + Sbjct: 60 SSNSLFLQLDREVSDGENTNFLSFIRRRCKGEPIAYITGTKEFWSMEFRVDSNTLIPRAD 119 Query: 78 TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137 +E+LV+ A+ P+ + + ILD+GTG+G + L+ L E P G+G+D+ KAL+IA Sbjct: 120 SEVLVE-AITNEYPKDAR---LGILDIGTGSGCLLLSALSEYPRAWGLGIDVCSKALDIA 175 Query: 138 KSNAVTNGVSERFDTLQSDWFS----SVEGL--------FDVIVSNPPYI---ESVIVDC 182 + NA + + +R D ++ D S EGL FDVI+ NPPYI E +VD Sbjct: 176 RENARHHSLEDRCDFMECDLRDISSFSREGLDESFPSAPFDVILFNPPYIPQSERFMVD- 234 Query: 183 LGLEVRDFDPRISL-----DGGID-GLSHYRTIADGVSRHLN-----------KDGLCSV 225 EV ++P ++L D D GL+ Y + V R L + + + Sbjct: 235 --EEVLIYEPHLALFPSSNDVNNDFGLNLYECLQRVVLRLLGNVHSAERSTTFRKQIACM 292 Query: 226 EIGYNQKVDVVRIFESR---KLFLVNAFKDYGGNDRVLLF 262 EIG ++ + V+ + KL D R LLF Sbjct: 293 EIGSQKQAEAVKALFAHLEPKLQFKKTLFDIENRHRGLLF 332 >gi|329921114|ref|ZP_08277637.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Lactobacillus iners SPIN 1401G] gi|328935021|gb|EGG31510.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Lactobacillus iners SPIN 1401G] Length = 279 Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 77/258 (29%), Positives = 124/258 (48%), Gaps = 18/258 (6%) Query: 11 LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70 L L+ Q + D L Q + + + K S I+G F + + Sbjct: 27 LAERQNLTPSQYRLQLDQDLPKEQLTQIKKDLNKLHKGMSPQYIVGHAWFLGYSIDVHPG 86 Query: 71 TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV----- 125 PR ETE LV AL + +D ++LDLGTG+GA+ +AL K++ K + Sbjct: 87 VLIPRFETEELVTWALDYL------KDNSKVLDLGTGSGAITVALAKKAEC-KNINNIVY 139 Query: 126 -GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184 DI+ AL ++ N + +++ T ++D +E FD+I+SNPPYI++ D + Sbjct: 140 YASDITDSALRQSEENFLKFNLNDII-TRKADVLIGLEK-FDLIISNPPYIKNSEKDLMD 197 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 V +P +L G DGL YR V +HLNKDG +E G++QK + +F +++L Sbjct: 198 QNVIKNEPEEALFAGADGLDFYRRFVKQVPKHLNKDGHFFLEFGFSQKDLLAELF-AKEL 256 Query: 245 --FLVNAFKDYGGNDRVL 260 F + D G R++ Sbjct: 257 PEFTIEFKNDLAGKPRMV 274 >gi|302518708|ref|ZP_07271050.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptomyces sp. SPB78] gi|302427603|gb|EFK99418.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptomyces sp. SPB78] Length = 302 Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 64/214 (29%), Positives = 98/214 (45%), Gaps = 5/214 (2%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101 + R + E + ++G F+ +R+ + F PR +E LV A +L + V + Sbjct: 50 VARRVAGEPLEHVVGHAVFHGLRIAVGPGVFVPRRRSEFLV----ARALDGVRAEGAVTL 105 Query: 102 LDLGTGTGAVCLALLKE-SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 LDL G+GA+ LAL P D+ AL A+ N G L + ++ Sbjct: 106 LDLCCGSGALGLALRTALGPRATLHAADVDPGALRWARRNLAPVGAHVHEGDLYAPLPAA 165 Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220 + G DV+ +N PY+ S V L E R +P ++LDGG DGL R +A+ + L Sbjct: 166 LRGRVDVLTANVPYVPSEEVRLLPAEARAHEPLVALDGGTDGLDLVRRVAEEAATWLAPG 225 Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYG 254 G VE G Q +V IF + L A ++ G Sbjct: 226 GRLLVESGERQAPEVAGIFTAAGLHAEIAHEEEG 259 >gi|170781878|ref|YP_001710210.1| putative methylase [Clavibacter michiganensis subsp. sepedonicus] gi|169156446|emb|CAQ01594.1| putative methylase [Clavibacter michiganensis subsp. sepedonicus] Length = 291 Score = 89.0 bits (219), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 78/265 (29%), Positives = 115/265 (43%), Gaps = 12/265 (4%) Query: 6 DSHSFLCRVTGLSSHQVIVDP--DSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63 D+ + V GLS QV + +D R + R + E + I G F ++ Sbjct: 33 DAELLVGHVLGLSRGQVQSRAITRAAVDARDAERVLELTARRARREPLQHITGVAHFRSL 92 Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 L + F PRPETE + + LA D +DLGTG+GA+ LAL E P + Sbjct: 93 ELLVGPGVFVPRPETEHV--AQLAIDALSAAPGDAPVAVDLGTGSGALALALATEVPHAR 150 Query: 124 GVGVDISCKALEIAKSNA--VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181 +++S +A N + V R L +D F ++G V+VSNPPYI VD Sbjct: 151 VHAIEVSPEAHAWTARNVERLAPRVDLRLGDL-ADAFPELDGTVSVVVSNPPYIP---VD 206 Query: 182 CLG--LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 + EVR DP ++L GG DGL R ++ R L+ G +E G Q + + Sbjct: 207 AVPRDPEVRLHDPALALYGGADGLDVVRLVSTTARRLLHPGGALVIEHGELQGQAIRALL 266 Query: 240 ESRKLFLVNAFKDYGGNDRVLLFCR 264 ++ +D DR R Sbjct: 267 DADGWRATATHQDLTRRDRATTALR 291 >gi|308380039|ref|ZP_07488465.2| hypothetical protein hemK [Mycobacterium tuberculosis SUMu011] gi|308399357|ref|ZP_07492977.2| hypothetical protein hemK [Mycobacterium tuberculosis SUMu012] gi|18275934|sp|Q10602|HEMK_MYCTU RecName: Full=Protein methyltransferase hemK homolog; AltName: Full=M.MtuHHemKP gi|308362831|gb|EFP51682.1| hypothetical protein hemK [Mycobacterium tuberculosis SUMu011] gi|308366497|gb|EFP55348.1| hypothetical protein hemK [Mycobacterium tuberculosis SUMu012] Length = 304 Score = 89.0 bits (219), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 74/221 (33%), Positives = 103/221 (46%), Gaps = 13/221 (5%) Query: 50 SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109 + ++G F V L + F PRPETE ++ A A SLP R + I+D TG+G Sbjct: 67 PLQHLIGTVSFGPVVLHVGPGVFVPRPETEAILAWATAQSLP---ARPL--IVDACTGSG 121 Query: 110 AVCLALLKESPFF----KGVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSDWFSSVEGL 164 A+ +AL + + +G+D S AL+ A+ NA V R D ++G Sbjct: 122 ALAVALAQHRANLGLKARIIGIDDSDCALDYARRNAAGTPVELVRADVTTPRLLPELDGQ 181 Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224 D++VSNPPYI V L EV DP +L GG DG++ + R L GL + Sbjct: 182 VDLMVSNPPYIPDAAV--LEPEVAQHDPHHALFGGPDGMTVISAVVGLAGRWLRPGGLFA 239 Query: 225 VEIGYNQKVDVVRIFESRKLFL-VNAFKDYGGNDRVLLFCR 264 VE V + S KLF+ V A KD G R + R Sbjct: 240 VEHDDTTSSSTVDLVSSTKLFVDVQARKDLAGRPRFVTAMR 280 >gi|238855956|ref|ZP_04646242.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Lactobacillus jensenii 269-3] gi|260664673|ref|ZP_05865525.1| protein-(glutamine-N5) methyltransferase, release factor-specific protein [Lactobacillus jensenii SJ-7A-US] gi|282934363|ref|ZP_06339630.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Lactobacillus jensenii 208-1] gi|313471877|ref|ZP_07812369.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Lactobacillus jensenii 1153] gi|238831429|gb|EEQ23780.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Lactobacillus jensenii 269-3] gi|239529208|gb|EEQ68209.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Lactobacillus jensenii 1153] gi|260561738|gb|EEX27710.1| protein-(glutamine-N5) methyltransferase, release factor-specific protein [Lactobacillus jensenii SJ-7A-US] gi|281301573|gb|EFA93850.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Lactobacillus jensenii 208-1] Length = 280 Score = 89.0 bits (219), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 63/198 (31%), Positives = 99/198 (50%), Gaps = 14/198 (7%) Query: 50 SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109 S ILG+ F ++ + PR ETE LV+ AL D ++ILDLGTG+G Sbjct: 67 SPQYILGYAWFLGYKIMVQRGVLIPRFETEELVEWALKHL------HDGMKILDLGTGSG 120 Query: 110 AVCLALLKESPF-----FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL 164 A+ +AL KE+ DIS AL I + N + + +++ +E Sbjct: 121 AIMVALAKEAAKKDIKDLTLYASDISDSALRICEENFLKFALD--VTVRKANVLIGLEK- 177 Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224 FD+I+SNPPYI+ + + V +P +L GG DGL YR A + +HL G Sbjct: 178 FDLIISNPPYIKPEEKNLMDSNVLQNEPEEALFGGEDGLEFYRRFAKQIRKHLTSQGEFF 237 Query: 225 VEIGYNQKVDVVRIFESR 242 +E G+++K ++ ++F + Sbjct: 238 LEFGFSEKDELAKLFATE 255 >gi|225024197|ref|ZP_03713389.1| hypothetical protein EIKCOROL_01069 [Eikenella corrodens ATCC 23834] gi|224943222|gb|EEG24431.1| hypothetical protein EIKCOROL_01069 [Eikenella corrodens ATCC 23834] Length = 166 Score = 89.0 bits (219), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 49/133 (36%), Positives = 74/133 (55%), Gaps = 1/133 (0%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LDL TG+G + + P + D+S +ALE+A N G+ ER +QSD F++ Sbjct: 1 MLDLCTGSGCLAIQAACHYPEAQVDAADLSPEALEVAAINVANYGLEERVRLIQSDLFAN 60 Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220 + G +D+I+SNPPY+ + V L E +P ++L G DGL R I R LN Sbjct: 61 LSGTYDLIISNPPYVNAESVAALPAEYL-HEPEMALGSGEDGLDATRQILQHAPRFLNPR 119 Query: 221 GLCSVEIGYNQKV 233 G+ VEIG+N++ Sbjct: 120 GVLLVEIGHNREA 132 >gi|302191108|ref|ZP_07267362.1| protoporphyrinogen oxidase [Lactobacillus iners AB-1] Length = 279 Score = 89.0 bits (219), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 77/258 (29%), Positives = 124/258 (48%), Gaps = 18/258 (6%) Query: 11 LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70 L L+ Q + D L Q + + + K S I+G F + + Sbjct: 27 LAERQNLTPSQYHLQLDQDLPKEQLTQIKKDLNKLHKGMSPQYIVGHAWFLGYSIDVHPG 86 Query: 71 TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV----- 125 PR ETE LV AL + +D ++LDLGTG+GA+ +AL K++ K + Sbjct: 87 VLIPRFETEELVTWALDYL------KDNSKVLDLGTGSGAITVALAKKAEC-KNINNIVY 139 Query: 126 -GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184 DI+ AL ++ N + +++ T ++D +E FD+I+SNPPYI++ D + Sbjct: 140 YASDITDSALRQSEENFLKFNLNDII-TRKADVLIGLEK-FDLIISNPPYIKNSEKDLMD 197 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 V +P +L G DGL YR V +HLNKDG +E G++QK + +F +++L Sbjct: 198 QNVIKNEPEEALFAGADGLDFYRRFVKQVPKHLNKDGHFFLEFGFSQKDLLAELF-AKEL 256 Query: 245 --FLVNAFKDYGGNDRVL 260 F + D G R++ Sbjct: 257 PEFTIEFKNDLAGKPRMV 274 >gi|295135419|ref|YP_003586095.1| modification methylase HemK [Zunongwangia profunda SM-A87] gi|294983434|gb|ADF53899.1| modification methylase HemK [Zunongwangia profunda SM-A87] Length = 283 Score = 88.6 bits (218), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 75/249 (30%), Positives = 118/249 (47%), Gaps = 12/249 (4%) Query: 17 LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRP 76 L+ Q+ ++P+ L+D + A+ + E I I+G +F+++ ++ PRP Sbjct: 37 LNRLQIALEPNKKLNDTEVSEFEGALEKLRVFEPIQYIIGETEFFSLSFKVTPGVLIPRP 96 Query: 77 ETELLVDSAL-AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135 ETE LV L SL +++ + ILD+GTG+G + ++L K P + +DIS +AL+ Sbjct: 97 ETEELVQWILDEVSL---KQQQDLHILDIGTGSGCIPISLKKHLPKAQISAIDISEEALK 153 Query: 136 IAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDP 192 +A N N VS D L + S FDVIVSNPPY+ + + V ++P Sbjct: 154 VANLNTEKNKVSVHLVHQDILSTQKLSRQ---FDVIVSNPPYVRELEKAEMQQNVLQYEP 210 Query: 193 RISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK 251 +L + L Y I L+K+GL EI + + E F K Sbjct: 211 ETALYVKDENPLLFYNKITKLAQEGLSKNGLLFFEINQYLGEETKTMVEEHD-FRAELRK 269 Query: 252 DYGGNDRVL 260 D GN R+L Sbjct: 270 DMFGNFRML 278 >gi|291242281|ref|XP_002741036.1| PREDICTED: HemK methyltransferase family member 1-like [Saccoglossus kowalevskii] Length = 228 Score = 88.6 bits (218), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 57/174 (32%), Positives = 87/174 (50%), Gaps = 10/174 (5%) Query: 54 ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113 +LG DF ++ L L F PRPETE LV+ L + PRI + L++G G+GA+ L Sbjct: 6 VLGEWDFRDLTLKLRPPVFIPRPETEELVEMILQYHRPRIN----LHFLEVGCGSGAISL 61 Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS------VEGLFDV 167 +LL E P G+ +D S A+++ + NA + +R + S + G +D Sbjct: 62 SLLHEIPQAIGIAIDQSHAAVKLTEHNATRLNLHDRLTVHNIEVVDSFKIPNDIAGPYDA 121 Query: 168 IVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221 I+SNPPYI + L E+ ++ +L GG DGL + I L +G Sbjct: 122 IISNPPYIFHDDMKDLAPEISRYEDTKALHGGHDGLEVTKNILKMARYLLKHEG 175 >gi|315653747|ref|ZP_07906667.1| protein-(glutamine-N5) methyltransferase [Lactobacillus iners ATCC 55195] gi|315489109|gb|EFU78751.1| protein-(glutamine-N5) methyltransferase [Lactobacillus iners ATCC 55195] Length = 281 Score = 88.6 bits (218), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 77/258 (29%), Positives = 124/258 (48%), Gaps = 18/258 (6%) Query: 11 LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70 L L+ Q + D L Q + + + K S I+G F + + Sbjct: 29 LAERQNLTPSQYHLQLDQDLPKEQLTQIKKDLNKLHKGMSPQYIVGHAWFLGYSIDVHPG 88 Query: 71 TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV----- 125 PR ETE LV AL + +D ++LDLGTG+GA+ +AL K++ K + Sbjct: 89 VLIPRFETEELVTWALDYL------KDNSKVLDLGTGSGAITVALAKKAEC-KNINNIVY 141 Query: 126 -GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184 DI+ AL ++ N + +++ T ++D +E FD+I+SNPPYI++ D + Sbjct: 142 YASDITDSALRQSEENFLKFNLNDII-TRKADVLIGLEK-FDLIISNPPYIKNSEKDLMD 199 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 V +P +L G DGL YR V +HLNKDG +E G++QK + +F +++L Sbjct: 200 QNVIKNEPEEALFAGADGLDFYRRFVKQVPKHLNKDGHFFLEFGFSQKDLLAELF-AKEL 258 Query: 245 --FLVNAFKDYGGNDRVL 260 F + D G R++ Sbjct: 259 PEFTIEFKNDLAGKPRMV 276 >gi|253731045|ref|ZP_04865210.1| HemK family methyltransferase [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253725233|gb|EES93962.1| HemK family methyltransferase [Staphylococcus aureus subsp. aureus USA300_TCH959] Length = 278 Score = 88.6 bits (218), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 72/233 (30%), Positives = 114/233 (48%), Gaps = 26/233 (11%) Query: 41 AIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR 100 A+ R L E I I+G+ FY ++S+ PRPETE + L F L ++E D Sbjct: 59 ALQRMLLGEPIQYIVGFASFYGRTFDVNSNCLIPRPETE---EVMLHF-LQQLE--DDAT 112 Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 I+D+GTG+G + + L E P + DIS +A+ +A++NA + +F L D Sbjct: 113 IVDIGTGSGVLAITLKCEKPDLNVIATDISLEAMNMARNNAEKHQSQIQF--LTGDALKP 170 Query: 161 V--EGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217 + EG+ + ++SNPPYI+ + + V F+P +L G + Y +I D + + Sbjct: 171 LINEGIKLNGLISNPPYIDEKDMVTMSPTVTRFEPHQALFADNHGYAIYESIIDDLPHVM 230 Query: 218 NKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK--------DYGGNDRVLLF 262 K EIGYNQ E+ K ++N F D G+DR++ F Sbjct: 231 EKGSPVVFEIGYNQG-------EALKSIILNKFPDKKIDIIKDINGHDRIVSF 276 >gi|259501684|ref|ZP_05744586.1| protein-(glutamine-N5) methyltransferase [Lactobacillus iners DSM 13335] gi|259166969|gb|EEW51464.1| protein-(glutamine-N5) methyltransferase [Lactobacillus iners DSM 13335] Length = 281 Score = 88.6 bits (218), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 77/258 (29%), Positives = 124/258 (48%), Gaps = 18/258 (6%) Query: 11 LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70 L L+ Q + D L Q + + + K S I+G F + + Sbjct: 29 LAERQNLTPSQYHLQLDQDLPKEQLTQIKKDLNKLHKGMSPQYIVGHAWFLGYSIDVHPG 88 Query: 71 TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV----- 125 PR ETE LV AL + +D ++LDLGTG+GA+ +AL K++ K + Sbjct: 89 VLIPRFETEELVTWALDYL------KDNSKVLDLGTGSGAITVALAKKAEC-KNINNIVY 141 Query: 126 -GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184 DI+ AL ++ N + +++ T ++D +E FD+I+SNPPYI++ D + Sbjct: 142 YASDITDSALRQSEENFLKFNLNDII-TRKADVLIGLEK-FDLIISNPPYIKNSEKDLMD 199 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 V +P +L G DGL YR V +HLNKDG +E G++QK + +F +++L Sbjct: 200 QNVIKNEPEEALFAGADGLDFYRRFVKQVPKHLNKDGHFFLEFGFSQKDLLAELF-AKEL 258 Query: 245 --FLVNAFKDYGGNDRVL 260 F + D G R++ Sbjct: 259 PEFTIEFKNDLAGKPRMV 276 >gi|90021737|ref|YP_527564.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Saccharophagus degradans 2-40] gi|89951337|gb|ABD81352.1| modification methylase, HemK family [Saccharophagus degradans 2-40] Length = 300 Score = 88.6 bits (218), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 58/188 (30%), Positives = 100/188 (53%), Gaps = 11/188 (5%) Query: 44 RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103 R +H + + G F ++ ++ D PR L++ P +++ +ILD Sbjct: 79 RVQQHIPLPYLTGEAWFAGLKFHVTPDVLIPRSPIAELIEREFQ---PMLQQYPA-KILD 134 Query: 104 LGTGTGAVCLALLKESPFFKGVGVDIS---CKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 L TG+G + +A F+ VDIS AL++A+ N + + +R T++SD F Sbjct: 135 LCTGSGCIGIACAYA---FEEAMVDISDISTAALDVAQLNIANHTLQDRVSTVESDVFDG 191 Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220 + G +D+IVSNPPY+++ + + E + +PR++L+ G DGL R I ++HL +D Sbjct: 192 ITGQYDLIVSNPPYVDAQDMASIPAEYQ-VEPRMALESGDDGLDITRRILAKAAQHLTED 250 Query: 221 GLCSVEIG 228 GL VE+G Sbjct: 251 GLLVVEVG 258 >gi|154148971|ref|YP_001406204.1| bifunctional methyltransferase [Campylobacter hominis ATCC BAA-381] gi|153804980|gb|ABS51987.1| bifunctional methyltransferase [Campylobacter hominis ATCC BAA-381] Length = 262 Score = 88.6 bits (218), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 74/243 (30%), Positives = 123/243 (50%), Gaps = 17/243 (6%) Query: 17 LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRP 76 S +I++ D LD+ +F+ I + + + I +F+ + PR Sbjct: 30 FSDTDLILNLDKELDENSKFW--EFIEKFQNGKPLAYITNEVEFFGEIFFVDESVLIPRF 87 Query: 77 ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136 ETE+LV+ SL ++ +IL++GTG+G + + L K + + VDIS KAL+ Sbjct: 88 ETEILVNK----SLEILKNFKAPKILEIGTGSGIISIMLKKNIKDAEILAVDISKKALKT 143 Query: 137 AKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYI-ESVIVDCLGLEVRDFDPRIS 195 A NA +GV F SD F +VEG FD++VSNPPYI + +D L+ +P + Sbjct: 144 AIKNAKFHGVEIDFKI--SDLFENVEGNFDLVVSNPPYIAQDYPLDDYVLK----EPETA 197 Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGG 255 L GG +G + + +++ N+ + EIGY+QK ++++ + F +KD G Sbjct: 198 LIGGKNG---SEILINLINQSANRTKFLACEIGYDQK-EILKKELVKNGFKAQFYKDLAG 253 Query: 256 NDR 258 DR Sbjct: 254 FDR 256 >gi|116629882|ref|YP_815054.1| methylase of polypeptide chain release factor [Lactobacillus gasseri ATCC 33323] gi|282851602|ref|ZP_06260967.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Lactobacillus gasseri 224-1] gi|311110482|ref|ZP_07711879.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Lactobacillus gasseri MV-22] gi|116095464|gb|ABJ60616.1| Methylase of polypeptide chain release factor [Lactobacillus gasseri ATCC 33323] gi|282557570|gb|EFB63167.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Lactobacillus gasseri 224-1] gi|311065636|gb|EFQ45976.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Lactobacillus gasseri MV-22] Length = 280 Score = 88.6 bits (218), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 67/197 (34%), Positives = 104/197 (52%), Gaps = 14/197 (7%) Query: 50 SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109 S ILG+ FY ++ ++ PR ETE LV AL ++ EK ILDLGTG+G Sbjct: 67 SPQYILGYAWFYGYKILVNRGVLIPRFETEELVKWALE-NIKSGEK-----ILDLGTGSG 120 Query: 110 AVCLALLKESPFFKGVGV-----DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL 164 A+ +AL+K++ K + DI+ AL ++ N + + R T +++ +E Sbjct: 121 AIMVALVKQAQDRKIENLILYASDITDAALRESEENFLKYDLDVR--TRKANVLVGLEK- 177 Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224 FD I+SNPPYI++ D + V +P +L GG DGL YR A + HL G Sbjct: 178 FDTIISNPPYIKTSEKDLMDANVIKNEPDTALYGGEDGLDFYRKFAKQIRSHLYSHGQFF 237 Query: 225 VEIGYNQKVDVVRIFES 241 +E G+++K + +FE+ Sbjct: 238 LEFGFSEKDQLKDLFEA 254 >gi|265765180|ref|ZP_06093455.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacteroides sp. 2_1_16] gi|263254564|gb|EEZ25998.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacteroides sp. 2_1_16] Length = 278 Score = 88.6 bits (218), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 76/259 (29%), Positives = 118/259 (45%), Gaps = 16/259 (6%) Query: 12 CRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDT 71 C + G + + D L ++ L + + R K+E I I G FY ++ Sbjct: 30 CDLLGQDAIDYYLGKDITLSANEQCDLESIVERLKKNEPIQYIQGETCFYGSMFRVAPGV 89 Query: 72 FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131 PRPETE LVD + E R+LD+GTG+G + ++L K P D+S Sbjct: 90 LIPRPETEELVDLIVK------EAATGTRLLDIGTGSGCIAISLAKHIPQAVVTAWDVSE 143 Query: 132 KALEIAKSN--AVTNGVS-ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVR 188 +AL IA N + GV E+ D L ++ + +D+IVSNPPY+ + + V Sbjct: 144 EALAIAGENNRELKAGVHFEKMDVLSAEPVGDDQ--YDMIVSNPPYVTESEKNEMEPNVL 201 Query: 189 DFDPRISL---DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245 D++P ++L D D L YR IA + L G EI +V+++ + Sbjct: 202 DWEPGLALFVPDN--DPLRFYRRIASLGRKMLRLHGRLYFEINRAYGEEVIQMLHEQGYE 259 Query: 246 LVNAFKDYGGNDRVLLFCR 264 + KD GNDR++ R Sbjct: 260 ELRLIKDISGNDRIVTAKR 278 >gi|30248453|ref|NP_840523.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Nitrosomonas europaea ATCC 19718] gi|30138339|emb|CAD84347.1| adenine specific methylase, HemK family [Nitrosomonas europaea ATCC 19718] Length = 312 Score = 88.6 bits (218), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 57/150 (38%), Positives = 84/150 (56%), Gaps = 7/150 (4%) Query: 93 IEKRDVVRILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVSERF 150 ++ D+ LDL TG+G CLA+L F + VDIS AL++A N + R Sbjct: 140 MDPYDIGTALDLCTGSG--CLAILLAHAFEQAQIDAVDISSDALDVASINVRNYDLINRV 197 Query: 151 DTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209 +QSD F+ ++G +D+I+SNPPY+ + + L E +P ++L GG DGL R I Sbjct: 198 GLIQSDLFAELQGKRYDLIISNPPYVNAASMAMLPEEYH-HEPSVALAGGSDGLDIIRRI 256 Query: 210 ADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 + HL +DGL +EIG+NQ +V R F Sbjct: 257 FKEAAHHLTEDGLLIMEIGHNQ-AEVERAF 285 >gi|195385016|ref|XP_002051204.1| GJ14693 [Drosophila virilis] gi|194147661|gb|EDW63359.1| GJ14693 [Drosophila virilis] Length = 335 Score = 88.6 bits (218), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 69/236 (29%), Positives = 113/236 (47%), Gaps = 22/236 (9%) Query: 30 LDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFS 89 L + +RF L+H I+G DF ++ L + F PRPETE V Sbjct: 99 LANFERFLEARCARMPLQH-----IIGEWDFMDITLKTAPTVFIPRPETEEFV----RLV 149 Query: 90 LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 + + V +L++G G+GA+ L++L P + ++ S A +A NA G+ +R Sbjct: 150 IENYRQAKHVNMLEVGCGSGAMSLSVLHALPQVEATAIERSKVATVLAWENANLLGLQDR 209 Query: 150 FD----TLQSDWFSSVE---GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202 F T++ D + E +D+I+SNPPY+++ L EV ++ +LDGG DG Sbjct: 210 FKVHNHTMEEDNYMPTELQDKQYDLIISNPPYVKTEEFQFLHPEVVVYENLNALDGGSDG 269 Query: 203 LSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI-----FESRKLFLVNAFKDY 253 L R + D RHL G +E+G N+ +V+ ++ R F+ + F Y Sbjct: 270 LRVARLVFDLACRHLRPGGKLWLELG-NEHPPLVKTIMNLKYQGRLNFVGSYFDQY 324 >gi|238853675|ref|ZP_04644043.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Lactobacillus gasseri 202-4] gi|238833713|gb|EEQ25982.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Lactobacillus gasseri 202-4] Length = 280 Score = 88.6 bits (218), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 67/197 (34%), Positives = 104/197 (52%), Gaps = 14/197 (7%) Query: 50 SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109 S ILG+ FY ++ ++ PR ETE LV AL ++ EK ILDLGTG+G Sbjct: 67 SPQYILGYAWFYGYKILVNRGVLIPRFETEELVKLALE-NIKSGEK-----ILDLGTGSG 120 Query: 110 AVCLALLKESPFFKGVGV-----DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL 164 A+ +AL+K++ K + DI+ AL ++ N + + R T +++ +E Sbjct: 121 AIMVALVKQAQDRKIENLILYASDITDAALRESEENFLKYDLDVR--TRKANVLVGLEK- 177 Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224 FD I+SNPPYI++ D + V +P +L GG DGL YR A + HL G Sbjct: 178 FDTIISNPPYIKTSEKDLMDANVIKNEPDTALYGGEDGLDFYRKFAKQIRSHLYSHGQFF 237 Query: 225 VEIGYNQKVDVVRIFES 241 +E G+++K + +FE+ Sbjct: 238 LEFGFSEKDQLKDLFEA 254 >gi|146307761|ref|YP_001188226.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Pseudomonas mendocina ymp] gi|145575962|gb|ABP85494.1| [LSU ribosomal protein L3P]-glutamine N5-methyltransferase [Pseudomonas mendocina ymp] Length = 306 Score = 88.6 bits (218), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 66/215 (30%), Positives = 106/215 (49%), Gaps = 8/215 (3%) Query: 27 DSVLDDRQRFFLTNAIVRSLKHE-SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85 D L+D + L + R ++ +LG F + + PR L++ Sbjct: 60 DCRLEDDEHLHLQGLLKRRIEERVPTAYLLGEAWFCGLPFRVDERVLVPRSPIAELIERH 119 Query: 86 LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145 A LP+ + R+LDL TG+G + +A E P + V D+S +ALE+A N +G Sbjct: 120 FAPWLPQ----EPARVLDLCTGSGCIGIACAYEFPEAEVVLADLSFEALEVANQNIERHG 175 Query: 146 VSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204 + ER +Q D F+ + G FD+IVSNPPY+++ + E + +P + L G DGL Sbjct: 176 LEERVYCVQGDGFAGLPGQRFDLIVSNPPYVDAEDFADMPAEYQH-EPAMGLACGADGLD 234 Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 R + + HL + GL VE+G N +V V ++ Sbjct: 235 LVRRMLAEAADHLTERGLLIVEVG-NSQVHVEALY 268 >gi|168021379|ref|XP_001763219.1| predicted protein [Physcomitrella patens subsp. patens] gi|162685702|gb|EDQ72096.1| predicted protein [Physcomitrella patens subsp. patens] Length = 331 Score = 88.6 bits (218), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 61/187 (32%), Positives = 92/187 (49%), Gaps = 8/187 (4%) Query: 57 WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116 WRD L++ PRPETE ++D A A ++ + DLGTG+GA+ +A+ Sbjct: 110 WRDLV---LSVQEGVLIPRPETEQMIDLAEA-AITADNSLNNGLWADLGTGSGALAIAMA 165 Query: 117 KESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL---FDVIVSNP 172 + P V VD S A+ +A+ N + +R + + WF+ +E L I+SNP Sbjct: 166 RLLPPTGSVIAVDASPIAVAVARRNVEKYELKDRVNVVFGSWFTPLENLNGSLAGILSNP 225 Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232 PYI S + L EV +P+ +LDGG DG+S R I G S L G +E + Sbjct: 226 PYIPSENIAGLQAEVGKHEPQSALDGGEDGMSDLRKICQGSSFALRAGGFLVLETNGGNQ 285 Query: 233 VDVVRIF 239 + V + Sbjct: 286 AEAVSAY 292 >gi|302521936|ref|ZP_07274278.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptomyces sp. SPB78] gi|318060717|ref|ZP_07979440.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Streptomyces sp. SA3_actG] gi|318075508|ref|ZP_07982840.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Streptomyces sp. SA3_actF] gi|333024404|ref|ZP_08452468.1| putative methyltransferase [Streptomyces sp. Tu6071] gi|302430831|gb|EFL02647.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptomyces sp. SPB78] gi|332744256|gb|EGJ74697.1| putative methyltransferase [Streptomyces sp. Tu6071] Length = 281 Score = 88.6 bits (218), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 70/223 (31%), Positives = 104/223 (46%), Gaps = 17/223 (7%) Query: 26 PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85 PD+ D R++ T I R E + I G F + L + F PRPETE S Sbjct: 46 PDADFD--ARYWET--IARREAREPLQHITGRAYFRYLELQVGPGVFVPRPETE----SV 97 Query: 86 LAFSLPRIEKRDVVR--ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143 + +++ + DVV ++DL TG+GA+ LAL +E P V++S AL + N Sbjct: 98 VGWAIDAVRAMDVVEPLVVDLCTGSGAIALALAQEVPRSTVHAVELSEDALVWTRKNVEG 157 Query: 144 NGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200 + R D F+++ +G D+++SNPPYI + + E RD DP ++L G Sbjct: 158 S----RVHLHHGDAFAALPELDGQVDLVISNPPYIPLTEWEYVAPEARDHDPEMALFSGE 213 Query: 201 DGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 DGL R I R L G+ VE Q V +F + Sbjct: 214 DGLDTIRRIERTAHRLLRPGGVVVVEHADTQGGQVPWLFTEER 256 >gi|15608440|ref|NP_215816.1| hypothetical protein Rv1300 [Mycobacterium tuberculosis H37Rv] gi|148661088|ref|YP_001282611.1| hypothetical protein MRA_1308 [Mycobacterium tuberculosis H37Ra] gi|167969627|ref|ZP_02551904.1| HemK [Mycobacterium tuberculosis H37Ra] gi|306775472|ref|ZP_07413809.1| hypothetical protein hemK [Mycobacterium tuberculosis SUMu001] gi|306971581|ref|ZP_07484242.1| hypothetical protein hemK [Mycobacterium tuberculosis SUMu010] gi|1322424|emb|CAA97733.1| PROBABLE HEMK PROTEIN HOMOLOG HEMK [Mycobacterium tuberculosis H37Rv] gi|148505240|gb|ABQ73049.1| HemK [Mycobacterium tuberculosis H37Ra] gi|308216020|gb|EFO75419.1| hypothetical protein hemK [Mycobacterium tuberculosis SUMu001] gi|308358949|gb|EFP47800.1| hypothetical protein hemK [Mycobacterium tuberculosis SUMu010] Length = 325 Score = 88.6 bits (218), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 74/221 (33%), Positives = 103/221 (46%), Gaps = 13/221 (5%) Query: 50 SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109 + ++G F V L + F PRPETE ++ A A SLP R + I+D TG+G Sbjct: 88 PLQHLIGTVSFGPVVLHVGPGVFVPRPETEAILAWATAQSLP---ARPL--IVDACTGSG 142 Query: 110 AVCLALLKESPFF----KGVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSDWFSSVEGL 164 A+ +AL + + +G+D S AL+ A+ NA V R D ++G Sbjct: 143 ALAVALAQHRANLGLKARIIGIDDSDCALDYARRNAAGTPVELVRADVTTPRLLPELDGQ 202 Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224 D++VSNPPYI V L EV DP +L GG DG++ + R L GL + Sbjct: 203 VDLMVSNPPYIPDAAV--LEPEVAQHDPHHALFGGPDGMTVISAVVGLAGRWLRPGGLFA 260 Query: 225 VEIGYNQKVDVVRIFESRKLFL-VNAFKDYGGNDRVLLFCR 264 VE V + S KLF+ V A KD G R + R Sbjct: 261 VEHDDTTSSSTVDLVSSTKLFVDVQARKDLAGRPRFVTAMR 301 >gi|289550268|ref|YP_003471172.1| polypeptide chain release factors methylase [Staphylococcus lugdunensis HKU09-01] gi|289179800|gb|ADC87045.1| polypeptide chain release factors methylase [Staphylococcus lugdunensis HKU09-01] Length = 279 Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 65/226 (28%), Positives = 110/226 (48%), Gaps = 12/226 (5%) Query: 41 AIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR 100 A+ R L E I I+G++ FY ++ + PRPETE ++ L Sbjct: 59 AVQRMLLGEPIQYIVGFQSFYGYPFKVNENCLIPRPETEEVMLHFLNGC------HSQGS 112 Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV---TNGVSERFDTLQSDW 157 I+D+GTG+GA+ + + K +P K + D+ + L IA+ NA + + + D L+ Sbjct: 113 IVDVGTGSGAIAITIKKLNPQLKVIATDLYKETLTIAQENASYLDADIIFMQGDVLKPLI 172 Query: 158 FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217 +++ D ++SNPPYI + V ++P +L +G + Y I D + + L Sbjct: 173 QKNIK--VDGLISNPPYISEKETCQMTNTVLKYEPHHALFAENNGFAIYEAILDDLPKVL 230 Query: 218 NKDGLCSVEIGYNQKVDVVRIFESRKLFL-VNAFKDYGGNDRVLLF 262 N+D + EIGY Q + + ++ R L V KD G DR++ F Sbjct: 231 NEDAFVTFEIGYQQGLQLKQLVLQRYPKLDVKVTKDINGLDRIVSF 276 >gi|262201849|ref|YP_003273057.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Gordonia bronchialis DSM 43247] gi|262085196|gb|ACY21164.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Gordonia bronchialis DSM 43247] Length = 314 Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 70/239 (29%), Positives = 112/239 (46%), Gaps = 12/239 (5%) Query: 34 QRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRI 93 +R A+ R + I G F V L + F PRPETEL+V+ AL LP Sbjct: 64 RRAEFEAAVDRRAAGVPLQHITGRVGFGTVELAVGPGVFIPRPETELIVEWAL-RRLPSP 122 Query: 94 EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS-----E 148 ++R +RI+DL +G+GA+ LA+ P + V V++ AL + N G + Sbjct: 123 QRRAPLRIVDLCSGSGALALAIAHRLPAAEVVAVEVDDAALTWLRRNVERLGPAGRVHVH 182 Query: 149 RFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206 R D D S++ + D++VSNPPY+ + +G EV DP +++ GG DG+ Sbjct: 183 RADVTDHDAMSALFDDASVDLVVSNPPYVPTTA--TVGAEVA-HDPDLAVYGGPDGMQVI 239 Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL-VNAFKDYGGNDRVLLFCR 264 + G++R L G ++E VV+ +F + + +D G R + R Sbjct: 240 TPMIAGIARVLAPGGSVAIEHDDTTAGLVVQELRDAGVFADIESHRDLAGRPRFVTAVR 298 >gi|118619168|ref|YP_907500.1| modification methylase HemK [Mycobacterium ulcerans Agy99] gi|118571278|gb|ABL06029.1| modification methylase HemK [Mycobacterium ulcerans Agy99] Length = 282 Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 74/235 (31%), Positives = 106/235 (45%), Gaps = 9/235 (3%) Query: 26 PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85 PD LD + + + + ++G F V L + F PRPETE +++ A Sbjct: 45 PDDPLDSDALGQYQDMVTARSRRVPLQHLIGTVQFGPVELQVGPGVFVPRPETEAVLEWA 104 Query: 86 LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145 A L D V I+DL TG+GA+ +AL P + +GVD S ALE A N+V Sbjct: 105 GAQQL----SEDPV-IVDLCTGSGALAVALANRWPTARILGVDDSAAALEYAHRNSVGTK 159 Query: 146 VS-ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204 V R D ++G D++V+NPPYI V L EV DP +L GG +G++ Sbjct: 160 VELVRADVTTPGLMPELDGQVDLVVTNPPYIPDGAV--LEPEVAQHDPHRALFGGPNGMA 217 Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL-VNAFKDYGGNDR 258 + R L G +VE V+ ES +F + A +D G R Sbjct: 218 VIPHVVRLAGRWLRPGGRFAVEHDDTTARQTVKCIESAGVFEDIVARQDLAGRPR 272 >gi|330466247|ref|YP_004403990.1| modification methylase, HemK family protein [Verrucosispora maris AB-18-032] gi|328809218|gb|AEB43390.1| modification methylase, HemK family protein [Verrucosispora maris AB-18-032] Length = 272 Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 67/215 (31%), Positives = 107/215 (49%), Gaps = 18/215 (8%) Query: 44 RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103 R + E + +LGW +F R+T+ F PR T LV +A A + P R+++ Sbjct: 47 RRVAGEPLEYLLGWAEFCGERITVVPGVFVPRARTAALVAAAEAVTGP------AARVVE 100 Query: 104 LGTGTGAVCLALLKE--SPFFKGVGVDISCKALEIAKSN----AVTNGVSERFDTLQSDW 157 L G+GA+ AL + +P VD+ A+ A+ N AV + FD L + W Sbjct: 101 LCCGSGALTRALARRLHAPRLLA-AVDVDPAAVACARGNLAELAVPVYAGDLFDALPATW 159 Query: 158 FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217 G D++V+N PY+ + +D L E R ++ ++LDGG DGL+ R +A +R L Sbjct: 160 ----RGTLDLVVANAPYVPTAALDLLPAESRRYEALVALDGGPDGLAVLRRLAADATRWL 215 Query: 218 NKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKD 252 G VE+G +Q VD++ + L + F+D Sbjct: 216 APGGHLVVEVGQSQ-VDLLATVLAEAGLLPSTFRD 249 >gi|333027514|ref|ZP_08455578.1| putative methytransferase [Streptomyces sp. Tu6071] gi|332747366|gb|EGJ77807.1| putative methytransferase [Streptomyces sp. Tu6071] Length = 287 Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 64/214 (29%), Positives = 98/214 (45%), Gaps = 5/214 (2%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101 + R + E + ++G F+ +R+ + F PR +E LV A +L + V + Sbjct: 38 VARRVAGEPLEHVVGHAVFHGLRIAVGPGVFVPRRRSEFLV----ARALDGVRAEGAVTL 93 Query: 102 LDLGTGTGAVCLALLKE-SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 LDL G+GA+ LAL P D+ AL A+ N G L + ++ Sbjct: 94 LDLCCGSGALGLALRTALGPRATLHAADVDPGALRWARRNLAPVGAHVHEGDLYAPLPAA 153 Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220 + G DV+ +N PY+ S V L E R +P ++LDGG DGL R +A+ + L Sbjct: 154 LRGRVDVLTANVPYVPSEEVRLLPAEARAHEPLVALDGGRDGLDLVRRVAEEAATWLAPG 213 Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYG 254 G VE G Q +V IF + L A ++ G Sbjct: 214 GRLLVESGERQAPEVAGIFTAAALHAEIAHEEEG 247 >gi|222099157|ref|YP_002533725.1| HemK protein [Thermotoga neapolitana DSM 4359] gi|221571547|gb|ACM22359.1| HemK protein [Thermotoga neapolitana DSM 4359] Length = 255 Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 75/263 (28%), Positives = 127/263 (48%), Gaps = 34/263 (12%) Query: 12 CRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDT 71 +V G+ V+ D ++ ++++ + + + +H ILG ++F + + Sbjct: 14 AKVLGVRKEDVVTK-DIIVSEKEKSIIKELVEKRANGYPLHYILGEKEFMGLSFFVEEGV 72 Query: 72 FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV---GVD 128 F PRPETE LV+ AL I++ + + D+GTG+GA+ +++ K F G D Sbjct: 73 FIPRPETEELVEMALDL----IKRYGLRVVADVGTGSGAIGVSIAK----FSGAIVFATD 124 Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF---DVIVSNPPYIE---SVIVDC 182 IS KA+E++ NA +GV +RF + + E + ++I+SNPPY++ + D Sbjct: 125 ISEKAVEVSLKNAKRHGVLDRFVVKRGRFLEPFEKDYEKMEMILSNPPYVKMSARLPQDV 184 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 L F+P +L G DGL YR R+ + + +EIG +Q + E + Sbjct: 185 L------FEPSEALFAGEDGLDFYREF---FRRYSTEGKIVLMEIGEDQ------VEELK 229 Query: 243 KLFLVNAF-KDYGGNDRVLLFCR 264 K+ AF KD G R L R Sbjct: 230 KIVPGAAFLKDTSGRYRFLHINR 252 >gi|56479090|ref|YP_160679.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Aromatoleum aromaticum EbN1] gi|56315133|emb|CAI09778.1| Adenine specific methylase, HemK family [Aromatoleum aromaticum EbN1] Length = 311 Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 56/166 (33%), Positives = 92/166 (55%), Gaps = 6/166 (3%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 V LDL TG+G + + + P + VG D+S +AL++A++N + +R + L+SD Sbjct: 144 VTSALDLCTGSGCLAILMAHAFPNAQIVGADLSDEALQVARANVSDYDLDDRVELLKSDV 203 Query: 158 FSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216 F+ + G FD+I+SNPPY+ + + L E +PR++L G DGL R + G H Sbjct: 204 FAGLAGRRFDLIISNPPYVTADAMATLPPEYL-HEPRMALAAGEDGLDIVRRLLAGAKAH 262 Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262 LN G+ +VE+G+N+ + V F ++A GG+D V + Sbjct: 263 LNPGGMLAVEVGHNRYL-VEEAFPDLSPVWLSA---QGGDDMVFVL 304 >gi|241855543|ref|XP_002416030.1| n6-DNA-methyltransferase, putative [Ixodes scapularis] gi|215510244|gb|EEC19697.1| n6-DNA-methyltransferase, putative [Ixodes scapularis] Length = 222 Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 72/214 (33%), Positives = 103/214 (48%), Gaps = 22/214 (10%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110 + ILG DF+N+ L + F PRPETE LVD L+ L R K V LD+G GTGA Sbjct: 8 VQYILGEWDFHNITLKMQPPIFIPRPETENLVDIVLSH-LKRTPKSSTV--LDIGCGTGA 64 Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV------------SERFDTLQSDWF 158 +CLA L + GVD + KA++++K NA + S DT S Sbjct: 65 ICLA-LGNAAQIHCTGVDKNPKAVKLSKENATNLNLAHCATFHEAEISSHGIDTAYSPLL 123 Query: 159 SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 + V +DVIVSNPPYI + L EV ++ +L G GL + I +L Sbjct: 124 NQV---YDVIVSNPPYISTEEAKDLEPEVLRYEDHGALFAGPRGLDMVQNILRYSRTNLR 180 Query: 219 KDGLCSVEIGYNQKV---DVVRIFESRKLFLVNA 249 G +E+G + +++R E +L ++A Sbjct: 181 VGGHLFLEVGLSHPPLIRNILRTPEYNQLLRLHA 214 >gi|294671088|ref|ZP_06735943.1| hypothetical protein NEIELOOT_02796 [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291307196|gb|EFE48439.1| hypothetical protein NEIELOOT_02796 [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 299 Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 54/144 (37%), Positives = 79/144 (54%), Gaps = 2/144 (1%) Query: 91 PRIEKRDVVRI-LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 P IE ++V LDL TG+G + + + P VDIS ALE+A N G+ +R Sbjct: 123 PWIEYDELVHTALDLCTGSGCLAIQMAHHYPAADVDAVDISLDALEVAAVNVEDYGLEDR 182 Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209 + + +D F +EG +D+IVSNPPY+++ V L E +P +L G DGL R I Sbjct: 183 INLIHTDLFEGLEGTYDLIVSNPPYVDAESVAELPPEYL-HEPEEALGSGEDGLDATRQI 241 Query: 210 ADGVSRHLNKDGLCSVEIGYNQKV 233 ++ LN G+ VEIG+N+ V Sbjct: 242 ILQAAKFLNPRGVLLVEIGHNRDV 265 >gi|326332908|ref|ZP_08199165.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Nocardioidaceae bacterium Broad-1] gi|325949266|gb|EGD41349.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Nocardioidaceae bacterium Broad-1] Length = 285 Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 67/216 (31%), Positives = 98/216 (45%), Gaps = 18/216 (8%) Query: 29 VLD-DRQRFFLTNAIV------------RSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75 VLD DR R FL + + R + E + + G F +V L + F PR Sbjct: 34 VLDTDRNRRFLVDDVAEHEEKAYADLLARRARREPLQHLTGVAYFRHVELAVGPGVFVPR 93 Query: 76 PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135 PETELL +++ R D ++DL TG+GA+ ++ E P + V++S A Sbjct: 94 PETELLA----GWAIDRATAIDTPVVVDLCTGSGAIAKSIADEVPGAEVHAVELSEDAYP 149 Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195 A N GV R + +D F+ + G DV+V NPPYI + + E RD DP ++ Sbjct: 150 WAVRNLTGTGVDLRQGDM-ADAFADLHGGVDVLVCNPPYIPLEAWESVAREARDHDPDLA 208 Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231 L G DGL R + + L G+ E Q Sbjct: 209 LFSGQDGLDAIRVLERRAAELLRPGGVVGFEHADEQ 244 >gi|295425485|ref|ZP_06818178.1| protein-(glutamine-N5) methyltransferase [Lactobacillus amylolyticus DSM 11664] gi|295064824|gb|EFG55739.1| protein-(glutamine-N5) methyltransferase [Lactobacillus amylolyticus DSM 11664] Length = 280 Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 79/253 (31%), Positives = 120/253 (47%), Gaps = 19/253 (7%) Query: 16 GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75 GL+ + + D L D Q I + K S ILG+ F ++ + PR Sbjct: 33 GLTPSEFELKQDLELSDAQVKQANKDIKKLAKGISPQYILGYAWFLGYKIMVQRGVLIPR 92 Query: 76 PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV-----DIS 130 ETE LV+ ++L + D ++LDLGTG+G + +AL KE+ + D++ Sbjct: 93 FETEELVE----WALKSLHNGD--QVLDLGTGSGCIAIALAKEAEKKHIADLHLTISDVT 146 Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL--FDVIVSNPPYIESVIVDCLGLEVR 188 AL IA+ N +T V D L + + GL FD I+SNPPYI+ V + V Sbjct: 147 DTALRIAEENLLTYSV----DALVRK-ANCLIGLAKFDKIISNPPYIKKSEVKDMDQNVL 201 Query: 189 DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLV 247 +P +L GG DGL YR A V HLN G +E G++++ + +F + F + Sbjct: 202 QNEPDTALFGGDDGLDFYRKFAKEVRDHLNSHGEFFMEFGFSEEQQLRELFSAELPDFEI 261 Query: 248 NAFKDYGGNDRVL 260 KD G R++ Sbjct: 262 EFRKDMAGKPRMI 274 >gi|271963195|ref|YP_003337391.1| modification methylase,HemK family [Streptosporangium roseum DSM 43021] gi|270506370|gb|ACZ84648.1| modification methylase,HemK family [Streptosporangium roseum DSM 43021] Length = 284 Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 63/205 (30%), Positives = 96/205 (46%), Gaps = 10/205 (4%) Query: 40 NAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV 99 + R E + I G F + L + F PRPETE++ +++ R+ + DV Sbjct: 56 EGVARREAREPLQHITGRAYFRYLSLEVGPGVFVPRPETEVVA----GWAIERLREMDVA 111 Query: 100 R--ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ--S 155 ++DLGTG+GA+ L++ +E V++ A AK N + +G + + Sbjct: 112 SPVVVDLGTGSGAIALSIAQEIALATVHAVEVDPDAYRWAKRNILEHGQGRVHLHPEDLA 171 Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG-GIDGLSHYRTIADGVS 214 D S + G D+++SNPPYI + EVRD+DP +L G G DGL R + Sbjct: 172 DALSELNGQVDLVISNPPYIPPGAI-PRDPEVRDYDPHRALYGSGSDGLDEVRAVERTAR 230 Query: 215 RHLNKDGLCSVEIGYNQKVDVVRIF 239 R L G +VE Q V IF Sbjct: 231 RLLRPGGFVAVEHADEQGTPVYLIF 255 >gi|15840750|ref|NP_335787.1| N-methylase PapM [Mycobacterium tuberculosis CDC1551] gi|13880942|gb|AAK45601.1| N-methylase PapM [Mycobacterium tuberculosis CDC1551] gi|323720257|gb|EGB29356.1| hypothetical protein TMMG_01996 [Mycobacterium tuberculosis CDC1551A] Length = 304 Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 74/221 (33%), Positives = 103/221 (46%), Gaps = 13/221 (5%) Query: 50 SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109 + ++G F V L + F PRPETE ++ A A SLP R + I+D TG+G Sbjct: 67 PLQHLIGTVSFGPVVLHVGPGVFVPRPETEAILAWATAQSLP---ARPL--IVDACTGSG 121 Query: 110 AVCLALLKESPFF----KGVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSDWFSSVEGL 164 A+ +AL + + +G+D S AL+ A+ NA V R D ++G Sbjct: 122 ALAVALAQHRANLGLKARIIGIDDSDCALDYARRNAAGTPVELVRADVTTPCLLPELDGQ 181 Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224 D++VSNPPYI V L EV DP +L GG DG++ + R L GL + Sbjct: 182 VDLMVSNPPYIPDAAV--LEPEVAQHDPHHALFGGPDGMTVISAVVGLAGRWLRPGGLFA 239 Query: 225 VEIGYNQKVDVVRIFESRKLFL-VNAFKDYGGNDRVLLFCR 264 VE V + S KLF+ V A KD G R + R Sbjct: 240 VEHDDTTSSSTVDLVSSTKLFVDVQARKDLAGRPRFVTAMR 280 >gi|121637229|ref|YP_977452.1| putative hemk protein homolog hemK [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224989704|ref|YP_002644391.1| putative HemK protein homolog [Mycobacterium bovis BCG str. Tokyo 172] gi|121492876|emb|CAL71347.1| Probable hemk protein homolog hemK [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224772817|dbj|BAH25623.1| putative HemK protein homolog [Mycobacterium bovis BCG str. Tokyo 172] Length = 325 Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 74/221 (33%), Positives = 103/221 (46%), Gaps = 13/221 (5%) Query: 50 SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109 + ++G F V L + F PRPETE ++ A A SLP R + I+D TG+G Sbjct: 88 PLQHLIGTVSFGPVVLHVGPGVFVPRPETEAILGWATAQSLP---ARPL--IVDACTGSG 142 Query: 110 AVCLALLKESPFF----KGVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSDWFSSVEGL 164 A+ +AL + + +G+D S AL+ A+ NA V R D ++G Sbjct: 143 ALAVALAQHRANLGLKARIIGIDDSDCALDYARRNAAGTPVELVRADVTTPCLLPELDGQ 202 Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224 D++VSNPPYI V L EV DP +L GG DG++ + R L GL + Sbjct: 203 VDLMVSNPPYIPDAAV--LEPEVAQHDPHHALFGGPDGMTVISAVVGLAGRWLRPGGLFA 260 Query: 225 VEIGYNQKVDVVRIFESRKLFL-VNAFKDYGGNDRVLLFCR 264 VE V + S KLF+ V A KD G R + R Sbjct: 261 VEHDDTTSSSTVDLVSSTKLFVDVQARKDLAGRPRFVTAMR 301 >gi|302339535|ref|YP_003804741.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Spirochaeta smaragdinae DSM 11293] gi|301636720|gb|ADK82147.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Spirochaeta smaragdinae DSM 11293] Length = 309 Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 77/269 (28%), Positives = 126/269 (46%), Gaps = 20/269 (7%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L G+ V V L +++ I + L + + G R+F+ + Sbjct: 36 DASLLLAHAAGIDRTTVFVRLPDRLSEKEANRFRTLIHKRLTGTPVSYLTGRREFWGLDF 95 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDV--------VRILDLGTGTGAVCLALLK 117 +++ PRP+TE LV++AL +++ + +RILDL G+G + +AL Sbjct: 96 LVNNAVLIPRPDTETLVEAALEAIGAGMQEAEPGKGMRGGGLRILDLCCGSGCIGIALAS 155 Query: 118 ESPFFKGVGVDISCKALEIAKSN-AVTNGVSERFDTLQSDWFSSVEGL--FDVIVSNPPY 174 E P + V DIS A++ A N V + ++SD F + + FD+IV+NPPY Sbjct: 156 ELPEAEVVLSDISSAAVDTALRNRQRLLPVDQDIVVMRSDLFGGLFAMAPFDLIVTNPPY 215 Query: 175 I---ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH-LNKDGLCSVEIGYN 230 + E+ + G E +P +L GG +GLS R I SRH L +G +E + Sbjct: 216 LTDDEAEAMASAGWE----EPDGALRGGKEGLSLIRKIIP-ASRHVLRSEGYLFIESAPS 270 Query: 231 QKVDVVRIFESRKLFLVNAFKDYGGNDRV 259 Q ++ R+ + V+ KD G DRV Sbjct: 271 QSGEISRMLQEEGFLKVSVKKDLAGRDRV 299 >gi|261368037|ref|ZP_05980920.1| protein-(glutamine-N5) methyltransferase [Subdoligranulum variabile DSM 15176] gi|282570025|gb|EFB75560.1| protein-(glutamine-N5) methyltransferase [Subdoligranulum variabile DSM 15176] Length = 276 Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 65/224 (29%), Positives = 104/224 (46%), Gaps = 13/224 (5%) Query: 43 VRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRIL 102 R E + +LG DF + L + PR ++E++ ++A+ + +L Sbjct: 55 TRRAAREPLQYLLGEWDFLDFTLKVGPGVLCPRADSEVVCETAIEL----LRNVPHPTVL 110 Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162 DL GTG + L + + P + V+ S A ++N + GV +T+++D FS Sbjct: 111 DLCAGTGCLGLGVARAYPDARVTCVEKSGDAWPYLQANTMDTGV----ETVRADVFSWYR 166 Query: 163 GL----FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 L D+I+SNPPY+ + + L E +P ++LDGG DGL YR + L Sbjct: 167 TLAPESVDLILSNPPYLTAGEMRALMPET-SHEPAMALDGGTDGLDFYRLLCARYKAALR 225 Query: 219 KDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262 G +EIG Q V+ + KDYGGNDRV++ Sbjct: 226 PGGWLVLEIGCAQAAQVLALGGQYGWQNGRCRKDYGGNDRVVVL 269 >gi|215430187|ref|ZP_03428106.1| hypothetical protein MtubE_05798 [Mycobacterium tuberculosis EAS054] Length = 289 Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 74/221 (33%), Positives = 103/221 (46%), Gaps = 13/221 (5%) Query: 50 SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109 + ++G F V L + F PRPETE ++ A A SLP R + I+D TG+G Sbjct: 67 PLQHLIGTVSFGPVVLHVGPGVFVPRPETEAILAWATAQSLP---ARPL--IVDACTGSG 121 Query: 110 AVCLALLKESPFF----KGVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSDWFSSVEGL 164 A+ +AL + + +G+D S AL+ A+ NA V R D ++G Sbjct: 122 ALAVALAQHRANLGLKARIIGIDDSDCALDYARRNAAGTPVELVRADVTTPCLLPELDGQ 181 Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224 D++VSNPPYI V L EV DP +L GG DG++ + R L GL + Sbjct: 182 VDLMVSNPPYIPDAAV--LEPEVAQHDPHHALFGGPDGMTVISAVVGLAGRWLRPGGLFA 239 Query: 225 VEIGYNQKVDVVRIFESRKLFL-VNAFKDYGGNDRVLLFCR 264 VE V + S KLF+ V A KD G R + R Sbjct: 240 VEHDDTTSSSTVDLVSSTKLFVDVQARKDLAGRPRFVTAMR 280 >gi|224825464|ref|ZP_03698569.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Lutiella nitroferrum 2002] gi|224602385|gb|EEG08563.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Lutiella nitroferrum 2002] Length = 300 Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 53/144 (36%), Positives = 78/144 (54%), Gaps = 2/144 (1%) Query: 91 PRIEKRDVV-RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 P IE ++V R LDL TG+G + + + P + VDIS ALE+A N G+ +R Sbjct: 123 PWIEHPELVHRALDLCTGSGCLAIQMAHHYPDAQIDAVDISLDALEVASINVQRYGLEDR 182 Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209 + +D F +E +D+I+SNPPY++ VD L E +P ++L G DGL R I Sbjct: 183 IQLVHTDLFQGLEEKYDLIISNPPYVDEESVDDLPAEYL-HEPELALGSGRDGLDATREI 241 Query: 210 ADGVSRHLNKDGLCSVEIGYNQKV 233 L + G+ VEIG+N+ V Sbjct: 242 LRRAPEFLTEHGVLLVEIGHNRDV 265 >gi|15828577|ref|NP_325937.1| protoporphirogen oxidase HEMK [Mycoplasma pulmonis UAB CTIP] gi|14089519|emb|CAC13279.1| PROTOPORPHIROGEN OXIDASE HEMK [Mycoplasma pulmonis] Length = 230 Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 62/210 (29%), Positives = 107/210 (50%), Gaps = 21/210 (10%) Query: 27 DSVLDDRQRFFLTNAIVRS-----LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELL 81 D ++ +++R+ L N I + K+ + +I+G+ + NV++ + PR ETE L Sbjct: 5 DDLILEKRRYNLNNKISQKEKRLLKKNMPVQKIIGYIEMANVKIDICHKVLIPRYETEEL 64 Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV---DISCKALEIAK 138 + F +D +++LDL G+G + +AL K K + + DIS +A++ + Sbjct: 65 IFLVKDFL------KDDMKVLDLCAGSGFIGIALSK----MKKIDLTLSDISLEAIKQIE 114 Query: 139 SNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG 198 N N V + + +QSD F +++G FD+IVSNPPY+ + V+ F+P +L Sbjct: 115 KNVKINNV-KNYKIIQSDLFENIQGDFDIIVSNPPYLSY--EQKIDKSVKFFEPLKALYA 171 Query: 199 GIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228 +G Y I + S L KDG+ EI Sbjct: 172 PKNGWYFYEKIIEKASSFLKKDGMLFFEIN 201 >gi|269794321|ref|YP_003313776.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Sanguibacter keddieii DSM 10542] gi|269096506|gb|ACZ20942.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Sanguibacter keddieii DSM 10542] Length = 312 Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 68/224 (30%), Positives = 111/224 (49%), Gaps = 18/224 (8%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110 + + G F +V L + F PRPETE++ A+ +L + +R V ++DL TG+GA Sbjct: 86 LQHLTGTAPFRHVELDVGPGVFVPRPETEVVAQVAVDEALRVVAERGRVVVVDLCTGSGA 145 Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD---WFSSVEGLFDV 167 + +A+ +E P + V++ A A+ N + ++ R ++ D ++++GL DV Sbjct: 146 IAVAIAQEVPEAEVHAVELDAAAHAWARRN--VDRIAPRVTLVRGDARTALTALDGLCDV 203 Query: 168 IVSNPPYIESVIVDCLGLEVRDFDPRISLDG-GIDGLSHYRTIADGVSRHLNKDGLCSVE 226 +VSNPPY+ + V EV + DP ++L G G DGL R + SR L + GL +E Sbjct: 204 VVSNPPYVPTGAVPK-DREVAEHDPAVALYGLGPDGLEVPRGVTRAASRLLVRGGLYVME 262 Query: 227 ------IGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 G Q VD FE + D G R+++ R Sbjct: 263 HAEVQDAGARQMVDDTGDFEPAR-----TLPDLTGRPRMVVARR 301 >gi|260642491|ref|ZP_05859415.1| protein-(glutamine-N5) methyltransferase [Bacteroides finegoldii DSM 17565] gi|260621883|gb|EEX44754.1| protein-(glutamine-N5) methyltransferase [Bacteroides finegoldii DSM 17565] Length = 247 Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 76/255 (29%), Positives = 114/255 (44%), Gaps = 12/255 (4%) Query: 14 VTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFE 73 + G + + D +L + + L N I R K+E I I G+ F + ++ Sbjct: 1 MLGFDPLDIYLGKDMILSECKERELENIIFRLQKNEPIQYIRGFAVFGGRKFKVAPGVLI 60 Query: 74 PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133 PRPET LVD + E +LD+GTG+G + ++L K P DIS +A Sbjct: 61 PRPETAELVDWVVN------ENPGAHHLLDIGTGSGCIAISLDKRLPDADVEAWDISEEA 114 Query: 134 LEIAKSNAV---TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDF 190 L IA++N + + + D L DW S FDVIVSNPPY+ D + V D+ Sbjct: 115 LAIARTNNEELESRVLFRQRDVLSDDWEKSPS--FDVIVSNPPYVTEAEKDEMEANVLDW 172 Query: 191 DPRISL-DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249 +P ++L D L YR IA L +G EI ++ + E + + Sbjct: 173 EPALALFVPDDDPLRFYRRIATLGRELLLPEGKLYFEINRAFGREIAYMLEMNQYRDIRV 232 Query: 250 FKDYGGNDRVLLFCR 264 KD G DR++ R Sbjct: 233 IKDIFGKDRIVTANR 247 >gi|281411709|ref|YP_003345788.1| modification methylase, HemK family [Thermotoga naphthophila RKU-10] gi|281372812|gb|ADA66374.1| modification methylase, HemK family [Thermotoga naphthophila RKU-10] Length = 282 Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 75/263 (28%), Positives = 127/263 (48%), Gaps = 34/263 (12%) Query: 12 CRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDT 71 +V G+ V+ D ++ ++++ + + + +H ILG ++F + + Sbjct: 41 AKVLGVRKEDVVTK-DIIVSEKEKSIIKELVEKRANGYPLHYILGEKEFMGLSFFVEEGV 99 Query: 72 FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV---GVD 128 F PRPETE LV+ AL I++ + + D+GTG+GA+ +++ K F G D Sbjct: 100 FIPRPETEELVEMALDL----IKRYGLRVVADVGTGSGAIGVSIAK----FSGAIVFATD 151 Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF---DVIVSNPPYIE---SVIVDC 182 IS KA+E++ NA +GV +RF + + E + ++I+SNPPY++ + D Sbjct: 152 ISEKAVEVSLKNAKRHGVLDRFVVKRGRFLEPFEKDYEKIEMILSNPPYVKMSARLPQDV 211 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 L F+P +L G DGL YR R+ + + +EIG +Q + E + Sbjct: 212 L------FEPSEALFAGEDGLDFYREF---FRRYSTEGKIVLMEIGEDQ------VEELK 256 Query: 243 KLFLVNAF-KDYGGNDRVLLFCR 264 K+ AF KD G R L R Sbjct: 257 KIVPGAAFLKDTSGRYRFLHINR 279 >gi|289753377|ref|ZP_06512755.1| hypothetical protein hemK [Mycobacterium tuberculosis EAS054] gi|289693964|gb|EFD61393.1| hypothetical protein hemK [Mycobacterium tuberculosis EAS054] Length = 310 Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 74/221 (33%), Positives = 103/221 (46%), Gaps = 13/221 (5%) Query: 50 SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109 + ++G F V L + F PRPETE ++ A A SLP R + I+D TG+G Sbjct: 88 PLQHLIGTVSFGPVVLHVGPGVFVPRPETEAILAWATAQSLP---ARPL--IVDACTGSG 142 Query: 110 AVCLALLKESPFF----KGVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSDWFSSVEGL 164 A+ +AL + + +G+D S AL+ A+ NA V R D ++G Sbjct: 143 ALAVALAQHRANLGLKARIIGIDDSDCALDYARRNAAGTPVELVRADVTTPCLLPELDGQ 202 Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224 D++VSNPPYI V L EV DP +L GG DG++ + R L GL + Sbjct: 203 VDLMVSNPPYIPDAAV--LEPEVAQHDPHHALFGGPDGMTVISAVVGLAGRWLRPGGLFA 260 Query: 225 VEIGYNQKVDVVRIFESRKLFL-VNAFKDYGGNDRVLLFCR 264 VE V + S KLF+ V A KD G R + R Sbjct: 261 VEHDDTTSSSTVDLVSSTKLFVDVQARKDLAGRPRFVTAMR 301 >gi|148543688|ref|YP_001271058.1| HemK family modification methylase [Lactobacillus reuteri DSM 20016] gi|184153098|ref|YP_001841439.1| putative protoporphyrinogen oxidase [Lactobacillus reuteri JCM 1112] gi|227363333|ref|ZP_03847462.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Lactobacillus reuteri MM2-3] gi|325682059|ref|ZP_08161577.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Lactobacillus reuteri MM4-1A] gi|148530722|gb|ABQ82721.1| modification methylase, HemK family [Lactobacillus reuteri DSM 20016] gi|183224442|dbj|BAG24959.1| putative protoporphyrinogen oxidase [Lactobacillus reuteri JCM 1112] gi|227071640|gb|EEI09934.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Lactobacillus reuteri MM2-3] gi|324978703|gb|EGC15652.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Lactobacillus reuteri MM4-1A] Length = 288 Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 57/205 (27%), Positives = 95/205 (46%), Gaps = 7/205 (3%) Query: 37 FLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR 96 + +AI R L HE I+G FY ++ + P ET L+D L R Sbjct: 60 WWKDAITRLLNHEPAQYIVGQAPFYGRTFKVNKNVLIPEAETAELIDWVLQEMPSR---- 115 Query: 97 DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 +++LDLGTG+G + + L E P + DIS AL +A+ N + ++SD Sbjct: 116 -PLKVLDLGTGSGVIGITLALERPNWHVSLSDISPAALAVAQENMAKFNL--ELPLIKSD 172 Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216 F +++ +D+IV+NPPYI+ + V + +P ++L GL Y + ++ Sbjct: 173 LFENIDQQYDLIVTNPPYIDPDDTGEIDQAVLENEPALALFANERGLGFYHRLFKQAGQY 232 Query: 217 LNKDGLCSVEIGYNQKVDVVRIFES 241 L G E GY+Q+ + + Sbjct: 233 LTTTGQIFGETGYDQEESIQELLHQ 257 >gi|161507267|ref|YP_001577221.1| protoporphyrinogen oxidase [Lactobacillus helveticus DPC 4571] gi|160348256|gb|ABX26930.1| Protoporphyrinogen oxidase [Lactobacillus helveticus DPC 4571] Length = 280 Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 76/258 (29%), Positives = 127/258 (49%), Gaps = 19/258 (7%) Query: 11 LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70 L L+ + + D VL D Q I + K S ILG+ F+ ++ + Sbjct: 28 LAERLNLTPSEFELKQDMVLSDDQLKQANKDIKKLAKGVSPQYILGYAWFFGYKIMVQRG 87 Query: 71 TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV----- 125 PR ETE LV+ ++L ++ D ++LDLGTG+G + +AL KE+ KG+ Sbjct: 88 VLIPRFETEELVE----WTLKSLKSGD--KVLDLGTGSGCITVALAKEAEK-KGIKDLTL 140 Query: 126 -GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184 DI+ AL ++ N +T + T +++ +E FD I+SNPPYI++ + Sbjct: 141 YASDITDAALRTSEENFLTYDLD--VVTRKANVLIGLEK-FDKIISNPPYIKTTEKKEMD 197 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 V +P+ +L G DGL Y+ A V HLN G +E G++++ + +F +++L Sbjct: 198 ANVLQNEPKEALFAGNDGLDFYKKFAKQVRDHLNSHGEFFLEFGFSEEDQLKELF-AKEL 256 Query: 245 --FLVNAFKDYGGNDRVL 260 F + KD G R++ Sbjct: 257 PDFDIEFRKDMAGKPRMV 274 >gi|237719658|ref|ZP_04550139.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] gi|229450927|gb|EEO56718.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] Length = 232 Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 75/231 (32%), Positives = 104/231 (45%), Gaps = 12/231 (5%) Query: 38 LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97 L N I R K+E I I G +F ++S PRPET LV+ + E + Sbjct: 10 LENIIFRLQKNEPIQYIRGIAEFCGRNFKVASSVLIPRPETAELVELIVE------ENPN 63 Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQ 154 R+LD+GTG+G + ++L K+ P + DIS +AL IA+ N RF D L Sbjct: 64 ARRLLDIGTGSGCIAISLDKKLPDAEVEAWDISEEALAIARKNNDALEARVRFLQRDVLA 123 Query: 155 SDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL-DGGIDGLSHYRTIADGV 213 DW FDVIVSNPPY+ + + V D++P ++L D L Y IA Sbjct: 124 DDWEKIPS--FDVIVSNPPYVTETEKNEMDANVLDWEPGLALFVPDEDPLRFYNRIARLG 181 Query: 214 SRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 S L G EI + I E + V +D G DR++ R Sbjct: 182 SELLLPGGKLYFEINQAYGRETAHILEMNQYRDVRVIRDIFGKDRIVTANR 232 >gi|31792493|ref|NP_854986.1| hypothetical protein Mb1332 [Mycobacterium bovis AF2122/97] gi|148822518|ref|YP_001287272.1| hypothetical protein TBFG_11327 [Mycobacterium tuberculosis F11] gi|215403142|ref|ZP_03415323.1| hypothetical protein Mtub0_05481 [Mycobacterium tuberculosis 02_1987] gi|215410939|ref|ZP_03419747.1| hypothetical protein Mtub9_06320 [Mycobacterium tuberculosis 94_M4241A] gi|215426622|ref|ZP_03424541.1| hypothetical protein MtubT9_09609 [Mycobacterium tuberculosis T92] gi|215445478|ref|ZP_03432230.1| hypothetical protein MtubT_05888 [Mycobacterium tuberculosis T85] gi|218753008|ref|ZP_03531804.1| hypothetical protein MtubG1_05990 [Mycobacterium tuberculosis GM 1503] gi|253799654|ref|YP_003032655.1| hypothetical protein TBMG_02680 [Mycobacterium tuberculosis KZN 1435] gi|254231558|ref|ZP_04924885.1| hypothetical protein hemK [Mycobacterium tuberculosis C] gi|254364197|ref|ZP_04980243.1| hypothetical protein hemK [Mycobacterium tuberculosis str. Haarlem] gi|254550308|ref|ZP_05140755.1| hypothetical protein Mtube_07589 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|260186239|ref|ZP_05763713.1| hypothetical protein MtubCP_09453 [Mycobacterium tuberculosis CPHL_A] gi|260200353|ref|ZP_05767844.1| hypothetical protein MtubT4_09543 [Mycobacterium tuberculosis T46] gi|260204558|ref|ZP_05772049.1| hypothetical protein MtubK8_09658 [Mycobacterium tuberculosis K85] gi|289442739|ref|ZP_06432483.1| hypothetical protein TBLG_03482 [Mycobacterium tuberculosis T46] gi|289446895|ref|ZP_06436639.1| hypothetical protein hemK [Mycobacterium tuberculosis CPHL_A] gi|289554910|ref|ZP_06444120.1| hypothetical protein hemK [Mycobacterium tuberculosis KZN 605] gi|289573963|ref|ZP_06454190.1| conserved hypothetical protein [Mycobacterium tuberculosis K85] gi|289745046|ref|ZP_06504424.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987] gi|289749854|ref|ZP_06509232.1| hypothetical protein hemK [Mycobacterium tuberculosis T92] gi|289757400|ref|ZP_06516778.1| conserved hypothetical protein [Mycobacterium tuberculosis T85] gi|289761455|ref|ZP_06520833.1| hypothetical protein hemK [Mycobacterium tuberculosis GM 1503] gi|294994857|ref|ZP_06800548.1| hypothetical protein Mtub2_10184 [Mycobacterium tuberculosis 210] gi|297633852|ref|ZP_06951632.1| hypothetical protein MtubK4_07004 [Mycobacterium tuberculosis KZN 4207] gi|297730839|ref|ZP_06959957.1| hypothetical protein MtubKR_07094 [Mycobacterium tuberculosis KZN R506] gi|298524804|ref|ZP_07012213.1| hypothetical protein hemK [Mycobacterium tuberculosis 94_M4241A] gi|306781617|ref|ZP_07419954.1| hypothetical protein hemK [Mycobacterium tuberculosis SUMu002] gi|306784024|ref|ZP_07422346.1| hypothetical protein hemK [Mycobacterium tuberculosis SUMu003] gi|306788387|ref|ZP_07426709.1| hypothetical protein hemK [Mycobacterium tuberculosis SUMu004] gi|306792714|ref|ZP_07431016.1| hypothetical protein hemK [Mycobacterium tuberculosis SUMu005] gi|306797120|ref|ZP_07435422.1| hypothetical protein hemK [Mycobacterium tuberculosis SUMu006] gi|306803000|ref|ZP_07439668.1| hypothetical protein hemK [Mycobacterium tuberculosis SUMu008] gi|306807190|ref|ZP_07443858.1| hypothetical protein hemK [Mycobacterium tuberculosis SUMu007] gi|306967389|ref|ZP_07480050.1| hypothetical protein hemK [Mycobacterium tuberculosis SUMu009] gi|313658171|ref|ZP_07815051.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Mycobacterium tuberculosis KZN V2475] gi|31618082|emb|CAD94193.1| PROBABLE HEMK PROTEIN HOMOLOG HEMK [Mycobacterium bovis AF2122/97] gi|124600617|gb|EAY59627.1| hypothetical protein hemK [Mycobacterium tuberculosis C] gi|134149711|gb|EBA41756.1| hypothetical protein hemK [Mycobacterium tuberculosis str. Haarlem] gi|148721045|gb|ABR05670.1| hypothetical protein hemK [Mycobacterium tuberculosis F11] gi|253321157|gb|ACT25760.1| hypothetical protein hemK [Mycobacterium tuberculosis KZN 1435] gi|289415658|gb|EFD12898.1| hypothetical protein TBLG_03482 [Mycobacterium tuberculosis T46] gi|289419853|gb|EFD17054.1| hypothetical protein hemK [Mycobacterium tuberculosis CPHL_A] gi|289439542|gb|EFD22035.1| hypothetical protein hemK [Mycobacterium tuberculosis KZN 605] gi|289538394|gb|EFD42972.1| conserved hypothetical protein [Mycobacterium tuberculosis K85] gi|289685574|gb|EFD53062.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987] gi|289690441|gb|EFD57870.1| hypothetical protein hemK [Mycobacterium tuberculosis T92] gi|289708961|gb|EFD72977.1| hypothetical protein hemK [Mycobacterium tuberculosis GM 1503] gi|289712964|gb|EFD76976.1| conserved hypothetical protein [Mycobacterium tuberculosis T85] gi|298494598|gb|EFI29892.1| hypothetical protein hemK [Mycobacterium tuberculosis 94_M4241A] gi|308325579|gb|EFP14430.1| hypothetical protein hemK [Mycobacterium tuberculosis SUMu002] gi|308331257|gb|EFP20108.1| hypothetical protein hemK [Mycobacterium tuberculosis SUMu003] gi|308335073|gb|EFP23924.1| hypothetical protein hemK [Mycobacterium tuberculosis SUMu004] gi|308338881|gb|EFP27732.1| hypothetical protein hemK [Mycobacterium tuberculosis SUMu005] gi|308342495|gb|EFP31346.1| hypothetical protein hemK [Mycobacterium tuberculosis SUMu006] gi|308346429|gb|EFP35280.1| hypothetical protein hemK [Mycobacterium tuberculosis SUMu007] gi|308350300|gb|EFP39151.1| hypothetical protein hemK [Mycobacterium tuberculosis SUMu008] gi|308355001|gb|EFP43852.1| hypothetical protein hemK [Mycobacterium tuberculosis SUMu009] gi|326902922|gb|EGE49855.1| hypothetical protein hemK [Mycobacterium tuberculosis W-148] gi|328459400|gb|AEB04823.1| hypothetical protein hemK [Mycobacterium tuberculosis KZN 4207] Length = 325 Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 74/221 (33%), Positives = 103/221 (46%), Gaps = 13/221 (5%) Query: 50 SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109 + ++G F V L + F PRPETE ++ A A SLP R + I+D TG+G Sbjct: 88 PLQHLIGTVSFGPVVLHVGPGVFVPRPETEAILAWATAQSLP---ARPL--IVDACTGSG 142 Query: 110 AVCLALLKESPFF----KGVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSDWFSSVEGL 164 A+ +AL + + +G+D S AL+ A+ NA V R D ++G Sbjct: 143 ALAVALAQHRANLGLKARIIGIDDSDCALDYARRNAAGTPVELVRADVTTPCLLPELDGQ 202 Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224 D++VSNPPYI V L EV DP +L GG DG++ + R L GL + Sbjct: 203 VDLMVSNPPYIPDAAV--LEPEVAQHDPHHALFGGPDGMTVISAVVGLAGRWLRPGGLFA 260 Query: 225 VEIGYNQKVDVVRIFESRKLFL-VNAFKDYGGNDRVLLFCR 264 VE V + S KLF+ V A KD G R + R Sbjct: 261 VEHDDTTSSSTVDLVSSTKLFVDVQARKDLAGRPRFVTAMR 301 >gi|34556665|ref|NP_906480.1| protoporphyrinogen oxidase [Wolinella succinogenes DSM 1740] gi|34482379|emb|CAE09380.1| PROTOPORPHYRINOGEN OXIDASE [Wolinella succinogenes] Length = 283 Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 65/234 (27%), Positives = 107/234 (45%), Gaps = 13/234 (5%) Query: 27 DSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL 86 +++L D + + + R L+ E I IL FY+ ++S PRPETE+L+D A Sbjct: 46 ETLLSDEESQNYQSLLKRRLQGEPIEYILERASFYSRDFYVASGVLIPRPETEILIDWAS 105 Query: 87 AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146 + I + R+ ++G G+G + L P DIS +ALE+A+ N G Sbjct: 106 SL----IASHPICRVAEVGIGSGIISSTLALLHPHLTFEASDISPRALEVARENLKRMGA 161 Query: 147 SERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206 R +EG FD+++SNPPYI L +F+P +L GG G Sbjct: 162 ESRITLHLGSLLEPLEGEFDLLLSNPPYIAQNTPLPKPL---NFEPSEALFGGERG---- 214 Query: 207 RTIADGVSRHLNKDGLCSV--EIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258 + + + + K + + E+GY+Q+ + R E + ++D G DR Sbjct: 215 SELLEELIKEAQKRSIPYMIAEMGYDQRGAIERFMERIPHQELRFYQDLAGLDR 268 >gi|87300984|ref|ZP_01083826.1| modification methylase, HemK family protein [Synechococcus sp. WH 5701] gi|87284855|gb|EAQ76807.1| modification methylase, HemK family protein [Synechococcus sp. WH 5701] Length = 334 Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 72/218 (33%), Positives = 109/218 (50%), Gaps = 10/218 (4%) Query: 48 HESIHRILG---WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD-VVRILD 103 H + ++G WR+F L +S PR ETE+L D ALA +L + D Sbjct: 96 HTPLQYLVGVCPWREF---SLAVSPAVLIPRQETEVLADLALALALALPAPAHRPLTWAD 152 Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE- 162 LGTG+G + LAL + +P +G+ VD S +AL A+ N G+ +R W+ + Sbjct: 153 LGTGSGCLALALARAAPKARGLAVDCSAQALAQAEINLEEAGLLDRVTLHLGQWWEPLRP 212 Query: 163 --GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220 G D++VSNPPYI + ++ L VR+ +P ++LDGG DGL R +A G L Sbjct: 213 HWGGLDLVVSNPPYIPTAVLVELEPLVREHEPHLALDGGPDGLEAIRALASGAWAALAPG 272 Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258 G +E ++Q V + + L V + +D G R Sbjct: 273 GWLLLEHHHDQSHAVAELLLACGLVEVTSHRDLEGRWR 310 >gi|320333669|ref|YP_004170380.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Deinococcus maricopensis DSM 21211] gi|319754958|gb|ADV66715.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Deinococcus maricopensis DSM 21211] Length = 279 Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 60/178 (33%), Positives = 88/178 (49%), Gaps = 7/178 (3%) Query: 50 SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109 + +LG ++ +V L ++ PRPETE+L+ LA S R V LD+GTGTG Sbjct: 73 PLQHLLGSVEWGDVALRVTPAALVPRPETEVLLH--LALSALRGVPEPCV--LDVGTGTG 128 Query: 110 AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIV 169 A+ +A+ P D+S AL +A+ NA NG F L +D ++V Sbjct: 129 ALAVAVAHARPDAHVTATDVSDDALALARENATRNGTRVAF--LHADLLHGAPTGLHLVV 186 Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227 SNPPY+ + EV+ DP ++L GG DGL R +A HL G ++E+ Sbjct: 187 SNPPYLPDADRENADPEVQ-HDPPLALYGGADGLDLARQLAAQAPAHLRPGGTLALEL 243 >gi|24582226|ref|NP_609031.2| CG9531 [Drosophila melanogaster] gi|7297118|gb|AAF52386.1| CG9531 [Drosophila melanogaster] Length = 323 Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 73/248 (29%), Positives = 116/248 (46%), Gaps = 29/248 (11%) Query: 21 QVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETE- 79 Q+ ++P L D +RF L+H I+G DF ++ L S F PRPETE Sbjct: 79 QLQLNPGQ-LADFERFLEARCARMPLQH-----IIGEWDFMDITLKTSPSVFIPRPETEE 132 Query: 80 ---LLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136 L++D + V +L++G G+GA+ L++L P ++ S A + Sbjct: 133 FMRLVIDDH--------KNAKHVDLLEVGCGSGAMSLSMLHSLPQVVATAIERSKAATVL 184 Query: 137 AKSNAVTNGVSERFD----TLQSDWF---SSVEGLFDVIVSNPPYIESVIVDCLGLEVRD 189 A NA G+ RF+ T++ D + + + +D+I+SNPPY+++ L EV Sbjct: 185 AAENAKMLGLLNRFEVHNHTMEEDKYLPEALKDKKYDLIISNPPYVKTEEFQFLHPEVVV 244 Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI----FESRKLF 245 ++ +LDGG DGL R + D RHL G +E+G + V I +E R F Sbjct: 245 YENLNALDGGSDGLRVARLVFDLACRHLRPGGKLWLELGNDHPPMVKTIMNLKYEGRLKF 304 Query: 246 LVNAFKDY 253 + Y Sbjct: 305 IAGYSDQY 312 >gi|227529624|ref|ZP_03959673.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Lactobacillus vaginalis ATCC 49540] gi|227350414|gb|EEJ40705.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Lactobacillus vaginalis ATCC 49540] Length = 286 Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 70/255 (27%), Positives = 116/255 (45%), Gaps = 25/255 (9%) Query: 19 SHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPET 78 +H ++ + + + D ++F AI R L E I+G FY ++ D P ET Sbjct: 40 THLLVHNRELMPSDEWQWF-QGAIKRLLNEEPAQYIVGSAPFYGRTFMVNHDVLIPEAET 98 Query: 79 ELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAK 138 LVD L + +++LDLGTG+G + + L E P + D+S AL +A+ Sbjct: 99 AELVDWVL-----KENTSTPLKVLDLGTGSGVIGITLALERPQWNVTLSDVSPAALMVAQ 153 Query: 139 SNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197 N ++ R +QSD F+++ +D+IV+NPPYI + V ++P ++L Sbjct: 154 KNMQRFNLNLRL--VQSDLFANLTNEKYDLIVTNPPYISHDATALMDRSVLKYEPELALF 211 Query: 198 GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ---------KVDVVRIFESR------ 242 +GL Y + ++ HL G E G++Q +VD E R Sbjct: 212 ADENGLGFYHRLFATIASHLTLQGQLFGETGFDQEQVIQELLHRVDRTAQIEPRHDVAGK 271 Query: 243 -KLFLVNAFKDYGGN 256 ++ V F + GGN Sbjct: 272 MRMIHVWDFSNVGGN 286 >gi|116811593|emb|CAL25963.1| CG9531 [Drosophila melanogaster] gi|223966745|emb|CAR93109.1| CG9531-PA [Drosophila melanogaster] gi|223966747|emb|CAR93110.1| CG9531-PA [Drosophila melanogaster] gi|223966761|emb|CAR93117.1| CG9531-PA [Drosophila melanogaster] gi|223966763|emb|CAR93118.1| CG9531-PA [Drosophila melanogaster] gi|223966765|emb|CAR93119.1| CG9531-PA [Drosophila melanogaster] Length = 323 Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 73/248 (29%), Positives = 116/248 (46%), Gaps = 29/248 (11%) Query: 21 QVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETE- 79 Q+ ++P L D +RF L+H I+G DF ++ L S F PRPETE Sbjct: 79 QLQLNPGQ-LADFERFLEARCARMPLQH-----IIGEWDFMDITLKTSPSVFIPRPETEE 132 Query: 80 ---LLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136 L++D + V +L++G G+GA+ L++L P ++ S A + Sbjct: 133 FMRLVIDDH--------KNAKHVDLLEVGCGSGAMSLSMLHSLPQVVATAIERSKAATVL 184 Query: 137 AKSNAVTNGVSERFD----TLQSDWF---SSVEGLFDVIVSNPPYIESVIVDCLGLEVRD 189 A NA G+ RF+ T++ D + + + +D+I+SNPPY+++ L EV Sbjct: 185 AAENAKMLGLLNRFEVHNHTMEEDKYLPEALKDKKYDLIISNPPYVKTEEFQFLHPEVVV 244 Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI----FESRKLF 245 ++ +LDGG DGL R + D RHL G +E+G + V I +E R F Sbjct: 245 YENLNALDGGSDGLRVARLVFDLACRHLRPGGKLWLELGNDHPPMVKTIMNLKYEGRLKF 304 Query: 246 LVNAFKDY 253 + Y Sbjct: 305 IAGYSDQY 312 >gi|116811589|emb|CAL25961.1| CG9531 [Drosophila melanogaster] Length = 323 Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 73/248 (29%), Positives = 116/248 (46%), Gaps = 29/248 (11%) Query: 21 QVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETE- 79 Q+ ++P L D +RF L+H I+G DF ++ L S F PRPETE Sbjct: 79 QLQLNPGQ-LADFERFLEARCARMPLQH-----IIGEWDFMDITLKTSPSVFIPRPETEE 132 Query: 80 ---LLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136 L++D + V +L++G G+GA+ L++L P ++ S A + Sbjct: 133 FMRLVIDDH--------KNAKHVDLLEVGCGSGAMSLSMLHSLPQVVATAIERSKAATVL 184 Query: 137 AKSNAVTNGVSERFD----TLQSDWF---SSVEGLFDVIVSNPPYIESVIVDCLGLEVRD 189 A NA G+ RF+ T++ D + + + +D+I+SNPPY+++ L EV Sbjct: 185 AAENAKMLGLLNRFEVHNHTMEEDKYLPDALKDKKYDLIISNPPYVKTEEFQFLHPEVVV 244 Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI----FESRKLF 245 ++ +LDGG DGL R + D RHL G +E+G + V I +E R F Sbjct: 245 YENLNALDGGSDGLRVARLVFDLACRHLRPGGKLWLELGNDHPPMVKTIMNLKYEGRLKF 304 Query: 246 LVNAFKDY 253 + Y Sbjct: 305 IAGYSDQY 312 >gi|71907353|ref|YP_284940.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Dechloromonas aromatica RCB] gi|71846974|gb|AAZ46470.1| [LSU ribosomal protein L3P]-glutamine N5-methyltransferase [Dechloromonas aromatica RCB] Length = 299 Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 55/133 (41%), Positives = 76/133 (57%), Gaps = 6/133 (4%) Query: 102 LDLGTGTGAVCLALLKESPFFKG--VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 LDL TG+G CLA+L F VD+S A+ +A+ N G+ +R + +QSD F Sbjct: 136 LDLCTGSG--CLAILTALAFPNADVAAVDLSEHAIAVAERNVADYGLYDRIELIQSDAFK 193 Query: 160 SVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 S+EG FD+IVSNPPY+ + V L E +P ++L G DGL R I +HL Sbjct: 194 SLEGRKFDLIVSNPPYVNAESVAALPPEYL-HEPELALGSGEDGLDFTRIILREAKKHLT 252 Query: 219 KDGLCSVEIGYNQ 231 +GL VEIG+N+ Sbjct: 253 DNGLLIVEIGHNR 265 >gi|87160068|ref|YP_494717.1| HemK family modification methylase [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|88196021|ref|YP_500834.1| HemK family modification methylase [Staphylococcus aureus subsp. aureus NCTC 8325] gi|87126042|gb|ABD20556.1| modification methylase, HemK family [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|87203579|gb|ABD31389.1| modification methylase, HemK family, putative [Staphylococcus aureus subsp. aureus NCTC 8325] Length = 250 Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 71/233 (30%), Positives = 114/233 (48%), Gaps = 26/233 (11%) Query: 41 AIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR 100 A+ R L E I I+G+ FY ++S+ PRPETE + L F L ++E D Sbjct: 31 ALQRMLLGEPIQYIVGFASFYGRTFDVNSNCLIPRPETE---EVMLHF-LQQLE--DDAT 84 Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 I+D+GTG+G + + L E P + DIS +A+ +A++NA + +F L D Sbjct: 85 IVDIGTGSGVLAITLKCEKPDLNVIATDISLEAMNMARNNAEKHQSQIQF--LTGDALKP 142 Query: 161 V--EGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217 + EG+ + ++SNPPYI+ + + V F+P +L G + Y +I + + + Sbjct: 143 LINEGIKLNGLISNPPYIDEKDMVTMSPTVTRFEPHQALFADNHGYAIYESIIEDLPHVM 202 Query: 218 NKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK--------DYGGNDRVLLF 262 K EIGYNQ E+ K ++N F D G+DR++ F Sbjct: 203 EKGSPVVFEIGYNQG-------EALKSIILNKFPDKKIDIIKDINGHDRIVSF 248 >gi|66816847|ref|XP_642405.1| hypothetical protein DDB_G0278505 [Dictyostelium discoideum AX4] gi|60470445|gb|EAL68425.1| hypothetical protein DDB_G0278505 [Dictyostelium discoideum AX4] Length = 343 Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 79/260 (30%), Positives = 128/260 (49%), Gaps = 37/260 (14%) Query: 38 LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97 L + I R L +E I+ I+G+R F+ + + T PRP++E +++ + S + ++ Sbjct: 84 LQSFIERRLNNEPINYIIGYRYFWKNKFFCNHSTLIPRPDSETIIEKIIEES--KEKELK 141 Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 + +ILDLGTGTG + L+ L E GVG+D S +AL IA NA+ + +R L DW Sbjct: 142 IKKILDLGTGTGCLLLSTLNEFKDSIGVGIDKSNEALIIANKNAIELSLDKRVSLLNFDW 201 Query: 158 F----SSVEGL----------------------FDVIVSNPPYIESVIVDCLGLEVRDFD 191 + + L FD+++SNPPYI + L V +++ Sbjct: 202 NNYDKNQISKLLSSPSSSSPSSSSNTNNENNEKFDLVISNPPYISNEEFKYLNPIVTEWE 261 Query: 192 PRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS------VEIGYNQKVDVVRIFESRKLF 245 P+ +L +GL Y++IA ++ NKD L S EIG Q+ D+ I E++ F Sbjct: 262 PKTALIADENGLKDYKSIASFLNE--NKDSLLSDNCLIVFEIGKGQEKDIQSIMENKYSF 319 Query: 246 LVNAF-KDYGGNDRVLLFCR 264 + KD R L+F + Sbjct: 320 KYIGYKKDLNSIIRCLVFMK 339 >gi|297157198|gb|ADI06910.1| putative methyltransferase [Streptomyces bingchenggensis BCW-1] Length = 281 Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 64/207 (30%), Positives = 98/207 (47%), Gaps = 9/207 (4%) Query: 40 NAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV 99 A+ R E + I G F + L + F PRPETE S + +++ + DVV Sbjct: 56 EAVARREAREPLQHITGRAFFRYLELQVGPGVFVPRPETE----SVVGWAIDAVRAMDVV 111 Query: 100 R--ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSD 156 I+DL +G+GA+ LAL +E P + V++ AL A+ N + V D L + Sbjct: 112 EPLIVDLCSGSGAIALALAQEVPRSRVHAVELDEGALRWARKNVEGSRVVLHHGDALTA- 170 Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216 ++G D+++SNPPYI + + E RD DP+++L G DGL R + R Sbjct: 171 -LPELDGQVDLVISNPPYIPLTEWEYVAPEARDHDPQLALFSGEDGLDVIRGLERTAHRL 229 Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRK 243 L G+ +E Q V IF + Sbjct: 230 LRHGGVVVIEHADTQGGQVPWIFTEER 256 >gi|195577026|ref|XP_002078374.1| GD22575 [Drosophila simulans] gi|194190383|gb|EDX03959.1| GD22575 [Drosophila simulans] Length = 323 Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 75/251 (29%), Positives = 117/251 (46%), Gaps = 29/251 (11%) Query: 18 SSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPE 77 S Q+ ++P L D +RF L+H I+G DF ++ L S F PRPE Sbjct: 76 SYDQLQLNPGQ-LADLERFLEARCARMPLQH-----IIGEWDFMDITLKTSPSVFIPRPE 129 Query: 78 TE----LLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133 TE L++D + V +L++G G+GA+ L++L P ++ S A Sbjct: 130 TEEFMRLVIDDH--------KNAKHVDLLEVGCGSGAMSLSMLHSLPQVVATAIERSKAA 181 Query: 134 LEIAKSNAVTNGVSERFD----TLQSD-WFSSV--EGLFDVIVSNPPYIESVIVDCLGLE 186 +A NA G+ RF+ T++ D + V + +D+I+SNPPY+++ L E Sbjct: 182 TVLAAENAKMLGLLNRFEVHNHTMEEDKYLPEVLKDKKYDLIISNPPYVKTEEFQFLHPE 241 Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI----FESR 242 V ++ +LDGG DGL R + D RHL G +E+G + V I +E R Sbjct: 242 VVVYENLNALDGGSDGLRVARLVFDLACRHLRPGGKLWLELGNDHPPMVKTIMNLKYEGR 301 Query: 243 KLFLVNAFKDY 253 F+ Y Sbjct: 302 LKFIAGYSDQY 312 >gi|288562706|gb|ADC53569.1| FI13095p [Drosophila melanogaster] Length = 328 Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 73/248 (29%), Positives = 116/248 (46%), Gaps = 29/248 (11%) Query: 21 QVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETE- 79 Q+ ++P L D +RF L+H I+G DF ++ L S F PRPETE Sbjct: 84 QLQLNPGQ-LADFERFLEARCARMPLQH-----IIGEWDFMDITLKTSPSVFIPRPETEE 137 Query: 80 ---LLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136 L++D + V +L++G G+GA+ L++L P ++ S A + Sbjct: 138 FMRLVIDDH--------KNAKHVDLLEVGCGSGAMSLSMLHSLPQVVATAIERSKAATVL 189 Query: 137 AKSNAVTNGVSERFD----TLQSDWF---SSVEGLFDVIVSNPPYIESVIVDCLGLEVRD 189 A NA G+ RF+ T++ D + + + +D+I+SNPPY+++ L EV Sbjct: 190 AAENAKMLGLLNRFEVHNHTMEEDKYLPEALKDKKYDLIISNPPYVKTEEFQFLHPEVVV 249 Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI----FESRKLF 245 ++ +LDGG DGL R + D RHL G +E+G + V I +E R F Sbjct: 250 YENLNALDGGSDGLRVARLVFDLACRHLRPGGKLWLELGNDHPPMVKTIMNLKYEGRLKF 309 Query: 246 LVNAFKDY 253 + Y Sbjct: 310 IAGYSDQY 317 >gi|289741777|gb|ADD19636.1| hemK methyltransferase family member 1 [Glossina morsitans morsitans] Length = 330 Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 67/221 (30%), Positives = 106/221 (47%), Gaps = 19/221 (8%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV---VRILDLGTG 107 + ILG DF ++ L + F PRPETE V + E R+V + +L++G G Sbjct: 109 LQHILGEWDFMDLTLKTAPTVFIPRPETEEFVSKVIE------EYRNVKQPIDMLEVGCG 162 Query: 108 TGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD-----TLQSDWFSS-- 160 +GA+ LA+L P ++ S A +A NA + +S+RF T ++++ Sbjct: 163 SGAISLAILNALPHVTSTAIERSKVATTLAWENAKSLKLSDRFTPYNHTTSKNNYLPKEL 222 Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220 + FD+IVSNPPY+ + L EV ++ +LDGG DGL R + D HL Sbjct: 223 ADRKFDLIVSNPPYVRTEEFPLLQPEVTLYENLNALDGGQDGLQIARLVFDLACLHLRPG 282 Query: 221 GLCSVEIGYNQKVDVVRIFESR---KLFLVNAFKDYGGNDR 258 G +E+G V I + +L ++++ D DR Sbjct: 283 GKLWLELGSEHPPLVKTIMNLKYEGRLRFISSYIDQYKRDR 323 >gi|319785044|ref|YP_004144520.1| modification methylase, HemK family [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317170932|gb|ADV14470.1| modification methylase, HemK family [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 254 Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 62/212 (29%), Positives = 102/212 (48%), Gaps = 10/212 (4%) Query: 56 GWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL 115 G DF ++L ++ PRPETELL +AL ++ R R V R++D+ G G + A+ Sbjct: 38 GRTDFMGLKLVVAPGVLVPRPETELLGSTAL--NVLRELNRPVPRVVDMCCGAGNLACAI 95 Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS-----VEGLFDVIVS 170 + P + D++ +E N G++ R LQ D F+S +EG D++V Sbjct: 96 GYKVPTARVWASDLTDSCVETTCRNVAHLGLAGRISVLQGDLFNSFSGLELEGTIDLVVC 155 Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS-HYRTIADGVSRHLNKDGLCSVEIGY 229 NPPYI ++ + + +PR + G GLS H R I + +L + G+ E+G Sbjct: 156 NPPYISEKRLENDRAHLMELEPREAFAAGPYGLSIHMRVIKE-AQHYLRQGGMLLFEVGL 214 Query: 230 NQKVDVVRIFESRKLF-LVNAFKDYGGNDRVL 260 Q V+ + E K + + + G RV+ Sbjct: 215 GQDRQVMSLVERSKAYESIRTVANKAGEARVV 246 >gi|302787959|ref|XP_002975749.1| hypothetical protein SELMODRAFT_103487 [Selaginella moellendorffii] gi|300156750|gb|EFJ23378.1| hypothetical protein SELMODRAFT_103487 [Selaginella moellendorffii] Length = 336 Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 65/205 (31%), Positives = 94/205 (45%), Gaps = 15/205 (7%) Query: 57 WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116 WRD L + PRPET+ L+D A A E V + DLGTG+GA+ + + Sbjct: 127 WRDLV---LGVQEGVLIPRPETKQLIDLAAAAMDGNSELARGVWV-DLGTGSGAIAIGIA 182 Query: 117 KESPFFKGVG----VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIV 169 + G G VD S A+ +A++NA + E ++ W + + G IV Sbjct: 183 R---LLDGRGSVIAVDASEVAIAVAEANARRYKLQEAVTLVKGSWLTPLRDEAGKLSGIV 239 Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI-G 228 SNPPYI S + L EV +P +LDGG+DG+ H I G L G ++E G Sbjct: 240 SNPPYIPSRNLGRLQAEVGKHEPICALDGGVDGIDHLAEICQGACWALKSGGFLALETDG 299 Query: 229 YNQKVDVVRIFESRKLFLVNAFKDY 253 Q V +I + + KD+ Sbjct: 300 GEQAQTVAKILSDKPFEDIKVVKDF 324 >gi|149907916|ref|ZP_01896584.1| putative adenine-specific methylase [Moritella sp. PE36] gi|149808922|gb|EDM68853.1| putative adenine-specific methylase [Moritella sp. PE36] Length = 309 Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 53/131 (40%), Positives = 75/131 (57%), Gaps = 2/131 (1%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 +RILD+ TG+G + +AL P + VDI A+E+A+ N +GV + +QSD F Sbjct: 134 MRILDMCTGSGCIAIALSHAFPDSEIDAVDIEHGAIEVAEINIQEHGVENQVTPIQSDLF 193 Query: 159 SSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217 S++EGL +D+IVSNPPY++ +D L E + +P I L G DGL + L Sbjct: 194 SNLEGLRYDMIVSNPPYVDQEDIDNLPDEFK-HEPEIGLQSGFDGLELTLKMLAQAPDML 252 Query: 218 NKDGLCSVEIG 228 N GL VEIG Sbjct: 253 NDGGLLFVEIG 263 >gi|91776222|ref|YP_545978.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Methylobacillus flagellatus KT] gi|91710209|gb|ABE50137.1| [LSU ribosomal protein L3P]-glutamine N5-methyltransferase [Methylobacillus flagellatus KT] Length = 299 Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 56/156 (35%), Positives = 87/156 (55%), Gaps = 7/156 (4%) Query: 78 TELLVDSALAFSLPRIEKRDVVR-ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136 ELL DS P IE ++V D+ TG+G + + L P VDIS AL + Sbjct: 116 AELLEDSLS----PWIEYPEMVESAADICTGSGCLGVLLANAFPNAHIDVVDISPDALAV 171 Query: 137 AKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195 A N G+ ++ ++SD FS+++G +D+I+SNPPY+++ + L E R+ +P I+ Sbjct: 172 ASINIRNYGLEDQITAIESDMFSNLQGRTYDIIISNPPYVDASSMALLPQEYRN-EPEIA 230 Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231 L G GL H + + +HLN +GL VEIG+N+ Sbjct: 231 LGSGPTGLDHTHVLLNEAKKHLNDNGLLVVEIGHNR 266 >gi|269941716|emb|CBI50123.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus TW20] gi|329314802|gb|AEB89215.1| Modification methylase HemK family protein [Staphylococcus aureus subsp. aureus T0131] gi|329723986|gb|EGG60510.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Staphylococcus aureus subsp. aureus 21189] Length = 277 Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 71/233 (30%), Positives = 114/233 (48%), Gaps = 26/233 (11%) Query: 41 AIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR 100 A+ R L E I I+G+ FY ++S+ PRPETE + L F L ++E D Sbjct: 58 ALQRMLLGEPIQYIVGFASFYGRTFDVNSNCLIPRPETE---EVMLHF-LQQLE--DDAT 111 Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 I+D+GTG+G + + L E P + DIS +A+ +A++NA + +F L D Sbjct: 112 IVDIGTGSGVLAITLKCEKPDLNVIATDISLEAMNMARNNAEKHQSQIQF--LTGDALKP 169 Query: 161 V--EGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217 + EG+ + ++SNPPYI+ + + V F+P +L G + Y +I + + + Sbjct: 170 LINEGIKLNGLISNPPYIDEKDMVTMSPTVTRFEPHQALFADNHGYAIYESIIEDLPHVM 229 Query: 218 NKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK--------DYGGNDRVLLF 262 K EIGYNQ E+ K ++N F D G+DR++ F Sbjct: 230 EKGSPVVFEIGYNQG-------EALKSIILNKFPDKKIDIIKDINGHDRIVSF 275 >gi|218296520|ref|ZP_03497248.1| modification methylase, HemK family [Thermus aquaticus Y51MC23] gi|218243062|gb|EED09594.1| modification methylase, HemK family [Thermus aquaticus Y51MC23] Length = 272 Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 64/203 (31%), Positives = 99/203 (48%), Gaps = 13/203 (6%) Query: 25 DPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDS 84 P + R R L R L + +LG +F+ + L ++ PRPETE LV+ Sbjct: 44 PPPPGAEARARELLK----RRLSGYPLQYLLGEVEFFGLPLKVAEGVLIPRPETEGLVEL 99 Query: 85 ALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN 144 AL+ LP R+LD+GTGTGA+ LAL + P + ++ +AL +A+ NA Sbjct: 100 ALSLPLP-----PRPRVLDVGTGTGAIALALKRHLPEAEVHATEVDPRALALAEENARRL 154 Query: 145 GVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204 G+ F L++ + GL D+IVSNPPY+ + E+ F+ ++L G +GL Sbjct: 155 GLPVHF--LKAPLTGGLRGL-DLIVSNPPYLPEAYREVAPKEL-AFENPLALYAGPEGLD 210 Query: 205 HYRTIADGVSRHLNKDGLCSVEI 227 R +A L G +E+ Sbjct: 211 VARPLAGEAWEALRPGGFLLLEL 233 >gi|194468251|ref|ZP_03074237.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Lactobacillus reuteri 100-23] gi|194453104|gb|EDX42002.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Lactobacillus reuteri 100-23] Length = 288 Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 56/205 (27%), Positives = 96/205 (46%), Gaps = 7/205 (3%) Query: 37 FLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR 96 + +AI R L HE I+G FY ++ + P ET L+D L +P Sbjct: 60 WWKDAITRLLNHEPAQYIVGQAPFYGRTFKVNKNVLIPEAETAELIDWVLQ-EMPSCP-- 116 Query: 97 DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 +++LDLGTG+G + + L E P + DIS AL +A+ N + ++SD Sbjct: 117 --LKVLDLGTGSGVIGITLALERPNWHVSLSDISPAALAVAQENMAKFNL--ELPLIKSD 172 Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216 F +++ +D+IV+NPPYI+ + + + +P ++L GL Y + ++ Sbjct: 173 LFENIDQQYDLIVTNPPYIDPDDTGEIDQAILENEPALALFANERGLGFYHRLFKQAGQY 232 Query: 217 LNKDGLCSVEIGYNQKVDVVRIFES 241 L G E GY+Q+ + + Sbjct: 233 LTTTGQIFGETGYDQEESIQELLHQ 257 >gi|289450591|ref|YP_003475654.1| methyltransferase, HemK family [Clostridiales genomosp. BVAB3 str. UPII9-5] gi|289185138|gb|ADC91563.1| methyltransferase, HemK family [Clostridiales genomosp. BVAB3 str. UPII9-5] Length = 318 Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 73/252 (28%), Positives = 111/252 (44%), Gaps = 15/252 (5%) Query: 26 PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85 P + + Q+ F A+ R + E I G +F + PR +TE+L ++A Sbjct: 62 PAAAAAELQKKFRA-ALRRRDEGEPWAYIWGQINFLGREFFTDTSVLIPRSDTEILWEAA 120 Query: 86 LAFSLPRIEKRD-VVRILDLGTGTGAVCLALLKE-----SPFFKGVGVDISCKALEIAKS 139 +A + ++R +RIL+L TG+G + ++LL E P V DIS A+ + + Sbjct: 121 VAGAKKIFQQRGRALRILELCTGSGCLIISLLNELAALNIPVELAVATDISAAAIRLVER 180 Query: 140 NAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195 N L D VE G FD ++NPPY+ L EVR+++PR++ Sbjct: 181 NRQHLCPDLPLVRLTGDLLEPVEAAGLGEFDFCLANPPYVTPAEYTALPDEVRNYEPRLA 240 Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCS----VEIGYNQKVDVVRIFESRKLFLVNAFK 251 L IDGL YR I V + + VE G Q+ + + E+ V Sbjct: 241 LTDEIDGLDFYRRILHDVKLYGRNSKAAALYLWVEHGMTQRDAITEVAEAEGWLPVEYRD 300 Query: 252 DYGGNDRVLLFC 263 DY G RV FC Sbjct: 301 DYAGLPRVCGFC 312 >gi|260102571|ref|ZP_05752808.1| protoporphyrinogen oxidase [Lactobacillus helveticus DSM 20075] gi|260083598|gb|EEW67718.1| protoporphyrinogen oxidase [Lactobacillus helveticus DSM 20075] gi|328468716|gb|EGF39698.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Lactobacillus helveticus MTCC 5463] Length = 280 Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 76/258 (29%), Positives = 127/258 (49%), Gaps = 19/258 (7%) Query: 11 LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70 L L+ + + D VL D Q I + K S ILG+ F+ ++ + Sbjct: 28 LAERLNLTPSEFELKQDMVLSDDQLKQANKDIKKLAKGVSPQYILGYAWFFGYKIMVQRG 87 Query: 71 TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV----- 125 PR ETE LV+ ++L ++ D ++LDLGTG+G + +AL KE+ KG+ Sbjct: 88 VLIPRFETEELVE----WTLKSLKSGD--KVLDLGTGSGCITVALAKEAEK-KGIKDLTL 140 Query: 126 -GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184 DI+ AL ++ N +T + T +++ +E FD I+SNPPYI++ + Sbjct: 141 YASDITDAALRTSEENFLTYDLD--VVTRKANVLIGLEK-FDKIISNPPYIKTTEKKEMD 197 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 V +P+ +L G DGL Y+ A V HLN G +E G++++ + +F +++L Sbjct: 198 ENVLQNEPKEALFAGNDGLDFYKKFAKQVRDHLNSHGEFFLEFGFSEEDQLKELF-AKEL 256 Query: 245 --FLVNAFKDYGGNDRVL 260 F + KD G R++ Sbjct: 257 PDFDIEFRKDMAGKPRMV 274 >gi|295428704|ref|ZP_06821330.1| protein-(glutamine-N5) methyltransferase [Staphylococcus aureus subsp. aureus EMRSA16] gi|283471334|emb|CAQ50545.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Staphylococcus aureus subsp. aureus ST398] gi|295127374|gb|EFG57014.1| protein-(glutamine-N5) methyltransferase [Staphylococcus aureus subsp. aureus EMRSA16] Length = 277 Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 71/233 (30%), Positives = 114/233 (48%), Gaps = 26/233 (11%) Query: 41 AIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR 100 A+ R L E I I+G+ FY ++S+ PRPETE + L F L ++E D Sbjct: 58 ALQRMLLGEPIQYIVGFASFYGRTFDVNSNCLIPRPETE---EVMLHF-LQQLE--DDAT 111 Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 I+D+GTG+G + + L E P + DIS +A+ +A++NA + +F L D Sbjct: 112 IVDIGTGSGVLAITLKCEKPDLNVIATDISLEAMNMARNNAEKHQSQIQF--LTGDALKP 169 Query: 161 V--EGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217 + EG+ + ++SNPPYI+ + + V F+P +L G + Y +I + + + Sbjct: 170 LIKEGIKLNGLISNPPYIDEKDMVTMSPTVTRFEPHQALFADNHGYAIYESIIEDLPHVM 229 Query: 218 NKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK--------DYGGNDRVLLF 262 K EIGYNQ E+ K ++N F D G+DR++ F Sbjct: 230 EKGSPVVFEIGYNQG-------EALKSIILNKFPDKKIDIIKDINGHDRIVSF 275 >gi|87122988|ref|ZP_01078848.1| putative HemK protein, Methylase of polypeptide chain release factors [Marinomonas sp. MED121] gi|86161725|gb|EAQ63030.1| putative HemK protein, Methylase of polypeptide chain release factors [Marinomonas sp. MED121] Length = 234 Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 69/206 (33%), Positives = 98/206 (47%), Gaps = 8/206 (3%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D L V G+++ P+ + + R + + LK + I ILG + F+ L Sbjct: 30 DVQLLLAEVLGVNTSYFYTWPEKPVSEEDRARFDALLAQRLKGKPIAYILGCQAFWTFEL 89 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 +S T PR +TE LV+ L I I+DLGTGTGAV LAL E Sbjct: 90 AVSEFTLIPRSDTECLVEIGLEL----IADVKSPSIVDLGTGTGAVALALASERHDANVS 145 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLG 184 VD+ +A+E+A+ N ++ D QS WF +V FD+IVSNPPYI+ Sbjct: 146 AVDLIPEAVELARQN--NQKLNLNVDIQQSSWFDNVATTDFDLIVSNPPYIDPEDHHLDE 203 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIA 210 +VR F+P+ +L G S IA Sbjct: 204 GDVR-FEPKSALIADQKGYSDIEIIA 228 >gi|309803195|ref|ZP_07697292.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Lactobacillus iners LactinV 11V1-d] gi|309805667|ref|ZP_07699708.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Lactobacillus iners LactinV 09V1-c] gi|309806343|ref|ZP_07700356.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Lactobacillus iners LactinV 03V1-b] gi|309809925|ref|ZP_07703773.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Lactobacillus iners SPIN 2503V10-D] gi|308164703|gb|EFO66953.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Lactobacillus iners LactinV 11V1-d] gi|308165027|gb|EFO67269.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Lactobacillus iners LactinV 09V1-c] gi|308167327|gb|EFO69493.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Lactobacillus iners LactinV 03V1-b] gi|308169713|gb|EFO71758.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Lactobacillus iners SPIN 2503V10-D] Length = 279 Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 76/258 (29%), Positives = 124/258 (48%), Gaps = 18/258 (6%) Query: 11 LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70 L L+ Q + D L Q + + + K S I+G F + + Sbjct: 27 LAERQNLTPSQYRLQLDQDLPKEQLTQIKKDLNKLHKGMSPQYIVGHAWFLGYSIDVHPG 86 Query: 71 TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV----- 125 PR ETE LV AL + +D ++LDLGTG+GA+ +AL K++ K + Sbjct: 87 VLIPRFETEELVTWALDYL------KDNSKVLDLGTGSGAITVALAKKAEC-KNINNIVY 139 Query: 126 -GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184 DI+ AL ++ N + +++ T ++D +E FD+I+SNPPYI++ D + Sbjct: 140 YASDITDSALRQSEENFLKFNLNDII-TRKADVLIGLEK-FDLIISNPPYIKNSEKDLMD 197 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 V +P +L G DGL YR V +HLNK+G +E G++QK + +F +++L Sbjct: 198 QNVIKNEPEEALFAGADGLDFYRRFVKQVPKHLNKNGHFFLEFGFSQKDLLAELF-AKEL 256 Query: 245 --FLVNAFKDYGGNDRVL 260 F + D G R++ Sbjct: 257 PEFTIEFKNDLAGKPRMV 274 >gi|116811575|emb|CAL25954.1| CG9531 [Drosophila melanogaster] gi|116811577|emb|CAL25955.1| CG9531 [Drosophila melanogaster] gi|116811581|emb|CAL25957.1| CG9531 [Drosophila melanogaster] gi|116811585|emb|CAL25959.1| CG9531 [Drosophila melanogaster] gi|116811587|emb|CAL25960.1| CG9531 [Drosophila melanogaster] gi|116811595|emb|CAL25964.1| CG9531 [Drosophila melanogaster] gi|223966749|emb|CAR93111.1| CG9531-PA [Drosophila melanogaster] gi|223966755|emb|CAR93114.1| CG9531-PA [Drosophila melanogaster] Length = 323 Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 73/248 (29%), Positives = 115/248 (46%), Gaps = 29/248 (11%) Query: 21 QVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETE- 79 Q+ ++P L D +RF L+H I+G DF ++ L S F PRPETE Sbjct: 79 QLQLNPGQ-LADFERFLEARCARMPLQH-----IIGEWDFMDITLKTSPSVFIPRPETEE 132 Query: 80 ---LLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136 L++D + V +L++G G+GA+ L++L P ++ S A + Sbjct: 133 FMRLVIDDH--------KNAKHVDLLEVGCGSGAMSLSMLHSLPQVVATAIERSKAATVL 184 Query: 137 AKSNAVTNGVSERFD----TLQSDWFSS---VEGLFDVIVSNPPYIESVIVDCLGLEVRD 189 A NA G+ RF+ T++ D + + +D+I+SNPPY+++ L EV Sbjct: 185 AAENAKMLGLLNRFEVHNHTMEEDKYLPDVLKDKKYDLIISNPPYVKTEEFQFLHPEVVV 244 Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI----FESRKLF 245 ++ +LDGG DGL R + D RHL G +E+G + V I +E R F Sbjct: 245 YENLNALDGGSDGLRVARLVFDLACRHLRPGGKLWLELGNDHPPMVKTIMNLKYEGRLKF 304 Query: 246 LVNAFKDY 253 + Y Sbjct: 305 IAGYSDQY 312 >gi|57652139|ref|YP_186924.1| HemK family modification methylase [Staphylococcus aureus subsp. aureus COL] gi|151222233|ref|YP_001333055.1| modification methylase HemK family protein [Staphylococcus aureus subsp. aureus str. Newman] gi|161510322|ref|YP_001575981.1| HemK family methyltransferase [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|221141636|ref|ZP_03566129.1| HemK family methyltransferase [Staphylococcus aureus subsp. aureus str. JKD6009] gi|258453173|ref|ZP_05701164.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Staphylococcus aureus A5948] gi|262049284|ref|ZP_06022159.1| hypothetical protein SAD30_0495 [Staphylococcus aureus D30] gi|262052619|ref|ZP_06024813.1| hypothetical protein SA930_2016 [Staphylococcus aureus 930918-3] gi|282923105|ref|ZP_06330790.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Staphylococcus aureus A9765] gi|284025151|ref|ZP_06379549.1| HemK family methyltransferase [Staphylococcus aureus subsp. aureus 132] gi|294850087|ref|ZP_06790824.1| protein-(glutamine-N5) methyltransferase [Staphylococcus aureus A9754] gi|304379298|ref|ZP_07362037.1| protein-(glutamine-N5) methyltransferase [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|57286325|gb|AAW38419.1| modification methylase, HemK family [Staphylococcus aureus subsp. aureus COL] gi|150375033|dbj|BAF68293.1| modification methylase HemK family protein [Staphylococcus aureus subsp. aureus str. Newman] gi|160369131|gb|ABX30102.1| HemK family methyltransferase [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|257859119|gb|EEV81976.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Staphylococcus aureus A5948] gi|259159489|gb|EEW44539.1| hypothetical protein SA930_2016 [Staphylococcus aureus 930918-3] gi|259162649|gb|EEW47216.1| hypothetical protein SAD30_0495 [Staphylococcus aureus D30] gi|282593296|gb|EFB98293.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Staphylococcus aureus A9765] gi|294823035|gb|EFG39467.1| protein-(glutamine-N5) methyltransferase [Staphylococcus aureus A9754] gi|302751998|gb|ADL66175.1| modification methylase HemK family protein [Staphylococcus aureus subsp. aureus str. JKD6008] gi|304342157|gb|EFM08057.1| protein-(glutamine-N5) methyltransferase [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|315196949|gb|EFU27291.1| HemK family methyltransferase [Staphylococcus aureus subsp. aureus CGS01] gi|320140711|gb|EFW32563.1| protein-(glutamine-N5) methyltransferase [Staphylococcus aureus subsp. aureus MRSA131] gi|320143687|gb|EFW35464.1| protein-(glutamine-N5) methyltransferase [Staphylococcus aureus subsp. aureus MRSA177] Length = 278 Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 71/233 (30%), Positives = 114/233 (48%), Gaps = 26/233 (11%) Query: 41 AIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR 100 A+ R L E I I+G+ FY ++S+ PRPETE + L F L ++E D Sbjct: 59 ALQRMLLGEPIQYIVGFASFYGRTFDVNSNCLIPRPETE---EVMLHF-LQQLE--DDAT 112 Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 I+D+GTG+G + + L E P + DIS +A+ +A++NA + +F L D Sbjct: 113 IVDIGTGSGVLAITLKCEKPDLNVIATDISLEAMNMARNNAEKHQSQIQF--LTGDALKP 170 Query: 161 V--EGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217 + EG+ + ++SNPPYI+ + + V F+P +L G + Y +I + + + Sbjct: 171 LINEGIKLNGLISNPPYIDEKDMVTMSPTVTRFEPHQALFADNHGYAIYESIIEDLPHVM 230 Query: 218 NKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK--------DYGGNDRVLLF 262 K EIGYNQ E+ K ++N F D G+DR++ F Sbjct: 231 EKGSPVVFEIGYNQG-------EALKSIILNKFPDKKIDIIKDINGHDRIVSF 276 >gi|119470803|ref|ZP_01613414.1| N5-glutamine methyltransferase [Alteromonadales bacterium TW-7] gi|119446030|gb|EAW27309.1| N5-glutamine methyltransferase [Alteromonadales bacterium TW-7] Length = 311 Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 56/137 (40%), Positives = 78/137 (56%), Gaps = 2/137 (1%) Query: 93 IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152 +E V RILDL TG+G + +AL + + VDIS +ALE+ N +S+R Sbjct: 135 VEPNSVNRILDLCTGSGCIAIALAQAFEQAQVDAVDISYEALEVTDININDYMLSDRVLP 194 Query: 153 LQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIAD 211 +QSD FS VEG +D+IV+NPPY+++ + L E +P + L G DGL RTI Sbjct: 195 IQSDVFSGVEGQKYDLIVANPPYVDAEDMADLPREFH-HEPELGLASGHDGLDVTRTILS 253 Query: 212 GVSRHLNKDGLCSVEIG 228 S HL +GL VE+G Sbjct: 254 EASNHLTDNGLLFVEVG 270 >gi|253733049|ref|ZP_04867214.1| HemK family methyltransferase [Staphylococcus aureus subsp. aureus TCH130] gi|253728957|gb|EES97686.1| HemK family methyltransferase [Staphylococcus aureus subsp. aureus TCH130] Length = 278 Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 71/233 (30%), Positives = 114/233 (48%), Gaps = 26/233 (11%) Query: 41 AIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR 100 A+ R L E I I+G+ FY ++S+ PRPETE + L F L ++E D Sbjct: 59 ALQRMLLGEPIQYIVGFASFYGRTFDVNSNCLIPRPETE---EVMLHF-LQQLE--DDAT 112 Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 I+D+GTG+G + + L E P + DIS +A+ +A++NA + +F L D Sbjct: 113 IVDIGTGSGVLAITLKCEKPDLNVIATDISLEAMNMARNNAEKHQSQIQF--LTGDALKP 170 Query: 161 V--EGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217 + EG+ + ++SNPPYI+ + + V F+P +L G + Y +I + + + Sbjct: 171 LINEGIKLNGLISNPPYIDEKDMVTMSPTVTRFEPHQALFADNHGYAIYESIIEDLPHVM 230 Query: 218 NKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK--------DYGGNDRVLLF 262 K EIGYNQ E+ K ++N F D G+DR++ F Sbjct: 231 EKGSPVVFEIGYNQG-------EALKSIILNKFPDKKIDIIKDINGHDRIVSF 276 >gi|223966751|emb|CAR93112.1| CG9531-PA [Drosophila melanogaster] gi|223966757|emb|CAR93115.1| CG9531-PA [Drosophila melanogaster] gi|223966759|emb|CAR93116.1| CG9531-PA [Drosophila melanogaster] Length = 323 Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 73/248 (29%), Positives = 115/248 (46%), Gaps = 29/248 (11%) Query: 21 QVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETE- 79 Q+ ++P L D +RF L+H I+G DF ++ L S F PRPETE Sbjct: 79 QLQLNPGQ-LADFERFLEARCARMPLQH-----IIGEWDFMDITLKTSPSVFIPRPETEE 132 Query: 80 ---LLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136 L++D + V +L++G G+GA+ L++L P ++ S A + Sbjct: 133 FMRLVIDDH--------KNAKHVDLLEVGCGSGAMSLSMLHSLPQVVATAIERSKAATVL 184 Query: 137 AKSNAVTNGVSERFD----TLQSDWFSS---VEGLFDVIVSNPPYIESVIVDCLGLEVRD 189 A NA G+ RF+ T++ D + + +D+I+SNPPY+++ L EV Sbjct: 185 AAENAKMLGLLNRFEVHNHTMEEDKYLPDVLKDKKYDLIISNPPYVKTEEFQFLHPEVVV 244 Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI----FESRKLF 245 ++ +LDGG DGL R + D RHL G +E+G + V I +E R F Sbjct: 245 YENLNALDGGSDGLRVARLVFDLACRHLRPGGKLWLELGNDHPPMVKTIMNLKYEGRLKF 304 Query: 246 LVNAFKDY 253 + Y Sbjct: 305 IAGYSDQY 312 >gi|116811579|emb|CAL25956.1| CG9531 [Drosophila melanogaster] Length = 323 Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 73/248 (29%), Positives = 115/248 (46%), Gaps = 29/248 (11%) Query: 21 QVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETE- 79 Q+ ++P L D +RF L+H I+G DF ++ L S F PRPETE Sbjct: 79 QLQLNPGQ-LADFERFLEARCARMPLQH-----IIGEWDFMDITLKTSPSVFIPRPETEE 132 Query: 80 ---LLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136 L++D + V +L++G G+GA+ L++L P ++ S A + Sbjct: 133 FMRLVIDDH--------KNAKHVDLLEVGCGSGAMSLSMLHSLPQVVATAIERSKAATVL 184 Query: 137 AKSNAVTNGVSERFD----TLQSDWFSS---VEGLFDVIVSNPPYIESVIVDCLGLEVRD 189 A NA G+ RF+ T++ D + + +D+I+SNPPY+++ L EV Sbjct: 185 AAENAKMLGLLNRFEVHNHTMEEDKYLPDVLKDKKYDLIISNPPYVKTEEFQFLHPEVVV 244 Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI----FESRKLF 245 ++ +LDGG DGL R + D RHL G +E+G + V I +E R F Sbjct: 245 YENLNALDGGSDGLRVARLVFDLACRHLRPGGKLWLELGNDHPPMVKTIMNLKYEGRLKF 304 Query: 246 LVNAFKDY 253 + Y Sbjct: 305 IAGYSDQY 312 >gi|49484341|ref|YP_041565.1| hypothetical protein SAR2205 [Staphylococcus aureus subsp. aureus MRSA252] gi|257426256|ref|ZP_05602671.1| modification methylase [Staphylococcus aureus subsp. aureus 55/2053] gi|257428914|ref|ZP_05605308.1| modification methylase HemK family protein [Staphylococcus aureus subsp. aureus 65-1322] gi|257431523|ref|ZP_05607896.1| modification methylase HemK family protein [Staphylococcus aureus subsp. aureus 68-397] gi|257434232|ref|ZP_05610582.1| modification methylase [Staphylococcus aureus subsp. aureus E1410] gi|257437145|ref|ZP_05613185.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Staphylococcus aureus subsp. aureus M876] gi|282904786|ref|ZP_06312660.1| N5 glutamine methyltransferase, release factor-specific [Staphylococcus aureus subsp. aureus C160] gi|282906461|ref|ZP_06314312.1| protein-glutamine-N5 methyltransferase release factor-specific [Staphylococcus aureus subsp. aureus Btn1260] gi|282909430|ref|ZP_06317245.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Staphylococcus aureus subsp. aureus WW2703/97] gi|282911682|ref|ZP_06319481.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Staphylococcus aureus subsp. aureus WBG10049] gi|282914966|ref|ZP_06322746.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Staphylococcus aureus subsp. aureus M899] gi|282920295|ref|ZP_06328019.1| protein-(glutamine-N5) methyltransferase [Staphylococcus aureus subsp. aureus C427] gi|282925506|ref|ZP_06333160.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Staphylococcus aureus subsp. aureus C101] gi|283958897|ref|ZP_06376342.1| N5 glutamine methyltransferase [Staphylococcus aureus subsp. aureus A017934/97] gi|293509034|ref|ZP_06667821.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Staphylococcus aureus subsp. aureus 58-424] gi|293510949|ref|ZP_06669648.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Staphylococcus aureus subsp. aureus M809] gi|293547551|ref|ZP_06672226.1| N5 glutamine methyltransferase [Staphylococcus aureus subsp. aureus M1015] gi|297589816|ref|ZP_06948456.1| protein-(glutamine-N5) methyltransferase [Staphylococcus aureus subsp. aureus MN8] gi|49242470|emb|CAG41186.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus MRSA252] gi|257270961|gb|EEV03134.1| modification methylase [Staphylococcus aureus subsp. aureus 55/2053] gi|257274256|gb|EEV05773.1| modification methylase HemK family protein [Staphylococcus aureus subsp. aureus 65-1322] gi|257277764|gb|EEV08434.1| modification methylase HemK family protein [Staphylococcus aureus subsp. aureus 68-397] gi|257280871|gb|EEV11016.1| modification methylase [Staphylococcus aureus subsp. aureus E1410] gi|257283538|gb|EEV13665.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Staphylococcus aureus subsp. aureus M876] gi|282312907|gb|EFB43308.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Staphylococcus aureus subsp. aureus C101] gi|282316155|gb|EFB46536.1| protein-(glutamine-N5) methyltransferase [Staphylococcus aureus subsp. aureus C427] gi|282321169|gb|EFB51500.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Staphylococcus aureus subsp. aureus M899] gi|282324447|gb|EFB54760.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Staphylococcus aureus subsp. aureus WBG10049] gi|282326700|gb|EFB56998.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Staphylococcus aureus subsp. aureus WW2703/97] gi|282330411|gb|EFB59929.1| protein-glutamine-N5 methyltransferase release factor-specific [Staphylococcus aureus subsp. aureus Btn1260] gi|282594819|gb|EFB99796.1| N5 glutamine methyltransferase, release factor-specific [Staphylococcus aureus subsp. aureus C160] gi|283789615|gb|EFC28438.1| N5 glutamine methyltransferase [Staphylococcus aureus subsp. aureus A017934/97] gi|290919671|gb|EFD96744.1| N5 glutamine methyltransferase [Staphylococcus aureus subsp. aureus M1015] gi|291094738|gb|EFE25010.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Staphylococcus aureus subsp. aureus 58-424] gi|291466234|gb|EFF08761.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Staphylococcus aureus subsp. aureus M809] gi|297576944|gb|EFH95658.1| protein-(glutamine-N5) methyltransferase [Staphylococcus aureus subsp. aureus MN8] gi|312437465|gb|ADQ76536.1| protein-(glutamine-N5) methyltransferase [Staphylococcus aureus subsp. aureus TCH60] gi|315193282|gb|EFU23680.1| hypothetical protein CGSSa00_02196 [Staphylococcus aureus subsp. aureus CGS00] Length = 278 Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 71/233 (30%), Positives = 114/233 (48%), Gaps = 26/233 (11%) Query: 41 AIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR 100 A+ R L E I I+G+ FY ++S+ PRPETE + L F L ++E D Sbjct: 59 ALQRMLLGEPIQYIVGFASFYGRTFDVNSNCLIPRPETE---EVMLHF-LQQLE--DDAT 112 Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 I+D+GTG+G + + L E P + DIS +A+ +A++NA + +F L D Sbjct: 113 IVDIGTGSGVLAITLKCEKPDLNVIATDISLEAMNMARNNAEKHQSQIQF--LTGDALKP 170 Query: 161 V--EGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217 + EG+ + ++SNPPYI+ + + V F+P +L G + Y +I + + + Sbjct: 171 LIKEGIKLNGLISNPPYIDEKDMVTMSPTVTRFEPHQALFADNHGYAIYESIIEDLPHVM 230 Query: 218 NKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK--------DYGGNDRVLLF 262 K EIGYNQ E+ K ++N F D G+DR++ F Sbjct: 231 EKGSPVVFEIGYNQG-------EALKSIILNKFPDKKIDIIKDINGHDRIVSF 276 >gi|289670895|ref|ZP_06491970.1| protein methyltransferase HemK (Protein-glutamine N-methyltransferase hemK) (Protein-(glutamine-N5) MTase [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 281 Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 73/222 (32%), Positives = 108/222 (48%), Gaps = 7/222 (3%) Query: 41 AIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR 100 ++ R E + + G R F+ + L +S T PR +TELLV+ +L R + R R Sbjct: 60 SVQRREAGEPVAYLTGSRGFWTLDLAVSPATLIPRADTELLVE----LALERFDTRPGRR 115 Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 DLGTG+GA+ LA+ E P + + D S AL +A+ NA + + D WF Sbjct: 116 AADLGTGSGAIALAISSERPQAQVIATDASAAALAMARRNAHKHDL-RNVDFRLGHWFGP 174 Query: 161 VEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 + G FD+I SNPPYI + ++R ++P +L G DGL R I HL Sbjct: 175 LAGEAFDLIASNPPYIAAHDPHLQQGDLR-YEPASALASGSDGLDDIRLIVADAPAHLLP 233 Query: 220 DGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 G +E G++Q V + ++ V F+D DRV L Sbjct: 234 GGWLLLEHGWDQGEVVRALLQAVGFVQVATFQDLEARDRVTL 275 >gi|220934410|ref|YP_002513309.1| modification methylase, HemK family [Thioalkalivibrio sp. HL-EbGR7] gi|219995720|gb|ACL72322.1| modification methylase, HemK family [Thioalkalivibrio sp. HL-EbGR7] Length = 303 Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 58/174 (33%), Positives = 91/174 (52%), Gaps = 5/174 (2%) Query: 74 PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133 PR L++ A P I+ V R+LDL TG+G + +A P + DIS A Sbjct: 110 PRSPIAELIEQGFA---PWIDPERVERVLDLCTGSGCIGIACAHAFPDARVDLSDISPDA 166 Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDP 192 L +A+ N +GV++R ++SD F + G +D+IVSNPPY+++ + L E R +P Sbjct: 167 LAVARENIRRHGVADRVRAIRSDLFEGLAGERYDLIVSNPPYVDAADMAALTPEFR-HEP 225 Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246 + L G DGL I HLN G+ VE+G +Q+ + R+ ++ +L Sbjct: 226 VLGLASGEDGLDATLRILRDAPEHLNPGGILVVEVGNSQEALMARLPDAPLTWL 279 >gi|116811591|emb|CAL25962.1| CG9531 [Drosophila melanogaster] Length = 323 Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 73/248 (29%), Positives = 115/248 (46%), Gaps = 29/248 (11%) Query: 21 QVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETE- 79 Q+ ++P L D +RF L+H I+G DF ++ L S F PRPETE Sbjct: 79 QLQLNPGQ-LADFERFLEARCARMPLQH-----IIGEWDFMDITLKTSPSVFIPRPETEE 132 Query: 80 ---LLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136 L++D + V +L++G G+GA+ L++L P ++ S A + Sbjct: 133 FMRLVIDDH--------KNAKHVDLLEVGCGSGAMSLSMLHSLPQVVATAIERSKAATVL 184 Query: 137 AKSNAVTNGVSERFD----TLQSDWFSS---VEGLFDVIVSNPPYIESVIVDCLGLEVRD 189 A NA G+ RF+ T++ D + + +D+I+SNPPY+++ L EV Sbjct: 185 AAENAKMLGLLNRFEVHNHTMEEDKYLPDVLKDKKYDLIISNPPYVKTEEFQFLHPEVVV 244 Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI----FESRKLF 245 ++ +LDGG DGL R + D RHL G +E+G + V I +E R F Sbjct: 245 YENLNALDGGSDGLRVARLVFDLACRHLRPGGKLWLELGNDHPPMVKTIMNLKYEGRLKF 304 Query: 246 LVNAFKDY 253 + Y Sbjct: 305 IAGYSDQY 312 >gi|27819756|gb|AAL29142.2| SD04586p [Drosophila melanogaster] Length = 328 Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 73/248 (29%), Positives = 115/248 (46%), Gaps = 29/248 (11%) Query: 21 QVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETE- 79 Q+ ++P L D +RF L+H I+G DF ++ L S F PRPETE Sbjct: 84 QLQLNPGQ-LADFERFLEARCARMPLQH-----IIGEWDFMDITLKTSPSVFIPRPETEE 137 Query: 80 ---LLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136 L++D + V +L++G G+GA+ L++L P ++ S A + Sbjct: 138 FMRLVIDDH--------KNAKHVDLLEVGCGSGAMSLSMLHSLPQVVATAIERSKAATVL 189 Query: 137 AKSNAVTNGVSERFD----TLQSDWFSS---VEGLFDVIVSNPPYIESVIVDCLGLEVRD 189 A NA G+ RF+ T++ D + + +D+I+SNPPY+++ L EV Sbjct: 190 AAENAKMLGLLNRFEVHNHTMEEDKYLPDVLKDKKYDLIISNPPYVKTEEFQFLHPEVVV 249 Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI----FESRKLF 245 ++ +LDGG DGL R + D RHL G +E+G + V I +E R F Sbjct: 250 YENLNALDGGSDGLRVARLVFDLACRHLRPGGKLWLELGNDHPPMVKTIMNLKYEGRLKF 309 Query: 246 LVNAFKDY 253 + Y Sbjct: 310 IAGYSDQY 317 >gi|332529975|ref|ZP_08405925.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Hylemonella gracilis ATCC 19624] gi|332040448|gb|EGI76824.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Hylemonella gracilis ATCC 19624] Length = 283 Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 66/212 (31%), Positives = 99/212 (46%), Gaps = 24/212 (11%) Query: 59 DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV-RILDLGTGTGAVCLALLK 117 +F+ + L + PRP+TE LVD AL + D +I+DLGTG+GAV LA+ + Sbjct: 76 EFHGMPLQVDGRVLIPRPDTETLVDWALECLTDIGQAEDPPPQIIDLGTGSGAVALAMAR 135 Query: 118 ESPFFKGVG-------VDISCKALEIAKSNAVTNGVSERFDT----LQSDWFSSVEGLFD 166 F G +D+S AL +A++NA ER D + W + + +D Sbjct: 136 ---FLAQTGRTGEVHALDVSPDALALAQANA------ERLDLRVQFMLGAWLTGISARYD 186 Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE 226 +IVSNPPYI L +PR++L G DGL R I +L G +E Sbjct: 187 LIVSNPPYIAEGDPHLAAL---GHEPRLALISGPDGLDAIRIIVRQAPDNLRPGGWLLLE 243 Query: 227 IGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258 G++Q + V + V + +D G +R Sbjct: 244 HGWDQALAVRELLTRAGFADVQSRRDLAGIER 275 >gi|73662076|ref|YP_300857.1| rRNA or tRNA methylase [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|72494591|dbj|BAE17912.1| putative rRNA or tRNA methylase [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 278 Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 71/237 (29%), Positives = 106/237 (44%), Gaps = 16/237 (6%) Query: 33 RQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPR 92 + + +A R L E I ILG + FY ++ PRPETE + + Sbjct: 51 QHKNLFDDATQRMLNDEPIQYILGKQTFYGEVFKVNKHCLIPRPETE----EVMLHFYNQ 106 Query: 93 IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF-- 150 + D V +D+GTG+G + ++L K P + D+ AL +AK+NA + V RF Sbjct: 107 LHSGDCV--VDIGTGSGNIPISLKKLDPSLEVYATDLYTSALSVAKANAKMHQVEIRFLL 164 Query: 151 -DTLQS--DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207 DTL + V GL +SNPPYI+ + V +++P +L +G Y Sbjct: 165 GDTLMPLIEHGIKVNGL----ISNPPYIDDNDALIMDNTVLNYEPHTALFAKNNGYDIYD 220 Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDV-VRIFESRKLFLVNAFKDYGGNDRVLLFC 263 I D + L + EIG+NQ + RI E V KD NDR++ F Sbjct: 221 KIIDQLREVLLPNAKVVFEIGFNQGQTLKQRIIEKYPSLDVQIIKDINNNDRIISFV 277 >gi|226363566|ref|YP_002781348.1| methyltransferase [Rhodococcus opacus B4] gi|226242055|dbj|BAH52403.1| putative methyltransferase [Rhodococcus opacus B4] Length = 260 Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 60/207 (28%), Positives = 93/207 (44%), Gaps = 7/207 (3%) Query: 38 LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97 L + + R + + +LGW +F +R+ + F PR T LV+ A A + P Sbjct: 42 LASMLDRRVAGVPLEHVLGWAEFCGLRIEVDPRVFVPRRRTAFLVEQAAALACPH----- 96 Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 ++DL G+GAV AL + VDI A+ A+ N + D L + Sbjct: 97 -AVVVDLCCGSGAVGAALADTLDGIELYAVDIDPAAVRCARRNLAEPALVFEGD-LYAPL 154 Query: 158 FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217 S++ G D++V+N PY+ + + + E R +PR+SLDGG DGL R + G L Sbjct: 155 PSALRGRIDILVANAPYVPTEAIRLMPPEARFHEPRVSLDGGADGLDIQRRVTAGARDWL 214 Query: 218 NKDGLCSVEIGYNQKVDVVRIFESRKL 244 G +E +Q FE L Sbjct: 215 APGGHLLIETSESQAPRTAGAFEEAGL 241 >gi|125545368|gb|EAY91507.1| hypothetical protein OsI_13142 [Oryza sativa Indica Group] Length = 355 Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 54/180 (30%), Positives = 91/180 (50%), Gaps = 12/180 (6%) Query: 57 WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116 WRD + + PRPETE +VD + +++ + DLGTG+GA+ +A+ Sbjct: 147 WRDLV---VAVREGVLIPRPETEAVVDM-----VAKVQGFEAGWWADLGTGSGAIAVAVA 198 Query: 117 KE-SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNP 172 + P + D+S A+++A+ N G+ ++ + WF +E G ++SNP Sbjct: 199 RMLGPEGRVFATDVSEVAIDVARLNVQRYGMQDKVEIRHGSWFEPLEDLKGKLMGVISNP 258 Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232 PYI + + L EV +P+++LDGG DGL H + +G+S L G E N++ Sbjct: 259 PYIPTEDLPGLQPEVGWHEPKLALDGGKDGLEHLLHLCEGLSSVLKPGGFFVFETNGNKQ 318 >gi|116811583|emb|CAL25958.1| CG9531 [Drosophila melanogaster] Length = 323 Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 73/248 (29%), Positives = 115/248 (46%), Gaps = 29/248 (11%) Query: 21 QVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETE- 79 Q+ ++P L D +RF L+H I+G DF ++ L S F PRPETE Sbjct: 79 QLQLNPGQ-LADFERFLEARCARMPLQH-----IIGEWDFMDITLKTSPSVFIPRPETEE 132 Query: 80 ---LLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136 L++D + V +L++G G+GA+ L++L P ++ S A + Sbjct: 133 FMRLVIDDH--------KNAKHVDLLEVGCGSGAMSLSMLHSLPQVVATAIERSKAATVL 184 Query: 137 AKSNAVTNGVSERFD----TLQSDWFSS---VEGLFDVIVSNPPYIESVIVDCLGLEVRD 189 A NA G+ RF+ T++ D + + +D+I+SNPPY+++ L EV Sbjct: 185 AAENAKMLGLLNRFEVHNHTMEEDKYLPDVLKDKKYDLIISNPPYVKTEEFQFLHPEVVV 244 Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI----FESRKLF 245 ++ +LDGG DGL R + D RHL G +E+G + V I +E R F Sbjct: 245 YENLNALDGGSDGLRVARLVFDLACRHLRPGGKLWLELGNDHPPMVKTIMNLKYEGRLKF 304 Query: 246 LVNAFKDY 253 + Y Sbjct: 305 IAGYSDQY 312 >gi|302878941|ref|YP_003847505.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Gallionella capsiferriformans ES-2] gi|302581730|gb|ADL55741.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Gallionella capsiferriformans ES-2] Length = 302 Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 53/147 (36%), Positives = 84/147 (57%), Gaps = 7/147 (4%) Query: 91 PRIEKRDVV-RILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVS 147 P I + D + ++LDL TG+G CLA+L F VD+S AL +A+ N ++ Sbjct: 128 PWITEPDSIGQVLDLCTGSG--CLAILCADAFPNATVDAVDLSPDALAVAERNVTDYELA 185 Query: 148 ERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206 R ++SD F+ + G +D+I+SNPPY+++ V L E +P++SL G DGL Sbjct: 186 SRISLIESDLFAKLSGRRYDLIISNPPYVDAESVAALPAEYLH-EPKLSLGSGHDGLDAT 244 Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKV 233 R I + HL ++G+ VEIG+N+ + Sbjct: 245 RVILKHAAEHLTENGILIVEIGHNRDI 271 >gi|293606183|ref|ZP_06688547.1| protein-(glutamine-N5) methyltransferase [Achromobacter piechaudii ATCC 43553] gi|292815443|gb|EFF74560.1| protein-(glutamine-N5) methyltransferase [Achromobacter piechaudii ATCC 43553] Length = 316 Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 77/243 (31%), Positives = 119/243 (48%), Gaps = 24/243 (9%) Query: 27 DSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL 86 D VLD +R L +E+ R G R + + R+ + PR L+D L Sbjct: 88 DRVLDLLERRVTERVPAAYLTNEAWLR--GHRFYVDKRVIV------PRSPIAELLDEGL 139 Query: 87 AFSLPRIEKRDVVR-ILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVT 143 A P ++ V +LD+ TG+G CLA+L F VD+S ALE+A+ N Sbjct: 140 A---PWVQDPYAVENVLDMCTGSG--CLAILGAMAFPNAHVDAVDVSADALEVARRNVDD 194 Query: 144 NGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202 G++ER D +S+ F + +DVIV NPPY+ S +D L E R +P+++L GG DG Sbjct: 195 YGLAERLDLHESNLFDQLPACQYDVIVCNPPYVNSGSMDVLPQEYR-HEPQLALAGGDDG 253 Query: 203 LSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDY-GGNDRVLL 261 + R I ++L +G+ +EIG+ + FE+ L + D +D++LL Sbjct: 254 MDLVRRILASAPKYLAPEGVIVLEIGHERD-----FFEAAFPQLSPVWLDTEEASDQILL 308 Query: 262 FCR 264 R Sbjct: 309 LTR 311 >gi|118465310|ref|YP_880756.1| modification methylase, HemK family protein [Mycobacterium avium 104] gi|254774339|ref|ZP_05215855.1| modification methylase, HemK family protein [Mycobacterium avium subsp. avium ATCC 25291] gi|118166597|gb|ABK67494.1| modification methylase, HemK family protein [Mycobacterium avium 104] Length = 312 Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 79/243 (32%), Positives = 112/243 (46%), Gaps = 19/243 (7%) Query: 34 QRFF--LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLP 91 Q FF +A++ + + +LG F V L + F PRPETE L++ A A LP Sbjct: 56 QEFFQRYRDAVLARARRVPLQHLLGTAAFGPVLLHVGPGVFVPRPETEALLEWATAQQLP 115 Query: 92 RIEKRDVVRILDLGTGTGAVCLALLKESPF----FKGVGVDISCKALEIAKSNAVTNGVS 147 R V I+DL TG+GA+ +AL + VGVD S ALE A+ NA V Sbjct: 116 ---PRPV--IVDLCTGSGALAVALAHHRAGRGLPARIVGVDNSDAALEYARRNAAGTTVE 170 Query: 148 -ERFDTLQ----SDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202 R D ++ ++G D++V+NPPY+ V L EV DP ++ GG DG Sbjct: 171 LVRADVIELARVPGSAPDLDGRVDLVVANPPYVPDGAV--LEPEVAQHDPHHAVFGGPDG 228 Query: 203 LSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF-LVNAFKDYGGNDRVLL 261 L+ + + R L GL +E V +F+ LF V A +D G R + Sbjct: 229 LAVIAPVVELAGRWLRPGGLIGIEHDDTTSHQTVELFDRTGLFDDVRAHRDLTGRPRFVT 288 Query: 262 FCR 264 R Sbjct: 289 ARR 291 >gi|221066928|ref|ZP_03543033.1| modification methylase, HemK family [Comamonas testosteroni KF-1] gi|220711951|gb|EED67319.1| modification methylase, HemK family [Comamonas testosteroni KF-1] Length = 312 Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 56/168 (33%), Positives = 92/168 (54%), Gaps = 7/168 (4%) Query: 98 VVRILDLGTGTGAV-CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 V++LDL TG G++ CLA + P + G DIS AL +A+ N +G+ +R L+S+ Sbjct: 138 TVQVLDLCTGNGSLACLAAMA-YPEVRVTGADISTDALAVARINVDKHGLQDRVTLLESN 196 Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216 S V G +D+++ NPPY+ S + L E + +P ++L GG DG+ R + + + Sbjct: 197 GMSQVPGPWDLVLCNPPYVNSDSMGKLPAEYQ-AEPELALAGGTDGMDFIRQLLEDLPAR 255 Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 LNKD + +EIG N+K F +F ++ G+++VLL Sbjct: 256 LNKDAVVVLEIG-NEKPYFEAAFPDLPVFWLDTSS---GDEQVLLITE 299 >gi|166710769|ref|ZP_02241976.1| protoporphyrinogen oxidase [Xanthomonas oryzae pv. oryzicola BLS256] Length = 281 Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 70/222 (31%), Positives = 101/222 (45%), Gaps = 9/222 (4%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101 + R E + + G R F+ + L +S T PR +TELLV+ +L R + R Sbjct: 61 VQRREAGEPVAYLTGSRGFWTLDLAVSPATLIPRADTELLVE----LALERFDTSPGRRA 116 Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 DLGTG+GA+ LA+ E P + V + A N D +WF+ + Sbjct: 117 ADLGTGSGAIALAIASERPQAQ-VIATDASAAALALARRNAHNHALRNVDFRLGNWFAPL 175 Query: 162 EG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220 G FD+I SNPPYI + ++R ++P +L G DGL R I HL Sbjct: 176 AGEAFDLIASNPPYIAAHDPHLQQGDLR-YEPATALASGSDGLDDIRLIVADAPTHLLPG 234 Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNA-FKDYGGNDRVLL 261 G +E G++Q D VR + F A ++D DRV L Sbjct: 235 GWLLLEHGWDQG-DAVRALLAASGFDAAATYQDLEARDRVTL 275 >gi|115489544|ref|NP_001067259.1| Os12g0612500 [Oryza sativa Japonica Group] gi|77556587|gb|ABA99383.1| modification methylase, HemK family protein, expressed [Oryza sativa Japonica Group] gi|113649766|dbj|BAF30278.1| Os12g0612500 [Oryza sativa Japonica Group] Length = 353 Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 54/180 (30%), Positives = 91/180 (50%), Gaps = 12/180 (6%) Query: 57 WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116 WRD + + PRPETE +VD + +++ + DLGTG+GA+ +A+ Sbjct: 145 WRDLV---VAVREGVLIPRPETEAVVDM-----VAKVQGFEAGWWADLGTGSGAIAVAVA 196 Query: 117 KE-SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNP 172 + P + D+S A+++A+ N G+ ++ + WF +E G ++SNP Sbjct: 197 RMLGPEGRVFATDVSEVAIDVARLNVQRYGMQDKVEIRHGSWFEPLEDLKGKLMGVISNP 256 Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232 PYI + + L EV +P+++LDGG DGL H + +G+S L G E N++ Sbjct: 257 PYIPTEDLPGLQPEVGWHEPKLALDGGKDGLEHLLHLCEGLSSVLKPGGFFVFETNGNKQ 316 >gi|326506000|dbj|BAJ91239.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 361 Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 58/174 (33%), Positives = 90/174 (51%), Gaps = 9/174 (5%) Query: 74 PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE-SPFFKGVGVDISCK 132 PRPETE +VD A +E DLGTG+GA+ +A+ + P + D+S Sbjct: 167 PRPETEAVVDMVGA-----VEGFQDGWWADLGTGSGAIAVAVARMLGPAGRVFATDVSEV 221 Query: 133 ALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVIVDCLGLEVRD 189 A+E+A+ N GV ++ + + WF +E G ++SNPPYI + + L EV Sbjct: 222 AVEVARLNVHRYGVQDKVEIRRGSWFEPLEDVKGKLMGVISNPPYIPTDDLPGLQPEVGW 281 Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 +P+++LDGG DGL H + +G+S L G E N++ + + F S K Sbjct: 282 HEPKLALDGGKDGLDHLLHLCEGLSSALMPGGFFVFETNGNKQSEFLVDFISTK 335 >gi|253996070|ref|YP_003048134.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Methylotenera mobilis JLW8] gi|253982749|gb|ACT47607.1| modification methylase, HemK family [Methylotenera mobilis JLW8] Length = 303 Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 53/156 (33%), Positives = 90/156 (57%), Gaps = 6/156 (3%) Query: 78 TELLVDSALAFSLPRIEKRDVVR-ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136 ELLV+ LA P IE +++ D+ TG+G + + L P +DIS A+++ Sbjct: 115 AELLVNDGLA---PWIEFPELINNAADICTGSGCLGVLLADAYPDAAVDVIDISQDAIDV 171 Query: 137 AKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195 N G+ +R ++SD FS ++G +D+I+SNPPY+++ + L E R+ +P+++ Sbjct: 172 CNININAYGLQDRITAIKSDMFSQLKGKQYDLIISNPPYVDAPSMAVLPAEYRN-EPQLA 230 Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231 L G+ GL H TI + +L +DG+ VEIG+N+ Sbjct: 231 LGSGVAGLDHTHTILHEAANYLTEDGVLVVEIGHNR 266 >gi|258626138|ref|ZP_05720986.1| Protein hemK [Vibrio mimicus VM603] gi|258581493|gb|EEW06394.1| Protein hemK [Vibrio mimicus VM603] Length = 177 Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 53/156 (33%), Positives = 80/156 (51%), Gaps = 15/156 (9%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ LC V ++ PD L+ L + R + E + ILG R+F+++ L Sbjct: 27 DAAVLLCHVLAKPRSYLLTWPDKTLEKPALVSLNALLTRRMAGEPVAYILGEREFWSLPL 86 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV--RILDLGTGTGAVCLALLKESPFFK 123 +S T PRP+TE LV+ AL EK ++ +LDLGTGTGA+ LAL E P + Sbjct: 87 KVSPSTLIPRPDTERLVELAL-------EKAALIEGELLDLGTGTGAIALALASELPLRR 139 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 G+D+ +A E+A+ NA R L + +F+ Sbjct: 140 VTGIDLRPEAAELAQENAT------RLSILNTQFFA 169 >gi|195953186|ref|YP_002121476.1| cyclic nucleotide-binding protein [Hydrogenobaculum sp. Y04AAS1] gi|195932798|gb|ACG57498.1| cyclic nucleotide-binding protein [Hydrogenobaculum sp. Y04AAS1] Length = 258 Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 68/264 (25%), Positives = 127/264 (48%), Gaps = 29/264 (10%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKH-ESIHRILGWRDFY 61 +LRD+ L V+GL + + ++ D++ ++ +I+ ++ + +G F+ Sbjct: 13 SLRDTLLVLEHVSGLDKNYIFLNQDNIELNQDVLEAFKSILSKIQSGMPLQYAIGKWWFF 72 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLG----TGTGAVCLALLK 117 + PRPETE++V+ A+ F+ + +G G+G + + LLK Sbjct: 73 GEEFIIEPPVLIPRPETEIVVEEAMKFA----------KQFKIGFEPFVGSGIISIVLLK 122 Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIE 176 +P K V DI+ KA E+A NA + V +R + SD +++ D +V+NPPYI Sbjct: 123 HNPHLKMVATDINKKACELALKNAKLHKVEDRLLVVCSDVAKAIKIEKVDFLVANPPYIP 182 Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIAD-GVSRHLNKDGLCSVEIGYNQKVDV 235 + +++ L V +++ +LDG +GL Y+ + G+ + +EIG++Q+ + Sbjct: 183 TNVLNTLEKSVLEYEDIKALDGKEEGLFFYKKLKSLGIKPMI-------LEIGHDQEQAL 235 Query: 236 VRIFESRKLFLVNAFKDYGGNDRV 259 +F V DY N RV Sbjct: 236 KDLFGD-----VEIIYDYSNNPRV 254 >gi|311107250|ref|YP_003980103.1| methyltransferase [Achromobacter xylosoxidans A8] gi|310761939|gb|ADP17388.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Achromobacter xylosoxidans A8] Length = 298 Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 58/162 (35%), Positives = 89/162 (54%), Gaps = 10/162 (6%) Query: 74 PRPETELLVDSALAFSLPRIEKRDVVR-ILDLGTGTGAVCLALLKES--PFFKGVGVDIS 130 PR L+D LA P ++ V +LD+ TG+G CLA+L P+ VD+S Sbjct: 109 PRSPIAELLDQGLA---PWVQDALAVENVLDMCTGSG--CLAILSALAFPYAHVDAVDVS 163 Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRD 189 ALE+A+ N G+++R D S+ F ++ +DVI+ NPPY+ S +D L E R Sbjct: 164 PDALEVARRNVDDYGLADRLDLHASNLFDNLPPRQYDVIICNPPYVNSGSMDALPQEYR- 222 Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231 +P+++L GG DG+ R I D R L +G+ +EIG+ + Sbjct: 223 HEPQLALAGGDDGMDLVRRILDAAPRFLTPEGVLVLEIGHER 264 >gi|294789325|ref|ZP_06754563.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Simonsiella muelleri ATCC 29453] gi|294482750|gb|EFG30439.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Simonsiella muelleri ATCC 29453] Length = 329 Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 51/144 (35%), Positives = 80/144 (55%), Gaps = 2/144 (1%) Query: 91 PRIEKRDVVR-ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 P IE +++ LDL TG+G + + + P + VDIS ALE+A N G+ +R Sbjct: 143 PWIEYDELIHHALDLCTGSGTLAIQMAHYYPDAQIDAVDISLDALEVASINIDDYGLRQR 202 Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209 + +D F +E +D+I+SNPPY++ V L E +P ++L G DGL R I Sbjct: 203 IQLIHADLFDGLENTYDLIISNPPYVDEESVKNLPDEYL-HEPTLALGSGKDGLDITRKI 261 Query: 210 ADGVSRHLNKDGLCSVEIGYNQKV 233 + ++ LN +G+ VEIG+N+ V Sbjct: 262 INQAAQFLNPNGVLLVEIGHNRDV 285 >gi|229816318|ref|ZP_04446625.1| hypothetical protein COLINT_03368 [Collinsella intestinalis DSM 13280] gi|229808074|gb|EEP43869.1| hypothetical protein COLINT_03368 [Collinsella intestinalis DSM 13280] Length = 389 Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 58/171 (33%), Positives = 90/171 (52%), Gaps = 9/171 (5%) Query: 99 VRILDLGTGTGAVCLALLKE-SPFFKGVGVDISCKALEIAKSNAVTNGVSE-----RFDT 152 R+L++G GTG + L++ E S + V +DI +A++++ N G+S R Sbjct: 216 ARVLEVGCGTGCISLSIASERSGRAQCVAIDIEPRAVDLSIRNRDALGISPADVDVRLGN 275 Query: 153 LQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIAD 211 L S E G FDV+VSNPPYI S +++ L EV DF+P ++LDGG DGL +R + + Sbjct: 276 LVSPLNRETEWGTFDVLVSNPPYIPSAVMESLPHEVADFEPALALDGGADGLDIFRRLVN 335 Query: 212 GVSRHLNKDGLCSVEIGYNQKVDVVR-IFESRKLFLVNAFKDYGGNDRVLL 261 L GL + E+ Y +D + S + V D+ G R++L Sbjct: 336 AAPHMLRPGGLLACEL-YEGHLDAAADLCRSAGMHDVRIVDDFTGRPRIVL 385 Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 27/79 (34%), Positives = 40/79 (50%) Query: 10 FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69 L VTGLS ++ V+ D + + + A+VR K E + I+G F + + Sbjct: 34 LLSGVTGLSRTEIYVNFDKPMSSEELAAMHTAVVRRAKGEPLQYIIGETSFRTIDVMCEP 93 Query: 70 DTFEPRPETELLVDSALAF 88 PRPETELLV+ LA+ Sbjct: 94 GVLIPRPETELLVEEVLAY 112 >gi|240169514|ref|ZP_04748173.1| modification methylase HemK [Mycobacterium kansasii ATCC 12478] Length = 282 Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 71/217 (32%), Positives = 105/217 (48%), Gaps = 11/217 (5%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110 + + G F V L + F PRPETE L++ A A LP +R V I+DL TG+GA Sbjct: 70 LQHLTGTVSFGPVELRVGPGVFIPRPETEALLEWATAQPLP---QRAV--IVDLCTGSGA 124 Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEGLFDVIV 169 + +AL + P + +G+D S ALE A+ NA + V R D ++ D+++ Sbjct: 125 LAVALARHRPAARIIGLDDSEAALEYARRNAEGSNVELIRADVTTLGLRPDLDRRVDLVI 184 Query: 170 SNPPYI-ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228 +NPPY+ ++ V+ EV DPR ++ GG DG++ + R L GL +VE Sbjct: 185 ANPPYVPDNATVEP---EVAQHDPRHAVFGGPDGMAVIAHVVRLAGRWLRPGGLLAVEHD 241 Query: 229 YNQKVDVVRIFESRKLF-LVNAFKDYGGNDRVLLFCR 264 V S LF + A KD G R + R Sbjct: 242 DTTSGLTVEFISSTGLFETIVARKDLAGRPRFVTAGR 278 >gi|237750574|ref|ZP_04581054.1| protoporphyrinogen oxidase [Helicobacter bilis ATCC 43879] gi|229373664|gb|EEO24055.1| protoporphyrinogen oxidase [Helicobacter bilis ATCC 43879] Length = 274 Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 72/237 (30%), Positives = 115/237 (48%), Gaps = 28/237 (11%) Query: 32 DRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLP 91 D+QR+F A+ ++ + + FY++ L + + PR ETELLV+ AL Sbjct: 48 DKQRYFKILAMRKN--GVPLEYLTNKASFYDLELYVDNKVLIPRHETELLVEHALEI--- 102 Query: 92 RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151 I+ ++ +++G G+GA+ A+L + + DIS +AL IAK N G+ R D Sbjct: 103 -IKAHNITHFVEVGVGSGAISAAILTHAKETCAIATDISKEALNIAKHNIQNLGLENRCD 161 Query: 152 TLQSDWFSS----VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207 ++SD SS + ++V+NPPYI + L EV +P I+L GG G + Sbjct: 162 FVESDLLSSPYLIMRKPITLLVANPPYIANSY--PLNQEVL-CEPHIALFGGEKGDEILK 218 Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA------FKDYGGNDR 258 + + +C E+GY+QK ES + L+N +KDY G DR Sbjct: 219 KLILQAREKQIQFLIC--EMGYDQK-------ESMQEILLNVGYKPTFYKDYAGFDR 266 >gi|223995553|ref|XP_002287450.1| hemk-like sam-dependent methylase protein [Thalassiosira pseudonana CCMP1335] gi|220976566|gb|EED94893.1| hemk-like sam-dependent methylase protein [Thalassiosira pseudonana CCMP1335] Length = 294 Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 68/202 (33%), Positives = 105/202 (51%), Gaps = 13/202 (6%) Query: 30 LDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR-LTLSSDTFEPRPETELLVDSALAF 88 L D Q ++ I R K+E I I+G DF+ + L++ PRPETE LV+ LA Sbjct: 39 LTDEQTTLYSSFIERRKKYEPIQYIIGKWDFHQLSGLSIRRPMLCPRPETEELVEILLAE 98 Query: 89 SLPRIEKRDV--------VRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKS 139 I KR +RILD+G GTGA+ +A+ + P V +D+ +A+E++ Sbjct: 99 IEELIHKRGKKDKGSNGRIRILDVGAGTGAIGIAIAHQLPHHVQVLALDVLPEAVELSNE 158 Query: 140 NAVTNGVSERFDTLQSDWFSSVEGL--FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197 NA +S+ D+ D SS + FD++VSNPPYI S + L ++ D++ +L Sbjct: 159 NA-QQFLSKLVDSDVGDVSSSQQYPMNFDLVVSNPPYIPSSDMPSLSTDILDYESVEALC 217 Query: 198 GGIDGLSHYRTIADGVSRHLNK 219 GG DGL R I + + + + Sbjct: 218 GGDDGLDVIRDIVQRLPKWMPR 239 >gi|302783851|ref|XP_002973698.1| hypothetical protein SELMODRAFT_99812 [Selaginella moellendorffii] gi|300158736|gb|EFJ25358.1| hypothetical protein SELMODRAFT_99812 [Selaginella moellendorffii] Length = 336 Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 65/205 (31%), Positives = 93/205 (45%), Gaps = 15/205 (7%) Query: 57 WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116 WRD L + PRPETE L+D A A E V + DLGTG+GA+ + + Sbjct: 127 WRDLV---LGVQEGVLIPRPETEQLIDLAAAAMDGNSELARGVWV-DLGTGSGAIAIGMA 182 Query: 117 KESPFFKGVG----VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIV 169 + G G VD S A+ +A++NA + + ++ W + + G IV Sbjct: 183 R---LLDGRGSVIAVDASEVAIAVAEANARRYKLQDAVTLVKGSWLTPLRDEAGKLSGIV 239 Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI-G 228 SNPPYI S + L EV +P +LDGG DG+ H I G L G ++E G Sbjct: 240 SNPPYIPSRNLGRLQAEVGKHEPMCALDGGDDGIDHLAEICQGACWALKSGGFLALETDG 299 Query: 229 YNQKVDVVRIFESRKLFLVNAFKDY 253 Q V +I + + KD+ Sbjct: 300 GEQAQTVAKILSDKPFEDIKVVKDF 324 >gi|258422883|ref|ZP_05685783.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Staphylococcus aureus A9635] gi|257846907|gb|EEV70921.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Staphylococcus aureus A9635] Length = 278 Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 69/233 (29%), Positives = 114/233 (48%), Gaps = 26/233 (11%) Query: 41 AIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR 100 A+ R L E + I+G+ FY ++++ PRPETE + L F L ++E D Sbjct: 59 ALQRMLLGEPVQYIVGFASFYGRTFEVNTNCLIPRPETE---EVMLHF-LQQLE--DDAT 112 Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 I+D+GTG+G + + L E P + DIS +A+ +A++NA + +F L D Sbjct: 113 IVDIGTGSGVLAITLKCEKPDLNVIATDISLEAMNMARNNAEKHQSQIQF--LTGDALKP 170 Query: 161 V--EGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217 + EG+ + ++SNPPYI+ + + V F+P +L G + Y +I + + + Sbjct: 171 LIKEGIKLNGLISNPPYIDEKDMVTMSPTVTRFEPHQALFADNHGYAIYESIIEDLPHVM 230 Query: 218 NKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK--------DYGGNDRVLLF 262 K EIGYNQ E+ K ++N F D G+DR++ F Sbjct: 231 QKGSPVVFEIGYNQG-------EALKSIILNKFPDKKIDIIKDINGHDRIVSF 276 >gi|255326262|ref|ZP_05367348.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Rothia mucilaginosa ATCC 25296] gi|255296716|gb|EET76047.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Rothia mucilaginosa ATCC 25296] Length = 302 Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 60/174 (34%), Positives = 84/174 (48%), Gaps = 10/174 (5%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD-VVR 100 + R E + I G FY + L + F PRPETELLV+ AL PR +R Sbjct: 72 VARRACREPLQHITGSAPFYRLELAVGPGVFVPRPETELLVEEALKVLAPRTNSATGQLR 131 Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 I+DL TG+GA+ A+ E P + V++S A+ + N GV +Q D ++ Sbjct: 132 IVDLCTGSGAIAAAIKSELPNAQVFAVELSEDAIPYTRKNLEPLGVH----LVQGDALTA 187 Query: 161 VE---GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL-DGGIDGLSHYRTIA 210 + G FD ++SNPPYI V E DP ++L GG DG+ IA Sbjct: 188 LPELAGTFDAVLSNPPYIPPANVPA-DPEAALHDPDMALYGGGEDGMQMPSAIA 240 >gi|110834335|ref|YP_693194.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Alcanivorax borkumensis SK2] gi|110647446|emb|CAL16922.1| site-specific DNA-methyltransferase [Alcanivorax borkumensis SK2] Length = 306 Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 52/155 (33%), Positives = 84/155 (54%), Gaps = 4/155 (2%) Query: 74 PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133 PR L++ + A P ++ V R+LDL TG+G + +A + G DI A Sbjct: 114 PRSPLAELIEQSFA---PWVDPEQVHRVLDLCTGSGCIAIACAYAFEHARVDGSDICADA 170 Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPR 193 L + K N +G+ E+ LQSD ++V+G +D+IVSNPPY+++ + L E R +P Sbjct: 171 LAVCKENIERHGLGEQVRALQSDGLAAVDGPYDLIVSNPPYVDAQDMASLPDEYR-HEPE 229 Query: 194 ISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228 ++L G DGL R + L+++G+ VE+G Sbjct: 230 LALASGNDGLDFTRRLLLDAPDQLSEEGVLIVEVG 264 >gi|125580052|gb|EAZ21198.1| hypothetical protein OsJ_36848 [Oryza sativa Japonica Group] Length = 335 Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 54/177 (30%), Positives = 91/177 (51%), Gaps = 9/177 (5%) Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE-SP 120 +VR S PRPETE +VD + +++ + DLGTG+GA+ +A+ + P Sbjct: 129 HVRDRRRSSVLIPRPETEAVVDM-----VAKVQGFEAGWWADLGTGSGAIAVAVARMLGP 183 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIES 177 + D+S A+++A+ N G+ ++ + WF +E G ++SNPPYI + Sbjct: 184 EGRVFATDVSEVAIDVARLNVQRYGMQDKVEIRHGSWFEPLEDLKGKLMGVISNPPYIPT 243 Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234 + L EV +P+++LDGG DGL H + +G+S L G E N++ + Sbjct: 244 EDLPGLQPEVGWHEPKLALDGGKDGLEHLLHLCEGLSSVLKPGGFFVFETNGNKQSE 300 >gi|91787869|ref|YP_548821.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Polaromonas sp. JS666] gi|91697094|gb|ABE43923.1| [LSU ribosomal protein L3P]-glutamine N5-methyltransferase [Polaromonas sp. JS666] Length = 296 Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 54/187 (28%), Positives = 102/187 (54%), Gaps = 9/187 (4%) Query: 78 TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137 ELLVD+++ P +++ + R+LDL TG G++ + P DIS AL +A Sbjct: 115 AELLVDASID---PWLDE-NTRRVLDLCTGNGSLAVLAAMTYPEVTVDAADISPDALAVA 170 Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197 + N + + +R ++SD ++ G +D+I+ NPPY+ + + L E R +P ++L Sbjct: 171 RINVDRHQLQQRITLIESDGLAACPGPYDLILCNPPYVNAASMAALPAEFRA-EPGLALA 229 Query: 198 GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGND 257 GG DG+ R++ +RH++++ + +EIG N++ + R F + F+ G+D Sbjct: 230 GGADGMDFIRSLFLNAARHMSENAVLVLEIG-NERGNFERAFPHLEPLW---FETSAGSD 285 Query: 258 RVLLFCR 264 +V++ R Sbjct: 286 QVMILTR 292 >gi|329912958|ref|ZP_08275852.1| Hypothetical adenine-specific methylase yfcB [Oxalobacteraceae bacterium IMCC9480] gi|327545480|gb|EGF30683.1| Hypothetical adenine-specific methylase yfcB [Oxalobacteraceae bacterium IMCC9480] Length = 292 Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 55/169 (32%), Positives = 89/169 (52%), Gaps = 6/169 (3%) Query: 94 EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153 + V+ IL+L TG+G + + L P +DIS AL +A+ N + +R + Sbjct: 123 DAESVLNILELCTGSGCLAIMLADAFPNAHVDAIDISADALAVARRNVDDYELQDRITLI 182 Query: 154 QSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212 +S+ +++V + +D+I+SNPPY+ S +D L E + +PRI+L GG DG+ R I G Sbjct: 183 ESNLYAAVPDKKYDLIISNPPYVNSASMDKLPKEYQ-IEPRIALAGGTDGMDLVRNIVAG 241 Query: 213 VSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 L + GL VEIG N++ F + +L + G+D V L Sbjct: 242 ARERLTRGGLLVVEIG-NERAHAELAFPTLELTWMTT---SAGDDMVFL 286 >gi|221134758|ref|ZP_03561061.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Glaciecola sp. HTCC2999] Length = 311 Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 51/129 (39%), Positives = 77/129 (59%), Gaps = 2/129 (1%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 I+DL TG G + +AL + P + +DIS ALE+A N +G++ER +QSD FS Sbjct: 142 IMDLCTGGGCIAIALAHQFPHAQVDALDISEDALEVASLNIDEHGLTERVYPVQSDVFSG 201 Query: 161 VEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 V G +D+IVSNPPY+++ + L E +P ++L G DGL +TI + +HL+ Sbjct: 202 VMGQTYDLIVSNPPYVDAEDMSDLPQEFL-HEPSLALAAGHDGLDIVQTILEQAPQHLSP 260 Query: 220 DGLCSVEIG 228 +G VE+G Sbjct: 261 EGWLFVEVG 269 >gi|205375315|ref|ZP_03228105.1| HemK family modification methylase [Bacillus coahuilensis m4-4] Length = 285 Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 70/266 (26%), Positives = 119/266 (44%), Gaps = 20/266 (7%) Query: 10 FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69 +L + S +++ + +LD+ R + + I I+G+ +FY ++ Sbjct: 27 YLQHLLDWSRSKLLAEQQLLLDESIRELFVKGVKDHVSGIPIQHIIGYEEFYGRCYKVNR 86 Query: 70 DTFEPRPETELLVDSALAFSLPRIEKRDVVRIL-DLGTGTGAVCLALLKESPFFKGVGVD 128 PRPETE LV L + L D+GTG+GA+ +++ E P + D Sbjct: 87 HVLIPRPETEELVYHTLEKISDLFKATGTALTLADIGTGSGAIAISMKLERPTLQVYASD 146 Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGL-FDVIVSNPPYIESVIVDCLGL 185 + +AL++AK NA G F Q + + G+ DV++SNPPYI + + Sbjct: 147 LHEEALQVAKENADRLGAEVHFT--QGNLLHPIMERGVKLDVMLSNPPYIPEGDKEWMSE 204 Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE----- 240 V + +P +L G DG+ YR + + +N GL E+G Q V + + Sbjct: 205 VVTEHEPHSALFAGADGMVLYRQFMEELPLVMNSPGLIGFEVGTGQGEAVRDLLQQTFPS 264 Query: 241 --SRKLFLVNAFKDYGGNDRVLLFCR 264 S+ +F +N G DR ++FC Sbjct: 265 ARSKVVFDIN------GKDR-MVFCE 283 >gi|88855315|ref|ZP_01129979.1| methyltransferase [marine actinobacterium PHSC20C1] gi|88815222|gb|EAR25080.1| methyltransferase [marine actinobacterium PHSC20C1] Length = 290 Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 66/223 (29%), Positives = 101/223 (45%), Gaps = 13/223 (5%) Query: 43 VRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL----AFSLPRIEKRDV 98 R E + I G F N+ L + F PRPETE +V A+ A + P Sbjct: 70 ARRAAREPLQHITGVAPFRNLELRVGPGVFVPRPETETVVQFAIDALNASATPEPIG--- 126 Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV--SERFDTLQSD 156 +DLGTG+GA+ L++ E P V++S A+ N G + + D Sbjct: 127 ---VDLGTGSGAIALSMATEVPRSHIYAVELSPDAMPYTSENFRRYGADNATLINADLGD 183 Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216 F+ ++G DV++SNPPYI + + +EV+ DP ++L GG DG+ R ++ R Sbjct: 184 AFTELDGTVDVVISNPPYIPAAAI-PRDIEVQLHDPALALYGGEDGMDVVRRVSLTAKRL 242 Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRV 259 L+ G +E G Q + + + V KD G DR Sbjct: 243 LHPGGTLVLEHGEEQAPALAALLTADGWNAVAHHKDLLGRDRA 285 >gi|312830469|emb|CBX35311.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Staphylococcus aureus subsp. aureus ECT-R 2] gi|329726314|gb|EGG62782.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Staphylococcus aureus subsp. aureus 21172] Length = 277 Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 71/233 (30%), Positives = 113/233 (48%), Gaps = 26/233 (11%) Query: 41 AIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR 100 A+ R L E I I+G+ FY ++S+ PRPETE + L F L ++E D Sbjct: 58 ALQRMLLGEPIQYIVGFASFYGRTFDVNSNCLIPRPETE---EVMLHF-LQQLE--DDAT 111 Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 I+D+GTG+G + + L E P + DIS +A+ +A++NA + +F L D Sbjct: 112 IVDIGTGSGVLAITLKCEKPDLNVIATDISLEAMNMARNNAEKHQSQIQF--LTGDALKP 169 Query: 161 V--EGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217 + EG+ + ++SNPPYI+ + + V F+P +L G + Y +I + + Sbjct: 170 LIKEGIKLNGLISNPPYIDEKDMVTMSPTVTRFEPHQALFADNHGYAIYESIIGDLPHVM 229 Query: 218 NKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK--------DYGGNDRVLLF 262 K EIGYNQ E+ K ++N F D G+DR++ F Sbjct: 230 EKGSPVVFEIGYNQG-------EALKSIILNKFPDKKIDIIKDINGHDRIVSF 275 >gi|15925107|ref|NP_372641.1| protoporphyrinogen oxidase [Staphylococcus aureus subsp. aureus Mu50] gi|15927691|ref|NP_375224.1| hypothetical protein SA1919 [Staphylococcus aureus subsp. aureus N315] gi|148268568|ref|YP_001247511.1| HemK family modification methylase [Staphylococcus aureus subsp. aureus JH9] gi|150394632|ref|YP_001317307.1| HemK family modification methylase [Staphylococcus aureus subsp. aureus JH1] gi|156980432|ref|YP_001442691.1| hypothetical protein SAHV_2101 [Staphylococcus aureus subsp. aureus Mu3] gi|253315786|ref|ZP_04838999.1| hypothetical protein SauraC_06505 [Staphylococcus aureus subsp. aureus str. CF-Marseille] gi|255006905|ref|ZP_05145506.2| hypothetical protein SauraM_10565 [Staphylococcus aureus subsp. aureus Mu50-omega] gi|257793875|ref|ZP_05642854.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Staphylococcus aureus A9781] gi|258407043|ref|ZP_05680193.1| modification methylase [Staphylococcus aureus A9763] gi|258422065|ref|ZP_05684982.1| HemK family modification methylase [Staphylococcus aureus A9719] gi|258433566|ref|ZP_05688639.1| protoporphyrinogen oxidase [Staphylococcus aureus A9299] gi|258440461|ref|ZP_05690631.1| protoporphyrinogen oxidase [Staphylococcus aureus A8115] gi|258445669|ref|ZP_05693847.1| HemK family modification methylase [Staphylococcus aureus A6300] gi|258450123|ref|ZP_05698218.1| protoporphyrinogen oxidase [Staphylococcus aureus A6224] gi|258453422|ref|ZP_05701404.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Staphylococcus aureus A5937] gi|269203753|ref|YP_003283022.1| HemK family modification methylase [Staphylococcus aureus subsp. aureus ED98] gi|282894761|ref|ZP_06302987.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Staphylococcus aureus A8117] gi|282929041|ref|ZP_06336626.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Staphylococcus aureus A10102] gi|295407047|ref|ZP_06816849.1| protein-(glutamine-N5) methyltransferase [Staphylococcus aureus A8819] gi|296275404|ref|ZP_06857911.1| HemK family modification methylase [Staphylococcus aureus subsp. aureus MR1] gi|297246046|ref|ZP_06929903.1| protein-(glutamine-N5) methyltransferase [Staphylococcus aureus A8796] gi|13701911|dbj|BAB43203.1| SA1919 [Staphylococcus aureus subsp. aureus N315] gi|14247890|dbj|BAB58279.1| similar to protoporphyrinogen oxidase [Staphylococcus aureus subsp. aureus Mu50] gi|147741637|gb|ABQ49935.1| modification methylase, HemK family [Staphylococcus aureus subsp. aureus JH9] gi|149947084|gb|ABR53020.1| modification methylase, HemK family [Staphylococcus aureus subsp. aureus JH1] gi|156722567|dbj|BAF78984.1| hypothetical protein [Staphylococcus aureus subsp. aureus Mu3] gi|257787847|gb|EEV26187.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Staphylococcus aureus A9781] gi|257841376|gb|EEV65820.1| modification methylase [Staphylococcus aureus A9763] gi|257841965|gb|EEV66397.1| HemK family modification methylase [Staphylococcus aureus A9719] gi|257849297|gb|EEV73276.1| protoporphyrinogen oxidase [Staphylococcus aureus A9299] gi|257852530|gb|EEV76448.1| protoporphyrinogen oxidase [Staphylococcus aureus A8115] gi|257855508|gb|EEV78445.1| HemK family modification methylase [Staphylococcus aureus A6300] gi|257856597|gb|EEV79503.1| protoporphyrinogen oxidase [Staphylococcus aureus A6224] gi|257864403|gb|EEV87149.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Staphylococcus aureus A5937] gi|262076043|gb|ACY12016.1| HemK family modification methylase [Staphylococcus aureus subsp. aureus ED98] gi|282589347|gb|EFB94439.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Staphylococcus aureus A10102] gi|282762849|gb|EFC02983.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Staphylococcus aureus A8117] gi|285817781|gb|ADC38268.1| Methylase of polypeptide chain release factors [Staphylococcus aureus 04-02981] gi|294968072|gb|EFG44099.1| protein-(glutamine-N5) methyltransferase [Staphylococcus aureus A8819] gi|297177045|gb|EFH36300.1| protein-(glutamine-N5) methyltransferase [Staphylococcus aureus A8796] gi|315128788|gb|EFT84788.1| hypothetical protein CGSSa03_07701 [Staphylococcus aureus subsp. aureus CGS03] Length = 278 Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 71/233 (30%), Positives = 113/233 (48%), Gaps = 26/233 (11%) Query: 41 AIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR 100 A+ R L E I I+G+ FY ++S+ PRPETE + L F L ++E D Sbjct: 59 ALQRMLLGEPIQYIVGFASFYGRTFDVNSNCLIPRPETE---EVMLHF-LQQLE--DDAT 112 Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 I+D+GTG+G + + L E P + DIS +A+ +A++NA + +F L D Sbjct: 113 IVDIGTGSGVLAITLKCEKPDLNVIATDISLEAMNMARNNAEKHQSQIQF--LTGDALKP 170 Query: 161 V--EGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217 + EG+ + ++SNPPYI+ + + V F+P +L G + Y +I + + Sbjct: 171 LIKEGIKLNGLISNPPYIDEKDMVTMSPTVTRFEPHQALFADNHGYAIYESIIGDLPHVM 230 Query: 218 NKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK--------DYGGNDRVLLF 262 K EIGYNQ E+ K ++N F D G+DR++ F Sbjct: 231 EKGSPVVFEIGYNQG-------EALKSIILNKFPDKKIDIIKDINGHDRIVSF 276 >gi|312879995|ref|ZP_07739795.1| modification methylase, HemK family [Aminomonas paucivorans DSM 12260] gi|310783286|gb|EFQ23684.1| modification methylase, HemK family [Aminomonas paucivorans DSM 12260] Length = 291 Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 72/268 (26%), Positives = 115/268 (42%), Gaps = 13/268 (4%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 + L ++ FL + TG + + +V P+ + + R + R L E + ILG F Sbjct: 21 RPLWEAELFLEKATGWTRREQLVFPEREVFETPRDTAEALVRRRLAGEPLDYILGEAPFG 80 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 + PRPE+E+LV A+ LPR LD G G+G + ++ E P Sbjct: 81 AWAFAVGPGCLIPRPESEVLVREAVG-RLPRGGN-----FLDWGAGSGCLACSVALERPD 134 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-----GLFDVIVSNPPYIE 176 +G ++ S AL A N +G+ +R S +E F +++NPPYI Sbjct: 135 LRGCALEASPAALRWAWENLRRHGLRDRVLLWHGR--SPMELPPWTAPFHGVLANPPYIP 192 Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236 + L VRD +PR +LDGG GL + + L G E ++D++ Sbjct: 193 TEHWIALDPSVRDQEPRCALDGGDRGLEPLLSWLALLPPFLEPGGWILAETAGPWQIDLL 252 Query: 237 RIFESRKLFLVNAFKDYGGNDRVLLFCR 264 + L L +D G R +L+ R Sbjct: 253 QEHRPEGLCLEEVLEDPFGVPRFVLWRR 280 >gi|255566573|ref|XP_002524271.1| n6-DNA-methyltransferase, putative [Ricinus communis] gi|223536462|gb|EEF38110.1| n6-DNA-methyltransferase, putative [Ricinus communis] Length = 354 Score = 85.9 bits (211), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 69/212 (32%), Positives = 98/212 (46%), Gaps = 12/212 (5%) Query: 57 WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116 WRDF L++ PRPETEL++D L E + + DLGTG+GA+ + + Sbjct: 142 WRDFV---LSVQEGVLIPRPETELIIDLVKGAVLNNEELSEGLWA-DLGTGSGALAIGIA 197 Query: 117 K-ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF---SSVEGLFDVIVSNP 172 K P + + D+S A +A N + + + WF + VEG +VSNP Sbjct: 198 KILGPQGRVIATDLSPVAASVATYNVQRYDLQGMVEVRKGSWFEPLNDVEGKLAGVVSNP 257 Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI-GYNQ 231 PYI S + L EV +PRI+LDGGI G+ + +G + L G + E G Q Sbjct: 258 PYIPSDDISGLQAEVGRHEPRIALDGGISGMDDLLHLTNGAASILKPGGFFAFETNGEKQ 317 Query: 232 KVDVVRIFE---SRKLFLVNAFKDYGGNDRVL 260 ++ E S F VN D G R L Sbjct: 318 CKFLLHHMENECSGCFFNVNIVSDCAGIQRFL 349 >gi|219126337|ref|XP_002183416.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217405172|gb|EEC45116.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 424 Score = 85.9 bits (211), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 68/231 (29%), Positives = 108/231 (46%), Gaps = 14/231 (6%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVD----SALAFSLPRIEKRD 97 +VR E I + G DF + LT+ PRPETE LV+ + R Sbjct: 184 LVRRKTMEPIQYLTGQWDFLDYVLTVRHPLLCPRPETEELVELVREDLATLAAKNNSDRC 243 Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA---VTNGVSERFDT-- 152 +RILD+G GTG + ++L + P +D+ A+ A NA + RF+ Sbjct: 244 RLRILDVGCGTGCIGVSLAAKLPNSFVEAIDVEHVAVATATENAERVLGAQYQARFNAQL 303 Query: 153 LQSDWF--SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210 +++ F ++V+ FD +VSNPPYI + L V DF+ +L GG DGL R+I Sbjct: 304 CEAEVFDVATVQDRFDAVVSNPPYIPRADMGTLETTVVDFESETALCGGEDGLDVVRSIV 363 Query: 211 DGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR---KLFLVNAFKDYGGNDR 258 + ++ +C +E+ + + ES + V+ ++D GNDR Sbjct: 364 KKLPFWCVENAVCWMEVDPTHPALLRKWLESDCSLGVVFVHTYRDLYGNDR 414 >gi|82751718|ref|YP_417459.1| hypothetical protein SAB2001c [Staphylococcus aureus RF122] gi|82657249|emb|CAI81690.1| conserved hypothetical protein [Staphylococcus aureus RF122] gi|298695391|gb|ADI98613.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus ED133] gi|323439334|gb|EGA97058.1| HemK family modification methylase [Staphylococcus aureus O11] gi|323442457|gb|EGB00086.1| HemK family modification methylase [Staphylococcus aureus O46] Length = 278 Score = 85.9 bits (211), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 70/226 (30%), Positives = 114/226 (50%), Gaps = 12/226 (5%) Query: 41 AIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR 100 A+ R L E I I+G+ FY ++S+ PRPETE + L F L ++E D Sbjct: 59 ALQRMLLGEPIQYIVGFASFYGRTFDVNSNCLIPRPETE---EVMLHF-LQQLE--DDAT 112 Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 I+D+GTG+G + + L E P + DIS +A+ +A++NA + +F L D Sbjct: 113 IVDIGTGSGVLAITLKCEKPDLNVIATDISLEAMNMARNNAEKHQSQIQF--LTGDALKP 170 Query: 161 V--EGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217 + EG+ + ++SNPPYI+ + + V F+P +L G + Y +I + + + Sbjct: 171 LIKEGIKLNGLISNPPYIDEKDMVTMSPTVTRFEPHQALFADNHGYAIYESIIEDLPHVM 230 Query: 218 NKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDYGGNDRVLLF 262 K EIGYNQ + I S+ ++ KD G+DR++ F Sbjct: 231 EKGSPVVFEIGYNQGEALKSIILSKFPDKKIDIIKDINGHDRIVSF 276 >gi|223966753|emb|CAR93113.1| CG9531-PA [Drosophila melanogaster] Length = 323 Score = 85.9 bits (211), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 73/248 (29%), Positives = 114/248 (45%), Gaps = 29/248 (11%) Query: 21 QVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETE- 79 Q+ ++P L D +RF L+H I+G DF ++ L S F PRPETE Sbjct: 79 QLQLNPGQ-LADFERFLEARCARMPLQH-----IIGEWDFMDITLKTSPSVFIPRPETEE 132 Query: 80 ---LLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136 L++D + V +L++G G+GA+ L++L P ++ S A + Sbjct: 133 FMRLVIDDH--------KNAKHVDLLEVGCGSGAMSLSMLHSLPQVVATAIERSKAATVL 184 Query: 137 AKSNAVTNGVSERFD----TLQSDWFSS---VEGLFDVIVSNPPYIESVIVDCLGLEVRD 189 A NA G+ RF+ T++ D + + +D+I+SNPPY++ L EV Sbjct: 185 AAENAKMLGLLHRFEVHNHTMEEDKYLPDVLKDKKYDLIISNPPYVKIEEFQFLHPEVVV 244 Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI----FESRKLF 245 ++ +LDGG DGL R + D RHL G +E+G + V I +E R F Sbjct: 245 YENLNALDGGSDGLRVARLVFDLACRHLRPGGKLWLELGNDHPPMVKTIMNLKYEGRLKF 304 Query: 246 LVNAFKDY 253 + Y Sbjct: 305 IAGYSDQY 312 >gi|41408559|ref|NP_961395.1| hypothetical protein MAP2461c [Mycobacterium avium subsp. paratuberculosis K-10] gi|41396917|gb|AAS04778.1| HemK [Mycobacterium avium subsp. paratuberculosis K-10] Length = 300 Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 79/237 (33%), Positives = 109/237 (45%), Gaps = 19/237 (8%) Query: 34 QRFF--LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLP 91 Q FF +A+ + + +LG F V L + F PRPETE L++ A A LP Sbjct: 59 QEFFQRYRDAVSARARRVPLQHLLGTAAFGPVLLHVGPGVFVPRPETEALLEWATAQQLP 118 Query: 92 RIEKRDVVRILDLGTGTGAVCLALLKESPF----FKGVGVDISCKALEIAKSNAVTNGVS 147 R V I+DL TG+GA+ +AL + VGVD S ALE A+ NA V Sbjct: 119 ---PRPV--IVDLCTGSGALAVALAHHCAGRGLPARIVGVDNSDAALEYARRNAAGTTVE 173 Query: 148 -ERFDTLQ----SDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202 R D ++ ++G D++V+NPPY+ V L EV DP ++ GG DG Sbjct: 174 LVRADVIELARVPGSAPDLDGRVDLVVANPPYVPDGAV--LEPEVAQHDPHHAVFGGPDG 231 Query: 203 LSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF-LVNAFKDYGGNDR 258 L+ I + R L GL +E V +F+ LF V A +D G R Sbjct: 232 LAVIAPIVELAGRWLRPGGLIGIEHDDTTSHQTVELFDRTGLFDDVRARRDLTGRPR 288 >gi|328950556|ref|YP_004367891.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Marinithermus hydrothermalis DSM 14884] gi|328450880|gb|AEB11781.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Marinithermus hydrothermalis DSM 14884] Length = 276 Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 63/222 (28%), Positives = 105/222 (47%), Gaps = 9/222 (4%) Query: 40 NAIVRS-LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV 98 AI+R + + + ILG +F+ + L ++ PRPETE LV+ AL + + Sbjct: 58 EAILRERVTRKPLQLILGTAEFFGLVLKVAPGVLIPRPETEGLVELALEL----LRDQPA 113 Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 R+LD+GTG+GA+ LAL P D + A+ +A+ NA G++ + ++ + Sbjct: 114 PRVLDVGTGSGAIALALKHARPDAAVWATDTNPAAVALARQNAARLGLT--IEVVEGAFT 171 Query: 159 SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 + + G F +IVSNPPY+ E+ ++P +L G +GL R +A L Sbjct: 172 AGLTG-FHLIVSNPPYLPEAYRREAPPEL-AWEPPSALYAGPEGLDVLRPLARVAQAALE 229 Query: 219 KDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 G ++E+ + E+ V+ KD G R L Sbjct: 230 PGGWLALELSPTHAHTMAEELEALGFSSVSVRKDLAGRARYL 271 >gi|239637410|ref|ZP_04678392.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Staphylococcus warneri L37603] gi|239597010|gb|EEQ79525.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Staphylococcus warneri L37603] Length = 278 Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 72/224 (32%), Positives = 108/224 (48%), Gaps = 18/224 (8%) Query: 44 RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103 R L E I I+G++ FY R T+S PRPETE + L F L + D I D Sbjct: 62 RMLSGEPIQYIVGFQSFYGYRFTVSDRCLIPRPETE---EVMLHF-LNLCNEGDA--IAD 115 Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS-VE 162 +GTG+G + + L K P + D+ ALE+A+ NA +G E D +Q + +E Sbjct: 116 IGTGSGVLGITLKKLKPTLSVIATDLYEDALEVARLNAEQHG--ENIDFIQGNALKPLIE 173 Query: 163 GLFDV--IVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220 V ++SNPPYI+ V + V D++P +L G + Y++I + + + L Sbjct: 174 RNIKVNGLISNPPYIDVKEVKDMAKTVVDYEPHQALFAKSQGYAIYQSILNDLPKVLLPG 233 Query: 221 GLCSVEIGYNQ----KVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 EIGYNQ K V ++ + V +KD DR+L Sbjct: 234 AHVVFEIGYNQGQTLKEIVNDMYPDKA---VAIYKDINQLDRIL 274 >gi|150021299|ref|YP_001306653.1| HemK family modification methylase [Thermosipho melanesiensis BI429] gi|149793820|gb|ABR31268.1| modification methylase, HemK family [Thermosipho melanesiensis BI429] Length = 261 Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 74/259 (28%), Positives = 126/259 (48%), Gaps = 24/259 (9%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 +++ L +TG I P+ L + L + I LK + I + F+ Sbjct: 19 EAYIVLKYLTGKPKEFFIAHPEYELKE---VGLIDLINLRLKRYPLSYITREKGFFKRNF 75 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 + PRPETE+LV+ ++ I+K + +I ++G G+GA+ +++L + G Sbjct: 76 YVEEGVLIPRPETEMLVE----ITIDLIKKNKIRKIAEVGVGSGAIIISILLNTDC-TGY 130 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFD---VIVSNPPYIESVIVDC 182 DIS KA++++K NA GV R ++ + +D +IVSNPPY+ + Sbjct: 131 ATDISEKAIKVSKINAKRYGVEGRLKIVKGSYLEPFLRKWDEIELIVSNPPYVR--LDAT 188 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 L LEV ++P+ +L GG DGL YR + + + +EIG++Q + R Sbjct: 189 LDLEV-GYEPKEALYGGKDGLDFYRNF---LKMYDFSGKIVVMEIGHDQGE-----WFKR 239 Query: 243 KLFLVNAFKDYGGNDRVLL 261 K + V KDY G DR+++ Sbjct: 240 KGWEV--IKDYSGQDRIVI 256 >gi|237797646|ref|ZP_04586107.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Pseudomonas syringae pv. oryzae str. 1_6] gi|331020496|gb|EGI00553.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Pseudomonas syringae pv. oryzae str. 1_6] Length = 302 Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 71/219 (32%), Positives = 106/219 (48%), Gaps = 12/219 (5%) Query: 27 DSVLDDRQRFFLTNAIVRSLKHESIHRI-----LGWRDFYNVRLTLSSDTFEPRPETELL 81 DS LD R + + R +K RI LG F + + PR L Sbjct: 54 DSYLDCRLEVDEISELQRLIKRRIDDRIPTPYLLGEAWFCGMSFIVDERVLIPRSPIAEL 113 Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 ++ A L + RILDL TG+G + +A E P + D+S ALE+A N Sbjct: 114 IEERFAPWL----ASEPARILDLCTGSGCIGIACADEFPEAEVALADLSYDALEVANQNI 169 Query: 142 VTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200 +G+ +R T+Q D F + G FD+IVSNPPY++S + E + +P ++L G Sbjct: 170 ERHGMEDRVYTVQGDGFDGLPGQRFDLIVSNPPYVDSEDFADMPDEYQ-HEPELALACGN 228 Query: 201 DGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 DGL+ R + + HLN+ GL VE+G N +V V ++ Sbjct: 229 DGLNLVRRMLAQAADHLNEKGLLIVEVG-NSQVHVQALY 266 >gi|283458331|ref|YP_003362952.1| methylase of polypeptide chain release factor [Rothia mucilaginosa DY-18] gi|283134367|dbj|BAI65132.1| methylase of polypeptide chain release factor [Rothia mucilaginosa DY-18] Length = 308 Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 70/207 (33%), Positives = 97/207 (46%), Gaps = 12/207 (5%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL------AFSLPRIEK 95 + R + E + I G FY + L + F PRPETELLV+ AL A S PR + Sbjct: 72 VARRVCREPLQHITGSAPFYRLELAVGPGVFVPRPETELLVEEALKVLSTRADSAPRADS 131 Query: 96 RD-VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS-ERFDTL 153 +RI+DL TG+GA+ A+ E P + V++S A+ + N GV + D L Sbjct: 132 ATGGLRIVDLCTGSGAIAAAVKSELPDAQVFAVELSEDAIPYTRRNLEPLGVHLVQGDAL 191 Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL-DGGIDGLSHYRTIADG 212 S S + G FD ++SNPPYI V E DP ++L GG DG+ IA Sbjct: 192 TS--LSELAGTFDAVLSNPPYIPPANVPA-DPEAALHDPDMALYGGGEDGMQMPSAIAAR 248 Query: 213 VSRHLNKDGLCSVEIGYNQKVDVVRIF 239 L GL +E Q+ V + Sbjct: 249 AFELLTPGGLFIMEHDDTQEEAVAELL 275 >gi|224477105|ref|YP_002634711.1| hypothetical protein Sca_1620 [Staphylococcus carnosus subsp. carnosus TM300] gi|222421712|emb|CAL28526.1| conserved hypothetical protein [Staphylococcus carnosus subsp. carnosus TM300] Length = 274 Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 67/236 (28%), Positives = 111/236 (47%), Gaps = 14/236 (5%) Query: 31 DDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSL 90 D+ +RF +A+ R L E I I G++ F + T+ PRPETE L + Sbjct: 44 DELKRF--NDAVDRMLSGEPIQYITGFQTFLGEKFTVDYRCLIPRPETE----EVLMHFI 97 Query: 91 PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150 R ++ DVV D+GTG+G + + L + P K D+ L+IA+ NA + F Sbjct: 98 ERCQQGDVVA--DIGTGSGIIAVMLKQLRPDLKVYATDLYDGPLQIAQQNADAHHTEITF 155 Query: 151 ---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207 + L+ +++ D ++SNPPYI+ + V D++P +L GL+ Y Sbjct: 156 LKGNALEPLVENNIR--LDGLISNPPYIDFADASEMTETVLDYEPHQALFAENHGLAIYA 213 Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL-VNAFKDYGGNDRVLLF 262 I + + + + EIG+ Q + R+ E + + V D GNDR++ F Sbjct: 214 AIIEQLPFVMQNGAIVVFEIGFEQGPTLKRMIEEKYPHIEVEVIADINGNDRIVSF 269 >gi|33239811|ref|NP_874753.1| methylase of polypeptide chain release factor [Prochlorococcus marinus subsp. marinus str. CCMP1375] gi|33237337|gb|AAP99405.1| Methylase of polypeptide chain release factor [Prochlorococcus marinus subsp. marinus str. CCMP1375] Length = 293 Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 68/211 (32%), Positives = 101/211 (47%), Gaps = 8/211 (3%) Query: 57 WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116 WRDF L ++S PR ETE+L+D AL + K R DLGTG+GA+ +AL Sbjct: 87 WRDF---ELKVNSSALIPRQETEILIDIALKKVDAGLMKYG--RWADLGTGSGALAVALA 141 Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPP 173 + P ++G D AL +A+SN T + DW+ ++ G FD++V+NPP Sbjct: 142 RALPLWEGHAADCCNDALALAESNINTLTENANVSLHLGDWWEPLKPWWGNFDLVVANPP 201 Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233 YI + L VRD +P ++L GG DG+ R + G + L G +E ++Q Sbjct: 202 YIPKTHLSELDPVVRDHEPILALSGGDDGMDSCRKVIKGAMKGLRSGGWLLLEHNFDQSE 261 Query: 234 DVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 + + V+ D G R L R Sbjct: 262 QALNLMVDSGFLEVDFENDLEGVRRFGLALR 292 >gi|299821848|ref|ZP_07053736.1| protein-(glutamine-N5) methyltransferase [Listeria grayi DSM 20601] gi|299817513|gb|EFI84749.1| protein-(glutamine-N5) methyltransferase [Listeria grayi DSM 20601] Length = 285 Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 68/222 (30%), Positives = 107/222 (48%), Gaps = 10/222 (4%) Query: 44 RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103 R L E I IL F+ + + PRPETE LV AL + +K ++LD Sbjct: 64 RYLAGEPIQYILKTAPFFGYDFYVDNHVLIPRPETEELVYKALETA----KKTGFRKVLD 119 Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER-FDTLQSDWFSSVE 162 + TG+G + + + KE P DIS +AL+++K NA G R +T +D+F Sbjct: 120 ICTGSGVIGITMKKELPELTITLSDISPEALQVSKKNAQQLGAEVRCIETDVADYFVDNC 179 Query: 163 GLFDVIVSNPPYIESVIVDCLGLE--VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220 + +I++NPPYI + LG+ V +P ++L +GL+ Y + + + + Sbjct: 180 EKYQLIIANPPYIAE--HERLGMSDLVLKNEPELALFAENNGLAIYEKLVKQLPAIVEAN 237 Query: 221 GLCSVEIGYNQKVDVVRIFE-SRKLFLVNAFKDYGGNDRVLL 261 VEIGY Q V +F+ S V KD G DR+++ Sbjct: 238 FWIGVEIGYQQGESVRALFQKSFPQVPVVIHKDINGKDRMVI 279 >gi|254426996|ref|ZP_05040703.1| methyltransferase, HemK family [Alcanivorax sp. DG881] gi|196193165|gb|EDX88124.1| methyltransferase, HemK family [Alcanivorax sp. DG881] Length = 309 Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 48/138 (34%), Positives = 79/138 (57%), Gaps = 1/138 (0%) Query: 91 PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150 P ++ V R+LDL TG+G + +A + G DIS +AL + + N +G++E+ Sbjct: 128 PWVDPERVHRVLDLCTGSGCIAIACAYAFEHAQVDGSDISAEALAVCEENIQRHGLAEQV 187 Query: 151 DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210 LQSD ++V+G +D+IVSNPPY+++ + L E R +P ++L G DGL R + Sbjct: 188 RALQSDGLAAVDGPYDLIVSNPPYVDAQDMASLPDEYR-HEPELALASGDDGLDFTRKLL 246 Query: 211 DGVSRHLNKDGLCSVEIG 228 L ++G+ VE+G Sbjct: 247 LDAPDQLTEEGVLIVEVG 264 >gi|229551968|ref|ZP_04440693.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Lactobacillus rhamnosus LMS2-1] gi|258539382|ref|YP_003173881.1| modification methylase HemK [Lactobacillus rhamnosus Lc 705] gi|229314703|gb|EEN80676.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Lactobacillus rhamnosus LMS2-1] gi|257151058|emb|CAR90030.1| Modification methylase HemK protein [Lactobacillus rhamnosus Lc 705] Length = 276 Score = 85.5 bits (210), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 73/253 (28%), Positives = 114/253 (45%), Gaps = 14/253 (5%) Query: 11 LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKH-ESIHRILGWRDFYNVRLTLSS 69 + R S ++ D + D R F A V L H E I G F+ ++ Sbjct: 31 MTRADWTPSQLILHRQDPMPDAAWRQF--QADVARLAHFEPAQYITGQAPFFGTMFAVTP 88 Query: 70 DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129 PR ETE LV E+ + LD+GTG+GA+ L L ++ P D+ Sbjct: 89 AVLIPRFETEELVAWVAE------EQTNAQTGLDMGTGSGAIGLTLARQLPQIDMTLSDV 142 Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRD 189 S AL +AK NA S F T SD F+ + G FD +V+N PYI + Sbjct: 143 SPSALAVAKQNAAAQKASVHFVT--SDLFNHLPGRFDFVVTNLPYIAPEEASVMDQSTLR 200 Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249 ++P+++L GL+ + + +HLN G +E GY+Q+ + ++F + KL A Sbjct: 201 YEPKLALFADHHGLALFERFVTELPQHLNPHGAVYLEFGYHQEPALRQLF-AEKLPQAQA 259 Query: 250 F--KDYGGNDRVL 260 +D G+ R++ Sbjct: 260 TFRRDMAGHPRMV 272 >gi|330684796|gb|EGG96489.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Staphylococcus epidermidis VCU121] Length = 278 Score = 85.5 bits (210), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 59/191 (30%), Positives = 93/191 (48%), Gaps = 11/191 (5%) Query: 44 RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103 R L E I I+G++ FY R T+S PRPETE ++ L D I D Sbjct: 62 RMLSGEPIQYIVGFQSFYGYRFTVSDRCLIPRPETEEVMLHFLNLC------NDGDAIAD 115 Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-- 161 +GTG+G + + L K P + D+ AL++A+ NA +G E D +Q + + Sbjct: 116 IGTGSGVLGITLKKLKPTLSVIATDLYEDALDVARLNAEQHG--ENIDFIQGNALKPLIE 173 Query: 162 -EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220 + ++SNPPYI+ V + V D++P +L +G + Y++I + + + L Sbjct: 174 RNIKLNGLISNPPYIDVKEVKDMAKTVVDYEPHQALFAKSEGYAIYQSILNDLPKVLLPG 233 Query: 221 GLCSVEIGYNQ 231 EIGYNQ Sbjct: 234 AHVMFEIGYNQ 244 >gi|209965995|ref|YP_002298910.1| modification methylase,hemK family [Rhodospirillum centenum SW] gi|209959461|gb|ACJ00098.1| modification methylase,hemK family [Rhodospirillum centenum SW] Length = 338 Score = 85.5 bits (210), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 53/140 (37%), Positives = 79/140 (56%), Gaps = 6/140 (4%) Query: 97 DVVRILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVSERFDTLQ 154 +V R+LDL TG+G CLA+L F VD+S +ALE+A+ N G+ ER +Q Sbjct: 169 EVGRVLDLCTGSG--CLAILAAGIFPDATVDAVDLSPEALEVARINVAEAGLEERVSLIQ 226 Query: 155 SDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213 D F ++G +DVI++NPPY+ + + L E R +P+++L G DGL R I Sbjct: 227 GDLFKPLKGRRYDVILTNPPYVSAEAMAELPPEYR-HEPQMALGSGEDGLDIVRRILAEA 285 Query: 214 SRHLNKDGLCSVEIGYNQKV 233 RHL ++G EIG + + Sbjct: 286 HRHLTEEGGLLCEIGTGRTI 305 >gi|21283770|ref|NP_646858.1| hypothetical protein MW2041 [Staphylococcus aureus subsp. aureus MW2] gi|49486910|ref|YP_044131.1| hypothetical protein SAS2020 [Staphylococcus aureus subsp. aureus MSSA476] gi|297210062|ref|ZP_06926455.1| protein-(glutamine-N5) methyltransferase [Staphylococcus aureus subsp. aureus ATCC 51811] gi|300910425|ref|ZP_07127877.1| protein-(glutamine-N5) methyltransferase [Staphylococcus aureus subsp. aureus TCH70] gi|21205212|dbj|BAB95906.1| MW2041 [Staphylococcus aureus subsp. aureus MW2] gi|49245353|emb|CAG43828.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus MSSA476] gi|296885262|gb|EFH24202.1| protein-(glutamine-N5) methyltransferase [Staphylococcus aureus subsp. aureus ATCC 51811] gi|300888267|gb|EFK83458.1| protein-(glutamine-N5) methyltransferase [Staphylococcus aureus subsp. aureus TCH70] Length = 278 Score = 85.1 bits (209), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 67/233 (28%), Positives = 111/233 (47%), Gaps = 26/233 (11%) Query: 41 AIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR 100 A+ R L E I I+G+ FY ++S+ PRPETE + L ++E D Sbjct: 59 ALQRMLLGEPIQYIVGFASFYGRTFDVNSNCLIPRPETE----EVMLHFLQQLE--DDAT 112 Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDW 157 I+D+GTG+G + + L E P + DIS +A+ +A++NA + +F D L+ Sbjct: 113 IVDIGTGSGVLAITLKCEKPDLNVIATDISLEAMNMARNNAEKHQSQIQFLTGDALKPLI 172 Query: 158 FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217 ++ + ++SNPPYI+ + + V F+P +L G + Y +I + + + Sbjct: 173 NEDIK--LNGLISNPPYIDEKDMVTMSPTVTRFEPHQALFADNHGYAIYESIIEDLPHVM 230 Query: 218 NKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK--------DYGGNDRVLLF 262 K EIGYNQ E+ K ++N F D G+DR++ F Sbjct: 231 EKGSPVVFEIGYNQG-------EALKSIILNKFPDKKIDIIKDINGHDRIVSF 276 >gi|329729336|gb|EGG65744.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Staphylococcus aureus subsp. aureus 21193] Length = 277 Score = 85.1 bits (209), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 69/233 (29%), Positives = 113/233 (48%), Gaps = 26/233 (11%) Query: 41 AIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR 100 A+ R L E I I+G+ FY ++S+ PRPETE + L F L ++E D Sbjct: 58 ALQRMLLGEPIQYIVGFASFYGRTFDVNSNCLIPRPETE---EVMLHF-LQQLE--DDAT 111 Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDW 157 I+D+GTG+G + + L E P + DIS +A+ +A++NA + +F D L+ Sbjct: 112 IVDIGTGSGVLAITLKCEKPDLNVIATDISLEAMNMARNNAEKHQSQIQFLTGDALKPLI 171 Query: 158 FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217 ++ + ++SNPPYI+ + + V F+P +L G + Y +I + + + Sbjct: 172 NEDIK--LNGLISNPPYIDEKDMVTMSPTVTRFEPHQALFADNHGYAIYESIIEDLPHVM 229 Query: 218 NKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK--------DYGGNDRVLLF 262 K EIGYNQ E+ K ++N F D G+DR++ F Sbjct: 230 EKGSPVVFEIGYNQG-------EALKSIILNKFPDKKIDIIKDINGHDRIVSF 275 >gi|206900454|ref|YP_002250521.1| bifunctional methyltransferase [Dictyoglomus thermophilum H-6-12] gi|206739557|gb|ACI18615.1| bifunctional methyltransferase [Dictyoglomus thermophilum H-6-12] Length = 274 Score = 85.1 bits (209), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 64/218 (29%), Positives = 113/218 (51%), Gaps = 18/218 (8%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110 ++ I+ ++FYN + PR ETE+L++ A I + R+ ++G G+G Sbjct: 62 LNYIIKKKEFYNTEFFIEKGVLIPRNETEILIEVAKD----SILREGYYRVAEVGVGSGN 117 Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW-----FSSVEGLF 165 + + L KE K DIS KA++IA+ NA N VS++ + + + +++ F Sbjct: 118 ISITLAKEFENIKIYACDISPKAIKIARFNAEINKVSDKIEFFYGPFIYPLIYRNID--F 175 Query: 166 DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225 ++++SNPPY+ S L EV+ +P +L GG DG YRT+ + + K + + Sbjct: 176 EILLSNPPYVASYEFPFLQKEVKR-EPWEALYGGWDGCEFYRTLFK-ILKDKGKKFVAIL 233 Query: 226 EIG---YNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 EI Y + +++V+ F + +V +F+D G RVL Sbjct: 234 EISPFIYKKVLNIVKRFFNN--VIVESFEDSLGYKRVL 269 >gi|319778151|ref|YP_004134581.1| methyltransferase small [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317171870|gb|ADV15407.1| methyltransferase small [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 241 Score = 85.1 bits (209), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 65/209 (31%), Positives = 97/209 (46%), Gaps = 9/209 (4%) Query: 60 FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119 F +V L L+ PR ETELL ALA R V+ D+ G+G + LA+ E Sbjct: 19 FMSVMLELAPGVLVPRQETELLGQRALAILGDRAPGPMVI---DMCCGSGNLALAIAAEV 75 Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-----LFDVIVSNPPY 174 P + GVD++ + +A+SNA + +R + D F ++EG D+IV NPPY Sbjct: 76 PSARVWGVDVTDSTVALARSNAERLALQDRVTIRKGDLFGALEGDGLIGAADMIVCNPPY 135 Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234 I + ++ + + +PR + DGG G+S + + + L DG E G Q Sbjct: 136 ISTARLEGESAHLLEGEPREAFDGGPYGISIQQRLIRDATDFLKPDGWLLFEFGQGQDRQ 195 Query: 235 VVRIFESRKLFLVNAF-KDYGGNDRVLLF 262 V + K + F KD G RV L Sbjct: 196 VAALIARAKAYEPVTFAKDEVGMPRVALL 224 >gi|329956197|ref|ZP_08296877.1| protein-(glutamine-N5) methyltransferase [Bacteroides clarus YIT 12056] gi|328524671|gb|EGF51732.1| protein-(glutamine-N5) methyltransferase [Bacteroides clarus YIT 12056] Length = 282 Score = 85.1 bits (209), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 76/259 (29%), Positives = 113/259 (43%), Gaps = 16/259 (6%) Query: 12 CRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDT 71 C + G ++ + D +L ++ L + R E I I G F ++ Sbjct: 34 CEILGQTAVDYYLGKDIILSPKEMQDLDGILARLHNFEPIQYIQGTARFLERSYHVAPGV 93 Query: 72 FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131 PRPETE LV++ L E R+LD+GTG+G + ++L K P K DIS Sbjct: 94 LIPRPETEELVETMLK------EIASDARVLDIGTGSGCIAVSLSKAFPDAKVTAWDISD 147 Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFSSVEG---LFDVIVSNPPYIESVIVDCLGLEVR 188 +AL IA+ N G + RF L+ + + G +DVIVSNPPY+ + V Sbjct: 148 EALNIARRNNDMLGGNVRF--LRQNVLTYTPGDSECYDVIVSNPPYVTESEKQTMERNVL 205 Query: 189 DFDPRISL---DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245 D++P +L D D L YR IA+ L G EI + + Sbjct: 206 DWEPFSALFVPDN--DPLLFYRRIAELGKTMLAPGGRLYFEINRAYGEATATMLCEQGYT 263 Query: 246 LVNAFKDYGGNDRVLLFCR 264 + KD GNDR+++ R Sbjct: 264 NLQVLKDISGNDRIVIAER 282 >gi|291320736|ref|YP_003516001.1| protoporphirogen oxidase HEMK [Mycoplasma agalactiae] gi|290753072|emb|CBH41048.1| Protoporphirogen oxidase HEMK [Mycoplasma agalactiae] Length = 240 Score = 85.1 bits (209), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 59/179 (32%), Positives = 92/179 (51%), Gaps = 7/179 (3%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110 I I+G+ ++ NVR+ L+ PR ETE LV L L + +++LDL G+G Sbjct: 34 IQYIMGYVEYANVRINLNHKVLIPRYETEELVYILLNEYL-----KPGMKVLDLCAGSGF 88 Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTN-GVSERFDTLQSDWFSSVEGLFDVIV 169 + +AL K + DI +A+ A N V N + +QSD F+ ++G FD+IV Sbjct: 89 IGIALKKNLDSINVILSDIDNEAIMQANENVVLNFKNTTGIQIVQSDCFNDIKGKFDLIV 148 Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228 SNPPY++ D + V+ F+P I+L G Y I + +LN+ G+ + EI Sbjct: 149 SNPPYLDYDDKD-VDESVKKFEPEIALFAKDSGWYFYEKILNEAKHYLNEGGILAFEIN 206 >gi|220935549|ref|YP_002514448.1| Methylase of polypeptide chain release factors-like protein [Thioalkalivibrio sp. HL-EbGR7] gi|219996859|gb|ACL73461.1| Methylase of polypeptide chain release factors-like protein [Thioalkalivibrio sp. HL-EbGR7] Length = 296 Score = 85.1 bits (209), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 67/237 (28%), Positives = 107/237 (45%), Gaps = 9/237 (3%) Query: 30 LDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFS 89 LD L + + L + + G +DF + L S PR ETE+L +A+ Sbjct: 57 LDQAAEGLLNTLVDKRLAGTPLSHLTGRQDFMGLVLKSSEAALVPRRETEILGRAAIG-K 115 Query: 90 LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 L +E + R++DL TG G + LA+ +P + G D+S +A+ +A+ NA G + Sbjct: 116 LADVEG-ESPRVVDLCTGCGNLALAMAVSAPRARVWGSDLSEEAVALARENAAFIGRPD- 173 Query: 150 FDTLQSDWFSSVE-----GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204 + D + + G D++ NPPYI S V+ L E+ +P ++ DGG G+ Sbjct: 174 VSFMAGDLAAPFDNDDFLGRMDLLTCNPPYISSAKVEQLPEEISGHEPHMAFDGGPFGIK 233 Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF-LVNAFKDYGGNDRVL 260 + + + R L G E+G Q + E F V F DY G+ R L Sbjct: 234 IIQRLINDAPRLLKPGGWLLFEVGLGQGEPMKHRLERNDAFDQVETFADYQGDVRAL 290 >gi|299531024|ref|ZP_07044437.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Comamonas testosteroni S44] gi|298720981|gb|EFI61925.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Comamonas testosteroni S44] Length = 315 Score = 85.1 bits (209), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 56/168 (33%), Positives = 92/168 (54%), Gaps = 7/168 (4%) Query: 98 VVRILDLGTGTGAV-CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 V++LDL TG G++ CLA + P + G DIS AL +A+ N +G+ +R L+S+ Sbjct: 138 TVQVLDLCTGNGSLACLAAMA-YPEVRVTGADISTDALAVARINVDKHGLQDRVTLLESN 196 Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216 S V G +D+++ NPPY+ S + L E + +P ++L GG DG+ R + + + Sbjct: 197 GISQVPGPWDLVLCNPPYVNSDSMGKLPAEYQ-AEPELALAGGADGMDFIRRLLEDLPAR 255 Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 LNKD + +EIG N+K F +F ++ G+++VLL Sbjct: 256 LNKDAVVVLEIG-NEKPYFDAAFPDLPVFWLDTSS---GDEQVLLITE 299 >gi|330811121|ref|YP_004355583.1| methyltransferase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327379229|gb|AEA70579.1| Putative methyltransferase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 302 Score = 85.1 bits (209), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 53/137 (38%), Positives = 79/137 (57%), Gaps = 2/137 (1%) Query: 96 RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155 ++ RILDL TG+G + +A E P + V D+S +ALE+A N +GV ER T+Q Sbjct: 124 QEPARILDLCTGSGCIGIACAYEFPEAEVVLADLSFEALEVANQNIERHGVDERVFTVQG 183 Query: 156 DWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214 D F + G FD+IVSNPPY+++ + E + +P + L G DGL+ R + + Sbjct: 184 DGFDGLPGQRFDLIVSNPPYVDAEDFADMPQEYQ-HEPELGLACGDDGLNLVRRMLAEAA 242 Query: 215 RHLNKDGLCSVEIGYNQ 231 HL + GL VE+G +Q Sbjct: 243 DHLTEKGLLIVEVGNSQ 259 >gi|224541462|ref|ZP_03682001.1| hypothetical protein CATMIT_00631 [Catenibacterium mitsuokai DSM 15897] gi|224525620|gb|EEF94725.1| hypothetical protein CATMIT_00631 [Catenibacterium mitsuokai DSM 15897] Length = 277 Score = 85.1 bits (209), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 74/255 (29%), Positives = 119/255 (46%), Gaps = 21/255 (8%) Query: 14 VTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFE 73 +TG + +Q+++ + +++ + + R LK E I+G FY ++ Sbjct: 29 LTGDAYYQLLLKREEPVEEALLMQYKDYLNRYLKGEPYQYIIGKEYFYGREFDVNPSVLI 88 Query: 74 PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133 PR ETE LV+ L++ P + + D+GTG+GA+ + L ES VDIS +A Sbjct: 89 PRYETEELVEKVLSYIKPGM------VVADIGTGSGAIAVTLACESK-ADLYAVDISKEA 141 Query: 134 LEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDF 190 ++ A NA + S F D LQ ++ D++VSNPPYI+ + L V D Sbjct: 142 IDTASKNAKKHEASVTFLEGDLLQPLIDQNIR--VDILVSNPPYID--YDEVLDPRVIDH 197 Query: 191 DPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN-- 248 +P ++L G + Y I L + + + EIGYNQ R+ + L+ N Sbjct: 198 EPHLALFADDHGYACYEKIFKEAPSVLKEKAILAFEIGYNQG---ERMKQLVPLYFPNDT 254 Query: 249 --AFKDYGGNDRVLL 261 KD G DR+L Sbjct: 255 FEVIKDMNGKDRMLF 269 >gi|183984068|ref|YP_001852359.1| modification methylase HemK [Mycobacterium marinum M] gi|183177394|gb|ACC42504.1| modification methylase HemK [Mycobacterium marinum M] Length = 282 Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 68/211 (32%), Positives = 98/211 (46%), Gaps = 9/211 (4%) Query: 50 SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109 + ++G F V L + F PRPETE +++ A A L + I+DL TG+G Sbjct: 69 PLQHLIGTVQFGPVELQVGPGVFVPRPETEAVLEWAGAQQL-----SEYPVIVDLCTGSG 123 Query: 110 AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSDWFSSVEGLFDVI 168 A+ +AL P + +GVD S ALE A+ N+V V R D ++G D++ Sbjct: 124 ALAIALADRWPAARILGVDDSGAALEYAQRNSVGTKVELVRADVTTPGLMPELDGQVDLV 183 Query: 169 VSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228 V+NPPYI V L EV DP +L GG +G++ + R L G +VE Sbjct: 184 VTNPPYIPDGAV--LEPEVAQHDPHRALFGGPNGMAVIPHVVRLAGRWLRPGGRFAVEHD 241 Query: 229 YNQKVDVVRIFESRKLFL-VNAFKDYGGNDR 258 V ES +F + A +D G R Sbjct: 242 DTTARQTVECIESEGVFEDIVARQDLAGRPR 272 >gi|323466866|gb|ADX70553.1| Protein-(Glutamine-N5) methyltransferase, release factor-specific [Lactobacillus helveticus H10] Length = 280 Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 76/258 (29%), Positives = 126/258 (48%), Gaps = 19/258 (7%) Query: 11 LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70 L L+ + + D VL D Q I + K S ILG+ F ++ + Sbjct: 28 LAERLNLTPSEFELKQDMVLSDDQLKQANKDIKKLAKGVSPQYILGYAWFLGYKIMVQRG 87 Query: 71 TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV----- 125 PR ETE LV+ ++L ++ D ++LDLGTG+G + +AL KE+ KG+ Sbjct: 88 VLIPRFETEELVE----WTLKSLKSGD--KVLDLGTGSGCITVALAKEAEK-KGIKDLTL 140 Query: 126 -GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184 DI+ AL ++ N +T + T +++ +E FD I+SNPPYI++ + Sbjct: 141 YASDITDAALRTSEENFLTYDLD--VVTRKANVLIGLEK-FDKIISNPPYIKTTEKKEMD 197 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 V +P+ +L G DGL Y+ A V HLN G +E G++++ + +F +++L Sbjct: 198 ENVLQNEPKEALFAGNDGLDFYKKFAKQVRDHLNSHGEFFLEFGFSEEDQLKELF-AKEL 256 Query: 245 --FLVNAFKDYGGNDRVL 260 F + KD G R++ Sbjct: 257 PDFDIEFRKDVAGKPRMV 274 >gi|315660272|ref|ZP_07913127.1| protein-(glutamine-N5) methyltransferase [Staphylococcus lugdunensis M23590] gi|315494699|gb|EFU83039.1| protein-(glutamine-N5) methyltransferase [Staphylococcus lugdunensis M23590] Length = 279 Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 63/226 (27%), Positives = 109/226 (48%), Gaps = 12/226 (5%) Query: 41 AIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR 100 A+ R L E I I+G++ FY ++ + PRPETE ++ L Sbjct: 59 AVQRMLLGEPIQYIVGFQSFYGYPFKVNENCLIPRPETEEVMLHFLNGC------HSQGS 112 Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV---TNGVSERFDTLQSDW 157 I+D+GTG+GA+ + + K +P K + D+ + L IA+ NA + + + D L+ Sbjct: 113 IVDVGTGSGAIAITIKKLNPQLKVIATDLYKETLTIAQENASYLDADIIFMQGDVLKPLI 172 Query: 158 FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217 +++ D +++NPPYI + V ++P +L +G + Y I D + + L Sbjct: 173 QKNIK--VDGLITNPPYISEKETCQMTNTVLKYEPHHALFAENNGFAIYEAILDDLPKVL 230 Query: 218 NKDGLCSVEIGYNQKVDVVRIFESRKLFL-VNAFKDYGGNDRVLLF 262 N+D + EIGY Q + + ++ R L V KD DR++ F Sbjct: 231 NEDAFVTFEIGYQQGLQLKQLVLQRYPKLDVKVTKDINSLDRIVSF 276 >gi|296454710|ref|YP_003661853.1| HemK family modification methylase [Bifidobacterium longum subsp. longum JDM301] gi|296184141|gb|ADH01023.1| modification methylase, HemK family [Bifidobacterium longum subsp. longum JDM301] Length = 313 Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 64/233 (27%), Positives = 113/233 (48%), Gaps = 24/233 (10%) Query: 44 RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV--RI 101 R K E + I G F + L + F PRPETE +V + L + + + ++ R+ Sbjct: 85 RRAKREPLQYITGHTPFRYLDLQVGPGVFIPRPETETVVQAGLDW----LTRHSMIHPRM 140 Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN-AVTNGVSERFDTLQSDW--- 157 +DL G+GA+ L+++ E P + V++S + E + N AVT ++R+ ++ S++ Sbjct: 141 VDLCAGSGAIGLSIVSEVPGSQVWAVELSPRTAEWTRRNLAVT---AKRYPSIASNYQLE 197 Query: 158 ---------FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG-IDGLSHYR 207 + ++G D++++NPPY+ + EVRD+DP ++L GG DG Sbjct: 198 VADATSLATLAQLDGTIDIVITNPPYVPQTDIPEQP-EVRDWDPELALYGGSADGTLIPE 256 Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 I + R L G+ +E Q +V ++ + KD+ G DR L Sbjct: 257 RIIERAWRLLKPGGVLVMEHDLTQGERLVAYAKATGFATASTGKDWTGRDRYL 309 >gi|315038003|ref|YP_004031571.1| protoporphyrinogen oxidase [Lactobacillus amylovorus GRL 1112] gi|325956456|ref|YP_004291868.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Lactobacillus acidophilus 30SC] gi|312276136|gb|ADQ58776.1| protoporphyrinogen oxidase [Lactobacillus amylovorus GRL 1112] gi|325333021|gb|ADZ06929.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Lactobacillus acidophilus 30SC] gi|327183283|gb|AEA31730.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Lactobacillus amylovorus GRL 1118] Length = 281 Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 77/258 (29%), Positives = 124/258 (48%), Gaps = 19/258 (7%) Query: 11 LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70 L L+ + + D VL + Q I + + S ILG+ F ++ + Sbjct: 29 LAERLNLTPSEFELKQDMVLSEDQVKQANKDIKKLARGVSPQYILGYAWFLGYKIMVQRG 88 Query: 71 TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV----- 125 PR ETE LV+ AL SL +K +LDLGTG+G + +AL KE+ KG+ Sbjct: 89 VLIPRFETEELVEWALK-SLKSGDK-----VLDLGTGSGCITVALAKEAEK-KGIKDLTL 141 Query: 126 -GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184 DI+ AL ++ N + + T +++ +E FD I+SNPPYI++ + Sbjct: 142 YASDITDSALRTSEENFLNYDLD--VTTRKANVLIGLEK-FDKIISNPPYIKTNEKKDMD 198 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 V +P+ +L G DGL Y+ A V HLN G +E G+N++ + +F +++L Sbjct: 199 KNVLQNEPKEALFAGKDGLDFYKKFAKQVRDHLNSHGEFFLEFGFNEEEQLKELF-AKEL 257 Query: 245 --FLVNAFKDYGGNDRVL 260 F + KD G R++ Sbjct: 258 PDFEIEFRKDMAGKPRMV 275 >gi|152981411|ref|YP_001353763.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Janthinobacterium sp. Marseille] gi|151281488|gb|ABR89898.1| modification methylase HemK [Janthinobacterium sp. Marseille] Length = 296 Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 54/140 (38%), Positives = 78/140 (55%), Gaps = 3/140 (2%) Query: 91 PRIEKRDVVR-ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 P + D V IL+L TG+G + + L P VDIS ALE+AK N + R Sbjct: 122 PWVSNPDKVNNILELCTGSGCLPIMLADAFPNAHVDAVDISTDALEVAKRNVEEYELGHR 181 Query: 150 FDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208 + ++SD +++V E FD+I++NPPY+ S +D L E +P+I+L GG DG+ R Sbjct: 182 INLIESDLYANVPEYKFDLIITNPPYVNSGSMDKLPPEYLR-EPQIALAGGTDGMDLVRK 240 Query: 209 IADGVSRHLNKDGLCSVEIG 228 I G + L +GL VEIG Sbjct: 241 IVAGAGQRLTPNGLLMVEIG 260 >gi|124266993|ref|YP_001020997.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Methylibium petroleiphilum PM1] gi|124259768|gb|ABM94762.1| Site-specific DNA-methyltransferase (adenine-specific) [Methylibium petroleiphilum PM1] Length = 288 Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 52/165 (31%), Positives = 86/165 (52%), Gaps = 5/165 (3%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+LDL TG G++ + P G D+S AL +AK N +G+ +R L+SD + Sbjct: 123 RVLDLCTGNGSLAVLAAMAWPEVSVDGSDLSEDALAVAKINVDAHGLGDRVTLLRSDGLA 182 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 V G +D+I+ NPPY+ + + L E R +P ++L GG DG+ R + + + Sbjct: 183 RVHGPYDLILCNPPYVNAASMADLPPEYR-AEPELALAGGEDGMDFVRKLLQDAPAQMTE 241 Query: 220 DGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 D + +EIG N++ + R F + + + G+D+VLL R Sbjct: 242 DAVLVLEIG-NERANFERAFPTIEAVW---LETSAGDDQVLLLTR 282 >gi|311745454|ref|ZP_07719239.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Algoriphagus sp. PR1] gi|126578006|gb|EAZ82226.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Algoriphagus sp. PR1] Length = 277 Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 79/263 (30%), Positives = 119/263 (45%), Gaps = 19/263 (7%) Query: 1 MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60 +Q L + H L +V GL+ V DS+ +D L + R E + I+G F Sbjct: 27 IQWLLEYHLGLRKVDGLNE----VKEDSLSED-----LFEDLQRLKSGEPVQYIIGKAPF 77 Query: 61 YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120 Y + PR ETE LV + + +++LD+GTG+G + ++L E Sbjct: 78 YGRDFFVDESVLIPRNETEELVHMII-----KQNPSAGLKVLDIGTGSGCIPISLALELN 132 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL--FDVIVSNPPYIESV 178 + D+S +ALE+A+ NA G F L D L D++VSNPPY+ Sbjct: 133 KPEIYTADVSEEALEVAEENAEHLGAQVTFFHL--DILKDTPALSELDIVVSNPPYVPEA 190 Query: 179 IVDCLGLEVRDFDPRISL-DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237 D L VRDF+P ++L D L YR IA+ + L G EI N V+ Sbjct: 191 EWDELHSNVRDFEPGLALFVPDHDPLLFYRVIAEKALKLLKPGGKLYYEIHNNFGPQTVK 250 Query: 238 IFESRKLFLVNAFKDYGGNDRVL 260 + ES ++ +D G DR++ Sbjct: 251 LLESLGYKNIDLVQDLNGKDRMV 273 >gi|332535244|ref|ZP_08411048.1| putative 50S subunit L3 protein glutamine methyltransferase [Pseudoalteromonas haloplanktis ANT/505] gi|332035325|gb|EGI71828.1| putative 50S subunit L3 protein glutamine methyltransferase [Pseudoalteromonas haloplanktis ANT/505] Length = 311 Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 55/136 (40%), Positives = 77/136 (56%), Gaps = 2/136 (1%) Query: 94 EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153 E + V RILDL TG+G + +AL + + VDIS +ALE+ N ++ER + Sbjct: 136 EPQSVNRILDLCTGSGCIAIALAQAFEQAQVDAVDISYEALEVTDININDYMLTERVLPI 195 Query: 154 QSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212 QSD FS V G +D+IV+NPPY+++ + L E +P + L G DGL RTI Sbjct: 196 QSDVFSGVPGQKYDLIVANPPYVDAEDMADLPREFH-HEPELGLASGHDGLDVTRTILSE 254 Query: 213 VSRHLNKDGLCSVEIG 228 S HL +GL VE+G Sbjct: 255 ASEHLTDNGLLFVEVG 270 >gi|330444668|ref|YP_004377654.1| protoporphyrinogen oxidase [Chlamydophila pecorum E58] gi|328807778|gb|AEB41951.1| protoporphyrinogen oxidase [Chlamydophila pecorum E58] Length = 288 Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 75/260 (28%), Positives = 111/260 (42%), Gaps = 10/260 (3%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 R++ S L + GLSS+ + D V + + +R K G F + Sbjct: 33 REAASILMDLLGLSSYSQLSDVPYVSEKIIEAYQKRLKLRGEKRCPTAYFHGSVSFLGLS 92 Query: 65 LTLSSDTFEPRPETELLVDSALAF--SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 L + S PR ETELL + + + S P I+ + D+ G+G + LA+ P Sbjct: 93 LNIDSRVLIPRMETELLAERVITYISSHPEIQV-----VYDVCCGSGCIGLAIKNACPQV 147 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182 + V DIS KA+ +AK NA + + D F D V NPPY+ V Sbjct: 148 QVVLSDISPKAVAVAKENARNTRLD--VEVYLGDLFEPYSSPGDAFVCNPPYLSYKEVIR 205 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 EV +P +L GG G+ Y+ IA + + L G+ +EIGY Q V IF R Sbjct: 206 TDPEVHCHEPWQALVGGATGVEFYKRIAQELPKVLKPRGVGWLEIGYTQGSQVKDIF-LR 264 Query: 243 KLFLVNAFKDYGGNDRVLLF 262 + +D+ G DR Sbjct: 265 QGISGEIQQDFAGWDRFFFL 284 >gi|332291079|ref|YP_004429688.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Krokinobacter diaphorus 4H-3-7-5] gi|332169165|gb|AEE18420.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Krokinobacter diaphorus 4H-3-7-5] Length = 288 Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 71/236 (30%), Positives = 111/236 (47%), Gaps = 14/236 (5%) Query: 38 LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL---AFSLPRIE 94 L + R + E I I+G +FY + ++ T PRPETE LVD + A S + E Sbjct: 58 LNDVTGRLSRSEPIQYIVGTTEFYGIEFQVNPATLIPRPETEELVDWIITDKAESFVKSE 117 Query: 95 KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154 ++ ++ILD+GTG+G + ++L K +DIS AL A NA N V F Sbjct: 118 TQEKLKILDIGTGSGCIAISLAKYMSKAHVEAIDISQDALATAYQNAKRNEVDVTFYNQD 177 Query: 155 SDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL-DGGIDGLSHYRTIADGV 213 +E +D+IVSNPPY+ + + V +P +L D L YR I + Sbjct: 178 VLAVEELEHKYDIIVSNPPYVRMLEKKEMRDNVLSNEPDSALFVSDDDPLIFYRKIGELA 237 Query: 214 SRHLNKDGLCSVEIGY---NQKVDVVRI--FESRKLFLVNAFKDYGGNDRVLLFCR 264 L+ +G EI + +D++++ FE+ V +D G DR++ R Sbjct: 238 FESLSVNGFLYFEINEYLGKEMIDLLKVIGFEN-----VELREDMFGKDRMIKASR 288 >gi|304311242|ref|YP_003810840.1| Adenine-specific methylase [gamma proteobacterium HdN1] gi|301796975|emb|CBL45188.1| Adenine-specific methylase [gamma proteobacterium HdN1] Length = 319 Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 53/139 (38%), Positives = 78/139 (56%), Gaps = 2/139 (1%) Query: 91 PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150 P I V ILDL TG+G + +A P VDIS AL+IA+ N G+ + Sbjct: 138 PWIAAERVESILDLCTGSGCIGIACAHHFPDVIVDCVDISEAALDIAEENLQNLGLESQV 197 Query: 151 DTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209 + + SD F +++G +D+IVSNPPY++ + L E R +P + L+ G DGL R I Sbjct: 198 NLIFSDLFEALDGRTYDIIVSNPPYVDERDMAELPTEYR-HEPELGLEAGGDGLDIVRRI 256 Query: 210 ADGVSRHLNKDGLCSVEIG 228 +SRHLN +G+ +E+G Sbjct: 257 LPELSRHLNPEGIAVIEVG 275 >gi|307213045|gb|EFN88576.1| HemK methyltransferase family member 1 [Harpegnathos saltator] Length = 366 Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 66/236 (27%), Positives = 110/236 (46%), Gaps = 28/236 (11%) Query: 46 LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV--VRILD 103 L + I+G DF ++ + L F PRPETE+LVD F L R+ + IL+ Sbjct: 128 LSRMPVQYIIGEWDFRDITVKLVPPVFIPRPETEILVD----FVLKRLNSSPLENCEILE 183 Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN----AVTNGVSERFDTLQSDWFS 159 +G G+GA+ LAL K +D S A ++ +N + + ++ TL+ D Sbjct: 184 IGCGSGAISLALAHACKKIKCTAIDASPHACDLTMTNRSQLNLMDQIAVIHATLKPDATV 243 Query: 160 SVEGL-------------FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206 V + FD +VSNPPY+ + + L E++ ++ +LDGG DGL Sbjct: 244 EVTSMSNGAGKMDLNSKQFDFVVSNPPYVPTKKILDLEPEIKIYEDLRALDGGDDGLKVI 303 Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR----KLFLVNAFKDYGGNDR 258 + + ++ L G VE+ + ++ F ++ KL + +KD+ NDR Sbjct: 304 KPLLRYSAKALKPGGRLLVEVDSTHP-EYIKFFTNKYSDLKLHYEHTYKDFCNNDR 358 >gi|297626233|ref|YP_003687996.1| methylase [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296921998|emb|CBL56560.1| Methylase [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length = 292 Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 70/226 (30%), Positives = 101/226 (44%), Gaps = 4/226 (1%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLP-RIEKRDVVR 100 I R E + + G F + + + F PRPETE +V AL L R + Sbjct: 62 IRRRAAGEPVQYLTGRAWFRKIDVQVGPGVFIPRPETEAVVHFALDQLLNLRADTGPSPV 121 Query: 101 ILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 I+DLGTG+G + ++L E P + V+ S +ALE A+ N + + +D Sbjct: 122 IVDLGTGSGVIAKSILSEYPGTPRMYAVERSPQALEWARRNLADTPATVVAGDM-ADALP 180 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 +EG D+++SNPPY+ + D L +V D+DP +L GG DGL R I +R L Sbjct: 181 QLEGKVDLVISNPPYLPAAHADELPADVLDYDPHEALFGGDDGLETIRGIVPVATRLLRP 240 Query: 220 DGLCSVEIGYNQKVDVVRIFESRKLF-LVNAFKDYGGNDRVLLFCR 264 G VE Q I + F V D G R + R Sbjct: 241 GGWLIVEHDDTQGHSAAGIISAAGRFEHVEDHPDLTGRPRFVTAIR 286 >gi|256380140|ref|YP_003103800.1| modification methylase, HemK family [Actinosynnema mirum DSM 43827] gi|255924443|gb|ACU39954.1| modification methylase, HemK family [Actinosynnema mirum DSM 43827] Length = 288 Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 74/264 (28%), Positives = 111/264 (42%), Gaps = 22/264 (8%) Query: 6 DSHSFLCRVTGLSSHQVIVDP---DSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 D+H + G+ ++++ P VLD+ A L+H + G + Sbjct: 28 DAHLLAAHLLGVPPGKLVLTPMVEPRVLDELGALVAKRATRVPLQH-----LTGEAHLWG 82 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 V L + F PRPETELLV+ AL R R VV +DL TG+GA+ L++ P Sbjct: 83 VDLAVGPGVFIPRPETELLVEWALNAV--RGAARPVV--VDLCTGSGALALSIAHHRPDA 138 Query: 123 KGVGVDISCKALEIAKSNAVTNGVS-------ERFDTLQSDWFSSVEGLFDVIVSNPPYI 175 V+ AL A+ NA + D S ++G D++V NPPY+ Sbjct: 139 VVHAVEKDPTALSWARRNADARSAAGDTPIRLHHGDVTAPGVLSDLDGAVDLVVCNPPYV 198 Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235 + EV D DPR ++ GG DGL R + +R L G ++E V Sbjct: 199 PDATE--VQPEVADHDPRAAVFGGADGLDVIRHVVTLAARLLKPGGHVAIEHDDTHGEAV 256 Query: 236 VRIFESRKLFL-VNAFKDYGGNDR 258 + +RK+ +D G R Sbjct: 257 PALLATRKVLADATPHRDLAGRPR 280 >gi|242371608|ref|ZP_04817182.1| HemK family methyltransferase [Staphylococcus epidermidis M23864:W1] gi|242350675|gb|EES42276.1| HemK family methyltransferase [Staphylococcus epidermidis M23864:W1] Length = 278 Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 64/227 (28%), Positives = 111/227 (48%), Gaps = 18/227 (7%) Query: 41 AIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR 100 A+ R LK E I I+G++ FY + + ++ PRPETE ++ L R+ Sbjct: 59 ALHRMLKGEPIQYIVGFQSFYGYKFKVDANCLIPRPETEEVMLHFLKLC------RNKDG 112 Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 ++D+GTG+GA+ + L P D+ L +A++NA T+ F LQ + Sbjct: 113 VVDIGTGSGAIAVTLKLLRPDLDVYATDLYEDTLNVARNNADTHQQDIHF--LQGNALKP 170 Query: 161 V--EGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217 + +G+ D ++SNPPYI+ + V F+P +L G + Y I + + + Sbjct: 171 LIEKGIKVDGLISNPPYIDEAESKDMDDTVLQFEPHHALFAENKGYAIYEDILKDLPQVM 230 Query: 218 NKDGLCSVEIGYNQ----KVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 N++G EIGYNQ K V ++ +++ V +D G+ R++ Sbjct: 231 NENGHVVFEIGYNQGEKLKSIVTTMYPNKE---VEVIRDINGHQRIV 274 >gi|158604957|gb|ABW74773.1| bifunctional methyltransferase [Campylobacter concisus 13826] Length = 270 Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 75/263 (28%), Positives = 118/263 (44%), Gaps = 32/263 (12%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 R + L +S + ++ S D+ F L + R +E + I G FY + Sbjct: 23 RVAKILLMSYLDVSIEWIFLNQKSECDESGYFAL---VKRFENYEPLEYITGKAGFYGLE 79 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL-LKESPFFK 123 + S PRPETE+LVD L + +I ++GTG+G + + L LK + K Sbjct: 80 FEVESGVLIPRPETEILVDKVLEIA----SSYKAPKIAEIGTGSGIISVMLALKTNA--K 133 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183 V DI+ KAL +AK NA+ VS++ + ++ + + G D++VSNPPYI Sbjct: 134 IVATDINEKALNLAKKNALKFNVSDKIEFIKCSYIDEISGDIDILVSNPPYI-------- 185 Query: 184 GLEVRDF--------DPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235 RD+ +P +L GG G + I K+ C E+GY+Q+V + Sbjct: 186 ---ARDYKLDKFVINEPHEALFGGEIGDEILKNIILIARNRDIKNIAC--EMGYDQRVSM 240 Query: 236 VRIFESRKLFLVNAFKDYGGNDR 258 + F +KD G DR Sbjct: 241 EMALKFNG-FKSAFYKDLAGFDR 262 >gi|295692624|ref|YP_003601234.1| protoporphyrinogen oxidase [Lactobacillus crispatus ST1] gi|295030730|emb|CBL50209.1| Protoporphyrinogen oxidase [Lactobacillus crispatus ST1] Length = 281 Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 66/219 (30%), Positives = 114/219 (52%), Gaps = 19/219 (8%) Query: 50 SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109 S ILG+ F ++ + PR ETE LV+ ++L ++ D ++LDLGTG+G Sbjct: 68 SPQYILGYAWFLGYKIMVQRGVLIPRFETEELVE----WALQTLKSGD--QVLDLGTGSG 121 Query: 110 AVCLALLKESPFFKGV------GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG 163 + +AL KE+ KG+ D++ AL ++ N +T + T +++ +E Sbjct: 122 CITVALAKEAQK-KGITDLTLYASDVTDTALRTSEENFLTYDLD--VTTRKANVLLGLEE 178 Query: 164 LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223 FD I+SNPPYI++ + + V +P+ +L G DGL Y+ A V HLN G Sbjct: 179 -FDKIISNPPYIKTSEKNAMDENVLQNEPKEALFAGKDGLDFYKKFAKQVREHLNSHGEF 237 Query: 224 SVEIGYNQKVDVVRIFESRKL--FLVNAFKDYGGNDRVL 260 +E G++++ + +F +++L F + KD G R++ Sbjct: 238 FLEFGFSEEEQLKELF-AKELPDFEIEFRKDMAGKPRMV 275 >gi|226939724|ref|YP_002794797.1| adenine-specific methylase [Laribacter hongkongensis HLHK9] gi|226714650|gb|ACO73788.1| Probable adenine-specific methylase [Laribacter hongkongensis HLHK9] Length = 303 Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 65/178 (36%), Positives = 96/178 (53%), Gaps = 11/178 (6%) Query: 91 PRIEKRDVVR-ILDLGTGTGAVCLALLKE--SPFFKGVGVDISCKALEIAKSNAVTNGVS 147 P IE ++V LDL TG+G CLA+L P +D+S ALE+A N G+ Sbjct: 123 PWIEHPELVHSALDLCTGSG--CLAILTALYYPDADVDAIDLSPDALEVAGINVGRYGMQ 180 Query: 148 ERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206 +R ++SD ++ V GL +D+IVSNPPY+++ V L E +P ++L G DGL Sbjct: 181 DRIRLVESDLWAGVAGLSYDLIVSNPPYVDAESVAALPDEYLK-EPELALGSGDDGLEAT 239 Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 R I + + HLN G+ VEIG+N+ DV+ + + F + GG+ V L R Sbjct: 240 RRILEEAAAHLNPFGVLVVEIGHNR--DVLEMQYPQLPF--TWLETSGGDGFVFLLTR 293 >gi|83645219|ref|YP_433654.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Hahella chejuensis KCTC 2396] gi|83633262|gb|ABC29229.1| Methylase of polypeptide chain release factors [Hahella chejuensis KCTC 2396] Length = 301 Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 64/208 (30%), Positives = 104/208 (50%), Gaps = 6/208 (2%) Query: 27 DSVLDDRQRFFLTNAI-VRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85 D+ L D ++ L AI R L+ ILG F + ++ D PR L++ Sbjct: 62 DARLVDHEKLALAEAIGKRVLQRIPTPYILGEAWFMGLPFHITQDVLIPRSPIAELLEHE 121 Query: 86 LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145 L P +E+ + RILDL G+G + +A P + V DIS AL++A+ N + Sbjct: 122 LQ---PWLEQPPL-RILDLCCGSGCIGIAAAHVFPEAEVVLADISPLALDVARRNVARHH 177 Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSH 205 + +R ++SD F +++G FDVI++NPPY++ +D L E +P + L G+DGL Sbjct: 178 LGDRCKVVESDMFDALQGEFDVILTNPPYVDKPDMDSLPPEYL-HEPELGLASGVDGLDA 236 Query: 206 YRTIADGVSRHLNKDGLCSVEIGYNQKV 233 R I + L+ G E+G + + Sbjct: 237 ARIILARAADFLSDGGFMVCEVGNSMEA 264 >gi|119898299|ref|YP_933512.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Azoarcus sp. BH72] gi|119670712|emb|CAL94625.1| site-specific DNA-methyltransferase (adenine-specific) [Azoarcus sp. BH72] Length = 320 Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 57/176 (32%), Positives = 91/176 (51%), Gaps = 7/176 (3%) Query: 91 PRIE-KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 P +E V LDL TG+G + + + P + VGVD+S AL++A N G+ +R Sbjct: 145 PWVEDPEQVSSALDLCTGSGCLAILMAHAFPNAQIVGVDLSDDALDVAAENVADYGLEDR 204 Query: 150 FDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208 + ++SD F +++G FD I+SNPPY+ + + L E +PR++L G DGL R Sbjct: 205 VELVKSDVFDALDGRRFDFILSNPPYVTADAMASLPPEYL-HEPRMALAAGDDGLDVVRR 263 Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 + HL G +VE+G+N+ + V F ++ GG+D + L R Sbjct: 264 LLAQARDHLTPKGFLAVEVGHNRDI-VEAAFPELSFTWLSC---RGGDDMIFLLHR 315 >gi|148377996|ref|YP_001256872.1| protoporphirogen oxidase HEMK [Mycoplasma agalactiae PG2] gi|148292042|emb|CAL59434.1| Protoporphirogen oxidase HEMK [Mycoplasma agalactiae PG2] Length = 240 Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 67/209 (32%), Positives = 106/209 (50%), Gaps = 14/209 (6%) Query: 27 DSVLDDRQRFFLTNAIVRSLKHESIHR------ILGWRDFYNVRLTLSSDTFEPRPETEL 80 D +L +++R+ L V SL+ E +++ I+G+ ++ NVR+ L+ PR ETE Sbjct: 5 DDLLLEKKRYGLE-LKVSSLELEKLNQGYPIQYIMGYVEYVNVRINLNHKVLIPRYETEE 63 Query: 81 LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140 LV L L + +++LDL TG+G + +AL K DI +A+ A N Sbjct: 64 LVYILLNEHL-----KPGMKVLDLCTGSGFIGIALKKNLDSINVTLSDIDNEAIMQANEN 118 Query: 141 AVTN-GVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199 N +E +QSD F ++G FD+IVSNPPY++ D + V+ F+P I+L Sbjct: 119 VALNFKDTEGIKVVQSDCFKDIKGKFDLIVSNPPYLDYDDKD-VDESVKKFEPEIALFAK 177 Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSVEIG 228 G Y I + +LN G+ + EI Sbjct: 178 DSGWYFYEKILNEAKIYLNVGGVLAFEIN 206 >gi|313837662|gb|EFS75376.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes HL037PA2] gi|314927457|gb|EFS91288.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes HL044PA1] gi|314972602|gb|EFT16699.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes HL037PA3] gi|328907543|gb|EGG27309.1| putative methylase [Propionibacterium sp. P08] Length = 291 Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 69/256 (26%), Positives = 112/256 (43%), Gaps = 9/256 (3%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ LC G+ Q+I DD RF + R E I+G F +R+ Sbjct: 28 DARMLLCEALGIQPSQLIRVASVHADDEDRF--NEMVDRRRAGEPAQFIVGHAWFRGLRV 85 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 + F PR ETEL+ + A+ + + ++DL TGTGA+ LA+ E P + Sbjct: 86 EVGPGVFIPRLETELVAEQAVQEAQRLVMASACPSVVDLCTGTGAIALAVASEVPGSRVS 145 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCL 183 V++ AL A+ N +GV + L D + FDV+V+NPPY+ + + Sbjct: 146 AVEMDEAALTWARRNLCDSGV----EILAGDALRVPDDGRRFDVVVTNPPYLRRIDASSI 201 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 EV +P ++L G DGL R + + L GL +E Q+ +++ + Sbjct: 202 PDEVTGHEPDLALFSGDDGLDLPRQLVGRAAELLTAGGLFIMEHDETQRDELMTAMATSH 261 Query: 244 LF-LVNAFKDYGGNDR 258 ++ + D G R Sbjct: 262 MWEQIEDHDDLAGRPR 277 >gi|291514584|emb|CBK63794.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Alistipes shahii WAL 8301] Length = 279 Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 74/262 (28%), Positives = 116/262 (44%), Gaps = 26/262 (9%) Query: 9 SFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLS 68 + + ++GLS ++ DP++ L L A R E + ++G +FY R + Sbjct: 29 AAVAELSGLSPSALLTDPEAELAVEG---LEEAAARLAAGEPLQYVVGHTEFYGRRFAVR 85 Query: 69 SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128 PRPETE LVD+ L +R+ R+LD+GTG+G + +L P + D Sbjct: 86 EGVLIPRPETEELVDAILHG------EREARRLLDVGTGSGCIAASLALGMPGTEVFAAD 139 Query: 129 ISCKALEIAKSN------AVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182 IS AL +A N AVT ++ + L+ + FD IVSNPPY+ Sbjct: 140 ISDDALTVAAENFQQLGAAVTLRKADALNGLEEAFPER----FDAIVSNPPYVPESDRAA 195 Query: 183 LGLEVRDFDPRISL----DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238 + VRD +P ++L D D + YR IA + L G EI ++VR+ Sbjct: 196 MHPNVRDHEPGLALFVPDD---DAIRFYRAIARAGRQMLTPGGRLWFEIYERAAAEIVRM 252 Query: 239 FESRKLFLVNAFKDYGGNDRVL 260 + +D G R++ Sbjct: 253 LGAEGYTDTEVREDLFGKPRMV 274 >gi|33596609|ref|NP_884252.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Bordetella parapertussis 12822] gi|33601164|ref|NP_888724.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Bordetella bronchiseptica RB50] gi|33573310|emb|CAE37293.1| putative adenine-specific methylase [Bordetella parapertussis] gi|33575599|emb|CAE32677.1| putative adenine-specific methylase [Bordetella bronchiseptica RB50] Length = 298 Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 57/162 (35%), Positives = 84/162 (51%), Gaps = 10/162 (6%) Query: 74 PRPETELLVDSALAFSLPRI-EKRDVVRILDLGTGTGAVCLALLKES--PFFKGVGVDIS 130 PR L+D LA P + + V R LD+ TG+G CLA+L P + VD+S Sbjct: 109 PRSPIAELLDEGLA---PWVRDPLQVERALDMCTGSG--CLAILAALAFPVAQVDAVDVS 163 Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRD 189 ALE+A N G+ +R Q + F ++ +DVIV NPPY+ +D L E R Sbjct: 164 SDALEVAARNVAEYGLQDRLTLRQGNLFEALPAAAYDVIVCNPPYVNQASMDALPQEYR- 222 Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231 +P ++L GG DG+ R I +L+ DG+ +EIG+ + Sbjct: 223 HEPALALAGGADGMDLVRRILAAAPGYLSADGVLVLEIGHER 264 >gi|31615726|pdb|1NV8|A Chain A, N5-Glutamine Methyltransferase, Hemk gi|31615727|pdb|1NV8|B Chain B, N5-Glutamine Methyltransferase, Hemk gi|31615728|pdb|1NV9|A Chain A, Hemk, Apo Structure Length = 284 Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 76/220 (34%), Positives = 115/220 (52%), Gaps = 25/220 (11%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110 +H ILG ++F + + F PRPETE LV+ AL I K + + D+GTG+GA Sbjct: 81 LHYILGEKEFMGLSFLVEEGVFVPRPETEELVELALE----LIRKYGIKTVADIGTGSGA 136 Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF---DV 167 + +++ K S D+S KA+EIA+ NA +GVS+RF + ++ + F ++ Sbjct: 137 IGVSVAKFSDAIV-FATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEPFKEKFASIEM 195 Query: 168 IVSNPPYIES---VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224 I+SNPPY++S + D L F+P +L GG DGL YR R+ + Sbjct: 196 ILSNPPYVKSSAHLPKDVL------FEPPEALFGGEDGLDFYREF---FGRYDTSGKIVL 246 Query: 225 VEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 +EIG +Q ++ +I S +FL KD G R LL R Sbjct: 247 MEIGEDQVEELKKIV-SDTVFL----KDSAGKYRFLLLNR 281 >gi|300361413|ref|ZP_07057590.1| protein-(glutamine-N5) methyltransferase [Lactobacillus gasseri JV-V03] gi|300354032|gb|EFJ69903.1| protein-(glutamine-N5) methyltransferase [Lactobacillus gasseri JV-V03] Length = 280 Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 65/197 (32%), Positives = 103/197 (52%), Gaps = 14/197 (7%) Query: 50 SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109 S ILG+ FY ++ ++ PR ETE LV AL ++ EK ILDLGTG+G Sbjct: 67 SPQYILGYAWFYGYKILVNRGVLIPRFETEELVKWALE-NIKSGEK-----ILDLGTGSG 120 Query: 110 AVCLALLKESPFFKGVGV-----DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL 164 A+ +AL+K++ K + DI+ AL ++ N + + + T +++ +E Sbjct: 121 AIMVALVKQAQDQKIENLILYASDITDAALRESEENFLKYDLDVK--TRKANVLVGLEK- 177 Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224 FD IVSNPPYI++ + + V +P +L GG DGL YR A + HL G Sbjct: 178 FDTIVSNPPYIKTSEKNLMDANVIKNEPDTALYGGEDGLDFYRKFAKQIRSHLYSHGQFF 237 Query: 225 VEIGYNQKVDVVRIFES 241 +E +++K + +FE+ Sbjct: 238 LEFSFSEKDQLKDLFET 254 >gi|170288248|ref|YP_001738486.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Thermotoga sp. RQ2] gi|170175751|gb|ACB08803.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Thermotoga sp. RQ2] Length = 282 Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 75/220 (34%), Positives = 115/220 (52%), Gaps = 25/220 (11%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110 +H ILG ++F + L + F PRPETE LV+ AL I K + + D+GTG+GA Sbjct: 79 LHYILGEKEFMGLSLLVEEGVFVPRPETEELVELALE----LIRKYGIKAVADIGTGSGA 134 Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF---DV 167 + +++ K S D+S KA+E+A+ NA +GVS+RF + ++ + F ++ Sbjct: 135 IGVSVAKFSDVVV-FATDVSSKAVEVARKNAERHGVSDRFFVRKGEFLEPFKEKFASIEM 193 Query: 168 IVSNPPYIES---VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224 I+SNPPY++S + D L F+P +L GG DGL YR R+ + Sbjct: 194 ILSNPPYVKSSAHLPKDVL------FEPAEALFGGEDGLDFYREF---FGRYNTSGKIVL 244 Query: 225 VEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 +EIG +Q ++ +I S +FL KD G R L R Sbjct: 245 MEIGEDQVEELKKIV-SDAVFL----KDSAGKYRFLFLNR 279 >gi|220904892|ref|YP_002480204.1| modification methylase, HemK family [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219869191|gb|ACL49526.1| modification methylase, HemK family [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 305 Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 69/240 (28%), Positives = 103/240 (42%), Gaps = 19/240 (7%) Query: 38 LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97 L + R E + I G ++FY ++ T PRPETELLVD A+ + I+ D Sbjct: 57 LNTLLARRAAGEPLAHITGSKEFYGRDFAVTPHTLIPRPETELLVDKAIEAARKIIDAAD 116 Query: 98 VVRI----------------LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 + DLG G+G + + L E P ++GV VDIS +A++ A+ NA Sbjct: 117 RQGLRHAKTEGTPAGCGPCFADLGCGSGCIGITLALELPHWQGVLVDISPEAVQTARHNA 176 Query: 142 VTNGVSERFDTLQSDWFSS--VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199 + G R L D G + ++VSNPPYI + EV + +P +L Sbjct: 177 ASLGAQNRVWCLPGDMTRPPLARGAYTMLVSNPPYIAESERSMVMGEVLEHEPHSALFSP 236 Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN-AFKDYGGNDR 258 GL+H + L G+ +E G Q R+ LF +D G +R Sbjct: 237 RQGLAHLAAAIQAAAWALVPGGVLLLEHGAAQGAATRRLLREHDLFEAPVTHRDMAGLER 296 >gi|194368828|pdb|1SG9|A Chain A, Crystal Structure Of Thermotoga Maritima Protein Hemk, An N5-Glutamine Methyltransferase gi|194368829|pdb|1SG9|B Chain B, Crystal Structure Of Thermotoga Maritima Protein Hemk, An N5-Glutamine Methyltransferase gi|194368830|pdb|1SG9|C Chain C, Crystal Structure Of Thermotoga Maritima Protein Hemk, An N5-Glutamine Methyltransferase Length = 276 Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 76/220 (34%), Positives = 115/220 (52%), Gaps = 25/220 (11%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110 +H ILG ++F + + F PRPETE LV+ AL I K + + D+GTG+GA Sbjct: 72 LHYILGEKEFMGLSFLVEEGVFVPRPETEELVELALE----LIRKYGIKTVADIGTGSGA 127 Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF---DV 167 + +++ K S D+S KA+EIA+ NA +GVS+RF + ++ + F ++ Sbjct: 128 IGVSVAKFSDAIV-FATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEPFKEKFASIEM 186 Query: 168 IVSNPPYIES---VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224 I+SNPPY++S + D L F+P +L GG DGL YR R+ + Sbjct: 187 ILSNPPYVKSSAHLPKDVL------FEPPEALFGGEDGLDFYREF---FGRYDTSGKIVL 237 Query: 225 VEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 +EIG +Q ++ +I S +FL KD G R LL R Sbjct: 238 MEIGEDQVEELKKIV-SDTVFL----KDSAGKYRFLLLNR 272 >gi|227877272|ref|ZP_03995345.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Lactobacillus crispatus JV-V01] gi|256842835|ref|ZP_05548323.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Lactobacillus crispatus 125-2-CHN] gi|256848801|ref|ZP_05554235.1| protoporphyrinogen oxidase [Lactobacillus crispatus MV-1A-US] gi|262045801|ref|ZP_06018765.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Lactobacillus crispatus MV-3A-US] gi|293381670|ref|ZP_06627651.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Lactobacillus crispatus 214-1] gi|312977645|ref|ZP_07789392.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Lactobacillus crispatus CTV-05] gi|227863128|gb|EEJ70574.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Lactobacillus crispatus JV-V01] gi|256614255|gb|EEU19456.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Lactobacillus crispatus 125-2-CHN] gi|256714340|gb|EEU29327.1| protoporphyrinogen oxidase [Lactobacillus crispatus MV-1A-US] gi|260573760|gb|EEX30316.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Lactobacillus crispatus MV-3A-US] gi|290921717|gb|EFD98738.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Lactobacillus crispatus 214-1] gi|310895384|gb|EFQ44451.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Lactobacillus crispatus CTV-05] Length = 281 Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 66/219 (30%), Positives = 114/219 (52%), Gaps = 19/219 (8%) Query: 50 SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109 S ILG+ F ++ + PR ETE LV+ ++L ++ D ++LDLGTG+G Sbjct: 68 SPQYILGYAWFLGYKIMVQRGVLIPRFETEELVE----WALQTLKSGD--QVLDLGTGSG 121 Query: 110 AVCLALLKESPFFKGV------GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG 163 + +AL KE+ KG+ D++ AL ++ N +T + T +++ +E Sbjct: 122 CITVALAKEAQK-KGITDLTLYASDVTDTALRTSEENFLTYDLD--VTTRKANVLLGLEE 178 Query: 164 LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223 FD I+SNPPYI++ + + V +P+ +L G DGL Y+ A V HLN G Sbjct: 179 -FDKIISNPPYIKTSEKNVMDENVLQNEPKEALFAGKDGLDFYKKFAKQVREHLNSHGEF 237 Query: 224 SVEIGYNQKVDVVRIFESRKL--FLVNAFKDYGGNDRVL 260 +E G++++ + +F +++L F + KD G R++ Sbjct: 238 FLEFGFSEEEQLKELF-AKELPDFEIEFRKDMAGKPRMV 275 >gi|284032944|ref|YP_003382875.1| modification methylase, HemK family [Kribbella flavida DSM 17836] gi|283812237|gb|ADB34076.1| modification methylase, HemK family [Kribbella flavida DSM 17836] Length = 277 Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 65/240 (27%), Positives = 105/240 (43%), Gaps = 8/240 (3%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L V G+S Q+ + + Q L + R + E + + G F L Sbjct: 25 DAAELLAFVCGVSRLQLGLVDVTTAQQTQYDVLVD---RRAQREPLQHLTGTAAFRYREL 81 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 + F PRPETE+LV + L R++ + ++DL +G+GA+ A+ E P Sbjct: 82 VVGPGVFVPRPETEVLV----GWMLDRLKDVEAPLVVDLCSGSGAIAGAVATERPDSTVH 137 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185 V++S +A A+ N G + + ++G D +++NPPYI + + Sbjct: 138 AVELSPEACGWARRNLEGTGATLHEGDIDG-CLPELDGQVDAVIANPPYIPLTAWESVTA 196 Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245 EVRD DP ++L G DGL + +A R L G E Q +F + LF Sbjct: 197 EVRDHDPALALWSGDDGLDEIKVVAATAGRLLKPGGWFGCEHADVQGESAPAVFAATGLF 256 >gi|330502852|ref|YP_004379721.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Pseudomonas mendocina NK-01] gi|328917138|gb|AEB57969.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Pseudomonas mendocina NK-01] Length = 306 Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 68/215 (31%), Positives = 106/215 (49%), Gaps = 8/215 (3%) Query: 27 DSVLDDRQRFFLTNAIVRSLKHE-SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85 D L+D + L + R ++ +LG F + + PR L+D Sbjct: 60 DCRLEDDEHAHLQALLQRRIEERVPTAYLLGEAWFCGLPFVVDERVLVPRSPIAELIDRH 119 Query: 86 LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145 + LP IE RILDL TG+G + +A E P + V D+S +ALE+A N +G Sbjct: 120 FSPWLP-IEP---ARILDLCTGSGCIGIACAYEFPEAEVVLGDLSFEALEVANLNIERHG 175 Query: 146 VSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204 + ER +Q D F+ + G FD+IVSNPPY+++ + E + +P + L G DGL Sbjct: 176 LEERVYCVQGDGFAELPGQRFDLIVSNPPYVDAEDFADMPAEYQH-EPEMGLACGADGLD 234 Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 R + + HL + G+ VE+G N +V V ++ Sbjct: 235 LVRRMLAEAADHLTERGVLIVEVG-NSQVHVEALY 268 >gi|15643254|ref|NP_228298.1| hemK protein [Thermotoga maritima MSB8] gi|4980999|gb|AAD35573.1|AE001726_7 hemK protein [Thermotoga maritima MSB8] Length = 282 Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 76/220 (34%), Positives = 115/220 (52%), Gaps = 25/220 (11%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110 +H ILG ++F + + F PRPETE LV+ AL I K + + D+GTG+GA Sbjct: 79 LHYILGEKEFMGLSFLVEEGVFVPRPETEELVELALE----LIRKYGIKTVADIGTGSGA 134 Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF---DV 167 + +++ K S D+S KA+EIA+ NA +GVS+RF + ++ + F ++ Sbjct: 135 IGVSVAKFSDAIV-FATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEPFKEKFASIEM 193 Query: 168 IVSNPPYIES---VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224 I+SNPPY++S + D L F+P +L GG DGL YR R+ + Sbjct: 194 ILSNPPYVKSSAHLPKDVL------FEPPEALFGGEDGLDFYREF---FGRYDTSGKIVL 244 Query: 225 VEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 +EIG +Q ++ +I S +FL KD G R LL R Sbjct: 245 MEIGEDQVEELKKIV-SDTVFL----KDSAGKYRFLLLNR 279 >gi|160933138|ref|ZP_02080527.1| hypothetical protein CLOLEP_01981 [Clostridium leptum DSM 753] gi|156868212|gb|EDO61584.1| hypothetical protein CLOLEP_01981 [Clostridium leptum DSM 753] Length = 206 Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 67/205 (32%), Positives = 103/205 (50%), Gaps = 10/205 (4%) Query: 61 YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120 ++ L + PR +T LV ++ R++ ILDL GTGAV L + +E P Sbjct: 1 MDMELAVGPGVLIPREDTIPLVLE----TVQRLKNFSAPVILDLCAGTGAVGLGVARELP 56 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPYIE 176 K + V++S AL + N G R ++ D + +GL D +VSNPPYI Sbjct: 57 DAKVICVELSPLALPYLERNLSRYG-EGRVRAVKGDVLNGPDGLSLPLVDAVVSNPPYIC 115 Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236 + + L EVR +PR++LDGG DGLS YR I + L G+ +VEIG Q+ V Sbjct: 116 TGELPGLQKEVRQ-EPRLALDGGPDGLSFYRAITNNWLGLLKPGGVAAVEIGNGQENAVA 174 Query: 237 RIFESRKLFLVNAFKDYGGNDRVLL 261 + ++ + + +D G RV++ Sbjct: 175 DLLKTAGVSQITFSQDITGAIRVVI 199 >gi|254786508|ref|YP_003073937.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Teredinibacter turnerae T7901] gi|237684513|gb|ACR11777.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Teredinibacter turnerae T7901] Length = 305 Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 68/216 (31%), Positives = 113/216 (52%), Gaps = 19/216 (8%) Query: 21 QVIVDPDSVLDDRQRFFLTNAIVRSLKHE-SIHRILGWRDFYNVRLTLSSDTFEPR-PET 78 ++I D +D+++R F +AI R +K + I G F +R ++ + PR P Sbjct: 57 ELIYDTRLTVDEKKRVF--HAIGRRIKEKVPAAYITGEAIFGGLRFEVNENVLVPRSPIA 114 Query: 79 ELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS---CKALE 135 ELL++ + + D +LDL TG+G C+ +L S F+G VDIS AL Sbjct: 115 ELLLNGMHPWF-----QEDPASVLDLCTGSG--CIGILAAS-VFQGSEVDISDISASALA 166 Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEGL---FDVIVSNPPYIESVIVDCLGLEVRDFDP 192 +A N + + +R ++SD F++ + +D+I+SNPPY+++ + + E +P Sbjct: 167 VAARNIRNHELVDRVTAIESDLFNAPHFIGRKYDLILSNPPYVDAHDLSSMPAEYHA-EP 225 Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228 + L G DGLS R I S+HL ++GL VE+G Sbjct: 226 VLGLAAGNDGLSLARRILRDASKHLTRNGLLVVEVG 261 >gi|269793493|ref|YP_003312948.1| methylase of HemK family [Sanguibacter keddieii DSM 10542] gi|269095678|gb|ACZ20114.1| putative methylase of HemK family [Sanguibacter keddieii DSM 10542] Length = 275 Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 63/202 (31%), Positives = 93/202 (46%), Gaps = 14/202 (6%) Query: 38 LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97 L+ + R + E + +LGW + VR+ L+ F PR T LLV+ A A + P Sbjct: 44 LSTLLARRVAGEPLELVLGWAELAGVRVALAPGVFVPRQRTRLLVEQAAARARPGSV--- 100 Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV-TNGVSERFD---TL 153 +LDL GTGAV LA+ P + D+ A+ A+ N T+ V+ R Sbjct: 101 ---VLDLCCGTGAVGLAVALAVPGVELHASDLDPDAVACARLNVEDTSSVAPRHPQGTVY 157 Query: 154 QSDWFS----SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209 + D F S+ G DV+V N PY+ + V + E R + ++LDGG DGL R + Sbjct: 158 EGDLFDALPDSLRGRVDVLVVNAPYVPTAAVPLMPAEARVHEHLLALDGGSDGLEVQRRV 217 Query: 210 ADGVSRHLNKDGLCSVEIGYNQ 231 A L + G +E Q Sbjct: 218 AQRAGEWLARRGYLVIETSERQ 239 >gi|264678482|ref|YP_003278389.1| modification methylase, HemK family [Comamonas testosteroni CNB-2] gi|262208995|gb|ACY33093.1| modification methylase, HemK family [Comamonas testosteroni CNB-2] Length = 315 Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 55/168 (32%), Positives = 92/168 (54%), Gaps = 7/168 (4%) Query: 98 VVRILDLGTGTGAV-CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 V++LDL TG G++ CLA + P + G DIS AL +A+ N +G+ +R L+S+ Sbjct: 138 TVQVLDLCTGNGSLACLAAMA-YPEVRVTGADISTDALAVARINVDKHGLQDRVTLLESN 196 Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216 S V G +D+++ NPPY+ S + L E + +P ++L GG DG+ R + + + Sbjct: 197 GMSQVPGPWDLVLCNPPYVNSDSMGKLPAEYQ-AEPELALAGGADGMDFIRRLLEDLPAR 255 Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 L+KD + +EIG N+K F +F ++ G+++VLL Sbjct: 256 LSKDAVVVLEIG-NEKPYFEAAFPDLPVFWLDTSS---GDEQVLLITE 299 >gi|50365448|ref|YP_053873.1| polypeptide chain release factor methylase [Mesoplasma florum L1] gi|50364004|gb|AAT75989.1| polypeptide chain release factor methylase [Mesoplasma florum L1] Length = 300 Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 70/269 (26%), Positives = 134/269 (49%), Gaps = 15/269 (5%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ + +T + +V+ + VL+ +Q + + K + + ILG++ F ++ Sbjct: 37 DAIEIISFITKIEYSEVLFSQEKVLNKKQFKKIIKISKKLAKGKPLAYILGYKIFRTHKI 96 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG--AVCLALLKESPFFK 123 ++ +T PR ETEL+VD F + EK + +LDL G+G + +A+ + Sbjct: 97 LVNKNTLIPRMETELIVDYVNEFINSQNEK---ISVLDLCCGSGCIGISIAIENKDKMEN 153 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIV 180 DIS KAL I N N + ++SD+ +S+ + F+++V NPPYI+ V Sbjct: 154 VTFSDISKKALNITSKNIENNNLVNWTKVVKSDFLNSIIKQQNKFNILVCNPPYIDFNDV 213 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN--KDGLCSVEIGYNQKVDVVRI 238 D + + ++P+++L +GL Y+ + + ++ K+ L EIG+ Q+ + + + Sbjct: 214 DVDKM-TKKYEPKLALFAKDNGLFFYKEAIKNIDKFMDITKNILIVFEIGWKQEKE-LDV 271 Query: 239 FESRKLFLVNAF---KDYGGNDRVLLFCR 264 F ++L L + KDY N R L+ + Sbjct: 272 FLKQELGLKYKWKFEKDYFNNLRYLILTK 300 >gi|115763476|ref|XP_001201549.1| PREDICTED: similar to HEMK homolog, partial [Strongylocentrotus purpuratus] gi|115953212|ref|XP_791896.2| PREDICTED: similar to HEMK homolog, partial [Strongylocentrotus purpuratus] Length = 390 Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 69/225 (30%), Positives = 107/225 (47%), Gaps = 29/225 (12%) Query: 24 VDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVD 83 +D +L +R + + L + ILG DF ++ L + + F PRPETE+LVD Sbjct: 117 IDQSRILSTEERSRVMELASQKLARVPMQYILGEWDFRDLTLKMKAPVFIPRPETEMLVD 176 Query: 84 SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV-------------GVDIS 130 +++ E+ D + IL++G G+GA+ L+LL E F K V +D S Sbjct: 177 LLVSY----YEEDDELDILEVGCGSGAIGLSLLHE--FQKNVLSMFNFHLLAHVTAIDAS 230 Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDW--------FSSVEGLFDVIVSNPPYIESVIVDC 182 A+ + + NA GVS R + S +DVIVSNPPY+ + +D Sbjct: 231 RDAVMLTQDNASRLGVSNRLSVHHTALTDESPLRIHSKYGTRYDVIVSNPPYLFTRDMDD 290 Query: 183 LGLEV-RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE 226 LG E+ R+ DP ++LD G +G+ + I L G +E Sbjct: 291 LGPEILRNEDP-MALDAGAEGMDVIKAIVKHARFLLKPRGFIWLE 334 >gi|28869244|ref|NP_791863.1| modification methylase, HemK family [Pseudomonas syringae pv. tomato str. DC3000] gi|28852485|gb|AAO55558.1| modification methylase, HemK family [Pseudomonas syringae pv. tomato str. DC3000] Length = 302 Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 60/179 (33%), Positives = 91/179 (50%), Gaps = 6/179 (3%) Query: 54 ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113 +LG F + + PR L++ A L + RILDL TG+G + + Sbjct: 86 LLGEAWFCGMSFIVDDRVLIPRSPIAELIEERFAPWL----ASEPARILDLCTGSGCIGI 141 Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNP 172 A E P + D+S ALE+A N +G+ +R T+Q D F + G FD+IVSNP Sbjct: 142 ACADEFPDAEVALADLSYDALEVASLNIERHGMDDRVYTVQGDGFDGLPGQRFDLIVSNP 201 Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231 PY+++ + E + +P ++L G DGLS R + + HLN+ GL VE+G +Q Sbjct: 202 PYVDAEDFADMPDEYQ-HEPELALACGSDGLSLVRRMLAQAADHLNEKGLLIVEVGNSQ 259 >gi|157821261|ref|NP_001100323.1| hemK methyltransferase family member 1 [Rattus norvegicus] gi|149018619|gb|EDL77260.1| HemK methyltransferase family member 1 (predicted) [Rattus norvegicus] gi|171847399|gb|AAI61944.1| HemK methyltransferase family member 1 [Rattus norvegicus] Length = 340 Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 71/231 (30%), Positives = 112/231 (48%), Gaps = 19/231 (8%) Query: 46 LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL---AFSLPRIEKRDVVRIL 102 L+ + ILG DF + L ++ F PRPETE LV+ L A P + +D IL Sbjct: 106 LQRMPVQYILGEWDFQGLNLKMAPPVFIPRPETEELVEWVLEEVAQRPPAVRAQDGPLIL 165 Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS-- 160 ++G G+GA+ L+LL + P + + VD A+ + NA + +R + D S Sbjct: 166 EVGCGSGAIALSLLSQLPKTQVIAVDKEEAAVSLTLENAQRLQLQDRIRIIHLDITSEGC 225 Query: 161 -----VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL---SHYRTIADG 212 G D++VSNPPYI ++ L E+R ++ ++LDGG +G+ +H T+A Sbjct: 226 CTHLLPWGPMDLVVSNPPYIFRKDMEQLAPEIRSYEDLVALDGGDEGMDIITHILTLAPW 285 Query: 213 VSRHLNKDGLCSVEIGYNQKVDVVRIFESRK---LFLVNAFKDYGGNDRVL 260 + LN G +E+ V +S+ L LV +D+ G R L Sbjct: 286 L---LNASGSIFLEVDPRHPELVSSWLQSQPDLHLSLVGVREDFCGRPRFL 333 >gi|311109117|ref|YP_003981970.1| methyltransferase [Achromobacter xylosoxidans A8] gi|310763806|gb|ADP19255.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Achromobacter xylosoxidans A8] Length = 274 Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 73/221 (33%), Positives = 112/221 (50%), Gaps = 15/221 (6%) Query: 44 RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103 R L E + +LG R+F R ++ D PRP+TE+LV++AL + +LD Sbjct: 57 RRLAGEPMAYLLGHREFMGHRFRVTPDVLIPRPDTEVLVETALEC----LAGLAAPAVLD 112 Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-- 161 LGTG+GA+ +++ + + D+S AL +A +NA S R ++ W+ +V Sbjct: 113 LGTGSGAIAISIALARRDARVMASDLSAAALAVAAANAWDLAASVRL--VEGSWYQAVPA 170 Query: 162 -EGLFDVIVSNPPYIESVIVDCLGLEVRD--FDPRISLDGGIDGLSHYRTIADGVSRHLN 218 EG FD+IVSNPPY V D L+ D F+PR +L G GL I G RHL Sbjct: 171 GEG-FDLIVSNPPY---VACDDPHLDQGDVRFEPRGALTDGAGGLEDLARIVQGAGRHLK 226 Query: 219 KDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRV 259 + G +E G++Q V + V++ +D G +R+ Sbjct: 227 RGGALWLEHGWDQAQAVRDQLAAAGFQDVHSRRDLAGIERI 267 >gi|145222896|ref|YP_001133574.1| HemK family modification methylase [Mycobacterium gilvum PYR-GCK] gi|315443361|ref|YP_004076240.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Mycobacterium sp. Spyr1] gi|145215382|gb|ABP44786.1| modification methylase, HemK family [Mycobacterium gilvum PYR-GCK] gi|315261664|gb|ADT98405.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Mycobacterium sp. Spyr1] Length = 289 Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 76/243 (31%), Positives = 106/243 (43%), Gaps = 13/243 (5%) Query: 24 VDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVD 83 V+PD+ R R + R + + G F V + + F PRPETE L++ Sbjct: 51 VEPDAAFLSRYR----DLTARRAARVPLQHLTGTAAFGPVVVDVGPGVFIPRPETESLLE 106 Query: 84 SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143 ALA L RI+DL TG+GA+ LAL + P VD S AL + N Sbjct: 107 WALAQPL-----SGSARIVDLCTGSGALALALAQGFPGATVFAVDDSDDALVYTRRNTAG 161 Query: 144 NGVSE-RFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202 V R D + + ++ D++VSNPPYI L EV + DP +L GG DG Sbjct: 162 TAVHVVRADVTDAGLLTELDRSVDLLVSNPPYIPDAAE--LEPEVAEHDPAHALYGGADG 219 Query: 203 LSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL-VNAFKDYGGNDRVLL 261 ++ +A +R L G C+VE + V +F F V A D G R + Sbjct: 220 MAVIEHLAGVAARLLRPGGRCAVEHDDSTSQATVEVFVRAGGFTEVTARHDLTGRPRFVT 279 Query: 262 FCR 264 R Sbjct: 280 AVR 282 >gi|296128916|ref|YP_003636166.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Cellulomonas flavigena DSM 20109] gi|296020731|gb|ADG73967.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Cellulomonas flavigena DSM 20109] Length = 304 Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 73/229 (31%), Positives = 105/229 (45%), Gaps = 11/229 (4%) Query: 44 RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103 R E + I+G F V L + F PRPETE + A+ + + ++D Sbjct: 68 RRRSREPLQHIVGHTVFRYVTLRVEPGVFVPRPETETVAQLAVDEAAAVAARGGSPLVVD 127 Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER-FDTLQSD-----W 157 L TGTGA+ +++ E + V VD+S +A+ +A+ NA V+ R +Q D Sbjct: 128 LCTGTGAIAVSVDTEVAASRVVAVDLSDEAVGLARHNA--GAVASRALRVVQGDVRDPAL 185 Query: 158 FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL-DGGIDGLSHYRTIADGVSRH 216 + ++G DV+VSNPPYI V L EVRD DP ++L GG DGL R + +R Sbjct: 186 LAELDGTVDVVVSNPPYIPPDAV-PLDPEVRDHDPDLALYGGGSDGLDVPRAVIAAAARL 244 Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRKLFL-VNAFKDYGGNDRVLLFCR 264 L GL +E Q + F V D G R L+ R Sbjct: 245 LAPGGLLVMEHAEVQDAQARAAAAATGAFEDVRTVPDLTGRPRTLVARR 293 >gi|206896464|ref|YP_002247174.1| protoporphyrinogen oxidase [Coprothermobacter proteolyticus DSM 5265] gi|206739081|gb|ACI18159.1| protoporphyrinogen oxidase [Coprothermobacter proteolyticus DSM 5265] Length = 266 Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 73/257 (28%), Positives = 117/257 (45%), Gaps = 16/257 (6%) Query: 8 HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67 ++ + V G+S V +D D ++D+ + I ++ I G+ FY + Sbjct: 24 YNLISYVFGVSKIDVALDKDIIVDEGE---FRRVIYLLGENVPFAYITGYEAFYGRDFYV 80 Query: 68 SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 F PR ETELLV+ AL K LD GTG+GA+ ++LL E+P +GV V Sbjct: 81 LPGVFIPRNETELLVELAL--------KEPFNSFLDFGTGSGAIAISLLLENPKSQGVAV 132 Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEV 187 +IS K NA V R + + G+FD+I+SNPPY+ + + + V Sbjct: 133 EISHVGQLCTKYNAEKFEVQNRLAIVST---LPENGMFDLIISNPPYVAYELFEEVDYSV 189 Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLV 247 + F+P ++ D + +R I HL+ G +EI + D+ ++ S F Sbjct: 190 KAFEPLQAVFPE-DPVLVFRDILTYSLSHLSDAGRVILEIDSYVESDLQKLASSLG-FYY 247 Query: 248 NAFKDYGGNDRVLLFCR 264 KD DR+ + R Sbjct: 248 QVTKDLSQFDRICILSR 264 >gi|189462017|ref|ZP_03010802.1| hypothetical protein BACCOP_02689 [Bacteroides coprocola DSM 17136] gi|189431231|gb|EDV00216.1| hypothetical protein BACCOP_02689 [Bacteroides coprocola DSM 17136] Length = 280 Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 72/226 (31%), Positives = 107/226 (47%), Gaps = 9/226 (3%) Query: 38 LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97 L + + R ++E + ILG DF + ++ PRPET L+D ++ + Sbjct: 56 LEDILSRLKRYEPLQYILGKVDFCGLPFEVAPGALIPRPETAELIDWIIS----DYTDKA 111 Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 VRILD+GTG+G + + L K+ K D+S KAL+IA+ N + N V Q D Sbjct: 112 GVRILDVGTGSGCIPIVLGKKLKQSKITSWDVSEKALDIARRNKLLNQVD--ITLAQVDI 169 Query: 158 FSSV--EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL-DGGIDGLSHYRTIADGVS 214 F + + DV+VSNPPYI + V D++P ++L D L YR IA+ Sbjct: 170 FDTALPDIHVDVLVSNPPYITEKERSGMERNVLDWEPELALFVPDSDPLLFYRRIAEVGC 229 Query: 215 RHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 L G EI + V++ E V KD GNDR++ Sbjct: 230 DILVSGGTLYYEINRAYGKETVQLLEGMGYQSVELRKDMFGNDRMI 275 >gi|314934186|ref|ZP_07841547.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Staphylococcus caprae C87] gi|313653091|gb|EFS16852.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Staphylococcus caprae C87] Length = 278 Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 63/226 (27%), Positives = 104/226 (46%), Gaps = 12/226 (5%) Query: 41 AIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR 100 A+ R L E I I+G++ FY + ++ PRPETE + L + +D V Sbjct: 59 ALHRMLSGEPIQYIVGFQSFYGYTFEVDNNCLIPRPETE----EVMLHFLNQCHHQDTVA 114 Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 D+GTG+GA+ + L P + D+ L +A++NA + +F LQ D Sbjct: 115 --DIGTGSGAIAITLKLLKPDLNVLATDLYEDTLNVARNNATLHQQEIQF--LQGDALKP 170 Query: 161 V---EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217 + D ++SNPPYI+ + V ++P +L +G + Y I + + + Sbjct: 171 LIDNNIKVDGLISNPPYIDECEARDMDDTVLKYEPHHALFAENEGYAIYEGILKDLPQVM 230 Query: 218 NKDGLCSVEIGYNQKVDVVRIFESRKL-FLVNAFKDYGGNDRVLLF 262 + G EIGYNQ + + S LV +D GN+R++ F Sbjct: 231 KEQGHVVFEIGYNQGNQLKALINSMYPDKLVKVIRDINGNERIVSF 276 >gi|226944463|ref|YP_002799536.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Azotobacter vinelandii DJ] gi|226719390|gb|ACO78561.1| Modification methylase [Azotobacter vinelandii DJ] Length = 306 Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 62/187 (33%), Positives = 93/187 (49%), Gaps = 7/187 (3%) Query: 54 ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113 +LG F + + PR L+ A LP + RILDL TG+G + + Sbjct: 88 LLGEAWFCGLPFLVDERVLVPRSPIAELIGQRFAPWLPH----EPTRILDLCTGSGCIGI 143 Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNP 172 A E P + V D+S ALE+A N + + ER T+Q D F+ + G FD+IVSNP Sbjct: 144 ACAHEFPGAEVVLADLSFDALEVANRNIERHALDERVYTVQGDGFAGLPGQRFDLIVSNP 203 Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232 PY+++ + E R +P + L G DGL R + + HL + G+ VE+G N + Sbjct: 204 PYVDAEDFADMPEEYR-HEPAMGLACGEDGLDLVRRMLAEAADHLTERGVLIVEVG-NSQ 261 Query: 233 VDVVRIF 239 V V ++ Sbjct: 262 VHVETLY 268 >gi|124002114|ref|ZP_01686968.1| protoporphyrinogen oxidase [Microscilla marina ATCC 23134] gi|123992580|gb|EAY31925.1| protoporphyrinogen oxidase [Microscilla marina ATCC 23134] Length = 288 Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 64/227 (28%), Positives = 103/227 (45%), Gaps = 9/227 (3%) Query: 38 LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97 L NA+ R ++E I I +FY + + PRPETE LV A+ + + + Sbjct: 60 LDNALRRLQQYEPIQYITKQAEFYGLPFRVKPGVLIPRPETEELV----AWIIQDFQSQP 115 Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQ 154 + +LD+GTG+G + + L K P + +D+S +AL IA+ NA N V+ ++ + L Sbjct: 116 LT-LLDIGTGSGCIAVTLAKNMPQAQVNALDVSNEALTIAQQNAALNKVNIQWIAHNILA 174 Query: 155 SDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL-DGGIDGLSHYRTIADGV 213 + + DVIVSNPPY+ + V +P ++L + L Y I Sbjct: 175 PSFTHFADQSLDVIVSNPPYVTPAEQAQMHENVLKHEPALALFVPQNEPLLFYEAITQVA 234 Query: 214 SRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 + L G EI ++ E + V KD G DR++ Sbjct: 235 RQKLKPQGALYFEINEQFGAITKKMIEQQGFQEVEVRKDLFGKDRMV 281 >gi|329943004|ref|ZP_08291778.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Chlamydophila psittaci Cal10] gi|332287586|ref|YP_004422487.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Chlamydophila psittaci 6BC] gi|313848160|emb|CBY17161.1| conserved hypothetical protein [Chlamydophila psittaci RD1] gi|325506596|gb|ADZ18234.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Chlamydophila psittaci 6BC] gi|328814551|gb|EGF84541.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Chlamydophila psittaci Cal10] gi|328914837|gb|AEB55670.1| HemK protein [Chlamydophila psittaci 6BC] Length = 283 Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 65/209 (31%), Positives = 96/209 (45%), Gaps = 6/209 (2%) Query: 54 ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113 I G F + L + S PR ETELL + + + + + D+ G+G + L Sbjct: 71 IHGSVRFLELDLEVDSRVLIPRMETELLAEKIIQY---LTQHSHIQTFYDVCCGSGCLGL 127 Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173 ++ K P K V DI KA+ +AK NA N + + D L+ D F+ D V NPP Sbjct: 128 SIKKYCPNVKVVLSDICPKAVAVAKINASKNNL--KVDVLEGDLFAPFSCPADAFVCNPP 185 Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233 Y+ + EVR +P +L GG GL Y IA + L+ G+ +EIGY Q Sbjct: 186 YLSFDEIMRTDPEVRCHEPWKALVGGSSGLEFYERIARDLDAVLHPGGVGWLEIGYRQGE 245 Query: 234 DVVRIFESRKLFLVNAFKDYGGNDRVLLF 262 V RIF + + + +D DR+ Sbjct: 246 AVKRIFANHGV-CGSIHQDLSACDRIFFL 273 >gi|289663510|ref|ZP_06485091.1| protein methyltransferase HemK (Protein-glutamine N-methyltransferase hemK) (Protein-(glutamine-N5) MTase [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 281 Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 72/222 (32%), Positives = 107/222 (48%), Gaps = 7/222 (3%) Query: 41 AIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR 100 ++ R E + + G R F+ + L +S T PR +TELLV+ +L R + R R Sbjct: 60 SVQRREAGEPVAYLTGSRGFWTLDLAVSPATLIPRADTELLVE----LALERFDTRPGRR 115 Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 DLGTG+GA+ LA+ E P + + D S AL +A+ NA + + D WF Sbjct: 116 AADLGTGSGAIALAISSERPQAQVIATDASAAALAMARRNAHKHDL-RNVDFRLGHWFGP 174 Query: 161 VEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 + G FD+I SNPPYI + ++R ++P +L G DGL R I HL Sbjct: 175 LAGEAFDLIASNPPYIAAHDPHLQQGDLR-YEPASALASGSDGLDDIRLIVADAPAHLLP 233 Query: 220 DGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 G +E G++Q V + + V ++D DRV L Sbjct: 234 SGWLLLEHGWDQGAVVRALLAAAGFDTVATYRDLEARDRVTL 275 >gi|148269572|ref|YP_001244032.1| HemK family modification methylase [Thermotoga petrophila RKU-1] gi|147735116|gb|ABQ46456.1| modification methylase, HemK family [Thermotoga petrophila RKU-1] Length = 282 Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 75/220 (34%), Positives = 114/220 (51%), Gaps = 25/220 (11%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110 +H ILG ++F + L + F PRPETE LV+ AL I K + + D+GTG+GA Sbjct: 79 LHYILGEKEFMGLSLLVEEGVFVPRPETEELVELALE----LIRKYGIKAVADIGTGSGA 134 Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF---DV 167 + +++ K S D+S KA+E+A+ NA +GVS+RF + + + F ++ Sbjct: 135 IGVSVAKFSDVVV-FATDVSSKAVEVARKNAERHGVSDRFFVRKGELLEPFKEKFASIEM 193 Query: 168 IVSNPPYIES---VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224 I+SNPPY++S + D L F+P +L GG DGL YR R+ + Sbjct: 194 ILSNPPYVKSSAHLPKDVL------FEPAEALFGGEDGLDFYREF---FGRYNTSGKIVL 244 Query: 225 VEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 +EIG +Q ++ +I S +FL KD G R L R Sbjct: 245 MEIGEDQVEELKKIV-SDAVFL----KDSAGKYRFLFLNR 279 >gi|27382585|ref|NP_774114.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Bradyrhizobium japonicum USDA 110] gi|27355757|dbj|BAC52739.1| hypothetical adenine-specific methylase [Bradyrhizobium japonicum USDA 110] Length = 319 Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 52/139 (37%), Positives = 78/139 (56%), Gaps = 6/139 (4%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVSERFDTLQS 155 V R+LDL TG+G CLA+L F VDIS ALE+A N +G+ ER + Sbjct: 153 VERVLDLCTGSG--CLAILAAYHFPNATVDAVDISKGALEVAARNVGEHGLDERVTLHRG 210 Query: 156 DWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214 D F+ + + +D+I++NPPY+++ + L E R +P+++ DGG+DGL R I Sbjct: 211 DLFAPLGDNRYDLIITNPPYVDAEGMAALPPECR-AEPKLAFDGGVDGLDVVRRILRDAP 269 Query: 215 RHLNKDGLCSVEIGYNQKV 233 HL DG EIG +++ Sbjct: 270 EHLTPDGGLICEIGRGREL 288 >gi|120611152|ref|YP_970830.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Acidovorax citrulli AAC00-1] gi|120589616|gb|ABM33056.1| [LSU ribosomal protein L3P]-glutamine N5-methyltransferase [Acidovorax citrulli AAC00-1] Length = 309 Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 52/164 (31%), Positives = 82/164 (50%), Gaps = 5/164 (3%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LDL TG G++ + P + G D+S AL++A+ N +G+ R SD S+ Sbjct: 139 VLDLCTGNGSLAVLAAMAYPDVRVTGADLSPDALDVARINVERHGLEGRVALALSDGLSA 198 Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220 V G +D+I+ NPPY+ + + L E R +P ++L GG DG+ R + L +D Sbjct: 199 VPGPWDLILCNPPYVNAASMAALPQEYR-AEPELALAGGADGMDFVRRLLADAPAALRED 257 Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 G+ +EIG N++ F F + G D+VLL R Sbjct: 258 GVLILEIG-NERAHFEAAFPHLPAFW---LETSAGEDQVLLLTR 297 >gi|254821299|ref|ZP_05226300.1| modification methylase, HemK family protein [Mycobacterium intracellulare ATCC 13950] Length = 308 Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 73/231 (31%), Positives = 107/231 (46%), Gaps = 13/231 (5%) Query: 40 NAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV 99 +A+ + + +LG F V+L + F PRPETE L++ A A R+ R V Sbjct: 64 DAVAVRSRRVPLQHLLGTAAFGPVQLRVGPGVFIPRPETEALLEWARAQ---RLAPRPV- 119 Query: 100 RILDLGTGTGAVCLALLKESPFF----KGVGVDISCKALEIAKSNAVTNGVS-ERFDTLQ 154 I+DL TG+GA+ +AL + + V +D S ALE A+ NA + R D + Sbjct: 120 -IVDLCTGSGALAVALAHQRAELGQEARIVALDNSDAALEYARGNAEGTAIEIVRADVTE 178 Query: 155 SDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214 ++G D+IV+NPPY+ V L EV DP ++ GG DGL+ I Sbjct: 179 PGVLPQLDGRVDLIVANPPYVPDGAV--LDPEVAQHDPYQAVFGGPDGLAVIAPIVRLAG 236 Query: 215 RHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL-VNAFKDYGGNDRVLLFCR 264 R L GL +E + + +F LF V A +D G R + R Sbjct: 237 RWLRPGGLIGIEHDDTTSRETMELFVRTGLFEDVQARQDLTGRPRFVTARR 287 >gi|223043926|ref|ZP_03613967.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Staphylococcus capitis SK14] gi|222442641|gb|EEE48745.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Staphylococcus capitis SK14] Length = 278 Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 63/226 (27%), Positives = 105/226 (46%), Gaps = 12/226 (5%) Query: 41 AIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR 100 A+ R L E I I+G++ FY + ++ PRPETE + L + +D V Sbjct: 59 ALHRMLSGEPIQYIVGFQSFYGYTFEVDNNCLIPRPETE----EVMLHFLNQCHHQDTVA 114 Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 D+GTG+GA+ + L P + D+ L +A++NA + +F LQ D Sbjct: 115 --DIGTGSGAIAITLKLLKPDLNVLATDLYEDTLNVARNNATLHQQEIQF--LQGDALKP 170 Query: 161 V---EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217 + + D ++SNPPYI+ + V ++P +L +G + Y I + + + Sbjct: 171 LIDNDIKVDGLISNPPYIDEGEARDMDDTVLKYEPHHALFAENEGYAIYEGILKDLPQVM 230 Query: 218 NKDGLCSVEIGYNQKVDVVRIFESRKL-FLVNAFKDYGGNDRVLLF 262 + G EIGYNQ + + S LV +D GN+R++ F Sbjct: 231 KEQGHVVFEIGYNQGNQLKALINSMYPDKLVKVIRDINGNERIVSF 276 >gi|110003949|emb|CAK98289.1| putative s-adenosyl-methionine-dependent methyltransferase protein [Spiroplasma citri] Length = 291 Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 55/200 (27%), Positives = 99/200 (49%), Gaps = 13/200 (6%) Query: 49 ESIHRILGWRDFYNVRLTLSSDTFEPRPETE-------LLVDSALAFSLPRIEKRDVVRI 101 + I I ++FY + + PR ETE +++D + + + + Sbjct: 67 KPIQHITNLQNFYGYDFYVDYNVLIPRYETEELVDNINIIIDEMFLNNCNKRNCNKRLTL 126 Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW---F 158 +D+GTG+GA+ ++L E+P DIS +AL++AK N + + L+ D F Sbjct: 127 IDIGTGSGAIAISLGLENPNLTIYASDISIEALKVAKRN-IKQLNCKNVKLLEGDMLEPF 185 Query: 159 SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 + D++V NPPYI + + V++++P ++L G DGL YR I + + Sbjct: 186 IKNKIKADLLVCNPPYIPNN--QKISHHVKNYEPHVALFGDADGLYFYREIFQNWQKVVK 243 Query: 219 KDGLCSVEIGYNQKVDVVRI 238 K+G+ E GY+QK D+ ++ Sbjct: 244 KNGILCFEHGYDQKKDLEKL 263 >gi|294340107|emb|CAZ88478.1| putative S-adenosyl-L-methionine-dependent methyltransferases /Modification methylase HemK [Thiomonas sp. 3As] Length = 324 Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 62/241 (25%), Positives = 103/241 (42%), Gaps = 19/241 (7%) Query: 17 LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRP 76 +S H P L Q L I R + E I + GW+ F + L S + PR Sbjct: 65 MSLHAAAETPLVALSAAQLEALDGLIERRVAGEPIAYLTGWQRFMGLELRASPEALIPRA 124 Query: 77 ETELLVDSAL--------AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128 E+ELL A A + P I ++D+ G+G + LAL P + G D Sbjct: 125 ESELLGQIAAQKLRSMAEAAATPPI-------VIDVCCGSGNLALALAHAVPQAQVHGAD 177 Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV----EGLFDVIVSNPPYIESVIVDCLG 184 IS A+++A++N + +R D + +G D++VS PPYI + +D + Sbjct: 178 ISQTAIDLARANTQNLDLGQRVSLHTGDLLAPFGAEFQGKVDLVVSLPPYISTAKLDTMP 237 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 E+ +P ++ DGG G+ + L G +E+G Q ++++ E Sbjct: 238 HEIVGHEPHLAFDGGPFGVRILMRLIREAPPLLRPGGWLGMEVGLGQGPAMMQLLEKHPA 297 Query: 245 F 245 + Sbjct: 298 Y 298 >gi|330876113|gb|EGH10262.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 302 Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 65/202 (32%), Positives = 100/202 (49%), Gaps = 8/202 (3%) Query: 54 ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113 +LG F + + PR L++ A L + RILDL TG+G + + Sbjct: 86 LLGEAWFCGMSFIVDDRVLIPRSPIAELIEERFAPWL----ASEPARILDLCTGSGCIGI 141 Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNP 172 A E P + D+S ALE+A N +G+ +R T+Q D F + G FD+IVSNP Sbjct: 142 ACADEFPDAEVALADLSYDALEVASLNIERHGMDDRVYTVQGDGFDGLPGQRFDLIVSNP 201 Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232 PY+++ + E + +P ++L G DGL+ R + + HLN+ GL VE+G N + Sbjct: 202 PYVDAEDFADMPDEYQ-HEPELALACGSDGLNLVRRMLAQAADHLNEKGLLIVEVG-NSQ 259 Query: 233 VDVVRIFESRKLFLVNAFKDYG 254 V V ++ +N FK G Sbjct: 260 VHVQALYPEVDFAWLN-FKRGG 280 >gi|119714686|ref|YP_921651.1| HemK family modification methylase [Nocardioides sp. JS614] gi|119535347|gb|ABL79964.1| modification methylase, HemK family [Nocardioides sp. JS614] Length = 299 Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 59/197 (29%), Positives = 93/197 (47%), Gaps = 12/197 (6%) Query: 38 LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97 L + R + E + ++LG+ +F +R+ + F PR T LL A+ +E D Sbjct: 50 LAAMVARRVAGEPLEQVLGFAEFLGLRVAVEPGVFVPRLRTTLLARRAIRA----LEPGD 105 Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER--FDTLQS 155 + +DL GTGA+ +ALL P + DI A+ A+ N + V E +D L Sbjct: 106 LA--VDLCCGTGAIGVALLAAVPGAEVHAADIDPAAVRCARRNLPPDRVHEGDLYDALPG 163 Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215 + + G V+V+N PY+ + + + E RD + R++LDGG DGL R + G Sbjct: 164 E----LRGRVAVVVANAPYVPTGAIATMPPEARDHEHRVALDGGADGLEVARRVIAGARP 219 Query: 216 HLNKDGLCSVEIGYNQK 232 L G VE Q+ Sbjct: 220 WLAPGGRVLVETSAAQR 236 >gi|92118609|ref|YP_578338.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Nitrobacter hamburgensis X14] gi|91801503|gb|ABE63878.1| [LSU ribosomal protein L3P]-glutamine N5-methyltransferase [Nitrobacter hamburgensis X14] Length = 343 Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 50/134 (37%), Positives = 73/134 (54%), Gaps = 6/134 (4%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVSERFDTLQS 155 V R+LDL TG+G CLA+L F D+S AL +A+ N + + +R Q Sbjct: 165 VTRVLDLCTGSG--CLAILAARAFPNATVDAADLSADALTVAERNVQEHRLEDRIQLAQG 222 Query: 156 DWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214 D F++V G +D+I+SNPPY+++ + L E +PR++ DGG DG+ R I DG Sbjct: 223 DLFAAVSGKRYDLIISNPPYVDAQGMASLPHECL-AEPRMAFDGGADGIDLVRRIIDGAK 281 Query: 215 RHLNKDGLCSVEIG 228 HL G E+G Sbjct: 282 THLASGGGLLCEVG 295 >gi|33241450|ref|NP_876391.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Chlamydophila pneumoniae TW-183] gi|33235958|gb|AAP98048.1| protoporphyrinogen oxidase [Chlamydophila pneumoniae TW-183] Length = 296 Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 60/207 (28%), Positives = 97/207 (46%), Gaps = 6/207 (2%) Query: 56 GWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL 115 G F +RL + S PR ETELL + + + L E + D+ G+G + LA+ Sbjct: 82 GAVSFLGLRLRVDSRVLIPRTETELLAEYIINYLLSHSE---IQTFYDICCGSGCLGLAI 138 Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYI 175 K P + V D+ +A+ +A NA +NG+ + L D + D V NPPY+ Sbjct: 139 KKSCPHVEVVLSDVCPQAVAVANENAKSNGLDVKI--LLGDLSAPYTRPADAFVCNPPYL 196 Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235 + + EVR ++P +L GG GL Y+ IA + + + G+ +EIG +Q + Sbjct: 197 SFNEIIHIDPEVRCYEPWKALVGGSTGLEFYQRIAQELPKIVTSTGVGWLEIGSSQGESI 256 Query: 236 VRIFESRKLFLVNAFKDYGGNDRVLLF 262 IF ++ +D G DR+ Sbjct: 257 KNIFSKHGIY-GRLHQDLSGRDRIFFL 282 >gi|115522953|ref|YP_779864.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Rhodopseudomonas palustris BisA53] gi|115516900|gb|ABJ04884.1| modification methylase, HemK family [Rhodopseudomonas palustris BisA53] Length = 340 Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 51/139 (36%), Positives = 76/139 (54%), Gaps = 6/139 (4%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVSERFDTLQS 155 V +LDL TG+G CLA+L F VD+S AL +A N +G+ +R Sbjct: 175 VENVLDLCTGSG--CLAILASRHFHNAHVDAVDLSKDALAVAARNVAEHGLDDRIALHHG 232 Query: 156 DWFSSVEGLF-DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214 D F+ ++G++ D+I+SNPPY+++ + L E R +P+++ DGG DGL R I DG Sbjct: 233 DLFAPLQGMYYDLIISNPPYVDAEGMAGLPPECR-AEPKMAFDGGEDGLDIVRRILDGAR 291 Query: 215 RHLNKDGLCSVEIGYNQKV 233 HL G EIG ++ Sbjct: 292 MHLQPHGGLLCEIGRGREA 310 >gi|212635903|ref|YP_002312428.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Shewanella piezotolerans WP3] gi|212557387|gb|ACJ29841.1| Modification methylase HemK [Shewanella piezotolerans WP3] Length = 314 Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 66/194 (34%), Positives = 103/194 (53%), Gaps = 12/194 (6%) Query: 74 PR-PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCK 132 PR P EL+ + FS P + + V R++DL TG+G + +A E + +DIS Sbjct: 113 PRSPIAELIANR---FS-PWLYNKQVNRVMDLCTGSGCIAIACAYEFEDAEVDALDISDD 168 Query: 133 ALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCLGLEVRDF 190 ALE+A+ N T GV +R ++SD FS++ +D+IVSNPPY+++ + + E Sbjct: 169 ALEVAQINIETLGVMDRVFPMESDLFSAIPKGPQYDLIVSNPPYVDAEDIGDMPDEYH-H 227 Query: 191 DPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAF 250 +P I L G DGL + I + +L +DGL VE+G N V ++ F F +F Sbjct: 228 EPEIGLASGRDGLDLTKRILANAADYLTEDGLLVVEVG-NSMVHIIEQFPDVP-FTWASF 285 Query: 251 KDYGGNDRVLLFCR 264 ++ G D V + R Sbjct: 286 EN--GGDGVFILSR 297 >gi|326317535|ref|YP_004235207.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Acidovorax avenae subsp. avenae ATCC 19860] gi|323374371|gb|ADX46640.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Acidovorax avenae subsp. avenae ATCC 19860] Length = 309 Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 52/164 (31%), Positives = 82/164 (50%), Gaps = 5/164 (3%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LDL TG G++ + P + G D+S AL++A+ N +G+ R SD S+ Sbjct: 139 VLDLCTGNGSLAVLAAMAYPDVRVTGADLSPDALDVARINVERHGLEGRVALALSDGLSA 198 Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220 V G +D+I+ NPPY+ + + L E R +P ++L GG DG+ R + L +D Sbjct: 199 VPGPWDLILCNPPYVNAASMAALPQEYR-AEPELALAGGADGMDFVRRLLADAPAALRED 257 Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 G+ +EIG N++ F F + G D+VLL R Sbjct: 258 GVLILEIG-NERAHFEAAFPHLPAFW---LETSAGEDQVLLLTR 297 >gi|88860367|ref|ZP_01135005.1| putative 50S subunit L3 protein glutamine methyltransferase [Pseudoalteromonas tunicata D2] gi|88817565|gb|EAR27382.1| putative 50S subunit L3 protein glutamine methyltransferase [Pseudoalteromonas tunicata D2] Length = 311 Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 55/156 (35%), Positives = 87/156 (55%), Gaps = 3/156 (1%) Query: 94 EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153 E + V RILD+ TG+ + +AL ++ + VDIS AL++A N V +R + Sbjct: 136 EDQAVHRILDMCTGSACIAIALAEKFDDAQVDAVDISTDALDVADINISDYQVEDRVFPI 195 Query: 154 QSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212 QSD FS V G +D+I++NPPY+++ + L E +P + L G+DGL R I G Sbjct: 196 QSDVFSGVIGQKYDLIIANPPYVDAEDMADLPNEFH-HEPELGLASGVDGLDVTRRILAG 254 Query: 213 VSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN 248 + HLN +GL VE+G N V + I+ + + ++ Sbjct: 255 AAEHLNDNGLLFVEVG-NSMVHMEDIYPNAEFEWID 289 >gi|320538354|ref|ZP_08038232.1| protein-(glutamine-N5) methyltransferase [Treponema phagedenis F0421] gi|320144798|gb|EFW36536.1| protein-(glutamine-N5) methyltransferase [Treponema phagedenis F0421] Length = 300 Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 73/270 (27%), Positives = 123/270 (45%), Gaps = 22/270 (8%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 DS L + G ++ PD+ + Q F N I + + + G +DF+ Sbjct: 33 DSDVLLSSLLGKERSWLLAHPDADVSAIQSSF-KNLIEKRCSGIPVAYLTGKKDFFQSSF 91 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 ++ P+P+TELLV+ L R + +L+ TG+G V +++LKE + + Sbjct: 92 YVTPAVLIPKPDTELLVEQTLEAIRER-SNSSPLSLLEPCTGSGCVVISVLKE---LEKI 147 Query: 126 GV--------DISCKALEIAKSNAVTNGVSERFDTLQS-------DWFSSVEGLFDVIVS 170 G+ DIS +AL +AK NA N +S + L S + FS + +D+I S Sbjct: 148 GITNITTSAFDISNEALAVAKKNA-ENLLSPKMRDLLSFFRFNLQESFSRLGTAYDIIFS 206 Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230 NPPY+ + + L + R +P I+LDGG +GL + +A+ L ++G+ E+ Sbjct: 207 NPPYVPTEMARLLLQDGRK-EPFIALDGGAEGLDFIQALANNSYVVLKRNGMLLSEVDEY 265 Query: 231 QKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 I V KD+ DR++ Sbjct: 266 HANQAADILIKAGFSSVTIHKDFNLQDRLV 295 >gi|224073134|ref|XP_002303988.1| predicted protein [Populus trichocarpa] gi|222841420|gb|EEE78967.1| predicted protein [Populus trichocarpa] Length = 360 Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 64/211 (30%), Positives = 98/211 (46%), Gaps = 22/211 (10%) Query: 57 WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116 WRD L++ PRPETEL+VD ++ ++ ++ D+GTG+GA+ + + Sbjct: 148 WRDLV---LSVQEGVLIPRPETELIVD-LVSDAVSNNQELGQGLWADVGTGSGAIAIGIS 203 Query: 117 K-ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS---VEGLFDVIVSNP 172 K + + + D+S A+ +A N G+ + Q WF VEG IVSNP Sbjct: 204 KILRSYGRVIATDLSPVAVSVAMFNVQRYGLQHVTEVRQGSWFEPLKDVEGQLVGIVSNP 263 Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232 PYI S + L EV +PR++LDGG G+ + + +G + L G + E ++ Sbjct: 264 PYIPSDNISGLQAEVGRHEPRLALDGGASGIDYLLHLCNGAAAMLKPGGFFAFETNGEKQ 323 Query: 233 VDVVRIFESRKLFLVNAFKDYGGNDRVLLFC 263 FLV DY ND FC Sbjct: 324 CK----------FLV----DYMQNDIAGSFC 340 >gi|15618038|ref|NP_224322.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Chlamydophila pneumoniae CWL029] gi|15835650|ref|NP_300174.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Chlamydophila pneumoniae J138] gi|16752930|ref|NP_445201.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Chlamydophila pneumoniae AR39] gi|4376377|gb|AAD18267.1| A/G specific methylase [Chlamydophila pneumoniae CWL029] gi|8163474|gb|AAF73693.1| modification methylase, HemK family [Chlamydophila pneumoniae AR39] gi|8978488|dbj|BAA98325.1| A/G specific methylase [Chlamydophila pneumoniae J138] gi|269302995|gb|ACZ33095.1| methyltransferase, HemK family [Chlamydophila pneumoniae LPCoLN] Length = 288 Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 60/207 (28%), Positives = 97/207 (46%), Gaps = 6/207 (2%) Query: 56 GWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL 115 G F +RL + S PR ETELL + + + L E + D+ G+G + LA+ Sbjct: 74 GAVSFLGLRLRVDSRVLIPRTETELLAEYIINYLLSHSE---IQTFYDICCGSGCLGLAI 130 Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYI 175 K P + V D+ +A+ +A NA +NG+ + L D + D V NPPY+ Sbjct: 131 KKSCPHVEVVLSDVCPQAVAVANENAKSNGLDVKI--LLGDLSAPYTRPADAFVCNPPYL 188 Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235 + + EVR ++P +L GG GL Y+ IA + + + G+ +EIG +Q + Sbjct: 189 SFNEIIHIDPEVRCYEPWKALVGGSTGLEFYQRIAQELPKIVTSTGVGWLEIGSSQGESI 248 Query: 236 VRIFESRKLFLVNAFKDYGGNDRVLLF 262 IF ++ +D G DR+ Sbjct: 249 KNIFSKHGIY-GRLHQDLSGRDRIFFL 274 >gi|291294531|ref|YP_003505929.1| modification methylase HemK family [Meiothermus ruber DSM 1279] gi|290469490|gb|ADD26909.1| modification methylase, HemK family [Meiothermus ruber DSM 1279] Length = 307 Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 59/183 (32%), Positives = 93/183 (50%), Gaps = 8/183 (4%) Query: 46 LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLG 105 L + +LG +FY +RL ++ PRPETE LV+ AL + +LD+G Sbjct: 67 LSGHPLQLLLGESEFYGLRLKVARGVLIPRPETEGLVERALT----HLPLDAPAWVLDVG 122 Query: 106 TGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF 165 TG+GA+ LA+ P DI+ KALE+AK NA+ G+ F L++ + +++ GL Sbjct: 123 TGSGAIALAIKAMRPQATVWATDINPKALELAKENALHLGLEVSF--LEAPFTANLTGL- 179 Query: 166 DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225 D+++SNPPY+ + E+ D R +L G +GL R + L G + Sbjct: 180 DLVISNPPYLPESYREEAPPELAYEDER-ALYAGPEGLDVARALLPQAWDALQPGGWLWL 238 Query: 226 EIG 228 E+ Sbjct: 239 ELA 241 >gi|71280281|ref|YP_269848.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Colwellia psychrerythraea 34H] gi|71146021|gb|AAZ26494.1| modification methylase, HemK family [Colwellia psychrerythraea 34H] Length = 314 Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 52/139 (37%), Positives = 77/139 (55%), Gaps = 2/139 (1%) Query: 94 EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153 E+ RILDL TG+G + +A P + VD+S AL +A+ N +G+SE+ + Sbjct: 131 EQNPPQRILDLCTGSGCIAIACASYFPDAEVDAVDLSLDALNVAEINIENHGLSEQVIPI 190 Query: 154 QSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212 QSD FS V +D+IV+NPPY++ +D L E +P + L G DGL R I Sbjct: 191 QSDVFSGVTAQKYDLIVTNPPYVDQEDIDSLPAEFT-HEPEMGLGCGEDGLDIVRIILAE 249 Query: 213 VSRHLNKDGLCSVEIGYNQ 231 + +LN DG+ E+G +Q Sbjct: 250 SALYLNDDGVLICEVGNSQ 268 >gi|254458489|ref|ZP_05071914.1| modification methylase HemK [Campylobacterales bacterium GD 1] gi|207084797|gb|EDZ62084.1| modification methylase HemK [Campylobacterales bacterium GD 1] Length = 276 Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 65/222 (29%), Positives = 106/222 (47%), Gaps = 10/222 (4%) Query: 38 LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97 L + R K+E + I FY+ ++ PRPETELL+D L + P + + Sbjct: 58 LYEWVERRAKNEPLEYITNSVSFYSQEFFIAPGALIPRPETELLIDDVLK-NFPDTDAK- 115 Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 + +++G G+G + + L + K + VDIS AL IAK+N + R + Sbjct: 116 -MTFIEVGIGSGIISIVLAQHYKNAKFIAVDISPAALIIAKANIEKFEMQNRIELRLGSL 174 Query: 158 FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV-SRH 216 V+ D +VSNPPYI + I+ L ++P+ +L GG G + + D V R+ Sbjct: 175 LEPVDEHIDYLVSNPPYIANEILLESNL---SYEPQNALFGGNIGDEIIQNLLDEVLKRN 231 Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258 +N + EIGY+QK + ++ + +KDY DR Sbjct: 232 IN---FFTCEIGYDQKDRIRDYLKNTDFDSLEFYKDYSDFDR 270 >gi|203287655|ref|YP_002222670.1| HemK family methylase [Borrelia recurrentis A1] gi|201084875|gb|ACH94449.1| HemK family methylase [Borrelia recurrentis A1] Length = 277 Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 64/219 (29%), Positives = 106/219 (48%), Gaps = 20/219 (9%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110 IH ILG ++F ++ ++ PR +TE LV+ AL +I+K ++ +ILDL G+G Sbjct: 64 IHYILGTKEFMGIKFYINKHVLIPRDDTECLVEEALI----QIKKNNLSKILDLCCGSGC 119 Query: 111 VCLAL---LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDV 167 + L + LK+ K DIS +AL+++ N ++ + +S+ + F++ Sbjct: 120 IGLTIAYYLKQ----KVTLADISAQALKVSLKNTQRLNLTNHIEIKRSNLLKYIGKKFEL 175 Query: 168 IVSNPPYI---ESVIVDCLGLEVRDFDPRISLDG-GIDGLSHYRTIADGVSRHLNKDGLC 223 I++NPPY+ E I + L E PRI+L G G DGL + I L K+GL Sbjct: 176 IITNPPYLTKDELRIKEKLAKE-----PRIALLGFGQDGLKIAKKIIKQAKYKLTKNGLL 230 Query: 224 SVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262 +E+ QK + + + D +R LL Sbjct: 231 ILEMAPWQKKSLEKFAIQEGFTYLKTIYDIENRERALLL 269 >gi|295839269|ref|ZP_06826202.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptomyces sp. SPB74] gi|295827385|gb|EDY42652.2| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptomyces sp. SPB74] Length = 261 Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 62/204 (30%), Positives = 93/204 (45%), Gaps = 5/204 (2%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101 + R + E + ++G F +R+ + F PR +E LV A +L + R V + Sbjct: 39 VERRVAGEPLEYVVGHAVFRGLRIEVGPGVFVPRGRSEFLV----ARALDGVRARGAVTL 94 Query: 102 LDLGTGTGAVCLALLKE-SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 LDL G+GA+ LAL P D+ AL A+ N G L + + Sbjct: 95 LDLCCGSGALGLALRTALGPRATLHAADLDPGALRWARRNLAPVGAHVYEGDLYAPLPPA 154 Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220 + G DV+ +N PY+ S V L E R +P ++LDGG DGL R +A + L + Sbjct: 155 LRGRVDVLTANVPYVPSEEVRLLPAEARAHEPLLALDGGADGLDLVRRVAREATAWLAPN 214 Query: 221 GLCSVEIGYNQKVDVVRIFESRKL 244 G +E G Q +V IF + L Sbjct: 215 GRLLIESGDRQAPEVAAIFTTAGL 238 >gi|296135886|ref|YP_003643128.1| modification methylase, HemK family [Thiomonas intermedia K12] gi|295796008|gb|ADG30798.1| modification methylase, HemK family [Thiomonas intermedia K12] Length = 324 Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 62/241 (25%), Positives = 103/241 (42%), Gaps = 19/241 (7%) Query: 17 LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRP 76 +S H P L Q L I R + E I + GW+ F + L S + PR Sbjct: 65 MSLHAAAETPLVALSAAQLETLDRLIERRVAGEPIAYLTGWQRFMGLELRASPEALIPRA 124 Query: 77 ETELLVDSAL--------AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128 E+ELL A A + P I ++D+ G+G + LAL P + G D Sbjct: 125 ESELLGQIAAQKLRSMAEATATPPI-------VIDVCCGSGNLALALAHAVPQAQVHGAD 177 Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV----EGLFDVIVSNPPYIESVIVDCLG 184 IS A+++A++N + +R D + +G D++VS PPYI + +D + Sbjct: 178 ISQTAIDLARANTQNLDLGQRVSLHTGDLLAPFGAEFQGKVDLVVSLPPYISTAKMDTMP 237 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 E+ +P ++ DGG G+ + L G +E+G Q ++++ E Sbjct: 238 HEIVGHEPHLAFDGGPFGVRILMRLIREAPPLLRPGGWLGMEVGLGQGPAMMQLLEKHPA 297 Query: 245 F 245 + Sbjct: 298 Y 298 >gi|295103956|emb|CBL01500.1| HemK family putative methylases [Faecalibacterium prausnitzii SL3/3] Length = 323 Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 72/277 (25%), Positives = 110/277 (39%), Gaps = 47/277 (16%) Query: 27 DSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL 86 D L Q L R E + + G F + L + PR +TE++ +A Sbjct: 47 DCPLTAEQAAALEVLCTRRAAREPLQYLCGSWSFLDFELAVGPGVLCPRADTEVVAQAA- 105 Query: 87 AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA----- 141 A +L IE R+LDL GTG + L + + P + V+ S A + NA Sbjct: 106 AETLAGIES---PRVLDLCAGTGCLGLGVKRFCPAAQVTCVEKSPAAFTYLEKNARCALT 162 Query: 142 ----VTNGVSERFDTLQSD---------------------------------WFSSVEGL 164 T V E Q+D W + EG Sbjct: 163 GQGRQTENVLEPSALEQADAPALDWGPALNALRAGKKPVYAVQPVQGDLFTYWETLPEGQ 222 Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224 ++IVSNPPY+ + ++ L EV +P ++L+ G DGL YR +A L G Sbjct: 223 LELIVSNPPYLTAAEMEQLQPEVAQ-EPAMALEAGEDGLVFYRALAQHYQNALCPGGALV 281 Query: 225 VEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 +EIG+ Q+ V + + +D+GGNDR ++ Sbjct: 282 LEIGWQQREAVSALLAENGWADIRCIQDFGGNDRCVI 318 >gi|212712228|ref|ZP_03320356.1| hypothetical protein PROVALCAL_03314 [Providencia alcalifaciens DSM 30120] gi|212684974|gb|EEB44502.1| hypothetical protein PROVALCAL_03314 [Providencia alcalifaciens DSM 30120] Length = 310 Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 55/165 (33%), Positives = 87/165 (52%), Gaps = 6/165 (3%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 ILDL TG+G + +A E P + VDIS L + + N +G+ R ++SD F Sbjct: 136 ILDLCTGSGCIAIACAYEFPEAEVDAVDISTDVLAVTEQNIANHGLEHRVIPIRSDLFRD 195 Query: 161 V-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 + E +D+IV+NPPY+++ +D L E R +P ++L G DGL R I R LN+ Sbjct: 196 MPEVKYDLIVTNPPYVDAEDMDDLPQEFR-VEPELALAAGSDGLKLVRRILANAPRFLNE 254 Query: 220 DGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 DG+ E+G N V ++ + ++ ++GG D V + R Sbjct: 255 DGILVCEVG-NSMVHLIEQYPDIPFIWLDF--EFGG-DGVFMLTR 295 >gi|148272338|ref|YP_001221899.1| putative methylase of peptide chain release factors [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|147830268|emb|CAN01202.1| putative methylase of peptide chain release factors [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 291 Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 63/202 (31%), Positives = 95/202 (47%), Gaps = 13/202 (6%) Query: 43 VRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRIL 102 R + E + I G F ++ L + F PRPETE + + LA + + Sbjct: 72 ARRARREPLQHITGVAHFRSLELLVGPGVFVPRPETEHV--AQLAIDALTAAPGEAPVAV 129 Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ---SDWFS 159 DLGTG+GA+ LAL E P + +++S +A N ++ D + +D F Sbjct: 130 DLGTGSGALALALATEVPHARVHAIEVSPEAHAWTARN--VERLAPHVDLVLGDLADAFP 187 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLG--LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217 ++G V+VSNPPYI + D + EVR DP ++L GG DGL R ++ R L Sbjct: 188 GLDGTVSVVVSNPPYIPA---DAIPRDPEVRLHDPALALYGGADGLDVVRLVSTTARRLL 244 Query: 218 NKDGLCSVEIGYNQKVDVVRIF 239 + G +E G Q D +R Sbjct: 245 HPGGALVIEHGELQG-DAIRAL 265 >gi|330964612|gb|EGH64872.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Pseudomonas syringae pv. actinidiae str. M302091] Length = 302 Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 59/179 (32%), Positives = 91/179 (50%), Gaps = 6/179 (3%) Query: 54 ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113 +LG F + + PR L++ A L + RILDL TG+G + + Sbjct: 86 LLGEAWFCGMSFIVDDRVLIPRSPIAELIEERFAPWL----ASEPARILDLCTGSGCIGI 141 Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNP 172 A E P + D+S ALE+A N +G+ +R T+Q D F + G FD+IVSNP Sbjct: 142 ACADEFPDAEVALADLSYDALEVASLNIERHGMDDRVYTVQGDGFDGLPGQRFDLIVSNP 201 Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231 PY+++ + E + +P ++L G DGL+ R + + HLN+ GL VE+G +Q Sbjct: 202 PYVDAEDFADMPDEYQ-HEPELALACGSDGLNLVRRMLAQAADHLNEKGLLIVEVGNSQ 259 >gi|153808976|ref|ZP_01961644.1| hypothetical protein BACCAC_03277 [Bacteroides caccae ATCC 43185] gi|149128309|gb|EDM19528.1| hypothetical protein BACCAC_03277 [Bacteroides caccae ATCC 43185] Length = 278 Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 74/252 (29%), Positives = 113/252 (44%), Gaps = 10/252 (3%) Query: 12 CRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDT 71 C + GL + + + D +L + ++ L N I R K+E I I G+ +F + ++ Sbjct: 30 CDMLGLDALDIYMGKDIILSECKQRELENIIFRLQKNEPIQYIRGFAEFCGRKFKVAPGV 89 Query: 72 FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131 PRPET LV+ + E +LD+GTG+G + ++L + P + D+S Sbjct: 90 LIPRPETAELVELIVK------ENPGARHLLDIGTGSGCIAISLDQNLPDAEVEAWDVSE 143 Query: 132 KALEIAKSN--AVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRD 189 +AL IA N + V R + SD + +DVIVSNPPYI + V D Sbjct: 144 EALAIASENNKELDARVMFRRRDVLSDELGAT-SCYDVIVSNPPYITEAEKQDMEANVLD 202 Query: 190 FDPRISL-DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN 248 ++P ++L D L YR IA L G EI + I E + V Sbjct: 203 WEPGLALFVPDDDPLRFYRRIARLGCDLLLPGGKLYFEINQAYGRETAHILEMNQYRDVR 262 Query: 249 AFKDYGGNDRVL 260 KD G DR++ Sbjct: 263 VIKDIFGKDRIV 274 >gi|324999417|ref|ZP_08120529.1| modification methylase, HemK family protein [Pseudonocardia sp. P1] Length = 251 Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 62/211 (29%), Positives = 94/211 (44%), Gaps = 16/211 (7%) Query: 38 LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97 L + + R + E + +LGW F R+ ++ F PR TE LV +A+A P Sbjct: 32 LDDLVRRRVAGEPLEHVLGWAAFDGARVRVAPGVFVPRRRTEALVHAAVAGLGPG----- 86 Query: 98 VVRILDLGTGTGAVCLALLKESPF-FKGVGVD---ISCKALEIAKSNAVTNGVSERFDTL 153 ++DL G GAV A+ + P VD +C A + V G + F L Sbjct: 87 -AVVVDLCCGCGAVGAAIARRVPVELHAADVDPVATACAATNLDGLGTVHTG--DLFAAL 143 Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213 + ++ G V+V+N PY+ + + + E RD +PR++LDGG DGL R IA G Sbjct: 144 PA----TLRGRVAVLVANTPYVPAGAIAGMPPEARDHEPRVALDGGGDGLDPARRIAAGA 199 Query: 214 SRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 L G +E Q + +F L Sbjct: 200 PGWLAPGGTLLIETSAAQAPLLADVFAGHGL 230 >gi|260219431|emb|CBA26276.1| Uncharacterized adenine-specific methylase NMA1912 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 300 Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 59/192 (30%), Positives = 95/192 (49%), Gaps = 14/192 (7%) Query: 78 TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137 ELLVD ++ + L K +LDL TG G++ + P + G DIS AL +A Sbjct: 109 AELLVDGSIDYWL----KESTHHVLDLCTGNGSLGILATMVYPDVEVTGADISADALAVA 164 Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197 + N + + R L+SD ++ G+FD+++ NPPY+ + + L E +P I+LD Sbjct: 165 RVNVDKHRLQNRMKLLESDGLKAIPGVFDLVLCNPPYVNAKSMAALPAEYL-AEPFIALD 223 Query: 198 GGI-----DGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKD 252 G DG+ RT+ G+ L+ DG+ +EIG ++ E ++L + Sbjct: 224 GNQAGGSGDGMDFIRTLLAGLPPKLSDDGVLVLEIGNEREYFEAAFPELEVVWL----ET 279 Query: 253 YGGNDRVLLFCR 264 G D+VLL R Sbjct: 280 SAGEDQVLLLTR 291 >gi|296139487|ref|YP_003646730.1| modification methylase, HemK family [Tsukamurella paurometabola DSM 20162] gi|296027621|gb|ADG78391.1| modification methylase, HemK family [Tsukamurella paurometabola DSM 20162] Length = 245 Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 62/208 (29%), Positives = 93/208 (44%), Gaps = 22/208 (10%) Query: 38 LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97 L + + R E + +LGW +F RL++ F PR TELL + A E R Sbjct: 31 LEDLVRRRCSGEPLEHLLGWAEFRGTRLSVGPGAFVPRRRTELLAELA-------DEARP 83 Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 V +++L G + + + VDI L A+ NA + V L D Sbjct: 84 SV-LVELCCGVAPIASTCTADEVY----AVDIDPVPLVYARENAPSATV------LAGDL 132 Query: 158 FSSVE----GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213 F+ + G DVI +N PY+ S + + E RD +PR +LDGG DGL+ +R IA Sbjct: 133 FAPLPRDLCGRTDVIAANAPYVPSAAIATMPAEARDHEPRAALDGGPDGLALHRRIAAEA 192 Query: 214 SRHLNKDGLCSVEIGYNQKVDVVRIFES 241 L + G+ +E G Q R+ + Sbjct: 193 RMWLAEGGVVLIETGRYQAEYTERLLRA 220 >gi|213967483|ref|ZP_03395631.1| modification methylase, HemK family [Pseudomonas syringae pv. tomato T1] gi|301386444|ref|ZP_07234862.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Pseudomonas syringae pv. tomato Max13] gi|302058664|ref|ZP_07250205.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Pseudomonas syringae pv. tomato K40] gi|302131200|ref|ZP_07257190.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213927784|gb|EEB61331.1| modification methylase, HemK family [Pseudomonas syringae pv. tomato T1] gi|331016925|gb|EGH96981.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 302 Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 59/179 (32%), Positives = 91/179 (50%), Gaps = 6/179 (3%) Query: 54 ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113 +LG F + + PR L++ A L + RILDL TG+G + + Sbjct: 86 LLGEAWFCGMSFIVDDRVLIPRSPIAELIEERFAPWL----ASEPARILDLCTGSGCIGI 141 Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNP 172 A E P + D+S ALE+A N +G+ +R T+Q D F + G FD+IVSNP Sbjct: 142 ACADEFPDAEVALADLSYDALEVASLNIERHGMDDRVYTVQGDGFDGLPGQRFDLIVSNP 201 Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231 PY+++ + E + +P ++L G DGL+ R + + HLN+ GL VE+G +Q Sbjct: 202 PYVDAEDFADMPDEYQ-HEPELALACGSDGLNLVRRMLAQAADHLNEKGLLIVEVGNSQ 259 >gi|167762047|ref|ZP_02434174.1| hypothetical protein BACSTE_00395 [Bacteroides stercoris ATCC 43183] gi|167700139|gb|EDS16718.1| hypothetical protein BACSTE_00395 [Bacteroides stercoris ATCC 43183] Length = 303 Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 77/259 (29%), Positives = 111/259 (42%), Gaps = 16/259 (6%) Query: 12 CRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDT 71 C + G ++ + D +L ++ L + R E I + G F ++ Sbjct: 55 CEMLGQTAVDYYLGKDMILSPKEMQDLDTILARLRNFEPIQYVQGTARFLERSYYVAPGV 114 Query: 72 FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131 PRPETE LV+ L E RILD+GTG+G + ++L K P K DIS Sbjct: 115 LIPRPETEELVEVMLK------EVPSGARILDIGTGSGCIAISLSKMLPDAKVTAWDISD 168 Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFSSVEG---LFDVIVSNPPYIESVIVDCLGLEVR 188 AL IA+ N S F +Q D + V G +DVIVSNPPY+ + V Sbjct: 169 TALRIARRNNEALQASVCF--VQRDVLAYVPGSGERYDVIVSNPPYVTESEKQEMERNVL 226 Query: 189 DFDPRISL---DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245 D++P +L D D L YR IA+ L G EI + ++ Sbjct: 227 DWEPFSALFVPDN--DPLLFYRRIAELGKGMLASGGRLYFEINRAFGEATATMLRAQGYT 284 Query: 246 LVNAFKDYGGNDRVLLFCR 264 + KD GNDR+++ R Sbjct: 285 NLRVLKDISGNDRIVIAER 303 >gi|224532130|ref|ZP_03672762.1| putative protoporphyrinogen oxidase [Borrelia valaisiana VS116] gi|224511595|gb|EEF82001.1| putative protoporphyrinogen oxidase [Borrelia valaisiana VS116] Length = 273 Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 61/201 (30%), Positives = 101/201 (50%), Gaps = 14/201 (6%) Query: 30 LDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFS 89 L R++ + I R K IH IL ++F + +L+ PR +TE LV+ AL Sbjct: 43 LTKREKKLFFDQIDRIEKGTPIHYILQKKEFMGIEFSLNKHVLIPRFDTECLVEEALI-- 100 Query: 90 LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 +I++ D +ILDL G+G + L++ + K + DIS KAL+IA N + + Sbjct: 101 --QIQQNDFKKILDLCCGSGCIGLSIAYCTKK-KVILSDISIKALQIASKNTKKLKLEKF 157 Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRD---FDPRISLDG-GIDGLSH 205 + + S+ ++ D+I++NPPY+ LE+++ +P +L G G DGL+ Sbjct: 158 VEIIHSNLLKCIKVKLDIIITNPPYLNKE-----ELEIKNKIKKEPTKALLGFGKDGLNI 212 Query: 206 YRTIADGVSRHLNKDGLCSVE 226 R I LN +GL +E Sbjct: 213 SRKILSQAKEKLNPNGLIIIE 233 >gi|325273576|ref|ZP_08139802.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Pseudomonas sp. TJI-51] gi|324101293|gb|EGB98913.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Pseudomonas sp. TJI-51] Length = 302 Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 62/207 (29%), Positives = 100/207 (48%), Gaps = 7/207 (3%) Query: 27 DSVLDDRQRFFLTNAIVRSLKHE-SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85 D +L+D +R L + + R ++ +LG F + + PR L++ Sbjct: 58 DCMLEDDERVRLQHLLKRRIEERVPTAYLLGEAWFCGMSFIVDERVLVPRSPIGELIEKR 117 Query: 86 LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145 L + RILDL TG+G + + P + V D+S +ALE+A N +G Sbjct: 118 FEPWL----ANEPARILDLCTGSGCIGIVAADVFPEAEVVLADLSFQALEVANQNIERHG 173 Query: 146 VSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204 + R T+Q D F+ + G FD+I+SNPPY+++ D + E +P + L G DGL Sbjct: 174 LDARVYTVQGDGFAGLPGQRFDLILSNPPYVDAEDFDDMPAEYH-HEPELGLACGNDGLD 232 Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQ 231 R + + HL + GL VE+G +Q Sbjct: 233 LVRRMLAEAADHLTEKGLLIVEVGNSQ 259 >gi|294790652|ref|ZP_06755810.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Scardovia inopinata F0304] gi|294458549|gb|EFG26902.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Scardovia inopinata F0304] Length = 333 Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 81/253 (32%), Positives = 119/253 (47%), Gaps = 26/253 (10%) Query: 32 DRQRFFLTNA--IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFS 89 DRQ + T A ++R HE + I+G F + + L F PRPETE LV L + Sbjct: 86 DRQAYADTFAATVIRRSHHEPLQYIVGHAPFRYIDVALGPGVFIPRPETETLVSLGLDY- 144 Query: 90 LPRIEKRD---VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA----- 141 L +E+++ ++DL G+G + L+LL E+ + V+ AL + NA Sbjct: 145 LAGLEQKNGELPFFVIDLCAGSGVIGLSLLTENKQTQVYAVEKDQAALVWTEKNARRICQ 204 Query: 142 VTNGVSERFDTLQSD-----WFSSVEGLFDVIVSNPPYI-ESVIVDCLGLEVRDFDPRIS 195 + R+ LQ+D F+ V G D++V+NPPY+ ES I + +EVRD+DP + Sbjct: 205 SSMTDPSRYRLLQADATDPSAFTDVNGTMDLVVTNPPYVPESEIPE--QVEVRDYDPPQA 262 Query: 196 LDGG-IDGLSHYRTIADGVSRHLN--KDGLCSVEIGYNQKVDVVRIFESRKLFL-VNAFK 251 L GG DGL R + R N K G C + + +R F S F K Sbjct: 263 LYGGSSDGL---RIPEQIILRSFNLLKPGGCLILEHDPSQGSALRSFASDHGFCRAETVK 319 Query: 252 DYGGNDRVLLFCR 264 D G +R L R Sbjct: 320 DLNGRERFLTAFR 332 >gi|60593723|pdb|1VQ1|A Chain A, Crystal Structure Of N5-Glutamine Methyltransferase, Hemk(Ec 2.1.1.-) (Tm0488) From Thermotoga Maritima At 2.80 A Resolution gi|60593724|pdb|1VQ1|B Chain B, Crystal Structure Of N5-Glutamine Methyltransferase, Hemk(Ec 2.1.1.-) (Tm0488) From Thermotoga Maritima At 2.80 A Resolution Length = 294 Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 76/220 (34%), Positives = 113/220 (51%), Gaps = 25/220 (11%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110 +H ILG ++F + + F PRPETE LV+ AL I K + + D+GTG+GA Sbjct: 91 LHYILGEKEFXGLSFLVEEGVFVPRPETEELVELALE----LIRKYGIKTVADIGTGSGA 146 Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF---DV 167 + +++ K S D+S KA+EIA+ NA +GVS+RF + ++ + F + Sbjct: 147 IGVSVAKFSDAIV-FATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEPFKEKFASIEX 205 Query: 168 IVSNPPYIES---VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224 I+SNPPY++S + D L F+P +L GG DGL YR R+ + Sbjct: 206 ILSNPPYVKSSAHLPKDVL------FEPPEALFGGEDGLDFYREF---FGRYDTSGKIVL 256 Query: 225 VEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 EIG +Q ++ +I S +FL KD G R LL R Sbjct: 257 XEIGEDQVEELKKIV-SDTVFL----KDSAGKYRFLLLNR 291 >gi|196003016|ref|XP_002111375.1| hypothetical protein TRIADDRAFT_24037 [Trichoplax adhaerens] gi|190585274|gb|EDV25342.1| hypothetical protein TRIADDRAFT_24037 [Trichoplax adhaerens] Length = 347 Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 68/233 (29%), Positives = 105/233 (45%), Gaps = 12/233 (5%) Query: 34 QRFFLTNAIV-RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPR 92 Q+ L N + + L + I+ DF + L + F PRPETE LVD Sbjct: 69 QQIQLFNKLCSKRLDRMPVQYIIREWDFRYITLKMQPPVFIPRPETEELVDLINLHEFHH 128 Query: 93 IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD-----ISCKALEIAKSNAVTNGVS 147 + + + LD+ G+GA+ L+LL E+P + +D IS L + N + + Sbjct: 129 KRENESITFLDICCGSGAIGLSLLCENPQATCIAIDKDPNAISLTELNSQRLNLGSRMIV 188 Query: 148 ERFDTLQSDW---FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204 E D +++++ F E + D IVSNPPYI S + L E+ F+ ++LDGG DGL Sbjct: 189 EHLDVMKTEFHHGFGHDEAV-DFIVSNPPYIPSKQLASLQEEIISFESSLALDGGCDGLD 247 Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL-FLVNA-FKDYGG 255 + I L G +E+ N + + F +A FKDY Sbjct: 248 IVKQILHFARLCLKDKGKIWLEVDINHPEMIEHYLNTHDTDFTYDATFKDYTN 300 >gi|47459024|ref|YP_015886.1| protoporphyrinogen oxidase [Mycoplasma mobile 163K] gi|47458352|gb|AAT27675.1| protoporphyrinogen oxidase [Mycoplasma mobile 163K] Length = 236 Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 64/238 (26%), Positives = 112/238 (47%), Gaps = 17/238 (7%) Query: 27 DSVLDDRQRFFLTNAIV-RSLK----HESIHRILGWRDFYNVRLTLSSDTFEPRPETELL 81 + +L +++R+ L I + LK + I +I+G+ + NV + ++ PR ETE L Sbjct: 5 EDLLKEKRRYKLKEEISEKELKMLNLNFPIQKIMGFIEMQNVIVHVNHFVLIPRYETEEL 64 Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 + A + +E + + +LDL +G+G + LA+ K P + DIS +++ + N Sbjct: 65 ILEAYKY----LENNNNLDVLDLCSGSGFIALAIKKHFPKINVMASDISEESIRQIQENV 120 Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201 N + F L+SD F +E FD+IVSNPPY+ + L V ++P ++L + Sbjct: 121 AINNLDIFF--LKSDLFEKIEKKFDLIVSNPPYLSH--KNVLDESVSKYEPHLALFAKKE 176 Query: 202 GLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRV 259 G I + L +G+ +EI D V+ V+ KD R+ Sbjct: 177 GFEIIEKIIFSAKKFLKSNGVLLLEID----TDKVKFINKIDFIQVSYLKDINNKTRI 230 >gi|329726153|gb|EGG62625.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Staphylococcus epidermidis VCU144] Length = 278 Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 68/231 (29%), Positives = 114/231 (49%), Gaps = 20/231 (8%) Query: 38 LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97 L A+ R + E I I+G + FY + ++ PRPETE + L F L +K D Sbjct: 56 LDKALDRMVAGEPIQYIVGLQSFYGYQYKVNQHCLIPRPETE---EVMLHF-LELCKKTD 111 Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQ 154 I D+GTG+GA+ + L P + D+ AL +AK NA + +F + L+ Sbjct: 112 T--IADIGTGSGAIAITLKLLQPELNVIATDLYEDALNVAKQNASHYHQNIQFLRGNALK 169 Query: 155 SDWFSSVEGLFDVIVSNPPYI-ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213 + ++ D ++SNPPYI S I+D + V +++P +L +G + Y +I + + Sbjct: 170 PLIENDIK--LDGLISNPPYIGHSEIID-MESTVLNYEPHHALFAEKNGFAIYESILEDL 226 Query: 214 SRHLNKDGLCSVEIGYNQ----KVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 + + G EIGY+Q K+ + ++ ++ V FKD GN R + Sbjct: 227 PFVMKQGGYVVFEIGYSQGDILKIMIQDLYPEKE---VEIFKDINGNQRTI 274 >gi|257484475|ref|ZP_05638516.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Pseudomonas syringae pv. tabaci ATCC 11528] gi|289626422|ref|ZP_06459376.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289649576|ref|ZP_06480919.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Pseudomonas syringae pv. aesculi str. 2250] gi|298486374|ref|ZP_07004436.1| Hypothetical adenine-specific methylase yfcB [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298159102|gb|EFI00161.1| Hypothetical adenine-specific methylase yfcB [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|330866346|gb|EGH01055.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Pseudomonas syringae pv. aesculi str. 0893_23] gi|331013259|gb|EGH93315.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 302 Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 60/187 (32%), Positives = 95/187 (50%), Gaps = 7/187 (3%) Query: 54 ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113 +LG F + + PR L++ A L + RILDL TG+G + + Sbjct: 86 LLGEAWFCGMSFIVDDRVLIPRSPIAELIEERFAPWL----ANEPARILDLCTGSGCIGI 141 Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNP 172 A + P + D+S ALE+A N +G+ +R T+Q D F + G FD+IVSNP Sbjct: 142 ACAEVFPEAEVALADLSYDALEVANQNIERHGMEDRVYTVQGDGFDGLPGQRFDLIVSNP 201 Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232 PY+++ + E + +P ++L G DGL+ R + + HLN+ GL VE+G N + Sbjct: 202 PYVDAEDFADMPDEYQ-HEPELALACGSDGLNLVRRMLAQAADHLNEKGLLIVEVG-NSQ 259 Query: 233 VDVVRIF 239 V V ++ Sbjct: 260 VHVQALY 266 >gi|284992527|ref|YP_003411081.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Geodermatophilus obscurus DSM 43160] gi|284065772|gb|ADB76710.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Geodermatophilus obscurus DSM 43160] Length = 286 Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 58/189 (30%), Positives = 89/189 (47%), Gaps = 13/189 (6%) Query: 50 SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109 + + G F ++ L + F PRPETE LV+ ALA R+ ++DLG+G+G Sbjct: 67 PLQHLTGRAPFRSLELAVGPGVFVPRPETEQLVEWALA----RLAGLAEPVVVDLGSGSG 122 Query: 110 AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS--ERFDTLQSDW-----FSSVE 162 A+ L++ E P + V+ A+E + NA + + D L D ++ Sbjct: 123 AIALSIAHEHPGARVTAVERDPGAIEWTRHNAASRAAAGDTPVDVLSGDMTDPGLLRELD 182 Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL 222 G D++VSNPPY+ + EV D DP ++L GG DGL R + +R L G Sbjct: 183 GTVDLVVSNPPYVPDGA--TVPREVADHDPPLALWGGPDGLDVVRGLLRTAARLLRPGGG 240 Query: 223 CSVEIGYNQ 231 +E Q Sbjct: 241 LGIEHADQQ 249 >gi|184200615|ref|YP_001854822.1| protein methyltransferase HemK [Kocuria rhizophila DC2201] gi|183580845|dbj|BAG29316.1| protein methyltransferase HemK [Kocuria rhizophila DC2201] Length = 289 Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 67/216 (31%), Positives = 92/216 (42%), Gaps = 10/216 (4%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VR 100 + R E + I G F + L + F PRPETELLV AL + E +V Sbjct: 61 VHRRAAREPLQHITGTAPFRQLELAVGPGVFVPRPETELLVQLALDHARAWREAGEVHPA 120 Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS- 159 ++DLGTG+GA+ LA+ E P + V+ AL + N R L+ D+ Sbjct: 121 VIDLGTGSGAIALAVASEDPACRVTAVEREPAALAWTRRNLAGT----RVRLLECDYRDV 176 Query: 160 --SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG-IDGLSHYRTIADGVSRH 216 G F V+V+NPPY+ V EVR+ DP +L GG G+ H D R Sbjct: 177 SVPTAGRFCVVVTNPPYVPETDVP-RDPEVREHDPATALYGGDATGMRHPLAAMDTAVRV 235 Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKD 252 L G +E +Q V R V +D Sbjct: 236 LRPGGSFIMEHAESQVEAVAHALRERSFRNVELHRD 271 >gi|111115019|ref|YP_709637.1| HemK family methylase [Borrelia afzelii PKo] gi|110890293|gb|ABH01461.1| HemK family methylase, putative [Borrelia afzelii PKo] Length = 273 Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 59/212 (27%), Positives = 104/212 (49%), Gaps = 20/212 (9%) Query: 22 VIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELL 81 +I + L +++ + I + K IH IL ++F + TL+ PR +TE L Sbjct: 35 IIANIKKSLTKKEKNLFFDHIYKIEKGTPIHYILKKKEFMGIEFTLNKHVLIPRFDTECL 94 Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV---DISCKALEIAK 138 V+ AL +I++ +ILDL G+G + +++ ++ V DIS KAL+I + Sbjct: 95 VEEALI----QIQQNGFKKILDLCCGSGCIGISI----AYYMKKKVMLSDISIKALQIVE 146 Query: 139 SNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRD---FDPRIS 195 N + + + + S+ ++G D+I++NPPY+ LE+++ +P + Sbjct: 147 KNTKKLKLEKFVEIIHSNLLKCIKGRIDIIITNPPYLNKE-----ELEIKNKIKKEPAKA 201 Query: 196 LDG-GIDGLSHYRTIADGVSRHLNKDGLCSVE 226 L G G DGL+ R I LN +GL +E Sbjct: 202 LLGFGKDGLNISRKILSQAKEKLNPNGLIIIE 233 >gi|111021210|ref|YP_704182.1| site-specific DNA-methyltransferase (adenine-specific) [Rhodococcus jostii RHA1] gi|110820740|gb|ABG96024.1| possible site-specific DNA-methyltransferase (adenine-specific) [Rhodococcus jostii RHA1] Length = 262 Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 60/208 (28%), Positives = 90/208 (43%), Gaps = 7/208 (3%) Query: 38 LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97 L + + R + + +LGW +F +R+ + F PR T LV+ A A + P Sbjct: 42 LASMLDRRVAGVPLEHVLGWAEFCGLRIAVDPRVFVPRRRTAFLVEQAAALAGPH----- 96 Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 + DL G+GAV AL + + VDI A+ A+ N G D L Sbjct: 97 -AVVADLCCGSGAVGAALAETGDGIELYAVDIDPAAVRCARRNVPDPGRVFEGD-LYEPL 154 Query: 158 FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217 +++ G DV+V+N PY+ + + + E R +PR+SLDGG DGL R + G L Sbjct: 155 PTALRGGIDVLVANAPYVPTDAIRLMPPEARFHEPRVSLDGGADGLDIQRRMTLGARDWL 214 Query: 218 NKDGLCSVEIGYNQKVDVVRIFESRKLF 245 G +E Q F L Sbjct: 215 APGGHLLIETSAGQAPLTAEAFADAGLI 242 >gi|238810251|dbj|BAH70041.1| hypothetical protein [Mycoplasma fermentans PG18] Length = 241 Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 66/215 (30%), Positives = 107/215 (49%), Gaps = 22/215 (10%) Query: 25 DPDSVLDDRQRFFLTNAIVRS-----LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETE 79 + ++++ +++R+ L I ++ I I+G+ ++ N R+ L PR ETE Sbjct: 7 NEETLILEKKRYGLEPKITEKEYELLRQNYPIQLIMGYVEYLNTRINLREQVLIPRYETE 66 Query: 80 LLVDSALA-FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAK 138 +VD L F+ E +LDL G+G + LA+ K K VDIS +A++ Sbjct: 67 EMVDIYLKEFAAENQE------VLDLCCGSGFIGLAIKKNLRSAKVTLVDISDEAIKQTI 120 Query: 139 SNAVTN-GVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC----LGLEVRDFDPR 193 N++ N G + QSD F++V+G FDVI+SNPPY+ +C L + F+P+ Sbjct: 121 ENSIVNFGFNHDLKIYQSDLFTNVKGRFDVIISNPPYL-----NCNDKSLDWKALSFEPK 175 Query: 194 ISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228 I+L DG Y I +L K+G +EI Sbjct: 176 IALCAPEDGWYFYDKILKKYKNYLKKNGWLIMEIN 210 >gi|332671312|ref|YP_004454320.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Cellulomonas fimi ATCC 484] gi|332340350|gb|AEE46933.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Cellulomonas fimi ATCC 484] Length = 306 Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 59/187 (31%), Positives = 87/187 (46%), Gaps = 5/187 (2%) Query: 44 RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103 R + E + I+G F + L + F PRPETE++ A+ + + ++D Sbjct: 64 RRRRREPLQHIVGRTTFRWLTLHVEPGVFVPRPETEVVAQVAVDEAARLVAAGTSPVVVD 123 Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSS 160 L G G + LA+ E P + VD S A+ + + NA G R D + + Sbjct: 124 LCCGAGGLGLAVATEVPGSRVAAVDASPAAVALTRRNAADAGADVRVLPGDVRDTGLLAD 183 Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL-DGGIDGLSHYRTIADGVSRHLNK 219 + G DV+VSNPPYI + + EVRD DP ++L GG DGL R + R L Sbjct: 184 LAGRVDVVVSNPPYIPP-DAEPVDPEVRDHDPDLALYGGGADGLDVPRAVLAAAVRLLRP 242 Query: 220 DGLCSVE 226 GL +E Sbjct: 243 GGLLVME 249 >gi|167555081|ref|NP_001107891.1| hemK methyltransferase family member 1 [Danio rerio] gi|161611486|gb|AAI55790.1| Hemk1 protein [Danio rerio] Length = 342 Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 63/210 (30%), Positives = 98/210 (46%), Gaps = 17/210 (8%) Query: 29 VLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAF 88 L D++R + + L + ++ DF ++ L + F PRPETE LV L Sbjct: 97 TLTDKERETVWKLCSKRLTRMPVQYVIEEWDFRDLTLKMKPPVFIPRPETEELVGLVL-- 154 Query: 89 SLPRIEKRDVVRI----LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN 144 E + +R L++G G+GA+ L+LL+ P + +D S A+ + NA Sbjct: 155 -----EDFESIRGDFHGLEVGCGSGAISLSLLRSLPQLRVFALDQSQDAVCLTMENANRL 209 Query: 145 GVSERFDTLQSDWFSSVEGLF------DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG 198 G+ +R + D + + D IVSNPPYI S ++ L E+ F+ +LDG Sbjct: 210 GLQDRLEVHHLDVVKDADVILSKCNPVDFIVSNPPYILSQDMEALQTEILGFEDHAALDG 269 Query: 199 GIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228 G DGL R I S+ L K G +E+ Sbjct: 270 GSDGLFVIRPILALASKLLTKQGRVYLEVS 299 >gi|308190291|ref|YP_003923222.1| protoporphyrinogen oxidase [Mycoplasma fermentans JER] gi|307625033|gb|ADN69338.1| protoporphyrinogen oxidase [Mycoplasma fermentans JER] Length = 237 Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 66/215 (30%), Positives = 107/215 (49%), Gaps = 22/215 (10%) Query: 25 DPDSVLDDRQRFFLTNAIVRS-----LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETE 79 + ++++ +++R+ L I ++ I I+G+ ++ N R+ L PR ETE Sbjct: 3 NEETLILEKKRYGLEPKITEKEYELLRQNYPIQLIMGYVEYLNTRINLREQVLIPRYETE 62 Query: 80 LLVDSALA-FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAK 138 +VD L F+ E +LDL G+G + LA+ K K VDIS +A++ Sbjct: 63 EMVDIYLKKFAAENQE------VLDLCCGSGFIGLAIKKNLRSAKVTLVDISDEAIKQTI 116 Query: 139 SNAVTN-GVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC----LGLEVRDFDPR 193 N++ N G + QSD F++V+G FDVI+SNPPY+ +C L + F+P+ Sbjct: 117 ENSIVNFGFNHDLKIYQSDLFTNVKGRFDVIISNPPYL-----NCNDKSLDWKALSFEPK 171 Query: 194 ISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228 I+L DG Y I +L K+G +EI Sbjct: 172 IALCAPEDGWYFYDKILKKYKNYLKKNGWLIMEIN 206 >gi|66045094|ref|YP_234935.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Pseudomonas syringae pv. syringae B728a] gi|63255801|gb|AAY36897.1| Modification methylase HemK [Pseudomonas syringae pv. syringae B728a] gi|330973273|gb|EGH73339.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Pseudomonas syringae pv. aceris str. M302273PT] Length = 302 Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 68/219 (31%), Positives = 106/219 (48%), Gaps = 12/219 (5%) Query: 27 DSVLDDRQRFFLTNAIVRSLKHESIHRI-----LGWRDFYNVRLTLSSDTFEPRPETELL 81 DS LD R + + R +K R+ LG F + + PR L Sbjct: 54 DSYLDCRLEVDEISELQRLIKRRIDERVPTPYLLGEAWFCGMSFIVDDRVLIPRSPIAEL 113 Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 ++ A L + RILDL TG+G + +A + P + D+S ALE+A N Sbjct: 114 IEERFAPWL----ADEPARILDLCTGSGCIGIACAEVFPEAEVALADLSYDALEVANQNI 169 Query: 142 VTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200 +G+ +R T+Q D F + G FD+IVSNPPY+++ + E + +P ++L G Sbjct: 170 ERHGMEDRVYTVQGDGFDGLPGQRFDLIVSNPPYVDAEDFADMPDEYQ-HEPELALACGS 228 Query: 201 DGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 DGL+ R + + HLN+ GL VE+G N +V V ++ Sbjct: 229 DGLNLVRRMLAQAADHLNEKGLLIVEVG-NSQVHVQALY 266 >gi|319777685|ref|YP_004137336.1| protoporphyrinogen oxidase [Mycoplasma fermentans M64] gi|318038760|gb|ADV34959.1| Protoporphyrinogen oxidase [Mycoplasma fermentans M64] Length = 237 Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 66/215 (30%), Positives = 107/215 (49%), Gaps = 22/215 (10%) Query: 25 DPDSVLDDRQRFFLTNAIVRS-----LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETE 79 + ++++ +++R+ L I ++ I I+G+ ++ N R+ L PR ETE Sbjct: 3 NEETLILEKKRYGLEPKITEKEYELLRQNYPIQLIMGYVEYLNTRINLREQVLIPRYETE 62 Query: 80 LLVDSALA-FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAK 138 +VD L F+ E +LDL G+G + LA+ K K VDIS +A++ Sbjct: 63 EMVDIYLKEFAAENQE------VLDLCCGSGFIGLAIKKNLRSAKVTLVDISDEAIKQTI 116 Query: 139 SNAVTN-GVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC----LGLEVRDFDPR 193 N++ N G + QSD F++V+G FDVI+SNPPY+ +C L + F+P+ Sbjct: 117 ENSIVNFGFNHDLKIYQSDLFTNVKGRFDVIISNPPYL-----NCNDKSLDWKALSFEPK 171 Query: 194 ISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228 I+L DG Y I +L K+G +EI Sbjct: 172 IALCAPEDGWYFYDKILKKYKNYLKKNGWLIMEIN 206 >gi|217967195|ref|YP_002352701.1| modification methylase, HemK family [Dictyoglomus turgidum DSM 6724] gi|217336294|gb|ACK42087.1| modification methylase, HemK family [Dictyoglomus turgidum DSM 6724] Length = 282 Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 64/219 (29%), Positives = 118/219 (53%), Gaps = 20/219 (9%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110 ++ I+ + FY++ L + PR ETE+L++ A I K +I+++G G+G Sbjct: 70 LNYIIEKKQFYDIELFVERGVLIPRSETEILIEVAKD----TILKEGYKKIVEIGVGSGN 125 Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD-----TLQSDWFSSVEGLF 165 + + L KE K DIS +A+++A+ NA + VS++ + L +V+ F Sbjct: 126 ISITLAKEFKDIKIYACDISPEAIKVARFNAKKHKVSDKIEFFFGFLLYPMVHRNVD--F 183 Query: 166 DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225 ++I+SNPPYI S L EV+ +P +L GG DG YR + + + K+ + Sbjct: 184 ELIISNPPYIASWEFPFLQKEVKK-EPWKALYGGWDGCEFYRKLFTLLKKR-GKNFTAIL 241 Query: 226 EIG---YNQKVDVVR-IFESRKLFLVNAFKDYGGNDRVL 260 EI Y++ +++++ F+S ++ +F+DY G++RV+ Sbjct: 242 EISPYIYHKVLNILKNFFDS---VIIESFRDYLGHERVI 277 >gi|121604711|ref|YP_982040.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Polaromonas naphthalenivorans CJ2] gi|120593680|gb|ABM37119.1| [LSU ribosomal protein L3P]-glutamine N5-methyltransferase [Polaromonas naphthalenivorans CJ2] Length = 298 Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 50/164 (30%), Positives = 87/164 (53%), Gaps = 5/164 (3%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+LDL TG G++ + P DIS AL +A+ N + ++ R ++SD + Sbjct: 135 RVLDLCTGNGSLAILAAMTYPEVVVDAADISPDALAVARINVDRHQLASRITLIESDGLA 194 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 + G +D+I+ NPPY+ + + L E R +P ++L GG DG+ R++ + +N+ Sbjct: 195 NCPGGYDLILCNPPYVNAASMAALPAEFR-AEPGLALAGGADGMDFIRSLFLNAAAQMNE 253 Query: 220 DGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFC 263 + + +EIG N++ + R F K F F+ G+D+VLL Sbjct: 254 NAVLVLEIG-NERENFERAFPHLKPFW---FETSAGSDQVLLLT 293 >gi|54025403|ref|YP_119645.1| putative methyltransferase [Nocardia farcinica IFM 10152] gi|54016911|dbj|BAD58281.1| putative methyltransferase [Nocardia farcinica IFM 10152] Length = 263 Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 56/203 (27%), Positives = 93/203 (45%), Gaps = 14/203 (6%) Query: 38 LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97 L + + + + ++GW +F +R+ + F PR T LVD+ALA + E+ Sbjct: 38 LAELVRQRVSGTPLEYVVGWAEFRGLRVAVRPGVFVPRRRTAFLVDTALAVAR---ERPG 94 Query: 98 VVRILDLGTGTGAVCLALLKE----SPFFKGVGVDISCKALEIAKSNAVTNGV---SERF 150 + ++DL G GA+ LA E + D+ A+ A+ N +G + F Sbjct: 95 TLCVVDLCCGCGALGLAFATEMRAHGRTVELTAADVDPTAVCCARGNLAGHGTVHEGDLF 154 Query: 151 DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210 D L +D + G D++++N PY+ + + + E RD +PR +LDGG DGL +R +A Sbjct: 155 DALPTD----LRGRIDILLANVPYVPTAGIAGMPPEARDHEPRAALDGGADGLDVFRRVA 210 Query: 211 DGVSRHLNKDGLCSVEIGYNQKV 233 L G E Q Sbjct: 211 AAAPDWLAPGGTVFFESSREQAT 233 >gi|329964683|ref|ZP_08301737.1| protein-(glutamine-N5) methyltransferase [Bacteroides fluxus YIT 12057] gi|328525083|gb|EGF52135.1| protein-(glutamine-N5) methyltransferase [Bacteroides fluxus YIT 12057] Length = 247 Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 77/251 (30%), Positives = 108/251 (43%), Gaps = 8/251 (3%) Query: 16 GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75 G S+ + D +L ++ L + R E I + G +F R ++ PR Sbjct: 3 GQSTVDYYLGKDIILSSKEEQELEGILSRLRDFEPIQYVQGGVNFMGHRFRVAPGVLIPR 62 Query: 76 PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135 PETE LV+ L E RILD+GTG+G + ++L K P + V D+S +AL Sbjct: 63 PETEELVEIMLK------EIPAEARILDVGTGSGCIAVSLSKGLPDARVVAWDVSEEALA 116 Query: 136 IAKSNAVTNGVSERFDTLQS-DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194 IA+ N S RF S E +DVIVSNPPY+ + V D++P + Sbjct: 117 IARGNNEALQASVRFALCNVLTCRPSREDRYDVIVSNPPYVLEKERREMERNVLDWEPSL 176 Query: 195 SL-DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDY 253 +L D L YR IA+ L G EI V + + KD Sbjct: 177 ALFVPDTDPLRFYRRIAELGREMLVAGGRLYFEINRAFGEATVAMLCEQGYANARILKDI 236 Query: 254 GGNDRVLLFCR 264 GNDR +L R Sbjct: 237 SGNDRFVLAER 247 >gi|120598374|ref|YP_962948.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Shewanella sp. W3-18-1] gi|120558467|gb|ABM24394.1| modification methylase, HemK family [Shewanella sp. W3-18-1] gi|319426848|gb|ADV54922.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Shewanella putrefaciens 200] Length = 314 Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 61/176 (34%), Positives = 94/176 (53%), Gaps = 7/176 (3%) Query: 91 PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150 P + + V RILDL TG+ + +A E + +DIS AL++A+ N T GV +R Sbjct: 127 PWLYNKPVTRILDLCTGSACIAIACAYEFEDAEVDALDISEDALDVAQINIETLGVMDRV 186 Query: 151 DTLQSDWFSSV-EG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208 +QSD FS++ EG +D+IVSNPPY+++ + + E +P I L G DGL + Sbjct: 187 FPMQSDLFSAIPEGPQYDLIVSNPPYVDAEDIGDMPDEYH-HEPAIGLASGRDGLDLTKR 245 Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 I +++L GL VE+G N V ++ F +N F++ G D V + R Sbjct: 246 ILANAAQYLTPTGLLVVEVG-NSMVHLIEQFPEVPFTWIN-FEN--GGDGVFVLTR 297 >gi|219557201|ref|ZP_03536277.1| hypothetical protein MtubT1_07810 [Mycobacterium tuberculosis T17] Length = 267 Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 67/202 (33%), Positives = 95/202 (47%), Gaps = 12/202 (5%) Query: 50 SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109 + ++G F V L + F PRPETE ++ A A SLP R + I+D TG+G Sbjct: 67 PLQHLIGTVSFGPVVLHVGPGVFVPRPETEAILAWATAQSLP---ARPL--IVDACTGSG 121 Query: 110 AVCLALLKESPFF----KGVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSDWFSSVEGL 164 A+ +AL + + +G+D S AL+ A+ NA V R D ++G Sbjct: 122 ALAVALAQHRANLGLKARIIGIDDSDCALDYARRNAAGTPVELVRADVTTPCLLPELDGQ 181 Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224 D++VSNPPYI V L EV DP +L GG DG++ + R L GL + Sbjct: 182 VDLMVSNPPYIPDAAV--LEPEVAQHDPHHALFGGPDGMTVISAVVGLAGRWLRPGGLFA 239 Query: 225 VEIGYNQKVDVVRIFESRKLFL 246 VE V + S KLF+ Sbjct: 240 VEHDDTTSSSTVDLVSSTKLFV 261 >gi|255029751|ref|ZP_05301702.1| hypothetical protein LmonL_13024 [Listeria monocytogenes LO28] Length = 209 Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 56/161 (34%), Positives = 78/161 (48%), Gaps = 5/161 (3%) Query: 16 GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75 GLS ++ ++ L+ R L E + IL FY ++ D PR Sbjct: 34 GLSRSELWMEISRELEPNHEKQFEEDFARYLAGEPVQYILKTAPFYGYDFLVTEDVLIPR 93 Query: 76 PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135 PETE LV A AF ++K V +LD+ TG+G + +AL K P DIS AL Sbjct: 94 PETEELVACAEAF----LKKHPVKNVLDVCTGSGIIAIALKKAFPEISVTASDISAPALV 149 Query: 136 IAKSNAVTNGVSERF-DTLQSDWFSSVEGLFDVIVSNPPYI 175 +A+ NA+ RF +T + F E FD+IV+NPPYI Sbjct: 150 VARKNALLLNADVRFVETDLLEAFKQNEERFDMIVANPPYI 190 >gi|254385550|ref|ZP_05000876.1| methylase [Streptomyces sp. Mg1] gi|194344421|gb|EDX25387.1| methylase [Streptomyces sp. Mg1] Length = 257 Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 59/203 (29%), Positives = 89/203 (43%), Gaps = 10/203 (4%) Query: 33 RQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPR 92 R L+ + R + E + ++GW F +R+ + F PR +E L A A + Sbjct: 29 RDDGHLSQMLARRVAGEPLEIVVGWAGFCGLRMEVGEGVFVPRRRSEFLASEAAALT--- 85 Query: 93 IEKRDVVRILDLGTGTGAVCLALLKESPFFKGV---GVDISCKALEIAKSNAVTNGVSER 149 R ++DL G GA+ A+ GV DI AL A+ N G Sbjct: 86 --PRAGAVVVDLCCGVGALGAAVADR--VGGGVQLHAADIDPVALAYARRNVAPYGGRVH 141 Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209 L + ++ G DV+V N PY+ + + L E RD +P +SLDGG DGL +R + Sbjct: 142 EGDLYAALPEALRGRVDVLVVNAPYVPTGELGLLPAEARDHEPLVSLDGGADGLDIHRRV 201 Query: 210 ADGVSRHLNKDGLCSVEIGYNQK 232 A + L G +E G +Q Sbjct: 202 AAQAAHWLAPGGHLLIETGEHQH 224 >gi|329734115|gb|EGG70433.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Staphylococcus epidermidis VCU045] Length = 277 Score = 81.6 bits (200), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 72/255 (28%), Positives = 122/255 (47%), Gaps = 20/255 (7%) Query: 14 VTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFE 73 V G S ++ D + L A+ R + E I I+G++ FY + ++ Sbjct: 31 VFGWSKTDYLIHKDEQMSLTSINKLDKALDRMITGEPIQYIVGFQSFYGYQYKVNQHCLI 90 Query: 74 PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133 PRPETE + L F L +K D I D+GTG+GA+ + L P + D+ A Sbjct: 91 PRPETE---EVMLHF-LELCKKTDT--IADIGTGSGAIAITLKLLQPELNVIATDLYEDA 144 Query: 134 LEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYI-ESVIVDCLGLEVRD 189 L +AK NA + +F + L+ + ++ D ++SNPPYI S I+D + V + Sbjct: 145 LNVAKQNASHYHQNIQFLRGNALKPLIENDIK--LDGLISNPPYIGHSEIID-MESRVLN 201 Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ----KVDVVRIFESRKLF 245 ++P +L +G + Y +I + + + + G EIGY+Q K + ++ ++ Sbjct: 202 YEPHHALFAEKNGFAIYESILEDLPFVMKQGGHVVFEIGYSQGDILKRMIQDLYPEKE-- 259 Query: 246 LVNAFKDYGGNDRVL 260 V FKD GN R++ Sbjct: 260 -VEIFKDINGNQRII 273 >gi|329735678|gb|EGG71961.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Staphylococcus epidermidis VCU028] Length = 277 Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 72/255 (28%), Positives = 122/255 (47%), Gaps = 20/255 (7%) Query: 14 VTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFE 73 V G S ++ D + L A+ R + E I I+G++ FY + ++ Sbjct: 31 VFGWSKTDYLIHKDEQMSLTSINKLDKALDRMITGEPIQYIVGFQSFYGYQYKVNQHCLI 90 Query: 74 PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133 PRPETE + L F L +K D I D+GTG+GA+ + L P + D+ A Sbjct: 91 PRPETE---EVMLHF-LELCKKTDT--IADIGTGSGAIAITLKLLQPELNVIATDLYEDA 144 Query: 134 LEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYI-ESVIVDCLGLEVRD 189 L +AK NA + +F + L+ + ++ D ++SNPPYI S I+D + V + Sbjct: 145 LNVAKQNASHYHQNIQFLRGNALKPLIENDIK--LDGLISNPPYIGHSEIID-MESTVLN 201 Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ----KVDVVRIFESRKLF 245 ++P +L +G + Y +I + + + + G EIGY+Q K + ++ ++ Sbjct: 202 YEPHHALFAEKNGFAIYESILEDLPFVMKQGGHVVFEIGYSQGDILKRMIQDLYPEKE-- 259 Query: 246 LVNAFKDYGGNDRVL 260 V FKD GN R++ Sbjct: 260 -VEIFKDINGNQRII 273 >gi|242086244|ref|XP_002443547.1| hypothetical protein SORBIDRAFT_08g021340 [Sorghum bicolor] gi|241944240|gb|EES17385.1| hypothetical protein SORBIDRAFT_08g021340 [Sorghum bicolor] Length = 336 Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 54/169 (31%), Positives = 86/169 (50%), Gaps = 12/169 (7%) Query: 57 WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116 WRD + ++ PRPETE +VD A +E DLGTG+GA+ +A+ Sbjct: 166 WRDLV---VAVAEGVLIPRPETEAVVDMVRA-----VEGFADGWWADLGTGSGAIAVAVA 217 Query: 117 KE-SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNP 172 +E + D+S A+++A+ N GV ++ + WF ++ G ++SNP Sbjct: 218 RELGAHGRVFATDVSEVAIDVARLNVQRYGVQDKVEIRHGSWFEPLQDLKGKLMGVISNP 277 Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221 PYI + + L EV +P+++LDGG DGL H + +G+S L G Sbjct: 278 PYIPTDDLPGLQPEVGWHEPKLALDGGKDGLEHLLHLCEGLSSVLEPGG 326 >gi|317478585|ref|ZP_07937742.1| protein-(glutamine-N5) methyltransferase [Bacteroides sp. 4_1_36] gi|316905226|gb|EFV27023.1| protein-(glutamine-N5) methyltransferase [Bacteroides sp. 4_1_36] Length = 278 Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 78/267 (29%), Positives = 111/267 (41%), Gaps = 12/267 (4%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 +A S C + G S + D +L + L + + R E I + G F Sbjct: 20 EAANLSRIVCCEMLGQSHIDYYLGKDMILSPKDEKELESILFRLCNFEPIQYVQGTARFL 79 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 ++ PRPETE LV+ L P RILD+GTG+G + + L KE P Sbjct: 80 GRTFRVAPGVLIPRPETEELVERMLEEVAP------ASRILDIGTGSGCIAVTLSKELPE 133 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD---WFSSVEGLFDVIVSNPPYIESV 178 + DIS +AL IA N S +F +Q D + + + FDVIVSNPPY+ Sbjct: 134 AEVTAWDISGEALAIAGDNNRLLQTSVQF--VQRDVLTYQPAEDEYFDVIVSNPPYVTET 191 Query: 179 IVDCLGLEVRDFDPRISL-DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237 + V +++P +L D L YR I + L G EI V Sbjct: 192 EKKDMEPNVLNWEPSGALFVPDSDPLRFYRRIGELGRSMLTVGGRLYFEINRAFGEAVAS 251 Query: 238 IFESRKLFLVNAFKDYGGNDRVLLFCR 264 + + V KD GNDR ++ R Sbjct: 252 MLRKQGYTNVRIRKDISGNDRYVIAER 278 >gi|284993169|ref|YP_003411724.1| modification methylase, HemK family [Geodermatophilus obscurus DSM 43160] gi|284066415|gb|ADB77353.1| modification methylase, HemK family [Geodermatophilus obscurus DSM 43160] Length = 287 Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 60/207 (28%), Positives = 87/207 (42%), Gaps = 9/207 (4%) Query: 44 RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR--- 100 R + E + +LGW F +R+ + F PR T LLV+ A+A RD R Sbjct: 49 RRVAGEPLELVLGWTAFCGLRVAVEPGVFVPRQRTALLVERAVAL------LRDAPRTPL 102 Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 ++DL G+GAV LA+ + D+ A+ A+ N G L + + Sbjct: 103 VVDLCCGSGAVGLAVATALGPVELHAADVDPAAVRCARRNLAGVGGRVHQGDLYAALPAG 162 Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220 + G D++ N PY+ S + + E RD +PR +LDGG DG R +A L Sbjct: 163 LRGRVDLLAVNAPYVPSAALALMPPEARDHEPRTALDGGPDGTGLQRRVAAEARDWLAPG 222 Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLV 247 G VE Q E L V Sbjct: 223 GSLIVETSVRQAPHTAAAVEGAGLRAV 249 >gi|203284117|ref|YP_002221857.1| HemK family methylase [Borrelia duttonii Ly] gi|201083560|gb|ACH93151.1| HemK family methylase [Borrelia duttonii Ly] Length = 277 Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 64/219 (29%), Positives = 106/219 (48%), Gaps = 20/219 (9%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110 IH ILG ++F ++ ++ PR +TE LV+ AL +I+K ++ +ILDL G+G Sbjct: 64 IHYILGTKEFMGIKFYINKHVLIPRDDTECLVEEALI----QIKKNNLSKILDLCCGSGC 119 Query: 111 VCLAL---LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDV 167 + L + LK+ K DIS +AL+++ N ++ + +S+ + F++ Sbjct: 120 IGLTIAYYLKQ----KVTLADISAQALKVSLKNTQRLNLTNHIEIKRSNLLKYIGKKFEL 175 Query: 168 IVSNPPYI---ESVIVDCLGLEVRDFDPRISLDG-GIDGLSHYRTIADGVSRHLNKDGLC 223 I++NPPY+ E I + L E PRI+L G G DGL + I L K+GL Sbjct: 176 IITNPPYLTKDELRIKEKLAKE-----PRIALLGFGQDGLKIAKKIIKQAKYKLTKNGLL 230 Query: 224 SVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262 +E+ QK + + + D +R LL Sbjct: 231 ILEMAPWQKKSLEKFAIQEGFTSLKTIYDIENRERALLL 269 >gi|330889872|gb|EGH22533.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Pseudomonas syringae pv. mori str. 301020] Length = 302 Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 60/187 (32%), Positives = 95/187 (50%), Gaps = 7/187 (3%) Query: 54 ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113 +LG F + + PR L++ A L + RILDL TG+G + + Sbjct: 86 LLGEAWFCGMSFIVDDRVLIPRSPIAELIEERFAPWL----ADEPARILDLCTGSGCIGI 141 Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNP 172 A + P + D+S ALE+A N +G+ +R T+Q D F + G FD+IVSNP Sbjct: 142 ACAEVFPEAEVALADLSYDALEVANQNIERHGMEDRVYTVQGDGFDGLPGQRFDLIVSNP 201 Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232 PY+++ + E + +P ++L G DGL+ R + + HLN+ GL VE+G N + Sbjct: 202 PYVDAEDFADMPDEYQ-HEPELALACGSDGLNLVRRMLAQAADHLNEKGLLIVEVG-NSQ 259 Query: 233 VDVVRIF 239 V V ++ Sbjct: 260 VHVQALY 266 >gi|270295601|ref|ZP_06201802.1| conserved hypothetical protein [Bacteroides sp. D20] gi|270274848|gb|EFA20709.1| conserved hypothetical protein [Bacteroides sp. D20] Length = 278 Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 78/267 (29%), Positives = 111/267 (41%), Gaps = 12/267 (4%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 +A S C + G S + D +L + L + + R E I + G F Sbjct: 20 EAANLSRIVCCEMLGQSHIDYYLGKDMILSPKDEKELESILSRLCNFEPIQYVQGTARFL 79 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 ++ PRPETE LV+ L P RILD+GTG+G + + L KE P Sbjct: 80 GRTFRVAPGVLIPRPETEELVERMLEEVAP------ASRILDIGTGSGCIAVTLSKELPE 133 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD---WFSSVEGLFDVIVSNPPYIESV 178 + DIS +AL IA N S +F +Q D + + + FDVIVSNPPY+ Sbjct: 134 AEVTAWDISGEALAIAGDNNRLLQTSVQF--VQRDVLTYQPTEDEYFDVIVSNPPYVTET 191 Query: 179 IVDCLGLEVRDFDPRISL-DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237 + V +++P +L D L YR I + L G EI V Sbjct: 192 EKKDMEPNVLNWEPSGALFVPDSDPLRFYRRIGELGRSMLTVGGRLYFEINRAFGEAVAS 251 Query: 238 IFESRKLFLVNAFKDYGGNDRVLLFCR 264 + + V KD GNDR ++ R Sbjct: 252 MLRKQGYTNVRIRKDISGNDRYVIAER 278 >gi|170720621|ref|YP_001748309.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Pseudomonas putida W619] gi|169758624|gb|ACA71940.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Pseudomonas putida W619] Length = 302 Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 62/207 (29%), Positives = 101/207 (48%), Gaps = 7/207 (3%) Query: 27 DSVLDDRQRFFLTNAIVRSLKHE-SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85 D L+D +R L + + R ++ +LG F + + PR L++ Sbjct: 58 DCQLEDDERVRLQHLLKRRIEDRVPTAYLLGEAWFCGMSFIVDERVLVPRSPIGELIEKR 117 Query: 86 LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145 L + RILDL TG+G + + + P + V D+S +ALE+A N +G Sbjct: 118 FEPWL----ANEPARILDLCTGSGCIGIVAAEVFPEAEVVLADLSFEALEVANQNIERHG 173 Query: 146 VSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204 + ER T+Q D F+ + G FD+I+SNPPY+++ + E +P + L G DGL Sbjct: 174 LDERVYTVQGDGFAGLPGQRFDLILSNPPYVDAEDFGDMPAEYH-HEPEMGLACGNDGLD 232 Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQ 231 R + + HL++ GL VE+G +Q Sbjct: 233 LVRRMLAEAAEHLSEKGLLIVEVGNSQ 259 >gi|27468633|ref|NP_765270.1| protoporphyrinogen oxidase [Staphylococcus epidermidis ATCC 12228] gi|57867592|ref|YP_189288.1| HemK family modification methylase [Staphylococcus epidermidis RP62A] gi|251812172|ref|ZP_04826645.1| HemK family methyltransferase [Staphylococcus epidermidis BCM-HMP0060] gi|282876475|ref|ZP_06285341.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Staphylococcus epidermidis SK135] gi|293366081|ref|ZP_06612769.1| protein-(glutamine-N5) methyltransferase [Staphylococcus epidermidis M23864:W2(grey)] gi|27316180|gb|AAO05314.1|AE016749_260 protoporphyrinogen oxidase [Staphylococcus epidermidis ATCC 12228] gi|57638250|gb|AAW55038.1| modification methylase, HemK family [Staphylococcus epidermidis RP62A] gi|251804269|gb|EES56926.1| HemK family methyltransferase [Staphylococcus epidermidis BCM-HMP0060] gi|281294727|gb|EFA87255.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Staphylococcus epidermidis SK135] gi|291319804|gb|EFE60162.1| protein-(glutamine-N5) methyltransferase [Staphylococcus epidermidis M23864:W2(grey)] Length = 278 Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 68/231 (29%), Positives = 115/231 (49%), Gaps = 20/231 (8%) Query: 38 LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97 L A+ R + E I I+G++ FY + ++ PRPETE + L F L +K D Sbjct: 56 LDKALDRMITGEPIQYIVGFQSFYGYQYKVNQHCLIPRPETE---EVMLHF-LELCKKTD 111 Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQ 154 I D+GTG+GA+ + L P + D+ AL +AK NA + +F + L+ Sbjct: 112 T--IADIGTGSGAIAITLKLLQPELNVIATDLYEDALNVAKQNASHYHQNIQFLRGNALK 169 Query: 155 SDWFSSVEGLFDVIVSNPPYI-ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213 + ++ D ++SNPPYI S I+D + V +++P +L +G + Y +I + + Sbjct: 170 PLIENDIK--LDGLISNPPYIGHSEIID-MESTVLNYEPHHALFAEKNGFAIYESILEDL 226 Query: 214 SRHLNKDGLCSVEIGYNQ----KVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 + + G EIGY+Q K + ++ ++ V FKD GN R++ Sbjct: 227 PFVMKQGGHVVFEIGYSQGDILKRMIQDLYPEKE---VEIFKDINGNQRII 274 >gi|289569312|ref|ZP_06449539.1| hypothetical protein hemK [Mycobacterium tuberculosis T17] gi|289543066|gb|EFD46714.1| hypothetical protein hemK [Mycobacterium tuberculosis T17] Length = 288 Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 67/201 (33%), Positives = 95/201 (47%), Gaps = 12/201 (5%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110 + ++G F V L + F PRPETE ++ A A SLP R + I+D TG+GA Sbjct: 89 LQHLIGTVSFGPVVLHVGPGVFVPRPETEAILAWATAQSLP---ARPL--IVDACTGSGA 143 Query: 111 VCLALLKESPFF----KGVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSDWFSSVEGLF 165 + +AL + + +G+D S AL+ A+ NA V R D ++G Sbjct: 144 LAVALAQHRANLGLKARIIGIDDSDCALDYARRNAAGTPVELVRADVTTPCLLPELDGQV 203 Query: 166 DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225 D++VSNPPYI V L EV DP +L GG DG++ + R L GL +V Sbjct: 204 DLMVSNPPYIPDAAV--LEPEVAQHDPHHALFGGPDGMTVISAVVGLAGRWLRPGGLFAV 261 Query: 226 EIGYNQKVDVVRIFESRKLFL 246 E V + S KLF+ Sbjct: 262 EHDDTTSSSTVDLVSSTKLFV 282 >gi|242241524|ref|ZP_04795969.1| HemK family methyltransferase [Staphylococcus epidermidis W23144] gi|242235067|gb|EES37378.1| HemK family methyltransferase [Staphylococcus epidermidis W23144] Length = 278 Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 69/234 (29%), Positives = 113/234 (48%), Gaps = 26/234 (11%) Query: 38 LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97 L A+ R + E I I+G++ FY + ++ PRPETE + L F L +K D Sbjct: 56 LDKALDRMVTGEPIQYIVGFQSFYGYQFKVNQHCLIPRPETE---EVMLHF-LELCKKTD 111 Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 I D+GTG+GA+ + L P + D+ AL +AK NA S +Q Sbjct: 112 T--IADIGTGSGAIAITLKLLQPELNVIATDLYEDALSVAKQNA-----SHYHQNIQFLR 164 Query: 158 FSSVEGL------FDVIVSNPPYI-ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210 ++++ L D ++SNPPYI S I+D + V +++P +L +G + Y +I Sbjct: 165 GNALKPLIEKDIKLDGLISNPPYIGHSEIID-MESTVLNYEPHHALFAEKNGFAIYESIL 223 Query: 211 DGVSRHLNKDGLCSVEIGYNQ----KVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 + + + + G EIGY Q K + ++ ++ V FKD GN R++ Sbjct: 224 EDLPFVMKQGGHVVFEIGYQQGDILKRMIQDLYPEKE---VEIFKDINGNQRII 274 >gi|219684666|ref|ZP_03539609.1| putative protoporphyrinogen oxidase [Borrelia garinii PBr] gi|219672028|gb|EED29082.1| putative protoporphyrinogen oxidase [Borrelia garinii PBr] Length = 273 Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 60/212 (28%), Positives = 105/212 (49%), Gaps = 20/212 (9%) Query: 22 VIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELL 81 +I + L R++ + I + K IH IL ++F + +L+ PR +TE L Sbjct: 35 IIANIKKSLTKREKKLFFDQIDKIEKGTPIHYILQKKEFMGIEFSLNKHVLIPRFDTECL 94 Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV---DISCKALEIAK 138 V+ AL +I++ +ILDL G+G + L++ ++ V DIS KAL+I + Sbjct: 95 VEEALI----QIQQNGFKKILDLCCGSGCIGLSI----AYYTKKKVTLSDISIKALKIVE 146 Query: 139 SNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRD---FDPRIS 195 N + + + ++S+ ++ FD+I++NPPY+ LE+++ +P + Sbjct: 147 KNTKKLKLEKFIEIIRSNLLKCIKERFDIIITNPPYLNKE-----ELEIKNKIKKEPAKA 201 Query: 196 LDG-GIDGLSHYRTIADGVSRHLNKDGLCSVE 226 L G G DGL+ R I LN +GL +E Sbjct: 202 LLGFGKDGLNISRKILSQAKEKLNPNGLIIIE 233 >gi|330961304|gb|EGH61564.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Pseudomonas syringae pv. maculicola str. ES4326] Length = 302 Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 52/141 (36%), Positives = 80/141 (56%), Gaps = 3/141 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 RILDL TG+G + +A E P + D+S ALE+A N +G+ +R T+Q D F Sbjct: 128 RILDLCTGSGCIGIACADEFPEAEVALADLSYDALEVANQNIERHGMEDRVYTVQGDGFD 187 Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 + G FD+IVSNPPY+++ + E + +P ++L G DGL+ R + + HL Sbjct: 188 GLPGQRFDLIVSNPPYVDAEDFADMPDEYQ-HEPELALACGSDGLNLVRRMLAQAADHLT 246 Query: 219 KDGLCSVEIGYNQKVDVVRIF 239 + GL VE+G N +V V ++ Sbjct: 247 EKGLLIVEVG-NSQVHVQALY 266 >gi|288957889|ref|YP_003448230.1| adenine-specific DNA-methyltransferase [Azospirillum sp. B510] gi|288910197|dbj|BAI71686.1| adenine-specific DNA-methyltransferase [Azospirillum sp. B510] Length = 310 Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 51/139 (36%), Positives = 77/139 (55%), Gaps = 6/139 (4%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVSERFDTLQS 155 V R+LDL TG+G CLA+L F + VD+S ALE+AK N +G +R Q Sbjct: 141 VERVLDLCTGSG--CLAILAARIFPEAQVDAVDLSPDALEVAKRNVADSGFEDRITLHQG 198 Query: 156 DWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214 D F+ ++ +DVI++NPPY+++ + L E R +P ++L GG DGL R I Sbjct: 199 DLFAPLKTRKYDVIITNPPYVDAEAMGALPPEFR-AEPEMALAGGDDGLDIVRRILKEAP 257 Query: 215 RHLNKDGLCSVEIGYNQKV 233 +HL +G E G +++ Sbjct: 258 KHLTPEGGLLCEFGTGREI 276 >gi|153001286|ref|YP_001366967.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Shewanella baltica OS185] gi|160875957|ref|YP_001555273.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Shewanella baltica OS195] gi|217972783|ref|YP_002357534.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Shewanella baltica OS223] gi|304411862|ref|ZP_07393473.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Shewanella baltica OS183] gi|307303370|ref|ZP_07583125.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Shewanella baltica BA175] gi|151365904|gb|ABS08904.1| modification methylase, HemK family [Shewanella baltica OS185] gi|160861479|gb|ABX50013.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Shewanella baltica OS195] gi|217497918|gb|ACK46111.1| modification methylase, HemK family [Shewanella baltica OS223] gi|304349722|gb|EFM14129.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Shewanella baltica OS183] gi|306913730|gb|EFN44152.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Shewanella baltica BA175] gi|315268152|gb|ADT95005.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Shewanella baltica OS678] Length = 314 Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 61/176 (34%), Positives = 94/176 (53%), Gaps = 7/176 (3%) Query: 91 PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150 P + + V RILDL TG+ + +A E + +DIS AL++A+ N T GV +R Sbjct: 127 PWLYGKPVTRILDLCTGSACIAIACAYEFEDAEVDALDISEDALDVAQINIETLGVMDRV 186 Query: 151 DTLQSDWFSSV-EG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208 +QSD FS++ EG +D+IVSNPPY+++ + + E +P I L G DGL + Sbjct: 187 FPMQSDLFSAIPEGPQYDLIVSNPPYVDAEDIGDMPDEYH-HEPAIGLASGRDGLDLTKR 245 Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 I +++L GL VE+G N V ++ F +N F++ G D V + R Sbjct: 246 ILANAAQYLTPTGLLVVEVG-NSMVHLIEQFPEVPFTWIN-FEN--GGDGVFVLTR 297 >gi|51598457|ref|YP_072645.1| HemK family methylase [Borrelia garinii PBi] gi|51573028|gb|AAU07053.1| HemK family methylase, putative [Borrelia garinii PBi] Length = 273 Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 60/212 (28%), Positives = 104/212 (49%), Gaps = 20/212 (9%) Query: 22 VIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELL 81 +I + L R++ + I + K IH IL ++F + +L+ PR +TE L Sbjct: 35 IIANIKKSLTKREKKLFFDQIDKMKKGTPIHYILQKKEFMGIEFSLNKHVLIPRFDTECL 94 Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV---DISCKALEIAK 138 V+ AL +I++ +ILDL G+G + L++ ++ V DIS KAL+I + Sbjct: 95 VEEALI----QIQQNGFKKILDLCCGSGCIGLSI----AYYTKKKVTLSDISIKALKIVE 146 Query: 139 SNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRD---FDPRIS 195 N + + + + S+ ++ FD+I++NPPY+ LE+++ +P + Sbjct: 147 KNTKKLKLEKFIEIIHSNLLKFIKERFDIIITNPPYLNKE-----ELEIKNKIKKEPAKA 201 Query: 196 LDG-GIDGLSHYRTIADGVSRHLNKDGLCSVE 226 L G G DGL+ R I LN +GL +E Sbjct: 202 LLGFGKDGLNISRKILSQAKEKLNPNGLIIIE 233 >gi|33592830|ref|NP_880474.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Bordetella pertussis Tohama I] gi|33572478|emb|CAE42049.1| putative adenine-specific methylase [Bordetella pertussis Tohama I] gi|332382243|gb|AEE67090.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Bordetella pertussis CS] Length = 298 Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 56/162 (34%), Positives = 83/162 (51%), Gaps = 10/162 (6%) Query: 74 PRPETELLVDSALAFSLPRI-EKRDVVRILDLGTGTGAVCLALLKES--PFFKGVGVDIS 130 PR L+D LA P + + V R LD+ TG+G CLA+L P + VD+S Sbjct: 109 PRSPIAELLDEGLA---PWVRDPLQVERALDMCTGSG--CLAILAALAFPVAQVDAVDVS 163 Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRD 189 ALE+A N G+ +R Q + F ++ +DVIV NPPY+ + L E R Sbjct: 164 SDALEVAARNVAEYGLQDRLTLRQGNLFEALPAAAYDVIVCNPPYVNQASMGALPQEYR- 222 Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231 +P ++L GG DG+ R I +L+ DG+ +EIG+ + Sbjct: 223 HEPALALAGGADGMDLVRRILAAAPGYLSADGVLVLEIGHER 264 >gi|21243453|ref|NP_643035.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Xanthomonas axonopodis pv. citri str. 306] gi|21109008|gb|AAM37571.1| adenine-specific methylase [Xanthomonas axonopodis pv. citri str. 306] Length = 308 Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 58/176 (32%), Positives = 91/176 (51%), Gaps = 7/176 (3%) Query: 74 PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133 PR L+++ P + R+V R LDL TG+G + +A+ +P + GVDIS A Sbjct: 109 PRSPIAELIEAGFE---PWLGGREVTRALDLCTGSGCIAIAMGHYNPQWDVDGVDISDDA 165 Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDP 192 L +A N ++ L+SD FS + G +D+IV+NPPY+ + D L E ++P Sbjct: 166 LALAAENKARLH-ADNITLLKSDLFSGLGGRQYDLIVTNPPYVTNEETDALPQEY-SYEP 223 Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN 248 + L G DGL I +HL++DGL E+G +++ +VR+ L V Sbjct: 224 ELGLRAGDDGLDLVLKILRDAPQHLSEDGLLICEVGESEQ-HLVRLLPEVDLAWVE 278 >gi|319893068|ref|YP_004149943.1| Methylase of polypeptide chain release factors [Staphylococcus pseudintermedius HKU10-03] gi|317162764|gb|ADV06307.1| Methylase of polypeptide chain release factors [Staphylococcus pseudintermedius HKU10-03] gi|323463877|gb|ADX76030.1| methyltransferase, HemK family protein [Staphylococcus pseudintermedius ED99] Length = 280 Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 61/230 (26%), Positives = 106/230 (46%), Gaps = 14/230 (6%) Query: 38 LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97 L + + + L + ++G +FY + ++SD PRPETE +V + L ++ Sbjct: 55 LNDGLSQLLTGMPVQYVVGQSEFYGRQFKVNSDVLIPRPETEEVVH----YFLTQLAAAK 110 Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 VV D+G G+GA+ + L E P + + DIS +AL +A+ NA + LQ + Sbjct: 111 VVA--DIGVGSGAIAITLKAERPELRVIATDISFQALAVARENA--QRLQRDITFLQGNA 166 Query: 158 FSSV---EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214 + + D ++SNPPYI + V ++P ++L +G Y I + Sbjct: 167 LQPLIDQDVRLDGLISNPPYIGEHERTLMDNSVIQYEPHVALFAAQEGYQVYAAILRDLP 226 Query: 215 RHLNKDGLCSV-EIGYNQKVDVVRIFESRKLFLV-NAFKDYGGNDRVLLF 262 H+ +DG V EIG+ Q + R+ + + D G+ R+ F Sbjct: 227 -HVMQDGAPVVFEIGFQQGAQLTRMMQQLYPHITPEVINDINGHARIFHF 275 >gi|219685801|ref|ZP_03540610.1| putative protoporphyrinogen oxidase [Borrelia garinii Far04] gi|219672634|gb|EED29664.1| putative protoporphyrinogen oxidase [Borrelia garinii Far04] Length = 273 Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 60/212 (28%), Positives = 105/212 (49%), Gaps = 20/212 (9%) Query: 22 VIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELL 81 +I + L R++ + I + K IH IL ++F + +L+ PR +TE L Sbjct: 35 IIANIKKSLTKREKKLFFDQIDKIEKGTPIHYILQKKEFMGIEFSLNKHVLIPRFDTECL 94 Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV---DISCKALEIAK 138 V+ AL +I++ +ILDL G+G + L++ ++ V DIS KAL+I + Sbjct: 95 VEEALI----QIQQNGFKKILDLCCGSGCIGLSI----AYYTKKKVTLSDISIKALKIVE 146 Query: 139 SNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRD---FDPRIS 195 N + + + ++S+ ++ FD+I++NPPY+ LE+++ +P + Sbjct: 147 KNTKKLKLEKFIEIIRSNLLKCIKERFDIIITNPPYLNKE-----ELEIKNKIKKEPAKA 201 Query: 196 LDG-GIDGLSHYRTIADGVSRHLNKDGLCSVE 226 L G G DGL+ R I LN +GL +E Sbjct: 202 LLGFGKDGLNISRKILSQAKEKLNPNGLIIIE 233 >gi|330897669|gb|EGH29088.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Pseudomonas syringae pv. japonica str. M301072PT] gi|330940028|gb|EGH43220.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Pseudomonas syringae pv. pisi str. 1704B] Length = 302 Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 50/134 (37%), Positives = 77/134 (57%), Gaps = 2/134 (1%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 RILDL TG+G + +A + P + D+S ALE+A N +G+ +R T+Q D F Sbjct: 127 ARILDLCTGSGCIGIACAEVFPDAEVALADLSYDALEVANQNIERHGMEDRVYTVQGDGF 186 Query: 159 SSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217 + G FD+IVSNPPY+++ + E + +P ++L G DGL+ R + + HL Sbjct: 187 DGLPGQRFDLIVSNPPYVDAEDFADMPDEYQ-HEPELALACGSDGLNLVRRMLAQAADHL 245 Query: 218 NKDGLCSVEIGYNQ 231 N+ GL VE+G +Q Sbjct: 246 NEKGLLIVEVGNSQ 259 >gi|148549090|ref|YP_001269192.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Pseudomonas putida F1] gi|148513148|gb|ABQ80008.1| modification methylase, HemK family [Pseudomonas putida F1] gi|313500007|gb|ADR61373.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Pseudomonas putida BIRD-1] Length = 302 Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 62/207 (29%), Positives = 99/207 (47%), Gaps = 7/207 (3%) Query: 27 DSVLDDRQRFFLTNAIVRSLKHE-SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85 D +L+D +R L + + R ++ +LG F + + PR L++ Sbjct: 58 DCMLEDDERVRLQHLLKRRIEERVPAAYLLGEAWFCGMSFIVDERVLVPRSPIGQLIEKR 117 Query: 86 LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145 L + RILDL TG+G + + P + V D+S +ALE+A N +G Sbjct: 118 FEPWL----ASEPARILDLCTGSGCIGIVAADVFPEAEVVLADLSFQALEVANQNIERHG 173 Query: 146 VSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204 + R T+Q D F + G FD+I+SNPPY+++ D + E +P + L G DGL Sbjct: 174 LDGRVYTVQGDGFGGLPGQRFDLILSNPPYVDAEDFDDMPAEYH-HEPELGLACGSDGLD 232 Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQ 231 R + + HL + GL VE+G +Q Sbjct: 233 LVRRMLAEAADHLTEKGLLIVEVGNSQ 259 >gi|126174960|ref|YP_001051109.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Shewanella baltica OS155] gi|125998165|gb|ABN62240.1| modification methylase, HemK family [Shewanella baltica OS155] Length = 314 Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 61/176 (34%), Positives = 94/176 (53%), Gaps = 7/176 (3%) Query: 91 PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150 P + + V RILDL TG+ + +A E + +DIS AL++A+ N T GV +R Sbjct: 127 PWLYGKPVTRILDLCTGSACIAIACAYEFEDAEVDALDISEDALDVAQINIETLGVMDRV 186 Query: 151 DTLQSDWFSSV-EG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208 +QSD FS++ EG +D+IVSNPPY+++ + + E +P I L G DGL + Sbjct: 187 FPMQSDLFSAIPEGPQYDLIVSNPPYVDAEDIGDMPDEYH-HEPAIGLASGRDGLDLTKR 245 Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 I +++L GL VE+G N V ++ F +N F++ G D V + R Sbjct: 246 ILANTAQYLTPTGLLVVEVG-NSMVHLIEQFPEVPFTWIN-FEN--GGDGVFVLTR 297 >gi|15596875|ref|NP_250369.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Pseudomonas aeruginosa PAO1] gi|107101109|ref|ZP_01365027.1| hypothetical protein PaerPA_01002141 [Pseudomonas aeruginosa PACS2] gi|116049627|ref|YP_791568.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Pseudomonas aeruginosa UCBPP-PA14] gi|218892367|ref|YP_002441234.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Pseudomonas aeruginosa LESB58] gi|254234778|ref|ZP_04928101.1| hypothetical protein PACG_00647 [Pseudomonas aeruginosa C3719] gi|296389941|ref|ZP_06879416.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Pseudomonas aeruginosa PAb1] gi|313110363|ref|ZP_07796252.1| putative DNA methylase [Pseudomonas aeruginosa 39016] gi|18203013|sp|Q9I347|Y1678_PSEAE RecName: Full=Uncharacterized adenine-specific methylase PA1678 gi|9947650|gb|AAG05067.1|AE004595_6 probable DNA methylase [Pseudomonas aeruginosa PAO1] gi|115584848|gb|ABJ10863.1| putative DNA methylase [Pseudomonas aeruginosa UCBPP-PA14] gi|126166709|gb|EAZ52220.1| hypothetical protein PACG_00647 [Pseudomonas aeruginosa C3719] gi|218772593|emb|CAW28376.1| probable DNA methylase [Pseudomonas aeruginosa LESB58] gi|310882754|gb|EFQ41348.1| putative DNA methylase [Pseudomonas aeruginosa 39016] Length = 304 Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 66/215 (30%), Positives = 104/215 (48%), Gaps = 8/215 (3%) Query: 27 DSVLDDRQRFFLTNAIVRSLKHE-SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85 D L+D +R L + R ++ +LG F + ++ PR L++ Sbjct: 58 DCRLEDDERAELAEILRRRIEERIPAAYLLGEAWFCGIPFSVDERVLVPRSPIAELIEQR 117 Query: 86 LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145 A LP + RILDL TG+G + +A + V D+S ALE+A N + Sbjct: 118 FAPWLPA----EPARILDLCTGSGCIGIACAYAFEQAEVVLADLSFDALEVANVNIERHD 173 Query: 146 VSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204 + ER T+Q D F+ + G FD+IVSNPPY+++ + E +P + L G DGL Sbjct: 174 LGERVYTVQGDGFAGLPGQRFDLIVSNPPYVDAEDFADMPAEFH-HEPELGLACGDDGLD 232 Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 R + + HL++ GL VE+G N +V V ++ Sbjct: 233 LVRRMLAEAADHLSEKGLLIVEVG-NSEVHVQALY 266 >gi|260906197|ref|ZP_05914519.1| methyltransferase [Brevibacterium linens BL2] Length = 295 Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 74/236 (31%), Positives = 102/236 (43%), Gaps = 20/236 (8%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101 I R + + I+G F ++ L + F PRPETELLV L L R + V I Sbjct: 61 IDRRRQRTPLQHIIGVAAFRHLELQVGPGVFVPRPETELLVTEVLE-ELERQQNTHVPFI 119 Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN--AVTNG------VSERFDTL 153 +DL +G+GA+ L+L E + +GV+ +AL + N AV G VS T Sbjct: 120 IDLCSGSGAITLSLATEHRRLRAIGVERETQALNWSLMNLAAVDLGESSVDLVSGDATTF 179 Query: 154 QSD----WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209 D W S+ DV+V+NPPY+ V EVR+ DP +L GG GL I Sbjct: 180 AEDSPQLWASA-----DVVVTNPPYVPDTAV-PRDAEVREHDPEAALYGGATGLEIPGLI 233 Query: 210 ADGVSRHLNKDGLCSVEIGYNQKVDVVR-IFESRKLFLVNAFKDYGGNDRVLLFCR 264 + L G +E Q I + L + DY G DR + R Sbjct: 234 IIQAEKLLRPGGFFIMEHSEEQGPAARELIMSTASLRQAATYPDYTGRDRYTVAHR 289 >gi|146293548|ref|YP_001183972.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Shewanella putrefaciens CN-32] gi|145565238|gb|ABP76173.1| modification methylase, HemK family [Shewanella putrefaciens CN-32] Length = 314 Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 61/176 (34%), Positives = 93/176 (52%), Gaps = 7/176 (3%) Query: 91 PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150 P + + V RILDL TG+ + +A E + +DIS AL++A+ N T GV +R Sbjct: 127 PWLYNKPVTRILDLCTGSACIAIACAYEFEDAEVDALDISEDALDVAQINIETLGVMDRV 186 Query: 151 DTLQSDWFSSV-EG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208 +QSD FS + EG +D+IVSNPPY+++ + + E +P I L G DGL + Sbjct: 187 FPMQSDLFSGIPEGPQYDLIVSNPPYVDAEDIGDMPDEYH-HEPAIGLASGRDGLDLTKR 245 Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 I +++L GL VE+G N V ++ F +N F++ G D V + R Sbjct: 246 ILANAAQYLTPTGLLVVEVG-NSMVHLIEQFPEVPFTWIN-FEN--GGDGVFVLTR 297 >gi|24374600|ref|NP_718643.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Shewanella oneidensis MR-1] gi|24349214|gb|AAN56087.1|AE015744_8 hemK family protein [Shewanella oneidensis MR-1] Length = 305 Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 62/176 (35%), Positives = 94/176 (53%), Gaps = 7/176 (3%) Query: 91 PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150 P + + V RILDL TG+G + +A E + +DIS AL++A+ N T GV +R Sbjct: 118 PWLYGKPVNRILDLCTGSGCIAIACAYEFDEAEVDALDISEDALDVAQVNVETLGVMDRV 177 Query: 151 DTLQSDWFSSV-EG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208 +QSD FS++ EG +D+IVSNPPY++ + + E +P I L G DGL + Sbjct: 178 FPMQSDLFSAIPEGPQYDLIVSNPPYVDEEDIGDMPDEYH-HEPAIGLASGRDGLDLTKR 236 Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 I +++L G+ VE+G N V ++ F VN F++ G D V + R Sbjct: 237 ILANAAQYLTPTGILVVEVG-NSMVHLMEQFPEVPFTWVN-FEN--GGDGVFVLTR 288 >gi|16265092|ref|NP_437884.1| putative modification methylase protein [Sinorhizobium meliloti 1021] gi|15141231|emb|CAC49744.1| putative modification methylase protein [Sinorhizobium meliloti 1021] Length = 275 Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 63/212 (29%), Positives = 97/212 (45%), Gaps = 11/212 (5%) Query: 60 FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119 F V L L+ D PR ETELL +A A E+ ++D+ G+G + L + +E Sbjct: 53 FMGVDLELAPDVLVPREETELLGRNAAAIL---TERAGPATVIDMCCGSGNLALGIAEEV 109 Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS-----VEGLFDVIVSNPPY 174 P + G D++ + +A+ N + +R Q D F++ +EG D+IV NPPY Sbjct: 110 PLARVWGADLTDSTVALARRNVDRLSLGDRVVIRQGDLFTALAGEDLEGAVDMIVCNPPY 169 Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLS-HYRTIADGVSRHLNKDGLCSVEIGYNQKV 233 I + ++ + +PR + DGG G+S H R I + V+ L G E G Q Sbjct: 170 ISTSRLEGDSAHLLASEPREAFDGGPYGISIHQRLIREAVA-FLKPGGWLLFEFGEGQDR 228 Query: 234 DVVRIFESRKLFLVNAF-KDYGGNDRVLLFCR 264 + K + F +D G RV L R Sbjct: 229 QATALLARTKAYEAVTFAEDSAGKPRVALARR 260 >gi|221124898|ref|XP_002156820.1| PREDICTED: similar to protein-(glutamine-N5) methyl transferase, putative [Hydra magnipapillata] Length = 551 Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 55/190 (28%), Positives = 94/190 (49%), Gaps = 18/190 (9%) Query: 43 VRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRIL 102 R L E + ++ DF + L++ F PRPETE P ++K + L Sbjct: 333 TRRLNREPLQYLIEEWDFRLMTLSMKKPVFIPRPETE-----------PYLKKDS--KFL 379 Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS--DWFSS 160 ++G G+GA+ LA L E + + +D + A+ + + NA GV++R + L D + Sbjct: 380 EVGCGSGAISLAFLTELSTVRCIALDKNQDAVSLTQENAQKLGVADRINVLHKTLDELTL 439 Query: 161 VEG---LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217 ++ FD+++SNPPYI + L EV+ ++ +LDGG DGL R+I + + Sbjct: 440 LDAGGEKFDMLISNPPYIPHKEMAFLQEEVKIYEHHDALDGGYDGLEVIRSILRSAHKFV 499 Query: 218 NKDGLCSVEI 227 G +E+ Sbjct: 500 CSQGYVWLEV 509 >gi|167032417|ref|YP_001667648.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Pseudomonas putida GB-1] gi|166858905|gb|ABY97312.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Pseudomonas putida GB-1] Length = 302 Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 62/207 (29%), Positives = 99/207 (47%), Gaps = 7/207 (3%) Query: 27 DSVLDDRQRFFLTNAIVRSLKHE-SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85 D +L+D +R L + + R ++ +LG F + + PR L++ Sbjct: 58 DCMLEDDERVRLQHLLKRRIEERVPAAYLLGEAWFCGMSFIVDERVLVPRSPIGELIEKR 117 Query: 86 LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145 L + RILDL TG+G + + + P + V D+S +ALE+A N +G Sbjct: 118 FEPWL----ASEPARILDLCTGSGCIGIVAAEVFPEAEVVLADLSFQALEVANQNIERHG 173 Query: 146 VSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204 + R T+Q D F + G FD+I+SNPPY+++ D + E +P + L G DGL Sbjct: 174 LDTRVYTVQGDGFGGLPGQRFDLILSNPPYVDAEDFDDMPAEYH-HEPELGLACGNDGLD 232 Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQ 231 R + + HL GL VE+G +Q Sbjct: 233 LVRRMLAEAADHLTDKGLLIVEVGNSQ 259 >gi|307309486|ref|ZP_07589142.1| methyltransferase small [Sinorhizobium meliloti BL225C] gi|307320603|ref|ZP_07600017.1| methyltransferase small [Sinorhizobium meliloti AK83] gi|306893753|gb|EFN24525.1| methyltransferase small [Sinorhizobium meliloti AK83] gi|306900071|gb|EFN30691.1| methyltransferase small [Sinorhizobium meliloti BL225C] Length = 244 Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 63/212 (29%), Positives = 97/212 (45%), Gaps = 11/212 (5%) Query: 60 FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119 F V L L+ D PR ETELL +A A E+ ++D+ G+G + L + +E Sbjct: 22 FMGVDLELAPDVLVPREETELLGRNAAAIL---TERAGPATVIDMCCGSGNLALGIAEEV 78 Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS-----VEGLFDVIVSNPPY 174 P + G D++ + +A+ N + +R Q D F++ +EG D+IV NPPY Sbjct: 79 PLARVWGADLTDSTVALARRNVDRLSLGDRVVIRQGDLFAALAGEDLEGAVDMIVCNPPY 138 Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLS-HYRTIADGVSRHLNKDGLCSVEIGYNQKV 233 I + ++ + +PR + DGG G+S H R I + V+ L G E G Q Sbjct: 139 ISTSRLEGDSAHLLASEPREAFDGGPYGISIHQRLIREAVA-FLKPGGWLLFEFGEGQDR 197 Query: 234 DVVRIFESRKLFLVNAF-KDYGGNDRVLLFCR 264 + K + F +D G RV L R Sbjct: 198 QATALLARTKAYEAVTFAEDSAGKPRVALARR 229 >gi|319762955|ref|YP_004126892.1| protein-(glutamine-n5) methyltransferase, ribosomal protein l3-specific [Alicycliphilus denitrificans BC] gi|330825035|ref|YP_004388338.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Alicycliphilus denitrificans K601] gi|317117516|gb|ADV00005.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Alicycliphilus denitrificans BC] gi|329310407|gb|AEB84822.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Alicycliphilus denitrificans K601] Length = 307 Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 50/164 (30%), Positives = 83/164 (50%), Gaps = 5/164 (3%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LDL TG G++ + P + G D+S AL +A+ N +G+ ER +QSD ++ Sbjct: 137 VLDLCTGNGSLAVLAAMAWPEVRVTGADLSPDALAVARINVERHGLQERIRLVQSDGLAA 196 Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220 V G +D+I+ NPPY+ + + L E R +P ++L GG DG+ + + +D Sbjct: 197 VPGPWDLILCNPPYVNAQSMSELPAEYR-AEPELALAGGGDGMDFIHRLLREAPACMTED 255 Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 + +EIG N++ F +F + G D+VLL R Sbjct: 256 AVLVLEIG-NERAHFEAAFPQLPVFW---LQTSAGEDQVLLVTR 295 >gi|329941816|ref|ZP_08291081.1| methylase [Streptomyces griseoaurantiacus M045] gi|329299533|gb|EGG43433.1| methylase [Streptomyces griseoaurantiacus M045] Length = 254 Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 65/208 (31%), Positives = 94/208 (45%), Gaps = 8/208 (3%) Query: 38 LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97 +T + R + E + ++G +F+ + +T+ F PR TE LVD ALA + D Sbjct: 34 ITAMVDRRVAGEPLEIVVGRAEFHGLLITVEPGVFVPRRRTEFLVDQALALT------PD 87 Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN-AVTNGVSERFDTLQSD 156 ++DL G+GAV AL + DI A+ A+ N A G D L + Sbjct: 88 AGLVVDLCCGSGAVGAALAASPAAPRLHAADIDPVAVRCARRNLAPYEGHVHEGD-LYAA 146 Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216 ++ G DV+ +N PY+ S V L E R+ +P +LDGG DGL R +A G R Sbjct: 147 LPDALRGRIDVLTANVPYVPSDEVRLLPAEAREHEPPAALDGGTDGLDLLRRVAAGAPRW 206 Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRKL 244 L G VE Q + F L Sbjct: 207 LAPGGALLVETSERQAPAALAAFTGAGL 234 >gi|192359208|ref|YP_001982421.1| modification methylase, HemK family [Cellvibrio japonicus Ueda107] gi|190685373|gb|ACE83051.1| modification methylase, HemK family [Cellvibrio japonicus Ueda107] Length = 302 Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 51/130 (39%), Positives = 74/130 (56%), Gaps = 2/130 (1%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 RILDL TG+G + +A P + DIS AL +A+ N +G+ +R LQSD F Sbjct: 130 RILDLCTGSGCIGIACAYMFPEAEVQLSDISYDALAVAEQNIQMHGLEDRVFALQSDGFE 189 Query: 160 SVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 ++G +FD+IVSNPPY+++ + L E R +P + L G+DGL R + HL Sbjct: 190 HMQGQVFDLIVSNPPYVDAEDMAGLPDEYRA-EPELGLASGVDGLDFTRQLLTCALDHLT 248 Query: 219 KDGLCSVEIG 228 + GL VE+G Sbjct: 249 EAGLLVVEVG 258 >gi|120554489|ref|YP_958840.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Marinobacter aquaeolei VT8] gi|120324338|gb|ABM18653.1| [LSU ribosomal protein L3P]-glutamine N5-methyltransferase [Marinobacter aquaeolei VT8] Length = 301 Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 59/181 (32%), Positives = 89/181 (49%), Gaps = 10/181 (5%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110 I +LG F + + PR L+++ L P + V RILDL TG+G Sbjct: 85 IAYLLGEAWFMGMPFNVDERVLVPRSPIGELLENGLQ---PWLGATQVQRILDLCTGSGC 141 Query: 111 VCLALLKESPFFKGVGVD---ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDV 167 + + + F VD +S AL +A+SN +G+ R +QSD F ++EG +DV Sbjct: 142 IGIG---AATVFDEAEVDLSDVSADALAVAESNIELHGLEGRVRAIQSDVFDNIEGRYDV 198 Query: 168 IVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227 IVSNPPY+++ + + E +P + L G DGL I + +L DGL VE+ Sbjct: 199 IVSNPPYVDAEDLADMPAEYH-HEPELGLAAGDDGLDIAHRIVAQAADYLTDDGLLIVEV 257 Query: 228 G 228 G Sbjct: 258 G 258 >gi|257459362|ref|ZP_05624473.1| bifunctional methyltransferase [Campylobacter gracilis RM3268] gi|257443215|gb|EEV18347.1| bifunctional methyltransferase [Campylobacter gracilis RM3268] Length = 256 Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 63/201 (31%), Positives = 96/201 (47%), Gaps = 15/201 (7%) Query: 59 DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118 +F + + PR ETE+LV LA + E R I ++GTG+G + + L K Sbjct: 60 EFMGFKFYVDERVLIPRCETEILVKKTLALAQSLGEPR----ICEIGTGSGIIAICLKKL 115 Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYI-ES 177 P + DIS ALE+A++NA ++G F + + + G FD+IVSNPPYI S Sbjct: 116 LPSCRIAASDISADALEVARANAASSGADVEF--VHCAYADEIAGEFDLIVSNPPYIANS 173 Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237 +D L+ +P+ +L GG G + I +R + E+GY+QK + Sbjct: 174 YTLDARVLQ----EPKQALFGGERGDEILKRIVLIAARRAK---FLACEMGYDQK-QSLS 225 Query: 238 IFESRKLFLVNAFKDYGGNDR 258 F + F +KD DR Sbjct: 226 AFLREQGFRAEFYKDLAQFDR 246 >gi|21231984|ref|NP_637901.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66767889|ref|YP_242651.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Xanthomonas campestris pv. campestris str. 8004] gi|188991005|ref|YP_001903015.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Xanthomonas campestris pv. campestris str. B100] gi|21113717|gb|AAM41825.1| adenine-specific methylase [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66573221|gb|AAY48631.1| adenine-specific methylase [Xanthomonas campestris pv. campestris str. 8004] gi|167732765|emb|CAP50959.1| Putative HemK-family S-adenosyl-methionine-dependent methyltransferase [Xanthomonas campestris pv. campestris] Length = 308 Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 53/160 (33%), Positives = 85/160 (53%), Gaps = 6/160 (3%) Query: 74 PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133 PR L+++ P + R+V R LDL TG+G + +A+ +P + GVDIS A Sbjct: 109 PRSPIAELIEAGFE---PWLGGREVTRALDLCTGSGCIAIAMGHYNPHWDVDGVDISDDA 165 Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDP 192 L +A N ++ L+SD F+ + G +D+IV+NPPY+ + D L E ++P Sbjct: 166 LALAAENKARLH-ADNVSLLKSDLFTGLAGRQYDLIVTNPPYVTNDETDALPQEY-SYEP 223 Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232 + L G DGL I +HL++DGL E+G +++ Sbjct: 224 ELGLRAGDDGLDLVLKILRDAPQHLSEDGLLICEVGESEQ 263 >gi|109039399|ref|XP_001098011.1| PREDICTED: hemK methyltransferase family member 1 isoform 2 [Macaca mulatta] Length = 338 Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 70/233 (30%), Positives = 104/233 (44%), Gaps = 12/233 (5%) Query: 44 RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPR---IEKRDVVR 100 R L+ + ILG DF + L + F PRPETE LV+ L R + Sbjct: 103 RRLQRMPVQYILGEWDFQGLSLRMVPPVFIPRPETEELVEWVLEEVAQRSYAVGSPGSPL 162 Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD---- 156 IL++G G+GA+ L+LL + P + + VD A+ + NA + +R + D Sbjct: 163 ILEVGCGSGAISLSLLSQLPQSRVIAVDKGEAAISLTHENAQRLQLQDRIWIIHLDMTSE 222 Query: 157 --WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214 W G D+++SNPPYI ++ L E+R ++ +LDGG +G+ I Sbjct: 223 RSWTHLPWGPVDLVISNPPYIFHQDMEQLAPEIRSYEDPAALDGGEEGMDIITHILALAP 282 Query: 215 RHLNKDGLCSVEIGYNQKVDVVRIFESRK---LFLVNAFKDYGGNDRVLLFCR 264 R L G +E+ V +SR L LV KD+ G R L R Sbjct: 283 RLLKDSGSIFLEVDPRHPELVSSWLQSRPELYLNLVAVRKDFCGRSRFLHIQR 335 >gi|268590455|ref|ZP_06124676.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Providencia rettgeri DSM 1131] gi|291314135|gb|EFE54588.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Providencia rettgeri DSM 1131] Length = 310 Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 55/165 (33%), Positives = 87/165 (52%), Gaps = 6/165 (3%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 ILDL TG+G + +A E P + VDIS L +A+ N +G+ R ++SD F Sbjct: 136 ILDLCTGSGCIAIACAYEFPDAEVDAVDISSDVLAVAEQNIANHGLEHRVIPIRSDLFRD 195 Query: 161 V-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 + E +D+IV+NPPY+++ +D L E R +P ++L G DGL R I R L + Sbjct: 196 MPEVKYDLIVTNPPYVDAEDMDDLPEEFR-VEPELALAAGSDGLKLVRRILANAPRFLTE 254 Query: 220 DGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 +G+ E+G N V ++ + ++ +YGG D V + R Sbjct: 255 EGVLVCEVG-NSMVHLIEQYPEIPFIWLDF--EYGG-DGVFMLTR 295 >gi|294155814|ref|YP_003560198.1| bifunctional methyltransferase [Mycoplasma crocodyli MP145] gi|291600378|gb|ADE19874.1| bifunctional methyltransferase [Mycoplasma crocodyli MP145] Length = 241 Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 52/182 (28%), Positives = 94/182 (51%), Gaps = 10/182 (5%) Query: 47 KHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGT 106 K + +I+G+ ++ NV++ + + PR ETE L+ AL ++ ++LDL Sbjct: 30 KQVPVQKIIGYIEYANVKINIQKNVLIPRYETEELIFLALK------NIKNDSKVLDLCC 83 Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFD 166 G+G + +AL + + DI A+E +K N + N V + ++SD F +++ FD Sbjct: 84 GSGFIGIALKFNNKNLQVTLSDIDDNAIEQSKINTLENNV--KVKIIKSDLFENIDEKFD 141 Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE 226 I+SNPPY+ + + + V + +P +L +GL Y+ I ++LNK+G E Sbjct: 142 CIISNPPYL--MKSENISNNVLNHEPHHALFADDNGLFFYKEIMKQSKKYLNKNGKLIFE 199 Query: 227 IG 228 I Sbjct: 200 IN 201 >gi|255321586|ref|ZP_05362744.1| bifunctional methyltransferase [Campylobacter showae RM3277] gi|255301442|gb|EET80701.1| bifunctional methyltransferase [Campylobacter showae RM3277] Length = 277 Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 71/264 (26%), Positives = 113/264 (42%), Gaps = 30/264 (11%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 R + L +S + ++ D+ F L + R +E + I G FY + Sbjct: 23 RVAKILLMNYLDVSIEWIFLNQKKEFDESGYFAL---VKRYENYEPLEYITGEAGFYGLT 79 Query: 65 LTLSSDTFEPRPETELLVDSALAF--SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + PRPETE+LV+ +L +LP + +V + G+G ++CLAL + Sbjct: 80 FNVKKGVLIPRPETEILVEKSLEILSNLPARNEPPLVAEIGTGSGIISICLALNSNA--- 136 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182 K + DIS AL +A+ NA GV R ++ + + G FD++VSNPPYI Sbjct: 137 KIIASDISDDALNLARENAAKFGVEGRIKFVKCAYLDQIYGRFDLLVSNPPYI------- 189 Query: 183 LGLEVRDF--------DPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234 RD+ +P +L GG G + I K C E+GY+Q+ Sbjct: 190 ----ARDYELDKFVLNEPHEALFGGAAGDEILKNIVLVAKNRGVKYLAC--EMGYDQRES 243 Query: 235 VVRIFESRKLFLVNAFKDYGGNDR 258 + + F ++D G DR Sbjct: 244 MQNALKFNG-FEAEFYRDLAGFDR 266 >gi|126667394|ref|ZP_01738366.1| N5-glutamine methyltransferase [Marinobacter sp. ELB17] gi|126628150|gb|EAZ98775.1| N5-glutamine methyltransferase [Marinobacter sp. ELB17] Length = 300 Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 66/207 (31%), Positives = 100/207 (48%), Gaps = 13/207 (6%) Query: 27 DSVLDDRQRFFLTNAIVRSLKHE-SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85 D+ L +R + I R ++ + + +LG F + + PR L+++ Sbjct: 60 DARLVREERELILERIERRVEEQVPLAYLLGEAWFMGLPFNVDPRVLVPRSPLAELLENG 119 Query: 86 LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD---ISCKALEIAKSNAV 142 L P + V RILDL TG+G + +A + F G VD IS AL +A SN Sbjct: 120 LQ---PWLGDVYVERILDLCTGSGCIGIA---AATVFDGAEVDLADISTDALAVADSNIA 173 Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVR-DFDPRISLDGGID 201 + + ER T+QSD FS++ +DVI+SNPPY+ + D G+ +P + L G D Sbjct: 174 MHQLGERVRTVQSDVFSNLNERYDVILSNPPYVNA--RDLAGMPAEFGHEPVLGLAAGED 231 Query: 202 GLSHYRTIADGVSRHLNKDGLCSVEIG 228 GL I G + L +GL VE+G Sbjct: 232 GLEIAHRILAGAAERLTDNGLLIVEVG 258 >gi|126336076|ref|XP_001378754.1| PREDICTED: similar to HemK methyltransferase family member 1 [Monodelphis domestica] Length = 358 Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 71/252 (28%), Positives = 113/252 (44%), Gaps = 22/252 (8%) Query: 30 LDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFS 89 + D Q+ + R L+ + ++G DF + L ++ F PRPETE LV+ L Sbjct: 92 ITDLQQEQIGELCTRRLQRMPVQYVIGEWDFQGLTLKMTPPVFIPRPETEELVNLVLHEQ 151 Query: 90 LPRIE----KRDVVR-------ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAK 138 R + KR + ILD+ G+GA+ L+LL + + V VD +A+++ + Sbjct: 152 SQRCQEFRRKRTLAHQSHSWPLILDVCCGSGAIALSLLSKLTQSRVVAVDKGEEAVQLTR 211 Query: 139 SNAVTNGVSERFDTLQSDWFSSVE-------GLFDVIVSNPPYIESVIVDCLGLEVRDFD 191 NA + +R ++ D +SV G D +VSNPPYI + L E+ ++ Sbjct: 212 ENAQRLHLEDRIQIVRHD-ITSVNREQLLPWGPVDFVVSNPPYIFHCDMAQLAPEILSYE 270 Query: 192 PRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK---LFLVN 248 SLDGG +G+S R I L G +E+ V + +S L L+ Sbjct: 271 DTDSLDGGENGMSVIREILSQAPMLLKDSGSIFLEVDPRHPELVEKWLQSHPDLGLSLLA 330 Query: 249 AFKDYGGNDRVL 260 D+ G R L Sbjct: 331 THVDFCGKPRFL 342 >gi|294625088|ref|ZP_06703734.1| adenine-specific methylase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|294666799|ref|ZP_06732033.1| adenine-specific methylase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292600597|gb|EFF44688.1| adenine-specific methylase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292603460|gb|EFF46877.1| adenine-specific methylase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 308 Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 58/176 (32%), Positives = 91/176 (51%), Gaps = 7/176 (3%) Query: 74 PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133 PR L+++ P + R+V R LDL TG+G + +A+ +P + GVDIS A Sbjct: 109 PRSPIAELIEAGFE---PWLGGREVTRALDLCTGSGCIAIAMGHYNPQWDVDGVDISDDA 165 Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDP 192 L +A N ++ L+SD FS + G +D+IV+NPPY+ + D L E ++P Sbjct: 166 LALAAENKARLH-ADNVTLLKSDLFSGLGGRQYDLIVTNPPYVTNEETDALPQEY-SYEP 223 Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN 248 + L G DGL I +HL++DGL E+G +++ +VR+ L V Sbjct: 224 ELGLRAGDDGLDLVLKILRDAPQHLSEDGLLICEVGESEQ-HLVRLLPEVDLAWVE 278 >gi|330981968|gb|EGH80071.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 189 Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 52/142 (36%), Positives = 81/142 (57%), Gaps = 3/142 (2%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 RILDL TG+G + +A + P + D+S ALE+A N +G+ +R T+Q D F Sbjct: 14 ARILDLCTGSGCIGIACAEVFPDAEVALADLSYDALEVANQNIERHGMEDRVYTVQGDGF 73 Query: 159 SSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217 + G FD+IVSNPPY+++ + E + +P ++L G DGL+ R + + HL Sbjct: 74 DGLPGQRFDLIVSNPPYVDAEDFADMPDEYQ-HEPELALACGSDGLNLVRRMLAQAADHL 132 Query: 218 NKDGLCSVEIGYNQKVDVVRIF 239 N+ GL VE+G N +V V ++ Sbjct: 133 NEKGLLIVEVG-NSQVHVQALY 153 >gi|269957242|ref|YP_003327031.1| modification methylase, HemK family [Xylanimonas cellulosilytica DSM 15894] gi|269305923|gb|ACZ31473.1| modification methylase, HemK family [Xylanimonas cellulosilytica DSM 15894] Length = 282 Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 66/228 (28%), Positives = 109/228 (47%), Gaps = 14/228 (6%) Query: 44 RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103 R + E + + G F +V L + F PRPETE + A+ + +++R ++D Sbjct: 55 RRARREPLQHLTGVAPFRHVELAVGPGVFVPRPETEQVAQVAIDEARRVVDERGSAVVVD 114 Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS--- 160 L TG+GA+ LA+ E P + V++ A A N +GV+ ++ D ++ Sbjct: 115 LCTGSGAIALAVATEVPGARVHAVELDAAAHAWAARNLAGSGVT----LVKGDARTTLRE 170 Query: 161 VEGLFDVIVSNPPYI--ESVIVDCLGLEVRDFDPRISLDG-GIDGLSHYRTIADGVSRHL 217 ++G DV+VSNPPY+ ++V D EV + DP ++L G G DGL R I +R L Sbjct: 171 LDGAVDVVVSNPPYVPPDAVPRDP---EVAEHDPAVALYGLGADGLEVPRGITAAAARLL 227 Query: 218 NKDGLCSVEIGYNQKVDVVRIFESRKLFL-VNAFKDYGGNDRVLLFCR 264 GL +E Q + ++ L+ D G R+++ R Sbjct: 228 RPGGLYVMEHAEVQDAAARAMVDATGLYAPATTADDLTGRPRMVVARR 275 >gi|297585439|ref|YP_003701219.1| protein-(glutamine-N5) methyltransferase [Bacillus selenitireducens MLS10] gi|297143896|gb|ADI00654.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacillus selenitireducens MLS10] Length = 307 Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 69/229 (30%), Positives = 114/229 (49%), Gaps = 22/229 (9%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA---LAFSLPR---IEKRDVVRILDL 104 + + G FY R ++ D PRPETE LV++ L+ L + ++ + I+D+ Sbjct: 76 VQHLTGEEVFYGRRFRVNRDVLIPRPETEELVEAVKERLSTGLSTSWDADSQEELGIVDI 135 Query: 105 GTGTGAVCLALLKESP-FFKG------VGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 GTG+G + + L E P + KG + DIS ALE+A+ NA + F L + Sbjct: 136 GTGSGILAITLALEIPGWLKGNQATRVIATDISRAALEMARINAEAHEAPVTF--LAGSY 193 Query: 158 FSSV--EGLFD-VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214 + G+ +IVSNPPYI + V++ +P +L +GL+ YRT+ + + Sbjct: 194 LDPIIESGIRPRLIVSNPPYIPESDQAMMKDNVKNHEPHTALFAEENGLAAYRTMIEDLH 253 Query: 215 RHLNKDG-LCSVEIGYNQKVDVVRIFESRKLFLVNA--FKDYGGNDRVL 260 R L+ +G EIG+NQ D VR + + + +D GN+R++ Sbjct: 254 RVLHPEGTWLFFEIGWNQG-DAVRTMITDRFPESSPEVIRDINGNERIV 301 >gi|127513345|ref|YP_001094542.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Shewanella loihica PV-4] gi|126638640|gb|ABO24283.1| modification methylase, HemK family [Shewanella loihica PV-4] Length = 314 Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 58/176 (32%), Positives = 93/176 (52%), Gaps = 7/176 (3%) Query: 91 PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150 P + + V RILDL TG+ + +A E + +DIS ALE+A+ N + GV +R Sbjct: 127 PWLYNKPVNRILDLCTGSACIAIACAYEFEDAEVDAIDISSDALEVAQINIESLGVMDRV 186 Query: 151 DTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208 ++SD F+++ +D+IVSNPPY+++ + + E +P + L G DGL + Sbjct: 187 FPIESDMFAAIPKGPQYDLIVSNPPYVDAEDIGDMPEEYH-HEPELGLASGRDGLDLTKR 245 Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 I + +L +DGL VE+G N V ++ F VN ++GG D V + R Sbjct: 246 ILANAADYLTQDGLLVVEVG-NSMVHLMEQFPEVPFTWVNF--EHGG-DGVFVLTR 297 >gi|330954447|gb|EGH54707.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Pseudomonas syringae Cit 7] Length = 302 Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 50/134 (37%), Positives = 76/134 (56%), Gaps = 2/134 (1%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 RILDL TG+G + +A P + D+S ALE+A N +G+ +R T+Q D F Sbjct: 127 ARILDLCTGSGCIGIACADVFPEAEVALADLSYDALEVANQNIERHGMEDRVYTVQGDGF 186 Query: 159 SSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217 + G FD+IVSNPPY+++ + E + +P ++L G DGL+ R + + HL Sbjct: 187 DGLPGQRFDLIVSNPPYVDAEDFADMPDEYQ-HEPELALACGSDGLNLVRRMLAQAADHL 245 Query: 218 NKDGLCSVEIGYNQ 231 N+ GL VE+G +Q Sbjct: 246 NEKGLLIVEVGNSQ 259 >gi|227820142|ref|YP_002824113.1| methyl transferase [Sinorhizobium fredii NGR234] gi|227339141|gb|ACP23360.1| probable methyl transferase [Sinorhizobium fredii NGR234] Length = 275 Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 64/225 (28%), Positives = 106/225 (47%), Gaps = 16/225 (7%) Query: 45 SLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR-DVVRILD 103 SL + + R++ F ++ + L+ D PR ETELL +A+ R+ R V ++D Sbjct: 47 SLANSPLPRLV---RFMDIEIELAPDVLVPREETELLGRNAVQ----RLRDRTGPVMVID 99 Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG 163 + G+G + L + P + +G D++ + +A+ N + +R Q D F+++EG Sbjct: 100 MCCGSGNLALGIAAALPLAQVLGADLTDSTVALARRNVGLLSLQQRVSIRQGDLFAALEG 159 Query: 164 -----LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS-HYRTIADGVSRHL 217 D+IV NPPYI + ++ + D +PR + DGG G+S H R I D V+ L Sbjct: 160 DGLEGEIDMIVCNPPYISTSRLEGDSAHLLDSEPREAFDGGPYGISIHQRLIRDAVA-FL 218 Query: 218 NKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK-DYGGNDRVLL 261 G E G Q + K + +F D G RV + Sbjct: 219 KPGGWLLFEFGEGQDRQAAALLSRAKAYEPVSFAHDAQGKPRVAI 263 >gi|26988557|ref|NP_743982.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Pseudomonas putida KT2440] gi|24983329|gb|AAN67446.1|AE016372_1 modification methylase, HemK family [Pseudomonas putida KT2440] Length = 302 Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 62/207 (29%), Positives = 99/207 (47%), Gaps = 7/207 (3%) Query: 27 DSVLDDRQRFFLTNAIVRSLKHE-SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85 D +L+D +R L + + R ++ +LG F + + PR L++ Sbjct: 58 DCMLEDDERVRLQHLLKRRIEERVPAAYLLGEAWFCGMSFIVDERVLVPRSPIGELIEKR 117 Query: 86 LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145 L + RILDL TG+G + + P + V D+S +ALE+A N +G Sbjct: 118 FEPWL----ASEPARILDLCTGSGCIGIVAADVFPEAEVVLADLSFQALEVANQNIERHG 173 Query: 146 VSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204 + R T+Q D F + G FD+I+SNPPY+++ D + E +P + L G DGL Sbjct: 174 LDGRVYTVQGDGFGGLPGQRFDLILSNPPYVDAEDFDDMPAEYH-HEPELGLACGSDGLD 232 Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQ 231 R + + HL + GL VE+G +Q Sbjct: 233 LVRRMLAEAADHLTEKGLLIVEVGNSQ 259 >gi|121607280|ref|YP_995087.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Verminephrobacter eiseniae EF01-2] gi|121551920|gb|ABM56069.1| modification methylase, HemK family [Verminephrobacter eiseniae EF01-2] Length = 318 Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 50/165 (30%), Positives = 85/165 (51%), Gaps = 5/165 (3%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LDL TG G++ + P + G DIS +AL +A+ N +G+ +R SD S Sbjct: 150 QVLDLCTGNGSLAVLAALAWPEVQVTGADISPEALAVARINVERHGLQQRIALQLSDGLS 209 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 ++ G +D+I+ NPPY+ + + L E R +PR++L GG DG+ R + + ++ Sbjct: 210 ALPGPWDLILCNPPYVNAASMAALPAEYRA-EPRLALAGGADGMDFIRPLLRTAAACMSD 268 Query: 220 DGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 + + +EIG N++ F V+ G D+VLL R Sbjct: 269 NAVLVLEIG-NERPGFEAAFAQHP---VHWLATSAGPDQVLLLTR 309 >gi|77457946|ref|YP_347451.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Pseudomonas fluorescens Pf0-1] gi|77381949|gb|ABA73462.1| [LSU ribosomal protein L3P]-glutamine N5-methyltransferase [Pseudomonas fluorescens Pf0-1] Length = 302 Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 66/207 (31%), Positives = 102/207 (49%), Gaps = 7/207 (3%) Query: 27 DSVLDDRQRFFLTNAIVRSLKHE-SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85 D L+D + L + R ++ +LG F + + PR L+++ Sbjct: 58 DCALEDDELVNLQRLLKRRIEERIPTAYLLGEAWFCGMSFIVDERVLIPRSPIGELIENR 117 Query: 86 LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145 A P I + RILDL TG+G + +A E + V D+S +ALE+A N +G Sbjct: 118 FA---PWI-GDEPARILDLCTGSGCIGIACAYEFQNAEVVLADLSFEALEVANQNIERHG 173 Query: 146 VSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204 V ER T+Q D F + G FD+IVSNPPY+++ + E + +P + L G DGL+ Sbjct: 174 VDERVFTVQGDGFDGLPGQRFDLIVSNPPYVDAEDFADMPDEYQ-HEPELGLACGDDGLN 232 Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQ 231 R + + HL + GL VE+G +Q Sbjct: 233 LVRRMLAEAADHLTEKGLLIVEVGNSQ 259 >gi|288941148|ref|YP_003443388.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Allochromatium vinosum DSM 180] gi|288896520|gb|ADC62356.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Allochromatium vinosum DSM 180] Length = 310 Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 59/176 (33%), Positives = 88/176 (50%), Gaps = 5/176 (2%) Query: 54 ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113 ++G F + + PR LV+ P I+ V R+LDL TG+G + + Sbjct: 91 LIGRAWFAGLEFRVDEQVLVPRSPIAELVEVGFD---PWIDADRVGRVLDLCTGSGCIGI 147 Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNP 172 A P VDIS +AL IA+ N +GV +R +SD F+++ + +DVIVSNP Sbjct: 148 AAAVYLPDADVDLVDISPEALVIARDNVERHGVGDRVHIFESDLFAALGDQRYDVIVSNP 207 Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228 PY+ + L E + +P + L G DGL I D + HLN+ G+ VE+G Sbjct: 208 PYVSRAEFEALPTEYHN-EPHLGLLAGEDGLDIVLRILDEAADHLNERGILVVEVG 262 >gi|261346200|ref|ZP_05973844.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Providencia rustigianii DSM 4541] gi|282565856|gb|EFB71391.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Providencia rustigianii DSM 4541] Length = 310 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 54/165 (32%), Positives = 87/165 (52%), Gaps = 6/165 (3%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 ILDL TG+G + +A E P + VDIS L +A+ N +G+ R ++SD F Sbjct: 136 ILDLCTGSGCIAIACAHEFPEAEVDAVDISADVLAVAEQNIANHGLEHRVIPIRSDLFRD 195 Query: 161 V-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 + E +D+IV+NPPY+++ +D L E R +P ++L G DGL R I R L + Sbjct: 196 MPEVKYDLIVTNPPYVDAEDMDDLPEEFR-VEPELALAAGSDGLKLVRRILANAPRFLTE 254 Query: 220 DGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 +G+ E+G N V ++ + ++ ++GG D V + R Sbjct: 255 EGILVCEVG-NSMVHLIEQYPDIPFIWLDF--EFGG-DGVFMLTR 295 >gi|92114585|ref|YP_574513.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Chromohalobacter salexigens DSM 3043] gi|91797675|gb|ABE59814.1| [LSU ribosomal protein L3P]-glutamine N5-methyltransferase [Chromohalobacter salexigens DSM 3043] Length = 317 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 57/161 (35%), Positives = 85/161 (52%), Gaps = 7/161 (4%) Query: 74 PR-PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCK 132 PR P EL+ D A+ ++ R+LDL G+G + +A P + VDIS Sbjct: 123 PRSPIAELIEDGFAAW----FDQWPPARVLDLCAGSGCIGIATALYLPTAEVDLVDISPD 178 Query: 133 ALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFD 191 AL +AK+N V + V R + SD F+ V G +DVIVSNPPY+++ + + E R + Sbjct: 179 ALAVAKANIVRHDVGHRVRAVTSDLFAGVAGQRYDVIVSNPPYVDARDLAGMPAEFR-HE 237 Query: 192 PRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232 P ++L G DGL R + HL DG+ VE+G + + Sbjct: 238 PTLALAAGDDGLDIVRRMLREAREHLTDDGVLIVEVGNSAR 278 >gi|239994985|ref|ZP_04715509.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Alteromonas macleodii ATCC 27126] Length = 324 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 53/140 (37%), Positives = 76/140 (54%), Gaps = 3/140 (2%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 ILD+ TG + +AL P + VDIS ALE+A N +G+S R +QSD FSS Sbjct: 154 ILDMCTGGACIAIALAHAYPEAQVDAVDISTDALEVADINIQEHGLSHRVYPIQSDLFSS 213 Query: 161 VEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 +EG +D+IVSNPPY+++ + L E +P ++L G DGL + +LN Sbjct: 214 LEGQKYDLIVSNPPYVDAEDMADLPEEYH-HEPELALAAGEDGLELVDIMLKEAPTYLND 272 Query: 220 DGLCSVEIGYNQKVDVVRIF 239 G VE+G N +V + F Sbjct: 273 GGWLFVEVG-NSEVHMSERF 291 >gi|62185242|ref|YP_220027.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Chlamydophila abortus S26/3] gi|62148309|emb|CAH64076.1| conserved hypothetical protein [Chlamydophila abortus S26/3] Length = 283 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 65/211 (30%), Positives = 97/211 (45%), Gaps = 10/211 (4%) Query: 54 ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAF--SLPRIEKRDVVRILDLGTGTGAV 111 I G F + L + S PR ETELL + + + P I+ D+ G+G + Sbjct: 71 IHGSVRFLQLDLEVDSRVLIPRMETELLAEKIIQYLTQHPHIQT-----FYDVCCGSGCL 125 Query: 112 CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSN 171 L++ K P + + DI KA+ +AK NA N + + D L+ D F+ D V N Sbjct: 126 GLSIKKYCPNVQVILSDICPKAVAVAKINASKNHL--QVDVLEGDLFAPFSCPADAFVCN 183 Query: 172 PPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231 PPY+ + EVR +P +L GG GL Y IA + L G+ +EIGY+Q Sbjct: 184 PPYLSFDEIMQTDPEVRCHEPWKALVGGSSGLEFYERIARDLDTILCPGGVGWLEIGYSQ 243 Query: 232 KVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262 V RIF + + + +D DR+ Sbjct: 244 GERVKRIFANHGVH-GSIHQDLSACDRIFFL 273 >gi|269792433|ref|YP_003317337.1| modification methylase, HemK family [Thermanaerovibrio acidaminovorans DSM 6589] gi|269100068|gb|ACZ19055.1| modification methylase, HemK family [Thermanaerovibrio acidaminovorans DSM 6589] Length = 284 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 65/220 (29%), Positives = 96/220 (43%), Gaps = 9/220 (4%) Query: 43 VRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRIL 102 R K E + +LG DF + PRPETE+L A PR R L Sbjct: 60 ARRAKGEPLAYVLGTMDFLQWNFLVGPGCLIPRPETEVLASLAAETLGPR------GRFL 113 Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ---SDWFS 159 D GTG+G + +L +GV +D S AL+ A N +S R + + + S Sbjct: 114 DWGTGSGCIACSLAMMVDGSQGVAMDASPGALKWAWRNVQRYRLSNRVLLVHGSSAHFIS 173 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 FD++V+NPPYI S + L V F+P ++L+GG G+ G R L Sbjct: 174 QDLTPFDLVVANPPYIPSEHMGELDGSVSRFEPHLALNGGDGGIQVPVEWLRGAVRLLRA 233 Query: 220 DGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRV 259 G +E + ++ ++ E L V + +D G RV Sbjct: 234 GGQVLMETAGDWQLSILEALEIEGLSFVGSHQDQFGVRRV 273 >gi|167624580|ref|YP_001674874.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Shewanella halifaxensis HAW-EB4] gi|167354602|gb|ABZ77215.1| modification methylase, HemK family [Shewanella halifaxensis HAW-EB4] Length = 314 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 67/194 (34%), Positives = 101/194 (52%), Gaps = 12/194 (6%) Query: 74 PR-PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCK 132 PR P EL+ + FS P + + V R+LDL TG+G + +A E + +DIS Sbjct: 113 PRSPIAELIANR---FS-PWLYNKPVNRVLDLCTGSGCIAIACAYEFEDAEVDALDISVD 168 Query: 133 ALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCLGLEVRDF 190 ALE+A+ N T V +R ++SD FS++ +D+IVSNPPY+++ + + E Sbjct: 169 ALEVAQINIETLEVMDRVFPMESDLFSAIPKGPHYDLIVSNPPYVDAEDIGDMPDEYH-H 227 Query: 191 DPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAF 250 +P I L G DGL + I + +L +DGL VE+G N V + F VN F Sbjct: 228 EPEIGLASGRDGLDLTKRILANAADYLTEDGLLVVEVG-NSMVHLSEQFPDVPFTWVN-F 285 Query: 251 KDYGGNDRVLLFCR 264 ++ G D V + R Sbjct: 286 EN--GGDGVFILTR 297 >gi|152985719|ref|YP_001348948.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Pseudomonas aeruginosa PA7] gi|150960877|gb|ABR82902.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Pseudomonas aeruginosa PA7] Length = 304 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 65/215 (30%), Positives = 103/215 (47%), Gaps = 8/215 (3%) Query: 27 DSVLDDRQRFFLTNAIVRSLKHE-SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85 D L+D +R L + R ++ +LG F + ++ PR L++ Sbjct: 58 DCRLEDDERLELAEVLRRRIEERIPAAYLLGEAWFCGLPFSVDERVLVPRSPIAELIEQR 117 Query: 86 LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145 + LP + RILDL TG+G + +A + V D+S ALE+A N + Sbjct: 118 FSPWLPA----EPARILDLCTGSGCIGIACAYAFEQAEVVLADLSFDALEVANMNIERHD 173 Query: 146 VSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204 + ER T+Q D F+ + G FD+IVSNPPY+++ + E +P + L G DGL Sbjct: 174 LGERVYTVQGDGFAGLPGQRFDLIVSNPPYVDAEDFADMPAEFH-HEPELGLACGDDGLD 232 Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 R + + HL + GL VE+G N +V V ++ Sbjct: 233 LVRRMLAEAADHLGEKGLLIVEVG-NSEVHVQSLY 266 >gi|58582885|ref|YP_201901.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Xanthomonas oryzae pv. oryzae KACC10331] gi|84624747|ref|YP_452119.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188577725|ref|YP_001914654.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Xanthomonas oryzae pv. oryzae PXO99A] gi|58427479|gb|AAW76516.1| adenine-specific methylase [Xanthomonas oryzae pv. oryzae KACC10331] gi|84368687|dbj|BAE69845.1| adenine-specific methylase [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188522177|gb|ACD60122.1| modification methylase, HemK family [Xanthomonas oryzae pv. oryzae PXO99A] Length = 308 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 53/160 (33%), Positives = 86/160 (53%), Gaps = 6/160 (3%) Query: 74 PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133 PR L+++ P + R+V R LDL TG+G + +A+ ++P + GVDIS A Sbjct: 109 PRSPIAELIEAGFE---PWLGGREVTRALDLCTGSGCIAIAMGHDNPQWDVDGVDISDDA 165 Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDP 192 L +A N ++ L+SD F+ + G +D+IV+NPPY+ + D L E ++P Sbjct: 166 LALAAENKARLH-ADNVTLLKSDLFTGLGGRQYDLIVTNPPYVTNDETDALPQEY-SYEP 223 Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232 + L G DGL I +HL++DGL E+G +++ Sbjct: 224 ELGLRAGDDGLDLVLKILRDAPQHLSEDGLLICEVGESEQ 263 >gi|321253120|ref|XP_003192636.1| S-adenosylmethionine-dependent methyltransferase [Cryptococcus gattii WM276] gi|317459105|gb|ADV20849.1| S-adenosylmethionine-dependent methyltransferase, putative [Cryptococcus gattii WM276] Length = 343 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 70/247 (28%), Positives = 111/247 (44%), Gaps = 28/247 (11%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELL---VDSALAFSLPRIEKR-- 96 + R E + ILG DF + + PRPET + + S + S+P + Sbjct: 93 VKRRSAGEPLQYILGSADFGPLNIRCQKPVLIPRPETAHIFTRLSSTILSSVPSLTSASR 152 Query: 97 --DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154 + + ILDL TGT + L L +P VG+D S A+ + +N G+ ER + Sbjct: 153 PLEPLPILDLCTGTACISLLLAHLNPLSTAVGIDNSPAAVSLGGANVKARGMEERVEVRY 212 Query: 155 SDWFSSV------EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL--DGGID--GLS 204 + F+ EG ++VSNPPYI + L V+D++ +L DG D GL+ Sbjct: 213 GNVFAEPARLLGREGKVGLVVSNPPYIPLKEWEQLPKSVKDWESPTALLGDGKKDGEGLA 272 Query: 205 HYRTIADGVS------RHLNKDGL-----CSVEIGYNQKVDVVRIFESRKLFLVNAFKDY 253 Y IA+ + + K G +VE+G Q V IF+S ++ ++D Sbjct: 273 FYERIAEMLPDLLLDEGEMEKKGWKGVPRVAVEVGLGQARKVEEIFKSEQIKKTEIWQDQ 332 Query: 254 GGNDRVL 260 G DR++ Sbjct: 333 FGLDRMV 339 >gi|256393897|ref|YP_003115461.1| modification methylase, HemK family [Catenulispora acidiphila DSM 44928] gi|256360123|gb|ACU73620.1| modification methylase, HemK family [Catenulispora acidiphila DSM 44928] Length = 257 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 56/206 (27%), Positives = 90/206 (43%), Gaps = 15/206 (7%) Query: 38 LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97 L + R E + ++GW +F +R+ + F PR +E LV+ AL R+ Sbjct: 38 LEALVARRCAGEPLEHVVGWAEFCGLRIGVGPGVFVPRRRSEFLVELALDLG------RE 91 Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 ++DL G+ L + DI L A+ N + R T + D Sbjct: 92 ARVVVDLCCGSAPFATVLAARLSGAEVHAADIDPAQLAYAREN-----LGRRGSTHEGDL 146 Query: 158 FSSV----EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213 + ++ G D++V N PY+ + + L E R F+P SLDGG DGL+ +R +ADG Sbjct: 147 YEALPERLRGKVDLLVVNAPYVPTDALSTLPAEARVFEPAASLDGGADGLAVHRRVADGA 206 Query: 214 SRHLNKDGLCSVEIGYNQKVDVVRIF 239 + L G +E Q ++ F Sbjct: 207 PQWLAPRGHLLIETSEAQAEAMLEAF 232 >gi|290982847|ref|XP_002674141.1| predicted protein [Naegleria gruberi] gi|284087729|gb|EFC41397.1| predicted protein [Naegleria gruberi] Length = 250 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 73/249 (29%), Positives = 120/249 (48%), Gaps = 42/249 (16%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV----------R 100 + I+G DF+ + S PR ++E+L+++ L +P I KR+ V R Sbjct: 1 MEYIVGNVDFFGRNFNVDSRVLIPRVDSEVLIETTLNQIVPLILKRNGVTNLSQLDRPLR 60 Query: 101 ILDLGTGTGAVC---------LALLKESPFFKGVGVDISCKALEIAKSNA---------V 142 I+++G G+G + + L K F G+D S AL++A NA + Sbjct: 61 IMEIGVGSGCLLITLLLELEKIGLQKVRAF----GIDKSEGALKVATLNAQNLIPKYMEL 116 Query: 143 TNGVSERFDTLQSDWFSSVEGL-----FDVIVSNPPYIES-VIVDCLGLEVRDFDPRISL 196 + + +Q D F + + D+I+SNPPYI + V+ + L +V +P ++L Sbjct: 117 AGKDLKELEFIQHDIFKDDDWIHKDLEMDLIISNPPYIPTNVVQNELDKDVSTHEPHMAL 176 Query: 197 DGGIDGLSHYR-TIADGV-SRHLNKDGLCSVEIGYNQKVDV-VRIFESR-KLFLVNAFKD 252 DGG+DG Y + D V S N +G C +E+GY+Q + RI SR L + KD Sbjct: 177 DGGLDGFDFYNYLLVDNVLSSKYNLNGHCVMEVGYDQANSLRERIINSRSSLQFLGTAKD 236 Query: 253 YGGNDRVLL 261 G +RV++ Sbjct: 237 LSGYERVVM 245 >gi|332525856|ref|ZP_08401997.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Rubrivivax benzoatilyticus JA2] gi|332109407|gb|EGJ10330.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Rubrivivax benzoatilyticus JA2] Length = 289 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 47/163 (28%), Positives = 82/163 (50%), Gaps = 5/163 (3%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+LDL TG G++ + P + D+S AL +A N +G+ R Q D + Sbjct: 123 RVLDLCTGNGSLAVLAAMAWPEVEVDASDLSADALAVAAINVARHGLQSRIRLRQGDGLA 182 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 + +G++D+++ NPPY+ + + L E R +P ++L GG DG+ R + + RHL+ Sbjct: 183 AADGVYDLVLCNPPYVNAEAMAALPAEYR-AEPELALAGGADGMDFVRLLLAELPRHLSP 241 Query: 220 DGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262 G+ +EIG+ + ++L + G D+VLL Sbjct: 242 HGVLVLEIGHERAHFEAAFPRLEAVWL----ETSAGEDQVLLL 280 >gi|167769700|ref|ZP_02441753.1| hypothetical protein ANACOL_01034 [Anaerotruncus colihominis DSM 17241] gi|167668061|gb|EDS12191.1| hypothetical protein ANACOL_01034 [Anaerotruncus colihominis DSM 17241] Length = 280 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 64/235 (27%), Positives = 100/235 (42%), Gaps = 8/235 (3%) Query: 32 DRQRFFLTNAIVRSLKH-ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSL 90 D + NA+ K E + +LG +FY + + PRP+TE LV++AL Sbjct: 49 DSAKLAAFNALAARYKAGEPLQYLLGMWEFYGLPFEVGPGVLIPRPDTETLVETALRL-- 106 Query: 91 PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150 ++ + DL G+G + A+ P V++S A N N Sbjct: 107 --LKGTAAPAVADLCAGSGCIAAAIAHARPDAHVYAVELSDAAFPYLVRNLARNAPGNA- 163 Query: 151 DTLQSDWFS-SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209 + + D F+ D+IVSNPPYI ++ L +VR ++P ++L GG DGL YR + Sbjct: 164 EAICGDAFAPPPLPPLDLIVSNPPYIARAEMETLSPQVR-WEPEMALLGGEDGLDFYRAL 222 Query: 210 ADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 L G + E+GY Q V + + +D G RV+ R Sbjct: 223 PRIWMPLLRPGGYIAFEVGYTQADTVAGLLGRSGYQSCSVERDLAGIRRVVWAQR 277 >gi|291278534|ref|YP_003495369.1| modification methylase HemK family [Deferribacter desulfuricans SSM1] gi|290753236|dbj|BAI79613.1| modification methylase, HemK family [Deferribacter desulfuricans SSM1] Length = 278 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 76/267 (28%), Positives = 136/267 (50%), Gaps = 34/267 (12%) Query: 8 HSFLCRVTGLSSHQVIVDPDSV--LDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 L + GL+ + + D + +DD+ + ++ + ++ I R+FY + Sbjct: 31 KELLSYLFGLNYSDLFLHMDDIFLIDDKVK----EVFLKVKRKYPVNYITQNRNFYGLDF 86 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 ++ D PR ETE+LV+ A+ R++K ILDL TG+G + ++++K S G+ Sbjct: 87 YINEDVLIPRYETEVLVEEAIK----RVKKG---VILDLCTGSGCIPISVMKNSGIDFGI 139 Query: 126 GVDISCKALEIAKSNAVTNGVSER------FDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179 GVDIS AL++AK+N +S++ FD L+ D + FD+I NPPY++ Sbjct: 140 GVDISFNALKVAKANK-KRLLSDKKLKFVCFDVLEIDKIFKDKIEFDLITCNPPYVD--- 195 Query: 180 VDCLGLEVRD---FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236 + E D ++P +L +GL Y+ + + + K+G EI + K+D++ Sbjct: 196 ---INGEYEDSIMYEPSEALFADDNGLKFYKKLLYKLPKLCKKNGFIIFEIPCD-KLDMI 251 Query: 237 R-IFESRKLFLVNAFKDYGGNDRVLLF 262 + IF + + LV KD G +RVL++ Sbjct: 252 KNIFYGKDIELV---KDLSGKERVLIW 275 >gi|116625720|ref|YP_827876.1| HemK family modification methylase [Candidatus Solibacter usitatus Ellin6076] gi|116228882|gb|ABJ87591.1| modification methylase, HemK family [Candidatus Solibacter usitatus Ellin6076] Length = 272 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 62/186 (33%), Positives = 93/186 (50%), Gaps = 21/186 (11%) Query: 58 RDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117 ++FY+ ++ D PRPETE +V++AL + R R+LD+GTG+GA+ + L Sbjct: 77 QEFYSREFRVTPDVLIPRPETEHVVEAALEVA------RGAKRVLDVGTGSGALAITLRL 130 Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERF------DTLQSDWFSSVEGLFDVIVSN 171 E + DIS +A +A NA G + F D + +D ++IVSN Sbjct: 131 EM-GTEAWATDISAEAATVAAGNAARLGANVHFAVCDLMDAIAAD-------SMNLIVSN 182 Query: 172 PPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231 PPY+ + L EVRDF+P ++L GG G Y I R L G +E+G+ Sbjct: 183 PPYVPLAHREGLQREVRDFEPHVALFGGQTGFELYDRIVADAPRVLRPGGWLIMELGFT- 241 Query: 232 KVDVVR 237 +D VR Sbjct: 242 SLDHVR 247 >gi|227495019|ref|ZP_03925335.1| polypeptide chain release factor methyltransferase [Actinomyces coleocanis DSM 15436] gi|226831471|gb|EEH63854.1| polypeptide chain release factor methyltransferase [Actinomyces coleocanis DSM 15436] Length = 280 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 61/203 (30%), Positives = 94/203 (46%), Gaps = 14/203 (6%) Query: 30 LDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFS 89 LD Q+ + + R E + ILG FY + L F RPETE LV++AL + Sbjct: 45 LDGDQQQLIEEMVTRRCNREPLAYILGKMWFYGLELKAEPGVFCVRPETETLVETALNWG 104 Query: 90 LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 + + + LDL +G+GA+ LAL P ++ G++ S AL A+ NA G+ R Sbjct: 105 SSESKTAENLEALDLCSGSGAIALALQANLPNWQVTGLEQSSTALGNAQENAEKLGLPVR 164 Query: 150 FDT-----LQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG-GIDGL 203 F+ + W S + ++VSNPPYI + ++P +L G G DG+ Sbjct: 165 FEQGDATVVNPQWRSKM----SLVVSNPPYIPPRTLPA----ETTYEPAAALWGFGEDGM 216 Query: 204 SHYRTIADGVSRHLNKDGLCSVE 226 I + +L GL +E Sbjct: 217 EIPAKIIEVAWEYLLPGGLFLME 239 >gi|313112841|ref|ZP_07798488.1| protein-(glutamine-N5) methyltransferase [Faecalibacterium cf. prausnitzii KLE1255] gi|310624911|gb|EFQ08219.1| protein-(glutamine-N5) methyltransferase [Faecalibacterium cf. prausnitzii KLE1255] Length = 324 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 70/277 (25%), Positives = 113/277 (40%), Gaps = 47/277 (16%) Query: 27 DSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL 86 D VL + L R + E + + G F + L + PR +TE++ ++A Sbjct: 47 DRVLTTEEAEKLEALCTRREQREPLQYLCGIWSFLDFDLAVGPGVLCPRADTEVVAEAA- 105 Query: 87 AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA----- 141 A +L I R+LDL GTG + L + + P + V+ S +A + N Sbjct: 106 ANTLTGIA---APRVLDLCAGTGCLGLGVKRFCPAAQVTCVEKSPEAFVYLEKNCRCALK 162 Query: 142 ---------VTNGVSERFDTLQSDWFSSV----------------------------EGL 164 + E+ D DW ++ EG Sbjct: 163 GQGGQTEDLLEPTAFEQADAPAFDWGPALNALRAKAKPAYAVQPVEGDLFTYWQGLPEGQ 222 Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224 D+IVSNPPY+ + + L EV +P ++L+ G DGL YR +A+ L G Sbjct: 223 LDLIVSNPPYLTAEEMRHLQPEVAQ-EPAMALEAGKDGLVFYRALAEHYQNALRPGGALV 281 Query: 225 VEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 +EIG+ Q+ V + + + KD+GGNDR ++ Sbjct: 282 LEIGWQQRQAVAALLAANGWADIECRKDFGGNDRCMI 318 >gi|187918070|ref|YP_001883633.1| peptide release factor-glutamine N5-methyltransferase [Borrelia hermsii DAH] gi|119860918|gb|AAX16713.1| peptide release factor-glutamine N5-methyltransferase [Borrelia hermsii DAH] Length = 277 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 61/210 (29%), Positives = 104/210 (49%), Gaps = 12/210 (5%) Query: 22 VIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELL 81 ++ + + L ++ L + I I+ ILG ++F ++ ++ PR +TE L Sbjct: 35 ILANTNKTLTKQEEHKLLSQIKNIKSGTPINYILGTKEFMGIKFYINKHVLIPRADTECL 94 Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV-DISCKALEIAKSN 140 V+ AL +I+K ++ RILDL G+G C+ L + V + DIS KAL ++ N Sbjct: 95 VEEALI----QIKKHNLNRILDLCCGSG--CIGLTIAYYLKRKVTLSDISTKALRVSLRN 148 Query: 141 AVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVR-DFDPRISLDG- 198 + + SD ++ F++I++NPPY+ D L ++ + +PRI+L G Sbjct: 149 TQRLKLENYIEIQHSDLLKYIDKEFELIITNPPYLNK---DELKIKEKLAKEPRIALLGF 205 Query: 199 GIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228 G DGL + I L K+GL VE+ Sbjct: 206 GRDGLKIPKKIIIQAKHKLTKNGLLIVEMA 235 >gi|302185078|ref|ZP_07261751.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Pseudomonas syringae pv. syringae 642] Length = 302 Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 67/219 (30%), Positives = 106/219 (48%), Gaps = 12/219 (5%) Query: 27 DSVLDDRQRFFLTNAIVRSLKHESIHRI-----LGWRDFYNVRLTLSSDTFEPRPETELL 81 DS LD R + + R +K R+ LG F + + PR L Sbjct: 54 DSYLDCRLEVDEISELQRLIKRRIDERVPTPYLLGEAWFCGMSFIVDDRVLIPRSPIAEL 113 Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 ++ A L + RILDL TG+G + +A + P + D+S ALE+A N Sbjct: 114 IEERFAPWL----ADEPARILDLCTGSGCIGIACAEVFPEAEVALADLSYDALEVANQNI 169 Query: 142 VTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200 +G+ +R T+Q D F + G FD+IVSNPPY+++ + E + +P ++L G Sbjct: 170 ERHGMEDRVYTVQGDGFDGLPGQRFDLIVSNPPYVDAEDFADMPDEYQ-HEPELALACGS 228 Query: 201 DGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 DGL+ R + + HL++ GL VE+G N +V V ++ Sbjct: 229 DGLNLVRRMLAQAADHLHEKGLLIVEVG-NSQVHVQALY 266 >gi|291444170|ref|ZP_06583560.1| methytransferase [Streptomyces roseosporus NRRL 15998] gi|291347117|gb|EFE74021.1| methytransferase [Streptomyces roseosporus NRRL 15998] Length = 266 Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 68/231 (29%), Positives = 106/231 (45%), Gaps = 28/231 (12%) Query: 20 HQVIVDPD--SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPE 77 H+ V P S+L +R+ L L+H +LGW +F+ R+ + + F PR Sbjct: 35 HEAAVSPAELSLLAERRAAGL------PLEH-----VLGWAEFHGRRIAVDAGVFVPRRR 83 Query: 78 TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137 TE LV A A + +R VV +DL G+GA+ +AL D+ A+ A Sbjct: 84 TEFLVAQAAALA----PRRAVV--VDLCCGSGALGVALATALDRVDLHACDVEPAAVRCA 137 Query: 138 KSNAVTNGVSERFDTLQSDWF----SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPR 193 + N V + + + D F + + G DV+++N PY+ + V+ L E R +PR Sbjct: 138 RRN-----VGDLGEVYEGDLFDPLPARLRGRVDVLLANVPYVPTADVELLPAEARVHEPR 192 Query: 194 ISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 ++LDGG DGL R +A L G +E Q+ V I + L Sbjct: 193 VALDGGGDGLDVMRRVAAEAPAWLAPGGSLLMEASERQRDVAVEILRTAGL 243 >gi|297797429|ref|XP_002866599.1| methylase family protein [Arabidopsis lyrata subsp. lyrata] gi|297312434|gb|EFH42858.1| methylase family protein [Arabidopsis lyrata subsp. lyrata] Length = 365 Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 57/184 (30%), Positives = 87/184 (47%), Gaps = 8/184 (4%) Query: 57 WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116 WRD L + PRPETEL+VD + R E DLGTG+GA+ + + Sbjct: 152 WRDLV---LCVEEGVLIPRPETELIVDMVEEL-VTRDEWFKKGFWADLGTGSGAIAIGIA 207 Query: 117 KE-SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL---FDVIVSNP 172 K + + D+S A+ +A N G+ + + WF ++GL +VSNP Sbjct: 208 KVLGSRGRVIATDLSPVAVAVAGKNVQRYGLEGMIEVREGSWFEPLKGLEGKLVGLVSNP 267 Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232 PYI S + L EV +P+++LDGGIDG + G S+ L + G E ++ Sbjct: 268 PYIPSDDIPGLQAEVGKHEPKLALDGGIDGTDSLLHLCYGASQMLQRGGFFVFETNGEKQ 327 Query: 233 VDVV 236 ++ Sbjct: 328 SKMI 331 >gi|296082794|emb|CBI21799.3| unnamed protein product [Vitis vinifera] Length = 254 Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 62/212 (29%), Positives = 96/212 (45%), Gaps = 16/212 (7%) Query: 57 WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRIL--DLGTGTGAVCLA 114 WRD L++ PRPETE+ VD + D+ + L DLGTG+GA+ + Sbjct: 42 WRDLV---LSVQDGVLIPRPETEVFVDLVGDVV---TQNGDLTQGLWADLGTGSGAIAIG 95 Query: 115 LLK-ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS---VEGLFDVIVS 170 + + P + + D+S A+ +A N + + + Q WF VEG +VS Sbjct: 96 IGRILGPRGRVIATDLSPVAVSVASFNVQRYSLQDIIEIRQGSWFEPLKDVEGKLSGLVS 155 Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230 NPPYI S + L EV +PR++LDGG+DG+ + +G + L G E Sbjct: 156 NPPYIPSDHISGLQPEVGWHEPRLALDGGVDGIDALLHLCNGAASMLKPGGFFIFETNGE 215 Query: 231 QK----VDVVRIFESRKLFLVNAFKDYGGNDR 258 ++ VD + + V D+ G R Sbjct: 216 KQCKFLVDYMENESKGNFYDVKIVPDFAGIQR 247 >gi|330986203|gb|EGH84306.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Pseudomonas syringae pv. lachrymans str. M301315] Length = 302 Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 59/187 (31%), Positives = 94/187 (50%), Gaps = 7/187 (3%) Query: 54 ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113 +LG F + + PR L++ A L + RILDL TG+G + + Sbjct: 86 LLGEAWFCGMSFIVDDRVLIPRSPIAELIEERFAPWL----ANEPARILDLCTGSGCIGI 141 Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNP 172 A + P + D+S ALE+A N +G+ + T+Q D F + G FD+IVSNP Sbjct: 142 ACAEVFPEAEVALADLSYDALEVANQNIERHGMEDHVYTVQGDGFDGLPGQRFDLIVSNP 201 Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232 PY+++ + E + +P ++L G DGL+ R + + HLN+ GL VE+G N + Sbjct: 202 PYVDAEDFADMPDEYQ-HEPELALACGSDGLNLVRRMLAQAADHLNEKGLLIVEVG-NSQ 259 Query: 233 VDVVRIF 239 V V ++ Sbjct: 260 VHVQALY 266 >gi|225462209|ref|XP_002269180.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 356 Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 62/212 (29%), Positives = 96/212 (45%), Gaps = 16/212 (7%) Query: 57 WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRIL--DLGTGTGAVCLA 114 WRD L++ PRPETE+ VD + D+ + L DLGTG+GA+ + Sbjct: 144 WRDLV---LSVQDGVLIPRPETEVFVDLVGDVV---TQNGDLTQGLWADLGTGSGAIAIG 197 Query: 115 LLK-ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS---VEGLFDVIVS 170 + + P + + D+S A+ +A N + + + Q WF VEG +VS Sbjct: 198 IGRILGPRGRVIATDLSPVAVSVASFNVQRYSLQDIIEIRQGSWFEPLKDVEGKLSGLVS 257 Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230 NPPYI S + L EV +PR++LDGG+DG+ + +G + L G E Sbjct: 258 NPPYIPSDHISGLQPEVGWHEPRLALDGGVDGIDALLHLCNGAASMLKPGGFFIFETNGE 317 Query: 231 QK----VDVVRIFESRKLFLVNAFKDYGGNDR 258 ++ VD + + V D+ G R Sbjct: 318 KQCKFLVDYMENESKGNFYDVKIVPDFAGIQR 349 >gi|145596154|ref|YP_001160451.1| HemK family modification methylase [Salinispora tropica CNB-440] gi|145305491|gb|ABP56073.1| modification methylase, HemK family [Salinispora tropica CNB-440] Length = 309 Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 59/203 (29%), Positives = 96/203 (47%), Gaps = 15/203 (7%) Query: 31 DDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSL 90 D R+RF + R E + + G F ++ L + F PRPETELL + + Sbjct: 61 DQRRRF--DALVARRADREPLQHLTGSAPFRHLELAVGPGVFVPRPETELLA----GWGV 114 Query: 91 PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN-GVSER 149 + + ++DL +G+GA+ LA+ +E P + V V+ S AL + NA + V +R Sbjct: 115 EQARREAAPLVVDLCSGSGAIALAVAQEVPAARVVAVEGSPAALSWLRRNATSRAAVGDR 174 Query: 150 ------FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203 D SD + G DV++ NPPY+ + +V + EV DP ++ G+DGL Sbjct: 175 PVEVVAADVTASDLLDDLLGRVDVLLCNPPYVPAGVV--VPPEVSRHDPARAVFAGMDGL 232 Query: 204 SHYRTIADGVSRHLNKDGLCSVE 226 + R + + L G +E Sbjct: 233 AVIRPVVPRAAVLLRPGGRLGIE 255 >gi|313157194|gb|EFR56624.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Alistipes sp. HGB5] Length = 280 Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 69/230 (30%), Positives = 106/230 (46%), Gaps = 19/230 (8%) Query: 14 VTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFE 73 ++GLS+ ++ DP + L+ + L + + + + ++G +F + Sbjct: 35 LSGLSASALLTDPGAPLEIAE---LDDILGQLAAGRPVQYVVGRTEFCGRTFAVHEGVLI 91 Query: 74 PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133 PRPETE L + +A + K + +LD+GTG+G + L P + DIS A Sbjct: 92 PRPETEELA-AWIAQA-----KTEAATLLDVGTGSGCIAATLALALPGAQVYAADISDTA 145 Query: 134 LEIAKSN--AVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFD 191 LE A N A+ GV R SD G FDVIVSNPPY+ + + + VR+++ Sbjct: 146 LETAARNCRALGAGVILRKADALSDLAEVFPGPFDVIVSNPPYVPQSDLPAMHVNVREYE 205 Query: 192 PRISL----DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237 P +L D D L YR IA R L G EI Y + + +R Sbjct: 206 PHEALLVPDD---DPLRFYRAIARAGRRTLRPGGRLYFEI-YERFAEAMR 251 >gi|239940731|ref|ZP_04692668.1| putative methylase [Streptomyces roseosporus NRRL 15998] gi|239987209|ref|ZP_04707873.1| putative methylase [Streptomyces roseosporus NRRL 11379] Length = 263 Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 68/231 (29%), Positives = 106/231 (45%), Gaps = 28/231 (12%) Query: 20 HQVIVDPD--SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPE 77 H+ V P S+L +R+ L L+H +LGW +F+ R+ + + F PR Sbjct: 32 HEAAVSPAELSLLAERRAAGL------PLEH-----VLGWAEFHGRRIAVDAGVFVPRRR 80 Query: 78 TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137 TE LV A A + +R VV +DL G+GA+ +AL D+ A+ A Sbjct: 81 TEFLVAQAAALA----PRRAVV--VDLCCGSGALGVALATALDRVDLHACDVEPAAVRCA 134 Query: 138 KSNAVTNGVSERFDTLQSDWF----SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPR 193 + N V + + + D F + + G DV+++N PY+ + V+ L E R +PR Sbjct: 135 RRN-----VGDLGEVYEGDLFDPLPARLRGRVDVLLANVPYVPTADVELLPAEARVHEPR 189 Query: 194 ISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 ++LDGG DGL R +A L G +E Q+ V I + L Sbjct: 190 VALDGGGDGLDVMRRVAAEAPAWLAPGGSLLMEASERQRDVAVEILRTAGL 240 >gi|327265759|ref|XP_003217675.1| PREDICTED: hemK methyltransferase family member 1-like [Anolis carolinensis] Length = 430 Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 70/239 (29%), Positives = 108/239 (45%), Gaps = 21/239 (8%) Query: 43 VRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETE----LLVDSALAFSLPRIEKRDV 98 + L+ + +LG DF ++ L + F PR ETE L+VD LP + ++ Sbjct: 185 AKRLQRMPVQYVLGEWDFQDLTLKMKPPVFIPRRETEELVTLVVDEECRKRLPSSDCKEP 244 Query: 99 --------VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150 IL++G G+GA+ L+LLK+ P K + +D A+ + K NA + ER Sbjct: 245 RLPPETHGPVILEVGCGSGAIALSLLKKLPHSKVIAIDKLEAAVNLTKENAERLNLQERV 304 Query: 151 DTLQSDWFSS------VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204 L + SS GL D I+SNPPY+ + L E+ ++ +LDGG DG++ Sbjct: 305 SVLHHEVSSSSWKYLLPWGLVDTIISNPPYVFHEDMTHLATEIHSYEDLGALDGGSDGMN 364 Query: 205 HYRTIADGVSRHLNKDG--LCSVEIGYNQKV-DVVRIFESRKLFLVNAFKDYGGNDRVL 260 R I L G VE + + V + +R L + KD+ G R L Sbjct: 365 IIREILHLACYLLKDYGSVFLEVEPRHPEMVKNWLRGHPDLSLVVCGTHKDFCGKLRFL 423 >gi|325681464|ref|ZP_08160990.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Ruminococcus albus 8] gi|324106954|gb|EGC01244.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Ruminococcus albus 8] Length = 292 Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 62/199 (31%), Positives = 96/199 (48%), Gaps = 9/199 (4%) Query: 44 RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103 + + E + +LG +FY + L + PR +TE L D A+A + +K D + + D Sbjct: 66 KRVNGEPLQYLLGEWEFYGLTLKVGKGVLIPRQDTETLADLAVA----KYKKTDNIVVAD 121 Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSS 160 L +G+G + LAL K + V+ S A K N N + + D L SD + Sbjct: 122 LCSGSGCIALALEKHLKCREVWAVEKSEAAAGYLKDNLALNHSAVKLVMGDVLDSDTANK 181 Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220 + D+IV NPPY+ + + L EV +P+ +L GG DGL YR + L + Sbjct: 182 IPAA-DLIVCNPPYLTADDMAALQTEVT-HEPKEALYGGEDGLDFYRAVTRIWKDRLKQG 239 Query: 221 GLCSVEIGYNQKVDVVRIF 239 G EIG Q+ DV++I Sbjct: 240 GTLIYEIGAGQEDDVMQIM 258 >gi|110635204|ref|YP_675412.1| HemK family modification methylase [Mesorhizobium sp. BNC1] gi|110286188|gb|ABG64247.1| modification methylase, HemK family [Chelativorans sp. BNC1] Length = 234 Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 60/211 (28%), Positives = 99/211 (46%), Gaps = 9/211 (4%) Query: 60 FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119 F + L L+ D PR ETELL SA+ L + +V +D+ G+G + L + Sbjct: 23 FMGIELELAPDVLVPREETELLGRSAVDL-LKGMAGSPIV--IDMCCGSGNLALGIAAAV 79 Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-----EGLFDVIVSNPPY 174 P + D++ + +A+ NA G+ +R +Q D FS + EG D +VSNPPY Sbjct: 80 PAARLWASDLTESTVSLARRNAERLGLLDRVKVVQGDLFSGLADEGLEGRVDFVVSNPPY 139 Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234 I + ++ + + +PR + DGG GLS ++ + L + G + E G Q+ Sbjct: 140 ISTSRLETDRAHLLENEPREAFDGGPYGLSIHQRLVREAPTFLKRGGWLAFEFGEGQERQ 199 Query: 235 VVRIFESRKLFLVNAF-KDYGGNDRVLLFCR 264 V + + ++ F D G RV + R Sbjct: 200 VAILLKRAGMYEEPRFASDQAGKPRVAIARR 230 >gi|302529794|ref|ZP_07282136.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptomyces sp. AA4] gi|302438689|gb|EFL10505.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptomyces sp. AA4] Length = 288 Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 61/226 (26%), Positives = 103/226 (45%), Gaps = 16/226 (7%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101 + + K + + GW N+ + + + F PRPETELL++ + F ++ R+ + Sbjct: 62 VAQRAKRIPLQYLTGWAALGNITVNVGAGVFVPRPETELLLEWGVKF----LQGREYPVV 117 Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF-------DTLQ 154 +DL TG+GA+ LA+ E P VD+ +AL A+ NA + + D Sbjct: 118 VDLCTGSGALALAVAHERPDAVVYAVDVDPQALAWARHNADVHSAAGNTPIRLYSGDIAD 177 Query: 155 SDWFSSVEGLFDVIVSNPPYI-ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213 F+ ++GL D+++ NPPY+ E V EV + DP ++ GL+ R Sbjct: 178 PTMFAELDGLVDLVLCNPPYVPEGTPVPP---EVGEHDPARAVFAEESGLAVIRHAIAAG 234 Query: 214 SRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL-VNAFKDYGGNDR 258 +R L G ++E V + +R++ V DY G R Sbjct: 235 ARLLRPGGGLAIEHDDTHGSAVPALVRARRVLTGVEDHPDYTGRAR 280 >gi|70731701|ref|YP_261443.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Pseudomonas fluorescens Pf-5] gi|68346000|gb|AAY93606.1| modification methylase, HemK family [Pseudomonas fluorescens Pf-5] Length = 302 Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 56/147 (38%), Positives = 81/147 (55%), Gaps = 9/147 (6%) Query: 93 IEKR-------DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145 IEKR + RILDL TG+G + +A E + V D+S +ALE+A N +G Sbjct: 114 IEKRFEPWLGSEPARILDLCTGSGCIGIACAYEFRDAEVVLADLSFEALEVANQNIERHG 173 Query: 146 VSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204 V ER T+Q D F + G FD+IVSNPPY+++ + E + +P + L G DGL+ Sbjct: 174 VDERVFTVQGDGFDGLPGQRFDLIVSNPPYVDAEDFADMPDEYQ-HEPELGLACGEDGLN 232 Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQ 231 R + + HL + GL VE+G +Q Sbjct: 233 LVRRMLAEAADHLTEKGLLIVEVGNSQ 259 >gi|315503944|ref|YP_004082831.1| protein-(glutamine-n5) methyltransferase, release factor-specific [Micromonospora sp. L5] gi|315410563|gb|ADU08680.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Micromonospora sp. L5] Length = 296 Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 56/200 (28%), Positives = 89/200 (44%), Gaps = 13/200 (6%) Query: 34 QRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRI 93 QR L + R + E + +LG F ++ L + F PRPETELL + + R Sbjct: 46 QRDRLDALVGRRVTREPLQHLLGSAGFRHLELAVGPGVFVPRPETELLA----GWGIERA 101 Query: 94 EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE----- 148 + ++DL +G+GA+ LA+ +E P + V V+ S AL + N + Sbjct: 102 REHAAPLVVDLCSGSGAIALAVAQEVPAARVVAVERSPAALAWLRRNVAGRAAAGDRPVE 161 Query: 149 --RFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206 D D + + G DV++ NPPY+ + + EV DP ++ GG DGL Sbjct: 162 VVAADVTDPDLLADLAGRVDVLLCNPPYVPRSV--AVPPEVAGHDPDEAVFGGADGLDVI 219 Query: 207 RTIADGVSRHLNKDGLCSVE 226 R + + L G +E Sbjct: 220 RPVVGRAAALLRPGGAIGIE 239 >gi|66547731|ref|XP_393324.2| PREDICTED: hemK methyltransferase family member 1-like isoform 1 [Apis mellifera] Length = 349 Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 63/237 (26%), Positives = 106/237 (44%), Gaps = 25/237 (10%) Query: 46 LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLG 105 L I I+G DF ++ L L F PRPETE+LV L + + IL++G Sbjct: 111 LSRMPIQYIIGEWDFCDITLKLVPPIFIPRPETEILVHYILKAL--KSSDNNKQEILEIG 168 Query: 106 TGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW--FSSVE- 162 G+GA+ LA+ + + +D + +A E+ K N + +R + + S+E Sbjct: 169 CGSGAISLAIAHANKTVHCIAIDSNPEACELTKKNRDKLNLKDRISVVHATLKDNGSIEI 228 Query: 163 ---------------GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207 +FD IVSNPPYI + + L E++ ++ + DGG DGL + Sbjct: 229 SNESKNESKNLDLNSKIFDFIVSNPPYIPTKQISTLIPEIKIYEDLTAFDGGDDGLKVIK 288 Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR----KLFLVNAFKDYGGNDRVL 260 + + L G +E+ + ++ F + KL + +KD+ NDR + Sbjct: 289 PLLKYAAIALKPGGRLFLEVDTTHP-EYIQFFTKKYPILKLQYEHTYKDFCNNDRFI 344 >gi|160872888|ref|ZP_02063020.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Rickettsiella grylli] gi|159121687|gb|EDP47025.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Rickettsiella grylli] Length = 314 Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 54/166 (32%), Positives = 87/166 (52%), Gaps = 6/166 (3%) Query: 74 PRPETELLVDSALAFSLPRIEK-RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCK 132 PR L+ S L P IE + + ILDLGTG+G + +A P + VD S Sbjct: 120 PRSPIAELIQSELN---PWIENTKKIHTILDLGTGSGCIAIACAYAFPEARVDAVDHSKD 176 Query: 133 ALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFD 191 AL++A N + + + + SD+F +++ +D+I+SNPPY+++ CL LE R + Sbjct: 177 ALKVAAVNVKIHKRQGQINLIYSDFFQNLKRRRYDIIMSNPPYVDAEDFMCLPLEYRH-E 235 Query: 192 PRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237 PR +L G DGL I ++L + G+ VE+G ++ + R Sbjct: 236 PRAALAAGKDGLDGVIQILKEAKKYLKEKGILIVEVGNSKNALIKR 281 >gi|254240024|ref|ZP_04933346.1| hypothetical protein PA2G_00659 [Pseudomonas aeruginosa 2192] gi|126193402|gb|EAZ57465.1| hypothetical protein PA2G_00659 [Pseudomonas aeruginosa 2192] Length = 304 Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 66/215 (30%), Positives = 104/215 (48%), Gaps = 8/215 (3%) Query: 27 DSVLDDRQRFFLTNAIVRSLKHE-SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85 D L+D +R L + R ++ +LG F + ++ PR L++ Sbjct: 58 DCRLEDDERAELAEILRRRIEERIPAAYLLGEAWFCGIPFSVDEGVPVPRSPIAELIEQR 117 Query: 86 LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145 A LP + RILDL TG+G + +A + V D+S ALE+A N + Sbjct: 118 FAPWLPA----EPARILDLCTGSGCIGIACAYAFEQAEVVLADLSFDALEVANVNIERHD 173 Query: 146 VSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204 + ER T+Q D F+ + G FD+IVSNPPY+++ + E +P + L G DGL Sbjct: 174 LGERVYTVQGDGFAGLPGQRFDLIVSNPPYVDAEDFADMPAEFH-HEPELGLACGDDGLD 232 Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 R + + HL++ GL VE+G N +V V ++ Sbjct: 233 LVRRMLAEAADHLSEKGLLIVEVG-NSEVHVQALY 266 >gi|331000680|ref|ZP_08324332.1| (glutamine-N5) methyltransferase, ribosomal protein L3-specific [Parasutterella excrementihominis YIT 11859] gi|329570833|gb|EGG52548.1| (glutamine-N5) methyltransferase, ribosomal protein L3-specific [Parasutterella excrementihominis YIT 11859] Length = 299 Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 53/166 (31%), Positives = 85/166 (51%), Gaps = 8/166 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 ILD+ TG+G + + L ++ P + VDIS ALE+A+ N R +QSD F + Sbjct: 134 ILDMCTGSGCLAILLAEKFPQAEVDAVDISSDALEVAEINIADYEFENRVYPIQSDLFEN 193 Query: 161 VEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 ++ +D+I+SNPPY+ ++ L E R ++P ++L G DG+ + V HLN Sbjct: 194 LQNTKYDLIISNPPYVTEASMEGLPQEYR-YEPSLALVAGADGMDIIDRLLKEVKAHLND 252 Query: 220 DGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDYGGNDRVLLFCR 264 +G+ VE+G D F+ R V GG D+V + + Sbjct: 253 NGVLIVELG-----DGAENFKERFPNIEVTWLPTSGGKDQVFMIKK 293 >gi|171059200|ref|YP_001791549.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Leptothrix cholodnii SP-6] gi|170776645|gb|ACB34784.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Leptothrix cholodnii SP-6] Length = 319 Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 50/165 (30%), Positives = 84/165 (50%), Gaps = 5/165 (3%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+LDL TG G++ + P G D+S AL++A+ N + + ER L SD Sbjct: 155 RVLDLCTGNGSLAVLAAMAYPDVVVDGADLSHDALDVARINVQRHQLGERITLLHSDGLK 214 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 SV G +D+I+ NPPY+ + + L E + +P ++L GG DG+ R + + ++L Sbjct: 215 SVNGPYDLILCNPPYVNAQSMAALPPEFK-AEPELALAGGADGMDFIRALLADLPKNLTP 273 Query: 220 DGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 G+ +EIG+ + ++L + G+D+VLL R Sbjct: 274 HGVLVLEIGHERAHFEAAFPRLPAIWL----ETSAGSDQVLLLPR 314 >gi|71892272|ref|YP_278006.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Candidatus Blochmannia pennsylvanicus str. BPEN] gi|71796378|gb|AAZ41129.1| N5-glutamine methyltransferase, modifies ribosomal protein L3 [Candidatus Blochmannia pennsylvanicus str. BPEN] Length = 304 Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 55/170 (32%), Positives = 85/170 (50%), Gaps = 6/170 (3%) Query: 60 FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119 F ++ + F PR L+ S LP RILD+GTG+G + +A+ Sbjct: 98 FCGLKFYVDKRVFIPRSPIGELITSCFNDLLPYYP----YRILDIGTGSGCIAVAIATVY 153 Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESV 178 P + VDIS AL++A+ N + R + SD FS++ L +D+I++NPPY+++ Sbjct: 154 PKSEIDAVDISIDALKVAEHNIKLYNLEHRVFPIHSDLFSNLPQLKYDLIITNPPYVKNS 213 Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228 + L E ++P ISL DGL + I V HLN +G E+G Sbjct: 214 DIYKLPKEFH-YEPVISLSADNDGLKIIQKILMNVIHHLNTNGTLICEVG 262 >gi|301165961|emb|CBW25535.1| putative methyltransferase [Bacteriovorax marinus SJ] Length = 299 Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 69/233 (29%), Positives = 117/233 (50%), Gaps = 9/233 (3%) Query: 38 LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97 +TN +K + I G FY +S + PR ETE+LV++A +F ++ D Sbjct: 64 ITNYFNSLVKGYPLEYIRGRAHFYKSEFDVSENVLIPRSETEILVETASSFLRDWMKMSD 123 Query: 98 V-VRILDLGTGTGAVCLALLKESPF-FKGVGVDISCKALEIAKSNAVTNGVS-ERFDTLQ 154 +RILD+GTG+GA+ ++LL+E P + DIS ALE+A+ N + R +L+ Sbjct: 124 ERLRILDIGTGSGAIIISLLQEMPRPLEAFATDISKDALEVARRNYFNLRYTIPRESSLR 183 Query: 155 ---SDWFSSV-EGLFDVIVSNPPYIESVI-VDCLGLEVRDFDPRISLDGGIDGLSH-YRT 208 +D + + + F +IVSNPPYI+ D + +V +++P ++L D +RT Sbjct: 184 LICTDRMNDLDQEKFHLIVSNPPYIKKREDRDFVHHQVDNYEPHLALYLEDDSYDEWFRT 243 Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 + V L ++G+ +E + D+ + V KDY +R L+ Sbjct: 244 LFKQVLNSLYEEGIFIMEGHEDHLEDLCEVCNMIGFSTVKILKDYTNRNRFLV 296 >gi|298292309|ref|YP_003694248.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Starkeya novella DSM 506] gi|296928820|gb|ADH89629.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Starkeya novella DSM 506] Length = 329 Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 48/143 (33%), Positives = 78/143 (54%), Gaps = 6/143 (4%) Query: 94 EKRDVVRILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVSERFD 151 E + R+LDL TG+G CLA+L F VD+S AL +A N + + +R Sbjct: 146 EPMAITRVLDLCTGSG--CLAILAAMIFPNAEVDAVDLSPDALALAAENVAEHEMGDRVR 203 Query: 152 TLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210 ++ D F ++ G ++D+I++NPPY+++ + L E R +P ++ DGG DGL R I Sbjct: 204 LVEGDLFEALAGEVYDLIITNPPYVDAPAMAALPDEYR-HEPSLAFDGGPDGLDIVRRIL 262 Query: 211 DGVSRHLNKDGLCSVEIGYNQKV 233 +HL+ G EIG +++ Sbjct: 263 TEAPKHLSAQGSLICEIGTGKEI 285 >gi|327480930|gb|AEA84240.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Pseudomonas stutzeri DSM 4166] Length = 307 Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 63/187 (33%), Positives = 91/187 (48%), Gaps = 7/187 (3%) Query: 54 ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113 +LG F + + PR L++ LP KR ILDL TG+G + + Sbjct: 88 LLGQAWFCGLPFIVDERVLIPRSPIGELIEHRFEPWLPGTPKR----ILDLCTGSGCIGI 143 Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNP 172 A E + V DIS ALE+A N +G+ ER T+QSD F + FD+IVSNP Sbjct: 144 ACAYEFLEAEVVLADISFDALEVANRNIEQHGLEERVYTVQSDGFDGLPNQRFDLIVSNP 203 Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232 PY+++ + E +P + L G DGL R + + HL DG+ VE+G N + Sbjct: 204 PYVDAEDFADMPDEFH-HEPELGLACGNDGLDLVRRMLAEAADHLTDDGVLIVEVG-NSQ 261 Query: 233 VDVVRIF 239 V V ++ Sbjct: 262 VHVQALY 268 >gi|303258045|ref|ZP_07344053.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Burkholderiales bacterium 1_1_47] gi|302859064|gb|EFL82147.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Burkholderiales bacterium 1_1_47] Length = 301 Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 53/166 (31%), Positives = 85/166 (51%), Gaps = 8/166 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 ILD+ TG+G + + L ++ P + VDIS ALE+A+ N R +QSD F + Sbjct: 136 ILDMCTGSGCLAILLAEKFPQAEVDAVDISSDALEVAEINIADYEFENRVYPIQSDLFEN 195 Query: 161 VEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 ++ +D+I+SNPPY+ ++ L E R ++P ++L G DG+ + V HLN Sbjct: 196 LQNTKYDLIISNPPYVTEASMEGLPQEYR-YEPSLALVAGADGMDIIDRLLKEVKAHLND 254 Query: 220 DGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDYGGNDRVLLFCR 264 +G+ VE+G D F+ R V GG D+V + + Sbjct: 255 NGVLIVELG-----DGAENFKERFPNIEVTWLPTSGGKDQVFMIKK 295 >gi|323342351|ref|ZP_08082583.1| protein-(glutamine-N5) methyltransferase [Erysipelothrix rhusiopathiae ATCC 19414] gi|322463463|gb|EFY08657.1| protein-(glutamine-N5) methyltransferase [Erysipelothrix rhusiopathiae ATCC 19414] Length = 283 Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 71/233 (30%), Positives = 111/233 (47%), Gaps = 20/233 (8%) Query: 40 NAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR-DV 98 N I + E + +LG+ FY +L ++ PR ETE LV L+ I+ D Sbjct: 57 NKINQLTTDEPLGYVLGYEWFYGYKLFVNEGVLIPRSETEELVGHLLS----DIDAHFDT 112 Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 I D+ G+GA+ +AL KE K DIS +ALE+A+ NA N + +Q D Sbjct: 113 PVIADVACGSGAIGIALAKELNL-KVYASDISEEALEVARRNADYNQAD--MEIMQGDML 169 Query: 159 SSV---EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215 + DV+ NPPYI++ + + V + +P ++L GG DGL YR + + Sbjct: 170 EPLIEKNIKLDVLACNPPYIKNT--EHIQTSVLNNEPHVALFGGEDGLFFYRKVFEKAHL 227 Query: 216 HLNKDGLCSVEIGYNQKVDVVRI----FESRKLFLVNAFKDYGGNDRVLLFCR 264 LN + + EIG++ VV + F K+ L +D G DR++ + Sbjct: 228 VLNDKAVMAFEIGFDIGEAVVALAQEFFSDAKIVLR---QDINGLDRMVFVYK 277 >gi|295111718|emb|CBL28468.1| HemK family putative methylases [Synergistetes bacterium SGP1] Length = 290 Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 71/270 (26%), Positives = 117/270 (43%), Gaps = 18/270 (6%) Query: 1 MQALRDSHSFLCRVTGLSSHQVI--VDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWR 58 + A++++ LC L+S +++ ++ + VL + L + R E + +LG Sbjct: 25 VNAVQEARWLLCDGLRLTSAELLAHLEREVVLPE----ALEAGVRRREAGEPLQYVLGTA 80 Query: 59 DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118 DF+ + PR +TE+LV +AL S R TG A + + Sbjct: 81 DFWGRDFRVGPGVLVPRRDTEVLVRAALTSSR-------RTRPSRSWTGARAAPASPRRS 133 Query: 119 S---PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS--SVEGLFDVIVSNPP 173 S P +G+ + S AL A N +S R L +D +V G D+++SNPP Sbjct: 134 SWSAPLARGILAERSPDALRWAAENLARWNLSSRARLLPTDAPEDIAVRGECDLLISNPP 193 Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233 YI + L EVRD +P ++LDGG+DG+ YR + L +E G + + Sbjct: 194 YIPRGAIPRLMREVRDHEPHLALDGGVDGMDCYRALLASAPAWLKPGAFVILETGESDQA 253 Query: 234 DVVRIFESRKLFLVNAFKDYGGNDRVLLFC 263 +R R +F +D +L C Sbjct: 254 RAIRDAVERSPDRAFSFLQRIADDSAILRC 283 >gi|269103134|ref|ZP_06155831.1| putative adenine-specific methylase [Photobacterium damselae subsp. damselae CIP 102761] gi|268163032|gb|EEZ41528.1| putative adenine-specific methylase [Photobacterium damselae subsp. damselae CIP 102761] Length = 310 Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 48/135 (35%), Positives = 75/135 (55%), Gaps = 2/135 (1%) Query: 95 KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154 K++ RI+DL TG+G + +A P + VDIS AL +A+ N +G+ ++ L+ Sbjct: 130 KQEPTRIMDLCTGSGCIGIACAHMFPEAEVDIVDISTDALAVAEQNIQDHGLEQQVTPLR 189 Query: 155 SDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213 SD V + L+D+IV+NPPY++ +D L E R +P + L G DGL R I Sbjct: 190 SDLLRDVPKDLYDLIVTNPPYVDQEDMDNLPDEFR-HEPELGLAAGSDGLKLVRRILSNA 248 Query: 214 SRHLNKDGLCSVEIG 228 +L +DG+ E+G Sbjct: 249 PNYLKEDGVLICEVG 263 >gi|7705409|ref|NP_057257.1| hemK methyltransferase family member 1 [Homo sapiens] gi|18203634|sp|Q9Y5R4|HEMK1_HUMAN RecName: Full=HemK methyltransferase family member 1; AltName: Full=M.HsaHemKP gi|4589248|gb|AAD26417.1|AF131220_1 HEMK homolog [Homo sapiens] gi|5764550|gb|AAD51328.1|AF172244_1 HEMK homolog 7kb isoform [Homo sapiens] gi|12653971|gb|AAH00781.1| HemK methyltransferase family member 1 [Homo sapiens] gi|119585529|gb|EAW65125.1| HemK methyltransferase family member 1, isoform CRA_a [Homo sapiens] gi|123982676|gb|ABM83079.1| HemK methyltransferase family member 1 [synthetic construct] gi|123982686|gb|ABM83084.1| HemK methyltransferase family member 1 [synthetic construct] gi|123997355|gb|ABM86279.1| HemK methyltransferase family member 1 [synthetic construct] gi|307684470|dbj|BAJ20275.1| HemK methyltransferase family member 1 [synthetic construct] Length = 338 Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 69/229 (30%), Positives = 103/229 (44%), Gaps = 12/229 (5%) Query: 44 RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPR---IEKRDVVR 100 R L+ + ILG DF + L + F PRPETE LV+ L R + Sbjct: 103 RRLQRMPVQYILGEWDFQGLSLRMVPPVFIPRPETEELVEWVLEEVAQRSHAVGSPGSPL 162 Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD---- 156 IL++G G+GA+ L+LL + P + + VD A+ + NA + +R + D Sbjct: 163 ILEVGCGSGAISLSLLSQLPQSRVIAVDKREAAISLTHENAQRLRLQDRIWIIHLDMTSE 222 Query: 157 --WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214 W G D+IVSNPPY+ ++ L E+R ++ +LDGG +G+ I Sbjct: 223 RSWTHLPWGPMDLIVSNPPYVFHQDMEQLAPEIRSYEDPAALDGGEEGMDIITHILALAP 282 Query: 215 RHLNKDGLCSVEIGYNQKVDVVRIFESRK---LFLVNAFKDYGGNDRVL 260 R L G +E+ V +SR L LV +D+ G R L Sbjct: 283 RLLKDSGSIFLEVDPRHPELVSSWLQSRPDLYLNLVAVRRDFCGRPRFL 331 >gi|222823580|ref|YP_002575154.1| modification methylase, HemK family [Campylobacter lari RM2100] gi|222538802|gb|ACM63903.1| modification methylase, HemK family [Campylobacter lari RM2100] Length = 267 Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 69/251 (27%), Positives = 114/251 (45%), Gaps = 15/251 (5%) Query: 11 LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70 LC + + ++P+ +D++ F + + R L E + FY Sbjct: 26 LCELLQKDKAWIFLNPEFQIDEKIFF---DYVDRFLNGEPFEYLFEKTQFYGFDFFTQKG 82 Query: 71 TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130 PR ++E+L++ L ++ IL++G G+G + ++L+K F DI+ Sbjct: 83 VLIPRFDSEILLERCLEI----LDHNSFNNILEIGFGSGILSISLVKLKQIFIQ-ACDIN 137 Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDF 190 KAL +AK NA + VS + D F +++G FD I SNPPY+++ L V++ Sbjct: 138 PKALNLAKKNADFHNVSNLINFQLCD-FKNMQGEFDFIFSNPPYVKNDYP--LDKWVQN- 193 Query: 191 DPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAF 250 +P +L GG G I H K C E GY+QK + +I E F + Sbjct: 194 EPYDALFGGDKGWEILEEIIIFAKNHNTKVLAC--EFGYDQKAILNKILEENN-FKATFY 250 Query: 251 KDYGGNDRVLL 261 +DY G DR + Sbjct: 251 QDYNGFDRAFV 261 >gi|74317288|ref|YP_315028.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Thiobacillus denitrificans ATCC 25259] gi|74056783|gb|AAZ97223.1| modification methylase HemK [Thiobacillus denitrificans ATCC 25259] Length = 308 Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 61/178 (34%), Positives = 88/178 (49%), Gaps = 12/178 (6%) Query: 91 PRIEKRDVVR-ILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVS 147 P +E D V +LDL TG+G CLA+L F VD+S AL +A N + Sbjct: 124 PWVEDADAVEDVLDLCTGSG--CLAVLAALAFPSADVDAVDLSQDALAVAARNVADYDLD 181 Query: 148 ERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206 R ++SD F+++ G +D+I+SNPPY+++ V L E R +P ++L G DGL Sbjct: 182 ARIALIESDLFATLGGRRYDLIISNPPYVDAAAVAALPAEYR-AEPALALGSGEDGLDAT 240 Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 R I HL GL VEIG+N+ E+ L + D G D+ + R Sbjct: 241 RKILAAAGDHLKPGGLLVVEIGHNRDA-----LEAAYPALPFTWLDTEGGDQFVFMLR 293 >gi|167751821|ref|ZP_02423948.1| hypothetical protein ALIPUT_00063 [Alistipes putredinis DSM 17216] gi|167660062|gb|EDS04192.1| hypothetical protein ALIPUT_00063 [Alistipes putredinis DSM 17216] Length = 282 Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 71/229 (31%), Positives = 101/229 (44%), Gaps = 15/229 (6%) Query: 16 GLSSHQVIVDPDSVL--DDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFE 73 GL ++ +PD L ++ R A R L++ +LG +FY + + Sbjct: 37 GLCLTDLVAEPDKELGINELDRIIGELAAGRPLQY-----VLGHTEFYGLDFQVREGVLI 91 Query: 74 PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133 PRPETE LV P D +LD+GTG+G + + L + P + VDIS KA Sbjct: 92 PRPETEELVRWIAESPAP-----DNPAVLDVGTGSGCIAVTLARLIPGARVTAVDISEKA 146 Query: 134 LEIAKSNA--VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFD 191 L IA+ NA + V R + F FD+IVSNPPYI + + V ++ Sbjct: 147 LSIARENARRLDAEVDFRQGDALGELFPGQREQFDLIVSNPPYIPRREKASMRVNVTGYE 206 Query: 192 PRISL-DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 P +L D L YR IA R L G EI N + +R+ Sbjct: 207 PAEALFVEDDDPLIFYRAIARNARRLLRPGGRLYFEIHENFADETLRML 255 >gi|91975757|ref|YP_568416.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Rhodopseudomonas palustris BisB5] gi|91682213|gb|ABE38515.1| modification methylase, HemK family [Rhodopseudomonas palustris BisB5] Length = 330 Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 51/139 (36%), Positives = 76/139 (54%), Gaps = 6/139 (4%) Query: 98 VVRILDLGTGTGAVCLALL--KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155 V R+LDL TG+G CLA+L + P + VD+S AL +A N +GV ER Sbjct: 165 VERVLDLCTGSG--CLAILAARNFPHAEIDAVDLSKDALAVAAKNVADHGVGERLTLHHG 222 Query: 156 DWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214 + F+ + E +D+I++NPPY+++ + L E R +P ++ DGG DGL R I D Sbjct: 223 NLFAPLGEARYDLIITNPPYVDAEGMASLPAECRA-EPAMAFDGGDDGLDIIRRILDEAK 281 Query: 215 RHLNKDGLCSVEIGYNQKV 233 HL DG E+G + + Sbjct: 282 DHLTPDGGLLCEVGRGRAL 300 >gi|170727358|ref|YP_001761384.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Shewanella woodyi ATCC 51908] gi|169812705|gb|ACA87289.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Shewanella woodyi ATCC 51908] Length = 314 Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 59/176 (33%), Positives = 93/176 (52%), Gaps = 7/176 (3%) Query: 91 PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150 P + + V R+LDL TG+ + +A E + +DIS ALE+A+ N T GV +R Sbjct: 127 PWLYNKPVNRVLDLCTGSACIAIACAYEFDEAEVDALDISEDALEVAQINIETLGVMDRV 186 Query: 151 DTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208 ++S+ FS++ +D+IVSNPPY+++ +D + E +P I L G DGL + Sbjct: 187 FPIESNLFSAIPKGPHYDLIVSNPPYVDAEDIDDMPEEYH-HEPEIGLASGRDGLDLTKR 245 Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 I + +L +DGL VE+G N V + F V+ ++GG D V + R Sbjct: 246 ILANAADYLTEDGLLVVEVG-NSMVHLAEQFPDVPFTWVSF--EHGG-DGVFVLTR 297 >gi|312139168|ref|YP_004006504.1| sam dependent methyltransferase [Rhodococcus equi 103S] gi|325673527|ref|ZP_08153218.1| protein-(glutamine-N5) methyltransferase [Rhodococcus equi ATCC 33707] gi|311888507|emb|CBH47819.1| SAM dependent methyltransferase [Rhodococcus equi 103S] gi|325555548|gb|EGD25219.1| protein-(glutamine-N5) methyltransferase [Rhodococcus equi ATCC 33707] Length = 297 Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 81/257 (31%), Positives = 120/257 (46%), Gaps = 32/257 (12%) Query: 23 IVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLV 82 +VDP SV+++ + + R ++ + I G NV L + F PRPETELL+ Sbjct: 49 LVDP-SVIEEYREL-----VARRVQRIPLQHITGSTAMGNVSLEVGPGVFVPRPETELLL 102 Query: 83 DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKS--- 139 ALA + VV LDL TGTGA+ LA+ P V++ +AL A+ Sbjct: 103 AWALAHLEASGLRAPVV--LDLCTGTGALALAIAHARPDAVVHAVELQPQALAWARRNAD 160 Query: 140 ----------NAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYI-ESVIVDCLGLEVR 188 N V V++R + +EG D++VSNPPYI E ++D EV Sbjct: 161 RRRDAGDTPINLVQGDVTDRA------LLTELEGGVDLVVSNPPYIPEGAVLDP---EVA 211 Query: 189 DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF-LV 247 D DP +L GG DGLS + + + ++R L G +E V +F +R++F V Sbjct: 212 DHDPHTALFGGADGLSVIKPMINNIARWLRIGGAVGIEHDDTNGDQVAELFRARRVFDRV 271 Query: 248 NAFKDYGGNDRVLLFCR 264 D G R ++ R Sbjct: 272 VEHPDLAGRPRFVVAHR 288 >gi|226954021|ref|ZP_03824485.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Acinetobacter sp. ATCC 27244] gi|226835232|gb|EEH67615.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Acinetobacter sp. ATCC 27244] Length = 336 Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 51/143 (35%), Positives = 78/143 (54%), Gaps = 4/143 (2%) Query: 89 SLPRIEK-RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147 SLP K + RILD+ TG+G + +AL P + DIS +ALE+A N + Sbjct: 147 SLPENPKPKTPQRILDMCTGSGCIAIALAYAYPESEVDATDISKEALEVASINTEHHNKQ 206 Query: 148 ERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSH 205 + L+SD FS + E +D+IVSNPPY+++ + L E +P ++L G DGL Sbjct: 207 YQVALLESDLFSKIPAENQYDLIVSNPPYVDAEDMADLPEEFL-HEPELALAAGQDGLDL 265 Query: 206 YRTIADGVSRHLNKDGLCSVEIG 228 R + + +L +DGL +E+G Sbjct: 266 VRKMLAQAADYLTEDGLIVIEVG 288 >gi|146282674|ref|YP_001172827.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Pseudomonas stutzeri A1501] gi|145570879|gb|ABP79985.1| probable DNA methylase [Pseudomonas stutzeri A1501] Length = 307 Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 60/167 (35%), Positives = 85/167 (50%), Gaps = 7/167 (4%) Query: 74 PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133 PR L++ LP KR ILDL TG+G + +A E + V DIS A Sbjct: 108 PRSPIGELIEHRFEPWLPGTPKR----ILDLCTGSGCIGIACAYEFLEAEVVLADISFDA 163 Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDP 192 LE+A N +G+ ER T+QSD F + FD+IVSNPPY+++ + E +P Sbjct: 164 LEVANRNIEQHGLEERVYTVQSDGFDGLPNQRFDLIVSNPPYVDAEDFADMPDEFH-HEP 222 Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 + L G DGL R + + HL DG+ VE+G N +V V ++ Sbjct: 223 ELGLACGNDGLDLVRRMLAEAADHLTDDGVLIVEVG-NSQVHVQALY 268 >gi|224534335|ref|ZP_03674913.1| putative protoporphyrinogen oxidase [Borrelia spielmanii A14S] gi|224514437|gb|EEF84753.1| putative protoporphyrinogen oxidase [Borrelia spielmanii A14S] Length = 277 Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 57/208 (27%), Positives = 98/208 (47%), Gaps = 12/208 (5%) Query: 22 VIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELL 81 +I + L +++ + I K IH IL ++F + TL+ PR +TE L Sbjct: 35 IIANIKKSLTKKEKNLFFDHIDNIEKGTPIHYILRKKEFMGIEFTLNKHVLIPRFDTECL 94 Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL---LKESPFFKGVGVDISCKALEIAK 138 V+ AL +I++ +ILDL G+G + L++ +K+ DIS KAL+I Sbjct: 95 VEEALI----QIQQNGFKKILDLCCGSGCIGLSIAYYMKKKIMLS----DISIKALQIVT 146 Query: 139 SNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG 198 N + + + S+ ++G D+I++NPPY+ ++ +++ R L Sbjct: 147 KNTKKLKLERFVEIIHSNLLKCIKGKLDIIITNPPYLNKEELEIKN-KIKKEPSRALLGF 205 Query: 199 GIDGLSHYRTIADGVSRHLNKDGLCSVE 226 G DGL+ R I LN +GL +E Sbjct: 206 GKDGLNISRKILSQAKEKLNPNGLIIIE 233 >gi|160942863|ref|ZP_02090102.1| hypothetical protein FAEPRAM212_00339 [Faecalibacterium prausnitzii M21/2] gi|158445764|gb|EDP22767.1| hypothetical protein FAEPRAM212_00339 [Faecalibacterium prausnitzii M21/2] Length = 323 Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 73/277 (26%), Positives = 112/277 (40%), Gaps = 47/277 (16%) Query: 27 DSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL 86 D L Q L R E + + G F + L + PR +TE++ +A Sbjct: 47 DRPLTAEQAAALEVLCTRRAAREPLQYLCGSWSFLDFELAVGPGVLCPRADTEVVAQAA- 105 Query: 87 AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA----- 141 A +L I R+LDL GTG + L + + P + V+ S A + NA Sbjct: 106 AETLAGIA---APRVLDLCAGTGCLGLGVKRFCPAAQVTCVEKSPAAFVYLEKNARCALT 162 Query: 142 ----VTNGVSE----------RFD-------------------TLQSD----WFSSVEGL 164 T V E FD +Q+D W + EG Sbjct: 163 GQGRQTENVLEPSALEQEDAPTFDWGPALNALRASKKPAYAVQPVQADLFTYWETLPEGQ 222 Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224 ++IVSNPPY+ + ++ L EV +P ++L+ G DGL YR +A L G Sbjct: 223 LELIVSNPPYLTAAEMEQLQPEVAQ-EPAMALEAGEDGLVFYRALAQHYKNALCPGGALV 281 Query: 225 VEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 +EIG+ Q+ V + + +D+GGNDR ++ Sbjct: 282 LEIGWQQREAVTALLAENGWADIRCIQDFGGNDRCVI 318 >gi|187477917|ref|YP_785941.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Bordetella avium 197N] gi|115422503|emb|CAJ49028.1| putative adenine-specific methylase [Bordetella avium 197N] Length = 296 Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 69/222 (31%), Positives = 107/222 (48%), Gaps = 20/222 (9%) Query: 46 LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLG 105 L HE+ R G R + + R+ + PR L+D LA + E V R LD+ Sbjct: 89 LTHEAWLR--GHRFYVDQRVIV------PRSPIAELLDQGLAPWV--AEPESVGRALDMC 138 Query: 106 TGTGAVCLALLKES--PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE- 162 TG+G CLA+L P+ + VDIS AL++A+ N + +R +S+ F + Sbjct: 139 TGSG--CLAILAALAFPYAEVDAVDISPDALDVAQRNVDEYRLQDRLRLHRSNLFDDLPA 196 Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL 222 +DVIV NPPY+ S + L E R +P ++L GG DG+ R I R+L+ G+ Sbjct: 197 AAYDVIVCNPPYVNSQSMSELPAEYR-AEPALALAGGADGMDLVRRILQAAPRYLSPQGV 255 Query: 223 CSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 +EIG+ + E ++L +D++LL R Sbjct: 256 LVLEIGHERDHFEAAFPELEPIWL----DTEDASDQILLLTR 293 >gi|153842021|ref|ZP_01993463.1| protein methyltransferase HemK (Protein-glutamine N-methyltransferase hemK) (Protein-(glutamine-N5) MTase hemK) [Vibrio parahaemolyticus AQ3810] gi|149745421|gb|EDM56672.1| protein methyltransferase HemK (Protein-glutamine N-methyltransferase hemK) (Protein-(glutamine-N5) MTase hemK) [Vibrio parahaemolyticus AQ3810] Length = 154 Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 58/153 (37%), Positives = 80/153 (52%), Gaps = 6/153 (3%) Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSV-EGL-FDVIVS 170 AL E P + +GVD+ +A E+A+ NA + FD Q WF + EG F +IVS Sbjct: 1 ALASELPNRQVMGVDLKQEAKELAEYNAAQLNIKNVTFD--QGSWFEPIAEGTKFALIVS 58 Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230 NPPYI+ +VR F+P+ +L +GL+ R I+D ++L + G + E GY+ Sbjct: 59 NPPYIDEKDPHLSQGDVR-FEPKSALVADENGLADIRHISDLARQYLEEGGWLAFEHGYD 117 Query: 231 QKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFC 263 Q V I V KDYGGNDRV L C Sbjct: 118 QGEAVREIMSGFGYQQVVTEKDYGGNDRVTLGC 150 >gi|255318967|ref|ZP_05360192.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Acinetobacter radioresistens SK82] gi|262378297|ref|ZP_06071454.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Acinetobacter radioresistens SH164] gi|255303984|gb|EET83176.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Acinetobacter radioresistens SK82] gi|262299582|gb|EEY87494.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Acinetobacter radioresistens SH164] Length = 336 Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 46/131 (35%), Positives = 74/131 (56%), Gaps = 3/131 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 RILD+ TG+G + +AL P + DIS +ALE+A N + + + ++SD FS Sbjct: 159 RILDMCTGSGCIAIALAYAFPEAEVDATDISKEALEVAAINTEHHNMQYQVALMESDLFS 218 Query: 160 SV--EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217 + E +D+IVSNPPY+++ + L E +P ++L G DGL R + + +L Sbjct: 219 KIPAENQYDLIVSNPPYVDAEDMADLPEEFL-HEPELALAAGQDGLDLVRKMLSQAADYL 277 Query: 218 NKDGLCSVEIG 228 +DGL +E+G Sbjct: 278 TEDGLIVIEVG 288 >gi|325922322|ref|ZP_08184099.1| (protein release factor)-glutamine N5-methyltransferase [Xanthomonas gardneri ATCC 19865] gi|325547177|gb|EGD18254.1| (protein release factor)-glutamine N5-methyltransferase [Xanthomonas gardneri ATCC 19865] Length = 286 Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 69/221 (31%), Positives = 104/221 (47%), Gaps = 7/221 (3%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101 + R E + + G R F+ + L +S+ T PR +TE LV+ +L R + Sbjct: 64 VQRRQAGEPVAYLTGTRGFWTLDLAVSTATLIPRADTEALVE----LALERFDNMQGRCA 119 Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 DLGTG+GA+ LA+ E P + + D S AL +A+ NA + + + WF+ + Sbjct: 120 ADLGTGSGAIALAIASERPHAQVIATDASAAALAVAQQNASRHQL-RNVECRLGYWFAPL 178 Query: 162 EG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220 G FD+I SNPPYI + ++R +P +L G DGL R I HL Sbjct: 179 AGERFDLIASNPPYIAAHDPHLREGDLR-HEPASALASGPDGLDDIRLIVADAPMHLLPG 237 Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 G +E G++Q V + +R V +D DRV L Sbjct: 238 GWLLLEHGWDQGTAVADLLRARGFEAVATHQDLEQRDRVTL 278 >gi|78048434|ref|YP_364609.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|325928891|ref|ZP_08190054.1| (LSU ribosomal protein L3P)-glutamine N5-methyltransferase [Xanthomonas perforans 91-118] gi|78036864|emb|CAJ24557.1| putative HemK-family S-adenosyl-methionine-dependent methyltransferase [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|325540752|gb|EGD12331.1| (LSU ribosomal protein L3P)-glutamine N5-methyltransferase [Xanthomonas perforans 91-118] Length = 308 Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 53/160 (33%), Positives = 85/160 (53%), Gaps = 6/160 (3%) Query: 74 PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133 PR L+++ P + R+V R LDL TG+G + +A+ +P + GVDIS A Sbjct: 109 PRSPIAELIEAGFE---PWLGGREVTRALDLCTGSGCIAIAMGHYNPQWDVDGVDISDDA 165 Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDP 192 L +A N ++ L+SD F+ + G +D+IV+NPPY+ + D L E ++P Sbjct: 166 LALAAENKARLH-ADNVTLLKSDLFNGLGGRQYDLIVTNPPYVTNEETDALPQEY-SYEP 223 Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232 + L G DGL I +HL++DGL E+G +++ Sbjct: 224 ELGLRAGDDGLDLVLKILRDAPQHLSEDGLLICEVGESEQ 263 >gi|300727428|ref|ZP_07060837.1| modification methylase, HemK family [Prevotella bryantii B14] gi|299775308|gb|EFI71907.1| modification methylase, HemK family [Prevotella bryantii B14] Length = 275 Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 60/188 (31%), Positives = 86/188 (45%), Gaps = 8/188 (4%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101 I R K E + +LG DFY + PRPET L+D +P++ ++ I Sbjct: 58 IQRIEKGEPVQYVLGIADFYGRTFHVEPGVLIPRPETAELLDY-----IPKVNQKQT--I 110 Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 LD+GTG+G + + E + DIS KAL+IAK NA + F + Sbjct: 111 LDIGTGSGCIAITASLEHTQAEVSAWDISPKALQIAKDNAQRLNATVDFHLQDALNAPDH 170 Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL-DGGIDGLSHYRTIADGVSRHLNKD 220 + +DVI+SNPPYI + V D++P ++L D L Y IA R L Sbjct: 171 QSCWDVILSNPPYIMDKERQNMEKNVLDYEPELALFVPDQDPLKFYTAIARYSVRALKPK 230 Query: 221 GLCSVEIG 228 G+ EI Sbjct: 231 GILLFEIN 238 >gi|134094545|ref|YP_001099620.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Herminiimonas arsenicoxydans] gi|133738448|emb|CAL61493.1| Modification methylase HemK [Herminiimonas arsenicoxydans] Length = 296 Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 56/173 (32%), Positives = 86/173 (49%), Gaps = 7/173 (4%) Query: 91 PRIEKRD-VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 P + D + IL+L TG+G + + L P + VDIS AL +A+ N + +R Sbjct: 122 PWVSNPDKITNILELCTGSGCLPIMLADAFPNAQVDAVDISADALAVARRNVDEYELQDR 181 Query: 150 FDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208 ++SD ++ V E +D+I++NPPY+ S + L E +P I+L GG DG+ R Sbjct: 182 ITLIESDLYTHVPENKYDLIITNPPYVNSTSMGKLPPEYLR-EPHIALAGGDDGMDLVRK 240 Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 I G + L +GL VEIG N++ F L + G+D V L Sbjct: 241 IVAGAGKRLTPNGLLMVEIG-NERAYAEAAFPKLNLTWLTT---SAGDDMVFL 289 >gi|289669402|ref|ZP_06490477.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 308 Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 53/160 (33%), Positives = 85/160 (53%), Gaps = 6/160 (3%) Query: 74 PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133 PR L+++ P + R+V R LDL TG+G + +A+ +P + GVDIS A Sbjct: 109 PRSPIAELIEAGFE---PWLGGREVTRALDLCTGSGCIAIAMGHYNPQWDVDGVDISDDA 165 Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDP 192 L +A N ++ L+SD F+ + G +D+IV+NPPY+ + D L E ++P Sbjct: 166 LALAAENKARLH-ADNVSLLKSDLFTGLGGRQYDLIVTNPPYVTNDETDALPQEY-SYEP 223 Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232 + L G DGL I +HL++DGL E+G +++ Sbjct: 224 ELGLRAGDDGLDLVLKILRDAPQHLSEDGLLICEVGESEQ 263 >gi|332668240|ref|YP_004451028.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Haliscomenobacter hydrossis DSM 1100] gi|332337054|gb|AEE54155.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Haliscomenobacter hydrossis DSM 1100] Length = 280 Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 66/219 (30%), Positives = 109/219 (49%), Gaps = 6/219 (2%) Query: 46 LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLG 105 L + + ILG DFY ++ + PRPETE LV+ L +++ +LD+G Sbjct: 60 LAGQPLQYILGQADFYGLKFKVDPRVLIPRPETEELVEWVLETIKTHYPQQNP-SVLDIG 118 Query: 106 TGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVE 162 TG+G + + + K++P G+D+S AL +A+ NA N V ++ D L + ++S+ Sbjct: 119 TGSGCIPITIAKKTPRATVWGLDVSAAALALAEENAHLNQVEVQWQEQDILNQEAWTSL- 177 Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL-DGGIDGLSHYRTIADGVSRHLNKDG 221 +FD+I+SNPPYI + +V + +P ++L D L YR+IA HL+ G Sbjct: 178 PIFDLIISNPPYIPQREQVLMPAQVSNHEPHLALFVPDEDPLLFYRSIAAFAQIHLHPTG 237 Query: 222 LCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 E ++V ++ E V +D G R L Sbjct: 238 HLFFECNEYNALEVKQLLEEMGWSDVLLKEDLSGKLRHL 276 >gi|312149707|gb|ADQ29778.1| protoporphyrinogen oxidase, putative [Borrelia burgdorferi N40] Length = 286 Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 55/183 (30%), Positives = 95/183 (51%), Gaps = 20/183 (10%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110 IH IL ++F + +L+ PR +TE LV+ AL +I++ +ILDL G+G Sbjct: 64 IHYILQKKEFMGIEFSLNRHVLIPRFDTECLVEEALI----QIQQNGFKKILDLCCGSGC 119 Query: 111 VCLALLKESPFF---KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDV 167 + L++ ++ K + DIS KAL+I + N + + + + S+ ++G D+ Sbjct: 120 IGLSI----AYYIRKKVILSDISTKALQIVEKNTKKLKLEKFVEIIHSNLLKCIKGKLDI 175 Query: 168 IVSNPPYIESVIVDCLGLEVRD---FDPRISLDG-GIDGLSHYRTIADGVSRHLNKDGLC 223 I++NPPY+ LE+++ +P +L G G DGL+ R I + LN +GL Sbjct: 176 IITNPPYLNKE-----ELEIKNKIKKEPTKALLGFGKDGLNISRKILNQAKEKLNPNGLI 230 Query: 224 SVE 226 +E Sbjct: 231 IIE 233 >gi|71736054|ref|YP_274042.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Pseudomonas syringae pv. phaseolicola 1448A] gi|71556607|gb|AAZ35818.1| modification methylase, HemK family [Pseudomonas syringae pv. phaseolicola 1448A] gi|320323461|gb|EFW79546.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Pseudomonas syringae pv. glycinea str. B076] gi|320329496|gb|EFW85488.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Pseudomonas syringae pv. glycinea str. race 4] gi|330879875|gb|EGH14024.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Pseudomonas syringae pv. glycinea str. race 4] Length = 302 Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 51/140 (36%), Positives = 80/140 (57%), Gaps = 3/140 (2%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 ILDL TG+G + +A + P + D+S ALE+A N +G+ +R T+Q D F Sbjct: 129 ILDLCTGSGCIGIACAEVFPEAEVALADLSYDALEVANQNIERHGMEDRVYTVQGDGFDG 188 Query: 161 VEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 + G FD+IVSNPPY+++ + E + +P ++L G DGL+ R + + HLN+ Sbjct: 189 LPGQRFDLIVSNPPYVDAEDFADMPDEYQ-HEPELALACGSDGLNLVRRMLAQAADHLNE 247 Query: 220 DGLCSVEIGYNQKVDVVRIF 239 GL VE+G N +V V ++ Sbjct: 248 KGLLIVEVG-NSQVHVQALY 266 >gi|325921318|ref|ZP_08183177.1| (LSU ribosomal protein L3P)-glutamine N5-methyltransferase [Xanthomonas gardneri ATCC 19865] gi|325548203|gb|EGD19198.1| (LSU ribosomal protein L3P)-glutamine N5-methyltransferase [Xanthomonas gardneri ATCC 19865] Length = 308 Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 53/160 (33%), Positives = 85/160 (53%), Gaps = 6/160 (3%) Query: 74 PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133 PR L+++ P + R+V R LDL TG+G + +A+ +P + GVDIS A Sbjct: 109 PRSPIAELIEAGFE---PWLGGREVTRALDLCTGSGCIAIAMGHYNPQWDVDGVDISDDA 165 Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDP 192 L +A N ++ L+SD F+ + G +D+IV+NPPY+ + D L E ++P Sbjct: 166 LALAAENKARLH-ADNVTLLKSDLFTGLGGRQYDLIVTNPPYVTNDETDALPQEY-SYEP 223 Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232 + L G DGL I +HL++DGL E+G +++ Sbjct: 224 ELGLRAGDDGLDLVLKILRDAPQHLSEDGLLICEVGESEQ 263 >gi|224534065|ref|ZP_03674648.1| putative protoporphyrinogen oxidase [Borrelia burgdorferi CA-11.2a] gi|224512764|gb|EEF83132.1| putative protoporphyrinogen oxidase [Borrelia burgdorferi CA-11.2a] Length = 286 Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 55/183 (30%), Positives = 95/183 (51%), Gaps = 20/183 (10%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110 IH IL ++F + +L+ PR +TE LV+ AL +I++ +ILDL G+G Sbjct: 64 IHYILQKKEFMGIEFSLNRHVLIPRFDTECLVEEALI----QIQQNGFKKILDLCCGSGC 119 Query: 111 VCLALLKESPFF---KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDV 167 + L++ ++ K + DIS KAL+I + N + + + + S+ ++G D+ Sbjct: 120 IGLSI----AYYIRKKVILSDISTKALQIVEKNTKKLKLEKFVEIIHSNLLKCIKGKLDI 175 Query: 168 IVSNPPYIESVIVDCLGLEVRD---FDPRISLDG-GIDGLSHYRTIADGVSRHLNKDGLC 223 I++NPPY+ LE+++ +P +L G G DGL+ R I + LN +GL Sbjct: 176 IITNPPYLNKE-----ELEIKNKIKKEPTKALLGFGKDGLNISRKILNQAKEKLNPNGLI 230 Query: 224 SVE 226 +E Sbjct: 231 IIE 233 >gi|21553723|gb|AAM62816.1| unknown [Arabidopsis thaliana] Length = 377 Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 56/194 (28%), Positives = 90/194 (46%), Gaps = 5/194 (2%) Query: 47 KHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGT 106 K H ++G + ++ L + PRPETEL+VD + R E + +LGT Sbjct: 151 KRRPFHYVVGCEHWRDLVLCVEEGVLIPRPETELIVDMVEEL-VTRDEWFKKGILANLGT 209 Query: 107 GTGAVCLALLKE-SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---E 162 G+GA+ + + K + + D+S A+ +A N + + + WF + E Sbjct: 210 GSGAIAIGIAKVLGSRGRVIATDLSPVAIAVAGHNVHRYSLEGMIEVREGSWFEPLKDLE 269 Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL 222 G +VSNPPYI S + L EV +P+++LDGGIDG + G SR L G Sbjct: 270 GKLVGLVSNPPYIPSDDIPGLQAEVGRHEPKLALDGGIDGTDSLFHLCHGASRMLQPGGF 329 Query: 223 CSVEIGYNQKVDVV 236 E ++ ++ Sbjct: 330 FVFETNGEKQSKMI 343 >gi|47229807|emb|CAG07003.1| unnamed protein product [Tetraodon nigroviridis] Length = 219 Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 56/163 (34%), Positives = 83/163 (50%), Gaps = 16/163 (9%) Query: 59 DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV------RILDLGTGTGAVC 112 DF +V L + F PRPETE LV+ L +E R V L++G G+GA+ Sbjct: 11 DFRDVTLKMRPPVFIPRPETEELVELVLG----DLESRSWVGADTQQTCLEVGCGSGAIS 66 Query: 113 LALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDV----- 167 L+LL+ P + + VD S A+E+ NA G+ +R D + E L + Sbjct: 67 LSLLRSRPQLQVLAVDQSRDAVELTAENAGRLGLEDRLQVHHLDVMKAGETLLSLCGSVS 126 Query: 168 -IVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209 +VSNPPY+ S ++ L E+ F+ +LDGG DGL+ + I Sbjct: 127 ALVSNPPYLFSEDMNSLEPEISRFEDHGALDGGEDGLNTIKQI 169 >gi|89093217|ref|ZP_01166167.1| Modification methylase HemK [Oceanospirillum sp. MED92] gi|89082513|gb|EAR61735.1| Modification methylase HemK [Oceanospirillum sp. MED92] Length = 309 Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 64/236 (27%), Positives = 118/236 (50%), Gaps = 9/236 (3%) Query: 22 VIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELL 81 ++D LD++ + L+ R+++ + + I G F + + PR L Sbjct: 64 AVLDGRLTLDEKTKV-LSYIQQRAVERKPLPYITGESWFCQLPFYVDERVLIPRSPIAEL 122 Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 +++ +P + + V R+LDL TG+G + +A + DIS A+++A N Sbjct: 123 IEAEF---VPWLREGPVERVLDLCTGSGCIGIACAYAFAEAEVDLADISKDAIDVAHMNI 179 Query: 142 VTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200 + ++ER ++SD F +++G +D+IVSNPPY+++ + + E D +P ++L G Sbjct: 180 EKHEMAERVHAIESDLFCNLKGKKYDLIVSNPPYVDADDLASMPEEY-DHEPELALGSGP 238 Query: 201 DGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGN 256 DGL R I + +L DGL VE+G N +V ++ F + + + GGN Sbjct: 239 DGLDITRRILAEANDYLTDDGLLVVEVG-NSEVHMMEQFPELPIVWIEFQR--GGN 291 >gi|227546610|ref|ZP_03976659.1| HemK family modification methylase [Bifidobacterium longum subsp. infantis ATCC 55813] gi|227212927|gb|EEI80806.1| HemK family modification methylase [Bifidobacterium longum subsp. infantis ATCC 55813] Length = 302 Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 59/232 (25%), Positives = 109/232 (46%), Gaps = 22/232 (9%) Query: 44 RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR--I 101 R K E + I G F + L + F PRPETE +V + L + + K ++ + Sbjct: 74 RRAKREPLQYITGHAPFRYLDLKVGPGVFIPRPETETVVQAGLDW----LTKNGMIHPCV 129 Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW---- 157 +DL G+GA+ L+++ E P + V++S E + N + ++++ ++ S++ Sbjct: 130 VDLCAGSGAIGLSVVSEVPGSQVWAVELSPNTAEWTRRN--LSETAKKYPSIASNYHLEI 187 Query: 158 --------FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG-IDGLSHYRT 208 + ++G D++++NPPY+ + EVRD+DP ++L GG +DG Sbjct: 188 ADATSFATLAQLDGTVDIVITNPPYVPQTDIPEQP-EVRDWDPELALYGGSMDGTLIPER 246 Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 I + R L G+ +E Q +V + + +D+ G DR L Sbjct: 247 IIERACRLLKPGGVLVMEHDVTQGDRLVAFARATGFAAASTGQDWTGRDRYL 298 >gi|227501695|ref|ZP_03931744.1| HemK family methytransferase [Corynebacterium accolens ATCC 49725] gi|227077720|gb|EEI15683.1| HemK family methytransferase [Corynebacterium accolens ATCC 49725] Length = 277 Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 63/213 (29%), Positives = 101/213 (47%), Gaps = 22/213 (10%) Query: 44 RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103 R + E + +LG F + L + F PRPETE++ D A + R++D Sbjct: 62 RREQREPLQYVLGTAWFGPLELKVGPGVFIPRPETEVMADWA-------VHHAPGPRMVD 114 Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSDWFSSVE 162 L +G+GA+ L L P + V++S ALE ++N + GV + D S + Sbjct: 115 LCSGSGALALYLQHYVPQAEVKAVELSDAALEFTRANTLRTGVEVVQADATDSQALADWN 174 Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL 222 G D++VSNPPY+ L EV DP +++ GG DG+ R + ++R L G+ Sbjct: 175 GTVDLVVSNPPYVPE--DPNLQPEVY-HDPHVAVFGGDDGMGVIRGLIPTIARLLRPGGV 231 Query: 223 CSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGG 255 ++E + D VR +A +D+GG Sbjct: 232 MAIEHD-DTTGDAVR----------DAVRDHGG 253 >gi|160903109|ref|YP_001568690.1| HemK family modification methylase [Petrotoga mobilis SJ95] gi|160360753|gb|ABX32367.1| modification methylase, HemK family [Petrotoga mobilis SJ95] Length = 268 Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 62/183 (33%), Positives = 97/183 (53%), Gaps = 15/183 (8%) Query: 33 RQRFFLTNAIVRSLKH-ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLP 91 Q F+ +V+ LK I I F ++ + PR ETE LV LA +L Sbjct: 46 EQTFYF---LVKHLKEGYPIEYITKKVSFLGNEFFVNENVLIPRIETEDLV--ILAINL- 99 Query: 92 RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF- 150 I+ +D+ ++D+GTG+G + +++ K+ P K DIS A+++A+ NA GV+ F Sbjct: 100 -IKNKDIKNVIDIGTGSGVIAISIKKQLPKIKVRASDISEDAIKVAQYNAEKLGVNIGFK 158 Query: 151 --DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208 D L D F +I+SNPPY+E+ V+ ++PRISLDGG DG S ++ Sbjct: 159 IGDCL--DPFLEEIDEVQLIISNPPYVETSFVE--KNRFLSYEPRISLDGGYDGQSFFKK 214 Query: 209 IAD 211 I++ Sbjct: 215 ISN 217 >gi|289663180|ref|ZP_06484761.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 308 Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 53/160 (33%), Positives = 85/160 (53%), Gaps = 6/160 (3%) Query: 74 PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133 PR L+++ P + R+V R LDL TG+G + +A+ +P + GVDIS A Sbjct: 109 PRSPIAELIEAGFE---PWLGGREVTRALDLCTGSGCIAIAMGHYNPQWDVDGVDISDDA 165 Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDP 192 L +A N ++ L+SD F+ + G +D+IV+NPPY+ + D L E ++P Sbjct: 166 LALAAENKARLH-ADNVSLLKSDLFTGLGGRQYDLIVTNPPYVTNDETDALPHEY-SYEP 223 Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232 + L G DGL I +HL++DGL E+G +++ Sbjct: 224 ELGLRAGDDGLDLVLKILRDAPQHLSEDGLLICEVGESEQ 263 >gi|229591758|ref|YP_002873877.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Pseudomonas fluorescens SBW25] gi|229363624|emb|CAY50950.1| conserved hypothetical protein [Pseudomonas fluorescens SBW25] Length = 302 Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 54/142 (38%), Positives = 80/142 (56%), Gaps = 3/142 (2%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 RILDL TG+G + +A E + V D+S +ALE+A N +GV ER T+Q D F Sbjct: 127 ARILDLCTGSGCIGIACAYEFQDAEVVLGDLSFEALEVANQNIERHGVDERVYTVQGDGF 186 Query: 159 SSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217 + G FD+IVSNPPY+++ + E + +P + L G DGL+ R + + HL Sbjct: 187 DGLPGQRFDLIVSNPPYVDAEDFADMPDEYQ-HEPELGLACGDDGLNLVRRMLAEAADHL 245 Query: 218 NKDGLCSVEIGYNQKVDVVRIF 239 + GL VE+G N +V V ++ Sbjct: 246 TEKGLLIVEVG-NSQVHVEALY 266 >gi|325915515|ref|ZP_08177826.1| (LSU ribosomal protein L3P)-glutamine N5-methyltransferase [Xanthomonas vesicatoria ATCC 35937] gi|325538231|gb|EGD09916.1| (LSU ribosomal protein L3P)-glutamine N5-methyltransferase [Xanthomonas vesicatoria ATCC 35937] Length = 308 Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 53/160 (33%), Positives = 85/160 (53%), Gaps = 6/160 (3%) Query: 74 PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133 PR L+++ P + R+V R LDL TG+G + +A+ +P + GVDIS A Sbjct: 109 PRSPIAELIEAGFE---PWLGGREVTRALDLCTGSGCIAIAMGHYNPQWDVDGVDISDDA 165 Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDP 192 L +A N ++ L+SD F+ + G +D+IV+NPPY+ + D L E ++P Sbjct: 166 LALAAENKARLH-ADNVTLLKSDLFTGLGGRQYDLIVTNPPYVTNDETDALPQEY-SYEP 223 Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232 + L G DGL I +HL++DGL E+G +++ Sbjct: 224 ELGLRAGDDGLDLVLKILRDAPQHLSEDGLLICEVGESEQ 263 >gi|239621641|ref|ZP_04664672.1| conserved hypothetical protein [Bifidobacterium longum subsp. infantis CCUG 52486] gi|239515516|gb|EEQ55383.1| conserved hypothetical protein [Bifidobacterium longum subsp. infantis CCUG 52486] Length = 302 Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 59/232 (25%), Positives = 109/232 (46%), Gaps = 22/232 (9%) Query: 44 RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR--I 101 R K E + I G F + L + F PRPETE +V + L + + K ++ + Sbjct: 74 RRAKREPLQYITGHAPFRYLDLKVGPGVFIPRPETETVVQAGLDW----LTKNGMIHPCV 129 Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW---- 157 +DL G+GA+ L+++ E P + V++S E + N + ++++ ++ S++ Sbjct: 130 VDLCAGSGAIGLSVVSEVPGSQVWAVELSPNTAEWTRRN--LSETAKKYPSIASNYHLEI 187 Query: 158 --------FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG-IDGLSHYRT 208 + ++G D++++NPPY+ + EVRD+DP ++L GG +DG Sbjct: 188 ADATSFATLAQLDGTVDIVITNPPYVPQTDIPEQP-EVRDWDPELALYGGSMDGTLIPER 246 Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 I + R L G+ +E Q +V + + +D+ G DR L Sbjct: 247 IIERACRLLKPGGVLVMEHDVTQGDRLVAFARATGFAAASTGQDWTGRDRYL 298 >gi|213691479|ref|YP_002322065.1| modification methylase, HemK family [Bifidobacterium longum subsp. infantis ATCC 15697] gi|213522940|gb|ACJ51687.1| modification methylase, HemK family [Bifidobacterium longum subsp. infantis ATCC 15697] gi|320457552|dbj|BAJ68173.1| putative methylase [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 294 Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 62/248 (25%), Positives = 115/248 (46%), Gaps = 23/248 (9%) Query: 30 LDDRQRFF-LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAF 88 L +RF + + R K E + I G F + L + F PRPETE +V + L + Sbjct: 51 LGTAERFARFQSMLARRAKREPLQYITGHAPFRYLDLKVGPGVFIPRPETETVVQAGLDW 110 Query: 89 SLPRIEKRDVVR--ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146 + + ++ ++DL G+GA+ L+++ E P + V++S E + N + Sbjct: 111 ----LTRNGMIHPCVVDLCAGSGAIGLSVVSEVPGSQVWAVELSPNTAEWTRRN--LSET 164 Query: 147 SERFDTLQSDW------------FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194 ++++ ++ S++ + ++G D++++NPPY+ + EVRD+DP + Sbjct: 165 AKKYPSIASNYHLEIADATSFATLAQLDGTVDIVITNPPYVPQTDIPEQP-EVRDWDPEL 223 Query: 195 SLDGG-IDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDY 253 +L GG DG I + R L G+ +E Q +V ++ + KD+ Sbjct: 224 ALYGGSADGTLIPERIIERAYRLLKPGGVLVMEHDLTQGERLVAYAKAIGFTAAHTGKDW 283 Query: 254 GGNDRVLL 261 G DR L Sbjct: 284 TGRDRYLF 291 >gi|23466258|ref|NP_696861.1| methylase protein [Bifidobacterium longum NCC2705] gi|46190986|ref|ZP_00120803.2| COG2890: Methylase of polypeptide chain release factors [Bifidobacterium longum DJO10A] gi|189440752|ref|YP_001955833.1| methylase of polypeptide chain release factor [Bifidobacterium longum DJO10A] gi|312134005|ref|YP_004001344.1| hemk [Bifidobacterium longum subsp. longum BBMN68] gi|317482078|ref|ZP_07941102.1| protein-(glutamine-N5) methyltransferase [Bifidobacterium sp. 12_1_47BFAA] gi|23327006|gb|AAN25497.1| possible methylase protein [Bifidobacterium longum NCC2705] gi|189429187|gb|ACD99335.1| Methylase of polypeptide chain release factor [Bifidobacterium longum DJO10A] gi|311773308|gb|ADQ02796.1| HemK [Bifidobacterium longum subsp. longum BBMN68] gi|316916437|gb|EFV37835.1| protein-(glutamine-N5) methyltransferase [Bifidobacterium sp. 12_1_47BFAA] Length = 294 Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 59/232 (25%), Positives = 109/232 (46%), Gaps = 22/232 (9%) Query: 44 RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR--I 101 R K E + I G F + L + F PRPETE +V + L + + K ++ + Sbjct: 66 RRAKREPLQYITGHAPFRYLDLKVGPGVFIPRPETETVVQAGLDW----LTKNGMIHPCV 121 Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW---- 157 +DL G+GA+ L+++ E P + V++S E + N + ++++ ++ S++ Sbjct: 122 VDLCAGSGAIGLSVVSEVPGSQVWAVELSPNTAEWTRRN--LSETAKKYPSIASNYHLEI 179 Query: 158 --------FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG-IDGLSHYRT 208 + ++G D++++NPPY+ + EVRD+DP ++L GG +DG Sbjct: 180 ADATSFATLAQLDGTVDIVITNPPYVPQTDIPEQP-EVRDWDPELALYGGSMDGTLIPER 238 Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 I + R L G+ +E Q +V + + +D+ G DR L Sbjct: 239 IIERACRLLKPGGVLVMEHDVTQGDRLVAFARATGFAAASTGQDWTGRDRYL 290 >gi|322689792|ref|YP_004209526.1| methylase [Bifidobacterium longum subsp. infantis 157F] gi|320461128|dbj|BAJ71748.1| putative methylase [Bifidobacterium longum subsp. infantis 157F] Length = 294 Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 59/232 (25%), Positives = 109/232 (46%), Gaps = 22/232 (9%) Query: 44 RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR--I 101 R K E + I G F + L + F PRPETE +V + L + + K ++ + Sbjct: 66 RRAKREPLQYITGHAPFRYLDLKVGPGVFIPRPETETVVQAGLDW----LTKNGMIHPCV 121 Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW---- 157 +DL G+GA+ L+++ E P + V++S E + N + ++++ ++ S++ Sbjct: 122 VDLCAGSGAIGLSVVSEVPGSQVWAVELSPNTAEWTRRN--LSETAKKYPSIASNYHLEI 179 Query: 158 --------FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG-IDGLSHYRT 208 + ++G D++++NPPY+ + EVRD+DP ++L GG +DG Sbjct: 180 ADATSFATLAQLDGTVDIVITNPPYVPQTDIPEQP-EVRDWDPELALYGGSMDGTLIPER 238 Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 I + R L G+ +E Q +V + + +D+ G DR L Sbjct: 239 IIERACRLLKPGGVLVMEHDVTQGDRLVAFARATGFAAASTGQDWTGRDRYL 290 >gi|312962187|ref|ZP_07776679.1| modification methylase, HemK family [Pseudomonas fluorescens WH6] gi|311283524|gb|EFQ62113.1| modification methylase, HemK family [Pseudomonas fluorescens WH6] Length = 338 Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 63/196 (32%), Positives = 95/196 (48%), Gaps = 12/196 (6%) Query: 43 VRSLKHESIHR------ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR 96 V+ L H IH +LG F + + PR L+++ L + Sbjct: 105 VQRLLHRRIHERVPTAYLLGEAWFCGMSFIVDKRVLIPRSPIGELIENRFEPWL----AQ 160 Query: 97 DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 RILDL TG+G + +A E + V D+S +ALE+A N +G ER T+Q D Sbjct: 161 PPARILDLCTGSGCIGIACAYEFQDAEVVLGDLSFEALEVANQNIERHGADERVYTVQGD 220 Query: 157 WFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215 F + G FD+IVSNPPY+++ + E + +P + L G DGL+ R + + Sbjct: 221 GFGGLPGQRFDLIVSNPPYVDAEDFADMPDEYQH-EPELGLACGDDGLNLVRRMLAEAAD 279 Query: 216 HLNKDGLCSVEIGYNQ 231 HL + GL VE+G +Q Sbjct: 280 HLTEKGLLIVEVGNSQ 295 >gi|323343507|ref|ZP_08083734.1| protein-(glutamine-N5) methyltransferase [Prevotella oralis ATCC 33269] gi|323095326|gb|EFZ37900.1| protein-(glutamine-N5) methyltransferase [Prevotella oralis ATCC 33269] Length = 276 Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 72/255 (28%), Positives = 111/255 (43%), Gaps = 17/255 (6%) Query: 16 GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75 GLS VI + L L I R K E + ++G +F N +++ PR Sbjct: 32 GLSWADVICGKVTQLGAENALLLQQMIGRLAKGEPVQYVMGRAEFANRIFSVTQGVLIPR 91 Query: 76 PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135 PET L + E + +LD+G G+G + + L V DIS +AL Sbjct: 92 PETAELC------AWITHETPEDATVLDVGCGSGCIAVTLALNIHGAHVVAWDISDEALH 145 Query: 136 IAKSNAVTNGVSERFDTLQSDWF---SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDP 192 IA+SNA + R D ++ D + VE +DV+VSNPPYI + V D++P Sbjct: 146 IAESNA--QALHARVDIVRQDALIPPADVEK-WDVVVSNPPYICERERGAMARNVLDYEP 202 Query: 193 RISL---DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249 +L D D L YR IA+ ++ L + G E+ +V R+ + + + Sbjct: 203 DTALFVPDN--DPLLFYRAIAEYAAKALKRGGTLYFELNPLHADEVKRMLYEQHFAAIES 260 Query: 250 FKDYGGNDRVLLFCR 264 D G +R + R Sbjct: 261 RHDMFGKERFIKAIR 275 >gi|262368208|ref|ZP_06061537.1| protein-(glutamine-N5) methyltransferase [Acinetobacter johnsonii SH046] gi|262315886|gb|EEY96924.1| protein-(glutamine-N5) methyltransferase [Acinetobacter johnsonii SH046] Length = 336 Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 47/131 (35%), Positives = 74/131 (56%), Gaps = 3/131 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 RILD+ TG+G + +AL P + DIS +ALE+A+ N+ + + L+SD FS Sbjct: 159 RILDMCTGSGCIAIALAYAYPDAEVDATDISKEALEVAQINSEHHDKQYQVALLESDLFS 218 Query: 160 SV--EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217 + E +D+IVSNPPY+++ + L E +P ++L G DGL R + +L Sbjct: 219 KIPAENQYDLIVSNPPYVDAEDMADLPEEFH-HEPELALAAGQDGLDLVRKMLAQAPDYL 277 Query: 218 NKDGLCSVEIG 228 +DGL +E+G Sbjct: 278 TEDGLIVIEVG 288 >gi|15237618|ref|NP_201220.1| methylase family protein [Arabidopsis thaliana] gi|10176963|dbj|BAB10283.1| unnamed protein product [Arabidopsis thaliana] gi|15451004|gb|AAK96773.1| Unknown protein [Arabidopsis thaliana] gi|30725624|gb|AAP37834.1| At5g64156 [Arabidopsis thaliana] gi|332010464|gb|AED97847.1| RNA methyltransferase family protein [Arabidopsis thaliana] Length = 377 Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 59/186 (31%), Positives = 88/186 (47%), Gaps = 12/186 (6%) Query: 57 WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIE--KRDVVRILDLGTGTGAVCLA 114 WRD L + PRPETEL+VD + R E K+D+ DLGTG+GA+ + Sbjct: 164 WRDLV---LCVEEGVLIPRPETELIVDMVEEL-VTRDEWFKKDI--WADLGTGSGAIAIG 217 Query: 115 LLKE-SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS---VEGLFDVIVS 170 + K + + D+S A+ +A N + + + WF +EG +VS Sbjct: 218 IAKVLGSRGRVIATDLSPVAIAVAGHNVQRYSLEGMIEVREGSWFEPLKDLEGKLVGLVS 277 Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230 NPPYI S + L EV +P+++LDGGIDG + G SR L G E Sbjct: 278 NPPYIPSDDIPGLQAEVGRHEPKLALDGGIDGTDSLFHLCHGASRMLQPGGFFVFETNGE 337 Query: 231 QKVDVV 236 ++ ++ Sbjct: 338 KQSKMI 343 >gi|322691738|ref|YP_004221308.1| methylase [Bifidobacterium longum subsp. longum JCM 1217] gi|320456594|dbj|BAJ67216.1| putative methylase [Bifidobacterium longum subsp. longum JCM 1217] Length = 294 Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 59/232 (25%), Positives = 109/232 (46%), Gaps = 22/232 (9%) Query: 44 RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR--I 101 R K E + I G F + L + F PRPETE +V + L + + K ++ + Sbjct: 66 RRAKREPLQYITGHAPFRYLDLKVGPGVFIPRPETETVVQAGLDW----LTKNGMIHPCV 121 Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW---- 157 +DL G+GA+ L+++ E P + V++S E + N + ++++ ++ S++ Sbjct: 122 VDLCAGSGAIGLSVVSEVPGSQVWAVELSPNTAEWTRRN--LSETAKKYPSIASNYHLEI 179 Query: 158 --------FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG-IDGLSHYRT 208 + ++G D++++NPPY+ + EVRD+DP ++L GG +DG Sbjct: 180 ADATSFATLAQLDGTVDIVITNPPYVPQTDIPEQP-EVRDWDPELALYGGSMDGTLIPER 238 Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 I + R L G+ +E Q +V + + +D+ G DR L Sbjct: 239 IIERACRLLKPGGVLVMEHDVTQGDRLVAFASATGFAAASTGQDWTGRDRYL 290 >gi|170703465|ref|ZP_02894232.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Burkholderia ambifaria IOP40-10] gi|170131622|gb|EDT00183.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Burkholderia ambifaria IOP40-10] Length = 302 Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 58/178 (32%), Positives = 88/178 (49%), Gaps = 16/178 (8%) Query: 94 EKRDVVRILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVSERFD 151 + V +L+L TG+G CLA+L S F VD+S KALE+A+ N G+ ER Sbjct: 123 DPEQVGAVLELCTGSG--CLAILAASAFPNAEIDAVDLSDKALEVARINVSDYGLDERIT 180 Query: 152 TLQSDWFSSVEGL-------FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204 + D ++ + +DVI++NPPY+ + + L E R +P ++L GG DG+ Sbjct: 181 LHRGDLYAPLPAFRAEPDARYDVILTNPPYVNATSMAALPPEYR-HEPEMALAGGEDGMD 239 Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262 R I + L+ DG+ VEIG N++ V F +L G+D V L Sbjct: 240 IVRRIISEAHKWLHDDGVLVVEIG-NEREHVEAAFGGLEL---TWLPTSAGDDTVFLI 293 >gi|306835872|ref|ZP_07468867.1| protein-(glutamine-N5) methyltransferase [Corynebacterium accolens ATCC 49726] gi|304568237|gb|EFM43807.1| protein-(glutamine-N5) methyltransferase [Corynebacterium accolens ATCC 49726] Length = 277 Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 63/213 (29%), Positives = 102/213 (47%), Gaps = 22/213 (10%) Query: 44 RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103 R + E + +LG F + L + F PRPETE++ D A + R++D Sbjct: 62 RREQREPLQYVLGTAWFGPLDLKVGPGVFIPRPETEVMADWA-------VHHAPGPRMVD 114 Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSDWFSSVE 162 L +G+GA+ L L P + V++S AL+ ++N + GV + D S + Sbjct: 115 LCSGSGALALYLQHYVPQAEVKAVELSDAALDFTRANTLGTGVEVVQADATDSQTLADWN 174 Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL 222 G D++VSNPPY+ L EV DPR+++ GG DG+ R + ++R L G+ Sbjct: 175 GTVDLVVSNPPYVPE--DPNLQPEVY-HDPRVAVFGGDDGMGVIRGLIPTIARLLRPGGV 231 Query: 223 CSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGG 255 ++E + D VR +A +D+GG Sbjct: 232 MAIEHD-DTTGDAVR----------DAVRDHGG 253 >gi|290561725|gb|ADD38260.1| HemK methyltransferase family member 1 [Lepeophtheirus salmonis] Length = 305 Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 59/188 (31%), Positives = 96/188 (51%), Gaps = 20/188 (10%) Query: 46 LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLG 105 L + I+ F + L + F PRPETE ++D A+AF+ P+ +L++G Sbjct: 75 LSRMPLQYIIKEWPFRGLNLQMRPPVFIPRPETEKIIDLAIAFN-PK-------SVLEIG 126 Query: 106 TGTGAVCLALLKESPFF-KGVGVDISCKALEIAKSNA---VTNGVSERFDTLQSDWFS-- 159 G+GA+ + LL E P + V VD S A+++ K NA + N + + L + S Sbjct: 127 CGSGAIAIGLLSECPSIQRCVAVDRSKMAVDLTKDNAKRLLGNQNQSKLEVLCNPINSGG 186 Query: 160 ----SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215 +EG FD+++SNPPYI + + E+ ++ +LDGG DGL ++I +S+ Sbjct: 187 TFEYPIEGPFDLVISNPPYILRKDLHNVEPEIGLYEDLRALDGGPDGLDVIKSIFSWISQ 246 Query: 216 H--LNKDG 221 LN D Sbjct: 247 EGVLNSDS 254 >gi|294650372|ref|ZP_06727739.1| adenine-specific methylase [Acinetobacter haemolyticus ATCC 19194] gi|292823785|gb|EFF82621.1| adenine-specific methylase [Acinetobacter haemolyticus ATCC 19194] Length = 336 Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 50/143 (34%), Positives = 78/143 (54%), Gaps = 4/143 (2%) Query: 89 SLPRIEK-RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147 SLP K + RILD+ TG+G + +AL P + DIS +ALE+A N + Sbjct: 147 SLPENPKPKTPQRILDMCTGSGCIAIALAYAYPESEVDATDISKEALEVASINTEHHNKQ 206 Query: 148 ERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSH 205 + L+SD F+ + E +D+IVSNPPY+++ + L E +P ++L G DGL Sbjct: 207 YQVALLESDLFAKIPAENQYDLIVSNPPYVDAEDMADLPEEFL-HEPELALAAGQDGLDL 265 Query: 206 YRTIADGVSRHLNKDGLCSVEIG 228 R + + +L +DGL +E+G Sbjct: 266 VRKMLAQAADYLTEDGLIVIEVG 288 >gi|87122381|ref|ZP_01078262.1| probable DNA methylase [Marinomonas sp. MED121] gi|86162356|gb|EAQ63640.1| probable DNA methylase [Marinomonas sp. MED121] Length = 301 Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 67/230 (29%), Positives = 108/230 (46%), Gaps = 17/230 (7%) Query: 32 DRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR-PETELLVDSALAFSL 90 D ++ LT R K + +LG F + ++ DT PR P LL D + Sbjct: 69 DEKKSILTMLNERISKRTPLPYLLGEAWFMGLPFKVTKDTLIPRSPIMALLKDEFQPWL- 127 Query: 91 PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS---CKALEIAKSNAVTNGVS 147 K+ + ILD+ TG+G CL + + F+ VDIS AL++A+ N + V Sbjct: 128 ----KQYPLNILDMCTGSG--CLGI-TAALIFEDAKVDISDISQAALDVARQNIEIHQVE 180 Query: 148 ERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206 E + +QSD F + + +D+I+ NPPY+++ LE +P ++L G DGL Sbjct: 181 ESVEAIQSDMFEKLLQRQYDLIICNPPYVDADDYQSAPLEFHR-EPELALTSGFDGLDFT 239 Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGN 256 R + + HL+ DG+ E+G N ++ + F V + GGN Sbjct: 240 RKFLNQAAEHLHDDGIIVYEVG-NSEIALQDAFPDVPFMWVEL--EQGGN 286 >gi|332216070|ref|XP_003257165.1| PREDICTED: hemK methyltransferase family member 1 isoform 1 [Nomascus leucogenys] gi|332216072|ref|XP_003257166.1| PREDICTED: hemK methyltransferase family member 1 isoform 2 [Nomascus leucogenys] gi|332216074|ref|XP_003257167.1| PREDICTED: hemK methyltransferase family member 1 isoform 3 [Nomascus leucogenys] Length = 338 Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 68/229 (29%), Positives = 103/229 (44%), Gaps = 12/229 (5%) Query: 44 RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPR---IEKRDVVR 100 R L+ + ILG DF + L + F PRPETE LV+ L R + Sbjct: 103 RRLQRMPVQYILGEWDFQGLSLRMVPPVFIPRPETEELVEWVLEEVAQRSHAVGSPGSPL 162 Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD---- 156 IL++G G+GA+ L+LL + P + + VD A+ + NA + +R + D Sbjct: 163 ILEVGCGSGAISLSLLSQLPQSRVIAVDKGEAAISLTHENAQRLRLQDRIWIIHLDMTSE 222 Query: 157 --WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214 W G D++VSNPPY+ ++ L E+R ++ +LDGG +G+ I Sbjct: 223 RSWTYLPWGPVDLVVSNPPYVFHQDMEQLAPEIRSYEDPAALDGGEEGMDIITHILALAP 282 Query: 215 RHLNKDGLCSVEIGYNQKVDVVRIFESRK---LFLVNAFKDYGGNDRVL 260 R L G +E+ V +SR L LV +D+ G R L Sbjct: 283 RLLKDSGSIFLEVDPRHPELVSSWLQSRPDLYLNLVAVRRDFCGRPRFL 331 >gi|75676706|ref|YP_319127.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Nitrobacter winogradskyi Nb-255] gi|74421576|gb|ABA05775.1| [LSU ribosomal protein L3P]-glutamine N5-methyltransferase [Nitrobacter winogradskyi Nb-255] Length = 340 Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 48/134 (35%), Positives = 72/134 (53%), Gaps = 6/134 (4%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVSERFDTLQS 155 + R+LDL TG+G CLA+L F D+S AL +A N +G+ +R Q Sbjct: 170 LTRVLDLCTGSG--CLAILAARAFPNATVDATDLSADALAVAARNVREHGLDDRIQLAQG 227 Query: 156 DWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214 D F++V G +D+I+SNPPY+++ + L E +PR++ DGG +G+ R I D Sbjct: 228 DLFAAVRGRRYDLIISNPPYVDAEGMAGLPRECL-VEPRMAFDGGTEGIDLVRRIIDRAE 286 Query: 215 RHLNKDGLCSVEIG 228 HL G E+G Sbjct: 287 THLAPGGGLLCEVG 300 >gi|114046986|ref|YP_737536.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Shewanella sp. MR-7] gi|113888428|gb|ABI42479.1| modification methylase, HemK family [Shewanella sp. MR-7] Length = 314 Score = 78.6 bits (192), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 61/176 (34%), Positives = 94/176 (53%), Gaps = 7/176 (3%) Query: 91 PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150 P + + V RILDL TG+G + +A E + +DIS AL++A+ N T GV +R Sbjct: 127 PWLYGKPVNRILDLCTGSGCIAIACAYEFDEAEVDALDISEDALDVAQINVETLGVMDRV 186 Query: 151 DTLQSDWFSSV-EG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208 +QSD FS++ EG +D+IVSNPPY++ + + E +P I L G DGL + Sbjct: 187 FPMQSDLFSAIPEGPQYDLIVSNPPYVDEEDIGDMPDEYH-HEPAIGLASGRDGLDLTKR 245 Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 I +++L G+ VE+G N V ++ F V+ ++GG D V + R Sbjct: 246 ILANAAQYLTPTGILVVEVG-NSMVHLMEQFPEVPFTWVSF--EHGG-DGVFVLTR 297 >gi|328947854|ref|YP_004365191.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Treponema succinifaciens DSM 2489] gi|328448178|gb|AEB13894.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Treponema succinifaciens DSM 2489] Length = 310 Score = 78.6 bits (192), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 73/266 (27%), Positives = 122/266 (45%), Gaps = 30/266 (11%) Query: 22 VIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELL 81 ++ ++ L + Q+ ++I + + I G ++F+ + + P+P+TELL Sbjct: 39 ILFHSETELSELQKNIFCSSIEKRKTGLPVAYITGIKEFFGSDFEVDKNVLIPKPDTELL 98 Query: 82 VDSALAFSLPRIEKRDVVRIL---DLGTGTGAVCLALLK---------ESPFFKGVGVDI 129 V++A+ F + +IL D+ +G+G V +++LK +S K + DI Sbjct: 99 VENAVNFIEEKFHASSDCKILSVCDMCSGSGCVGISILKFIEEKKIIPKSLLPKIIFADI 158 Query: 130 SCKALEIAKSNA---VTNGVSERFDTLQSDWFSSV----EGLFDVIVSNPPYIESVIVDC 182 S K L+IAK N+ ++ E+ +QS+ F ++ GLFDVIVSNPPYI Sbjct: 159 SKKTLDIAKKNSLRLLSEFAFEKTVFVQSNLFENLGQSRNGLFDVIVSNPPYIPYSQTVE 218 Query: 183 LGLEVRDFDPRISLDGGI----------DGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232 L + R +P ++L G I DGL R + LN G+ +E G Sbjct: 219 LLKDGRS-EPSLALCGDIDLNGNLTNFDDGLEIIRNLIFQSVDFLNPGGILILETGEYNA 277 Query: 233 VDVVRIFESRKLFLVNAFKDYGGNDR 258 +I E + V +KD G R Sbjct: 278 FQTKKIMEDSEFKDVKIYKDLEGQFR 303 >gi|315452642|ref|YP_004072912.1| putative S-adenosylmethionine-dependent methyltransferase [Helicobacter felis ATCC 49179] gi|315131694|emb|CBY82322.1| putative S-adenosylmethionine-dependent methyltransferase [Helicobacter felis ATCC 49179] Length = 277 Score = 78.6 bits (192), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 57/184 (30%), Positives = 88/184 (47%), Gaps = 10/184 (5%) Query: 60 FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119 FY+ + PRPETELLV A I++ + ++++G G+G V ++L + Sbjct: 80 FYSRLFFVDERVLIPRPETELLVHQASEI----IQEYGIKNVIEVGIGSGVVAISLALQH 135 Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESV 178 P +G DIS ALE+A N T + R + + VE ++VSNPPYI Sbjct: 136 PKINVMGTDISMDALEVASINITTFSLQSRVSLMHTSLLQGVEVSPRTLVVSNPPYIP-- 193 Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238 +D E ++P I+L GG +G + + D + K +C E+G NQK + Sbjct: 194 -LDYPLDESVRYEPEIALYGGEEGDEILKALIDEAASKRVKFLIC--EMGDNQKASLSEH 250 Query: 239 FESR 242 E R Sbjct: 251 LEIR 254 >gi|189054214|dbj|BAG36734.1| unnamed protein product [Homo sapiens] Length = 338 Score = 78.6 bits (192), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 68/229 (29%), Positives = 102/229 (44%), Gaps = 12/229 (5%) Query: 44 RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPR---IEKRDVVR 100 R L+ + ILG DF + L + F PRPETE LV+ L R + Sbjct: 103 RRLQRMPVQYILGEWDFQGLSLRMVPPVFIPRPETEELVEWVLEEVAQRSHAVGSPGSPL 162 Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD---- 156 IL++G G+GA+ +LL + P + + VD A+ + NA + +R + D Sbjct: 163 ILEVGCGSGAISPSLLSQLPQSRVIAVDKREAAISLTHENAQRPRLQDRIWIIHLDMTSE 222 Query: 157 --WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214 W G D+IVSNPPY+ ++ L E+R ++ +LDGG +G+ I Sbjct: 223 RSWTHLPWGPMDLIVSNPPYVFHQDMEQLAPEIRSYEDPAALDGGEEGMDIITHILALAP 282 Query: 215 RHLNKDGLCSVEIGYNQKVDVVRIFESRK---LFLVNAFKDYGGNDRVL 260 R L G +E+ V +SR L LV +D+ G R L Sbjct: 283 RLLKDSGSIFLEVDPRHPELVSSWLQSRPDLYLNLVAVRRDFCGRPRFL 331 >gi|166712636|ref|ZP_02243843.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Xanthomonas oryzae pv. oryzicola BLS256] Length = 308 Score = 78.6 bits (192), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 53/160 (33%), Positives = 85/160 (53%), Gaps = 6/160 (3%) Query: 74 PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133 PR L+++ P + R+V R LDL TG+G + +A+ +P + GVDIS A Sbjct: 109 PRSPIAELIEAGFE---PWLGGREVTRALDLCTGSGCIAIAMGHYNPQWDVDGVDISDDA 165 Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDP 192 L +A N ++ L+SD F+ + G +D+IV+NPPY+ + D L E ++P Sbjct: 166 LALAVENKARLH-ADNVTLLKSDLFTGLGGRQYDLIVTNPPYVTNDETDALPQEY-SYEP 223 Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232 + L G DGL I +HL++DGL E+G +++ Sbjct: 224 ELGLRAGDDGLDLVLKILRDAPQHLSEDGLLICEVGESEQ 263 >gi|54023022|ref|YP_117264.1| putative methyltransferase [Nocardia farcinica IFM 10152] gi|54014530|dbj|BAD55900.1| putative methyltransferase [Nocardia farcinica IFM 10152] Length = 290 Score = 78.6 bits (192), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 64/197 (32%), Positives = 96/197 (48%), Gaps = 20/197 (10%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAF--SLPRIEKRDVV 99 I R + + + G + L + F PRPETELL ALA +LP + V+ Sbjct: 62 IDRRAERVPLQHLTGVAAMGEIDLAVGPGVFVPRPETELLFAWALAHLETLPHDHQPIVI 121 Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA---VTNGVSERFDTLQSD 156 DL TG+GA+ LA+ P + V++ AL A+ NA + +G + TL +D Sbjct: 122 ---DLCTGSGALALAIAHARPDAQVHAVELDPAALRWARRNADERIADG--DTPITLHAD 176 Query: 157 ------WFSSVEGLFDVIVSNPPYI-ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209 + + G D++V+NPPYI E ++D EV D DP ++L GG DGL R + Sbjct: 177 DVTDPSLLTDLNGRVDLVVANPPYIPEGAVLDP---EVVDHDPHLALFGGADGLDVIRGM 233 Query: 210 ADGVSRHLNKDGLCSVE 226 ++R L G +E Sbjct: 234 VPTIARLLRPGGATGIE 250 >gi|291457339|ref|ZP_06596729.1| protein-(glutamine-N5) methyltransferase [Bifidobacterium breve DSM 20213] gi|291381174|gb|EFE88692.1| protein-(glutamine-N5) methyltransferase [Bifidobacterium breve DSM 20213] Length = 305 Score = 78.6 bits (192), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 59/234 (25%), Positives = 109/234 (46%), Gaps = 22/234 (9%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV-- 99 + R K E + I G F + L + F PRPETE +V L + + + ++ Sbjct: 75 LARRAKREPLQYITGHAPFRYLDLKVGPGVFIPRPETETVVQVGLDW----LTRNGMIHP 130 Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW-- 157 R++DL G+GA+ L+++ E P + V++S E + N + ++++ ++ S++ Sbjct: 131 RVVDLCAGSGAIGLSVVSEVPGSQVWAVELSPNTAEWTRRN--LSETAKKYPSIASNYHL 188 Query: 158 ----------FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG-IDGLSHY 206 + ++G D++++NPPY+ + EVRD+DP ++L GG +DG Sbjct: 189 EIADATSFATLAQLDGTVDIVITNPPYVPQTDIPEQP-EVRDWDPELALYGGSMDGTLIP 247 Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 I + R L G +E Q +V + + +D+ G DR L Sbjct: 248 ERIIERACRLLKPGGALVMEHDVTQGDRLVAFARATGFAAASTGQDWTGRDRYL 301 >gi|113969757|ref|YP_733550.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Shewanella sp. MR-4] gi|113884441|gb|ABI38493.1| modification methylase, HemK family [Shewanella sp. MR-4] Length = 314 Score = 78.6 bits (192), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 61/176 (34%), Positives = 94/176 (53%), Gaps = 7/176 (3%) Query: 91 PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150 P + + V RILDL TG+G + +A E + +DIS AL++A+ N T GV +R Sbjct: 127 PWLYGKPVNRILDLCTGSGCIAIACAYEFDEAEVDALDISEDALDVAQINVETLGVMDRV 186 Query: 151 DTLQSDWFSSV-EG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208 +QSD FS++ EG +D+IVSNPPY++ + + E +P I L G DGL + Sbjct: 187 FPMQSDLFSAIPEGPQYDLIVSNPPYVDEEDIGDMPDEYH-HEPAIGLASGRDGLDLTKR 245 Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 I +++L G+ VE+G N V ++ F V+ ++GG D V + R Sbjct: 246 ILANAAQYLTPTGILVVEVG-NSMVHLMEQFPEVPFTWVSF--EHGG-DGVFVLTR 297 >gi|299134251|ref|ZP_07027444.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Afipia sp. 1NLS2] gi|298590998|gb|EFI51200.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Afipia sp. 1NLS2] Length = 325 Score = 78.6 bits (192), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 47/134 (35%), Positives = 74/134 (55%), Gaps = 6/134 (4%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVSERFDTLQS 155 V R+LDL TG+G CLA+L FF VD+S AL +A N G+ +R + Sbjct: 159 VGRVLDLCTGSG--CLAILAAQTFFNATLDAVDLSKDALAVAAKNVADYGLEDRISLHKG 216 Query: 156 DWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214 + F+ + +D+I+SNPPY+++ + L E R +P+++ DGG DG+ R I + + Sbjct: 217 NLFAPLGNERYDLIISNPPYVDAEGMASLPPECR-HEPKLAFDGGADGIDIVRRIINEAA 275 Query: 215 RHLNKDGLCSVEIG 228 HL +G E+G Sbjct: 276 AHLTPNGGLLCEVG 289 >gi|297671241|ref|XP_002813754.1| PREDICTED: hemK methyltransferase family member 1-like [Pongo abelii] Length = 338 Score = 78.6 bits (192), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 67/229 (29%), Positives = 103/229 (44%), Gaps = 12/229 (5%) Query: 44 RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPR---IEKRDVVR 100 R L+ + ILG DF + L + F PRPETE LV+ L R + Sbjct: 103 RRLQRMPVQYILGEWDFQGLSLRMVPPVFIPRPETEELVEWVLEEVAQRSHAVGSPGSPL 162 Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD---- 156 IL++G G+GA+ L+LL + P + + VD A+ + NA + +R + D Sbjct: 163 ILEVGCGSGAISLSLLSQLPQSRVIAVDKGEAAISLTHENAQRLRLQDRIWIIHLDMTSE 222 Query: 157 --WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214 W G D++VSNPPY+ ++ L E+R ++ +LDGG +G+ I Sbjct: 223 RSWTHLPWGPVDLVVSNPPYVFHQDMEQLAPEIRSYEDPAALDGGEEGMDIITHILALAP 282 Query: 215 RHLNKDGLCSVEIGYNQKVDVVRIFESRK---LFLVNAFKDYGGNDRVL 260 R L G +E+ + +SR L LV +D+ G R L Sbjct: 283 RLLKDSGSIFLEVDPRHPELISSWLQSRPDLYLNLVAVRRDFCGRPRFL 331 >gi|198273954|ref|ZP_03206486.1| hypothetical protein BACPLE_00090 [Bacteroides plebeius DSM 17135] gi|198273032|gb|EDY97301.1| hypothetical protein BACPLE_00090 [Bacteroides plebeius DSM 17135] Length = 280 Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 69/227 (30%), Positives = 103/227 (45%), Gaps = 10/227 (4%) Query: 42 IVRSLKH-ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR 100 I+R LK E + IL F + PRPETE LV+ + + + VR Sbjct: 59 ILRRLKQREPLQYILQEASFCGRSFHVEQGVLIPRPETEELVE----WIVSDFREAGQVR 114 Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 ILD+GTG+G + ++L + P + D+S +AL IA +N G ++ +D Sbjct: 115 ILDIGTGSGCIPVSLAQLLPEAQVSSCDVSAEALRIAATNVKRYG--DKVTLFCADILKE 172 Query: 161 --VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL-DGGIDGLSHYRTIADGVSRHL 217 E DV+VSNPPYI + V D++P ++L D L YR IA L Sbjct: 173 ELPECQVDVLVSNPPYITESERTDMEANVLDWEPELALFVPDSDPLRFYRRIARKGLDWL 232 Query: 218 NKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 ++ G EI + +R+ E + KD GNDR++ R Sbjct: 233 SEGGALYFEINRAYGAETMRMLEELGYRQIELRKDLSGNDRMIKAIR 279 >gi|117919916|ref|YP_869108.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Shewanella sp. ANA-3] gi|117612248|gb|ABK47702.1| modification methylase, HemK family [Shewanella sp. ANA-3] Length = 314 Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 61/176 (34%), Positives = 94/176 (53%), Gaps = 7/176 (3%) Query: 91 PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150 P + + V RILDL TG+G + +A E + +DIS AL++A+ N T GV +R Sbjct: 127 PWLYGKPVNRILDLCTGSGCIAIACAYEFDEAEVDALDISEDALDVAQINVETLGVMDRV 186 Query: 151 DTLQSDWFSSV-EG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208 +QSD FS++ EG +D+IVSNPPY++ + + E +P I L G DGL + Sbjct: 187 FPMQSDLFSAIPEGPQYDLIVSNPPYVDEEDIGDMPDEYH-HEPAIGLASGRDGLDLTKR 245 Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 I +++L G+ VE+G N V ++ F V+ ++GG D V + R Sbjct: 246 ILANAAQYLTPTGILVVEVG-NSMVHLMEQFPEVPFTWVSF--EHGG-DGVFVLTR 297 >gi|229494562|ref|ZP_04388325.1| methytransferase [Rhodococcus erythropolis SK121] gi|229318924|gb|EEN84782.1| methytransferase [Rhodococcus erythropolis SK121] Length = 264 Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 63/218 (28%), Positives = 94/218 (43%), Gaps = 16/218 (7%) Query: 33 RQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPR 92 R R L + R + E + +LGW +F +R+ + S F PR TE L A + P Sbjct: 41 RSRDELDAMVDRRVAGEPLEPVLGWAEFCGLRIHIDSGVFVPRRRTEFLARQACSLVTPG 100 Query: 93 IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152 ++D+ G+GAV + L VD+ A+ A+ N ++ Sbjct: 101 ------SVVVDMCCGSGAVGVVLQSTLNAVDLYAVDVEPAAVRCARRN-----ITPPERV 149 Query: 153 LQSDWFSSVE----GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208 L+ D F + G DV+V+N PY+ + + + E R +P +SLDGG DGL R Sbjct: 150 LEGDLFEPLPTKLLGRVDVVVANAPYVPTESIRLMPPEARLHEPLVSLDGGTDGLDLQRR 209 Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246 I + L G VE Q V F +R FL Sbjct: 210 IIADAAPWLRPGGCLLVETSTEQVEMTVETF-TRGGFL 246 >gi|190575300|ref|YP_001973145.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Stenotrophomonas maltophilia K279a] gi|190013222|emb|CAQ46856.1| conserved hypothetical protein [Stenotrophomonas maltophilia K279a] Length = 309 Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 52/148 (35%), Positives = 79/148 (53%), Gaps = 13/148 (8%) Query: 91 PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150 P + RDV R LDL TG+G + +A+ P ++ GVD+S AL +A+ N ER Sbjct: 123 PWLAGRDVSRALDLCTGSGCIAIAMGHYYPNWEVDGVDLSDDALSLAEEN------KERL 176 Query: 151 DT-----LQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204 L+SD F+ + G +D+IV+NPPY+ + D L E ++P + L G DGL Sbjct: 177 QAHNVTLLKSDLFNGLTGRHYDLIVTNPPYVTNDETDALPQEY-SYEPEMGLRAGDDGLD 235 Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQK 232 I HL++DGL E+G +++ Sbjct: 236 LVLKILRDAPLHLSEDGLLICEVGESEQ 263 >gi|303237986|ref|ZP_07324529.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Prevotella disiens FB035-09AN] gi|302481776|gb|EFL44828.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Prevotella disiens FB035-09AN] Length = 285 Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 66/226 (29%), Positives = 102/226 (45%), Gaps = 6/226 (2%) Query: 38 LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL-AFSLP--RIE 94 L ++R E I +LG F + + PRPETELL + + P ++ Sbjct: 54 LEKIMLRLETGEPIQYVLGSARFCGRQFGVGKGVLIPRPETELLCQWVMESHDCPFCGLQ 113 Query: 95 KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154 +R+LD+GTG+G + + L + D+S AL IA++NA+ G + F Sbjct: 114 PPAPLRLLDIGTGSGCIAITLALDMANTVVSAYDLSSDALLIARNNAIRMGAAVNFQLKD 173 Query: 155 SDWFSSVEGLFDVIVSNPPYI-ESVIVDCLGLEVRDFDPRISL-DGGIDGLSHYRTIADG 212 + ++ E +FD+IVSNPPYI E+ + L V +F+P +L D L YR IA Sbjct: 174 ALEMTATEEMFDIIVSNPPYICENERTEMLP-NVLNFEPSTALFVPNDDPLRFYRAIAQY 232 Query: 213 VSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258 L+ G EI + DV + + + D G R Sbjct: 233 GQTALSHGGELYFEINEHYGEDVSTMLNTLGYVEIEVRNDQFGKQR 278 >gi|160888033|ref|ZP_02069036.1| hypothetical protein BACUNI_00441 [Bacteroides uniformis ATCC 8492] gi|156862532|gb|EDO55963.1| hypothetical protein BACUNI_00441 [Bacteroides uniformis ATCC 8492] Length = 247 Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 73/242 (30%), Positives = 103/242 (42%), Gaps = 12/242 (4%) Query: 27 DSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL 86 D +L + L + + R E I + G F ++ PRPETE LV+ L Sbjct: 14 DMILSPKDEKELESILFRLCNFEPIQYVQGTARFLGRTFRVAPGVLIPRPETEELVERML 73 Query: 87 AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146 P RILD+GTG+G + + L KE P + DIS +AL IA N Sbjct: 74 EEVAP------ASRILDIGTGSGCIAVTLSKELPEAEVTAWDISGEALAIAGDNNRLLQT 127 Query: 147 SERFDTLQSD---WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL-DGGIDG 202 S +F +Q D + + + FDVIVSNPPY+ + V +++P +L D Sbjct: 128 SVQF--VQRDVLTYQPAEDEYFDVIVSNPPYVTETEKKDMEPNVLNWEPSGALFVPDSDP 185 Query: 203 LSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262 L YR I + L G EI V + + V KD GNDR ++ Sbjct: 186 LRFYRRIGELGRSMLTVGGRLYFEINRAFGEAVASMLRKQGYTNVRIRKDISGNDRYVIA 245 Query: 263 CR 264 R Sbjct: 246 ER 247 >gi|154486887|ref|ZP_02028294.1| hypothetical protein BIFADO_00720 [Bifidobacterium adolescentis L2-32] gi|154084750|gb|EDN83795.1| hypothetical protein BIFADO_00720 [Bifidobacterium adolescentis L2-32] Length = 306 Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 63/232 (27%), Positives = 100/232 (43%), Gaps = 18/232 (7%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101 + R +K E + I G F + L + F PRPETEL+V + ++ R ++ Sbjct: 72 LARRVKREPLQHITGHAPFRYLDLKVGPGVFIPRPETELVVQEGVDWATRNGMYR--AKV 129 Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF----------- 150 +DL G+GA+ LA E P + V+ S E + N + ++R+ Sbjct: 130 VDLCAGSGAIGLAFASEVPGSEVWAVEKSATTAEWTRRN--LDETAKRYPAIAGNYHLDI 187 Query: 151 -DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG-IDGLSHYRT 208 D Q S ++G D++++NPPY+ + E RD+DP ++L GG DG Sbjct: 188 ADATQMPTLSQLDGTIDIVLTNPPYVPLADIPEQP-EARDYDPDLALYGGSADGTLIPER 246 Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 I ++ L DGL +E Q + + V DY G R L Sbjct: 247 IIARAAKLLRADGLMVMEHDITQGERLAAFARTCGFVDVTVHNDYTGRPRYL 298 >gi|307545988|ref|YP_003898467.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Halomonas elongata DSM 2581] gi|307218012|emb|CBV43282.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Halomonas elongata DSM 2581] Length = 355 Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 64/215 (29%), Positives = 102/215 (47%), Gaps = 11/215 (5%) Query: 24 VDPDSVLDDR-----QRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPET 78 VDP VLD R +R + A R + +LG F V ++ PR Sbjct: 107 VDP-GVLDARLLPMERRRIVGLARERIGSRRPLPYLLGEAFFAGVPFSVDERVLIPRSPI 165 Query: 79 ELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAK 138 L++ P +E R+LDL G+G + +A P + D+S +ALE+++ Sbjct: 166 AELIEHGFGAWFP-VEP--PARVLDLCAGSGCIGIATALHLPTCEVDLADVSAEALEVSR 222 Query: 139 SNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197 N + V +R + SD F +EG +++IVSNPPY+++ + + E R +P ++L Sbjct: 223 LNITRHDVGDRVRAVASDLFDGLEGRRYELIVSNPPYVDARDLATMPAEFR-HEPGLALG 281 Query: 198 GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232 G DGL R I HL DG+ VE+G + + Sbjct: 282 AGADGLDIVRRILREAREHLTDDGVLIVEVGNSDR 316 >gi|54295143|ref|YP_127558.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Legionella pneumophila str. Lens] gi|53754975|emb|CAH16463.1| hypothetical protein lpl2223 [Legionella pneumophila str. Lens] gi|307611143|emb|CBX00787.1| hypothetical protein LPW_24911 [Legionella pneumophila 130b] Length = 310 Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 47/144 (32%), Positives = 80/144 (55%), Gaps = 2/144 (1%) Query: 91 PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150 P IE V +LDL TG+G + +A P + VDIS +AL +A N + V ++ Sbjct: 133 PWIEAEQVHHVLDLCTGSGCIAIACCYAFPEAQVDAVDISNQALAVATINCERHDVGDQL 192 Query: 151 DTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209 ++SD F+++ G +D+IVSNPPY+ + L E R +P ++L+ G +GL+ I Sbjct: 193 ALIESDCFTALSGKQYDLIVSNPPYVGKEEMQTLPDEYRH-EPVLALETGNNGLAIIEKI 251 Query: 210 ADGVSRHLNKDGLCSVEIGYNQKV 233 +L++ G+ VE+G +++ Sbjct: 252 LKNAHAYLSEHGILVVEVGNSEEA 275 >gi|257069074|ref|YP_003155329.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Brachybacterium faecium DSM 4810] gi|256559892|gb|ACU85739.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Brachybacterium faecium DSM 4810] Length = 301 Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 79/271 (29%), Positives = 118/271 (43%), Gaps = 27/271 (9%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFF---LTNAIVRSLKHESIHRILGWRDFYN 62 D+ + + G + Q +V +LD+ + F L VR + E + ILG F Sbjct: 32 DARALIAHAAG--TEQPLV----MLDELPQGFTQRLEQLTVRRERREPLQLILGRAPFRR 85 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L + F PRPETEL +D + + ++DL G+GA+ A+L E P Sbjct: 86 LMLDVEPGVFIPRPETELALDLLREHT-----TGPLTEVVDLCAGSGALGAAVLDEIPGA 140 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-----FDVIVSNPPYI-- 175 + + V+I A + + N G R L++D + V L D ++SNPPYI Sbjct: 141 RVLAVEIDPAAAALTRRNLDRAGPG-RGRVLEADLCAEVPELAAAAPVDAVLSNPPYIPP 199 Query: 176 ESVIVDCLGLEVRDFDPRISL-DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234 E+V D EVR+ DP +L GG DGL R + D R L G+ +E Q Sbjct: 200 EAVPRDA---EVREHDPHRALFGGGPDGLEVPRAVLDWARRLLRPGGVLVMEHADVQGAA 256 Query: 235 VVRIFESRKLF-LVNAFKDYGGNDRVLLFCR 264 F ++ D G DR L+ R Sbjct: 257 AREAAAVNGGFDQLSTLPDLTGRDRFLVARR 287 >gi|170093107|ref|XP_001877775.1| predicted protein [Laccaria bicolor S238N-H82] gi|164647634|gb|EDR11878.1| predicted protein [Laccaria bicolor S238N-H82] Length = 300 Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 71/212 (33%), Positives = 96/212 (45%), Gaps = 25/212 (11%) Query: 56 GWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL 115 G + F + L PRPETE V + LA SL ++ + +LDLGTG+G + L L Sbjct: 72 GSQPFGPLNLLTRPPVLIPRPETEHWVLN-LAESL-SPAAQNPISLLDLGTGSGCIPLLL 129 Query: 116 LKESP--FFKGVGVDISCKALEIAKSNAVTNGVSER-------------FDTLQSDWFSS 160 P GVDIS A+ +A NA G+ + F +D F Sbjct: 130 CHLWPPGSVHACGVDISPHAMRLATDNAALCGIPQNASAISPQNTFKATFANFLADHFP- 188 Query: 161 VEGL-----FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215 V GL FDVI SNPPYI L V D++ +L GG GL Y IA + R Sbjct: 189 VGGLRTALPFDVITSNPPYIPWEEYINLPRSVSDYEDPKALFGGPTGLEFYHAIARFLCR 248 Query: 216 H--LNKDGLCSVEIGYNQKVDVVRIFESRKLF 245 L+ + L ++E+G Q V ++ S LF Sbjct: 249 KGVLSPNALVALEVGREQAEKVEQVVLSTGLF 280 >gi|62260141|gb|AAX77884.1| unknown protein [synthetic construct] Length = 349 Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 48/139 (34%), Positives = 81/139 (58%), Gaps = 8/139 (5%) Query: 97 DVVRILDLGTGTGAVCLALLKESPFFKGVG---VDISCKALEIAKSNAVTNGVSERFDTL 153 DV +LDL TG+G + +A S F+ VDIS AL +A N + +S+R + Sbjct: 161 DVTSVLDLCTGSGCIGIAC---SNVFEDANITLVDISDDALAVANHNIKKHQLSDRVRAI 217 Query: 154 QSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212 +SD F ++ G FD+IVSNPPY++ +D + E ++P+++L+ G DGL + I Sbjct: 218 KSDLFDNLHGQKFDLIVSNPPYVDKQDLDTMPHEYH-YEPKLALEAGDDGLDLAKRIILE 276 Query: 213 VSRHLNKDGLCSVEIGYNQ 231 +++ ++G+ VE+G +Q Sbjct: 277 ADKYMTENGVLIVEVGNSQ 295 >gi|331699239|ref|YP_004335478.1| putative protein-(glutamine-N5) methyltransferase [Pseudonocardia dioxanivorans CB1190] gi|326953928|gb|AEA27625.1| putative protein-(glutamine-N5) methyltransferase, unknown substrate-specific [Pseudonocardia dioxanivorans CB1190] Length = 258 Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 61/219 (27%), Positives = 101/219 (46%), Gaps = 17/219 (7%) Query: 38 LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97 L + R + + +I+GW F +R+ ++ F PR T L A+A + RD Sbjct: 36 LAAMVARRAAGDPLEQIVGWAGFRGLRVVVAPGVFVPRQRTSFLAGLAVAAT------RD 89 Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 ++D+ G GAV LA+ ES + D+ A+ A+ N V Q D Sbjct: 90 GATVVDMCCGAGAVALAVRVESGAAQVHAADVDPAAVACARRNLPPATVH------QGDL 143 Query: 158 FSSVE----GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213 ++++ G DV+V+N PY+ + V + E R +P ++LDGG DGL R + G Sbjct: 144 YAALPPDLRGRVDVVVANAPYVPTAAVALMPPEARLHEPMVALDGGGDGLDIARRVVAGA 203 Query: 214 SRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKD 252 + L G+ VE +++ V+R +R F + D Sbjct: 204 PQWLVAGGVLLVET-SDEQAPVLRDVFARNGFAASVESD 241 >gi|160899050|ref|YP_001564632.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Delftia acidovorans SPH-1] gi|160364634|gb|ABX36247.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Delftia acidovorans SPH-1] Length = 325 Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 53/166 (31%), Positives = 92/166 (55%), Gaps = 7/166 (4%) Query: 100 RILDLGTGTGAV-CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 R+LDL TG G++ CLA + P + G DIS AL +A+ N + ++ER L+SD Sbjct: 144 RVLDLCTGNGSLACLAAMA-WPEVEVTGADISADALAVARINVDRHELAERVQLLESDGL 202 Query: 159 SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 +++ G +D+++ NPPY+ + + L E + +P ++L GG DG+ R + + L Sbjct: 203 AALPGPWDLVLCNPPYVNADSMLRLPAEYQ-AEPELALAGGADGMDFIRRLLLDLPSRLA 261 Query: 219 KDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 K+G+ +EIG N+K F +F ++ G+++VLL + Sbjct: 262 KEGVVVLEIG-NEKDFFEAAFPDLPVFWLDT---SSGDEQVLLITQ 303 >gi|319787543|ref|YP_004147018.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Pseudoxanthomonas suwonensis 11-1] gi|317466055|gb|ADV27787.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Pseudoxanthomonas suwonensis 11-1] Length = 310 Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 49/143 (34%), Positives = 80/143 (55%), Gaps = 3/143 (2%) Query: 91 PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150 P + R+V R LDL TG+G + +A+ +P ++ GVDIS AL +A N ++ Sbjct: 124 PWLGGREVHRALDLCTGSGCIAIAMGHYNPDWQVDGVDISDDALALAAENK-ERLHADNV 182 Query: 151 DTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209 + ++SD F+ + G +++IV+NPPY+ D L E D++P + L G DGL I Sbjct: 183 ELVKSDLFAGLAGRRYELIVTNPPYVTDEETDALPREY-DYEPELGLRAGPDGLDLVLKI 241 Query: 210 ADGVSRHLNKDGLCSVEIGYNQK 232 HL++DGL E+G +++ Sbjct: 242 LRDAPDHLSEDGLLICEVGESEQ 264 >gi|197285660|ref|YP_002151532.1| methylase [Proteus mirabilis HI4320] gi|227356165|ref|ZP_03840554.1| site-specific DNA-methyltransferase (adenine-specific) [Proteus mirabilis ATCC 29906] gi|194683147|emb|CAR43748.1| putative methylase [Proteus mirabilis HI4320] gi|227163629|gb|EEI48545.1| site-specific DNA-methyltransferase (adenine-specific) [Proteus mirabilis ATCC 29906] Length = 310 Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 50/145 (34%), Positives = 80/145 (55%), Gaps = 3/145 (2%) Query: 96 RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155 ++ RILDL TG+G + +A E + VDIS ALE+A+ N +G+ R +QS Sbjct: 131 QEPTRILDLCTGSGCIAIACAHEFQEAEVDAVDISADALEVAEFNIENHGLIHRVYPMQS 190 Query: 156 DWFSS-VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214 D F + V +D+IV+NPPY+++ + L E +P ++L G+DGL R I Sbjct: 191 DLFEAIVPTPYDIIVTNPPYVDAEDMGDLPDEYH-IEPELALASGVDGLDITRQILLKAP 249 Query: 215 RHLNKDGLCSVEIGYNQKVDVVRIF 239 +L++ G+ E+G N V ++ F Sbjct: 250 DYLSEKGILVCEVG-NSMVHLIEQF 273 >gi|167571408|ref|ZP_02364282.1| hemK protein [Burkholderia oklahomensis C6786] Length = 182 Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 54/165 (32%), Positives = 81/165 (49%), Gaps = 7/165 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER----FDTLQSD 156 +LDLGTG+GA+ +++ E P + +D S AL++A+ NA R L+SD Sbjct: 12 VLDLGTGSGAIAVSIASERPDARVWALDRSAAALDVARRNARKLLAPARPGGPLQFLESD 71 Query: 157 WFSSVEG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214 W+++++ F VIVSNPPYI ++R F+PR +L DGL+ R I G Sbjct: 72 WYAALDSGRRFHVIVSNPPYIARHDPHLAEGDLR-FEPRGALTDDDDGLAAIRAIVAGAH 130 Query: 215 RHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRV 259 L G +E GY+Q V E+ V + D +R Sbjct: 131 AFLAPGGALWIEHGYDQAAAVRARLEAAGFADVESLADLASIERA 175 >gi|297582016|ref|ZP_06943935.1| conserved hypothetical protein [Vibrio cholerae RC385] gi|297533711|gb|EFH72553.1| conserved hypothetical protein [Vibrio cholerae RC385] Length = 314 Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 44/130 (33%), Positives = 74/130 (56%), Gaps = 2/130 (1%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 RI+DL TG+G + +A P + +DIS AL++A+ N +G+ ++ ++SD F Sbjct: 139 RIMDLCTGSGCIAIACANAFPEAEVDAIDISVDALQVAEQNIQDHGLEQQVFPIRSDLFR 198 Query: 160 SV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 + + +D+IV+NPPY++ +D L E R +P + L G DGL R I S +L Sbjct: 199 DLPQEQYDLIVTNPPYVDQEDMDSLPSEFR-HEPELGLAAGSDGLKLARRILANASLYLK 257 Query: 219 KDGLCSVEIG 228 ++G+ E+G Sbjct: 258 ENGVLVCEVG 267 >gi|104780703|ref|YP_607201.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Pseudomonas entomophila L48] gi|95109690|emb|CAK14391.1| modification methylase [Pseudomonas entomophila L48] Length = 302 Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 63/209 (30%), Positives = 99/209 (47%), Gaps = 11/209 (5%) Query: 27 DSVLDDRQRFFLTNAIVRSLKHE-SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85 D L+D +R L + + R ++ +LG F + + PR L++ Sbjct: 58 DCQLEDDERVRLQHLLKRRIEERVPTAYLLGEAWFCGMSFIVDERVLVPRSPIGELIEKR 117 Query: 86 LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG--VGVDISCKALEIAKSNAVT 143 L + RILDL TG+G C+ ++ F V D+S ALE+A N Sbjct: 118 FEPWL----ATEPARILDLCTGSG--CIGIVAADVFQDAEVVLADLSFAALEVANQNIER 171 Query: 144 NGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202 +G+ +R T+Q D F + G FD+I+SNPPY+++ D + E +P + L G DG Sbjct: 172 HGLEQRVYTVQGDGFGGLPGQRFDLILSNPPYVDAEDFDDMPAEYH-HEPELGLACGNDG 230 Query: 203 LSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231 L R + + HL + GL VE+G +Q Sbjct: 231 LDLVRRMLAEAADHLTEKGLLIVEVGNSQ 259 >gi|116668825|ref|YP_829758.1| HemK family modification methylase [Arthrobacter sp. FB24] gi|116608934|gb|ABK01658.1| modification methylase, HemK family [Arthrobacter sp. FB24] Length = 313 Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 58/207 (28%), Positives = 87/207 (42%), Gaps = 1/207 (0%) Query: 38 LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97 L + I R + + ILGW +F +R+ +++ F PR T LV A L Sbjct: 87 LESMIERRVAGLPLEHILGWAEFCGLRIGVTAGVFVPRRRTGFLVRQA-ELLLRATHDGG 145 Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 V R++DL G+GAV AL + D+ A+ AK N G L Sbjct: 146 VPRVVDLCCGSGAVGAALAARVAGIELHAADLDPTAVLCAKGNIEPAGGHVHQGDLFEAL 205 Query: 158 FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217 + + G V+V+N PY+ + + + E R +P +SLDGG DGL R + G L Sbjct: 206 PARLRGRITVLVANAPYVPTAAIGTMPPEARAHEPLMSLDGGPDGLDIQRRVIAGAPAWL 265 Query: 218 NKDGLCSVEIGYNQKVDVVRIFESRKL 244 G +E Q + + L Sbjct: 266 APGGHVLIETSRRQARRTIGLMRGAGL 292 >gi|237746595|ref|ZP_04577075.1| modification methylase HemK [Oxalobacter formigenes HOxBLS] gi|229377946|gb|EEO28037.1| modification methylase HemK [Oxalobacter formigenes HOxBLS] Length = 302 Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 55/169 (32%), Positives = 86/169 (50%), Gaps = 10/169 (5%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVSERFDTLQS 155 + IL+L TG+G CLA++ F V++S AL IA++N G+ +R + Sbjct: 131 ITDILELCTGSG--CLAIMLADRFANATVDAVELSPAALGIAQTNINRYGMKDRIQLHHA 188 Query: 156 DWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214 D + + E + +IV+NPPY+ +D L E +P+++L GG DG+ R I Sbjct: 189 DLYDGIPEKRYQLIVTNPPYVNQSSMDTLPPEYLH-EPQMALAGGFDGMDIVRRIVYTAG 247 Query: 215 RHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFC 263 L DGL VEIG N+ + + F +L ++ GG+DRV L Sbjct: 248 ERLTDDGLLIVEIG-NEAENAMAAFPELELTWLST---SGGDDRVFLLT 292 >gi|258654968|ref|YP_003204124.1| modification methylase, HemK family [Nakamurella multipartita DSM 44233] gi|258558193|gb|ACV81135.1| modification methylase, HemK family [Nakamurella multipartita DSM 44233] Length = 276 Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 57/195 (29%), Positives = 93/195 (47%), Gaps = 4/195 (2%) Query: 50 SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109 + ++GW +F +R+ ++ F PR + LLV +A+ R E +++L G G Sbjct: 59 PLEYLVGWVEFDGLRIAVTDGVFVPRQRSRLLVRAAVGHLAGRPEPL----VVELCCGCG 114 Query: 110 AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIV 169 A+ LA+ P + DI A+ A+SN G + L + + G DV+V Sbjct: 115 AIGLAIAAAVPGVRLHAADIDPVAVGCARSNLAPIGAAVYAGDLFAALPGRLRGAVDVLV 174 Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY 229 +N PY+ + + + E RD +P I+LDGG DG R + G L DG+ VE+G Sbjct: 175 ANAPYVPTAAIALMPPEARDHEPGIALDGGPDGTRVLRRVIAGAVAWLAPDGVLLVEVGT 234 Query: 230 NQKVDVVRIFESRKL 244 +Q + F + L Sbjct: 235 SQIPLITTAFTAAGL 249 >gi|227114798|ref|ZP_03828454.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 310 Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 50/156 (32%), Positives = 80/156 (51%), Gaps = 6/156 (3%) Query: 74 PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133 PR L+++ LP+ ILDL TG+G + +A + P + VDIS +A Sbjct: 113 PRSPIGELINNYFDEQLPKTPNH----ILDLCTGSGCIAIACAQAFPEAEVDAVDISSEA 168 Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDP 192 L + + N +G+ R ++SD F + + +D+IV+NPPY++ + L E R F+P Sbjct: 169 LAVTEQNIQQHGLEYRVTPIRSDLFRDLPAIRYDLIVTNPPYVDEEDMSDLPQEFR-FEP 227 Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228 + L G DGL R I +L+ DG+ E+G Sbjct: 228 ELGLAAGNDGLDLVRRILACAPDYLSDDGVLICEVG 263 >gi|89256954|ref|YP_514316.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Francisella tularensis subsp. holarctica LVS] gi|115315316|ref|YP_764039.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Francisella tularensis subsp. holarctica OSU18] gi|118496921|ref|YP_897971.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Francisella tularensis subsp. novicida U112] gi|134301405|ref|YP_001121373.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Francisella tularensis subsp. tularensis WY96-3418] gi|156503148|ref|YP_001429213.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Francisella tularensis subsp. holarctica FTNF002-00] gi|167010048|ref|ZP_02274979.1| hypothetical adenine-specific methylase YfcB [Francisella tularensis subsp. holarctica FSC200] gi|194324148|ref|ZP_03057922.1| hypothetical adenine-specific methylase YfcB [Francisella tularensis subsp. novicida FTE] gi|208780371|ref|ZP_03247712.1| hypothetical adenine-specific methylase YfcB [Francisella novicida FTG] gi|254368216|ref|ZP_04984236.1| adenine-specific methylase, hemK family [Francisella tularensis subsp. holarctica 257] gi|254372283|ref|ZP_04987774.1| modification methylase [Francisella tularensis subsp. novicida GA99-3549] gi|254373762|ref|ZP_04989245.1| hypothetical protein FTDG_01546 [Francisella novicida GA99-3548] gi|290954115|ref|ZP_06558736.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Francisella tularensis subsp. holarctica URFT1] gi|295312485|ref|ZP_06803254.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Francisella tularensis subsp. holarctica URFT1] gi|89144785|emb|CAJ80123.1| Adenine-specific methylase, HemK family [Francisella tularensis subsp. holarctica LVS] gi|115130215|gb|ABI83402.1| HemK family, adenine-specific methylase [Francisella tularensis subsp. holarctica OSU18] gi|118422827|gb|ABK89217.1| modification methylase, HemK family [Francisella novicida U112] gi|134049182|gb|ABO46253.1| methyltransferase, HemK family [Francisella tularensis subsp. tularensis WY96-3418] gi|134254026|gb|EBA53120.1| adenine-specific methylase, hemK family [Francisella tularensis subsp. holarctica 257] gi|151570012|gb|EDN35666.1| modification methylase [Francisella novicida GA99-3549] gi|151571483|gb|EDN37137.1| hypothetical protein FTDG_01546 [Francisella novicida GA99-3548] gi|156253751|gb|ABU62257.1| methyltransferase, HemK family protein [Francisella tularensis subsp. holarctica FTNF002-00] gi|194321595|gb|EDX19079.1| hypothetical adenine-specific methylase YfcB [Francisella tularensis subsp. novicida FTE] gi|208743739|gb|EDZ90042.1| hypothetical adenine-specific methylase YfcB [Francisella novicida FTG] gi|328676394|gb|AEB27264.1| Adenine-specific methylase, HemK family [Francisella cf. novicida Fx1] Length = 314 Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 48/139 (34%), Positives = 81/139 (58%), Gaps = 8/139 (5%) Query: 97 DVVRILDLGTGTGAVCLALLKESPFFKGVG---VDISCKALEIAKSNAVTNGVSERFDTL 153 DV +LDL TG+G + +A S F+ VDIS AL +A N + +S+R + Sbjct: 135 DVTSVLDLCTGSGCIGIAC---SNVFEDANITLVDISDDALAVANHNIKKHQLSDRVRAI 191 Query: 154 QSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212 +SD F ++ G FD+IVSNPPY++ +D + E ++P+++L+ G DGL + I Sbjct: 192 KSDLFDNLHGQKFDLIVSNPPYVDKQDLDTMPHEYH-YEPKLALEAGDDGLDLAKRIILE 250 Query: 213 VSRHLNKDGLCSVEIGYNQ 231 +++ ++G+ VE+G +Q Sbjct: 251 ADKYMTENGVLIVEVGNSQ 269 >gi|254369814|ref|ZP_04985824.1| hypothetical protein FTAG_01155 [Francisella tularensis subsp. holarctica FSC022] gi|157122773|gb|EDO66902.1| hypothetical protein FTAG_01155 [Francisella tularensis subsp. holarctica FSC022] Length = 314 Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 57/207 (27%), Positives = 105/207 (50%), Gaps = 10/207 (4%) Query: 29 VLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAF 88 +L + ++ + R+ + + IL F + + PR L+ + + Sbjct: 69 LLTEEKKIIIDYVYQRACLRKPLPYILKKAWFAGMEFDIDERVIIPRSPIAELIRNEFSP 128 Query: 89 SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG---VDISCKALEIAKSNAVTNG 145 + I+ DV +LDL TG+G + +A S F+ VDIS AL +A N + Sbjct: 129 WINDID--DVTSVLDLCTGSGCIGIAC---SNVFEDANITLVDISDDALAVANHNIKKHQ 183 Query: 146 VSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204 +S+R ++SD F ++ G FD+IVSNPPY++ +D + E ++P+++L+ G DGL Sbjct: 184 LSDRVRAIKSDLFDNLHGQKFDLIVSNPPYVDKQDLDTMPHEYH-YEPKLALEAGDDGLD 242 Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQ 231 + I +++ ++G+ VE+G +Q Sbjct: 243 LAKRIILEADKYMTENGVLIVEVGNSQ 269 >gi|157374776|ref|YP_001473376.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Shewanella sediminis HAW-EB3] gi|157317150|gb|ABV36248.1| Site-specific DNA-methyltransferase (adenine-specific) [Shewanella sediminis HAW-EB3] Length = 314 Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 57/176 (32%), Positives = 93/176 (52%), Gaps = 7/176 (3%) Query: 91 PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150 P + + V R+LDL TG+ + +A E + +DIS ALE+A+ N + GV +R Sbjct: 127 PWLYNKSVNRVLDLCTGSACIAIACAYEFDEAEVDALDISTDALEVAQINVESLGVMDRV 186 Query: 151 DTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208 ++SD FS++ +D+IVSNPPY+++ + + E +P + L G DGL + Sbjct: 187 FPMESDIFSAIPKGPHYDLIVSNPPYVDAEDIGDMPDEFH-HEPEVGLASGRDGLDLTKR 245 Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 I S +L ++GL VE+G N V ++ F V+ ++GG D V + R Sbjct: 246 ILANASDYLTEEGLLVVEVG-NSMVHLIEQFPDVPFTWVSF--EHGG-DGVFVLTR 297 >gi|254520952|ref|ZP_05133007.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Stenotrophomonas sp. SKA14] gi|219718543|gb|EED37068.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Stenotrophomonas sp. SKA14] Length = 309 Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 50/143 (34%), Positives = 79/143 (55%), Gaps = 3/143 (2%) Query: 91 PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150 P + RDV R LDL TG+G + +A+ P ++ GVD+S AL +A+ N + Sbjct: 123 PWLAGRDVYRALDLCTGSGCIAIAMGHYYPNWQVDGVDLSDDALSLAEENR-ERLQAYNV 181 Query: 151 DTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209 + L+SD F+ + G +D+IV+NPPY+ + D L E ++P + L G DGL I Sbjct: 182 NLLKSDLFNGLSGRHYDLIVTNPPYVTNDETDALPKEY-SYEPDMGLRAGDDGLDLVLKI 240 Query: 210 ADGVSRHLNKDGLCSVEIGYNQK 232 HL++DGL E+G +++ Sbjct: 241 LRDAPLHLSEDGLLICEVGESEQ 263 >gi|56708636|ref|YP_170532.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Francisella tularensis subsp. tularensis SCHU S4] gi|110671108|ref|YP_667665.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Francisella tularensis subsp. tularensis FSC198] gi|224457830|ref|ZP_03666303.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Francisella tularensis subsp. tularensis MA00-2987] gi|254371269|ref|ZP_04987271.1| hypothetical protein [Francisella tularensis subsp. tularensis FSC033] gi|254875502|ref|ZP_05248212.1| hemK, adenine-specific methylase [Francisella tularensis subsp. tularensis MA00-2987] gi|56605128|emb|CAG46250.1| Adenine-specific methylase, HemK family [Francisella tularensis subsp. tularensis SCHU S4] gi|110321441|emb|CAL09633.1| Adenine-specific methylase, HemK family [Francisella tularensis subsp. tularensis FSC198] gi|151569509|gb|EDN35163.1| hypothetical protein FTBG_01043 [Francisella tularensis subsp. tularensis FSC033] gi|254841501|gb|EET19937.1| hemK, adenine-specific methylase [Francisella tularensis subsp. tularensis MA00-2987] gi|282159874|gb|ADA79265.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Francisella tularensis subsp. tularensis NE061598] Length = 314 Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 48/139 (34%), Positives = 81/139 (58%), Gaps = 8/139 (5%) Query: 97 DVVRILDLGTGTGAVCLALLKESPFFKGVG---VDISCKALEIAKSNAVTNGVSERFDTL 153 DV +LDL TG+G + +A S F+ VDIS AL +A N + +S+R + Sbjct: 135 DVTSVLDLCTGSGCIGIAC---SNVFEDANITLVDISDDALAVANHNIKKHQLSDRVRAI 191 Query: 154 QSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212 +SD F ++ G FD+IVSNPPY++ +D + E ++P+++L+ G DGL + I Sbjct: 192 KSDLFDNLHGQKFDLIVSNPPYVDKQDLDTMPHEYH-YEPKLALEAGDDGLDLAKRIILE 250 Query: 213 VSRHLNKDGLCSVEIGYNQ 231 +++ ++G+ VE+G +Q Sbjct: 251 ADKYMTENGVLIVEVGNSQ 269 >gi|187931125|ref|YP_001891109.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Francisella tularensis subsp. mediasiatica FSC147] gi|187712034|gb|ACD30331.1| modification methylase, HemK family [Francisella tularensis subsp. mediasiatica FSC147] Length = 314 Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 48/139 (34%), Positives = 81/139 (58%), Gaps = 8/139 (5%) Query: 97 DVVRILDLGTGTGAVCLALLKESPFFKGVG---VDISCKALEIAKSNAVTNGVSERFDTL 153 DV +LDL TG+G + +A S F+ VDIS AL +A N + +S+R + Sbjct: 135 DVTSVLDLCTGSGCIGIAC---SNVFEDANITLVDISDDALTVANHNIKKHQLSDRVRAI 191 Query: 154 QSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212 +SD F ++ G FD+IVSNPPY++ +D + E ++P+++L+ G DGL + I Sbjct: 192 KSDLFDNLHGQKFDLIVSNPPYVDKQDLDTMPHEYH-YEPKLALEAGDDGLDLAKRIILE 250 Query: 213 VSRHLNKDGLCSVEIGYNQ 231 +++ ++G+ VE+G +Q Sbjct: 251 ADKYMTENGVLIVEVGNSQ 269 >gi|157962410|ref|YP_001502444.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Shewanella pealeana ATCC 700345] gi|157847410|gb|ABV87909.1| modification methylase, HemK family [Shewanella pealeana ATCC 700345] Length = 314 Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 66/209 (31%), Positives = 104/209 (49%), Gaps = 12/209 (5%) Query: 59 DFYNVRLTLSSDTFEPR-PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117 +F + + PR P EL+ + FS P + + V R+LDL TG+ + +A Sbjct: 98 NFAGLEFYVDERVLVPRSPIAELIANR---FS-PWLYNKPVNRVLDLCTGSACIAIACAY 153 Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYI 175 E + +DIS AL++A+ N T V +R ++SD FS++ +D+IVSNPPY+ Sbjct: 154 EFEDAEVDALDISVDALDVAQINIETLEVMDRVFPMESDLFSAIPKGAHYDLIVSNPPYV 213 Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235 ++ + + E +P I L G DGL + I + +L +DGL VE+G N V + Sbjct: 214 DAEDIGDMPDEYH-HEPEIGLASGRDGLDLTKRILANAADYLTEDGLLVVEVG-NSMVHL 271 Query: 236 VRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 F VN F++ G D V + R Sbjct: 272 SEQFPDVPFTWVN-FEN--GGDGVFILTR 297 >gi|240102561|ref|YP_002958870.1| Methylase, putative, hemK and PrmA related [Thermococcus gammatolerans EJ3] gi|239910115|gb|ACS33006.1| Methylase, putative, hemK and PrmA related [Thermococcus gammatolerans EJ3] Length = 195 Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 54/166 (32%), Positives = 86/166 (51%), Gaps = 28/166 (16%) Query: 60 FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119 +Y ++L L SD +EP +T LL ++ +E R LD+GTGTG + L + +++ Sbjct: 6 YYGIKLELHSDVYEPAEDTFLLAET--------LEVRPGEIALDVGTGTGLIALLMARKA 57 Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179 + +GVD++ KA+E+A+ NA NG+S + SD F +V G FDVI N PY+ Sbjct: 58 KYV--LGVDVNPKAVELARRNARLNGIS-NVEFRLSDLFENVSGRFDVITFNAPYLPG-- 112 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIAD----GVSRHLNKDG 221 +P ++D + G R + D V HLN++G Sbjct: 113 -----------EPEKAIDLALVGGKTGREVIDRFIAEVPDHLNENG 147 >gi|289767518|ref|ZP_06526896.1| methylase [Streptomyces lividans TK24] gi|289697717|gb|EFD65146.1| methylase [Streptomyces lividans TK24] Length = 280 Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 64/211 (30%), Positives = 92/211 (43%), Gaps = 14/211 (6%) Query: 38 LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97 LT + R + + +LGW +F +R+ ++ F PR TE LV ALA + + Sbjct: 60 LTALVGRRVGGLPLELVLGWAEFRGLRIAVAPGVFVPRRRTEFLVSEALAHA----PHAN 115 Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG----VSERFDTL 153 VV L G+G LA + P VD + A+ A+ N G + FD L Sbjct: 116 VVVDLCCGSGAVGAALAAALDRPEVHAADVDPA--AVRCARGNLADAGGRVYAGDLFDAL 173 Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213 ++ G D++ +N PY+ + V L E RD +P ++LDGG DGL R +A Sbjct: 174 PD----ALRGRVDILAANVPYVPTGEVALLPAEARDHEPLVALDGGTDGLDVLRRVAAAA 229 Query: 214 SRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 L G VE Q D V F L Sbjct: 230 PDWLAPGGCLLVETSERQAPDAVGAFTRAGL 260 >gi|126439529|ref|YP_001059484.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Burkholderia pseudomallei 668] gi|126219022|gb|ABN82528.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Burkholderia pseudomallei 668] Length = 307 Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 59/183 (32%), Positives = 89/183 (48%), Gaps = 18/183 (9%) Query: 91 PRIEKRDVV-RILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVS 147 P +E ++V +L+L TG+G CLA+L F VD+S AL +AK N +G+ Sbjct: 122 PYVEDPELVGSVLELCTGSG--CLAILAALAFPNASVDAVDLSADALAVAKINRDNDGLD 179 Query: 148 ERFDTLQSDWFSSVEGL--------FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199 ER D ++ + +DVI++NPPY+ + + L E R +P ++L GG Sbjct: 180 ERIALYHGDLYAPLPQFKWIDPARRYDVIIANPPYVNAGSMAELPAEYR-HEPEMALAGG 238 Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRV 259 DG+ R I R L DG+ VEIG N++ +V F +L G+D V Sbjct: 239 ADGMDIVRRIVGEARRWLQDDGVLVVEIG-NERANVEAAFGGLELVW---LPTSAGDDSV 294 Query: 260 LLF 262 L Sbjct: 295 FLI 297 >gi|319900206|ref|YP_004159934.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacteroides helcogenes P 36-108] gi|319415237|gb|ADV42348.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacteroides helcogenes P 36-108] Length = 312 Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 76/259 (29%), Positives = 110/259 (42%), Gaps = 12/259 (4%) Query: 7 SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66 S C + G S+ + D +L +++ L + R E I + G F Sbjct: 59 SRIICCEMLGQSTVDYYLGKDMILSLKEKQELDGILSRLRDFEPIQYVQGTTSFLGRTFR 118 Query: 67 LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126 ++ PRPETE LV+ L E RILD+GTG+G + ++L K P + V Sbjct: 119 VAPGVLIPRPETEELVEIMLK------EIPADARILDIGTGSGCIAVSLSKGLPCAQVVA 172 Query: 127 VDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183 DIS +AL A N S +F D L E +DVIVSNPPY+ + Sbjct: 173 WDISEEALATAHRNNDALQASVQFALCDVLTC--CPDQEDRYDVIVSNPPYVLEKEKLQM 230 Query: 184 GLEVRDFDPRISL-DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 V D++P ++L D L YR IA+ + L G EI V + + Sbjct: 231 ERNVLDWEPSLALFVPDTDPLLFYRRIAELGQKLLVAGGKLYFEINRAFGEATVAMLGGQ 290 Query: 243 KLFLVNAFKDYGGNDRVLL 261 + KD GNDR ++ Sbjct: 291 GYANAHILKDISGNDRFVI 309 >gi|121594426|ref|YP_986322.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Acidovorax sp. JS42] gi|120606506|gb|ABM42246.1| [LSU ribosomal protein L3P]-glutamine N5-methyltransferase [Acidovorax sp. JS42] Length = 309 Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 49/168 (29%), Positives = 86/168 (51%), Gaps = 9/168 (5%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LDL TG G++ + P + G D+S AL +A+ N +G+ ER ++SD ++ Sbjct: 137 VLDLCTGNGSLAVLAAMAYPDVQVTGADLSPDALAVARINVERHGLQERITLVESDGLAA 196 Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD----GGIDGLSHYRTIADGVSRH 216 + G +D+I+ NPPY+ + + L E R +P ++L GG DG+ R + Sbjct: 197 LRGPWDLILCNPPYVNAASMAQLPPEYR-AEPELALSGNMRGGSDGMDFIRQLLADAPAR 255 Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 +++D + +EIG N++ F +F + G+D+VLL R Sbjct: 256 MSEDAVLVLEIG-NEREHFEAAFPDLPVFW---LETSAGSDQVLLLTR 299 >gi|210634584|ref|ZP_03298180.1| hypothetical protein COLSTE_02102 [Collinsella stercoris DSM 13279] gi|210158769|gb|EEA89740.1| hypothetical protein COLSTE_02102 [Collinsella stercoris DSM 13279] Length = 397 Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 52/171 (30%), Positives = 84/171 (49%), Gaps = 7/171 (4%) Query: 98 VVRILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSE-----RFD 151 V R+L++G GTG + L++ E + V +DI +A+++ N G+S R Sbjct: 224 VARVLEVGCGTGCISLSIAAERRDRVRCVAIDIEPRAVDLTIRNRDALGISPQAVDVRLG 283 Query: 152 TLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210 L S E G FDV+VSNPPYI + ++ L EV DF+P ++L+GG DGL +R + Sbjct: 284 NLVSPLDRETEWGTFDVLVSNPPYIPTSVLTLLPHEVADFEPDLALNGGEDGLDIFRRLV 343 Query: 211 DGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 + L GL + E+ + + ++ V D R++L Sbjct: 344 NAAPHMLRPGGLLACELYEGHLDQAAALCRAAQMTDVRIVNDLTNRPRMIL 394 Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 26/79 (32%), Positives = 39/79 (49%) Query: 10 FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69 L VTGLS ++ + D + + + A+VR K E + I+G DF + + Sbjct: 34 LLSGVTGLSRTEIYMSFDKPMSAEELAAMHGAVVRRAKGEPLQYIIGETDFRTITVACEP 93 Query: 70 DTFEPRPETELLVDSALAF 88 PRPETELLV+ L + Sbjct: 94 GVLIPRPETELLVEEVLRY 112 >gi|183599681|ref|ZP_02961174.1| hypothetical protein PROSTU_03170 [Providencia stuartii ATCC 25827] gi|188021935|gb|EDU59975.1| hypothetical protein PROSTU_03170 [Providencia stuartii ATCC 25827] Length = 310 Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 52/165 (31%), Positives = 85/165 (51%), Gaps = 6/165 (3%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 ILD+ TG+G + +A E P + VDIS L + + N +G+ R ++SD F Sbjct: 136 ILDMCTGSGCIAIACAYEFPEAEVDAVDISTDVLAVTEHNIANHGLEHRVIPIRSDLFRD 195 Query: 161 VEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 + + +D+IV+NPPY+++ +D L E R +P ++L G DGL R I R L+ Sbjct: 196 MPDVKYDLIVTNPPYVDAEDMDDLPEEFR-VEPELALAAGSDGLKLVRRILANAPRFLSD 254 Query: 220 DGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 +G+ E+G N V ++ + + +YGG D V + R Sbjct: 255 EGVLICEVG-NSMVHLIEQYPEIPFIWLEF--EYGG-DGVFMLTR 295 >gi|21225345|ref|NP_631124.1| methylase [Streptomyces coelicolor A3(2)] gi|9716169|emb|CAC01560.1| putative methylase [Streptomyces coelicolor A3(2)] Length = 280 Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 64/211 (30%), Positives = 92/211 (43%), Gaps = 14/211 (6%) Query: 38 LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97 LT + R + + +LGW +F +R+ ++ F PR TE LV ALA + + Sbjct: 60 LTALVGRRVGGLPLELVLGWAEFRGLRIAVAPGVFVPRRRTEFLVSEALAHA----PHAN 115 Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG----VSERFDTL 153 VV L G+G LA + P VD + A+ A+ N G + FD L Sbjct: 116 VVVDLCCGSGAVGAALAAALDRPEVHAADVDPA--AVRCARGNLADAGGRVYAGDLFDAL 173 Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213 ++ G D++ +N PY+ + V L E RD +P ++LDGG DGL R +A Sbjct: 174 PD----ALRGRVDILAANVPYVPTGEVALLPAEARDHEPLVALDGGTDGLDVLRRVAAAA 229 Query: 214 SRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 L G VE Q D V F L Sbjct: 230 PGWLAPGGCLLVETSERQAPDAVGAFTRAGL 260 >gi|54298194|ref|YP_124563.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Legionella pneumophila str. Paris] gi|53751979|emb|CAH13405.1| hypothetical protein lpp2252 [Legionella pneumophila str. Paris] Length = 310 Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 50/161 (31%), Positives = 87/161 (54%), Gaps = 5/161 (3%) Query: 74 PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133 PR L+++ + P IE V +LDL TG+G + +A P + VDIS +A Sbjct: 119 PRSPIGELINNQFS---PWIEAERVHHVLDLCTGSGCIAIACCYAFPEAQVDAVDISNQA 175 Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDP 192 L +A N + V ++ ++SD F+++ G +D+IVSNPPY+ + L E R +P Sbjct: 176 LAVATINCERHDVGDQLALIESDCFTALSGKQYDLIVSNPPYVGKEEMQTLPDEYRH-EP 234 Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233 ++L+ G +GL+ I +L++ G+ VE+G +++ Sbjct: 235 VLALETGNNGLAIIEKILKNAHAYLSEHGILVVEVGNSEEA 275 >gi|254247871|ref|ZP_04941192.1| Modification methylase HemK [Burkholderia cenocepacia PC184] gi|124872647|gb|EAY64363.1| Modification methylase HemK [Burkholderia cenocepacia PC184] Length = 302 Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 58/178 (32%), Positives = 88/178 (49%), Gaps = 16/178 (8%) Query: 94 EKRDVVRILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVSERFD 151 + V +L+L TG+G CLA+L S F VD+S KALE+A+ N G+ +R Sbjct: 123 DPEQVGAVLELCTGSG--CLAILAASAFPNAEIDAVDLSDKALEVAEINVRDYGLEDRIG 180 Query: 152 TLQSDWFSSVEGL-------FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204 + D ++ + +DVI++NPPY+ + + L E R +P ++L GG DG+ Sbjct: 181 LHRGDLYAPLPAFRTDPDSRYDVILTNPPYVNAASMAALPPEYR-HEPEMALAGGDDGMD 239 Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262 R I R L+ DG+ VEIG N++ V F +L G+D V L Sbjct: 240 IVRRIVAEAHRWLHDDGVLVVEIG-NEREHVEAAFGGLEL---TWLPTSAGDDAVFLI 293 >gi|134296042|ref|YP_001119777.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Burkholderia vietnamiensis G4] gi|134139199|gb|ABO54942.1| [LSU ribosomal protein L3P]-glutamine N5-methyltransferase [Burkholderia vietnamiensis G4] Length = 302 Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 58/178 (32%), Positives = 90/178 (50%), Gaps = 16/178 (8%) Query: 94 EKRDVVRILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVSERFD 151 + V +L+L TG+G CLA+L S F VD+S ALE+A+ N G+ +R Sbjct: 123 DPEQVGAVLELCTGSG--CLAILAASAFPNADIDAVDLSDDALEVARINVRDYGLEDRIT 180 Query: 152 TLQSDWFSSV-------EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204 + D ++ + +G +DVI++NPPY+ + + L E R +P ++L GG DG+ Sbjct: 181 LHRGDLYAPLPAFRAEPDGRYDVILTNPPYVNAASMAALPPEYR-HEPEMALAGGDDGMD 239 Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262 R I R L+ DG+ VEIG N++ +V F +L G+D V L Sbjct: 240 IVRRIVGEAHRWLHDDGVLVVEIG-NERENVEAAFGGLEL---TWLPTSAGDDAVFLI 293 >gi|121997613|ref|YP_001002400.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Halorhodospira halophila SL1] gi|121589018|gb|ABM61598.1| [LSU ribosomal protein L3P]-glutamine N5-methyltransferase [Halorhodospira halophila SL1] Length = 306 Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 49/142 (34%), Positives = 74/142 (52%), Gaps = 8/142 (5%) Query: 91 PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150 P ++ V R+L++GTG+G + +A P DI ALE+A N + + ER Sbjct: 125 PWVDPDAVERVLEIGTGSGCIAVACAYAFPGAAVDATDIDDDALEVAAVNVHRHDLEERI 184 Query: 151 DTLQSDWFSSVEGL----FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206 +++D + EGL + +IV+NPPY+++ + L E R +PR +L G DGL Sbjct: 185 ALIRADVY---EGLPQRRYQIIVTNPPYVDAAAMAALPPEYR-HEPRHALAAGEDGLDVV 240 Query: 207 RTIADGVSRHLNKDGLCSVEIG 228 R I G L DGL VE+G Sbjct: 241 RRILRGAPERLTDDGLLVVEVG 262 >gi|52842514|ref|YP_096313.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|148359841|ref|YP_001251048.1| adenine specific methylase [Legionella pneumophila str. Corby] gi|296107891|ref|YP_003619592.1| adenine specific methylase [Legionella pneumophila 2300/99 Alcoy] gi|52629625|gb|AAU28366.1| adenine specific methylase [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|148281614|gb|ABQ55702.1| adenine specific methylase [Legionella pneumophila str. Corby] gi|295649793|gb|ADG25640.1| adenine specific methylase [Legionella pneumophila 2300/99 Alcoy] Length = 310 Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 47/144 (32%), Positives = 80/144 (55%), Gaps = 2/144 (1%) Query: 91 PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150 P IE V +LDL TG+G + +A P + VDIS +AL +A N + V ++ Sbjct: 133 PWIEAERVHHVLDLCTGSGCIAIACCYAFPEAQVDAVDISNQALAVATINCERHDVGDQL 192 Query: 151 DTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209 ++SD F+++ G +D+IVSNPPY+ + L E R +P ++L+ G +GL+ I Sbjct: 193 ALIESDCFTALSGKQYDLIVSNPPYVGKEEMQTLPDEYRH-EPVLALETGNNGLAIIEKI 251 Query: 210 ADGVSRHLNKDGLCSVEIGYNQKV 233 +L++ G+ VE+G +++ Sbjct: 252 LKNAHAYLSEHGILVVEVGNSEEA 275 >gi|281338315|gb|EFB13899.1| hypothetical protein PANDA_009308 [Ailuropoda melanoleuca] Length = 338 Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 73/244 (29%), Positives = 112/244 (45%), Gaps = 13/244 (5%) Query: 30 LDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL--- 86 L RQ + R L+ + ILG DF + L + F PRPETE LV+ L Sbjct: 89 LTPRQLQCVQELSSRRLQRMPVQYILGEWDFQGLSLKMVPPVFIPRPETEELVEWVLEEV 148 Query: 87 AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146 A S + + IL++G G+GA+ L+LL + P + + VD A+ + + NA + Sbjct: 149 AQSPCAMGAQGGPLILEVGCGSGAIALSLLSQLPQSRVIAVDKGEAAICLTQENAQRLQL 208 Query: 147 SERFD------TLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199 +R TL+ W + G D++VSNPPYI ++ L E+R ++ ++LDGG Sbjct: 209 LDRIQIVPLDVTLEGSWAHLLTWGPMDLVVSNPPYIFHRDMEQLAPEIRSYEDPLALDGG 268 Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK---LFLVNAFKDYGGN 256 +G+ I L G +E+ V +SR L LV +D+ G Sbjct: 269 EEGMDIITYILALAPWLLKDSGSIFLEVDPRHPELVGSWLQSRPDLSLDLVAVRRDFCGR 328 Query: 257 DRVL 260 R L Sbjct: 329 SRFL 332 >gi|258652313|ref|YP_003201469.1| modification methylase, HemK family [Nakamurella multipartita DSM 44233] gi|258555538|gb|ACV78480.1| modification methylase, HemK family [Nakamurella multipartita DSM 44233] Length = 298 Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 72/243 (29%), Positives = 113/243 (46%), Gaps = 20/243 (8%) Query: 34 QRFFLTN--AIV-RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSL 90 ++ FLT+ A+V R + + + G + + F PRPETE L+ AL ++ Sbjct: 51 EQSFLTDYQALVERRAQRIPLQHLTGSVQLGRATVAVGPGVFVPRPETESLLVWAL-HAI 109 Query: 91 PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150 +E+ VV DL TG+G + LA+ E P + +GV+ S AL A+ N VTN + R Sbjct: 110 AAVERPVVV---DLCTGSGVLALAIAAERPDARVIGVERSSAALAWARRN-VTNAGAGRT 165 Query: 151 -------DTLQSDWFSSVEGLFDVIVSNPPYI-ESVIVDCLGLEVRDFDPRISLDGGIDG 202 D +EGL D++ +NPPY+ E V+ EV D DP ++ G DG Sbjct: 166 KVELRGGDIFDERLLVDLEGLADLVTANPPYVPEGTAVEP---EVADHDPPEAVFAGPDG 222 Query: 203 LSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL-VNAFKDYGGNDRVLL 261 L+ R + + L G+ ++E + V + SR++ V D G R + Sbjct: 223 LAVIRPLLSVAASLLKLGGVLAIEHDDSHGETVPALLRSRRVLTDVEDHSDLAGRPRFVT 282 Query: 262 FCR 264 R Sbjct: 283 ATR 285 >gi|225551975|ref|ZP_03772915.1| putative protoporphyrinogen oxidase [Borrelia sp. SV1] gi|225370973|gb|EEH00403.1| putative protoporphyrinogen oxidase [Borrelia sp. SV1] Length = 286 Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 55/187 (29%), Positives = 94/187 (50%), Gaps = 20/187 (10%) Query: 47 KHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGT 106 K IH IL ++F + +L+ PR +TE L + AL +I++ +ILDL Sbjct: 60 KGTPIHYILQKKEFMGIEFSLNKHVLIPRFDTECLAEEALI----QIQQNGFKKILDLCC 115 Query: 107 GTGAVCLALLKESPFF---KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG 163 G+G + L++ ++ K + DIS KAL+I + N + + + + S+ ++G Sbjct: 116 GSGCIGLSI----AYYIRKKVILSDISTKALQIVEKNTKKLKLEKFVEIIHSNLLKCIKG 171 Query: 164 LFDVIVSNPPYIESVIVDCLGLEVRD---FDPRISLDG-GIDGLSHYRTIADGVSRHLNK 219 D+I++NPPY+ LE+++ +P +L G G DGL+ R I LN Sbjct: 172 KLDIIITNPPYLNKE-----ELEIKNKIKKEPTKALLGFGKDGLNISRKILSQAKEKLNP 226 Query: 220 DGLCSVE 226 +GL +E Sbjct: 227 NGLIIIE 233 >gi|256380185|ref|YP_003103845.1| modification methylase, HemK family [Actinosynnema mirum DSM 43827] gi|255924488|gb|ACU39999.1| modification methylase, HemK family [Actinosynnema mirum DSM 43827] Length = 261 Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 59/190 (31%), Positives = 88/190 (46%), Gaps = 13/190 (6%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101 + R + + +LGW +F +R+ ++ F PR TE LV A A + + Sbjct: 47 VTRRAAGDPLEHLLGWAEFCGLRIAVAPGVFVPRRRTERLVALAAALAP------PAPVV 100 Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER---FDTLQSDWF 158 LDL G+GA+ AL P + D+ A E A+ N R +D L D Sbjct: 101 LDLCCGSGALGAALAHRLPGARVTAADLDPAAAECARRNLPAPHRVHRGDLYDPLPDD-- 158 Query: 159 SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 + G DV+++N PY+ + + + E RD +PR +LDGG DGL R +A G L Sbjct: 159 --LRGRVDVLLANAPYVPTGAIGLMPPEARDHEPRTALDGGSDGLDVLRRVAAGAPDWLA 216 Query: 219 KDGLCSVEIG 228 + G EIG Sbjct: 217 ERGALLFEIG 226 >gi|301770295|ref|XP_002920605.1| PREDICTED: hemK methyltransferase family member 1-like [Ailuropoda melanoleuca] Length = 358 Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 73/244 (29%), Positives = 112/244 (45%), Gaps = 13/244 (5%) Query: 30 LDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL--- 86 L RQ + R L+ + ILG DF + L + F PRPETE LV+ L Sbjct: 89 LTPRQLQCVQELSSRRLQRMPVQYILGEWDFQGLSLKMVPPVFIPRPETEELVEWVLEEV 148 Query: 87 AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146 A S + + IL++G G+GA+ L+LL + P + + VD A+ + + NA + Sbjct: 149 AQSPCAMGAQGGPLILEVGCGSGAIALSLLSQLPQSRVIAVDKGEAAICLTQENAQRLQL 208 Query: 147 SERFD------TLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199 +R TL+ W + G D++VSNPPYI ++ L E+R ++ ++LDGG Sbjct: 209 LDRIQIVPLDVTLEGSWAHLLTWGPMDLVVSNPPYIFHRDMEQLAPEIRSYEDPLALDGG 268 Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK---LFLVNAFKDYGGN 256 +G+ I L G +E+ V +SR L LV +D+ G Sbjct: 269 EEGMDIITYILALAPWLLKDSGSIFLEVDPRHPELVGSWLQSRPDLSLDLVAVRRDFCGR 328 Query: 257 DRVL 260 R L Sbjct: 329 SRFL 332 >gi|149728859|ref|XP_001493498.1| PREDICTED: similar to HemK methyltransferase family member 1 (M.HsaHemKP) [Equus caballus] Length = 357 Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 69/232 (29%), Positives = 107/232 (46%), Gaps = 13/232 (5%) Query: 46 LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPR---IEKRDVVRIL 102 L+ + ILG DF + L ++ F PRPETE LV+ L R + + IL Sbjct: 104 LQRMPVQYILGEWDFQGLSLKMAPPVFIPRPETEELVEWVLEEVTQRSHVVGAQGGPLIL 163 Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD------TLQSD 156 ++G G+GA+ L+LL + P + + VD A+ + NA + +R TL+ Sbjct: 164 EVGCGSGAISLSLLSQLPQSRVIAVDKGEAAICLTHENAQRLQLQDRIRIMLLDVTLEGS 223 Query: 157 WFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215 W V G D++VSNPPY+ ++ L E+R ++ +LDGG +G+ I S Sbjct: 224 WAHFVPWGPMDLVVSNPPYVFHQDMEQLAPEIRSYEDPAALDGGEEGMDVITHILALASW 283 Query: 216 HLNKDGLCSVEIGYNQKVDVVRIFESRK---LFLVNAFKDYGGNDRVLLFCR 264 L G +E+ + +SR L LV +D+ G R L R Sbjct: 284 LLKDSGSIFLEVDPRHPELIGSWLQSRPDLSLDLVAVRRDFCGRPRFLHIQR 335 >gi|73985650|ref|XP_533816.2| PREDICTED: similar to HemK methyltransferase family member 1 (M.HsaHemKP) [Canis familiaris] Length = 358 Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 74/235 (31%), Positives = 116/235 (49%), Gaps = 15/235 (6%) Query: 44 RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL---AFSLPRIEKRDVVR 100 R L+ + ILG DF + L ++ F PRPETE LV+ L A S + +D Sbjct: 103 RRLQRMPVQYILGEWDFQGLSLKMAPPVFIPRPETEELVEWVLEEVAQSPCAMGTQDGPL 162 Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD------TLQ 154 IL++G G+GA+ L+LL + P + + VD A+ + + NA + +R TL+ Sbjct: 163 ILEVGCGSGAISLSLLSQLPQSRVIAVDKGEAAICLTEENAQRLRLLDRIRIVPLDVTLE 222 Query: 155 SDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213 W + G D++VSNPPYI ++ L E+R ++ ++LDGG +G+ I + Sbjct: 223 GSWAHLLPWGPVDLVVSNPPYIFHQDMEQLAPEIRSYEDPLALDGGEEGMDIIIHIL-AL 281 Query: 214 SRHLNKD-GLCSVEIGYNQKVDVVRIFESRK---LFLVNAFKDYGGNDRVLLFCR 264 +R L KD G +E+ V +S+ L LV +D+ G R L R Sbjct: 282 ARWLLKDSGSIFLEVDPRHPELVGNWLQSQPDLSLDLVAMRRDFCGRPRFLHIQR 336 >gi|294141668|ref|YP_003557646.1| hemK family protein [Shewanella violacea DSS12] gi|293328137|dbj|BAJ02868.1| hemK family protein [Shewanella violacea DSS12] Length = 314 Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 57/176 (32%), Positives = 92/176 (52%), Gaps = 7/176 (3%) Query: 91 PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150 P + + V R+LDL TG+ + +A E + +DIS AL++A+ N GV +R Sbjct: 127 PWLYNKQVNRVLDLCTGSACIAIACAYEFDEAEVDALDISADALDVAQINIENLGVMDRV 186 Query: 151 DTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208 ++SD FS++ +D+IVSNPPY+++ + + E + +P I L G DGL + Sbjct: 187 FPIESDIFSAIPKGPHYDLIVSNPPYVDAEDIGDMPDEYQ-HEPEIGLASGRDGLDLTKR 245 Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 I + ++ DGL VE+G N V ++ F V AF++ G D V + R Sbjct: 246 ILANAADYMTTDGLLVVEVG-NSMVHLMEQFPDVPFTWV-AFEN--GGDGVFVLTR 297 >gi|52425320|ref|YP_088457.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Mannheimia succiniciproducens MBEL55E] gi|52307372|gb|AAU37872.1| HemK protein [Mannheimia succiniciproducens MBEL55E] Length = 344 Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 45/130 (34%), Positives = 75/130 (57%), Gaps = 2/130 (1%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 RILD+ TG+G + +A ++ + VD+S AL +A+ N +SER +QSD F Sbjct: 172 RILDMCTGSGCIAIACAEQFKEAEVDAVDLSIDALNVAEINIDRYNLSERVFPIQSDLFD 231 Query: 160 SVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 +V +D+IVSNPPY++ + + E ++P ++L G+DGL+ + I + +LN Sbjct: 232 NVPADKYDLIVSNPPYVDREDLADMPEEFH-YEPEMALGSGVDGLTITKQILANAANYLN 290 Query: 219 KDGLCSVEIG 228 DG+ E+G Sbjct: 291 DDGVLVCEVG 300 >gi|117619640|ref|YP_856879.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117561047|gb|ABK37995.1| adenine-specific methylase YfcB [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 311 Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 54/176 (30%), Positives = 91/176 (51%), Gaps = 15/176 (8%) Query: 56 GWRDFYNVRLTLSSDTFEPR-PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLA 114 GW + + R+ + PR P E++ + F K + RI+DL TG+G + + Sbjct: 101 GWEFYVDERVLI------PRSPIAEMVANRFAPFL-----KHEPTRIMDLCTGSGCIAII 149 Query: 115 LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS--SVEGLFDVIVSNP 172 + E P + +DIS AL +A+ N +G+ ++ ++SD F V +D+IVSNP Sbjct: 150 MAHEFPEAEVDAIDISVDALNVAERNINDHGLEQQVIPIRSDLFRDLPVGDKYDLIVSNP 209 Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228 PY++S + L E R +P ++L G DGL + + + L +DG+ VE+G Sbjct: 210 PYVDSEDMSDLPDEFR-HEPELALASGSDGLKLTKRLLANAADFLKEDGVLVVEVG 264 >gi|222111086|ref|YP_002553350.1| n5-glutamine s-adenosyl-l-methionine-dependent methyltransferase [Acidovorax ebreus TPSY] gi|221730530|gb|ACM33350.1| methyltransferase small [Acidovorax ebreus TPSY] Length = 309 Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 49/168 (29%), Positives = 86/168 (51%), Gaps = 9/168 (5%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LDL TG G++ + P + G D+S AL +A+ N +G+ ER ++SD ++ Sbjct: 137 VLDLCTGNGSLAVLAAMAYPDVQVTGADLSPDALAVARINVERHGLQERITLVESDGLAA 196 Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD----GGIDGLSHYRTIADGVSRH 216 + G +D+I+ NPPY+ + + L E R +P ++L GG DG+ R + Sbjct: 197 LPGPWDLILCNPPYVNAASMAQLPPEYR-AEPELALSGNMRGGRDGMDFIRQLLADAPAR 255 Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 +++D + +EIG N++ F +F + G+D+VLL R Sbjct: 256 MSEDAVLVLEIG-NEREHFETAFPDLPVFW---LETSAGSDQVLLLTR 299 >gi|320540077|ref|ZP_08039732.1| N5-glutamine methyltransferase [Serratia symbiotica str. Tucson] gi|320029743|gb|EFW11767.1| N5-glutamine methyltransferase [Serratia symbiotica str. Tucson] Length = 310 Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 59/192 (30%), Positives = 96/192 (50%), Gaps = 10/192 (5%) Query: 74 PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133 PR L++ LP + +R ILD+ TG+G + +A P + VDIS + Sbjct: 113 PRSPIGELINDRFNALLPHLPQR----ILDMCTGSGCIAIACGNAFPEAEVDAVDISNEV 168 Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDP 192 L + + N +GV + ++SD F V + +D+IV+NPPY+++ + L E R F+P Sbjct: 169 LVVTERNIQAHGVEHQVIPIRSDLFRDVPAIQYDLIVTNPPYVDAQDMSDLPQEFR-FEP 227 Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKD 252 ++ L G DGL R I +L+ DG+ E+G N V ++ + F AFK+ Sbjct: 228 KLGLAAGDDGLKLVRRILACAPDYLSDDGVLICEVG-NSMVHLMEQYPDIP-FTWLAFKN 285 Query: 253 YGGNDRVLLFCR 264 G D V + + Sbjct: 286 --GGDGVFMLTK 295 >gi|317504377|ref|ZP_07962361.1| protein-(glutamine-N5) methyltransferase [Prevotella salivae DSM 15606] gi|315664499|gb|EFV04182.1| protein-(glutamine-N5) methyltransferase [Prevotella salivae DSM 15606] Length = 291 Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 64/222 (28%), Positives = 106/222 (47%), Gaps = 15/222 (6%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL-AFSLP--RIEKRDVVRILDLGTG 107 + + G F+ ++ PRPETE+L ++ L A++ P ++ +R+LD+GTG Sbjct: 70 VQYVTGTARFFGRDYVVNPHVLIPRPETEVLCETILSAYNQPYCALQPPAPLRVLDIGTG 129 Query: 108 TGAVCLALLKESPFFKGVGVDISCKALEIAKSNA--VTNGVS-ERFDTLQSDWFSSVEGL 164 +G + + L + D+S +AL A+ NA + V+ E D L D + Sbjct: 130 SGCIAVTLALDLWNSSVSAWDVSGEALLTARENAHRLQAQVNFEWHDVLSLDEAALAATP 189 Query: 165 FDVIVSNPPYIESVIVDC----LGLEVRDFDPRISL-DGGIDGLSHYRTIADGVSRHLNK 219 FD+IVSNPPY+ DC + +V +P +L D L YR IAD HLN Sbjct: 190 FDIIVSNPPYV----CDCERKDMTEQVLAHEPHTALFVPDNDPLLFYRAIADYGVTHLNP 245 Query: 220 DGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 GL + EI + ++ E + + +D G +R+++ Sbjct: 246 HGLLAFEINPIYAEETCKMLEHMGYEQIESKEDQYGKERIVI 287 >gi|107028787|ref|YP_625882.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Burkholderia cenocepacia AU 1054] gi|116690054|ref|YP_835677.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Burkholderia cenocepacia HI2424] gi|170733388|ref|YP_001765335.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Burkholderia cenocepacia MC0-3] gi|105897951|gb|ABF80909.1| [LSU ribosomal protein L3P]-glutamine N5-methyltransferase [Burkholderia cenocepacia AU 1054] gi|116648143|gb|ABK08784.1| [LSU ribosomal protein L3P]-glutamine N5-methyltransferase [Burkholderia cenocepacia HI2424] gi|169816630|gb|ACA91213.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Burkholderia cenocepacia MC0-3] Length = 302 Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 58/178 (32%), Positives = 88/178 (49%), Gaps = 16/178 (8%) Query: 94 EKRDVVRILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVSERFD 151 + V +L+L TG+G CLA+L S F VD+S KALE+A+ N G+ +R Sbjct: 123 DPEQVGAVLELCTGSG--CLAILAASAFPNAEIDAVDLSDKALEVAEINVRDYGLEDRIG 180 Query: 152 TLQSDWFSSVEGL-------FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204 + D ++ + +DVI++NPPY+ + + L E R +P ++L GG DG+ Sbjct: 181 LHRGDLYAPLPAFRTDPDSRYDVILTNPPYVNAASMAALPPEYR-HEPEMALAGGDDGMD 239 Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262 R I R L+ DG+ VEIG N++ V F +L G+D V L Sbjct: 240 IVRRIVAEAHRWLHDDGVLVVEIG-NEREHVEAAFGGLEL---TWLPTSAGDDAVFLI 293 >gi|172060980|ref|YP_001808632.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Burkholderia ambifaria MC40-6] gi|171993497|gb|ACB64416.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Burkholderia ambifaria MC40-6] Length = 302 Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 57/178 (32%), Positives = 88/178 (49%), Gaps = 16/178 (8%) Query: 94 EKRDVVRILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVSERFD 151 + V +L+L TG+G CLA+L S F VD+S KALE+A+ N G+ +R Sbjct: 123 DPEQVGAVLELCTGSG--CLAILAASAFPNAEIDAVDLSDKALEVARINVSDYGLDDRIT 180 Query: 152 TLQSDWFSSVEGL-------FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204 + D ++ + +DVI++NPPY+ + + L E R +P ++L GG DG+ Sbjct: 181 LHRGDLYAPLPAFRAEPDARYDVILTNPPYVNATSMAALPPEYR-HEPEMALAGGEDGMD 239 Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262 R I + L+ DG+ VEIG N++ V F +L G+D V L Sbjct: 240 IVRRIISEAHKWLHDDGVLVVEIG-NEREHVEAAFGGLEL---TWLPTSAGDDTVFLI 293 >gi|297538015|ref|YP_003673784.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Methylotenera sp. 301] gi|297257362|gb|ADI29207.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Methylotenera sp. 301] Length = 301 Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 50/165 (30%), Positives = 90/165 (54%), Gaps = 10/165 (6%) Query: 103 DLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 D+ TG+G CL +L S F +DIS A+++A N + E+ ++SD F++ Sbjct: 140 DICTGSG--CLGILLASVFPNAEIDVIDISQDAIDVANINIANYSLQEQVTAIKSDMFTA 197 Query: 161 VEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 ++G +D+I+SNPPY+++ + L E ++ +P+++L G GL H TI + +LN Sbjct: 198 LKGKKYDLIISNPPYVDAPSMAALPQEYQN-EPQLALGSGDAGLDHTHTILREAANYLND 256 Query: 220 DGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 G+ VEIG+N++ + + + N + GN+ V L + Sbjct: 257 GGILIVEIGHNREA----LEAAYPNIIFNWLEVSSGNEFVFLLTK 297 >gi|224532844|ref|ZP_03673459.1| putative protoporphyrinogen oxidase [Borrelia burgdorferi WI91-23] gi|224512233|gb|EEF82619.1| putative protoporphyrinogen oxidase [Borrelia burgdorferi WI91-23] Length = 286 Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 54/183 (29%), Positives = 95/183 (51%), Gaps = 20/183 (10%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110 IH IL ++F + +L+ PR +TE LV+ AL +I++ +ILDL G+G Sbjct: 64 IHYILQKKEFMGIEFSLNRHVLIPRFDTECLVEEALI----QIQQNGFKKILDLCCGSGC 119 Query: 111 VCLALLKESPFF---KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDV 167 + L++ ++ K + DIS KAL+I + N + + + + S+ ++G D+ Sbjct: 120 IGLSI----AYYIRKKVILSDISTKALQIVEKNTKKLKLEKFVEIIHSNLLKCIKGKLDI 175 Query: 168 IVSNPPYIESVIVDCLGLEVRD---FDPRISLDG-GIDGLSHYRTIADGVSRHLNKDGLC 223 I++NPPY+ LE+++ +P +L G G DGL+ R I + L+ +GL Sbjct: 176 IITNPPYLNKE-----ELEIKNKIKKEPTKALLGFGKDGLNISRKILNQAKEKLSPNGLI 230 Query: 224 SVE 226 +E Sbjct: 231 IIE 233 >gi|194366630|ref|YP_002029240.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Stenotrophomonas maltophilia R551-3] gi|194349434|gb|ACF52557.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Stenotrophomonas maltophilia R551-3] Length = 309 Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 52/148 (35%), Positives = 78/148 (52%), Gaps = 13/148 (8%) Query: 91 PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150 P + RDV R LDL TG+G + +A+ P ++ GVD+S AL +A N ER Sbjct: 123 PWLAGRDVSRALDLCTGSGCIAIAMGHYYPNWEVDGVDLSDDALSLATEN------KERL 176 Query: 151 DT-----LQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204 L+SD F+ + G +D+IV+NPPY+ + D L E ++P + L G DGL Sbjct: 177 QAHNVTLLKSDLFNGLTGRHYDLIVTNPPYVTNDETDALPQEY-SYEPDMGLRAGDDGLD 235 Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQK 232 I HL++DGL E+G +++ Sbjct: 236 LVLKILRDAPLHLSEDGLLICEVGESEQ 263 >gi|293608153|ref|ZP_06690456.1| modification methylase [Acinetobacter sp. SH024] gi|292828726|gb|EFF87088.1| modification methylase [Acinetobacter sp. SH024] gi|325122117|gb|ADY81640.1| putative adenine-specific methylase [Acinetobacter calcoaceticus PHEA-2] Length = 335 Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 46/131 (35%), Positives = 73/131 (55%), Gaps = 3/131 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 RILD+ TG+G + +AL P + DIS +ALE+A N + + L+SD F+ Sbjct: 159 RILDMCTGSGCIAVALAYAYPDAEVDATDISKEALEVASINVEHHNKQYQVALLESDLFA 218 Query: 160 SV--EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217 + E +D+IVSNPPY+++ + L E +P ++L G DGL R + + +L Sbjct: 219 KIPAENQYDLIVSNPPYVDAEDMADLPEEFL-HEPELALAAGQDGLDLVRKMLAQAADYL 277 Query: 218 NKDGLCSVEIG 228 +DGL +E+G Sbjct: 278 TEDGLIVIEVG 288 >gi|209886321|ref|YP_002290178.1| protein-(glutamine-N5) methyltransferase [Oligotropha carboxidovorans OM5] gi|209874517|gb|ACI94313.1| protein-(glutamine-N5) methyltransferase [Oligotropha carboxidovorans OM5] Length = 324 Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 47/134 (35%), Positives = 72/134 (53%), Gaps = 6/134 (4%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVSERFDTLQS 155 V R+LDL TG+G CLA+L F+ VDIS AL +A N G+ +R + Sbjct: 158 VSRVLDLCTGSG--CLAILAAQTFYNASVEAVDISKDALAVAAKNVADYGLEDRIALHRG 215 Query: 156 DWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214 + F+ + + +D+I+SNPPY+++ + L E R +P+++ DGG DG+ R I Sbjct: 216 NLFAPLGDARYDLIISNPPYVDAEGMSSLPPECR-HEPKLAFDGGRDGIDIVRRIVSEAG 274 Query: 215 RHLNKDGLCSVEIG 228 HL G E+G Sbjct: 275 AHLTPQGGLLCEVG 288 >gi|94676616|ref|YP_588804.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] gi|94219766|gb|ABF13925.1| protein-(glutamine-N5) methyltransferase [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] Length = 311 Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 58/203 (28%), Positives = 91/203 (44%), Gaps = 8/203 (3%) Query: 60 FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119 F N+ + PR L+ LP+ + ILD+ TG+G + +A+ Sbjct: 99 FCNLEFYVDKRVLIPRSPIGELIQDNFRNLLPQTP----LHILDMCTGSGCIAIAIAYLY 154 Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESV 178 P K VDIS ALE+ N + + R + SD FS + L +D+IV+NPPY++ Sbjct: 155 PEAKIDAVDISIDALEVTWHNIKQHELENRVYPICSDLFSELSPLCYDLIVANPPYVDEK 214 Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238 + L LE +P ++L G DGL R I R+L+ G+ E+G ++ Sbjct: 215 SMKHLPLEFYA-EPVLALIAGKDGLEFIRRILACAPRYLSSHGILICEVGSTTMTTLIEQ 273 Query: 239 FESRKLFLVNAFKDYGGNDRVLL 261 + + F F GG +L Sbjct: 274 YPTVPFFWFELFN--GGEGIFML 294 >gi|85716035|ref|ZP_01047012.1| modification methylase HemK [Nitrobacter sp. Nb-311A] gi|85697233|gb|EAQ35114.1| modification methylase HemK [Nitrobacter sp. Nb-311A] Length = 340 Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 47/134 (35%), Positives = 72/134 (53%), Gaps = 6/134 (4%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVSERFDTLQS 155 + R+LDL TG+G CLA+L F D+S AL +A N +G+ R Q Sbjct: 170 ITRVLDLCTGSG--CLAILAARAFPNATVDATDLSAGALAVAARNVHEHGLDGRIQLAQG 227 Query: 156 DWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214 D F++V+ +D+I+SNPPY+++ + L E +PR++ DGG +G+ R I DG Sbjct: 228 DLFAAVKNKRYDLIISNPPYVDAKGMAGLPRECL-AEPRMAFDGGAEGIDLVRRIIDGAE 286 Query: 215 RHLNKDGLCSVEIG 228 +L G E+G Sbjct: 287 SYLAPAGGLLCEVG 300 >gi|261820752|ref|YP_003258858.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Pectobacterium wasabiae WPP163] gi|261604765|gb|ACX87251.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Pectobacterium wasabiae WPP163] Length = 310 Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 50/156 (32%), Positives = 79/156 (50%), Gaps = 6/156 (3%) Query: 74 PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133 PR L+++ LP+ ILDL TG+G + +A + P + VDIS A Sbjct: 113 PRSPIGELINNYFDEQLPKAPNH----ILDLCTGSGCIAIACAQAFPEAEVDAVDISSDA 168 Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDP 192 L + + N +G+ R ++SD F + + +D+IV+NPPY++ + L E R F+P Sbjct: 169 LAVTEQNIQQHGLEYRVTPIRSDLFRDLPAIRYDLIVTNPPYVDEEDMSDLPQEFR-FEP 227 Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228 + L G DGL R I +L+ DG+ E+G Sbjct: 228 ELGLAAGNDGLDLVRRILACAPDYLSDDGVLICEVG 263 >gi|332140707|ref|YP_004426445.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Alteromonas macleodii str. 'Deep ecotype'] gi|327550729|gb|AEA97447.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Alteromonas macleodii str. 'Deep ecotype'] Length = 324 Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 51/142 (35%), Positives = 75/142 (52%), Gaps = 3/142 (2%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 ILD+ TG + +AL P + VDIS ALE+A N +G+S R +QSD F Sbjct: 152 ANILDMCTGGACIAIALAHAYPEAQVDAVDISTDALEVADINIQEHGLSHRVYPIQSDLF 211 Query: 159 SSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217 SS+ G +D+IV+NPPY+++ + L E +P ++L G DGL + +L Sbjct: 212 SSLAGQKYDLIVTNPPYVDAEDMADLPEEYH-HEPELALAAGDDGLDLVDIMLKEAPTYL 270 Query: 218 NKDGLCSVEIGYNQKVDVVRIF 239 N G VE+G N +V + F Sbjct: 271 NDGGWLFVEVG-NSEVHMSERF 291 >gi|261209854|ref|ZP_05924155.1| hypothetical adenine-specific methylase yfcB [Vibrio sp. RC341] gi|260841040|gb|EEX67565.1| hypothetical adenine-specific methylase yfcB [Vibrio sp. RC341] Length = 310 Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 43/134 (32%), Positives = 74/134 (55%), Gaps = 2/134 (1%) Query: 96 RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155 + RI+DL TG+G + +A P + +DIS AL++A+ N +G+ ++ ++S Sbjct: 131 EEPTRIMDLCTGSGCIAIACANAFPEAEVDAIDISADALQVAEQNIQDHGLEQQVFPIRS 190 Query: 156 DWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214 D F + + +D+IV+NPPY++ +D L E R +P + L G DGL R I Sbjct: 191 DLFRDLPQEQYDLIVTNPPYVDQEDMDSLPSEFR-HEPELGLAAGSDGLKLARRILANAP 249 Query: 215 RHLNKDGLCSVEIG 228 +L ++G+ E+G Sbjct: 250 LYLKENGVLVCEVG 263 >gi|256827313|ref|YP_003151272.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Cryptobacterium curtum DSM 15641] gi|256583456|gb|ACU94590.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Cryptobacterium curtum DSM 15641] Length = 377 Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 55/173 (31%), Positives = 88/173 (50%), Gaps = 16/173 (9%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 +R +D TGTG + +L +E P + DIS +A +A NA VS+R D + + Sbjct: 200 LRFVDACTGTGCIAASLAREVPSSSIIATDISAEACALAAENAADLSVSDRVDVVSCNVL 259 Query: 159 SSV----EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214 V +G D+++SNPPYI + ++ + EV F+PR++LDGG DGL +R + D Sbjct: 260 DGVDPNWQGTVDLVISNPPYIPTDVLQSIDQEVTAFEPRLALDGGEDGLDVFRRLLDQAP 319 Query: 215 RHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAF------KDYGGNDRVLL 261 L G+ +VE+ + + ++R L F +D G RVL+ Sbjct: 320 ALLVPGGVLAVELHEDC------LSQARSLAAAAGFDDIRIAQDLAGRPRVLI 366 Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust. Identities = 25/89 (28%), Positives = 38/89 (42%) Query: 7 SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66 + + G S + D D L +R L R E + I G DF + + Sbjct: 39 AQWLVSEALGCSRIALYADIDRPLSAEERTILREYTRRRAAGEPLQYITGSVDFRFITIK 98 Query: 67 LSSDTFEPRPETELLVDSALAFSLPRIEK 95 + PRPETE+L+ AL+ PRI++ Sbjct: 99 VRPGVLIPRPETEVLMSEALSELKPRIDE 127 >gi|218132000|ref|ZP_03460804.1| hypothetical protein BACEGG_03623 [Bacteroides eggerthii DSM 20697] gi|217985876|gb|EEC52216.1| hypothetical protein BACEGG_03623 [Bacteroides eggerthii DSM 20697] Length = 282 Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 77/264 (29%), Positives = 107/264 (40%), Gaps = 12/264 (4%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 +A S C + G ++ + D +L ++ L + R L E I I G F Sbjct: 24 EAANLSRIVCCEMLGQTTIDYYLGKDIILSSKEMQKLNGILARLLNFEPIQYIQGTARFL 83 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 ++ PRPETE LV+ L E RILD+GTG+G + ++L K P Sbjct: 84 ERSYHVAPGVLIPRPETEELVEVMLR------EISSDARILDIGTGSGCIAISLSKAFPN 137 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESV 178 K D+S AL IA+ N S F D L W +DVIVSNPPYI Sbjct: 138 AKVTAWDVSEDALCIARRNNDDLQASVCFVKQDVLA--WGGDGGQCYDVIVSNPPYITES 195 Query: 179 IVDCLGLEVRDFDPRISL-DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237 + V D++P +L D L YR I + L G EI Sbjct: 196 EKQEMERNVLDWEPFSALFVPNNDPLLFYRRIGELGRMMLVDGGRLYFEINRAYGEATAM 255 Query: 238 IFESRKLFLVNAFKDYGGNDRVLL 261 + + + KD GNDR ++ Sbjct: 256 MLCGQGYTGIRILKDISGNDRFVI 279 >gi|206560466|ref|YP_002231230.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Burkholderia cenocepacia J2315] gi|198036507|emb|CAR52404.1| putative DNA methylase [Burkholderia cenocepacia J2315] Length = 302 Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 58/178 (32%), Positives = 87/178 (48%), Gaps = 16/178 (8%) Query: 94 EKRDVVRILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVSERFD 151 + V +L+L TG+G CLA+L S F VD+S KALE+A N G+ +R Sbjct: 123 DPEQVGAVLELCTGSG--CLAILAASAFPNAEIDAVDLSDKALEVAAINVRDYGLEDRIG 180 Query: 152 TLQSDWFSSVEGL-------FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204 + D ++ + +DVI++NPPY+ + + L E R +P ++L GG DG+ Sbjct: 181 LHRGDLYAPLPAFRTDPDSRYDVILTNPPYVNAASMAALPPEYR-HEPEMALAGGDDGMD 239 Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262 R I R L+ DG+ VEIG N++ V F +L G+D V L Sbjct: 240 IVRRIVAEAHRWLHDDGVLVVEIG-NEREHVEAAFGGLEL---TWLPTSAGDDAVFLI 293 >gi|255683365|ref|NP_598745.2| hemK methyltransferase family member 1 [Mus musculus] gi|168984587|emb|CAQ12135.1| HemK methyltransferase family member 1 [Mus musculus] Length = 340 Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 72/235 (30%), Positives = 110/235 (46%), Gaps = 23/235 (9%) Query: 44 RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPR---IEKRDVVR 100 R L+ + ILG DF + L + F PRPETE LV+ L R + +D Sbjct: 104 RRLQRMPVQYILGEWDFQGLSLKMVPPVFIPRPETEELVEWVLEEVAQRPHAVRAQDGPL 163 Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 IL++G G+GA+ L+LL + P + V VD A+ + NA + +R + D S Sbjct: 164 ILEVGCGSGAITLSLLSQLPKSRVVAVDKEEAAVSLTHENAQRLQLQDRIRIIHLDITS- 222 Query: 161 VEGL---------FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL---SHYRT 208 EG D++VSNPPYI ++ L E+ ++ ++LDGG +G+ +H T Sbjct: 223 -EGCCTHLLPWSPLDLVVSNPPYIFRKDMEQLAPEICSYEDLVALDGGDEGMDIITHILT 281 Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK---LFLVNAFKDYGGNDRVL 260 +A + LN G +E+ V +S L LV +D+ G R L Sbjct: 282 LAPQL---LNASGSIFLEVDPRHPELVSSWLQSHPDLHLSLVGVREDFCGRPRFL 333 >gi|325518136|gb|EGC97920.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Burkholderia sp. TJI49] Length = 302 Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 58/178 (32%), Positives = 86/178 (48%), Gaps = 16/178 (8%) Query: 94 EKRDVVRILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVSERFD 151 + V +L+L TG+G CLA+L S F VD+S KALE+A N G+ +R Sbjct: 123 DPEQVGAVLELCTGSG--CLAILAASAFPNAEIDAVDLSDKALEVAAINVQDYGLGDRIT 180 Query: 152 TLQSDWFSSVEGL-------FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204 + D ++ + +DVI++NPPY+ + + L E R +P ++L GG DG+ Sbjct: 181 LHRGDLYAPLPAFRAEPDTRYDVILTNPPYVNAASMAALPPEYR-HEPEMALAGGDDGMD 239 Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262 R I R L+ DG+ VEIG N++ V F +L G D V L Sbjct: 240 IVRRIVADAHRWLHDDGVLVVEIG-NEREHVEAAFGGLEL---TWLPTSAGEDSVFLI 293 >gi|293391987|ref|ZP_06636321.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Aggregatibacter actinomycetemcomitans D7S-1] gi|290952521|gb|EFE02640.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Aggregatibacter actinomycetemcomitans D7S-1] Length = 316 Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 54/169 (31%), Positives = 86/169 (50%), Gaps = 7/169 (4%) Query: 74 PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133 PR L+ A LP+ KR ILD+ TG+G + +A ++ P VD+S A Sbjct: 123 PRSPIGALIQDGFAGLLPKAPKR----ILDMCTGSGCIAIACAEQFPEADVDAVDLSLDA 178 Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSS-VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDP 192 L +A+ N +S R +QSD FS +E +D+IV+NPPY++ + E ++P Sbjct: 179 LNVAEINIERYNLSHRVFPIQSDLFSQLLEEQYDLIVTNPPYVDLDDRSDMPEEFH-YEP 237 Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 ++L G DGL+ + I +L DG+ E+G N V ++ F + Sbjct: 238 EMALGSGDDGLTITKQILRQAVNYLTDDGVLVCEVG-NSMVHLIEQFPN 285 >gi|109897861|ref|YP_661116.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Pseudoalteromonas atlantica T6c] gi|109700142|gb|ABG40062.1| [LSU ribosomal protein L3P]-glutamine N5-methyltransferase [Pseudoalteromonas atlantica T6c] Length = 309 Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 48/134 (35%), Positives = 73/134 (54%), Gaps = 2/134 (1%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 ILDL TG G + +AL VDIS +ALE+A+ N + +S+R +QSD Sbjct: 139 THILDLCTGGGCIAIALAYAFESATVDAVDISPEALEVAEMNIHEHQLSDRVYPIQSDLM 198 Query: 159 SSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217 +++EG +D+I+SNPPY+++ + L E +P ++L G DGL + HL Sbjct: 199 AALEGQKYDLIISNPPYVDAEDMADLPEEFH-HEPELALAAGDDGLDLVHKMLRQAPAHL 257 Query: 218 NKDGLCSVEIGYNQ 231 DG VE+G +Q Sbjct: 258 TDDGWLFVEVGNSQ 271 >gi|262279012|ref|ZP_06056797.1| conserved hypothetical protein [Acinetobacter calcoaceticus RUH2202] gi|262259363|gb|EEY78096.1| conserved hypothetical protein [Acinetobacter calcoaceticus RUH2202] Length = 334 Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 46/131 (35%), Positives = 73/131 (55%), Gaps = 3/131 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 RILD+ TG+G + +AL P + DIS +ALE+A N + + L+SD F+ Sbjct: 159 RILDMCTGSGCIAVALAYAYPDAEIDATDISKEALEVASINTEHHNKQYQVALLESDLFA 218 Query: 160 SV--EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217 + E +D+IVSNPPY+++ + L E +P ++L G DGL R + + +L Sbjct: 219 KIPAENQYDLIVSNPPYVDAEDMADLPEEFL-HEPELALAAGQDGLDLVRKMLAQAADYL 277 Query: 218 NKDGLCSVEIG 228 +DGL +E+G Sbjct: 278 TEDGLIVIEVG 288 >gi|299067442|emb|CBJ38641.1| putative adenine-specific methylase [Ralstonia solanacearum CMR15] Length = 300 Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 55/168 (32%), Positives = 85/168 (50%), Gaps = 11/168 (6%) Query: 101 ILDLGTGTGAVCLALLK--ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 +L+L TG+G CLA+L + P VD+S AL +A+ N G+++ + D + Sbjct: 137 VLELCTGSG--CLAILAALQWPNATLDAVDLSPDALVVAQRNVDNYGLNDSIRLHEGDLY 194 Query: 159 SSVEG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216 + + +DVI++NPPY+ + L E R +PR++L GG DG+ R I RH Sbjct: 195 APLPPGVHYDVILTNPPYVNETSMQALPPEYR-AEPRMALAGGTDGMDIVRRILADAPRH 253 Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 L G+ VEIG N++ +V F L G+D+V L R Sbjct: 254 LKPHGVLVVEIG-NERENVEAAFPDLDLVW---LPTSAGDDQVFLVTR 297 >gi|262404464|ref|ZP_06081019.1| hypothetical adenine-specific methylase yfcB [Vibrio sp. RC586] gi|262349496|gb|EEY98634.1| hypothetical adenine-specific methylase yfcB [Vibrio sp. RC586] Length = 310 Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 43/134 (32%), Positives = 74/134 (55%), Gaps = 2/134 (1%) Query: 96 RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155 + RI+DL TG+G + +A P + +DIS AL++A+ N +G+ ++ ++S Sbjct: 131 EEPTRIMDLCTGSGCIAIACANAFPEAEVDAIDISVDALQVAEQNIQDHGLEQQVFPIRS 190 Query: 156 DWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214 D F + + +D+IV+NPPY++ +D L E R +P + L G DGL R I Sbjct: 191 DLFRDLPQEQYDLIVTNPPYVDQEDMDSLPSEFR-HEPELGLAAGSDGLKLARRILANAP 249 Query: 215 RHLNKDGLCSVEIG 228 +L ++G+ E+G Sbjct: 250 LYLKENGILVCEVG 263 >gi|317474401|ref|ZP_07933675.1| protein-(glutamine-N5) methyltransferase [Bacteroides eggerthii 1_2_48FAA] gi|316909082|gb|EFV30762.1| protein-(glutamine-N5) methyltransferase [Bacteroides eggerthii 1_2_48FAA] Length = 278 Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 77/264 (29%), Positives = 107/264 (40%), Gaps = 12/264 (4%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 +A S C + G ++ + D +L ++ L + R L E I I G F Sbjct: 20 EAANLSRIVCCEMLGQTTIDYYLGKDIILSSKEMQKLNGILARLLNFEPIQYIQGTARFL 79 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 ++ PRPETE LV+ L E RILD+GTG+G + ++L K P Sbjct: 80 ERSYHVAPGVLIPRPETEELVEVMLR------EIPSDARILDIGTGSGCIAISLSKAFPN 133 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESV 178 K D+S AL IA+ N S F D L W +DVIVSNPPYI Sbjct: 134 AKVTAWDVSEDALCIARRNNDDLQASVCFVKQDVLA--WRGDGGQCYDVIVSNPPYITES 191 Query: 179 IVDCLGLEVRDFDPRISL-DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237 + V D++P +L D L YR I + L G EI Sbjct: 192 EKQEMERNVLDWEPFSALFVPNNDPLLFYRRIGELGRMMLVDGGRLYFEINRAYGEATAM 251 Query: 238 IFESRKLFLVNAFKDYGGNDRVLL 261 + + + KD GNDR ++ Sbjct: 252 MLCGQGYTGIRILKDISGNDRFVI 275 >gi|261868313|ref|YP_003256235.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Aggregatibacter actinomycetemcomitans D11S-1] gi|261413645|gb|ACX83016.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Aggregatibacter actinomycetemcomitans D11S-1] Length = 316 Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 54/169 (31%), Positives = 86/169 (50%), Gaps = 7/169 (4%) Query: 74 PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133 PR L+ A LP+ KR ILD+ TG+G + +A ++ P VD+S A Sbjct: 123 PRSPIGALIQDGFAGLLPKAPKR----ILDMCTGSGCIAIACAEQFPEADVDAVDLSLDA 178 Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDP 192 L +A+ N +S R +QSD FS + +D+IV+NPPY++ + E ++P Sbjct: 179 LNVAEINIERYNLSRRVFPIQSDLFSQLLAEQYDLIVTNPPYVDLDDRSDMPEEFH-YEP 237 Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 ++L G DGL+ + I + +L DG+ E+G N V ++ F S Sbjct: 238 EMALGSGDDGLTITKQILRQAANYLTDDGVLVCEVG-NSMVHLIEQFPS 285 >gi|94499014|ref|ZP_01305552.1| ribosomal protein L3P methyltransferase [Oceanobacter sp. RED65] gi|94428646|gb|EAT13618.1| ribosomal protein L3P methyltransferase [Oceanobacter sp. RED65] Length = 305 Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 45/129 (34%), Positives = 75/129 (58%), Gaps = 1/129 (0%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 RILDL G+G + +A L+ P + D+S AL++A+ N +G+ ++ +QSD F+ Sbjct: 134 RILDLCCGSGCIGIASLQAFPDAQLDLADLSRDALDVAEINIDHHGLWQQVAAIQSDLFN 193 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 ++ +D+IVSNPPY++ + + E + +P + L G+DGL R I + +LN Sbjct: 194 ELQPGYDLIVSNPPYVDEEDLSAMPDEYQ-HEPAMGLGSGVDGLDITRKILAQAADYLND 252 Query: 220 DGLCSVEIG 228 GL VE+G Sbjct: 253 GGLLVVEVG 261 >gi|260554187|ref|ZP_05826445.1| protein-(glutamine-N5) methyltransferase [Acinetobacter sp. RUH2624] gi|260404693|gb|EEW98205.1| protein-(glutamine-N5) methyltransferase [Acinetobacter sp. RUH2624] Length = 334 Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 46/131 (35%), Positives = 73/131 (55%), Gaps = 3/131 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 RILD+ TG+G + +AL P + DIS +ALE+A N + + L+SD F+ Sbjct: 159 RILDMCTGSGCIAVALAYAYPDAEVDATDISKEALEVASINVEHHNKQYQVALLESDLFA 218 Query: 160 SV--EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217 + E +D+IVSNPPY+++ + L E +P ++L G DGL R + + +L Sbjct: 219 KIPAENQYDLIVSNPPYVDAEDMADLPEEFL-HEPELALAAGQDGLDLVRKMLAQAADYL 277 Query: 218 NKDGLCSVEIG 228 +DGL +E+G Sbjct: 278 TEDGLIVIEVG 288 >gi|77747543|ref|NP_298657.2| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Xylella fastidiosa 9a5c] Length = 308 Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 50/150 (33%), Positives = 81/150 (54%), Gaps = 4/150 (2%) Query: 91 PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150 P + RDV LDL TG+G + +A+ +P + G DIS AL +A N V ++ Sbjct: 123 PWLAGRDVRHALDLCTGSGCIAIAMGHYNPHWSVDGADISEDALSLALENKV-RLLAHNV 181 Query: 151 DTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209 + ++SD F+ + G + +IVSNPPY+ D L E ++P + L G DGL+ I Sbjct: 182 ELIKSDVFAGLVGRRYQLIVSNPPYVTDAETDALPQEY-GYEPELGLRAGPDGLNLVLKI 240 Query: 210 ADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 HL+++GL E+G +++ +VR+ Sbjct: 241 LRDAPAHLDEEGLLICEVGESEQ-QLVRLL 269 >gi|78066811|ref|YP_369580.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Burkholderia sp. 383] gi|77967556|gb|ABB08936.1| [LSU ribosomal protein L3P]-glutamine N5-methyltransferase [Burkholderia sp. 383] Length = 302 Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 58/178 (32%), Positives = 89/178 (50%), Gaps = 16/178 (8%) Query: 94 EKRDVVRILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVSERFD 151 + V +L+L TG+G CLA+L S F VD+S KALE+A+ N G+ +R Sbjct: 123 DPEQVGAVLELCTGSG--CLAILAASAFPNAEIDAVDLSDKALEVAEINVRDYGLEDRVG 180 Query: 152 TLQSDWFSSVEGL-------FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204 + D ++ + +DVI++NPPY+ + + L E R +P ++L GG DG+ Sbjct: 181 LHRGDLYAPLPAFRTDPGSRYDVILTNPPYVNASSMAALPPEYR-HEPEMALAGGDDGMD 239 Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262 R I R L+ DG+ VEIG N++ +V F +L G+D V L Sbjct: 240 IVRRIVAEAHRWLHDDGVLVVEIG-NERENVEAAFGGLEL---TWLPTSAGDDAVFLI 293 >gi|253689188|ref|YP_003018378.1| modification methylase, HemK family [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251755766|gb|ACT13842.1| modification methylase, HemK family [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 310 Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 50/156 (32%), Positives = 79/156 (50%), Gaps = 6/156 (3%) Query: 74 PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133 PR L+++ LP+ ILDL TG+G + +A + P + VDIS A Sbjct: 113 PRSPIGELINNYFDEQLPKAPNH----ILDLCTGSGCIAIACAQAFPEAEVDAVDISSDA 168 Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDP 192 L + + N +G+ R ++SD F + + +D+IV+NPPY++ + L E R F+P Sbjct: 169 LAVTEQNIQQHGLEYRVTPIRSDLFRDLPAIRYDLIVTNPPYVDEEDMSDLPQEFR-FEP 227 Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228 + L G DGL R I +L+ DG+ E+G Sbjct: 228 ELGLAAGNDGLDLVRRILACAPDYLSDDGVLICEVG 263 >gi|308177037|ref|YP_003916443.1| methylase of peptide chain release factors [Arthrobacter arilaitensis Re117] gi|307744500|emb|CBT75472.1| putative methylase of peptide chain release factors [Arthrobacter arilaitensis Re117] Length = 285 Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 66/257 (25%), Positives = 106/257 (41%), Gaps = 7/257 (2%) Query: 6 DSHSFLCRVTGLSSHQVIVDP--DSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63 D+ LC V G+S ++ + D R T + + + G F + Sbjct: 26 DADLLLCHVLGISRSELKLRQMRGDAFDPAYRQQFTELVAARRTRIPLQHLTGVAHFRYL 85 Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 L + F PRPETE +V + + + D R +DL +G+GA+ AL E P Sbjct: 86 ELKVGPGVFIPRPETETVVQQGIDYL--HAQGIDNPRCIDLCSGSGAIAAALASEVPGSS 143 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183 V++S +A+ ++N + V+ S + + G D+++SNPPYI + Sbjct: 144 VWAVELSEQAIGYTRANCQPHQVN-VLHQDASQLPAELHGTMDLVISNPPYIPPNAIPRE 202 Query: 184 GLEVRDFDPRISLDG-GIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 EVR+ DP+++L G G DGL R I L G +E Q+ + Sbjct: 203 A-EVREHDPQMALYGLGEDGLQIPRAITAQAMALLRPGGYYVMEHAEVQRESAAAMLREA 261 Query: 243 KLFLVNAFKDYGGNDRV 259 V +D G R Sbjct: 262 GFTHVAGHEDLSGRARA 278 >gi|292490418|ref|YP_003525857.1| modification methylase, HemK family [Nitrosococcus halophilus Nc4] gi|291579013|gb|ADE13470.1| modification methylase, HemK family [Nitrosococcus halophilus Nc4] Length = 312 Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 53/165 (32%), Positives = 83/165 (50%), Gaps = 2/165 (1%) Query: 91 PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150 P + V +LDL TG+G + +A P + DIS +AL +A+ N +G+ ++ Sbjct: 128 PFVSPERVHTLLDLCTGSGCIAIAATYAFPQAQVDATDISQEALAVARLNIERHGLQDQV 187 Query: 151 DTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209 TL S+ F + E +D+IVSNPPY+ + L E +PR +L+ +GLS I Sbjct: 188 HTLPSNLFEGLKERRYDLIVSNPPYVGETELASLPKEYHH-EPRQALEAEDEGLSLVLQI 246 Query: 210 ADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYG 254 HLN+ G+ VE+G ++ R+ E L+L YG Sbjct: 247 LLQAPDHLNEQGILIVEVGNSEAALTRRLPEVPFLWLEFERGGYG 291 >gi|114320027|ref|YP_741710.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Alkalilimnicola ehrlichii MLHE-1] gi|114226421|gb|ABI56220.1| [LSU ribosomal protein L3P]-glutamine N5-methyltransferase [Alkalilimnicola ehrlichii MLHE-1] Length = 309 Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 47/140 (33%), Positives = 76/140 (54%), Gaps = 3/140 (2%) Query: 91 PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150 P + V R+LD+GTG G + +A P + VDIS AL++A+ N + + ER Sbjct: 125 PWLSTDHVHRVLDVGTGGGCIAIACAYAFPQARVDAVDISRDALDVAEINVQRHHLEERV 184 Query: 151 DTLQSDWFSSV--EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208 + SD F + E +++I+SNPPY+++ + L E R +PR+ L+ G DGL R Sbjct: 185 ALIPSDLFDGLPRENRYELIISNPPYVDARDMSDLAPEFR-HEPRLGLEAGDDGLDLVRR 243 Query: 209 IADGVSRHLNKDGLCSVEIG 228 + L ++G+ VE+G Sbjct: 244 LLARAGDFLTEEGILVVEVG 263 >gi|327402057|ref|YP_004342895.1| protein-(glutamine-N5) methyltransferase [Fluviicola taffensis DSM 16823] gi|327317565|gb|AEA42057.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Fluviicola taffensis DSM 16823] Length = 284 Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 68/219 (31%), Positives = 96/219 (43%), Gaps = 17/219 (7%) Query: 49 ESIHRILGWRDFYNVRLTLSSDTFEPRPETELL---VDSALAFSLPRIEKRDVVRILDLG 105 E I+G+ F ++++ ++ PRPETE L + + P IE D Sbjct: 70 EPYQYIVGFTYFDDLKINVAPGVLIPRPETEELTAWIQDTMQLKNPIIE--------DWC 121 Query: 106 TGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS---SVE 162 TG+G + AL P G DIS +ALEIA+ N NG++ + D S S Sbjct: 122 TGSGCIAFALKNRIPNAIVSGFDISEEALEIARKNG--NGLNLNVQFEKRDALSILVSGN 179 Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL-DGGIDGLSHYRTIADGVSRHLNKDG 221 D+IVSNPPYI + + V F+P ++L D L YR +AD S LN DG Sbjct: 180 EKVDLIVSNPPYIPWIEKMEMHQNVTAFEPDLALFVPNEDPLLFYRKLADYASASLNTDG 239 Query: 222 LCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 E+ N + E V +D G R+L Sbjct: 240 YLFFELHENFATQTKEMVEKLGFHPVEIREDLQGKSRML 278 >gi|299770295|ref|YP_003732321.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Acinetobacter sp. DR1] gi|298700383|gb|ADI90948.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Acinetobacter sp. DR1] Length = 334 Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 46/131 (35%), Positives = 73/131 (55%), Gaps = 3/131 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 RILD+ TG+G + +AL P + DIS +ALE+A N + + L+SD F+ Sbjct: 159 RILDMCTGSGCIAVALAYAYPDAEIDATDISKEALEVASINTEHHNKQYQVALLESDLFA 218 Query: 160 SV--EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217 + E +D+IVSNPPY+++ + L E +P ++L G DGL R + + +L Sbjct: 219 KIPAENQYDLIVSNPPYVDAEDMADLPEEFL-HEPELALAAGQDGLDLVRKMLAQAADYL 277 Query: 218 NKDGLCSVEIG 228 +DGL +E+G Sbjct: 278 TEDGLIVIEVG 288 >gi|18203346|sp|Q9PDL1|Y1368_XYLFA RecName: Full=Uncharacterized adenine-specific methylase XF_1368 gi|9106371|gb|AAF84177.1|AE003968_8 adenine-specific methylase [Xylella fastidiosa 9a5c] Length = 312 Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 50/150 (33%), Positives = 81/150 (54%), Gaps = 4/150 (2%) Query: 91 PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150 P + RDV LDL TG+G + +A+ +P + G DIS AL +A N V ++ Sbjct: 127 PWLAGRDVRHALDLCTGSGCIAIAMGHYNPHWSVDGADISEDALSLALENKV-RLLAHNV 185 Query: 151 DTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209 + ++SD F+ + G + +IVSNPPY+ D L E ++P + L G DGL+ I Sbjct: 186 ELIKSDVFAGLVGRRYQLIVSNPPYVTDAETDALPQEY-GYEPELGLRAGPDGLNLVLKI 244 Query: 210 ADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 HL+++GL E+G +++ +VR+ Sbjct: 245 LRDAPAHLDEEGLLICEVGESEQ-QLVRLL 273 >gi|225548516|ref|ZP_03769564.1| putative protoporphyrinogen oxidase [Borrelia burgdorferi 94a] gi|225370779|gb|EEH00214.1| putative protoporphyrinogen oxidase [Borrelia burgdorferi 94a] Length = 286 Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 54/183 (29%), Positives = 94/183 (51%), Gaps = 20/183 (10%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110 IH IL ++F + L+ PR +TE LV+ AL +I++ +ILDL G+G Sbjct: 64 IHYILQKKEFMGIEFNLNRHVLIPRFDTECLVEEALI----QIQQNGFKKILDLCCGSGC 119 Query: 111 VCLALLKESPFF---KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDV 167 + L++ ++ K + DIS KAL+I + N + + + + S+ ++G D+ Sbjct: 120 IGLSI----AYYIRKKVILSDISTKALQIVEKNTKKLKLEKFVEIIHSNLLKCIKGKLDI 175 Query: 168 IVSNPPYIESVIVDCLGLEVRD---FDPRISLDG-GIDGLSHYRTIADGVSRHLNKDGLC 223 I++NPPY+ LE+++ +P +L G G DGL+ R I + L+ +GL Sbjct: 176 IITNPPYLNKE-----ELEIKNKIKKEPTKALLGFGKDGLNISRKILNQAKEKLSPNGLI 230 Query: 224 SVE 226 +E Sbjct: 231 IIE 233 >gi|32130318|sp|Q87DS5|Y606_XYLFT RecName: Full=Uncharacterized adenine-specific methylase PD_0606 gi|28056599|gb|AAO28478.1| adenine-specific methylase [Xylella fastidiosa Temecula1] Length = 312 Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 48/143 (33%), Positives = 78/143 (54%), Gaps = 3/143 (2%) Query: 91 PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150 P + RDV LDL TG+G + +A+ +P ++ G DIS AL +A N V ++ Sbjct: 127 PWLAGRDVRHALDLCTGSGCIAIAMGHYNPHWRVDGSDISEDALSLALENKV-RLLAHNV 185 Query: 151 DTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209 + ++SD F+ + G + +IVSNPPY+ D L E ++P + L G DGL+ I Sbjct: 186 ELIKSDVFAGLVGRRYQLIVSNPPYVTDAETDALPQEY-GYEPELGLRAGPDGLNLVLKI 244 Query: 210 ADGVSRHLNKDGLCSVEIGYNQK 232 HL+++GL E+G +++ Sbjct: 245 LRDAPAHLDEEGLLICEVGESEQ 267 >gi|221217540|ref|ZP_03589010.1| putative protoporphyrinogen oxidase [Borrelia burgdorferi 72a] gi|225549802|ref|ZP_03770766.1| putative protoporphyrinogen oxidase [Borrelia burgdorferi 118a] gi|221192603|gb|EEE18820.1| putative protoporphyrinogen oxidase [Borrelia burgdorferi 72a] gi|225369610|gb|EEG99059.1| putative protoporphyrinogen oxidase [Borrelia burgdorferi 118a] Length = 286 Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 54/183 (29%), Positives = 94/183 (51%), Gaps = 20/183 (10%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110 IH IL ++F + L+ PR +TE LV+ AL +I++ +ILDL G+G Sbjct: 64 IHYILQKKEFMGIEFNLNRHVLIPRFDTECLVEEALI----QIQQNGFKKILDLCCGSGC 119 Query: 111 VCLALLKESPFF---KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDV 167 + L++ ++ K + DIS KAL+I + N + + + + S+ ++G D+ Sbjct: 120 IGLSI----AYYIRKKVILSDISTKALQIVEKNTKKLKLEKFVEIIHSNLLKCIKGKLDI 175 Query: 168 IVSNPPYIESVIVDCLGLEVRD---FDPRISLDG-GIDGLSHYRTIADGVSRHLNKDGLC 223 I++NPPY+ LE+++ +P +L G G DGL+ R I + L+ +GL Sbjct: 176 IITNPPYLNKE-----ELEIKNKIKKEPTKALLGFGKDGLNISRKILNQAKEKLSPNGLI 230 Query: 224 SVE 226 +E Sbjct: 231 IIE 233 >gi|77747651|ref|NP_778829.2| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Xylella fastidiosa Temecula1] gi|182681193|ref|YP_001829353.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Xylella fastidiosa M23] gi|182631303|gb|ACB92079.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Xylella fastidiosa M23] gi|307579639|gb|ADN63608.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Xylella fastidiosa subsp. fastidiosa GB514] Length = 308 Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 48/143 (33%), Positives = 78/143 (54%), Gaps = 3/143 (2%) Query: 91 PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150 P + RDV LDL TG+G + +A+ +P ++ G DIS AL +A N V ++ Sbjct: 123 PWLAGRDVRHALDLCTGSGCIAIAMGHYNPHWRVDGSDISEDALSLALENKV-RLLAHNV 181 Query: 151 DTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209 + ++SD F+ + G + +IVSNPPY+ D L E ++P + L G DGL+ I Sbjct: 182 ELIKSDVFAGLVGRRYQLIVSNPPYVTDAETDALPQEY-GYEPELGLRAGPDGLNLVLKI 240 Query: 210 ADGVSRHLNKDGLCSVEIGYNQK 232 HL+++GL E+G +++ Sbjct: 241 LRDAPAHLDEEGLLICEVGESEQ 263 >gi|301156164|emb|CBW15635.1| N5-glutamine methyltransferase [Haemophilus parainfluenzae T3T1] Length = 314 Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 52/181 (28%), Positives = 90/181 (49%), Gaps = 7/181 (3%) Query: 60 FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119 F + + T PR L+ A L K + RILDL TG+G + +A + Sbjct: 108 FCGLEFYVDERTIIPRSPISALIQDKFAPLL----KSEPKRILDLCTGSGCIAIATAEAF 163 Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESV 178 P + VD+S AL +A+ N + + R +QSD F ++ G +D+IV+NPPY++ Sbjct: 164 PEAEVDAVDLSVDALNVAEINIARHQLEHRVFPIQSDLFQNLFGQQYDLIVTNPPYVDEE 223 Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238 + + E ++P ++L G+DGL + I +L ++G+ E+G N V ++ Sbjct: 224 DLADMPEEFH-YEPELALGSGVDGLEITKQILKQAPDYLTQNGMLVCEVG-NSMVSLIEQ 281 Query: 239 F 239 + Sbjct: 282 Y 282 >gi|71274842|ref|ZP_00651130.1| Modification methylase HemK [Xylella fastidiosa Dixon] gi|71901443|ref|ZP_00683532.1| Modification methylase HemK [Xylella fastidiosa Ann-1] gi|170729912|ref|YP_001775345.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Xylella fastidiosa M12] gi|71164574|gb|EAO14288.1| Modification methylase HemK [Xylella fastidiosa Dixon] gi|71728782|gb|EAO30924.1| Modification methylase HemK [Xylella fastidiosa Ann-1] gi|167964705|gb|ACA11715.1| Site-specific DNA-methyltransferase (adenine-specific) [Xylella fastidiosa M12] Length = 308 Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 48/143 (33%), Positives = 77/143 (53%), Gaps = 3/143 (2%) Query: 91 PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150 P + RDV LDL TG+G + +A+ +P + G DIS AL +A N V ++ Sbjct: 123 PWLAGRDVRHALDLCTGSGCIAIAMGHYNPHWSVDGADISEDALSLALENKV-RLLAHNV 181 Query: 151 DTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209 + ++SD F+ + G + +IVSNPPY+ D L E ++P + L G DGL+ I Sbjct: 182 ELIKSDVFAGLVGRRYQLIVSNPPYVTDAETDALPQEY-GYEPELGLRAGPDGLNLVLKI 240 Query: 210 ADGVSRHLNKDGLCSVEIGYNQK 232 HL+++GL E+G +++ Sbjct: 241 LRDAPAHLDEEGLLICEVGESEQ 263 >gi|167846309|ref|ZP_02471817.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Burkholderia pseudomallei B7210] Length = 307 Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 55/165 (33%), Positives = 84/165 (50%), Gaps = 15/165 (9%) Query: 91 PRIEKRDVV-RILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVS 147 P +E ++V +L+L TG+G CLA+L F VD+S AL +AK N G+ Sbjct: 122 PYVEDPELVGSVLELCTGSG--CLAILAALAFPNASVDAVDLSADALAVAKINRDNYGLD 179 Query: 148 ERFDTLQSDWFSSVEGL--------FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199 ER D ++ + +DVI++NPPY+ + + L E R +P ++L GG Sbjct: 180 ERIALYHGDLYAPLPQFKWIDPAQRYDVIIANPPYVNAGSMAELPAEYR-HEPEMALAGG 238 Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 +DG+ R I R L DG+ VEIG N++ +V F +L Sbjct: 239 VDGMDIVRRIIGEARRWLQDDGVLVVEIG-NERANVEAAFGGLEL 282 >gi|325961839|ref|YP_004239745.1| methylase of HemK family [Arthrobacter phenanthrenivorans Sphe3] gi|323467926|gb|ADX71611.1| putative methylase of HemK family [Arthrobacter phenanthrenivorans Sphe3] Length = 271 Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 57/199 (28%), Positives = 87/199 (43%), Gaps = 9/199 (4%) Query: 38 LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97 L + R + + ILGW F R+++ + F PR TELLV A+ L Sbjct: 45 LAGWVDRRVNGVPLEHILGWAGFDGGRISVDAGVFVPRRRTELLVHEAVRL-LHHASSAS 103 Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 ++DL G+GAV A+ + P + DI A+E A+ N G Q D Sbjct: 104 RGVVVDLCCGSGAVGAAIARRRPDIELHAADIDPAAVECARRNVNAFGA----HVHQGDL 159 Query: 158 FSSV----EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213 F ++ V+ N PY+ + + + E R F+P +LDGG DGL +R I+ G Sbjct: 160 FEALPLRLRDRVQVLAVNAPYVPTGAIAAMPPEARVFEPHTALDGGADGLDFHRRISAGA 219 Query: 214 SRHLNKDGLCSVEIGYNQK 232 + G +E +Q Sbjct: 220 LEWIAPVGHLLIETSRHQS 238 >gi|229024782|ref|ZP_04181218.1| Modification methylase, HemK [Bacillus cereus AH1272] gi|228736493|gb|EEL87052.1| Modification methylase, HemK [Bacillus cereus AH1272] Length = 232 Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 61/195 (31%), Positives = 92/195 (47%), Gaps = 8/195 (4%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110 + ++G+ +F +R+ + F PR TE LV A S R I+DL G+GA Sbjct: 23 LEYVVGYTEFCGLRIEVDRGVFVPRKRTEFLVHQTEALS------RSSDIIVDLCCGSGA 76 Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFSSVEGLFDVIV 169 V AL + VDI A++ A N VTN F+ L S++G +++V Sbjct: 77 VGAALASALGRVELYSVDIDPIAVQCASRN-VTNFGGHAFEGDLYKALPDSLKGHVNILV 135 Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY 229 +N PY+ + I+ L E R +P ++LDGG DGL+ R +A+ L DG +E Sbjct: 136 ANVPYVPTEIIKFLPREARLHEPNVTLDGGEDGLNILRRVAEEALLWLALDGHLLIEASE 195 Query: 230 NQKVDVVRIFESRKL 244 Q IF + L Sbjct: 196 VQAPQACEIFAAAGL 210 >gi|209521621|ref|ZP_03270317.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Burkholderia sp. H160] gi|209497948|gb|EDZ98107.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Burkholderia sp. H160] Length = 294 Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 55/176 (31%), Positives = 89/176 (50%), Gaps = 11/176 (6%) Query: 91 PRIE-KRDVVRILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVS 147 P +E V +L+L TG+G CLA+L F VD+S ALE+A N + + Sbjct: 119 PYVEDPEQVSAVLELCTGSG--CLAILAAHAFQNADVDAVDLSAPALEVATRNVMDYHLD 176 Query: 148 ERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206 +R + D ++ + E +DV++SNPPY+ + + L E + +P ++L GG+DG+ Sbjct: 177 DRIALFEGDLYAPLAERRYDVVISNPPYVNAASMQELPAEYK-HEPEMALAGGMDGMDIV 235 Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262 R I L +DG+ +EIG N++ V F L ++ G+D V L Sbjct: 236 RRIIADARNWLTEDGVLVIEIG-NEREHVEAAFGGLDLVWLST---SAGDDNVFLI 287 >gi|229018524|ref|ZP_04175384.1| Modification methylase, HemK [Bacillus cereus AH1273] gi|228742765|gb|EEL92905.1| Modification methylase, HemK [Bacillus cereus AH1273] Length = 258 Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 61/195 (31%), Positives = 92/195 (47%), Gaps = 8/195 (4%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110 + ++G+ +F +R+ + F PR TE LV A S R I+DL G+GA Sbjct: 49 LEYVVGYTEFCGLRIEVDRGVFVPRKRTEFLVHQTEALS------RSSDIIVDLCCGSGA 102 Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFSSVEGLFDVIV 169 V AL + VDI A++ A N VTN F+ L S++G +++V Sbjct: 103 VGAALASALGRVELYSVDIDPIAVQCASRN-VTNFGGHAFEGDLYKALPDSLKGHVNILV 161 Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY 229 +N PY+ + I+ L E R +P ++LDGG DGL+ R +A+ L DG +E Sbjct: 162 ANVPYVPTEIIKFLPREARLHEPNVTLDGGEDGLNILRRVAEEALLWLALDGHLLIEASE 221 Query: 230 NQKVDVVRIFESRKL 244 Q IF + L Sbjct: 222 VQAPQACEIFAAAGL 236 >gi|77166384|ref|YP_344909.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Nitrosococcus oceani ATCC 19707] gi|76884698|gb|ABA59379.1| [LSU ribosomal protein L3P]-glutamine N5-methyltransferase [Nitrosococcus oceani ATCC 19707] Length = 299 Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 51/162 (31%), Positives = 78/162 (48%), Gaps = 7/162 (4%) Query: 74 PR-PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCK 132 PR P EL+ F+ P + +LDL TG+G + +A P + DIS + Sbjct: 110 PRSPLAELIAQRFAPFAFPE----SIHSLLDLCTGSGCIAIAAAHAFPEAQVDATDISEE 165 Query: 133 ALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFD 191 AL +A+ N +G+ + S F + G +D+IVSNPPY+ + L E + Sbjct: 166 ALAVARMNIERHGLEAQVHAFSSSLFQKLGGRRYDLIVSNPPYVGQTELAALAREYHH-E 224 Query: 192 PRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233 PR +L+ DGLS I HLN+ G+ VE+G ++ Sbjct: 225 PRQALEAEEDGLSIVLQILRQAPEHLNEKGILIVEVGNSEAA 266 >gi|171319301|ref|ZP_02908414.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Burkholderia ambifaria MEX-5] gi|171095483|gb|EDT40450.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Burkholderia ambifaria MEX-5] Length = 302 Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 57/178 (32%), Positives = 87/178 (48%), Gaps = 16/178 (8%) Query: 94 EKRDVVRILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVSERFD 151 + V +L+L TG+G CLA+L S F VD+S ALE+A+ N G+ ER Sbjct: 123 DPEQVGAVLELCTGSG--CLAILAASAFPNAEIDAVDLSDNALEVARINVRDYGLDERIT 180 Query: 152 TLQSDWFSSVEGL-------FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204 + D ++ + +DVI++NPPY+ + + L E R +P ++L GG DG+ Sbjct: 181 LHRGDLYAPLPAFRAEPDARYDVILTNPPYVNATSMAALPPEYR-HEPEMALAGGEDGMD 239 Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262 R I + L+ DG+ VEIG N++ V F +L G+D V L Sbjct: 240 IVRRIISEAHKWLHDDGVLVVEIG-NEREHVEAAFGGLEL---TWLPTSAGDDTVFLI 293 >gi|258626193|ref|ZP_05721041.1| conserved hypothetical protein [Vibrio mimicus VM603] gi|262166219|ref|ZP_06033956.1| hypothetical adenine-specific methylase yfcB [Vibrio mimicus VM223] gi|262170895|ref|ZP_06038573.1| hypothetical adenine-specific methylase yfcB [Vibrio mimicus MB-451] gi|258581548|gb|EEW06449.1| conserved hypothetical protein [Vibrio mimicus VM603] gi|261891971|gb|EEY37957.1| hypothetical adenine-specific methylase yfcB [Vibrio mimicus MB-451] gi|262025935|gb|EEY44603.1| hypothetical adenine-specific methylase yfcB [Vibrio mimicus VM223] Length = 310 Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 43/134 (32%), Positives = 74/134 (55%), Gaps = 2/134 (1%) Query: 96 RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155 + RI+DL TG+G + +A P + +DIS AL++A+ N +G+ ++ ++S Sbjct: 131 EEPTRIMDLCTGSGCIAIACANAFPEAEVDAIDISVDALQVAEQNIQDHGLEQQVFPIRS 190 Query: 156 DWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214 D F + + +D+IV+NPPY++ +D L E R +P + L G DGL R I Sbjct: 191 DLFRDLPQEQYDLIVTNPPYVDQEDMDSLPSEFR-HEPELGLAAGSDGLKLARRILANAP 249 Query: 215 RHLNKDGLCSVEIG 228 +L ++G+ E+G Sbjct: 250 LYLKENGVLVCEVG 263 >gi|224438090|ref|ZP_03659029.1| DNA methylase HemK [Helicobacter cinaedi CCUG 18818] Length = 278 Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 65/238 (27%), Positives = 103/238 (43%), Gaps = 12/238 (5%) Query: 27 DSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL 86 SV + + FL+ R+ K + I I FY ++ PRPE+E+L+ A Sbjct: 52 QSVNPTQAKHFLSLVEERA-KGKPIEYITQSASFYEHTFYVNDSVLIPRPESEILIQKAS 110 Query: 87 AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146 I + ++ I ++G G+G + + L P + DIS KALE+ + N + Sbjct: 111 EI----ITRHNIESIAEVGIGSGILSITLSLLHPQCRFFATDISQKALEVTQKNIHSLAP 166 Query: 147 SERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206 S ++I+SNPPYI L L ++P I+L GG DGL Sbjct: 167 DSNITLKHCSLLPSSWQDIELIISNPPYICDDYPISLPL---TYEPSIALFGGKDGLDIL 223 Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 + + + N+ EIGY+QK + +I + +KD G DR +CR Sbjct: 224 KAL---IVEAKNRKAFLLCEIGYDQKNALEQILTQHNAKDIEFYKDLSGLDRG-FWCR 277 >gi|262372606|ref|ZP_06065885.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Acinetobacter junii SH205] gi|262312631|gb|EEY93716.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Acinetobacter junii SH205] Length = 336 Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 46/131 (35%), Positives = 73/131 (55%), Gaps = 3/131 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 RILD+ TG+G + +AL P + DIS +ALE+A N + + L+SD F+ Sbjct: 159 RILDMCTGSGCIAVALAYAFPDSEVDATDISKEALEVASINTEHHNKQYQVALLESDLFA 218 Query: 160 SV--EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217 + E +D+IVSNPPY+++ + L E +P ++L G DGL R + + +L Sbjct: 219 KIPAENQYDLIVSNPPYVDAEDMADLPEEFL-HEPELALAAGQDGLDLVRKMLAQAADYL 277 Query: 218 NKDGLCSVEIG 228 +DGL +E+G Sbjct: 278 TEDGLIVIEVG 288 >gi|193077327|gb|ABO12120.2| putative adenine-specific methylase [Acinetobacter baumannii ATCC 17978] Length = 334 Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 46/131 (35%), Positives = 72/131 (54%), Gaps = 3/131 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 RILD+ TG+G + +AL P + DIS +ALE+A N + + L+SD F Sbjct: 159 RILDMCTGSGCIAVALAYAYPDAEVDATDISKEALEVASINVEHHNKQYQVALLESDLFE 218 Query: 160 SV--EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217 + E +D+IVSNPPY+++ + L E +P ++L G DGL R + + +L Sbjct: 219 KIPAENQYDLIVSNPPYVDAEDMADLPEEFL-HEPELALAAGQDGLDLVRKMLAQAADYL 277 Query: 218 NKDGLCSVEIG 228 +DGL +E+G Sbjct: 278 TEDGLIVIEVG 288 >gi|254435800|ref|ZP_05049307.1| methyltransferase, HemK family [Nitrosococcus oceani AFC27] gi|207088911|gb|EDZ66183.1| methyltransferase, HemK family [Nitrosococcus oceani AFC27] Length = 303 Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 53/175 (30%), Positives = 84/175 (48%), Gaps = 7/175 (4%) Query: 74 PR-PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCK 132 PR P EL+ F+ P + +LDL TG+G + +A P + DIS + Sbjct: 114 PRSPLAELIAQRFAPFAFPE----SIHSLLDLCTGSGCIAIAAAHAFPEAQVDATDISEE 169 Query: 133 ALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFD 191 AL +A+ N +G+ + S F + G +D+IVSNPPY+ + L E + Sbjct: 170 ALAVARMNIERHGLEAQVHAFSSSLFQKLGGRRYDLIVSNPPYVGQTELAALAREYHH-E 228 Query: 192 PRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246 PR +L+ DGLS I HLN+ G+ VE+G ++ + + + L+L Sbjct: 229 PRQALEAEEDGLSIVLQILRQAPEHLNEKGILIVEVGNSEAALIEHLPQVPFLWL 283 >gi|169633548|ref|YP_001707284.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Acinetobacter baumannii SDF] gi|169152340|emb|CAP01264.1| putative adenine-specific methylase [Acinetobacter baumannii] Length = 334 Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 46/131 (35%), Positives = 72/131 (54%), Gaps = 3/131 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 RILD+ TG+G + +AL P + DIS +ALE+A N + + L+SD F Sbjct: 159 RILDMCTGSGCIAVALAYAYPDAEVDATDISKEALEVASINVEHHNKQYQVALLESDLFE 218 Query: 160 SV--EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217 + E +D+IVSNPPY+++ + L E +P ++L G DGL R + + +L Sbjct: 219 KIPAENQYDLIVSNPPYVDAEDMADLPEEFL-HEPELALAAGQDGLDLVRKMLAQAADYL 277 Query: 218 NKDGLCSVEIG 228 +DGL +E+G Sbjct: 278 TEDGLIVIEVG 288 >gi|313144534|ref|ZP_07806727.1| protoporphyrinogen oxidase [Helicobacter cinaedi CCUG 18818] gi|313129565|gb|EFR47182.1| protoporphyrinogen oxidase [Helicobacter cinaedi CCUG 18818] Length = 280 Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 65/238 (27%), Positives = 103/238 (43%), Gaps = 12/238 (5%) Query: 27 DSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL 86 SV + + FL+ R+ K + I I FY ++ PRPE+E+L+ A Sbjct: 54 QSVNPTQAKHFLSLVEERA-KGKPIEYITQSASFYEHTFYVNDSVLIPRPESEILIQKAS 112 Query: 87 AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146 I + ++ I ++G G+G + + L P + DIS KALE+ + N + Sbjct: 113 EI----ITRHNIESIAEVGIGSGILSITLSLLHPQCRFFATDISQKALEVTQKNIHSLAP 168 Query: 147 SERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206 S ++I+SNPPYI L L ++P I+L GG DGL Sbjct: 169 DSNITLKHCSLLPSSWQDIELIISNPPYICDDYPISLPL---TYEPSIALFGGKDGLDIL 225 Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 + + + N+ EIGY+QK + +I + +KD G DR +CR Sbjct: 226 KAL---IVEAKNRKAFLLCEIGYDQKNALEQILTQHNAKDIEFYKDLSGLDRG-FWCR 279 >gi|169796031|ref|YP_001713824.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Acinetobacter baumannii AYE] gi|184158049|ref|YP_001846388.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Acinetobacter baumannii ACICU] gi|213157235|ref|YP_002319280.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Acinetobacter baumannii AB0057] gi|215483488|ref|YP_002325705.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Acinetobacter baumannii AB307-0294] gi|239501832|ref|ZP_04661142.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Acinetobacter baumannii AB900] gi|260555080|ref|ZP_05827301.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Acinetobacter baumannii ATCC 19606] gi|301346168|ref|ZP_07226909.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Acinetobacter baumannii AB056] gi|301513156|ref|ZP_07238393.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Acinetobacter baumannii AB058] gi|301596746|ref|ZP_07241754.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Acinetobacter baumannii AB059] gi|332851680|ref|ZP_08433605.1| (glutamine-N5) methyltransferase, ribosomal protein L3-specific [Acinetobacter baumannii 6013150] gi|332865945|ref|ZP_08436725.1| (glutamine-N5) methyltransferase, ribosomal protein L3-specific [Acinetobacter baumannii 6013113] gi|332874509|ref|ZP_08442412.1| (glutamine-N5) methyltransferase, ribosomal protein L3-specific [Acinetobacter baumannii 6014059] gi|169148958|emb|CAM86833.1| putative adenine-specific methylase [Acinetobacter baumannii AYE] gi|183209643|gb|ACC57041.1| Methylase of polypeptide chain release factors [Acinetobacter baumannii ACICU] gi|213056395|gb|ACJ41297.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Acinetobacter baumannii AB0057] gi|213987164|gb|ACJ57463.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Acinetobacter baumannii AB307-0294] gi|260411622|gb|EEX04919.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Acinetobacter baumannii ATCC 19606] gi|322508368|gb|ADX03822.1| Putative adenine-specific methylase [Acinetobacter baumannii 1656-2] gi|323517990|gb|ADX92371.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Acinetobacter baumannii TCDC-AB0715] gi|332729687|gb|EGJ61022.1| (glutamine-N5) methyltransferase, ribosomal protein L3-specific [Acinetobacter baumannii 6013150] gi|332734995|gb|EGJ66081.1| (glutamine-N5) methyltransferase, ribosomal protein L3-specific [Acinetobacter baumannii 6013113] gi|332737353|gb|EGJ68277.1| (glutamine-N5) methyltransferase, ribosomal protein L3-specific [Acinetobacter baumannii 6014059] Length = 334 Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 46/131 (35%), Positives = 72/131 (54%), Gaps = 3/131 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 RILD+ TG+G + +AL P + DIS +ALE+A N + + L+SD F Sbjct: 159 RILDMCTGSGCIAVALAYAYPDAEVDATDISKEALEVASINVEHHNKQYQVALLESDLFE 218 Query: 160 SV--EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217 + E +D+IVSNPPY+++ + L E +P ++L G DGL R + + +L Sbjct: 219 KIPAENQYDLIVSNPPYVDAEDMADLPEEFL-HEPELALAAGQDGLDLVRKMLAQAADYL 277 Query: 218 NKDGLCSVEIG 228 +DGL +E+G Sbjct: 278 TEDGLIVIEVG 288 >gi|258621119|ref|ZP_05716153.1| conserved hypothetical protein [Vibrio mimicus VM573] gi|258586507|gb|EEW11222.1| conserved hypothetical protein [Vibrio mimicus VM573] Length = 314 Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 43/134 (32%), Positives = 74/134 (55%), Gaps = 2/134 (1%) Query: 96 RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155 + RI+DL TG+G + +A P + +DIS AL++A+ N +G+ ++ ++S Sbjct: 135 EEPTRIMDLCTGSGCIAIACANAFPEAEVDAIDISVDALQVAEQNIQDHGLEQQVFPIRS 194 Query: 156 DWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214 D F + + +D+IV+NPPY++ +D L E R +P + L G DGL R I Sbjct: 195 DLFRDLPQEQYDLIVTNPPYVDQEDMDSLPSEFR-HEPELGLAAGSDGLKLARRILANAP 253 Query: 215 RHLNKDGLCSVEIG 228 +L ++G+ E+G Sbjct: 254 LYLKENGVLVCEVG 267 >gi|116330130|ref|YP_799848.1| methylase of polypeptide chain release factors [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|116123819|gb|ABJ75090.1| Methylase of polypeptide chain release factors [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 286 Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 61/195 (31%), Positives = 96/195 (49%), Gaps = 8/195 (4%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L + L ++ V+ + +L + ++ IV K++ I G + FYN Sbjct: 29 DAEILLADLLNLQRVKLYVNFERLLTETEKNAYRERIVDRSKNKPTAYITGQKAFYNSVF 88 Query: 66 TLSSDTFEPRPETELLVDSALA-FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 ++ PRPETE LV+ L F E+ +LDL TG+G + ++L + Sbjct: 89 FVNEKVLIPRPETEELVEKILLDFKGNNSEQ----NVLDLCTGSGCIGISLKSARKDWNI 144 Query: 125 VGVDISCKALEIAKSNAVT-NGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVD 181 DIS ALEIAK NA+ G L+S+ F S+ E FD+IV+NPPYI Sbjct: 145 TLSDISKDALEIAKKNAIQIIGEGNNIQFLESNLFLSIPKESEFDLIVTNPPYIPISDKT 204 Query: 182 CLGLEVRDFDPRISL 196 + +V D++P ++L Sbjct: 205 AMMKDVVDYEPHLAL 219 >gi|227327270|ref|ZP_03831294.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 310 Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 50/156 (32%), Positives = 80/156 (51%), Gaps = 6/156 (3%) Query: 74 PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133 PR L+++ LP+ ILDL TG+G + +A + P + VDIS +A Sbjct: 113 PRSPIGELINNYFDEQLPKTPSH----ILDLCTGSGCIAIACAQAFPEAEVDAVDISSEA 168 Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDP 192 L + + N +G+ R ++SD F + + +D+IV+NPPY++ + L E R F+P Sbjct: 169 LAVTEQNIQQHGLEYRVTPIRSDLFRDLPAIRYDLIVTNPPYVDEEDMFDLPQEFR-FEP 227 Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228 + L G DGL R I +L+ DG+ E+G Sbjct: 228 ELGLAAGNDGLDLVRRILACAPDYLSDDGVLICEVG 263 >gi|254297194|ref|ZP_04964647.1| methyltransferase, HemK family [Burkholderia pseudomallei 406e] gi|157807674|gb|EDO84844.1| methyltransferase, HemK family [Burkholderia pseudomallei 406e] Length = 307 Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 55/165 (33%), Positives = 84/165 (50%), Gaps = 15/165 (9%) Query: 91 PRIEKRDVV-RILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVS 147 P +E ++V +L+L TG+G CLA+L F VD+S AL +AK N +G+ Sbjct: 122 PYVEDPELVGSVLELCTGSG--CLAILAALAFPNASVDAVDLSADALAVAKINRDNDGLD 179 Query: 148 ERFDTLQSDWFSSVEGL--------FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199 ER D ++ + +DVI++NPPY+ + + L E R +P ++L GG Sbjct: 180 ERIALYHGDLYAPLPQFKWIDPAQRYDVIIANPPYVNAGSMAELPAEYR-HEPEMALAGG 238 Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 DG+ R I R L DG+ VEIG N++ +V F +L Sbjct: 239 ADGMDIVRRIIGEARRWLQDDGVLVVEIG-NERANVEAAFGGLEL 282 >gi|126641738|ref|YP_001084722.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Acinetobacter baumannii ATCC 17978] Length = 251 Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 46/131 (35%), Positives = 72/131 (54%), Gaps = 3/131 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 RILD+ TG+G + +AL P + DIS +ALE+A N + + L+SD F Sbjct: 76 RILDMCTGSGCIAVALAYAYPDAEVDATDISKEALEVASINVEHHNKQYQVALLESDLFE 135 Query: 160 SV--EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217 + E +D+IVSNPPY+++ + L E +P ++L G DGL R + + +L Sbjct: 136 KIPAENQYDLIVSNPPYVDAEDMADLPEEFL-HEPELALAAGQDGLDLVRKMLAQAADYL 194 Query: 218 NKDGLCSVEIG 228 +DGL +E+G Sbjct: 195 TEDGLIVIEVG 205 >gi|53805109|ref|YP_113211.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Methylococcus capsulatus str. Bath] gi|53758870|gb|AAU93161.1| modification methylase, HemK family [Methylococcus capsulatus str. Bath] Length = 321 Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 50/147 (34%), Positives = 75/147 (51%), Gaps = 2/147 (1%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LDL TG+G + +A + P + VDIS ALE+A N +G+ E + SD + Sbjct: 136 VLDLCTGSGCIAIACAEAFPQARVDAVDISGGALEVAGMNVRAHGLEETVRLVHSDLYQQ 195 Query: 161 VEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 ++G +D+IVSNPPY+ L E +PR+ L+ G DGL R I G + L Sbjct: 196 LDGSRYDLIVSNPPYVNLQEWRALPPEYHA-EPRLGLESGEDGLDCIRRILAGAADRLKP 254 Query: 220 DGLCSVEIGYNQKVDVVRIFESRKLFL 246 G+ VE+G + + E L+L Sbjct: 255 GGVLVVEVGSSAEALAAAFPEVEFLWL 281 >gi|126453622|ref|YP_001066767.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Burkholderia pseudomallei 1106a] gi|242317080|ref|ZP_04816096.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Burkholderia pseudomallei 1106b] gi|126227264|gb|ABN90804.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Burkholderia pseudomallei 1106a] gi|242140319|gb|EES26721.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Burkholderia pseudomallei 1106b] Length = 307 Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 55/165 (33%), Positives = 84/165 (50%), Gaps = 15/165 (9%) Query: 91 PRIEKRDVV-RILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVS 147 P +E ++V +L+L TG+G CLA+L F VD+S AL +AK N +G+ Sbjct: 122 PYVEDPELVGSVLELCTGSG--CLAILAALAFPNASVDAVDLSADALAVAKINRDNDGLD 179 Query: 148 ERFDTLQSDWFSSVEGL--------FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199 ER D ++ + +DVI++NPPY+ + + L E R +P ++L GG Sbjct: 180 ERIALYHGDLYAPLPQFKWIDPAQRYDVIIANPPYVNAGSMAELPAEYR-HEPEMALAGG 238 Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 DG+ R I R L DG+ VEIG N++ +V F +L Sbjct: 239 ADGMDIVRRIIGEARRWLQDDGVLVVEIG-NERANVEAAFGGLEL 282 >gi|258544124|ref|ZP_05704358.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Cardiobacterium hominis ATCC 15826] gi|258520632|gb|EEV89491.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Cardiobacterium hominis ATCC 15826] Length = 299 Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 53/157 (33%), Positives = 81/157 (51%), Gaps = 7/157 (4%) Query: 74 PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE--SPFFKGVGVDISC 131 PR L+ LA P+ E + RILDL G+G CL +L + P + V D+ Sbjct: 104 PRSPIAELIARDLAPWWPQGEAPE--RILDLCCGSG--CLGILAQLQQPQAEVVLADLDT 159 Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFD 191 AL++A+ N +S+ + Q D ++V G FD I+ NPPY+E+ +D + E R + Sbjct: 160 DALDVARLNLARYNMSDVVEICQGDGLAAVRGQFDWIICNPPYVEAAEMDDIATEYR-HE 218 Query: 192 PRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228 PR +L G DGL R + +L + GL +E+G Sbjct: 219 PRQALVSGEDGLDFTRRLLHEAPDYLTERGLLVLEVG 255 >gi|152965227|ref|YP_001361011.1| modification methylase, HemK family [Kineococcus radiotolerans SRS30216] gi|151359744|gb|ABS02747.1| modification methylase, HemK family [Kineococcus radiotolerans SRS30216] Length = 285 Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 62/213 (29%), Positives = 95/213 (44%), Gaps = 7/213 (3%) Query: 50 SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109 + + G F + L + F PRPETE + A+ + + ++DL TG+G Sbjct: 69 PLQHLTGRAGFRALELHVGPGVFVPRPETETVAQLAVDEAQRLVAAGRFPTVVDLCTGSG 128 Query: 110 AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW---FSSVEGLFD 166 A+ LA+ E P V++ A A+ N + ++ R D + D F+ ++G D Sbjct: 129 AIALAVATEVPRAAVHAVELDPMAHAWARRN--VDAIAPRVDLREGDAGTAFADLDGRVD 186 Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISLDG-GIDGLSHYRTIADGVSRHLNKDGLCSV 225 V+VSNPPY+ V L EV DP ++L G G DGL R + +R L G V Sbjct: 187 VVVSNPPYVPPGAVP-LDPEVALHDPEVALYGLGDDGLLVPRRVVAAAARLLVPGGYVVV 245 Query: 226 EIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258 E Q+ +F V + +D G R Sbjct: 246 EHAEVQERSARALFAGPAWTGVESHRDLTGRPR 278 >gi|328675473|gb|AEB28148.1| Adenine-specific methylase [Francisella cf. novicida 3523] Length = 314 Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 47/139 (33%), Positives = 81/139 (58%), Gaps = 8/139 (5%) Query: 97 DVVRILDLGTGTGAVCLALLKESPFFKGVG---VDISCKALEIAKSNAVTNGVSERFDTL 153 DV +LDL TG+G + +A S F+ VDIS AL +A N + +S+R + Sbjct: 135 DVTSVLDLCTGSGCIGIAC---SNVFEEANITLVDISDDALAVANHNIKKHQLSDRVRAI 191 Query: 154 QSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212 +SD F ++ G FD+IVSNPPY++ ++ + E ++P+++L+ G DGL + I Sbjct: 192 KSDLFDNLHGQKFDLIVSNPPYVDKEDLNSMPQEYH-YEPKLALEAGDDGLELAKKIILE 250 Query: 213 VSRHLNKDGLCSVEIGYNQ 231 +++ ++G+ VE+G +Q Sbjct: 251 ADQYMTENGVLIVEVGNSQ 269 >gi|308050332|ref|YP_003913898.1| (50S ribosomal protein L3P)-glutamine N5-methyltransferase [Ferrimonas balearica DSM 9799] gi|307632522|gb|ADN76824.1| (LSU ribosomal protein L3P)-glutamine N5-methyltransferase [Ferrimonas balearica DSM 9799] Length = 311 Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 52/139 (37%), Positives = 78/139 (56%), Gaps = 2/139 (1%) Query: 91 PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150 P + + V RILDL TG+ + +A + VDIS ALE+A+ N +G+ ER Sbjct: 127 PWLYNKPVNRILDLCTGSACIAIACAYAFENAEVDAVDISDDALEVAQINIEQHGMLERV 186 Query: 151 DTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209 +QSD F+++EG +D+IVSNPPY+++ + L E +P + L G DGL + I Sbjct: 187 FPIQSDGFTALEGQKYDLIVSNPPYVDAEDMGDLPEEFH-HEPELGLASGRDGLDLTKRI 245 Query: 210 ADGVSRHLNKDGLCSVEIG 228 + HL DG+ VE+G Sbjct: 246 LARAADHLTDDGILIVEVG 264 >gi|167837055|ref|ZP_02463938.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Burkholderia thailandensis MSMB43] Length = 307 Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 60/183 (32%), Positives = 89/183 (48%), Gaps = 18/183 (9%) Query: 91 PRIEKRDVV-RILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVS 147 P +E ++V +L+L TG+G CLA+L F VD+S ALE+AK N G+ Sbjct: 122 PYVEDPELVGSVLELCTGSG--CLAILAALAFPNASVDAVDLSADALEVAKINRDDYGLD 179 Query: 148 ERFDTLQSDWFSSVEGL--------FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199 ER + D ++ + +D I++NPPY+ S + L E R +P ++L GG Sbjct: 180 ERIALYRGDLYAPLPQFKWIDPAQRYDAIITNPPYVNSDSMAELPAEYR-HEPEMALAGG 238 Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRV 259 DG+ R I R L DG+ VEIG N++ +V F L + G+D V Sbjct: 239 ADGMDIVRRIIGEARRWLKDDGVLVVEIG-NERANVEAAFGGLDLVWL---PTSAGDDSV 294 Query: 260 LLF 262 L Sbjct: 295 FLI 297 >gi|262376567|ref|ZP_06069796.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Acinetobacter lwoffii SH145] gi|262308706|gb|EEY89840.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Acinetobacter lwoffii SH145] Length = 336 Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 45/131 (34%), Positives = 73/131 (55%), Gaps = 3/131 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 RILD+ TG+G + +AL P + DIS +ALE+A+ N + + L+SD F Sbjct: 159 RILDMCTGSGCIAIALAYAFPEAEVDATDISKEALEVAQINTEHHDKQYQIALLESDLFE 218 Query: 160 SV--EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217 + E +D+IVSNPPY+++ + L E +P ++L G DGL R + + +L Sbjct: 219 KIPAENQYDLIVSNPPYVDAEDMADLPEEFH-HEPELALAAGQDGLDLVRKMLAQAADYL 277 Query: 218 NKDGLCSVEIG 228 ++GL +E+G Sbjct: 278 TENGLIVIEVG 288 >gi|289209006|ref|YP_003461072.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Thioalkalivibrio sp. K90mix] gi|288944637|gb|ADC72336.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Thioalkalivibrio sp. K90mix] Length = 306 Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 66/194 (34%), Positives = 93/194 (47%), Gaps = 11/194 (5%) Query: 74 PR-PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCK 132 PR P EL+ A+ F P IE V R+LDL TG G + +A P + D+S Sbjct: 118 PRSPLAELI---AVGFE-PWIEAASVERVLDLCTGGGCIGIATALALPQAQVDLSDVSEP 173 Query: 133 ALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVDCLGLEVRDF 190 AL +A N + V +R SD ++ E +D+IVSNPPY+++ + L E R Sbjct: 174 ALAVAARNIERHDVGDRVQVRHSDVLDALGPEDRYDLIVSNPPYVDARDMAELPQEYR-H 232 Query: 191 DPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAF 250 +P + L G DGL R I RHL +DG VE+G +Q V F L + Sbjct: 233 EPELGLAAGEDGLDIVRRILADARRHLTEDGALIVEVGNSQPA-VEEAFPDLPLIWLE-- 289 Query: 251 KDYGGNDRVLLFCR 264 + GG+ L + R Sbjct: 290 FESGGHGVFLAYAR 303 >gi|332529216|ref|ZP_08405180.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Hylemonella gracilis ATCC 19624] gi|332041439|gb|EGI77801.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Hylemonella gracilis ATCC 19624] Length = 307 Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 56/190 (29%), Positives = 92/190 (48%), Gaps = 9/190 (4%) Query: 78 TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137 EL+ D+ +L D +LDL TG G++ + P + G DIS +AL +A Sbjct: 110 AELIADADGQGTLDAWLGEDTSAVLDLCTGNGSLAVLAALAWPEVRVDGADISDEALAVA 169 Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197 + N +G+ ER L+SD + V +D+I+ NPPY+ + L E R +P ++L Sbjct: 170 RINIDKHGLQERVQLLKSDGLAQVARSYDLILCNPPYVNQQSMTALPAEYR-AEPELALA 228 Query: 198 GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF---ESRKLFLVNAFKDYG 254 GG DG+ R + ++ + +EIG N++ F +R ++L + Sbjct: 229 GGADGMDFIRRLLRDAPARMSAHAVLVLEIG-NEREHYEAAFPALAARTVWLDTS----A 283 Query: 255 GNDRVLLFCR 264 G D+VLL R Sbjct: 284 GADQVLLLTR 293 >gi|145298911|ref|YP_001141752.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Aeromonas salmonicida subsp. salmonicida A449] gi|142851683|gb|ABO90004.1| adenine-specific methylase [Aeromonas salmonicida subsp. salmonicida A449] Length = 313 Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 53/176 (30%), Positives = 89/176 (50%), Gaps = 15/176 (8%) Query: 56 GWRDFYNVRLTLSSDTFEPR-PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLA 114 GW + + R+ + PR P E++ + F K + RI+DL TG+G + + Sbjct: 103 GWEFYVDERVLI------PRSPIAEMVANRFAPFL-----KHEPTRIMDLCTGSGCIAII 151 Query: 115 LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS--SVEGLFDVIVSNP 172 + E P + +DIS AL +A+ N +G+ ++ ++SD V +D+IVSNP Sbjct: 152 MAHEFPDAEVDAIDISVDALNVAERNITDHGLEQQVIPIRSDLMRDLPVGDKYDLIVSNP 211 Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228 PY++S + L E R +P ++L G DGL + + + L DG+ VE+G Sbjct: 212 PYVDSEDMSDLPQEFR-HEPELALASGSDGLKLTKRLLANAADFLKDDGVLVVEVG 266 >gi|71899856|ref|ZP_00682005.1| Modification methylase HemK [Xylella fastidiosa Ann-1] gi|71730373|gb|EAO32455.1| Modification methylase HemK [Xylella fastidiosa Ann-1] Length = 308 Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 48/143 (33%), Positives = 78/143 (54%), Gaps = 3/143 (2%) Query: 91 PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150 P + RDV LDL TG+G + +A+ +P ++ G DIS AL +A N V ++ Sbjct: 123 PWLAGRDVRHALDLCTGSGCIAIAMGHYNPHWRVDGSDISEDALSLALENKV-RLLAHNV 181 Query: 151 DTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209 + ++SD F+ + G + +IVSNPPY+ D L E ++P + L G DGL+ I Sbjct: 182 ELIKSDVFAGLVGRRYQLIVSNPPYVTDAETDALPQEY-GYEPELGLRAGPDGLNLVLKI 240 Query: 210 ADGVSRHLNKDGLCSVEIGYNQK 232 HL+++GL E+G +++ Sbjct: 241 LCDAPAHLDEEGLLICEVGESEQ 263 >gi|260767691|ref|ZP_05876626.1| hypothetical adenine-specific methylase yfcB [Vibrio furnissii CIP 102972] gi|260617200|gb|EEX42384.1| hypothetical adenine-specific methylase yfcB [Vibrio furnissii CIP 102972] gi|315179477|gb|ADT86391.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Vibrio furnissii NCTC 11218] Length = 310 Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 41/131 (31%), Positives = 72/131 (54%), Gaps = 2/131 (1%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 RI+DL TG+G + +A P + +DIS AL++A+ N +G+ ++ ++SD F Sbjct: 134 TRIMDLCTGSGCIAIACAHAFPDAEVDAIDISADALQVAEQNIQDHGLEQQVFPIRSDLF 193 Query: 159 SSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217 + + +D+IV+NPPY++ ++ L E + +P + L G DGL R I +L Sbjct: 194 RDLPQAPYDIIVTNPPYVDQEDMNSLPDEFK-HEPELGLAAGTDGLKLVRRIMANAPNYL 252 Query: 218 NKDGLCSVEIG 228 +G+ E+G Sbjct: 253 TDNGILVCEVG 263 >gi|254497889|ref|ZP_05110654.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Legionella drancourtii LLAP12] gi|254352887|gb|EET11657.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Legionella drancourtii LLAP12] Length = 305 Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 48/144 (33%), Positives = 80/144 (55%), Gaps = 2/144 (1%) Query: 91 PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150 P I+ +V R+LDL TG+G + +A P VDIS +AL +A N GV ++ Sbjct: 126 PWIDAGNVHRVLDLCTGSGCIAIACCYAFPDAHVDAVDISSEALAVAAINREELGVEDQL 185 Query: 151 DTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209 + SD F++V + +D+IVSNPPY+ + L E R +P ++L+ +GL+ TI Sbjct: 186 TLIDSDCFANVPKVRYDLIVSNPPYVGKEEMQTLPDEFR-HEPVLALETSNNGLAIVETI 244 Query: 210 ADGVSRHLNKDGLCSVEIGYNQKV 233 +L++ G+ VE+G +++ Sbjct: 245 LKEAHAYLSEQGILVVEVGNSEEA 268 >gi|255645193|gb|ACU23094.1| unknown [Glycine max] Length = 364 Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 60/185 (32%), Positives = 87/185 (47%), Gaps = 18/185 (9%) Query: 57 WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR--ILDLGTGTGAVCLA 114 WRD L++ PRPETELLVD E D+ R DLGTG+GA+ + Sbjct: 152 WRDLV---LSVQEGVLIPRPETELLVDFVDDVV---SENEDLKRGVWADLGTGSGALAIG 205 Query: 115 ----LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS---VEGLFDV 167 L E + + D+S A+ +A N ++ + + WF +EG+ Sbjct: 206 IGGVLGSEG---RVIATDLSPVAVAVAAYNVQGYCFQDKIELREGSWFEPLKDMEGMLAG 262 Query: 168 IVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227 +VSNPPYI S + L EV +PR++LDGG DG+ + DG + L G + E Sbjct: 263 LVSNPPYIPSKDISGLQAEVGRHEPRVALDGGTDGMDALLHLCDGAALMLKPAGFSAFET 322 Query: 228 GYNQK 232 Q+ Sbjct: 323 NGEQQ 327 >gi|149195280|ref|ZP_01872368.1| modification methylase, HemK family protein [Caminibacter mediatlanticus TB-2] gi|149134544|gb|EDM23032.1| modification methylase, HemK family protein [Caminibacter mediatlanticus TB-2] Length = 273 Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 67/230 (29%), Positives = 112/230 (48%), Gaps = 36/230 (15%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALA------------FSLP-----RI 93 I I +FY + + PR +TE++V+ AL F + + Sbjct: 52 IEYIFNEIEFYGKKYYVKEGVLIPRDDTEVIVERALKLLDEELKVKSKKFKINDKLNVKN 111 Query: 94 EKRDV----VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 EK ++ ++I+D +G+G + + + + P + V DIS KA+E+AK NA + V + Sbjct: 112 EKLEINNEKLKIVDCCSGSGVIAITIKQYFPDIEVVATDISDKAIEVAKKNAKLHNVDIK 171 Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209 F + + F +G D+++SNPPY+E+ + D++P I+ GG+DGL R I Sbjct: 172 FK--KCNLFDE-KG--DILISNPPYVENSYP-----KPNDYEPDIAFYGGVDGLDIVREI 221 Query: 210 ADGVSRHLNKD-GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258 + R N + +EIGYNQK ++ + E K+ FKD N R Sbjct: 222 ---ILRAKNLEYKYAIIEIGYNQKENLSKFLED-KVKEYEFFKDLARNIR 267 >gi|257095184|ref|YP_003168825.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257047708|gb|ACV36896.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 297 Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 46/135 (34%), Positives = 76/135 (56%), Gaps = 6/135 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 +LDL TG+ CLA++ F VD+S AL +A+ N ++ R ++ D F Sbjct: 134 VLDLCTGSA--CLAIIAAHAFPAARIDAVDVSPDALVVARRNVEDYDLATRIRLVEGDLF 191 Query: 159 SSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217 + + + +D+I++NPPY+++ + L E R +P ++L G DGL R I G +HL Sbjct: 192 AGLKQRRYDLIIANPPYVKASSMATLPDEYRR-EPELALASGEDGLDLTRAILAGARKHL 250 Query: 218 NKDGLCSVEIGYNQK 232 +GL VEIG+N++ Sbjct: 251 KANGLLVVEIGHNRE 265 >gi|255071039|ref|XP_002507601.1| methyltransferase [Micromonas sp. RCC299] gi|226522876|gb|ACO68859.1| methyltransferase [Micromonas sp. RCC299] Length = 428 Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 67/234 (28%), Positives = 99/234 (42%), Gaps = 47/234 (20%) Query: 57 WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV---RILDLGTGTGAVCL 113 WRD L +S PRPETEL+V+ + R V+ +DLGTG+GA+ + Sbjct: 181 WRDLT---LVVSPAVLIPRPETELMVEHVKGA----LTTRPVLCRGPWVDLGTGSGALAI 233 Query: 114 ALLKE-----------------SPFFKGVGVDISCKALEIAKSN-----AVTNGVSERFD 151 ++ E P V DIS +++IA+ N + G Sbjct: 234 SVAAEILKTRTLNALEIGCSESKPLVHAV--DISSSSVQIARCNISRYDKLAEGGKLGVQ 291 Query: 152 TLQSDWFSSVE---------GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202 Q WF +E G I+SNPPYI S + L EVR +P ++L+ G G Sbjct: 292 VHQGSWFEPLELQDIVHDRAGTLAGIISNPPYISSNEMRVLQPEVRYHEPWLALESGKSG 351 Query: 203 LSHYRTIADGVSRHLNKDGLCSVEIGYNQKV-DVVRIFESRKLFLVNAFKDYGG 255 + + G SR+L G +E G +V VV++ S F ++ GG Sbjct: 352 VEALEVLCKGASRYLLPGGFLLLETGGGDQVTHVVQLLHS---FKKGNLRENGG 402 >gi|229522071|ref|ZP_04411488.1| hypothetical protein VIF_002616 [Vibrio cholerae TM 11079-80] gi|229340996|gb|EEO06001.1| hypothetical protein VIF_002616 [Vibrio cholerae TM 11079-80] Length = 314 Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 43/134 (32%), Positives = 73/134 (54%), Gaps = 2/134 (1%) Query: 96 RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155 + RI+DL TG+G + +A P + +DIS AL +A+ N +G+ ++ ++S Sbjct: 135 EEPTRIMDLCTGSGCIAIACANAFPEAEVDAIDISVDALNVAEQNIQDHGLEQQVFPIRS 194 Query: 156 DWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214 D F + + +D+IV+NPPY++ +D L E R +P + L G DGL R I Sbjct: 195 DLFRDLPQEQYDLIVTNPPYVDQEDMDSLPSEFR-HEPELGLAAGSDGLKLARRILANAP 253 Query: 215 RHLNKDGLCSVEIG 228 +L ++G+ E+G Sbjct: 254 LYLKENGILVCEVG 267 >gi|312601124|gb|ADQ90379.1| Protoporphyrinogen oxidase-like protein [Mycoplasma hyopneumoniae 168] Length = 238 Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 67/214 (31%), Positives = 111/214 (51%), Gaps = 24/214 (11%) Query: 28 SVLDDRQRFFLTNAI--VRSLKHE---SIHRILGWRDFYNVRLTLSSDTFEPRPETELLV 82 +L ++QR+ L I + +LK E I +I+G+ + V++ L F PR ET+ Sbjct: 9 ELLKEKQRYNLPLKISKLENLKLELDYPIQKIIGFIEMEGVKIFLDQKVFIPRYETQ--- 65 Query: 83 DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV---DISCKALEIAKS 139 + I+K D+V LDL +G+G + LAL K F + DIS +A+ AK Sbjct: 66 -ELILKIKKVIKKGDLV--LDLCSGSGFIGLALAK----FINAKITLADISDEAILQAKL 118 Query: 140 NAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG 198 NA N + + ++SD F+++ E F++IV+NPPY++ + L V +F+P+ +L Sbjct: 119 NAKYNNL--ELNIIKSDLFANIPEQKFNIIVANPPYLKE---EKLANSVLNFEPKTALFA 173 Query: 199 GIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232 + S Y I + + L +DG EI YN + Sbjct: 174 WPNPFSFYEKILEKIDNFLAEDGWIFFEIDYNSQ 207 >gi|220911261|ref|YP_002486570.1| modification methylase, HemK family [Arthrobacter chlorophenolicus A6] gi|219858139|gb|ACL38481.1| modification methylase, HemK family [Arthrobacter chlorophenolicus A6] Length = 281 Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 67/236 (28%), Positives = 96/236 (40%), Gaps = 34/236 (14%) Query: 38 LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLV--------------- 82 L + + R + + ILGW +F R+ + F PR TELLV Sbjct: 30 LADCVRRRVAGLPLEYILGWAEFDGHRMAVRPGVFVPRRRTELLVRLAAGLMSGEGNLLK 89 Query: 83 -----DSALAFSLP-----RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCK 132 DS A + R D V ++DL G+GAV AL + P + VDI Sbjct: 90 GVFPADSTFAGAAAVQGSLRSASFDGV-VVDLCCGSGAVGAALARRFPRAELHAVDIDSV 148 Query: 133 ALEIAKSNAVTNG----VSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVR 188 A+E A+SN G + FD L S V ++ N PY+ + + + E R Sbjct: 149 AVECARSNVEAVGGHVHTGDLFDALPCSLRSRVH----ILAVNAPYVPTEAIKTMPPEAR 204 Query: 189 DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 +P +SLDGG DGL +R +A G L G +E Q + + L Sbjct: 205 VHEPLLSLDGGTDGLDFHRRVAAGAKDWLAPHGCVLIETSEQQAGGTAALMAATGL 260 >gi|86742400|ref|YP_482800.1| HemK family modification methylase [Frankia sp. CcI3] gi|86569262|gb|ABD13071.1| modification methylase, HemK family [Frankia sp. CcI3] Length = 338 Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 60/224 (26%), Positives = 97/224 (43%), Gaps = 7/224 (3%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALA-FSLPRIEKRDVVR 100 + R + + + G F ++ LT+ F PRPETE +V+ AL + +R Sbjct: 101 VARRAQRVPLQHLTGVAGFRHLDLTVGPGVFIPRPETESVVEWALTELTGSAGARRPGPL 160 Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS-----ERFDTLQS 155 +DL G+GA+ L+L E P V++ A+ + N G+ Sbjct: 161 CVDLCAGSGAIALSLAAELPGATVHAVEVDPAAVVWLRRNIAGTGLPVTAHAADIAAALP 220 Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215 + + + G D+I+SNPPY+ + EV + DP +L GG DGL RT+ +R Sbjct: 221 ESLTRLAGTVDLIISNPPYLPDADRHTVEPEVGEHDPARALWGGPDGLDVVRTVVGVAAR 280 Query: 216 HLNKDGLCSVEIGYNQKVDVVRIFES-RKLFLVNAFKDYGGNDR 258 L GL +E V + + + V ++D G DR Sbjct: 281 LLRPGGLLVIEHADGHGVSAPELLRADGRWSHVADYRDLAGRDR 324 >gi|255745143|ref|ZP_05419092.1| hypothetical adenine-specific methylase yfcB [Vibrio cholera CIRS 101] gi|262153467|ref|ZP_06028597.1| hypothetical adenine-specific methylase yfcB [Vibrio cholerae INDRE 91/1] gi|262167477|ref|ZP_06035183.1| hypothetical adenine-specific methylase yfcB [Vibrio cholerae RC27] gi|262191367|ref|ZP_06049557.1| hypothetical adenine-specific methylase yfcB [Vibrio cholerae CT 5369-93] gi|255736973|gb|EET92369.1| hypothetical adenine-specific methylase yfcB [Vibrio cholera CIRS 101] gi|262024049|gb|EEY42744.1| hypothetical adenine-specific methylase yfcB [Vibrio cholerae RC27] gi|262030704|gb|EEY49338.1| hypothetical adenine-specific methylase yfcB [Vibrio cholerae INDRE 91/1] gi|262032742|gb|EEY51290.1| hypothetical adenine-specific methylase yfcB [Vibrio cholerae CT 5369-93] gi|327484646|gb|AEA79053.1| Ribosomal protein L3 methyltransferase [Vibrio cholerae LMA3894-4] Length = 310 Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 43/134 (32%), Positives = 73/134 (54%), Gaps = 2/134 (1%) Query: 96 RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155 + RI+DL TG+G + +A P + +DIS AL +A+ N +G+ ++ ++S Sbjct: 131 EEPTRIMDLCTGSGCIAIACANAFPEAEVDAIDISVDALNVAEQNIQDHGLEQQVFPIRS 190 Query: 156 DWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214 D F + + +D+IV+NPPY++ +D L E R +P + L G DGL R I Sbjct: 191 DLFRDLPQEQYDLIVTNPPYVDQEDMDSLPSEFR-HEPELGLAAGSDGLKLARRILANAP 249 Query: 215 RHLNKDGLCSVEIG 228 +L ++G+ E+G Sbjct: 250 LYLKENGILVCEVG 263 >gi|15594542|ref|NP_212331.1| protoporphyrinogen oxidase, putative [Borrelia burgdorferi B31] gi|2688095|gb|AAC66591.1| protoporphyrinogen oxidase, putative [Borrelia burgdorferi B31] Length = 286 Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 53/183 (28%), Positives = 94/183 (51%), Gaps = 20/183 (10%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110 IH IL ++F + +L+ PR +TE L + AL +I++ +ILDL G+G Sbjct: 64 IHYILQKKEFMGIEFSLNKHVLIPRFDTECLAEEALI----QIQQNGFKKILDLCCGSGC 119 Query: 111 VCLALLKESPFF---KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDV 167 + L++ ++ K + DIS KAL+I + N + + + + S+ ++G D+ Sbjct: 120 IGLSI----AYYIRKKVILSDISTKALQIVEKNTKKLKLEKFVEIIHSNLLKCIKGKLDI 175 Query: 168 IVSNPPYIESVIVDCLGLEVRD---FDPRISLDG-GIDGLSHYRTIADGVSRHLNKDGLC 223 I++NPPY+ LE+++ +P +L G G DGL+ R I + L+ +GL Sbjct: 176 IITNPPYLNKE-----ELEIKNKIKKEPTKALLGFGKDGLNISRKILNQAKEKLSPNGLI 230 Query: 224 SVE 226 +E Sbjct: 231 IIE 233 >gi|91784134|ref|YP_559340.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Burkholderia xenovorans LB400] gi|91688088|gb|ABE31288.1| [LSU ribosomal protein L3P]-glutamine N5-methyltransferase [Burkholderia xenovorans LB400] Length = 294 Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 58/175 (33%), Positives = 86/175 (49%), Gaps = 11/175 (6%) Query: 91 PRIE-KRDVVRILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVS 147 P +E V +L+L TG+G CLA+L F VD+S ALE+A N + Sbjct: 119 PYVEDPEQVSAVLELCTGSG--CLAILAAHAFPNADIDAVDLSAPALEVATRNVTDYKLD 176 Query: 148 ERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206 +R + D ++ + E +DVI+SNPPY+ + + L E R +P ++L GG DG+ Sbjct: 177 DRIALFEGDLYAPLAERRYDVIISNPPYVNAASMQELPAEYR-HEPDMALAGGADGMDIV 235 Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 R I L DG+ VEIG N++ V F L ++ G+D V L Sbjct: 236 RRIIADARNWLTDDGVLVVEIG-NERQHVEAAFGGLDLVWLST---SAGDDNVFL 286 >gi|15642117|ref|NP_231749.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121586816|ref|ZP_01676598.1| adenine-specific methylase, putative [Vibrio cholerae 2740-80] gi|121727216|ref|ZP_01680383.1| adenine-specific methylase, putative [Vibrio cholerae V52] gi|147673603|ref|YP_001217639.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Vibrio cholerae O395] gi|153213246|ref|ZP_01948658.1| adenine-specific methylase, putative [Vibrio cholerae 1587] gi|153803027|ref|ZP_01957613.1| adenine-specific methylase, putative [Vibrio cholerae MZO-3] gi|153818977|ref|ZP_01971644.1| adenine-specific methylase, putative [Vibrio cholerae NCTC 8457] gi|153822882|ref|ZP_01975549.1| adenine-specific methylase, putative [Vibrio cholerae B33] gi|153825591|ref|ZP_01978258.1| adenine-specific methylase, putative [Vibrio cholerae MZO-2] gi|153828601|ref|ZP_01981268.1| putative adenine-specific methylase [Vibrio cholerae 623-39] gi|227082243|ref|YP_002810794.1| putative adenine-specific methylase [Vibrio cholerae M66-2] gi|229507797|ref|ZP_04397302.1| hypothetical protein VCF_003026 [Vibrio cholerae BX 330286] gi|229511966|ref|ZP_04401445.1| hypothetical protein VCE_003376 [Vibrio cholerae B33] gi|229513769|ref|ZP_04403231.1| hypothetical protein VCB_001414 [Vibrio cholerae TMA 21] gi|229519102|ref|ZP_04408545.1| hypothetical protein VCC_003130 [Vibrio cholerae RC9] gi|229524120|ref|ZP_04413525.1| hypothetical protein VCA_001704 [Vibrio cholerae bv. albensis VL426] gi|229528870|ref|ZP_04418260.1| hypothetical protein VCG_001960 [Vibrio cholerae 12129(1)] gi|229607342|ref|YP_002877990.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Vibrio cholerae MJ-1236] gi|254226355|ref|ZP_04919944.1| adenine-specific methylase, putative [Vibrio cholerae V51] gi|254291354|ref|ZP_04962147.1| adenine-specific methylase, putative [Vibrio cholerae AM-19226] gi|254849203|ref|ZP_05238553.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Vibrio cholerae MO10] gi|298497860|ref|ZP_07007667.1| protein-(glutamine-N5) methyltransferase, LSU ribosomal protein L3-specific [Vibrio cholerae MAK 757] gi|18203198|sp|Q9KQ83|Y2118_VIBCH RecName: Full=Uncharacterized adenine-specific methylase VC_2118 gi|9656668|gb|AAF95263.1| adenine-specific methylase, putative [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121548983|gb|EAX59022.1| adenine-specific methylase, putative [Vibrio cholerae 2740-80] gi|121630461|gb|EAX62854.1| adenine-specific methylase, putative [Vibrio cholerae V52] gi|124116046|gb|EAY34866.1| adenine-specific methylase, putative [Vibrio cholerae 1587] gi|124121425|gb|EAY40168.1| adenine-specific methylase, putative [Vibrio cholerae MZO-3] gi|125621105|gb|EAZ49450.1| adenine-specific methylase, putative [Vibrio cholerae V51] gi|126510472|gb|EAZ73066.1| adenine-specific methylase, putative [Vibrio cholerae NCTC 8457] gi|126519578|gb|EAZ76801.1| adenine-specific methylase, putative [Vibrio cholerae B33] gi|146315486|gb|ABQ20025.1| putative adenine-specific methylase [Vibrio cholerae O395] gi|148875872|gb|EDL74007.1| putative adenine-specific methylase [Vibrio cholerae 623-39] gi|149740742|gb|EDM54841.1| adenine-specific methylase, putative [Vibrio cholerae MZO-2] gi|150422684|gb|EDN14638.1| adenine-specific methylase, putative [Vibrio cholerae AM-19226] gi|227010131|gb|ACP06343.1| putative adenine-specific methylase [Vibrio cholerae M66-2] gi|227014014|gb|ACP10224.1| putative adenine-specific methylase [Vibrio cholerae O395] gi|229332644|gb|EEN98130.1| hypothetical protein VCG_001960 [Vibrio cholerae 12129(1)] gi|229337701|gb|EEO02718.1| hypothetical protein VCA_001704 [Vibrio cholerae bv. albensis VL426] gi|229343791|gb|EEO08766.1| hypothetical protein VCC_003130 [Vibrio cholerae RC9] gi|229348950|gb|EEO13907.1| hypothetical protein VCB_001414 [Vibrio cholerae TMA 21] gi|229351931|gb|EEO16872.1| hypothetical protein VCE_003376 [Vibrio cholerae B33] gi|229355302|gb|EEO20223.1| hypothetical protein VCF_003026 [Vibrio cholerae BX 330286] gi|229369997|gb|ACQ60420.1| hypothetical protein VCD_002253 [Vibrio cholerae MJ-1236] gi|254844908|gb|EET23322.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Vibrio cholerae MO10] gi|297542193|gb|EFH78243.1| protein-(glutamine-N5) methyltransferase, LSU ribosomal protein L3-specific [Vibrio cholerae MAK 757] Length = 314 Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 43/134 (32%), Positives = 73/134 (54%), Gaps = 2/134 (1%) Query: 96 RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155 + RI+DL TG+G + +A P + +DIS AL +A+ N +G+ ++ ++S Sbjct: 135 EEPTRIMDLCTGSGCIAIACANAFPEAEVDAIDISVDALNVAEQNIQDHGLEQQVFPIRS 194 Query: 156 DWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214 D F + + +D+IV+NPPY++ +D L E R +P + L G DGL R I Sbjct: 195 DLFRDLPQEQYDLIVTNPPYVDQEDMDSLPSEFR-HEPELGLAAGSDGLKLARRILANAP 253 Query: 215 RHLNKDGLCSVEIG 228 +L ++G+ E+G Sbjct: 254 LYLKENGILVCEVG 267 >gi|226321515|ref|ZP_03797041.1| putative protoporphyrinogen oxidase [Borrelia burgdorferi Bol26] gi|226232704|gb|EEH31457.1| putative protoporphyrinogen oxidase [Borrelia burgdorferi Bol26] Length = 286 Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 53/183 (28%), Positives = 94/183 (51%), Gaps = 20/183 (10%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110 IH IL ++F + +L+ PR +TE L + AL +I++ +ILDL G+G Sbjct: 64 IHYILQKKEFMGIEFSLNKHVLIPRFDTECLAEEALI----QIQQNGFKKILDLCCGSGC 119 Query: 111 VCLALLKESPFF---KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDV 167 + L++ ++ K + DIS KAL+I + N + + + + S+ ++G D+ Sbjct: 120 IGLSI----AYYIRKKVILSDISTKALQIVEKNTKKLKLEKFVEIIHSNLLKCIKGKLDI 175 Query: 168 IVSNPPYIESVIVDCLGLEVRD---FDPRISLDG-GIDGLSHYRTIADGVSRHLNKDGLC 223 I++NPPY+ LE+++ +P +L G G DGL+ R I + L+ +GL Sbjct: 176 IITNPPYLNKE-----ELEIKNKIKKEPTKALLGFGKDGLNISRKILNQAKEKLSPNGLI 230 Query: 224 SVE 226 +E Sbjct: 231 IIE 233 >gi|237748727|ref|ZP_04579207.1| modification methylase HemK [Oxalobacter formigenes OXCC13] gi|229380089|gb|EEO30180.1| modification methylase HemK [Oxalobacter formigenes OXCC13] Length = 302 Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 60/189 (31%), Positives = 94/189 (49%), Gaps = 13/189 (6%) Query: 78 TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALE 135 EL+V+ FS I+ V IL+L TG+G CLA++ F V++S AL Sbjct: 114 AELIVEQ---FSPWIIDPEGVTDILELCTGSG--CLAIMLADVFENATVDAVELSPAALG 168 Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194 IA++N + +R +D + + + + +IV+NPPY+ +D L E +P++ Sbjct: 169 IAQTNINNYQLKDRVKLHHADLYDGIPDKQYQLIVTNPPYVNQSSMDDLPPEYM-HEPQM 227 Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYG 254 +L GG DG+ R I L DGL VEIG N+ + + F +L ++ G Sbjct: 228 ALAGGFDGMDIVRRIVRTAGEKLTDDGLLIVEIG-NEAENAIAAFPELELTWLST---SG 283 Query: 255 GNDRVLLFC 263 G+DRV L Sbjct: 284 GDDRVFLLT 292 >gi|195941928|ref|ZP_03087310.1| protoporphyrinogen oxidase, putative [Borrelia burgdorferi 80a] gi|216264489|ref|ZP_03436481.1| putative protoporphyrinogen oxidase [Borrelia burgdorferi 156a] gi|223889246|ref|ZP_03623834.1| putative protoporphyrinogen oxidase [Borrelia burgdorferi 64b] gi|226320938|ref|ZP_03796486.1| putative protoporphyrinogen oxidase [Borrelia burgdorferi 29805] gi|215980962|gb|EEC21769.1| putative protoporphyrinogen oxidase [Borrelia burgdorferi 156a] gi|223885279|gb|EEF56381.1| putative protoporphyrinogen oxidase [Borrelia burgdorferi 64b] gi|226233640|gb|EEH32373.1| putative protoporphyrinogen oxidase [Borrelia burgdorferi 29805] Length = 286 Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 53/183 (28%), Positives = 94/183 (51%), Gaps = 20/183 (10%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110 IH IL ++F + +L+ PR +TE L + AL +I++ +ILDL G+G Sbjct: 64 IHYILQKKEFMGIEFSLNKHVLIPRFDTECLAEEALI----QIQQNGFKKILDLCCGSGC 119 Query: 111 VCLALLKESPFF---KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDV 167 + L++ ++ K + DIS KAL+I + N + + + + S+ ++G D+ Sbjct: 120 IGLSI----AYYIRKKVILSDISTKALQIVEKNTKKLKLEKFVEIIHSNLLKCIKGKLDI 175 Query: 168 IVSNPPYIESVIVDCLGLEVRD---FDPRISLDG-GIDGLSHYRTIADGVSRHLNKDGLC 223 I++NPPY+ LE+++ +P +L G G DGL+ R I + L+ +GL Sbjct: 176 IITNPPYLNKE-----ELEIKNKIKKEPTKALLGFGKDGLNISRKILNQAKEKLSPNGLI 230 Query: 224 SVE 226 +E Sbjct: 231 IIE 233 >gi|149928199|ref|ZP_01916444.1| N5-glutamine methyltransferase [Limnobacter sp. MED105] gi|149823090|gb|EDM82330.1| N5-glutamine methyltransferase [Limnobacter sp. MED105] Length = 304 Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 48/137 (35%), Positives = 76/137 (55%), Gaps = 7/137 (5%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 ILD+ TG+G CLA+L F VD+S +AL IA+ N + + +R ++SD Sbjct: 140 EILDMCTGSG--CLAILAAYVFENAQVDAVDLSTEALSIARENIQLHDMKQRVHAIESDL 197 Query: 158 FSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216 FS++ G +D I++NPPY+ + L E +PR++L GG G+ + I + +H Sbjct: 198 FSNLNGKQYDFILTNPPYVNEASMKKLPPEYL-HEPRMALAGGDSGMDLIQDILEQAPKH 256 Query: 217 LNKDGLCSVEIGYNQKV 233 L G VE+G N+K+ Sbjct: 257 LKDGGFLVVELG-NEKL 272 >gi|297565961|ref|YP_003684933.1| modification methylase, HemK family [Meiothermus silvanus DSM 9946] gi|296850410|gb|ADH63425.1| modification methylase, HemK family [Meiothermus silvanus DSM 9946] Length = 288 Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 63/217 (29%), Positives = 99/217 (45%), Gaps = 16/217 (7%) Query: 54 ILGWRDFY----------NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103 ILG+ FY +RL + PRPETE LV+ LA L E+ R+LD Sbjct: 71 ILGYSLFYVPGLKEDEGGYLRLEVRPGVLIPRPETERLVE--LALGLLSAERSFTGRLLD 128 Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG 163 +GTG+GA+ LAL + P + +I A+ +A+ NA G+ L + + + ++ Sbjct: 129 VGTGSGAIALALKRRCPKAEVWATEIDPAAVALARENARRAGLE--VQVLLAPFTAHLKA 186 Query: 164 LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223 L D+IVSNPPY+ E+ +P+ +L G +GL R + R L G Sbjct: 187 L-DLIVSNPPYLPESYRQEAPPELSYENPQ-ALYSGPEGLDMPRELLRHAWRALKPGGAL 244 Query: 224 SVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 ++E+ + + + V +D G R L Sbjct: 245 ALELAESNVHTLAEEAQRAGWEAVQVHRDLAGRPRYL 281 >gi|308235423|ref|ZP_07666160.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Gardnerella vaginalis ATCC 14018] Length = 306 Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 59/200 (29%), Positives = 98/200 (49%), Gaps = 21/200 (10%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101 I R E + I+G F + L + F PRPETE++V L + K +V Sbjct: 70 ISRRASREPLQHIIGCATFRYIDLIVGKGVFVPRPETEVVVQEGLDWIRANNLKNPIV-- 127 Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS------ 155 LDL G+GA+ L++ E + V+ S KA E + N N ++E+++ L Sbjct: 128 LDLCAGSGAIGLSVASEVADAQVWAVEKSPKAFEYLQKN--YNKIAEKYNILNRYHAILG 185 Query: 156 -------DWFSSVEGLFDVIVSNPPYI-ESVIVDCLGLEVRDFDPRISLDGG-IDGLSHY 206 ++++ DV+++NPPY+ ES V+ +E RD+DP+++L GG DGL Sbjct: 186 DATNVNLPEKAAIKEKVDVVITNPPYVPESQPVE--QIEARDYDPKMALYGGSQDGLLIP 243 Query: 207 RTIADGVSRHLNKDGLCSVE 226 + I +L + G+ +E Sbjct: 244 QKIVKASFAYLRRGGIMIME 263 >gi|146329306|ref|YP_001209561.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Dichelobacter nodosus VCS1703A] gi|146232776|gb|ABQ13754.1| modification methylase, HemK family [Dichelobacter nodosus VCS1703A] Length = 300 Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 60/205 (29%), Positives = 95/205 (46%), Gaps = 6/205 (2%) Query: 30 LDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN-VRLTLSSDTFEPRPETELLVDSALAF 88 L D++ L +A R ++ L R Y + PR L+D LA Sbjct: 59 LTDKECALLADAFRRRIEERLPVPYLTQRTLYGGYEFYIDERALIPRSPIAELIDRGLA- 117 Query: 89 SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148 P + D RILDL G+G + + P + V DI +AL +A N + + Sbjct: 118 --PYWQGDDPERILDLCCGSGCIGILAKYHYPDAEVVLADIDEQALAVAAINLQRAAMED 175 Query: 149 R-FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207 + +QSD F++V G FD I+ NPPY+E+ + + E +PR +L G DGL R Sbjct: 176 DGVEIVQSDIFTAVTGTFDWILCNPPYVEAEEMATIAAEYC-HEPRQALVSGADGLDLTR 234 Query: 208 TIADGVSRHLNKDGLCSVEIGYNQK 232 I + +LN +G+ +E+G + + Sbjct: 235 RILSQAAHYLNDNGVLILEVGMSWQ 259 >gi|91792893|ref|YP_562544.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Shewanella denitrificans OS217] gi|91714895|gb|ABE54821.1| modification methylase, HemK family [Shewanella denitrificans OS217] Length = 314 Score = 75.5 bits (184), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 52/151 (34%), Positives = 83/151 (54%), Gaps = 4/151 (2%) Query: 91 PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150 P + + V R++DL TG+G + +A + +DIS ALE+A+ N + GV +R Sbjct: 127 PWLYNKQVNRVMDLCTGSGCIAIACAYLFEDAEVDALDISEDALEVAQINIESLGVMDRV 186 Query: 151 DTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208 +QSD FSS+ +D+IVSNPPY+++ + + E +P I L G DGL + Sbjct: 187 FPIQSDVFSSIPKGPQYDLIVSNPPYVDAEDIGDMPDEYH-HEPAIGLASGRDGLDLTKR 245 Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 I + +L +DG+ VE+G N V ++ F Sbjct: 246 ILANAADYLTQDGVLVVEVG-NSMVHLMEQF 275 >gi|119715987|ref|YP_922952.1| HemK family modification methylase [Nocardioides sp. JS614] gi|119536648|gb|ABL81265.1| modification methylase, HemK family [Nocardioides sp. JS614] Length = 292 Score = 75.5 bits (184), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 63/227 (27%), Positives = 96/227 (42%), Gaps = 12/227 (5%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELL----VDSALAFSLPR----- 92 + R E + + G F +V + + F PRPETELL ++ L +S R Sbjct: 60 VARRAAREPLQHLTGSVGFRHVEVAVGPGVFVPRPETELLAGWAIEQCLRWSSSRRVGGA 119 Query: 93 IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152 R+ V ++DL TG+GAV A+ E P V++ +A A N V R Sbjct: 120 TAGRNPV-VVDLCTGSGAVAKAIADEVPTADVHAVELDEEAHRWAGRNLARTTVDLRLGD 178 Query: 153 LQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212 + + F + G D++ NPPYI + + E RD DP ++L G DGL R + Sbjct: 179 MATA-FDDLLGQVDIVTCNPPYIPLDAWESVAPEARDHDPHLALFSGADGLDAIRALERR 237 Query: 213 VSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL-VNAFKDYGGNDR 258 + L G+ E Q +F + ++ V D G R Sbjct: 238 AAELLRPGGVVGFEHADVQGESAPAVFTATDRWVDVRDHDDLAGRAR 284 >gi|261416347|ref|YP_003250030.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Fibrobacter succinogenes subsp. succinogenes S85] gi|261372803|gb|ACX75548.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Fibrobacter succinogenes subsp. succinogenes S85] Length = 326 Score = 75.5 bits (184), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 67/233 (28%), Positives = 96/233 (41%), Gaps = 43/233 (18%) Query: 38 LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97 L + R E + I+G F + PRPETE LVD A + SL IEK Sbjct: 63 LRTMVARRATREPLQHIIGDTSFRGFIIKCDRRALIPRPETESLVDMA-SDSLKGIEKPF 121 Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS---------- 147 +V I GTGTGA+ +A KE K + D+S AL +A++NA N ++ Sbjct: 122 IVEI---GTGTGAISIACAKEIAGAKVLATDVSEDALALARTNAEANDLAGNPDAESAAS 178 Query: 148 -------------------------ERFDTLQSDWFSSVEG----LFDVIVSNPPYIESV 178 + + + +D ++V G D +++N PYI Sbjct: 179 STGSTASASSASSANEASSLTFAQGDLLNAITADVIANVAGDSSAKIDCLIANLPYIPDS 238 Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231 D L EV +DP ++L GG DGL R + L +EIG Q Sbjct: 239 EKDKLQPEVAKYDPALALFGGEDGLDLVRKLLQQTEGKLKPGASILLEIGSEQ 291 >gi|113461496|ref|YP_719565.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Haemophilus somnus 129PT] gi|170718390|ref|YP_001783613.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Haemophilus somnus 2336] gi|112823539|gb|ABI25628.1| [LSU ribosomal protein L3P]-glutamine N5-methyltransferase [Haemophilus somnus 129PT] gi|168826519|gb|ACA31890.1| modification methylase, HemK family [Haemophilus somnus 2336] Length = 317 Score = 75.5 bits (184), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 44/146 (30%), Positives = 83/146 (56%), Gaps = 3/146 (2%) Query: 95 KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154 ++D +RILDL TG+G + +A ++ + VD+S AL +A+ N + ++ R +Q Sbjct: 141 QQDPIRILDLCTGSGCIAIACAEQFTHAEVDAVDLSIDALNVAEINIERHNLTHRVFPIQ 200 Query: 155 SDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213 SD F ++ +D+I++NPPY++ + + +E +P ++L GIDGL+ + I Sbjct: 201 SDLFKNLPLDQYDLIITNPPYVDEEDLQDMPIEFHH-EPEMALGSGIDGLTITKEILANS 259 Query: 214 SRHLNKDGLCSVEIGYNQKVDVVRIF 239 + +L +G+ E+G N V ++ F Sbjct: 260 ADYLTDNGILICEVG-NSMVHLIEQF 284 >gi|241667313|ref|ZP_04754891.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254875865|ref|ZP_05248575.1| modification methylase [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254841886|gb|EET20300.1| modification methylase [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 314 Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 55/207 (26%), Positives = 106/207 (51%), Gaps = 10/207 (4%) Query: 29 VLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAF 88 +L + ++ + R+ + + + IL F + + PR L+ + + Sbjct: 69 LLKEEKQKIIEYVYQRTCQRKPLPYILKKAWFAGMEFDIDERVIIPRSPIAELIRNEFSP 128 Query: 89 SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG---VDISCKALEIAKSNAVTNG 145 + I+ DV +LDL TG+G + +A S F+ VDIS AL +A N + Sbjct: 129 WINDID--DVTNVLDLCTGSGCIGIAC---SNVFEDANITLVDISDDALAVANHNIKKHQ 183 Query: 146 VSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204 +S+R ++SD F +++G +D+IVSNPPY++ ++ + E ++P+++L+ G DGL Sbjct: 184 LSDRVKAVKSDLFDNLQGQKYDLIVSNPPYVDREDLNSMPQEYH-YEPKLALEAGNDGLD 242 Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQ 231 + I +++ + G+ VE+G +Q Sbjct: 243 LAKRIILEADQYMTEKGVLIVEVGNSQ 269 >gi|167626734|ref|YP_001677234.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|167596735|gb|ABZ86733.1| modification methylase, HemK family [Francisella philomiragia subsp. philomiragia ATCC 25017] Length = 314 Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 55/207 (26%), Positives = 106/207 (51%), Gaps = 10/207 (4%) Query: 29 VLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAF 88 +L + ++ + R+ + + + IL F + + PR L+ + + Sbjct: 69 LLKEEKQKIIEYVYQRTCQRKPLPYILKKAWFAGMEFDIDERVIIPRSPIAELIRNEFSP 128 Query: 89 SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG---VDISCKALEIAKSNAVTNG 145 + I+ DV +LDL TG+G + +A S F+ VDIS AL +A N + Sbjct: 129 WINDID--DVTNVLDLCTGSGCIGIAC---SNVFEDANITLVDISDDALAVANHNIKKHQ 183 Query: 146 VSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204 +S+R ++SD F +++G +D+IVSNPPY++ ++ + E ++P+++L+ G DGL Sbjct: 184 LSDRVKAVKSDLFDNLQGQKYDLIVSNPPYVDREDLNSMPQEYH-YEPKLALEAGDDGLD 242 Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQ 231 + I +++ + G+ VE+G +Q Sbjct: 243 LAKRIILEADQYMTEKGVLIVEVGNSQ 269 >gi|300115419|ref|YP_003761994.1| ribosomal protein L3-specific protein-(glutamine-N5) methyltransferase [Nitrosococcus watsonii C-113] gi|299541356|gb|ADJ29673.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Nitrosococcus watsonii C-113] Length = 303 Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 48/157 (30%), Positives = 78/157 (49%), Gaps = 2/157 (1%) Query: 91 PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150 P + V +LDL TG+G + +A P + DIS +AL +A+ N +G+ + Sbjct: 128 PFVTLESVHTLLDLCTGSGCIAIATAHAFPEAQVDATDISEEALAVARMNIERHGLEAQV 187 Query: 151 DTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209 S F + G +D+IVSNPPY+ + L E +PR +L+ +GLS I Sbjct: 188 HAFSSSLFQKLGGRRYDLIVSNPPYVGQAELAALAREYHH-EPRQALETEEEGLSIVLQI 246 Query: 210 ADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246 HLN+ G+ VE+G+++ R+ + L+L Sbjct: 247 LQQAPEHLNEKGILVVEVGHSEAALTERLPQVPFLWL 283 >gi|268601733|ref|ZP_06135900.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Neisseria gonorrhoeae PID18] gi|268585864|gb|EEZ50540.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Neisseria gonorrhoeae PID18] Length = 243 Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 43/114 (37%), Positives = 64/114 (56%), Gaps = 2/114 (1%) Query: 91 PRIEKRDVVR-ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 P IE ++V LDL TG+G + + + P + VD+S ALE+A N G+ ER Sbjct: 127 PWIEYDELVHNALDLCTGSGCLAIQMAHHYPDAQIDAVDVSLDALEVAGINIEDYGLEER 186 Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203 + +D F +EG +D+IVSNPPY+++ V L E +P ++L G DGL Sbjct: 187 IQLIHTDLFEGLEGTYDLIVSNPPYVDAESVGALPEEYL-HEPELALGSGADGL 239 >gi|311114830|ref|YP_003986051.1| protein-(glutamine-N5) methyltransferase [Gardnerella vaginalis ATCC 14019] gi|310946324|gb|ADP39028.1| protein-(glutamine-N5) methyltransferase [Gardnerella vaginalis ATCC 14019] Length = 302 Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 59/200 (29%), Positives = 98/200 (49%), Gaps = 21/200 (10%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101 I R E + I+G F + L + F PRPETE++V L + K +V Sbjct: 66 ISRRASREPLQHIIGCATFRYIDLIVGKGVFVPRPETEVVVQEGLDWIRANNLKNPIV-- 123 Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS------ 155 LDL G+GA+ L++ E + V+ S KA E + N N ++E+++ L Sbjct: 124 LDLCAGSGAIGLSVASEVADAQVWAVEKSPKAFEYLQKN--YNKIAEKYNILNRYHAILG 181 Query: 156 -------DWFSSVEGLFDVIVSNPPYI-ESVIVDCLGLEVRDFDPRISLDGG-IDGLSHY 206 ++++ DV+++NPPY+ ES V+ +E RD+DP+++L GG DGL Sbjct: 182 DATNVNLPEKAAIKEKVDVVITNPPYVPESQPVE--QIEARDYDPKMALYGGSQDGLLIP 239 Query: 207 RTIADGVSRHLNKDGLCSVE 226 + I +L + G+ +E Sbjct: 240 QKIVKASFAYLRRGGIMIME 259 >gi|295676837|ref|YP_003605361.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Burkholderia sp. CCGE1002] gi|295436680|gb|ADG15850.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Burkholderia sp. CCGE1002] Length = 294 Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 56/176 (31%), Positives = 88/176 (50%), Gaps = 11/176 (6%) Query: 91 PRIE-KRDVVRILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVS 147 P +E V +L+L TG+G CLA+L F VD+S ALE+A N + + Sbjct: 119 PYVEDPEQVAAVLELCTGSG--CLAILAAHAFPNADVDAVDLSAPALEVATRNVLDYHLD 176 Query: 148 ERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206 +R + D ++ + E +DVI+SNPPY+ + + L E + +P ++L GG DG+ Sbjct: 177 DRIALFEGDLYAPLAERRYDVIISNPPYVNAKSMQELPAEYK-HEPEMALAGGADGMDIV 235 Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262 R I L +DG+ +EIG N++ V F L ++ G+D V L Sbjct: 236 RRIIADARNWLTEDGVLVIEIG-NEREHVEAAFGGLDLVWLST---SAGDDNVFLI 287 >gi|85711980|ref|ZP_01043034.1| Modification methylase, HemK family protein [Idiomarina baltica OS145] gi|85694166|gb|EAQ32110.1| Modification methylase, HemK family protein [Idiomarina baltica OS145] Length = 308 Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 46/130 (35%), Positives = 74/130 (56%), Gaps = 2/130 (1%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+LD+ TG+G + +A P + DIS AL +A+ N +G+ E+ +QSD F+ Sbjct: 135 RVLDMCTGSGCIAVACAYAFPEAEIDATDISADALSVAEFNIGEHGLEEQVFPIQSDIFT 194 Query: 160 SVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 ++G +D+IV+NPPY+++ + L E R +P + L G DGLS T+ + HL Sbjct: 195 GLQGQQYDLIVTNPPYVDAEDMSDLPDEFR-HEPELGLAAGDDGLSLVDTMLLEAADHLT 253 Query: 219 KDGLCSVEIG 228 +GL E+G Sbjct: 254 DNGLLFCEVG 263 >gi|119025460|ref|YP_909305.1| methylase protein [Bifidobacterium adolescentis ATCC 15703] gi|118765044|dbj|BAF39223.1| possible methylase protein [Bifidobacterium adolescentis ATCC 15703] Length = 306 Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 63/232 (27%), Positives = 99/232 (42%), Gaps = 18/232 (7%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101 + R +K E + I G F + L + F PRPETEL+V + ++ R ++ Sbjct: 72 LARRVKREPLQHITGHAPFRYLDLKVGPGVFIPRPETELVVQEGVDWATRNGMYR--AKV 129 Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF----------- 150 +DL G+GA+ LA E P + V+ S E N + ++R+ Sbjct: 130 VDLCAGSGAIGLAFASEVPGSEVWAVEKSATTAEWTWRN--LDETAKRYPAIAGNYHLDI 187 Query: 151 -DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG-IDGLSHYRT 208 D Q S ++G D++++NPPY+ + EVRD+DP ++L GG DG Sbjct: 188 ADATQMPTLSQLDGTIDIVLTNPPYVPLADIPEQS-EVRDYDPDLALYGGSADGTLIPER 246 Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 I ++ L GL +E Q + + V DY G R L Sbjct: 247 IIARAAKLLRAGGLMVMEHDITQGERLAAFARTCGFVDVTVHNDYTGRPRYL 298 >gi|139439317|ref|ZP_01772759.1| Hypothetical protein COLAER_01775 [Collinsella aerofaciens ATCC 25986] gi|133775341|gb|EBA39161.1| Hypothetical protein COLAER_01775 [Collinsella aerofaciens ATCC 25986] Length = 418 Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 50/145 (34%), Positives = 76/145 (52%), Gaps = 7/145 (4%) Query: 98 VVRILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSN----AVTNG-VSERFD 151 RIL++G GTG + L+L E DI +A+++A N +T+G V+ Sbjct: 239 TARILEVGCGTGCISLSLAWERRGHVACTATDIEPRAIDLATKNRDALGLTSGEVAFSLT 298 Query: 152 TLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIAD 211 L S G FDV+VSNPPYI + ++ L EV+DF+P ++L+GG DGL +R + + Sbjct: 299 NLVSSIPHDEWGTFDVLVSNPPYIPTDVMRSLPHEVKDFEPDLALEGGADGLDIFRRLLN 358 Query: 212 GVSRHLNKDGLCSVEIGYNQKVDVV 236 L GL + E+ Y +D Sbjct: 359 AAPYMLRAGGLFACEL-YEGALDAA 382 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 26/79 (32%), Positives = 38/79 (48%) Query: 10 FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69 LC TGL+ + + D LD Q + A+VR K E + I G F + + + Sbjct: 34 LLCAATGLARIDLYMRMDETLDAAQLETMHAAVVRRAKGEPLQYITGSTQFRMIDVACAP 93 Query: 70 DTFEPRPETELLVDSALAF 88 PRPETE+LV+ L + Sbjct: 94 GVLIPRPETEMLVEEVLNY 112 >gi|325578261|ref|ZP_08148396.1| protein-(glutamine-N5) methyltransferase [Haemophilus parainfluenzae ATCC 33392] gi|325159997|gb|EGC72126.1| protein-(glutamine-N5) methyltransferase [Haemophilus parainfluenzae ATCC 33392] Length = 314 Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 52/181 (28%), Positives = 89/181 (49%), Gaps = 7/181 (3%) Query: 60 FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119 F + + T PR L+ A L K + RILDL TG+G + +A + Sbjct: 108 FCGLEFYVDERTIIPRSPISALIQDKFAPLL----KSEPKRILDLCTGSGCIAIATAEAF 163 Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESV 178 P + VD+S AL +A+ N + + R +QSD F ++ G +D+IV+NPPY++ Sbjct: 164 PEAEVDAVDLSVDALNVAEINIARHQLEHRVFPIQSDLFQNLFGQQYDLIVTNPPYVDEE 223 Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238 + + E ++P ++L G+DGL + I +L +G+ E+G N V ++ Sbjct: 224 DLADMPEEFH-YEPELALGSGVDGLEITKQILKQAPDYLTPNGMLICEVG-NSMVSLIEQ 281 Query: 239 F 239 + Sbjct: 282 Y 282 >gi|154249579|ref|YP_001410404.1| HemK family modification methylase [Fervidobacterium nodosum Rt17-B1] gi|154153515|gb|ABS60747.1| modification methylase, HemK family [Fervidobacterium nodosum Rt17-B1] Length = 258 Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 72/266 (27%), Positives = 125/266 (46%), Gaps = 35/266 (13%) Query: 11 LCRVTGLSSHQVIVDPDSVLDDRQRFFLTN-----------AIVRSLKHESIHRILGWRD 59 L + GL + ++ VL+ + F +++ + + L + ILG + Sbjct: 9 LYKEKGLPEREALILISKVLERSKEFVISHDELECPEQAIELLEKRLTGYPLQYILGEVE 68 Query: 60 FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119 F+ + + PR ETE LV+ A+ I K + ++L++G G+G + + L E+ Sbjct: 69 FFGRKFYIEEGVLIPRWETEGLVEIAIDL----IRKNGIKKVLEIGVGSGVILITLALET 124 Query: 120 PFFKGV---GVDISCKALEIAKSNAVTNGVSERFDTLQ-SDWFSSVEGLFDVIVSNPPYI 175 GV G DI+ KA+E+ + N+ VS + ++ F F++IVSNPPY+ Sbjct: 125 ----GVECYGTDINPKAIEVTRKNSQMYDVSCELKLGEYAEPFIEKFDEFELIVSNPPYV 180 Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235 + V L +EV+ ++P +L G DGL Y+ + R+ + + +EIG +Q + Sbjct: 181 RADAV--LPIEVQ-YEPPDALFAGKDGLDFYKKFFE---RYNIQGKIVVMEIGEDQGEAL 234 Query: 236 VRIFESRKLFLVNAFKDYGGNDRVLL 261 RKL KD G DR L+ Sbjct: 235 ------RKLTGGEILKDLAGKDRYLV 254 >gi|323526503|ref|YP_004228656.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Burkholderia sp. CCGE1001] gi|323383505|gb|ADX55596.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Burkholderia sp. CCGE1001] Length = 294 Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 56/175 (32%), Positives = 87/175 (49%), Gaps = 11/175 (6%) Query: 91 PRIE-KRDVVRILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVS 147 P +E V +L+L TG+G CLA+L F VD+S ALE+A N + Sbjct: 119 PYVEDPEQVSAVLELCTGSG--CLAILAAHAFPNADIDAVDLSAPALEVAARNVADYKLD 176 Query: 148 ERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206 +R + D ++ + + +DVI+SNPPY+ + + L E R +P ++L GG DG+ Sbjct: 177 DRIALFEGDLYAPLAQRRYDVIISNPPYVNAASMQDLPAEYR-HEPEMALAGGADGMDIV 235 Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 R I L +DG+ +EIG N++ V F L ++ G+D V L Sbjct: 236 RRIIADARNWLTEDGVLVIEIG-NERQHVEAAFGGLDLVWLST---SAGDDNVFL 286 >gi|159039552|ref|YP_001538805.1| HemK family modification methylase [Salinispora arenicola CNS-205] gi|157918387|gb|ABV99814.1| modification methylase, HemK family [Salinispora arenicola CNS-205] Length = 304 Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 54/200 (27%), Positives = 89/200 (44%), Gaps = 13/200 (6%) Query: 34 QRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRI 93 QR + R E + + G F + L + F PRPETELL + + + Sbjct: 65 QRHRFDALVTRRAAREPLQYLTGSAPFRYLELAVGPGVFVPRPETELLA----GWGVEQA 120 Query: 94 EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE----- 148 + ++DL +G+GA+ LA+ +E P + V V+ S AL + N + Sbjct: 121 RREAAPLVVDLCSGSGAIALAVAQEVPAARVVAVEGSPAALSWLRRNVASRAAGGDRAVE 180 Query: 149 --RFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206 D D + + G DV++ NPPY+ + IV + EV DP ++ G+DGL+ Sbjct: 181 VVAADVTAPDLLAELLGRVDVLLCNPPYVPADIV--VPPEVGRHDPPGAVFAGVDGLAVV 238 Query: 207 RTIADGVSRHLNKDGLCSVE 226 R++ + L G +E Sbjct: 239 RSVVPRAAVLLRPGGRFGIE 258 >gi|290962666|ref|YP_003493848.1| methylase [Streptomyces scabiei 87.22] gi|260652192|emb|CBG75324.1| putative methylase [Streptomyces scabiei 87.22] Length = 258 Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 58/191 (30%), Positives = 86/191 (45%), Gaps = 6/191 (3%) Query: 54 ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113 +LGW +F +R+T+ F PR TE LV+ ALA ++P ++DL G+GAV Sbjct: 54 VLGWAEFAGLRITVEPGVFVPRRRTEFLVERALA-AVPGASV-----VVDLCCGSGAVGA 107 Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173 AL + DI A+ A+ N + L + + G D++ +N P Sbjct: 108 ALAVRLVGAELHAADIDPVAVRCARRNIAPHDGHAHEGDLFAALPDRLRGRVDILAANVP 167 Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233 Y+ + V L E RD +P ++LDGG DGL R +A L G VE Q Sbjct: 168 YVPTGEVPFLPGEARDHEPLVALDGGADGLDVLRRVAAEAPAWLAPGGCLLVETSERQAP 227 Query: 234 DVVRIFESRKL 244 + F+ L Sbjct: 228 LALDAFQRAGL 238 >gi|296225309|ref|XP_002758436.1| PREDICTED: hemK methyltransferase family member 1-like [Callithrix jacchus] Length = 338 Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 67/229 (29%), Positives = 102/229 (44%), Gaps = 12/229 (5%) Query: 44 RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPR---IEKRDVVR 100 R L+ + ILG DF + L + F PRPETE LV+ L R + Sbjct: 103 RRLQRMPVQYILGEWDFQGLSLKMMPPVFIPRPETEELVEWVLEEVAQRSHAVGSPGSPL 162 Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD---- 156 IL++G G+GA+ L+LL + P + + VD A+ + NA + +R + D Sbjct: 163 ILEVGCGSGAISLSLLSQLPQSRVIAVDKGETAISLTHENAQRLRLQDRIWIIHLDMTSE 222 Query: 157 --WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214 W G D++VSNPPY+ ++ L E+ ++ +LDGG +G+ I Sbjct: 223 GSWTHLPWGPVDLVVSNPPYVFHQDMEQLAPEIHSYEDPAALDGGEEGMDIITHILALAP 282 Query: 215 RHLNKDGLCSVEIGYNQKVDVVRIFESRK---LFLVNAFKDYGGNDRVL 260 R L G +E+ V +SR L LV +D+ G R L Sbjct: 283 RLLKDCGSIFLEVDPRHLELVSSWLQSRPELYLNLVAVRRDFCGRPRFL 331 >gi|271501315|ref|YP_003334340.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Dickeya dadantii Ech586] gi|270344870|gb|ACZ77635.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Dickeya dadantii Ech586] Length = 310 Score = 75.5 bits (184), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 49/156 (31%), Positives = 78/156 (50%), Gaps = 6/156 (3%) Query: 74 PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133 PR L++ LP + ILDL TG+G + +A + P + VDIS A Sbjct: 113 PRSPIGELINQRFVSLLPTAPRH----ILDLCTGSGCIAIACAQAFPEAEVDAVDISADA 168 Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDP 192 L + + N +G+ ++SD F + + +D+IV+NPPY++ + L E R F+P Sbjct: 169 LAVTEQNIQQHGMEYNVTPIRSDLFRELPAIHYDLIVTNPPYVDEEDMADLPQEYR-FEP 227 Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228 + L G DGL+ R I +L +DG+ E+G Sbjct: 228 ELGLAAGSDGLTLVRRIMACAPDYLAEDGVLICEVG 263 >gi|302869594|ref|YP_003838231.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Micromonospora aurantiaca ATCC 27029] gi|302572453|gb|ADL48655.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Micromonospora aurantiaca ATCC 27029] Length = 296 Score = 75.5 bits (184), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 57/200 (28%), Positives = 91/200 (45%), Gaps = 13/200 (6%) Query: 34 QRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRI 93 QR L + R + E + +LG F ++ L + F PRPETELL + + + R Sbjct: 46 QRDRLDALVGRRVTREPLQHLLGSAGFRHLELAVGPGVFVPRPETELLAE----WGIERA 101 Query: 94 EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER---- 149 + ++DL +G+GA+ LA+ +E P + V V+ S AL + NA + Sbjct: 102 REHAAPLVVDLCSGSGAIALAVAQEVPAARVVAVERSPAALAWLRRNAAGRAAAGDRPVE 161 Query: 150 ---FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206 D D + + G DV++ NPPY+ + + EV DP ++ GG DGL Sbjct: 162 VVAADVTDPDLLADLAGRVDVLLCNPPYVPRSV--AVPPEVAGHDPDEAVFGGADGLDVI 219 Query: 207 RTIADGVSRHLNKDGLCSVE 226 R + + L G +E Sbjct: 220 RPVVGRAAALLRPGGAIGIE 239 >gi|149375248|ref|ZP_01893020.1| putative DNA methylase [Marinobacter algicola DG893] gi|149360612|gb|EDM49064.1| putative DNA methylase [Marinobacter algicola DG893] Length = 294 Score = 75.5 bits (184), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 57/178 (32%), Positives = 88/178 (49%), Gaps = 10/178 (5%) Query: 54 ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113 +LG F + + PR L+ L P + + V RILDL TG+G + + Sbjct: 88 LLGEAWFMGLPFHVDERVLVPRSPLGELIQGGLQ---PWLGNKPVGRILDLCTGSGCIGI 144 Query: 114 ALLKESPFFKGVGVD---ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170 A + F+ VD IS AL++A N + V +R T+++D F +EG +DVI+S Sbjct: 145 A---AASVFEDAEVDLADISTDALDVAAVNIDYHEVGDRVSTVRADVFDGLEGRYDVILS 201 Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228 NPPY+++ + + E +P + L G DGL I + +LN GL VE+G Sbjct: 202 NPPYVDADDIADMPAEY-GHEPELGLAAGRDGLDIAHRILARAADYLNPGGLLIVEVG 258 >gi|312148044|gb|ADQ30703.1| protoporphyrinogen oxidase, putative [Borrelia burgdorferi JD1] Length = 286 Score = 75.1 bits (183), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 53/183 (28%), Positives = 94/183 (51%), Gaps = 20/183 (10%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110 IH IL ++F + +L+ PR +TE L + AL +I++ +ILDL G+G Sbjct: 64 IHYILQKKEFMGIEFSLNRHVLIPRFDTECLAEEALI----QIQQNGFKKILDLCCGSGC 119 Query: 111 VCLALLKESPFF---KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDV 167 + L++ ++ K + DIS KAL+I + N + + + + S+ ++G D+ Sbjct: 120 IGLSI----AYYIRKKVILSDISTKALQIVEKNTKKLKLEKFVEIIHSNLLKCIKGKLDI 175 Query: 168 IVSNPPYIESVIVDCLGLEVRD---FDPRISLDG-GIDGLSHYRTIADGVSRHLNKDGLC 223 I++NPPY+ LE+++ +P +L G G DGL+ R I + L+ +GL Sbjct: 176 IITNPPYLNKE-----ELEIKNKIKKEPTKALLGFGKDGLNISRKILNQAKEKLSPNGLI 230 Query: 224 SVE 226 +E Sbjct: 231 IIE 233 >gi|254252046|ref|ZP_04945364.1| Methylase [Burkholderia dolosa AUO158] gi|124894655|gb|EAY68535.1| Methylase [Burkholderia dolosa AUO158] Length = 302 Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 57/178 (32%), Positives = 86/178 (48%), Gaps = 16/178 (8%) Query: 94 EKRDVVRILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVSERFD 151 + V +L+L TG+G CLA+L S F VD+S AL++A+ N G+ +R Sbjct: 123 DPEQVGAVLELCTGSG--CLAILAASAFPNAEIDAVDLSADALQVAEINVRDYGLEDRIS 180 Query: 152 TLQSDWFSSVEGL-------FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204 + D ++ + L +DVI+SNPPY+ + + L E R +P ++L GG DG+ Sbjct: 181 LHRGDLYAPLPALRTQPGARYDVILSNPPYVNAASMAALPPEYR-HEPEMALAGGDDGMD 239 Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262 R I L+ DG+ VEIG N++ V F L G+D V L Sbjct: 240 IVRRIVAEAHNWLHDDGVLVVEIG-NEREHVEAAFGGLAL---TWLPTSAGDDAVFLI 293 >gi|194289807|ref|YP_002005714.1| n5-glutamine s-adenosyl-l-methionine-dependent methyltransferase [Cupriavidus taiwanensis LMG 19424] gi|193223642|emb|CAQ69649.1| putative Adenine-specific methyase [Cupriavidus taiwanensis LMG 19424] Length = 297 Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 54/174 (31%), Positives = 85/174 (48%), Gaps = 11/174 (6%) Query: 94 EKRDVVRILDLGTGTGAVCLALLKES--PFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151 E + +L+L TG+G CL +L P K VDIS AL +A+ N + +R Sbjct: 125 ESGSIGPVLELCTGSG--CLPILAAHVWPHAKIDAVDISPDALAVARRNVADYKMDDRIR 182 Query: 152 TLQSDWFSSVE--GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209 + D ++ + +DVI++NPPY+ + L E + +PRI+L GG DG+ R I Sbjct: 183 LYEGDLYAPLPHGATYDVILTNPPYVNEASMQALPAEYQ-AEPRIALAGGDDGMDVVRRI 241 Query: 210 ADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFC 263 G LN G+ VEIG N+ +V F ++ + G+++V L Sbjct: 242 IAGAKARLNPGGVLVVEIG-NEHANVEAAFPELEIVWLPV---SAGDEQVFLLT 291 >gi|300704248|ref|YP_003745851.1| adenine-specific methylase [Ralstonia solanacearum CFBP2957] gi|299071912|emb|CBJ43241.1| putative adenine-specific methylase [Ralstonia solanacearum CFBP2957] Length = 300 Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 68/233 (29%), Positives = 110/233 (47%), Gaps = 18/233 (7%) Query: 41 AIVRSLKHESIHRI----LGWRDF-YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEK 95 A++R ++ ++ R+ L F + VR + PR L++S L +P + Sbjct: 74 AVLRVIERRTVDRVPAAYLTHEAFMHGVRFYVDERVIVPRSFIGELLESGLDPWIPH--E 131 Query: 96 RDVVRILDLGTGTGAVCLALLK--ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153 +L+L TG+G CLA+L + P VD+S AL +A+ N +++R Sbjct: 132 DGPTDVLELCTGSG--CLAILAALQWPNATLDAVDLSPDALVVAQRNVDDFHLNDRIRLH 189 Query: 154 QSDWFSSVEG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIAD 211 + D ++ + +DVI++NPPY+ + L E R +PR++L GG DG+ R I Sbjct: 190 EGDLYAPLPPGVHYDVILTNPPYVNETSMQALPPEYR-AEPRMALAGGTDGMDIVRRILA 248 Query: 212 GVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 RHL G+ VEIG N++ +V F L G D+V L R Sbjct: 249 DAPRHLKPHGVLVVEIG-NERENVEAAFPDLDLVW---LPTSAGEDQVFLVTR 297 >gi|167972247|ref|ZP_02554524.1| methyltransferase, HemK family [Ureaplasma urealyticum serovar 5 str. ATCC 27817] gi|167974272|ref|ZP_02556549.1| methyltransferase, HemK family [Ureaplasma urealyticum serovar 11 str. ATCC 33695] gi|167988936|ref|ZP_02570607.1| methyltransferase, HemK family [Ureaplasma urealyticum serovar 7 str. ATCC 27819] gi|225551341|ref|ZP_03772287.1| methyltransferase, HemK family [Ureaplasma urealyticum serovar 8 str. ATCC 27618] gi|184209290|gb|EDU06333.1| methyltransferase, HemK family [Ureaplasma urealyticum serovar 5 str. ATCC 27817] gi|188018695|gb|EDU56735.1| methyltransferase, HemK family [Ureaplasma urealyticum serovar 7 str. ATCC 27819] gi|188998170|gb|EDU67267.1| methyltransferase, HemK family [Ureaplasma urealyticum serovar 11 str. ATCC 33695] gi|225379156|gb|EEH01521.1| methyltransferase, HemK family [Ureaplasma urealyticum serovar 8 str. ATCC 27618] Length = 290 Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 64/222 (28%), Positives = 108/222 (48%), Gaps = 11/222 (4%) Query: 46 LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLG 105 + + + RILG+ F R + + F R ETELLVD + + + K + ++D+ Sbjct: 65 INEKPLERILGYGYFCGRRFYVDENVFAFRVETELLVD--VINKIIKQSKHQIKSVIDVC 122 Query: 106 TGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN---GVSERFDTLQSDWFSSVE 162 G+G + L++ +DIS A+ +K NA + G++ ++Q +F + Sbjct: 123 CGSGVLGLSVKMNFNNLDVSLLDISLDAISNSKKNAQYHNIEGINYLHKSMQK-YFLHTK 181 Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG--GIDGLSHYRTIADGVSRHLNKD 220 FD+I+ NPPYI+S L +V D+DP +L DG+S Y I + +S NK Sbjct: 182 KRFDLIICNPPYIKSDYQ--LDKQVLDYDPLNALVDFEHKDGISFYLFIINNISLICNKK 239 Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAF-KDYGGNDRVLL 261 EIGY+QK + + + + + F DY R+L+ Sbjct: 240 FTIVFEIGYDQKTILENVLKKNEFPIFYYFINDYNNLYRILV 281 >gi|53719781|ref|YP_108767.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Burkholderia pseudomallei K96243] gi|53723897|ref|YP_103209.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Burkholderia mallei ATCC 23344] gi|121598261|ref|YP_993388.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Burkholderia mallei SAVP1] gi|124383464|ref|YP_001029176.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Burkholderia mallei NCTC 10229] gi|126448555|ref|YP_001080895.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Burkholderia mallei NCTC 10247] gi|134277102|ref|ZP_01763817.1| methyltransferase, HemK family protein [Burkholderia pseudomallei 305] gi|166999688|ref|ZP_02265523.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Burkholderia mallei PRL-20] gi|167739188|ref|ZP_02411962.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Burkholderia pseudomallei 14] gi|167816399|ref|ZP_02448079.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Burkholderia pseudomallei 91] gi|167824779|ref|ZP_02456250.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Burkholderia pseudomallei 9] gi|167894891|ref|ZP_02482293.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Burkholderia pseudomallei 7894] gi|167903279|ref|ZP_02490484.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Burkholderia pseudomallei NCTC 13177] gi|167911520|ref|ZP_02498611.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Burkholderia pseudomallei 112] gi|167919529|ref|ZP_02506620.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Burkholderia pseudomallei BCC215] gi|226198944|ref|ZP_03794507.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Burkholderia pseudomallei Pakistan 9] gi|238563761|ref|ZP_00438331.2| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Burkholderia mallei GB8 horse 4] gi|254178103|ref|ZP_04884758.1| hemK family protein [Burkholderia mallei ATCC 10399] gi|254189307|ref|ZP_04895818.1| methyltransferase, HemK family [Burkholderia pseudomallei Pasteur 52237] gi|254197379|ref|ZP_04903801.1| methyltransferase, HemK family [Burkholderia pseudomallei S13] gi|254200162|ref|ZP_04906528.1| methyltransferase, HemK family protein [Burkholderia mallei FMH] gi|254206500|ref|ZP_04912852.1| methyltransferase, HemK family protein [Burkholderia mallei JHU] gi|52210195|emb|CAH36174.1| putative DNA methylase [Burkholderia pseudomallei K96243] gi|52427320|gb|AAU47913.1| hemK family protein [Burkholderia mallei ATCC 23344] gi|121227071|gb|ABM49589.1| hemK family protein [Burkholderia mallei SAVP1] gi|124291484|gb|ABN00753.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Burkholderia mallei NCTC 10229] gi|126241425|gb|ABO04518.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Burkholderia mallei NCTC 10247] gi|134250752|gb|EBA50831.1| methyltransferase, HemK family protein [Burkholderia pseudomallei 305] gi|147749758|gb|EDK56832.1| methyltransferase, HemK family protein [Burkholderia mallei FMH] gi|147753943|gb|EDK61008.1| methyltransferase, HemK family protein [Burkholderia mallei JHU] gi|157936986|gb|EDO92656.1| methyltransferase, HemK family [Burkholderia pseudomallei Pasteur 52237] gi|160699142|gb|EDP89112.1| hemK family protein [Burkholderia mallei ATCC 10399] gi|169654120|gb|EDS86813.1| methyltransferase, HemK family [Burkholderia pseudomallei S13] gi|225929044|gb|EEH25068.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Burkholderia pseudomallei Pakistan 9] gi|238520025|gb|EEP83489.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Burkholderia mallei GB8 horse 4] gi|243064338|gb|EES46524.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Burkholderia mallei PRL-20] Length = 307 Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 55/165 (33%), Positives = 83/165 (50%), Gaps = 15/165 (9%) Query: 91 PRIEKRDVV-RILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVS 147 P +E ++V +L+L TG+G CLA+L F VD+S AL +AK N G+ Sbjct: 122 PYVEDPELVGSVLELCTGSG--CLAILAALAFPNASVDAVDLSADALAVAKINRDNYGLD 179 Query: 148 ERFDTLQSDWFSSVEGL--------FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199 ER D ++ + +DVI++NPPY+ + + L E R +P ++L GG Sbjct: 180 ERIALYHGDLYAPLPQFKWIDPAQRYDVIIANPPYVNAGSMAELPAEYR-HEPEMALAGG 238 Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 DG+ R I R L DG+ VEIG N++ +V F +L Sbjct: 239 ADGMDIVRRIIGEARRWLQDDGVLVVEIG-NERANVEAAFGGLEL 282 >gi|270157806|ref|ZP_06186463.1| adenine-specific methylase [Legionella longbeachae D-4968] gi|289163925|ref|YP_003454063.1| N5-glutamine methyltransferase [Legionella longbeachae NSW150] gi|269989831|gb|EEZ96085.1| adenine-specific methylase [Legionella longbeachae D-4968] gi|288857098|emb|CBJ10913.1| N5-glutamine methyltransferase [Legionella longbeachae NSW150] Length = 305 Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 48/139 (34%), Positives = 75/139 (53%), Gaps = 2/139 (1%) Query: 91 PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150 P I+ V RILDL TG+G + +A P DIS +AL +A N GV ++ Sbjct: 126 PWIDADKVHRILDLCTGSGCIAIACCYAFPEALVDATDISSEALAVAAINREQLGVEDQL 185 Query: 151 DTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209 ++SD F+ V + +D+IV NPPY+ + L E R +P ++L+ G +GL+ +I Sbjct: 186 TLIESDCFTKVPQVHYDLIVCNPPYVGKEEMQTLPDEFRH-EPVLALETGNNGLTIVESI 244 Query: 210 ADGVSRHLNKDGLCSVEIG 228 +L++ GL VE+G Sbjct: 245 LQNAHAYLSEHGLLIVEVG 263 >gi|170696504|ref|ZP_02887629.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Burkholderia graminis C4D1M] gi|170138607|gb|EDT06810.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Burkholderia graminis C4D1M] Length = 294 Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 56/175 (32%), Positives = 87/175 (49%), Gaps = 11/175 (6%) Query: 91 PRIE-KRDVVRILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVS 147 P +E V +L+L TG+G CLA+L F VD+S ALE+A N + Sbjct: 119 PYVEDPEQVSAVLELCTGSG--CLAILAAHAFPNADIDAVDLSAPALEVAARNVADYKLD 176 Query: 148 ERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206 +R + D ++ + E +DVI+SNPPY+ + + L E + +P ++L GG DG+ Sbjct: 177 DRIALFEGDLYAPLAERRYDVIISNPPYVNAASMRELPAEYK-HEPEMALAGGADGMDIV 235 Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 R I L +DG+ +EIG N++ V F L ++ G+D V L Sbjct: 236 RRIIADARNWLTEDGVLVIEIG-NERQHVEAAFGGLNLVWLST---SAGDDNVFL 286 >gi|326559238|gb|EGE09669.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Moraxella catarrhalis 46P47B1] gi|326559877|gb|EGE10277.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Moraxella catarrhalis 7169] gi|326560774|gb|EGE11141.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Moraxella catarrhalis 103P14B1] gi|326563515|gb|EGE13774.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Moraxella catarrhalis 12P80B1] gi|326569637|gb|EGE19689.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Moraxella catarrhalis BC1] gi|326570118|gb|EGE20163.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Moraxella catarrhalis BC8] gi|326570856|gb|EGE20880.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Moraxella catarrhalis BC7] gi|326574405|gb|EGE24347.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Moraxella catarrhalis 101P30B1] gi|326576001|gb|EGE25924.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Moraxella catarrhalis CO72] gi|326576413|gb|EGE26322.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Moraxella catarrhalis O35E] Length = 370 Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 45/131 (34%), Positives = 72/131 (54%), Gaps = 3/131 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 RILDL TG+G + +AL K P DI ALE+A +N + ++ + + L+S+ F+ Sbjct: 187 RILDLCTGSGCIAIALAKAFPDANIDATDIDKDALEVAWTNVEHHELAHQVNLLESNLFA 246 Query: 160 SV--EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217 + E +++IV+NPPY+++ ++ L E +P +L G DGL I +L Sbjct: 247 KLPAENQYELIVTNPPYVDAAVMAELPPEFL-HEPEHALAAGQDGLDLVHQILYHAPDYL 305 Query: 218 NKDGLCSVEIG 228 KDGL E+G Sbjct: 306 TKDGLLVCEVG 316 >gi|76809485|ref|YP_333989.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Burkholderia pseudomallei 1710b] gi|167720185|ref|ZP_02403421.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Burkholderia pseudomallei DM98] gi|217421762|ref|ZP_03453266.1| ribosomal protein L3 N-methyltransferase [Burkholderia pseudomallei 576] gi|254179306|ref|ZP_04885905.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Burkholderia pseudomallei 1655] gi|254259890|ref|ZP_04950944.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Burkholderia pseudomallei 1710a] gi|76578938|gb|ABA48413.1| hemK family protein [Burkholderia pseudomallei 1710b] gi|184209846|gb|EDU06889.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Burkholderia pseudomallei 1655] gi|217395504|gb|EEC35522.1| ribosomal protein L3 N-methyltransferase [Burkholderia pseudomallei 576] gi|254218579|gb|EET07963.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Burkholderia pseudomallei 1710a] Length = 307 Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 55/165 (33%), Positives = 83/165 (50%), Gaps = 15/165 (9%) Query: 91 PRIEKRDVV-RILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVS 147 P +E ++V +L+L TG+G CLA+L F VD+S AL +AK N G+ Sbjct: 122 PYVEDPELVGSVLELCTGSG--CLAILAALAFPNASVDAVDLSADALAVAKINRDNYGLD 179 Query: 148 ERFDTLQSDWFSSVEGL--------FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199 ER D ++ + +DVI++NPPY+ + + L E R +P ++L GG Sbjct: 180 ERIALYHGDLYAPLPQFKWIDPARRYDVIIANPPYVNAGSMAELPAEYR-HEPEMALAGG 238 Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 DG+ R I R L DG+ VEIG N++ +V F +L Sbjct: 239 ADGMDIVRRIIGEARRWLQDDGVLVVEIG-NERANVEAAFGGLEL 282 >gi|90579978|ref|ZP_01235786.1| putative adenine-specific methylase [Vibrio angustum S14] gi|90438863|gb|EAS64046.1| putative adenine-specific methylase [Vibrio angustum S14] Length = 310 Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 47/135 (34%), Positives = 71/135 (52%), Gaps = 2/135 (1%) Query: 95 KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154 ++ RI+DL TG+G + +A P + VDIS +AL +A+ N +G+ ++ L+ Sbjct: 130 NQEPTRIMDLCTGSGCIGIACAHMFPEAEVDIVDISPEALAVAEQNIADHGLEQQVIPLR 189 Query: 155 SDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213 SD V + +D IVSNPPY++ +D L E R +P + L G DGL R I Sbjct: 190 SDLLRDVPKDKYDFIVSNPPYVDQEDMDSLPDEFR-HEPELGLAAGFDGLDLVRRILANA 248 Query: 214 SRHLNKDGLCSVEIG 228 +L DG E+G Sbjct: 249 PDYLKDDGFLICEVG 263 >gi|296113394|ref|YP_003627332.1| ribosomal large subunit L3 glutamine methyltransfere [Moraxella catarrhalis RH4] gi|295921088|gb|ADG61439.1| ribosomal large subunit L3 glutamine methyltransfere [Moraxella catarrhalis RH4] Length = 370 Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 45/131 (34%), Positives = 72/131 (54%), Gaps = 3/131 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 RILDL TG+G + +AL K P DI ALE+A +N + ++ + + L+S+ F+ Sbjct: 187 RILDLCTGSGCIAIALAKAFPDANIDATDIDKDALEVAWTNVEHHELAHQVNLLESNLFA 246 Query: 160 SV--EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217 + E +++IV+NPPY+++ ++ L E +P +L G DGL I +L Sbjct: 247 KLPAENQYELIVTNPPYVDAAVMAELPPEFL-HEPEHALAAGQDGLDLVHQILYHAPDYL 305 Query: 218 NKDGLCSVEIG 228 KDGL E+G Sbjct: 306 TKDGLLVCEVG 316 >gi|225017548|ref|ZP_03706740.1| hypothetical protein CLOSTMETH_01475 [Clostridium methylpentosum DSM 5476] gi|224949698|gb|EEG30907.1| hypothetical protein CLOSTMETH_01475 [Clostridium methylpentosum DSM 5476] Length = 287 Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 65/214 (30%), Positives = 98/214 (45%), Gaps = 12/214 (5%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110 + +LG +FY + + PRP+TE L D A+ +I +R V + DL G+G Sbjct: 70 LQYLLGSWEFYGLEFEVGEGVLIPRPDTERLCDIAIE----QIGERPAV-VADLCAGSGC 124 Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS-VEGLF---D 166 V A+ + V++S AL + N N + + ++ D S GL D Sbjct: 125 VAAAVQCACAQAQMFAVELSELALPYLRRNLARN--APQVTVIEGDVLSGDTPGLLPQLD 182 Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE 226 I+SNPPY+ + ++ L EVR +P ++L G DGL YR I L GL + E Sbjct: 183 AILSNPPYLTAEDMEHLQREVR-HEPALALYGEEDGLGFYRGITQLWKHRLRPGGLLAYE 241 Query: 227 IGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 IG NQ V +I + +D G RV+ Sbjct: 242 IGINQHTAVAKILRENGFSRIQYAEDLHGVIRVV 275 >gi|239815694|ref|YP_002944604.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Variovorax paradoxus S110] gi|239802271|gb|ACS19338.1| modification methylase, HemK family [Variovorax paradoxus S110] Length = 293 Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 47/156 (30%), Positives = 83/156 (53%), Gaps = 7/156 (4%) Query: 78 TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137 EL+ D ++ + L R+LDL TG G++ + P D+S +ALE+A Sbjct: 106 AELIADGSIDYWL----GEHTQRVLDLCTGNGSLAVLAAMTYPDITVDAADLSAEALEVA 161 Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197 N + + R ++SD +S+ G +D+++ NPPY+ S + L E R +P ++L Sbjct: 162 AINVTRHQLDARIRLVESDGLASLPGPYDLVLCNPPYVNSASMAALPAEYR-AEPELALA 220 Query: 198 GGIDGLSHYRTI-ADGVSRHLNKDGLCSVEIGYNQK 232 GG DG+ R + AD SR ++++ + +EIG ++ Sbjct: 221 GGADGMDFVRQLFADAPSR-MSEEAVLVLEIGNERE 255 >gi|163750169|ref|ZP_02157411.1| hemK family protein [Shewanella benthica KT99] gi|161330025|gb|EDQ01009.1| hemK family protein [Shewanella benthica KT99] Length = 313 Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 56/176 (31%), Positives = 93/176 (52%), Gaps = 7/176 (3%) Query: 91 PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150 P + + V R+LDL TG+ + +A E + +DIS AL++A+ N + GV +R Sbjct: 127 PWLYHKQVNRVLDLCTGSACIAIACAYEFDEAEVDALDISADALDVAQINIESLGVLDRV 186 Query: 151 DTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208 ++SD FS++ +D+IVSNPPY+++ + + E + +P I L G DGL + Sbjct: 187 FPIESDIFSAIPKGPHYDLIVSNPPYVDAEDIGDMPDEYQ-HEPAIGLASGRDGLDLTKR 245 Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 I + ++ DGL VE+G N V ++ F + V F++ G D V + R Sbjct: 246 ILANAADYMTTDGLLVVEVG-NSMVHLLEQFPNVPFTWVT-FEN--GGDGVFVLTR 297 >gi|313672262|ref|YP_004050373.1| protein-(glutamine-n5) methyltransferase, release factor-specific [Calditerrivibrio nitroreducens DSM 19672] gi|312939018|gb|ADR18210.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Calditerrivibrio nitroreducens DSM 19672] Length = 275 Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 58/207 (28%), Positives = 99/207 (47%), Gaps = 16/207 (7%) Query: 58 RDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117 R+F+ + PR ETE+LV+ AL + + ++LD+ TG+G + L Sbjct: 75 REFFGYEFYVDERVLIPRHETEILVEEALKIDIKK------PKVLDICTGSGVILATYLL 128 Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPP 173 + G+GVDIS ALE+A N + +R + D S ++ + FD+I+ NPP Sbjct: 129 KKGDATGLGVDISLPALEVAMINLRKYNLLDRACLVCLDAVSDLDSVKISEFDIILCNPP 188 Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233 YI + L V ++P +L DG Y+ + + + +D + EIG Sbjct: 189 YISK--SEKLSNSVL-YEPHNALFAEDDGYYFYKKLLRILYKSCKEDTIIFFEIGDGMSE 245 Query: 234 DVVRIFESRKLFLVNAFKDYGGNDRVL 260 ++ +IF +++ + +DY G RVL Sbjct: 246 ELKKIFSGKEISFI---EDYAGKKRVL 269 >gi|300311474|ref|YP_003775566.1| adenine-specific methylase/methyltransferase [Herbaspirillum seropedicae SmR1] gi|300074259|gb|ADJ63658.1| adenine-specific methylase/methyltransferase protein [Herbaspirillum seropedicae SmR1] Length = 296 Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 54/173 (31%), Positives = 88/173 (50%), Gaps = 7/173 (4%) Query: 91 PRIEKRDVVR-ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 P I+ + + LDL TG+G + + L P + VDIS AL +A+ N + ER Sbjct: 120 PWIQDPEAIENALDLCTGSGCLPILLADAFPNAQIDAVDISADALAVARKNVDEYQLQER 179 Query: 150 FDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208 + ++SD ++ + +D+I+SNPPY+ S + L E +P+++L GG DG+ R Sbjct: 180 INLVESDLYTQLPLRKYDLIISNPPYVNSGSMAKLPQEYLR-EPQLALAGGEDGMDLVRK 238 Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 I G + L +G+ VEIG N++ F +L + G+D V L Sbjct: 239 IVAGAAERLTPEGVLVVEIG-NERAFAEAAFPELELTWLTT---SAGDDMVFL 287 >gi|332307145|ref|YP_004434996.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Glaciecola agarilytica 4H-3-7+YE-5] gi|332174474|gb|AEE23728.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Glaciecola agarilytica 4H-3-7+YE-5] Length = 309 Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 55/161 (34%), Positives = 85/161 (52%), Gaps = 10/161 (6%) Query: 74 PR-PETELLVDSALAF-SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131 PR P EL+ D A+ ++P ILDL TG G + +AL VDIS Sbjct: 118 PRSPFAELIEDKFAAWVTVPP------THILDLCTGGGCIAIALAYAFEDATVDAVDIST 171 Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDF 190 +ALE+A+ N + +SER +QSD +++G +D+I+SNPPY+++ + L E Sbjct: 172 EALEVAEMNINEHQLSERVYPIQSDLLDALQGQKYDLIISNPPYVDAEDMADLPDEFH-H 230 Query: 191 DPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231 +P ++L G DGL + + HL +G VE+G +Q Sbjct: 231 EPELALAAGDDGLDLVHKMLRQAAAHLTDEGWLFVEVGNSQ 271 >gi|17546107|ref|NP_519509.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Ralstonia solanacearum GMI1000] gi|17428403|emb|CAD15090.1| probable methylase/methyltransferase protein [Ralstonia solanacearum GMI1000] Length = 304 Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 63/209 (30%), Positives = 98/209 (46%), Gaps = 13/209 (6%) Query: 60 FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK-- 117 + +R + PR L++ LA LP + +L+L TG+G CLA+L Sbjct: 102 MHGMRFYVDERVIVPRSFIGELLEEGLAPWLPH--EDGPTDVLELCTGSG--CLAILAAL 157 Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYI 175 + P VD+S AL +A+ N G++ + D ++ + +DVI++NPPY+ Sbjct: 158 QWPNATLDAVDLSPDALVVAQRNVDDYGLNGCIRLHEGDLYAPLPPGVHYDVILTNPPYV 217 Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235 + L E R +PR++L GG DG+ R I RHL G+ VEIG N++ +V Sbjct: 218 NETSMQALPPEYR-AEPRMALAGGTDGMDIVRRILADAPRHLKPHGVLVVEIG-NERENV 275 Query: 236 VRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 F L G+D+V L R Sbjct: 276 EAAFPDLDLVW---LPTSAGDDQVFLVTR 301 >gi|156555049|ref|XP_001603796.1| PREDICTED: similar to protein-(glutamine-N5) methyl transferase, putative [Nasonia vitripennis] Length = 343 Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 71/252 (28%), Positives = 113/252 (44%), Gaps = 28/252 (11%) Query: 30 LDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFS 89 LDD Q L R L + DF + +L LS+ F P +TE+LVD L Sbjct: 93 LDDMQLEKLKLLCNRRLSKMPLEYCTEESDFRDTKLKLSAPIFIPERQTEILVDLLLKHV 152 Query: 90 LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 K + +L++G G GA+ L+LL+ S V +D + A ++ NA G+ + Sbjct: 153 DRSCSK--ICHVLEIGCGAGAISLSLLR-SCKCNIVAIDTNMIACQLTLHNAKNLGLEDC 209 Query: 150 FD----TLQSDW-------------FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDP 192 TL+S+ F E FD IVSNPP + + + E D+ Sbjct: 210 LTILHATLESNGEIVCTSNLSNDRVFDLQEETFDFIVSNPPCVPTSELPKWQKEYEDYQA 269 Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLV----N 248 R +GG DGL R + S+ L KDG+ +E+ Q+ + +R ++ L+ + Sbjct: 270 R---NGGKDGLRVIRPLLMYASKRLKKDGILLMEV-LPQQTEQIRSLTEKQYPLILKFDH 325 Query: 249 AFKDYGGNDRVL 260 +KD ++RV+ Sbjct: 326 VYKDLSNDERVV 337 >gi|323356869|ref|YP_004223265.1| methylase of polypeptide chain release factors [Microbacterium testaceum StLB037] gi|323273240|dbj|BAJ73385.1| methylase of polypeptide chain release factors [Microbacterium testaceum StLB037] Length = 297 Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 61/184 (33%), Positives = 88/184 (47%), Gaps = 19/184 (10%) Query: 44 RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103 R E + + G F ++ L + F PRPETE++ + LA +D Sbjct: 77 RRCAREPLQHLTGVAPFRSLELAVGPGVFVPRPETEMV--AQLAIDALGAAAAPAPIAVD 134 Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG---VSERFDTLQSDWFSS 160 LGTG+GA+ LA+ E P + + S A K N G V+ F L +D F Sbjct: 135 LGTGSGAIALAMATEVPHARVFAAENSVDAFIWTKENVARVGATNVTLAFVDL-ADAFPE 193 Query: 161 VEGLFDVIVSNPPYI--ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 ++G V+ SNPPY+ +++ D EVR +DP +L GG DGL D V RHL+ Sbjct: 194 LDGTVSVVASNPPYVPDDAIPRDP---EVRLYDPPAALYGGPDGL-------DAV-RHLS 242 Query: 219 KDGL 222 + GL Sbjct: 243 RVGL 246 >gi|167581464|ref|ZP_02374338.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Burkholderia thailandensis TXDOH] Length = 307 Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 59/183 (32%), Positives = 89/183 (48%), Gaps = 18/183 (9%) Query: 91 PRIEKRDVV-RILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVS 147 P +E ++V +L+L TG+G CLA+L F VD+S AL +AK N G+ Sbjct: 122 PYVEDPELVGSVLELCTGSG--CLAILAALAFPNASVDAVDLSADALAVAKINRDDYGLD 179 Query: 148 ERFDTLQSDWFSSVEGL--------FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199 ER D ++ + +DVI++NPPY+ + + L E R +P ++L GG Sbjct: 180 ERIALHHGDLYAPLPQFKWIDSAQRYDVIITNPPYVNAESMAELPAEYR-HEPEMALAGG 238 Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRV 259 DG+ R I R L DG+ VEIG N++ +V F +L + G+D V Sbjct: 239 ADGMDIVRRIIGEARRWLKDDGVLVVEIG-NERANVEAAFGGLELVWL---PTSAGDDSV 294 Query: 260 LLF 262 L Sbjct: 295 FLI 297 >gi|144227482|gb|AAZ44227.2| protoporphirogen oxidase [Mycoplasma hyopneumoniae J] gi|144575293|gb|AAZ53514.2| protoporphirogen oxidase [Mycoplasma hyopneumoniae 7448] Length = 238 Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 67/214 (31%), Positives = 110/214 (51%), Gaps = 24/214 (11%) Query: 28 SVLDDRQRFFLTNAI--VRSLKHE---SIHRILGWRDFYNVRLTLSSDTFEPRPETELLV 82 +L ++QR+ L I + +LK E I +I+G+ + V++ L F PR ET+ Sbjct: 9 ELLKEKQRYNLPLKISKLENLKLELDYPIQKIIGFIEMEGVKIFLDQKVFIPRYETQ--- 65 Query: 83 DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV---DISCKALEIAKS 139 + I+K D+V LDL +G+G + LAL K F + DIS +A+ AK Sbjct: 66 -ELILKIKKVIKKGDLV--LDLCSGSGFIGLALAK----FINAKITLADISDEAILQAKL 118 Query: 140 NAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG 198 NA N + + ++SD F+++ E F++IV+NPPY++ + L V +F+P+ +L Sbjct: 119 NAKYNNL--ELNIIKSDLFANIPEQKFNIIVANPPYLKE---EKLANSVLNFEPKTALFA 173 Query: 199 GIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232 + S Y I + + L DG EI YN + Sbjct: 174 WPEPFSFYEKILEKIDNFLADDGWIFFEIDYNSQ 207 >gi|116329264|ref|YP_798984.1| methylase of polypeptide chain release factors [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116122008|gb|ABJ80051.1| Methylase of polypeptide chain release factors [Leptospira borgpetersenii serovar Hardjo-bovis L550] Length = 286 Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 61/195 (31%), Positives = 96/195 (49%), Gaps = 8/195 (4%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L + L ++ V+ + +L + ++ IV K++ I G + FYN Sbjct: 29 DAEILLADLLNLQRVKLYVNFERLLTETEKNAYRERIVDRSKNKPTAYITGQKAFYNSVF 88 Query: 66 TLSSDTFEPRPETELLVDSALA-FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 ++ PRPETE LV+ L F E+ +LDL TG+G + ++L + Sbjct: 89 FVNEKVLIPRPETEELVEKILLDFKGNNSEQ----NVLDLCTGSGCIGISLKSARKDWNI 144 Query: 125 VGVDISCKALEIAKSNAVT-NGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVD 181 DIS ALEIAK NA+ G L+S+ F S+ E FD+IV+NPPYI Sbjct: 145 TLSDISKDALEIAKKNAIQIIGEGNNIQFLESNLFLSIPKESEFDLIVTNPPYIPISDKT 204 Query: 182 CLGLEVRDFDPRISL 196 + +V D++P ++L Sbjct: 205 EMMKDVVDYEPHLAL 219 >gi|54020409|ref|YP_115755.1| protoporphirogen oxidase [Mycoplasma hyopneumoniae 232] gi|53987582|gb|AAV27783.1| protoporphyrinogen oxidase homolog [Mycoplasma hyopneumoniae 232] Length = 238 Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 67/214 (31%), Positives = 110/214 (51%), Gaps = 24/214 (11%) Query: 28 SVLDDRQRFFLTNAI--VRSLKHE---SIHRILGWRDFYNVRLTLSSDTFEPRPETELLV 82 +L ++QR+ L I + +LK E I +I+G+ + V++ L F PR ET+ Sbjct: 9 ELLKEKQRYNLPLKISKLENLKLELDYPIQKIIGFIEMEGVKIFLDQKVFIPRYETQ--- 65 Query: 83 DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV---DISCKALEIAKS 139 + I+K D+V LDL +G+G + LAL K F + DIS +A+ AK Sbjct: 66 -ELILKIKKVIKKGDLV--LDLCSGSGFIGLALAK----FINAKITLADISDEAILQAKL 118 Query: 140 NAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG 198 NA N + + ++SD F+++ E F++IV+NPPY++ + L V +F+P+ +L Sbjct: 119 NAKYNNL--ELNIIKSDLFANIPEQKFNIIVANPPYLKE---EKLANSVLNFEPKTALFA 173 Query: 199 GIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232 + S Y I + + L DG EI YN + Sbjct: 174 WPEPFSFYEKILEKIGNFLADDGWIFFEIDYNSQ 207 >gi|89073464|ref|ZP_01159987.1| putative adenine-specific methylase [Photobacterium sp. SKA34] gi|89050728|gb|EAR56209.1| putative adenine-specific methylase [Photobacterium sp. SKA34] Length = 310 Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 47/134 (35%), Positives = 71/134 (52%), Gaps = 2/134 (1%) Query: 96 RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155 ++ RI+DL TG+G + +A P + VDIS +AL +A+ N +G+ ++ L+S Sbjct: 131 QEPTRIMDLCTGSGCIGIACAHMFPEAEVDIVDISPEALAVAEQNIADHGLEQQVIPLRS 190 Query: 156 DWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214 D V + +D IVSNPPY++ +D L E R +P + L G DGL R I Sbjct: 191 DLLRDVPKDKYDFIVSNPPYVDQEDMDSLPDEFR-HEPELGLAAGFDGLDLVRRILANAP 249 Query: 215 RHLNKDGLCSVEIG 228 +L DG E+G Sbjct: 250 DYLKDDGFLICEVG 263 >gi|83721211|ref|YP_442537.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Burkholderia thailandensis E264] gi|167619573|ref|ZP_02388204.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Burkholderia thailandensis Bt4] gi|257138746|ref|ZP_05587008.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Burkholderia thailandensis E264] gi|83655036|gb|ABC39099.1| hemK family protein [Burkholderia thailandensis E264] Length = 307 Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 59/183 (32%), Positives = 89/183 (48%), Gaps = 18/183 (9%) Query: 91 PRIEKRDVV-RILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVS 147 P +E ++V +L+L TG+G CLA+L F VD+S AL +AK N G+ Sbjct: 122 PYVEDPELVGSVLELCTGSG--CLAILAALAFPNASVDAVDLSADALAVAKINRDDYGLD 179 Query: 148 ERFDTLQSDWFSSVEGL--------FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199 ER D ++ + +DVI++NPPY+ + + L E R +P ++L GG Sbjct: 180 ERIALHHGDLYAPLPQFKWIDSAQRYDVIITNPPYVNAESMAELPAEYR-HEPEMALAGG 238 Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRV 259 DG+ R I R L DG+ VEIG N++ +V F +L + G+D V Sbjct: 239 ADGMDIVRRIIGEARRWLKDDGVLVVEIG-NERANVEAAFGGLELVWL---PTSAGDDSV 294 Query: 260 LLF 262 L Sbjct: 295 FLI 297 >gi|304407780|ref|ZP_07389431.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Paenibacillus curdlanolyticus YK9] gi|304343263|gb|EFM09106.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Paenibacillus curdlanolyticus YK9] Length = 377 Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 39/95 (41%), Positives = 56/95 (58%), Gaps = 1/95 (1%) Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224 DV+VSNPPYI + + L EVRD++PR++LDGG+DGL YR +A+ + R + + Sbjct: 270 IDVLVSNPPYIPAGDLPDLQTEVRDYEPRLALDGGMDGLDPYRRMAEQLLRLAELPRIVA 329 Query: 225 VEIGYNQKVDVVRIFESRKLF-LVNAFKDYGGNDR 258 E+G Q DV + S + + DYGG DR Sbjct: 330 FELGMGQAEDVAELLRSIGYWDHIRIITDYGGIDR 364 Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 41/158 (25%), Positives = 72/158 (45%), Gaps = 11/158 (6%) Query: 10 FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69 + V G +++ D + + + R E + +LG + FY +++ Sbjct: 46 LIGHVLGFGKAELLRDWREPMPEEAFARWAKLVARKAAGEPVQYLLGEQWFYGRPFAVTA 105 Query: 70 DTFEPRPETELLVDSALAFS---LPRIEKRDV--------VRILDLGTGTGAVCLALLKE 118 PRPETELLV++ LA + PR E + +LD+GTG+GA+ + L E Sbjct: 106 AVLIPRPETELLVEAVLAEADALWPRGEAAAAGQEARVRELTVLDVGTGSGAIAVTLAAE 165 Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 ++ D+S AL++A NA + + R ++ D Sbjct: 166 RSDWRVYASDLSPDALQVALGNAWRHAGAGRIAFVEGD 203 >gi|190150270|ref|YP_001968795.1| adenine-specific methylase [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|307263609|ref|ZP_07545223.1| Uncharacterized adenine-specific methylase [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|189915401|gb|ACE61653.1| hypothetical adenine-specific methylase [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|306871072|gb|EFN02802.1| Uncharacterized adenine-specific methylase [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 314 Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 45/143 (31%), Positives = 79/143 (55%), Gaps = 3/143 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 RILD+ TG+G + +A + P + VD+S AL++A+ N + V+ R + SD F+ Sbjct: 143 RILDMCTGSGCIAIACAERFPHAEVDAVDLSLDALDVAQINIERHQVAHRVFPISSDLFT 202 Query: 160 SV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 + + +D+IV+NPPY++ +D + E +P ++L G+DGL + I +L Sbjct: 203 DIPQDKYDLIVTNPPYVDQEDLDDMPQEFH-HEPELALGSGVDGLDITKRILAEAPNYLA 261 Query: 219 KDGLCSVEIGYNQKVDVVRIFES 241 +G+ E+G N V ++ F S Sbjct: 262 DNGVLVCEVG-NSMVHLIEQFPS 283 >gi|32266847|ref|NP_860879.1| DNA methylase HemK [Helicobacter hepaticus ATCC 51449] gi|32262899|gb|AAP77945.1| possible DNA methylase HemK [Helicobacter hepaticus ATCC 51449] Length = 279 Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 66/225 (29%), Positives = 98/225 (43%), Gaps = 13/225 (5%) Query: 34 QRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRI 93 QRF+ I K + I I FY + PRPETE+L+D A I Sbjct: 60 QRFY--TLINERAKGKPIEYITRQASFYERSFYVDERVLIPRPETEILIDKANEI----I 113 Query: 94 EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153 + V I ++G G+G + L P DIS +ALE++K N T + TL Sbjct: 114 KGEKVNFIAEVGVGSGIITTTLAIMHPQCYFFATDISEQALEVSKLNIATYAPNANI-TL 172 Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213 Q +I+SNPPYI+ L ++P+I+L GG DGL +++ + Sbjct: 173 QCCSLLPAHINPQLIISNPPYIKDDYPISAPLH---YEPKIALFGGKDGLGILKSLINEC 229 Query: 214 SRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258 + + EIGY+QK + I + + +KD G DR Sbjct: 230 A---TRKVWLLCEIGYDQKDALEHILLQSRAKNITFYKDLSGWDR 271 >gi|297197619|ref|ZP_06915016.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptomyces sviceus ATCC 29083] gi|297146802|gb|EFH28353.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptomyces sviceus ATCC 29083] Length = 263 Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 61/202 (30%), Positives = 91/202 (45%), Gaps = 6/202 (2%) Query: 38 LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97 L + + R + + ++GW +F +R+T+S F PR TE LVD ALA + Sbjct: 43 LADMVDRRVVGHPLELVVGWAEFRGLRVTVSPGVFVPRRRTEFLVDQALALA------PG 96 Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 ++DL G+GAV AL + DI A++ A+ N G L Sbjct: 97 ASVVVDLCCGSGAVGAALAAALGPVELHSADIDPAAVDCARRNTADAGGQVHTGDLFEAL 156 Query: 158 FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217 + + G D++ +N PY+ + V L E RD +P ++LDGG DGL R +A + L Sbjct: 157 PAGLRGRVDILAANVPYVPTEEVALLPTEARDHEPLVALDGGTDGLDVLRRVAAEAPQWL 216 Query: 218 NKDGLCSVEIGYNQKVDVVRIF 239 G VE Q V F Sbjct: 217 APGGRLLVETSERQAPAAVDAF 238 >gi|241765979|ref|ZP_04763903.1| modification methylase, HemK family [Acidovorax delafieldii 2AN] gi|241364048|gb|EER59288.1| modification methylase, HemK family [Acidovorax delafieldii 2AN] Length = 309 Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 48/165 (29%), Positives = 84/165 (50%), Gaps = 5/165 (3%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+LDL TG G++ + P + G DIS ALE+A+ N +G+ R SD + Sbjct: 141 RVLDLCTGNGSLAVLAAMAWPEVEVTGADISPDALEVARINVDRHGLQARITLQLSDGLA 200 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 + G +D+I+ NPPY+ + + L E +P ++L GG DG+ R + +++ Sbjct: 201 QLPGPWDLIICNPPYVNADSMSRLPAEYL-AEPALALAGGTDGMDFVRRLLQDAPSRMSE 259 Query: 220 DGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 + + +EIG N++ F ++ V+ G+D+VL+ R Sbjct: 260 NAVLVLEIG-NERPYFEAAFGQLPVYWVDT---SAGDDQVLVVTR 300 >gi|50085164|ref|YP_046674.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Acinetobacter sp. ADP1] gi|49531140|emb|CAG68852.1| putative adenine-specific methylase [Acinetobacter sp. ADP1] Length = 336 Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 45/131 (34%), Positives = 73/131 (55%), Gaps = 3/131 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 RILD+ TG+G + +AL P + DIS ALE+A N + + L+SD F+ Sbjct: 159 RILDMCTGSGCIAVALAYAYPDAEVDATDISKDALEVAALNVEHHNKQYQIALLESDLFT 218 Query: 160 SV--EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217 + E +D+IVSNPPY+++ + L E +P ++L G DGL R + + +L Sbjct: 219 KIPAENQYDLIVSNPPYVDAEDMADLPEEFL-HEPELALAAGQDGLDLVRKMLAQAADYL 277 Query: 218 NKDGLCSVEIG 228 +++GL +E+G Sbjct: 278 SENGLIVIEVG 288 >gi|307261431|ref|ZP_07543104.1| Uncharacterized adenine-specific methylase [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|306868888|gb|EFN00692.1| Uncharacterized adenine-specific methylase [Actinobacillus pleuropneumoniae serovar 12 str. 1096] Length = 314 Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 45/143 (31%), Positives = 79/143 (55%), Gaps = 3/143 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 RILD+ TG+G + +A + P + VD+S AL++A+ N + V+ R + SD F+ Sbjct: 143 RILDMCTGSGCIAIACAERFPHAEVDAVDLSLDALDVAQINIERHQVAHRVFPISSDLFT 202 Query: 160 SV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 + + +D+IV+NPPY++ +D + E +P ++L G+DGL + I +L Sbjct: 203 DIPQDKYDLIVTNPPYVDQEDLDDMPQEFH-HEPELALGSGVDGLDITKRILAEAPNYLA 261 Query: 219 KDGLCSVEIGYNQKVDVVRIFES 241 +G+ E+G N V ++ F S Sbjct: 262 DNGVLVCEVG-NSMVHLIEQFPS 283 >gi|307131869|ref|YP_003883885.1| ribosomal protein L3 N5-glutamine methyltransferase [Dickeya dadantii 3937] gi|306529398|gb|ADM99328.1| ribosomal protein L3 N5-glutamine methyltransferase [Dickeya dadantii 3937] Length = 310 Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 49/156 (31%), Positives = 79/156 (50%), Gaps = 6/156 (3%) Query: 74 PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133 PR L+++ A LP + ILDL TG+G + +A + P + VDIS +A Sbjct: 113 PRSPIGELINNRFASLLPNAPRH----ILDLCTGSGCIAIACAQAFPEAEVDAVDISAEA 168 Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDP 192 L + + N +G+ ++SD F + + +D+IV+NPPY++ + L E R F+P Sbjct: 169 LAVTEQNIQQHGMEYNVTPIRSDLFRDLPAIQYDLIVTNPPYVDEEDMADLPQEYR-FEP 227 Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228 + L G DGL R I L ++G+ E+G Sbjct: 228 ELGLAAGSDGLKLVRRILACAPDFLTEEGVLICEVG 263 >gi|315633950|ref|ZP_07889239.1| protein-(glutamine-N5) methyltransferase [Aggregatibacter segnis ATCC 33393] gi|315477200|gb|EFU67943.1| protein-(glutamine-N5) methyltransferase [Aggregatibacter segnis ATCC 33393] Length = 316 Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 57/190 (30%), Positives = 93/190 (48%), Gaps = 11/190 (5%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110 IHR W F + + PR L++ A L R+ RILD+ TG+G Sbjct: 104 IHR--AW--FCGLEFYVDERVIVPRSPISALIEQGFAGLL----TREPQRILDMCTGSGC 155 Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS-VEGLFDVIV 169 + +A + P VD+S AL +A+ N + ++ R +QSD FS +E +D+IV Sbjct: 156 IAIACAERFPEADVDAVDLSFDALNVAEINIERHNLTHRVFPIQSDLFSRLLEEQYDLIV 215 Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY 229 +NPPY++ + + E ++P ++L G DGL+ + I +L DG+ E+G Sbjct: 216 TNPPYVDLEDLSDMPEEFH-YEPEMALGSGNDGLTITKEILRLAPNYLADDGVLVCEVG- 273 Query: 230 NQKVDVVRIF 239 N V ++ F Sbjct: 274 NSMVHLIEQF 283 >gi|187924448|ref|YP_001896090.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Burkholderia phytofirmans PsJN] gi|187715642|gb|ACD16866.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Burkholderia phytofirmans PsJN] Length = 294 Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 56/176 (31%), Positives = 87/176 (49%), Gaps = 11/176 (6%) Query: 91 PRIE-KRDVVRILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVS 147 P +E V +L+L TG+G CLA+L F VD+S ALE+A N + Sbjct: 119 PYVEDPEQVSAVLELCTGSG--CLAILAAHAFPNADIDAVDLSAPALEVAARNVADYKLD 176 Query: 148 ERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206 +R + D ++ + E +DVI+SNPPY+ + + L E + +P ++L GG+DG+ Sbjct: 177 DRIALFEGDLYAPLAERRYDVIISNPPYVNAASMQDLPAEYK-HEPNMALAGGVDGMDIV 235 Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262 R I L +G+ VEIG N++ V F L ++ G+D V L Sbjct: 236 RRIIADARNWLTDEGVLVVEIG-NERQHVEAAFGGLDLVWLST---SAGDDNVFLI 287 >gi|251788964|ref|YP_003003685.1| modification methylase, HemK family [Dickeya zeae Ech1591] gi|247537585|gb|ACT06206.1| modification methylase, HemK family [Dickeya zeae Ech1591] Length = 310 Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 49/156 (31%), Positives = 78/156 (50%), Gaps = 6/156 (3%) Query: 74 PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133 PR L++ A LP + ILDL TG+G + +A + P + VDIS A Sbjct: 113 PRSPIGELINQQFASILPHPPRH----ILDLCTGSGCIAIACAQAFPEAEVDAVDISADA 168 Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDP 192 L + + N +G+ ++SD F + + +D+IV+NPPY++ + L E R F+P Sbjct: 169 LAVTEQNIQQHGMEYNVTPIRSDLFRDLPAIQYDLIVTNPPYVDEEDMADLPQEYR-FEP 227 Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228 + L G DGL R I +L ++G+ E+G Sbjct: 228 ELGLAAGSDGLKLVRRILACAPDYLAEEGVLICEVG 263 >gi|289643791|ref|ZP_06475899.1| modification methylase, HemK family [Frankia symbiont of Datisca glomerata] gi|289506397|gb|EFD27388.1| modification methylase, HemK family [Frankia symbiont of Datisca glomerata] Length = 281 Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 55/203 (27%), Positives = 84/203 (41%), Gaps = 7/203 (3%) Query: 50 SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFS-------LPRIEKRDVVRIL 102 + ILGW F +R+ + F PR TE LV A+A + + + R ++ Sbjct: 58 PLEHILGWAWFCGLRIAVDPGVFVPRRRTEFLVQQAVALAQRLAAGRVGQPPNRPAAVVV 117 Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162 DL G+GAV +ALL + D+ A+ A+ N G L ++ Sbjct: 118 DLCCGSGAVGVALLMALDAVELYATDLDPAAVRCARRNLAGAGGQVYEGDLYEPLPVTLR 177 Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL 222 G D++ +N PY+ + + L E R + R++LDGG DGL R + + L G Sbjct: 178 GRVDILAANAPYVPTEEMGLLPPEARVHERRMALDGGTDGLDVLRRVTAEAPQWLAPGGR 237 Query: 223 CSVEIGYNQKVDVVRIFESRKLF 245 VE Q V L Sbjct: 238 LLVETSGRQAARTVETVARNGLL 260 >gi|330829720|ref|YP_004392672.1| adenine-specific methylase YfcB [Aeromonas veronii B565] gi|328804856|gb|AEB50055.1| adenine-specific methylase YfcB [Aeromonas veronii B565] Length = 315 Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 52/176 (29%), Positives = 90/176 (51%), Gaps = 15/176 (8%) Query: 56 GWRDFYNVRLTLSSDTFEPR-PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLA 114 GW + + R+ + PR P E++ + F K + RI+DL TG+G + + Sbjct: 105 GWEFYVDERVLI------PRSPIAEMVANRFAPFL-----KHEPTRIMDLCTGSGCIAII 153 Query: 115 LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNP 172 + E P + +DIS AL +A+ N +G+ ++ ++SD F + +D+IVSNP Sbjct: 154 MAHEFPEAEVDAIDISVDALNVAERNINDHGLEQQVIPIRSDLFRDLPAGDKYDLIVSNP 213 Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228 PY++S + L E R +P ++L G DGL + + + L +G+ VE+G Sbjct: 214 PYVDSEDMSDLPDEFR-HEPELALASGSDGLKLTKRLLAHAADFLKDNGVLVVEVG 268 >gi|165976362|ref|YP_001651955.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|303251386|ref|ZP_07337563.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307252569|ref|ZP_07534464.1| Uncharacterized adenine-specific methylase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|165876463|gb|ABY69511.1| putative adenine-specific methylase [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|302649740|gb|EFL79919.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306859974|gb|EFM91992.1| Uncharacterized adenine-specific methylase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] Length = 314 Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 45/143 (31%), Positives = 79/143 (55%), Gaps = 3/143 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 RILD+ TG+G + +A + P + VD+S AL++A+ N + V+ R + SD F+ Sbjct: 143 RILDMCTGSGCIAIACAERFPHAEVDAVDLSLDALDVAQINIERHQVAHRVFPISSDLFT 202 Query: 160 SV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 + + +D+IV+NPPY++ +D + E +P ++L G+DGL + I +L Sbjct: 203 DIPQDKYDLIVTNPPYVDQEDLDDMPQEFH-HEPELALGSGVDGLDITKRILAEAPNYLA 261 Query: 219 KDGLCSVEIGYNQKVDVVRIFES 241 +G+ E+G N V ++ F S Sbjct: 262 DNGVLVCEVG-NSMVHLIEQFPS 283 >gi|90414824|ref|ZP_01222791.1| putative adenine-specific methylase [Photobacterium profundum 3TCK] gi|90324067|gb|EAS40654.1| putative adenine-specific methylase [Photobacterium profundum 3TCK] Length = 310 Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 46/135 (34%), Positives = 73/135 (54%), Gaps = 2/135 (1%) Query: 95 KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154 +++ RI+DL TG+G + +A P + VDIS AL +A+ N +G+ ++ L+ Sbjct: 130 QQEPTRIMDLCTGSGCIGIACAHAFPDAEVDLVDISIDALAVAEQNINDHGLEQQVIPLR 189 Query: 155 SDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213 SD V + +D+IV+NPPY++ +D L E R +P + L G DGL R I Sbjct: 190 SDLLRDVPKDKYDLIVTNPPYVDQEDMDNLPEEFR-HEPELGLAAGTDGLKLVRRILANA 248 Query: 214 SRHLNKDGLCSVEIG 228 +L DG+ E+G Sbjct: 249 PDYLKDDGILICEVG 263 >gi|305433239|ref|ZP_07402395.1| protein-(glutamine-N5) methyltransferase [Campylobacter coli JV20] gi|304443940|gb|EFM36597.1| protein-(glutamine-N5) methyltransferase [Campylobacter coli JV20] Length = 266 Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 71/253 (28%), Positives = 114/253 (45%), Gaps = 19/253 (7%) Query: 11 LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70 LC + ++ D D + F L I R E I DF+ + + Sbjct: 25 LCEYLKKDRTWIFLNQDLEFDSKPYFEL---IKRFQSGEPFEYIFEKADFWGLEFKVKKG 81 Query: 71 TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130 PR ++E+L+ L + + IL++G G+G + + L KE K DI+ Sbjct: 82 VLIPRYDSEILLSQVLKIC----KNNNFQNILEIGFGSGILSIVLAKELGI-KITACDIN 136 Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE-SVIVDCLGLEVRD 189 KAL++A NA + V D D F ++ +D I SNPPYI+ S +D L V++ Sbjct: 137 PKALQLALENAKLHKVEHLIDFKLCD-FKQIKENYDFIFSNPPYIQNSYPID---LWVQN 192 Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLN-KDGLCSVEIGYNQKVDVVRIFESRKLFLVN 248 +P+ +L GG G Y + + ++ K + E GY+QKV + +I +K F Sbjct: 193 -EPKEALFGGEKG---YEILEEIITFSFERKVKFLACEFGYDQKVILKQIL-YQKNFQAE 247 Query: 249 AFKDYGGNDRVLL 261 F+D G DR + Sbjct: 248 FFQDEQGYDRAFV 260 >gi|152968275|ref|YP_001364059.1| modification methylase, HemK family [Kineococcus radiotolerans SRS30216] gi|151362792|gb|ABS05795.1| modification methylase, HemK family [Kineococcus radiotolerans SRS30216] Length = 272 Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 61/198 (30%), Positives = 93/198 (46%), Gaps = 16/198 (8%) Query: 38 LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97 L + + R + E + +LGW +F R ++ F PR + LVD A R D Sbjct: 46 LADLLARRVAGERLEDVLGWAEFAGRRYAVAPGVFVPRHRSAFLVDLVAA----RARAGD 101 Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 VV LDLG GTGA+ A+ + P D+ A+ A+ N V E D Sbjct: 102 VV--LDLGCGTGALVGAVRERVPGLVVHAADVDPAAVACARRNLPGAAVHE------GDL 153 Query: 158 FSSV----EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213 F+++ G DV+++N PY+ + + L E+R+ + R +LDGG DGL R + G Sbjct: 154 FAALPPTLRGRLDVVIANVPYVPTAQIAHLPAEMREHEDRRTLDGGGDGLDVLRRVLGGA 213 Query: 214 SRHLNKDGLCSVEIGYNQ 231 L+ G VE+ +Q Sbjct: 214 GDWLSARGRVFVELDEDQ 231 >gi|113868049|ref|YP_726538.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Ralstonia eutropha H16] gi|113526825|emb|CAJ93170.1| predicted methyltransferase [Ralstonia eutropha H16] Length = 297 Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 52/172 (30%), Positives = 83/172 (48%), Gaps = 7/172 (4%) Query: 94 EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153 E + +L+L TG+G + + P K VDIS AL +A+ N + +R Sbjct: 125 ETDSIGPVLELCTGSGCLPIVAAHVWPNAKIDAVDISPDALAVARRNVADYKMDDRIRLY 184 Query: 154 QSDWFSSVE--GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIAD 211 + D ++ + +DVI++NPPY+ + L E +PRI+L GG DG+ R I Sbjct: 185 EGDLYAPLPHGATYDVILTNPPYVNEGSMQALPPEYL-AEPRIALAGGDDGMDVVRRIIA 243 Query: 212 GVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFC 263 G HLN G+ VEIG N+ +V F ++ + G+++V L Sbjct: 244 GAKAHLNPGGVLVVEIG-NEHANVEAAFPELEIVWLPV---SAGDEQVFLLT 291 >gi|71893492|ref|YP_278938.1| protoporphirogen oxidase [Mycoplasma hyopneumoniae J] gi|72080479|ref|YP_287537.1| protoporphirogen oxidase [Mycoplasma hyopneumoniae 7448] Length = 236 Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 67/214 (31%), Positives = 110/214 (51%), Gaps = 24/214 (11%) Query: 28 SVLDDRQRFFLTNAI--VRSLKHE---SIHRILGWRDFYNVRLTLSSDTFEPRPETELLV 82 +L ++QR+ L I + +LK E I +I+G+ + V++ L F PR ET+ Sbjct: 7 ELLKEKQRYNLPLKISKLENLKLELDYPIQKIIGFIEMEGVKIFLDQKVFIPRYETQ--- 63 Query: 83 DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV---DISCKALEIAKS 139 + I+K D+V LDL +G+G + LAL K F + DIS +A+ AK Sbjct: 64 -ELILKIKKVIKKGDLV--LDLCSGSGFIGLALAK----FINAKITLADISDEAILQAKL 116 Query: 140 NAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG 198 NA N + + ++SD F+++ E F++IV+NPPY++ + L V +F+P+ +L Sbjct: 117 NAKYNNL--ELNIIKSDLFANIPEQKFNIIVANPPYLKE---EKLANSVLNFEPKTALFA 171 Query: 199 GIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232 + S Y I + + L DG EI YN + Sbjct: 172 WPEPFSFYEKILEKIDNFLADDGWIFFEIDYNSQ 205 >gi|319793475|ref|YP_004155115.1| protein-(glutamine-n5) methyltransferase, ribosomal protein l3-specific [Variovorax paradoxus EPS] gi|315595938|gb|ADU37004.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Variovorax paradoxus EPS] Length = 292 Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 56/189 (29%), Positives = 96/189 (50%), Gaps = 13/189 (6%) Query: 78 TELLVDSALAFSL-PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136 EL+ D ++ + L P + R+LDL TG G++ + P D+S +ALE+ Sbjct: 106 AELIADGSIDYWLGPHTQ-----RVLDLCTGNGSLAVLAALTYPDVTVDAADLSVEALEV 160 Query: 137 AKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL 196 A N + + R ++SD +++ G +D+++ NPPY+ S + L E R +P +SL Sbjct: 161 AAINVTRHELDARVKLVESDGLANLPGPYDLVLCNPPYVNSASMATLPAEYR-AEPELSL 219 Query: 197 DGGIDGLSHYRTI-ADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGG 255 GG DG+ R + AD SR +++ + +EIG N++ F ++ + G Sbjct: 220 AGGTDGMDFIRKLFADAPSR-MSEQAVLVLEIG-NERDYFDAAFPQLEVVW---LETSAG 274 Query: 256 NDRVLLFCR 264 D+VLL R Sbjct: 275 EDQVLLVTR 283 >gi|45656171|ref|YP_000257.1| protoporphyrinogen oxidase [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|45599405|gb|AAS68894.1| protoporphyrinogen oxidase [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 286 Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 57/194 (29%), Positives = 100/194 (51%), Gaps = 6/194 (3%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L + L ++ V+ + +L++ ++ I+ K++ I + FYN Sbjct: 29 DAEILLADLLNLQRVKLYVNFERLLNETEKNAYRERILERSKNKPTAYITSQKAFYNSIF 88 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 ++ + PRPETE LV+ L+ I +++V LDL TG+G + ++L + Sbjct: 89 FVNENVLIPRPETEELVEKVLSDFKGNIGEQNV---LDLCTGSGCIGISLKLARKDWNIT 145 Query: 126 GVDISCKALEIAKSNAVTN-GVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVDC 182 DIS +ALE+A NA+ G + L+SD F S+ E F++IV+NPPYI Sbjct: 146 LSDISKEALEVAAKNAIQILGEEKHIQFLESDLFLSIPKESKFNLIVTNPPYIPISDKAE 205 Query: 183 LGLEVRDFDPRISL 196 + +V D++P ++L Sbjct: 206 MMKDVIDYEPHLAL 219 >gi|115352116|ref|YP_773955.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Burkholderia ambifaria AMMD] gi|115282104|gb|ABI87621.1| [LSU ribosomal protein L3P]-glutamine N5-methyltransferase [Burkholderia ambifaria AMMD] Length = 302 Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 56/178 (31%), Positives = 87/178 (48%), Gaps = 16/178 (8%) Query: 94 EKRDVVRILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVSERFD 151 + V +L+L TG+G CLA+L S F VD+S KALE+A+ N + +R Sbjct: 123 DPEQVGAVLELCTGSG--CLAILAASAFPNAEIDAVDLSDKALEVARINVSDYSLDDRIT 180 Query: 152 TLQSDWFSSVEGL-------FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204 + D ++ + +DVI++NPPY+ + + L E R +P ++L GG DG+ Sbjct: 181 LHRGDLYAPLPAFRAEPDARYDVILTNPPYVNATSMAALPPEYR-HEPEMALAGGEDGMD 239 Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262 R I + L+ DG+ VEIG N++ V F +L G+D V L Sbjct: 240 IVRRIISEAHKWLHDDGVLVVEIG-NEREHVEAAFGGLEL---TWLPTSAGDDTVFLI 293 >gi|24213008|ref|NP_710489.1| protoporphyrinogen oxidase [Leptospira interrogans serovar Lai str. 56601] gi|24193693|gb|AAN47507.1| protoporphyrinogen oxidase [Leptospira interrogans serovar Lai str. 56601] Length = 286 Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 57/194 (29%), Positives = 100/194 (51%), Gaps = 6/194 (3%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L + L ++ V+ + +L++ ++ I+ K++ I + FYN Sbjct: 29 DAEILLADLLNLQRVKLYVNFERLLNETEKNAYRERILERSKNKPTAYITSQKAFYNSIF 88 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 ++ + PRPETE LV+ L+ I +++V LDL TG+G + ++L + Sbjct: 89 FVNENVLIPRPETEELVEKVLSDFKGNIGEQNV---LDLCTGSGCIGISLKLARKDWNIT 145 Query: 126 GVDISCKALEIAKSNAVTN-GVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVDC 182 DIS +ALE+A NA+ G + L+SD F S+ E F++IV+NPPYI Sbjct: 146 LSDISKEALEVATKNAIQILGEEKHIQFLESDLFLSIPKESKFNLIVTNPPYIPISDKAE 205 Query: 183 LGLEVRDFDPRISL 196 + +V D++P ++L Sbjct: 206 MMKDVIDYEPHLAL 219 >gi|212716436|ref|ZP_03324564.1| hypothetical protein BIFCAT_01360 [Bifidobacterium catenulatum DSM 16992] gi|212660689|gb|EEB21264.1| hypothetical protein BIFCAT_01360 [Bifidobacterium catenulatum DSM 16992] Length = 326 Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 65/247 (26%), Positives = 108/247 (43%), Gaps = 20/247 (8%) Query: 27 DSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL 86 ++V +RF + + R K E + I G F + L + F PRPETEL+V + Sbjct: 79 NTVAAAMERFH--SMVDRRAKREPLQHITGHAPFRYLDLKVGPGVFIPRPETELVVQEGI 136 Query: 87 AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146 ++ R +++DL G+GA+ LA E P + V+ S + + + N + Sbjct: 137 EWTTRHGMYR--AKVVDLCAGSGAIGLAFATEVPGSEVWAVEKSERTAQWTRRN--LDET 192 Query: 147 SERF------------DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194 ++R+ D Q + ++G D++++NPPY+ + + EVRD+DP + Sbjct: 193 TKRYPAIAGNYHLEIADATQMPTLNQLDGTIDIVLTNPPYVPLSDI-PVQPEVRDYDPDL 251 Query: 195 SLDGG-IDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDY 253 +L GG DG I S+ L GL +E Q + + V DY Sbjct: 252 ALYGGSADGTLIPERIISRASKLLKPGGLMVMEHDVTQGERLAAFARTCDFVDVVVHNDY 311 Query: 254 GGNDRVL 260 G R L Sbjct: 312 TGRPRYL 318 >gi|307729318|ref|YP_003906542.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Burkholderia sp. CCGE1003] gi|307583853|gb|ADN57251.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Burkholderia sp. CCGE1003] Length = 294 Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 55/175 (31%), Positives = 88/175 (50%), Gaps = 11/175 (6%) Query: 91 PRIEKRDVVR-ILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVS 147 P +E + V +L+L TG+G CLA+L F VD+S ALE+A N + Sbjct: 119 PYVEDPEQVSGVLELCTGSG--CLAILAAHAFPNADIDAVDLSAPALEVAARNVADYKLE 176 Query: 148 ERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206 +R + D ++ + + +DVI+SNPPY+ + + L E + +P ++L GG DG+ Sbjct: 177 DRIALFEGDLYAPLAQRRYDVIISNPPYVNAASMQELPAEYK-HEPEMALAGGADGMDIV 235 Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 R I L +DG+ +EIG N++ V F L ++ G+D V L Sbjct: 236 RRIIADARNWLTEDGVLVIEIG-NERHHVEAAFGGLNLVWLST---SAGDDNVFL 286 >gi|186476110|ref|YP_001857580.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Burkholderia phymatum STM815] gi|184192569|gb|ACC70534.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Burkholderia phymatum STM815] Length = 295 Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 57/176 (32%), Positives = 87/176 (49%), Gaps = 11/176 (6%) Query: 91 PRIEKRDVV-RILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVS 147 P +E + V +L+L TG+G CLA+L F VD+S ALE+A N + Sbjct: 119 PYVEDPEQVGAVLELCTGSG--CLAILAAYAFPNADIDAVDLSPAALEVATRNVQEYELE 176 Query: 148 ERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206 ER + D ++ + E +DVI++NPPY+ + + L E + +P ++L GG DG+ Sbjct: 177 ERIALFEGDLYAPLPERRYDVIITNPPYVNAESMKALPPEYQ-HEPAMALAGGADGMDIV 235 Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262 R I L DG+ VEIG N++ V F L ++ G+D V L Sbjct: 236 RRIIANARNWLTDDGVLVVEIG-NERAHVEAAFGGLDLVWMST---SAGDDNVFLI 287 >gi|15602255|ref|NP_245327.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Pasteurella multocida subsp. multocida str. Pm70] gi|18202826|sp|Q9CNN7|Y390_PASMU RecName: Full=Uncharacterized adenine-specific methylase PM0390 gi|12720638|gb|AAK02474.1| unknown [Pasteurella multocida subsp. multocida str. Pm70] Length = 338 Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 49/167 (29%), Positives = 86/167 (51%), Gaps = 7/167 (4%) Query: 74 PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133 PR L+ A LP+ KR ILD+ TG+G + +A + P + VD+S A Sbjct: 145 PRSPISALIQEGFAPLLPQEPKR----ILDMCTGSGCIAIACAERFPEAEVDAVDLSSDA 200 Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDP 192 L++A+ N + + +R +QSD F + + +D+IV+NPPY++ + + E +P Sbjct: 201 LDVAQINIERHNMLDRVYPIQSDLFHDLAKDQYDLIVANPPYVDLEDLSDMPAEFH-HEP 259 Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 ++L G+DGL + I +L + G+ E+G N V ++ + Sbjct: 260 EMALGSGVDGLEITKKILYAAPDYLTEQGVLVCEVG-NSMVHLIEQY 305 >gi|302535838|ref|ZP_07288180.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptomyces sp. C] gi|302444733|gb|EFL16549.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptomyces sp. C] Length = 261 Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 58/198 (29%), Positives = 90/198 (45%), Gaps = 11/198 (5%) Query: 38 LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97 L + R + E + ++GW +F +R+ + + F PR TE L A+ + P Sbjct: 36 LAGMVARRVDGEPLEHVVGWAEFCGLRVEVGAGAFVPRRRTEFLAREAVELARPG----- 90 Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGV---GVDISCKALEIAKSNAVTNGVSERFDTLQ 154 +LDL G GA+ A+ + P GV DI AL A+ N G + L Sbjct: 91 -AVVLDLCCGVGALGAAVAAQVP--GGVELHAADIDPAALAYARRNVAPYGGAVWEGDLY 147 Query: 155 SDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214 + + + G DV++ N PY+ + + + E RD +P +SLDGG DGL +R +A G Sbjct: 148 AALPAGLRGRVDVLMVNAPYVPTGEIGLMPPEARDHEPLVSLDGGADGLDVHRRVAAGAL 207 Query: 215 RHLNKDGLCSVEIGYNQK 232 L G +E Q Sbjct: 208 EWLAPGGHLLMETSARQA 225 >gi|207743262|ref|YP_002259654.1| methylase/methyltransferase protein [Ralstonia solanacearum IPO1609] gi|206594659|emb|CAQ61586.1| methylase/methyltransferase protein [Ralstonia solanacearum IPO1609] Length = 304 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 55/168 (32%), Positives = 84/168 (50%), Gaps = 11/168 (6%) Query: 101 ILDLGTGTGAVCLALLK--ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 +L+L TG+G CLA+L + P VD+S AL +A+ N +++R + D + Sbjct: 141 VLELCTGSG--CLAILAALQWPNATLDAVDLSQDALVVAQRNVDDFDLNDRIRLHEGDLY 198 Query: 159 SSVEG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216 + + +DVI++NPPY+ + L E R +PR++L GG DG+ R I RH Sbjct: 199 APLPPGVHYDVILTNPPYVNETSMQALPPEYR-AEPRMALAGGTDGMDIVRRILADAPRH 257 Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 L G+ VEIG N++ +V F L G D+V L R Sbjct: 258 LKPHGVLVVEIG-NERENVEAAFPDLDLVW---LPTSAGEDQVFLVTR 301 >gi|50121993|ref|YP_051160.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Pectobacterium atrosepticum SCRI1043] gi|49612519|emb|CAG75969.1| conserved hypothetical protein [Pectobacterium atrosepticum SCRI1043] Length = 310 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 49/156 (31%), Positives = 79/156 (50%), Gaps = 6/156 (3%) Query: 74 PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133 PR L+++ LP++ ILDL TG+G + +A + P + VDIS A Sbjct: 113 PRSPIGELINNYFDEQLPKVPNL----ILDLCTGSGCIAIACAQAFPEAEVDAVDISSDA 168 Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDP 192 L + + N + + R ++SD F + + +D+IV+NPPY++ + L E R F+P Sbjct: 169 LAVTEQNIQQHELEYRVTPIRSDLFRDLPAIRYDLIVTNPPYVDEEDMSDLPQEFR-FEP 227 Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228 + L G DGL R I +L+ DG+ E+G Sbjct: 228 ELGLAAGNDGLDLVRRILACAPDYLSDDGVLICEVG 263 >gi|83748821|ref|ZP_00945834.1| Ribosomal protein L3P methyltransferase [Ralstonia solanacearum UW551] gi|83724513|gb|EAP71678.1| Ribosomal protein L3P methyltransferase [Ralstonia solanacearum UW551] Length = 300 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 55/168 (32%), Positives = 84/168 (50%), Gaps = 11/168 (6%) Query: 101 ILDLGTGTGAVCLALLK--ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 +L+L TG+G CLA+L + P VD+S AL +A+ N +++R + D + Sbjct: 137 VLELCTGSG--CLAILAALQWPNATLDAVDLSQDALVVAQRNVDDFDLNDRIRLHEGDLY 194 Query: 159 SSVEG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216 + + +DVI++NPPY+ + L E R +PR++L GG DG+ R I RH Sbjct: 195 APLPPGVHYDVILTNPPYVNETSMQALPPEYR-AEPRMALAGGTDGMDIVRRILADAPRH 253 Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 L G+ VEIG N++ +V F L G D+V L R Sbjct: 254 LKPHGVLVVEIG-NERENVEAAFPDLDLVW---LPTSAGEDQVFLVTR 297 >gi|126348204|emb|CAJ89925.1| putative methyltransferase [Streptomyces ambofaciens ATCC 23877] Length = 273 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 62/206 (30%), Positives = 91/206 (44%), Gaps = 14/206 (6%) Query: 38 LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97 L + + R + + +LGW +F +R+ ++ F PR TE LV ALA + D Sbjct: 53 LMSLVDRRVTGLPLELVLGWAEFRGLRIAVAPGVFVPRRRTEFLVAEALA------QAPD 106 Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG----VSERFDTL 153 ++DL G+GAV AL + D+ A+ A N G + FD L Sbjct: 107 AAVVVDLCCGSGAVGAALAAALDRPEVHAADVDPAAVRCALGNLADAGGQVHTGDLFDAL 166 Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213 ++ G D++ +N PY+ + V L E RD +P ++LDGG DGL R +A Sbjct: 167 PD----ALRGRVDILAANVPYVPTGEVALLPAEARDHEPLVALDGGADGLDVLRRVAAEA 222 Query: 214 SRHLNKDGLCSVEIGYNQKVDVVRIF 239 R L G VE Q V F Sbjct: 223 PRWLAPGGCLLVETSERQAPAAVDAF 248 >gi|307245855|ref|ZP_07527940.1| Uncharacterized adenine-specific methylase [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307254828|ref|ZP_07536654.1| Uncharacterized adenine-specific methylase [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307259270|ref|ZP_07540999.1| Uncharacterized adenine-specific methylase [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306853215|gb|EFM85435.1| Uncharacterized adenine-specific methylase [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306862199|gb|EFM94167.1| Uncharacterized adenine-specific methylase [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306866637|gb|EFM98496.1| Uncharacterized adenine-specific methylase [Actinobacillus pleuropneumoniae serovar 11 str. 56153] Length = 314 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 45/143 (31%), Positives = 79/143 (55%), Gaps = 3/143 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 RILD+ TG+G + +A + P + VD+S AL++A+ N + V+ R + SD F+ Sbjct: 143 RILDMCTGSGCIAIACAERFPHAEVDAVDLSLDALDVAQINIERHQVAHRVFPISSDLFT 202 Query: 160 SV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 + + +D+IV+NPPY++ +D + E +P ++L G+DGL + I +L Sbjct: 203 VIPQDKYDLIVTNPPYVDQEDLDDMPQEFH-HEPELALGSGVDGLDITKRILAEAPNYLA 261 Query: 219 KDGLCSVEIGYNQKVDVVRIFES 241 +G+ E+G N V ++ F S Sbjct: 262 DNGVLVCEVG-NSMVHLIEQFPS 283 >gi|330469858|ref|YP_004407601.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Verrucosispora maris AB-18-032] gi|328812829|gb|AEB47001.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Verrucosispora maris AB-18-032] Length = 297 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 61/229 (26%), Positives = 98/229 (42%), Gaps = 12/229 (5%) Query: 44 RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103 R + E + + G F ++ L + F PRPETELL + R R ++D Sbjct: 55 RRARREPLQHLTGNAAFRHLELAVGPGVFVPRPETELL--AGWGIEQARRAARPRPLVVD 112 Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-------RFDTLQSD 156 L +G+GA+ L++ +E P + V V+ S AL + NA + D D Sbjct: 113 LCSGSGAIALSVAQEVPDARVVAVERSSAALAWLRRNAADRAAAGDRAIEVVEADVTDPD 172 Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216 + + G DV++ NPPY+ + + EV DP ++ GG DGL+ R + + + Sbjct: 173 LLAGLVGQVDVLLCNPPYVPQAV--AVPPEVAGHDPAEAVFGGADGLTVIRPVIERAATL 230 Query: 217 LNKDGLCSVEIGYNQKVDVVRIF-ESRKLFLVNAFKDYGGNDRVLLFCR 264 L G VE V + E + ++A +D G R R Sbjct: 231 LRPGGQLGVEHDDTHGAAVPELLAEDGRYTAISAHRDLAGRARFATASR 279 >gi|1575339|gb|AAC44869.1| PapM [Streptomyces pristinaespiralis] Length = 292 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 65/230 (28%), Positives = 105/230 (45%), Gaps = 8/230 (3%) Query: 17 LSSHQVIVDP---DSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFE 73 L++H V P D+ L + + R L E RI+G F R L+ F Sbjct: 36 LAAHACQVAPGDLDTCLAGPVPPRFWHYVRRRLTREPAERIVGHAYFMGHRFDLAPGVFV 95 Query: 74 PRPETELLVDSALAFSLPRIEKRDVVR--ILDLGTGTGAVCLALLKESPFFKGVGVDISC 131 P+PETE + A+A L + +R ++DL G G + + L + P + +G+++S Sbjct: 96 PKPETEEITRDAIA-RLEALVRRGTTAPLVVDLCAGPGTMAVTLARHVPAARVLGIELSQ 154 Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFD 191 A A+ NA G + D F + G D++V+NPPYI + + EV + D Sbjct: 155 AAARAARRNARGTG-ARIVQGDARDAFPELSGTVDLVVTNPPYI-PIGLRTSAPEVLEHD 212 Query: 192 PRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 P ++L G +GL R + +R L G+ +E G Q V +F + Sbjct: 213 PPLALWAGEEGLGMIRAMERTAARLLAPGGVLLLEHGSYQLASVPALFRA 262 >gi|111225293|ref|YP_716087.1| N5-glutamine methyltransferase [Frankia alni ACN14a] gi|111152825|emb|CAJ64569.1| N5-glutamine methyltransferase, modifies release factors RF-1 and RF-2 [Frankia alni ACN14a] Length = 309 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 67/223 (30%), Positives = 99/223 (44%), Gaps = 8/223 (3%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101 + R + E + + G F + L + F PRPETE +V ALA +LP + V Sbjct: 70 VARRARREPLQHLTGLAGFRYLDLAVGPGVFIPRPETESVVGWALA-ALPSVSGGGPV-C 127 Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS---ERFDTLQSDWF 158 +DL G+GA+ L+L E P + V++ AL + N +G+ D Sbjct: 128 VDLCAGSGAIALSLAGEVPGARVHAVEVDPAALGWLRRNVAASGLPVTVHEADVTAPPIA 187 Query: 159 S--SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216 S + G D++VSNPPY+ D + EV + DP +L GG DGL R + +R Sbjct: 188 SLARLAGSVDLVVSNPPYLPDADRDEVEPEVGEHDPPRALWGGADGLDVVRAVVALAARL 247 Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRKLFL-VNAFKDYGGNDR 258 L GL +VE V + + + V D G DR Sbjct: 248 LRPGGLLAVEHADGHGVAAPGLLRADGRWAEVADHPDLAGRDR 290 >gi|332288130|ref|YP_004418982.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Gallibacterium anatis UMN179] gi|330431026|gb|AEC16085.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Gallibacterium anatis UMN179] Length = 320 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 53/164 (32%), Positives = 90/164 (54%), Gaps = 7/164 (4%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 RILD+ TG+G + +A + P + VDIS AL +A+ N + + + LQSD F+ Sbjct: 146 RILDMCTGSGCIAIACADKFPNAEIDAVDISLDALNVAEINIANHHLEHQVFPLQSDLFN 205 Query: 160 SV--EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217 ++ EG +D+IVSNPPY+++ + + E +P ++L+ G DGL + I +L Sbjct: 206 NLPKEG-YDLIVSNPPYVDAEDLANMPEEFSH-EPVLALEAGNDGLILAKRIIAAAPEYL 263 Query: 218 NKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 N +G+ E+G N V ++ F + + FK +GG+ +L Sbjct: 264 NDNGVLVCEVG-NSMVHLIEQFPTVPFEWIK-FK-HGGDGVFML 304 >gi|89891629|ref|ZP_01203133.1| putative protoporphyrinogen oxidase [Flavobacteria bacterium BBFL7] gi|89516176|gb|EAS18839.1| putative protoporphyrinogen oxidase [Flavobacteria bacterium BBFL7] Length = 281 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 63/214 (29%), Positives = 102/214 (47%), Gaps = 12/214 (5%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110 I I G FY + ++ T PR ETE LVD + + + I+D+GTGTG Sbjct: 71 IQYITGKAHFYGHEIVVNEHTLIPRQETEELVDMIIKDH----KTESYLNIIDIGTGTGC 126 Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS--SVEGLFDVI 168 + L+L P +D+S +AL A+SNA N + T+ D + + +D+I Sbjct: 127 IGLSLKAAKPDCIVTLMDVSEEALATAQSNA--NHLKTPVKTILQDVLALDELPEKYDII 184 Query: 169 VSNPPYIESVIVDCLGLEVRDFDPRISLDGGID-GLSHYRTIADGVSRHLNKDGLCSVEI 227 VSNPPY+ ++ + V + +P ++L D L YR I + L +G+ EI Sbjct: 185 VSNPPYVRNLEKKEIHDNVLENEPHLALFVEDDNALVFYRKIMELAKIALQPNGILYFEI 244 Query: 228 GYNQKV-DVVRIFESRKLFLVNAFKDYGGNDRVL 260 NQ + + ++ + F +KD GN R++ Sbjct: 245 --NQYLPEEMKALATELGFESEVYKDLNGNYRMM 276 >gi|54308160|ref|YP_129180.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Photobacterium profundum SS9] gi|46912588|emb|CAG19378.1| putative adenine-specific methylase [Photobacterium profundum SS9] Length = 310 Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 46/131 (35%), Positives = 70/131 (53%), Gaps = 2/131 (1%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 RI+DL TG+G + +A P + VDIS AL +A+ N +G+ ++ L+SD Sbjct: 134 TRIMDLCTGSGCIGIACAHAFPEAEVDLVDISIDALAVAEQNIQDHGLEQQVIPLRSDLL 193 Query: 159 SSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217 V + +D+IV+NPPY++ +D L E R +P + L G DGL R I +L Sbjct: 194 RDVPKDKYDLIVTNPPYVDQEDMDNLPEEFR-HEPELGLAAGTDGLKLVRRILANAPDYL 252 Query: 218 NKDGLCSVEIG 228 DG+ E+G Sbjct: 253 KDDGILICEVG 263 >gi|117923619|ref|YP_864236.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Magnetococcus sp. MC-1] gi|117607375|gb|ABK42830.1| [LSU ribosomal protein L3P]-glutamine N5-methyltransferase [Magnetococcus sp. MC-1] Length = 340 Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 54/197 (27%), Positives = 91/197 (46%), Gaps = 6/197 (3%) Query: 47 KHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGT 106 + + ++ I G F R + PR E ++D R + R+LDL T Sbjct: 117 QRKPVNYITGEAWFAGHRFVVDERVLIPRSRIENVLDDPDGLLGLMEGARPLKRMLDLCT 176 Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-F 165 G+G + + P+ + VD+S AL +A N + V+ER ++S+ F + G + Sbjct: 177 GSGCLAITAALHYPWLQVDAVDLSADALAVAAENVKRHRVTERVRLVRSNLFEKLTGACY 236 Query: 166 DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225 D+I++NPPY+ + I L E +P+++L+ G DGL I + +L G+ Sbjct: 237 DLILTNPPYVPTRIYAGLAAEYHR-EPKMALEAGGDGLDLVIPILQQAAEYLEPGGILLC 295 Query: 226 EIGYNQKVDVVRIFESR 242 E+G D I E R Sbjct: 296 EVG----DDTQEIMEQR 308 >gi|119775295|ref|YP_928035.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Shewanella amazonensis SB2B] gi|119767795|gb|ABM00366.1| Site-specific DNA-methyltransferase (adenine-specific) [Shewanella amazonensis SB2B] Length = 314 Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 50/151 (33%), Positives = 81/151 (53%), Gaps = 4/151 (2%) Query: 91 PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150 P + + V R+LDL TG+G + +A + +DIS AL++A+ N ++G+ ER Sbjct: 127 PWLYNKPVNRVLDLCTGSGCIAIACAHTFEDAEVDALDISEDALDVAQINVESHGLVERV 186 Query: 151 DTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208 +QSD FS++ +D+IVSNPPY++ + + E +P I L G DGL + Sbjct: 187 FPMQSDLFSAIPKGPQYDLIVSNPPYVDEEDIGDMPDEYH-HEPAIGLASGRDGLDITKR 245 Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 I + +L G+ VE+G N V ++ F Sbjct: 246 ILANAADYLTPSGILVVEVG-NSMVHLMEQF 275 >gi|319941614|ref|ZP_08015938.1| site-specific DNA-methyltransferase [Sutterella wadsworthensis 3_1_45B] gi|319804844|gb|EFW01698.1| site-specific DNA-methyltransferase [Sutterella wadsworthensis 3_1_45B] Length = 310 Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 72/233 (30%), Positives = 112/233 (48%), Gaps = 15/233 (6%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRIL---GWRD 59 AL D+ +CR L + D+ L + + + I R + ++ L W Sbjct: 43 ALEDASFLICRALKLPFENFDMFLDAALTHNELVRIVHLIDRRVHDKTPTAYLLKEAW-- 100 Query: 60 FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR-ILDLGTGTGAVCLALLKE 118 R + PR L++ LA P + V+ +LDL TG+G CLA+L + Sbjct: 101 LTEHRFYIDERALIPRSYIAELLEEDLA---PWAADPEAVQSVLDLCTGSG--CLAILAQ 155 Query: 119 SPF--FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYI 175 F K G DIS ALE+AK N + E + +QSD F +++G FD+I+SNPPY+ Sbjct: 156 GAFPNAKVTGSDISQAALEVAKINRRDYDMEETLELVQSDLFENLQGRRFDIIISNPPYV 215 Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228 + ++ L E R +P ++L G DG+ R I + HL ++G VE+G Sbjct: 216 TTDAMERLPSEYR-HEPALALAAGADGMDVVRRILAEAADHLTEEGFIVVEVG 267 >gi|300691621|ref|YP_003752616.1| adenine-specific methylase [Ralstonia solanacearum PSI07] gi|299078681|emb|CBJ51339.1| putative adenine-specific methylase [Ralstonia solanacearum PSI07] Length = 304 Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 62/209 (29%), Positives = 98/209 (46%), Gaps = 13/209 (6%) Query: 60 FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK-- 117 + +R + PR L++ LA LP + +L+L TG+G CLA+L Sbjct: 102 MHGMRFYVDERVIVPRSFIGELLEDGLAPWLPY--EDGPTDVLELCTGSG--CLAILAAL 157 Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYI 175 + P VD+S AL +A+ N +++R + D ++ + +DVI++NPPY+ Sbjct: 158 QWPNATLDAVDLSPDALVVAQRNVDDYHLNDRIRLHEGDLYAPLPPGVHYDVILTNPPYV 217 Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235 + L E R +PR++L GG DG+ R I RHL G+ VEIG N++ +V Sbjct: 218 NETSMQALPPEYR-AEPRMALAGGTDGMDIVRRILADAPRHLKPHGVLVVEIG-NERENV 275 Query: 236 VRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 F L G ++V L R Sbjct: 276 EAAFPDLDLVW---LPTSAGEEQVFLVTR 301 >gi|239917333|ref|YP_002956891.1| putative methylase of HemK family [Micrococcus luteus NCTC 2665] gi|281414187|ref|ZP_06245929.1| putative methylase of HemK family protein [Micrococcus luteus NCTC 2665] gi|239838540|gb|ACS30337.1| putative methylase of HemK family [Micrococcus luteus NCTC 2665] Length = 300 Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 80/273 (29%), Positives = 117/273 (42%), Gaps = 26/273 (9%) Query: 6 DSHSFLCRVTGLSSHQVI--VDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63 D+ L V GL ++ V +V + Q + R E + + G F+ + Sbjct: 28 DAELLLGHVLGLDRGALLARVFAGAVAEPAQAAGFEALVGRRAAREPVQHLTGVAHFHGL 87 Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 L + F PRPETELLV++ +A R VV DL TG+GA+ +A+ + + + Sbjct: 88 DLAVGPGVFIPRPETELLVEAVVADLAARPAAGVVV---DLCTGSGAIAVAV---AAWGE 141 Query: 124 GVGVDISCKALEI-------AKSNAVTNGVSERFDTLQSDWFSS---VEGLFDVIVSNPP 173 G ++ A+E+ A+ N GV D Q D + +EG DV+VSNPP Sbjct: 142 ARGRPLAVTAVELDPTAADWARRNLAPRGV----DLRQGDALVACPDLEGRVDVVVSNPP 197 Query: 174 YIESVIVDCLGLEVRDFDPRISLDGG-IDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232 Y+ V E R DP +L GG GL R IA + L DGL ++E Q Sbjct: 198 YVPEAEVPAQ-PEAR-LDPARALYGGDAPGLRIPRAIAHRAAELLAPDGLFAMEHHETQG 255 Query: 233 VDVVRIFESRKLFL-VNAFKDYGGNDRVLLFCR 264 ++ + F V D DR L R Sbjct: 256 PALLAALGADPRFTGVRVHPDLTARDRFLTARR 288 >gi|53729016|ref|ZP_00134269.2| COG2890: Methylase of polypeptide chain release factors [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|126208419|ref|YP_001053644.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Actinobacillus pleuropneumoniae L20] gi|307250187|ref|ZP_07532145.1| Uncharacterized adenine-specific methylase [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|307256997|ref|ZP_07538773.1| Uncharacterized adenine-specific methylase [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|126097211|gb|ABN74039.1| hypothetical adenine-specific methylase [Actinobacillus pleuropneumoniae serovar 5b str. L20] gi|306857786|gb|EFM89884.1| Uncharacterized adenine-specific methylase [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306864481|gb|EFM96388.1| Uncharacterized adenine-specific methylase [Actinobacillus pleuropneumoniae serovar 10 str. D13039] Length = 314 Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 45/143 (31%), Positives = 79/143 (55%), Gaps = 3/143 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 RILD+ TG+G + +A + P + VD+S AL++A+ N + V+ R + SD F+ Sbjct: 143 RILDMCTGSGCIAIACAERFPHAEVDAVDLSLDALDVAQINIERHQVAHRVFPISSDLFT 202 Query: 160 SV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 + + +D+IV+NPPY++ +D + E +P ++L G+DGL + I +L Sbjct: 203 DIPQDKYDLIVTNPPYVDQEDLDDMPQEFH-HEPELALGSGVDGLDITKRILAEAPNYLA 261 Query: 219 KDGLCSVEIGYNQKVDVVRIFES 241 +G+ E+G N V ++ F S Sbjct: 262 DNGVLVCEVG-NSMVHLMEQFPS 283 >gi|119952994|ref|YP_945203.1| peptide release factor-glutamine N5-methyltransferase [Borrelia turicatae 91E135] gi|119861765|gb|AAX17533.1| peptide release factor-glutamine N5-methyltransferase [Borrelia turicatae 91E135] Length = 277 Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 58/211 (27%), Positives = 103/211 (48%), Gaps = 14/211 (6%) Query: 22 VIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELL 81 ++ + + L ++ L+ I R I+ IL ++F + ++ PR +TE L Sbjct: 35 ILANINKNLTKQEEHKLSCQINRIRSGTPINYILKTKEFMGIEFYINKHVLIPREDTECL 94 Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV--DISCKALEIAKS 139 V+ AL +I+K ++ +ILDL G+G + L + + + K DIS KAL+++ Sbjct: 95 VEEALI----QIKKHNLNKILDLCCGSGCIGLTI---AHYLKCKVTLSDISNKALKVSLK 147 Query: 140 NAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDF-DPRISLDG 198 N + + SD + F++I++NPPY+ D L ++ + +PRI+L G Sbjct: 148 NTQKLKLENYIEIQYSDLLKYINKEFELIITNPPYLNK---DELKIKEKLIKEPRIALLG 204 Query: 199 -GIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228 G DGL + I L K+GL +E+ Sbjct: 205 FGKDGLEIPKKIIRQAKHKLAKNGLLIIEMA 235 >gi|209554022|ref|YP_002284417.1| methyltransferase, HemK family [Ureaplasma urealyticum serovar 10 str. ATCC 33699] gi|209541523|gb|ACI59752.1| methyltransferase, HemK family [Ureaplasma urealyticum serovar 10 str. ATCC 33699] Length = 290 Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 63/222 (28%), Positives = 107/222 (48%), Gaps = 11/222 (4%) Query: 46 LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLG 105 + + + RILG+ F R + + F R ETELLVD + + + + ++D+ Sbjct: 65 INEKPLERILGYGYFCGRRFCVDENVFAFRVETELLVD--VINKIIKQSTHQIKSVIDVC 122 Query: 106 TGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN---GVSERFDTLQSDWFSSVE 162 G+G + L++ +DIS A+ +K NA + G++ ++Q +F + Sbjct: 123 CGSGVLGLSVKMNFNNLDVSLLDISLDAISNSKKNAQYHNIEGINYLHKSMQK-YFLHTK 181 Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG--GIDGLSHYRTIADGVSRHLNKD 220 FD+I+ NPPYI+S L +V D+DP +L DG+S Y I + +S NK Sbjct: 182 KRFDLIICNPPYIKSDYQ--LDKQVLDYDPLNALVDFENKDGISFYLFIINNISLICNKK 239 Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAF-KDYGGNDRVLL 261 EIGY+QK + + + + + F DY R+L+ Sbjct: 240 FTIVFEIGYDQKTILENVLKKNEFPIFYYFINDYNNLYRILV 281 >gi|207723342|ref|YP_002253741.1| methylase/methyltransferase protein [Ralstonia solanacearum MolK2] gi|206588540|emb|CAQ35503.1| methylase/methyltransferase protein [Ralstonia solanacearum MolK2] Length = 304 Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 54/168 (32%), Positives = 84/168 (50%), Gaps = 11/168 (6%) Query: 101 ILDLGTGTGAVCLALLK--ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 +L+L TG+G CLA+L + P VD+S AL +A+ N +++R + D + Sbjct: 141 VLELCTGSG--CLAILAALQWPNATLDAVDLSQDALVVAQRNVDDFDLNDRIRLHEGDLY 198 Query: 159 SSVEG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216 + + +DVI++NPPY+ + L E R +PR++L GG DG+ R I RH Sbjct: 199 APLPPGVHYDVILTNPPYVNETSMQALPPEYR-AEPRMALAGGTDGMDIVRRILADAPRH 257 Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 L G+ +EIG N++ +V F L G D+V L R Sbjct: 258 LKPHGVLVIEIG-NERENVEAAFPDLDLVW---LPTSAGEDQVFLVTR 301 >gi|317125569|ref|YP_004099681.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Intrasporangium calvum DSM 43043] gi|315589657|gb|ADU48954.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Intrasporangium calvum DSM 43043] Length = 291 Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 70/219 (31%), Positives = 107/219 (48%), Gaps = 35/219 (15%) Query: 6 DSHSFLCRVTGLSSHQV----IVD---PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWR 58 D+ V G+++H+V IV PDS + A L+H + G Sbjct: 26 DAVELAAHVLGVAAHEVRRRMIVGGSLPDSFDEAYAAVLAERARRVPLQH-----LTGRA 80 Query: 59 DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRI--EKRDVVRILDLGTGTGAVCLALL 116 F + L + F PRPETE++V+ ALA + R+ + +R++DL +G+GA+ LA+ Sbjct: 81 PFRTLTLHVGPGVFVPRPETEVVVELALA-EVDRLLGTRPSGIRLVDLCSGSGAIALAVK 139 Query: 117 KESPFFKGVGVDISCKALEIAKSN--------AVTNGVSERFDTLQSDWFSSVEGLFDVI 168 E P +++S A+ A +N A+ G + + DW SV D++ Sbjct: 140 TERPRVHVRAIELSGDAVAWATANRDRLGLDVAILQG--DATEPAIPDWSGSV----DLV 193 Query: 169 VSNPPYIES--VIVDCLGLEVRDFDPRISLDGGI-DGLS 204 +NPPYI S V VD EVRD DP ++L GG DGL+ Sbjct: 194 TANPPYIPSDAVPVDP---EVRDHDPEVALYGGSEDGLA 229 >gi|303252986|ref|ZP_07339141.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|307247931|ref|ZP_07529965.1| Uncharacterized adenine-specific methylase [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|302648177|gb|EFL78378.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|306855581|gb|EFM87750.1| Uncharacterized adenine-specific methylase [Actinobacillus pleuropneumoniae serovar 2 str. S1536] Length = 314 Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 46/149 (30%), Positives = 80/149 (53%), Gaps = 3/149 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 RILD+ TG+G + +A + P + VD+S AL++A+ N + V+ R + SD F+ Sbjct: 143 RILDMCTGSGCIAIACAERFPHAEVDAVDLSLDALDVAQINIERHQVAHRVFPISSDLFT 202 Query: 160 SV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 + + +D+IV+NPPY++ +D + E +P ++L G+DGL + I +L Sbjct: 203 DIPQDKYDLIVTNPPYVDQEDLDDMPQEFH-HEPELALGSGVDGLDITKRILAEAPNYLA 261 Query: 219 KDGLCSVEIGYNQKVDVVRIFESRKLFLV 247 +G+ E+G N V ++ F S V Sbjct: 262 DNGVLVCEVG-NSMVHLMEQFPSVPFHWV 289 >gi|260772337|ref|ZP_05881253.1| hypothetical adenine-specific methylase yfcB [Vibrio metschnikovii CIP 69.14] gi|260611476|gb|EEX36679.1| hypothetical adenine-specific methylase yfcB [Vibrio metschnikovii CIP 69.14] Length = 234 Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 41/131 (31%), Positives = 72/131 (54%), Gaps = 2/131 (1%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 RI+DL TG+G + +A P + +DIS AL++A+ N +G+ ++ ++SD F Sbjct: 58 TRIMDLCTGSGCIAIACAYAFPEAEVDAIDISADALQVAEQNIQDHGLEQQVFPIRSDLF 117 Query: 159 SSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217 + + +D+IV+NPPY++ ++ L E + +P + L G DGL R I +L Sbjct: 118 RDLPKEQYDIIVTNPPYVDQEDMNSLPDEFK-HEPELGLAAGTDGLKLARRILANAPHYL 176 Query: 218 NKDGLCSVEIG 228 +G+ E+G Sbjct: 177 TDNGILVCEVG 187 >gi|149188130|ref|ZP_01866425.1| N5-glutamine methyltransferase [Vibrio shilonii AK1] gi|148838118|gb|EDL55060.1| N5-glutamine methyltransferase [Vibrio shilonii AK1] Length = 310 Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 43/134 (32%), Positives = 73/134 (54%), Gaps = 2/134 (1%) Query: 96 RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155 + VRI+DL TG+G + +A P + +DIS ALE+A+ N +G+ ++ ++S Sbjct: 131 EEPVRIMDLCTGSGCIAIACAHAFPDAEVDAIDISTDALEVAEQNVQDHGLEQQVFPIRS 190 Query: 156 DWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214 D F + + +++IVSNPPY++ ++ L E +P + L G DGL R I Sbjct: 191 DLFRDLPKEKYNLIVSNPPYVDEEDMNSLPEEFT-HEPELGLAAGTDGLKLVRRILSNAP 249 Query: 215 RHLNKDGLCSVEIG 228 +L +G+ E+G Sbjct: 250 DYLTDNGILICEVG 263 >gi|124028185|ref|YP_001013505.1| methyltransferase [Hyperthermus butylicus DSM 5456] gi|123978879|gb|ABM81160.1| predicted Methyltransferase [Hyperthermus butylicus DSM 5456] Length = 198 Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 47/130 (36%), Positives = 70/130 (53%), Gaps = 13/130 (10%) Query: 62 NVRLTLSSDTFEPRP---ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118 V +S++ F PR T LL++ A+ + +LD+G G GA+ + L K Sbjct: 26 TVEFYVSTEVFSPREVDEGTRLLIEHAIV--------PEEGTVLDMGCGYGAIGITLAKA 77 Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIES 177 P V VD++ KA+E+A+ NA NGV R + LQ D + V+G FD I+SNPP Sbjct: 78 HPRLHVVMVDVNPKAVELARLNARHNGVENRVEVLQGDLYEPVKGYHFDAIISNPPLAAG 137 Query: 178 V-IVDCLGLE 186 + I++ L LE Sbjct: 138 MKIIEKLILE 147 >gi|284009280|emb|CBA76407.1| methylase [Arsenophonus nasoniae] Length = 310 Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 43/129 (33%), Positives = 73/129 (56%), Gaps = 2/129 (1%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 ILD+ TG+G + +A E P + VDIS AL + + N +G ++R + SD F + Sbjct: 136 ILDMCTGSGCIAIACAHEFPQAQIDAVDISVDALAVTEQNITAHGFADRIVPICSDLFLN 195 Query: 161 VEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 + + ++V+V+NPPY+++ + L E +P+++L G DGL R I SR L + Sbjct: 196 MPPIKYNVMVTNPPYVDAEDMSDLPAEYL-VEPKLALAAGSDGLKLVRRILANASRFLTE 254 Query: 220 DGLCSVEIG 228 +G+ E+G Sbjct: 255 NGVLICEVG 263 >gi|299142047|ref|ZP_07035181.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Prevotella oris C735] gi|298576509|gb|EFI48381.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Prevotella oris C735] Length = 288 Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 65/239 (27%), Positives = 107/239 (44%), Gaps = 7/239 (2%) Query: 30 LDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL-AF 88 L D ++ + I R E + ++G F ++ PRPETE+L + A+ Sbjct: 46 LTDEEKVRMETLIERLEAGEPVQYVVGKARFCGRDYMVAPGVLIPRPETEMLCKEVISAY 105 Query: 89 SLP--RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA--VTN 144 + P ++ +R+LD+GTG+G + + L + DIS AL IA+ NA + Sbjct: 106 NRPYCTLQPPAPLRVLDIGTGSGCIAVTLALDLWNCTVTAWDISGDALMIARENAHRLQA 165 Query: 145 GVS-ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL-DGGIDG 202 V+ E D L D + FD+IVSNPPYI + + +P +L D Sbjct: 166 HVNLELQDALNPDETALNASPFDIIVSNPPYICIRESKDMAKHILAHEPHTALFVPDDDP 225 Query: 203 LSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 L YR+IA HL G+ + EI + ++ E + +D G +R+++ Sbjct: 226 LLFYRSIAHYGLSHLKPSGMLAFEINPIYAEETCKMLEHMGYEQIERKEDQYGKERIVI 284 >gi|238898679|ref|YP_002924360.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|229466438|gb|ACQ68212.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 311 Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 45/134 (33%), Positives = 74/134 (55%), Gaps = 2/134 (1%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 ILD+ TG+G + +A + P + VDIS AL +A+ N G+ R + SD F Sbjct: 138 AHILDMCTGSGCIAIACAEAFPEAEVDAVDISRGALAVAECNIEQYGLENRVTPIYSDLF 197 Query: 159 SSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217 + + + +D+IV+NPPY+++ ++ L E F+PR+ L+ G DGL + I R L Sbjct: 198 NDLPRITYDLIVTNPPYVDAKDMNDLPPEFL-FEPRLGLEAGEDGLKLVQRILSSAGRFL 256 Query: 218 NKDGLCSVEIGYNQ 231 + G+ E+G +Q Sbjct: 257 KEKGVLICEVGNSQ 270 >gi|285017772|ref|YP_003375483.1| adenine-specific methylase [Xanthomonas albilineans GPE PC73] gi|283472990|emb|CBA15495.1| putative adenine-specific methylase protein [Xanthomonas albilineans] Length = 312 Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 48/146 (32%), Positives = 78/146 (53%), Gaps = 3/146 (2%) Query: 91 PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150 P + R V R LDL TG+G + +A+ +P ++ VDIS +AL +A N +++ Sbjct: 127 PWLAGRAVSRALDLCTGSGCIAIAMGHYNPNWQVDAVDISDEALALAAENK-QRLLADNV 185 Query: 151 DTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209 ++SD F+ + G +++IV+NPPY+ D L E +P + L G DGL I Sbjct: 186 ALVKSDLFAGLGGRRYELIVTNPPYVTHAETDALPPEYA-HEPELGLRAGEDGLDLALKI 244 Query: 210 ADGVSRHLNKDGLCSVEIGYNQKVDV 235 HL++DGL E+G +++ V Sbjct: 245 LRDAPAHLSEDGLLICEVGESERALV 270 >gi|148272854|ref|YP_001222415.1| putative methyltransferase [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|147830784|emb|CAN01724.1| putative methyltransferase [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 288 Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 53/178 (29%), Positives = 83/178 (46%), Gaps = 4/178 (2%) Query: 54 ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113 +LGW F R+ + F PR TE L +A+ + + D ++DL G+GA+ Sbjct: 74 VLGWAAFAGRRIIVRPGVFVPRRRTERLARAAVDAA----REVDAPTVVDLCCGSGAIAA 129 Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173 + + P D+ A+ A +N + GV+ L +++ G DV+V+N P Sbjct: 130 VVADDVPGAVVHAADVDAVAVACAAANLIPRGVAVHRGDLMEALPTALRGRIDVLVANVP 189 Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231 Y+ S + + E R +P + DGG DGL R +A G L DGL VE+ Q Sbjct: 190 YVPSAGLALMPPEARLHEPEATRDGGADGLDVLRRVARGSGSWLAPDGLLLVEVADEQ 247 >gi|297196470|ref|ZP_06913868.1| methyltransferase [Streptomyces pristinaespiralis ATCC 25486] gi|297153226|gb|EFH32221.1| methyltransferase [Streptomyces pristinaespiralis ATCC 25486] gi|302607841|emb|CBW45752.1| N-methylase [Streptomyces pristinaespiralis] Length = 292 Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 67/235 (28%), Positives = 107/235 (45%), Gaps = 18/235 (7%) Query: 17 LSSHQVIVDP---DSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFE 73 L++H V P D+ L + + R L E RI+G F R L+ F Sbjct: 36 LAAHACQVAPGDLDTCLAGPVPPRFWHYVRRRLTREPAERIVGHAYFMGHRFDLAPGVFV 95 Query: 74 PRPETELLVDSALAFSLPRIEKRDVVR-------ILDLGTGTGAVCLALLKESPFFKGVG 126 P+PETE + A+A R+E +VR ++DL G G + + L + P + +G Sbjct: 96 PKPETEEITRDAIA----RLEA--LVRRGTPAPLVVDLCAGPGTMAVTLARHVPAARVLG 149 Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLE 186 +++S A A+ NA G + D F + G D++V+NPPYI + + E Sbjct: 150 IELSQAAARAARRNARGTG-ARIVQGDARDAFPELSGTVDLVVTNPPYI-PIGLRTSAPE 207 Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 V + DP ++L G +GL R + +R L G+ +E G Q V +F + Sbjct: 208 VLEHDPPLALWAGEEGLGMIRAMERTAARLLAPGGVLLLEHGSYQLASVPALFRA 262 >gi|237812823|ref|YP_002897274.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Burkholderia pseudomallei MSHR346] gi|237502756|gb|ACQ95074.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Burkholderia pseudomallei MSHR346] Length = 307 Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 54/165 (32%), Positives = 83/165 (50%), Gaps = 15/165 (9%) Query: 91 PRIEKRDVV-RILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVS 147 P +E ++V +L+L TG+G CLA+L F VD+S AL +AK N G+ Sbjct: 122 PYVEDPELVGSVLELCTGSG--CLAILAALAFPNASVDAVDLSADALAVAKINRDNYGLD 179 Query: 148 ERFDTLQSDWFSSVEGL--------FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199 E+ D ++ + +DVI++NPPY+ + + L E R +P ++L GG Sbjct: 180 EQIALYHGDLYAPLPQFKWIDPAQRYDVIIANPPYVNAGSMAELPAEYR-HEPEMALAGG 238 Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 DG+ R I R L DG+ VEIG N++ +V F +L Sbjct: 239 ADGMDIVRRIIGEARRWLQDDGVLVVEIG-NERANVEAAFGGLEL 282 >gi|167563203|ref|ZP_02356119.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Burkholderia oklahomensis EO147] gi|167570387|ref|ZP_02363261.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Burkholderia oklahomensis C6786] Length = 307 Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 57/172 (33%), Positives = 85/172 (49%), Gaps = 17/172 (9%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 +L+L TG+G CLA+L F VD+S ALE+AK N G+ E+ D + Sbjct: 133 VLELCTGSG--CLAILAALAFPNASVDAVDLSADALEVAKINRGDYGLDEQIALHHGDLY 190 Query: 159 SSV--------EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210 + + E +DVI++NPPY+ + + L E R +P ++L GG DG+ R I Sbjct: 191 APLPPSRSLDPEQRYDVIITNPPYVNADSMAELPAEYR-HEPEMALAGGADGMDIVRRII 249 Query: 211 DGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262 R L DG+ VEIG N++ +V F L ++ G+D V L Sbjct: 250 GEARRWLKDDGVLVVEIG-NERANVEAAFGGLDLVWLST---SAGDDGVFLI 297 >gi|57167734|ref|ZP_00366874.1| protoporphyrinogen oxidase (hemK) [Campylobacter coli RM2228] gi|57020856|gb|EAL57520.1| protoporphyrinogen oxidase (hemK) [Campylobacter coli RM2228] Length = 266 Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 70/254 (27%), Positives = 115/254 (45%), Gaps = 21/254 (8%) Query: 11 LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKH-ESIHRILGWRDFYNVRLTLSS 69 LC + ++ D +D F ++R K E I DF+ + + Sbjct: 25 LCEYLKKDKAWLFLNQDIQIDHEPYF----ELIRRFKSGEPFEYIFEKADFWGLEFKVKK 80 Query: 70 DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129 PR ++E+L+ L + + IL++G G+G + + L KE K DI Sbjct: 81 GVLIPRYDSEILLSQVLKIC----KNNNFQNILEIGFGSGILSIVLAKELGI-KITACDI 135 Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE-SVIVDCLGLEVR 188 + KAL++A NA + V D D F ++ +D I SNPPYI+ S +D L V+ Sbjct: 136 NPKALQLALENAKLHKVEHLIDFKLCD-FKQIKENYDFIFSNPPYIQNSYPID---LWVQ 191 Query: 189 DFDPRISLDGGIDGLSHYRTIADGVSRHLN-KDGLCSVEIGYNQKVDVVRIFESRKLFLV 247 + +P+ +L GG G Y + + ++ K + E GY+QKV + +I +K F Sbjct: 192 N-EPKEALFGGEKG---YEILEEIITFSFERKVKFLACEFGYDQKVILKQIL-YQKNFQA 246 Query: 248 NAFKDYGGNDRVLL 261 F+D G DR + Sbjct: 247 EFFQDEQGYDRAFV 260 >gi|322514692|ref|ZP_08067720.1| protein-(glutamine-N5) methyltransferase [Actinobacillus ureae ATCC 25976] gi|322119390|gb|EFX91499.1| protein-(glutamine-N5) methyltransferase [Actinobacillus ureae ATCC 25976] Length = 314 Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 47/151 (31%), Positives = 82/151 (54%), Gaps = 7/151 (4%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 RILD+ TG+G + +A + P + VD+S AL++A+ N + V+ R + SD F+ Sbjct: 143 RILDMCTGSGCIAIACAERFPHAEVDAVDLSLDALDVAQINIEHHQVAHRVFPISSDLFT 202 Query: 160 SV-EGLFDVIVSNPPYIESVIVDCLGLEVRDF--DPRISLDGGIDGLSHYRTIADGVSRH 216 + + +D+IV+NPPY++ + LG ++F +P ++L G+DGL + I + Sbjct: 203 DIPQDKYDLIVTNPPYVDQ---EDLGYMPQEFHHEPELALGSGVDGLDITKRILAEAPNY 259 Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRKLFLV 247 L +G+ E+G N V ++ F S V Sbjct: 260 LADNGVLVCEVG-NSMVHLMEQFPSVPFHWV 289 >gi|29827834|ref|NP_822468.1| methytransferase [Streptomyces avermitilis MA-4680] gi|29604935|dbj|BAC69003.1| putative methytransferase [Streptomyces avermitilis MA-4680] Length = 272 Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 60/189 (31%), Positives = 88/189 (46%), Gaps = 6/189 (3%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110 + +LGW F+ +R+T+ F PR TE LVD A++ + R+V ++DL G+GA Sbjct: 56 LEHVLGWAGFHGLRITVDPGVFVPRRRTEFLVDLAVSLA------REVSVVVDLCCGSGA 109 Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170 V AL + DI A+ A+ N G L + + G D++ + Sbjct: 110 VAAALAASLDGPELHAADIDPAAVRCARRNLAACGGHVHEGDLFTALPGHLRGRVDILAA 169 Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230 N PY+ + V L E RD +P ++LDGG DGL R + SR L+ G VE Sbjct: 170 NVPYVPTDEVGLLPPEARDHEPLVALDGGSDGLDILRRVTAEASRWLSPGGSLLVETSER 229 Query: 231 QKVDVVRIF 239 Q V F Sbjct: 230 QASLAVETF 238 >gi|167586839|ref|ZP_02379227.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Burkholderia ubonensis Bu] Length = 304 Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 57/179 (31%), Positives = 86/179 (48%), Gaps = 17/179 (9%) Query: 94 EKRDVVRILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVSERFD 151 + V +L+L TG+G CLA+L S F VD+S KALE+A+ N G+ +R Sbjct: 124 DPEQVGAVLELCTGSG--CLAILAASAFPNAEIDAVDLSGKALEVAEINVRDYGLEDRIS 181 Query: 152 TLQSDWFSSVE--------GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203 + D ++ + +DVI++NPPY+ + + L E R +P ++L GG DG+ Sbjct: 182 LHRGDLYAPLPLFRSSEPGARYDVILTNPPYVNAASMAALPPEYR-HEPEMALAGGEDGM 240 Query: 204 SHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262 R I L+ DG+ VEIG N++ V F +L G D V L Sbjct: 241 DVVRRIIGEARNWLHDDGVLVVEIG-NEREHVEAAFGGLEL---TWLPTSAGEDSVFLI 295 >gi|328880846|emb|CCA54085.1| Methylase of polypeptide chain release factors [Streptomyces venezuelae ATCC 10712] Length = 260 Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 51/183 (27%), Positives = 80/183 (43%), Gaps = 6/183 (3%) Query: 50 SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109 + ++GW F +R+ + + F PR TE L++ A+ + P +DL G+G Sbjct: 51 PLEHVVGWAGFAGLRVEVDAGVFVPRRRTEFLMEHAVELARPG------AVCVDLCCGSG 104 Query: 110 AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIV 169 A LL + DI A+ A+ N G L + + G +++V Sbjct: 105 AAGAVLLDRVEGAEVHASDIEPAAVRCARRNVEPRGGRVYEGDLFAPLPPELRGRVEILV 164 Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY 229 +N PY+ + + L E RD +P ++LDGG DGL R +A G L G VE Sbjct: 165 ANVPYVPTEDIGLLPPEARDHEPLVTLDGGPDGLDVLRRVAAGAPEWLAPGGHLLVETSE 224 Query: 230 NQK 232 Q Sbjct: 225 RQA 227 >gi|330445416|ref|ZP_08309068.1| -(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328489607|dbj|GAA03565.1| -(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 310 Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 45/134 (33%), Positives = 73/134 (54%), Gaps = 2/134 (1%) Query: 96 RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155 ++ RI+DL TG+G + +A P + VDIS AL +A+ N +G+ ++ L+S Sbjct: 131 QEPTRIMDLCTGSGCIGIACAHMFPEAEVDIVDISPDALAVAEQNIADHGLEQQVIPLRS 190 Query: 156 DWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214 D V + +D++V+NPPY++ +D L E R +P + L G DGL R I Sbjct: 191 DLLRDVPKDKYDLLVTNPPYVDQEDMDSLPDEFR-HEPELGLAAGSDGLKLVRRILANAP 249 Query: 215 RHLNKDGLCSVEIG 228 +L +DG+ E+G Sbjct: 250 DYLKEDGILICEVG 263 >gi|182413246|ref|YP_001818312.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Opitutus terrae PB90-1] gi|177840460|gb|ACB74712.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Opitutus terrae PB90-1] Length = 306 Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 55/156 (35%), Positives = 81/156 (51%), Gaps = 7/156 (4%) Query: 81 LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAK 138 L+ AL LP +R + R +D+ TG+G CLA+L F + V +D+S AL++A Sbjct: 123 LIPGALRDWLPDHGRR-LKRAVDVCTGSG--CLAILLAHEFPRAVVDAIDVSTPALDVAV 179 Query: 139 SNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197 N + + +R QSD F V +D+I+SNPPY S VD E +PR++ D Sbjct: 180 INVREHRLGQRVHLFQSDVFDEVPAARYDIILSNPPYEPSRHVDRQAPEF-AAEPRLAHD 238 Query: 198 GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233 GG DGL R + L G+ +E+G +KV Sbjct: 239 GGPDGLMIIRKLLHQAKGRLAPHGIVVIEVGGLRKV 274 >gi|148689236|gb|EDL21183.1| HemK methyltransferase family member 1, isoform CRA_b [Mus musculus] Length = 276 Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 71/233 (30%), Positives = 109/233 (46%), Gaps = 23/233 (9%) Query: 46 LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPR---IEKRDVVRIL 102 L+ + ILG DF + L + F PRPETE LV+ L R + +D IL Sbjct: 42 LQRMPVQYILGEWDFQGLSLKMVPPVFIPRPETEELVEWVLEEVARRPHAVRAQDGPLIL 101 Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162 ++G G+GA+ L+LL + P + V VD A+ + NA + +R + D S E Sbjct: 102 EVGCGSGAITLSLLSQLPKSRVVAVDKEEAAVSLTHENARRLQLQDRIRIICLDITS--E 159 Query: 163 GL---------FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL---SHYRTIA 210 G D++VSNPPYI ++ L E+ ++ ++LDGG +G+ +H T+A Sbjct: 160 GCCTHLLPWSPLDLVVSNPPYIFRKDMEQLAPEICSYEDLVALDGGDEGMDIITHILTLA 219 Query: 211 DGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK---LFLVNAFKDYGGNDRVL 260 + LN G +E+ V +S L LV +D+ G R L Sbjct: 220 PQL---LNASGSIFLEVDPRHPELVSSWLQSHPDLHLSLVGVREDFCGRPRFL 269 >gi|326795497|ref|YP_004313317.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Marinomonas mediterranea MMB-1] gi|326546261|gb|ADZ91481.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Marinomonas mediterranea MMB-1] Length = 300 Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 63/239 (26%), Positives = 114/239 (47%), Gaps = 18/239 (7%) Query: 23 IVDPDSVLDDRQRFF-LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELL 81 ++D +D+R+R L ++ R K E + +LG F + ++ DT PR L Sbjct: 61 MLDSRLTIDERKRIVKLVHS--RISKREPLPYLLGKAWFMGLDFKVTKDTLIPRSPIMTL 118 Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD---ISCKALEIAK 138 +++ LP + +LD+ TG+G + +A + F+ VD IS AL++A+ Sbjct: 119 IENEFQPWLPHYP----MNVLDMCTGSGCIGIA---TALAFEDAEVDLSDISSAALDVAR 171 Query: 139 SNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197 N + +R ++SD F + G +D+IV NPPY+++ E + +P+++L Sbjct: 172 YNVSDYDLDDRVSVIESDMFDGLAGNKYDLIVCNPPYVDAQDYSSAPAEFHN-EPQLALT 230 Query: 198 GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGN 256 G DGL R + +L+ G+ E+G N +V + + + V + GGN Sbjct: 231 SGDDGLDFTRRFLSQAANYLHDSGIVVYEVG-NSEVALQAAYPDTEFMWVEL--EQGGN 286 >gi|161524417|ref|YP_001579429.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Burkholderia multivorans ATCC 17616] gi|189350828|ref|YP_001946456.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Burkholderia multivorans ATCC 17616] gi|221198337|ref|ZP_03571383.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Burkholderia multivorans CGD2M] gi|221208276|ref|ZP_03581280.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Burkholderia multivorans CGD2] gi|221215443|ref|ZP_03588407.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Burkholderia multivorans CGD1] gi|160341846|gb|ABX14932.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Burkholderia multivorans ATCC 17616] gi|189334850|dbj|BAG43920.1| putative adenine-specific DNA-methyltransferase [Burkholderia multivorans ATCC 17616] gi|221164627|gb|EED97109.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Burkholderia multivorans CGD1] gi|221171924|gb|EEE04367.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Burkholderia multivorans CGD2] gi|221182269|gb|EEE14670.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Burkholderia multivorans CGD2M] Length = 302 Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 56/178 (31%), Positives = 86/178 (48%), Gaps = 16/178 (8%) Query: 94 EKRDVVRILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVSERFD 151 + V +L+L TG+G CLA+L S F VD+S ALE+A+ N G+ +R Sbjct: 123 DPEQVGAVLELCTGSG--CLAILAASAFPNAEIDAVDLSADALEVAQINVRDYGLEDRIT 180 Query: 152 TLQSDWFSSVEGL-------FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204 + D ++ + +DVI++NPPY+ + + L E R +P ++L GG DG+ Sbjct: 181 LHRGDLYAPLPAFRAQPDARYDVILTNPPYVNAASMAKLPPEYR-HEPEMALAGGDDGMD 239 Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262 R I L+ DG+ VEIG N++ V F +L G+D V L Sbjct: 240 IVRRIVAEAHNWLHDDGVLVVEIG-NEREHVEAAFGGLEL---TWLPTSAGDDNVFLI 293 >gi|261333113|emb|CBH16108.1| hypothetical protein, conserved [Trypanosoma brucei gambiense DAL972] Length = 420 Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 51/156 (32%), Positives = 74/156 (47%), Gaps = 28/156 (17%) Query: 48 HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRI-EKRDVVRILDLGT 106 H+ + I+G + FY + S PRPETE+ + L +I E +R+LD+ Sbjct: 160 HKPLAYIIGHQPFYGCDIRCSPPLLCPRPETEMWTHWLVRTWLSKIPETTQPLRVLDMCC 219 Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV-SERFDTLQSDWFSSV---- 161 GTG V +A+ K P + VDI +A+ ++ NA NG+ + RF TL+SD F S Sbjct: 220 GTGCVGIAIAKHVPSAQVTAVDILDEAIGASEENAKLNGLEASRFCTLKSDMFESFLVSN 279 Query: 162 ----------------------EGLFDVIVSNPPYI 175 G FD+IVSNPPY+ Sbjct: 280 SGSLTGEDTKLDLKKKEPAAEHAGSFDIIVSNPPYV 315 >gi|251792179|ref|YP_003006899.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Aggregatibacter aphrophilus NJ8700] gi|247533566|gb|ACS96812.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Aggregatibacter aphrophilus NJ8700] Length = 316 Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 46/141 (32%), Positives = 77/141 (54%), Gaps = 3/141 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 RILD+ TG+G + +A ++ P VD+S AL +A+ N + +S R +QSD FS Sbjct: 145 RILDMCTGSGCIAIACAEQFPQADVDAVDLSIDALNVAEMNIERHNLSHRVFPIQSDLFS 204 Query: 160 S-VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 +E +D+IV+NPPY++ + + E ++P ++L G DGL + I +L Sbjct: 205 HLLEEQYDLIVANPPYVDLEDLSDMPEEFH-YEPEMALGSGNDGLDITKEILRMAPNYLT 263 Query: 219 KDGLCSVEIGYNQKVDVVRIF 239 +GL E+G N V ++ + Sbjct: 264 DNGLLICEVG-NSMVHLIEQY 283 >gi|39934242|ref|NP_946518.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Rhodopseudomonas palustris CGA009] gi|39648090|emb|CAE26610.1| possible adenine-specific methylase [Rhodopseudomonas palustris CGA009] Length = 340 Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 47/134 (35%), Positives = 71/134 (52%), Gaps = 6/134 (4%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVSERFDTLQS 155 + R+LDL TG+G CLA+L F VD+S AL +A N + + +R Sbjct: 175 IERVLDLCTGSG--CLAILAAYAFPNATVDAVDLSKDALAVATRNVAEHRLDDRVSLYHG 232 Query: 156 DWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214 D F + + +D+I++NPPY+++ + L E R +P ++ DGG DGL+ R I Sbjct: 233 DLFGPLGDERYDLIITNPPYVDADGMASLPAECR-AEPAMAFDGGDDGLTIIRRILAEAK 291 Query: 215 RHLNKDGLCSVEIG 228 HLN DG E+G Sbjct: 292 HHLNPDGGLLCEVG 305 >gi|71748306|ref|XP_823208.1| hypothetical protein [Trypanosoma brucei TREU927] gi|70832876|gb|EAN78380.1| hypothetical protein, conserved [Trypanosoma brucei] Length = 420 Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 51/156 (32%), Positives = 74/156 (47%), Gaps = 28/156 (17%) Query: 48 HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRI-EKRDVVRILDLGT 106 H+ + I+G + FY + S PRPETE+ + L +I E +R+LD+ Sbjct: 160 HKPLAYIIGHQPFYGCDIRCSPPLLCPRPETEMWTHWLVRTWLSKIPETTQPLRVLDMCC 219 Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV-SERFDTLQSDWFSSV---- 161 GTG V +A+ K P + VDI +A+ ++ NA NG+ + RF TL+SD F S Sbjct: 220 GTGCVGIAIAKHVPSAQVTAVDILDEAIGASEENAKLNGLEASRFCTLKSDMFESFLVSN 279 Query: 162 ----------------------EGLFDVIVSNPPYI 175 G FD+IVSNPPY+ Sbjct: 280 SGSLTGEDTKLDLKKKEPAAEHAGSFDIIVSNPPYV 315 >gi|261493622|ref|ZP_05990142.1| peptide chain release factor methyltransferase [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261495460|ref|ZP_05991908.1| peptide chain release factor methyltransferase [Mannheimia haemolytica serotype A2 str. OVINE] gi|261308965|gb|EEY10220.1| peptide chain release factor methyltransferase [Mannheimia haemolytica serotype A2 str. OVINE] gi|261310804|gb|EEY11987.1| peptide chain release factor methyltransferase [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 314 Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 51/152 (33%), Positives = 85/152 (55%), Gaps = 7/152 (4%) Query: 93 IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152 I K + RILD+ TG+G + +A + P + VD+S AL++A+ N + VS R Sbjct: 136 IIKNEPHRILDMCTGSGCIAIACAERFPEAEVDAVDLSLDALDVAQINIERHQVSHRVFP 195 Query: 153 LQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDF--DPRISLDGGIDGLSHYRTI 209 + SD F+++ + +D+IV+NPPY++ + LG +F +P ++L G DGL + I Sbjct: 196 ICSDLFNNLPQDKYDLIVTNPPYVDE---EDLGDMPEEFHHEPALALGSGKDGLDLTKRI 252 Query: 210 ADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 + +LN DG+ E+G N V ++ F S Sbjct: 253 LAQAADYLNDDGVLVCEVG-NSMVHLIEQFPS 283 >gi|260899980|ref|ZP_05908375.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Vibrio parahaemolyticus AQ4037] gi|308107260|gb|EFO44800.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Vibrio parahaemolyticus AQ4037] Length = 310 Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 42/134 (31%), Positives = 72/134 (53%), Gaps = 2/134 (1%) Query: 96 RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155 + RI+DL TG+G + +A P + +DIS AL++A+ N +G+ ++ ++S Sbjct: 131 EEPTRIMDLCTGSGCIAIACAHAFPEAEVDAIDISADALQVAEQNIQDHGMEQQVFPIRS 190 Query: 156 DWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214 D F + + +++IVSNPPY++ ++ L E +P + L G DGL R I Sbjct: 191 DLFRDLPKEKYNLIVSNPPYVDEEDMNSLPQEFT-HEPELGLAAGTDGLKLVRRILANAP 249 Query: 215 RHLNKDGLCSVEIG 228 +L DG+ E+G Sbjct: 250 DYLTDDGILICEVG 263 >gi|294463809|gb|ADE77429.1| unknown [Picea sitchensis] Length = 400 Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 57/197 (28%), Positives = 87/197 (44%), Gaps = 5/197 (2%) Query: 44 RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103 R K I+G + +V L++ PRP TE L++ A ++ D Sbjct: 172 RVEKRRPFQYIVGCSHWRDVVLSVQEGVLIPRPVTEELIEIAQK-AIATDGSLATGVWAD 230 Query: 104 LGTGTGAVCLALLKE-SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF---S 159 LGTG+GA+ + L + P V VD+S AL IA+ N + R + Q WF Sbjct: 231 LGTGSGALAIGLAQLLDPEGHVVAVDLSHVALSIARYNVQRYELQARVEVRQGSWFLPLQ 290 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 V G ++SNPPYI + L EV +PR++L+GG +G+ + G L Sbjct: 291 DVNGKLAGVLSNPPYIPEDQIPGLQAEVGKHEPRLALNGGQEGIEDLLHLCRGCISALRS 350 Query: 220 DGLCSVEIGYNQKVDVV 236 G E ++ D + Sbjct: 351 GGFLGFETNGERQADAL 367 >gi|283956131|ref|ZP_06373618.1| putative DNA methylase [Campylobacter jejuni subsp. jejuni 1336] gi|283792451|gb|EFC31233.1| putative DNA methylase [Campylobacter jejuni subsp. jejuni 1336] Length = 271 Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 69/254 (27%), Positives = 115/254 (45%), Gaps = 21/254 (8%) Query: 11 LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKH-ESIHRILGWRDFYNVRLTLSS 69 LC + ++ D +D + F ++R K E I DF+ + + Sbjct: 25 LCEYLKKDKAWLFLNQDIEIDHKPYF----ELIRRFKSGEPFEYIFEKVDFWGLEFKIKK 80 Query: 70 DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129 PR ++E+L+ L +K +IL++G G+G + + L KE K DI Sbjct: 81 GVLIPRYDSEILLFQILNLC----KKNTFNKILEIGFGSGILSIVLAKELGL-KITACDI 135 Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE-SVIVDCLGLEVR 188 + KALE+A NA + V D + F ++ +D I SNPPYI+ S +D + Sbjct: 136 NPKALELALENAKLHKVDHLIDFKLCN-FKQIKENYDFIFSNPPYIKNSYPIDIWVQK-- 192 Query: 189 DFDPRISLDGGIDGLSHYRTIADGVSRHLNKD-GLCSVEIGYNQKVDVVRIFESRKLFLV 247 +P+ +L GG G Y + + + L+K + E GY+QK + +I F+V Sbjct: 193 --EPKEALFGGEKG---YEILEEIIHFSLDKKVKFLACEFGYDQKEILEKILYQNN-FIV 246 Query: 248 NAFKDYGGNDRVLL 261 + FKD G +R + Sbjct: 247 DFFKDEQGYNRAFI 260 >gi|281424787|ref|ZP_06255700.1| protein-(glutamine-N5) methyltransferase [Prevotella oris F0302] gi|281401157|gb|EFB31988.1| protein-(glutamine-N5) methyltransferase [Prevotella oris F0302] Length = 288 Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 64/239 (26%), Positives = 110/239 (46%), Gaps = 7/239 (2%) Query: 30 LDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALA-F 88 L D ++ + I R E + ++G F ++ PRPETE+L ++ + Sbjct: 46 LTDDEKARMETLIERLEAGEPVQYVVGKARFCGRDYMVAPGVLIPRPETEMLCKEVISTY 105 Query: 89 SLP--RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA--VTN 144 + P ++ + +R+LD+GTG+G + + L + DIS +L IA+ NA + Sbjct: 106 NKPYCALQPPEPLRVLDIGTGSGCIAVTLALDLWNCTVTAWDISGDSLIIARENAHRLQA 165 Query: 145 GVS-ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL-DGGIDG 202 V+ E D L D + FD+IVSNPPYI + + V +P +L D Sbjct: 166 HVNLELQDALNPDETALNAPPFDIIVSNPPYICTRESKDMAKHVLAHEPHTALFVPDDDP 225 Query: 203 LSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 L YR+IA HL G+ + EI + ++ E + + +D G +R+++ Sbjct: 226 LLFYRSIAHYGLSHLKPSGMLAFEINPIYAEETCKMLEHMGYEQIESKEDQYGKERIVI 284 >gi|254360980|ref|ZP_04977125.1| peptide chain release factor methyltransferase [Mannheimia haemolytica PHL213] gi|153092466|gb|EDN73521.1| peptide chain release factor methyltransferase [Mannheimia haemolytica PHL213] Length = 314 Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 51/152 (33%), Positives = 85/152 (55%), Gaps = 7/152 (4%) Query: 93 IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152 I K + RILD+ TG+G + +A + P + VD+S AL++A+ N + VS R Sbjct: 136 IIKNEPHRILDMCTGSGCIAIACAERFPEAEVDAVDLSLDALDVAQINIERHQVSHRVFP 195 Query: 153 LQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDF--DPRISLDGGIDGLSHYRTI 209 + SD F+++ + +D+IV+NPPY++ + LG +F +P ++L G DGL + I Sbjct: 196 ICSDLFNNLPQDKYDLIVTNPPYVDE---EDLGDMPEEFHHEPALALGSGKDGLDLTKRI 252 Query: 210 ADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 + +LN DG+ E+G N V ++ F S Sbjct: 253 LAQAADYLNDDGVLVCEVG-NSMVHLIEQFPS 283 >gi|332283976|ref|YP_004415887.1| heme biosynthesis protein [Pusillimonas sp. T7-7] gi|330427929|gb|AEC19263.1| heme biosynthesis protein [Pusillimonas sp. T7-7] Length = 298 Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 62/195 (31%), Positives = 94/195 (48%), Gaps = 14/195 (7%) Query: 74 PRPETELLVDSALAFSLPRI-EKRDVVRILDLGTGTGAVCLALLKESPFFKGV--GVDIS 130 PR L+D LA P + + DV +LDL TG+G CLA+L F VD+S Sbjct: 109 PRSPISELLDDGLA---PWVADADDVDFVLDLCTGSG--CLAVLAALAFPNAQVDAVDLS 163 Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRD 189 ALE+A N +G+ R T SD F + + +I+ NPPY+ + ++ L E R Sbjct: 164 EHALEVADENIELSGLDGRITTHCSDLFEQLPDCEYKLIICNPPYVNNHSMEHLPQEYR- 222 Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249 +P ++L GG DG+ R + + DGL +EIG+ + + E ++L Sbjct: 223 HEPTMALAGGDDGMDLIRRLLQQAPAFMAPDGLLVLEIGHEYQNFLAAFPELDPVWLSTE 282 Query: 250 FKDYGGNDRVLLFCR 264 D D++LL R Sbjct: 283 NTD----DQILLLTR 293 >gi|28898977|ref|NP_798582.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Vibrio parahaemolyticus RIMD 2210633] gi|153836932|ref|ZP_01989599.1| hypothetical adenine-specific methylase YfcB [Vibrio parahaemolyticus AQ3810] gi|260365277|ref|ZP_05777834.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Vibrio parahaemolyticus K5030] gi|260878827|ref|ZP_05891182.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Vibrio parahaemolyticus AN-5034] gi|260896251|ref|ZP_05904747.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Vibrio parahaemolyticus Peru-466] gi|28807196|dbj|BAC60466.1| putative adenine-specific methylase [Vibrio parahaemolyticus RIMD 2210633] gi|149749705|gb|EDM60450.1| hypothetical adenine-specific methylase YfcB [Vibrio parahaemolyticus AQ3810] gi|308088797|gb|EFO38492.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Vibrio parahaemolyticus Peru-466] gi|308094294|gb|EFO43989.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Vibrio parahaemolyticus AN-5034] gi|308115430|gb|EFO52970.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Vibrio parahaemolyticus K5030] gi|328474485|gb|EGF45290.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Vibrio parahaemolyticus 10329] Length = 310 Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 42/134 (31%), Positives = 72/134 (53%), Gaps = 2/134 (1%) Query: 96 RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155 + RI+DL TG+G + +A P + +DIS AL++A+ N +G+ ++ ++S Sbjct: 131 EEPTRIMDLCTGSGCIAIACAHAFPEAEVDAIDISADALQVAEQNIQDHGMEQQVFPIRS 190 Query: 156 DWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214 D F + + +++IVSNPPY++ ++ L E +P + L G DGL R I Sbjct: 191 DLFRDLPKEKYNLIVSNPPYVDEEDMNSLPQEFT-HEPELGLAAGTDGLKLVRRILANAP 249 Query: 215 RHLNKDGLCSVEIG 228 +L DG+ E+G Sbjct: 250 DYLTDDGILICEVG 263 >gi|332298738|ref|YP_004440660.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Treponema brennaborense DSM 12168] gi|332181841|gb|AEE17529.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Treponema brennaborense DSM 12168] Length = 346 Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 73/297 (24%), Positives = 119/297 (40%), Gaps = 45/297 (15%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D L R+ G+ + P++VL + Q +A+ + I G ++F+ + Sbjct: 50 DCDCILSRLLGVPRSYLFSHPETVLTEPQCAAFFDAVRLRRTGLPVAYITGHKEFWALDF 109 Query: 66 TLSSDTFEPRPETELLVDSALA----------------------FSLPRIEKRDVVRILD 103 ++ P+P+TELLV+ AL F+ P VRI D Sbjct: 110 LVTRAVLIPKPDTELLVERALETVARIVGANRPAPPAEGDESGDFAAPPCAS---VRIAD 166 Query: 104 LGTGTGAVCLALLKESPF-----FKGVGVDISCKALEIAKSNA---VTNGVSERFDTLQS 155 + TG+G V +++L P+ ++ DIS AL +A+ NA + + D + Sbjct: 167 VCTGSGCVAVSILHTLPYRADIRYEMYATDISPAALSVARENAKRLLKAPAAYTLDFFEG 226 Query: 156 DWFS-----SVEGL--FDVIVSNPPYIESVIVDCLGLEVRDFDPRISL----DGGIDGLS 204 D +V G FD+IVSNPPY+ + + L + R +P ++L DG DG Sbjct: 227 DLLEPLLSDAVSGKESFDLIVSNPPYVPADVTARLLADGRS-EPELALNGDCDGTTDGTG 285 Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 R + L + G +E G + + D GG RV L Sbjct: 286 LLRRLIGQARWALKRGGFFLIETGEYNAAAAASYLAKNGFTDIVTYTDLGGMPRVTL 342 >gi|270262881|ref|ZP_06191152.1| hypothetical protein SOD_c05060 [Serratia odorifera 4Rx13] gi|270043565|gb|EFA16658.1| hypothetical protein SOD_c05060 [Serratia odorifera 4Rx13] Length = 324 Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 55/159 (34%), Positives = 81/159 (50%), Gaps = 12/159 (7%) Query: 74 PR-PETELLVD--SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130 PR P EL+ D SAL PR ILD+ TG+G + +A P + VDIS Sbjct: 127 PRSPIGELINDHFSALIPHPPR-------HILDMCTGSGCIAIACGYAFPEAEVDAVDIS 179 Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRD 189 L + + N +GV + ++SD F V + +D+IV+NPPY+++ + L E R Sbjct: 180 SDVLAVTERNIQAHGVEHQVIPIRSDLFRDVPAIQYDLIVTNPPYVDAEDMSDLPQEFR- 238 Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228 F+P + L G DGL R I +L+ DG+ E+G Sbjct: 239 FEPELGLAAGSDGLKLVRRILACAPDYLSDDGVLICEVG 277 >gi|150376492|ref|YP_001313088.1| HemK family modification methylase [Sinorhizobium medicae WSM419] gi|150031039|gb|ABR63155.1| modification methylase, HemK family [Sinorhizobium medicae WSM419] Length = 280 Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 60/207 (28%), Positives = 94/207 (45%), Gaps = 11/207 (5%) Query: 60 FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119 F ++ L L+ PR ETELL +A A E ++D+ G+G + L + E Sbjct: 60 FMDIDLELAPGVLVPREETELLGRTAAAILR---EAARPATVVDMCCGSGNLALGIAAEV 116 Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGL---FDVIVSNPPY 174 P + G D++ + +A+ N + +R Q D F+++ EGL D+IV NPPY Sbjct: 117 PLARVWGADLTDSTVALARRNVERLALGDRVFVRQGDLFAALAGEGLEEAVDMIVCNPPY 176 Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLS-HYRTIADGVSRHLNKDGLCSVEIGYNQKV 233 I + ++ + +PR + DGG G+S H R I + V+ L G E G Q Sbjct: 177 ISTSRLESDSAHLLASEPREAFDGGPYGISIHQRLIREAVA-FLKPGGWLLFEFGEGQDR 235 Query: 234 DVVRIFESRKLFLVNAFK-DYGGNDRV 259 + K + +F D G RV Sbjct: 236 QTAALLARTKAYDAVSFATDAAGKPRV 262 >gi|254358090|ref|ZP_04974363.1| methyltransferase, HemK family protein [Burkholderia mallei 2002721280] gi|148027217|gb|EDK85238.1| methyltransferase, HemK family protein [Burkholderia mallei 2002721280] Length = 307 Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 52/154 (33%), Positives = 77/154 (50%), Gaps = 14/154 (9%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 +L+L TG+G CLA+L F VD+S AL +AK N G+ ER D + Sbjct: 133 VLELCTGSG--CLAILAALAFPNASVDAVDLSADALAVAKINRDNYGLDERIALYHGDLY 190 Query: 159 SSVEGL--------FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210 + + +DVI++NPPY+ + + L E R +P ++L GG DG+ R I Sbjct: 191 APLPQFKWIDPAQRYDVIIANPPYVNAGSMAELPAEYR-HEPEMALAGGADGMDIVRRII 249 Query: 211 DGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 R L DG+ VEIG N++ +V F +L Sbjct: 250 GEARRWLQDDGVLVVEIG-NERANVEAAFGGLEL 282 >gi|152996265|ref|YP_001341100.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Marinomonas sp. MWYL1] gi|150837189|gb|ABR71165.1| modification methylase, HemK family [Marinomonas sp. MWYL1] Length = 304 Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 57/201 (28%), Positives = 95/201 (47%), Gaps = 12/201 (5%) Query: 32 DRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLP 91 + ++ L R K E + +LG F + ++ DT PR L++S L Sbjct: 69 NEKKHILKLVQTRITKREPLPYLLGEAWFMGLPFKVTKDTLIPRSPIISLLESEFTPWL- 127 Query: 92 RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS---CKALEIAKSNAVTNGVSE 148 K + ILD+ TG+G + +A + F+ VDIS AL++A N V + V + Sbjct: 128 ---KNYPLNILDMCTGSGCLGIA---AALVFEDAEVDISDISEAALDVANENIVRHQVED 181 Query: 149 RFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207 R + SD F + G +D+I+ NPPY+++ E + +P ++L G DGL+ Sbjct: 182 RVHAIHSDMFKGLSGKRYDLIICNPPYVDADDFHNAPAEFHN-EPELALTSGEDGLNFTH 240 Query: 208 TIADGVSRHLNKDGLCSVEIG 228 V+ +L DG+ E+G Sbjct: 241 EFLTQVAHYLQDDGILVYEVG 261 >gi|221632125|ref|YP_002521346.1| methyltransferase, HemK family [Thermomicrobium roseum DSM 5159] gi|221156910|gb|ACM06037.1| methyltransferase, HemK family [Thermomicrobium roseum DSM 5159] Length = 283 Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 67/232 (28%), Positives = 106/232 (45%), Gaps = 18/232 (7%) Query: 6 DSHSFLCRVTGLSSHQVIVD-PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 D+ LC V G+ ++ P+ +RF+ + R + E + + G R+FY + Sbjct: 26 DAEVLLCHVLGIDRAELYRRLPEQPPGTLERFW--ELVARRERGEPVAYLTGHREFYGLD 83 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKR-DVVRILDLGTGTGAVCLALL----KES 119 ++ +T PRPETE LV ++ R+ R D R +D+GTG GA+ ++L K+ Sbjct: 84 FLVTPETLIPRPETEFLV----TWAAERLRARHDEPRCVDVGTGCGAIIVSLAVTLGKQH 139 Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179 P VG D S AL++A+ N R + D S G D++V+N PY+ Sbjct: 140 PAVL-VGSDRSLAALQVARVNR-ERLAPGRVHLVCGDLLSWCRGPLDLVVANLPYLRPDQ 197 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231 GL ++P +L +G Y + V+ L G C VEI Q Sbjct: 198 WHP-GLA---WEPAEALFAPDEGFGWYARLLPQVATLLRSGGGCIVEIDPAQ 245 >gi|331004960|ref|ZP_08328371.1| Site-specific DNA-methyltransferase [gamma proteobacterium IMCC1989] gi|330421236|gb|EGG95491.1| Site-specific DNA-methyltransferase [gamma proteobacterium IMCC1989] Length = 314 Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 45/131 (34%), Positives = 73/131 (55%), Gaps = 2/131 (1%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 +RILD+ TG G + +A P DIS +AL +A+ N + + +R +QSD F Sbjct: 142 LRILDMCTGCGCIGIATALHMPEALVDVSDISTEALLVAQDNIQRHKLQDRVTAIQSDVF 201 Query: 159 SSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217 S + +D+IV+NPPY++ +D + E + +P I+L G DGL R + + +L Sbjct: 202 SGLPNSTYDLIVTNPPYVDKADIDSMPAEYQA-EPAIALGSGDDGLDITRRLLKEAASYL 260 Query: 218 NKDGLCSVEIG 228 N +G+ VE+G Sbjct: 261 NGNGVMIVEVG 271 >gi|68052371|sp|Q921L7|HEMK1_MOUSE RecName: Full=HemK methyltransferase family member 1 gi|15030311|gb|AAH11431.1| HemK methyltransferase family member 1 [Mus musculus] gi|19354454|gb|AAH24428.1| HemK methyltransferase family member 1 [Mus musculus] gi|148689235|gb|EDL21182.1| HemK methyltransferase family member 1, isoform CRA_a [Mus musculus] Length = 340 Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 71/233 (30%), Positives = 109/233 (46%), Gaps = 23/233 (9%) Query: 46 LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPR---IEKRDVVRIL 102 L+ + ILG DF + L + F PRPETE LV+ L R + +D IL Sbjct: 106 LQRMPVQYILGEWDFQGLSLKMVPPVFIPRPETEELVEWVLEEVARRPHAVRAQDGPLIL 165 Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162 ++G G+GA+ L+LL + P + V VD A+ + NA + +R + D S E Sbjct: 166 EVGCGSGAITLSLLSQLPKSRVVAVDKEEAAVSLTHENARRLQLQDRIRIICLDITS--E 223 Query: 163 GL---------FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL---SHYRTIA 210 G D++VSNPPYI ++ L E+ ++ ++LDGG +G+ +H T+A Sbjct: 224 GCCTHLLPWSPLDLVVSNPPYIFRKDMEQLAPEICSYEDLVALDGGDEGMDIITHILTLA 283 Query: 211 DGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK---LFLVNAFKDYGGNDRVL 260 + LN G +E+ V +S L LV +D+ G R L Sbjct: 284 PQL---LNASGSIFLEVDPRHPELVSSWLQSHPDLHLSLVGVREDFCGRPRFL 333 >gi|84387710|ref|ZP_00990726.1| putative adenine-specific methylase [Vibrio splendidus 12B01] gi|84377393|gb|EAP94260.1| putative adenine-specific methylase [Vibrio splendidus 12B01] Length = 310 Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 42/134 (31%), Positives = 72/134 (53%), Gaps = 2/134 (1%) Query: 96 RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155 + RI+DL TG+G + +A P + +DIS AL++A+ N +G+ ++ ++S Sbjct: 131 EEPTRIMDLCTGSGCIAIACAHAFPDAEVDAIDISTDALQVAEQNVQDHGMEQQVFPIRS 190 Query: 156 DWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214 D F + + +++IVSNPPY++ ++ L E +P + L G DGL R I Sbjct: 191 DLFRDLPKEKYNLIVSNPPYVDEEDMNSLPEEFT-HEPELGLAAGTDGLKLVRRILANAP 249 Query: 215 RHLNKDGLCSVEIG 228 +L DG+ E+G Sbjct: 250 NYLTDDGILICEVG 263 >gi|256825642|ref|YP_003149602.1| methylase of HemK family [Kytococcus sedentarius DSM 20547] gi|256689035|gb|ACV06837.1| putative methylase of HemK family [Kytococcus sedentarius DSM 20547] Length = 308 Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 77/251 (30%), Positives = 104/251 (41%), Gaps = 28/251 (11%) Query: 31 DDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSL 90 DD +R + R E + + G F + L + F PRPETELLV+ A L Sbjct: 57 DDPRRERFEAGVQRREAREPLQHVTGTAWFAGLGLEVGPGVFVPRPETELLVELAAERVL 116 Query: 91 -------PRIEKRDVVRILDLGTGTGAVCLALLKE----------SPFFKGVGVDISCKA 133 P + V ++DL TG+GAV L L + P V+ +A Sbjct: 117 ALAGGAGPEAQ----VEVVDLCTGSGAVVLGLARRLADRAEAGQAVPTATLRAVEQDPRA 172 Query: 134 LEIAKSNAVTNGVSERFDTLQSDW---FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDF 190 E A+ N GV+ D SD F EGL DV+VSNPPY+ + L E R+ Sbjct: 173 AEYAERNIEAVGVT--VDLRVSDAREEFVDREGLVDVVVSNPPYVPEG-AEPLEPEAREH 229 Query: 191 DPRISLDGG-IDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249 DPR +L GG DGL +A L G +E +Q + R E + Sbjct: 230 DPRQALYGGSADGLVLPVELARHARVLLRPGGWLLMEHDDSQGESLPRALEEIGFDQLAD 289 Query: 250 FKDYGGNDRVL 260 D G RV+ Sbjct: 290 HLDLAGRPRVV 300 >gi|157363844|ref|YP_001470611.1| HemK family modification methylase [Thermotoga lettingae TMO] gi|157314448|gb|ABV33547.1| modification methylase, HemK family [Thermotoga lettingae TMO] Length = 272 Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 64/191 (33%), Positives = 94/191 (49%), Gaps = 15/191 (7%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110 + I G FY + L++ F PR ETE+LVD AL I K + +LD+GTG+GA Sbjct: 69 LQYITGKCYFYGLELSVEEGVFIPRVETEVLVDIALDI----IGKNKLSTVLDIGTGSGA 124 Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFD---V 167 + LA+ + K DIS KAL A NA F + + + V+ + + + Sbjct: 125 IALAIALNTN-CKVYASDISKKALLTAMKNAADYAAKIEF--FRGAFLTPVKHIINEIQL 181 Query: 168 IVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227 IVSNPPYI + L +V +P +L G DGL YR I L K+ + +E Sbjct: 182 IVSNPPYIP--VSSKLPKDVMH-EPHEALFAGNDGLDFYRQIFS--EPDLLKNKILIMEF 236 Query: 228 GYNQKVDVVRI 238 +QK ++ +I Sbjct: 237 SPDQKEEIQKI 247 >gi|90416051|ref|ZP_01223984.1| probable DNA methylase [marine gamma proteobacterium HTCC2207] gi|90332425|gb|EAS47622.1| probable DNA methylase [marine gamma proteobacterium HTCC2207] Length = 314 Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 55/166 (33%), Positives = 86/166 (51%), Gaps = 6/166 (3%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+LDL TG+G + +A + V DIS +AL++ +N + + R ++SD F Sbjct: 144 RVLDLCTGSGCIGIACAYAFEEAEVVLSDISPEALQVTAANIAQHKLGYRVSAVESDLFQ 203 Query: 160 SVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 + G F +IVSNPPY+++ + E + +P I+L G DGL R + + HL Sbjct: 204 QMSGEQFQLIVSNPPYVDAEDYASMPDEYQH-EPEIALASGSDGLDFTRRLLREAADHLT 262 Query: 219 KDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 ++G+ VE+G N V + R F S FL F + G+ V L R Sbjct: 263 EEGVLVVEVG-NSWVALERDFPSVP-FLWLEFSE--GDGGVFLLTR 304 >gi|90409142|ref|ZP_01217261.1| ribosomal protein L3P methyltransferase [Psychromonas sp. CNPT3] gi|90309750|gb|EAS37916.1| ribosomal protein L3P methyltransferase [Psychromonas sp. CNPT3] Length = 302 Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 49/133 (36%), Positives = 74/133 (55%), Gaps = 2/133 (1%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 RILDL TG+ + +A P VDIS AL++A+ N +GV ++ + SD FS Sbjct: 135 RILDLCTGSACIAIACAYAFPDAYVDAVDISEDALDVAEINIQGHGVEQQVIPMLSDLFS 194 Query: 160 SVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 +E +D+IVSNPPY+++ + L E + +P + L G DGL R + + LN Sbjct: 195 GIENEKYDLIVSNPPYVDNEDMQNLPAEFK-HEPELGLASGFDGLDLVRKMLAQAADMLN 253 Query: 219 KDGLCSVEIGYNQ 231 +GL VE+G +Q Sbjct: 254 DNGLLFVEVGNSQ 266 >gi|316932711|ref|YP_004107693.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Rhodopseudomonas palustris DX-1] gi|315600425|gb|ADU42960.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Rhodopseudomonas palustris DX-1] Length = 337 Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 48/134 (35%), Positives = 70/134 (52%), Gaps = 6/134 (4%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVSERFDTLQS 155 V R+LDL TG+G CLA+L F VD+S AL +A N + + +R Sbjct: 172 VERVLDLCTGSG--CLAILAAYAFPNATVDAVDLSKDALAVATRNVAEHQLDDRVSLYHG 229 Query: 156 DWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214 D F + + +D+I+SNPPY+++ + L E R +P ++ DGG DGL+ R I Sbjct: 230 DLFGPLGDERYDLIISNPPYVDADGMASLPAECR-AEPAMAFDGGDDGLTIIRRILTEAK 288 Query: 215 RHLNKDGLCSVEIG 228 HL DG E+G Sbjct: 289 NHLTPDGGLLCEVG 302 >gi|167975332|ref|ZP_02557609.1| methyltransferase, HemK family [Ureaplasma urealyticum serovar 12 str. ATCC 33696] gi|168362409|ref|ZP_02695588.1| methyltransferase, HemK family [Ureaplasma urealyticum serovar 13 str. ATCC 33698] gi|195867397|ref|ZP_03079401.1| methyltransferase, HemK family [Ureaplasma urealyticum serovar 9 str. ATCC 33175] gi|198273462|ref|ZP_03205998.1| methyltransferase, HemK family [Ureaplasma urealyticum serovar 4 str. ATCC 27816] gi|225550717|ref|ZP_03771666.1| methyltransferase, HemK family [Ureaplasma urealyticum serovar 2 str. ATCC 27814] gi|171903368|gb|EDT49657.1| methyltransferase, HemK family [Ureaplasma urealyticum serovar 13 str. ATCC 33698] gi|195659907|gb|EDX53287.1| methyltransferase, HemK family [Ureaplasma urealyticum serovar 12 str. ATCC 33696] gi|195660873|gb|EDX54126.1| methyltransferase, HemK family [Ureaplasma urealyticum serovar 9 str. ATCC 33175] gi|198249982|gb|EDY74762.1| methyltransferase, HemK family [Ureaplasma urealyticum serovar 4 str. ATCC 27816] gi|225379871|gb|EEH02233.1| methyltransferase, HemK family [Ureaplasma urealyticum serovar 2 str. ATCC 27814] Length = 290 Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 63/222 (28%), Positives = 107/222 (48%), Gaps = 11/222 (4%) Query: 46 LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLG 105 + + + RILG+ F R + + F R ETELLVD + + + + ++D+ Sbjct: 65 INEKPLERILGYGYFCGRRFYVDENVFAFRVETELLVD--VINKIIKQSTHQIKSVIDVC 122 Query: 106 TGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN---GVSERFDTLQSDWFSSVE 162 G+G + L++ +DIS A+ +K NA + G++ ++Q +F + Sbjct: 123 CGSGVLGLSVKMNFNNLDVSLLDISLDAISNSKKNAQYHNIEGINYLHKSMQK-YFLHTK 181 Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG--GIDGLSHYRTIADGVSRHLNKD 220 FD+I+ NPPYI+S L +V D+DP +L DG+S Y I + +S NK Sbjct: 182 KRFDLIICNPPYIKSDYQ--LDKQVLDYDPLNALVDFEHKDGISFYLFIINNISLICNKK 239 Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAF-KDYGGNDRVLL 261 EIGY+QK + + + + + F DY R+L+ Sbjct: 240 FTIVFEIGYDQKTILENVLKKNEFPIFYYFINDYNNLYRILV 281 >gi|289178306|gb|ADC85552.1| Peptide release factor-glutamine N5-methyltransferase [Bifidobacterium animalis subsp. lactis BB-12] Length = 319 Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 52/174 (29%), Positives = 85/174 (48%), Gaps = 21/174 (12%) Query: 40 NAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV 99 + + R E + I+G F + L + F PR ETEL+ A+ + + + + Sbjct: 87 HMVCRRHAREPLQYIVGHAPFRYLDLKVGPGVFIPRQETELIAQDAIEW----VTRHGIY 142 Query: 100 --RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 RI+DL G+GA+ LAL E P + GV++S +A + N +S + + +++ Sbjct: 143 SPRIVDLCAGSGALGLALATEIPGAQVWGVELSPQAAVWTRRN--ITQISRTYPDITANY 200 Query: 158 ------------FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199 + ++G DV+VSNPPY+ V EVRDFDP ++L GG Sbjct: 201 HLEIADATCPITLAHLDGTVDVVVSNPPYVPQSQVP-QQPEVRDFDPSLALYGG 253 >gi|156975384|ref|YP_001446291.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Vibrio harveyi ATCC BAA-1116] gi|156526978|gb|ABU72064.1| hypothetical protein VIBHAR_03115 [Vibrio harveyi ATCC BAA-1116] Length = 310 Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 42/134 (31%), Positives = 72/134 (53%), Gaps = 2/134 (1%) Query: 96 RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155 + RI+DL TG+G + +A P + +DIS AL++A+ N +G+ ++ ++S Sbjct: 131 EEPTRIMDLCTGSGCIAIACAHAFPEAEVDAIDISTDALQVAEQNVQDHGMEQQVFPIRS 190 Query: 156 DWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214 D F + + +++IVSNPPY++ ++ L E +P + L G DGL R I Sbjct: 191 DLFRDLSKEKYNLIVSNPPYVDEEDMNSLPDEFT-HEPELGLAAGTDGLKLVRRILANAP 249 Query: 215 RHLNKDGLCSVEIG 228 +L DG+ E+G Sbjct: 250 DYLTDDGILVCEVG 263 >gi|84494538|ref|ZP_00993657.1| putative methylase [Janibacter sp. HTCC2649] gi|84384031|gb|EAP99911.1| putative methylase [Janibacter sp. HTCC2649] Length = 285 Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 68/229 (29%), Positives = 108/229 (47%), Gaps = 22/229 (9%) Query: 17 LSSHQVIVDPDSVLDDRQRFFLTNA--------IVRSLKHESIHRILGWRDFYNVRLTLS 68 L++H + VD V R+R L + + + + G F + L + Sbjct: 30 LAAHALGVDSSEV---RRRMILGGSEPEGYAALVAERASRVPLQHLTGRAWFRGLELEVG 86 Query: 69 SDTFEPRPETELLVDSALAFSLPRIE---KRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 F PRPETE++ A+ +E VV +DL TG+GA+ LA+ E P + Sbjct: 87 PGVFVPRPETEVVAGWAIDAVTECVEVGVAEPVV--IDLCTGSGAIALAIKSEVPDARVH 144 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL--FDVIVSNPPYIESVIVDCL 183 V++S A+ A+ N G+ + + D ++ E L DV+VSNPPYI + + + Sbjct: 145 AVEVSDLAVAWAQRNRERLGLD--VEIVHGDAVTAFEELAEVDVVVSNPPYIPTT-AEPI 201 Query: 184 GLEVRDFDPRISLDGGI-DGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231 EVRD DP ++L GG DGL+ R +A + L G+ +E +Q Sbjct: 202 DPEVRDHDPHVALYGGSEDGLAIPRLVAGRAAELLRSGGVLVMEHADSQ 250 >gi|153834410|ref|ZP_01987077.1| hypothetical adenine-specific methylase YfcB [Vibrio harveyi HY01] gi|269961666|ref|ZP_06176028.1| conserved hypothetical protein [Vibrio harveyi 1DA3] gi|148869181|gb|EDL68209.1| hypothetical adenine-specific methylase YfcB [Vibrio harveyi HY01] gi|269833707|gb|EEZ87804.1| conserved hypothetical protein [Vibrio harveyi 1DA3] Length = 310 Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 42/134 (31%), Positives = 72/134 (53%), Gaps = 2/134 (1%) Query: 96 RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155 + RI+DL TG+G + +A P + +DIS AL++A+ N +G+ ++ ++S Sbjct: 131 EEPTRIMDLCTGSGCIAIACAHAFPEAEVDAIDISTDALQVAEQNVQDHGMEQQVFPIRS 190 Query: 156 DWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214 D F + + +++IVSNPPY++ ++ L E +P + L G DGL R I Sbjct: 191 DLFRDLPKEKYNLIVSNPPYVDEEDMNSLPDEFT-HEPELGLAAGTDGLKLVRRILANAP 249 Query: 215 RHLNKDGLCSVEIG 228 +L DG+ E+G Sbjct: 250 DYLTDDGILVCEVG 263 >gi|289812520|ref|ZP_06543149.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 139 Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 50/120 (41%), Positives = 66/120 (55%), Gaps = 6/120 (5%) Query: 44 RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103 R + E I + G R+F+++ L +S T PRP+TE LV+ ALA LP RILD Sbjct: 22 RRKQGEPIAYLTGLREFWSLPLFVSPATLIPRPDTECLVEQALA-RLP----VKTCRILD 76 Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG 163 LGTGTGA+ LAL E P + VD A+ +A NA + LQS WFS++ G Sbjct: 77 LGTGTGAIALALACERPDCEVTAVDRMPDAVALAIRNAEHLAI-RNVRILQSCWFSALSG 135 >gi|296158921|ref|ZP_06841749.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Burkholderia sp. Ch1-1] gi|295890796|gb|EFG70586.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Burkholderia sp. Ch1-1] Length = 294 Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 56/175 (32%), Positives = 85/175 (48%), Gaps = 11/175 (6%) Query: 91 PRIE-KRDVVRILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVS 147 P +E V +L+L TG+G CLA+L F VD+ ALE+A N + Sbjct: 119 PYVEDPEQVSAVLELCTGSG--CLAILAAHAFPNADIDAVDLCAPALEVAMRNVTDYKLD 176 Query: 148 ERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206 +R + D ++ + E +DVI++NPPY+ + + L E R +P ++L GG DG+ Sbjct: 177 DRIALFEGDLYAPLAERRYDVIITNPPYVNAASMQELPAEYR-HEPDMALAGGADGMDIV 235 Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 R I L DG+ VEIG N++ V F L ++ G+D V L Sbjct: 236 RRIIADARNWLTDDGVLVVEIG-NERQHVEAAFGGLDLVWLST---SAGDDNVFL 286 >gi|262276348|ref|ZP_06054157.1| hypothetical adenine-specific methylase yfcB [Grimontia hollisae CIP 101886] gi|262220156|gb|EEY71472.1| hypothetical adenine-specific methylase yfcB [Grimontia hollisae CIP 101886] Length = 310 Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 45/130 (34%), Positives = 72/130 (55%), Gaps = 2/130 (1%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 RI+DL TG+G + +A P + VDIS ALE+A+ N +G+ ++ ++SD F Sbjct: 135 RIMDLCTGSGCIGIACAYAFPDAEVDLVDISSDALEVAEMNVQEHGLEQQVFPIRSDLFR 194 Query: 160 SV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 + + +D+IVSNPPY++ ++ L E R +P + L G DGL R I +L Sbjct: 195 DLPKDKYDLIVSNPPYVDEEDMNALPDEFR-HEPELGLAAGRDGLKLMRRIIANAPDYLT 253 Query: 219 KDGLCSVEIG 228 + G+ E+G Sbjct: 254 EQGILICEVG 263 >gi|183602494|ref|ZP_02963859.1| possible methylase protein [Bifidobacterium animalis subsp. lactis HN019] gi|219683537|ref|YP_002469920.1| methylase protein [Bifidobacterium animalis subsp. lactis AD011] gi|241190568|ref|YP_002967962.1| methylase of polypeptide chain release factor [Bifidobacterium animalis subsp. lactis Bl-04] gi|241195974|ref|YP_002969529.1| methylase of polypeptide chain release factor [Bifidobacterium animalis subsp. lactis DSM 10140] gi|183218135|gb|EDT88781.1| possible methylase protein [Bifidobacterium animalis subsp. lactis HN019] gi|219621187|gb|ACL29344.1| possible methylase protein [Bifidobacterium animalis subsp. lactis AD011] gi|240248960|gb|ACS45900.1| Methylase of polypeptide chain release factor [Bifidobacterium animalis subsp. lactis Bl-04] gi|240250528|gb|ACS47467.1| Methylase of polypeptide chain release factor [Bifidobacterium animalis subsp. lactis DSM 10140] gi|295793555|gb|ADG33090.1| Methylase of polypeptide chain release factor [Bifidobacterium animalis subsp. lactis V9] Length = 304 Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 52/174 (29%), Positives = 85/174 (48%), Gaps = 21/174 (12%) Query: 40 NAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV 99 + + R E + I+G F + L + F PR ETEL+ A+ + + + + Sbjct: 72 HMVCRRHAREPLQYIVGHAPFRYLDLKVGPGVFIPRQETELIAQDAIEW----VTRHGIY 127 Query: 100 --RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 RI+DL G+GA+ LAL E P + GV++S +A + N +S + + +++ Sbjct: 128 SPRIVDLCAGSGALGLALATEIPGAQVWGVELSPQAAVWTRRN--ITQISRTYPDITANY 185 Query: 158 ------------FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199 + ++G DV+VSNPPY+ V EVRDFDP ++L GG Sbjct: 186 HLEIADATCPITLAHLDGTVDVVVSNPPYVPQSQVP-QQPEVRDFDPSLALYGG 238 >gi|192289768|ref|YP_001990373.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Rhodopseudomonas palustris TIE-1] gi|192283517|gb|ACE99897.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Rhodopseudomonas palustris TIE-1] Length = 340 Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 47/134 (35%), Positives = 71/134 (52%), Gaps = 6/134 (4%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVSERFDTLQS 155 + R+LDL TG+G CLA+L F VD+S AL +A N + + +R Sbjct: 175 IERVLDLCTGSG--CLAILAAYAFPNATVDAVDLSKDALAVATRNVAEHRLDDRVSLYHG 232 Query: 156 DWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214 D F + + +D+I++NPPY+++ + L E R +P ++ DGG DGL+ R I Sbjct: 233 DLFDPLGDERYDLIITNPPYVDADGMASLPAECR-AEPAMAFDGGDDGLTIIRRILAEAK 291 Query: 215 RHLNKDGLCSVEIG 228 HLN DG E+G Sbjct: 292 DHLNPDGGLLCEVG 305 >gi|322503822|emb|CBZ38908.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 514 Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 48/167 (28%), Positives = 76/167 (45%), Gaps = 39/167 (23%) Query: 48 HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR----------D 97 H+ + I+G + F+ + + PRPETE+ + L R E+R Sbjct: 243 HKPLSYIIGSQPFFGCDIHCEAPLLCPRPETEMWTHWMVYKHLARAERRTFTTGFSPAVS 302 Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSD 156 +RILD+ GTG + +AL K P +DI +A+ +++ NA+ NG+S R+ ++SD Sbjct: 303 PIRILDVCCGTGCIGVALAKHLPSAVVTALDILPEAVRVSRENAMRNGISPARYSAMESD 362 Query: 157 WFS----------------------------SVEGLFDVIVSNPPYI 175 FS + G +DVIVSNPPY+ Sbjct: 363 MFSCFLEGQVSGQPGDSADLSEDRPFGTVKDAYAGTYDVIVSNPPYV 409 >gi|146104511|ref|XP_001469847.1| hypothetical protein [Leishmania infantum] gi|134074217|emb|CAM72959.1| conserved hypothetical protein [Leishmania infantum JPCM5] Length = 514 Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 48/167 (28%), Positives = 76/167 (45%), Gaps = 39/167 (23%) Query: 48 HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR----------D 97 H+ + I+G + F+ + + PRPETE+ + L R E+R Sbjct: 243 HKPLSYIIGSQPFFGCDIHCEAPLLCPRPETEMWTHWMVYKHLARAERRTFTTGFSPAVS 302 Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSD 156 +RILD+ GTG + +AL K P +DI +A+ +++ NA+ NG+S R+ ++SD Sbjct: 303 PIRILDVCCGTGCIGVALAKHLPSAVVTALDILPEAVRVSRENAMRNGISPARYSAMESD 362 Query: 157 WFS----------------------------SVEGLFDVIVSNPPYI 175 FS + G +DVIVSNPPY+ Sbjct: 363 MFSCFLEGQVSGQPGDSADLSEDRPFGTVKDAYAGTYDVIVSNPPYV 409 >gi|242240012|ref|YP_002988193.1| modification methylase, HemK family [Dickeya dadantii Ech703] gi|242132069|gb|ACS86371.1| modification methylase, HemK family [Dickeya dadantii Ech703] Length = 310 Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 57/192 (29%), Positives = 88/192 (45%), Gaps = 10/192 (5%) Query: 74 PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133 PR L+D+ LP + ILDL TG+G + +A P + VDIS +A Sbjct: 113 PRSPIGELIDNRFDSLLPHQPQH----ILDLCTGSGCIAIACAHAFPEAEVDAVDISPEA 168 Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDP 192 L + + N +GV + SD F S+ + +D+IV+NPPY++ + L E R +P Sbjct: 169 LAVTEQNIQQHGVEHSVTPICSDLFRSLPAIKYDLIVTNPPYVDEEDMFDLPQEYR-HEP 227 Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKD 252 + L G DGL R I +L DG+ E+G + +V + + V + Sbjct: 228 ELGLAAGDDGLDLVRRILACAPDYLRDDGVLICEVGNS----MVHMMDQYPDIPVTWLEF 283 Query: 253 YGGNDRVLLFCR 264 G D V + R Sbjct: 284 DNGGDGVFMLTR 295 >gi|254514209|ref|ZP_05126270.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [gamma proteobacterium NOR5-3] gi|219676452|gb|EED32817.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [gamma proteobacterium NOR5-3] Length = 321 Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 47/139 (33%), Positives = 67/139 (48%), Gaps = 2/139 (1%) Query: 91 PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150 P K+ RILDL G G + +A P + V DI AL +A+ N + R Sbjct: 138 PWYSKKTPTRILDLCCGGGCIGIAAAVYQPELQVVLADIDADALSLARENIARYELQSRV 197 Query: 151 DTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209 QSD ++ + FDVI+ NPPY+++ + C+ E PR L G DGL R I Sbjct: 198 QVRQSDLMDALGDERFDVILCNPPYVDANDLACMPAEYHCEPPR-GLGSGEDGLDLARRI 256 Query: 210 ADGVSRHLNKDGLCSVEIG 228 +HL +GL +E+G Sbjct: 257 LRNAQQHLTPEGLLFLELG 275 >gi|300789605|ref|YP_003769896.1| HemK protein [Amycolatopsis mediterranei U32] gi|299799119|gb|ADJ49494.1| HemK protein [Amycolatopsis mediterranei U32] Length = 288 Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 59/221 (26%), Positives = 99/221 (44%), Gaps = 16/221 (7%) Query: 47 KHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGT 106 K + + GW ++ + + + F PRPETELL++ + F ++ R+ ++DL T Sbjct: 67 KRIPLQYLTGWAALGDITVAVGAGVFVPRPETELLLEWGVKF----LQGREFPVVVDLCT 122 Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF-------DTLQSDWFS 159 G+GA+ LA+ P VDI +AL A+ NA + + D F+ Sbjct: 123 GSGALALAVAHARPDAVVYAVDIDPQALAWARHNADVHADAGNTPIRLYSGDIGDPTMFA 182 Query: 160 SVEGLFDVIVSNPPYI-ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 ++GL D+++ NPPY+ E V EV + DP ++ GL+ R +R L Sbjct: 183 ELDGLVDLVLCNPPYVPEGTPVPP---EVAEHDPPRAVFAEESGLAVIRHAIAAGARLLR 239 Query: 219 KDGLCSVEIGYNQKVDVVRIFESRKLFL-VNAFKDYGGNDR 258 G ++E V + +R++ V D G R Sbjct: 240 PGGGLAIEHDDTHGSAVPALVRARRVLTGVEGHTDLTGRAR 280 >gi|323496540|ref|ZP_08101594.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Vibrio sinaloensis DSM 21326] gi|323318384|gb|EGA71341.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Vibrio sinaloensis DSM 21326] Length = 310 Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 42/134 (31%), Positives = 73/134 (54%), Gaps = 2/134 (1%) Query: 96 RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155 + VRI+DL TG+G + +A P + +DIS AL++A+ N +G+ ++ ++S Sbjct: 131 EEPVRIMDLCTGSGCIAIACAHAFPDAEVDAIDISTDALQVAEQNVQDHGMEQQVFPIRS 190 Query: 156 DWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214 D F + + +++IVSNPPY++ ++ L E +P + L G DGL R I Sbjct: 191 DLFRDLPKEKYNLIVSNPPYVDEEDMNSLPDEFT-HEPELGLAAGTDGLKLVRRILANAP 249 Query: 215 RHLNKDGLCSVEIG 228 +L +G+ E+G Sbjct: 250 DYLTDNGILICEVG 263 >gi|148976458|ref|ZP_01813164.1| N5-glutamine methyltransferase [Vibrionales bacterium SWAT-3] gi|145964281|gb|EDK29537.1| N5-glutamine methyltransferase [Vibrionales bacterium SWAT-3] Length = 310 Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 42/134 (31%), Positives = 72/134 (53%), Gaps = 2/134 (1%) Query: 96 RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155 + RI+DL TG+G + +A P + +DIS AL++A+ N +G+ ++ ++S Sbjct: 131 EEPTRIMDLCTGSGCIAIACAHAFPEAEVDAIDISTDALQVAEQNVQDHGMEQQVFPIRS 190 Query: 156 DWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214 D F + + +++IVSNPPY++ ++ L E +P + L G DGL R I Sbjct: 191 DLFRDLPKEKYNLIVSNPPYVDEEDMNSLPDEFT-HEPELGLAAGTDGLKLVRRILANAP 249 Query: 215 RHLNKDGLCSVEIG 228 +L DG+ E+G Sbjct: 250 DYLTDDGILICEVG 263 >gi|171463263|ref|YP_001797376.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Polynucleobacter necessarius subsp. necessarius STIR1] gi|171192801|gb|ACB43762.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 298 Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 71/258 (27%), Positives = 115/258 (44%), Gaps = 24/258 (9%) Query: 19 SHQVIVDPDSVLDD--------RQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70 S Q+ + P LD +Q+ T A R + + ILG V S Sbjct: 45 SKQLDLSPAEALDHLDEAITAVQQQTASTVADTRISTRKPLAYILGEAWLMGVPFFCSEQ 104 Query: 71 TFEPRPE-TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129 + PR EL+VD +L LP K LDL TG G++ + L P DI Sbjct: 105 SIVPRSWIAELIVDGSLESWLPADGKA-----LDLCTGNGSLAILLALSCPDIHVSACDI 159 Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-----EGLFDVIVSNPPYIESVIVDCLG 184 S AL +A N +G++ + + L D + ++ + LF++I+ NPPY+ + ++ L Sbjct: 160 SMPALSVAARNLDRHGLNTQVELLDGDLWDALPKPNEDNLFNLIICNPPYVNANSMNALP 219 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 E +P ++L GG DG+ R I +L++ G +EIG N+ + + F Sbjct: 220 AEYH-AEPALALAGGGDGMDLIRRILAQAPDYLSERGAILLEIG-NEYENFKKAFPQIPA 277 Query: 245 FLVNAFKDYGGNDRVLLF 262 + K G+++VLL Sbjct: 278 IWM---KVSAGDEQVLLI 292 >gi|86748298|ref|YP_484794.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Rhodopseudomonas palustris HaA2] gi|86571326|gb|ABD05883.1| modification methylase, HemK family [Rhodopseudomonas palustris HaA2] Length = 354 Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 47/135 (34%), Positives = 70/135 (51%), Gaps = 7/135 (5%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVSERFDTLQS 155 V R+LDL TG+G CLA+L F VD+S AL +A N + + +R Sbjct: 188 VARVLDLCTGSG--CLAILAARSFPNAAVDAVDLSEDALAVATRNVADHHLGDRLSLHHG 245 Query: 156 DWFSSV--EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213 D F+ + + +D+I++NPPY+++ + L E R +P ++ DGG DGL R I Sbjct: 246 DLFAPLLQDARYDLIITNPPYVDADGMANLPAECR-AEPAMAFDGGDDGLDIIRRILAEA 304 Query: 214 SRHLNKDGLCSVEIG 228 HL DG E+G Sbjct: 305 KDHLTPDGGLLCEVG 319 >gi|73541585|ref|YP_296105.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Ralstonia eutropha JMP134] gi|72118998|gb|AAZ61261.1| Modification methylase HemK [Ralstonia eutropha JMP134] Length = 297 Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 50/172 (29%), Positives = 83/172 (48%), Gaps = 7/172 (4%) Query: 94 EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153 E V +L+L TG+G + + P + VDIS AL +A+ N + +R Sbjct: 125 ETSQVGPVLELCTGSGCLPIIAAHVWPNAQIDAVDISPDALAVARRNVADYKMQDRIHLF 184 Query: 154 QSDWFSSVEG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIAD 211 + D ++ + +DVI++NPPY+ + L E +PR++L GG DG+ R I Sbjct: 185 EGDLYAPLPAGATYDVILTNPPYVNESSMQALPPEYLA-EPRVALAGGDDGMDVVRRIIA 243 Query: 212 GVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFC 263 G LN G+ VEIG N+ +V F + ++ + G+++V L Sbjct: 244 GAKARLNPGGVLVVEIG-NEHANVEAAFPNLEIVWLPV---SAGDEQVFLLT 291 >gi|312796230|ref|YP_004029152.1| ribosomal protein L3P methyltransferase [Burkholderia rhizoxinica HKI 454] gi|312168005|emb|CBW75008.1| Ribosomal protein L3P methyltransferase (EC 2.1.1.-) [Burkholderia rhizoxinica HKI 454] Length = 196 Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 54/176 (30%), Positives = 86/176 (48%), Gaps = 11/176 (6%) Query: 91 PRIEKRDVV-RILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVS 147 P I+ D + +L+L TG+G CLA++ F VD+S AL++A+ N ++ Sbjct: 18 PWIDAPDELGAVLELCTGSG--CLAIMAADAFPGAEIDAVDLSAHALQVAQRNVDDYDLN 75 Query: 148 ERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206 ER + D F + + +D+I++NPPY+ + L E R +P ++L GG DG+ Sbjct: 76 ERVTLFEGDLFEPLPQRQYDLILANPPYVNEASMQALPAEYR-HEPAMALAGGSDGMDIV 134 Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262 R I L DG+ +EIG N++ V F L + G+D V L Sbjct: 135 RRIIGAARDWLTDDGVLVIEIG-NERPHVEAAFGGLPL---TWLPTHAGDDSVFLL 186 >gi|56460001|ref|YP_155282.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Idiomarina loihiensis L2TR] gi|56179011|gb|AAV81733.1| Modification methylase, HemK family [Idiomarina loihiensis L2TR] Length = 309 Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 52/166 (31%), Positives = 84/166 (50%), Gaps = 6/166 (3%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+LDL TG G + +A P + +DIS +ALE+A+ N +G++ R +QSD F Sbjct: 135 RVLDLCTGGGCIAIACAYAFPEAEVDALDISTEALEVAEFNIEQHGLTHRVTPIQSDLFD 194 Query: 160 SVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 +V+ +D+IV+NPPY+++ + L E +P + L G DGL + S LN Sbjct: 195 AVKAEKYDLIVTNPPYVDAEDMTDLPPEYH-HEPELGLAAGEDGLILVDKMLMQASDLLN 253 Query: 219 KDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 GL E+G + + ++ ++L A G D V L + Sbjct: 254 DGGLFVCEVGNSMPALAEKYPKTPFMWLEFA----NGGDGVFLLTK 295 >gi|257126616|ref|YP_003164730.1| modification methylase, HemK family [Leptotrichia buccalis C-1013-b] gi|257050555|gb|ACV39739.1| modification methylase, HemK family [Leptotrichia buccalis C-1013-b] Length = 379 Score = 72.0 bits (175), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 65/221 (29%), Positives = 108/221 (48%), Gaps = 12/221 (5%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAF--------SLPRIEKRDVVRIL 102 + +L ++F+ + + PR +TE+LV+ A+ ++ ++ +IL Sbjct: 153 VQYLLNEQEFFGRKFYVDKGVLIPRQDTEVLVEKAIEILKNDTLKKNISEKNSKNRKKIL 212 Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA-VTNGVSERFDTLQSDWFSSV 161 D+G G+G + +++ E +G+DIS KALE ++ N + N + +F L+S+ F ++ Sbjct: 213 DIGAGSGIIGISVALEIKDSYVLGIDISEKALETSEKNKEILNVKNIKF--LKSNLFENI 270 Query: 162 E-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220 E FD+I+SNPPYI V + + +P +L DGL Y I +L Sbjct: 271 EFKEFDMIISNPPYISFNEVGIMSDDTLLHEPSDALFAENDGLYFYYEICQNALDYLADS 330 Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 G EIGY Q +V I S V KD G DRV++ Sbjct: 331 GYLLFEIGYKQGNNVAEIMTSSGFKNVEVIKDLTGLDRVVV 371 >gi|303273570|ref|XP_003056145.1| predicted protein [Micromonas pusilla CCMP1545] gi|226462229|gb|EEH59521.1| predicted protein [Micromonas pusilla CCMP1545] Length = 423 Score = 72.0 bits (175), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 74/243 (30%), Positives = 106/243 (43%), Gaps = 52/243 (21%) Query: 57 WRDFYNVRLTLSSDTFEPRPETELLVD---SALAFSLPRIEKRDVVR--ILDLGTGTGAV 111 WR+ L ++ PRPETELLVD SA+ EK +V +DLGTG+GA+ Sbjct: 174 WRELV---LVVTPAVLIPRPETELLVDIIKSAIH------EKPSLVESPWVDLGTGSGAL 224 Query: 112 CLALLKESPFFKGV---------------GVDISCKALEIAKSNA-----VTNGVSERFD 151 +++ E K V++ +A IA+ N +T G S Sbjct: 225 AISIAAEISKVKHSLNPAQSSREEEVIVHAVELCPRAAAIARHNVSRYRNITGGGSGGVS 284 Query: 152 TLQSDWFSSVE----------GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI- 200 + WF +E G F IVSNPPYI S L EVR +P I+L+GG Sbjct: 285 VYEGSWFRPLEVRGLTATVGCGTFAGIVSNPPYIPSKDFLSLQPEVRCHEPWIALEGGPG 344 Query: 201 DGLSHYRTIADGVSRHLNKDGLCSVEI-GYNQKVDVVRIFESRKLFLVNAFKDYGGNDRV 259 GL ++ G + HL G ++E G Q +V + E L +D G D++ Sbjct: 345 PGLDALISVCTGAAVHLLGGGFLALETNGGRQAHEVAELLEHMSL------QDTSGCDKM 398 Query: 260 LLF 262 +F Sbjct: 399 PIF 401 >gi|167856506|ref|ZP_02479219.1| hypothetical adenine-specific methylase [Haemophilus parasuis 29755] gi|167852370|gb|EDS23671.1| hypothetical adenine-specific methylase [Haemophilus parasuis 29755] Length = 314 Score = 72.0 bits (175), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 48/156 (30%), Positives = 83/156 (53%), Gaps = 4/156 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 RILD+ TG+G + +A + P + VD+S AL +A+ N + ++ R QSD F Sbjct: 143 RILDMCTGSGCIAIACADKFPNAEIDAVDLSVDALNVAEINIERHNMAHRVFPFQSDLFD 202 Query: 160 SV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 + + +D+IV+NPPY++ +D + E +P ++L G+DGL + I + L+ Sbjct: 203 DLPQDRYDLIVTNPPYVDQEDLDDMPEEFH-HEPEMALGSGVDGLDITKRILAQAADFLS 261 Query: 219 KDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYG 254 +G+ E+G N V ++ F S + FK+ G Sbjct: 262 DNGVLVCEVG-NSMVHLIEQFPSVPFHWLE-FKNGG 295 >gi|300024654|ref|YP_003757265.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Hyphomicrobium denitrificans ATCC 51888] gi|299526475|gb|ADJ24944.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Hyphomicrobium denitrificans ATCC 51888] Length = 315 Score = 72.0 bits (175), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 54/157 (34%), Positives = 80/157 (50%), Gaps = 8/157 (5%) Query: 78 TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALE 135 EL+ L +P + V R+LDL TG+G C+A+L F DIS AL Sbjct: 117 AELIARDGLGSIVP--DAAQVGRVLDLCTGSG--CIAILAAEAFPNAEIHASDISDDALA 172 Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194 +A N G+ +R T + D F + G +D+I+SNPPY+ + V+ E + +P++ Sbjct: 173 VAARNIRDYGLDQRVRTFKVDLFDGLPAGSYDLIISNPPYVAAAEVEAFAPEYQ-AEPKL 231 Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231 + GG+DGL + I DG L + G VEIG Q Sbjct: 232 AHLGGVDGLDLVKRILDGAGERLEEQGNLIVEIGTGQ 268 >gi|260913869|ref|ZP_05920343.1| protein-(glutamine-N5) methyltransferase [Pasteurella dagmatis ATCC 43325] gi|260631956|gb|EEX50133.1| protein-(glutamine-N5) methyltransferase [Pasteurella dagmatis ATCC 43325] Length = 313 Score = 72.0 bits (175), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 44/141 (31%), Positives = 79/141 (56%), Gaps = 3/141 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 RILD+ TG+G + +A + P + VD+S ALE+A+ N + + R +QSD F+ Sbjct: 142 RILDMCTGSGCIAIACAVQFPDAEVDAVDLSPDALEVAEINIERHQLLHRVFPMQSDLFN 201 Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 + + +D+IVSNPPY++ + + E ++P ++L G+DGL + I +L+ Sbjct: 202 DLAKVEYDLIVSNPPYVDEEDLADMPEEFH-YEPEMALGSGVDGLEITKRILYAAPDYLS 260 Query: 219 KDGLCSVEIGYNQKVDVVRIF 239 + G+ E+G N V ++ + Sbjct: 261 EKGVLVCEVG-NSMVHLIEQY 280 >gi|297560948|ref|YP_003679922.1| modification methylase, HemK family [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296845396|gb|ADH67416.1| modification methylase, HemK family [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 258 Score = 72.0 bits (175), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 57/199 (28%), Positives = 85/199 (42%), Gaps = 18/199 (9%) Query: 50 SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109 + +LGW F +R+ + F PRP TE L A A P +DL G+G Sbjct: 53 PLEHVLGWALFCGLRVRVDEGVFVPRPRTEFLARQARALLTPGAVA------VDLCCGSG 106 Query: 110 AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV--SERFDTLQSDWFSSVEGLFDV 167 A+ L DI ++ A+ N + V + +D L D + G V Sbjct: 107 ALGAVLAHTRADITLHAADIDAASVACARRNLPGHRVHRGDLYDALPPD----LRGRVQV 162 Query: 168 IVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227 +V+N PY+ + + L E R + R +LDGG DGL R +A R L G VE+ Sbjct: 163 LVANVPYVPTDRIALLPAEARVHEDRRALDGGQDGLDLLRRVAADAGRWLAPGGRVLVEV 222 Query: 228 GYNQKVDVVRIFESRKLFL 246 G Q + +R+ F+ Sbjct: 223 GQEQ------VLAAREAFV 235 >gi|293395104|ref|ZP_06639390.1| protein-(glutamine-N5) methyltransferase [Serratia odorifera DSM 4582] gi|291422281|gb|EFE95524.1| protein-(glutamine-N5) methyltransferase [Serratia odorifera DSM 4582] Length = 370 Score = 72.0 bits (175), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 55/159 (34%), Positives = 81/159 (50%), Gaps = 12/159 (7%) Query: 74 PR-PETELLVD--SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130 PR P EL+ D SAL PR ILD+ TG+G + +A P + VDIS Sbjct: 173 PRSPIGELINDRFSALIPHPPR-------HILDMCTGSGCIAIACGYAFPEAEVDAVDIS 225 Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRD 189 + L + + N +GV + ++SD F V + +D+IV+NPPY+++ + L E R Sbjct: 226 SEVLAVTERNIQAHGVEHQVIPIRSDLFREVPPIQYDLIVTNPPYVDAEDMSDLPQEFR- 284 Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228 F+P + L G DGL R I L+ DG+ E+G Sbjct: 285 FEPELGLAAGSDGLKLVRRILACAPDFLSDDGVLICEVG 323 >gi|238753805|ref|ZP_04615166.1| Uncharacterized adenine-specific methylase [Yersinia ruckeri ATCC 29473] gi|238708041|gb|EEQ00398.1| Uncharacterized adenine-specific methylase [Yersinia ruckeri ATCC 29473] Length = 314 Score = 72.0 bits (175), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 43/130 (33%), Positives = 67/130 (51%), Gaps = 2/130 (1%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ILD+ TG+G + +A P + VDIS L + + N +GV + ++SD F Sbjct: 139 HILDMCTGSGCIAIACAYAFPEAEVDAVDISADVLAVTEHNIQQHGVEHQVTPIRSDLFR 198 Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 + + +D+IV+NPPY++ + L E R F+P + L G DGL+ R I L Sbjct: 199 DLPPIKYDLIVTNPPYVDEEDMSDLPQEFR-FEPELGLAAGFDGLTLARRILACAPDFLQ 257 Query: 219 KDGLCSVEIG 228 DG+ E+G Sbjct: 258 DDGVLICEVG 267 >gi|210135233|ref|YP_002301672.1| S-adenosylmethionine-dependent methyltransferase [Helicobacter pylori P12] gi|210133201|gb|ACJ08192.1| S-adenosylmethionine-dependent methyltransferase [Helicobacter pylori P12] Length = 276 Score = 72.0 bits (175), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 69/232 (29%), Positives = 105/232 (45%), Gaps = 21/232 (9%) Query: 31 DDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSL 90 ++ RFF + + L I +LG DFY ++ PRPETE+LV AL Sbjct: 51 EEEVRFF--ELVGKRLNDCPIEYLLGSCDFYGRSFFVNEHVLIPRPETEILVQKALDI-- 106 Query: 91 PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150 I + + I ++G G+G V ++L E+P DIS KALE+A N + ER Sbjct: 107 --ISQYHLKEIGEIGIGSGCVSVSLALENPKLCIYASDISPKALEVALKNIERFNLKERV 164 Query: 151 DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDF-DPRISLDGGIDG---LSHY 206 Q+ + + + +++VSNPPY I LE +P +L GG+ G L Sbjct: 165 FLKQTHLWDHMP-MIEMLVSNPPY----IAKGYPLEKSVLKEPHEALFGGVKGDEILKEI 219 Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258 +A G+ K + E+GY+Q + E + +KD G DR Sbjct: 220 VFLAAGL-----KIPFLACEMGYDQLKSLKECLEFCG-YDAEFYKDLSGFDR 265 >gi|271966754|ref|YP_003340950.1| HemK family modification methylase [Streptosporangium roseum DSM 43021] gi|270509929|gb|ACZ88207.1| HemK family modification methylase [Streptosporangium roseum DSM 43021] Length = 293 Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 59/204 (28%), Positives = 86/204 (42%), Gaps = 11/204 (5%) Query: 38 LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL---------AF 88 L + R + + +LGW +F +R+T+ F PR TE L A+ A Sbjct: 52 LAAMVDRRVAGLPLEHVLGWAEFCGLRITVDPGVFVPRRRTEFLAHQAVAVARQAADQAD 111 Query: 89 SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148 R+ R VV +DL G+GAV L+ + VDI + A N G Sbjct: 112 RAGRVRPRTVV--VDLCCGSGAVGATLIAALDGVELHAVDIDPAEVRCAHRNVAAAGGQV 169 Query: 149 RFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208 L +++ G DV+V+ PY+ + + L E R +PR++LDGG DGL R Sbjct: 170 YEGDLYEPLPATLRGRVDVLVACAPYVPTEAIGLLPPEARIHEPRVALDGGADGLDVVRR 229 Query: 209 IADGVSRHLNKDGLCSVEIGYNQK 232 + L DG VE Q Sbjct: 230 VIAEAPLWLAPDGSLLVETSERQA 253 >gi|108800850|ref|YP_641047.1| HemK family modification methylase [Mycobacterium sp. MCS] gi|119869990|ref|YP_939942.1| HemK family modification methylase [Mycobacterium sp. KMS] gi|126436448|ref|YP_001072139.1| HemK family modification methylase [Mycobacterium sp. JLS] gi|108771269|gb|ABG09991.1| modification methylase, HemK family [Mycobacterium sp. MCS] gi|119696079|gb|ABL93152.1| modification methylase, HemK family [Mycobacterium sp. KMS] gi|126236248|gb|ABN99648.1| modification methylase, HemK family [Mycobacterium sp. JLS] Length = 303 Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 59/181 (32%), Positives = 87/181 (48%), Gaps = 8/181 (4%) Query: 47 KHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGT 106 K + + G F V++++ F PRPETE L + + +LP D I+DL T Sbjct: 69 KRIPLQHLTGTAAFGPVQVSVGPGVFIPRPETEALFEWVVRQALP-----DEPLIVDLCT 123 Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSDWFSSVEGLF 165 G+GA+ LA+ P + + V+ S AL A+ N +GV D +D ++G Sbjct: 124 GSGALALAIATALPKARVIAVENSADALGYARRNLAGSGVELLDADVTAADLRPDLDGAV 183 Query: 166 DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225 D++V+NPPYI L EV + DP +L GG DG+ I R L G +V Sbjct: 184 DLVVANPPYIPEGA--ALDPEVAEHDPPQALFGGPDGMVVIDAIVGLAQRWLRSGGRVAV 241 Query: 226 E 226 E Sbjct: 242 E 242 >gi|294675035|ref|YP_003575651.1| modification methylase, HemK family [Prevotella ruminicola 23] gi|294472149|gb|ADE81538.1| modification methylase, HemK family [Prevotella ruminicola 23] Length = 291 Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 64/217 (29%), Positives = 95/217 (43%), Gaps = 5/217 (2%) Query: 16 GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75 GLS+ + + L + L + R K E + +LG DF + ++ PR Sbjct: 37 GLSTADIYCGKVTQLSANDQAELEKIMQRLEKAEPVQYVLGVADFCGRQFYVAPGVLIPR 96 Query: 76 PET-ELLVDSALAFSLPRIEKRDVVR---ILDLGTGTGAVCLALLKESPFFKGVGVDISC 131 PET EL F E + ++ +LD+GTG+G + + L + P K DIS Sbjct: 97 PETAELCHLIGEEFKGKLAEDKGKLKGCSVLDIGTGSGCIAITLALDIPDSKVTAWDISD 156 Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFD 191 +AL IA+ NA G +F+ + + +DVIVSNPPYI D + V ++ Sbjct: 157 EALAIARHNAQALGADVKFEKHDALALETEADRWDVIVSNPPYICRKEADEMEENVLKYE 216 Query: 192 PRISL-DGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227 P +L D L YR I L + G EI Sbjct: 217 PDTALFVPDDDPLLFYRHIMHYAKLALKQGGRLYYEI 253 >gi|257465494|ref|ZP_05629865.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Actinobacillus minor 202] gi|257451154|gb|EEV25197.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Actinobacillus minor 202] Length = 315 Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 45/143 (31%), Positives = 81/143 (56%), Gaps = 3/143 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 RILD+ TG+G + +A P + VD+S AL++A+ N + +S R + SD F+ Sbjct: 143 RILDMCTGSGCIAIACAVAFPEAEVDAVDLSLDALDVAQINIERHQLSHRVFPISSDLFN 202 Query: 160 SV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 + + +D+IV+NPPY++ +D + E F+P ++L G DGL+ + I + +L+ Sbjct: 203 DIPQDKYDLIVTNPPYVDQEDLDDMPEEFH-FEPELALGSGEDGLNITKRILAQAADYLS 261 Query: 219 KDGLCSVEIGYNQKVDVVRIFES 241 +G+ E+G N V ++ + S Sbjct: 262 DNGVLVCEVG-NSMVHLMEQYPS 283 >gi|238751946|ref|ZP_04613431.1| Uncharacterized adenine-specific methylase [Yersinia rohdei ATCC 43380] gi|238709780|gb|EEQ02013.1| Uncharacterized adenine-specific methylase [Yersinia rohdei ATCC 43380] Length = 310 Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 43/130 (33%), Positives = 68/130 (52%), Gaps = 2/130 (1%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ILD+ TG+G + +A P + VDIS L + + N +G+ + ++SD F Sbjct: 135 HILDMCTGSGCIAIACAYAFPEAEVDAVDISNDVLAVTEHNIQQHGMEHQVTPIRSDLFR 194 Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 + + +D+IV+NPPY+++ +D L E R F+P + L G DGL R I L Sbjct: 195 DLPPIKYDLIVTNPPYVDAEDMDDLPQEFR-FEPELGLAAGTDGLKLARRILACAPDFLK 253 Query: 219 KDGLCSVEIG 228 DG+ E+G Sbjct: 254 DDGVLICEVG 263 >gi|322815425|gb|EFZ24082.1| hypothetical protein TCSYLVIO_9800 [Trypanosoma cruzi] Length = 420 Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 55/206 (26%), Positives = 98/206 (47%), Gaps = 32/206 (15%) Query: 32 DRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSL 90 D R + A+++ + H+ + I+G + FY + S PRPETE+ + L Sbjct: 140 DAARRAVKKAVLQRVDLHKPLAYIIGNQPFYGCNIHCSPPLLCPRPETEMWTHWFVQRHL 199 Query: 91 PR--IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS- 147 R +++ ++R+LD+ GTG V +A+ P + V VD+ +A+++++ NA NG+ Sbjct: 200 SRATTDEKSLLRVLDMCCGTGCVGIAIAVHLPHTEVVAVDVMEEAVKVSEENARRNGIHV 259 Query: 148 ERFDTLQSDWF-------------SSVEGL---------------FDVIVSNPPYIESVI 179 R+ ++SD F S EG+ FD+IVSNPPY+ Sbjct: 260 SRYRAIKSDMFEAFVELDDTSSRGKSKEGMSENKKAQIADLHVGSFDIIVSNPPYVLPEQ 319 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSH 205 L ++ ++ +I+L G +H Sbjct: 320 YVQLHPGIKLWESKIALVGDAKRENH 345 >gi|260776468|ref|ZP_05885363.1| hypothetical adenine-specific methylase yfcB [Vibrio coralliilyticus ATCC BAA-450] gi|260607691|gb|EEX33956.1| hypothetical adenine-specific methylase yfcB [Vibrio coralliilyticus ATCC BAA-450] Length = 310 Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 41/134 (30%), Positives = 73/134 (54%), Gaps = 2/134 (1%) Query: 96 RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155 + RI+DL TG+G + +A P + +DIS AL++A+ N +G+ ++ ++S Sbjct: 131 EEPTRIMDLCTGSGCIAIACAHAFPDAEVDAIDISTDALQVAEQNVQDHGMEQQVFPIRS 190 Query: 156 DWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214 D F + + +++IVSNPPY++ ++ L E +P + L G DGL R I Sbjct: 191 DLFRDLPKEKYNLIVSNPPYVDQEDMNSLPDEFT-HEPELGLAAGTDGLKLVRRILANAP 249 Query: 215 RHLNKDGLCSVEIG 228 +L ++G+ E+G Sbjct: 250 DYLTENGILICEVG 263 >gi|37680619|ref|NP_935228.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Vibrio vulnificus YJ016] gi|320155710|ref|YP_004188089.1| ribosomal protein L3 methyltransferase [Vibrio vulnificus MO6-24/O] gi|326423914|ref|NP_760853.2| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Vibrio vulnificus CMCP6] gi|37199367|dbj|BAC95199.1| putative adenine-specific methylase [Vibrio vulnificus YJ016] gi|319931022|gb|ADV85886.1| ribosomal protein L3 methyltransferase [Vibrio vulnificus MO6-24/O] gi|319999291|gb|AAO10380.2| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Vibrio vulnificus CMCP6] Length = 310 Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 41/134 (30%), Positives = 72/134 (53%), Gaps = 2/134 (1%) Query: 96 RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155 + VRI+DL TG+G + +A P + +DIS AL +A+ N +G+ ++ ++S Sbjct: 131 EEPVRIMDLCTGSGCIAIACAHAFPEAEVDAIDISVDALAVAEQNIQDHGMEQQVFPIRS 190 Query: 156 DWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214 D F + + +++IV+NPPY++ ++ L E +P + L G DGL R I Sbjct: 191 DLFRDLPKEQYNIIVTNPPYVDEEDMNSLPTEFTH-EPALGLAAGTDGLKLVRRILANAP 249 Query: 215 RHLNKDGLCSVEIG 228 +L + G+ E+G Sbjct: 250 DYLTEKGILVCEVG 263 >gi|269219854|ref|ZP_06163708.1| protein-(glutamine-N5) methyltransferase [Actinomyces sp. oral taxon 848 str. F0332] gi|269210759|gb|EEZ77099.1| protein-(glutamine-N5) methyltransferase [Actinomyces sp. oral taxon 848 str. F0332] Length = 306 Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 74/258 (28%), Positives = 104/258 (40%), Gaps = 30/258 (11%) Query: 27 DSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL 86 D D+R F + A+ R E + I G F + L F RPETE + A+ Sbjct: 46 DPTPDERAMF--SRAVARRAAREPLQHITGRMYFRWLELVSRPGAFIVRPETEAVAQDAV 103 Query: 87 AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146 + ++ + R+LDL TG+GA+ LA+ E P VGVD S +AL++A+ N G Sbjct: 104 DEARRIADRGERPRVLDLCTGSGAIALAVATEVPGSAVVGVDASAEALQVARENNAAYGG 163 Query: 147 SERFDTLQSDWFS----------------------SVEGLFDVIVSNPPYIESVIVDC-L 183 F + FS G FDV+V+NPPY+ + C L Sbjct: 164 PVEFVLADALEFSCAHEPDVREDPGASESGALGSGGARGKFDVVVANPPYVPA---RCEL 220 Query: 184 GLEVRDFDPRISL-DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 EV DP +L GG DGL + + L GL +E Q + R+ Sbjct: 221 SPEVL-ADPAAALWGGGEDGLDMPNALVKKAAGLLKPGGLLVMEHAEEQAEPLRRLALKT 279 Query: 243 KLFLVNAFKDYGGNDRVL 260 D G R L Sbjct: 280 GFVKAETRADLAGRPRWL 297 >gi|254506930|ref|ZP_05119069.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Vibrio parahaemolyticus 16] gi|219550215|gb|EED27201.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Vibrio parahaemolyticus 16] Length = 310 Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 41/130 (31%), Positives = 72/130 (55%), Gaps = 2/130 (1%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 RI+DL TG+G + +A P + +DIS AL++A+ N +G+ ++ ++SD F Sbjct: 135 RIMDLCTGSGCIAIACAHAFPDAEVDAIDISTDALQVAEQNIQDHGMEQQVFPIRSDLFR 194 Query: 160 SV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 + + +++IVSNPPY++ ++ L E +P + L G DGL R I +L Sbjct: 195 DLPKEQYNLIVSNPPYVDEEDMNSLPEEFT-HEPELGLAAGTDGLKLVRRILANAPDYLT 253 Query: 219 KDGLCSVEIG 228 ++G+ E+G Sbjct: 254 ENGILICEVG 263 >gi|304390025|ref|ZP_07371979.1| HemK family modification methylase [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|304326507|gb|EFL93751.1| HemK family modification methylase [Mobiluncus curtisii subsp. curtisii ATCC 35241] Length = 290 Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 64/237 (27%), Positives = 101/237 (42%), Gaps = 16/237 (6%) Query: 34 QRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRI 93 QRFF + + + ++G F ++ L F RPETE + A+ + + Sbjct: 56 QRFF--ELVGQRATRVPLQHVMGIMYFRHLTLRARPGVFVVRPETEWVAQGAIDAAADWV 113 Query: 94 EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF--- 150 + R+LDLG G+GA+ L++ E P VD+S A+E+ NA GV+ R Sbjct: 114 RQGVAPRVLDLGCGSGALGLSIASEVPQSVLTSVDVSEAAVELTAENARFTGVAARVLHA 173 Query: 151 -----DTLQSDWF-SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL-DGGIDGL 203 TL++ + + F VI +NPPY +VD + DP+++L GG DGL Sbjct: 174 DATDPQTLRNALVCAEIPPQFHVIATNPPY----VVDPVTQPEAAQDPQLALYGGGTDGL 229 Query: 204 SHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 R + +E +Q +V+ E+ L D G R L Sbjct: 230 ERPRAFLAAAAAVALPGATIVMEHAESQGEALVKAAEALGLRGAQTRCDLAGRPRFL 286 >gi|315077779|gb|EFT49830.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes HL053PA2] Length = 291 Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 55/193 (28%), Positives = 87/193 (45%), Gaps = 8/193 (4%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ LC + Q+I DD RF + R E I+G F +RL Sbjct: 28 DARMLLCEALRIQPSQLIRVASVNADDEDRF--NQMVDRRRSGEPAQYIIGHAWFRGLRL 85 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 + F PR ETEL+ + ++ + + ++DL TGTGA+ LA+ E P + Sbjct: 86 EVGPGVFIPRLETELVAEQSIQEARRLVMSGACPSVIDLCTGTGAIALAVASEVPGSRVS 145 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCL 183 V++ AL + N +GV + L D + FDV+V+NPPY+ V + Sbjct: 146 AVEVDDAALTWTRRNLCDSGV----EVLAGDALRVPDDGRRFDVVVTNPPYLRRSDVSSI 201 Query: 184 GLEVRDFDPRISL 196 EV + +P ++L Sbjct: 202 PGEVTEHEPDLAL 214 >gi|294637237|ref|ZP_06715539.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Edwardsiella tarda ATCC 23685] gi|291089583|gb|EFE22144.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Edwardsiella tarda ATCC 23685] Length = 320 Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 43/130 (33%), Positives = 70/130 (53%), Gaps = 2/130 (1%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ILD+ TG+G + +A P + VDIS + LE+ + N +G+ ++ ++SD F Sbjct: 145 HILDMCTGSGCIAIACAYAFPEAEVDAVDISGEVLEVTEHNIQQHGLEQQVTPIRSDLFR 204 Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 + L +D+IV+NPPY++ + L E R +P + L G DGL R I +L+ Sbjct: 205 ELPALRYDLIVTNPPYVDEEDMSDLPDEFR-HEPELGLAAGSDGLKLVRRILACAPDYLS 263 Query: 219 KDGLCSVEIG 228 DG+ E+G Sbjct: 264 DDGVLICEVG 273 >gi|195091706|ref|XP_001997556.1| GH23445 [Drosophila grimshawi] gi|193905933|gb|EDW04800.1| GH23445 [Drosophila grimshawi] Length = 249 Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 49/165 (29%), Positives = 84/165 (50%), Gaps = 16/165 (9%) Query: 30 LDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFS 89 L D +RF L+H I+G DF ++ L + F PRPETE V Sbjct: 92 LADFERFLEARCARMPLQH-----IIGEWDFMDITLKTAPTVFIPRPETEEFV----RLV 142 Query: 90 LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 + ++ + V +L++G G+GA+ L++L P + ++ S A +A NA G+ +R Sbjct: 143 IDNYKRAEHVNMLEVGCGSGAMSLSMLHALPQVQATAIERSKAATALAWENAKLLGLQQR 202 Query: 150 FD----TLQSDWF---SSVEGLFDVIVSNPPYIESVIVDCLGLEV 187 F+ T+++D + S + +D+I+SNPPY+++ L EV Sbjct: 203 FEVHNHTMETDKYMPESLHDKRYDLIISNPPYVKTDEFQYLHPEV 247 >gi|322378890|ref|ZP_08053307.1| protoporphyrinogen oxidase (HemK) [Helicobacter suis HS1] gi|322380384|ref|ZP_08054590.1| protoporphyrinogen oxidase [Helicobacter suis HS5] gi|321147174|gb|EFX41868.1| protoporphyrinogen oxidase [Helicobacter suis HS5] gi|321148700|gb|EFX43183.1| protoporphyrinogen oxidase (HemK) [Helicobacter suis HS1] Length = 269 Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 54/195 (27%), Positives = 89/195 (45%), Gaps = 17/195 (8%) Query: 74 PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133 PRPETE+LV A I+ + ++++G G+G + ++L P + DI+ +A Sbjct: 86 PRPETEILVHQASEL----IQDYGIKNVVEVGIGSGVISVSLAMAHPKISILATDITMEA 141 Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRD--- 189 LE+A N T + R + Q+ V+ ++VSNPPY+ L + D Sbjct: 142 LEVASVNISTFNLQNRINLFQTSLLEGVDIKARTLVVSNPPYV------ALDYPLEDSVR 195 Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249 ++P I+L GG G + + D + K C E+G+N K + K + N Sbjct: 196 YEPEIALYGGEYGDEILKALIDQAANKRVKYLAC--EMGHNHKASLSEHL-GLKGYQANF 252 Query: 250 FKDYGGNDRVLLFCR 264 + DY DR + R Sbjct: 253 YTDYSDLDRGFVATR 267 >gi|315654796|ref|ZP_07907701.1| HemK family modification methylase [Mobiluncus curtisii ATCC 51333] gi|315490757|gb|EFU80377.1| HemK family modification methylase [Mobiluncus curtisii ATCC 51333] Length = 290 Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 64/237 (27%), Positives = 100/237 (42%), Gaps = 16/237 (6%) Query: 34 QRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRI 93 QRFF + + + ++G F ++ L F RPETE + A+ + + Sbjct: 56 QRFF--ELVGQRATRVPLQHVMGIMYFRHLTLHARPGVFVVRPETEWVAQGAIDAAADWV 113 Query: 94 EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF--- 150 + R+LDLG G+GA+ L++ E P VD+S A+E+ NA GV+ R Sbjct: 114 RQGVAPRVLDLGCGSGALGLSIASEVPQSVLTCVDVSEAAVELTAENARFTGVATRVLLA 173 Query: 151 -----DTLQSDWF-SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL-DGGIDGL 203 TL++ + + F VI +NPPY +VD + DP+++L GG DGL Sbjct: 174 DATDPQTLRNALVRAEIPPQFHVIATNPPY----VVDPVTQPEAAQDPQLALYGGGADGL 229 Query: 204 SHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 R +E +Q +V+ E+ L D G R L Sbjct: 230 ERPRAFLAAAVAVALPGATIVMEHAESQGEALVKAAEALGLRGAQTRCDLAGRPRFL 286 >gi|320011146|gb|ADW05996.1| modification methylase, HemK family [Streptomyces flavogriseus ATCC 33331] Length = 262 Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 57/189 (30%), Positives = 83/189 (43%), Gaps = 8/189 (4%) Query: 44 RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103 R H H +LGW +F +R+ + F PR TE LV A A + D ++D Sbjct: 49 REAGHPLEH-VLGWAEFCGLRIAVDPGVFVPRRRTEFLVRQAAALA------PDRAVVVD 101 Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG 163 L GTGA+ AL + D+ A+ A+ N G D L + ++ G Sbjct: 102 LCCGTGALGRALASTLRDVELHAADVEPAAVRCARRNVGALGTVHEGD-LFTPLPRALRG 160 Query: 164 LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223 DV+++N PY+ + V L E R +P ++LDGG DGL R + + L G Sbjct: 161 RVDVLLANVPYVPTGDVGLLPAEARVHEPLVALDGGGDGLDVMRRVVGEAADWLAPGGSL 220 Query: 224 SVEIGYNQK 232 VE Q Sbjct: 221 LVETSERQA 229 >gi|189501489|ref|YP_001957206.1| HemK family modification methylase [Candidatus Amoebophilus asiaticus 5a2] gi|189496930|gb|ACE05477.1| modification methylase, HemK family [Candidatus Amoebophilus asiaticus 5a2] Length = 285 Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 61/225 (27%), Positives = 103/225 (45%), Gaps = 10/225 (4%) Query: 37 FLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR 96 L + R +HE I ILG F N ++ PRPETE LV + + + Sbjct: 59 ILAEIVQRIHQHEPIQYILGEAPFMNRNFFVNPSVLIPRPETEELVQLII-----KENSK 113 Query: 97 DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 + ILD+GTG+G + + L K+ + G+DIS AL++A+SNA + + +Q++ Sbjct: 114 PGLHILDIGTGSGCIAITLAKDLSDAQVDGLDISEPALKVARSNA--QRLQANVNWIQAN 171 Query: 157 WFS-SVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG-LSHYRTIADGV 213 + G +D+IVSNPPY+ + + V ++P ++ + L Y I Sbjct: 172 ILQDPLPGRKWDIIVSNPPYVCLSEKEQMQQRVLAYEPAQAIFVSDEAPLIFYEQIIQLA 231 Query: 214 SRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258 S +L G +EI + + ++ + +D G DR Sbjct: 232 STYLQPTGKLYLEINERFGLALASKLADKQFNNIYIEQDLQGKDR 276 >gi|50842730|ref|YP_055957.1| putative methylase [Propionibacterium acnes KPA171202] gi|289428592|ref|ZP_06430276.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Propionibacterium acnes J165] gi|295130811|ref|YP_003581474.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Propionibacterium acnes SK137] gi|50840332|gb|AAT82999.1| putative methylase [Propionibacterium acnes KPA171202] gi|289158286|gb|EFD06505.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Propionibacterium acnes J165] gi|291377241|gb|ADE01096.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Propionibacterium acnes SK137] gi|313772061|gb|EFS38027.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes HL074PA1] gi|313791909|gb|EFS40010.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes HL110PA1] gi|313801609|gb|EFS42849.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes HL110PA2] gi|313807752|gb|EFS46239.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes HL087PA2] gi|313810261|gb|EFS47982.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes HL083PA1] gi|313818789|gb|EFS56503.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes HL046PA2] gi|313820561|gb|EFS58275.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes HL036PA1] gi|313822634|gb|EFS60348.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes HL036PA2] gi|313825433|gb|EFS63147.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes HL063PA1] gi|313830591|gb|EFS68305.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes HL007PA1] gi|313833627|gb|EFS71341.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes HL056PA1] gi|313838322|gb|EFS76036.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes HL086PA1] gi|314924926|gb|EFS88757.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes HL036PA3] gi|314960549|gb|EFT04651.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes HL002PA2] gi|314962565|gb|EFT06665.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes HL082PA1] gi|314973592|gb|EFT17688.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes HL053PA1] gi|314975814|gb|EFT19909.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes HL045PA1] gi|314978720|gb|EFT22814.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes HL072PA2] gi|314983707|gb|EFT27799.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes HL005PA1] gi|314987888|gb|EFT31979.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes HL005PA2] gi|314989699|gb|EFT33790.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes HL005PA3] gi|315080406|gb|EFT52382.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes HL078PA1] gi|315084735|gb|EFT56711.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes HL027PA2] gi|315085419|gb|EFT57395.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes HL002PA3] gi|315088523|gb|EFT60499.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes HL072PA1] gi|315095865|gb|EFT67841.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes HL038PA1] gi|315105833|gb|EFT77809.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes HL030PA1] gi|327326417|gb|EGE68207.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes HL096PA2] gi|327331708|gb|EGE73445.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes HL096PA3] gi|327443484|gb|EGE90138.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes HL013PA2] gi|327445687|gb|EGE92341.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes HL043PA2] gi|327448329|gb|EGE94983.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes HL043PA1] gi|327453372|gb|EGF00027.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes HL092PA1] gi|328754696|gb|EGF68312.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes HL020PA1] gi|328760892|gb|EGF74457.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes HL099PA1] Length = 291 Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 68/256 (26%), Positives = 110/256 (42%), Gaps = 9/256 (3%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ LC + Q+I DD RF + R E I+G F +RL Sbjct: 28 DARMLLCEALRIQPSQLIRVASVNADDEDRF--NQMVDRRRSGEPAQYIIGHAWFRGLRL 85 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 + F PR ETEL+ + ++ + + ++DL TGTGA+ LA+ E P + Sbjct: 86 EVGPGVFIPRLETELVAEQSIQEARRLVMSGACPSVIDLCTGTGAIALAVASEVPGSRVS 145 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCL 183 V++ AL + N +GV + L D + FDV+V+NPPY+ V + Sbjct: 146 AVEVDDAALTWTRRNLCDSGV----EVLAGDALRVPDDGRRFDVVVTNPPYLRRSDVSSI 201 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 EV + +P ++L G DGL + + L GL +E Q+ ++V + Sbjct: 202 PGEVTEHEPDLALFSGDDGLDLPLLLIGRAAELLTPGGLFVMEHDETQREELVAAMATSD 261 Query: 244 LF-LVNAFKDYGGNDR 258 ++ + D G R Sbjct: 262 MWEQIEDHDDLAGRPR 277 >gi|307330646|ref|ZP_07609785.1| modification methylase, HemK family [Streptomyces violaceusniger Tu 4113] gi|306883707|gb|EFN14754.1| modification methylase, HemK family [Streptomyces violaceusniger Tu 4113] Length = 272 Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 60/217 (27%), Positives = 95/217 (43%), Gaps = 15/217 (6%) Query: 31 DDRQRFFLTNA---------IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELL 81 +D R L A + R + +LGW +F +R+++ + F PR TE L Sbjct: 26 EDEARLILATARTPAGLLAMVDRRAAGLPLEHVLGWAEFRGLRISVDAGVFVPRRRTEFL 85 Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 V+ A+A + P ++DL G+GA+ AL + DI A+ A+ N Sbjct: 86 VEQAVALARPG------AVVVDLCCGSGALGAALASALSEVELYAADIDPVAVACARRNV 139 Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201 G + L +++ G DV+++N PY+ + V L E R + R++LDGG+D Sbjct: 140 EPAGGTVYEGDLYEPLPAALRGRVDVLLANVPYVPTEEVGLLPPEARVHEARVALDGGVD 199 Query: 202 GLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238 GL R + G R L G E Q + I Sbjct: 200 GLDVLRRVTAGAGRWLTPGGSLLFETSGRQAASAMDI 236 >gi|213964542|ref|ZP_03392742.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Corynebacterium amycolatum SK46] gi|213952735|gb|EEB64117.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Corynebacterium amycolatum SK46] Length = 314 Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 71/244 (29%), Positives = 109/244 (44%), Gaps = 23/244 (9%) Query: 31 DDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSL 90 D+ R L +VR + E + ILG ++ L + F PRPETELL A+ + Sbjct: 71 DEAGRKHLAEMLVRRVAREPLQHILGTAPMMSLELQVGPGVFVPRPETELLAQWAIDRAR 130 Query: 91 PRIEKRDV-VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG---- 145 + V +I+DL TG+GA+ LA+ P V V++S +A A N T G Sbjct: 131 ELVASGVVKPKIVDLCTGSGALALAIADAVPEADVVAVELSERARAWAAKNIETYGDGRV 190 Query: 146 --VSERFDTLQ--------SDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195 ++ Q +DW G D++VSNPPY+ + EVR DP + Sbjct: 191 RLIAGDVTDDQLIDDGGELADWV----GETDIVVSNPPYVPEDT--EVTPEVR-ADPHSA 243 Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL-VNAFKDYG 254 + GG DGL R + + V + G+ +E + DV + + + V +D+ Sbjct: 244 VFGGDDGLDVIRPMMNLVDALVRSGGVIGIEHDDSSGDDVSSLLKDTWDYADVEVRRDFA 303 Query: 255 GNDR 258 G DR Sbjct: 304 GRDR 307 >gi|299471450|emb|CBN79402.1| similar to HemK methyltransferase family member 1 isoform 1 [Ectocarpus siliculosus] Length = 332 Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 71/235 (30%), Positives = 104/235 (44%), Gaps = 55/235 (23%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV-- 99 ++R+++H + ++G DFY + L ++ T PRPETE LV+ L + P + V Sbjct: 29 VLRAVQHVPVQYLVGEWDFYGLTLEMAPPTLIPRPETEELVEMILKWLRPDVMNAIAVDR 88 Query: 100 ----------------------RILDLGTGTGAVCLALLKESPF-FKGVGVDISCKALEI 136 R LD+G+GTGA+ LALL E P + V VD A+ + Sbjct: 89 AADAPAAGGDGADSSSSDESGMRFLDVGSGTGALGLALLGELPSGARCVAVDTQESAVRL 148 Query: 137 AKSNAVTNGVSERFDTLQS--------------------DWFSSVE----------GLFD 166 ++ NA G+ R+ + SSVE G FD Sbjct: 149 SRRNAARTGLQARYSCFHAAVAELAPSEKGSVTTPAIDRPPRSSVEKGGREDLDLDGSFD 208 Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221 +VSNPPYI + ++ L +V D + ++LDGG DGL R I R L K G Sbjct: 209 FVVSNPPYIPTRDMEGLPRDVADHEDSVALDGGEDGLDVVRDIVRLCPRLLRKGG 263 >gi|227542609|ref|ZP_03972658.1| rRNA or tRNA methylase [Corynebacterium glucuronolyticum ATCC 51866] gi|227181807|gb|EEI62779.1| rRNA or tRNA methylase [Corynebacterium glucuronolyticum ATCC 51866] Length = 285 Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 62/219 (28%), Positives = 88/219 (40%), Gaps = 13/219 (5%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101 I R E + ILG F + L + F PRPETE+L D A+ K+ Sbjct: 66 IRRRATREPLQWILGTAPFGPLDLHVGPGVFIPRPETEILADWAV--------KQHAATY 117 Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN-GVSERFDTLQSDWFSS 160 DL TG+GA+ + P + V + S +A A+ N V N + DT Sbjct: 118 ADLCTGSGAIAAYIAHYVPAARVVAAEKSTEAARYARENGVDNLWCGDVLDTAACVSALD 177 Query: 161 VEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 EG FDV+VSNPPY+ +E DP ++ G DG+S +A L Sbjct: 178 PEGDGFDVVVSNPPYVPEAAEVSPEVEA---DPHDAVFAGEDGMSCIPQLAHTAFALLKP 234 Query: 220 DGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258 G VE + V + + +D+ G R Sbjct: 235 GGCFGVEHDDATQPAVCMSLQEAGFTHIEPMQDFAGKPR 273 >gi|86146091|ref|ZP_01064417.1| putative adenine-specific methylase [Vibrio sp. MED222] gi|218708869|ref|YP_002416490.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Vibrio splendidus LGP32] gi|85836038|gb|EAQ54170.1| putative adenine-specific methylase [Vibrio sp. MED222] gi|218321888|emb|CAV17875.1| Hypothetical adenine-specific methylase [Vibrio splendidus LGP32] Length = 310 Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 41/134 (30%), Positives = 72/134 (53%), Gaps = 2/134 (1%) Query: 96 RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155 + RI+D+ TG+G + +A P + +DIS AL++A+ N +G+ ++ ++S Sbjct: 131 EEPTRIMDMCTGSGCIAIACAHAFPDAEVDAIDISTDALQVAEQNVQDHGMEQQVFPIRS 190 Query: 156 DWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214 D F + + +++IVSNPPY++ ++ L E +P + L G DGL R I Sbjct: 191 DLFRDLPKEKYNLIVSNPPYVDEEDMNSLPDEFT-HEPELGLAAGTDGLKLVRRILANAP 249 Query: 215 RHLNKDGLCSVEIG 228 +L DG+ E+G Sbjct: 250 DYLTDDGILICEVG 263 >gi|326441030|ref|ZP_08215764.1| putative methylase [Streptomyces clavuligerus ATCC 27064] Length = 289 Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 58/195 (29%), Positives = 84/195 (43%), Gaps = 5/195 (2%) Query: 38 LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97 LT + R E + +LGW F R + F PRP + LV+ ALA + Sbjct: 27 LTELVARRGSGEPLEHVLGWAAFRGGRFAVDPGVFVPRPRSAFLVERALALA-----PGA 81 Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 ++DL G+GA+ AL E + DI A+ A+ N G + L + Sbjct: 82 GAVVVDLCCGSGALGAALTAELGGAELHAADIDPAAVRCARRNVRALGGTVYEGDLCAPL 141 Query: 158 FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217 + G DV+++N PY+ + + L E R + I+LDGG DGL R +A R L Sbjct: 142 PDRLRGRVDVLLANVPYVPTGEIALLPAEARVHEAAIALDGGTDGLDVLRRVAAEAGRWL 201 Query: 218 NKDGLCSVEIGYNQK 232 G E G Q Sbjct: 202 APGGSLLFETGERQS 216 >gi|260890430|ref|ZP_05901693.1| protein-(glutamine-N5) methyltransferase [Leptotrichia hofstadii F0254] gi|260860050|gb|EEX74550.1| protein-(glutamine-N5) methyltransferase [Leptotrichia hofstadii F0254] Length = 378 Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 69/220 (31%), Positives = 100/220 (45%), Gaps = 10/220 (4%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV--------RIL 102 + +L ++FY + + PR +TE+LV+ + I K + +IL Sbjct: 156 VQYLLNEQEFYGRKFYVDRGVLIPRQDTEVLVEKMIEILKNNILKNKNLEKNLKIHPKIL 215 Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162 D+G G+G + + E +GVDIS KALE A+ N VS L+S+ F ++E Sbjct: 216 DIGVGSGIIGITAALEIKDSYVLGVDISEKALETAEKNKELLKVS-NIKFLKSNLFENIE 274 Query: 163 -GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221 FD+IVSNPPYI + + +P +L DGL Y I +L G Sbjct: 275 FKQFDMIVSNPPYISLNEAGIMSDDTLLHEPSEALFAENDGLYFYYEICQKALDYLADFG 334 Query: 222 LCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 EIGY Q +V I S V KD G DRV++ Sbjct: 335 YLLFEIGYKQGKNVAEIMTSSGFKNVEVIKDLAGLDRVVV 374 >gi|119476715|ref|ZP_01617025.1| probable DNA methylase [marine gamma proteobacterium HTCC2143] gi|119449971|gb|EAW31207.1| probable DNA methylase [marine gamma proteobacterium HTCC2143] Length = 311 Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 46/150 (30%), Positives = 80/150 (53%), Gaps = 3/150 (2%) Query: 91 PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150 P ++ ++V ILDL +G G + +A + VD+S AL++A N + R Sbjct: 125 PWLQHQEVFEILDLCSGGGCIGIACAHYFEEAQVSLVDLSAPALQVAVENIQRFELPHRV 184 Query: 151 DTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209 +QSD F+ + G + +IV+NPPY++ V + + E +P+++L G DGL R I Sbjct: 185 SVIQSDLFTGLVGRTYQLIVANPPYVDGVDLQTMPAEYHH-EPQLALGSGDDGLDITRRI 243 Query: 210 ADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 + +L ++G+ VE+G N V + + F Sbjct: 244 LQQSADYLTEEGILVVEVG-NSGVALEQAF 272 >gi|323491461|ref|ZP_08096645.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Vibrio brasiliensis LMG 20546] gi|323314330|gb|EGA67410.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Vibrio brasiliensis LMG 20546] Length = 310 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 41/134 (30%), Positives = 72/134 (53%), Gaps = 2/134 (1%) Query: 96 RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155 + RI+DL TG+G + +A P + +DIS AL++A+ N +G+ ++ ++S Sbjct: 131 EEPTRIMDLCTGSGCIAIACAHAFPEAEVDAIDISTDALQVAEQNVQDHGMEQQVFPIRS 190 Query: 156 DWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214 D F + + +++IVSNPPY++ ++ L E +P + L G DGL R I Sbjct: 191 DLFRDLPKEKYNLIVSNPPYVDEEDMNSLPDEFT-HEPELGLAAGTDGLKLVRRILANAP 249 Query: 215 RHLNKDGLCSVEIG 228 +L +G+ E+G Sbjct: 250 DYLTDNGILICEVG 263 >gi|254389027|ref|ZP_05004257.1| modification methylase [Streptomyces clavuligerus ATCC 27064] gi|294812516|ref|ZP_06771159.1| Putative methylase [Streptomyces clavuligerus ATCC 27064] gi|197702744|gb|EDY48556.1| modification methylase [Streptomyces clavuligerus ATCC 27064] gi|294325115|gb|EFG06758.1| Putative methylase [Streptomyces clavuligerus ATCC 27064] Length = 314 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 58/195 (29%), Positives = 84/195 (43%), Gaps = 5/195 (2%) Query: 38 LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97 LT + R E + +LGW F R + F PRP + LV+ ALA + Sbjct: 52 LTELVARRGSGEPLEHVLGWAAFRGGRFAVDPGVFVPRPRSAFLVERALALA-----PGA 106 Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 ++DL G+GA+ AL E + DI A+ A+ N G + L + Sbjct: 107 GAVVVDLCCGSGALGAALTAELGGAELHAADIDPAAVRCARRNVRALGGTVYEGDLCAPL 166 Query: 158 FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217 + G DV+++N PY+ + + L E R + I+LDGG DGL R +A R L Sbjct: 167 PDRLRGRVDVLLANVPYVPTGEIALLPAEARVHEAAIALDGGTDGLDVLRRVAAEAGRWL 226 Query: 218 NKDGLCSVEIGYNQK 232 G E G Q Sbjct: 227 APGGSLLFETGERQS 241 >gi|302865840|ref|YP_003834477.1| modification methylase, HemK family [Micromonospora aurantiaca ATCC 27029] gi|302568699|gb|ADL44901.1| modification methylase, HemK family [Micromonospora aurantiaca ATCC 27029] Length = 263 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 62/211 (29%), Positives = 94/211 (44%), Gaps = 14/211 (6%) Query: 38 LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97 LT + R + + +LGW +F R+ + F PR T LLVD+A A + Sbjct: 42 LTRLVDRRVAGLPLEHLLGWAEFCGRRIAVHPGVFVPRGRTALLVDAAAALAG------P 95 Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 +LDL G+GA + L + DI A+ A+ N GV Q D Sbjct: 96 APVVLDLCCGSGAAAVVLHERLTPRWLAAADIDPVAVACARRNLEPLGVP----VYQGDL 151 Query: 158 FSSVE----GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213 F ++ G D++V+N PY+ + V L E R ++ ++LDGG DGL+ R +A G Sbjct: 152 FDALPAGRRGTLDLVVANAPYVPTAAVASLPAEARLYEAPVALDGGTDGLAVLRRVASGA 211 Query: 214 SRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 + L G VE Q ++ F + L Sbjct: 212 AEWLAPGGHVVVESSVAQAPELCAAFTAVGL 242 >gi|240949667|ref|ZP_04754002.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Actinobacillus minor NM305] gi|240295925|gb|EER46601.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Actinobacillus minor NM305] Length = 315 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 44/143 (30%), Positives = 81/143 (56%), Gaps = 3/143 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 RILD+ TG+G + +A P + VD+S AL++A+ N + +S R + SD F+ Sbjct: 143 RILDMCTGSGCIAIACAVAFPDAEVDAVDLSLDALDVAQINIERHQLSHRVFPISSDLFN 202 Query: 160 SV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 + + +D+IV+NPPY++ +D + E F+P ++L G DGL+ + I + +L+ Sbjct: 203 DIPQDKYDLIVTNPPYVDQEDLDDMPEEFH-FEPELALGSGEDGLNITKRILAQAADYLS 261 Query: 219 KDGLCSVEIGYNQKVDVVRIFES 241 +G+ E+G N + ++ + S Sbjct: 262 DNGVLVCEVG-NSMIHLMEQYPS 283 >gi|163801892|ref|ZP_02195789.1| N5-glutamine methyltransferase [Vibrio sp. AND4] gi|159174400|gb|EDP59204.1| N5-glutamine methyltransferase [Vibrio sp. AND4] Length = 310 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 41/134 (30%), Positives = 72/134 (53%), Gaps = 2/134 (1%) Query: 96 RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155 + RI+DL TG+G + +A P + +DIS AL++A+ N +G+ ++ ++S Sbjct: 131 EEPTRIMDLCTGSGCIAIACAHAFPDAEVDAIDISTDALQVAEQNVQDHGMEQQVFPIRS 190 Query: 156 DWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214 D F + + +++IVSNPPY++ ++ L E +P + L G DGL R I Sbjct: 191 DLFRDLAKEQYNLIVSNPPYVDEEDMNSLPDEFT-HEPELGLAAGTDGLKLVRRILANAP 249 Query: 215 RHLNKDGLCSVEIG 228 +L +G+ E+G Sbjct: 250 DYLTDNGILVCEVG 263 >gi|86149778|ref|ZP_01068007.1| modification methylase, HemK family [Campylobacter jejuni subsp. jejuni CF93-6] gi|85839596|gb|EAQ56856.1| modification methylase, HemK family [Campylobacter jejuni subsp. jejuni CF93-6] Length = 271 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 70/254 (27%), Positives = 115/254 (45%), Gaps = 21/254 (8%) Query: 11 LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70 LC + ++ D +D F L I R E I DF+ + + Sbjct: 25 LCEYLKKDKAWLFLNQDIQIDHEPYFEL---IKRFKSGEPFEYIFEKVDFWGLEFKIKKG 81 Query: 71 TFEPRPETELLVDSALAFSLPRIEKRDVVR-ILDLGTGTGAVCLALLKESPFFKGVGVDI 129 PR ++E+L+ F + + K++ IL++G G+G + + L KE K DI Sbjct: 82 ILIPRYDSEILL-----FQILNLCKKNTFNGILEIGFGSGILSIVLAKELGL-KITACDI 135 Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE-SVIVDCLGLEVR 188 + KALE+A NA + V D + F ++ +D I SNPPYI+ S +D + Sbjct: 136 NPKALELALENAKLHKVDHLIDFKLCN-FKQIKENYDFIFSNPPYIKNSYPIDIWVQK-- 192 Query: 189 DFDPRISLDGGIDGLSHYRTIADGVSRHLNKD-GLCSVEIGYNQKVDVVRIFESRKLFLV 247 +P+ +L GG G Y + + + L+K + E GY+QK + +I F+V Sbjct: 193 --EPKEALFGGEKG---YEILEEIIHFSLDKKVKFLACEFGYDQKEILEKILYQNN-FIV 246 Query: 248 NAFKDYGGNDRVLL 261 + FKD G +R + Sbjct: 247 DFFKDEQGYNRAFI 260 >gi|88596994|ref|ZP_01100230.1| modification methylase, HemK family [Campylobacter jejuni subsp. jejuni 84-25] gi|218562361|ref|YP_002344140.1| putative DNA methylase [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|88190683|gb|EAQ94656.1| modification methylase, HemK family [Campylobacter jejuni subsp. jejuni 84-25] gi|112360067|emb|CAL34859.1| putative DNA methylase [Campylobacter jejuni subsp. jejuni NCTC 11168] Length = 271 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 70/254 (27%), Positives = 115/254 (45%), Gaps = 21/254 (8%) Query: 11 LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70 LC + ++ D +D F L I R E I DF+ + + Sbjct: 25 LCEYLKKDKAWLFLNQDIKIDHEPYFEL---IKRFKSGEPFEYIFEKVDFWGLEFKIKKG 81 Query: 71 TFEPRPETELLVDSALAFSLPRIEKRDVVR-ILDLGTGTGAVCLALLKESPFFKGVGVDI 129 PR ++E+L+ F + + K++ IL++G G+G + + L KE K DI Sbjct: 82 ILIPRYDSEILL-----FQILNLCKKNTFNGILEIGFGSGILSIVLAKELGL-KITACDI 135 Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE-SVIVDCLGLEVR 188 + KALE+A NA + V D + F ++ +D I SNPPYI+ S +D + Sbjct: 136 NPKALELALENAQLHKVDHLIDFKLCN-FKQIKENYDFIFSNPPYIKNSYPIDIWVQK-- 192 Query: 189 DFDPRISLDGGIDGLSHYRTIADGVSRHLNKD-GLCSVEIGYNQKVDVVRIFESRKLFLV 247 +P+ +L GG G Y + + + L+K + E GY+QK + +I F+V Sbjct: 193 --EPKEALFGGEKG---YEILEEIIHFSLDKKVKFLACEFGYDQKEILEKILYQNN-FIV 246 Query: 248 NAFKDYGGNDRVLL 261 + FKD G +R + Sbjct: 247 DFFKDEQGYNRAFI 260 >gi|57237024|ref|YP_178826.1| HemK family modification methylase [Campylobacter jejuni RM1221] gi|57165828|gb|AAW34607.1| modification methylase, HemK family [Campylobacter jejuni RM1221] gi|315058185|gb|ADT72514.1| Methylase, HemK [Campylobacter jejuni subsp. jejuni S3] Length = 271 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 69/255 (27%), Positives = 116/255 (45%), Gaps = 23/255 (9%) Query: 11 LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKH-ESIHRILGWRDFYNVRLTLSS 69 LC + ++ D +D F ++R K E I DF+ + + Sbjct: 25 LCEYLKKDKAWLFLNQDIQIDHEPYF----KLIRRFKSGEPFEYIFEKVDFWGLEFKIKK 80 Query: 70 DTFEPRPETELLVDSALAFSLPRIEKRDVVR-ILDLGTGTGAVCLALLKESPFFKGVGVD 128 PR ++E+L+ F + + K++ IL++G G+G + + L KE K D Sbjct: 81 GILIPRYDSEILL-----FQILNLCKKNTFNGILEIGFGSGILSIILAKELGL-KITACD 134 Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE-SVIVDCLGLEV 187 I+ KALE+A NA + V D + F ++ +D I SNPPYI+ S +D + Sbjct: 135 INLKALELALENAKLHKVDHLIDFKLCN-FKQIKENYDFIFSNPPYIKNSYPIDIWVQK- 192 Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD-GLCSVEIGYNQKVDVVRIFESRKLFL 246 +P+ +L GG G Y + + + L+K + E GY+QK + +I F+ Sbjct: 193 ---EPKEALFGGEKG---YEILEEIIHFSLDKKVKFLACEFGYDQKEILEKILYQNN-FI 245 Query: 247 VNAFKDYGGNDRVLL 261 V+ FKD G +R + Sbjct: 246 VDFFKDEQGYNRAFV 260 >gi|241662926|ref|YP_002981286.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Ralstonia pickettii 12D] gi|240864953|gb|ACS62614.1| modification methylase, HemK family [Ralstonia pickettii 12D] Length = 300 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 53/177 (29%), Positives = 83/177 (46%), Gaps = 8/177 (4%) Query: 91 PRIEKRD-VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 P I++ D +L+L TG+G + + + P VD+S AL +A N + +R Sbjct: 126 PWIDQEDGPTDVLELCTGSGCLSILAALQWPNSTIDAVDLSPDALVVANRNVDEYHLQDR 185 Query: 150 FDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207 + D ++ + +DVI++NPPY+ + L E R +P ++L GG DG+ R Sbjct: 186 IRLHEGDLYAPLPPGVHYDVILTNPPYVNEASMQALPPEYR-AEPHMALAGGNDGMDIVR 244 Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 I RHL G+ VEIG N++ +V F L G D+V L R Sbjct: 245 RILADAPRHLKPHGVLVVEIG-NERENVEAAFPDLDLVW---LPTSAGEDQVFLVTR 297 >gi|313665081|ref|YP_004046952.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Mycoplasma leachii PG50] gi|312949565|gb|ADR24161.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Mycoplasma leachii PG50] Length = 282 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 66/243 (27%), Positives = 112/243 (46%), Gaps = 33/243 (13%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D + L + + ++ + D VL +Q + L K + IL + FY+ Sbjct: 23 DVYHILEHILNKNYQWIVSNLDYVLTKKQLYKLDQIWKLLEKKYPLAYILKNKYFYSNNF 82 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAV---CLALLKESPFF 122 ++ D PR E+EL++D F I+ + + I+DL TG+G + C L K++ Sbjct: 83 FINKDVLIPRSESELIIDYVSEF----IKNNNNLLIVDLCTGSGCLGISCALLNKQN--- 135 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF-----------DVIVSN 171 K + DIS KAL++A N +RF+ + + + G F +VI+SN Sbjct: 136 KVILTDISYKALKVANKNI------KRFNLKNT---TCLSGDFINVLIKDNIKANVIISN 186 Query: 172 PPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR--HLNKDGLCSVEIGY 229 PPYI+ + L V +++P I+L GL Y + + + +NK L +E G+ Sbjct: 187 PPYID-INDQNLDKNVIEYEPSIALFAPNKGLYFYEILIKNIDKIVDVNKKFLIVLEFGW 245 Query: 230 NQK 232 QK Sbjct: 246 LQK 248 >gi|304398259|ref|ZP_07380133.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Pantoea sp. aB] gi|304354125|gb|EFM18498.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Pantoea sp. aB] Length = 310 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 45/141 (31%), Positives = 76/141 (53%), Gaps = 3/141 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ILD+ TG+G + +A P + VDIS AL +A+ N +G+ + +++D F Sbjct: 135 HILDMCTGSGCIAIACAYAFPEAEVDAVDISTGALAVAEQNIEEHGLIHQVTPIRADLFR 194 Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 + L +D+IV+NPPY+++ +D L E R +P + L G DGL R I +L+ Sbjct: 195 ELPQLKYDLIVTNPPYVDAEDMDDLPNEYR-HEPELGLAAGSDGLKLVRRILACAPDYLS 253 Query: 219 KDGLCSVEIGYNQKVDVVRIF 239 + G+ E+G N V ++ + Sbjct: 254 EQGVLVCEVG-NSMVHMIEQY 273 >gi|315930593|gb|EFV09625.1| methyltransferase, HemK family protein [Campylobacter jejuni subsp. jejuni 305] Length = 264 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 70/254 (27%), Positives = 115/254 (45%), Gaps = 21/254 (8%) Query: 11 LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70 LC + ++ D +D F L I R E I DF+ + + Sbjct: 18 LCEYLKKDKAWLFLNQDIKIDHEPYFEL---IKRFKSGEPFEYIFEKVDFWGLEFKIKKG 74 Query: 71 TFEPRPETELLVDSALAFSLPRIEKRDVVR-ILDLGTGTGAVCLALLKESPFFKGVGVDI 129 PR ++E+L+ F + + K++ IL++G G+G + + L KE K DI Sbjct: 75 ILIPRYDSEILL-----FQILNLCKKNTFNGILEIGFGSGILSIVLAKELGL-KITACDI 128 Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE-SVIVDCLGLEVR 188 + KALE+A NA + V D + F ++ +D I SNPPYI+ S +D + Sbjct: 129 NPKALELALENAQLHKVDHLIDFKLCN-FKQIKENYDFIFSNPPYIKNSYPIDIWVQK-- 185 Query: 189 DFDPRISLDGGIDGLSHYRTIADGVSRHLNKD-GLCSVEIGYNQKVDVVRIFESRKLFLV 247 +P+ +L GG G Y + + + L+K + E GY+QK + +I F+V Sbjct: 186 --EPKEALFGGEKG---YEILEEIIHFSLDKKVKFLACEFGYDQKEILEKILYQNN-FIV 239 Query: 248 NAFKDYGGNDRVLL 261 + FKD G +R + Sbjct: 240 DFFKDEQGYNRAFI 253 >gi|227487968|ref|ZP_03918284.1| protoporphyrinogen oxidase HemK [Corynebacterium glucuronolyticum ATCC 51867] gi|227092059|gb|EEI27371.1| protoporphyrinogen oxidase HemK [Corynebacterium glucuronolyticum ATCC 51867] Length = 285 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 61/217 (28%), Positives = 87/217 (40%), Gaps = 13/217 (5%) Query: 44 RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103 R E + ILG F + L + F PRPETE+L D A+ K+ D Sbjct: 68 RRATREPLQWILGTAPFGPLDLHVGPGVFIPRPETEILADWAV--------KQHAATYAD 119 Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN-GVSERFDTLQSDWFSSVE 162 L TG+GA+ + P + V + S +A A+ N V N + DT E Sbjct: 120 LCTGSGAIAAYIAHYVPAARVVAAEKSTEAARYARENGVDNLWCGDVLDTAACVSALDPE 179 Query: 163 G-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221 G FDV+VSNPPY+ +E DP ++ G DG+S +A L G Sbjct: 180 GDGFDVVVSNPPYVPEAAEVSPEVEA---DPHDAVFAGEDGMSCIPQLAHTAFALLKPGG 236 Query: 222 LCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258 VE + V + + +D+ G R Sbjct: 237 CFGVEHDDATQPAVCMSLQEAGFTHIEPMQDFAGKPR 273 >gi|226304213|ref|YP_002764171.1| methyltransferase [Rhodococcus erythropolis PR4] gi|226183328|dbj|BAH31432.1| methyltransferase [Rhodococcus erythropolis PR4] Length = 264 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 59/207 (28%), Positives = 89/207 (42%), Gaps = 16/207 (7%) Query: 44 RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103 R + E + +LGW +F +R+ + S F PR TE L A + + ++D Sbjct: 52 RRVAGEPLEPVLGWVEFCGLRIHIDSGVFVPRRRTEFLARQACSLVV------SGSVVVD 105 Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE- 162 + G+GAV L VD+ A+ A+ N ++ L+ D F + Sbjct: 106 MCCGSGAVGTVLQSTLDAVDLYAVDVEPAAVRCARRN-----ITPPERVLEGDLFEPLPT 160 Query: 163 ---GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 G DV+V+N PY+ + + + E R +P +SLDGG DGL R I + L Sbjct: 161 ELLGRVDVVVANAPYVPTDSIRLMPPEARLHEPLVSLDGGTDGLDLQRRIIADAAPWLRP 220 Query: 220 DGLCSVEIGYNQKVDVVRIFESRKLFL 246 G VE Q V F +R FL Sbjct: 221 GGCLLVETSTEQVEMTVETF-TRGGFL 246 >gi|304414084|ref|ZP_07395452.1| N5-glutamine methyltransferase [Candidatus Regiella insecticola LSR1] gi|304283298|gb|EFL91694.1| N5-glutamine methyltransferase [Candidatus Regiella insecticola LSR1] Length = 357 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 51/167 (30%), Positives = 82/167 (49%), Gaps = 7/167 (4%) Query: 74 PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133 PR L++ A LPR K ILDL TG+G + +A VDIS + Sbjct: 160 PRSPIGELINKKFATLLPRTPKH----ILDLCTGSGCIAIACAHAFAQADIDAVDISEEV 215 Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDP 192 L + + N + V ++ + SD F ++ + +D+IV+NPPY+++ + L E F+P Sbjct: 216 LAVTEYNIQQHAVEQQVTPILSDLFHALPPIQYDLIVTNPPYVDTEDMANLPPEFC-FEP 274 Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 ++ L G DGL R I L DG+ E+G N + ++R + Sbjct: 275 KLGLAAGEDGLELVRRILAWAPDFLQDDGVLICEVG-NSMMHLIRQY 320 >gi|296109428|ref|YP_003616377.1| methylase [Methanocaldococcus infernus ME] gi|295434242|gb|ADG13413.1| methylase [Methanocaldococcus infernus ME] Length = 191 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 53/165 (32%), Positives = 83/165 (50%), Gaps = 21/165 (12%) Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 ++L D +EP ++ LL L I R+LD+GTGTG + +A S Sbjct: 1 MKLIYDKDVYEPAEDSYLL--------LKNIVDVKGKRVLDVGTGTGILAIA----SALK 48 Query: 123 KGV--GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180 G+ G+DI+ KA+E+AK NA NGV +F S+ F +V+G +DVI+ NPPY+ + Sbjct: 49 GGIVEGIDINPKAIELAKKNAKLNGVKVKF--YLSNLFENVKGKYDVILFNPPYLPTEED 106 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225 D + + + DGG +G D V +L + G+ + Sbjct: 107 DKIEGYL-----NYAFDGGKEGREILDRFIDQVPNYLKEGGVVQL 146 >gi|205355564|ref|ZP_03222335.1| putative DNA methylase [Campylobacter jejuni subsp. jejuni CG8421] gi|205346798|gb|EDZ33430.1| putative DNA methylase [Campylobacter jejuni subsp. jejuni CG8421] Length = 264 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 69/255 (27%), Positives = 116/255 (45%), Gaps = 23/255 (9%) Query: 11 LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKH-ESIHRILGWRDFYNVRLTLSS 69 LC + + ++ D +D F ++R K E I DF+ + + Sbjct: 18 LCEYLKKNKAWLFLNQDIKIDHEPYF----ELIRRFKSGEPFEYIFEKVDFWGLEFKIKK 73 Query: 70 DTFEPRPETELLVDSALAFSLPRIEKRDVVR-ILDLGTGTGAVCLALLKESPFFKGVGVD 128 PR ++E+L+ F + + K++ IL++G G+G + + L KE K D Sbjct: 74 GVLIPRYDSEILL-----FQILNLCKKNTFNGILEIGFGSGILSIVLAKELGL-KITACD 127 Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE-SVIVDCLGLEV 187 I+ KALE+A NA + V D + F ++ +D I SNPPYI+ S +D + Sbjct: 128 INPKALELALENAKLHKVDHLIDFKLCN-FKQIKENYDFIFSNPPYIKNSYPIDIWVQK- 185 Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD-GLCSVEIGYNQKVDVVRIFESRKLFL 246 +P+ +L GG G Y + + L+K + E GY+QK + +I F+ Sbjct: 186 ---EPKEALFGGEKG---YEILEKIIHFSLDKKVKFLACEFGYDQKEILEKILYQNN-FI 238 Query: 247 VNAFKDYGGNDRVLL 261 V+ FKD G +R + Sbjct: 239 VDFFKDEQGYNRAFI 253 >gi|288926890|ref|ZP_06420790.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Prevotella buccae D17] gi|288336329|gb|EFC74710.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Prevotella buccae D17] Length = 280 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 60/200 (30%), Positives = 88/200 (44%), Gaps = 12/200 (6%) Query: 38 LTNAIVRSLKH-ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR 96 L IVR L+ E + +LG F + PRPETE+L+ L + Sbjct: 44 LLEEIVRRLETGEPVQYVLGEAPFCGRNFHVEPGVLIPRPETEMLL--PLICKAAKASPS 101 Query: 97 DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD----- 151 V ILD+GTG+G + + + P + DIS KAL IA++NA G F+ Sbjct: 102 SPVTILDIGTGSGCIAITASLKLPEAQVTAWDISDKALHIAQNNAERLGARVTFEKQNAL 161 Query: 152 TLQSDWFSSV---EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL-DGGIDGLSHYR 207 T D+ + +D+IVSNPPYI + V D++P ++L L Y+ Sbjct: 162 TAAEDYIDNTFPGSRQYDIIVSNPPYIAERERKNMDPNVLDYEPTVALFVPDATPLLFYK 221 Query: 208 TIADGVSRHLNKDGLCSVEI 227 I+ + L G EI Sbjct: 222 AISHYAVKALKPSGCLLFEI 241 >gi|187928350|ref|YP_001898837.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Ralstonia pickettii 12J] gi|187725240|gb|ACD26405.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Ralstonia pickettii 12J] Length = 300 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 53/177 (29%), Positives = 83/177 (46%), Gaps = 8/177 (4%) Query: 91 PRIEKRD-VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 P I++ D +L+L TG+G + + + P VD+S AL +A N + +R Sbjct: 126 PWIDQEDGPTDVLELCTGSGCLSILAALQWPNATIDAVDLSPDALVVANRNVDEYRLQDR 185 Query: 150 FDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207 + D ++ + +DVI++NPPY+ + L E R +P ++L GG DG+ R Sbjct: 186 IRLHEGDLYAPLPPGVHYDVILTNPPYVNEASMQALPPEYR-AEPHMALAGGNDGMDIVR 244 Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 I RHL G+ VEIG N++ +V F L G D+V L R Sbjct: 245 RILADAPRHLKPHGVLVVEIG-NERENVEAAFPDLDLVW---LPTSAGEDQVFLVTR 297 >gi|91223592|ref|ZP_01258857.1| putative adenine-specific methylase [Vibrio alginolyticus 12G01] gi|262393635|ref|YP_003285489.1| hypothetical adenine-specific methylase yfcB [Vibrio sp. Ex25] gi|91191678|gb|EAS77942.1| putative adenine-specific methylase [Vibrio alginolyticus 12G01] gi|262337229|gb|ACY51024.1| hypothetical adenine-specific methylase yfcB [Vibrio sp. Ex25] Length = 310 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 41/134 (30%), Positives = 72/134 (53%), Gaps = 2/134 (1%) Query: 96 RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155 + RI+DL TG+G + +A P + +DIS AL++A+ N +G+ ++ ++S Sbjct: 131 EEPTRIMDLCTGSGCIAIACAHAFPEAEVDAIDISTDALQVAEQNVQDHGMEQQVFPIRS 190 Query: 156 DWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214 D F + + +++IVSNPPY++ ++ L E +P + L G DGL R I Sbjct: 191 DLFRDLPKEKYNLIVSNPPYVDEEDMNSLPDEFT-HEPELGLAAGTDGLKLVRRILANAP 249 Query: 215 RHLNKDGLCSVEIG 228 +L +G+ E+G Sbjct: 250 DYLTDNGILICEVG 263 >gi|312884896|ref|ZP_07744586.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Vibrio caribbenthicus ATCC BAA-2122] gi|309367373|gb|EFP94935.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Vibrio caribbenthicus ATCC BAA-2122] Length = 310 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 45/143 (31%), Positives = 77/143 (53%), Gaps = 5/143 (3%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 +RI+D+ TG+G + +A P + +DIS AL++A+ N +G+ ++ ++SD F Sbjct: 134 IRIMDMCTGSGCIAIACAHAFPEAEVDAIDISADALDVAEENIQDHGMEQQVFPIRSDLF 193 Query: 159 S--SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216 +VE +++IVSNPPY++ ++ L E +P + L G DGL R I + Sbjct: 194 RDLTVEK-YNLIVSNPPYVDQEDMNSLPDEFT-HEPELGLAAGTDGLKLVRRILANAPDY 251 Query: 217 LNKDGLCSVEIGYNQKVDVVRIF 239 L GL E+G N V ++ + Sbjct: 252 LTDKGLLICEVG-NSMVHMIEQY 273 >gi|308187642|ref|YP_003931773.1| adenine-specific methylase [Pantoea vagans C9-1] gi|308058152|gb|ADO10324.1| putative adenine-specific methylase [Pantoea vagans C9-1] Length = 340 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 45/141 (31%), Positives = 76/141 (53%), Gaps = 3/141 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ILD+ TG+G + +A P + VDIS AL +A+ N +G+ + +++D F Sbjct: 165 HILDMCTGSGCIAIACAYAFPEAEVDAVDISTGALAVAEQNIEEHGLIHQVTPIRADLFR 224 Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 + L +D+IV+NPPY+++ +D L E R +P + L G DGL R I +L+ Sbjct: 225 ELPQLKYDLIVTNPPYVDAEDMDDLPNEYR-HEPELGLAAGSDGLKLVRRILACAPDYLS 283 Query: 219 KDGLCSVEIGYNQKVDVVRIF 239 + G+ E+G N V ++ + Sbjct: 284 EQGVLVCEVG-NSMVHMIEQY 303 >gi|145635050|ref|ZP_01790756.1| N5-glutamine methyltransferase [Haemophilus influenzae PittAA] gi|145267658|gb|EDK07656.1| N5-glutamine methyltransferase [Haemophilus influenzae PittAA] Length = 314 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 42/130 (32%), Positives = 71/130 (54%), Gaps = 2/130 (1%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ILDL TG+G + +A P + VD+S AL +A+ N N + R +QS+ F Sbjct: 144 HILDLCTGSGCIAIACAYAFPNAEVDAVDLSVDALNVAEINISRNQLEHRVFPIQSNLFE 203 Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 ++ G +D+IV+NPPY++ + + E F+P ++L G DGL+ + I +L Sbjct: 204 NILGQKYDLIVTNPPYVDEEDLADMPEEFH-FEPELALGSGSDGLNITKQILKQAPDYLT 262 Query: 219 KDGLCSVEIG 228 ++G+ E+G Sbjct: 263 ENGVLVCEVG 272 >gi|269837928|ref|YP_003320156.1| modification methylase, HemK family [Sphaerobacter thermophilus DSM 20745] gi|269787191|gb|ACZ39334.1| modification methylase, HemK family [Sphaerobacter thermophilus DSM 20745] Length = 284 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 64/226 (28%), Positives = 99/226 (43%), Gaps = 15/226 (6%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101 I R E + I G R+F + + PRPETE LV+ ALA+ R R VV Sbjct: 66 IARRAAGEPVAYITGHREFMGLDFLVDRRVLIPRPETEYLVEWALAWLRERGGDRLVV-- 123 Query: 102 LDLGTGTGAVCLALLKES--PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 D+GTG+GA+ ++L + P + VG D S AL +A N R + D S Sbjct: 124 -DVGTGSGAIAVSLAAHADDPALRVVGSDRSLDALRVAAINR-DRLAPGRVALVAGDLLS 181 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 D++++N PY+ G+ ++P ++L G G Y + V++ L Sbjct: 182 WCRPGIDLVLANLPYLRPDQAHA-GIA---WEPAVALYAGETGFGLYEQLLPQVAQRLRP 237 Query: 220 DGLCSVEIGYNQKVDVVRIFESRKLFL---VNAFKDYGGNDRVLLF 262 G EI +Q+ + + +R F + D G DR L+ Sbjct: 238 RGAVGCEIDPSQR--AIALATARSHFPTARITVRPDLAGLDRYLII 281 >gi|309782153|ref|ZP_07676883.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Ralstonia sp. 5_7_47FAA] gi|308919219|gb|EFP64886.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Ralstonia sp. 5_7_47FAA] Length = 300 Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 53/177 (29%), Positives = 83/177 (46%), Gaps = 8/177 (4%) Query: 91 PRIEKRD-VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 P I++ D +L+L TG+G + + + P VD+S AL +A N + +R Sbjct: 126 PWIDQEDGPTDVLELCTGSGCLSILAALQWPNSTIDAVDLSPDALVVANRNVDEYHLQDR 185 Query: 150 FDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207 + D ++ + +DVI++NPPY+ + L E R +P ++L GG DG+ R Sbjct: 186 IRLHEGDLYAPLPPGVHYDVILTNPPYVNEASMQALPPEYR-AEPHMALAGGNDGMDIVR 244 Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 I RHL G+ VEIG N++ +V F L G D+V L R Sbjct: 245 RILADAPRHLKPHGVLVVEIG-NERENVEAAFPDLDLVW---LPTSAGEDQVFLVTR 297 >gi|254228465|ref|ZP_04921891.1| methyltransferase, HemK family [Vibrio sp. Ex25] gi|269965657|ref|ZP_06179770.1| conserved hypothetical protein [Vibrio alginolyticus 40B] gi|151939053|gb|EDN57885.1| methyltransferase, HemK family [Vibrio sp. Ex25] gi|269829725|gb|EEZ83961.1| conserved hypothetical protein [Vibrio alginolyticus 40B] Length = 292 Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 41/134 (30%), Positives = 72/134 (53%), Gaps = 2/134 (1%) Query: 96 RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155 + RI+DL TG+G + +A P + +DIS AL++A+ N +G+ ++ ++S Sbjct: 113 EEPTRIMDLCTGSGCIAIACAHAFPEAEVDAIDISTDALQVAEQNVQDHGMEQQVFPIRS 172 Query: 156 DWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214 D F + + +++IVSNPPY++ ++ L E +P + L G DGL R I Sbjct: 173 DLFRDLPKEKYNLIVSNPPYVDEEDMNSLPDEFT-HEPELGLAAGTDGLKLVRRILANAP 231 Query: 215 RHLNKDGLCSVEIG 228 +L +G+ E+G Sbjct: 232 DYLTDNGILICEVG 245 >gi|296119522|ref|ZP_06838080.1| protein-(glutamine-N5) methyltransferase [Corynebacterium ammoniagenes DSM 20306] gi|295967405|gb|EFG80672.1| protein-(glutamine-N5) methyltransferase [Corynebacterium ammoniagenes DSM 20306] Length = 290 Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 64/227 (28%), Positives = 99/227 (43%), Gaps = 11/227 (4%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAF---SLPRIEKRDV 98 I R ++ E + I+G F + L + F PRPETE L D A+ + + PR ++ Sbjct: 61 ISRRVEREPLQHIMGTAAFGPLDLEVGPGVFIPRPETESLADWAVNYLQKNHPRHQETPP 120 Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS--- 155 V ++DL TG+GA+ + P + + V++S +L N V + S Sbjct: 121 V-VVDLCTGSGALAAYISYYRPDARIIAVELSDASLTFTHRNLAGTSVEIVQADVTSPEL 179 Query: 156 -DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214 D S+V G D++V+NPPY+ L EV FDP ++ G DG+ + + Sbjct: 180 LDKLSAVVGQVDLVVTNPPYVPE--EPNLAPEVY-FDPHDAVFSGDDGMDVIHAMMPNIV 236 Query: 215 RHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 L +E V V L V+ KD GG R +L Sbjct: 237 ALLRPGARVGIEHDDTTSVAVQETARDAGLVNVSPLKDLGGTARFVL 283 >gi|300786119|ref|YP_003766410.1| HemK protein [Amycolatopsis mediterranei U32] gi|299795633|gb|ADJ46008.1| HemK protein [Amycolatopsis mediterranei U32] Length = 254 Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 59/196 (30%), Positives = 93/196 (47%), Gaps = 12/196 (6%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110 + +LGW +F+ +R+T+ F PR T LVD A++ + P D V +LDL G+GA Sbjct: 48 LEHLLGWAEFHGLRVTVRPGVFVPRHRTGFLVDVAVSLAPP-----DPV-VLDLCCGSGA 101 Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV--SERFDTLQSDWFSSVEGLFDVI 168 + A P + D+ A+E A+ N + + +D L S S+ G D++ Sbjct: 102 LGAAFAAARPPRELHAADVETAAVECARLNLPDAHIYQGDLYDALPS----SLRGGVDIL 157 Query: 169 VSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228 ++N PY+ S V + E R +P ++LDGG DGL R +A L G +E Sbjct: 158 LANVPYVPSDAVSTMPPEARLHEPLVALDGGADGLDLARRVAADAPGWLAPGGTLLIESS 217 Query: 229 YNQKVDVVRIFESRKL 244 Q + I + L Sbjct: 218 ERQAPVLAEILAAAGL 233 >gi|261252337|ref|ZP_05944910.1| hypothetical adenine-specific methylase yfcB [Vibrio orientalis CIP 102891] gi|260935728|gb|EEX91717.1| hypothetical adenine-specific methylase yfcB [Vibrio orientalis CIP 102891] Length = 310 Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 41/134 (30%), Positives = 71/134 (52%), Gaps = 2/134 (1%) Query: 96 RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155 + RI+DL TG+G + +A P + +DIS AL++A+ N +G+ ++ ++S Sbjct: 131 EEPTRIMDLCTGSGCIAIACAHAFPDAEVDAIDISTDALQVAEQNVQDHGMEQQVFPIRS 190 Query: 156 DWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214 D F + + +++IVSNPPY++ ++ L E +P + L G DGL R I Sbjct: 191 DLFRDLPKEKYNIIVSNPPYVDQEDMNSLPDEFT-HEPELGLAAGTDGLKLVRRILANAP 249 Query: 215 RHLNKDGLCSVEIG 228 +L G+ E+G Sbjct: 250 DYLTDSGILICEVG 263 >gi|225013053|ref|ZP_03703468.1| methyltransferase small [Flavobacteria bacterium MS024-2A] gi|225002781|gb|EEG40762.1| methyltransferase small [Flavobacteria bacterium MS024-2A] Length = 220 Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 52/163 (31%), Positives = 82/163 (50%), Gaps = 5/163 (3%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD--WF 158 ++D GTG+G + +AL KE P F+ +D L +AK NA+ N S F LQ D Sbjct: 55 LIDFGTGSGCIAIALAKEQPSFEVTAIDFYSSVLNLAKQNAIKNKTSVSF--LQHDILQL 112 Query: 159 SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL-DGGIDGLSHYRTIADGVSRHL 217 ++++ D+IVSNPPYI + V +++P ++L D L Y +I + +L Sbjct: 113 NTLKLNVDIIVSNPPYIPPSEQREMKPNVLNYEPHLALFVPENDPLIFYCSILEYGLLYL 172 Query: 218 NKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 DGL EI ++ + S K++ + KD G R+L Sbjct: 173 VSDGLIYFEINPRFLSEMKSLILSFKVYSILERKDIFGKLRML 215 >gi|94310361|ref|YP_583571.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Cupriavidus metallidurans CH34] gi|93354213|gb|ABF08302.1| N5-glutamine methyltransferase [Cupriavidus metallidurans CH34] Length = 297 Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 50/163 (30%), Positives = 80/163 (49%), Gaps = 7/163 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +L+L TG+G + + P + VDIS AL +A+ N + R + D ++ Sbjct: 132 VLELCTGSGCLPIIAAHVWPHARIDAVDISSDALAVARRNVADYKMENRITLYEGDLYAP 191 Query: 161 VE--GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 + +DVI++NPPY+ + L E +PRI+L GG DG+ R I G + LN Sbjct: 192 LPSTATYDVILTNPPYVNEQSMRDLPPEYM-AEPRIALAGGDDGMDVVRRIIAGAKKRLN 250 Query: 219 KDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 G VEIG N++ +V F + ++ G+D+V L Sbjct: 251 PGGALVVEIG-NERENVEAAFPDLDIVWLSV---SAGDDQVFL 289 >gi|152979006|ref|YP_001344635.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Actinobacillus succinogenes 130Z] gi|150840729|gb|ABR74700.1| modification methylase, HemK family [Actinobacillus succinogenes 130Z] Length = 314 Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 50/156 (32%), Positives = 79/156 (50%), Gaps = 6/156 (3%) Query: 74 PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133 PR L+ S L KR ILDL TG+G + +A P + VD+S A Sbjct: 121 PRSPISALIQSNFNGLLSHTPKR----ILDLCTGSGCIAIACAHVFPQAEVDAVDLSFDA 176 Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDP 192 L +A+ N + + R LQSD F ++ + +D+IV+NPPY++ + + E R +P Sbjct: 177 LNVAEINIERHNMLHRVFPLQSDLFENLPQDQYDLIVTNPPYVDLEDLSDMPQEFR-HEP 235 Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228 ++L G DGL + I + +L+ DG+ E+G Sbjct: 236 ELALGSGADGLDITKRILAQAADYLSDDGILVCEVG 271 >gi|219870756|ref|YP_002475131.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Haemophilus parasuis SH0165] gi|219690960|gb|ACL32183.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Haemophilus parasuis SH0165] Length = 314 Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 48/156 (30%), Positives = 82/156 (52%), Gaps = 4/156 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 RILD+ TG+G + +A + P + VD+S AL +A+ N + ++ R QSD F Sbjct: 143 RILDMCTGSGCIAIACADKFPNAEIDAVDLSVDALNVAEINIERHNMAHRVFPFQSDLFD 202 Query: 160 SV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 + + +D+IV+NPPY++ +D + E +P ++L G DGL + I + L+ Sbjct: 203 DLPQDRYDLIVTNPPYVDQEDLDDMPEEFH-HEPEMALGSGADGLDITKRILAQAADFLS 261 Query: 219 KDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYG 254 +G+ E+G N V ++ F S + FK+ G Sbjct: 262 DNGVLVCEVG-NSMVHLIEQFPSVPFHWLE-FKNGG 295 >gi|309802546|ref|ZP_07696650.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bifidobacterium dentium JCVIHMP022] gi|308220610|gb|EFO76918.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bifidobacterium dentium JCVIHMP022] Length = 298 Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 65/234 (27%), Positives = 101/234 (43%), Gaps = 20/234 (8%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV--V 99 I R + E + I G F + L + F PRPETEL+V + + I + Sbjct: 67 IDRRARREPLQHITGHAPFRYLDLKVGPGVFIPRPETELIVQEGIDW----ITRNGGYHA 122 Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN----------AVTNGVSER 149 R++DL G+GA+ LA++ E P + V+ S + E + N + N E Sbjct: 123 RVVDLCAGSGAIGLAVVTEVPGSEVWAVEKSERTAEWTRRNLNETARAHPSIIGNYHLEI 182 Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPYIE-SVIVDCLGLEVRDFDPRISLDGG-IDGLSHYR 207 D Q ++G D++++NPPY+ S I + EVRD+DP ++L GG DG Sbjct: 183 GDATQMPTLHQLDGTIDIVLTNPPYVPLSEIPEQ--PEVRDYDPDMALYGGSADGTLIPE 240 Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 I + L GL +E +Q + + DY G R L+ Sbjct: 241 RIILRAGKLLRPGGLLVMEHDISQGERLAAYANAHGFANTRVRNDYTGRPRYLI 294 >gi|306823421|ref|ZP_07456796.1| protein-(glutamine-N5) methyltransferase [Bifidobacterium dentium ATCC 27679] gi|304553128|gb|EFM41040.1| protein-(glutamine-N5) methyltransferase [Bifidobacterium dentium ATCC 27679] Length = 317 Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 65/234 (27%), Positives = 101/234 (43%), Gaps = 20/234 (8%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV--V 99 I R + E + I G F + L + F PRPETEL+V + + I + Sbjct: 86 IDRRARREPLQHITGHAPFRYLDLKVGPGVFIPRPETELIVQEGIDW----ITRNGGYHA 141 Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN----------AVTNGVSER 149 R++DL G+GA+ LA++ E P + V+ S + E + N + N E Sbjct: 142 RVVDLCAGSGAIGLAVVTEVPGSEVWAVEKSERTAEWTRRNLNETARAHPSIIGNYHLEI 201 Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPYIE-SVIVDCLGLEVRDFDPRISLDGG-IDGLSHYR 207 D Q ++G D++++NPPY+ S I + EVRD+DP ++L GG DG Sbjct: 202 GDATQMPTLHQLDGTIDIVLTNPPYVPLSEIPEQ--PEVRDYDPDMALYGGSADGTLIPE 259 Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 I + L GL +E +Q + + DY G R L+ Sbjct: 260 RIILRAGKLLRPGGLLVMEHDISQGERLAAYANAHGFANTRVRNDYTGRPRYLI 313 >gi|317048991|ref|YP_004116639.1| ribosomal protein L3-specific protein-(glutamine-N5) methyltransferase [Pantoea sp. At-9b] gi|316950608|gb|ADU70083.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Pantoea sp. At-9b] Length = 310 Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 45/141 (31%), Positives = 76/141 (53%), Gaps = 3/141 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ILD+ TG+G + +A P + VDIS AL +A+ N +G+ +++D F Sbjct: 135 HILDMCTGSGCIAIACAYAFPEAEVDAVDISTDALAVAEQNIEEHGLLNHVTPIRADLFR 194 Query: 160 SV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 + E +D+IV+NPPY+++ +D L E R +P + L G DGL R I ++L+ Sbjct: 195 GLPEVKYDLIVTNPPYVDAEDMDDLPGEYR-HEPELGLAAGSDGLKLVRRILACAPKYLS 253 Query: 219 KDGLCSVEIGYNQKVDVVRIF 239 + G+ E+G N V ++ + Sbjct: 254 EQGVLICEVG-NSMVHMIEQY 273 >gi|209695606|ref|YP_002263535.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Aliivibrio salmonicida LFI1238] gi|208009558|emb|CAQ79852.1| putative methyltransferase [Aliivibrio salmonicida LFI1238] Length = 314 Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 41/131 (31%), Positives = 69/131 (52%), Gaps = 2/131 (1%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 RI+DL TG+G + +A P + +DIS AL +A+ N +G+ ++ ++SD F Sbjct: 138 TRIMDLCTGSGCIAIACAHAFPEAEVDAIDISTDALMVAEQNIQDHGMEQQVFPMRSDLF 197 Query: 159 SSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217 + + ++ IVSNPPY++ ++ L E + +P + L G DGL R I +L Sbjct: 198 RDIPKDQYNFIVSNPPYVDEEDMNSLPEEF-EHEPELGLAAGTDGLKLVRRILANAPDYL 256 Query: 218 NKDGLCSVEIG 228 +G E+G Sbjct: 257 TDEGFLICEVG 267 >gi|145627817|ref|ZP_01783618.1| N5-glutamine methyltransferase [Haemophilus influenzae 22.1-21] gi|144979592|gb|EDJ89251.1| N5-glutamine methyltransferase [Haemophilus influenzae 22.1-21] Length = 314 Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 43/145 (29%), Positives = 79/145 (54%), Gaps = 3/145 (2%) Query: 96 RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155 ++ ILDL TG+G + +A P + VD+S AL +A+ N + + R +QS Sbjct: 140 QEPYHILDLCTGSGCIAIACAYAFPNAEVDAVDLSVDALNVAEINISRHQLEHRVFPIQS 199 Query: 156 DWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214 + F+++ G +D+IV+NPPY++ + + E F+P ++L G DGL+ + I Sbjct: 200 NLFTNILGQKYDLIVTNPPYVDEEDLADMPEEFH-FEPELALGSGSDGLNITKQILKQAP 258 Query: 215 RHLNKDGLCSVEIGYNQKVDVVRIF 239 +L ++G+ E+G N V ++ + Sbjct: 259 NYLTENGVLVCEVG-NSMVSLIEQY 282 >gi|262201324|ref|YP_003272532.1| modification methylase, HemK family [Gordonia bronchialis DSM 43247] gi|262084671|gb|ACY20639.1| modification methylase, HemK family [Gordonia bronchialis DSM 43247] Length = 264 Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 53/193 (27%), Positives = 81/193 (41%), Gaps = 12/193 (6%) Query: 43 VRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRIL 102 R + E + ILGW F +RL + F PR + L+ D+A+A L +L Sbjct: 48 ARRVAGEPLEHILGWVGFAGLRLAVGPGVFVPRQRSVLVADAAVAHILTSGANPT---LL 104 Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162 + G + + P D AL A+ N V + FS V Sbjct: 105 EAFCGVAPIATVVHHRVPGASIHLTDADPVALRYARRN-----VGDDAGVYVGPGFSGVP 159 Query: 163 ----GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 G DV+ + PPY+ + L E R+++PR +L G DGL H R + D + L+ Sbjct: 160 AHLRGYIDVVAAVPPYVPERDFEQLPHEAREYEPRAALIAGPDGLDHVRELIDDAAEWLS 219 Query: 219 KDGLCSVEIGYNQ 231 G+ VE+ + Q Sbjct: 220 PHGVLVVEMNHAQ 232 >gi|298346213|ref|YP_003718900.1| HemK family modification methylase [Mobiluncus curtisii ATCC 43063] gi|298236274|gb|ADI67406.1| HemK family modification methylase [Mobiluncus curtisii ATCC 43063] Length = 290 Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 64/237 (27%), Positives = 101/237 (42%), Gaps = 16/237 (6%) Query: 34 QRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRI 93 QRFF + + + ++G F ++ L F RPETE + A+ + + Sbjct: 56 QRFF--ELVGQRATRVPLQHVMGVMYFRHLTLHARPGVFVVRPETEWVAQGAIDAAADWV 113 Query: 94 EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF--- 150 + R+LDLG G+GA+ L++ E P VD+S A+E+ NA GV+ R Sbjct: 114 RQGVAPRVLDLGCGSGALGLSIASEVPQSVLTCVDVSEAAVELTAENARFTGVAARVLLA 173 Query: 151 -----DTLQSDWF-SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL-DGGIDGL 203 TL++ + + F VI +NPPY +VD + DP+++L GG DGL Sbjct: 174 DATDPQTLRNALVRAEIPPQFHVIATNPPY----VVDPVTQPEAAQDPQLALYGGGTDGL 229 Query: 204 SHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 R + +E +Q +V+ E+ L D G R L Sbjct: 230 ERPRAFLAAAAAVALPGATIVMEHAESQGEALVKAAEALGLRGAQTRCDLAGRPRFL 286 >gi|317492688|ref|ZP_07951115.1| methyltransferase [Enterobacteriaceae bacterium 9_2_54FAA] gi|316919438|gb|EFV40770.1| methyltransferase [Enterobacteriaceae bacterium 9_2_54FAA] Length = 310 Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 43/130 (33%), Positives = 67/130 (51%), Gaps = 2/130 (1%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ILD+ TG+G + +A P + VDIS L + + N +G+ + ++SD F Sbjct: 135 HILDMCTGSGCIAIACAYAFPDAEVDAVDISTDVLSVTEQNIQEHGLDQSVTPIRSDLFR 194 Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 + L +D+IV+NPPY++ + L E R F+P + L G DGL R I +L Sbjct: 195 ELPPLQYDLIVTNPPYVDEEDMSDLPEEFR-FEPELGLAAGSDGLKLTRRILACAPDYLT 253 Query: 219 KDGLCSVEIG 228 DG+ E+G Sbjct: 254 DDGVLICEVG 263 >gi|283455531|ref|YP_003360095.1| hemK Peptide release factor-glutamine N5-methyltransferase [Bifidobacterium dentium Bd1] gi|283102165|gb|ADB09271.1| hemK Peptide release factor-glutamine N5-methyltransferase [Bifidobacterium dentium Bd1] Length = 298 Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 65/234 (27%), Positives = 101/234 (43%), Gaps = 20/234 (8%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV--V 99 I R + E + I G F + L + F PRPETEL+V + + I + Sbjct: 67 IDRRARREPLQHITGHAPFRYLDLKVGPGVFIPRPETELIVQEGIDW----ITRNGGYHA 122 Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN----------AVTNGVSER 149 R++DL G+GA+ LA++ E P + V+ S + E + N + N E Sbjct: 123 RVVDLCAGSGAIGLAVVTEVPGSEVWAVEKSERTAEWTRRNLNETAQAHPSIIGNYHLEI 182 Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPYIE-SVIVDCLGLEVRDFDPRISLDGG-IDGLSHYR 207 D Q ++G D++++NPPY+ S I + EVRD+DP ++L GG DG Sbjct: 183 GDATQMPTLHQLDGTIDIVLTNPPYVPLSEIPEQ--PEVRDYDPDMALYGGSADGTLIPE 240 Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 I + L GL +E +Q + + DY G R L+ Sbjct: 241 RIILRAGKLLRPGGLLVMEHDISQGERLAAYANAHGFANTRVRNDYTGRPRYLI 294 >gi|328767396|gb|EGF77446.1| hypothetical protein BATDEDRAFT_91674 [Batrachochytrium dendrobatidis JAM81] Length = 425 Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 73/256 (28%), Positives = 112/256 (43%), Gaps = 38/256 (14%) Query: 44 RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETE---LLVDSALAFSLPRIEKRDVVR 100 R + H+ + ILG + F + +++ T PR ETE L + + + +R Sbjct: 168 RCIAHKPLQYILGTQPFCGLDISVRRPTLIPRWETEEWTLSLADRIHAKTANQQLPKPLR 227 Query: 101 ILDLGTGTGAVCLALLKESPFFKG-VGVDISCKALEIAKSN-------AVTNGVSERFDT 152 IL+L +G+G + LAL K+ VGVDIS A+ +A+ N V NG S++ Sbjct: 228 ILELCSGSGCISLALSKKLGIHAHIVGVDISLSAILLARFNQRKLMIGCVGNGSSQQLFF 287 Query: 153 LQSDWFSS-----------------VEGLFDVIVSNPPYIESVIVDCLGLEVRDF-DPRI 194 Q D F + V+ FD+I+SNPPYI D L V+ + D R Sbjct: 288 DQGDLFDNEFVGRLLSQMSSRLPNLVDPRFDMIISNPPYISPTEYDSLDSSVKMWEDQRA 347 Query: 195 SLDGGIDGLSHYRTIAD-------GVSRHLNKDGLCSV--EIGYNQKVDVVRIFESRKLF 245 L G+ YR I + +S + L + EIG Q V +R+ Sbjct: 348 LLASDEHGIRFYRRIEELADDLLLPLSHACQQYDLPRIVFEIGNTQGSAVKSQLGNRQWR 407 Query: 246 LVNAFKDYGGNDRVLL 261 + +D G+DRV+L Sbjct: 408 RTDLVQDMAGHDRVIL 423 >gi|301169942|emb|CBW29546.1| N5-glutamine methyltransferase [Haemophilus influenzae 10810] Length = 314 Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 42/130 (32%), Positives = 72/130 (55%), Gaps = 2/130 (1%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ILDL TG+G + +A P + VD+S AL +A+ N + + R +QS+ F Sbjct: 144 HILDLCTGSGCIAIACAYTFPNAEVDAVDLSVDALNVAEINISRHKLEHRVFPIQSNLFE 203 Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 ++ G +D+IV+NPPY++ + + E F+P ++L G DGL+ + I S +L Sbjct: 204 NILGQKYDLIVTNPPYVDEEDLADMPEEFH-FEPELALGSGSDGLNITKQILKQASDYLT 262 Query: 219 KDGLCSVEIG 228 ++G+ E+G Sbjct: 263 ENGVLVCEVG 272 >gi|270284379|ref|ZP_05966016.2| protein-(glutamine-N5) methyltransferase [Bifidobacterium gallicum DSM 20093] gi|270276760|gb|EFA22614.1| protein-(glutamine-N5) methyltransferase [Bifidobacterium gallicum DSM 20093] Length = 365 Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 68/234 (29%), Positives = 104/234 (44%), Gaps = 16/234 (6%) Query: 39 TNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV 98 T + R E + I G F + L + F PRPETE +V +AL + K Sbjct: 130 TAMLARREAREPLQHITGHAPFRYLDLLVGPGVFVPRPETESVVQAALDWMDQHGMKSP- 188 Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN-----AVTNGVSERFDTL 153 R++DL G+GA+ L++ E P V++ A + N A ++ R+ + Sbjct: 189 -RVVDLCAGSGAIGLSVATEVPDSCVWAVEMDATAASWTRRNLDRVGATMPDLASRYRLM 247 Query: 154 QSDW-----FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG-IDGLSHYR 207 ++D + ++G DV++SNPPYI V EVR++DP ++L GG DG+ Sbjct: 248 RADATCELTLADLDGTVDVVISNPPYIPEHDVP-EQTEVREYDPDMALYGGSADGMMIPE 306 Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA-FKDYGGNDRVL 260 I L GL +E +Q V R F + F A +D G R L Sbjct: 307 RIISRAWALLKPGGLLVMEHDISQPVR-TRAFATAIGFSQAATHEDLTGRPRFL 359 >gi|171741091|ref|ZP_02916898.1| hypothetical protein BIFDEN_00157 [Bifidobacterium dentium ATCC 27678] gi|171276705|gb|EDT44366.1| hypothetical protein BIFDEN_00157 [Bifidobacterium dentium ATCC 27678] Length = 317 Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 65/234 (27%), Positives = 101/234 (43%), Gaps = 20/234 (8%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV--V 99 I R + E + I G F + L + F PRPETEL+V + + I + Sbjct: 86 IDRRARREPLQHITGHAPFRYLDLKVGPGVFIPRPETELIVQEGIDW----ITRNGGYHA 141 Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN----------AVTNGVSER 149 R++DL G+GA+ LA++ E P + V+ S + E + N + N E Sbjct: 142 RVVDLCAGSGAIGLAVVTEVPGSEVWAVEKSERTAEWTRRNLNETAQAHPSIIGNYHLEI 201 Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPYIE-SVIVDCLGLEVRDFDPRISLDGG-IDGLSHYR 207 D Q ++G D++++NPPY+ S I + EVRD+DP ++L GG DG Sbjct: 202 GDATQMPTLHQLDGTIDIVLTNPPYVPLSEIPEQ--PEVRDYDPDMALYGGSADGTLIPE 259 Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 I + L GL +E +Q + + DY G R L+ Sbjct: 260 RIILRAGKLLRPGGLLVMEHDISQGERLAAYANAHGFANTRVRNDYTGRPRYLI 313 >gi|300724039|ref|YP_003713354.1| N5-glutamine methyltransferase [Xenorhabdus nematophila ATCC 19061] gi|297630571|emb|CBJ91236.1| N5-glutamine methyltransferase, modifies ribosomal protein L3 [Xenorhabdus nematophila ATCC 19061] Length = 311 Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 46/155 (29%), Positives = 76/155 (49%), Gaps = 3/155 (1%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 ILDL TG+G + +A + VDIS AL +A+ N + +S R ++SD F Sbjct: 136 ILDLCTGSGCIAIACAHAFSEAEVDAVDISPDALAVAEINIENHKLSHRVIPIRSDLFHD 195 Query: 161 VEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 + + +D+I +NPPY++ + E D +P +++ G+DGL R I L + Sbjct: 196 IPSVKYDIIATNPPYVDEEDMSDFPQEY-DHEPELAMAAGVDGLDLVRRILATAPDFLAE 254 Query: 220 DGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYG 254 DG+ E+G N V ++ + + DYG Sbjct: 255 DGILVCEVG-NSMVHLIEQYPDVPFKWLTFEHDYG 288 >gi|255513476|gb|EET89742.1| methylase [Candidatus Micrarchaeum acidiphilum ARMAN-2] Length = 196 Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 56/163 (34%), Positives = 80/163 (49%), Gaps = 26/163 (15%) Query: 60 FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119 + +V++T + P ++ +L +E++ ++LDLGTGTG + K Sbjct: 16 YESVKITGCRGVYYPAEDSYMLAKI--------VERKAFGKVLDLGTGTGIQGIVAAKAG 67 Query: 120 --PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIES 177 +F DIS AL+ A+ NA NGV RF L+SD FS V+G F+ I+ NPPY+ES Sbjct: 68 CEVYFS----DISENALQCAEKNAELNGVHGRF--LRSDLFSKVKGRFNTIIFNPPYLES 121 Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220 G E+R D LDGG+ G GV L D Sbjct: 122 ------GKEIRYAD----LDGGVLGRELIDRFLSGVKEFLLPD 154 >gi|270339624|ref|ZP_06005478.2| protein-(glutamine-N5) methyltransferase [Prevotella bergensis DSM 17361] gi|270334333|gb|EFA45119.1| protein-(glutamine-N5) methyltransferase [Prevotella bergensis DSM 17361] Length = 301 Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 61/222 (27%), Positives = 95/222 (42%), Gaps = 4/222 (1%) Query: 44 RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALA-FSLPRIEKRDVV--R 100 R K E + +LG DF + PRPETE L ++ ++ P + V + Sbjct: 77 RLQKGEPVQYVLGRSDFCGRTFHVEPGVLIPRPETEELCQMIVSEYTKPYCALQPPVPLQ 136 Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LD+GTG+G + + L + D+S +AL IA+ NA G + Sbjct: 137 VLDVGTGSGCIAVTLALGLHNAEITAWDVSSEALIIARDNAHRLGAKVNLEWQDMLCPPE 196 Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL-DGGIDGLSHYRTIADGVSRHLNK 219 + +D++VSNPPYI + + V D++P +L D L YR IA R L K Sbjct: 197 DDRQWDIMVSNPPYIANHERKAMSRNVLDYEPEQALFVPDDDPLRFYRAIATYARRTLKK 256 Query: 220 DGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 G EI ++ +F + KD G R+ + Sbjct: 257 GGKVFFEINPLYAEELQEMFHRQGFESTKLIKDSFGKQRIAI 298 >gi|313812712|gb|EFS50426.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes HL025PA1] Length = 291 Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 67/256 (26%), Positives = 109/256 (42%), Gaps = 9/256 (3%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ LC + Q+I DD RF + R E I+G F +RL Sbjct: 28 DARMLLCEALRIQPSQLIRVASVNADDEDRF--NQMVDRRRSGEPAQYIIGHAWFRGLRL 85 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 + F PR ETEL+ + ++ + + ++DL TGTGA+ LA+ E P + Sbjct: 86 EVGPGVFIPRLETELVAEQSIQEARRLVMSGACPSVIDLCTGTGAIALAVASEVPGSRVS 145 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCL 183 V++ AL + N +GV + L D + FDV+V+NPPY+ + Sbjct: 146 AVEVDDAALTWTRRNLCDSGV----EVLAGDALRVPDDSRRFDVVVTNPPYLRRSDASSI 201 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 EV + +P ++L G DGL + + L GL +E Q+ ++V + Sbjct: 202 PGEVTEHEPDLALFSGDDGLDLPLLLIGRAAELLTPSGLFVMEHDETQREELVAAMATSD 261 Query: 244 LF-LVNAFKDYGGNDR 258 ++ + D G R Sbjct: 262 MWEQIEDHDDLAGRPR 277 >gi|315502385|ref|YP_004081272.1| modification methylase, hemk family [Micromonospora sp. L5] gi|315409004|gb|ADU07121.1| modification methylase, HemK family [Micromonospora sp. L5] Length = 263 Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 63/212 (29%), Positives = 97/212 (45%), Gaps = 16/212 (7%) Query: 38 LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97 LT + R + + +LGW +F R+ + F PR T LLVD+A A + Sbjct: 42 LTRLVDRRVAGLPLEHLLGWAEFCGRRIAVHPGVFVPRGRTALLVDAAAALAG------P 95 Query: 98 VVRILDLGTGTGAVCLALL-KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 +LDL G+GA + L + +P + DI A+ A+ N GV Q D Sbjct: 96 APVVLDLCCGSGAAAVVLHDRLTPGWLAAA-DIDPVAVACARRNLEPLGVP----VYQGD 150 Query: 157 WFSSVE----GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212 F ++ G D++V+N PY+ + V L E R ++ ++LDGG DGL+ R +A G Sbjct: 151 LFDALPAGRRGTLDLVVANAPYVPTAAVASLPAEARLYEAPVALDGGTDGLAVLRRVASG 210 Query: 213 VSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 + L G VE Q ++ F + L Sbjct: 211 AAEWLAPGGHVVVESSVAQAPELCAAFTAVGL 242 >gi|283953911|ref|ZP_06371440.1| putative DNA methylase [Campylobacter jejuni subsp. jejuni 414] gi|283794516|gb|EFC33256.1| putative DNA methylase [Campylobacter jejuni subsp. jejuni 414] Length = 269 Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 66/252 (26%), Positives = 112/252 (44%), Gaps = 17/252 (6%) Query: 11 LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70 LC + ++ D +D F L I R E I DF+ ++ + Sbjct: 25 LCEYLQKDKAWLFLNQDIKIDHESYFQL---IKRFKSGEPFEYIFEKVDFWGLKFKIKKG 81 Query: 71 TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130 PR ++E+L+ L +K +IL++G G+G + + L KE K DI+ Sbjct: 82 VLIPRYDSEILLFQILNLC----KKNTFNKILEIGFGSGILSIVLAKELGL-KITACDIN 136 Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDF 190 KALE+A NA + V + + F +E +D I SNPPYI++ + ++ Sbjct: 137 PKALELALENAKLHKVDHLINFKLCN-FKQIEENYDFIFSNPPYIKNSYPIDIWVQR--- 192 Query: 191 DPRISLDGGIDGLSHYRTIADGVSRHLNKD-GLCSVEIGYNQKVDVVRIFESRKLFLVNA 249 +P+ +L GG G Y + + + ++K + E GY+QK + +I F + Sbjct: 193 EPKEALFGGEKG---YEILEEIIHFSIDKKVKFLACEFGYDQKEVLEKILHQNN-FTADF 248 Query: 250 FKDYGGNDRVLL 261 FKD G +R + Sbjct: 249 FKDEQGYNRAFI 260 >gi|282877096|ref|ZP_06285938.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Prevotella buccalis ATCC 35310] gi|281300778|gb|EFA93105.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Prevotella buccalis ATCC 35310] Length = 287 Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 66/224 (29%), Positives = 96/224 (42%), Gaps = 5/224 (2%) Query: 38 LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97 L + R + E + +LG +F R + PRPETE L A S + + Sbjct: 55 LEKIMQRLRQAEPVQYVLGEAEFAGRRFKVVPGVLIPRPETEELC--AWIVSEQKPTDGN 112 Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 ILD+GTG+G + + L + P DIS AL IA NA V F LQ Sbjct: 113 PTTILDIGTGSGCLAVTLSLDIPGAAVSAWDISQDALLIANENAKAWKVPVSF-ALQDAL 171 Query: 158 FSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISL-DGGIDGLSHYRTIADGVSR 215 + + + +D+I SNPPYI + V F+P +L D L Y+ IA+ Sbjct: 172 AAPKDSMKWDIIASNPPYICPSEAAEMAQNVLKFEPSTALFVPQSDPLLFYKAIANYAIE 231 Query: 216 HLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRV 259 L DG VEI + + + ++ + KD G DR+ Sbjct: 232 ALIPDGKLYVEINPLYRNQLEEMLKNVGFIDIEIRKDAFGKDRM 275 >gi|157371612|ref|YP_001479601.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Serratia proteamaculans 568] gi|157323376|gb|ABV42473.1| modification methylase, HemK family [Serratia proteamaculans 568] Length = 324 Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 43/130 (33%), Positives = 69/130 (53%), Gaps = 2/130 (1%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ILD+ TG+G + +A P + VDIS L + + N GV ++ ++SD F Sbjct: 149 HILDMCTGSGCIAIACGYAFPDAEVDAVDISADVLAVTERNIQALGVEQQVTPIRSDLFR 208 Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 + + +D+IV+NPPY+++ + L E R F+P + L G DGL R I +L+ Sbjct: 209 DLPAIQYDLIVTNPPYVDAEDMSDLPEEFR-FEPELGLAAGSDGLKLVRRILACAPDYLS 267 Query: 219 KDGLCSVEIG 228 DG+ E+G Sbjct: 268 DDGVLICEVG 277 >gi|332993999|gb|AEF04054.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Alteromonas sp. SN2] Length = 311 Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 45/138 (32%), Positives = 73/138 (52%), Gaps = 2/138 (1%) Query: 95 KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154 K ILD+ TG G + +AL P + VDIS ALE+A N + +S R + Sbjct: 135 KEAPSHILDMCTGGGCIAIALAHAYPDSQVDAVDISEDALEVADINIQEHQLSHRVYPIH 194 Query: 155 SDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213 SD F+++ G +D+IVSNPPY+++ + L E +P ++L G DGL + Sbjct: 195 SDLFTNLTGQKYDLIVSNPPYVDAEDMADLPDEYH-HEPELALAAGDDGLELVDIMLREA 253 Query: 214 SRHLNKDGLCSVEIGYNQ 231 ++L +G +E+G ++ Sbjct: 254 PQYLTDNGWLFIEVGNSE 271 >gi|188533296|ref|YP_001907093.1| Probable adenine-specific methylase [Erwinia tasmaniensis Et1/99] gi|188028338|emb|CAO96199.1| Probable adenine-specific methylase [Erwinia tasmaniensis Et1/99] Length = 292 Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 42/130 (32%), Positives = 72/130 (55%), Gaps = 2/130 (1%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ILD+ TG+G + +A P + VDIS AL + + N +G+ + ++SD F Sbjct: 117 HILDMCTGSGCIAIACAWAFPQAEVDAVDISDDALAVTEQNISAHGLEQHVTPIRSDLFR 176 Query: 160 SV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 + + +D+IV+NPPY+++ +D L E R +P + L G DGL+ R I + +L+ Sbjct: 177 ELPKTQYDLIVTNPPYVDAEDMDDLPNEYR-HEPELGLAAGNDGLTLARRILGCAADYLS 235 Query: 219 KDGLCSVEIG 228 + G+ E+G Sbjct: 236 EQGVLVCEVG 245 >gi|322831933|ref|YP_004211960.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Rahnella sp. Y9602] gi|321167134|gb|ADW72833.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Rahnella sp. Y9602] Length = 310 Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 49/166 (29%), Positives = 79/166 (47%), Gaps = 6/166 (3%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ILD+ TG+G + +A P + VDIS AL +A+ N T+G+ ++SD F Sbjct: 135 HILDMCTGSGCIAIACAYAFPETEVDAVDISADALAVAERNIDTHGIENWVTPIRSDLFR 194 Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 + L +D+IV+NPPY++ + L E R +P + L G DGL R I +L Sbjct: 195 ELPPLQYDLIVTNPPYVDEEDMSDLPQEYR-HEPVLGLASGSDGLKLTRRILACAPDYLT 253 Query: 219 KDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 +G+ E+G + +V + E + G D V + + Sbjct: 254 DNGVLICEVGNS----MVHLMEQYPQIPFTWLEFENGGDGVFMLTK 295 >gi|83319283|ref|YP_424136.1| HemK family modification methylase [Mycoplasma capricolum subsp. capricolum ATCC 27343] gi|83283169|gb|ABC01101.1| modification methylase, HemK family [Mycoplasma capricolum subsp. capricolum ATCC 27343] Length = 270 Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 67/242 (27%), Positives = 114/242 (47%), Gaps = 31/242 (12%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D + L + + ++ + D VL +Q + L K + IL + FY+ Sbjct: 23 DVYHILEHILNKNYQWIVSNLDYVLTKKQLYKLEQISKLLEKKYPLAYILKNKYFYSNNF 82 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAV---CLALLKESPFF 122 ++ D PR E+EL++D F I+ + + I+DL TG+G + C L K++ Sbjct: 83 FINKDVLIPRNESELIIDYVSEF----IKNNNDLLIVDLCTGSGCLGISCALLNKQN--- 135 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFD-----TLQSDWFS-----SVEGLFDVIVSNP 172 K + DIS KAL++A N +RF+ L D+ S +++ +VI+SNP Sbjct: 136 KVILTDISYKALKVANKNI------KRFNLKNTACLSGDFISVLIKDNIKA--NVIISNP 187 Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR--HLNKDGLCSVEIGYN 230 PYI+ + L V +++P I+L GL Y + + + +NK L +E G+ Sbjct: 188 PYID-INDQNLDKNVIEYEPSIALFAPNKGLYFYEILIKNIDQIVDVNKKFLIVLEFGWL 246 Query: 231 QK 232 QK Sbjct: 247 QK 248 >gi|89900828|ref|YP_523299.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Rhodoferax ferrireducens T118] gi|89345565|gb|ABD69768.1| modification methylase, HemK family [Rhodoferax ferrireducens T118] Length = 310 Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 48/168 (28%), Positives = 82/168 (48%), Gaps = 9/168 (5%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LDL G G++ + P D+S +AL +A+ N +G+ R ++SD F+ Sbjct: 136 VLDLCCGNGSLAVLAAMAYPDVTVDASDLSKEALAVARINVDKHGLGGRITLIESDGFAR 195 Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD----GGIDGLSHYRTIADGVSRH 216 + G +D+I+ NPPY+ + L E +P ++LD GG DG+ R + +H Sbjct: 196 LPGRYDLILCNPPYVNLQSMAALPPEFH-AEPALALDGNRAGGQDGMDFIRRLLREAPQH 254 Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 +N+D + +EIG N++ F + + G D+VLL R Sbjct: 255 MNEDAVLVLEIG-NEREHFEAAFPRLEAIW---LETSAGEDQVLLLTR 298 >gi|307111109|gb|EFN59344.1| hypothetical protein CHLNCDRAFT_137784 [Chlorella variabilis] Length = 386 Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 58/185 (31%), Positives = 89/185 (48%), Gaps = 17/185 (9%) Query: 57 WRDFYNVRLTLSSDTFEPRPETELLVD---SALAFSLPRIEKRDVVRILDLGTGTGAVCL 113 WRD L++ PRPETEL++D A+A + P + + DLGTG+GA+ + Sbjct: 148 WRDIV---LSVGPGVLIPRPETELVIDFVQEAVAAA-PELARGAWA---DLGTGSGALAV 200 Query: 114 ALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNP 172 + + P + V VD+S L A NA G S F+ L++ + G +VSNP Sbjct: 201 GVARALPQAQQVYAVDLSPVPLSYAAFNARRLGGS-WFEPLEAAGMPQLAG----VVSNP 255 Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGID-GLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231 PYI S + L EV +P ++L GG G+ I G +R L G ++E + Sbjct: 256 PYIRSTDMPSLQAEVGRHEPHLALHGGEGLGIDCLLPICMGAARRLQPGGFLALETAGGE 315 Query: 232 KVDVV 236 + + Sbjct: 316 QAHYI 320 >gi|313764217|gb|EFS35581.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes HL013PA1] gi|313816310|gb|EFS54024.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes HL059PA1] gi|313827396|gb|EFS65110.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes HL063PA2] gi|314915695|gb|EFS79526.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes HL005PA4] gi|314917936|gb|EFS81767.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes HL050PA1] gi|314920319|gb|EFS84150.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes HL050PA3] gi|314931539|gb|EFS95370.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes HL067PA1] gi|314957924|gb|EFT02027.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes HL002PA1] gi|314967572|gb|EFT11671.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes HL037PA1] gi|315098770|gb|EFT70746.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes HL059PA2] gi|315101460|gb|EFT73436.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes HL046PA1] gi|315108752|gb|EFT80728.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes HL030PA2] gi|327329873|gb|EGE71627.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes HL097PA1] gi|327450546|gb|EGE97200.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes HL087PA3] gi|327454115|gb|EGF00770.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes HL083PA2] gi|328753198|gb|EGF66814.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes HL025PA2] gi|328753963|gb|EGF67579.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes HL087PA1] Length = 291 Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 67/256 (26%), Positives = 109/256 (42%), Gaps = 9/256 (3%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ LC + Q+I DD RF + R E I+G F +RL Sbjct: 28 DARMLLCEALRIQPSQLIRVASVNADDEDRF--NQMVDRRRSGEPAQYIIGHAWFRGLRL 85 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 + F PR ETEL+ + ++ + + ++DL TGTGA+ LA+ E P + Sbjct: 86 EVGPGVFIPRLETELVAEQSIQEARRLVMSGAFPSVIDLCTGTGAIALAVASEVPGSRVS 145 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCL 183 V++ AL + N +GV + L D + FDV+V+NPPY+ + Sbjct: 146 AVEVDDAALTWTRRNLCDSGV----EVLAGDALRVPDDSRRFDVVVTNPPYLRRSDASSI 201 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 EV + +P ++L G DGL + + L GL +E Q+ ++V + Sbjct: 202 PGEVTEHEPDLALFSGDDGLDLPLLLIGRAAELLTPSGLFVMEHDETQREELVAAMATSD 261 Query: 244 LF-LVNAFKDYGGNDR 258 ++ + D G R Sbjct: 262 MWEQIEDHDDLAGRPR 277 >gi|284925978|gb|ADC28330.1| HemK family modification methylase [Campylobacter jejuni subsp. jejuni IA3902] Length = 271 Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 69/255 (27%), Positives = 116/255 (45%), Gaps = 23/255 (9%) Query: 11 LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKH-ESIHRILGWRDFYNVRLTLSS 69 LC + ++ D +D F ++R K E I DF+ + + Sbjct: 25 LCEYLKKDKAWLFLNQDIQIDHEPYF----KLIRRFKSGEPFEYIFEKVDFWGLEFKIKK 80 Query: 70 DTFEPRPETELLVDSALAFSLPRIEKRDVVR-ILDLGTGTGAVCLALLKESPFFKGVGVD 128 PR ++E+L+ F + + K++ IL++G G+G + + L KE K D Sbjct: 81 GILIPRYDSEILL-----FQILNLCKKNTFNGILEIGFGSGILSIILAKELGL-KITACD 134 Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE-SVIVDCLGLEV 187 I+ KALE+A NA + V D + F ++ +D I SNPPYI+ S +D + Sbjct: 135 INPKALELALENAKLHKVDHLIDFKLCN-FKQIKENYDFIFSNPPYIKNSYPIDIWVQK- 192 Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD-GLCSVEIGYNQKVDVVRIFESRKLFL 246 +P+ +L GG G Y + + + L+K + E GY+QK + +I F+ Sbjct: 193 ---EPKEALFGGEKG---YEILEEIIHFSLDKKVKFLACEFGYDQKEILEKILYQNN-FI 245 Query: 247 VNAFKDYGGNDRVLL 261 V+ FKD G +R + Sbjct: 246 VDFFKDEQGYNRAFV 260 >gi|317014457|gb|ADU81893.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Helicobacter pylori Gambia94/24] Length = 276 Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 68/239 (28%), Positives = 104/239 (43%), Gaps = 35/239 (14%) Query: 31 DDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSL 90 ++ RFF + + L I +LG DFY ++ PRPETE+LV AL Sbjct: 51 EEEARFF--ELVGKRLNDCPIEYLLGSCDFYGRSFFVNEHVLIPRPETEILVQKALDI-- 106 Query: 91 PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150 I + + I ++G G+G V ++L E+P DIS ALE+A N + ER Sbjct: 107 --ISQYHLKEIGEIGIGSGCVSVSLALENPNLSIYASDISPNALEVALKNIERFNLKERV 164 Query: 151 DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDF--------DPRISLDGGIDG 202 Q+ + + + +++VSNPPYI RD+ +P +L GG+ G Sbjct: 165 FLKQTRLWDHMPTI-EMLVSNPPYI-----------ARDYPLEKSVLKEPHEALFGGVKG 212 Query: 203 ---LSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258 L +A G+ K E+GY+Q + E + +KD G DR Sbjct: 213 DEILKEIIFLAAGL-----KIPFLVCEMGYDQLKSLKECLEFCG-YDAEFYKDLSGFDR 265 >gi|145631251|ref|ZP_01787024.1| N5-glutamine methyltransferase [Haemophilus influenzae R3021] gi|144983178|gb|EDJ90673.1| N5-glutamine methyltransferase [Haemophilus influenzae R3021] Length = 314 Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 41/130 (31%), Positives = 72/130 (55%), Gaps = 2/130 (1%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ILDL TG+G + +A P + +D+S AL +A+ N + + R +QS+ F Sbjct: 144 HILDLCTGSGCIAIACAYAFPNAEVDAIDLSVDALNVAEINISRHQLEHRVFPIQSNLFE 203 Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 ++ G +D+IV+NPPY++ + + E F+P ++L G DGL+ + I S +L Sbjct: 204 NILGQKYDLIVTNPPYVDEEDLADMPEEFH-FEPELALGSGHDGLNITKQILKQASDYLT 262 Query: 219 KDGLCSVEIG 228 ++G+ E+G Sbjct: 263 ENGVLVCEVG 272 >gi|145589641|ref|YP_001156238.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145048047|gb|ABP34674.1| [LSU ribosomal protein L3P]-glutamine N5-methyltransferase [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 298 Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 63/242 (26%), Positives = 104/242 (42%), Gaps = 16/242 (6%) Query: 27 DSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPE-TELLVDSA 85 D + D+Q A R + + ILG V S + PR EL++D + Sbjct: 61 DQISADQQLKASAVADTRISTRKPLAYILGEAWLMGVPFFCSEQSIVPRSWIAELIIDGS 120 Query: 86 LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145 L LP LDL TG G++ + L P DIS AL +A N +G Sbjct: 121 LEPWLPADGNA-----LDLCTGNGSLAILLALSCPDIHVSACDISMPALSVAARNVDRHG 175 Query: 146 VSERFDTLQSDWFSSV-----EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200 + + + D + ++ + +FD+I+ NPPY+ + ++ L E +P ++L GG Sbjct: 176 LKSQIELFDGDLWDAIPEPNEDNVFDLIICNPPYVNATSMNALPAEYH-AEPALALAGGE 234 Query: 201 DGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 DG+ R I +L++ G +EIG N+ + + F + G ++VL Sbjct: 235 DGMDLIRRIITQAPDYLSERGAILIEIG-NEYENFKKAFPQIPAIWMEV---SAGEEQVL 290 Query: 261 LF 262 L Sbjct: 291 LI 292 >gi|260905207|ref|ZP_05913529.1| HemK family modification methylase [Brevibacterium linens BL2] Length = 267 Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 54/193 (27%), Positives = 82/193 (42%), Gaps = 10/193 (5%) Query: 43 VRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRIL 102 R + E + +I+GW DF R+ ++ F PR T LL ++ L + R L Sbjct: 49 ARRVAGEPLEQIVGWVDFAGQRIAVAPGVFVPRQRTTLLAQQSI---LAVQTAGESARFL 105 Query: 103 DLGTGTGAVCLALLKESPFFKGVGV---DISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 + G GAV + S F G + D AL A++N D L Sbjct: 106 EAFCGVGAVATTV---SRAFHGTQIHLGDHDETALGAARANVGAQATPHLLDCL-VGLPQ 161 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 ++ G FDVI + PPY+ L E +++P +L GG DGL R + L Sbjct: 162 ALTGSFDVISAVPPYVPDSAAQYLPHEAAEYEPATALFGGADGLDLVRRLITESRDWLAP 221 Query: 220 DGLCSVEIGYNQK 232 G+ +E+G Q+ Sbjct: 222 GGVLLIELGSQQQ 234 >gi|296128764|ref|YP_003636014.1| modification methylase, HemK family [Cellulomonas flavigena DSM 20109] gi|296020579|gb|ADG73815.1| modification methylase, HemK family [Cellulomonas flavigena DSM 20109] Length = 273 Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 49/191 (25%), Positives = 81/191 (42%), Gaps = 4/191 (2%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101 + R + E + LGW F +RL + F PR TELL +A+ + + + Sbjct: 55 VARRVAGEPLETALGWVAFAGLRLQVGPGVFVPRRRTELLARTAVDLAR---DAGPAPVV 111 Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 ++ G V ++ + P + D+ A+ A+ N G D L + + Sbjct: 112 VEACCGVAPVAALVVHDVPGARVHATDLDPAAVAWARRNLAGRGAVREGDLL-TPLPVRL 170 Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221 G DV+V+N PY+ + + E RD +PR++LDGG DG+ R + + G Sbjct: 171 RGHVDVLVANAPYVPHDAIATMPPEARDHEPRLALDGGRDGVDVQRRLLTLAPAWVRPGG 230 Query: 222 LCSVEIGYNQK 232 VE Q Sbjct: 231 YVLVETSTRQA 241 >gi|314955550|gb|EFS99953.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes HL027PA1] Length = 291 Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 67/256 (26%), Positives = 109/256 (42%), Gaps = 9/256 (3%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ LC + Q+I DD RF + R E I+G F +RL Sbjct: 28 DARMLLCEALRIQPSQLIRVASVNADDEDRF--NQMVDRRRSGEPAQDIIGHAWFRGLRL 85 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 + F PR ETEL+ + ++ + + ++DL TGTGA+ LA+ E P + Sbjct: 86 EVGPGVFIPRLETELVAEQSIQEARRLVMSGAFPSVIDLCTGTGAIALAVASEVPGSRVS 145 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCL 183 V++ AL + N +GV + L D + FDV+V+NPPY+ + Sbjct: 146 AVEVDDAALTWTRRNLCDSGV----EVLAGDALRVPDDSRRFDVVVTNPPYLRRSDASSI 201 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 EV + +P ++L G DGL + + L GL +E Q+ ++V + Sbjct: 202 PGEVTEHEPDLALFSGDDGLDLPLLLIGRAAELLTPSGLFVMEHDETQREELVAAMATSD 261 Query: 244 LF-LVNAFKDYGGNDR 258 ++ + D G R Sbjct: 262 MWEQIEDHDDLAGRPR 277 >gi|330817452|ref|YP_004361157.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Burkholderia gladioli BSR3] gi|327369845|gb|AEA61201.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Burkholderia gladioli BSR3] Length = 312 Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 53/156 (33%), Positives = 80/156 (51%), Gaps = 14/156 (8%) Query: 94 EKRDVVRILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVSER-- 149 + V +L+L TG+G CLA+L F VD+S ALE+A+ N G+ R Sbjct: 132 DPEQVGAVLELCTGSG--CLAVLAAEAFPHAEIDAVDLSEDALEVAEINISDYGLDHRIA 189 Query: 150 ------FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203 + L S+ + E +DVI+SNPPY+ + + L E R +P ++L GG DG+ Sbjct: 190 LHHGDLYAPLPSERLADPELRYDVILSNPPYVNADSMAALPDEYR-HEPEMALAGGDDGM 248 Query: 204 SHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 R I + L +DG+ VEIG N++ +V F Sbjct: 249 DIVRRILREAKKWLKEDGVLVVEIG-NERHNVEAAF 283 >gi|225022789|ref|ZP_03711981.1| hypothetical protein CORMATOL_02834 [Corynebacterium matruchotii ATCC 33806] gi|224944396|gb|EEG25605.1| hypothetical protein CORMATOL_02834 [Corynebacterium matruchotii ATCC 33806] Length = 293 Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 63/224 (28%), Positives = 91/224 (40%), Gaps = 9/224 (4%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101 I R E + ILG F + LT+ F PRPETE L D + + I Sbjct: 73 ITRRAHREPLQHILGTAPFGPLTLTVGPGVFIPRPETEQLAD----WVATHLGNTPNPLI 128 Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSDWFSS 160 +DL TG+GA+ L P V++S +AL +N GV+ D Sbjct: 129 IDLCTGSGAIAGYLAHACPDANIYAVELSPEALTYTHTNLDPLGVTIVAGDATNPTLLEH 188 Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220 + G +V+NPPY+ L EV DP +++ GG G+ + R L Sbjct: 189 LNGKATAVVTNPPYVPHTT--DLQPEVY-ADPPMAVFGGDTGMDVITRLIPTARRLLAPG 245 Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR-VLLFC 263 G+ + E DVV++ L V +D+ G R V C Sbjct: 246 GVFACEHDDTTGPDVVKLVAEAGLRQVTQHQDWAGQPRFVTAIC 289 >gi|319776557|ref|YP_004139045.1| adenine-specific methylase [Haemophilus influenzae F3047] gi|317451148|emb|CBY87381.1| conserved hypothetical adenine-specific methylase [Haemophilus influenzae F3047] Length = 314 Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 42/145 (28%), Positives = 80/145 (55%), Gaps = 3/145 (2%) Query: 96 RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155 +++ ILDL TG+G + +A P + +D+S AL +A+ N + + R +QS Sbjct: 140 QELHHILDLCTGSGCIAIACAYAFPNAEVDAIDLSVDALNVAEINISRHQLEHRVFPIQS 199 Query: 156 DWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214 + F+++ G +D+IV+NPPY++ + + E F+P ++L G DGL+ + I Sbjct: 200 NLFTNILGQKYDLIVTNPPYVDEEDLADMPEEFH-FEPELALGSGSDGLNITKQILKQAP 258 Query: 215 RHLNKDGLCSVEIGYNQKVDVVRIF 239 +L ++G+ E+G N V ++ + Sbjct: 259 DYLTENGVLVCEVG-NSMVSLIEQY 282 >gi|282859871|ref|ZP_06268959.1| putative protein-(glutamine-N5) methyltransferase, release factor-specific [Prevotella bivia JCVIHMP010] gi|282587274|gb|EFB92491.1| putative protein-(glutamine-N5) methyltransferase, release factor-specific [Prevotella bivia JCVIHMP010] Length = 285 Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 56/192 (29%), Positives = 84/192 (43%), Gaps = 12/192 (6%) Query: 38 LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLV-------DSALAFSL 90 L + R E + +LG +F + S PRPETE+LV ++ + L Sbjct: 54 LAEIVCRLAASEPVQYVLGRENFAGRTFHVESGVLIPRPETEMLVQWIEEDYNTPVCGLL 113 Query: 91 PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150 P ++ILD+GTG+G + + L + DIS AL IA+ NA+ G F Sbjct: 114 PPAP----LQILDIGTGSGCIAITLALDILNSSVAAWDISGDALLIARDNALRLGAKVNF 169 Query: 151 DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL-DGGIDGLSHYRTI 209 + + + +D+IVSNPPYI + + V +P +L D L Y I Sbjct: 170 QLQDALSIEATDRCWDIIVSNPPYICEKECEAMAENVLQHEPHTALFVPNDDPLRFYTAI 229 Query: 210 ADGVSRHLNKDG 221 A + L K G Sbjct: 230 AKLGKKTLTKGG 241 >gi|148652735|ref|YP_001279828.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Psychrobacter sp. PRwf-1] gi|148571819|gb|ABQ93878.1| modification methylase, HemK family [Psychrobacter sp. PRwf-1] Length = 394 Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 44/133 (33%), Positives = 72/133 (54%), Gaps = 7/133 (5%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 RILDL TG+G C+A+ S F + DI ALE+A N +G+ + + ++SD Sbjct: 214 RILDLCTGSG--CIAIALASRFRDALVDAADIDNSALEVAAVNVEHHGMEHQLNLIESDL 271 Query: 158 FSSV--EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215 F + E +++IV+NPPY+++ + L E +P +L G DGL I + + Sbjct: 272 FEKIPAENQYELIVTNPPYVDAAAMAELPPEFI-HEPEHALAAGQDGLDLVHKILNEAAD 330 Query: 216 HLNKDGLCSVEIG 228 +L+ +GL E+G Sbjct: 331 YLSPEGLLVCEVG 343 >gi|33519950|ref|NP_878782.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Candidatus Blochmannia floridanus] gi|33504296|emb|CAD83188.1| predicted rRNA or tRNA methylase [Candidatus Blochmannia floridanus] Length = 303 Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 42/156 (26%), Positives = 81/156 (51%), Gaps = 3/156 (1%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LDL TG+G + +A+ P K DIS AL++A+ N + ++ + + SD F++ Sbjct: 129 VLDLCTGSGCIAIAIATIYPKSKIDASDISIHALKVAEHNIQLHNLAHQILPIHSDLFNN 188 Query: 161 VEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 + + +D+I++NPPY+ ++++ L E +P ++L +GL I ++ +LN Sbjct: 189 IPLIKYDLIITNPPYVSNIVMRKLPKEFLH-EPTLALSANSNGLEIIHRILINITNYLNT 247 Query: 220 DGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGG 255 +G+ E G K V++ + + N GG Sbjct: 248 NGILICETGI-SKNSVIQYYPNTPFHWFNFNHKDGG 282 >gi|153951215|ref|YP_001398334.1| HemK family modification methylase [Campylobacter jejuni subsp. doylei 269.97] gi|152938661|gb|ABS43402.1| modification methylase, HemK family [Campylobacter jejuni subsp. doylei 269.97] Length = 271 Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 70/255 (27%), Positives = 115/255 (45%), Gaps = 23/255 (9%) Query: 11 LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKH-ESIHRILGWRDFYNVRLTLSS 69 LC + ++ D +D F +VR K E I DF+ + + Sbjct: 25 LCEYLKKDKAWLFLNQDIEIDHEPYF----ELVRRFKSGEPFEYIFEKVDFWGLEFKIKK 80 Query: 70 DTFEPRPETELLVDSALAFSLPRIEKRDVVR-ILDLGTGTGAVCLALLKESPFFKGVGVD 128 PR ++E+L+ F + + K++ IL++G G+G + + L KE K D Sbjct: 81 GVLIPRYDSEILL-----FQILNLCKKNTFNGILEIGFGSGILSIILAKELGL-KITACD 134 Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE-SVIVDCLGLEV 187 I+ KALE+A NA + V D + F +E +D I SNPPYI+ S +D + Sbjct: 135 INPKALELALENAKLHKVDHLIDFKLCN-FKQIEENYDFIFSNPPYIKNSYPIDIWVQK- 192 Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD-GLCSVEIGYNQKVDVVRIFESRKLFL 246 +P+ +L GG G Y + + + L+K + E GY+QK + +I F+ Sbjct: 193 ---EPKEALFGGEKG---YEILEEIIHFSLDKKVKFLACEFGYDQKEILEKILYQNN-FI 245 Query: 247 VNAFKDYGGNDRVLL 261 V+ FKD +R + Sbjct: 246 VDFFKDEQDYNRAFI 260 >gi|311278709|ref|YP_003940940.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Enterobacter cloacae SCF1] gi|308747904|gb|ADO47656.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Enterobacter cloacae SCF1] Length = 310 Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 44/130 (33%), Positives = 70/130 (53%), Gaps = 2/130 (1%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ILD+ TG+G + +A P + GVDIS AL +A+ N +G+ ++SD F Sbjct: 135 HILDMCTGSGCIAIACAYAFPEAEVDGVDISPDALAVAERNIEEHGLIHNVTPIRSDLFR 194 Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 + + +D+IV+NPPY+++ + L E R +P + L G DGL R I +L+ Sbjct: 195 DLPQVQYDLIVTNPPYVDAEDMADLPGEYR-HEPELGLASGTDGLKLTRRILACAPDYLS 253 Query: 219 KDGLCSVEIG 228 DG+ E+G Sbjct: 254 DDGILICEVG 263 >gi|260910407|ref|ZP_05917079.1| protein-(glutamine-N5) methyltransferase [Prevotella sp. oral taxon 472 str. F0295] gi|260635483|gb|EEX53501.1| protein-(glutamine-N5) methyltransferase [Prevotella sp. oral taxon 472 str. F0295] Length = 284 Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 53/179 (29%), Positives = 76/179 (42%), Gaps = 7/179 (3%) Query: 16 GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75 GLS V D + L L + + ++ + +LG +F + PR Sbjct: 32 GLSLADVYADKVTQLSQDDARLLHKMMDKLVQGVPVQYVLGRAEFAGRTFEVGQGVLIPR 91 Query: 76 PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135 PETE L + R +LD+GTG+G + L + P ++ +DIS KALE Sbjct: 92 PETEELCTWIVQVCKDRATTGTSPTLLDIGTGSGCIATTLALDLPTWRVSAIDISQKALE 151 Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194 IA NA +F + L+DVIVSNPPY I+ C E R P + Sbjct: 152 IATRNAQKLDAEVQFALQDALSMPPDTNLWDVIVSNPPY----IMQC---EARQMQPNV 203 >gi|254172001|ref|ZP_04878677.1| methylase, putative [Thermococcus sp. AM4] gi|214033897|gb|EEB74723.1| methylase, putative [Thermococcus sp. AM4] Length = 193 Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 40/116 (34%), Positives = 67/116 (57%), Gaps = 11/116 (9%) Query: 60 FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119 +Y +R+ L +EP +T LL ++ ++ + LD+GTGTG + L + +++ Sbjct: 4 YYGLRILLDDSVYEPAEDTFLLAET--------VDVKPGEIALDIGTGTGIIALLMARKA 55 Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYI 175 +GVD++ KA+E+A+ NA+ NG+ E SD F +VEG FDV+ N PY+ Sbjct: 56 KHV--LGVDVNPKAIELARKNALLNGI-ENVKFRLSDLFENVEGEFDVVTFNAPYL 108 >gi|118474800|ref|YP_891733.1| bifunctional methyltransferase [Campylobacter fetus subsp. fetus 82-40] gi|118414026|gb|ABK82446.1| bifunctional methyltransferase [Campylobacter fetus subsp. fetus 82-40] Length = 261 Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 59/201 (29%), Positives = 97/201 (48%), Gaps = 15/201 (7%) Query: 59 DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118 DF + + PR ETE+LV ++ + + + + I ++G G+G + ++L K Sbjct: 69 DFLDYEFEVGRGVLVPRYETEILVQKVVSIA----KNLENISICEIGIGSGVISISLAKI 124 Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYI-ES 177 K DIS AL+ A+ N GV + + + + VEG FD+IVSNPPYI + Sbjct: 125 LKNCKFTATDISEDALKYARKNISKFGV--QIELFNTSFLDGVEGDFDIIVSNPPYIAKD 182 Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237 +D + +P +L GG G + I + +++ K +C E+GY+QK + Sbjct: 183 YKLDKWVMS----EPSQALFGGEKGDEILKKIVN-LAKDRTKFLVC--EMGYDQKASLSN 235 Query: 238 IFESRKLFLVNAFKDYGGNDR 258 E + F +KD G DR Sbjct: 236 ELE-KAGFKFEFYKDLAGFDR 255 >gi|146312520|ref|YP_001177594.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Enterobacter sp. 638] gi|145319396|gb|ABP61543.1| [LSU ribosomal protein L3P]-glutamine N5-methyltransferase [Enterobacter sp. 638] Length = 310 Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 43/130 (33%), Positives = 67/130 (51%), Gaps = 2/130 (1%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ILD+ TG+G + +A P + VDIS AL + + N +G+ ++SD F Sbjct: 135 HILDMCTGSGCIAIACAYAYPEAEVDAVDISTDALAVTEHNIEEHGLIHHVTPIRSDLFR 194 Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 + L +D+IV+NPPY+++ + L E R +P + L G DGL R I +L Sbjct: 195 DLPKLQYDLIVTNPPYVDAEDMSDLPNEYR-HEPELGLASGTDGLKLTRRILACAPDYLT 253 Query: 219 KDGLCSVEIG 228 DG+ E+G Sbjct: 254 DDGILICEVG 263 >gi|242398027|ref|YP_002993451.1| N5-glutamine methyltransferase, HemK family [Thermococcus sibiricus MM 739] gi|242264420|gb|ACS89102.1| N5-glutamine methyltransferase, HemK family [Thermococcus sibiricus MM 739] Length = 199 Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 52/173 (30%), Positives = 89/173 (51%), Gaps = 25/173 (14%) Query: 54 ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113 +L +RD +++ L +EP +T LL ++ + +D LD+GTGTG + L Sbjct: 1 MLYYRD---LKIKLHPHVYEPAEDTFLLAENLMI--------KDGDFALDMGTGTGIIAL 49 Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEGLFDVIVSNP 172 + K++ F +GVD++ A+E+AK NA NG++ +F QSD F +V G FD+I N Sbjct: 50 LMAKKAKFV--LGVDVNPIAVELAKENARLNGITNVKFK--QSDLFQNVGGKFDIITFNA 105 Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225 PY+ + + L +L GG +G + V +L ++G+ + Sbjct: 106 PYLPGEPEELIDL---------ALVGGREGREVLDRFIEEVDGYLTENGIIQI 149 >gi|52548592|gb|AAU82441.1| HemK related protein [uncultured archaeon GZfos17F1] Length = 205 Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 37/126 (29%), Positives = 72/126 (57%), Gaps = 11/126 (8%) Query: 58 RDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117 + + ++ L+ +EP ++ LL+D+AL + ++ +RI+++GTG+G V A+++ Sbjct: 5 QSHHGYQIHLTGAVYEPAEDSYLLIDAALNEIVGSNQR---LRIIEIGTGSGIVTAAMMR 61 Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIES 177 ++P + DIS A+ AK+N R +++D FS + G FD+IV N PY+ + Sbjct: 62 DAPEHRYAATDISPHAVACAKAN--------RVPVVRADLFSGIRGRFDLIVFNAPYLPT 113 Query: 178 VIVDCL 183 +C+ Sbjct: 114 APDECV 119 >gi|315231778|ref|YP_004072214.1| N5-glutamine methyltransferase [Thermococcus barophilus MP] gi|315184806|gb|ADT84991.1| N5-glutamine methyltransferase [Thermococcus barophilus MP] Length = 200 Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 43/116 (37%), Positives = 68/116 (58%), Gaps = 11/116 (9%) Query: 60 FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119 + ++L L S +EP +T LL ++ +I + D+ LD+GTGTG + L + K++ Sbjct: 6 YKGIKLKLHSQVYEPAEDTFLLAENL------KIREGDIA--LDVGTGTGIIALLMAKKA 57 Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYI 175 F +GVDI+ A+E+AK NA N + + + SD F +VEG FD+I N PY+ Sbjct: 58 KFV--LGVDINPIAVELAKENARINEI-KNVEFRVSDLFENVEGKFDIITFNSPYL 110 >gi|313141021|ref|ZP_07803214.1| methylase of polypeptide chain release factors [Bifidobacterium bifidum NCIMB 41171] gi|313133531|gb|EFR51148.1| methylase of polypeptide chain release factors [Bifidobacterium bifidum NCIMB 41171] Length = 321 Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 68/249 (27%), Positives = 103/249 (41%), Gaps = 16/249 (6%) Query: 27 DSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL 86 D+V RF I R E + I G F + L + F PRPETE +V + + Sbjct: 77 DAVTTALARFHAM--IARRAAREPLQYITGHAPFRYLDLEVGPGVFIPRPETETVVQAGI 134 Query: 87 AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN------ 140 + L R E+ RI+DL G+GA+ L+L+ E + V+ + + N Sbjct: 135 DW-LTR-ERLSTPRIVDLCAGSGAIGLSLVTEVRGAQVWAVEKVPRTYDWTMRNWRRISR 192 Query: 141 ----AVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL 196 A N E D + +G D++V+NPPYI + EVRD DP+ +L Sbjct: 193 LDPLAADNYHLELGDATSGTTLTQFDGTIDMVVTNPPYIPEAQIPEQ-PEVRDHDPKAAL 251 Query: 197 DGG-IDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGG 255 GG DG I + L G+ +E +Q +V ++ + D+ G Sbjct: 252 YGGSADGTLIPERIVMRAAGLLRPGGVLVMEHDISQGPRMVSFAQANGFGQAHTGDDWTG 311 Query: 256 NDRVLLFCR 264 R L R Sbjct: 312 RPRYLFAVR 320 >gi|313675595|ref|YP_004053591.1| protein-(glutamine-n5) methyltransferase, release factor-specific [Marivirga tractuosa DSM 4126] gi|312942293|gb|ADR21483.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Marivirga tractuosa DSM 4126] Length = 281 Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 64/211 (30%), Positives = 97/211 (45%), Gaps = 9/211 (4%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110 I ILG +FY + ++ + PR ETE LV L + P + ++ VV D+GTG+G Sbjct: 71 IQHILGKVEFYGRQFLVNPNVLIPRRETEELVHLILE-NHPDLSEQMVV---DIGTGSGI 126 Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL--FDVI 168 + + + KE + VDIS AL AK NA N + F +Q+D L ++ Sbjct: 127 IPITIAKERKHCEVYAVDISSSALATAKRNAQLNHANINF--IQADILEEELELPKSNIW 184 Query: 169 VSNPPYIESVIVDCLGLEVRDFDPRISL-DGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227 VSNPPY+ + +V + +P +L D L Y I+ +HL G EI Sbjct: 185 VSNPPYVLEKEKAEMQPKVFEHEPSNALFVPDHDALIFYERISMLAFKHLVSGGELYFEI 244 Query: 228 GYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258 +V +I E + V +D G +R Sbjct: 245 NEQFGREVKKIMEDKGFQDVKVMRDMQGKNR 275 >gi|308184812|ref|YP_003928945.1| S-adenosylmethionine-dependent methyltransferase [Helicobacter pylori SJM180] gi|308060732|gb|ADO02628.1| S-adenosylmethionine-dependent methyltransferase [Helicobacter pylori SJM180] Length = 276 Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 66/233 (28%), Positives = 104/233 (44%), Gaps = 31/233 (13%) Query: 35 RFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIE 94 RFF + + L I +LG DFY ++ PRPETE+LV AL I Sbjct: 55 RFF--KLVGKRLNDCPIEYLLGSCDFYGRSFFVNEHVLIPRPETEILVQKALDV----IS 108 Query: 95 KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154 + + + ++G G+G V ++L E+P DIS KAL++A N + ER Q Sbjct: 109 QYHLKEVGEIGIGSGCVSVSLALENPNLSIYASDISPKALKVALKNIERFNLKERVFLKQ 168 Query: 155 SDWFSSVEGLFDVIVSNPPYI------ESVIVDCLGLEVRDFDPRISLDGGIDG---LSH 205 + + + + +++VSNPPYI E ++ +P +L GG+ G L Sbjct: 169 THLWDHMP-MIEMLVSNPPYIARNYPLEKSVLK---------EPHKALFGGVKGDEILKE 218 Query: 206 YRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258 +A G+ K + E+GY+Q + E + +KD G DR Sbjct: 219 IVFLAAGL-----KIPFLACEMGYDQLKSLKECLEFCG-YDAEFYKDLSGFDR 265 >gi|114563834|ref|YP_751347.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Shewanella frigidimarina NCIMB 400] gi|114335127|gb|ABI72509.1| modification methylase, HemK family protein [Shewanella frigidimarina NCIMB 400] Length = 314 Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 57/176 (32%), Positives = 91/176 (51%), Gaps = 7/176 (3%) Query: 91 PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150 P + + V RILDL TG+ + +A + +DIS ALE+A+ N + GV +R Sbjct: 127 PWLYNKPVNRILDLCTGSACIAIACAYAFEDAEVDALDISEDALEVAQINIESLGVLDRV 186 Query: 151 DTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208 +QSD FS++ +D+IVSNPPY+++ + + E +P I L G DGL + Sbjct: 187 FPMQSDLFSAIPKGQHYDLIVSNPPYVDAQDIGDMPDEYH-HEPAIGLASGNDGLDLTKR 245 Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 I + +L + GL VE+G N V ++ + V+ ++GG D V + R Sbjct: 246 ILANAADYLTETGLLVVEVG-NSMVHLIEQYPDMPFTWVDF--EFGG-DGVFVLTR 297 >gi|255324517|ref|ZP_05365634.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Corynebacterium tuberculostearicum SK141] gi|255298423|gb|EET77723.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Corynebacterium tuberculostearicum SK141] Length = 278 Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 51/190 (26%), Positives = 83/190 (43%), Gaps = 23/190 (12%) Query: 44 RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103 R E + +LG F + L + F PRPETE++ D A + + R++D Sbjct: 63 RREAREPLQYVLGSAWFGPLELKVGPGVFIPRPETEVMADWA-------VHNAEGPRLVD 115 Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVE 162 L TGTGA+ L L P + V+++ AL ++N GV + D D + Sbjct: 116 LCTGTGALALYLAHYLPEAQVRAVELADAALAYTQTNTRNTGVEVIQADATAGDTLADWN 175 Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD------GGIDGLSHYRTIADGVSRH 216 G D++V+NPPY+ E D +P + D G DG+ + ++R Sbjct: 176 GTVDLLVTNPPYVP---------ETPDLEPEVYHDPHNAVFAGADGMGVITGLIPTIARL 226 Query: 217 LNKDGLCSVE 226 + G ++E Sbjct: 227 VRPGGKVAIE 236 >gi|257453414|ref|ZP_05618709.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Enhydrobacter aerosaccus SK60] gi|257449166|gb|EEV24114.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Enhydrobacter aerosaccus SK60] Length = 389 Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 43/131 (32%), Positives = 68/131 (51%), Gaps = 3/131 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+LDL TG+G + +AL P DI ALE+A N + ++ + + ++S+ F Sbjct: 211 RMLDLCTGSGCIAIALASRFPDAMVDASDIDKNALEVAAVNVDHHHMNHQVNLIESNLFE 270 Query: 160 SV--EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217 V E +D+IV+NPPY+++ + L E +P +L G DGL I +L Sbjct: 271 KVPAENQYDLIVTNPPYVDAATMADLPPEFL-HEPDHALAAGQDGLDLVHHILYNAPDYL 329 Query: 218 NKDGLCSVEIG 228 +DGL E+G Sbjct: 330 TRDGLLVCEVG 340 >gi|309973336|gb|ADO96537.1| 50S subunit L3 protein glutamine methyltransferase [Haemophilus influenzae R2846] Length = 314 Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 43/141 (30%), Positives = 77/141 (54%), Gaps = 3/141 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ILDL TG+G + +A P + VD+S AL +A+ N + + R +QS+ F Sbjct: 144 HILDLCTGSGCIAIACAYAFPNAEVDAVDLSVDALNVAEINISRHQLEHRVFPIQSNLFE 203 Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 ++ G +D+IV+NPPY++ + + E F+P ++L G DGL+ + I +L+ Sbjct: 204 NILGQKYDLIVTNPPYVDEEDLADMPEEFH-FEPELALGSGHDGLNITKQILKQAPDYLS 262 Query: 219 KDGLCSVEIGYNQKVDVVRIF 239 ++G+ E+G N V ++ + Sbjct: 263 ENGVLVCEVG-NSMVSLIEQY 282 >gi|224283866|ref|ZP_03647188.1| modification methylase, HemK family protein [Bifidobacterium bifidum NCIMB 41171] gi|311064751|ref|YP_003971476.1| peptide release factor-glutamine N5-methyltransferase [Bifidobacterium bifidum PRL2010] gi|310867070|gb|ADP36439.1| HemK Peptide release factor-glutamine N5-methyltransferase [Bifidobacterium bifidum PRL2010] Length = 329 Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 68/249 (27%), Positives = 103/249 (41%), Gaps = 16/249 (6%) Query: 27 DSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL 86 D+V RF I R E + I G F + L + F PRPETE +V + + Sbjct: 85 DAVTTALARFHAM--IARRAAREPLQYITGHAPFRYLDLEVGPGVFIPRPETETVVQAGI 142 Query: 87 AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN------ 140 + L R E+ RI+DL G+GA+ L+L+ E + V+ + + N Sbjct: 143 DW-LTR-ERLSTPRIVDLCAGSGAIGLSLVTEVRGAQVWAVEKVPRTYDWTMRNWRRISR 200 Query: 141 ----AVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL 196 A N E D + +G D++V+NPPYI + EVRD DP+ +L Sbjct: 201 LDPLAADNYHLELGDATSGTTLTQFDGTIDMVVTNPPYIPEAQIPEQ-PEVRDHDPKAAL 259 Query: 197 DGG-IDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGG 255 GG DG I + L G+ +E +Q +V ++ + D+ G Sbjct: 260 YGGSADGTLIPERIVMRAAGLLRPGGVLVMEHDISQGPRMVSFAQANGFGQAHTGDDWTG 319 Query: 256 NDRVLLFCR 264 R L R Sbjct: 320 RPRYLFAVR 328 >gi|304373117|ref|YP_003856326.1| Protein-(Glutamine-N5) methyltransferase, release factor-specific [Mycoplasma hyorhinis HUB-1] gi|304309308|gb|ADM21788.1| Protein-(Glutamine-N5) methyltransferase, release factor-specific [Mycoplasma hyorhinis HUB-1] Length = 243 Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 56/180 (31%), Positives = 88/180 (48%), Gaps = 14/180 (7%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110 I +I+G+ N++L ++ PR ETE L+ A + I + V LDLG G+G Sbjct: 42 IQKIIGFVCMQNLQLKINKKVLIPRYETEELILQAYKY----INGQSTV--LDLGCGSGF 95 Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIV 169 + LA+ K + + V DI +A+ +K NA N + + +QSD F +++ FDVI+ Sbjct: 96 IGLAIAKNTKAKQVVLSDIDSQAILQSKINAKLNKL--KVKIIQSDLFDNLKKYKFDVII 153 Query: 170 SNPPYI--ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227 NPPY+ E +D V D++P +L G Y+ I L G+ EI Sbjct: 154 CNPPYLDFEKSKLDS---SVLDYEPWNALFAKQKGNYFYQKILKQYKNFLKPKGVILFEI 210 >gi|62180957|ref|YP_217374.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|62128590|gb|AAX66293.1| putative methylase [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|322715437|gb|EFZ07008.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 310 Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 43/129 (33%), Positives = 69/129 (53%), Gaps = 2/129 (1%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 ILD+ TG+G + +A P + VDIS AL +A+ N +G+ ++SD F Sbjct: 136 ILDMCTGSGCIAIACAYAFPDAEVDAVDISPDALAVAEHNIEEHGLIHHVTPIRSDLFRD 195 Query: 161 VEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 + + +D+IV+NPPY+++ + L E R +P + L G DGL R I +L+ Sbjct: 196 LPKVQYDLIVTNPPYVDAEDMSDLPNEYR-HEPELGLASGTDGLKLTRRILGNAPDYLSD 254 Query: 220 DGLCSVEIG 228 DG+ E+G Sbjct: 255 DGVLICEVG 263 >gi|283477747|emb|CAY73663.1| putative adenine-specific methylase [Erwinia pyrifoliae DSM 12163] Length = 310 Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 47/166 (28%), Positives = 82/166 (49%), Gaps = 6/166 (3%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ILD+ TG+G + +A P + VDIS AL + + N +G+ + ++ D F Sbjct: 135 HILDMCTGSGCIAIACAWAFPQAEVDAVDISDDALAVTEQNISAHGLEQHVTPIRCDLFR 194 Query: 160 SV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 + + +D+IV+NPPY+++ +D L E R +P + L G DGL+ R I + +L+ Sbjct: 195 ELPKTQYDLIVTNPPYVDADDMDDLPNEYR-HEPELGLAAGNDGLTLTRRILGCAAEYLS 253 Query: 219 KDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 + G+ E+G + +V + E + G D V + R Sbjct: 254 EQGVLICEVGNS----MVHLIEQYPDVPFTWLEFENGGDGVFMLTR 295 >gi|145637044|ref|ZP_01792707.1| N5-glutamine methyltransferase [Haemophilus influenzae PittHH] gi|145269698|gb|EDK09638.1| N5-glutamine methyltransferase [Haemophilus influenzae PittHH] Length = 314 Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 43/141 (30%), Positives = 77/141 (54%), Gaps = 3/141 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ILDL TG+G + +A P + VD+S AL +A+ N + + R +QS+ F Sbjct: 144 HILDLCTGSGCIAIACAYAFPNAEVDAVDLSVDALNVAEINISRHQLEHRVFPIQSNLFE 203 Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 ++ G +D+IV+NPPY++ + + E F+P ++L G DGL+ + I +L+ Sbjct: 204 NILGQKYDLIVTNPPYVDEEDLADMPEEFH-FEPELALGSGHDGLNITKQILKQAPDYLS 262 Query: 219 KDGLCSVEIGYNQKVDVVRIF 239 ++G+ E+G N V ++ + Sbjct: 263 ENGVLVCEVG-NSMVSLIEQY 282 >gi|220913096|ref|YP_002488405.1| modification methylase, HemK family [Arthrobacter chlorophenolicus A6] gi|219859974|gb|ACL40316.1| modification methylase, HemK family [Arthrobacter chlorophenolicus A6] Length = 288 Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 51/155 (32%), Positives = 74/155 (47%), Gaps = 7/155 (4%) Query: 50 SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109 + I G F + L + F PRPETE +V + + +D RI+DLGTG+G Sbjct: 71 PLQHITGVAHFRYLELAVGPGVFIPRPETESVVQ----LVIDHVAGKDAPRIVDLGTGSG 126 Query: 110 AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIV 169 A+ ++ E P + V+ S A A N GV L++ + G FDV++ Sbjct: 127 AIAGSIAHEVPGAEVHAVEFSPLAHAWAARNLEPLGVRLVLGDLRTA-LPELNGTFDVVI 185 Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISL-DGGIDGL 203 SNPPYI + + EV DP +L GG DG+ Sbjct: 186 SNPPYIPAEAIPNE-PEVALHDPPEALYGGGADGM 219 >gi|161612878|ref|YP_001586844.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|161362242|gb|ABX66010.1| hypothetical protein SPAB_00584 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] Length = 310 Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 43/129 (33%), Positives = 69/129 (53%), Gaps = 2/129 (1%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 ILD+ TG+G + +A P + VDIS AL +A+ N +G+ ++SD F Sbjct: 136 ILDMCTGSGCIAIACAYAFPDAEVDAVDISPDALAVAEHNIEEHGLIHHVTPIRSDLFRD 195 Query: 161 VEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 + + +D+IV+NPPY+++ + L E R +P + L G DGL R I +L+ Sbjct: 196 LPKVQYDLIVTNPPYVDAEDMSDLPNEYR-HEPELGLASGTDGLKLTRRILGNAPDYLSD 254 Query: 220 DGLCSVEIG 228 DG+ E+G Sbjct: 255 DGVLICEVG 263 >gi|16761309|ref|NP_456926.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|16765712|ref|NP_461327.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|29140995|ref|NP_804337.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|207857803|ref|YP_002244454.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|213160946|ref|ZP_03346656.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213426187|ref|ZP_03358937.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213582768|ref|ZP_03364594.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] gi|213616434|ref|ZP_03372260.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] gi|213650420|ref|ZP_03380473.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|213857263|ref|ZP_03384234.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|224583126|ref|YP_002636924.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|289826755|ref|ZP_06545700.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|61250532|sp|P0A293|YFCB_SALTY RecName: Full=Uncharacterized adenine-specific methylase yfcB gi|61250534|sp|P0A294|YFCB_SALTI RecName: Full=Uncharacterized adenine-specific methylase yfcB gi|25512989|pir||AG0804 conserved hypothetical protein STY2617 [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16420929|gb|AAL21286.1| putative methylase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|16503608|emb|CAD07617.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Typhi] gi|29136620|gb|AAO68186.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|206709606|emb|CAR33951.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|224467653|gb|ACN45483.1| hypothetical protein SPC_1320 [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|261247591|emb|CBG25418.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267994488|gb|ACY89373.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301158943|emb|CBW18456.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312913376|dbj|BAJ37350.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|320086818|emb|CBY96590.1| putative adenine-specific methylase [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|321222913|gb|EFX47984.1| Ribosomal protein L3 methyltransferase [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|323130718|gb|ADX18148.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|326624209|gb|EGE30554.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Dublin str. 3246] gi|332989318|gb|AEF08301.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 310 Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 43/129 (33%), Positives = 69/129 (53%), Gaps = 2/129 (1%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 ILD+ TG+G + +A P + VDIS AL +A+ N +G+ ++SD F Sbjct: 136 ILDMCTGSGCIAIACAYAFPDAEVDAVDISPDALAVAEHNIEEHGLIHHVTPIRSDLFRD 195 Query: 161 VEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 + + +D+IV+NPPY+++ + L E R +P + L G DGL R I +L+ Sbjct: 196 LPKVQYDLIVTNPPYVDAEDMSDLPNEYR-HEPELGLASGTDGLKLTRRILGNAPDYLSD 254 Query: 220 DGLCSVEIG 228 DG+ E+G Sbjct: 255 DGVLICEVG 263 >gi|310768216|gb|ADP13166.1| putative adenine-specific methylase [Erwinia sp. Ejp617] Length = 310 Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 47/166 (28%), Positives = 82/166 (49%), Gaps = 6/166 (3%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ILD+ TG+G + +A P + VDIS AL + + N +G+ + ++ D F Sbjct: 135 HILDMCTGSGCIAIACAWAFPQAEVDAVDISDDALAVTEQNISAHGLEQHVTPIRCDLFR 194 Query: 160 SV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 + + +D+IV+NPPY+++ +D L E R +P + L G DGL+ R I + +L+ Sbjct: 195 ELPKTQYDLIVTNPPYVDADDMDDLPNEYR-HEPELGLAAGNDGLTLTRRILGCAAEYLS 253 Query: 219 KDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 + G+ E+G + +V + E + G D V + R Sbjct: 254 EQGVLICEVGNS----MVHLIEQYPDVPFTWLEFENGGDGVFMLTR 295 >gi|238912336|ref|ZP_04656173.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] Length = 310 Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 43/129 (33%), Positives = 69/129 (53%), Gaps = 2/129 (1%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 ILD+ TG+G + +A P + VDIS AL +A+ N +G+ ++SD F Sbjct: 136 ILDMCTGSGCIAIACAYAFPDAEVDAVDISPDALAVAEHNIEEHGLIHHVTPIRSDLFRD 195 Query: 161 VEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 + + +D+IV+NPPY+++ + L E R +P + L G DGL R I +L+ Sbjct: 196 LPKVQYDLIVTNPPYVDAEDMSDLPNEYR-HEPELGLASGTDGLKLTRRILGNAPDYLSD 254 Query: 220 DGLCSVEIG 228 DG+ E+G Sbjct: 255 DGVLICEVG 263 >gi|110642534|ref|YP_670264.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli 536] gi|110344126|gb|ABG70363.1| hypothetical adenine-specific methylase YfcB [Escherichia coli 536] Length = 421 Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 43/130 (33%), Positives = 69/130 (53%), Gaps = 2/130 (1%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ILD+ TG+G + +A P + VDIS AL +A+ N +G+ ++SD F Sbjct: 246 HILDMCTGSGCIAIACAYAFPEAEVDAVDISPDALAVAEQNIEEHGLIHNVIPIRSDLFR 305 Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 + + +D+IV+NPPY+++ + L E R +P + L G DGL R I + +L Sbjct: 306 DLPKVQYDLIVTNPPYVDAEDMSDLPNEYR-HEPELGLASGTDGLKLTRRILGNAADYLA 364 Query: 219 KDGLCSVEIG 228 DG+ E+G Sbjct: 365 DDGVLICEVG 374 >gi|205353498|ref|YP_002227299.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205273279|emb|CAR38244.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|326628591|gb|EGE34934.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 310 Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 43/129 (33%), Positives = 69/129 (53%), Gaps = 2/129 (1%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 ILD+ TG+G + +A P + VDIS AL +A+ N +G+ ++SD F Sbjct: 136 ILDMCTGSGCIAIACAYAFPDAEVDAVDISPDALAVAEHNIEEHGLIHHVTPIRSDLFRD 195 Query: 161 VEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 + + +D+IV+NPPY+++ + L E R +P + L G DGL R I +L+ Sbjct: 196 LPKVQYDLIVTNPPYVDAEDMSDLPNEYR-HEPELGLASGTDGLKLTRRILGNAPDYLSD 254 Query: 220 DGLCSVEIG 228 DG+ E+G Sbjct: 255 DGVLICEVG 263 >gi|256833003|ref|YP_003161730.1| modification methylase, HemK family [Jonesia denitrificans DSM 20603] gi|256686534|gb|ACV09427.1| modification methylase, HemK family [Jonesia denitrificans DSM 20603] Length = 318 Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 65/233 (27%), Positives = 97/233 (41%), Gaps = 13/233 (5%) Query: 38 LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97 LT R E + + G F + L + + F PRPETELL + A+ + Sbjct: 77 LTQLAQRREHREPLQHLTGIAYFRRLSLEVGAGVFIPRPETELLAEHAITEAHRIAANGT 136 Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD- 156 ++DL TG+GA+ LA+ E P + V++ A A N + ++ Q D Sbjct: 137 QPVVVDLCTGSGAIALAIATEVPSAQVYAVELDQGAYTWATRN--NHRYADPVHLTQGDA 194 Query: 157 --WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG-GIDGLSHYRTIADGV 213 S + D++VSNPPYI S + EV DP ++L G G DGL R + Sbjct: 195 RTALSHMAARVDIVVSNPPYIPSDAI-PRDHEVAHHDPAVALYGLGDDGLEVPRGVTMNA 253 Query: 214 SRHLNKDGLCSVEIGYNQK------VDVVRIFESRKLFLVNAFKDYGGNDRVL 260 + L GL +E +Q VD + L D G R++ Sbjct: 254 ALLLRPQGLYVMEHADSQADAARAMVDGTTLGGDAAFTLAKTHADLTGRPRMV 306 >gi|296393117|ref|YP_003658001.1| HemK family modification methylase [Segniliparus rotundus DSM 44985] gi|296180264|gb|ADG97170.1| modification methylase, HemK family [Segniliparus rotundus DSM 44985] Length = 286 Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 64/215 (29%), Positives = 93/215 (43%), Gaps = 10/215 (4%) Query: 50 SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109 + +LG F +V + + F PRPETE L ALA R+ + +LDL +G+G Sbjct: 69 PLQHLLGKVFFASVEVFVGPGVFIPRPETEQLHVWALAMLRARLWEIPEPVVLDLCSGSG 128 Query: 110 AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD-----WFSSVEGL 164 ++ L++ + P K V+ +AL + NA N D + D + G Sbjct: 129 SLGLSIARSVPEAKVALVENDPEALVWTRRNA--NTPDADVDVVGGDVTDVALLAERNGA 186 Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224 DVIV+NPPY+ + EV DFDP ++ G DGL + V+R L G Sbjct: 187 VDVIVANPPYVPAGTPTP--PEVADFDPPQAVFAGPDGLDVITGLVGNVARWLKPGGAFG 244 Query: 225 VEIGYNQKVDVVRIFESRKLFL-VNAFKDYGGNDR 258 VE V +F + F V D G R Sbjct: 245 VEHDEGHADQVRGLFAHDERFCEVKTMNDLSGRPR 279 >gi|56412718|ref|YP_149793.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197361652|ref|YP_002141288.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|56126975|gb|AAV76481.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197093128|emb|CAR58572.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] Length = 310 Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 43/129 (33%), Positives = 69/129 (53%), Gaps = 2/129 (1%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 ILD+ TG+G + +A P + VDIS AL +A+ N +G+ ++SD F Sbjct: 136 ILDMCTGSGCIAIACAYAFPDAEVDAVDISPDALAVAEHNIEEHGLIHHVTPIRSDLFRD 195 Query: 161 VEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 + + +D+IV+NPPY+++ + L E R +P + L G DGL R I +L+ Sbjct: 196 LPKVQYDLIVTNPPYVDAEDMSDLPNEYR-HEPELGLASGTDGLKLTRRILGNAPDYLSD 254 Query: 220 DGLCSVEIG 228 DG+ E+G Sbjct: 255 DGVLICEVG 263 >gi|82777741|ref|YP_404089.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Shigella dysenteriae Sd197] gi|81241889|gb|ABB62599.1| putative adenine-specific methylase [Shigella dysenteriae Sd197] Length = 421 Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 43/130 (33%), Positives = 69/130 (53%), Gaps = 2/130 (1%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ILD+ TG+G + +A P + VDIS AL +A+ N +G+ ++SD F Sbjct: 246 HILDMCTGSGCIAIACAYAFPEAEVDAVDISPDALAVAEQNIEEHGLIHNVIPIRSDLFR 305 Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 + + +D+IV+NPPY+++ + L E R +P + L G DGL R I + +L Sbjct: 306 DLPKVQYDLIVTNPPYVDAEDMSDLPNEYR-HEPELGLASGTDGLKLTRRILGNAADYLA 364 Query: 219 KDGLCSVEIG 228 DG+ E+G Sbjct: 365 DDGVLICEVG 374 >gi|332344114|gb|AEE57448.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific PrmB [Escherichia coli UMNK88] Length = 310 Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 44/134 (32%), Positives = 70/134 (52%), Gaps = 2/134 (1%) Query: 96 RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155 R ILD+ TG+G + +A P + VDIS AL +A+ N +G+ ++S Sbjct: 131 RQPQHILDMCTGSGCIAIACAYAFPEAEVDAVDISPDALAVAEQNIEEHGLIHNVIPIRS 190 Query: 156 DWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214 D F + + +D+IV+NPPY+++ + L E R +P + L G DGL R I + Sbjct: 191 DLFRDLPKVQYDLIVTNPPYVDAEDMSDLPNEYR-HEPELGLASGTDGLKLTRRILGNAA 249 Query: 215 RHLNKDGLCSVEIG 228 +L DG+ E+G Sbjct: 250 DYLADDGVLICEVG 263 >gi|259907873|ref|YP_002648229.1| Probable adenine-specific methylase [Erwinia pyrifoliae Ep1/96] gi|224963495|emb|CAX54983.1| Probable adenine-specific methylase [Erwinia pyrifoliae Ep1/96] Length = 292 Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 47/166 (28%), Positives = 82/166 (49%), Gaps = 6/166 (3%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ILD+ TG+G + +A P + VDIS AL + + N +G+ + ++ D F Sbjct: 117 HILDMCTGSGCIAIACAWAFPQAEVDAVDISDDALAVTEQNISAHGLEQHVTPIRCDLFR 176 Query: 160 SV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 + + +D+IV+NPPY+++ +D L E R +P + L G DGL+ R I + +L+ Sbjct: 177 ELPKTQYDLIVTNPPYVDADDMDDLPNEYR-HEPELGLAAGNDGLTLTRRILGCAAEYLS 235 Query: 219 KDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 + G+ E+G + +V + E + G D V + R Sbjct: 236 EQGVLICEVGNS----MVHLIEQYPDVPFTWLEFENGGDGVFMLTR 277 >gi|157877432|ref|XP_001687033.1| hypothetical protein [Leishmania major strain Friedlin] gi|68130108|emb|CAJ09416.1| conserved hypothetical protein [Leishmania major strain Friedlin] Length = 514 Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 47/167 (28%), Positives = 74/167 (44%), Gaps = 39/167 (23%) Query: 48 HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR----------D 97 H+ + I+G + F+ + + PRPETE+ + L R E+ Sbjct: 243 HKPLSYIIGSQPFFGCDIHCEAPLLCPRPETEMWTHWMVYRHLARAERSTPATGFSPAVS 302 Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSD 156 +RILD+ GTG + +AL K P +DI +A+ +++ NA+ NG+S ER+ +SD Sbjct: 303 PIRILDVCCGTGCIGVALAKHLPSAVVTALDILPEAVRVSRENAMRNGISPERYSARESD 362 Query: 157 WFS----------------------------SVEGLFDVIVSNPPYI 175 F + G +DVIVSNPPY+ Sbjct: 363 MFGCFLEGRVSGPPGKSANLSEDRPLGTVKDAYAGTYDVIVSNPPYV 409 >gi|332278517|ref|ZP_08390930.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Shigella sp. D9] gi|332100869|gb|EGJ04215.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Shigella sp. D9] Length = 421 Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 43/130 (33%), Positives = 69/130 (53%), Gaps = 2/130 (1%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ILD+ TG+G + +A P + VDIS AL +A+ N +G+ ++SD F Sbjct: 246 HILDMCTGSGCIAIACAYAFPEAEVDAVDISPDALAVAEQNIEEHGLIHNVIPIRSDLFR 305 Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 + + +D+IV+NPPY+++ + L E R +P + L G DGL R I + +L Sbjct: 306 DLPKVQYDLIVTNPPYVDAEDMSDLPNEYR-HEPELGLASGTDGLKLTRRILGNAADYLA 364 Query: 219 KDGLCSVEIG 228 DG+ E+G Sbjct: 365 DDGVLICEVG 374 >gi|110806296|ref|YP_689815.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Shigella flexneri 5 str. 8401] gi|110615844|gb|ABF04511.1| putative adenine-specific methylase [Shigella flexneri 5 str. 8401] gi|323944843|gb|EGB40909.1| protein-(glutamine-N5) methyltransferase [Escherichia coli H120] Length = 421 Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 43/130 (33%), Positives = 69/130 (53%), Gaps = 2/130 (1%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ILD+ TG+G + +A P + VDIS AL +A+ N +G+ ++SD F Sbjct: 246 HILDMCTGSGCIAIACAYAFPEAEVDAVDISPDALAVAEQNIEEHGLIHNVIPIRSDLFR 305 Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 + + +D+IV+NPPY+++ + L E R +P + L G DGL R I + +L Sbjct: 306 DLPKVQYDLIVTNPPYVDAEDMSDLPNEYR-HEPELGLASGTDGLKLTRRILGNAADYLA 364 Query: 219 KDGLCSVEIG 228 DG+ E+G Sbjct: 365 DDGVLICEVG 374 >gi|24113702|ref|NP_708212.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Shigella flexneri 2a str. 301] gi|30063756|ref|NP_837927.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Shigella flexneri 2a str. 2457T] gi|24052771|gb|AAN43919.1| putative adenine-specific methylase [Shigella flexneri 2a str. 301] gi|30042011|gb|AAP17737.1| putative adenine-specific methylase [Shigella flexneri 2a str. 2457T] gi|281601772|gb|ADA74756.1| putative adenine-specific methylase [Shigella flexneri 2002017] Length = 421 Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 43/130 (33%), Positives = 69/130 (53%), Gaps = 2/130 (1%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ILD+ TG+G + +A P + VDIS AL +A+ N +G+ ++SD F Sbjct: 246 HILDMCTGSGCIAIACAYAFPEAEVDAVDISPDALAVAEQNIEEHGLIHNVIPIRSDLFR 305 Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 + + +D+IV+NPPY+++ + L E R +P + L G DGL R I + +L Sbjct: 306 DLPKVQYDLIVTNPPYVDAEDMSDLPNEYR-HEPELGLASGTDGLKLTRRILGNAADYLA 364 Query: 219 KDGLCSVEIG 228 DG+ E+G Sbjct: 365 DDGVLICEVG 374 >gi|311740613|ref|ZP_07714440.1| protein-(glutamine-N5) methyltransferase [Corynebacterium pseudogenitalium ATCC 33035] gi|311304133|gb|EFQ80209.1| protein-(glutamine-N5) methyltransferase [Corynebacterium pseudogenitalium ATCC 33035] Length = 278 Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 52/190 (27%), Positives = 82/190 (43%), Gaps = 23/190 (12%) Query: 44 RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103 R E + +LG F + L + F PRPETE++ D A + D R++D Sbjct: 63 RREAREPLQYVLGSAWFGPLELKVGPGVFIPRPETEVMADWA-------VRNVDGPRLVD 115 Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVE 162 L TGTGA+ L L P + V+++ AL +N GV + D D + Sbjct: 116 LCTGTGALALYLAHYLPKAQVRAVELADAALAYTHANTHNTGVEVIQADATADDTLADWN 175 Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD------GGIDGLSHYRTIADGVSRH 216 G D++V+NPPY+ E D +P + D G DG+ + ++R Sbjct: 176 GTVDLLVTNPPYVP---------ETPDLEPEVYHDPHNAVFAGADGMGVITGLIPTIARL 226 Query: 217 LNKDGLCSVE 226 + G ++E Sbjct: 227 VRPGGKVAIE 236 >gi|26248718|ref|NP_754758.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli CFT073] gi|26109124|gb|AAN81326.1|AE016764_8 Hypothetical adenine-specific methylase yfcB [Escherichia coli CFT073] Length = 421 Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 43/130 (33%), Positives = 69/130 (53%), Gaps = 2/130 (1%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ILD+ TG+G + +A P + VDIS AL +A+ N +G+ ++SD F Sbjct: 246 HILDMCTGSGCIAIACAYAFPEAEVDAVDISPDALAVAEQNIEEHGLIHNVIPIRSDLFR 305 Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 + + +D+IV+NPPY+++ + L E R +P + L G DGL R I + +L Sbjct: 306 DLPKVQYDLIVTNPPYVDAEDMSDLPNEYRH-EPELGLASGTDGLKLTRRILGNAADYLA 364 Query: 219 KDGLCSVEIG 228 DG+ E+G Sbjct: 365 DDGVLICEVG 374 >gi|16273121|ref|NP_439357.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Haemophilus influenzae Rd KW20] gi|260581099|ref|ZP_05848920.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Haemophilus influenzae RdAW] gi|1175938|sp|P45106|Y1201_HAEIN RecName: Full=Uncharacterized adenine-specific methylase HI_1201 gi|1574130|gb|AAC22855.1| adenine specific methylase, putative [Haemophilus influenzae Rd KW20] gi|260092228|gb|EEW76170.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Haemophilus influenzae RdAW] Length = 314 Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 41/130 (31%), Positives = 71/130 (54%), Gaps = 2/130 (1%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ILDL TG+G + +A P + VD+S AL +A+ N + + R +QS+ F Sbjct: 144 HILDLCTGSGCIAIACAYAFPNAEVDAVDLSVDALNVAEINISRHQLEHRVFPIQSNLFE 203 Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 ++ G +D+IV+NPPY++ + + E F+P ++L G DGL+ + I +L Sbjct: 204 NILGQKYDLIVTNPPYVDEEDLADMPEEFH-FEPELALGSGSDGLNITKQILKQAPDYLT 262 Query: 219 KDGLCSVEIG 228 ++G+ E+G Sbjct: 263 ENGVLVCEVG 272 >gi|74312848|ref|YP_311266.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Shigella sonnei Ss046] gi|73856325|gb|AAZ89032.1| putative adenine-specific methylase [Shigella sonnei Ss046] Length = 421 Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 43/130 (33%), Positives = 69/130 (53%), Gaps = 2/130 (1%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ILD+ TG+G + +A P + VDIS AL +A+ N +G+ ++SD F Sbjct: 246 HILDMCTGSGCIAIACAYAFPEAEVDAVDISPDALAVAEQNIEEHGLIHNVIPIRSDLFR 305 Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 + + +D+IV+NPPY+++ + L E R +P + L G DGL R I + +L Sbjct: 306 DLPKVQYDLIVTNPPYVDAEDMSDLPNEYR-HEPELGLASGTDGLKLTRRILGNAADYLA 364 Query: 219 KDGLCSVEIG 228 DG+ E+G Sbjct: 365 DDGVLICEVG 374 >gi|291298830|ref|YP_003510108.1| modification methylase HemK family [Stackebrandtia nassauensis DSM 44728] gi|290568050|gb|ADD41015.1| modification methylase, HemK family [Stackebrandtia nassauensis DSM 44728] Length = 291 Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 55/188 (29%), Positives = 88/188 (46%), Gaps = 12/188 (6%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101 + R E + +LG F L + F PRPETE L + ALA R+ + Sbjct: 61 VERRAAREPLQHVLGTAPFRYAELAVGPGVFVPRPETEQLAEWALA----RLATVAAPLV 116 Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDWF 158 +DL G+GA+ A++ E P V V+ +A + N +GV+ R D + + Sbjct: 117 VDLCAGSGAIGHAIVSERPDAVVVLVEKYPEAANWLRRN--LDGVAARVVEADAVSPETL 174 Query: 159 SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 S ++G D ++SNPPY+ + + EV DP ++ GG GL R + +R L Sbjct: 175 SDLDGQCDAVLSNPPYVPTST--AVSPEVA-ADPATAVFGGSCGLDVIRPLIPRAARLLR 231 Query: 219 KDGLCSVE 226 G+ ++E Sbjct: 232 PGGVVAIE 239 >gi|322617130|gb|EFY14036.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322617565|gb|EFY14464.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322624806|gb|EFY21635.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322630356|gb|EFY27126.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322634536|gb|EFY31269.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322639247|gb|EFY35939.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322640110|gb|EFY36777.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322645672|gb|EFY42196.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322652034|gb|EFY48397.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322656207|gb|EFY52504.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322659359|gb|EFY55606.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322665819|gb|EFY62002.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322669943|gb|EFY66084.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322673928|gb|EFY70025.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322678687|gb|EFY74743.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322683519|gb|EFY79533.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322687594|gb|EFY83564.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323193572|gb|EFZ78777.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323198479|gb|EFZ83581.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323204591|gb|EFZ89594.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323208471|gb|EFZ93410.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323213607|gb|EFZ98397.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323218357|gb|EGA03067.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323219685|gb|EGA04166.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323225680|gb|EGA09906.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323232351|gb|EGA16454.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323235616|gb|EGA19700.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323241225|gb|EGA25261.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323244967|gb|EGA28969.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323250086|gb|EGA33980.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323253870|gb|EGA37695.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323255339|gb|EGA39111.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323262798|gb|EGA46349.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323264173|gb|EGA47680.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323270871|gb|EGA54309.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 310 Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 43/129 (33%), Positives = 69/129 (53%), Gaps = 2/129 (1%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 ILD+ TG+G + +A P + VDIS AL +A+ N +G+ ++SD F Sbjct: 136 ILDMCTGSGCIAIACAYAFPDSEVDAVDISPDALAVAEHNIEEHGLIHHVTPIRSDLFRD 195 Query: 161 VEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 + + +D+IV+NPPY+++ + L E R +P + L G DGL R I +L+ Sbjct: 196 LPKVQYDLIVTNPPYVDAEDMSDLPNEYR-HEPELGLASGTDGLKLTRRILGNAPDYLSD 254 Query: 220 DGLCSVEIG 228 DG+ E+G Sbjct: 255 DGVLICEVG 263 >gi|154346308|ref|XP_001569091.1| hypothetical protein [Leishmania braziliensis MHOM/BR/75/M2904] gi|134066433|emb|CAM44225.1| conserved hypothetical protein [Leishmania braziliensis MHOM/BR/75/M2904] Length = 497 Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 49/190 (25%), Positives = 81/190 (42%), Gaps = 39/190 (20%) Query: 48 HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV--------- 98 H+ + I+G + F+ + + PRPETE+ + L R E+ Sbjct: 226 HKPLSYIIGSQPFFGCDIHCEAPLLCPRPETEMWTHWMVYNHLARAERSTTATNVSSAAS 285 Query: 99 -VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV-SERFDTLQSD 156 +RILD+ GTG + +AL K +DI +A+ +++ NA NG+ ER+ ++SD Sbjct: 286 PIRILDVCCGTGCIGVALAKHLSTATVTALDILSEAVRVSRENAARNGIPPERYSAMESD 345 Query: 157 WFS----------------------------SVEGLFDVIVSNPPYIESVIVDCLGLEVR 188 FS + G +DVIVSNPPY+ L + Sbjct: 346 MFSCFLDEQASALPGERANLSDDRPMGTVKDTYAGTYDVIVSNPPYVLPKQYTDLPCTIT 405 Query: 189 DFDPRISLDG 198 ++ + +L G Sbjct: 406 HWESKTALVG 415 >gi|91211627|ref|YP_541613.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli UTI89] gi|117624520|ref|YP_853433.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli APEC O1] gi|237704811|ref|ZP_04535292.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia sp. 3_2_53FAA] gi|91073201|gb|ABE08082.1| protein-(glutamine-N5) methyltransferase [Escherichia coli UTI89] gi|115513644|gb|ABJ01719.1| protein-(glutamine-N5) methyltransferase [Escherichia coli APEC O1] gi|226901177|gb|EEH87436.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia sp. 3_2_53FAA] Length = 421 Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 43/130 (33%), Positives = 69/130 (53%), Gaps = 2/130 (1%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ILD+ TG+G + +A P + VDIS AL +A+ N +G+ ++SD F Sbjct: 246 HILDMCTGSGCIAIACAYAFPEAEVDAVDISPDALAVAEQNIEEHGLIHNVIPIRSDLFR 305 Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 + + +D+IV+NPPY+++ + L E R +P + L G DGL R I + +L Sbjct: 306 DLPKVQYDLIVTNPPYVDAEDMSDLPNEYR-HEPELGLASGTDGLKLTRRILGNAADYLA 364 Query: 219 KDGLCSVEIG 228 DG+ E+G Sbjct: 365 DDGVLICEVG 374 >gi|148828351|ref|YP_001293104.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Haemophilus influenzae PittGG] gi|148719593|gb|ABR00721.1| N5-glutamine methyltransferase [Haemophilus influenzae PittGG] Length = 314 Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 43/141 (30%), Positives = 76/141 (53%), Gaps = 3/141 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ILDL TG+G + +A P + VD+S AL +A+ N + + R +QS+ F Sbjct: 144 HILDLCTGSGCIAIACAYAFPNAEVDAVDLSVDALNVAEINISRHQLEHRVFPIQSNLFE 203 Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 ++ G +D+IV+NPPY++ + + E F+P ++L G DGL+ + I +L Sbjct: 204 NILGQKYDLIVTNPPYVDEEDLADMPEEFH-FEPELALGSGHDGLNITKQILKLAPNYLT 262 Query: 219 KDGLCSVEIGYNQKVDVVRIF 239 ++G+ E+G N V ++ + Sbjct: 263 ENGVLVCEVG-NSMVSLIEQY 282 >gi|319897333|ref|YP_004135529.1| adenine-specific methylase [Haemophilus influenzae F3031] gi|317432838|emb|CBY81203.1| conserved hypothetical adenine-specific methylase [Haemophilus influenzae F3031] Length = 314 Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 41/130 (31%), Positives = 71/130 (54%), Gaps = 2/130 (1%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ILDL TG+G + +A P + VD+S AL +A+ N + + R +QS+ F Sbjct: 144 HILDLCTGSGCIAIACAYAFPNAEVDAVDLSVDALNVAEINISRHQLEHRVFPIQSNLFE 203 Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 ++ G +D+IV+NPPY++ + + E F+P ++L G DGL+ + I +L Sbjct: 204 NILGQKYDLIVTNPPYVDEEDLADMPEEFH-FEPELALGSGSDGLNITKQILKQAPDYLT 262 Query: 219 KDGLCSVEIG 228 ++G+ E+G Sbjct: 263 ENGVLVCEVG 272 >gi|227548001|ref|ZP_03978050.1| possible site-specific DNA-methyltransferase (adenine-specific) [Corynebacterium lipophiloflavum DSM 44291] gi|227079907|gb|EEI17870.1| possible site-specific DNA-methyltransferase (adenine-specific) [Corynebacterium lipophiloflavum DSM 44291] Length = 283 Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 61/224 (27%), Positives = 95/224 (42%), Gaps = 11/224 (4%) Query: 39 TNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV 98 T A+ R E + I G F + L + F PRPETE+L D +++ ++ Sbjct: 58 TQALRRRAACEPLQHITGCAPFGPLELAVGPGVFIPRPETEVLAD----WAVRKLTGVAS 113 Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQS 155 ++DLGTG+GA+ + + + V+ S A A+ NA GV D Sbjct: 114 PVVVDLGTGSGALAIYIAHALDDARVTAVEASATARRYARGNAERLGVDVTVIAGDMTDP 173 Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215 + G D++VSNPPY+ + +G EV DP ++ G DG+ R + +R Sbjct: 174 QLLDQMRGQVDLVVSNPPYVP--LGQDVGAEVL-HDPDEAVFSGADGMDAIRGLVPVAAR 230 Query: 216 HLNKDGLCSVEIGYNQKVDVVRIFESRKLFL-VNAFKDYGGNDR 258 L G +E V + + F V A +D G R Sbjct: 231 LLAPGGALGIEHDDTTSQKVQEVVAAHGQFSDVQAREDLTGRAR 274 >gi|256822180|ref|YP_003146143.1| HemK family modification methylase [Kangiella koreensis DSM 16069] gi|256795719|gb|ACV26375.1| modification methylase, HemK family [Kangiella koreensis DSM 16069] Length = 304 Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 49/135 (36%), Positives = 72/135 (53%), Gaps = 2/135 (1%) Query: 95 KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154 + D RILDL G+G + LA+ + V DIS A+ +A N G+ + T+ Sbjct: 131 EADNPRILDLCCGSGCIGLAIAAYIDDAEVVLSDISDDAITVADINNERLGLYPKAQTVV 190 Query: 155 SDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213 SD F S+ + FD+IVSNPPY++S + + E + +P I L G DGL R I + Sbjct: 191 SDLFESLSDEKFDLIVSNPPYVDSEDLSDMPAEYQ-HEPEIGLGSGEDGLDITRRILEQA 249 Query: 214 SRHLNKDGLCSVEIG 228 + HL + G VE+G Sbjct: 250 AEHLTEQGCLIVEVG 264 >gi|329124068|ref|ZP_08252615.1| protein-(glutamine-N5) methyltransferase [Haemophilus aegyptius ATCC 11116] gi|327467493|gb|EGF12991.1| protein-(glutamine-N5) methyltransferase [Haemophilus aegyptius ATCC 11116] Length = 314 Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 41/130 (31%), Positives = 71/130 (54%), Gaps = 2/130 (1%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ILDL TG+G + +A P + VD+S AL +A+ N + + R +QS+ F Sbjct: 144 HILDLCTGSGCIAIACAYAFPNAEVDAVDLSVDALNVAEINISRHQLEHRVFPIQSNLFE 203 Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 ++ G +D+IV+NPPY++ + + E F+P ++L G DGL+ + I +L Sbjct: 204 NILGQKYDLIVTNPPYVDEEDLADMPEEFH-FEPELALGSGSDGLNITKQILKQAPDYLT 262 Query: 219 KDGLCSVEIG 228 ++G+ E+G Sbjct: 263 ENGVLVCEVG 272 >gi|296104016|ref|YP_003614162.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295058475|gb|ADF63213.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 310 Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 46/146 (31%), Positives = 73/146 (50%), Gaps = 3/146 (2%) Query: 95 KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154 R ILD+ TG+G + +A P + VDIS AL + + N +G+ ++ Sbjct: 130 NRQPQHILDMCTGSGCIAIACAYAFPEAEVDAVDISTDALAVTEHNIEEHGLIHHVTPIR 189 Query: 155 SDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213 SD F + L +D+IV+NPPY+++ + L E R +P + L G DGL R I Sbjct: 190 SDLFRDLPTLQYDLIVTNPPYVDAEDMSDLPNEYR-HEPELGLASGSDGLKLTRRILACA 248 Query: 214 SRHLNKDGLCSVEIGYNQKVDVVRIF 239 +L DG+ E+G N V ++ + Sbjct: 249 PDYLTDDGVLICEVG-NSMVHLIEQY 273 >gi|330723257|gb|AEC45627.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Mycoplasma hyorhinis MCLD] Length = 243 Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 56/180 (31%), Positives = 88/180 (48%), Gaps = 14/180 (7%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110 I +I+G+ N++L ++ PR ETE L+ A + I + V LDLG G+G Sbjct: 42 IQKIIGFVCMQNLQLKINKKVLIPRYETEELILQAYKY----INGQSTV--LDLGCGSGF 95 Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIV 169 + LA+ K + + V DI +A+ +K NA N + + +QSD F +++ FDVI+ Sbjct: 96 IGLAIAKNTKAKQVVLSDIDSQAILQSKINAKLNKL--KVKIIQSDLFDNLKKYKFDVII 153 Query: 170 SNPPYI--ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227 NPPY+ E +D V D++P +L G Y+ I L G+ EI Sbjct: 154 CNPPYLDFEKSKLDS---SVLDYEPWNALFAKQKGNYFYQKILKQYKSFLKPKGVILFEI 210 >gi|260582130|ref|ZP_05849924.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Haemophilus influenzae NT127] gi|260094762|gb|EEW78656.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Haemophilus influenzae NT127] Length = 314 Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 41/130 (31%), Positives = 71/130 (54%), Gaps = 2/130 (1%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ILDL TG+G + +A P + VD+S AL +A+ N + + R +QS+ F Sbjct: 144 HILDLCTGSGCIAIACAYAFPNAEVDAVDLSVDALNVAEINISRHQLEHRVFPIQSNLFE 203 Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 ++ G +D+IV+NPPY++ + + E F+P ++L G DGL+ + I +L Sbjct: 204 NILGQKYDLIVTNPPYVDEEDLADMPEEFH-FEPELALGSGHDGLNITKQILKQAPDYLT 262 Query: 219 KDGLCSVEIG 228 ++G+ E+G Sbjct: 263 ENGVLVCEVG 272 >gi|261855214|ref|YP_003262497.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Halothiobacillus neapolitanus c2] gi|261835683|gb|ACX95450.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Halothiobacillus neapolitanus c2] Length = 326 Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 43/139 (30%), Positives = 70/139 (50%), Gaps = 7/139 (5%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 ILD+GTG+G + +AL + P DIS AL IA N + +R + QSD + Sbjct: 154 ILDIGTGSGCLAIALAQYFPEAMISACDISMDALSIAARNVRDYQLEDRVELYQSDLLDN 213 Query: 161 VEG------LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214 ++ FD+I+SNPPY++ + + E +P ++L GL+ + D Sbjct: 214 LKDETDAPLRFDLIISNPPYVDPAEAEDMPEEYH-HEPAMALYAPNQGLALVERMLDTAG 272 Query: 215 RHLNKDGLCSVEIGYNQKV 233 HL+ DG VE+G +++ Sbjct: 273 EHLSPDGYLFVEVGNGRRL 291 >gi|33152710|ref|NP_874063.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Haemophilus ducreyi 35000HP] gi|33148934|gb|AAP96452.1| putative adenine-specific methylase [Haemophilus ducreyi 35000HP] Length = 314 Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 41/143 (28%), Positives = 80/143 (55%), Gaps = 3/143 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 RILDL TG+G + +A + P + VD+S AL++A+ N + V+ + + S+ FS Sbjct: 143 RILDLCTGSGCIAIACAQRFPNAEIDAVDLSIDALDVAQINIERHQVAHQVFPISSNLFS 202 Query: 160 SV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 + + +D+IV+NPPY++ ++ + E + +P+++L G+DGL + +L Sbjct: 203 DIPQDKYDLIVTNPPYVDEEDLNEMPYEFQ-HEPKLALGSGVDGLDITKQTLAKAPDYLT 261 Query: 219 KDGLCSVEIGYNQKVDVVRIFES 241 +G+ E+G N + ++ F + Sbjct: 262 DNGVLVCEVG-NSMLHLIEQFPA 283 >gi|293415624|ref|ZP_06658267.1| adenine-specific DNA-methyltransferase [Escherichia coli B185] gi|291433272|gb|EFF06251.1| adenine-specific DNA-methyltransferase [Escherichia coli B185] Length = 421 Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 43/130 (33%), Positives = 69/130 (53%), Gaps = 2/130 (1%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ILD+ TG+G + +A P + VDIS AL +A+ N +G+ ++SD F Sbjct: 246 HILDMCTGSGCIAIACAYAFPDAEVDAVDISPDALAVAEQNIEEHGLIHNVIPIRSDLFR 305 Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 + + +D+IV+NPPY+++ + L E R +P + L G DGL R I + +L Sbjct: 306 DLPKVQYDLIVTNPPYVDAEDMSDLPNEYR-HEPELGLASGTDGLKLTRRILGNAADYLA 364 Query: 219 KDGLCSVEIG 228 DG+ E+G Sbjct: 365 DDGVLICEVG 374 >gi|145641198|ref|ZP_01796778.1| N5-glutamine methyltransferase [Haemophilus influenzae R3021] gi|145274035|gb|EDK13901.1| N5-glutamine methyltransferase [Haemophilus influenzae 22.4-21] Length = 314 Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 41/130 (31%), Positives = 71/130 (54%), Gaps = 2/130 (1%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ILDL TG+G + +A P + VD+S AL +A+ N + + R +QS+ F Sbjct: 144 HILDLCTGSGCIAIACAYAFPNAEVDAVDLSVDALNVAEINISRHQLEHRVFPIQSNLFE 203 Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 ++ G +D+IV+NPPY++ + + E F+P ++L G DGL+ + I +L Sbjct: 204 NILGQKYDLIVTNPPYVDEEDLADMPEEFH-FEPELALGSGHDGLNITKQILKQAPDYLT 262 Query: 219 KDGLCSVEIG 228 ++G+ E+G Sbjct: 263 ENGVLVCEVG 272 >gi|145639279|ref|ZP_01794885.1| N5-glutamine methyltransferase [Haemophilus influenzae PittII] gi|145271582|gb|EDK11493.1| N5-glutamine methyltransferase [Haemophilus influenzae PittII] gi|309751156|gb|ADO81140.1| 50S subunit L3 protein glutamine methyltransferase [Haemophilus influenzae R2866] Length = 314 Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 41/130 (31%), Positives = 71/130 (54%), Gaps = 2/130 (1%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ILDL TG+G + +A P + VD+S AL +A+ N + + R +QS+ F Sbjct: 144 HILDLCTGSGCIAIACAYAFPNAEVDAVDLSVDALNVAEINISRHQLEHRVFPIQSNLFE 203 Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 ++ G +D+IV+NPPY++ + + E F+P ++L G DGL+ + I +L Sbjct: 204 NILGQKYDLIVTNPPYVDEEDLADMPEEFH-FEPELALGSGSDGLNITKQILKQAPDYLT 262 Query: 219 KDGLCSVEIG 228 ++G+ E+G Sbjct: 263 ENGVLVCEVG 272 >gi|82544812|ref|YP_408758.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Shigella boydii Sb227] gi|81246223|gb|ABB66931.1| putative adenine-specific methylase [Shigella boydii Sb227] Length = 421 Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 43/130 (33%), Positives = 69/130 (53%), Gaps = 2/130 (1%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ILD+ TG+G + +A P + VDIS AL +A+ N +G+ ++SD F Sbjct: 246 HILDMCTGSGCIAIACAYAFPDAEVDAVDISPDALAVAEQNIEEHGLIHNVIPIRSDLFR 305 Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 + + +D+IV+NPPY+++ + L E R +P + L G DGL R I + +L Sbjct: 306 DLPKVQYDLIVTNPPYVDAEDMSDLPNEYR-HEPELGLASGTDGLKLTRRILGNAADYLA 364 Query: 219 KDGLCSVEIG 228 DG+ E+G Sbjct: 365 DDGVLICEVG 374 >gi|331695520|ref|YP_004331759.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Pseudonocardia dioxanivorans CB1190] gi|326950209|gb|AEA23906.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Pseudonocardia dioxanivorans CB1190] Length = 291 Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 74/255 (29%), Positives = 106/255 (41%), Gaps = 19/255 (7%) Query: 17 LSSHQVIVD----PDSVLDDRQRFFLTNAIV-RSLKHESIHRILGWRDFYNVRLTLSSDT 71 L++H V VD P L DR +V R E + +LG V + + Sbjct: 32 LAAHVVGVDRGRLPMVPLVDRDVVETYRVLVSRRAAREPLQHVLGTAVLGPVEVAVGPGV 91 Query: 72 FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131 F PRPETELL++ LA RI ++DL TG+GA+ LA+ P + V+ Sbjct: 92 FTPRPETELLLEWGLA----RIADVAHPLVVDLCTGSGALALAIAAARPDAQVHAVEADP 147 Query: 132 KALEIAKSN-------AVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184 AL A+ N T D +D +E D++V NPPY+ + Sbjct: 148 GALVWAQRNIAAQAAAGATPVTLHAADVRWTDLLVELEAKVDLVVCNPPYVPDGT--PVP 205 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 EV D+DP ++ GG DGL R + + L G ++E Q + RK+ Sbjct: 206 PEVADWDPPGAVFGGPDGLEIVRAVVSTAAGLLRHGGWLAIEHDDTQGESAPGLLARRKV 265 Query: 245 FL-VNAFKDYGGNDR 258 F V D G R Sbjct: 266 FSDVADHADLAGRPR 280 >gi|145633068|ref|ZP_01788800.1| N5-glutamine methyltransferase [Haemophilus influenzae 3655] gi|144986294|gb|EDJ92873.1| N5-glutamine methyltransferase [Haemophilus influenzae 3655] Length = 314 Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 43/141 (30%), Positives = 76/141 (53%), Gaps = 3/141 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ILDL TG+G + +A P + VD+S AL +A+ N + + R +QS+ F Sbjct: 144 HILDLCTGSGCIAIACAYAFPNAEVDAVDLSVDALNVAEINISRHQLEHRVFPIQSNLFE 203 Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 ++ G +D+IV+NPPY++ + + E F+P ++L G DGL+ + I +L Sbjct: 204 NILGQKYDLIVTNPPYVDEEDLADMPEEFH-FEPELALGSGHDGLNITKQILKLAPNYLT 262 Query: 219 KDGLCSVEIGYNQKVDVVRIF 239 ++G+ E+G N V ++ + Sbjct: 263 ENGVLVCEVG-NSMVSLIEQY 282 >gi|323936620|gb|EGB32907.1| protein-(glutamine-N5) methyltransferase [Escherichia coli E1520] gi|323940973|gb|EGB37160.1| protein-(glutamine-N5) methyltransferase [Escherichia coli E482] Length = 421 Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 43/130 (33%), Positives = 69/130 (53%), Gaps = 2/130 (1%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ILD+ TG+G + +A P + VDIS AL +A+ N +G+ ++SD F Sbjct: 246 HILDMCTGSGCIAIACAYAFPDAEVDAVDISPDALAVAEQNIEEHGLIHNVIPIRSDLFR 305 Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 + + +D+IV+NPPY+++ + L E R +P + L G DGL R I + +L Sbjct: 306 DLPKVQYDLIVTNPPYVDAEDMSDLPNEYR-HEPELGLASGTDGLKLTRRILGNAADYLA 364 Query: 219 KDGLCSVEIG 228 DG+ E+G Sbjct: 365 DDGVLICEVG 374 >gi|68249747|ref|YP_248859.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Haemophilus influenzae 86-028NP] gi|68057946|gb|AAX88199.1| conserved hypothetical adenine-specific methylase [Haemophilus influenzae 86-028NP] Length = 314 Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 41/130 (31%), Positives = 71/130 (54%), Gaps = 2/130 (1%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ILDL TG+G + +A P + VD+S AL +A+ N + + R +QS+ F Sbjct: 144 HILDLCTGSGCIAIACAYAFPNAEVDAVDLSVDALNVAEINISRHQLEHRVFPIQSNLFE 203 Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 ++ G +D+IV+NPPY++ + + E F+P ++L G DGL+ + I +L Sbjct: 204 NILGQKYDLIVTNPPYVDEEDLADMPEEFH-FEPELALGSGSDGLNITKQILKQAPDYLT 262 Query: 219 KDGLCSVEIG 228 ++G+ E+G Sbjct: 263 ENGVLVCEVG 272 >gi|148826190|ref|YP_001290943.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Haemophilus influenzae PittEE] gi|148716350|gb|ABQ98560.1| N5-glutamine methyltransferase [Haemophilus influenzae PittEE] Length = 314 Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 41/130 (31%), Positives = 71/130 (54%), Gaps = 2/130 (1%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ILDL TG+G + +A P + VD+S AL +A+ N + + R +QS+ F Sbjct: 144 HILDLCTGSGCIAIACAYAFPNAEVDAVDLSVDALNVAEINISRHQLEHRVFPIQSNLFE 203 Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 ++ G +D+IV+NPPY++ + + E F+P ++L G DGL+ + I +L Sbjct: 204 NILGQKYDLIVTNPPYVDEEDLADMPEEFH-FEPELALGSGNDGLNITKQILKQAPDYLT 262 Query: 219 KDGLCSVEIG 228 ++G+ E+G Sbjct: 263 ENGVLVCEVG 272 >gi|15802877|ref|NP_288904.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli O157:H7 EDL933] gi|12516692|gb|AAG57459.1|AE005464_10 putative adenine-specific methylase [Escherichia coli O157:H7 str. EDL933] Length = 421 Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 43/130 (33%), Positives = 69/130 (53%), Gaps = 2/130 (1%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ILD+ TG+G + +A P + VDIS AL +A+ N +G+ ++SD F Sbjct: 246 HILDMCTGSGCIAIACAYAFPEAEVDAVDISPDALAVAEQNIEEHGLIHNVIPIRSDLFR 305 Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 + + +D+IV+NPPY+++ + L E R +P + L G DGL R I + +L Sbjct: 306 DLPKVQYDLIVTNPPYVDAEDMSDLPNEYR-HEPELGLASGTDGLKLTRRILGNAADYLA 364 Query: 219 KDGLCSVEIG 228 DG+ E+G Sbjct: 365 DDGVLICEVG 374 >gi|291283571|ref|YP_003500389.1| putative adenine-specific methylase [Escherichia coli O55:H7 str. CB9615] gi|13362684|dbj|BAB36637.1| putative adenine-specific methylase [Escherichia coli O157:H7 str. Sakai] gi|209764668|gb|ACI80646.1| putative adenine-specific methylase [Escherichia coli] gi|209764670|gb|ACI80647.1| putative adenine-specific methylase [Escherichia coli] gi|209764672|gb|ACI80648.1| putative adenine-specific methylase [Escherichia coli] gi|209764674|gb|ACI80649.1| putative adenine-specific methylase [Escherichia coli] gi|209764676|gb|ACI80650.1| putative adenine-specific methylase [Escherichia coli] gi|290763445|gb|ADD57406.1| Putative adenine-specific methylase [Escherichia coli O55:H7 str. CB9615] Length = 421 Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 43/130 (33%), Positives = 69/130 (53%), Gaps = 2/130 (1%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ILD+ TG+G + +A P + VDIS AL +A+ N +G+ ++SD F Sbjct: 246 HILDMCTGSGCIAIACAYAFPEAEVDAVDISPDALAVAEQNIEEHGLIHNVIPIRSDLFR 305 Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 + + +D+IV+NPPY+++ + L E R +P + L G DGL R I + +L Sbjct: 306 DLPKVQYDLIVTNPPYVDAEDMSDLPNEYR-HEPELGLASGTDGLKLTRRILGNAADYLA 364 Query: 219 KDGLCSVEIG 228 DG+ E+G Sbjct: 365 DDGVLICEVG 374 >gi|289425387|ref|ZP_06427164.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Propionibacterium acnes SK187] gi|289154365|gb|EFD03053.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Propionibacterium acnes SK187] Length = 291 Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 67/256 (26%), Positives = 109/256 (42%), Gaps = 9/256 (3%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ LC + Q+I D RF + R E I+G F +RL Sbjct: 28 DARMLLCEALRIQPSQLIRVASVNAADEDRF--NQMVDRRRSGEPAQYIIGHAWFRGLRL 85 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 + F PR ETEL+ + ++ + + ++DL TGTGA+ LA+ E P + Sbjct: 86 EVGPGVFIPRLETELVAEQSIQEARRLVMSGACPSVIDLCTGTGAIALAVASEVPGSRVS 145 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCL 183 V++ AL + N +GV + L D + FDV+V+NPPY+ V + Sbjct: 146 AVEVDDAALTWTRRNLCDSGV----EVLAGDALRVPDDGRRFDVVVTNPPYLRRSDVSSI 201 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 EV + +P ++L G DGL + + L GL +E Q+ ++V + Sbjct: 202 PGEVTEHEPDLALFSGDDGLDLPLLLIGRAAELLTPGGLFVMEHDETQREELVAAMATSD 261 Query: 244 LF-LVNAFKDYGGNDR 258 ++ + D G R Sbjct: 262 MWEQIEDHDDLAGRPR 277 >gi|319943844|ref|ZP_08018125.1| protein-(glutamine-N5) methyltransferase [Lautropia mirabilis ATCC 51599] gi|319743077|gb|EFV95483.1| protein-(glutamine-N5) methyltransferase [Lautropia mirabilis ATCC 51599] Length = 355 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 49/164 (29%), Positives = 81/164 (49%), Gaps = 8/164 (4%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+LDL TG G++ + P + V DIS AL++A N G+ R +Q D F Sbjct: 182 RVLDLCTGGGSLAIIAAHYLPDSEVVASDISADALQLAAENIADYGLENRIRLVQGDLFQ 241 Query: 160 SVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 +++G F +I+ NPPY+ + + L E R +P +L G DG+ + HL Sbjct: 242 NLQGESFKLILCNPPYVNAESMAALPSEYR-AEPEKALGSGPDGMDLITRLLHEAPEHLW 300 Query: 219 KDGLCSVEIGYNQKVDVVRIFESRKLFLV-NAFKDYGGNDRVLL 261 G+ ++EIG+ + F++R L + G+DR++L Sbjct: 301 PCGVLALEIGHE-----MPNFQARFPTLTWTSIPVAQGDDRIVL 339 >gi|229844844|ref|ZP_04464982.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Haemophilus influenzae 6P18H1] gi|229812225|gb|EEP47916.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Haemophilus influenzae 6P18H1] Length = 314 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 41/130 (31%), Positives = 71/130 (54%), Gaps = 2/130 (1%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ILDL TG+G + +A P + VD+S AL +A+ N + + R +QS+ F Sbjct: 144 HILDLCTGSGCIAIACAYAFPNAEVDAVDLSVDALNVAEINISRHQLEHRVFPIQSNLFE 203 Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 ++ G +D+IV+NPPY++ + + E F+P ++L G DGL+ + I +L Sbjct: 204 NILGQKYDLIVTNPPYVDEEDLADMPEEFH-FEPELALGSGSDGLNITKQILKLAPNYLT 262 Query: 219 KDGLCSVEIG 228 ++G+ E+G Sbjct: 263 ENGVLVCEVG 272 >gi|329297421|ref|ZP_08254757.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Plautia stali symbiont] Length = 310 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 42/130 (32%), Positives = 71/130 (54%), Gaps = 2/130 (1%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ILD+ TG+G + +A P + VDIS AL +A+ N +G+ +++D F Sbjct: 135 HILDMCTGSGCIAIACAYVFPEAEVDAVDISTDALAVAEQNIEEHGLLHHVTPIRADLFR 194 Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 ++ + +D+IV+NPPY+++ +D L E R +P + L G DGL R I +L+ Sbjct: 195 NLPQVKYDLIVTNPPYVDAEDMDDLPNEYR-HEPELGLAAGSDGLKLVRRILACAPDYLS 253 Query: 219 KDGLCSVEIG 228 + G+ E+G Sbjct: 254 EQGVLICEVG 263 >gi|157144728|ref|YP_001452047.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Citrobacter koseri ATCC BAA-895] gi|157081933|gb|ABV11611.1| hypothetical protein CKO_00455 [Citrobacter koseri ATCC BAA-895] Length = 310 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 44/141 (31%), Positives = 73/141 (51%), Gaps = 3/141 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ILD+ TG+G + +A P + VDIS AL + + N +G+ ++SD F Sbjct: 135 HILDMCTGSGCIAIACAYAFPEAEVDAVDISSDALAVTEHNIEEHGLLNHVTPIRSDLFR 194 Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 + + +D+IV+NPPY+++ + L E R +P + L G DGL R I +L+ Sbjct: 195 DLPKVQYDLIVTNPPYVDAEDMSDLPNEYR-HEPELGLASGTDGLKLTRRILGNAPDYLS 253 Query: 219 KDGLCSVEIGYNQKVDVVRIF 239 DG+ E+G N V ++ + Sbjct: 254 DDGILICEVG-NSMVHLIEQY 273 >gi|38704076|ref|NP_311241.2| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli O157:H7 str. Sakai] gi|168748186|ref|ZP_02773208.1| ribosomal large subunit L3 protein glutamine methyltransferase [Escherichia coli O157:H7 str. EC4113] gi|168755089|ref|ZP_02780096.1| ribosomal large subunit L3 protein glutamine methyltransferase [Escherichia coli O157:H7 str. EC4401] gi|168761225|ref|ZP_02786232.1| ribosomal large subunit L3 protein glutamine methyltransferase [Escherichia coli O157:H7 str. EC4501] gi|168767963|ref|ZP_02792970.1| ribosomal large subunit L3 protein glutamine methyltransferase [Escherichia coli O157:H7 str. EC4486] gi|168772937|ref|ZP_02797944.1| ribosomal large subunit L3 protein glutamine methyltransferase [Escherichia coli O157:H7 str. EC4196] gi|168780193|ref|ZP_02805200.1| ribosomal large subunit L3 protein glutamine methyltransferase [Escherichia coli O157:H7 str. EC4076] gi|168787244|ref|ZP_02812251.1| ribosomal large subunit L3 protein glutamine methyltransferase [Escherichia coli O157:H7 str. EC869] gi|168798507|ref|ZP_02823514.1| ribosomal large subunit L3 protein glutamine methyltransferase [Escherichia coli O157:H7 str. EC508] gi|195935710|ref|ZP_03081092.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli O157:H7 str. EC4024] gi|208809728|ref|ZP_03252065.1| ribosomal large subunit L3 protein glutamine methyltransferase [Escherichia coli O157:H7 str. EC4206] gi|208814004|ref|ZP_03255333.1| ribosomal large subunit L3 protein glutamine methyltransferase [Escherichia coli O157:H7 str. EC4045] gi|208821799|ref|ZP_03262119.1| ribosomal large subunit L3 protein glutamine methyltransferase [Escherichia coli O157:H7 str. EC4042] gi|209400438|ref|YP_002271740.1| ribosomal large subunit L3 protein glutamine methyltransferase [Escherichia coli O157:H7 str. EC4115] gi|217327637|ref|ZP_03443720.1| ribosomal large subunit L3 protein glutamine methyltransferase [Escherichia coli O157:H7 str. TW14588] gi|254794223|ref|YP_003079060.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli O157:H7 str. TW14359] gi|261223215|ref|ZP_05937496.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli O157:H7 str. FRIK2000] gi|261259235|ref|ZP_05951768.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli O157:H7 str. FRIK966] gi|187771349|gb|EDU35193.1| ribosomal large subunit L3 protein glutamine methyltransferase [Escherichia coli O157:H7 str. EC4196] gi|188017230|gb|EDU55352.1| ribosomal large subunit L3 protein glutamine methyltransferase [Escherichia coli O157:H7 str. EC4113] gi|189002135|gb|EDU71121.1| ribosomal large subunit L3 protein glutamine methyltransferase [Escherichia coli O157:H7 str. EC4076] gi|189357616|gb|EDU76035.1| ribosomal large subunit L3 protein glutamine methyltransferase [Escherichia coli O157:H7 str. EC4401] gi|189363009|gb|EDU81428.1| ribosomal large subunit L3 protein glutamine methyltransferase [Escherichia coli O157:H7 str. EC4486] gi|189368252|gb|EDU86668.1| ribosomal large subunit L3 protein glutamine methyltransferase [Escherichia coli O157:H7 str. EC4501] gi|189372815|gb|EDU91231.1| ribosomal large subunit L3 protein glutamine methyltransferase [Escherichia coli O157:H7 str. EC869] gi|189378909|gb|EDU97325.1| ribosomal large subunit L3 protein glutamine methyltransferase [Escherichia coli O157:H7 str. EC508] gi|208729529|gb|EDZ79130.1| ribosomal large subunit L3 protein glutamine methyltransferase [Escherichia coli O157:H7 str. EC4206] gi|208735281|gb|EDZ83968.1| ribosomal large subunit L3 protein glutamine methyltransferase [Escherichia coli O157:H7 str. EC4045] gi|208741922|gb|EDZ89604.1| ribosomal large subunit L3 protein glutamine methyltransferase [Escherichia coli O157:H7 str. EC4042] gi|209161838|gb|ACI39271.1| ribosomal large subunit L3 protein glutamine methyltransferase [Escherichia coli O157:H7 str. EC4115] gi|217320004|gb|EEC28429.1| ribosomal large subunit L3 protein glutamine methyltransferase [Escherichia coli O157:H7 str. TW14588] gi|254593623|gb|ACT72984.1| ribosomal protein L3 N5-glutamine methyltransferase [Escherichia coli O157:H7 str. TW14359] gi|320192045|gb|EFW66690.1| Ribosomal protein L3 methyltransferase [Escherichia coli O157:H7 str. EC1212] gi|320641158|gb|EFX10637.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli O157:H7 str. G5101] gi|320646374|gb|EFX15297.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli O157:H- str. 493-89] gi|320651644|gb|EFX20024.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli O157:H- str. H 2687] gi|320657395|gb|EFX25197.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320662930|gb|EFX30254.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli O55:H7 str. USDA 5905] gi|320667674|gb|EFX34585.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli O157:H7 str. LSU-61] gi|326339683|gb|EGD63494.1| Ribosomal protein L3 methyltransferase [Escherichia coli O157:H7 str. 1125] gi|326344145|gb|EGD67906.1| Ribosomal protein L3 methyltransferase [Escherichia coli O157:H7 str. 1044] Length = 310 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 43/130 (33%), Positives = 69/130 (53%), Gaps = 2/130 (1%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ILD+ TG+G + +A P + VDIS AL +A+ N +G+ ++SD F Sbjct: 135 HILDMCTGSGCIAIACAYAFPEAEVDAVDISPDALAVAEQNIEEHGLIHNVIPIRSDLFR 194 Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 + + +D+IV+NPPY+++ + L E R +P + L G DGL R I + +L Sbjct: 195 DLPKVQYDLIVTNPPYVDAEDMSDLPNEYR-HEPELGLASGTDGLKLTRRILGNAADYLA 253 Query: 219 KDGLCSVEIG 228 DG+ E+G Sbjct: 254 DDGVLICEVG 263 >gi|312173062|emb|CBX81317.1| putative adenine-specific methylase [Erwinia amylovora ATCC BAA-2158] Length = 310 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 49/166 (29%), Positives = 85/166 (51%), Gaps = 6/166 (3%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ILD+ TG+G + +A P + VDIS AL + + N +G+ + ++ D F Sbjct: 135 HILDMCTGSGCIAIACAWAFPQAEVDAVDISGDALAVTEQNISAHGLEQHVTPIRCDLFR 194 Query: 160 SV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 + + +D+IV+NPPY+++ +D L E R +P + L G DGL+ R I + +L+ Sbjct: 195 ELPKTQYDLIVTNPPYVDADDMDDLPSEYR-HEPELGLAAGNDGLTLARRILGCAADYLS 253 Query: 219 KDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 + G+ E+G N V ++ + F F++ G D V + R Sbjct: 254 EQGVLICEVG-NSMVHLINQYPDVP-FTWLEFEN--GGDGVFMLTR 295 >gi|222034086|emb|CAP76827.1| Uncharacterized adenine-specific methylase yfcB [Escherichia coli LF82] gi|312946949|gb|ADR27776.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli O83:H1 str. NRG 857C] Length = 310 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 43/130 (33%), Positives = 69/130 (53%), Gaps = 2/130 (1%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ILD+ TG+G + +A P + VDIS AL +A+ N +G+ ++SD F Sbjct: 135 HILDMCTGSGCIAIACAYAFPEAEVDAVDISPDALAVAEQNIEEHGLIHNVIPIRSDLFR 194 Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 + + +D+IV+NPPY+++ + L E R +P + L G DGL R I + +L Sbjct: 195 DLPKVQYDLIVTNPPYVDAEDMSDLPNEYR-HEPELGLASGTDGLKLTRRILGNAADYLA 253 Query: 219 KDGLCSVEIG 228 DG+ E+G Sbjct: 254 DDGVLICEVG 263 >gi|256384223|gb|ACU78793.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Mycoplasma mycoides subsp. capri str. GM12] gi|256385055|gb|ACU79624.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Mycoplasma mycoides subsp. capri str. GM12] gi|296455251|gb|ADH21486.1| protein-(glutamine-N5) methyltransferase, release factor-specific [synthetic Mycoplasma mycoides JCVI-syn1.0] Length = 282 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 64/242 (26%), Positives = 112/242 (46%), Gaps = 31/242 (12%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D + L + +I + D L +Q + + + ++ + IL + FY+ Sbjct: 23 DVYHILEHIINKDYQWIISNLDYKLTKKQIYKIDQILDLLKQNYPLAYILKSKYFYSNNF 82 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG--AVCLALLKESPFFK 123 ++ D PR E+EL++D A F ++ + + I+DL TG+G + ALL + K Sbjct: 83 FINKDVLIPRNESELIIDHASEF----VKNNNDLLIVDLCTGSGCLGISCALLNDQN--K 136 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF-----------DVIVSNP 172 + DIS KAL++A N ++F+ + S + G F ++I+ NP Sbjct: 137 VILTDISYKALKVANKNI------KKFNLTNT---SCLNGNFIDVLIKNNLKANLIICNP 187 Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL--NKDGLCSVEIGYN 230 PYI+ + + V DF+P I+L GL Y + + + L NK+ L +E G+ Sbjct: 188 PYID-INDQNIDKNVIDFEPSIALFAPNKGLYFYEILIKNIDKILDTNKNFLIVLEFGWL 246 Query: 231 QK 232 QK Sbjct: 247 QK 248 >gi|269139791|ref|YP_003296492.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Edwardsiella tarda EIB202] gi|267985452|gb|ACY85281.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Edwardsiella tarda EIB202] gi|304559657|gb|ADM42321.1| Ribosomal protein L3 methyltransferase [Edwardsiella tarda FL6-60] Length = 310 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 51/166 (30%), Positives = 83/166 (50%), Gaps = 6/166 (3%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ILD+ TG+G + +A P + VDIS L + + N +G+ ++ ++SD F Sbjct: 135 HILDMCTGSGCIAIACAYAFPQAEVDAVDISSDVLAVTEHNIQQHGLEQQVTPIRSDLFR 194 Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 + L +D+IV+NPPY++ + L E R +P + L G DGL R I +L+ Sbjct: 195 ELPPLRYDLIVTNPPYVDEEDMSDLPDEFR-HEPTLGLAAGSDGLKLVRRILACAPDYLS 253 Query: 219 KDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 DG+ E+G N V ++ + S F+ F + G D V + R Sbjct: 254 DDGVLICEVG-NSMVHLMAQYPSIP-FVWLEFDN--GGDGVFMLTR 295 >gi|170019361|ref|YP_001724315.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli ATCC 8739] gi|169754289|gb|ACA76988.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Escherichia coli ATCC 8739] Length = 310 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 43/130 (33%), Positives = 69/130 (53%), Gaps = 2/130 (1%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ILD+ TG+G + +A P + VDIS AL +A+ N +G+ ++SD F Sbjct: 135 HILDMCTGSGCIAIACAYAFPEAEVDAVDISPDALAVAEQNIEEHGLIHNVIPIRSDLFR 194 Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 + + +D+IV+NPPY+++ + L E R +P + L G DGL R I + +L Sbjct: 195 DLPKVQYDLIVTNPPYVDAEDMSDLPNEYR-HEPELGLASGTDGLKLTRRILGNAADYLA 253 Query: 219 KDGLCSVEIG 228 DG+ E+G Sbjct: 254 DDGVLICEVG 263 >gi|238788717|ref|ZP_04632509.1| Uncharacterized adenine-specific methylase [Yersinia frederiksenii ATCC 33641] gi|238723312|gb|EEQ14960.1| Uncharacterized adenine-specific methylase [Yersinia frederiksenii ATCC 33641] Length = 310 Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 42/130 (32%), Positives = 67/130 (51%), Gaps = 2/130 (1%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ILD+ TG+G + +A P + VDIS L + + N +G+ + ++SD F Sbjct: 135 HILDMCTGSGCIAIACAYAFPEAEVDAVDISNDVLAVTEHNIQQHGMEHQVTPIRSDLFR 194 Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 + + +D+IV+NPPY+++ + L E R F+P + L G DGL R I L Sbjct: 195 DLPPIKYDLIVTNPPYVDAEDMADLPQEFR-FEPELGLAAGSDGLKLARRILACAPDFLQ 253 Query: 219 KDGLCSVEIG 228 DG+ E+G Sbjct: 254 DDGVLICEVG 263 >gi|229846231|ref|ZP_04466343.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Haemophilus influenzae 7P49H1] gi|229811235|gb|EEP46952.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Haemophilus influenzae 7P49H1] Length = 314 Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 42/141 (29%), Positives = 77/141 (54%), Gaps = 3/141 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ILDL TG+G + +A P + +D+S AL +A+ N + + R +QS+ F Sbjct: 144 HILDLCTGSGCIAIACAYAFPNAEVDAIDLSVDALNVAEINISRHQLEHRVFPIQSNLFE 203 Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 ++ G +D+IV+NPPY++ + + E F+P ++L G DGL+ + I +L+ Sbjct: 204 NILGQKYDLIVTNPPYVDEEDLADMPEEFH-FEPELALGSGHDGLNITKQILKLAPNYLS 262 Query: 219 KDGLCSVEIGYNQKVDVVRIF 239 ++G+ E+G N V ++ + Sbjct: 263 ENGVLVCEVG-NSMVSLIEQY 282 >gi|227887390|ref|ZP_04005195.1| site-specific DNA-methyltransferase (adenine-specific) [Escherichia coli 83972] gi|300983554|ref|ZP_07176648.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Escherichia coli MS 45-1] gi|301049089|ref|ZP_07196073.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Escherichia coli MS 185-1] gi|227835740|gb|EEJ46206.1| site-specific DNA-methyltransferase (adenine-specific) [Escherichia coli 83972] gi|300299136|gb|EFJ55521.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Escherichia coli MS 185-1] gi|300408516|gb|EFJ92054.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Escherichia coli MS 45-1] gi|307554392|gb|ADN47167.1| ribosomal large subunit L3 protein glutamine methyltransferase [Escherichia coli ABU 83972] gi|315292263|gb|EFU51615.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Escherichia coli MS 153-1] Length = 310 Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 43/130 (33%), Positives = 69/130 (53%), Gaps = 2/130 (1%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ILD+ TG+G + +A P + VDIS AL +A+ N +G+ ++SD F Sbjct: 135 HILDMCTGSGCIAIACAYAFPEAEVDAVDISPDALAVAEQNIEEHGLIHNVIPIRSDLFR 194 Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 + + +D+IV+NPPY+++ + L E R +P + L G DGL R I + +L Sbjct: 195 DLPKVQYDLIVTNPPYVDAEDMSDLPNEYR-HEPELGLASGTDGLKLTRRILGNAADYLA 253 Query: 219 KDGLCSVEIG 228 DG+ E+G Sbjct: 254 DDGVLICEVG 263 >gi|323168496|gb|EFZ54176.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Shigella sonnei 53G] Length = 310 Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 43/130 (33%), Positives = 69/130 (53%), Gaps = 2/130 (1%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ILD+ TG+G + +A P + VDIS AL +A+ N +G+ ++SD F Sbjct: 135 HILDMCTGSGCIAIACAYAFPEAEVDAVDISPDALAVAEQNIEEHGLIHNVIPIRSDLFR 194 Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 + + +D+IV+NPPY+++ + L E R +P + L G DGL R I + +L Sbjct: 195 DLPKVQYDLIVTNPPYVDAEDMSDLPNEYR-HEPELGLASGTDGLKLTRRILGNAADYLA 253 Query: 219 KDGLCSVEIG 228 DG+ E+G Sbjct: 254 DDGVLICEVG 263 >gi|191169919|ref|ZP_03031473.1| ribosomal large subunit L3 protein glutamine methyltransferase [Escherichia coli F11] gi|300986871|ref|ZP_07177853.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Escherichia coli MS 200-1] gi|331647987|ref|ZP_08349079.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Escherichia coli M605] gi|190909435|gb|EDV69020.1| ribosomal large subunit L3 protein glutamine methyltransferase [Escherichia coli F11] gi|281179417|dbj|BAI55747.1| putative adenine-specific methylase [Escherichia coli SE15] gi|300306360|gb|EFJ60880.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Escherichia coli MS 200-1] gi|324015380|gb|EGB84599.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Escherichia coli MS 60-1] gi|330912149|gb|EGH40659.1| ribosomal protein L3 methyltransferase [Escherichia coli AA86] gi|331043711|gb|EGI15849.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Escherichia coli M605] Length = 310 Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 43/130 (33%), Positives = 69/130 (53%), Gaps = 2/130 (1%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ILD+ TG+G + +A P + VDIS AL +A+ N +G+ ++SD F Sbjct: 135 HILDMCTGSGCIAIACAYAFPEAEVDAVDISPDALAVAEQNIEEHGLIHNVIPIRSDLFR 194 Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 + + +D+IV+NPPY+++ + L E R +P + L G DGL R I + +L Sbjct: 195 DLPKVQYDLIVTNPPYVDAEDMSDLPNEYR-HEPELGLASGTDGLKLTRRILGNAADYLA 253 Query: 219 KDGLCSVEIG 228 DG+ E+G Sbjct: 254 DDGVLICEVG 263 >gi|15612065|ref|NP_223717.1| protoporphyrinogen oxidase [Helicobacter pylori J99] gi|4155582|gb|AAD06575.1| PROTOPORPHYRINOGEN OXIDASE [Helicobacter pylori J99] Length = 276 Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 66/230 (28%), Positives = 102/230 (44%), Gaps = 25/230 (10%) Query: 35 RFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIE 94 RFF + + L I +LG DFY ++ PRPETE+LV AL I Sbjct: 55 RFF--ELVGKRLNDCPIEYLLGSCDFYGRSFFVNEHVLIPRPETEILVQKALNI----IS 108 Query: 95 KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154 + + I ++G G+G V ++L E+P DIS KALE+A N + ER Q Sbjct: 109 QYHLKEIGEIGIGSGCVSVSLALENPNLSIYASDISPKALEVALKNIERFCLKERVFLKQ 168 Query: 155 SDWFSSVEGLFDVIVSNPPYI------ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208 + + + + +++VSNPPYI E ++ +P +L GG+ G + Sbjct: 169 TRLWDHMPTI-EMLVSNPPYIARNYPLEKSVLK---------EPHEALFGGVKGDEILKE 218 Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258 I ++ K E+GY+Q + E + +KD G DR Sbjct: 219 IVFLAAKL--KIPFLVCEMGYDQLKSLKECLEFCG-YDAEFYKDLSGFDR 265 >gi|191165479|ref|ZP_03027320.1| ribosomal large subunit L3 protein glutamine methyltransferase [Escherichia coli B7A] gi|194436322|ref|ZP_03068424.1| ribosomal large subunit L3 protein glutamine methyltransferase [Escherichia coli 101-1] gi|209919830|ref|YP_002293914.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli SE11] gi|218695929|ref|YP_002403596.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli 55989] gi|253772746|ref|YP_003035577.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254162339|ref|YP_003045447.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli B str. REL606] gi|256017512|ref|ZP_05431377.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Shigella sp. D9] gi|260856374|ref|YP_003230265.1| N5-glutamine methyltransferase [Escherichia coli O26:H11 str. 11368] gi|260869052|ref|YP_003235454.1| N5-glutamine methyltransferase [Escherichia coli O111:H- str. 11128] gi|300822206|ref|ZP_07102348.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Escherichia coli MS 119-7] gi|300903722|ref|ZP_07121637.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Escherichia coli MS 84-1] gi|300922056|ref|ZP_07138198.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Escherichia coli MS 182-1] gi|301304873|ref|ZP_07210977.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Escherichia coli MS 124-1] gi|301328836|ref|ZP_07221878.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Escherichia coli MS 78-1] gi|309793214|ref|ZP_07687642.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Escherichia coli MS 145-7] gi|312973409|ref|ZP_07787581.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Escherichia coli 1827-70] gi|331669030|ref|ZP_08369878.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Escherichia coli TA271] gi|331678277|ref|ZP_08378952.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Escherichia coli H591] gi|190904402|gb|EDV64110.1| ribosomal large subunit L3 protein glutamine methyltransferase [Escherichia coli B7A] gi|194425050|gb|EDX41035.1| ribosomal large subunit L3 protein glutamine methyltransferase [Escherichia coli 101-1] gi|209913089|dbj|BAG78163.1| putative adenine-specific methylase [Escherichia coli SE11] gi|218352661|emb|CAU98442.1| N5-glutamine methyltransferase [Escherichia coli 55989] gi|242377963|emb|CAQ32732.1| N5-glutamine methyltransferase [Escherichia coli BL21(DE3)] gi|253323790|gb|ACT28392.1| modification methylase, HemK family [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253974240|gb|ACT39911.1| N5-glutamine methyltransferase [Escherichia coli B str. REL606] gi|253978407|gb|ACT44077.1| N5-glutamine methyltransferase [Escherichia coli BL21(DE3)] gi|257755023|dbj|BAI26525.1| N5-glutamine methyltransferase [Escherichia coli O26:H11 str. 11368] gi|257765408|dbj|BAI36903.1| N5-glutamine methyltransferase [Escherichia coli O111:H- str. 11128] gi|300404304|gb|EFJ87842.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Escherichia coli MS 84-1] gi|300421556|gb|EFK04867.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Escherichia coli MS 182-1] gi|300525336|gb|EFK46405.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Escherichia coli MS 119-7] gi|300839802|gb|EFK67562.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Escherichia coli MS 124-1] gi|300844785|gb|EFK72545.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Escherichia coli MS 78-1] gi|308123500|gb|EFO60762.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Escherichia coli MS 145-7] gi|310332004|gb|EFP99239.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Escherichia coli 1827-70] gi|315255268|gb|EFU35236.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Escherichia coli MS 85-1] gi|320199921|gb|EFW74510.1| Ribosomal protein L3 methyltransferase [Escherichia coli EC4100B] gi|323156482|gb|EFZ42637.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Escherichia coli EPECa14] gi|323176744|gb|EFZ62334.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Escherichia coli 1180] gi|323961403|gb|EGB57014.1| protein-(glutamine-N5) methyltransferase [Escherichia coli H489] gi|323970953|gb|EGB66204.1| protein-(glutamine-N5) methyltransferase [Escherichia coli TA007] gi|324020853|gb|EGB90072.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Escherichia coli MS 117-3] gi|324117792|gb|EGC11691.1| protein-(glutamine-N5) methyltransferase [Escherichia coli E1167] gi|331064224|gb|EGI36135.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Escherichia coli TA271] gi|331074737|gb|EGI46057.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Escherichia coli H591] Length = 310 Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 43/130 (33%), Positives = 69/130 (53%), Gaps = 2/130 (1%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ILD+ TG+G + +A P + VDIS AL +A+ N +G+ ++SD F Sbjct: 135 HILDMCTGSGCIAIACAYAFPEAEVDAVDISPDALAVAEQNIEEHGLIHNVIPIRSDLFR 194 Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 + + +D+IV+NPPY+++ + L E R +P + L G DGL R I + +L Sbjct: 195 DLPKVQYDLIVTNPPYVDAEDMSDLPNEYR-HEPELGLASGTDGLKLTRRILGNAADYLA 253 Query: 219 KDGLCSVEIG 228 DG+ E+G Sbjct: 254 DDGVLICEVG 263 >gi|313651155|gb|EFS15554.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Shigella flexneri 2a str. 2457T] gi|332755380|gb|EGJ85744.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Shigella flexneri K-671] gi|332756543|gb|EGJ86894.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Shigella flexneri 2747-71] gi|332766150|gb|EGJ96360.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Shigella flexneri 2930-71] gi|333016296|gb|EGK35627.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Shigella flexneri K-304] Length = 310 Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 43/130 (33%), Positives = 69/130 (53%), Gaps = 2/130 (1%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ILD+ TG+G + +A P + VDIS AL +A+ N +G+ ++SD F Sbjct: 135 HILDMCTGSGCIAIACAYAFPEAEVDAVDISPDALAVAEQNIEEHGLIHNVIPIRSDLFR 194 Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 + + +D+IV+NPPY+++ + L E R +P + L G DGL R I + +L Sbjct: 195 DLPKVQYDLIVTNPPYVDAEDMSDLPNEYR-HEPELGLASGTDGLKLTRRILGNAADYLA 253 Query: 219 KDGLCSVEIG 228 DG+ E+G Sbjct: 254 DDGVLICEVG 263 >gi|108563436|ref|YP_627752.1| S-adenosylmethionine-dependent methyltransferase [Helicobacter pylori HPAG1] gi|107837209|gb|ABF85078.1| S-adenosylmethionine-dependent methyltransferase [Helicobacter pylori HPAG1] Length = 274 Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 51/160 (31%), Positives = 76/160 (47%), Gaps = 24/160 (15%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110 I +LG DFY ++ PRPETE+LV AL I + + I ++G G+G Sbjct: 69 IEYLLGSCDFYGRSFFVNEHVLIPRPETEILVQKALDI----ISQYHLKEIGEIGVGSGC 124 Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170 V ++L E+P DIS KALE+A N + ER Q+ + + + +++VS Sbjct: 125 VSISLALENPKLSIHASDISLKALEVASKNIERFCLKERVFLKQTRLWDRMPTI-EMLVS 183 Query: 171 NPPYIESVIVDCLGLEVRDF--------DPRISLDGGIDG 202 NPPYI RD+ +P +L GG+ G Sbjct: 184 NPPYI-----------ARDYPLEKSVLKEPHEALFGGVKG 212 >gi|324009251|gb|EGB78470.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Escherichia coli MS 57-2] Length = 310 Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 43/130 (33%), Positives = 69/130 (53%), Gaps = 2/130 (1%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ILD+ TG+G + +A P + VDIS AL +A+ N +G+ ++SD F Sbjct: 135 HILDMCTGSGCIAIACAYAFPEAEVDAVDISPDALAVAEQNIEEHGLIHNVIPIRSDLFR 194 Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 + + +D+IV+NPPY+++ + L E R +P + L G DGL R I + +L Sbjct: 195 DLPKVQYDLIVTNPPYVDAEDMSDLPNEYR-HEPELGLASGTDGLKLTRRILGNAADYLA 253 Query: 219 KDGLCSVEIG 228 DG+ E+G Sbjct: 254 DDGVLICEVG 263 >gi|306814558|ref|ZP_07448720.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli NC101] gi|305851952|gb|EFM52404.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli NC101] Length = 310 Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 43/130 (33%), Positives = 69/130 (53%), Gaps = 2/130 (1%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ILD+ TG+G + +A P + VDIS AL +A+ N +G+ ++SD F Sbjct: 135 HILDMCTGSGCIAIACAYAFPEAEVDAVDISPDALAVAEQNIEEHGLIHNVIPIRSDLFR 194 Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 + + +D+IV+NPPY+++ + L E R +P + L G DGL R I + +L Sbjct: 195 DLPKVQYDLIVTNPPYVDAEDMSDLPNEYR-HEPELGLASGTDGLKLTRRILGNAADYLA 253 Query: 219 KDGLCSVEIG 228 DG+ E+G Sbjct: 254 DDGVLICEVG 263 >gi|300717709|ref|YP_003742512.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Erwinia billingiae Eb661] gi|299063545|emb|CAX60665.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Erwinia billingiae Eb661] Length = 310 Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 47/156 (30%), Positives = 78/156 (50%), Gaps = 6/156 (3%) Query: 74 PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133 PR L++ A +P K ILD+ TG+G + +A P + VDIS A Sbjct: 113 PRSPIGELINDRFAALIPDEPKY----ILDMCTGSGCIAIACAYAFPDAEVDAVDISTDA 168 Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDP 192 L + + N +G++ +++D F + + +D+IV+NPPY++ +D L E R +P Sbjct: 169 LAVTEQNIEAHGLTHSVTPIRADLFRELPKTPYDLIVTNPPYVDEDDMDDLPNEYR-HEP 227 Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228 + L G DGL R I +L++ G+ E+G Sbjct: 228 ELGLAAGRDGLKLARRILANAPDYLSEQGVLICEVG 263 >gi|325496630|gb|EGC94489.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia fergusonii ECD227] Length = 310 Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 43/130 (33%), Positives = 69/130 (53%), Gaps = 2/130 (1%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ILD+ TG+G + +A P + VDIS AL +A+ N +G+ ++SD F Sbjct: 135 HILDMCTGSGCIAIACAYAFPEAEVDAVDISPDALAVAEQNIEEHGLIHNVIPIRSDLFR 194 Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 + + +D+IV+NPPY+++ + L E R +P + L G DGL R I + +L Sbjct: 195 DLPKVQYDLIVTNPPYVDAEDMSDLPNEYR-HEPELGLASGTDGLKLTRRILGNAADYLA 253 Query: 219 KDGLCSVEIG 228 DG+ E+G Sbjct: 254 DDGVLICEVG 263 >gi|333002700|gb|EGK22260.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Shigella flexneri K-272] gi|333016583|gb|EGK35913.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Shigella flexneri K-227] Length = 310 Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 43/130 (33%), Positives = 69/130 (53%), Gaps = 2/130 (1%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ILD+ TG+G + +A P + VDIS AL +A+ N +G+ ++SD F Sbjct: 135 HILDMCTGSGCIAIACAYAFPEAEVDAVDISPDALAVAEQNIEEHGLIHNVIPIRSDLFR 194 Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 + + +D+IV+NPPY+++ + L E R +P + L G DGL R I + +L Sbjct: 195 DLPKVQYDLIVTNPPYVDAEDMSDLPNEYR-HEPELGLASGTDGLKLTRRILGNAADYLA 253 Query: 219 KDGLCSVEIG 228 DG+ E+G Sbjct: 254 DDGVLICEVG 263 >gi|193062223|ref|ZP_03043318.1| ribosomal large subunit L3 protein glutamine methyltransferase [Escherichia coli E22] gi|194429280|ref|ZP_03061807.1| ribosomal large subunit L3 protein glutamine methyltransferase [Escherichia coli B171] gi|218548215|ref|YP_002382006.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia fergusonii ATCC 35469] gi|218559243|ref|YP_002392156.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli S88] gi|260844918|ref|YP_003222696.1| N5-glutamine methyltransferase [Escherichia coli O103:H2 str. 12009] gi|300918497|ref|ZP_07135090.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Escherichia coli MS 115-1] gi|331684003|ref|ZP_08384599.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Escherichia coli H299] gi|192931889|gb|EDV84488.1| ribosomal large subunit L3 protein glutamine methyltransferase [Escherichia coli E22] gi|194412688|gb|EDX28983.1| ribosomal large subunit L3 protein glutamine methyltransferase [Escherichia coli B171] gi|218355756|emb|CAQ88369.1| N5-glutamine methyltransferase [Escherichia fergusonii ATCC 35469] gi|218366012|emb|CAR03756.1| N5-glutamine methyltransferase [Escherichia coli S88] gi|257760065|dbj|BAI31562.1| N5-glutamine methyltransferase [Escherichia coli O103:H2 str. 12009] gi|294493265|gb|ADE92021.1| ribosomal large subunit L3 protein glutamine methyltransferase [Escherichia coli IHE3034] gi|300414311|gb|EFJ97621.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Escherichia coli MS 115-1] gi|307626133|gb|ADN70437.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli UM146] gi|315288305|gb|EFU47704.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Escherichia coli MS 110-3] gi|323162221|gb|EFZ48081.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Escherichia coli E128010] gi|323170399|gb|EFZ56052.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Escherichia coli LT-68] gi|323952123|gb|EGB47997.1| protein-(glutamine-N5) methyltransferase [Escherichia coli H252] gi|323955852|gb|EGB51607.1| protein-(glutamine-N5) methyltransferase [Escherichia coli H263] gi|324112867|gb|EGC06843.1| protein-(glutamine-N5) methyltransferase [Escherichia fergusonii B253] gi|331078955|gb|EGI50157.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Escherichia coli H299] gi|332754980|gb|EGJ85345.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Shigella flexneri 4343-70] gi|333001804|gb|EGK21370.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Shigella flexneri K-218] Length = 310 Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 43/130 (33%), Positives = 69/130 (53%), Gaps = 2/130 (1%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ILD+ TG+G + +A P + VDIS AL +A+ N +G+ ++SD F Sbjct: 135 HILDMCTGSGCIAIACAYAFPEAEVDAVDISPDALAVAEQNIEEHGLIHNVIPIRSDLFR 194 Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 + + +D+IV+NPPY+++ + L E R +P + L G DGL R I + +L Sbjct: 195 DLPKVQYDLIVTNPPYVDAEDMSDLPNEYR-HEPELGLASGTDGLKLTRRILGNAADYLA 253 Query: 219 KDGLCSVEIG 228 DG+ E+G Sbjct: 254 DDGVLICEVG 263 >gi|13358170|ref|NP_078454.1| hypothetical protein UU004m [Ureaplasma parvum serovar 3 str. ATCC 700970] gi|167971168|ref|ZP_02553445.1| methyltransferase, HemK family [Ureaplasma parvum serovar 6 str. ATCC 27818] gi|168282012|ref|ZP_02689679.1| methyltransferase, HemK family [Ureaplasma parvum serovar 14 str. ATCC 33697] gi|170761878|ref|YP_001752084.1| HemK family methyltransferase [Ureaplasma parvum serovar 3 str. ATCC 27815] gi|168827455|gb|ACA32717.1| methyltransferase, HemK family [Ureaplasma parvum serovar 3 str. ATCC 27815] gi|182676092|gb|EDT87997.1| methyltransferase, HemK family [Ureaplasma parvum serovar 14 str. ATCC 33697] gi|186700877|gb|EDU19159.1| methyltransferase, HemK family [Ureaplasma parvum serovar 6 str. ATCC 27818] Length = 290 Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 60/215 (27%), Positives = 101/215 (46%), Gaps = 11/215 (5%) Query: 53 RILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVC 112 RILG+ F R + + F R ETELL+D + + + + ++D+ G+G + Sbjct: 72 RILGYGYFCAKRFYVDKNVFAFRVETELLID--VVNKVIQQSTYKIKNVIDVCCGSGVLG 129 Query: 113 LALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE--RFDTLQSDWFSSVEGLFDVIVS 170 L+ +DIS A+ K NA + +++ ++F + + FD+I+ Sbjct: 130 LSTKMNFNQLNVSLLDISIDAINNCKKNAKYHNLTDVNFIHKSMQEYFLNTKKRFDLIIC 189 Query: 171 NPPYIESVIVDCLGLEVRDFDP---RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227 NPPYI+S L EV D+DP I D DG+S Y I + + N+ EI Sbjct: 190 NPPYIKSNYE--LNREVLDYDPINALIDFDHK-DGISFYLFIINNIKSIANEKFTIIFEI 246 Query: 228 GYNQKVDVVRIFESRKLFLVNAF-KDYGGNDRVLL 261 G++QK + ++ + + L F DY R+L+ Sbjct: 247 GFDQKEILEKVIKKNEFPLFYYFINDYNNLCRILI 281 >gi|305681978|ref|ZP_07404782.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Corynebacterium matruchotii ATCC 14266] gi|305658451|gb|EFM47954.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Corynebacterium matruchotii ATCC 14266] Length = 279 Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 63/224 (28%), Positives = 91/224 (40%), Gaps = 9/224 (4%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101 I R E + ILG F + LT+ F PRPETE L D + + I Sbjct: 59 ISRRAHREPLQHILGTAPFGPLTLTVGPGVFIPRPETEQLAD----WVATHLGNTPNPLI 114 Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSDWFSS 160 +DL TG+GA+ L P V++S +AL +N GV+ D Sbjct: 115 IDLCTGSGAIADYLAHARPDANIYAVELSPEALTYTHTNLDPLGVTIIAGDATNPTLLEH 174 Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220 + G +V+NPPY+ L EV DP +++ GG G+ + R L Sbjct: 175 LNGKATAVVTNPPYVPHTT--DLQPEVY-ADPPMAVFGGDTGMDVITRLIPTARRLLAPG 231 Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR-VLLFC 263 G+ + E DVV++ L V +D+ G R V C Sbjct: 232 GVFACEHDDTTGPDVVKLVAEAGLRQVTQHQDWAGQPRFVTAIC 275 >gi|157155888|ref|YP_001463675.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli E24377A] gi|218690490|ref|YP_002398702.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli ED1a] gi|218700806|ref|YP_002408435.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli IAI39] gi|293446667|ref|ZP_06663089.1| protein-(glutamine-N5) methyltransferase [Escherichia coli B088] gi|307311109|ref|ZP_07590753.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Escherichia coli W] gi|309784960|ref|ZP_07679593.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Shigella dysenteriae 1617] gi|331673831|ref|ZP_08374594.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Escherichia coli TA280] gi|157077918|gb|ABV17626.1| ribosomal large subunit L3 protein glutamine methyltransferase [Escherichia coli E24377A] gi|218370792|emb|CAR18605.1| N5-glutamine methyltransferase [Escherichia coli IAI39] gi|218428054|emb|CAR08973.2| N5-glutamine methyltransferase [Escherichia coli ED1a] gi|291323497|gb|EFE62925.1| protein-(glutamine-N5) methyltransferase [Escherichia coli B088] gi|306908615|gb|EFN39112.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Escherichia coli W] gi|308927330|gb|EFP72804.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Shigella dysenteriae 1617] gi|315061623|gb|ADT75950.1| N5-glutamine methyltransferase [Escherichia coli W] gi|320196199|gb|EFW70823.1| Ribosomal protein L3 methyltransferase [Escherichia coli WV_060327] gi|323184350|gb|EFZ69726.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Escherichia coli 1357] gi|323377796|gb|ADX50064.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Escherichia coli KO11] gi|331069104|gb|EGI40496.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Escherichia coli TA280] gi|333001475|gb|EGK21043.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Shigella flexneri VA-6] Length = 310 Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 43/130 (33%), Positives = 69/130 (53%), Gaps = 2/130 (1%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ILD+ TG+G + +A P + VDIS AL +A+ N +G+ ++SD F Sbjct: 135 HILDMCTGSGCIAIACAYAFPEAEVDAVDISPDALAVAEQNIEEHGLIHNVIPIRSDLFR 194 Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 + + +D+IV+NPPY+++ + L E R +P + L G DGL R I + +L Sbjct: 195 DLPKVQYDLIVTNPPYVDAEDMSDLPNEYR-HEPELGLASGTDGLKLTRRILGNAADYLA 253 Query: 219 KDGLCSVEIG 228 DG+ E+G Sbjct: 254 DDGVLICEVG 263 >gi|323967772|gb|EGB63184.1| protein-(glutamine-N5) methyltransferase [Escherichia coli M863] gi|323977468|gb|EGB72554.1| protein-(glutamine-N5) methyltransferase [Escherichia coli TW10509] gi|327252601|gb|EGE64260.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Escherichia coli STEC_7v] Length = 310 Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 43/130 (33%), Positives = 69/130 (53%), Gaps = 2/130 (1%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ILD+ TG+G + +A P + VDIS AL +A+ N +G+ ++SD F Sbjct: 135 HILDMCTGSGCIAIACAYAFPEAEVDAVDISPDALAVAEQNIEEHGLIHNVIPIRSDLFR 194 Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 + + +D+IV+NPPY+++ + L E R +P + L G DGL R I + +L Sbjct: 195 DLPKVQYDLIVTNPPYVDAEDMSDLPNEYR-HEPELGLASGTDGLKLTRRILGNAADYLA 253 Query: 219 KDGLCSVEIG 228 DG+ E+G Sbjct: 254 DDGVLICEVG 263 >gi|51596952|ref|YP_071143.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Yersinia pseudotuberculosis IP 32953] gi|51590234|emb|CAH21871.1| conserved hypothetical protein [Yersinia pseudotuberculosis IP 32953] Length = 333 Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 42/130 (32%), Positives = 67/130 (51%), Gaps = 2/130 (1%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ILD+ TG+G + +A P + VDIS L + + N +G+ + ++SD F Sbjct: 158 HILDMCTGSGCIAIACAYAFPDAEVDAVDISNDVLAVTEHNIQQHGMEHQVTPIRSDLFR 217 Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 + + +D+IV+NPPY+++ + L E R F+P + L G DGL R I L Sbjct: 218 DLPPIKYDLIVTNPPYVDAEDMADLPQEFR-FEPELGLAAGSDGLKLARRILACAPDFLQ 276 Query: 219 KDGLCSVEIG 228 DG+ E+G Sbjct: 277 DDGVLICEVG 286 >gi|22125479|ref|NP_668902.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Yersinia pestis KIM 10] gi|45442202|ref|NP_993741.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Yersinia pestis biovar Microtus str. 91001] gi|21958373|gb|AAM85153.1|AE013761_6 putative adenine-specific methylase [Yersinia pestis KIM 10] gi|45437066|gb|AAS62618.1| Predicted rRNA or tRNA methylase [Yersinia pestis biovar Microtus str. 91001] Length = 333 Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 42/130 (32%), Positives = 67/130 (51%), Gaps = 2/130 (1%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ILD+ TG+G + +A P + VDIS L + + N +G+ + ++SD F Sbjct: 158 HILDMCTGSGCIAIACAYAFPDAEVDAVDISNDVLAVTEHNIQQHGMEHQVTPIRSDLFR 217 Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 + + +D+IV+NPPY+++ + L E R F+P + L G DGL R I L Sbjct: 218 DLPPIKYDLIVTNPPYVDAEDMADLPQEFR-FEPELGLAAGSDGLKLARRILACAPDFLQ 276 Query: 219 KDGLCSVEIG 228 DG+ E+G Sbjct: 277 DDGVLICEVG 286 >gi|123441616|ref|YP_001005601.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122088577|emb|CAL11372.1| conserved hypothetical protein [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 310 Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 42/130 (32%), Positives = 67/130 (51%), Gaps = 2/130 (1%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ILD+ TG+G + +A P + VDIS L + + N +G+ + ++SD F Sbjct: 135 HILDMCTGSGCIAIACAYAFPEAEVDAVDISNDVLAVTEHNIQQHGMEHQVTPIRSDLFR 194 Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 + + +D+IV+NPPY+++ + L E R F+P + L G DGL R I L Sbjct: 195 DLPPIKYDLIVTNPPYVDAEDMADLPQEFR-FEPELGLAAGSDGLKLARRILACAPDFLQ 253 Query: 219 KDGLCSVEIG 228 DG+ E+G Sbjct: 254 DDGVLICEVG 263 >gi|307637738|gb|ADN80188.1| protoporphyrinogen oxidase [Helicobacter pylori 908] gi|325996339|gb|ADZ51744.1| S-adenosylmethionine-dependent methyltransferase [Helicobacter pylori 2018] gi|325997928|gb|ADZ50136.1| protoporphyrinogen oxidase [Helicobacter pylori 2017] Length = 276 Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 65/237 (27%), Positives = 102/237 (43%), Gaps = 27/237 (11%) Query: 30 LDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFS 89 L ++ + + L I +LG DFY ++ PRPETE+LV AL Sbjct: 48 LSHKEEVHFFELVGKRLNDCPIEYLLGSCDFYGRSFFVNEHVLIPRPETEILVQKALDI- 106 Query: 90 LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 I + + I ++G G+G V ++L E+P DIS KALE+A N + ER Sbjct: 107 ---ISQYHLKEIGEIGIGSGCVSVSLALENPKLCIHASDISPKALEVALKNIERFCLKER 163 Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDF--------DPRISLDGGID 201 Q+ + + + +++VSNPPYI RD+ +P +L GG+ Sbjct: 164 VFLKQTCLWDHMP-MIEMLVSNPPYI-----------ARDYPLEKSVLKEPHEALFGGVK 211 Query: 202 GLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258 G + I ++ K E+GY+Q + E + +KD G DR Sbjct: 212 GDEILKEIIFLAAK--LKIPFLVCEMGYDQLKSLKECLEFCG-YNAEFYKDLSGFDR 265 >gi|310287871|ref|YP_003939129.1| Peptide release factor-glutamine N5-methyltransferase [Bifidobacterium bifidum S17] gi|309251807|gb|ADO53555.1| Peptide release factor-glutamine N5-methyltransferase [Bifidobacterium bifidum S17] Length = 329 Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 64/234 (27%), Positives = 97/234 (41%), Gaps = 14/234 (5%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101 I R E + I G F + L + F PRPETE +V + + + L R E+ RI Sbjct: 98 IARRAAREPLQYITGHAPFRYLDLEVGPGVFIPRPETETVVQAGIDW-LTR-ERLSTPRI 155 Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN----------AVTNGVSERFD 151 +DL G+GA+ L+L+ E + V+ + + N A N E D Sbjct: 156 VDLCAGSGAIGLSLVTEVRGAQVWAVEKVPRTYDWTMRNWRRISRLDPLAADNYHLELGD 215 Query: 152 TLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG-IDGLSHYRTIA 210 + +G D++V+NPPYI + EVRD DP+ +L GG DG I Sbjct: 216 ATSGTTLAQFDGTIDMVVTNPPYIPEAQIPEQP-EVRDHDPKAALYGGSADGTLIPERIV 274 Query: 211 DGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 + L G+ +E +Q +V ++ D+ G R L R Sbjct: 275 MRAAGLLRPGGVLVMEHDISQGPRLVSFAQANGFGQAYTGDDWTGRPRYLFAVR 328 >gi|297521848|ref|ZP_06940234.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli OP50] Length = 287 Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 43/130 (33%), Positives = 69/130 (53%), Gaps = 2/130 (1%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ILD+ TG+G + +A P + VDIS AL +A+ N +G+ ++SD F Sbjct: 135 HILDMCTGSGCIAIACAYAFPEAEVDAVDISPDALAVAEQNIEEHGLIHNVIPIRSDLFR 194 Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 + + +D+IV+NPPY+++ + L E R +P + L G DGL R I + +L Sbjct: 195 DLPKVQYDLIVTNPPYVDAEDMSDLPNEYR-HEPELGLASGTDGLKLTRRILGNAADYLA 253 Query: 219 KDGLCSVEIG 228 DG+ E+G Sbjct: 254 DDGVLICEVG 263 >gi|332162448|ref|YP_004299025.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|318606536|emb|CBY28034.1| ribosomal protein L3 methyltransferase [Yersinia enterocolitica subsp. palearctica Y11] gi|325666678|gb|ADZ43322.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330861267|emb|CBX71515.1| uncharacterized adenine-specific methylase yfcB [Yersinia enterocolitica W22703] Length = 310 Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 42/130 (32%), Positives = 67/130 (51%), Gaps = 2/130 (1%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ILD+ TG+G + +A P + VDIS L + + N +G+ + ++SD F Sbjct: 135 HILDMCTGSGCIAIACAYAFPEAEVDAVDISNDVLAVTEHNIQQHGMEHQVTPIRSDLFR 194 Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 + + +D+IV+NPPY+++ + L E R F+P + L G DGL R I L Sbjct: 195 DLPPIKYDLIVTNPPYVDAEDMADLPQEFR-FEPELGLAAGSDGLKLARRILACAPDFLQ 253 Query: 219 KDGLCSVEIG 228 DG+ E+G Sbjct: 254 DDGVLICEVG 263 >gi|254480651|ref|ZP_05093898.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [marine gamma proteobacterium HTCC2148] gi|214039234|gb|EEB79894.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [marine gamma proteobacterium HTCC2148] Length = 305 Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 44/129 (34%), Positives = 69/129 (53%), Gaps = 3/129 (2%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 ILDL G G + LA + D+ +L +AK N +++R + QSD F Sbjct: 135 ILDLCCGGGCIGLAAAHHGQASVDLA-DLDADSLALAKENRARLQLTDRVEIYQSDLFDE 193 Query: 161 V-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 + E +D+I+SNPPY++S + + E +P +SL G DGL+ R I + +L++ Sbjct: 194 LPEKRYDLILSNPPYVDSADLASMPAEYH-HEPELSLGSGPDGLALTRRILSQAANYLHE 252 Query: 220 DGLCSVEIG 228 DGL VE+G Sbjct: 253 DGLLVVEVG 261 >gi|292488901|ref|YP_003531788.1| putative adenine-specific methylase [Erwinia amylovora CFBP1430] gi|292900045|ref|YP_003539414.1| methyltransferase [Erwinia amylovora ATCC 49946] gi|291199893|emb|CBJ47017.1| putative methyltransferase [Erwinia amylovora ATCC 49946] gi|291554335|emb|CBA21715.1| putative adenine-specific methylase [Erwinia amylovora CFBP1430] Length = 310 Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 49/166 (29%), Positives = 85/166 (51%), Gaps = 6/166 (3%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ILD+ TG+G + +A P + VDIS AL + + N +G+ + ++ D F Sbjct: 135 HILDMCTGSGCIAIACAWAFPQAEVDAVDISGDALAVTEQNISAHGLEQHVTPIRCDLFR 194 Query: 160 SV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 + + +D+IV+NPPY+++ +D L E R +P + L G DGL+ R I + +L+ Sbjct: 195 ELPKTQYDLIVTNPPYVDADDMDDLPNEYR-HEPELGLAAGNDGLTLARRILGCAADYLS 253 Query: 219 KDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 + G+ E+G N V ++ + F F++ G D V + R Sbjct: 254 EQGVLICEVG-NSMVHLINQYPDVP-FTWLEFEN--GGDGVFMLTR 295 >gi|289192702|ref|YP_003458643.1| methylase [Methanocaldococcus sp. FS406-22] gi|288939152|gb|ADC69907.1| methylase [Methanocaldococcus sp. FS406-22] Length = 197 Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 50/163 (30%), Positives = 84/163 (51%), Gaps = 16/163 (9%) Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 ++L L + +EP ++ LL+ + L ++ ++V L++G GTG + +A K+ Sbjct: 8 IKLKLHPEVYEPAEDSILLLKN-----LVNVKNKEV---LEIGIGTGLISIACAKKGAK- 58 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182 K VGVDI+ A+++AK NA N V F +SD F +V G FD+I+ NPPY+ + D Sbjct: 59 KVVGVDINPYAVKLAKENAKLNNVDVLF--FESDLFENVNGKFDIILFNPPYLPTSEDDK 116 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225 + + + DGG DG + +L K G+ + Sbjct: 117 INSYL-----NYAFDGGKDGREILDRFIYNLPNYLKKGGVAQI 154 >gi|15669118|ref|NP_247923.1| protoporphyrinogen oxidase HemK [Methanocaldococcus jannaschii DSM 2661] gi|3024936|sp|Q58338|Y928_METJA RecName: Full=Putative protein methyltransferase MJ0928; AltName: Full=M.MjaHemkP gi|1591599|gb|AAB98930.1| protoporphyrinogen oxidase (hemK) [Methanocaldococcus jannaschii DSM 2661] Length = 197 Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 53/165 (32%), Positives = 85/165 (51%), Gaps = 20/165 (12%) Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 ++L L + +EP ++ LL+ + L ++ +DV L++G GTG + +A K+ Sbjct: 8 IKLKLHPEVYEPAEDSILLLKN-----LVDVKNKDV---LEIGVGTGLISIACAKKGAK- 58 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182 K VGVDI+ A+++AK NA N V+ F +SD F +V G FDVI+ NPPY+ + Sbjct: 59 KIVGVDINPYAVKLAKENAKLNNVNISF--FESDLFENVTGKFDVILFNPPYLPTS---- 112 Query: 183 LGLEVRDFDPRI--SLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225 E D + + DGG DG + +L K G+ + Sbjct: 113 ---EDEKIDSYLNFAFDGGKDGREILDRFIYELPNYLKKGGVVQI 154 >gi|325002821|ref|ZP_08123933.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Pseudonocardia sp. P1] Length = 291 Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 72/263 (27%), Positives = 107/263 (40%), Gaps = 20/263 (7%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ V+G S +++ P ++D L + R E + ILG V + Sbjct: 28 DAELLAAHVSGRSRSTLLLTP--LVDPGVVEELKVLVKRRAAREPLQHILGTAVLGPVEV 85 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR--ILDLGTGTGAVCLALLKESPFFK 123 + F PRPETELL + L RDV R +LDL TG+GA+ LA P Sbjct: 86 AVGPGVFTPRPETELLFEWGLG------ALRDVRRPVVLDLCTGSGALALAFAVSRPDAA 139 Query: 124 GVGVDISCKALEIAKSNAVTN-GVSERFDTLQS------DWFSSVEGLFDVIVSNPPYIE 176 ++ AL + N + G R TL + D +EG D++V NPPY+ Sbjct: 140 VHALEADPAALVWTRRNLDAHVGRGGRPVTLHAADVRWPDLLVELEGRVDLVVCNPPYVP 199 Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236 + EV +DP ++ GG DG + + G + L G ++E V Sbjct: 200 DGT--PVPPEVERWDPPGAVFGGPDGTEIIQAVVRGATGWLRHGGALAIEHDDTHGDTVP 257 Query: 237 RIFESRK-LFLVNAFKDYGGNDR 258 + R+ L V D G R Sbjct: 258 ALLRRRRTLAEVTEHTDLTGRPR 280 >gi|319760622|ref|YP_004124560.1| uncharacterized adenine-specific methylase [Candidatus Blochmannia vafer str. BVAF] gi|318039336|gb|ADV33886.1| uncharacterized adenine-specific methylase [Candidatus Blochmannia vafer str. BVAF] Length = 298 Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 51/185 (27%), Positives = 91/185 (49%), Gaps = 9/185 (4%) Query: 60 FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL-LKE 118 F N+ +++ F PR L+ S LP K ILD+ TG+G + +A+ + Sbjct: 89 FCNLEFYVNNQVFIPRSPIGELIMSNFHDILPTPPKH----ILDMCTGSGCIAIAIAMIM 144 Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL--FDVIVSNPPYIE 176 P + VD+S KAL+IA+ N + + + S+ F ++ +D+IV NPPY+ Sbjct: 145 YPHSEIDAVDLSIKALQIAEYNIKLYNLENQIIPIHSNLFKNIPKFKKYDLIVINPPYVN 204 Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236 + C E +P +SL +GL I ++ +LN +G+ E+G N + ++ Sbjct: 205 KADI-CNLPEEYLHEPILSLSANCNGLEIIHQIFIQITDYLNTNGVLVCEVG-NTQNELK 262 Query: 237 RIFES 241 + +E+ Sbjct: 263 KYYEN 267 >gi|294660261|ref|NP_852920.2| HemK-like methylase [Mycoplasma gallisepticum str. R(low)] gi|284811918|gb|AAP56488.2| HemK-like methylase [Mycoplasma gallisepticum str. R(low)] gi|284930382|gb|ADC30321.1| HemK-like methylase [Mycoplasma gallisepticum str. R(high)] Length = 284 Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 55/192 (28%), Positives = 89/192 (46%), Gaps = 20/192 (10%) Query: 74 PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133 PR +T +++ L R +D+V +LD+ TGTG + L + K+ P ++ G DIS A Sbjct: 94 PRIDTNAVIEKFLEVINSR---KDIVNVLDICTGTGLIALTIKKQFPKYQVFGSDISKSA 150 Query: 134 LEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDF 190 ++IA NAV N + RF D L+ F V D ++ NPPY++ + E+ ++ Sbjct: 151 VKIANFNAVNNLLDARFYVADYLEV--FEQVSEEIDALIINPPYLDEELKSNYIKEI-NY 207 Query: 191 DPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAF 250 +P +L G Y I ++ + K + +E RI+E V Sbjct: 208 EPFNALFAKNGGTFFYEEIFRYLTTNKTKIKVLCMEFS-------ERIYEKT----VQLL 256 Query: 251 KDYGGNDRVLLF 262 K YG D+ F Sbjct: 257 KKYGLYDKTTFF 268 >gi|187731589|ref|YP_001881152.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Shigella boydii CDC 3083-94] gi|194432949|ref|ZP_03065233.1| ribosomal large subunit L3 protein glutamine methyltransferase [Shigella dysenteriae 1012] gi|312967630|ref|ZP_07781845.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Escherichia coli 2362-75] gi|187428581|gb|ACD07855.1| ribosomal large subunit L3 protein glutamine methyltransferase [Shigella boydii CDC 3083-94] gi|194418937|gb|EDX35022.1| ribosomal large subunit L3 protein glutamine methyltransferase [Shigella dysenteriae 1012] gi|312287827|gb|EFR15732.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Escherichia coli 2362-75] gi|320174687|gb|EFW49820.1| Ribosomal protein L3 methyltransferase [Shigella dysenteriae CDC 74-1112] gi|320183787|gb|EFW58621.1| Ribosomal protein L3 methyltransferase [Shigella flexneri CDC 796-83] gi|323187945|gb|EFZ73240.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Escherichia coli RN587/1] gi|332090094|gb|EGI95193.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Shigella dysenteriae 155-74] gi|332093472|gb|EGI98530.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Shigella boydii 3594-74] Length = 310 Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 43/130 (33%), Positives = 69/130 (53%), Gaps = 2/130 (1%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ILD+ TG+G + +A P + VDIS AL +A+ N +G+ ++SD F Sbjct: 135 HILDMCTGSGCIAIACAYAFPDAEVDAVDISPDALAVAEQNIEEHGLIHNVIPIRSDLFR 194 Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 + + +D+IV+NPPY+++ + L E R +P + L G DGL R I + +L Sbjct: 195 DLPKVQYDLIVTNPPYVDAEDMSDLPNEYR-HEPELGLASGTDGLKLTRRILGNAADYLA 253 Query: 219 KDGLCSVEIG 228 DG+ E+G Sbjct: 254 DDGVLICEVG 263 >gi|170681331|ref|YP_001744531.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli SMS-3-5] gi|218554885|ref|YP_002387798.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli IAI1] gi|218705860|ref|YP_002413379.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli UMN026] gi|293405796|ref|ZP_06649788.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli FVEC1412] gi|298381479|ref|ZP_06991078.1| adenine-specific DNA-methyltransferase [Escherichia coli FVEC1302] gi|300817463|ref|ZP_07097680.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Escherichia coli MS 107-1] gi|300936910|ref|ZP_07151797.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Escherichia coli MS 21-1] gi|301024163|ref|ZP_07187873.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Escherichia coli MS 69-1] gi|331653775|ref|ZP_08354776.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Escherichia coli M718] gi|331663848|ref|ZP_08364758.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Escherichia coli TA143] gi|170519049|gb|ACB17227.1| ribosomal large subunit L3 protein glutamine methyltransferase [Escherichia coli SMS-3-5] gi|218361653|emb|CAQ99249.1| N5-glutamine methyltransferase [Escherichia coli IAI1] gi|218432957|emb|CAR13851.1| N5-glutamine methyltransferase [Escherichia coli UMN026] gi|284922318|emb|CBG35403.1| putative methylase [Escherichia coli 042] gi|291428004|gb|EFF01031.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli FVEC1412] gi|298278921|gb|EFI20435.1| adenine-specific DNA-methyltransferase [Escherichia coli FVEC1302] gi|300396707|gb|EFJ80245.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Escherichia coli MS 69-1] gi|300458021|gb|EFK21514.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Escherichia coli MS 21-1] gi|300530089|gb|EFK51151.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Escherichia coli MS 107-1] gi|331048624|gb|EGI20700.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Escherichia coli M718] gi|331059647|gb|EGI31624.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Escherichia coli TA143] Length = 310 Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 43/130 (33%), Positives = 69/130 (53%), Gaps = 2/130 (1%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ILD+ TG+G + +A P + VDIS AL +A+ N +G+ ++SD F Sbjct: 135 HILDMCTGSGCIAIACAYAFPDAEVDAVDISPDALAVAEQNIEEHGLIHNVIPIRSDLFR 194 Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 + + +D+IV+NPPY+++ + L E R +P + L G DGL R I + +L Sbjct: 195 DLPKVQYDLIVTNPPYVDAEDMSDLPNEYR-HEPELGLASGTDGLKLTRRILGNAADYLA 253 Query: 219 KDGLCSVEIG 228 DG+ E+G Sbjct: 254 DDGVLICEVG 263 >gi|289643111|ref|ZP_06475241.1| modification methylase, HemK family [Frankia symbiont of Datisca glomerata] gi|289507075|gb|EFD28044.1| modification methylase, HemK family [Frankia symbiont of Datisca glomerata] Length = 375 Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 59/195 (30%), Positives = 81/195 (41%), Gaps = 27/195 (13%) Query: 34 QRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRI 93 +R L + R + ++G F + LT+ F PRPETE +V A R Sbjct: 101 ERELLHGLVARRAARVPLQHLVGTVGFRYLTLTVGPGVFVPRPETETVV--GWAIDTVRA 158 Query: 94 EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV----------- 142 D +DL TG+GA+ LAL E P + VD AL AK N V Sbjct: 159 AGWDRPVCVDLCTGSGAIALALADELPGARVYAVDSDPDALLWAKRNVVLTGRAITVHHA 218 Query: 143 ------TNGVSERFD--------TLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVR 188 + G + R ++ + + G D++VSNPPY+ L EV Sbjct: 219 DVGIDLSGGAASRHGGTPGAAGVMAATEVLADLLGRVDLVVSNPPYLCDDERGTLEPEVG 278 Query: 189 DFDPRISLDGGIDGL 203 D DP +L GG DGL Sbjct: 279 DHDPPAALWGGPDGL 293 >gi|193069730|ref|ZP_03050681.1| ribosomal large subunit L3 protein glutamine methyltransferase [Escherichia coli E110019] gi|192956932|gb|EDV87384.1| ribosomal large subunit L3 protein glutamine methyltransferase [Escherichia coli E110019] Length = 310 Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 43/130 (33%), Positives = 69/130 (53%), Gaps = 2/130 (1%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ILD+ TG+G + +A P + VDIS AL +A+ N +G+ ++SD F Sbjct: 135 HILDMCTGSGCIAIACAYAFPESEVDAVDISPDALAVAEQNIEEHGLIHNVIPIRSDLFR 194 Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 + + +D+IV+NPPY+++ + L E R +P + L G DGL R I + +L Sbjct: 195 DLPKVQYDLIVTNPPYVDAEDMSDLPNEYR-HEPELGLASGTDGLKLTRRILGNAADYLA 253 Query: 219 KDGLCSVEIG 228 DG+ E+G Sbjct: 254 DDGVLICEVG 263 >gi|89109150|ref|AP_002930.1| N5-glutamine methyltransferase [Escherichia coli str. K-12 substr. W3110] gi|90111419|ref|NP_416833.4| N5-glutamine methyltransferase [Escherichia coli str. K-12 substr. MG1655] gi|157161819|ref|YP_001459137.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli HS] gi|170081946|ref|YP_001731266.1| ribosomal protein L3 N5-glutamine methyltransferase [Escherichia coli str. K-12 substr. DH10B] gi|188493483|ref|ZP_03000753.1| methyltransferase, HemK family [Escherichia coli 53638] gi|238901505|ref|YP_002927301.1| N5-glutamine methyltransferase [Escherichia coli BW2952] gi|256021985|ref|ZP_05435850.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia sp. 4_1_40B] gi|300948520|ref|ZP_07162614.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Escherichia coli MS 116-1] gi|300956401|ref|ZP_07168692.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Escherichia coli MS 175-1] gi|301023578|ref|ZP_07187342.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Escherichia coli MS 196-1] gi|307138995|ref|ZP_07498351.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli H736] gi|331642972|ref|ZP_08344107.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Escherichia coli H736] gi|331658505|ref|ZP_08359449.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Escherichia coli TA206] gi|19859177|sp|P39199|YFCB_ECOLI RecName: Full=Uncharacterized adenine-specific methylase yfcB gi|85675359|dbj|BAA16188.2| N5-glutamine methyltransferase [Escherichia coli str. K12 substr. W3110] gi|87082085|gb|AAC75390.2| N5-glutamine methyltransferase [Escherichia coli str. K-12 substr. MG1655] gi|157067499|gb|ABV06754.1| ribosomal large subunit L3 protein glutamine methyltransferase [Escherichia coli HS] gi|169889781|gb|ACB03488.1| ribosomal protein L3 N5-glutamine methyltransferase [Escherichia coli str. K-12 substr. DH10B] gi|188488682|gb|EDU63785.1| methyltransferase, HemK family [Escherichia coli 53638] gi|238861843|gb|ACR63841.1| N5-glutamine methyltransferase [Escherichia coli BW2952] gi|260448576|gb|ACX38998.1| modification methylase, HemK family [Escherichia coli DH1] gi|299880813|gb|EFI89024.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Escherichia coli MS 196-1] gi|300316750|gb|EFJ66534.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Escherichia coli MS 175-1] gi|300451930|gb|EFK15550.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Escherichia coli MS 116-1] gi|309702641|emb|CBJ01970.1| putative methylase [Escherichia coli ETEC H10407] gi|315136965|dbj|BAJ44124.1| adenine-specific DNA-methyltransferase [Escherichia coli DH1] gi|315298134|gb|EFU57398.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Escherichia coli MS 16-3] gi|315615599|gb|EFU96231.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Escherichia coli 3431] gi|331039770|gb|EGI11990.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Escherichia coli H736] gi|331054170|gb|EGI26197.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Escherichia coli TA206] Length = 310 Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 43/130 (33%), Positives = 69/130 (53%), Gaps = 2/130 (1%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ILD+ TG+G + +A P + VDIS AL +A+ N +G+ ++SD F Sbjct: 135 HILDMCTGSGCIAIACAYAFPDAEVDAVDISPDALAVAEQNIEEHGLIHNVIPIRSDLFR 194 Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 + + +D+IV+NPPY+++ + L E R +P + L G DGL R I + +L Sbjct: 195 DLPKVQYDLIVTNPPYVDAEDMSDLPNEYR-HEPELGLASGTDGLKLTRRILGNAADYLA 253 Query: 219 KDGLCSVEIG 228 DG+ E+G Sbjct: 254 DDGVLICEVG 263 >gi|320178695|gb|EFW53658.1| Ribosomal protein L3 methyltransferase [Shigella boydii ATCC 9905] Length = 310 Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 43/130 (33%), Positives = 69/130 (53%), Gaps = 2/130 (1%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ILD+ TG+G + +A P + VDIS AL +A+ N +G+ ++SD F Sbjct: 135 HILDMCTGSGCIAIACAYAFPDAEVDAVDISPDALAVAEQNIEEHGLIHNVIPIRSDLFR 194 Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 + + +D+IV+NPPY+++ + L E R +P + L G DGL R I + +L Sbjct: 195 DLPKVQYDLIVTNPPYVDAEDMSDLPNEYR-HEPELGLASGTDGLKLTRRILGNAADYLA 253 Query: 219 KDGLCSVEIG 228 DG+ E+G Sbjct: 254 DDGVLICEVG 263 >gi|301647566|ref|ZP_07247363.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Escherichia coli MS 146-1] gi|301074256|gb|EFK89062.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Escherichia coli MS 146-1] Length = 310 Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 43/130 (33%), Positives = 69/130 (53%), Gaps = 2/130 (1%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ILD+ TG+G + +A P + VDIS AL +A+ N +G+ ++SD F Sbjct: 135 HILDMCTGSGCIAIACAYAFPDAEVDAVDISPDALAVAEQNIEEHGLIHNVIPIRSDLFR 194 Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 + + +D+IV+NPPY+++ + L E R +P + L G DGL R I + +L Sbjct: 195 DLPKVQYDLIVTNPPYVDAEDMSDLPNEYR-HEPELGLASGTDGLKLTRRILGNAADYLA 253 Query: 219 KDGLCSVEIG 228 DG+ E+G Sbjct: 254 DDGVLICEVG 263 >gi|157415009|ref|YP_001482265.1| modification methylase, HemK family [Campylobacter jejuni subsp. jejuni 81116] gi|157385973|gb|ABV52288.1| putative DNA methylase [Campylobacter jejuni subsp. jejuni 81116] gi|307747647|gb|ADN90917.1| Putative DNA methylase [Campylobacter jejuni subsp. jejuni M1] gi|315931924|gb|EFV10879.1| methyltransferase, HemK family protein [Campylobacter jejuni subsp. jejuni 327] Length = 271 Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 69/254 (27%), Positives = 114/254 (44%), Gaps = 21/254 (8%) Query: 11 LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70 LC + ++ D +D F L I R E I DF+ + + Sbjct: 25 LCEYLKKDKAWLFLNQDIQIDHEPYFEL---IKRFKSGEPFEYIFEKVDFWGLEFKIKKG 81 Query: 71 TFEPRPETELLVDSALAFSLPRIEKRDVVR-ILDLGTGTGAVCLALLKESPFFKGVGVDI 129 PR ++E+L+ F + + K++ IL++G G+G + + L KE K DI Sbjct: 82 VLIPRYDSEILL-----FQILNLCKKNTFNGILEIGFGSGILSIVLAKELGL-KITACDI 135 Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE-SVIVDCLGLEVR 188 + KALE+A NA + V D + F ++ +D I SNPPYI+ S +D + Sbjct: 136 NPKALELALENAKLHKVDHLIDFKLCN-FKQIKENYDFIFSNPPYIKNSYPIDIWVQK-- 192 Query: 189 DFDPRISLDGGIDGLSHYRTIADGVSRHLNKD-GLCSVEIGYNQKVDVVRIFESRKLFLV 247 +P+ +L GG G Y + + + L+K + E GY+QK + +I F+V Sbjct: 193 --EPKEALFGGEKG---YEILEEIIHFSLDKKVKFLACEFGYDQKEILEKILYQNN-FIV 246 Query: 248 NAFKDYGGNDRVLL 261 + FKD +R + Sbjct: 247 DFFKDEQDYNRAFI 260 >gi|261340723|ref|ZP_05968581.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Enterobacter cancerogenus ATCC 35316] gi|288317140|gb|EFC56078.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Enterobacter cancerogenus ATCC 35316] Length = 310 Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 45/141 (31%), Positives = 72/141 (51%), Gaps = 3/141 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ILD+ TG+G + +A P + VDIS AL + + N +G+ ++SD F Sbjct: 135 HILDMCTGSGCIAIACAYAFPEAEVDAVDISTDALAVTEHNIEEHGLIHHVTPIRSDLFR 194 Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 + L +D+IV+NPPY+++ + L E R +P + L G DGL R I +L Sbjct: 195 DLPTLQYDLIVTNPPYVDAEDMSDLPNEYR-HEPELGLASGSDGLKLTRRILACAPDYLT 253 Query: 219 KDGLCSVEIGYNQKVDVVRIF 239 DG+ E+G N V ++ + Sbjct: 254 DDGVLICEVG-NSMVHLIEQY 273 >gi|311895758|dbj|BAJ28166.1| putative HemK homolog [Kitasatospora setae KM-6054] Length = 272 Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 55/187 (29%), Positives = 87/187 (46%), Gaps = 15/187 (8%) Query: 50 SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109 + +++G+ +F +R+ L+ F PR +E LV+ A A P D V +LDL G+G Sbjct: 62 PLEQVVGFAEFAGLRVALAPGVFVPRRRSEFLVERAAALGRP-----DAV-LLDLCCGSG 115 Query: 110 AVCLALLKESPFFKGVGVDI-----SCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL 164 A+ AL G GV++ A+ A+ N G L + + G Sbjct: 116 AIGAALAAR----LGPGVELHAADVDPAAVACARRNLARYGGRVHLGDLDAPLPPGLLGR 171 Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224 D++++N PY+ + + L E RD +P +LDGG DGL+ R +A R L G Sbjct: 172 VDLLLANAPYVPTGEIPLLPPEARDHEPATALDGGADGLAVQRRVAAAAPRWLAPGGRLL 231 Query: 225 VEIGYNQ 231 +E Q Sbjct: 232 IETSGRQ 238 >gi|108808088|ref|YP_652004.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Yersinia pestis Antiqua] gi|108812358|ref|YP_648125.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Yersinia pestis Nepal516] gi|145599288|ref|YP_001163364.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Yersinia pestis Pestoides F] gi|149365224|ref|ZP_01887259.1| ribosomal protein L3 N5-glutamine methyltransferase [Yersinia pestis CA88-4125] gi|153947313|ref|YP_001400383.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Yersinia pseudotuberculosis IP 31758] gi|162420900|ref|YP_001604986.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Yersinia pestis Angola] gi|165925296|ref|ZP_02221128.1| methyltransferase, HemK family [Yersinia pestis biovar Orientalis str. F1991016] gi|165937109|ref|ZP_02225674.1| methyltransferase, HemK family [Yersinia pestis biovar Orientalis str. IP275] gi|166008087|ref|ZP_02228985.1| methyltransferase, HemK family [Yersinia pestis biovar Antiqua str. E1979001] gi|166214242|ref|ZP_02240277.1| methyltransferase, HemK family [Yersinia pestis biovar Antiqua str. B42003004] gi|167398823|ref|ZP_02304347.1| methyltransferase, HemK family [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167421362|ref|ZP_02313115.1| methyltransferase, HemK family [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167424480|ref|ZP_02316233.1| methyltransferase, HemK family [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167469289|ref|ZP_02333993.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Yersinia pestis FV-1] gi|170023754|ref|YP_001720259.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Yersinia pseudotuberculosis YPIII] gi|186896033|ref|YP_001873145.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Yersinia pseudotuberculosis PB1/+] gi|218929822|ref|YP_002347697.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Yersinia pestis CO92] gi|229838317|ref|ZP_04458476.1| ribosomal protein L3 N5-glutamine methyltransferase [Yersinia pestis biovar Orientalis str. PEXU2] gi|229895347|ref|ZP_04510520.1| ribosomal protein L3 N5-glutamine methyltransferase [Yersinia pestis Pestoides A] gi|229898882|ref|ZP_04514027.1| ribosomal protein L3 N5-glutamine methyltransferase [Yersinia pestis biovar Orientalis str. India 195] gi|229902717|ref|ZP_04517834.1| ribosomal protein L3 N5-glutamine methyltransferase [Yersinia pestis Nepal516] gi|270490110|ref|ZP_06207184.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Yersinia pestis KIM D27] gi|294504663|ref|YP_003568725.1| hypothetical protein YPZ3_2553 [Yersinia pestis Z176003] gi|108776006|gb|ABG18525.1| hypothetical protein YPN_2196 [Yersinia pestis Nepal516] gi|108780001|gb|ABG14059.1| hypothetical protein YPA_2093 [Yersinia pestis Antiqua] gi|115348433|emb|CAL21369.1| conserved hypothetical protein [Yersinia pestis CO92] gi|145210984|gb|ABP40391.1| hypothetical protein YPDSF_2010 [Yersinia pestis Pestoides F] gi|149291637|gb|EDM41711.1| ribosomal protein L3 N5-glutamine methyltransferase [Yersinia pestis CA88-4125] gi|152958808|gb|ABS46269.1| methyltransferase, HemK family [Yersinia pseudotuberculosis IP 31758] gi|162353715|gb|ABX87663.1| methyltransferase, HemK family [Yersinia pestis Angola] gi|165914972|gb|EDR33584.1| methyltransferase, HemK family [Yersinia pestis biovar Orientalis str. IP275] gi|165922903|gb|EDR40054.1| methyltransferase, HemK family [Yersinia pestis biovar Orientalis str. F1991016] gi|165992469|gb|EDR44770.1| methyltransferase, HemK family [Yersinia pestis biovar Antiqua str. E1979001] gi|166204598|gb|EDR49078.1| methyltransferase, HemK family [Yersinia pestis biovar Antiqua str. B42003004] gi|166960851|gb|EDR56872.1| methyltransferase, HemK family [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167051327|gb|EDR62735.1| methyltransferase, HemK family [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167056362|gb|EDR66131.1| methyltransferase, HemK family [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169750288|gb|ACA67806.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Yersinia pseudotuberculosis YPIII] gi|186699059|gb|ACC89688.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Yersinia pseudotuberculosis PB1/+] gi|229680164|gb|EEO76263.1| ribosomal protein L3 N5-glutamine methyltransferase [Yersinia pestis Nepal516] gi|229688430|gb|EEO80501.1| ribosomal protein L3 N5-glutamine methyltransferase [Yersinia pestis biovar Orientalis str. India 195] gi|229694683|gb|EEO84730.1| ribosomal protein L3 N5-glutamine methyltransferase [Yersinia pestis biovar Orientalis str. PEXU2] gi|229701655|gb|EEO89681.1| ribosomal protein L3 N5-glutamine methyltransferase [Yersinia pestis Pestoides A] gi|262362725|gb|ACY59446.1| hypothetical protein YPD4_2539 [Yersinia pestis D106004] gi|270338614|gb|EFA49391.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Yersinia pestis KIM D27] gi|294355122|gb|ADE65463.1| hypothetical protein YPZ3_2553 [Yersinia pestis Z176003] gi|320014548|gb|ADV98119.1| ribosomal protein L3 N5-glutamine methyltransferase [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 310 Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 42/130 (32%), Positives = 67/130 (51%), Gaps = 2/130 (1%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ILD+ TG+G + +A P + VDIS L + + N +G+ + ++SD F Sbjct: 135 HILDMCTGSGCIAIACAYAFPDAEVDAVDISNDVLAVTEHNIQQHGMEHQVTPIRSDLFR 194 Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 + + +D+IV+NPPY+++ + L E R F+P + L G DGL R I L Sbjct: 195 DLPPIKYDLIVTNPPYVDAEDMADLPQEFR-FEPELGLAAGSDGLKLARRILACAPDFLQ 253 Query: 219 KDGLCSVEIG 228 DG+ E+G Sbjct: 254 DDGVLICEVG 263 >gi|86151737|ref|ZP_01069951.1| modification methylase, HemK family [Campylobacter jejuni subsp. jejuni 260.94] gi|86153286|ref|ZP_01071490.1| methylase of polypeptide chain release factor [Campylobacter jejuni subsp. jejuni HB93-13] gi|121613646|ref|YP_001000418.1| HemK family modification methylase [Campylobacter jejuni subsp. jejuni 81-176] gi|167005360|ref|ZP_02271118.1| modification methylase, HemK family protein [Campylobacter jejuni subsp. jejuni 81-176] gi|315124222|ref|YP_004066226.1| modification methylase, HemK family [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|85841366|gb|EAQ58614.1| modification methylase, HemK family [Campylobacter jejuni subsp. jejuni 260.94] gi|85843012|gb|EAQ60223.1| methylase of polypeptide chain release factor [Campylobacter jejuni subsp. jejuni HB93-13] gi|87249539|gb|EAQ72499.1| modification methylase, HemK family [Campylobacter jejuni subsp. jejuni 81-176] gi|315017944|gb|ADT66037.1| modification methylase, HemK family [Campylobacter jejuni subsp. jejuni ICDCCJ07001] Length = 271 Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 68/255 (26%), Positives = 115/255 (45%), Gaps = 23/255 (9%) Query: 11 LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKH-ESIHRILGWRDFYNVRLTLSS 69 LC + ++ D +D F ++R K E I DF+ + + Sbjct: 25 LCEYLKKDKAWLFLNQDIQIDHEPYF----ELIRRFKSGEPFEYIFEKVDFWGLEFKIKK 80 Query: 70 DTFEPRPETELLVDSALAFSLPRIEKRDVVR-ILDLGTGTGAVCLALLKESPFFKGVGVD 128 PR ++E+L+ F + + K++ IL++G G+G + + L KE K D Sbjct: 81 GVLIPRYDSEILL-----FQILNLCKKNTFNGILEIGFGSGILSIVLAKELGL-KITACD 134 Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE-SVIVDCLGLEV 187 I+ KALE+A NA + V D + F ++ +D I SNPPYI+ S +D + Sbjct: 135 INPKALELALENAKLHKVDHLIDFKLCN-FKQIKENYDFIFSNPPYIKNSYPIDIWVQK- 192 Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD-GLCSVEIGYNQKVDVVRIFESRKLFL 246 +P+ +L GG G Y + + + L+K + E GY+QK + +I F+ Sbjct: 193 ---EPKEALFGGEKG---YEILEEIIHFSLDKKVKFLACEFGYDQKEILEKILYQNN-FI 245 Query: 247 VNAFKDYGGNDRVLL 261 V+ FKD +R + Sbjct: 246 VDFFKDEQDYNRAFI 260 >gi|206577308|ref|YP_002237272.1| ribosomal large subunit L3 protein glutamine methyltransferase [Klebsiella pneumoniae 342] gi|238895851|ref|YP_002920587.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Klebsiella pneumoniae NTUH-K2044] gi|288934208|ref|YP_003438267.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Klebsiella variicola At-22] gi|206566366|gb|ACI08142.1| ribosomal large subunit L3 protein glutamine methyltransferase [Klebsiella pneumoniae 342] gi|238548169|dbj|BAH64520.1| putative adenine-specific methylase [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|288888937|gb|ADC57255.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Klebsiella variicola At-22] Length = 310 Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 43/130 (33%), Positives = 69/130 (53%), Gaps = 2/130 (1%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ILD+ TG+G + +A P + VDIS AL +A+ N ++G+ ++SD F Sbjct: 135 HILDMCTGSGCIAIACAYAFPEAEVDAVDISPDALAVAEHNVESHGLIHHVTPIRSDLFR 194 Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 + L +D+IV+NPPY++ + L E + +P + L G DGL R I +L+ Sbjct: 195 DLPKLQYDLIVTNPPYVDEEDMADLP-EEYEHEPVLGLASGSDGLKLTRRILGNAPDYLS 253 Query: 219 KDGLCSVEIG 228 DG+ E+G Sbjct: 254 DDGILICEVG 263 >gi|290508411|ref|ZP_06547782.1| protein-(glutamine-N5) methyltransferase, 50S ribosomal protein L3-specific [Klebsiella sp. 1_1_55] gi|289777805|gb|EFD85802.1| protein-(glutamine-N5) methyltransferase, 50S ribosomal protein L3-specific [Klebsiella sp. 1_1_55] Length = 334 Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 43/130 (33%), Positives = 69/130 (53%), Gaps = 2/130 (1%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ILD+ TG+G + +A P + VDIS AL +A+ N ++G+ ++SD F Sbjct: 159 HILDMCTGSGCIAIACAYAFPEAEVDAVDISPDALAVAEHNVESHGLIHHVTPIRSDLFR 218 Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 + L +D+IV+NPPY++ + L E + +P + L G DGL R I +L+ Sbjct: 219 DLPKLQYDLIVTNPPYVDEEDMADLP-EEYEHEPVLGLASGSDGLKLTRRILGNAPDYLS 277 Query: 219 KDGLCSVEIG 228 DG+ E+G Sbjct: 278 DDGILICEVG 287 >gi|152971258|ref|YP_001336367.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|262043379|ref|ZP_06016505.1| protein-(glutamine-N5) methyltransferase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|329997371|ref|ZP_08302754.1| (glutamine-N5) methyltransferase, ribosomal protein L3-specific [Klebsiella sp. MS 92-3] gi|150956107|gb|ABR78137.1| putative adenine-specific methylase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|259039260|gb|EEW40405.1| protein-(glutamine-N5) methyltransferase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|328539120|gb|EGF65156.1| (glutamine-N5) methyltransferase, ribosomal protein L3-specific [Klebsiella sp. MS 92-3] Length = 334 Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 43/130 (33%), Positives = 69/130 (53%), Gaps = 2/130 (1%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ILD+ TG+G + +A P + VDIS AL +A+ N ++G+ ++SD F Sbjct: 159 HILDMCTGSGCIAIACAYAFPEAEVDAVDISPDALAVAEHNVESHGLIHHVTPIRSDLFR 218 Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 + L +D+IV+NPPY++ + L E + +P + L G DGL R I +L+ Sbjct: 219 DLPKLQYDLIVTNPPYVDEEDMADLP-EEYEHEPVLGLASGSDGLKLTRRILGNAPDYLS 277 Query: 219 KDGLCSVEIG 228 DG+ E+G Sbjct: 278 DDGILICEVG 287 >gi|134100236|ref|YP_001105897.1| HemK family modification methylase [Saccharopolyspora erythraea NRRL 2338] gi|291006541|ref|ZP_06564514.1| HemK family modification methylase [Saccharopolyspora erythraea NRRL 2338] gi|133912859|emb|CAM02972.1| modification methylase, HemK family [Saccharopolyspora erythraea NRRL 2338] Length = 274 Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 57/207 (27%), Positives = 85/207 (41%), Gaps = 6/207 (2%) Query: 38 LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97 L + R + +LGW +F + R+ + F PR T+ L A + P Sbjct: 42 LDEMVARRAAGLPLEHVLGWAEFCHQRIAVDPGVFVPRRRTQHLARQAADLTRPH----- 96 Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 ++DL GTGAV AL P + DI A+ A+ N G L Sbjct: 97 -AVVVDLCCGTGAVGAALAAAHPGTELHAADIDPAAVRCARRNLEPAGGQVHHGDLYEPL 155 Query: 158 FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217 +++ G D++V+N PY+ + +D L E R +PR +LDGG DGL R + L Sbjct: 156 PTALRGRIDILVANTPYVPTDALDLLPPEARIHEPRHALDGGGDGLDVQRRVTAQAPAWL 215 Query: 218 NKDGLCSVEIGYNQKVDVVRIFESRKL 244 G +E Q + F L Sbjct: 216 APGGHLLIETSTEQAPEAAATFARHGL 242 >gi|168308159|ref|ZP_02690834.1| methyltransferase, HemK family [Ureaplasma parvum serovar 1 str. ATCC 27813] gi|171902800|gb|EDT49089.1| methyltransferase, HemK family [Ureaplasma parvum serovar 1 str. ATCC 27813] Length = 290 Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 60/215 (27%), Positives = 100/215 (46%), Gaps = 11/215 (5%) Query: 53 RILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVC 112 RILG+ F R + + F R ETELL+D + + + + ++D+ G+G + Sbjct: 72 RILGYGYFCAKRFYVDKNVFAFRVETELLID--VVNKVIQQSTYKIKNVIDVCCGSGVLG 129 Query: 113 LALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE--RFDTLQSDWFSSVEGLFDVIVS 170 L+ +DIS A+ K NA + ++ ++F + + FD+I+ Sbjct: 130 LSTKMNFNQLNVSLLDISIDAINNCKKNAKYHNLTNVNFIHKSMQEYFLNTKKRFDLIIC 189 Query: 171 NPPYIESVIVDCLGLEVRDFDP---RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227 NPPYI+S L EV D+DP I D DG+S Y I + + N+ EI Sbjct: 190 NPPYIKSNYE--LNREVLDYDPINALIDFDHK-DGISFYLFIINNIKSIANEKFTIIFEI 246 Query: 228 GYNQKVDVVRIFESRKLFLVNAF-KDYGGNDRVLL 261 G++QK + ++ + + L F DY R+L+ Sbjct: 247 GFDQKEILEKVIKKNEFPLFYYFINDYNNLCRILI 281 >gi|322491043|emb|CBZ26307.1| conserved hypothetical protein [Leishmania mexicana MHOM/GT/2001/U1103] Length = 514 Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 47/167 (28%), Positives = 75/167 (44%), Gaps = 39/167 (23%) Query: 48 HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR----------D 97 H+ + I+G + F+ + + PRPETE+ + L R E+ Sbjct: 243 HKPLSYIIGSQPFFGCDIHCEAPLLCPRPETEMWTHWMVYSYLARAERSITATDLSPAVS 302 Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSD 156 +RILD+ GTG + +AL K +DI +A+ +++ NA+ NG+S ER+ ++SD Sbjct: 303 PMRILDVCCGTGCIGVALAKHLSSAVVTALDILPEAVRVSRENAMRNGISPERYTAMESD 362 Query: 157 WFS----------------------------SVEGLFDVIVSNPPYI 175 FS + G +DVIVSNPPY+ Sbjct: 363 MFSCFLEEPVPAQQGDSAHLSEDRPLGTVNDAYAGTYDVIVSNPPYV 409 >gi|238920643|ref|YP_002934158.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Edwardsiella ictaluri 93-146] gi|238870212|gb|ACR69923.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Edwardsiella ictaluri 93-146] Length = 310 Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 42/129 (32%), Positives = 68/129 (52%), Gaps = 2/129 (1%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 ILD+ TG+G + +A P + VDIS L + + N +G+ ++ ++SD F Sbjct: 136 ILDMCTGSGCIAIACAYAFPQAEVDAVDISSDVLAVTEHNIQQHGLEQQVTPIRSDLFRE 195 Query: 161 VEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 + L +D+IV+NPPY++ + L E R +P + L G DGL R I +L+ Sbjct: 196 LPPLRYDLIVTNPPYVDEEDMSDLPDEFR-HEPALGLAAGSDGLKLVRRILACAPDYLSD 254 Query: 220 DGLCSVEIG 228 DG+ E+G Sbjct: 255 DGVLICEVG 263 >gi|93006460|ref|YP_580897.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Psychrobacter cryohalolentis K5] gi|92394138|gb|ABE75413.1| modification methylase, HemK family [Psychrobacter cryohalolentis K5] Length = 391 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 44/133 (33%), Positives = 73/133 (54%), Gaps = 7/133 (5%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 RILDL TG+G C+A+ + F + VDI ALE+A N + + + + ++SD Sbjct: 209 RILDLCTGSG--CIAIALATRFVDALVDAVDIDKGALEVAMVNVDHHDLGHQVNVIESDL 266 Query: 158 FSSV--EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215 F+ + E +++IV+NPPY+++ I+ L E ++P +L G DGL I Sbjct: 267 FAKIPAENQYELIVTNPPYVDAAIMADLPPEFL-YEPEHALAAGQDGLDLVHRILFEAPD 325 Query: 216 HLNKDGLCSVEIG 228 +L+ +GL E+G Sbjct: 326 YLSPEGLLVCEVG 338 >gi|237752964|ref|ZP_04583444.1| protoporphyrinogen oxidase [Helicobacter winghamensis ATCC BAA-430] gi|229375231|gb|EEO25322.1| protoporphyrinogen oxidase [Helicobacter winghamensis ATCC BAA-430] Length = 285 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 67/227 (29%), Positives = 100/227 (44%), Gaps = 25/227 (11%) Query: 44 RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103 R + +E I ++ FY L +S PRPETE+L++ L I +D I + Sbjct: 66 RRVNYEPIEYLIEKVSFYGEELYVSYGALIPRPETEILLEKTLEL----IVSKDCKNIAE 121 Query: 104 LGTGTGAVCLAL------LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 +G G+GA+ + L LK DIS +AL NA N + L Sbjct: 122 IGVGSGAISVLLAYLSKGLKSDSNLSFHASDISPEAL----FNACVNREKFKVKNLSLHL 177 Query: 158 -----FSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIAD 211 F+ G+ FD++VSNPPYI+ + L ++P+ +L GG+ G I D Sbjct: 178 SAYLDFNVKLGINFDILVSNPPYIKEGEMLPKSL---SYEPQKALFGGVRGDEMLLNIID 234 Query: 212 GVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258 + LC E+GY+QK V ++ V +KD G DR Sbjct: 235 LAQKFKIPYLLC--EMGYDQKESVKAHLKNTPHKSVEFYKDLAGLDR 279 >gi|89898159|ref|YP_515269.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Chlamydophila felis Fe/C-56] gi|89331531|dbj|BAE81124.1| tRNA/rRNA methyltransferase [Chlamydophila felis Fe/C-56] Length = 283 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 76/262 (29%), Positives = 118/262 (45%), Gaps = 16/262 (6%) Query: 5 RDSHSFLCRVTGLSSH----QVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60 R++ L G+SS V++D DS+ +R A V + IH G F Sbjct: 24 REASDILMDFLGISSRAQLASVVLDADSLETYWKRVQQRAARVPT---SYIH---GSVSF 77 Query: 61 YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120 + L + S PR ETELL + + + + + D+ G+G + L++ K P Sbjct: 78 LGLHLDVDSRVLIPRMETELLAERIIKY---LTQHPHIRTFYDVCCGSGCLGLSVKKYCP 134 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180 + V DI KA+ +AK+NA N + + + L D FS D V NPPY+ + Sbjct: 135 EIQVVLSDICPKAVAVAKANASINNL--KVEILLGDLFSPYSYPADAFVCNPPYLSFSEI 192 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 + EVR +P +L GG G+ Y IA + L G+ +EIGY Q + +IF Sbjct: 193 MYVDPEVRCHEPWKALVGGSSGVEFYERIAQDLDLVLCPGGVGWLEIGYRQGELIKKIFA 252 Query: 241 SRKLFLVNAFKDYGGNDRVLLF 262 R + ++D G DR+ Sbjct: 253 GRGVS-GTIYQDLSGCDRIFFL 273 >gi|300897013|ref|ZP_07115492.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Escherichia coli MS 198-1] gi|300359194|gb|EFJ75064.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Escherichia coli MS 198-1] Length = 311 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 43/130 (33%), Positives = 69/130 (53%), Gaps = 2/130 (1%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ILD+ TG+G + +A P + VDIS AL +A+ N +G+ ++SD F Sbjct: 135 HILDMCTGSGCIAIACAYAFPDAEVDAVDISPDALAVAEQNIEEHGLIHNVIPIRSDLFR 194 Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 + + +D+IV+NPPY+++ + L E R +P + L G DGL R I + +L Sbjct: 195 DLPKVQYDLIVTNPPYVDAEDMSDLPNEYR-HEPELGLASGTDGLKLTRRILGNAADYLA 253 Query: 219 KDGLCSVEIG 228 DG+ E+G Sbjct: 254 DDGVLICEVG 263 >gi|59712413|ref|YP_205189.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Vibrio fischeri ES114] gi|197335265|ref|YP_002156633.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Vibrio fischeri MJ11] gi|59480514|gb|AAW86301.1| N5-glutamine methyltransferase [Vibrio fischeri ES114] gi|197316755|gb|ACH66202.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Vibrio fischeri MJ11] Length = 310 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 40/131 (30%), Positives = 68/131 (51%), Gaps = 2/131 (1%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 RI+DL TG+G + +A P + +DIS AL +A+ N +G+ ++ ++SD Sbjct: 134 TRIMDLCTGSGCIAIACAHAFPNAEVDAIDISTDALMVAEQNVQDHGMEQQVFPIRSDLL 193 Query: 159 SSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217 + + ++ IVSNPPY++ ++ L E + +P + L G DGL R I +L Sbjct: 194 RDIPKDQYNFIVSNPPYVDEEDMNSLPEEF-EHEPELGLAAGTDGLKLVRRILANAPDYL 252 Query: 218 NKDGLCSVEIG 228 +G E+G Sbjct: 253 MDNGFLICEVG 263 >gi|19115895|ref|NP_594983.1| mitochondrial S-adenosylmethionine-dependent methyltransferase (possibly N(5)-glutamine) [Schizosaccharomyces pombe 972h-] gi|74581943|sp|O14028|MTQ1_SCHPO RecName: Full=Probable mitochondrial N(5)-glutamine methyltransferase mtq1 gi|2408047|emb|CAB16250.1| mitochondrial S-adenosylmethionine-dependent methyltransferase (possibly N(5)-glutamine) [Schizosaccharomyces pombe] Length = 309 Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 64/248 (25%), Positives = 110/248 (44%), Gaps = 19/248 (7%) Query: 35 RFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIE 94 R + NA ++ + IL + F N+++ PR ETE V+ + L R+E Sbjct: 55 RKKIVNACQLRARNYPLQYILKSQPFGNIKIDCQQGVLIPRWETEEWVERVVD-KLNRLE 113 Query: 95 KRDVVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSN---AVTNGVSERF 150 + ++ILDL TG+G + +L + VD+S KAL++A N A+ +G + Sbjct: 114 RLKPLKILDLCTGSGCISSFVLANLRVPHTIEAVDVSKKALKLAVKNCDRAIAHGTVGKI 173 Query: 151 DTLQSDWFSS---VEGLFD---VIVSNPPYI-ESVIVDCLGLEVRDFDPRISLDGGIDGL 203 + Q D + VE L V++ NPPYI + + VR ++P+++L G Sbjct: 174 NFHQIDVLNEHERVESLLQTSHVLLCNPPYISDDDFAAQTDISVRKYEPKLALLAKNGGN 233 Query: 204 SHYRTIADGVSRHLNKDG-------LCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGN 256 Y + + R L ++ L EIG + +V+ + N +D Sbjct: 234 EFYYKFSQYIKRMLQRNAKDFVPLSLIVFEIGSTHQAKIVKSLFDDTNWQANIEQDGAHQ 293 Query: 257 DRVLLFCR 264 DRV++ R Sbjct: 294 DRVVIITR 301 >gi|213420560|ref|ZP_03353626.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 191 Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 43/129 (33%), Positives = 69/129 (53%), Gaps = 2/129 (1%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 ILD+ TG+G + +A P + VDIS AL +A+ N +G+ ++SD F Sbjct: 27 ILDMCTGSGCIAIACAYAFPDAEVDAVDISPDALAVAEHNIEEHGLIHHVTPIRSDLFRD 86 Query: 161 VEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 + + +D+IV+NPPY+++ + L E R +P + L G DGL R I +L+ Sbjct: 87 LPKVQYDLIVTNPPYVDAEDMSDLPNEYR-HEPELGLASGTDGLKLTRRILGNAPDYLSD 145 Query: 220 DGLCSVEIG 228 DG+ E+G Sbjct: 146 DGVLICEVG 154 >gi|315657281|ref|ZP_07910163.1| HemK family modification methylase [Mobiluncus curtisii subsp. holmesii ATCC 35242] gi|315491753|gb|EFU81362.1| HemK family modification methylase [Mobiluncus curtisii subsp. holmesii ATCC 35242] Length = 290 Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 63/237 (26%), Positives = 99/237 (41%), Gaps = 16/237 (6%) Query: 34 QRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRI 93 QRFF + + + ++G F ++ L F RPETE + A+ + + Sbjct: 56 QRFF--ELVGQRATRVPLQHVMGIMYFRHLTLHARPGVFVVRPETEWVAQGAIDAAADWV 113 Query: 94 EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF--- 150 + R+LDLG G+GA+ L++ E VD+S A+E+ NA GV+ R Sbjct: 114 RQGVAPRVLDLGCGSGALGLSIASEVHQSVLTCVDVSEAAVELTAENARFTGVAARVLLT 173 Query: 151 -----DTLQSDWFSS-VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL-DGGIDGL 203 TL++ + + F VI +NPPY +VD + DP+++L GG DGL Sbjct: 174 DATDPQTLRNALVQAEIPPQFHVIATNPPY----VVDPVTQPEAAQDPQLALYGGGTDGL 229 Query: 204 SHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 R +E +Q +V+ E+ L D G R L Sbjct: 230 ERPRAFLAAAVAVALPGATIVMEHAESQGEALVKAAEALGLRGAQTRCDLAGRPRFL 286 >gi|307564990|ref|ZP_07627507.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Prevotella amnii CRIS 21A-A] gi|307346303|gb|EFN91623.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Prevotella amnii CRIS 21A-A] Length = 286 Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 63/212 (29%), Positives = 95/212 (44%), Gaps = 8/212 (3%) Query: 16 GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75 LS +++ + L Q L I R E + +LG F + S PR Sbjct: 32 NLSFADILIGKVNELSQEQLLKLEELIRRIESFEPVQYVLGKETFLGRSFHVRSGVLIPR 91 Query: 76 PETELLVDSA---LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCK 132 PETE+LV+ + + + ++ILD+GTG+G + + L + P DIS + Sbjct: 92 PETEVLVEWVKEDCCTTACNLLDSNNIKILDIGTGSGCIAITLSLDIPHSNVTAWDISKE 151 Query: 133 ALEIAKSNAVTNGVSERFDTLQSDWF--SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDF 190 AL IAK NA + + + + D F + E ++VI+SNPPYI + V Sbjct: 152 ALLIAKENA--SALKGKVNFRLQDVFNVNVSERKWNVIISNPPYICCKEHTSMSDNVLKH 209 Query: 191 DPRISL-DGGIDGLSHYRTIADGVSRHLNKDG 221 +P I+L D L YR IA+ L K G Sbjct: 210 EPHIALFVPDDDPLRFYRAIANIGKSALIKGG 241 >gi|238764945|ref|ZP_04625883.1| Uncharacterized adenine-specific methylase [Yersinia kristensenii ATCC 33638] gi|238696804|gb|EEP89583.1| Uncharacterized adenine-specific methylase [Yersinia kristensenii ATCC 33638] Length = 310 Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 42/130 (32%), Positives = 67/130 (51%), Gaps = 2/130 (1%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ILD+ TG+G + +A P + VDIS L + + N +G+ + ++SD F Sbjct: 135 HILDMCTGSGCIAIACAYAFPEAEVDAVDISNDVLAVTEHNIQQHGMEHQVTPIRSDLFR 194 Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 + + +D+IV+NPPY+++ + L E R F+P + L G DGL R I L Sbjct: 195 DLPPIKYDLIVTNPPYVDAEDMADLPDEFR-FEPELGLAAGSDGLKLARRILACAPDFLQ 253 Query: 219 KDGLCSVEIG 228 DG+ E+G Sbjct: 254 DDGVLICEVG 263 >gi|146342880|ref|YP_001207928.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Bradyrhizobium sp. ORS278] gi|146195686|emb|CAL79713.1| putative adenine-specific methylase [Bradyrhizobium sp. ORS278] Length = 325 Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 46/134 (34%), Positives = 70/134 (52%), Gaps = 6/134 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 +LDL TG+G CLA+L F V VDIS AL +A N + ER + D F Sbjct: 162 VLDLCTGSG--CLAILASRHFPNAVIDAVDISKDALAVAARNVADYELGERISLHRGDLF 219 Query: 159 SSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217 + + + +D+I++NPPY+++ + L E R +P ++ DGG DGL I HL Sbjct: 220 APLSQRRYDLIITNPPYVDAEGMAGLPRECR-AEPALAFDGGADGLDIIHRIIGEARDHL 278 Query: 218 NKDGLCSVEIGYNQ 231 +G E+G ++ Sbjct: 279 TAEGGLLCEVGRDR 292 >gi|85059606|ref|YP_455308.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Sodalis glossinidius str. 'morsitans'] gi|84780126|dbj|BAE74903.1| conserved hypothetical protein [Sodalis glossinidius str. 'morsitans'] Length = 310 Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 44/138 (31%), Positives = 72/138 (52%), Gaps = 3/138 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 +LD+ TG+G + +A P + VDI+ L +A+ N +GV +R + SD F Sbjct: 135 HLLDMCTGSGCIAVACAYTYPEAEVDAVDIAPGVLAVAEHNIQAHGVEQRVTPILSDLFR 194 Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 + L +D I++NPPY++ ++ L E +P + L G DGL R I +L+ Sbjct: 195 DLPPLAYDAIITNPPYVDEEDMNDLPAEFHA-EPVLGLAAGSDGLKLVRRILAYAPDYLS 253 Query: 219 KDGLCSVEIGYNQKVDVV 236 +DG+ E+G N V +V Sbjct: 254 EDGVLICEVG-NSMVHLV 270 >gi|195343026|ref|XP_002038099.1| GM17937 [Drosophila sechellia] gi|194132949|gb|EDW54517.1| GM17937 [Drosophila sechellia] Length = 298 Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 65/244 (26%), Positives = 104/244 (42%), Gaps = 40/244 (16%) Query: 18 SSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPE 77 S Q+ ++P L D +RF L+H I+G DF ++ L S F PRPE Sbjct: 76 SYDQLQLNPGQ-LADLERFLEARCARMPLQH-----IIGEWDFMDITLKTSPSVFIPRPE 129 Query: 78 TE----LLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133 TE L++D + V +L++G G+GA+ L++L P ++ S A Sbjct: 130 TEEFMRLVIDDH--------KNAKHVDLLEVGCGSGAMSLSMLHSLPQVVATAIERSKAA 181 Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPR 193 +A NA G+ RF+ + + + Y+ V+ D ++++ Sbjct: 182 TVLAAENAKMLGLLNRFE------------VHNHTMEEDKYLPEVLKD------KNYENL 223 Query: 194 ISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI----FESRKLFLVNA 249 +LDGG DGL R + D RHL G +E+G + V I +E R F+ Sbjct: 224 NALDGGSDGLRVARLVFDLACRHLRPGGKLWLELGNDHPPMVKTIMNLKYEGRLKFIAGY 283 Query: 250 FKDY 253 Y Sbjct: 284 SDQY 287 >gi|119963466|ref|YP_948326.1| HemK family modification methylase [Arthrobacter aurescens TC1] gi|119950325|gb|ABM09236.1| putative modification methylase, HemK family [Arthrobacter aurescens TC1] Length = 290 Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 65/216 (30%), Positives = 93/216 (43%), Gaps = 16/216 (7%) Query: 50 SIHRILGWRDFYNVRLTLSSDTFEPRPETE----LLVDSALAFSLPRIEKRDVVRILDLG 105 + I G F ++ L + F PRPETE L++D P++ +DLG Sbjct: 73 PLQHITGVAYFRHLELCVGPGVFIPRPETESVVQLVIDHVAGVPTPKV--------VDLG 124 Query: 106 TGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF 165 TG+GA+ ++ E P + V+ S A A N GV+ L+ D G F Sbjct: 125 TGSGAIAGSIAHEVPGAEVHAVEFSTFAHAWAAKNLEPLGVTLVQGDLR-DALPEHNGTF 183 Query: 166 DVIVSNPPYIESVIVDCLGLEVRDFDPRISL-DGGIDGLSHYRTIADGVSRHLNKDGLCS 224 DV+VSNPPYI S + EV DP +L GG DG+ A +R L G Sbjct: 184 DVVVSNPPYIPSEAIPTE-PEVALHDPPEALYGGGADGMVLPTAAAASAARLLKPGGFFV 242 Query: 225 VEIGYNQKVDVVRIFE-SRKLFLVNAFKDYGGNDRV 259 +E Q V + + E + + V D G +R Sbjct: 243 MEHAEVQAVWIAGMLERTGRWNNVTTHCDLNGKERA 278 >gi|293410687|ref|ZP_06654263.1| hypothetical protein ECEG_01659 [Escherichia coli B354] gi|291471155|gb|EFF13639.1| hypothetical protein ECEG_01659 [Escherichia coli B354] Length = 314 Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 43/130 (33%), Positives = 69/130 (53%), Gaps = 2/130 (1%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ILD+ TG+G + +A P + VDIS AL +A+ N +G+ ++SD F Sbjct: 139 HILDMCTGSGCIAIACAYAFPDAEVDAVDISPDALAVAEQNIEEHGLIHNVIPIRSDLFR 198 Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 + + +D+IV+NPPY+++ + L E R +P + L G DGL R I + +L Sbjct: 199 DLPKVQYDLIVTNPPYVDAEDMSDLPNEYR-HEPELGLASGSDGLKLTRRILGNAADYLA 257 Query: 219 KDGLCSVEIG 228 DG+ E+G Sbjct: 258 DDGVLICEVG 267 >gi|325963839|ref|YP_004241745.1| methylase of HemK family [Arthrobacter phenanthrenivorans Sphe3] gi|323469926|gb|ADX73611.1| putative methylase of HemK family [Arthrobacter phenanthrenivorans Sphe3] Length = 295 Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 54/159 (33%), Positives = 74/159 (46%), Gaps = 15/159 (9%) Query: 50 SIHRILGWRDFYNVRLTLSSDTFEPRPETE----LLVDSALAFSLPRIEKRDVVRILDLG 105 + I G F ++L + F PRPETE L++D PRI +DLG Sbjct: 73 PLQHITGVAHFRYLQLAVGPGVFIPRPETESVVQLVIDHVQGLPHPRI--------VDLG 124 Query: 106 TGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF 165 TG+GA+ +L E P + V+ S A A N GV L+ + + G F Sbjct: 125 TGSGAIAGSLAHEVPGAEVHAVEFSPFAHAWAAKNLAPLGVHLVQGDLR-NALPELNGTF 183 Query: 166 DVIVSNPPYIESVIVDCLGLEVRDFDPRISL-DGGIDGL 203 DV+VSNPPYI + + EV DP +L GG DG+ Sbjct: 184 DVVVSNPPYIPAEAIPHE-PEVALHDPPEALYGGGADGM 221 >gi|215487543|ref|YP_002329974.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli O127:H6 str. E2348/69] gi|215265615|emb|CAS10018.1| N5-glutamine methyltransferase [Escherichia coli O127:H6 str. E2348/69] Length = 310 Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 43/130 (33%), Positives = 69/130 (53%), Gaps = 2/130 (1%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ILD+ TG+G + +A P + VDIS AL +A+ N +G+ ++SD F Sbjct: 135 HILDMCTGSGCIAIACAYAFPDAEVDAVDISPDALAVAEQNIEEHGLIHNVIPIRSDLFR 194 Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 + + +D+IV+NPPY+++ + L E R +P + L G DGL R I + +L Sbjct: 195 DLPKVQYDLIVTNPPYVDAEDMSDLPNEYR-HEPELGLVSGTDGLKLTRRILGNAADYLA 253 Query: 219 KDGLCSVEIG 228 DG+ E+G Sbjct: 254 DDGVLICEVG 263 >gi|229818481|ref|ZP_04448762.1| hypothetical protein BIFANG_03789 [Bifidobacterium angulatum DSM 20098] gi|229784351|gb|EEP20465.1| hypothetical protein BIFANG_03789 [Bifidobacterium angulatum DSM 20098] Length = 318 Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 68/269 (25%), Positives = 117/269 (43%), Gaps = 28/269 (10%) Query: 12 CRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDT 71 C ++ + ++ DP + D +RF + R E + I+G F + L + Sbjct: 59 CELSDVDKAMLMGDP--IDYDAERFGAM--LARRANREPLQYIVGHAPFRYLDLEVGPGV 114 Query: 72 FEPRPETELLVDSALAFSLPRIEKRDVV--RILDLGTGTGAVCLALLKESPFFKGVGVDI 129 F PR ETEL+ + + I + + R++DL G+GA+ L+++ E P GV+I Sbjct: 115 FIPRQETELVAQEGIDW----ITRNGLYNPRVVDLCAGSGAIGLSIVTEVPGSHVWGVEI 170 Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDW------------FSSVEGLFDVIVSNPPYI-E 176 + +A + N R+ L S++ + ++G D++++NPPY+ + Sbjct: 171 NQQAAAWTRRNIAA--TMRRWPALASNYELEIGDATNATTLAKLDGSIDMVITNPPYVPQ 228 Query: 177 SVIVDCLGLEVRDFDPRISLDGG-IDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235 + I D EVRD DP ++L GG DG I SR L L +E +Q + Sbjct: 229 NNIPDQ--PEVRDHDPELALYGGSADGTLIPERIIRRASRLLRAQALFVMEHDISQGDRL 286 Query: 236 VRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 V+ DY R L+ + Sbjct: 287 TAFARINGFEQVHVRNDYTNRPRYLVAVK 315 >gi|262341100|ref|YP_003283955.1| putative methyltransferase small domain protein [Blattabacterium sp. (Blattella germanica) str. Bge] gi|262272437|gb|ACY40345.1| putative methyltransferase small domain protein [Blattabacterium sp. (Blattella germanica) str. Bge] Length = 299 Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 55/192 (28%), Positives = 92/192 (47%), Gaps = 11/192 (5%) Query: 47 KHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGT 106 K+ I ++G F+ + ++ F PRPETE LV L + + + V+I D+GT Sbjct: 71 KNRPIQYVIGKAYFFGMEFIVNEKVFIPRPETEELVYWILQDN--KNKNTSKVQIFDIGT 128 Query: 107 GTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVS---ERFDTLQSDWF--SS 160 G+G + +AL K+ P + V +D + L+IA+ NA + V ++ D L+ F Sbjct: 129 GSGCISIALKKKKPEMEHVYAIDSYQETLDIARKNAELHNVEISFKKVDILKDSIFIPKM 188 Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD-GGIDGLSHYRTIADGVSRHLNK 219 + +IVSNPPY+ L + ++P +L D L Y+ I+ + + L Sbjct: 189 NKNSVSIIVSNPPYVRLSEKKLLHPNIIQYEPFQALFVPDEDPLIFYKKISFWIQKKLT- 247 Query: 220 DGLCSVEIGYNQ 231 G+ V NQ Sbjct: 248 -GVVYVYFEINQ 258 >gi|224065793|ref|XP_002189936.1| PREDICTED: similar to HemK methyltransferase family member 1 [Taeniopygia guttata] Length = 305 Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 47/150 (31%), Positives = 73/150 (48%), Gaps = 22/150 (14%) Query: 44 RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLV------------DSALAFSLP 91 + L+ + +LG DF ++ L + F PRPETE LV +S L F +P Sbjct: 65 KRLQRMPVQYVLGEWDFQDLTLKMRPPVFIPRPETEDLVSLVVEEEFQKCENSTLCFPVP 124 Query: 92 RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151 IL++G G+GA+ L+LL + P + + +D A+++ + NA + ER Sbjct: 125 VPHPV----ILEIGCGSGAIALSLLCKLPQSRVIAMDKEEAAVDLTRENAHRLQLQERIR 180 Query: 152 TLQSDWFSS------VEGLFDVIVSNPPYI 175 + D S + G DVIVSNPPY+ Sbjct: 181 IIHQDVSHSSAKQLLLWGPIDVIVSNPPYV 210 >gi|332978419|gb|EGK15136.1| protein-(glutamine-N5) methyltransferase [Psychrobacter sp. 1501(2011)] Length = 402 Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 43/133 (32%), Positives = 71/133 (53%), Gaps = 7/133 (5%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 RILDL TG+ C+A+ S F + DI ALE+A N +G+ + + ++SD Sbjct: 222 RILDLCTGSA--CIAIALASRFRDALVDAADIDTSALEVAAVNVEHHGMEHQLNLIESDL 279 Query: 158 FSSV--EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215 F + E +++IV+NPPY+++ + L E +P +L G DGL I + + Sbjct: 280 FDKIPAENQYELIVTNPPYVDAAAMAELPPEFI-HEPEHALAAGQDGLDLVHKILNEAAD 338 Query: 216 HLNKDGLCSVEIG 228 +L+ +GL E+G Sbjct: 339 YLSPEGLLVCEVG 351 >gi|225350886|ref|ZP_03741909.1| hypothetical protein BIFPSEUDO_02460 [Bifidobacterium pseudocatenulatum DSM 20438] gi|225158342|gb|EEG71584.1| hypothetical protein BIFPSEUDO_02460 [Bifidobacterium pseudocatenulatum DSM 20438] Length = 307 Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 59/232 (25%), Positives = 103/232 (44%), Gaps = 22/232 (9%) Query: 44 RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV--VRI 101 R K E + I G F + L + F PR ETEL+V + + I K + ++ Sbjct: 78 RRSKREPLQHITGHAPFRYLDLKVGPGVFIPRQETELVVQEGVDW----ITKHGMYSAKV 133 Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW---- 157 +DL G+GA+ L+ + E P + V+ S + + + N N ++++ ++ S++ Sbjct: 134 VDLCAGSGAIGLSFVTEVPGSEVWAVEKSEQTAQWTRVN--LNETAKKYPSIASNYHLEI 191 Query: 158 --------FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG-IDGLSHYRT 208 + ++G D++++NPPY+ + EVRD+DP ++L GG DG Sbjct: 192 ADATQTPTLNQLDGTIDIVLTNPPYVPLADIPQQP-EVRDYDPDLALYGGSADGTLIPER 250 Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 I ++ L GL +E Q + S V DY G R + Sbjct: 251 IIARAAKLLKNGGLLVMEHDITQGERLSAFALSYGFSNVMVHNDYTGRPRYM 302 >gi|320096083|ref|ZP_08027683.1| HemK family modification methylase [Actinomyces sp. oral taxon 178 str. F0338] gi|319976963|gb|EFW08706.1| HemK family modification methylase [Actinomyces sp. oral taxon 178 str. F0338] Length = 293 Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 69/261 (26%), Positives = 114/261 (43%), Gaps = 15/261 (5%) Query: 10 FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69 + C L S ++ P+ V +R L A+ + + I G F ++ L + Sbjct: 37 WACGADSLWSAPPLLAPEEV----ER--LRGAVSARARRVPLQHITGRMHFRSLALRAAP 90 Query: 70 DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129 F RPETE + +A+ + + +R ++DL +G+GA+ +A+ E P + V+ Sbjct: 91 GVFVVRPETECVAQAAIDRARTAVGRRGSATVVDLCSGSGAIAIAVATEVPGCRVWAVEA 150 Query: 130 SCKALEIAKSN--AVTNGVSERF--DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185 A +A SN A+ G E D + ++G DV+VSNPPY+ + D + Sbjct: 151 DEAAARLAASNIGALAPGRVELLLADATDGAALAHLDGSADVVVSNPPYVPA---DEMPD 207 Query: 186 EVRDF-DPRISLDGG-IDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 + DP +L GG DG + R +A L G +E +Q + R ES Sbjct: 208 QPEALADPAGALYGGSPDGTAVPRLVARRALGLLAPGGALVMEHSPSQSAAMRRAAESLG 267 Query: 244 LFLVNAFKDYGGNDRVLLFCR 264 + +D G DR L+ R Sbjct: 268 YCCASTHRDLAGRDRYLVAER 288 >gi|88799004|ref|ZP_01114585.1| modification methylase, HemK family protein [Reinekea sp. MED297] gi|88778231|gb|EAR09425.1| modification methylase, HemK family protein [Reinekea sp. MED297] Length = 313 Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 50/170 (29%), Positives = 81/170 (47%), Gaps = 6/170 (3%) Query: 60 FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119 F + ++SD PR L+++ L +R +LDL TG+G + +A+ + Sbjct: 104 FCHEPFYVTSDVLIPRSPIAELIEARFEPWLSSAPQR----LLDLCTGSGCIGIAMARVF 159 Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESV 178 P D+S A+ IA SN + + + Q D F + + +D+IVSNPPY+++ Sbjct: 160 PEALVDLSDLSDSAVHIATSNVAQKDLEYQVNAYQGDLFDGLPQTRYDLIVSNPPYVDAE 219 Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228 +D + E +PR+ L G DGL R I L +DG E+G Sbjct: 220 DIDDMPAEF-SHEPRLGLAAGGDGLDIVRRILSQAPDFLTEDGWLVCEVG 268 >gi|325295295|ref|YP_004281809.1| methyltransferase small [Desulfurobacterium thermolithotrophum DSM 11699] gi|325065743|gb|ADY73750.1| methyltransferase small [Desulfurobacterium thermolithotrophum DSM 11699] Length = 249 Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 34/83 (40%), Positives = 49/83 (59%), Gaps = 8/83 (9%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ----- 154 +I+DLGTG G + + LLK+ P K +D+ + + I+K N NGVSERF L Sbjct: 47 KIIDLGTGCGVIPILLLKKYPQLKAFAIDVLEENINISKKNGEINGVSERFTALHLNVKE 106 Query: 155 -SDWFSSVEGLFDVIVSNPPYIE 176 F S G FD++++NPP+IE Sbjct: 107 VKKVFKS--GEFDIVITNPPFIE 127 >gi|332675655|gb|AEE72471.1| protein methyltransferase HemK [Propionibacterium acnes 266] Length = 245 Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 50/168 (29%), Positives = 79/168 (47%), Gaps = 8/168 (4%) Query: 31 DDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSL 90 DD RF + R E I+G F +RL + F PR ETEL+ + ++ + Sbjct: 7 DDEDRF--NQMVDRRRSGEPAQYIIGHAWFRGLRLEVGPGVFIPRLETELVAEQSIQEAR 64 Query: 91 PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150 + ++DL TGTGA+ LA+ E P + V++ AL + N +GV Sbjct: 65 RLVMSGACPSVIDLCTGTGAIALAVASEVPGSRVSAVEVDDAALTWTRRNLCDSGV---- 120 Query: 151 DTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL 196 + L D + FDV+V+NPPY+ V + EV + +P ++L Sbjct: 121 EVLAGDALRVPDDGRRFDVVVTNPPYLRRSDVSSIPGEVTEHEPDLAL 168 >gi|71665723|ref|XP_819828.1| hypothetical protein [Trypanosoma cruzi strain CL Brener] gi|70885147|gb|EAN97977.1| hypothetical protein, conserved [Trypanosoma cruzi] Length = 420 Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 54/206 (26%), Positives = 96/206 (46%), Gaps = 32/206 (15%) Query: 32 DRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSL 90 D R + A+++ + H+ + I+G + FY + PRPETE+ + L Sbjct: 140 DAARRAVKKAVLQRVDLHKPLAYIIGNQPFYGCNIHCFPPLLCPRPETEMWTHWFVQRHL 199 Query: 91 PRI--EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS- 147 R +++ +R+LD+ GTG V +A+ P + V VD+ +A+++++ NA NG+ Sbjct: 200 SRATADEKSPLRVLDMCCGTGCVGIAIAVHLPHTEVVAVDVMEEAVKVSEENARRNGIHV 259 Query: 148 ERFDTLQSDWFSS-VE---------------------------GLFDVIVSNPPYIESVI 179 R+ ++SD F + VE G FD+IVSNPPY+ Sbjct: 260 SRYRAIKSDMFEAFVELDDTSSSGKNKEGISENKKTQIADLHVGSFDIIVSNPPYVLPEQ 319 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSH 205 L ++ ++ +I+L G +H Sbjct: 320 YVQLHPGIKLWESKIALVGDAKRENH 345 >gi|282853791|ref|ZP_06263128.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Propionibacterium acnes J139] gi|282583244|gb|EFB88624.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Propionibacterium acnes J139] gi|314981452|gb|EFT25546.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes HL110PA3] gi|315092116|gb|EFT64092.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes HL110PA4] Length = 291 Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 53/193 (27%), Positives = 86/193 (44%), Gaps = 8/193 (4%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ LC + Q+I DD RF + R E I+G F +RL Sbjct: 28 DARMLLCGALRIQPSQLIRVTSVNADDEDRF--NQMVDRRRGGEPAQYIIGHAWFRGLRL 85 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 + F PR ETEL+ + ++ + + ++DL TGTGA+ LA+ E P + Sbjct: 86 EVGPGVFIPRLETELVAEQSIQEARRLVMSGACPSVIDLCTGTGAIALAVASEVPGSRVS 145 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCL 183 V++ AL + N +GV + L D + FD++V+NPPY+ + Sbjct: 146 AVEVDDAALMWTRRNLGDSGV----EVLTGDALRVPDDGRRFDIVVTNPPYLRRSDASSI 201 Query: 184 GLEVRDFDPRISL 196 EV + +P ++L Sbjct: 202 PGEVTEHEPDLAL 214 >gi|282880495|ref|ZP_06289202.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Prevotella timonensis CRIS 5C-B1] gi|281305598|gb|EFA97651.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Prevotella timonensis CRIS 5C-B1] Length = 283 Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 68/257 (26%), Positives = 112/257 (43%), Gaps = 25/257 (9%) Query: 16 GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75 G+S +I S L + L I+R + E + ILG ++F +S PR Sbjct: 33 GMSLTDIICGKVSELSTDECQSLQEIILRLQRFEPVQYILGVKEFAGRTFHVSPGVLIPR 92 Query: 76 PET----ELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131 ET + +VD+ + K ILD+GTG+G + + L E K V D+S Sbjct: 93 DETAELCQWIVDTI------QESKLKSPTILDIGTGSGCIAITLSLEIQKAKVVAWDVST 146 Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDF 190 A+++A NA G + Q+ + + + +D+IVSNPPYI + + V + Sbjct: 147 TAIQVANQNARDLGATVSI-VCQNALNAPRDAMKWDIIVSNPPYICPTEAEEMEPNVLSY 205 Query: 191 DPRISLDGG-------IDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 +P+ +L D ++HY T A L G EI + VV + +++ Sbjct: 206 EPKEALFVPENHPLLFYDAIAHYATTA------LKPHGKLYFEINPLYRKSVVEMLKNKG 259 Query: 244 LFLVNAFKDYGGNDRVL 260 V KD G +R++ Sbjct: 260 FIGVMIRKDAFGKERMV 276 >gi|323339962|ref|ZP_08080229.1| protein-(glutamine-N5) methyltransferase [Lactobacillus ruminis ATCC 25644] gi|323092604|gb|EFZ35209.1| protein-(glutamine-N5) methyltransferase [Lactobacillus ruminis ATCC 25644] Length = 120 Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 39/107 (36%), Positives = 60/107 (56%), Gaps = 1/107 (0%) Query: 155 SDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214 SD F++++G FD+IVSNPPYI + V + +P ++L +GL+ Y+ I + Sbjct: 10 SDVFAAIDGKFDIIVSNPPYIAESEKKYMDKSVLEHEPTLALFAENNGLAIYQKICRQLK 69 Query: 215 RHLNKDGLCSVEIGYNQKVDVVRIFE-SRKLFLVNAFKDYGGNDRVL 260 HL DG +EIG+ Q VV +FE + V KD G+DR++ Sbjct: 70 DHLKNDGSLYLEIGFLQGKAVVEMFEKAYPKAEVTLKKDESGHDRMV 116 >gi|317056867|ref|YP_004105334.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Ruminococcus albus 7] gi|315449136|gb|ADU22700.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Ruminococcus albus 7] Length = 283 Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 62/219 (28%), Positives = 98/219 (44%), Gaps = 13/219 (5%) Query: 28 SVLDDRQRFFLTN----AIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVD 83 S LDD L+ R E + +LG +F + L + PR +TE LV+ Sbjct: 45 SALDDEADGILSKDFEKLCERRRNGEPLQYLLGEWEFCGIPLKVGKGVLIPRQDTETLVE 104 Query: 84 SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143 ++ + + D + +DL +G+G + LA+ + K V+ S A + N Sbjct: 105 ----LAVNKYKNTDGIVAVDLCSGSGCIALAVERFLKCSKVYAVEKSEAAAVHLRENLKM 160 Query: 144 NGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200 NG + + D L+ S+ D+IV NPPY+ ++ L EV ++P +L GG Sbjct: 161 NGSAVQLIMGDVLEYGCAESIPEC-DLIVCNPPYLTGEDMERLQKEVT-YEPVEALFGGE 218 Query: 201 DGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 DGL YR + L G EIG Q+ DV++I Sbjct: 219 DGLDFYRAVTRIWKNRLKTGGTLIYEIGMGQEDDVMQIM 257 >gi|315092953|gb|EFT64929.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes HL060PA1] Length = 291 Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 53/193 (27%), Positives = 86/193 (44%), Gaps = 8/193 (4%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ LC + Q+I DD RF + R E I+G F +RL Sbjct: 28 DARMLLCGALRIQPSQLIRVTSVNADDEDRF--NQMVDRCRGGEPAQYIIGHAWFRGLRL 85 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 + F PR ETEL+ + ++ + + ++DL TGTGA+ LA+ E P + Sbjct: 86 EVGPGVFIPRLETELVAEQSIQEARRLVMSGACPSVIDLCTGTGAIALAVASEVPGSRVS 145 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCL 183 V++ AL + N +GV + L D + FD++V+NPPY+ + Sbjct: 146 AVEVDDAALMWTRRNLGDSGV----EVLTGDALRVPDDGRRFDIVVTNPPYLRRSDASSI 201 Query: 184 GLEVRDFDPRISL 196 EV + +P ++L Sbjct: 202 PGEVTEHEPDLAL 214 >gi|314923483|gb|EFS87314.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes HL001PA1] gi|314966527|gb|EFT10626.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes HL082PA2] gi|327327351|gb|EGE69127.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes HL103PA1] Length = 291 Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 53/193 (27%), Positives = 86/193 (44%), Gaps = 8/193 (4%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ LC + Q+I DD RF + R E I+G F +RL Sbjct: 28 DARMLLCGALRIQPSQLIRVTSVNADDEDRF--NQMVDRRRGGEPAQYIIGHAWFRGLRL 85 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 + F PR ETEL+ + ++ + + ++DL TGTGA+ LA+ E P + Sbjct: 86 EVGPGVFIPRLETELVAEQSIQEARRLVMSGACPSVIDLCTGTGAIALAVASEVPGSRVS 145 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCL 183 V++ AL + N +GV + L D + FD++V+NPPY+ + Sbjct: 146 AVEVDDAALMWTRRNLGDSGV----EVLTGDALRVPDDGRRFDIVVTNPPYLRRSDASSI 201 Query: 184 GLEVRDFDPRISL 196 EV + +P ++L Sbjct: 202 PGEVTEHEPDLAL 214 >gi|294955906|ref|XP_002788739.1| n6-DNA-methyltransferase, putative [Perkinsus marinus ATCC 50983] gi|239904280|gb|EER20535.1| n6-DNA-methyltransferase, putative [Perkinsus marinus ATCC 50983] Length = 213 Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 49/156 (31%), Positives = 82/156 (52%), Gaps = 11/156 (7%) Query: 76 PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135 PETEL+V L LP RILDL +G+G + +AL + D+S +A+ Sbjct: 16 PETELMVQRILEGGLPGGR-----RILDLCSGSGVIGIALATAWATMRVDLADLSEQAMG 70 Query: 136 IAKSNAVTNGVSERFDTL----QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFD 191 +A+ NA GV +R L F++ +D++VSNPPYI + V L V++ + Sbjct: 71 LARENAKRFGVYDRLKFLVGPISDQEFTA--NSYDMVVSNPPYIPTESVGNLSRTVKNHE 128 Query: 192 PRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227 ++LDGG +G++ + + + S L +G+ +E+ Sbjct: 129 DILALDGGEEGMNIVQEVLNVSSMVLKPNGMLWMEL 164 >gi|327399627|ref|YP_004340496.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Hippea maritima DSM 10411] gi|327182256|gb|AEA34437.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Hippea maritima DSM 10411] Length = 266 Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 71/257 (27%), Positives = 126/257 (49%), Gaps = 49/257 (19%) Query: 22 VIVDPDSVLDDRQRFF---LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPET 78 V+ +P L+DRQ LTN R L++ + I ++FY + + PRPET Sbjct: 41 VLTNPQKELNDRQIEEIERLTNK--RKLRYPMAY-ITHSKEFYGLEFYVDDRVLIPRPET 97 Query: 79 ELLVDSALAFSLPRIEKRDV--VRILDLGTGTG--AVCLALLKESPFFKGVGVDISCKAL 134 EL+VD L + D+ +I+D+GTG+G A+ L+ L ++ DIS +AL Sbjct: 98 ELIVDVTLKIA------SDIKNPKIVDIGTGSGCIAITLSKLLDTHI---TASDISKEAL 148 Query: 135 EIAKSNAVTNGVSERFDT----LQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDF 190 +AK NA +R D + ++ ++ D+I +NPPY+ + L +V+ F Sbjct: 149 NVAKLNA------KRLDADISLINANGLDFLKNGIDIITTNPPYVLENEYELLSEDVK-F 201 Query: 191 DPRISL-----DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245 +P+I+L +G I+ L ++ L K +EIG +Q ++I ++ + + Sbjct: 202 EPKIALIPPSGNGFIEDLIEK-------AKQLTK--WLIMEIGPSQ----LKIIKNSR-Y 247 Query: 246 LVNAFKDYGGNDRVLLF 262 + +D+ +RV +F Sbjct: 248 IYKIIRDFSNKERVAVF 264 >gi|312194250|ref|YP_004014311.1| modification methylase, HemK family [Frankia sp. EuI1c] gi|311225586|gb|ADP78441.1| modification methylase, HemK family [Frankia sp. EuI1c] Length = 290 Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 53/199 (26%), Positives = 86/199 (43%), Gaps = 5/199 (2%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR---ILDLGTG 107 + +LGW +F+ R+ + F PR TE LVD A L V R ++DL G Sbjct: 69 LEHVLGWAEFHGQRILVDDGVFVPRRRTEFLVDLAAGRWLADRAAEAVPRAAVVVDLCCG 128 Query: 108 TGAV--CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF 165 +GA+ +A L S + DI A+ A+ N G L + + Sbjct: 129 SGALGAVVAGLLRSSGVELHAADIDPAAVRCARRNLAPLGGQLYEGDLYAALPVGLRNRV 188 Query: 166 DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225 D+++ N PY+ + + + E R+ + ++LDGG DGL+ R + G L G V Sbjct: 189 DLLLVNAPYVPTAAIGLMPPEAREHESPVALDGGSDGLAVLRRVLAGAGDWLAVGGRLLV 248 Query: 226 EIGYNQKVDVVRIFESRKL 244 E Q +++ + L Sbjct: 249 ETSEAQATELIAAVSAAGL 267 >gi|261403419|ref|YP_003247643.1| methylase [Methanocaldococcus vulcanius M7] gi|261370412|gb|ACX73161.1| methylase [Methanocaldococcus vulcanius M7] Length = 198 Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 50/167 (29%), Positives = 87/167 (52%), Gaps = 15/167 (8%) Query: 59 DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118 +F +++ L S+ +EP +T LL+ + + +E ++V L++G GTG + +A K Sbjct: 4 EFEGIKIKLHSEVYEPAEDTFLLLKNIV-----DVENKEV---LEIGVGTGIISIACAKR 55 Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESV 178 K VGVDI+ A+ +A NA N V+ ++SD F +V G FDVI+ NPPY+ ++ Sbjct: 56 GAK-KVVGVDINPFAVNLALENAKLNNVN-NVSFIKSDLFENVRGEFDVILFNPPYLPTL 113 Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225 D L + + + +GG G + V +L + G+ + Sbjct: 114 DEDKL-----EGNIDYAFNGGKSGREVLNRFLEEVGDYLKEGGVVQI 155 >gi|315103526|gb|EFT75502.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes HL050PA2] Length = 291 Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 53/193 (27%), Positives = 86/193 (44%), Gaps = 8/193 (4%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ LC + Q+I DD RF + R E I+G F +RL Sbjct: 28 DARMLLCGALRIQPSQLIRVTSVNADDEDRF--NQMVDRRRGGEPAQYIIGHAWFRGLRL 85 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 + F PR ETEL+ + ++ + + ++DL TGTGA+ LA+ E P + Sbjct: 86 EVGPGVFIPRLETELVAEQSIQEARRLVMSGACPSVIDLCTGTGAIALAVASEVPGSRVS 145 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCL 183 V++ AL + N +GV + L D + FD++V+NPPY+ + Sbjct: 146 AVEVDDAALMWTRRNLGDSGV----EVLTGDALRVPDDGRRFDIVVTNPPYLRRSDASSV 201 Query: 184 GLEVRDFDPRISL 196 EV + +P ++L Sbjct: 202 PGEVTEHEPDLAL 214 >gi|254490180|ref|ZP_05103371.1| methyltransferase, HemK family [Methylophaga thiooxidans DMS010] gi|224464666|gb|EEF80924.1| methyltransferase, HemK family [Methylophaga thiooxydans DMS010] Length = 308 Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 46/134 (34%), Positives = 73/134 (54%), Gaps = 3/134 (2%) Query: 97 DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 DV ILDL TG+G + +AL VDIS AL +A N + ++++ ++QSD Sbjct: 133 DVSAILDLCTGSGCIAIALAMAFENAHVDAVDISHDALAVADININKHQLNDQVRSIQSD 192 Query: 157 WFSSVE--GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214 + S+E +D+I+SNPPY+ + + L E R +P +L+ +GL+ I + Sbjct: 193 CWQSLEPANQYDLIISNPPYVGADEMAGLPEEYR-HEPVSALEAEDNGLALVEQILLNAA 251 Query: 215 RHLNKDGLCSVEIG 228 +L DGL VE+G Sbjct: 252 DYLTDDGLLFVEVG 265 >gi|212225058|ref|YP_002308294.1| N5-glutamine methyltransferase [Thermococcus onnurineus NA1] gi|212010015|gb|ACJ17397.1| N5-glutamine methyltransferase [Thermococcus onnurineus NA1] Length = 194 Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 39/116 (33%), Positives = 67/116 (57%), Gaps = 11/116 (9%) Query: 60 FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119 + ++L L +EP +T LL ++ ++ DV LD+GTGTG + L + +++ Sbjct: 5 YKGLKLKLHPQVYEPAEDTFLLAENL------AVKHGDVA--LDMGTGTGIIALLMARKA 56 Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYI 175 + +GVD++ A+++A+ NA NG+ E + +QS+ F V G FDVI N PY+ Sbjct: 57 EYV--LGVDVNPLAIKLARENARLNGI-ENVEFIQSNLFEGVNGEFDVITFNAPYL 109 >gi|327394635|dbj|BAK12057.1| methylase HemK family protein YfcB [Pantoea ananatis AJ13355] Length = 292 Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 47/166 (28%), Positives = 81/166 (48%), Gaps = 6/166 (3%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ILD+ TG+G + +A P + VDIS AL +A+ N +G+ +++D F Sbjct: 117 HILDMCTGSGCIAIACAYAFPDAEVDAVDISHDALAVAEQNIEEHGLIHHVTPIRADLFR 176 Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 + + +D+IV+NPPY+++ +D L E + +P + L G DGL R I +L+ Sbjct: 177 ELPPVQYDLIVTNPPYVDAEDMDDLPSEYQ-HEPELGLAAGSDGLKLVRRILACAPGYLS 235 Query: 219 KDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 + G+ E+G + +V + E + G D V + R Sbjct: 236 EQGVLICEVGNS----MVHMMEQYPDVPFTWLEFDNGGDGVFMLTR 277 >gi|291618242|ref|YP_003520984.1| YfcB [Pantoea ananatis LMG 20103] gi|291153272|gb|ADD77856.1| YfcB [Pantoea ananatis LMG 20103] Length = 340 Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 47/166 (28%), Positives = 81/166 (48%), Gaps = 6/166 (3%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ILD+ TG+G + +A P + VDIS AL +A+ N +G+ +++D F Sbjct: 165 HILDMCTGSGCIAIACAYAFPDAEVDAVDISHDALAVAEQNIEEHGLIHHVTPIRADLFR 224 Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 + + +D+IV+NPPY+++ +D L E + +P + L G DGL R I +L+ Sbjct: 225 ELPPVQYDLIVTNPPYVDAEDMDDLPSEYQ-HEPELGLAAGSDGLKLVRRILACAPGYLS 283 Query: 219 KDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 + G+ E+G + +V + E + G D V + R Sbjct: 284 EQGVLICEVGNS----MVHMMEQYPDVPFTWLEFDNGGDGVFMLTR 325 >gi|169838353|ref|ZP_02871541.1| modification methylase, HemK family protein [candidate division TM7 single-cell isolate TM7a] Length = 278 Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 54/185 (29%), Positives = 88/185 (47%), Gaps = 19/185 (10%) Query: 48 HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR--ILDLG 105 H I IL +++FY + ++ T PRPE+E ++++ +I +D V +D+G Sbjct: 72 HVPIAYILKYKEFYGRKFKVTPATLIPRPESEDIINAI------KILNKDTVSKSAIDIG 125 Query: 106 TGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA----VTNGVSERFDTLQSDWFSSV 161 TG+G + + E P K DIS +AL IA NA +++ F L S Sbjct: 126 TGSGILGITTSLECPNIKVDLSDISPEALNIASINASNLKAKVNINKPFSLL-----SET 180 Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221 FD I++N PY++ D ++R +P ++L GL + HLN+DG Sbjct: 181 NKKFDYIIANLPYVDKSWQDT-SPDLR-HEPALALYADKSGLELIFKLIKQSPSHLNRDG 238 Query: 222 LCSVE 226 L +E Sbjct: 239 LIFLE 243 >gi|15645009|ref|NP_207179.1| protoporphyrinogen oxidase (hemK) [Helicobacter pylori 26695] gi|2313486|gb|AAD07450.1| protoporphyrinogen oxidase (hemK) [Helicobacter pylori 26695] Length = 276 Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 64/236 (27%), Positives = 103/236 (43%), Gaps = 29/236 (12%) Query: 31 DDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSL 90 ++ RFF + + L + I +L DFY ++ PRPETE+LV AL Sbjct: 51 EEEVRFF--ELVEKRLNNCPIEYLLESCDFYGRSFFVNEHVLIPRPETEILVQKALDI-- 106 Query: 91 PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150 I + + I ++G G+G V ++L E+P DIS ALE+A N + ER Sbjct: 107 --ISQYHLKEIGEIGIGSGCVSVSLALENPNLSIYASDISPNALEVASKNIEHFCLKERV 164 Query: 151 DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDF--------DPRISLDGGIDG 202 Q+ + + + +++VSNPPYI R++ +P +L GG+ G Sbjct: 165 FLKQTRLWDHMP-MIEMLVSNPPYI-----------ARNYPLEKSVLKEPHEALFGGVKG 212 Query: 203 LSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258 + I ++ K E+GY+Q + E + +KD G DR Sbjct: 213 DEILKEIVFLAAKL--KIPFLVCEMGYDQLKSLKECLEFCG-YDAEFYKDLSGFDR 265 >gi|332637119|ref|ZP_08415982.1| 16S RNA G1207 methylase RsmC [Weissella cibaria KACC 11862] Length = 205 Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 34/74 (45%), Positives = 47/74 (63%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 +ILDLG G G V +AL P + V +I+ +A E+ K NA NGVS+R D + SD +S Sbjct: 61 KILDLGAGYGPVSIALATVMPDREFVAAEINERAAELVKRNAQKNGVSDRIDVVLSDRYS 120 Query: 160 SVEGLFDVIVSNPP 173 V+G F I++NPP Sbjct: 121 GVDGKFAAILTNPP 134 >gi|283786408|ref|YP_003366273.1| methylase [Citrobacter rodentium ICC168] gi|282949862|emb|CBG89485.1| putative methylase [Citrobacter rodentium ICC168] Length = 310 Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 41/130 (31%), Positives = 68/130 (52%), Gaps = 2/130 (1%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ILD+ TG+G + +A P + VDIS AL + + N +G+ ++SD F Sbjct: 135 HILDMCTGSGCIAIACAYAFPEAEVDAVDISTDALAVTEHNIEEHGLIHHVTPIRSDLFR 194 Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 + + +D+IV+NPPY+++ + L E R +P + L G DGL R I +L+ Sbjct: 195 DLPKVQYDLIVTNPPYVDAEDMSDLPNEYR-HEPELGLASGSDGLKLTRRILGNAPDYLS 253 Query: 219 KDGLCSVEIG 228 +G+ E+G Sbjct: 254 DNGILICEVG 263 >gi|238759038|ref|ZP_04620208.1| Uncharacterized adenine-specific methylase [Yersinia aldovae ATCC 35236] gi|238702715|gb|EEP95262.1| Uncharacterized adenine-specific methylase [Yersinia aldovae ATCC 35236] Length = 310 Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 41/130 (31%), Positives = 66/130 (50%), Gaps = 2/130 (1%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ILD+ TG+G + +A P + VDIS L + + N + + + ++SD F Sbjct: 135 HILDMCTGSGCIAIACAYAFPDAEVDAVDISNDVLAVTEHNIQQHAMEHQVTPIRSDLFR 194 Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 + + +D+IV+NPPY+++ + L E R F+P + L G DGL R I L Sbjct: 195 DLPPIKYDLIVTNPPYVDAEDMADLPQEFR-FEPELGLAAGSDGLKLARRILACAPDFLQ 253 Query: 219 KDGLCSVEIG 228 DG+ E+G Sbjct: 254 DDGVLICEVG 263 >gi|32491158|ref|NP_871412.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] gi|25166365|dbj|BAC24555.1| yfcB [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] Length = 307 Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 46/148 (31%), Positives = 77/148 (52%), Gaps = 13/148 (8%) Query: 96 RDVVR-----ILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVSE 148 RD+++ ILD+ TG+G CL+++ + + DIS AL +AK N + Sbjct: 129 RDLIKFKPKNILDVCTGSG--CLSIIAAEVYSEAFIDASDISEGALNVAKFNIKKYNLQN 186 Query: 149 RFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSH 205 R + + SD FS++ +D+I+ NPPY+ +++ L E +P I L GG DGL Sbjct: 187 RINLVLSDLFSNIYFKSKKYDLIIINPPYVNKTVMNSLPKEFLH-EPEIGLFGGNDGLVL 245 Query: 206 YRTIADGVSRHLNKDGLCSVEIGYNQKV 233 R I + + L+ +G+ E+G N + Sbjct: 246 IRKILNESANFLSDNGVLVCEVGENMSI 273 >gi|161502470|ref|YP_001569583.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160863817|gb|ABX20440.1| hypothetical protein SARI_00514 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 310 Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 42/129 (32%), Positives = 68/129 (52%), Gaps = 2/129 (1%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 ILD+ TG+G + +A P + VDIS AL +A+ N +G+ ++SD F Sbjct: 136 ILDMCTGSGCIAIACAYAFPDAEVDAVDISPDALAVAEHNIEEHGLIHHVTPIRSDLFRD 195 Query: 161 VEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 + + +D+IV+NPPY+++ + L E R +P + L G DGL R I +L+ Sbjct: 196 LPKVQYDLIVTNPPYVDAEDMSDLPNEYR-HEPELGLASGTDGLKLTRRILGNAPDYLSD 254 Query: 220 DGLCSVEIG 228 G+ E+G Sbjct: 255 AGVLICEVG 263 >gi|71066011|ref|YP_264738.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Psychrobacter arcticus 273-4] gi|71038996|gb|AAZ19304.1| putative modification methylase HemK family protein [Psychrobacter arcticus 273-4] Length = 391 Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 44/133 (33%), Positives = 73/133 (54%), Gaps = 7/133 (5%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 RILDL TG+G C+A+ + F + VDI ALE+A N + + + + ++SD Sbjct: 209 RILDLCTGSG--CIAIGLATRFVDALVDAVDIDKGALEVAMVNVDHHDLGHQVNVIESDL 266 Query: 158 FSSV--EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215 F+ + E +++IV+NPPY+++ I+ L E ++P +L G DGL I Sbjct: 267 FAKIPAEHQYELIVTNPPYVDAAIMADLPPEFL-YEPEHALAAGQDGLDLVHRILFEAPD 325 Query: 216 HLNKDGLCSVEIG 228 +L+ +GL E+G Sbjct: 326 YLSPEGLLVCEVG 338 >gi|238785988|ref|ZP_04629950.1| Uncharacterized adenine-specific methylase [Yersinia bercovieri ATCC 43970] gi|238713092|gb|EEQ05142.1| Uncharacterized adenine-specific methylase [Yersinia bercovieri ATCC 43970] Length = 314 Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 41/130 (31%), Positives = 66/130 (50%), Gaps = 2/130 (1%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ILD+ TG+G + +A P + VDIS L + + N + + + ++SD F Sbjct: 139 HILDMCTGSGCIAIACAYAFPEAEVDAVDISNDVLAVTEHNIEQHSMEHQVTPIRSDLFR 198 Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 + + +D+IV+NPPY+++ + L E R F+P + L G DGL R I L Sbjct: 199 DLPPIKYDLIVTNPPYVDAEDMADLPQEFR-FEPELGLAAGSDGLKLARRILACAPDFLQ 257 Query: 219 KDGLCSVEIG 228 DG+ E+G Sbjct: 258 DDGVLICEVG 267 >gi|238797449|ref|ZP_04640948.1| Uncharacterized adenine-specific methylase [Yersinia mollaretii ATCC 43969] gi|238718720|gb|EEQ10537.1| Uncharacterized adenine-specific methylase [Yersinia mollaretii ATCC 43969] Length = 312 Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 41/130 (31%), Positives = 66/130 (50%), Gaps = 2/130 (1%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ILD+ TG+G + +A P + VDIS L + + N + + + ++SD F Sbjct: 137 HILDMCTGSGCIAIACAYAFPEAEVDAVDISNDVLAVTEHNIEQHSMEHQVTPIRSDLFR 196 Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 + + +D+IV+NPPY+++ + L E R F+P + L G DGL R I L Sbjct: 197 DLPPIKYDLIVTNPPYVDAEDMADLPQEFR-FEPELGLAAGSDGLDLARRILACAPDFLQ 255 Query: 219 KDGLCSVEIG 228 DG+ E+G Sbjct: 256 DDGVLICEVG 265 >gi|293189724|ref|ZP_06608440.1| protein-(glutamine-N5) methyltransferase [Actinomyces odontolyticus F0309] gi|292821314|gb|EFF80257.1| protein-(glutamine-N5) methyltransferase [Actinomyces odontolyticus F0309] Length = 303 Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 60/237 (25%), Positives = 102/237 (43%), Gaps = 9/237 (3%) Query: 30 LDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFS 89 L++ Q L +A+ + I G F + L F RPETE+L A+ + Sbjct: 54 LNEDQAEKLRSAVGERALRIPLQHITGRMFFRGLTLAARPGVFVVRPETEVLAGLAIDEA 113 Query: 90 LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS-- 147 + + + R++DL G+GA+ LA+ E+ + V+ + +A N GV Sbjct: 114 MAVVARHGEARVVDLCAGSGAIGLAVATETTCTEVWAVEKEAEPFALACQNRDAVGVPCL 173 Query: 148 --ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVR-DFDPRISLDGG-IDGL 203 ER D + ++G+ DV+V+NPPY+ + D + + DP ++L GG DG Sbjct: 174 HLERGDATDPATLAHLDGMVDVVVTNPPYVPA---DEMPTQPEASADPHVALYGGSPDGT 230 Query: 204 SHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 +A L G+ +E +Q+ +V I + + D G R L Sbjct: 231 EIPARVARRALTLLRPGGVLLMEHSPSQEEAMVAIAAQLGMTDIATLPDLAGRRRFL 287 >gi|290475975|ref|YP_003468870.1| N5-glutamine methyltransferase, modifies ribosomal protein L3 [Xenorhabdus bovienii SS-2004] gi|289175303|emb|CBJ82106.1| N5-glutamine methyltransferase, modifies ribosomal protein L3 [Xenorhabdus bovienii SS-2004] Length = 312 Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 49/156 (31%), Positives = 78/156 (50%), Gaps = 6/156 (3%) Query: 74 PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133 PR LV++ A LP+ + ILDL TG+G + +A E P + VDIS A Sbjct: 115 PRSPIGELVNNQFAGLLPQ----EPSTILDLCTGSGCIAIACAHEFPEAEVDAVDISGDA 170 Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDP 192 L + + N +G+ R + SD F + + +D+IV+NPPY++ ++ L E +P Sbjct: 171 LAVTEQNIENHGLLNRVIPILSDLFRDMPPMKYDLIVTNPPYVDEEDMNDLPDEFLR-EP 229 Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228 + L G+DGL I L ++G+ E+G Sbjct: 230 ELGLAAGVDGLILACRILANAPDFLTEEGVLICEVG 265 >gi|238026889|ref|YP_002911120.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Burkholderia glumae BGR1] gi|237876083|gb|ACR28416.1| Methylase of polypeptide chain release factors [Burkholderia glumae BGR1] Length = 308 Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 50/156 (32%), Positives = 76/156 (48%), Gaps = 14/156 (8%) Query: 94 EKRDVVRILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVSERFD 151 + V +L+L TG+G CLA+L F VD+S AL +A+ N + R Sbjct: 128 DPEQVGAVLELCTGSG--CLAVLAAEAFPNAEIDAVDLSEDALAVAEINVADYRLDHRIA 185 Query: 152 TLQSDWFSSV--------EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203 D ++ + E +DVI+SNPPY+ + + L E R +P ++L GG DG+ Sbjct: 186 LHHGDLYAPLPAERLADPELRYDVILSNPPYVNAASMAALPDEYR-HEPEMALAGGDDGM 244 Query: 204 SHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 R I + L +DG+ VEIG N++ V F Sbjct: 245 DVVRRILREAKKWLKEDGVLVVEIG-NERPHVEAAF 279 >gi|317506167|ref|ZP_07963988.1| protein-(glutamine-N5) methyltransferase [Segniliparus rugosus ATCC BAA-974] gi|316255512|gb|EFV14761.1| protein-(glutamine-N5) methyltransferase [Segniliparus rugosus ATCC BAA-974] Length = 297 Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 68/255 (26%), Positives = 101/255 (39%), Gaps = 15/255 (5%) Query: 17 LSSHQVIVDPDSV-----LDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDT 71 L++H + V P V L + QR +V+ + + +LG F +V + + Sbjct: 38 LAAHVLGVKPGFVWQVDSLSEEQREQFDWLVVQRSRRVPLQYLLGKVFFASVEVLVGPGV 97 Query: 72 FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131 F PRPETE L AL R+ + + DL +G+G++ L++ P V+ Sbjct: 98 FIPRPETEQLHVWALTALRARLWEIPEPVVFDLCSGSGSLGLSIAHSVPESAVTLVENDP 157 Query: 132 KALEIAKSNAVTNGVSERF-------DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184 KAL N S R D G D++V+NPPY+ S Sbjct: 158 KALVWTHKNVQAGASSGRAPVRVVEGDVTDQALLPDGAGTVDLVVANPPYVPSGTPTP-- 215 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 EV DFDP ++ G DGL + ++R L G VE V +F + Sbjct: 216 PEVADFDPPQAVFAGPDGLDVIVGLVGNIARWLKPGGAFGVEHDEGHADQVRALFAKEER 275 Query: 245 FL-VNAFKDYGGNDR 258 F V D G R Sbjct: 276 FREVKTMSDLAGRPR 290 >gi|37527075|ref|NP_930419.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Photorhabdus luminescens subsp. laumondii TTO1] gi|36786508|emb|CAE15564.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii TTO1] Length = 314 Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 54/192 (28%), Positives = 88/192 (45%), Gaps = 10/192 (5%) Query: 74 PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133 PR L+++ A +P ILDL TG+G + +A P + VDIS Sbjct: 117 PRSPIGELINNEFAGLIPE----QPANILDLCTGSGCIAIACAYAFPEAEIDAVDISADV 172 Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDP 192 L + + N + + R ++SD F + + +D+IV+NPPY+++ + L E R +P Sbjct: 173 LAVTEQNIQNHSLDHRVIPIRSDLFRDMPPVKYDLIVTNPPYVDAEDMSDLPEEFRR-EP 231 Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKD 252 + L G DGL R I L + G+ E+G N V ++ + + + Sbjct: 232 ELGLAAGSDGLKLARRILATAPNFLTERGVLICEVG-NSMVHLIEQYPDVPFTWLEF--E 288 Query: 253 YGGNDRVLLFCR 264 YGG D V + R Sbjct: 289 YGG-DGVFMLTR 299 >gi|332981031|ref|YP_004462472.1| 16S rRNA m(2)G 1207 methyltransferase [Mahella australiensis 50-1 BON] gi|332698709|gb|AEE95650.1| 16S rRNA m(2)G 1207 methyltransferase [Mahella australiensis 50-1 BON] Length = 201 Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 36/92 (39%), Positives = 56/92 (60%), Gaps = 1/92 (1%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 +D+ + L + R R+LD+G G GA+ +++ K + V VDI+ +A+E+A+ N Sbjct: 42 IDTGSSVLLNALPDRLSGRVLDMGCGYGAIGISIAKAYQDVEVVMVDINSRAVELAQGNI 101 Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173 N ++ QSD F+ VEGLFD+IVSNPP Sbjct: 102 KLNSINNA-TVYQSDGFAQVEGLFDIIVSNPP 132 >gi|317009682|gb|ADU80262.1| protoporphyrinogen oxidase (hemK) [Helicobacter pylori India7] Length = 276 Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 64/237 (27%), Positives = 103/237 (43%), Gaps = 31/237 (13%) Query: 31 DDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSL 90 ++ RFF + + L I +L DFY ++ PRPETE+LV AL Sbjct: 51 EEEVRFF--ELVEKRLNDCPIEYLLESCDFYGRSFFVNEHVLIPRPETEILVKKALDI-- 106 Query: 91 PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150 I + + I ++G G+ V ++L E+P D+S KALE+A N + ER Sbjct: 107 --ISQYHLKEIGEIGIGSACVSVSLALENPKLSIFASDVSLKALEVASKNIERFCLKERV 164 Query: 151 DTLQSDWFSSVEGLFDVIVSNPPYI------ESVIVDCLGLEVRDFDPRISLDGGIDG-- 202 Q+ + + + +++SNPPYI E ++ +P +L GG+ G Sbjct: 165 FLKQTHLWDRMPTI-QMLISNPPYIARGYPLEKSVLK---------EPHEALFGGVKGDE 214 Query: 203 -LSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258 L +A G+ K + E+GY+Q + E + +KD G DR Sbjct: 215 ILKEIILLAAGL-----KIPFLACEMGYDQLKSLKECLEFCG-YDAEFYKDLSGFDR 265 >gi|289706368|ref|ZP_06502726.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Micrococcus luteus SK58] gi|289556863|gb|EFD50196.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Micrococcus luteus SK58] Length = 300 Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 73/233 (31%), Positives = 103/233 (44%), Gaps = 20/233 (8%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101 + R E + + G F+ + L + F PRPETELLV++ +A L DVV Sbjct: 66 VGRRAAREPVQHLTGVAHFHGLDLAVGPGVFIPRPETELLVETVVA-DLAARPTADVV-- 122 Query: 102 LDLGTGTGAVCLAL-----LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 +DL TG+GA+ A+ + P V++ A + A+ N GV D Q D Sbjct: 123 VDLCTGSGAIAAAVAAWGEARGRPLAV-AAVELDPTAADWARRNLALRGV----DLRQGD 177 Query: 157 WFSS---VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG-IDGLSHYRTIADG 212 + +EG DV+VSNPPY+ V E R DP +L GG GL R IA Sbjct: 178 ALVACPDLEGRVDVVVSNPPYVPEAEVPAQ-PEAR-LDPARALYGGDAPGLRVPRAIAHR 235 Query: 213 VSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL-VNAFKDYGGNDRVLLFCR 264 + L GL ++E Q ++ + F V +D G DR L R Sbjct: 236 AADLLAPGGLFAMEHHETQGPALLAALGADPRFTGVRVHQDLTGRDRFLTARR 288 >gi|169628534|ref|YP_001702183.1| modification methylase HemK [Mycobacterium abscessus ATCC 19977] gi|169240501|emb|CAM61529.1| Probable modification methylase HemK [Mycobacterium abscessus] Length = 280 Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 50/177 (28%), Positives = 76/177 (42%), Gaps = 9/177 (5%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110 + ++G F + + + F PRPETE L A P +++L G+ A Sbjct: 68 LQHLVGSAAFGPIEVRVGPGVFIPRPETESLYAWAAGQLAPH------ATVVELCAGSAA 121 Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEGLFDVIV 169 + +AL + P + +++ AL + NA GV + D D + + G D+IV Sbjct: 122 LAIALAQHEPTARVTAIEVDVDALIYTRRNAEGTGVEVVQADVTSPDLLTELNGAVDLIV 181 Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE 226 +NPPYI L EV DP +L G DGL+ I R L G +E Sbjct: 182 ANPPYIPQDTE--LEPEVARHDPPQALFAGADGLAIIAPIVIAAGRLLAPGGAIGIE 236 >gi|296138964|ref|YP_003646207.1| modification methylase, HemK family [Tsukamurella paurometabola DSM 20162] gi|296027098|gb|ADG77868.1| modification methylase, HemK family [Tsukamurella paurometabola DSM 20162] Length = 280 Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 67/234 (28%), Positives = 99/234 (42%), Gaps = 31/234 (13%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L V G+ ++++ + +D Q + R E + ILG F + L Sbjct: 25 DAEVLLAHVLGVDRGRLVI---ADVDAAQAGEYEALVARRADREPLQHILGRAPFGPLDL 81 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR---ILDLGTGTGAVCLALLKESPFF 122 + F PRPETELL A R V R I+DL G+GA+ L L P Sbjct: 82 RVGPGVFVPRPETELLAVWA---------ARQVGRGAAIVDLCAGSGALGLYLAATVPAA 132 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF---------SSVEGLFDVIVSNPP 173 + V+ AL NA G++ R L D +++ G D++V NPP Sbjct: 133 RVALVERDPHALGYLNDNAA--GLAGRVTVLDRDVTAVGLDAEIEAALGGTVDLVVCNPP 190 Query: 174 YIESVIVDCLGLEVR-DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE 226 Y+ D L+V DP +L G DGL R++A +R L G ++E Sbjct: 191 YVP----DGAPLDVEAALDPAAALFSGPDGLDLIRSLAPLCTRLLRTGGAVAIE 240 >gi|254000255|ref|YP_003052318.1| methyltransferase small [Methylovorus sp. SIP3-4] gi|253986934|gb|ACT51791.1| methyltransferase small [Methylovorus sp. SIP3-4] Length = 331 Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 49/133 (36%), Positives = 67/133 (50%), Gaps = 15/133 (11%) Query: 55 LGWRD-----FYNVRLTLSS--DTFEPR-----PETELLVDSALAFSLPRIEKRDVVRIL 102 +GWR N RL L S T E P+T V + ++ R + V R + Sbjct: 98 MGWRSKVRVASLNGRLFLHSAYPTLEASSVFFGPDTYRFVRAVQQYAETR--QPTVRRAV 155 Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162 D+GTG+G +AL P + GVDI+ AL +A+ NA NG ER L SD V Sbjct: 156 DIGTGSGVGAIALAGLFPDAEVFGVDINPHALALARVNAAANGC-ERVQMLHSDLLRDVA 214 Query: 163 GLFDVIVSNPPYI 175 G FD+I++NPPY+ Sbjct: 215 GEFDLIIANPPYL 227 >gi|332088462|gb|EGI93580.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Shigella boydii 5216-82] Length = 310 Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 42/130 (32%), Positives = 68/130 (52%), Gaps = 2/130 (1%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ILD+ TG+G + + P + VDIS AL +A+ N +G+ ++SD F Sbjct: 135 HILDMCTGSGCIAIVCAYVFPDAEVDAVDISPDALAVAEQNIEEHGLIHNVIPIRSDLFR 194 Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 + + +D+IV+NPPY+++ + L E R +P + L G DGL R I + +L Sbjct: 195 DLPKVQYDLIVTNPPYVDAEDMSDLPNEYR-HEPELGLASGTDGLKLTRRILGNAADYLA 253 Query: 219 KDGLCSVEIG 228 DG+ E+G Sbjct: 254 DDGVLICEVG 263 >gi|296136206|ref|YP_003643448.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Thiomonas intermedia K12] gi|295796328|gb|ADG31118.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Thiomonas intermedia K12] Length = 316 Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 43/148 (29%), Positives = 74/148 (50%), Gaps = 10/148 (6%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 R+LD+ TG+G CLA+L + VD+S AL +A+ N + R + SD Sbjct: 140 RVLDMCTGSG--CLAILAALVWNDAQVDAVDLSADALAVAEINREAYALQHRLRLIASDL 197 Query: 158 FSSVEGL----FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213 ++S+ +D+++ NPPY+ + + L E R +P ++L GG DG+ R Sbjct: 198 WASLAAAPSQAYDLVLCNPPYVPAASMRALPEEYR-HEPEMALAGGADGMDLVRRFLHDA 256 Query: 214 SRHLNKDGLCSVEIGYNQKVDVVRIFES 241 HL+ G+ +E+G N++ F + Sbjct: 257 PAHLSARGIVVLEVG-NERAAFEAAFPT 283 >gi|238791933|ref|ZP_04635569.1| Uncharacterized adenine-specific methylase [Yersinia intermedia ATCC 29909] gi|238728564|gb|EEQ20082.1| Uncharacterized adenine-specific methylase [Yersinia intermedia ATCC 29909] Length = 314 Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 43/141 (30%), Positives = 72/141 (51%), Gaps = 3/141 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ILD+ TG+G + +A P + VDIS L + + N + + + ++SD F Sbjct: 139 HILDMCTGSGCIAIACAYAFPDAEVDAVDISNDVLAVTEHNIQQHEMEHQVTPIRSDLFR 198 Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 + + +D+IV+NPPY+++ + L E R F+P + L G DGL R I L Sbjct: 199 DLPPIKYDLIVTNPPYVDAEDMADLPQEFR-FEPELGLAAGSDGLKLARRILACAPDFLQ 257 Query: 219 KDGLCSVEIGYNQKVDVVRIF 239 DG+ E+G N V ++ ++ Sbjct: 258 DDGVLICEVG-NSMVHLMDLY 277 >gi|228469583|ref|ZP_04054576.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Porphyromonas uenonis 60-3] gi|228308933|gb|EEK17608.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Porphyromonas uenonis 60-3] Length = 302 Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 69/264 (26%), Positives = 110/264 (41%), Gaps = 17/264 (6%) Query: 7 SHSFLCRVTGLSSHQVIVDPD-SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 S L +T LS ++D L D + +L A+ R E I I+G F + L Sbjct: 37 SEMLLQHITKLSQTNYLLDRKVRQLSDTEATWLCQALERLTHDEPIQYIVGVAPFGSFDL 96 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 T+ PRPET L + LA P E R+LD+G G+ + + + E P + Sbjct: 97 TVGRGVLIPRPETAELCELILARH-PATEAPQ--RLLDVGCGSACIPIYIGSERPQWSLY 153 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--------LFDVIVSNPPYIES 177 +D S +AL A+ N GV+ + + D F+ +G +++VSNPPYI Sbjct: 154 AMDQSEQALGYAEQNVRQTGVAVQL--FRGDLFAWCQGKGIPAKLPPINLLVSNPPYIPE 211 Query: 178 VIVDCLGLEVRDFDPRISL-DGGIDGLSHYRTIADGVSRHLNKDGLCSV--EIGYNQKVD 234 + V +PR +L D L +YR + V + + ++ E + + Sbjct: 212 CDQATMRPNVLVGEPREALFVPDADPLRYYRALVALVPQIRSPQAPLTLYCETHHQLAHE 271 Query: 235 VVRIFESRKLFLVNAFKDYGGNDR 258 V + E KD G +R Sbjct: 272 VAALCEQAGAISSEVLKDLTGRER 295 >gi|237732363|ref|ZP_04562844.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Citrobacter sp. 30_2] gi|226907902|gb|EEH93820.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Citrobacter sp. 30_2] Length = 310 Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 43/141 (30%), Positives = 73/141 (51%), Gaps = 3/141 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ILD+ TG+G + +A P + VDIS AL + + N +G+ ++SD F Sbjct: 135 HILDMCTGSGCIAIACAYAFPEAEVDAVDISTDALAVTEHNIEEHGLIHHVTPIRSDLFR 194 Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 + + +D+IV+NPPY+++ + L E R +P + L G DGL R I +L+ Sbjct: 195 DLLKVQYDLIVTNPPYVDAEDMSDLPNEYR-HEPELGLASGSDGLKLTRRILGNAPDYLS 253 Query: 219 KDGLCSVEIGYNQKVDVVRIF 239 +G+ E+G N V ++ + Sbjct: 254 DNGILICEVG-NSMVHLIEQY 273 >gi|227832890|ref|YP_002834597.1| methylase of peptide chain release factor [Corynebacterium aurimucosum ATCC 700975] gi|262182621|ref|ZP_06042042.1| methylase of peptide chain release factor [Corynebacterium aurimucosum ATCC 700975] gi|227453906|gb|ACP32659.1| methylase of peptide chain release factor [Corynebacterium aurimucosum ATCC 700975] Length = 294 Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 57/232 (24%), Positives = 93/232 (40%), Gaps = 27/232 (11%) Query: 44 RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD------ 97 R E + ILG F + L F PRPETE+L D + F L ++ + Sbjct: 64 RREAREPLQHILGVAWFGALELEAGPGVFIPRPETEVLADWGVKF-LTKLNSGETTRFNS 122 Query: 98 -VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTL 153 V R++DL G+GA+ L + P + V+++ AL + N + + D Sbjct: 123 QVPRVVDLCAGSGALALYVAHYVPQAEVWAVELADAALAYIRRNVARHAPDLQLVQGDVT 182 Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD------GGIDGLSHYR 207 S+ ++ G D++++NPPY+ E D DP + D GG+DG+ Sbjct: 183 DSEILPALHGTVDLVLTNPPYVP---------ETPDLDPEVYQDPHEAVFGGVDGMETIT 233 Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL-VNAFKDYGGNDR 258 + ++ L G +E V + F + KD G R Sbjct: 234 AMIPTIAALLRPGGRVGIEHDDETSQQVQEALRAHGGFSDIEVLKDLTGTAR 285 >gi|317012846|gb|ADU83454.1| S-adenosylmethionine-dependent methyltransferase [Helicobacter pylori Lithuania75] Length = 276 Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 67/249 (26%), Positives = 103/249 (41%), Gaps = 39/249 (15%) Query: 32 DRQRFFLTNAIVRSLKHES----------------IHRILGWRDFYNVRLTLSSDTFEPR 75 ++R FL L HE I +LG DFY ++ PR Sbjct: 34 QKERVFLHAHAYLELNHEEEVHFFELVGKRLNDCPIEYLLGSCDFYGRSFFVNEHVLIPR 93 Query: 76 PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135 PETE+LV AL I + + I ++G G+ V ++L E+P DIS KALE Sbjct: 94 PETEILVQKALDI----ISQYHLKEIGEIGIGSACVSVSLALENPKLCIHASDISPKALE 149 Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYI------ESVIVDCLGLEVRD 189 +A N + ER Q+ + + + +++VSNPPYI E ++ Sbjct: 150 VALKNIERFNLKERVFLKQTHLWDRMP-IIEMLVSNPPYIARGYPLEKSVLK-------- 200 Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249 +P +L GG+ G + I ++ K E+GY+Q + E + Sbjct: 201 -EPHEALFGGVKGDEILKEIVFLAAK--LKIPFLVCEMGYDQLKSLKECLEFCG-YDAEF 256 Query: 250 FKDYGGNDR 258 +KD G DR Sbjct: 257 YKDLSGFDR 265 >gi|148253253|ref|YP_001237838.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Bradyrhizobium sp. BTAi1] gi|146405426|gb|ABQ33932.1| [LSU ribosomal protein L3P]-glutamine N5-methyltransferase [Bradyrhizobium sp. BTAi1] Length = 322 Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 45/134 (33%), Positives = 69/134 (51%), Gaps = 6/134 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 +LDL TG+G CLA+L F + VDIS AL +A N + ER + D F Sbjct: 159 VLDLCTGSG--CLAILASRHFPNAMIDAVDISKDALAVAAKNVADYDLGERISLHRGDLF 216 Query: 159 SSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217 + + + +D+I+SNPPY+++ + L E +P ++ DGG DGL I HL Sbjct: 217 APLSQRRYDLIISNPPYVDAEGMAGLPQEC-GAEPALAFDGGADGLDIIHRILGQARDHL 275 Query: 218 NKDGLCSVEIGYNQ 231 +G E+G ++ Sbjct: 276 TAEGGLLCEVGRDR 289 >gi|116671164|ref|YP_832097.1| HemK family modification methylase [Arthrobacter sp. FB24] gi|116611273|gb|ABK03997.1| modification methylase, HemK family [Arthrobacter sp. FB24] Length = 298 Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 63/214 (29%), Positives = 96/214 (44%), Gaps = 6/214 (2%) Query: 50 SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAF--SLPRIEKRDVVRILDLGTG 107 + I G F ++L + F PRPETE +V + + R++ R +++DLGTG Sbjct: 73 PLQHITGVAHFRYLQLAVGPGVFIPRPETESVVQLVIDWLGDRDRLQGRARPKVVDLGTG 132 Query: 108 TGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDV 167 +GA+ ++ E P + V+ S A A+ N GV+ L+ D G FDV Sbjct: 133 SGAIAGSIALEVPGAEVYAVEFSEFAHAWAERNLRPLGVTLLRGDLR-DALPEHNGTFDV 191 Query: 168 IVSNPPYIESVIVDCLGLEVRDFDPRISL-DGGIDGLSHYRTIADGVSRHLNKDGLCSVE 226 +VSNPPYI + + EV DP +L GG DG+ A +R L G +E Sbjct: 192 VVSNPPYIPAEAIPNE-PEVALHDPPEALYGGGADGMELPTAAAASAARLLVPGGYFVME 250 Query: 227 IGYNQKVDVVRIFESRKLFL-VNAFKDYGGNDRV 259 Q + + + L+ V D G +R Sbjct: 251 HAEVQATWIAAMMKKSGLWSDVTTHLDLNGRERA 284 >gi|78369416|ref|NP_001030385.1| hemK methyltransferase family member 1 [Bos taurus] gi|74354715|gb|AAI02829.1| HemK methyltransferase family member 1 [Bos taurus] Length = 321 Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 66/223 (29%), Positives = 104/223 (46%), Gaps = 13/223 (5%) Query: 46 LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSL--PRIEKRDV-VRIL 102 L+ + ILG DF + L ++ F PRPETE LV+ L PR+ + IL Sbjct: 98 LQRMPVQYILGEWDFQGLNLKMAPPVFIPRPETEELVEWVLEEVTQGPRVVGAEGGPLIL 157 Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER-----FD-TLQSD 156 ++G G+GA+ L+LL P + VD A+ + NA + +R FD TL Sbjct: 158 EVGCGSGAISLSLLSRLPQSRVTAVDKGEAAICLTHENAQRLRLQDRIQIVPFDVTLVES 217 Query: 157 WFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215 W + G D++VSNPPY+ ++ L E+ ++ ++LDGG +G+ I + Sbjct: 218 WAHLLPWGPVDLVVSNPPYVFHRDMENLAPEILRYEDPVALDGGEEGMDIITHILALAPQ 277 Query: 216 HLNKDGLCSVEIGYNQKVDVVRIFESR---KLFLVNAFKDYGG 255 L G +E+ V +S+ L LV +D+ G Sbjct: 278 LLKDSGSIFLEVDPRHPELVGSWLQSQPDLPLNLVAVRRDFRG 320 >gi|156933075|ref|YP_001436991.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Cronobacter sakazakii ATCC BAA-894] gi|156531329|gb|ABU76155.1| hypothetical protein ESA_00885 [Cronobacter sakazakii ATCC BAA-894] Length = 338 Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 41/130 (31%), Positives = 66/130 (50%), Gaps = 2/130 (1%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ILD+ TG+G + +A P + VDIS AL + + N +G+ ++SD F Sbjct: 163 HILDMCTGSGCIAIACAYAFPNAEVDAVDISADALAVTEHNIEEHGLIHHVTPIRSDLFR 222 Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 + + +D+IV+NPPY++ + L E R +P + L G DGL R I +L Sbjct: 223 DLPKVQYDIIVTNPPYVDEEDMSDLPNEYR-HEPELGLAAGSDGLKLARRILACSPDYLT 281 Query: 219 KDGLCSVEIG 228 +G+ E+G Sbjct: 282 DNGILICEVG 291 >gi|288800422|ref|ZP_06405880.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Prevotella sp. oral taxon 299 str. F0039] gi|288332635|gb|EFC71115.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Prevotella sp. oral taxon 299 str. F0039] Length = 281 Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 62/218 (28%), Positives = 96/218 (44%), Gaps = 11/218 (5%) Query: 16 GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75 LS ++ + D+ L Q+ L + L E + +L F + S PR Sbjct: 33 NLSFTDILCNKDTQLSKEQQHKLQKITEQLLLGEPVQYVLQQAWFAGSWFKVHSGVLIPR 92 Query: 76 PETELLVDSALAFSLPRIEKRDVVRILDLGTGTG--AVCLALLKESPFFKGVGVDISCKA 133 PETE L P + +ILD+GTG+G A+ L+LL ++ + DI+ +A Sbjct: 93 PETEDLC--YWIAEQPTLSSLSNPKILDIGTGSGCIAITLSLLIKNA--QTTAWDIAPEA 148 Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVDCLGLEVRDFD 191 L +AK NA VS + ++ D ++ +D+IVSNPPYI + V F+ Sbjct: 149 LSLAKENAKAMNVS--IEVVEQDALNAPCDNEKWDIIVSNPPYITPQEQSEMEANVLQFE 206 Query: 192 PRISLDGGIDG-LSHYRTIADGVSRHLNKDGLCSVEIG 228 P +L D L Y+ I + L + G EI Sbjct: 207 PNCALFVPEDNPLIFYKAITHYAQKALVQGGTLFFEIN 244 >gi|332673874|gb|AEE70691.1| protoporphyrinogen oxidase [Helicobacter pylori 83] Length = 276 Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 65/248 (26%), Positives = 101/248 (40%), Gaps = 39/248 (15%) Query: 33 RQRFFLTNAIVRSLKHESIHRILGWR----------------DFYNVRLTLSSDTFEPRP 76 ++R FL L HE R W DFY ++ PRP Sbjct: 35 KERVFLHTHAYLELNHEEEARFFEWVEKRLNDCPIEYLLESCDFYGRSFFVNEHVLIPRP 94 Query: 77 ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136 ETE+LV AL I + + I ++G G+ V ++L E+P DIS KALE+ Sbjct: 95 ETEILVKKALDI----ISQYHLKEIGEIGIGSACVSVSLALENPKISIHASDISPKALEV 150 Query: 137 AKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYI------ESVIVDCLGLEVRDF 190 A N + ER ++ + + + ++VSNPPYI E ++ Sbjct: 151 ASKNIERFCLKERIFLKKTHLWDRMPTI-QMLVSNPPYIARGYPLEKSVLK--------- 200 Query: 191 DPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAF 250 +P +L GG+ G + I + K + E+GY+Q + E + + Sbjct: 201 EPHEALFGGVKGDEILKEIIFLAAE--LKIPFLACEMGYDQLKSLKECLEFCG-YDAEFY 257 Query: 251 KDYGGNDR 258 KD+ G DR Sbjct: 258 KDWSGFDR 265 >gi|291393746|ref|XP_002713409.1| PREDICTED: HemK methyltransferase family member 1-like [Oryctolagus cuniculus] Length = 350 Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 66/228 (28%), Positives = 103/228 (45%), Gaps = 13/228 (5%) Query: 46 LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPR---IEKRDVVRIL 102 L+ + ILG DF + L ++ F PRPETE LV+ L R + IL Sbjct: 116 LQRMPVQYILGEWDFQGLNLKMAPPVFIPRPETEELVEWVLEEVAQRPCAAGAQGGPLIL 175 Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD------TLQSD 156 ++G G+GA+ L+LL + + + VD A+ + NA + +R TL+ Sbjct: 176 EVGCGSGAIALSLLSQLLESRVIAVDREEAAICLTHENAQRLQLQDRIWIVPLDVTLEGS 235 Query: 157 WFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215 W + G D++VSNPPY+ ++ L E+ ++ +LDGG +G+ I R Sbjct: 236 WTHLLPWGPVDLVVSNPPYVFHQDMEQLAPEILSYEDAAALDGGKEGMDLITHILSLAPR 295 Query: 216 HLNKDGLCSVEIGYNQKVDVVRIFESRK---LFLVNAFKDYGGNDRVL 260 L G +E+ V +SR L LV +D+ G R L Sbjct: 296 LLKDSGSIFLEVDPRHPELVSSWLQSRPGLSLSLVAVRRDFCGRPRFL 343 >gi|134102727|ref|YP_001108388.1| putative methyltransferase [Saccharopolyspora erythraea NRRL 2338] gi|291007816|ref|ZP_06565789.1| putative methyltransferase [Saccharopolyspora erythraea NRRL 2338] gi|133915350|emb|CAM05463.1| putative methyltransferase [Saccharopolyspora erythraea NRRL 2338] Length = 291 Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 68/245 (27%), Positives = 102/245 (41%), Gaps = 22/245 (8%) Query: 23 IVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLV 82 +VDP V + L + R K + + G V L + F PRPETELL+ Sbjct: 49 LVDPPVVRE------LEELVRRRAKRVPLQHLTGTAHLGGVTLNVGPGVFVPRPETELLL 102 Query: 83 DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA- 141 LA E + ++DL +G+GA+ LA+ P V++ AL + NA Sbjct: 103 AWGLALL----EGVESPTVVDLCSGSGALALAVAHARPDAAVYAVEVGPAALSWVRRNAD 158 Query: 142 --VTNGVSE----RFDTLQSDWFSSVEGLFDVIVSNPPYI-ESVIVDCLGLEVRDFDPRI 194 V G + D ++G D+++ NPPY+ E V EVRD DP Sbjct: 159 QQVAAGDTPIRLYAGDVTDPTLLMDLDGTVDLVLCNPPYVPEGTPVPP---EVRDHDPHE 215 Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL-VNAFKDY 253 ++ GG DGL R + +R L G ++E V + +R++ V D Sbjct: 216 AVFGGRDGLDVVRHVVGCAARLLRPGGGVAIEHDDTHGGSVPALLSARRVLTDVEDHTDL 275 Query: 254 GGNDR 258 G R Sbjct: 276 AGRPR 280 >gi|297243817|ref|ZP_06927747.1| methylase of polypeptide chain release factors [Gardnerella vaginalis AMD] gi|296888238|gb|EFH26980.1| methylase of polypeptide chain release factors [Gardnerella vaginalis AMD] Length = 332 Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 61/224 (27%), Positives = 103/224 (45%), Gaps = 32/224 (14%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNA------IVRSLKHESIHRILGWRD 59 D+ L + G+S ++ + +L D F L A + R E + I+G Sbjct: 26 DARLLLAKACGISLAEL--NKALILGDLTDFSLDYASEYSDFVSRRASREPLQHIVGRAP 83 Query: 60 FYNVRLTLSSDTFEPRPETELLVDSALAF-SLPRIEKRDVVRILDLGTGTGAVCLALLKE 118 F + L + F PRPETE++VD+ L + I K VV DL G+GA+ L++ E Sbjct: 84 FRYLDLRIGKGVFVPRPETEVVVDAGLDWLRESHISKPTVV---DLCAGSGAIGLSIATE 140 Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNG-------VSERFDTLQSDW-----------FSS 160 + V+ S +A + + N +S R+ + +D + Sbjct: 141 VADAQVWAVEKSPEAFQYLRKNFEETAKNYENMQISSRYHAVLADATKAHISDLTPELHA 200 Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG-IDGL 203 + G D++++NPPY+ V +EVR++DP ++L GG +DGL Sbjct: 201 ICGKVDLVITNPPYVPENQVP-EQIEVREYDPPLALYGGSVDGL 243 >gi|154509272|ref|ZP_02044914.1| hypothetical protein ACTODO_01797 [Actinomyces odontolyticus ATCC 17982] gi|153798906|gb|EDN81326.1| hypothetical protein ACTODO_01797 [Actinomyces odontolyticus ATCC 17982] Length = 303 Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 60/237 (25%), Positives = 102/237 (43%), Gaps = 9/237 (3%) Query: 30 LDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFS 89 L++ Q L +A+ + I G F + L F RPETE+L A+ + Sbjct: 54 LNEDQAEKLRSAVGERALRIPLQHITGRMFFRGLTLAARPGVFVVRPETEVLAGLAIDEA 113 Query: 90 LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS-- 147 + + + R++DL G+GA+ LA+ E+ + V+ + +A N GV Sbjct: 114 MAVVARHGEARVVDLCAGSGAIGLAVATETTCTEVWAVEKEAEPFALACQNRDAVGVPCL 173 Query: 148 --ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVR-DFDPRISLDGG-IDGL 203 ER D + ++G+ DV+V+NPPY+ + D + + DP ++L GG DG Sbjct: 174 HLERGDATDPATLAHLDGMVDVVVTNPPYVPA---DEMPTQPEASADPHVALYGGSPDGT 230 Query: 204 SHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 +A L G+ +E +Q+ +V I + + D G R L Sbjct: 231 EIPARVARRALTLLRPGGVLLMEHSPSQEEAMVAIAAQLGMTDIATLPDLTGRRRFL 287 >gi|260598751|ref|YP_003211322.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Cronobacter turicensis z3032] gi|260217928|emb|CBA32526.1| Uncharacterized adenine-specific methylase yfcB [Cronobacter turicensis z3032] Length = 310 Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 41/130 (31%), Positives = 66/130 (50%), Gaps = 2/130 (1%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ILD+ TG+G + +A P + VDIS AL + + N +G+ ++SD F Sbjct: 135 HILDMCTGSGCIAIACAYAFPNAEVDAVDISTDALAVTEHNIEEHGLIHHVTPIRSDLFR 194 Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 + + +D+IV+NPPY++ + L E R +P + L G DGL R I +L Sbjct: 195 DLPKVQYDIIVTNPPYVDEEDMSDLPNEYR-HEPELGLAAGSDGLKLARRILACSPDYLT 253 Query: 219 KDGLCSVEIG 228 +G+ E+G Sbjct: 254 DNGILICEVG 263 >gi|208434969|ref|YP_002266635.1| S-adenosyl methionine-dependent methyltransferase [Helicobacter pylori G27] gi|208432898|gb|ACI27769.1| S-adenosyl methionine-dependent methyltransferase [Helicobacter pylori G27] Length = 274 Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 46/145 (31%), Positives = 71/145 (48%), Gaps = 7/145 (4%) Query: 31 DDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSL 90 ++ RFF + + L I +L DFY ++ PRPETE+LV AL Sbjct: 51 EEEARFF--ELVEKRLNDCPIEYLLESCDFYGRSFFVNEHVLIPRPETEILVQKALDI-- 106 Query: 91 PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150 I + + I ++G G+ V ++L E+P DIS KALE+A N + ER Sbjct: 107 --ISQYHLKEIGEIGIGSACVSVSLALENPKLSIHASDISLKALEVASKNIERFNLKERV 164 Query: 151 DTLQSDWFSSVEGLFDVIVSNPPYI 175 Q+ + + + +++VSNPPYI Sbjct: 165 FLKQTHLWDRMPTI-EMLVSNPPYI 188 >gi|302545563|ref|ZP_07297905.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptomyces hygroscopicus ATCC 53653] gi|302463181|gb|EFL26274.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptomyces himastatinicus ATCC 53653] Length = 270 Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 51/172 (29%), Positives = 82/172 (47%), Gaps = 7/172 (4%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110 + +LGW +F +R+++ + F PR TE LV+ A A + ++DL G+GA Sbjct: 58 LEHVLGWAEFRGLRISVDAGVFVPRRRTEFLVERAAAVAR------AGAVVVDLCCGSGA 111 Query: 111 VCLALLKE-SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIV 169 + AL+ E + DI A+ A+ N G + L +++ G DV++ Sbjct: 112 LGAALVAELGGRAEWYAADIDPAAVRCARRNVEPAGGAVFEGDLYEPLPAALRGRVDVLL 171 Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221 +N PY+ + V L E R + R++LDGG DGL R + G L G Sbjct: 172 ANVPYVPTEEVGLLPPEARVHEARVALDGGADGLDVLRRVTAGAPGWLAPGG 223 >gi|300858257|ref|YP_003783240.1| methylase of peptide chain release factors [Corynebacterium pseudotuberculosis FRC41] gi|300685711|gb|ADK28633.1| methylase of peptide chain release factors [Corynebacterium pseudotuberculosis FRC41] gi|302205978|gb|ADL10320.1| Putative protein-(glutamine-N5) methyltransferase, release factor-specific [Corynebacterium pseudotuberculosis C231] gi|302330531|gb|ADL20725.1| Putative protoporphyrinogen oxidase HemK [Corynebacterium pseudotuberculosis 1002] gi|308276213|gb|ADO26112.1| methylase of peptide chain release factors [Corynebacterium pseudotuberculosis I19] Length = 272 Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 57/218 (26%), Positives = 97/218 (44%), Gaps = 10/218 (4%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101 + R + E + I+G F + L + F PRPETE+L D +++ ++ + V Sbjct: 56 VARRAQREPLQHIIGKAWFGPLILKVGPGVFIPRPETEVLAD----WAVQQLSGGETV-- 109 Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 +DL TG+GA+ + P K V++S A A+ N + D + + Sbjct: 110 VDLCTGSGALAAYVATLVPTTKVTAVELSPSAAHYAQENLPPSVNLIIGDATDPNVLRPL 169 Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221 G DV+VSNPPY+ L EV +DP +++ G DG+ + + + L G Sbjct: 170 MGTVDVLVSNPPYVPE--TPDLTPEVY-YDPAMAVFSGKDGMDMIKLLIPVIHELLAPHG 226 Query: 222 LCSVEIGYNQKVDVVRIFESRKLF-LVNAFKDYGGNDR 258 +E + V++ F + F + KD G +R Sbjct: 227 RVGIEHDDATSLAVLQEFRAHGGFEEITVVKDLTGRNR 264 >gi|253988907|ref|YP_003040263.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253780357|emb|CAQ83518.1| conserved hypothetical protein [Photorhabdus asymbiotica] Length = 310 Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 49/165 (29%), Positives = 79/165 (47%), Gaps = 6/165 (3%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 ILDL TG+G + +A P + VDIS L + + N + + R ++SD F Sbjct: 136 ILDLCTGSGCIAIACAYAFPEAEVDAVDISADVLVVTEQNIQNHNLEHRVIPIRSDLFRD 195 Query: 161 VEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 + + +D+IV+NPPY+++ + L E R +P + L G DGL R I L + Sbjct: 196 MPPVKYDLIVTNPPYVDAEDMSDLPEEFR-CEPELGLAAGSDGLKLARRILATAPDFLTE 254 Query: 220 DGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 G+ E+G N V ++ + + +YGG D V + R Sbjct: 255 QGILICEVG-NSMVHLIEQYPDVPFTWLEF--EYGG-DGVFMLTR 295 >gi|237713238|ref|ZP_04543719.1| conserved hypothetical protein [Bacteroides sp. D1] gi|262406622|ref|ZP_06083171.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|294646172|ref|ZP_06723828.1| methyltransferase domain protein [Bacteroides ovatus SD CC 2a] gi|294807858|ref|ZP_06766640.1| methyltransferase domain protein [Bacteroides xylanisolvens SD CC 1b] gi|229446705|gb|EEO52496.1| conserved hypothetical protein [Bacteroides sp. D1] gi|262355325|gb|EEZ04416.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|292638501|gb|EFF56863.1| methyltransferase domain protein [Bacteroides ovatus SD CC 2a] gi|294444920|gb|EFG13605.1| methyltransferase domain protein [Bacteroides xylanisolvens SD CC 1b] Length = 236 Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 59/162 (36%), Positives = 81/162 (50%), Gaps = 16/162 (9%) Query: 100 RILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW- 157 RILD+GTGTG V L L + S P K V ++I A E A+ N + ER + +Q+D+ Sbjct: 40 RILDIGTGTGLVALMLAQRSLPDAKIVALEIDEAAAEQARENVARSPWQERIEVVQADFK 99 Query: 158 -FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216 + S + FDVIVSNPPY VD L D + + D L+ Y + +GV+R Sbjct: 100 KYRSSDK-FDVIVSNPPY----FVDSLECP----DRQRAAARHNDSLT-YEELLEGVNRL 149 Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRKLFLV---NAFKDYGG 255 L DGL +V I + V I KL+ + N GG Sbjct: 150 LAADGLFTVVIPTDVVDRVKAIASMNKLYAIRQLNVITKPGG 191 >gi|323144315|ref|ZP_08078930.1| (glutamine-N5) methyltransferase, ribosomal protein L3-specific [Succinatimonas hippei YIT 12066] gi|322415906|gb|EFY06625.1| (glutamine-N5) methyltransferase, ribosomal protein L3-specific [Succinatimonas hippei YIT 12066] Length = 333 Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 49/162 (30%), Positives = 85/162 (52%), Gaps = 11/162 (6%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGV----GVDISCKALEIAKSNAVTNGVSERFDTLQS 155 R+LD+ TG+G + +A+ + F G VDIS +ALE+A+ N G+ ++S Sbjct: 157 RVLDMCTGSGCIAIAI---ALHFDGDCEVDAVDISEEALEVAEINIRGYGLENCVFPIKS 213 Query: 156 DWFSSVEG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213 D FS++ +D+IV+NPPY+++ + + E + +P ++L G DGL R I Sbjct: 214 DLFSALPKGDKYDLIVANPPYVDAYDLSTMPKEF-EAEPELALGSGEDGLDCARKILAQA 272 Query: 214 SRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGG 255 +L+ DG+ +E+G N ++ F ++ K GG Sbjct: 273 VDYLSDDGVLIMEVG-NSAENLNDAFPHVPFHFIDLKKGGGG 313 >gi|283832238|ref|ZP_06351979.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Citrobacter youngae ATCC 29220] gi|291071879|gb|EFE09988.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Citrobacter youngae ATCC 29220] Length = 310 Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 43/141 (30%), Positives = 72/141 (51%), Gaps = 3/141 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ILD+ TG+G + +A P + VDIS AL + + N +G+ ++SD F Sbjct: 135 HILDMCTGSGCIAIACAYAFPEAEVDAVDISTDALAVTEHNIEEHGLIHHVTPIRSDLFR 194 Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 + + +D+IV+NPPY+++ + L E R +P + L G DGL R I +L Sbjct: 195 DLLKVQYDLIVTNPPYVDAEDMSDLPNEYR-HEPELGLASGSDGLKLTRRILGNAPDYLA 253 Query: 219 KDGLCSVEIGYNQKVDVVRIF 239 +G+ E+G N V ++ + Sbjct: 254 DNGILICEVG-NSMVHLIEQY 273 >gi|229168050|ref|ZP_04295779.1| Modification methylase, HemK [Bacillus cereus AH621] gi|228615416|gb|EEK72512.1| Modification methylase, HemK [Bacillus cereus AH621] Length = 258 Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 61/195 (31%), Positives = 92/195 (47%), Gaps = 8/195 (4%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110 + ++G+ +F +R+ + F PR TE LV A S R I+DL G+GA Sbjct: 49 LEYVVGYTEFCGLRIEVDRGVFVPRKRTEFLVHQTEALS------RSSDIIVDLCCGSGA 102 Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFSSVEGLFDVIV 169 V AL + VDI A++ A N VTN F+ L S++G +++V Sbjct: 103 VGAALAAALGRVELYSVDIDPIAVQCASRN-VTNFGGHAFEGDLYKALPDSLKGHVNILV 161 Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY 229 +N PY+ + I+ L E R ++P ++LDGG DGL+ R +A+ L DG +E Sbjct: 162 ANVPYVPTEIIKFLPREARLYEPHVTLDGGEDGLNILRRVAEEALLWLALDGHLLIETSE 221 Query: 230 NQKVDVVRIFESRKL 244 Q IF L Sbjct: 222 VQAPQAFEIFAGAGL 236 >gi|294340442|emb|CAZ88823.1| putative Site-specific DNA-methyltransferase (adenine-specific) [Thiomonas sp. 3As] Length = 316 Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 43/148 (29%), Positives = 74/148 (50%), Gaps = 10/148 (6%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 R+LD+ TG+G CLA+L + VD+S AL +A+ N + R + SD Sbjct: 140 RVLDMCTGSG--CLAILAALVWDDAQVDAVDLSADALAVAEINREAYALQHRLRLVASDL 197 Query: 158 FSSVEGL----FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213 ++S+ +D+++ NPPY+ + + L E R +P ++L GG DG+ R Sbjct: 198 WASLAAAPSQAYDLVLCNPPYVPTASMRALPEEYR-HEPEMALAGGADGMDLVRRFLHDA 256 Query: 214 SRHLNKDGLCSVEIGYNQKVDVVRIFES 241 HL+ G+ +E+G N++ F + Sbjct: 257 PAHLSARGIVVLEVG-NERAAFEAAFPT 283 >gi|237808925|ref|YP_002893365.1| modification methylase, HemK family [Tolumonas auensis DSM 9187] gi|237501186|gb|ACQ93779.1| modification methylase, HemK family [Tolumonas auensis DSM 9187] Length = 311 Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 44/147 (29%), Positives = 76/147 (51%), Gaps = 4/147 (2%) Query: 95 KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154 + + RI+DL TG+G + +A+ P + +D+S AL + + N +G+ + + Sbjct: 130 QHEPTRIMDLCTGSGCIAIAMAHTFPAAEVDALDLSEDALAVCEMNIEMHGMLGQVIPIC 189 Query: 155 SDWFSSVEG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212 SD F ++ +D+IVSNPPY++ + L E +P ++L G DGL R I Sbjct: 190 SDLFDALPAGDKYDLIVSNPPYVDVEDMSDLPEEFH-HEPEMALAAGDDGLDLVRRILAE 248 Query: 213 VSRHLNKDGLCSVEIGYNQKVDVVRIF 239 L ++G+ VE+G N V + +F Sbjct: 249 AGELLKENGVLVVEVG-NSMVHLAALF 274 >gi|28493401|ref|NP_787562.1| protoporphyrinogen oxidase [Tropheryma whipplei str. Twist] gi|28572488|ref|NP_789268.1| peptide chain release factor methyltransferase [Tropheryma whipplei TW08/27] gi|28410620|emb|CAD67006.1| putative peptide chain release factor methyltransferase [Tropheryma whipplei TW08/27] gi|28476442|gb|AAO44531.1| protoporphyrinogen oxidase [Tropheryma whipplei str. Twist] Length = 285 Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 61/207 (29%), Positives = 97/207 (46%), Gaps = 18/207 (8%) Query: 60 FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR-ILDLGTGTGAVCLALLKE 118 FY + + PRPETE+LV L ++R + DLGTGTG + LAL Sbjct: 79 FYEHDILVGPGALVPRPETEILVQRVLT---ELCTTGTLIRSVWDLGTGTGCITLALASR 135 Query: 119 SPFFKGVGVDISCKALEIAKSNA--VTNGVSERFD-TLQSDWFSSVE--GLFDVIVSNPP 173 + + + VD S A++ A+ N + N + D T+ SD + + G DV+V+NPP Sbjct: 136 ATDIEYLAVDKSNSAIQWAEKNLRHLRNVTIRKADFTVDSDLLALLSEFGPPDVVVANPP 195 Query: 174 YIESVIVDCLGLEVRDFDPRISL-DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232 Y+ ++ ++P ++L GG +GL R +A S L GL +E +Q Sbjct: 196 YLPQSVMH------EKYEPYMALCGGGPEGLDLLRAVARASSIVLANSGLLFLEHLPDQS 249 Query: 233 VDVVRIFESRKLFLVNAFKDYGGNDRV 259 + E+ + +F D NDR+ Sbjct: 250 QSLRVSLEAMGFCDIESFCDL--NDRL 274 >gi|313202221|ref|YP_004040879.1| methyltransferase small [Methylovorus sp. MP688] gi|312441537|gb|ADQ85643.1| methyltransferase small [Methylovorus sp. MP688] Length = 331 Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 42/133 (31%), Positives = 66/133 (49%), Gaps = 15/133 (11%) Query: 55 LGWRD------------FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRIL 102 +GWR ++ TL + + P+T + + ++ R + V R + Sbjct: 98 MGWRSKVRVASLNGQLFLHSAYPTLEASSVFFGPDTYRFIRAVQQYAQTR--QPTVRRAV 155 Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162 D+GTG+G +AL P + GVDI+ AL +A+ NA NG ER + SD V Sbjct: 156 DIGTGSGVGAIALAGLFPDAEVFGVDINPHALALARVNAAANGC-ERVQMVHSDLLQDVA 214 Query: 163 GLFDVIVSNPPYI 175 G FD+I++NPPY+ Sbjct: 215 GEFDLIIANPPYL 227 >gi|326771964|ref|ZP_08231249.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Actinomyces viscosus C505] gi|326638097|gb|EGE38998.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Actinomyces viscosus C505] Length = 301 Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 51/169 (30%), Positives = 80/169 (47%), Gaps = 10/169 (5%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD-VVR 100 ++R E + I+G L F RPETE++ +A+ + ++ VV Sbjct: 75 VLRRECREPLQHIIGRMWLRGAELISRPGVFIVRPETEVVAGAAIEAAREVMDGGGGVVL 134 Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW--- 157 DL TG+GA+ + KE P + V V+IS A +A+ N V R + + +D Sbjct: 135 TADLCTGSGAIAACVAKEVPGARVVAVEISETAASLAREN-CERLVPGRVEVIHADATDP 193 Query: 158 --FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL-DGGIDGL 203 + G DV+VSNPPY+ + V+ E +P ++L GG DGL Sbjct: 194 LVLHDLNGQIDVVVSNPPYVPAGAVE--DTETEQHEPTVALYGGGPDGL 240 >gi|296474810|gb|DAA16925.1| HemK methyltransferase family member 1 [Bos taurus] Length = 321 Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 66/223 (29%), Positives = 103/223 (46%), Gaps = 13/223 (5%) Query: 46 LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSL--PRIEKRDV-VRIL 102 L+ + ILG DF + L ++ F PRPETE LV+ L PR+ + IL Sbjct: 98 LQRMPVQYILGEWDFQGLNLKMAPPVFIPRPETEELVEWVLEEVTQGPRVVGAEGGPLIL 157 Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER-----FD-TLQSD 156 ++G G+GA+ L+LL P + VD A+ + NA + R FD TL Sbjct: 158 EVGCGSGAISLSLLSRLPQSRVTAVDKGEAAICLTHENAQRLRLQARIQIVTFDVTLVES 217 Query: 157 WFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215 W + G D++VSNPPY+ ++ L E+ ++ ++LDGG +G+ I + Sbjct: 218 WAHLLPWGPVDLVVSNPPYVFHRDMENLAPEILRYEDPVALDGGEEGMDIITHILALAPQ 277 Query: 216 HLNKDGLCSVEIGYNQKVDVVRIFESR---KLFLVNAFKDYGG 255 L G +E+ V +S+ L LV +D+ G Sbjct: 278 LLKDSGSIFLEVDPRHPELVGSWLQSQPDLPLNLVAVRRDFRG 320 >gi|207091970|ref|ZP_03239757.1| protoporphyrinogen oxidase (hemK) [Helicobacter pylori HPKX_438_AG0C1] Length = 242 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 63/234 (26%), Positives = 101/234 (43%), Gaps = 25/234 (10%) Query: 31 DDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSL 90 ++ RFF + + L I +L DFY ++ PRPETE+LV L Sbjct: 19 EEEMRFF--ELVEKRLNDCPIEYLLESCDFYGRSFFVNEHVLIPRPETEILVQKTLDI-- 74 Query: 91 PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150 I + + I ++G G+ V ++L E+P DIS KALE+A N + ER Sbjct: 75 --ISQYHLKEIGEIGIGSACVSVSLALENPKISIHASDISLKALEVASKNIERFNLKERV 132 Query: 151 DTLQSDWFSSVEGLFDVIVSNPPYI------ESVIVDCLGLEVRDFDPRISLDGGIDGLS 204 Q+ + + + +++VSNPPYI E ++ +P +L GG+ G Sbjct: 133 FLKQTHLWDRMPTI-EMLVSNPPYIARGYPLEKSVLK---------EPHKALFGGVKGDE 182 Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258 + I + K + E+GY+Q + E + +KD G DR Sbjct: 183 ILKEIILLAAE--LKIPFLACEMGYDQLKSLKECLEFCG-YDAEFYKDLSGFDR 233 >gi|261838406|gb|ACX98172.1| s-adenosylmethionine-dependent methyltransferase [Helicobacter pylori 51] Length = 276 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 63/248 (25%), Positives = 101/248 (40%), Gaps = 39/248 (15%) Query: 33 RQRFFLTNAIVRSLKHESIHRILGWR----------------DFYNVRLTLSSDTFEPRP 76 ++R FL L HE R W DFY ++ PRP Sbjct: 35 KERVFLHTHAYLELNHEEEARFFEWVGKRLNDCPIEYLLESCDFYGRSFFVNEHVLIPRP 94 Query: 77 ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136 ETE+LV AL I + + I ++G G+ V ++L E+P D+S KALE+ Sbjct: 95 ETEILVKKALDI----ISQYHLKEIGEIGIGSACVSVSLALENPKISIHASDVSLKALEV 150 Query: 137 AKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYI------ESVIVDCLGLEVRDF 190 A N + ER ++ + + + +++SNPPYI E ++ Sbjct: 151 ASKNIERFNLKERVFLKKTHLWDRMPTI-QMLISNPPYIARGYPLEKSVLK--------- 200 Query: 191 DPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAF 250 +P +L GG+ G + I + K + E+GY+Q + E + + Sbjct: 201 EPHEALFGGVKGDEILKEIIFLAAEL--KVPFLACEMGYDQLKSLKECLEFCG-YDAEFY 257 Query: 251 KDYGGNDR 258 KD+ G DR Sbjct: 258 KDWSGFDR 265 >gi|329767189|ref|ZP_08258716.1| hypothetical protein HMPREF0428_00413 [Gemella haemolysans M341] gi|328836856|gb|EGF86503.1| hypothetical protein HMPREF0428_00413 [Gemella haemolysans M341] Length = 198 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 27/79 (34%), Positives = 50/79 (63%) Query: 95 KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154 +++ ++ D+G G G + + L K+ P FK VD++ + LE++K N N ++ + L+ Sbjct: 55 EKENAKVADIGCGYGVISIFLAKKYPTFKFTMVDVNNRVLELSKKNIELNKINNEVEVLE 114 Query: 155 SDWFSSVEGLFDVIVSNPP 173 S F +VEG FD++++NPP Sbjct: 115 SSSFDNVEGNFDIVLTNPP 133 >gi|325990138|ref|YP_004249837.1| modification methylase, HemK family [Mycoplasma suis KI3806] gi|323575223|emb|CBZ40888.1| Modification methylase, HemK family [Mycoplasma suis] Length = 280 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 63/232 (27%), Positives = 111/232 (47%), Gaps = 35/232 (15%) Query: 51 IHRILGWRDFYNVR-LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRIL------- 102 + R+ G R F+N + L F PR E+ELLV RI K D VR L Sbjct: 65 LTRLTG-RVFFNKKKWFLFQGVFSPRIESELLV---------RILK-DWVRELNLYSFSY 113 Query: 103 -DLGTGTGAVCLALLKESPFF--KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW-- 157 DL +G+G + L++L+E + +GV +D S +A + N+ + + + +DW Sbjct: 114 IDLCSGSGVIFLSVLEELNNYIKRGVAIDSSFRACKNISKNSELLKDNSKIEIYLTDWVK 173 Query: 158 FSSVEGLFDVIVSNPPYI-ESVIVD----CLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212 + + +DVI NPPY+ E +++ CLG DP+ +L G I+G SHY+ + + Sbjct: 174 YLTKNSEWDVITINPPYLSEEELIESREFCLG------DPKWALQGDINGWSHYQKMLEF 227 Query: 213 VSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 + + +++++ I +++ LF + ++DY R + R Sbjct: 228 AKTNSYWKLIIFECSEFHEQLWDKEIKKNKSLFTIRKYRDYLDKFRAIALIR 279 >gi|254779627|ref|YP_003057733.1| Modification methylase HemK [Helicobacter pylori B38] gi|254001539|emb|CAX29557.1| Modification methylase HemK [Helicobacter pylori B38] Length = 274 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 66/232 (28%), Positives = 102/232 (43%), Gaps = 21/232 (9%) Query: 31 DDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSL 90 ++ RFF + + L I +L DFY ++ PRPETE+LV AL Sbjct: 51 EEEARFF--ELVEKRLNDCPIEYLLESCDFYGRSFFVNEHVLIPRPETEILVKKALDI-- 106 Query: 91 PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150 I + + I ++G G+ V ++L E+P DIS +ALE+A N + ER Sbjct: 107 --ISQYHLKEIGEIGIGSACVSVSLALENPNLSIYASDISPRALEVALKNIERFNLKERV 164 Query: 151 DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDF-DPRISLDGGIDG---LSHY 206 Q+ + + + +++VSNPPY I LE +P +L GG+ G L Sbjct: 165 FLKQTRLWDRMPTI-EMLVSNPPY----IAKGYPLEKSVLKEPHEALFGGVKGDEILKEI 219 Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258 +A G+ K E+GY+Q + E + +KD G DR Sbjct: 220 VFLAAGL-----KIPFLVCEMGYDQLKSLKECLEFCG-YDAEFYKDLSGFDR 265 >gi|315586963|gb|ADU41344.1| protoporphyrinogen oxidase [Helicobacter pylori 35A] Length = 276 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 64/248 (25%), Positives = 101/248 (40%), Gaps = 39/248 (15%) Query: 33 RQRFFLTNAIVRSLKHESIHRILGWR----------------DFYNVRLTLSSDTFEPRP 76 ++R FL L HE R W DFY ++ PRP Sbjct: 35 KERVFLHTHAYLELNHEEEVRFFEWVERRLNDCPIEYLLESCDFYGHSFFVNEHVLIPRP 94 Query: 77 ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136 ETE+LV AL I + + I ++G G+ V ++L E+P DIS KALE+ Sbjct: 95 ETEILVKKALDI----ISQYHLKEIGEIGIGSACVSVSLALENPKISIHASDISPKALEV 150 Query: 137 AKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYI------ESVIVDCLGLEVRDF 190 A N + ER ++ + + + +++SNPPYI E ++ Sbjct: 151 ASKNIERFNLKERVFLKKTHLWDRMPTI-QMLISNPPYIARGYPLEKSVLK--------- 200 Query: 191 DPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAF 250 +P +L GG+ G + I + K + E+GY+Q + E + + Sbjct: 201 EPHEALFGGVKGDEILKEIIFLAAE--LKIPFLACEMGYDQLKSLKECLEFCG-YDAEFY 257 Query: 251 KDYGGNDR 258 KD+ G DR Sbjct: 258 KDWSGFDR 265 >gi|269957405|ref|YP_003327194.1| modification methylase, HemK family [Xylanimonas cellulosilytica DSM 15894] gi|269306086|gb|ACZ31636.1| modification methylase, HemK family [Xylanimonas cellulosilytica DSM 15894] Length = 298 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 60/218 (27%), Positives = 91/218 (41%), Gaps = 12/218 (5%) Query: 19 SHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPET 78 SH+ +DP L + R + E + +LGW F R ++ F PR + Sbjct: 57 SHEPSLDPG---------LLEALVARRVGGEPLEHVLGWVAFAGRRWAVAPGVFVPRQRS 107 Query: 79 ELLVDSALAFSLPRIEKRDVVRIL-DLGTGTGAVCLALLKESPFFKGV--GVDISCKALE 135 ELLV ALA P +R ++ DL G GA+ A+ P V VD+ A Sbjct: 108 ELLVAQALAAVRPTTAERTTATVVVDLCCGNGALGGAVAAALPGSGVVLHAVDLDRAATA 167 Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195 A N G L + ++ G D+++ + PY+ + V + E R+ +P + Sbjct: 168 CAAQNLAPFGGVVHTGDLYAPLPLTLRGRVDLLLCHAPYVPTAAVALMPHEAREHEPLTA 227 Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233 LDGG DGL R L G E+G + +V Sbjct: 228 LDGGPDGLEILRRAIWEAPAWLAPGGSLLFEVGDDTQV 265 >gi|325066843|ref|ZP_08125516.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Actinomyces oris K20] Length = 285 Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 51/170 (30%), Positives = 80/170 (47%), Gaps = 10/170 (5%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD-VVR 100 ++R E + I+G L F RPETE++ +A+ + ++ VV Sbjct: 59 VLRRECREPLQHIIGRMWLRGAELISRPGVFIVRPETEVVAGAAIEAAREVMDGGGGVVL 118 Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW--- 157 DL TG+GA+ + KE P + V V+IS A +A+ N V R + + +D Sbjct: 119 TADLCTGSGAIAACVAKEVPGARVVAVEISETAASLAREN-CERLVPGRVEVIHADATDP 177 Query: 158 --FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL-DGGIDGLS 204 + G DV+VSNPPY+ + V+ E +P ++L GG DGL Sbjct: 178 LVLHDLNGQVDVVVSNPPYVPAGAVE--DTETEQHEPTVALYGGGPDGLE 225 >gi|260944776|ref|XP_002616686.1| hypothetical protein CLUG_03927 [Clavispora lusitaniae ATCC 42720] gi|238850335|gb|EEQ39799.1| hypothetical protein CLUG_03927 [Clavispora lusitaniae ATCC 42720] Length = 289 Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 72/267 (26%), Positives = 113/267 (42%), Gaps = 35/267 (13%) Query: 11 LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70 L R TG S + + + ++ R TNA+ R E + ILG + F ++ + Sbjct: 22 LLRATG-SLERAHSELKWIENELPRHKWTNAVNRRACLEPLQYILGSQPFGSLDILCGRG 80 Query: 71 TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130 PR ETE + + I++ + RILD TGTG + L L E P K D S Sbjct: 81 VLIPRWETEEWATAVASI----IKEFESPRILDACTGTGCIPLLLKHELPHAKVQAFDFS 136 Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSV-------EGLFDVIVSNPPYI------ES 177 AL +A N E+FD S + V + FD++ +NPPYI Sbjct: 137 EDALRLAGLN------KEKFDIDVSFHYGDVFDSNMKFDHPFDLVTANPPYIPINDYERP 190 Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237 +++ VR ++PR +L G L Y + D + R G+ E+GY ++ Sbjct: 191 MLLSGPEKSVRLYEPRSALVG---HLEFYHALVDNIVRASQCSGII-FELGYEEQAQAT- 245 Query: 238 IFESRKL---FLVNAFKDYGGNDRVLL 261 + KL +L + D G R ++ Sbjct: 246 ---AEKLGTAWLCGRYNDSAGRLRCVV 269 >gi|224372757|ref|YP_002607129.1| modification methylase, HemK family [Nautilia profundicola AmH] gi|223588590|gb|ACM92326.1| modification methylase, HemK family [Nautilia profundicola AmH] Length = 257 Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 56/203 (27%), Positives = 98/203 (48%), Gaps = 16/203 (7%) Query: 60 FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIE-KRDVVRILDLGTGTGAVCLALLKE 118 FY R + PR +TE++++ A+ + + K + +I+D TG+G + + + K Sbjct: 61 FYGDRFYIKEGVLIPRDDTEVVLERAIKLINEKCKTKSEKCKIVDCCTGSGVIAIEIAKH 120 Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVS---ERFDTLQSDWFSSVEGLFDVIVSNPPYI 175 + K + DIS A+E+A+ N + V ++ D L+ + E D++VSNPPY+ Sbjct: 121 TNA-KVIATDISDTAIEVAEKNIALHNVDVEVKKCDLLKCE---GEEIKADILVSNPPYV 176 Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235 E+ + ++P ++ GG DGL + + K + +EIGYNQK ++ Sbjct: 177 ENS-----WQKPNVYEPDLAFYGGDDGLDIVKELILKAKDLKYKAAV--IEIGYNQK-NL 228 Query: 236 VRIFESRKLFLVNAFKDYGGNDR 258 + F K F D GN R Sbjct: 229 LSEFLKDKAESFEFFNDLAGNVR 251 >gi|68536430|ref|YP_251135.1| methylase of peptide chain release factors [Corynebacterium jeikeium K411] gi|68264029|emb|CAI37517.1| methylase of peptide chain release factors [Corynebacterium jeikeium K411] Length = 308 Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 69/259 (26%), Positives = 106/259 (40%), Gaps = 26/259 (10%) Query: 18 SSHQVIVDPDSVL---DDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEP 74 + +V VDP ++ DD + + R + E + I+G F + L + F P Sbjct: 50 PTPRVAVDPGALFMRADDPAPSAYADWVARRVAREPLQHIVGSAPFCGLDLFVEPGCFVP 109 Query: 75 RPETELLVDSALAFSLPRIEKRDVVRILDL--GTGTGAVCLALLKESPFFKGVGVDISCK 132 RPETELL D A F + R ++DL G GT + ++ L ++P G +IS Sbjct: 110 RPETELLADWAAHF----LTGRPTPHVVDLCCGPGTLGLGVSFLYDAPISL-TGFEISPA 164 Query: 133 ALEIAKSNA-VTNGVSERF--------DTLQSDWFSSV-EGLF---DVIVSNPPYIESVI 179 AL +A+ NA + V+ F D L+ V G F DV+V NPPY+ Sbjct: 165 ALRLAEKNARLVPQVNATFVQADLAVDDPLEPPATRDVSPGAFAPADVVVCNPPYVPEST 224 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 + EV DP ++ G DGL + G +E + V + Sbjct: 225 E--ISPEVA-ADPHAAVFSGDDGLDLMPRVLQWAEALGRAGGGVGIEHDDSNGAQVAAMM 281 Query: 240 ESRKLFLVNAFKDYGGNDR 258 + R + +D G R Sbjct: 282 QQRGWRDITQHRDLAGRPR 300 >gi|14591489|ref|NP_143569.1| hypothetical protein PH1731 [Pyrococcus horikoshii OT3] gi|3258162|dbj|BAA30845.1| 198aa long hypothetical protein [Pyrococcus horikoshii OT3] Length = 198 Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 58/184 (31%), Positives = 93/184 (50%), Gaps = 18/184 (9%) Query: 60 FYN-VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118 +YN +++ + + +EP +T LL +S L ++ D+V LD+GTGTG + L + Sbjct: 4 YYNGLKIESNEEVYEPAEDTFLLAESLL----DEVKSDDIV--LDVGTGTGILALLAARR 57 Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESV 178 + F VG+DI+ KA+ +A NA NG+ L SD F ++ G FD+IV NPPY+ Sbjct: 58 ARFV--VGLDINEKAINLAWKNAKINGIKNVVFIL-SDLFENIRGTFDLIVFNPPYLP-- 112 Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238 G E++D ++L GG G V +L+ G + +DV + Sbjct: 113 -----GEEIKD-KVDLALIGGKTGGEVISRFLGSVKDYLSSRGRILLIYSSLTGLDVEKA 166 Query: 239 FESR 242 F+ R Sbjct: 167 FKER 170 >gi|284931147|gb|ADC31085.1| HemK-like methylase [Mycoplasma gallisepticum str. F] Length = 284 Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 54/192 (28%), Positives = 88/192 (45%), Gaps = 20/192 (10%) Query: 74 PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133 PR +T +++ L R +D+V +LD+ TGTG + L + K+ P ++ G DIS A Sbjct: 94 PRIDTNAVIEKFLEVINLR---KDIVNVLDICTGTGLIALTIKKQFPKYQVFGSDISKSA 150 Query: 134 LEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDF 190 ++IA NAV N + RF D L+ F V D ++ NPPY++ + E+ ++ Sbjct: 151 VKIANFNAVNNLLDARFYVADYLEV--FEQVSEEIDALIINPPYLDEELKSNYIKEI-NY 207 Query: 191 DPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAF 250 +P +L G Y I ++ + K + +E I+E V Sbjct: 208 EPFNALFAKNGGTFFYEEIFRYLTTNKTKIKVLCMEFS-------EPIYEKT----VQLL 256 Query: 251 KDYGGNDRVLLF 262 K YG D+ F Sbjct: 257 KKYGLYDKTAFF 268 >gi|90422424|ref|YP_530794.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Rhodopseudomonas palustris BisB18] gi|90104438|gb|ABD86475.1| modification methylase, HemK family [Rhodopseudomonas palustris BisB18] Length = 367 Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 48/134 (35%), Positives = 67/134 (50%), Gaps = 6/134 (4%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVSERFDTLQS 155 V +LDL TG+G CLA+L F VD S ALE+A N + +R Q Sbjct: 201 VESVLDLCTGSG--CLAVLASQRFPNARIDAVDASPDALEVAAENIDIYELEDRVTLYQG 258 Query: 156 DWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214 D F + + +D+I+SNPPY+++ + L E R +P ++ GG DGL R I Sbjct: 259 DLFKPLGDTRYDLIISNPPYVDAQGMADLPEECRA-EPELAFFGGEDGLDIVRRILAEAK 317 Query: 215 RHLNKDGLCSVEIG 228 +HL G EIG Sbjct: 318 QHLTPTGGLLCEIG 331 >gi|42560703|ref|NP_975154.1| protoporphyrinogen oxidase [Mycoplasma mycoides subsp. mycoides SC str. PG1] gi|42492199|emb|CAE76796.1| protoporphyrinogen oxidase [Mycoplasma mycoides subsp. mycoides SC str. PG1] Length = 282 Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 61/242 (25%), Positives = 112/242 (46%), Gaps = 31/242 (12%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D + L + +I + D L +Q + + + ++ + IL + FY+ Sbjct: 23 DVYHILEHIINKDYQWIISNLDHKLTKKQIYKIDQILDLLKQNYPLAYILKSKYFYSNIF 82 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG--AVCLALLKESPFFK 123 ++ D PR E+EL++D F ++ + + I+DL TG+G + ALL + K Sbjct: 83 FVNKDVLIPRNESELIIDHVSEF----VKNNNDLLIVDLCTGSGCLGISCALLNDQN--K 136 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF-----------DVIVSNP 172 + DIS K+L++A N ++F+ + + S + G F ++I+ NP Sbjct: 137 VILTDISYKSLKVANKNI------KKFNLINT---SCLNGNFIDVLIKNNLKANLIICNP 187 Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL--NKDGLCSVEIGYN 230 PYI+ + + V DF+P I+L GL Y + + + + NK+ L +E G+ Sbjct: 188 PYID-INDQNIDKNVIDFEPSIALFAPNKGLYFYEILIKNIDKIVDTNKNFLIVLEFGWL 246 Query: 231 QK 232 QK Sbjct: 247 QK 248 >gi|288929018|ref|ZP_06422864.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Prevotella sp. oral taxon 317 str. F0108] gi|288330002|gb|EFC68587.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Prevotella sp. oral taxon 317 str. F0108] Length = 285 Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 44/127 (34%), Positives = 61/127 (48%), Gaps = 4/127 (3%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAF--SLPRIEKRDVVRILDLGTGT 108 + +LG DF ++ PRPETE L + +LP +LD+GTG+ Sbjct: 58 VQYVLGRADFAGRTFDVAQGVLIPRPETEELCVWIVQTCSNLPVCGTSPT--LLDVGTGS 115 Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVI 168 G + L + P ++ +DIS AL+IA NA G RF + L+DVI Sbjct: 116 GCIATTLALDLPTWRVSAIDISQTALDIAARNAQKLGAEVRFALQDALCMPPDADLWDVI 175 Query: 169 VSNPPYI 175 VSNPPYI Sbjct: 176 VSNPPYI 182 >gi|326779715|ref|ZP_08238980.1| putative protein-(glutamine-N5) methyltransferase [Streptomyces cf. griseus XylebKG-1] gi|326660048|gb|EGE44894.1| putative protein-(glutamine-N5) methyltransferase [Streptomyces cf. griseus XylebKG-1] Length = 270 Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 59/211 (27%), Positives = 94/211 (44%), Gaps = 15/211 (7%) Query: 38 LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97 L++ + R + +LGW DF+ R + F PR TE LV A A + Sbjct: 41 LSSLVERRAAGLPLEHVLGWADFHGRRFAVDPGVFVPRRRTEFLVARAAALAP------R 94 Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 ++DL G+GA+ AL S + D+ A+ A+ N + + + D Sbjct: 95 RSVVVDLCCGSGALGAALAAVSDAAELHACDVEPAAVRCARRN-----IGDLGHVYEGDL 149 Query: 158 FS----SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213 F+ ++ G DV+++N PY+ + V+ L E R +PR++LDGG DGL R +A Sbjct: 150 FAPLPATLRGRVDVLLANVPYVPTDDVELLPAEARVHEPRVALDGGDDGLDVMRRVAAEA 209 Query: 214 SRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 L G VE Q+ V + + L Sbjct: 210 PAWLAPGGSLLVEASERQRDTAVEVLRAAGL 240 >gi|257054787|ref|YP_003132619.1| methylase of polypeptide chain release factors [Saccharomonospora viridis DSM 43017] gi|256584659|gb|ACU95792.1| methylase of polypeptide chain release factors [Saccharomonospora viridis DSM 43017] Length = 227 Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 37/77 (48%), Positives = 50/77 (64%), Gaps = 6/77 (7%) Query: 100 RILDLGTGTG--AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 R+LD+GTG+G AV A ES + VDI+ KALE A+ NA N V++R + SD Sbjct: 64 RVLDMGTGSGVNAVLAAAEAESV----LAVDINPKALEAARDNARRNDVADRIEVRHSDV 119 Query: 158 FSSVEGLFDVIVSNPPY 174 FS V+G FD+IV +PP+ Sbjct: 120 FSDVDGRFDLIVFDPPF 136 >gi|182439064|ref|YP_001826783.1| putative methylase [Streptomyces griseus subsp. griseus NBRC 13350] gi|178467580|dbj|BAG22100.1| putative methylase [Streptomyces griseus subsp. griseus NBRC 13350] Length = 270 Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 59/211 (27%), Positives = 94/211 (44%), Gaps = 15/211 (7%) Query: 38 LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97 L++ + R + +LGW DF+ R + F PR TE LV A A + Sbjct: 41 LSSLVERRAAGLPLEHVLGWADFHGRRFAVDPGVFVPRRRTEFLVARAAALAP------R 94 Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 ++DL G+GA+ AL S + D+ A+ A+ N + + + D Sbjct: 95 RSVVVDLCCGSGALGAALAAVSDAAELHACDVEPAAVRCARRN-----IGDLGHVYEGDL 149 Query: 158 FS----SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213 F+ ++ G DV+++N PY+ + V+ L E R +PR++LDGG DGL R +A Sbjct: 150 FAPLPATLRGRVDVLLANVPYVPTDDVELLPAEARVHEPRVALDGGGDGLDVMRRVAAEA 209 Query: 214 SRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 L G VE Q+ V + + L Sbjct: 210 PAWLAPGGSLLVEASERQRDTAVEVLRAAGL 240 >gi|260577563|ref|ZP_05845502.1| methylase of peptide chain release factor [Corynebacterium jeikeium ATCC 43734] gi|258604287|gb|EEW17525.1| methylase of peptide chain release factor [Corynebacterium jeikeium ATCC 43734] Length = 308 Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 69/256 (26%), Positives = 105/256 (41%), Gaps = 26/256 (10%) Query: 21 QVIVDPDSVL---DDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPE 77 +V VDP ++ DD + + R + E + I+G F + L + F PRPE Sbjct: 53 RVAVDPGALFMRADDPAPSAYADWVARRVAREPLQHIVGSAPFCGLDLFVEPGCFVPRPE 112 Query: 78 TELLVDSALAFSLPRIEKRDVVRILDL--GTGTGAVCLALLKESPFFKGVGVDISCKALE 135 TELL D A F + R ++DL G GT + ++ L ++P G +IS AL Sbjct: 113 TELLADWAAHF----LTGRPTPHVVDLCCGPGTLGLGVSFLYDAPISL-TGFEISPAALR 167 Query: 136 IAKSNA-VTNGVSERF--------DTLQSDWFSSV-EGLF---DVIVSNPPYIESVIVDC 182 +A+ NA + V+ F D L+ V G F DV+V NPPY+ Sbjct: 168 LAEKNARLVPQVNATFVQADLAVDDPLEPPATRDVSPGAFAPADVVVCNPPYVPESTE-- 225 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 + EV DP ++ G DGL + G +E + V + + R Sbjct: 226 ISPEVA-ADPHAAVFSGDDGLDLMPRVLQWAEALGRAGGGVGIEHDDSNGAQVAAMMQQR 284 Query: 243 KLFLVNAFKDYGGNDR 258 + +D G R Sbjct: 285 GWRDITQHRDLAGRPR 300 >gi|327312629|ref|YP_004328066.1| HemK familymethyltransferase [Prevotella denticola F0289] gi|326945265|gb|AEA21150.1| methyltransferase, HemK family [Prevotella denticola F0289] Length = 275 Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 61/234 (26%), Positives = 106/234 (45%), Gaps = 26/234 (11%) Query: 38 LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELL---VDSALAFSLPRIE 94 L + R + E + +LG+ F ++S PRPETE+L ++ S ++ Sbjct: 42 LEKIMSRLERAEPVQYVLGYAMFCGRPFHVASGVLIPRPETEVLCRWIEEDYNRSYCALQ 101 Query: 95 KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154 +++LD+GTG+G + ++L + D+S AL IA+ N + R + Sbjct: 102 PPVPLQVLDVGTGSGCIAVSLALDLYNSALTAWDVSGDALLIAREN--IHRWDARVELKM 159 Query: 155 SDWF----SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL-DGGIDGLSHYRTI 209 D +++E +DVIVSNPPYI + + V +++P +L D L YR + Sbjct: 160 EDALHPSPAAMEQQWDVIVSNPPYICNRERAAMAANVLEYEPETALFVPDDDPLQFYRAV 219 Query: 210 ADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL--VNAFKDYGGNDRVLL 261 A+ + L+ +G V FE+ L++ V D G +V+L Sbjct: 220 AEYGVQTLSDEG--------------VLYFETNPLYINKVKEMLDESGYKQVML 259 >gi|188994132|ref|YP_001928384.1| protoporphyrinogen oxidase [Porphyromonas gingivalis ATCC 33277] gi|188593812|dbj|BAG32787.1| protoporphyrinogen oxidase [Porphyromonas gingivalis ATCC 33277] Length = 293 Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 62/209 (29%), Positives = 92/209 (44%), Gaps = 14/209 (6%) Query: 10 FLCRVTGLS-SHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLS 68 L TGLS S ++ D D++L L+ + R + +G F+ ++ Sbjct: 31 LLTEATGLSRSALLLADKDTLLSTEASQALSRYLDRMKTGMPLQYAVGHAPFFGYEFAVN 90 Query: 69 SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128 PRPETE LV+ L P + +LD+GTG+G + + L +E K +D Sbjct: 91 PSVLIPRPETEELVELILRKERPAAAP---LCLLDVGTGSGCLAITLAREL-RAKVWAMD 146 Query: 129 ISCKALEIAKSNAVTNGVSERF-----DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183 IS AL A++N G +R D L D V D+IVSNPPYI + Sbjct: 147 ISPDALATARTNV---GEDDRIFFFEGDILSPDNRWDVLPPVDIIVSNPPYIMPAESADM 203 Query: 184 GLEVRDFDPRISLDGG-IDGLSHYRTIAD 211 V +P ++L D L Y+ IA+ Sbjct: 204 AYHVLGHEPALALFAPEEDPLLFYKAIAN 232 >gi|150399814|ref|YP_001323581.1| putative methylase [Methanococcus vannielii SB] gi|150012517|gb|ABR54969.1| putative methylase [Methanococcus vannielii SB] Length = 202 Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 49/165 (29%), Positives = 82/165 (49%), Gaps = 15/165 (9%) Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 +V++ + P ++ELL+++ L ++ + V LD+GTG+G + LK Sbjct: 9 DVKIKTHPKVYVPAEDSELLIEN-----LVDVKNKTV---LDVGTGSGIQAINALKNGAL 60 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180 G+DI+ A+E AK+NA N ++ SD F ++ G FDVI+ N PY+ + Sbjct: 61 MV-YGIDINPYAIECAKNNAEINKCDLKKISFKTSDLFKNISGKFDVILFNAPYLPTSND 119 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225 + L + + DGG DG GVS HLN++G+ + Sbjct: 120 EKLEKYL-----NYAFDGGKDGREVIDNFLLGVSDHLNENGVVQI 159 >gi|317177824|dbj|BAJ55613.1| protoporphyrinogen oxidase [Helicobacter pylori F16] Length = 276 Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 63/249 (25%), Positives = 101/249 (40%), Gaps = 39/249 (15%) Query: 32 DRQRFFLTNAIVRSLKHESIHRILGWR----------------DFYNVRLTLSSDTFEPR 75 ++R FL L HE R W DFY ++ PR Sbjct: 34 QKERVFLHTHAYLELNHEEEVRFFEWVEKRLNDCPIEYLLESCDFYGRSFFVNEHVLIPR 93 Query: 76 PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135 PETE+LV AL I + + I ++G G+ V ++L E+P +IS KALE Sbjct: 94 PETEILVKKALDI----ISQYHLKEIGEIGIGSACVSVSLALENPKISIHASEISLKALE 149 Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYI------ESVIVDCLGLEVRD 189 +A N + ER ++ + + + +++SNPPYI E ++ Sbjct: 150 VASKNIERFNLKERIFLKKTHLWDRMPTV-QMLISNPPYIARGYPLEKSVLK-------- 200 Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249 +P +L GG+ G + I + K + E+GY+Q + E + Sbjct: 201 -EPHEALFGGVKGDEILKEIIFLAAEL--KIPFLACEMGYDQLKSLKECLEFCG-YDAEF 256 Query: 250 FKDYGGNDR 258 +KD+ G DR Sbjct: 257 YKDWSGFDR 265 >gi|170768477|ref|ZP_02902930.1| ribosomal RNA small subunit methyltransferase C [Escherichia albertii TW07627] gi|170122581|gb|EDS91512.1| ribosomal RNA small subunit methyltransferase C [Escherichia albertii TW07627] Length = 343 Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 38/122 (31%), Positives = 62/122 (50%), Gaps = 23/122 (18%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LD+G GTG + +A + SP + D+S A+E +++ V NG+ + S+ FS Sbjct: 199 KVLDIGCGTGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLVANGIEG--EVFASNVFS 256 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 V+G FD+I+SNPP+ + + + SLD +T+ G RHLN Sbjct: 257 EVKGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 295 Query: 220 DG 221 G Sbjct: 296 GG 297 >gi|331703154|ref|YP_004399841.1| Modification methylase [Mycoplasma mycoides subsp. capri LC str. 95010] gi|328801709|emb|CBW53862.1| Modification methylase [Mycoplasma mycoides subsp. capri LC str. 95010] Length = 282 Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 61/242 (25%), Positives = 110/242 (45%), Gaps = 31/242 (12%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D + L + +I + D L +Q + + ++ + IL + FY+ Sbjct: 23 DVYHILEHIINKDYQWIISNLDHKLTKKQIYKIDQIFDLLKQNYPLAYILKSKYFYSNNF 82 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG--AVCLALLKESPFFK 123 ++ D PR E+EL++D F ++ + + I+DL TG+G + ALL + K Sbjct: 83 FINKDVLIPRNESELIIDHVSEF----VKNNNDLLIVDLCTGSGCLGISCALLNDQN--K 136 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF-----------DVIVSNP 172 + DIS KAL++A N ++F+ + S + G F ++I+ NP Sbjct: 137 VILTDISYKALKVANKNI------KKFNLTNT---SCLNGNFIDVLIKNNLKANLIICNP 187 Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL--NKDGLCSVEIGYN 230 PYI+ + + V +F+P I+L GL Y + + + + NK+ L +E G+ Sbjct: 188 PYID-INDQNIDKNVIEFEPSIALFAPNKGLYFYEILIKNIDKIVDTNKNFLIVLEFGWL 246 Query: 231 QK 232 QK Sbjct: 247 QK 248 >gi|296417256|ref|XP_002838274.1| hypothetical protein [Tuber melanosporum Mel28] gi|295634202|emb|CAZ82465.1| unnamed protein product [Tuber melanosporum] Length = 324 Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 64/239 (26%), Positives = 102/239 (42%), Gaps = 29/239 (12%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110 + +LG + F + + PRPETE L + VRI+DL TGTG Sbjct: 69 LQYLLGTQPFGALEMICERGVLIPRPETEQSASHLGGHMLKHLHPHSQVRIVDLCTGTG- 127 Query: 111 VCLALLKESPFFKG------VGVDISCKALEIAKSNAVTN----------------GVSE 148 C+ LL + +GVDIS KAL +K N N G Sbjct: 128 -CIPLLLHNQLSAAGMSSRILGVDISVKALRSSKRNLEHNEKVLSANAREDIEFFGGDVL 186 Query: 149 RFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD-CLGLEVRDFDPRISL-DGGIDGLSHY 206 D+L ++G+ D+++SNPPYI + G VR+++P+++L G +G Y Sbjct: 187 AVDSLVETIGGKLQGV-DIVISNPPYISKESFNRSTGRSVRNYEPKLALVPKGGNGDIFY 245 Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL-VNAFKDYGGNDRVLLFCR 264 I V+ L + + G+ Q V + + ++ V +KD+ G R ++ R Sbjct: 246 PAIGR-VAESLGSQAVIAEVEGWEQANRVKQEWAGSGVWEGVGIWKDFAGIGRTVVGWR 303 >gi|18978045|ref|NP_579402.1| protoporphyrinogen oxidase [Pyrococcus furiosus DSM 3638] gi|18893832|gb|AAL81797.1| protoporphyrinogen oxidase [Pyrococcus furiosus DSM 3638] Length = 201 Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 42/117 (35%), Positives = 69/117 (58%), Gaps = 9/117 (7%) Query: 59 DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118 ++ +++ +S + +EP ++ LL + L E RD +LD+GTG+G + L K+ Sbjct: 4 EYMGLKIEISEEVYEPAEDSFLLAEVLLK------EVRDEDIVLDMGTGSGILALLAAKK 57 Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYI 175 + F VGVDI+ +A++IA NAV N V ++SD F ++ G F +IV NPPY+ Sbjct: 58 AKFV--VGVDINERAVDIAWKNAVNNDVKNVI-FVKSDLFENIRGRFSLIVFNPPYL 111 >gi|237801726|ref|ZP_04590187.1| hypothetical protein POR16_23066 [Pseudomonas syringae pv. oryzae str. 1_6] gi|331024585|gb|EGI04641.1| hypothetical protein POR16_23066 [Pseudomonas syringae pv. oryzae str. 1_6] Length = 314 Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 34/79 (43%), Positives = 48/79 (60%), Gaps = 1/79 (1%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 + R +D+G GTGA L + P + VDI+ KAL A++NA G+ E + QSD Sbjct: 135 ISRAVDIGCGTGAGGLLIAVARPDAQVFAVDINPKALHFAQTNAALAGL-ENVECCQSDI 193 Query: 158 FSSVEGLFDVIVSNPPYIE 176 S V G FD+IV+NPPY++ Sbjct: 194 LSGVTGTFDLIVANPPYMK 212 >gi|170782046|ref|YP_001710378.1| HemK family methyltransferase [Clavibacter michiganensis subsp. sepedonicus] gi|169156614|emb|CAQ01766.1| putative HemK-family methyltransferase [Clavibacter michiganensis subsp. sepedonicus] Length = 274 Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 51/197 (25%), Positives = 83/197 (42%) Query: 49 ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108 E + +LGW F R+ + F PR TE L +A+ + + ++D+ G+ Sbjct: 54 EPLETVLGWVAFAGRRIIVRPGVFVPRRRTEQLAGAAVEAAAQATRRTGHAVVVDMCCGS 113 Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVI 168 GA+ + E P D+ A+ A N V G + L + + G DV+ Sbjct: 114 GAIGAVVADEVPGAVLHAADVDPAAVACAAENLVPRGAAVHRGDLMAALPPELRGRIDVL 173 Query: 169 VSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228 V+N PY+ V + + E R +P ++ DGG DGL R +A L G VE+ Sbjct: 174 VANVPYVPRVGLALMPPEARLHEPEVTRDGGEDGLDVLRRVAAEGREWLAPTGTVLVEVA 233 Query: 229 YNQKVDVVRIFESRKLF 245 Q ++ + L Sbjct: 234 DAQVTGALQAMRAAGLV 250 >gi|329945389|ref|ZP_08293152.1| protein-(glutamine-N5) methyltransferase [Actinomyces sp. oral taxon 170 str. F0386] gi|328529011|gb|EGF55942.1| protein-(glutamine-N5) methyltransferase [Actinomyces sp. oral taxon 170 str. F0386] Length = 298 Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 51/169 (30%), Positives = 79/169 (46%), Gaps = 10/169 (5%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD-VVR 100 ++R E + I+G L F RPETE++ +A+ + + VV Sbjct: 72 VLRRECREPLQHIIGRMWLRGAELISRPGVFIVRPETEVVAGAAIEAAREVMAGGGGVVL 131 Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW--- 157 DL TG+GA+ + KE P + V V+IS A +A+ N V R + + +D Sbjct: 132 TADLCTGSGAIAACVAKEVPGARVVAVEISETAAALAREN-CERLVPGRVEVIHADATDP 190 Query: 158 --FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL-DGGIDGL 203 + G DV+VSNPPY+ + V+ E +P ++L GG DGL Sbjct: 191 LVLHDLNGQVDVVVSNPPYVPAGAVE--DTETAQHEPTVALYGGGPDGL 237 >gi|320592224|gb|EFX04663.1| mitochondrial n-glutamine methyltransferase mtq1 [Grosmannia clavigera kw1407] Length = 341 Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 59/216 (27%), Positives = 90/216 (41%), Gaps = 24/216 (11%) Query: 1 MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60 + A RD S L + + H + D +R + R + E + +LG + F Sbjct: 23 LPACRDLPSSLAELRWIRQHVAVSRADG--GQPRRAIVQRLCRRRGRGEPLQYVLGTQPF 80 Query: 61 YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL---LK 117 + L PRPE E LA L R E V ILD+ TGTG + L L L+ Sbjct: 81 GPLDLLCRRGVLIPRPEPEAY-SLFLADWLMRPEIGPVSTILDVCTGTGCIALLLYERLR 139 Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVS-------------ERFDTLQSDWF----SS 160 + + VG+D+S A+ +A++N G R D DW ++ Sbjct: 140 QQQHLRVVGIDVSPAAVALARANRRRLGFPSDRDGTDSSSVSFHRADVFADDWLHLASNA 199 Query: 161 VEGLFDVIVSNPPYI-ESVIVDCLGLEVRDFDPRIS 195 +G DV+V NPPY+ VR F+P+++ Sbjct: 200 ADGRIDVLVCNPPYVSRDGFAHETARSVRLFEPKLA 235 >gi|222081320|ref|YP_002540683.1| protoporphyrinogen oxidase (methyltransferase) protein [Agrobacterium radiobacter K84] gi|221725999|gb|ACM29088.1| protoporphyrinogen oxidase (methyltransferase) protein [Agrobacterium radiobacter K84] Length = 247 Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 47/179 (26%), Positives = 83/179 (46%), Gaps = 10/179 (5%) Query: 60 FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRIL-DLGTGTGAVCLALLKE 118 F N+ L + PR ETELL + R+ + V I+ D+ G G + +A+ Sbjct: 39 FMNLDFELGPNVLVPRKETELLG----TVCIDRLSQGTVTPIVVDMCCGCGNLGIAIAMN 94 Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-----EGLFDVIVSNPP 173 + D++ + +++A N + G+ +R +Q D F ++ EG D+IV NPP Sbjct: 95 IADAQVWSCDLTPETVDVAWRNVIRFGLQDRMSVVQGDMFENIRSIGLEGRVDLIVCNPP 154 Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232 YI + ++ + + +PR + DGG G+S + + L G + E G Q+ Sbjct: 155 YISTGRLEADRAHLLENEPREAFDGGPYGISIQQRLIREAFEFLKPGGWLAFEFGEGQE 213 >gi|47094310|ref|ZP_00232013.1| HemK protein [Listeria monocytogenes str. 4b H7858] gi|47017320|gb|EAL08150.1| HemK protein [Listeria monocytogenes str. 4b H7858] Length = 146 Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 49/135 (36%), Positives = 63/135 (46%), Gaps = 6/135 (4%) Query: 128 DISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184 DIS AL +AK NA+ RF D L++ F E FD+IV+NPPYI + Sbjct: 5 DISAPALAVAKKNALLLNADVRFVETDLLEA--FKQNEERFDMIVANPPYISEAEKAEMS 62 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE-SRK 243 V +P ++L DGL+ Y D + LN VEIGY Q V ++FE S Sbjct: 63 DYVLKNEPSLALFAENDGLAIYERFVDNLQYVLNSSFWVGVEIGYTQGERVKQLFEKSYP 122 Query: 244 LFLVNAFKDYGGNDR 258 V KD DR Sbjct: 123 HSTVIIHKDINSKDR 137 >gi|301321173|gb|ADK69816.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Mycoplasma mycoides subsp. mycoides SC str. Gladysdale] Length = 282 Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 61/242 (25%), Positives = 111/242 (45%), Gaps = 31/242 (12%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D + L + +I + D L +Q + + + ++ + IL + FY+ Sbjct: 23 DVYHILEHIINKDYQWIISNLDHKLTKKQIYKIDQILDLLKQNYPLAYILKSKYFYSNIF 82 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG--AVCLALLKESPFFK 123 ++ D PR E+EL++D F ++ + + I+DL TG+G + ALL + K Sbjct: 83 FVNKDVLIPRNESELIIDHVSEF----VKNNNDLLIVDLCTGSGCLGISCALLNDQN--K 136 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF-----------DVIVSNP 172 + DIS K+L++A N ++F+ + S + G F ++I+ NP Sbjct: 137 VILTDISYKSLKVANKNI------KKFNLTNT---SCLNGNFIDVLIKNNLKANLIICNP 187 Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL--NKDGLCSVEIGYN 230 PYI+ + + V DF+P I+L GL Y + + + + NK+ L +E G+ Sbjct: 188 PYID-INDQNIDKNVIDFEPSIALFAPNKGLYFYEILIKNIDKIVDTNKNFLIVLEFGWL 246 Query: 231 QK 232 QK Sbjct: 247 QK 248 >gi|281421475|ref|ZP_06252474.1| protein-(glutamine-N5) methyltransferase [Prevotella copri DSM 18205] gi|281404547|gb|EFB35227.1| protein-(glutamine-N5) methyltransferase [Prevotella copri DSM 18205] Length = 306 Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 69/256 (26%), Positives = 108/256 (42%), Gaps = 12/256 (4%) Query: 16 GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75 G++ +I + L + L I R K E + +LG DF + PR Sbjct: 47 GMTLTDIICGKVNELSADEERKLEEIIRRLQKGEPVQYVLGEADFAGRTFHVEPGVLIPR 106 Query: 76 PETELLV-----DSALAFSLPRIE-KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129 PET L D+ + E + + +RILD+ TG+G + + L + + G DI Sbjct: 107 PETAELCEWIEKDATENKGITEGENEENAIRILDICTGSGCIAITLGLDIGGSEVTGWDI 166 Query: 130 SCKALEIAKSNAV----TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185 S AL+IA+ N N E D L+ S G +++IVSNPPYI + Sbjct: 167 SEDALKIAQGNVALLDAGNVKIEYQDALKLAETSDA-GRWNIIVSNPPYICEKEKADMEK 225 Query: 186 EVRDFDPRISL-DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 V + +P I+L + L YR IA+ S L G EI + + + E Sbjct: 226 NVLEHEPGIALFVPDEEPLKFYRAIAEYASSALKSGGALYFEINPIYEKETREMLEGLGF 285 Query: 245 FLVNAFKDYGGNDRVL 260 ++ +D G R++ Sbjct: 286 KAIDTKEDAFGKQRMM 301 >gi|15679329|ref|NP_276446.1| methyltransferase related protein [Methanothermobacter thermautotrophicus str. Delta H] gi|2622435|gb|AAB85807.1| methyltransferase related protein [Methanothermobacter thermautotrophicus str. Delta H] Length = 196 Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 51/163 (31%), Positives = 80/163 (49%), Gaps = 19/163 (11%) Query: 60 FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119 + +++ + +EP +T LL D+ ++ R+ R+L++GTGTG V ++ S Sbjct: 6 YGEIKIKTCENVYEPAEDTFLLADN--------LDVREGDRVLEIGTGTGLVA---IRAS 54 Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESV 178 D++ A++ + NA+ NGV R LQ D F VEG FDVI+ N PY+ + Sbjct: 55 EKGDVTATDVNPAAVKCTQENAIINGVELR--VLQGDLFDPVEGEKFDVILFNTPYLPAT 112 Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221 D G +V D ++ +GG DG D V HL G Sbjct: 113 GDDATG-DVLD----LAWNGGPDGRMVIDRFLDEVPAHLKPGG 150 >gi|308062349|gb|ADO04237.1| protoporphyrinogen oxidase (hemK) [Helicobacter pylori Cuz20] Length = 276 Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 64/237 (27%), Positives = 102/237 (43%), Gaps = 31/237 (13%) Query: 31 DDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSL 90 ++ RFF + + L I +L DFY ++ PRPETE+LV AL Sbjct: 51 EEEARFF--ELVEKRLNDCPIEYLLESCDFYGHSFFVNEHVLIPRPETEILVKKALDI-- 106 Query: 91 PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150 I + + I ++G G+ V ++L E+P DIS KALE+A N + ER Sbjct: 107 --ISQYHLKEIGEIGIGSACVSVSLALENPKISIHASDISLKALEVASKNIERFNLKERV 164 Query: 151 DTLQSDWFSSVEGLFDVIVSNPPYI------ESVIVDCLGLEVRDFDPRISLDGGIDG-- 202 ++ + + + ++VSNPPYI E ++ +P +L GG+ G Sbjct: 165 FLKKTHLWDRMPTI-QMLVSNPPYIARGYPLEKSVLK---------EPHEALFGGVKGDE 214 Query: 203 -LSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258 L +A + K + E+GY+Q + E + +KD G DR Sbjct: 215 ILKEIVFLAAAL-----KIPFLACEMGYDQLKSLKECLEFCG-YDAEFYKDLSGFDR 265 >gi|34540018|ref|NP_904497.1| HemK family modification methylase [Porphyromonas gingivalis W83] gi|34396329|gb|AAQ65396.1| modification methylase, HemK family [Porphyromonas gingivalis W83] Length = 293 Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 73/260 (28%), Positives = 108/260 (41%), Gaps = 16/260 (6%) Query: 10 FLCRVTGLS-SHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLS 68 L TGLS S ++ D D++L L+ + R + +G F+ ++ Sbjct: 31 LLTEATGLSRSALLLADKDTLLSTEASQALSRYLDRMKTGIPLQYAVGHAPFFGYEFAVN 90 Query: 69 SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128 PRPETE LV+ L P + +LD+GTG+G + + L +E K +D Sbjct: 91 PSVLIPRPETEELVELILRKERPAAAS---LCLLDVGTGSGCLAITLAREL-RAKVWAMD 146 Query: 129 ISCKALEIAKSNAVTNGVSERF-----DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183 IS AL A++N G +R D L D V D+IVSNPPYI + Sbjct: 147 ISPDALATARTNV---GEDDRIFFFEGDILSPDNRWDVLPPVDIIVSNPPYIMPAESADM 203 Query: 184 GLEVRDFDPRISLDGG-IDGLSHYRTIAD-GVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 V +P ++L D L Y+ IA+ S L G VE+ +F + Sbjct: 204 AYHVLGHEPALALFAPEEDPLLFYKAIANLSGSGKLRSGGRLYVELNPLLAEATCEVFSA 263 Query: 242 RKLFL-VNAFKDYGGNDRVL 260 + + V D G R L Sbjct: 264 KVGWCEVRLHTDLSGKSRFL 283 >gi|109947073|ref|YP_664301.1| protoporphyrinogen oxidase [Helicobacter acinonychis str. Sheeba] gi|109714294|emb|CAJ99302.1| protoporphyrinogen oxidase [Helicobacter acinonychis str. Sheeba] Length = 276 Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 55/180 (30%), Positives = 83/180 (46%), Gaps = 22/180 (12%) Query: 30 LDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFS 89 L+ R+ + + L I +L FY ++ PRPETE+LV AL Sbjct: 48 LNHREEMRFFELVKKRLNDYPIEYLLESCSFYGRSFFVNEHVLIPRPETEILVQKALDI- 106 Query: 90 LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 I + + + ++G G+G + ++L E+P DIS ALE+A N ER Sbjct: 107 ---ISQYHLKEVGEIGIGSGCISVSLALENPNLSIYASDISQNALEVASKNI------ER 157 Query: 150 FDTLQSDWFSSVEGLFD------VIVSNPPYI-ESVIVDCLGLEVRDFDPRISLDGGIDG 202 FD L+ F L+D ++VSNPPYI + +D L+ +P +L GGI G Sbjct: 158 FD-LKKCLFLKKTHLWDHMPTTPMLVSNPPYIAKGYPLDKSVLK----EPHEALFGGIKG 212 >gi|163940957|ref|YP_001645841.1| HemK family modification methylase [Bacillus weihenstephanensis KBAB4] gi|229134149|ref|ZP_04262968.1| Modification methylase, HemK [Bacillus cereus BDRD-ST196] gi|163863154|gb|ABY44213.1| modification methylase, HemK family [Bacillus weihenstephanensis KBAB4] gi|228649322|gb|EEL05338.1| Modification methylase, HemK [Bacillus cereus BDRD-ST196] Length = 258 Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 59/190 (31%), Positives = 90/190 (47%), Gaps = 8/190 (4%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110 + ++G+ +F +R+ + F PR TE LV S R I+DL G+GA Sbjct: 49 LEYVVGYTEFCGLRIEVDRGVFVPRKRTEFLVHQTEVLS------RSSDIIVDLCCGSGA 102 Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFSSVEGLFDVIV 169 V AL + VDI A++ A N VTN F+ L S++G +++V Sbjct: 103 VGAALAAALGRVELYSVDIDPIAVQCASRN-VTNFGGRAFEGDLYKALPDSLKGHVNILV 161 Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY 229 +N PY+ + I+ L E R ++P ++LDGG DGL+ R +A+ L DG +E Sbjct: 162 ANVPYVPTEIIKFLPREARLYEPNVTLDGGEDGLNILRRVAEEALLWLALDGHLLIETSE 221 Query: 230 NQKVDVVRIF 239 Q IF Sbjct: 222 VQAPQAFEIF 231 >gi|222036112|emb|CAP78857.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli LF82] gi|312948999|gb|ADR29826.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli O83:H1 str. NRG 857C] Length = 343 Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 38/122 (31%), Positives = 61/122 (50%), Gaps = 23/122 (18%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LD+G G G + +A + SP + D+S A+E +++ TNGV + S+ FS Sbjct: 199 KVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLATNGVEG--EVFASNVFS 256 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 V+G FD+I+SNPP+ + + + SLD +T+ G RHLN Sbjct: 257 EVKGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 295 Query: 220 DG 221 G Sbjct: 296 GG 297 >gi|317182326|dbj|BAJ60110.1| protoporphyrinogen oxidase [Helicobacter pylori F57] Length = 274 Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 65/251 (25%), Positives = 101/251 (40%), Gaps = 43/251 (17%) Query: 32 DRQRFFLTNAIVRSLKHES----------------IHRILGWRDFYNVRLTLSSDTFEPR 75 ++R FL L HE I +L DFY ++ PR Sbjct: 34 QKERVFLHTHAYLELNHEEEVHFFELVEKRLNDCPIEYLLESCDFYGRSFFVNEHVLIPR 93 Query: 76 PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135 PETE+LV AL I + + I ++G G+ V ++L E+P DIS KALE Sbjct: 94 PETEILVKKALDI----ISQYHLKEIGEIGIGSACVSVSLALENPKISIHASDISPKALE 149 Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDF----- 190 +A N + ER ++ + + + +++SNPPYI RD+ Sbjct: 150 VASKNIERFNLKERVFLKKTHLWDRMPTI-QMLISNPPYI-----------ARDYPLEKS 197 Query: 191 ---DPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLV 247 +P +L GG+ G + I + K + E+GY+Q + E + Sbjct: 198 VLKEPHEALFGGVKGDEILKEIIFLAAE--LKIPFLACEMGYDQLKSLKECLEFCG-YDA 254 Query: 248 NAFKDYGGNDR 258 +KD G DR Sbjct: 255 KFYKDLSGFDR 265 >gi|213028960|ref|ZP_03343407.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 85 Score = 62.4 bits (150), Expect = 7e-08, Method: Composition-based stats. Identities = 39/85 (45%), Positives = 50/85 (58%), Gaps = 5/85 (5%) Query: 44 RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103 R + E I + G R+F+++ L +S T PRP+TE LV+ ALA LP RILD Sbjct: 1 RRKQGEPIAYLTGLREFWSLPLFVSPATLIPRPDTECLVEQALA-RLP----VKTCRILD 55 Query: 104 LGTGTGAVCLALLKESPFFKGVGVD 128 LGTGTGA+ LAL E P + VD Sbjct: 56 LGTGTGAIALALACERPDCEVTAVD 80 >gi|317180127|dbj|BAJ57913.1| protoporphyrinogen oxidase [Helicobacter pylori F32] Length = 276 Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 64/249 (25%), Positives = 102/249 (40%), Gaps = 39/249 (15%) Query: 32 DRQRFFLTNAIVRSLKHES----------------IHRILGWRDFYNVRLTLSSDTFEPR 75 ++R FL L HE I +L DFY ++ PR Sbjct: 34 QKERVFLHTHAYLELNHEEEVCFFELVEKRLNDCPIEYLLKSCDFYGRSFFVNEHVLIPR 93 Query: 76 PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135 PETE+LV AL I + + I ++G G+ V ++L E+P DIS KALE Sbjct: 94 PETEILVKKALDI----ISQYHLKEIGEIGIGSACVSVSLALENPKISIHASDISPKALE 149 Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYI------ESVIVDCLGLEVRD 189 +A N + ER ++ + + + +++SNPPYI E ++ Sbjct: 150 VASKNIERFNLKERVFLKKTHLWDRMPTI-QMLISNPPYIARGYPLEKSVLK-------- 200 Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249 +P +L GG+ G + I + K + E+GY+Q + E + Sbjct: 201 -EPHEALFGGVKGDEILKEIIFLAAEL--KIPFLACEMGYDQLKSLKECLEFCG-YDAEF 256 Query: 250 FKDYGGNDR 258 +KD+ G DR Sbjct: 257 YKDWSGFDR 265 >gi|325268455|ref|ZP_08135085.1| protein-(glutamine-N5) methyltransferase [Prevotella multiformis DSM 16608] gi|324988983|gb|EGC20936.1| protein-(glutamine-N5) methyltransferase [Prevotella multiformis DSM 16608] Length = 287 Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 61/234 (26%), Positives = 105/234 (44%), Gaps = 26/234 (11%) Query: 38 LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELL---VDSALAFSLPRIE 94 L + R + E + +LG+ F ++S PRPETE+L ++ ++ Sbjct: 54 LEKIMSRLERAEPVQYVLGYAMFCGRPFHVASGVLIPRPETEVLCRWIEEDYNRPYCALQ 113 Query: 95 KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154 +++LD+GTG+G V ++L + D+S AL IA+ N + R + Sbjct: 114 PPVPLQVLDVGTGSGCVAVSLALDLYNSALTAWDVSGDALLIAREN--IHRWDARVELKM 171 Query: 155 SDWF----SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL-DGGIDGLSHYRTI 209 D +++E +D+IVSNPPYI + + V +++P +L D L YR I Sbjct: 172 EDALHPSPAAMERQWDIIVSNPPYICNRERAAMAANVLEYEPETALFVPDDDPLQFYRAI 231 Query: 210 ADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL--VNAFKDYGGNDRVLL 261 A+ + L+ +G V FE+ L++ V D G +V+L Sbjct: 232 AEYGVQTLSDEG--------------VLYFETNPLYINKVKEMLDESGYKQVML 271 >gi|282861510|ref|ZP_06270574.1| modification methylase, HemK family [Streptomyces sp. ACTE] gi|282563326|gb|EFB68864.1| modification methylase, HemK family [Streptomyces sp. ACTE] Length = 262 Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 58/196 (29%), Positives = 90/196 (45%), Gaps = 9/196 (4%) Query: 38 LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97 L + R + + +LGW +F +R+ + F PR TE LV A+A + Sbjct: 42 LAALVSRRVDGLPLEHVLGWAEFCGIRVAVGPGVFVPRRRTEFLVRQAVAAAP------A 95 Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSD 156 ++DL G+GA+ AL P + D+ A+ A+ N G+ E ++ L + Sbjct: 96 RPVVVDLCCGSGALGAALATALPAAELHAADVDPAAVRYARRN--LAGLGEVYEGDLFAP 153 Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216 S+ G DV+++N PY+ + V+ L E R +PR +LDGG DGL R +A Sbjct: 154 LPGSLRGRVDVLLANVPYVPTHDVELLPAEARVHEPRAALDGGGDGLDVMRRVAAAAPGW 213 Query: 217 LNKDGLCSVEIGYNQK 232 L G VE Q Sbjct: 214 LAPGGSLLVETSERQA 229 >gi|91214024|ref|YP_544010.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli UTI89] gi|117626683|ref|YP_860006.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli APEC O1] gi|122421235|sp|Q1R2D5|RSMC_ECOUT RecName: Full=Ribosomal RNA small subunit methyltransferase C; AltName: Full=16S rRNA m2G1207 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rsmC gi|226712946|sp|A1AJP2|RSMC_ECOK1 RecName: Full=Ribosomal RNA small subunit methyltransferase C; AltName: Full=16S rRNA m2G1207 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rsmC gi|91075598|gb|ABE10479.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli UTI89] gi|115515807|gb|ABJ03882.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli APEC O1] gi|294491814|gb|ADE90570.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli IHE3034] gi|307629539|gb|ADN73843.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli UM146] gi|323950544|gb|EGB46422.1| methyltransferase small domain-containing protein [Escherichia coli H252] Length = 343 Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 38/122 (31%), Positives = 61/122 (50%), Gaps = 23/122 (18%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LD+G G G + +A + SP + D+S A+E +++ TNGV + S+ FS Sbjct: 199 KVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLATNGVEG--EVFASNVFS 256 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 V+G FD+I+SNPP+ + + + SLD +T+ G RHLN Sbjct: 257 EVKGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 295 Query: 220 DG 221 G Sbjct: 296 GG 297 >gi|218692758|ref|YP_002400970.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli ED1a] gi|226712942|sp|B7MTB6|RSMC_ECO81 RecName: Full=Ribosomal RNA small subunit methyltransferase C; AltName: Full=16S rRNA m2G1207 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rsmC gi|218430322|emb|CAR11192.1| 16S RNA m2G1207 methylase [Escherichia coli ED1a] Length = 343 Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 38/122 (31%), Positives = 61/122 (50%), Gaps = 23/122 (18%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LD+G G G + +A + SP + D+S A+E +++ TNGV + S+ FS Sbjct: 199 KVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLATNGVEG--EVFASNVFS 256 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 V+G FD+I+SNPP+ + + + SLD +T+ G RHLN Sbjct: 257 EVKGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 295 Query: 220 DG 221 G Sbjct: 296 GG 297 >gi|317178623|dbj|BAJ56411.1| protoporphyrinogen oxidase [Helicobacter pylori F30] Length = 276 Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 64/243 (26%), Positives = 99/243 (40%), Gaps = 29/243 (11%) Query: 33 RQRFFLTNAIVRSLKHESIHRILGWR----------------DFYNVRLTLSSDTFEPRP 76 ++R FL L HE W DFY ++ PRP Sbjct: 35 KERVFLHTHTYLELNHEEEVHFFEWVEKRLNDYPIEYLLESCDFYGRSFFVNEHVLIPRP 94 Query: 77 ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136 ETE+LV AL I + + I ++G G+ V ++L E+P DIS KALE+ Sbjct: 95 ETEILVKKALDI----ISQYHLKEIGEIGIGSACVSVSLALENPKISIHASDISPKALEV 150 Query: 137 AKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDF-DPRIS 195 A N + ER ++ + + + +++SNPPY I LE +P + Sbjct: 151 ASKNIERFNLKERVFLKKTHLWDRMPTI-QMLISNPPY----IARGYPLEKSVLKEPHEA 205 Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGG 255 L GG+ G + I + K + E+GY+Q + E + +KD+ G Sbjct: 206 LFGGVKGDEILKEIIFLAAE--LKIPFLACEMGYDQLKSLKECLEFCG-YDAEFYKDWSG 262 Query: 256 NDR 258 DR Sbjct: 263 FDR 265 >gi|313886071|ref|ZP_07819809.1| methyltransferase, HemK family [Porphyromonas asaccharolytica PR426713P-I] gi|312924601|gb|EFR35372.1| methyltransferase, HemK family [Porphyromonas asaccharolytica PR426713P-I] Length = 298 Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 59/217 (27%), Positives = 92/217 (42%), Gaps = 11/217 (5%) Query: 7 SHSFLCRVTGLSSHQVIVDPD-SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 S L +T LS ++D L D + +L A+ R E I ILG F + L Sbjct: 33 SEMLLQHITQLSQTNYLLDRKVRQLSDTEAVWLRQALERLAHDEPIQYILGVAPFGSFDL 92 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 T+ PRPET L + L +R+LD+G G+ + + + P ++ Sbjct: 93 TVGRGVLIPRPETAELCELILTR---HAATEAPLRLLDVGCGSACIPIYIGSHRPDWQLY 149 Query: 126 GVDISCKALEIAKSNAVTNGVSER------FDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179 +D S +AL A N GV+ + FD + D++VSNPPYI Sbjct: 150 AMDQSEQALYYAAQNVRQTGVAVQLLRGDLFDWSLGKSLPATLPPIDLLVSNPPYIPECD 209 Query: 180 VDCLGLEVRDFDPRISL-DGGIDGLSHYRTIADGVSR 215 + V + +P+ +L D L +YR +A V + Sbjct: 210 KATMRPNVLEGEPQEALFVPDADPLRYYRALAALVPQ 246 >gi|110644807|ref|YP_672537.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli 536] gi|191174543|ref|ZP_03036040.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli F11] gi|300992719|ref|ZP_07179996.1| methyltransferase small domain protein [Escherichia coli MS 200-1] gi|123147328|sp|Q0T8U3|RSMC_ECOL5 RecName: Full=Ribosomal RNA small subunit methyltransferase C; AltName: Full=16S rRNA m2G1207 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rsmC gi|110346399|gb|ABG72636.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli 536] gi|190905189|gb|EDV64831.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli F11] gi|300305215|gb|EFJ59735.1| methyltransferase small domain protein [Escherichia coli MS 200-1] gi|323189785|gb|EFZ75063.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli RN587/1] gi|324007717|gb|EGB76936.1| methyltransferase small domain protein [Escherichia coli MS 57-2] gi|324014050|gb|EGB83269.1| methyltransferase small domain protein [Escherichia coli MS 60-1] Length = 343 Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 38/122 (31%), Positives = 61/122 (50%), Gaps = 23/122 (18%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LD+G G G + +A + SP + D+S A+E +++ TNGV + S+ FS Sbjct: 199 KVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLATNGVEG--EVFASNVFS 256 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 V+G FD+I+SNPP+ + + + SLD +T+ G RHLN Sbjct: 257 EVKGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 295 Query: 220 DG 221 G Sbjct: 296 GG 297 >gi|306815434|ref|ZP_07449583.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli NC101] gi|305851096|gb|EFM51551.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli NC101] Length = 343 Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 38/122 (31%), Positives = 61/122 (50%), Gaps = 23/122 (18%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LD+G G G + +A + SP + D+S A+E +++ TNGV + S+ FS Sbjct: 199 KVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLATNGVEG--EVFASNVFS 256 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 V+G FD+I+SNPP+ + + + SLD +T+ G RHLN Sbjct: 257 EVKGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 295 Query: 220 DG 221 G Sbjct: 296 GG 297 >gi|332299427|ref|YP_004441348.1| modification methylase, HemK family [Porphyromonas asaccharolytica DSM 20707] gi|332176490|gb|AEE12180.1| modification methylase, HemK family [Porphyromonas asaccharolytica DSM 20707] Length = 302 Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 59/217 (27%), Positives = 92/217 (42%), Gaps = 11/217 (5%) Query: 7 SHSFLCRVTGLSSHQVIVDPD-SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 S L +T LS ++D L D + +L A+ R E I ILG F + L Sbjct: 37 SEMLLQHITQLSQTNYLLDRKVRQLSDTEAVWLRQALERLAHDEPIQYILGVAPFGSFDL 96 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 T+ PRPET L + L +R+LD+G G+ + + + P ++ Sbjct: 97 TVGRGVLIPRPETAELCELILTR---HAATEAPLRLLDVGCGSACIPIYIGSHRPDWQLY 153 Query: 126 GVDISCKALEIAKSNAVTNGVSER------FDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179 +D S +AL A N GV+ + FD + D++VSNPPYI Sbjct: 154 AMDQSEQALYYAAQNVRQTGVAVQLLRGDLFDWSLGKSLPATLPPIDLLVSNPPYIPECD 213 Query: 180 VDCLGLEVRDFDPRISL-DGGIDGLSHYRTIADGVSR 215 + V + +P+ +L D L +YR +A V + Sbjct: 214 KATMRPNVLEGEPQEALFVPDADPLRYYRALAALVPQ 250 >gi|88703454|ref|ZP_01101170.1| Hypothetical adenine-specific methylase [Congregibacter litoralis KT71] gi|88702168|gb|EAQ99271.1| Hypothetical adenine-specific methylase [Congregibacter litoralis KT71] Length = 321 Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 55/207 (26%), Positives = 88/207 (42%), Gaps = 5/207 (2%) Query: 28 SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALA 87 SV DD L R L+ + + + G F + PR L+ + A Sbjct: 78 SVSDDGWATTLAWLQERILERKPLPYVTGRAWFAGLEFLCDERALVPRSPLAELIRNNYA 137 Query: 88 FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147 P +LDL G G + +A P + V DI AL +A+ N + V+ Sbjct: 138 ---PWWTGESPQSLLDLCCGGGCIGIAAAVHQPNLEVVIADIDEAALTLARENIGLHKVA 194 Query: 148 ERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206 R QSD ++G FD+I+ NPPY+++ + + E +P ++L G DGL Sbjct: 195 ARVSAAQSDLLDDLQGSRFDIILCNPPYVDAEDLAAMPAEFL-AEPPLALGSGSDGLDIS 253 Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKV 233 R + V +L GL +E+G + + Sbjct: 254 RRLLRNVGDYLTPRGLLFLEVGNSWEA 280 >gi|307825498|ref|ZP_07655716.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Methylobacter tundripaludum SV96] gi|307733384|gb|EFO04243.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Methylobacter tundripaludum SV96] Length = 310 Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 66/245 (26%), Positives = 106/245 (43%), Gaps = 31/245 (12%) Query: 9 SFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLS 68 ++L V L+ Q ++D ++D R + A L HE+I F + + Sbjct: 61 AYLESVLTLTERQAVID---MIDRRINERIPAAY---LTHEAI--------FAGLSFYVD 106 Query: 69 SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128 PR L++ A P +++ VVRILDL TG+ + +A VD Sbjct: 107 ERVLVPRSPIAELIEQRFA---PWVDEEQVVRILDLCTGSACIAIACAYAFADAYVDAVD 163 Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEV 187 +S AL +A+ N + +++ QSD F + + +D+IVSNPPY+ + L E Sbjct: 164 LSADALAVAELNVAKHQLADAVTLYQSDLFKELPDTRYDIIVSNPPYVCLEEWEQLPAEF 223 Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLV 247 R +P + GG GL I ++L G+ VE+G + + L Sbjct: 224 RA-EPDMGFKGGHTGLDIVLRILVDADQYLADQGILVVEVGSSAET------------LQ 270 Query: 248 NAFKD 252 NAF D Sbjct: 271 NAFPD 275 >gi|12045114|ref|NP_072925.1| HemK family modification methylase [Mycoplasma genitalium G37] gi|255660258|ref|ZP_05405667.1| HemK family modification methylase [Mycoplasma genitalium G37] gi|2496352|sp|Q49404|Y259_MYCGE RecName: Full=Uncharacterized protein MG259 gi|1045951|gb|AAC71479.1| modification methylase, HemK family [Mycoplasma genitalium G37] gi|166078831|gb|ABY79449.1| modification methylase, HemK family [synthetic Mycoplasma genitalium JCVI-1.0] Length = 456 Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 46/167 (27%), Positives = 83/167 (49%), Gaps = 22/167 (13%) Query: 38 LTNAIVRSLKHESIHRI-----LGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPR 92 LT+ I + LK I +I LG + F PR ++ L+ S Sbjct: 52 LTDKIKQQLKCYFIEKIPLPYLLGTIQLRKLTFKTKKGVFIPRIDSLALIAS-------- 103 Query: 93 IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152 + + + LDL G+G + +AL K+ G DI +AL++A+ NA+ N VS + Sbjct: 104 VNLKKIKTALDLCCGSGTLAIALKKKCDTLDVYGSDIDIQALKLAQQNALINNVS--INW 161 Query: 153 LQSDW---FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL 196 +++DW F+ ++ D+IV+NPPY++ ++ + +++P+ SL Sbjct: 162 IEADWFDCFNKIKTPIDLIVTNPPYLKKTQLN----KTLNYEPKHSL 204 >gi|38233636|ref|NP_939403.1| HemK family methytransferase [Corynebacterium diphtheriae NCTC 13129] gi|38199896|emb|CAE49562.1| HemK-family methytransferase [Corynebacterium diphtheriae] Length = 272 Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 52/185 (28%), Positives = 84/185 (45%), Gaps = 9/185 (4%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101 + R E + IL F + L + F PRPETE+L D A+ + + D+V Sbjct: 56 VERRKNREPLQHILQVTWFGPLELHVGPGVFIPRPETEVLADWAVRHT----DSEDIV-- 109 Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 +DL TG+GA+ + E P V++S A+ A+ N + D + + Sbjct: 110 VDLCTGSGALAAYIAHEHPECSVWAVELSDAAMAFARRNLPDRVHLVQGDVTDPEILDHL 169 Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221 G D++VSNPPY+ + + L EV DP +++ G G+ + + R L G Sbjct: 170 SGAVDLLVSNPPYVP--LSNDLEPEVYQ-DPSMAVFSGDSGMDTINAMIPVIYRLLAPGG 226 Query: 222 LCSVE 226 L +E Sbjct: 227 LVGIE 231 >gi|57641608|ref|YP_184086.1| N5-glutamine methyltransferase, HemK family [Thermococcus kodakarensis KOD1] gi|57159932|dbj|BAD85862.1| N5-glutamine methyltransferase, HemK family [Thermococcus kodakarensis KOD1] Length = 194 Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 42/117 (35%), Positives = 66/117 (56%), Gaps = 11/117 (9%) Query: 59 DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118 ++ +R+ L +EP +T LL ++ LA + I LD+GTGTG + L L ++ Sbjct: 4 EYQGLRIKLHPQVYEPAEDTFLLAEN-LAVKVGDIA-------LDMGTGTGIIALLLARK 55 Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYI 175 + + +GVDI+ A+E+A+ NA NG+ + SD F +V G FDVI N PY+ Sbjct: 56 ARWV--LGVDINPLAVELARENARINGII-NVEFRLSDLFENVSGEFDVITFNAPYL 109 >gi|323975871|gb|EGB70967.1| methyltransferase small domain-containing protein [Escherichia coli TW10509] Length = 343 Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 38/122 (31%), Positives = 60/122 (49%), Gaps = 23/122 (18%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LD+G G G + +A + SP + D+S A+E +++ NGV + S+ FS Sbjct: 199 KVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVEG--EVFASNVFS 256 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 V+G FD+I+SNPP+ E + + SLD +T+ G RHLN Sbjct: 257 EVKGRFDMIISNPPFHEGM--------------QTSLDAA-------QTLIRGAVRHLNS 295 Query: 220 DG 221 G Sbjct: 296 GG 297 >gi|300928502|ref|ZP_07144028.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Escherichia coli MS 187-1] gi|300463497|gb|EFK26990.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Escherichia coli MS 187-1] Length = 172 Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 40/124 (32%), Positives = 65/124 (52%), Gaps = 2/124 (1%) Query: 106 TGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL- 164 TG+G + +A P + VDIS AL +A+ N +G+ ++SD F + + Sbjct: 3 TGSGCIAIACAYAFPDAEVDAVDISPDALAVAEQNIEEHGLIHNVIPIRSDLFRDLPKVQ 62 Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224 +D+IV+NPPY+++ + L E R +P + L G DGL R I + +L DG+ Sbjct: 63 YDLIVTNPPYVDAEDMSDLPNEYR-HEPELGLASGTDGLKLTRRILGNAADYLADDGVLI 121 Query: 225 VEIG 228 E+G Sbjct: 122 CEVG 125 >gi|294786651|ref|ZP_06751905.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Parascardovia denticolens F0305] gi|315226254|ref|ZP_07868042.1| methyltransferase [Parascardovia denticolens DSM 10105] gi|294485484|gb|EFG33118.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Parascardovia denticolens F0305] gi|315120386|gb|EFT83518.1| methyltransferase [Parascardovia denticolens DSM 10105] Length = 327 Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 64/239 (26%), Positives = 103/239 (43%), Gaps = 20/239 (8%) Query: 38 LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR- 96 L + R E + I+G F + + + F PR ETE LV L + ++++ Sbjct: 88 LQERVGRRAAREPLQYIIGKAPFRYLTVAVGPGVFIPRQETETLVQIGLDW----VDEQA 143 Query: 97 -DVVRILDLGTGTGAVCLALLKESPFFKG--VGVDISCKALEIAKSNA-----VTNGVSE 148 D ILDL G+G V LA + E K V+I +A+ + N + Sbjct: 144 IDAPVILDLCAGSGVVGLAAVTELQARKAQVYAVEIDDQAIAWTRKNRDQILWSRPELKS 203 Query: 149 RFDTLQSDW-----FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI-DG 202 R+ +Q+D + ++ D++++NPPY+ + EVRD+DP ++L GG DG Sbjct: 204 RYQLVQADASSPQTLAQLDDQADLVLTNPPYVPLTQIPQQP-EVRDYDPDVALYGGSDDG 262 Query: 203 LSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 L I + L GL +E +Q +V S + D G DR L+ Sbjct: 263 LVIPEKIVRRAAAFLRPGGLLVMEHDSSQSHALVSFATSVGFSQAHTAPDLTGRDRFLV 321 >gi|302345995|ref|YP_003814348.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Prevotella melaninogenica ATCC 25845] gi|302149582|gb|ADK95844.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Prevotella melaninogenica ATCC 25845] Length = 287 Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 55/196 (28%), Positives = 88/196 (44%), Gaps = 8/196 (4%) Query: 38 LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELL---VDSALAFSLPRIE 94 L I+R + E + +LG F ++ PRPETE+L ++ ++ Sbjct: 54 LEKIILRLERSEPVQYVLGRETFCGRTFHVAPGVLIPRPETEVLCRWIEEDNNGCYCALQ 113 Query: 95 KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---D 151 +++LD+GTG+G + + L + DIS AL IA+ N V D Sbjct: 114 PPAPLQVLDVGTGSGCIAVTLAADLRNSAVTAWDISGDALLIARENVHQWQVRVELKMED 173 Query: 152 TLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL-DGGIDGLSHYRTIA 210 L ++++ FD+IVSNPPYI + V ++P +L D L YR IA Sbjct: 174 ALHPS-AAAMQQQFDIIVSNPPYICDKERTGMAKNVLAYEPETALFVPDDDPLRFYRAIA 232 Query: 211 DGVSRHLNKDGLCSVE 226 + + L+ DG+ E Sbjct: 233 EYGVQALSADGVLYFE 248 >gi|319779618|ref|YP_004130531.1| Hypothetical adenine-specific methylase yfcB [Taylorella equigenitalis MCE9] gi|317109642|gb|ADU92388.1| Hypothetical adenine-specific methylase yfcB [Taylorella equigenitalis MCE9] Length = 313 Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 39/105 (37%), Positives = 64/105 (60%), Gaps = 3/105 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 +ILD+ TG+G + + + PF + GVDIS A++IAK N + V + F + SD FS Sbjct: 138 KILDMCTGSGCLGILVALIYPFAEVDGVDISDAAIKIAKLNKDKHNV-QNFHPIVSDLFS 196 Query: 160 -SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203 + + +D+I+ NPPY+ SV + L E ++P+++L GG G+ Sbjct: 197 FNPDYKYDLIICNPPYVNSVSMQNLPPEY-GYEPQLALAGGEKGM 240 >gi|7476090|pir||T09985 protoporphyrinogen oxidase homolog - Mycobacterium leprae gi|699335|gb|AAA63096.1| hemK [Mycobacterium leprae] Length = 191 Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 44/142 (30%), Positives = 70/142 (49%), Gaps = 8/142 (5%) Query: 34 QRFF--LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLP 91 + FF ++A+ + + ++G F V L + D F PRPETE ++ +A LP Sbjct: 51 EEFFRRYSDAVAARSRRVPLQHLIGTVSFGPVVLHVGPDVFIPRPETEAILAWVMAQRLP 110 Query: 92 RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS-ERF 150 +R V I+D TG+GA+ +AL P + +G+D S AL+ A+ NA V R Sbjct: 111 ---ERPV--IVDACTGSGALAVALAHHRPAARVIGIDDSDSALDYARRNAEGTAVECVRA 165 Query: 151 DTLQSDWFSSVEGLFDVIVSNP 172 D ++G D+ V+ P Sbjct: 166 DVTTPALLPELDGCVDLFVAQP 187 >gi|238060789|ref|ZP_04605498.1| modification methylase hemK [Micromonospora sp. ATCC 39149] gi|237882600|gb|EEP71428.1| modification methylase hemK [Micromonospora sp. ATCC 39149] Length = 329 Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 57/207 (27%), Positives = 89/207 (42%), Gaps = 30/207 (14%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELL----VDSALAFSLPRIEKRD 97 + R + E + + G F ++ L + F PRPETELL VD A R+ D Sbjct: 55 VARRVAREPLQHLTGKAAFRHLELAVGPGVFVPRPETELLAGWGVDQA------RLRACD 108 Query: 98 VVR-----------ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146 ++DL +G+GA+ LA+ +E+P + V V+ S AL + NA Sbjct: 109 PTAGGGQGATGGPLVVDLCSGSGAIALAVAQEAPAARVVAVERSPAALAWLRRNAADRAA 168 Query: 147 SER-------FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199 + D + G DV++ NPPY+ + + EV DP ++ GG Sbjct: 169 AGDRPVEVVAADVTDPGLLGELVGRVDVLLCNPPYVPRAVQ--VPPEVAAHDPDEAVFGG 226 Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSVE 226 DGL R + ++ L G+ VE Sbjct: 227 ADGLDVIRPVLARAAQLLRPGGVLGVE 253 >gi|325973694|ref|YP_004250758.1| hypothetical protein MSU_0868 [Mycoplasma suis str. Illinois] gi|323652296|gb|ADX98378.1| conserved hypothetical protein [Mycoplasma suis str. Illinois] Length = 276 Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 50/171 (29%), Positives = 82/171 (47%), Gaps = 32/171 (18%) Query: 58 RDFYNVR-LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI-------LDLGTGTG 109 R F+N + L F PR E+ELLV RI K V + +DL +G+G Sbjct: 71 RVFFNQKKWFLFQGVFSPRIESELLV---------RILKDWVKELNLYSFSYIDLCSGSG 121 Query: 110 AVCLALLKE--SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW--FSSVEGLF 165 + L++L+E S +GV +D S +A + N+ + + + + +DW + + + Sbjct: 122 VIFLSVLEELNSYIKRGVAIDSSFRACKNISKNSELSKDNSKIEIYLTDWVKYLTKNSEW 181 Query: 166 DVIVSNPPYIESVIVD-----CLGLEVRDFDPRISLDGGIDGLSHYRTIAD 211 DVI NPPY+ + CLG DP+ +L G + G SHY+ + + Sbjct: 182 DVITINPPYLSEKELKESKEFCLG------DPKWALQGALQGWSHYQKMLE 226 >gi|309390256|gb|ADO78136.1| methyltransferase small [Halanaerobium praevalens DSM 2228] Length = 239 Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 34/97 (35%), Positives = 56/97 (57%), Gaps = 6/97 (6%) Query: 83 DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142 DS L + ++ + D +++DLGTG+G + L L ++P K GV+I +A +A+ N Sbjct: 26 DSVLLANFVKLRRGD--QVIDLGTGSGVIPLLLAYKNPEIKVTGVEIQAEAAALAQKNVE 83 Query: 143 TNGVSERFDTLQSDWFS----SVEGLFDVIVSNPPYI 175 N +SE+ + + D + G FDV+VSNPPY+ Sbjct: 84 FNNLSEQIEIVNQDLCTLDSKYKTGSFDVVVSNPPYL 120 >gi|308063857|gb|ADO05744.1| protoporphyrinogen oxidase (hemK) [Helicobacter pylori Sat464] Length = 276 Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 50/181 (27%), Positives = 80/181 (44%), Gaps = 24/181 (13%) Query: 30 LDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFS 89 L+ ++ + + L I +L DFY ++ PRPETE+LV AL Sbjct: 48 LNHKEEVCFFELVEKRLNDCPIEYLLESCDFYGRSFFVNKHVLIPRPETEILVKKALDI- 106 Query: 90 LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 I + + I ++G G+ V ++L E+P DIS KALE+A N + ER Sbjct: 107 ---ISQYHLKEIGEIGIGSACVSVSLALENPKISIHASDISLKALEVASKNIERFNLKER 163 Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDF--------DPRISLDGGID 201 ++ + + + ++VSNPPYI RD+ +P +L GG+ Sbjct: 164 VFLKKTRLWDRMPTI-QMLVSNPPYI-----------ARDYPLEKSVLKEPHEALFGGVK 211 Query: 202 G 202 G Sbjct: 212 G 212 >gi|262366650|gb|ACY63207.1| hypothetical protein YPD8_2534 [Yersinia pestis D182038] Length = 254 Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 37/111 (33%), Positives = 60/111 (54%), Gaps = 2/111 (1%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ILD+ TG+G + +A P + VDIS L + + N +G+ + ++SD F Sbjct: 135 HILDMCTGSGCIAIACAYAFPDAEVDAVDISNDVLAVTEHNIQQHGMEHQVTPIRSDLFR 194 Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209 + + +D+IV+NPPY+++ + L E R F+P + L G DGL R I Sbjct: 195 DLPPIKYDLIVTNPPYVDAEDMADLPQEFR-FEPELGLAAGSDGLKLARRI 244 >gi|325860412|ref|ZP_08173524.1| methyltransferase, HemK family [Prevotella denticola CRIS 18C-A] gi|325482070|gb|EGC85091.1| methyltransferase, HemK family [Prevotella denticola CRIS 18C-A] Length = 275 Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 59/234 (25%), Positives = 105/234 (44%), Gaps = 26/234 (11%) Query: 38 LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELL---VDSALAFSLPRIE 94 L + R + E + +LG+ F ++S PRPETE+L ++ ++ Sbjct: 42 LEKIMSRLERAEPVQYVLGYAMFCGRPFHVASGVLIPRPETEVLCRWIEEDYNRPYCALQ 101 Query: 95 KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154 +++LD+GTG+G + ++L + D+S AL IA+ N + R + Sbjct: 102 PPVPLQVLDVGTGSGCIAVSLALDLYNSALTAWDVSGDALLIAREN--IHRWDARVELKM 159 Query: 155 SDWF----SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL-DGGIDGLSHYRTI 209 D +++E +D+IVSNPPYI + + V +++P +L D L YR + Sbjct: 160 EDALHPSPAAMEQQWDIIVSNPPYICNRERAAMAANVLEYEPETALFVPDDDPLQFYRAV 219 Query: 210 ADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL--VNAFKDYGGNDRVLL 261 A+ + L+ +G V FE+ L++ V D G +V+L Sbjct: 220 AEYGVQTLSDEG--------------VLYFETNPLYINKVKEMLDESGYKQVML 259 >gi|297380251|gb|ADI35138.1| methyltransferase, HemK family [Helicobacter pylori v225d] Length = 276 Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 44/145 (30%), Positives = 70/145 (48%), Gaps = 7/145 (4%) Query: 31 DDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSL 90 ++ RFF + + L I +L DFY ++ PRPETE+LV AL Sbjct: 51 EEEARFF--ELVEKRLNDCPIEYLLESCDFYGRSFFVNEHVLIPRPETEILVKKALDI-- 106 Query: 91 PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150 I + + I ++G G+ V ++L E+P DIS KALE+A N + ER Sbjct: 107 --ISQYHLKEIGEIGIGSACVSVSLALENPKISIHASDISLKALEVASKNIERFNLKERV 164 Query: 151 DTLQSDWFSSVEGLFDVIVSNPPYI 175 ++ + + + +++SNPPYI Sbjct: 165 FLKKTHLWDRMPTI-QMLISNPPYI 188 >gi|297570957|ref|YP_003696731.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Arcanobacterium haemolyticum DSM 20595] gi|296931304|gb|ADH92112.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Arcanobacterium haemolyticum DSM 20595] Length = 281 Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 66/239 (27%), Positives = 110/239 (46%), Gaps = 14/239 (5%) Query: 27 DSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL 86 D + + R F I R E + I+G F + L F RPETE++ + L Sbjct: 43 DLITPEHAREFAAT-ITRRASFEPVQHIMGKMWFRYLELASRPGVFIVRPETEMVAQAGL 101 Query: 87 AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK--GVGVDISCKALEIAKSNAVTN 144 +L ++ + V ++DL TG+GA+ +A+ E P + V D + AL A + N Sbjct: 102 D-ALEKMTVENPV-VVDLCTGSGAIAIAIATEKPRTRVWAVERDETAYALATANNERYGN 159 Query: 145 GVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL-DGGIDGL 203 V+ +++ + +E D++++NPPY+ L +V DP ++L GG DGL Sbjct: 160 RVTIVHGDARTE-LAHLESAVDLLITNPPYVPR--TQELPADVHR-DPDLALYGGGDDGL 215 Query: 204 SHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAF--KDYGGNDRVL 260 RT+ L G+ +E G Q +V E+ + +A+ +D G DR L Sbjct: 216 DVPRTLVHRAHTLLRPGGVFVMEHGDEQGPALV--AEAIETGFTHAYTGRDLTGRDRWL 272 >gi|308183178|ref|YP_003927305.1| protoporphyrinogen oxidase (hemK) [Helicobacter pylori PeCan4] gi|308065363|gb|ADO07255.1| protoporphyrinogen oxidase (hemK) [Helicobacter pylori PeCan4] Length = 276 Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 63/234 (26%), Positives = 101/234 (43%), Gaps = 25/234 (10%) Query: 31 DDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSL 90 ++ RFF + + L I +L DFY ++ PRPETE+LV AL Sbjct: 51 EEEVRFF--ELVEKRLNDCPIEYLLESCDFYGRSFFVNEHVLIPRPETEILVKKALDI-- 106 Query: 91 PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150 I + + I ++G G+ V ++L E+P DIS K LE+A N + ER Sbjct: 107 --ISQYHLKEIGEIGIGSACVSVSLALENPKISIHASDISPKVLEVASKNIERFNLKERV 164 Query: 151 DTLQSDWFSSVEGLFDVIVSNPPYI------ESVIVDCLGLEVRDFDPRISLDGGIDGLS 204 ++ + + + ++VSNPPYI E ++ +P +L GG+ G Sbjct: 165 FLKKTHLWDRMPTI-QMLVSNPPYIARGYPLEKSVLK---------EPHEALFGGVKGDE 214 Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258 + I +R K + E+GY+Q + E + +KD G DR Sbjct: 215 ILKEIVFLSARL--KIPFLACEMGYDQLKSLKECLEFCG-YDAEFYKDLSGFDR 265 >gi|237729269|ref|ZP_04559750.1| 16S ribosomal RNA methyltransferase [Citrobacter sp. 30_2] gi|226908998|gb|EEH94916.1| 16S ribosomal RNA methyltransferase [Citrobacter sp. 30_2] Length = 343 Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 38/122 (31%), Positives = 60/122 (49%), Gaps = 23/122 (18%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LD+G G G + +AL SP + D+S A+E +++ NG+ D + S+ FS Sbjct: 199 KVLDVGCGAGVLSVALASHSPKVRLTLCDVSAAAVEASRATLAANGIEG--DVIASNVFS 256 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 V G FD+I+SNPP+ + + + SLD +T+ G RHLN Sbjct: 257 DVTGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 295 Query: 220 DG 221 G Sbjct: 296 GG 297 >gi|110808160|ref|YP_691680.1| 16S ribosomal RNA m2G1207 methyltransferase [Shigella flexneri 5 str. 8401] gi|122956950|sp|Q0SX40|RSMC_SHIF8 RecName: Full=Ribosomal RNA small subunit methyltransferase C; AltName: Full=16S rRNA m2G1207 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rsmC gi|110617708|gb|ABF06375.1| putative enzyme [Shigella flexneri 5 str. 8401] Length = 343 Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 37/122 (30%), Positives = 60/122 (49%), Gaps = 23/122 (18%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LD+G G G + +A + SP + D+S A+E +++ NGV + S+ FS Sbjct: 199 KVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVES--EVFASNVFS 256 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 V+G FD+I+SNPP+ + + + SLD +T+ G RHLN Sbjct: 257 EVKGCFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 295 Query: 220 DG 221 G Sbjct: 296 GG 297 >gi|183220544|ref|YP_001838540.1| modification methylase HemK [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189910654|ref|YP_001962209.1| polypeptide chain release factor methylase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167775330|gb|ABZ93631.1| Methylase of polypeptide chain release factors [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167778966|gb|ABZ97264.1| Modification methylase HemK [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 295 Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 51/159 (32%), Positives = 77/159 (48%), Gaps = 6/159 (3%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLP-RIEKRDVVR 100 IV K + + I G + F+ +S D PRPETE LVD R E D + Sbjct: 66 IVERSKRKPVAYITGKKGFHQFEYLVSEDVLIPRPETEELVDFLFKQKETLRTEFPDGFQ 125 Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT---NGVSERFDTLQSDW 157 I DL +G+G + L+L + V DIS +A++ +K+NA G+ L Sbjct: 126 IWDLCSGSGCIGLSLSQLLEPKAVVLSDISEEAIQQSKANAEKYQLTGIQFYVSNLDESL 185 Query: 158 FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL 196 + + FD+IVSNPPYI + +V D++P ++L Sbjct: 186 PNHLR--FDIIVSNPPYIPDSEKKDIMPDVLDYEPHLAL 222 >gi|258647711|ref|ZP_05735180.1| protein-(glutamine-N5) methyltransferase [Prevotella tannerae ATCC 51259] gi|260852548|gb|EEX72417.1| protein-(glutamine-N5) methyltransferase [Prevotella tannerae ATCC 51259] Length = 280 Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 60/216 (27%), Positives = 90/216 (41%), Gaps = 16/216 (7%) Query: 49 ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108 E + +LG F +S PRPETE LV A E LD+GTG+ Sbjct: 80 EPVQYVLGATYFDGRPFYVSPAVLIPRPETEELVRWA-------AEAARGQHFLDVGTGS 132 Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVI 168 G + ++L P DIS +A+++A NA G +F+ D F++ V+ Sbjct: 133 GCIAISLKLRRPEASVHAWDISPEAIDVACKNAECLGADVQFEV--QDLFTAPPKSATVV 190 Query: 169 VSNPPYIESVIVDCLGLEVRDFDPRISL-DGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227 VSNPPYI + V +F+P +L D L +Y+ +A + + VEI Sbjct: 191 VSNPPYICEKERAEMAAHVVNFEPVQALFVPDDDPLRYYKALAQLGAEEV------FVEI 244 Query: 228 GYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFC 263 + F + + KD G DR + C Sbjct: 245 NAALRQATADAFRAAGYQQIVCRKDEFGKDRFIYAC 280 >gi|159905280|ref|YP_001548942.1| methylase [Methanococcus maripaludis C6] gi|159886773|gb|ABX01710.1| methylase [Methanococcus maripaludis C6] Length = 202 Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 47/164 (28%), Positives = 84/164 (51%), Gaps = 15/164 (9%) Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 +R+ + P ++ELL+++ L ++ + V LD+GTG+G + +K+ Sbjct: 10 IRIKTHPKVYVPAEDSELLIEN-----LVDVKNKSV---LDVGTGSGIQAINAVKQGAS- 60 Query: 123 KGVGVDISCKALEIAKSNAVTNGV-SERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181 K +G+DI+ A+E AK NA N + S++ SD F +++ FDVI+ N PY+ + + Sbjct: 61 KVIGIDINPYAVECAKINAELNEIDSKKLSFKTSDLFRNIDEKFDVILFNAPYLPTSDEE 120 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225 L + + DGG DG D V+ +LN++G + Sbjct: 121 KLEKYL-----NYAFDGGKDGREVLDKFLDDVANYLNENGTVQI 159 >gi|261839806|gb|ACX99571.1| protoporphyrinogen oxidase (hemK) [Helicobacter pylori 52] Length = 276 Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 65/249 (26%), Positives = 101/249 (40%), Gaps = 39/249 (15%) Query: 32 DRQRFFLTNAIVRSLKHES----------------IHRILGWRDFYNVRLTLSSDTFEPR 75 ++R FL L HE I +L DFY ++ PR Sbjct: 34 QKERVFLHTHAYLELNHEEEACFFELVEKRLNDCPIEYLLESCDFYGRSFFVNEHVLIPR 93 Query: 76 PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135 PETE+LV AL I + + I ++G G+ V ++L E+P DIS KALE Sbjct: 94 PETEILVKKALDV----ISQYHLKEIGEIGIGSACVSVSLALENPKISIHASDISLKALE 149 Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYI------ESVIVDCLGLEVRD 189 +A N + ER ++ + + + +++SNPPYI E ++ Sbjct: 150 VASKNIERFNLKERVFLKKTHLWDRMPTI-QMLISNPPYIARGYPLEKSVLK-------- 200 Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249 +P +L GGI G + I + K + E+GY+Q + E + Sbjct: 201 -EPHEALFGGIKGDEILKEIIFLAAE--LKIPFLACEMGYDQLKSLKECLEFCG-YDAEF 256 Query: 250 FKDYGGNDR 258 +KD G DR Sbjct: 257 YKDLSGFDR 265 >gi|241895206|ref|ZP_04782502.1| methyltransferase [Weissella paramesenteroides ATCC 33313] gi|241871512|gb|EER75263.1| methyltransferase [Weissella paramesenteroides ATCC 33313] Length = 212 Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 29/74 (39%), Positives = 44/74 (59%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 +ILDLG G G V ++L K P V +I+ +A+E+ NA N V+++ +QSD + Sbjct: 68 KILDLGAGYGPVAISLAKVMPERAFVAAEINARAVELVARNAEQNHVAQQISVIQSDRYE 127 Query: 160 SVEGLFDVIVSNPP 173 V G F I++NPP Sbjct: 128 HVSGKFAAILTNPP 141 >gi|323939813|gb|EGB36015.1| methyltransferase small domain-containing protein [Escherichia coli E482] Length = 343 Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 37/122 (30%), Positives = 61/122 (50%), Gaps = 23/122 (18%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LD+G+G G + +A + SP + D+S A+E +++ NGV + S+ FS Sbjct: 199 KVLDVGSGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVEG--EVFASNVFS 256 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 V+G FD+I+SNPP+ + + + SLD +T+ G RHLN Sbjct: 257 EVKGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 295 Query: 220 DG 221 G Sbjct: 296 GG 297 >gi|6946701|dbj|BAA90668.1| protoporphyrinogen oxidase [Porphyromonas gingivalis] Length = 293 Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 74/262 (28%), Positives = 109/262 (41%), Gaps = 20/262 (7%) Query: 10 FLCRVTGLS-SHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLS 68 L T LS S ++ D D++L L+ + R + +G F ++ Sbjct: 31 LLTEATSLSRSALLLADKDTLLSTEASQALSRYLDRMKTGMPLQYAVGHAPFLGHEFAVN 90 Query: 69 SDTFEPRPETELLVDSALAFSLPRIEKRDVVR--ILDLGTGTGAVCLALLKESPFFKGVG 126 PRPETE LV+ L R E+ V +LD+GTG+G + + L +E K Sbjct: 91 PSVLIPRPETEELVELIL-----RKERPAAVPLCLLDVGTGSGCLAITLAREL-RAKVWA 144 Query: 127 VDISCKALEIAKSNAVTNGVSERF-----DTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181 +DIS AL A++N G +R D L D V D+IVSNPPYI Sbjct: 145 MDISSDALATARANV---GEDDRIFFFEGDILSPDNRWDVLPPVDIIVSNPPYIMPAESA 201 Query: 182 CLGLEVRDFDPRISLDGGI-DGLSHYRTIAD-GVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 + V +P ++L D L Y+ IA+ S L G VE+ +F Sbjct: 202 DMAYHVLGHEPALALFAPEDDPLLFYKAIANLSGSGKLRSGGRLYVELNPLLAEATCEVF 261 Query: 240 ESRKLFL-VNAFKDYGGNDRVL 260 +++ + V D G R L Sbjct: 262 SAKEGWCEVRLHADLSGKSRFL 283 >gi|241889584|ref|ZP_04776882.1| methyltransferase small [Gemella haemolysans ATCC 10379] gi|241863206|gb|EER67590.1| methyltransferase small [Gemella haemolysans ATCC 10379] Length = 198 Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 25/78 (32%), Positives = 48/78 (61%) Query: 96 RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155 ++ +++D+G G G + + L K+ P +K VD++ + LE++K N N + + L+S Sbjct: 56 KENAKVVDIGCGYGVISIFLAKKYPTYKFTMVDVNNRVLELSKKNIELNKIENEVEVLES 115 Query: 156 DWFSSVEGLFDVIVSNPP 173 F +V G FD++++NPP Sbjct: 116 SSFDNVVGTFDIVLTNPP 133 >gi|227503859|ref|ZP_03933908.1| rRNA or tRNA methylase [Corynebacterium striatum ATCC 6940] gi|227199482|gb|EEI79530.1| rRNA or tRNA methylase [Corynebacterium striatum ATCC 6940] Length = 296 Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 52/203 (25%), Positives = 91/203 (44%), Gaps = 28/203 (13%) Query: 43 VRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVD-------------SALAFS 89 R E + ILG F + L + F PRPETE+L D + A + Sbjct: 63 ARRAAREPLQHILGTAWFGPLELEVGPGVFIPRPETEVLADWGVRMLRDVAKHTAPTALT 122 Query: 90 LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 +P R++DL TG+GA+ + E P + V++S +A A+ N ++ E Sbjct: 123 VPASPP----RVVDLCTGSGALAGYVKHEMPEAEVYAVELSDEAFSYAQRN-LSRVAGEG 177 Query: 150 FDTLQSDWFSS-----VEGLFDVIVSNPPYIESVIVDCLGLEVRDF-DPRISLDGGIDGL 203 +Q D + ++G D++++NPPY+ + LE + DP +++ GG DG+ Sbjct: 178 LRLVQGDATAPATLRKLDGSVDLVLTNPPYVP----ETPDLEPEVYHDPHMAVFGGEDGM 233 Query: 204 SHYRTIADGVSRHLNKDGLCSVE 226 + + ++ L G +E Sbjct: 234 AIINRLVPRIAELLKPGGRVGIE 256 >gi|283783534|ref|YP_003374288.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Gardnerella vaginalis 409-05] gi|283441994|gb|ADB14460.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Gardnerella vaginalis 409-05] Length = 304 Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 50/182 (27%), Positives = 88/182 (48%), Gaps = 24/182 (13%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101 I R E + I+G F + L + F PRPETE++V++ L + R + + Sbjct: 66 ISRRASREPLQHIVGRAPFRYLDLQVGKGVFVPRPETEIVVEAGLDWL--RESGISKLTV 123 Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG-------VSERFDTLQ 154 +DL G+GA+ L++ E + V+ S +A + + N + R+ + Sbjct: 124 VDLCAGSGAIGLSIAAEVADAQVWAVEKSPEAFQYLQKNFEETAKKWENIQIFSRYHAVL 183 Query: 155 SDWFSS-----------VEGLFDVIVSNPPYI-ESVIVDCLGLEVRDFDPRISLDGG-ID 201 +D S + G D++++NPPY+ ES + + +EVR++DP ++L GG D Sbjct: 184 ADATKSHISDCTPELHAICGKVDLVITNPPYVPESQVPE--QVEVREYDPPVALYGGSAD 241 Query: 202 GL 203 GL Sbjct: 242 GL 243 >gi|158315911|ref|YP_001508419.1| HemK family modification methylase [Frankia sp. EAN1pec] gi|158111316|gb|ABW13513.1| modification methylase, HemK family [Frankia sp. EAN1pec] Length = 305 Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 57/204 (27%), Positives = 83/204 (40%), Gaps = 13/204 (6%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR- 100 + R + +LGW F +R+ + F PR TE LVD A A D R Sbjct: 65 VARRASGLPLEHVLGWVSFRGLRVAVDERVFVPRRRTEFLVDRAAAILAAGATVGDRARS 124 Query: 101 -----ILDLGTGTGAVCLALLK--ESPF-FKGVGVD---ISCKALEIAKSNAVTNGVSER 149 ++DL G+GAV AL P VD ++C + +T Sbjct: 125 AVGWVVVDLCCGSGAVGAALASAVRGPVDLHAADVDPVAVACARRNLTGPARITPAPGRV 184 Query: 150 FDT-LQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208 + L + + G D++V+N PY+ + + L E R +PR +LDGG DGL R Sbjct: 185 YTGDLYAPLPPVLRGRVDLLVANVPYVPTGRLGLLPPEARVHEPREALDGGSDGLDMLRR 244 Query: 209 IADGVSRHLNKDGLCSVEIGYNQK 232 +A + L G VE Q Sbjct: 245 VAAEATDWLAPGGSLLVETSRAQA 268 >gi|330983270|gb|EGH81373.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 187 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 49/157 (31%), Positives = 74/157 (47%), Gaps = 10/157 (6%) Query: 27 DSVLDDRQRFFLTNAIVRSLKHESIHRI-----LGWRDFYNVRLTLSSDTFEPRPETELL 81 DS LD R + + R +K R+ LG F + + PR L Sbjct: 13 DSYLDCRLEVDEISDLQRLIKRRIDERVPTPYLLGEAWFCGLSFIVDDRVLIPRSPIAEL 72 Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 ++ A L + RILDL TG+G + +A + P + D+S ALE+A N Sbjct: 73 IEERFAPWL----ADEPARILDLCTGSGCIGIACAEVFPDAEVALADLSYDALEVANQNI 128 Query: 142 VTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIES 177 +G+ +R T+Q D F + G FD+IVSNPPY+++ Sbjct: 129 ERHGMEDRVYTVQGDGFDGLPGQRFDLIVSNPPYVDA 165 >gi|288803442|ref|ZP_06408874.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Prevotella melaninogenica D18] gi|288334052|gb|EFC72495.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Prevotella melaninogenica D18] Length = 275 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 54/195 (27%), Positives = 89/195 (45%), Gaps = 6/195 (3%) Query: 38 LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELL---VDSALAFSLPRIE 94 L I+R + E + +LG F ++ PRPETE+L ++ ++ Sbjct: 42 LEKIILRLERSEPVQYVLGRETFCGRTFHVAPGVLIPRPETEVLCRWIEEDYNRPYCALQ 101 Query: 95 KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV--SERFDT 152 +++LD+GTG+G + + L + DIS AL +A+ N V + + Sbjct: 102 PPMPLQVLDVGTGSGCIAVTLAADLRNSAVTAWDISGDALLVARENVHQWQVRVELKMED 161 Query: 153 LQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL-DGGIDGLSHYRTIAD 211 + S+++ FDVIVSNPPYI + V ++P +L D L YR IA+ Sbjct: 162 VLHPSASAMQQKFDVIVSNPPYICDKERTEMEGNVLAYEPETALFVPDDDPLRFYRAIAE 221 Query: 212 GVSRHLNKDGLCSVE 226 + L+ DG+ E Sbjct: 222 YGVQALSADGVLYFE 236 >gi|217034309|ref|ZP_03439725.1| hypothetical protein HP9810_491g2 [Helicobacter pylori 98-10] gi|216943194|gb|EEC22661.1| hypothetical protein HP9810_491g2 [Helicobacter pylori 98-10] Length = 276 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 65/222 (29%), Positives = 96/222 (43%), Gaps = 39/222 (17%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110 I +L DFY ++ PRPETE+LV AL I + + +I ++G G+ Sbjct: 69 IEYLLESCDFYGHSFFVNEHVLIPRPETEILVKKALDI----ISQYHLKKIGEIGIGSAC 124 Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFD---- 166 V ++L E+P DIS KALE+A N ERF+ L+ F L+D Sbjct: 125 VSVSLALENPKISIHASDISPKALEVASKNI------ERFN-LKDRVFLKKTHLWDRMPT 177 Query: 167 --VIVSNPPYIESVIVDCLGLEVRDF--------DPRISLDGGIDGLSHYRTIADGVSRH 216 ++VSNPPYI RD+ +P +L GG+ G + I + Sbjct: 178 IQMLVSNPPYI-----------ARDYPLEKSVLKEPHEALFGGVKGDEILKEIIFLAAE- 225 Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258 K + E+GY+Q + E + +KD G DR Sbjct: 226 -LKIPFLACEMGYDQLKSLKECLEFCG-YDAEFYKDLSGFDR 265 >gi|157147620|ref|YP_001454940.1| 16S ribosomal RNA m2G1207 methyltransferase [Citrobacter koseri ATCC BAA-895] gi|226712936|sp|A8ALZ1|RSMC_CITK8 RecName: Full=Ribosomal RNA small subunit methyltransferase C; AltName: Full=16S rRNA m2G1207 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rsmC gi|157084825|gb|ABV14503.1| hypothetical protein CKO_03420 [Citrobacter koseri ATCC BAA-895] Length = 342 Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 38/122 (31%), Positives = 59/122 (48%), Gaps = 23/122 (18%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LD+G G G + AL SP + D+S A+E +++ NGV + S+ FS Sbjct: 199 KVLDVGCGAGVLSAALASHSPKVRLTLCDVSAPAVEASRATLAANGVEG--EVFASNVFS 256 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 V+G FD+I+SNPP+ + + + SLD +T+ G RHLN Sbjct: 257 DVKGRFDMIISNPPFHDGI--------------QTSLDAA-------QTLIHGAVRHLNS 295 Query: 220 DG 221 G Sbjct: 296 GG 297 >gi|186939583|dbj|BAG31010.1| putative methylase [Bosea sp. AJ110407] Length = 330 Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 45/140 (32%), Positives = 68/140 (48%), Gaps = 8/140 (5%) Query: 94 EKRDVVRILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVSERFD 151 E V R+LDL TG+ CLA++ F V++S AL++A+ N + +R Sbjct: 160 EPEAVDRVLDLCTGSA--CLAIIAAGRFPNAEVDAVELSPDALDVARLNVADYDLDDRVH 217 Query: 152 TLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210 Q D F ++G +D+I++NPPY+ + V E +P+++ G DGL I Sbjct: 218 LFQGDLFVPLDGQRYDLIIANPPYVTAEEVAAFPPEYAS-EPQMAHIAGNDGLDLVHRIL 276 Query: 211 DGVSRHLNKDG--LCSVEIG 228 HLN G LC V G Sbjct: 277 AQARNHLNPGGGLLCEVGTG 296 >gi|303243768|ref|ZP_07330109.1| methylase [Methanothermococcus okinawensis IH1] gi|302486010|gb|EFL48933.1| methylase [Methanothermococcus okinawensis IH1] Length = 210 Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 51/183 (27%), Positives = 91/183 (49%), Gaps = 27/183 (14%) Query: 53 RILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVC 112 +IL +D + + S +EP ++ELL+D+ L ++ + V LD+GTGTG Sbjct: 2 KILKIKD---ILIKTHSKVYEPAEDSELLLDN-----LVNVKNKTV---LDVGTGTGIQA 50 Query: 113 LALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT--LQSDWFSSVEGL------ 164 + +K+ +GVD++ ++EIAK NA+ N + + +SD F +++ + Sbjct: 51 INAIKKGAKI-VIGVDVNPYSIEIAKENALLNKLELNRNIFFFKSDLFKNMDEIMDKLNI 109 Query: 165 --FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL 222 FDVI+ N PY+ + + L + + DGGIDG VS +L ++G+ Sbjct: 110 KKFDVILFNAPYLPTSEEEKLEKYL-----NYAFDGGIDGRQVLDRFIHKVSHYLEENGI 164 Query: 223 CSV 225 + Sbjct: 165 IQI 167 >gi|169838091|ref|ZP_02871279.1| Methyltransferase [candidate division TM7 single-cell isolate TM7a] Length = 268 Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 60/171 (35%), Positives = 88/171 (51%), Gaps = 10/171 (5%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTG 109 + +L ++FY + + PR +TE+LV+ + ++ K ++ +ILD+G G+G Sbjct: 69 VQYLLNEQEFYGRKFYVDKGVLIPRQDTEILVEKMIDILKDKVLKNEIHPKILDIGVGSG 128 Query: 110 AV--CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFD 166 + AL ES + +GVDIS KALE A+ N VS L+SD F +VE FD Sbjct: 129 IIGITAALEIESSYV--LGVDISDKALETAQKNKEILKVS-NIKFLKSDLFENVEFREFD 185 Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217 +IVSNPPYI V + + +P +L DGL I V RHL Sbjct: 186 MIVSNPPYISLNEVGIMSDDTLLHEPSEALFAENDGLYF---IMKFVRRHL 233 >gi|256828516|ref|YP_003157244.1| methyltransferase small [Desulfomicrobium baculatum DSM 4028] gi|256577692|gb|ACU88828.1| methyltransferase small [Desulfomicrobium baculatum DSM 4028] Length = 268 Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 34/79 (43%), Positives = 49/79 (62%), Gaps = 5/79 (6%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD--- 156 R+LDLGTG G V L L + P F G+G+D++ L A+ NA G +ERF L++D Sbjct: 45 RVLDLGTGCGVVGLGLALDHPDFFGIGLDLNPDMLCHARENACRLGFAERFALLRADACG 104 Query: 157 -WFSSVEGLFDVIVSNPPY 174 W + E + D+++SNPPY Sbjct: 105 PWGFAPESM-DLVLSNPPY 122 >gi|321310998|ref|YP_004193327.1| hypothetical protein HF1_14800 [Mycoplasma haemofelis str. Langford 1] gi|319802842|emb|CBY93488.1| conserved hypothetical protein [Mycoplasma haemofelis str. Langford 1] Length = 276 Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 50/172 (29%), Positives = 83/172 (48%), Gaps = 12/172 (6%) Query: 50 SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVD--SALAFSLPRIEKRDVVRILDLGTG 107 +I RI F+ L D F PR ETEL+V+ + P ++K + V DL G Sbjct: 65 TIERICKKVFFHKHEFILHDDVFCPRNETELIVEYLNQEIKEDPALKKSNYV---DLCAG 121 Query: 108 TGAVCLAL-LKESPFFKGVG-VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGL 164 TG + +++ L+ FFK + VDIS +A++ K N + + ++ DW+ + E Sbjct: 122 TGVIGISIALQNEGFFKKIALVDISEEAIKNIKENCAKYNL--KASVVKQDWYEYLQENG 179 Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216 DVI +N PY+ D + + + +P +L DG HY + + R+ Sbjct: 180 ADVITANFPYVSK--EDDMDEHIMESEPDWALFADNDGWEHYDKVLKFIDRN 229 >gi|225164775|ref|ZP_03727005.1| Site-specific DNA-methyltransferase (adenine-specific) [Opitutaceae bacterium TAV2] gi|224800606|gb|EEG18972.1| Site-specific DNA-methyltransferase (adenine-specific) [Opitutaceae bacterium TAV2] Length = 266 Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 45/152 (29%), Positives = 74/152 (48%), Gaps = 8/152 (5%) Query: 89 SLPRIEKRDVV--RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146 +LPR+ V + D+ TG+G + + L + P + +D+S AL++A N + + Sbjct: 81 TLPRLFPSGVTPQNLADVCTGSGCLAVLLAHQFPSARVDALDLSRDALDVAAINIRNHKL 140 Query: 147 SERFDTLQSDWFSSVEG-----LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201 + R SD ++ +D+I+SNPPY S VD E + +PR++ DGG D Sbjct: 141 TTRVHLHASDVLDALPPPPLGPTYDLILSNPPYEPSAHVDNQAPEFK-AEPRLAHDGGPD 199 Query: 202 GLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233 GL R + L GL +E+G +K Sbjct: 200 GLIIIRKLLRQARDRLAPHGLVLMEVGALRKA 231 >gi|24115600|ref|NP_710110.1| 16S ribosomal RNA m2G1207 methyltransferase [Shigella flexneri 2a str. 301] gi|30065609|ref|NP_839780.1| 16S ribosomal RNA m2G1207 methyltransferase [Shigella flexneri 2a str. 2457T] gi|81837976|sp|Q820Z6|RSMC_SHIFL RecName: Full=Ribosomal RNA small subunit methyltransferase C; AltName: Full=16S rRNA m2G1207 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rsmC gi|24054937|gb|AAN45817.1| putative enzyme [Shigella flexneri 2a str. 301] gi|30043873|gb|AAP19592.1| putative enzyme [Shigella flexneri 2a str. 2457T] gi|281603708|gb|ADA76692.1| RRNA (Guanine-N(2)-)-methyltransferase [Shigella flexneri 2002017] gi|313646274|gb|EFS10736.1| ribosomal RNA small subunit methyltransferase C [Shigella flexneri 2a str. 2457T] gi|332748881|gb|EGJ79305.1| ribosomal RNA small subunit methyltransferase C [Shigella flexneri 4343-70] gi|332749133|gb|EGJ79556.1| ribosomal RNA small subunit methyltransferase C [Shigella flexneri K-671] gi|332749660|gb|EGJ80076.1| ribosomal RNA small subunit methyltransferase C [Shigella flexneri 2747-71] gi|332768755|gb|EGJ98934.1| 16S rRNA methyltransferase [Shigella flexneri 2930-71] gi|333009463|gb|EGK28919.1| ribosomal RNA small subunit methyltransferase C [Shigella flexneri K-218] gi|333022399|gb|EGK41637.1| ribosomal RNA small subunit methyltransferase C [Shigella flexneri K-304] Length = 343 Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 37/122 (30%), Positives = 60/122 (49%), Gaps = 23/122 (18%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LD+G G G + +A + SP + D+S A+E +++ NGV + S+ FS Sbjct: 199 KVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVEG--EVFASNVFS 256 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 V+G FD+I+SNPP+ + + + SLD +T+ G RHLN Sbjct: 257 EVKGCFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 295 Query: 220 DG 221 G Sbjct: 296 GG 297 >gi|333010461|gb|EGK29894.1| ribosomal RNA small subunit methyltransferase C [Shigella flexneri VA-6] Length = 343 Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 37/122 (30%), Positives = 60/122 (49%), Gaps = 23/122 (18%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LD+G G G + +A + SP + D+S A+E +++ NGV + S+ FS Sbjct: 199 KVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVEG--EVFASNVFS 256 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 V+G FD+I+SNPP+ + + + SLD +T+ G RHLN Sbjct: 257 EVKGCFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 295 Query: 220 DG 221 G Sbjct: 296 GG 297 >gi|237718552|ref|ZP_04549033.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] gi|293373068|ref|ZP_06619436.1| methyltransferase small domain protein [Bacteroides ovatus SD CMC 3f] gi|229452012|gb|EEO57803.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] gi|292631954|gb|EFF50564.1| methyltransferase small domain protein [Bacteroides ovatus SD CMC 3f] Length = 236 Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 59/169 (34%), Positives = 87/169 (51%), Gaps = 17/169 (10%) Query: 100 RILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW- 157 RILD+GTGTG V L L++ S P V ++I A+ A+ N + + ER + +Q+D+ Sbjct: 40 RILDIGTGTGLVALMLVQRSLPDANIVALEIDEAAVGQARENIIRSPWKERVEVVQADFR 99 Query: 158 -FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216 + S + FDVIVSNPPY VD L D + + D L+ Y + +GVS Sbjct: 100 KYRSSDK-FDVIVSNPPY----FVDSLECP----DRQRAAARHNDSLT-YEDLLEGVSGL 149 Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRKLFLV---NAFKDYGG-NDRVLL 261 L ++G +V I + V +I +KL+ V N GG RVL+ Sbjct: 150 LTENGFFTVVIPADVAERVKKIASIKKLYAVRQLNVITKPGGIPKRVLI 198 >gi|262282350|ref|ZP_06060118.1| methyltransferase domain-containing protein [Streptococcus sp. 2_1_36FAA] gi|262261641|gb|EEY80339.1| methyltransferase domain-containing protein [Streptococcus sp. 2_1_36FAA] Length = 197 Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 35/73 (47%), Positives = 47/73 (64%), Gaps = 3/73 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 ILDLG G G + L L+K S K VDI+ +AL++A+ NA NGVS + QS+ + Sbjct: 61 ILDLGCGYGPLGLTLVK-SQAVKATLVDINLRALDLARKNAELNGVSA--EIFQSNIYDQ 117 Query: 161 VEGLFDVIVSNPP 173 V G+FD I+SNPP Sbjct: 118 VTGVFDHIISNPP 130 >gi|194434182|ref|ZP_03066450.1| ribosomal RNA small subunit methyltransferase C [Shigella dysenteriae 1012] gi|194417619|gb|EDX33720.1| ribosomal RNA small subunit methyltransferase C [Shigella dysenteriae 1012] gi|320179333|gb|EFW54291.1| Ribosomal RNA small subunit methyltransferase C [Shigella boydii ATCC 9905] gi|332083687|gb|EGI88905.1| ribosomal RNA small subunit methyltransferase C [Shigella dysenteriae 155-74] Length = 343 Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 37/122 (30%), Positives = 60/122 (49%), Gaps = 23/122 (18%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LD+G G G + +A + SP + D+S A+E +++ NGV + S+ FS Sbjct: 199 KVLDIGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVEG--EVFASNVFS 256 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 V+G FD+I+SNPP+ + + + SLD +T+ G RHLN Sbjct: 257 EVKGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 295 Query: 220 DG 221 G Sbjct: 296 GG 297 >gi|28872664|ref|NP_795283.1| hypothetical protein PSPTO_5559 [Pseudomonas syringae pv. tomato str. DC3000] gi|28855920|gb|AAO58978.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato str. DC3000] Length = 324 Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 32/79 (40%), Positives = 47/79 (59%), Gaps = 1/79 (1%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 + R D+G GTGA L + P + VDI+ KAL A++NAV G+ + + SD Sbjct: 145 IKRAADIGCGTGAGALLIAVARPDAQVYAVDINPKALHFAQANAVVAGL-QNMECCHSDI 203 Query: 158 FSSVEGLFDVIVSNPPYIE 176 S + G FD+IV+NPPY++ Sbjct: 204 LSGLTGNFDLIVANPPYMK 222 >gi|330964404|gb|EGH64664.1| hypothetical protein PSYAC_07090 [Pseudomonas syringae pv. actinidiae str. M302091] Length = 301 Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 32/79 (40%), Positives = 47/79 (59%), Gaps = 1/79 (1%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 + R D+G GTGA L + P + VDI+ KAL A++NAV G+ + + SD Sbjct: 122 IKRAADIGCGTGAGALLIAVARPDAQVYAVDINPKALHFAQANAVVAGL-QNMECCHSDI 180 Query: 158 FSSVEGLFDVIVSNPPYIE 176 S + G FD+IV+NPPY++ Sbjct: 181 LSGLTGNFDLIVANPPYMK 199 >gi|260858545|ref|YP_003232436.1| 16S rRNA m2G1207 methylase RsmC [Escherichia coli O26:H11 str. 11368] gi|257757194|dbj|BAI28696.1| 16S rRNA m2G1207 methylase RsmC [Escherichia coli O26:H11 str. 11368] gi|323157742|gb|EFZ43847.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli EPECa14] Length = 343 Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 37/122 (30%), Positives = 60/122 (49%), Gaps = 23/122 (18%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LD+G G G + +A + SP + D+S A+E +++ NGV + S+ FS Sbjct: 199 KVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVEG--EVFASNVFS 256 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 V+G FD+I+SNPP+ + + + SLD +T+ G RHLN Sbjct: 257 EVKGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNN 295 Query: 220 DG 221 G Sbjct: 296 GG 297 >gi|215489682|ref|YP_002332113.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli O127:H6 str. E2348/69] gi|215267754|emb|CAS12216.1| 16S rRNA m2G1207 methylase [Escherichia coli O127:H6 str. E2348/69] Length = 343 Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 37/122 (30%), Positives = 60/122 (49%), Gaps = 23/122 (18%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LD+G G G + +A + SP + D+S A+E +++ NGV + S+ FS Sbjct: 199 KVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVEG--EVFASNVFS 256 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 V+G FD+I+SNPP+ + + + SLD +T+ G RHLN Sbjct: 257 EVKGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 295 Query: 220 DG 221 G Sbjct: 296 GG 297 >gi|188527854|ref|YP_001910541.1| protoporphyrinogen oxidase (hemK) [Helicobacter pylori Shi470] gi|188144094|gb|ACD48511.1| protoporphyrinogen oxidase (hemK) [Helicobacter pylori Shi470] Length = 276 Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 47/160 (29%), Positives = 70/160 (43%), Gaps = 21/160 (13%) Query: 32 DRQRFFLTNAIVRSLKHES----------------IHRILGWRDFYNVRLTLSSDTFEPR 75 ++R FL L HE I +L DFY ++ PR Sbjct: 34 QKERVFLHTHAYLELNHEEEVCFFELVEKRLNDCPIEYLLESCDFYGRSFFVNEHVLIPR 93 Query: 76 PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135 PETE+LV AL I + + I ++G G+ V ++L E+P DIS KALE Sbjct: 94 PETEILVKKALDI----ISQYHLKEIGEIGIGSACVSVSLALENPKISIHASDISLKALE 149 Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYI 175 +A N + ER ++ + + + ++VSNPPYI Sbjct: 150 VASKNIERFNLKERVFLKKTRLWDRMPTI-QMLVSNPPYI 188 >gi|193070621|ref|ZP_03051559.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli E110019] gi|192956104|gb|EDV86569.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli E110019] Length = 343 Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 37/122 (30%), Positives = 60/122 (49%), Gaps = 23/122 (18%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LD+G G G + +A + SP + D+S A+E +++ NGV + S+ FS Sbjct: 199 KVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVEG--EVFASNVFS 256 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 V+G FD+I+SNPP+ + + + SLD +T+ G RHLN Sbjct: 257 EVKGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 295 Query: 220 DG 221 G Sbjct: 296 GG 297 >gi|330878207|gb|EGH12356.1| hypothetical protein PSYMP_20644 [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 301 Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 32/79 (40%), Positives = 47/79 (59%), Gaps = 1/79 (1%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 + R D+G GTGA L + P + VDI+ KAL A++NAV G+ + + SD Sbjct: 122 IKRAADIGCGTGAGALLIAVARPDAQVYAVDINPKALHFAQANAVVAGL-QNMECCHSDI 180 Query: 158 FSSVEGLFDVIVSNPPYIE 176 S + G FD+IV+NPPY++ Sbjct: 181 LSGLTGNFDLIVANPPYMK 199 >gi|299752052|ref|XP_002911717.1| modification methylase [Coprinopsis cinerea okayama7#130] gi|298409656|gb|EFI28223.1| modification methylase [Coprinopsis cinerea okayama7#130] Length = 252 Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 44/134 (32%), Positives = 65/134 (48%), Gaps = 19/134 (14%) Query: 101 ILDLGTGTGAVCLALLKESP--FFKGVGVDISCKALEIAKSNAVTNGVSERFDTL--QSD 156 +LDLGTG+G + L L + P GVDIS AL +A NA G+ R D++ ++ Sbjct: 29 LLDLGTGSGCIPLLLCRLWPQGSLSATGVDISPHALSLANENAALCGIPPRSDSMTPRNT 88 Query: 157 WFSSVEGLF---------------DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201 + +S+ D+++SNPPYI L V +F+ +L GG Sbjct: 89 FRTSLANFLANDFPGTHLSSALPIDILISNPPYIPWDEYLELPESVVNFEDPKALFGGPS 148 Query: 202 GLSHYRTIADGVSR 215 GL HY IA ++R Sbjct: 149 GLEHYEAIARLLTR 162 >gi|309704829|emb|CBJ04180.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli ETEC H10407] Length = 343 Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 37/122 (30%), Positives = 60/122 (49%), Gaps = 23/122 (18%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LD+G G G + +A + SP + D+S A+E +++ NGV + S+ FS Sbjct: 199 KVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVEG--EVFASNVFS 256 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 V+G FD+I+SNPP+ + + + SLD +T+ G RHLN Sbjct: 257 EVKGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 295 Query: 220 DG 221 G Sbjct: 296 GG 297 >gi|254037381|ref|ZP_04871458.1| ribosomal RNA small subunit methyltransferase C [Escherichia sp. 1_1_43] gi|226840487|gb|EEH72489.1| ribosomal RNA small subunit methyltransferase C [Escherichia sp. 1_1_43] gi|323935213|gb|EGB31573.1| methyltransferase small domain-containing protein [Escherichia coli E1520] Length = 343 Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 37/122 (30%), Positives = 60/122 (49%), Gaps = 23/122 (18%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LD+G G G + +A + SP + D+S A+E +++ NGV + S+ FS Sbjct: 199 KVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVEG--EVFASNVFS 256 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 V+G FD+I+SNPP+ + + + SLD +T+ G RHLN Sbjct: 257 EVKGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 295 Query: 220 DG 221 G Sbjct: 296 GG 297 >gi|257068137|ref|YP_003154392.1| putative methylase of HemK family [Brachybacterium faecium DSM 4810] gi|256558955|gb|ACU84802.1| putative methylase of HemK family [Brachybacterium faecium DSM 4810] Length = 270 Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 45/190 (23%), Positives = 84/190 (44%), Gaps = 5/190 (2%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101 + R E + +LG + + +L++ F PR T LL++ +L R + Sbjct: 51 VRRRTAGEFLEHVLGAVEIFGEKLSVGPGVFVPRQRTALLIER----TLDACRGRAAPTV 106 Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 L+ G + + + P + +D AL A+ N + + R ++L + ++ Sbjct: 107 LEACCGVAPIAALVARRHPSAQVHAMDRDETALRHAQKNLPASARTHRAESL-AGLPPAL 165 Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221 G DV+ + PPY+ + + E RD +PR +L GG DGL+ R + +L G Sbjct: 166 LGRVDVLAAVPPYVPEGELAHMPREARDHEPRAALLGGPDGLAVVRRLLRDAPPYLAAGG 225 Query: 222 LCSVEIGYNQ 231 +E+ +Q Sbjct: 226 ELLLEMHRDQ 235 >gi|332346417|gb|AEE59751.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli UMNK88] Length = 343 Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 37/122 (30%), Positives = 60/122 (49%), Gaps = 23/122 (18%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LD+G G G + +A + SP + D+S A+E +++ NGV + S+ FS Sbjct: 199 KVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVEG--EVFASNVFS 256 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 V+G FD+I+SNPP+ + + + SLD +T+ G RHLN Sbjct: 257 EVKGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 295 Query: 220 DG 221 G Sbjct: 296 GG 297 >gi|301330281|ref|ZP_07222935.1| methyltransferase small domain protein [Escherichia coli MS 78-1] gi|300843740|gb|EFK71500.1| methyltransferase small domain protein [Escherichia coli MS 78-1] Length = 343 Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 37/122 (30%), Positives = 60/122 (49%), Gaps = 23/122 (18%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LD+G G G + +A + SP + D+S A+E +++ NGV + S+ FS Sbjct: 199 KVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVEG--EVFASNVFS 256 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 V+G FD+I+SNPP+ + + + SLD +T+ G RHLN Sbjct: 257 EVKGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 295 Query: 220 DG 221 G Sbjct: 296 GG 297 >gi|300939355|ref|ZP_07154023.1| methyltransferase small domain protein [Escherichia coli MS 21-1] gi|300455759|gb|EFK19252.1| methyltransferase small domain protein [Escherichia coli MS 21-1] Length = 343 Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 37/122 (30%), Positives = 60/122 (49%), Gaps = 23/122 (18%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LD+G G G + +A + SP + D+S A+E +++ NGV + S+ FS Sbjct: 199 KVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVEG--EVFASNVFS 256 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 V+G FD+I+SNPP+ + + + SLD +T+ G RHLN Sbjct: 257 EVKGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 295 Query: 220 DG 221 G Sbjct: 296 GG 297 >gi|191167391|ref|ZP_03029206.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli B7A] gi|256025289|ref|ZP_05439154.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia sp. 4_1_40B] gi|190902531|gb|EDV62265.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli B7A] Length = 343 Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 37/122 (30%), Positives = 60/122 (49%), Gaps = 23/122 (18%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LD+G G G + +A + SP + D+S A+E +++ NGV + S+ FS Sbjct: 199 KVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVEG--EVFASNVFS 256 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 V+G FD+I+SNPP+ + + + SLD +T+ G RHLN Sbjct: 257 EVKGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 295 Query: 220 DG 221 G Sbjct: 296 GG 297 >gi|304315450|ref|YP_003850597.1| methyltransferase [Methanothermobacter marburgensis str. Marburg] gi|302588909|gb|ADL59284.1| predicted methyltransferase [Methanothermobacter marburgensis str. Marburg] Length = 228 Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 53/164 (32%), Positives = 79/164 (48%), Gaps = 21/164 (12%) Query: 60 FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119 + ++++ D +EP +T LL D+ +E + R+L++GTGTG V + K S Sbjct: 4 YGDLKIETCRDVYEPAEDTFLLADN--------LEVGEGERVLEIGTGTGLVAI---KAS 52 Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESV 178 DI+ A+E A+ NAV NG R LQ D F V G FDVI+ N PY+ Sbjct: 53 EKADVTATDINPAAVECARKNAVLNGSGLR--VLQGDLFDPVRGEKFDVILFNTPYLP-- 108 Query: 179 IVDCLGLE-VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221 +G E + + ++ +GG DG D V+ HL G Sbjct: 109 ----VGEEDITEGSIDLAWNGGPDGRRVIDRFLDDVAEHLKPGG 148 >gi|283835035|ref|ZP_06354776.1| ribosomal RNA small subunit methyltransferase C (rRNA(guanine-N(2)-)-methyltransferase) [Citrobacter youngae ATCC 29220] gi|291069324|gb|EFE07433.1| ribosomal RNA small subunit methyltransferase C (rRNA(guanine-N(2)-)-methyltransferase) [Citrobacter youngae ATCC 29220] Length = 343 Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 40/122 (32%), Positives = 61/122 (50%), Gaps = 23/122 (18%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LD+G G G + +AL SP + D+S A+E +++ NGV + + S+ FS Sbjct: 199 KVLDVGCGAGVLSVALASHSPKVRLTLCDVSAAAVEASRATLAANGVEG--NVIASNVFS 256 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 V G FD+I+SNPP+ + GL+ SLD +T+ G RHLN Sbjct: 257 DVTGRFDMIISNPPFHD-------GLQT-------SLDAA-------QTLIRGAVRHLNS 295 Query: 220 DG 221 G Sbjct: 296 GG 297 >gi|229589292|ref|YP_002871411.1| putative methyltransferase [Pseudomonas fluorescens SBW25] gi|229361158|emb|CAY48021.1| putative methyltransferase [Pseudomonas fluorescens SBW25] Length = 286 Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 63/258 (24%), Positives = 101/258 (39%), Gaps = 35/258 (13%) Query: 23 IVDPDSVLD----------DRQRFF--LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70 + DPD+ LD D+QR A+ + I+G F + L + S Sbjct: 23 VWDPDNDLDSLVDRFIVRADKQRALDEFRLAVSERCNRIPLGHIVGTVAFDELSLVVGSG 82 Query: 71 TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130 F PRP + + + L E +LDL G+GA+ LA+ + P +D++ Sbjct: 83 VFIPRPHS-----TVIHKWLDETELATGTCVLDLCAGSGAIGLAIARRRP-----DLDVT 132 Query: 131 CKALEIAKSNAVTNGVSE-----------RFDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179 C E N + ++ + D + F+ +IV+NPPY+ Sbjct: 133 CVEREDVAVNYLKRNIARLATKNVQVSAAQADVYDTKAFARFRQQVGLIVANPPYVPQKA 192 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 L E D P+ ++ G DGL R I + L DG +E G +Q V +F Sbjct: 193 Q--LQPEWGDHHPKAAVYSGTDGLDLTRQIITLATTLLTPDGWLVIEHGEDQASAVRELF 250 Query: 240 ESRKLFLVNAFKDYGGND 257 E +L + D +D Sbjct: 251 EQHQLTEIRTVIDRQASD 268 >gi|218698207|ref|YP_002405874.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli 55989] gi|237704107|ref|ZP_04534588.1| ribosomal RNA small subunit methyltransferase C [Escherichia sp. 3_2_53FAA] gi|260847187|ref|YP_003224965.1| 16S rRNA m2G1207 methylase RsmC [Escherichia coli O103:H2 str. 12009] gi|300905357|ref|ZP_07123127.1| methyltransferase small domain protein [Escherichia coli MS 84-1] gi|301303471|ref|ZP_07209594.1| methyltransferase small domain protein [Escherichia coli MS 124-1] gi|226712939|sp|B7LEL6|RSMC_ECO55 RecName: Full=Ribosomal RNA small subunit methyltransferase C; AltName: Full=16S rRNA m2G1207 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rsmC gi|218354939|emb|CAV02161.1| 16S RNA m2G1207 methylase [Escherichia coli 55989] gi|226902019|gb|EEH88278.1| ribosomal RNA small subunit methyltransferase C [Escherichia sp. 3_2_53FAA] gi|257762334|dbj|BAI33831.1| 16S rRNA m2G1207 methylase RsmC [Escherichia coli O103:H2 str. 12009] gi|281181513|dbj|BAI57843.1| ribosomal RNA small subunit methyltransferase [Escherichia coli SE15] gi|300402766|gb|EFJ86304.1| methyltransferase small domain protein [Escherichia coli MS 84-1] gi|300841198|gb|EFK68958.1| methyltransferase small domain protein [Escherichia coli MS 124-1] gi|315255771|gb|EFU35739.1| methyltransferase small domain protein [Escherichia coli MS 85-1] gi|315284963|gb|EFU44408.1| methyltransferase small domain protein [Escherichia coli MS 110-3] gi|323163257|gb|EFZ49088.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli E128010] gi|323955326|gb|EGB51098.1| methyltransferase small domain-containing protein [Escherichia coli H263] Length = 343 Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 37/122 (30%), Positives = 60/122 (49%), Gaps = 23/122 (18%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LD+G G G + +A + SP + D+S A+E +++ NGV + S+ FS Sbjct: 199 KVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVEG--EVFASNVFS 256 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 V+G FD+I+SNPP+ + + + SLD +T+ G RHLN Sbjct: 257 EVKGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 295 Query: 220 DG 221 G Sbjct: 296 GG 297 >gi|315616262|gb|EFU96881.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli 3431] Length = 343 Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 37/122 (30%), Positives = 60/122 (49%), Gaps = 23/122 (18%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LD+G G G + +A + SP + D+S A+E +++ NGV + S+ FS Sbjct: 199 KVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVEG--EVFASNVFS 256 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 V+G FD+I+SNPP+ + + + SLD +T+ G RHLN Sbjct: 257 EVKGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 295 Query: 220 DG 221 G Sbjct: 296 GG 297 >gi|218708048|ref|YP_002415567.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli UMN026] gi|293403039|ref|ZP_06647136.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli FVEC1412] gi|298378566|ref|ZP_06988450.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli FVEC1302] gi|300899328|ref|ZP_07117593.1| methyltransferase small domain protein [Escherichia coli MS 198-1] gi|301027007|ref|ZP_07190391.1| methyltransferase small domain protein [Escherichia coli MS 69-1] gi|226712948|sp|B7NH38|RSMC_ECOLU RecName: Full=Ribosomal RNA small subunit methyltransferase C; AltName: Full=16S rRNA m2G1207 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rsmC gi|218435145|emb|CAR16103.1| 16S RNA m2G1207 methylase [Escherichia coli UMN026] gi|291429954|gb|EFF02968.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli FVEC1412] gi|298280900|gb|EFI22401.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli FVEC1302] gi|300357063|gb|EFJ72933.1| methyltransferase small domain protein [Escherichia coli MS 198-1] gi|300395231|gb|EFJ78769.1| methyltransferase small domain protein [Escherichia coli MS 69-1] Length = 343 Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 37/122 (30%), Positives = 60/122 (49%), Gaps = 23/122 (18%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LD+G G G + +A + SP + D+S A+E +++ NGV + S+ FS Sbjct: 199 KVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVEG--EVFASNVFS 256 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 V+G FD+I+SNPP+ + + + SLD +T+ G RHLN Sbjct: 257 EVKGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 295 Query: 220 DG 221 G Sbjct: 296 GG 297 >gi|16132189|ref|NP_418788.1| 16S rRNA m(2)G1207 methyltransferase [Escherichia coli str. K-12 substr. MG1655] gi|82779621|ref|YP_405970.1| 16S ribosomal RNA m2G1207 methyltransferase [Shigella dysenteriae Sd197] gi|89111078|ref|AP_004858.1| 16S RNA m2G1207 methylase [Escherichia coli str. K-12 substr. W3110] gi|170083756|ref|YP_001733076.1| 16S RNA m2G1207 methylase [Escherichia coli str. K-12 substr. DH10B] gi|218561546|ref|YP_002394459.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli S88] gi|238903457|ref|YP_002929253.1| 16S rRNA m2G1207 methylase [Escherichia coli BW2952] gi|253775000|ref|YP_003037831.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254164296|ref|YP_003047406.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli B str. REL606] gi|293417843|ref|ZP_06660465.1| rsmC [Escherichia coli B185] gi|309787410|ref|ZP_07682022.1| ribosomal RNA small subunit methyltransferase C [Shigella dysenteriae 1617] gi|312970060|ref|ZP_07784242.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli 1827-70] gi|732118|sp|P39406|RSMC_ECOLI RecName: Full=Ribosomal RNA small subunit methyltransferase C; AltName: Full=16S rRNA m2G1207 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rsmC gi|123560843|sp|Q327M6|RSMC_SHIDS RecName: Full=Ribosomal RNA small subunit methyltransferase C; AltName: Full=16S rRNA m2G1207 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rsmC gi|226712938|sp|B7MNC1|RSMC_ECO45 RecName: Full=Ribosomal RNA small subunit methyltransferase C; AltName: Full=16S rRNA m2G1207 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rsmC gi|226712944|sp|B1XFI0|RSMC_ECODH RecName: Full=Ribosomal RNA small subunit methyltransferase C; AltName: Full=16S rRNA m2G1207 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rsmC gi|537211|gb|AAA97267.1| ORF_f343b [Escherichia coli str. K-12 substr. MG1655] gi|1790830|gb|AAC77324.1| 16S rRNA m(2)G1207 methyltransferase [Escherichia coli str. K-12 substr. MG1655] gi|81243769|gb|ABB64479.1| putative enzyme [Shigella dysenteriae Sd197] gi|85677109|dbj|BAE78359.1| 16S RNA m2G1207 methylase [Escherichia coli str. K12 substr. W3110] gi|169891591|gb|ACB05298.1| 16S RNA m2G1207 methylase [Escherichia coli str. K-12 substr. DH10B] gi|218368315|emb|CAR06134.1| 16S RNA m2G1207 methylase [Escherichia coli S88] gi|238859733|gb|ACR61731.1| 16S rRNA m2G1207 methylase [Escherichia coli BW2952] gi|242379893|emb|CAQ34729.1| 16S rRNA m[2]G1207 methyltransferase [Escherichia coli BL21(DE3)] gi|253326044|gb|ACT30646.1| rRNA (guanine-N(2)-)-methyltransferase [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253976199|gb|ACT41870.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli B str. REL606] gi|253980356|gb|ACT46026.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli BL21(DE3)] gi|260450819|gb|ACX41241.1| rRNA (guanine-N(2)-)-methyltransferase [Escherichia coli DH1] gi|291430561|gb|EFF03559.1| rsmC [Escherichia coli B185] gi|308924988|gb|EFP70483.1| ribosomal RNA small subunit methyltransferase C [Shigella dysenteriae 1617] gi|310337558|gb|EFQ02669.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli 1827-70] gi|315138923|dbj|BAJ46082.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli DH1] gi|323171382|gb|EFZ57029.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli LT-68] Length = 343 Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 37/122 (30%), Positives = 60/122 (49%), Gaps = 23/122 (18%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LD+G G G + +A + SP + D+S A+E +++ NGV + S+ FS Sbjct: 199 KVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVEG--EVFASNVFS 256 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 V+G FD+I+SNPP+ + + + SLD +T+ G RHLN Sbjct: 257 EVKGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 295 Query: 220 DG 221 G Sbjct: 296 GG 297 >gi|331681354|ref|ZP_08381991.1| ribosomal RNA small subunit methyltransferase C (rRNA(guanine-N(2)-)-methyltransferase) (16S rRNA m2G1207methyltransferase) [Escherichia coli H299] gi|331081575|gb|EGI52736.1| ribosomal RNA small subunit methyltransferase C (rRNA(guanine-N(2)-)-methyltransferase) (16S rRNA m2G1207methyltransferase) [Escherichia coli H299] Length = 343 Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 37/122 (30%), Positives = 60/122 (49%), Gaps = 23/122 (18%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LD+G G G + +A + SP + D+S A+E +++ NGV + S+ FS Sbjct: 199 KVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVEG--EVFASNVFS 256 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 V+G FD+I+SNPP+ + + + SLD +T+ G RHLN Sbjct: 257 EVKGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 295 Query: 220 DG 221 G Sbjct: 296 GG 297 >gi|156551603|ref|XP_001602665.1| PREDICTED: similar to ENSANGP00000004037 [Nasonia vitripennis] Length = 215 Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 61/203 (30%), Positives = 103/203 (50%), Gaps = 19/203 (9%) Query: 72 FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL---LKESPFFKGVGVD 128 +EP ++ L++D AL L + E L++G G+G V AL L++ F +G+D Sbjct: 17 YEPSEDSFLVID-ALEMDLQQFESSKPAMCLEIGIGSGVVITALAMALQKYCFSYFLGID 75 Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVDCLGLE 186 I+ +A ++ + N V +T+Q D SS+ + +FD+I+ NPPY+ + LE Sbjct: 76 INPQACKVTRKTCAINKVD--IETVQMDLLSSMCRKNIFDIIIFNPPYVVTE-----PLE 128 Query: 187 VRDFDPRIS--LDGGIDGLSHYRTIADGVSRHLNKDGLCS-VEIGYNQKVDVVRIFESRK 243 V D D IS GG G + + + L+++GL + I N+ D++++FES Sbjct: 129 VLD-DRFISKTWAGGHKGRQVMDRLFPLIPQLLSENGLFYLLVIKENEPHDIIQLFESLN 187 Query: 244 L--FLVNAFKDYGGNDRVLLFCR 264 + +V K G + VL F R Sbjct: 188 MTGTIVAERKIRGEHLHVLRFKR 210 >gi|333011350|gb|EGK30764.1| ribosomal RNA small subunit methyltransferase C [Shigella flexneri K-272] gi|333012245|gb|EGK31627.1| ribosomal RNA small subunit methyltransferase C [Shigella flexneri K-227] Length = 343 Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 37/122 (30%), Positives = 60/122 (49%), Gaps = 23/122 (18%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LD+G G G + +A + SP + D+S A+E +++ NGV + S+ FS Sbjct: 199 KVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVEG--EVFASNVFS 256 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 V+G FD+I+SNPP+ + + + SLD +T+ G RHLN Sbjct: 257 EVKGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 295 Query: 220 DG 221 G Sbjct: 296 GG 297 >gi|315638261|ref|ZP_07893442.1| protein-(glutamine-N5) methyltransferase [Campylobacter upsaliensis JV21] gi|315481608|gb|EFU72231.1| protein-(glutamine-N5) methyltransferase [Campylobacter upsaliensis JV21] Length = 265 Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 71/258 (27%), Positives = 118/258 (45%), Gaps = 22/258 (8%) Query: 11 LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKH-ESIHRILGWRDFYNVRLTLSS 69 LC + + ++ + D+R+ F ++R K E + DFY + + Sbjct: 25 LCELLQKDRTWLFLNENLEFDEREYF----ELIRRFKEGEPYEYLFKKADFYGLEFHIEK 80 Query: 70 DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129 PR ++E+L++ L + K + L++G G+G + + L K K DI Sbjct: 81 GVLIPRYDSEILLEKLLELT----HKEKLQNALEIGFGSGILSIILAKNLKL-KIKACDI 135 Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVIVDCLGLE 186 + KAL+IA NA + V D + SD F +E G FD+I SNPPYI++ L Sbjct: 136 NEKALKIALKNAKKHEVL--IDFVLSD-FEKLELRKGEFDLIFSNPPYIKNSY--PLDKW 190 Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246 V++ +P+ +L GG G I + + + + E GY+QK + +I ++ F Sbjct: 191 VQN-EPKNALLGGEKGYEILEKII--IFAYQKEAKFLACEFGYDQKEILSQILDTYN-FK 246 Query: 247 VNAFKDYGGNDRVLLFCR 264 FKD G DR + R Sbjct: 247 AEFFKDENGFDRAFVAKR 264 >gi|331666038|ref|ZP_08366932.1| ribosomal RNA small subunit methyltransferase C (rRNA(guanine-N(2)-)-methyltransferase) (16S rRNA m2G1207methyltransferase) [Escherichia coli TA143] gi|331057089|gb|EGI29083.1| ribosomal RNA small subunit methyltransferase C (rRNA(guanine-N(2)-)-methyltransferase) (16S rRNA m2G1207methyltransferase) [Escherichia coli TA143] Length = 343 Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 37/122 (30%), Positives = 60/122 (49%), Gaps = 23/122 (18%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LD+G G G + +A + SP + D+S A+E +++ NGV + S+ FS Sbjct: 199 KVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVEG--EVFASNVFS 256 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 V+G FD+I+SNPP+ + + + SLD +T+ G RHLN Sbjct: 257 EVKGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 295 Query: 220 DG 221 G Sbjct: 296 GG 297 >gi|304383731|ref|ZP_07366190.1| protein-(glutamine-N5) methyltransferase [Prevotella marshii DSM 16973] gi|304335255|gb|EFM01526.1| protein-(glutamine-N5) methyltransferase [Prevotella marshii DSM 16973] Length = 280 Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 50/168 (29%), Positives = 76/168 (45%), Gaps = 24/168 (14%) Query: 13 RVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTF 72 +VT LS+H V L ++R + E + +LG FY T+S Sbjct: 42 KVTQLSAHAVAE-------------LRKIMMRLEQAEPVQYVLGKACFYGRSFTVSQGVL 88 Query: 73 EPRPETE----LLVDSALA-FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 PRPETE ++++ L+ FS P +LD+GTG+G + L P Sbjct: 89 IPRPETEDLCTWVIETVLSSFSCPE------PCLLDIGTGSGCIAATLALNIPHAHVSAW 142 Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYI 175 DIS +AL +A++N S + + S +++IVSNPPYI Sbjct: 143 DISPEALVVARANVKALKASVDVAEVDALNLPSDSDRWEIIVSNPPYI 190 >gi|170021670|ref|YP_001726624.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli ATCC 8739] gi|188494749|ref|ZP_03002019.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli 53638] gi|291285749|ref|YP_003502567.1| 16S RNA G1207 methylase RsmC [Escherichia coli O55:H7 str. CB9615] gi|300918454|ref|ZP_07135051.1| methyltransferase small domain protein [Escherichia coli MS 115-1] gi|300932046|ref|ZP_07147341.1| methyltransferase small domain protein [Escherichia coli MS 187-1] gi|300946754|ref|ZP_07161002.1| methyltransferase small domain protein [Escherichia coli MS 116-1] gi|300959114|ref|ZP_07171200.1| methyltransferase small domain protein [Escherichia coli MS 175-1] gi|301646887|ref|ZP_07246733.1| methyltransferase small domain protein [Escherichia coli MS 146-1] gi|307136569|ref|ZP_07495925.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli H736] gi|312966083|ref|ZP_07780309.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli 2362-75] gi|331640412|ref|ZP_08341560.1| ribosomal RNA small subunit methyltransferase C (rRNA(guanine-N(2)-)-methyltransferase) (16S rRNA m2G1207methyltransferase) [Escherichia coli H736] gi|226712947|sp|B1IS49|RSMC_ECOLC RecName: Full=Ribosomal RNA small subunit methyltransferase C; AltName: Full=16S rRNA m2G1207 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rsmC gi|169756598|gb|ACA79297.1| rRNA (guanine-N(2)-)-methyltransferase [Escherichia coli ATCC 8739] gi|188489948|gb|EDU65051.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli 53638] gi|209748988|gb|ACI72801.1| ribosomal RNA small subunit methyltransferase [Escherichia coli] gi|209748994|gb|ACI72804.1| ribosomal RNA small subunit methyltransferase [Escherichia coli] gi|284924549|emb|CBG37688.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli 042] gi|290765622|gb|ADD59583.1| 16S RNA G1207 methylase RsmC [Escherichia coli O55:H7 str. CB9615] gi|300314262|gb|EFJ64046.1| methyltransferase small domain protein [Escherichia coli MS 175-1] gi|300414377|gb|EFJ97687.1| methyltransferase small domain protein [Escherichia coli MS 115-1] gi|300453578|gb|EFK17198.1| methyltransferase small domain protein [Escherichia coli MS 116-1] gi|300460191|gb|EFK23684.1| methyltransferase small domain protein [Escherichia coli MS 187-1] gi|301074940|gb|EFK89746.1| methyltransferase small domain protein [Escherichia coli MS 146-1] gi|312289326|gb|EFR17220.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli 2362-75] gi|320644112|gb|EFX13187.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli O157:H- str. 493-89] gi|320649429|gb|EFX17965.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli O157:H- str. H 2687] gi|320654830|gb|EFX22799.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320660682|gb|EFX28143.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli O55:H7 str. USDA 5905] gi|320665519|gb|EFX32569.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli O157:H7 str. LSU-61] gi|323960144|gb|EGB55788.1| methyltransferase small domain-containing protein [Escherichia coli H489] gi|323965372|gb|EGB60828.1| methyltransferase small domain-containing protein [Escherichia coli M863] gi|327250301|gb|EGE62020.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli STEC_7v] gi|331040158|gb|EGI12365.1| ribosomal RNA small subunit methyltransferase C (rRNA(guanine-N(2)-)-methyltransferase) (16S rRNA m2G1207methyltransferase) [Escherichia coli H736] Length = 343 Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 37/122 (30%), Positives = 60/122 (49%), Gaps = 23/122 (18%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LD+G G G + +A + SP + D+S A+E +++ NGV + S+ FS Sbjct: 199 KVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVEG--EVFASNVFS 256 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 V+G FD+I+SNPP+ + + + SLD +T+ G RHLN Sbjct: 257 EVKGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 295 Query: 220 DG 221 G Sbjct: 296 GG 297 >gi|332083363|gb|EGI88594.1| ribosomal RNA small subunit methyltransferase C [Shigella boydii 5216-82] Length = 343 Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 37/122 (30%), Positives = 60/122 (49%), Gaps = 23/122 (18%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LD+G G G + +A + SP + D+S A+E +++ NGV + S+ FS Sbjct: 199 KVLDIGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVEG--EIFASNVFS 256 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 V+G FD+I+SNPP+ + + + SLD +T+ G RHLN Sbjct: 257 EVKGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 295 Query: 220 DG 221 G Sbjct: 296 GG 297 >gi|298675524|ref|YP_003727274.1| methylase [Methanohalobium evestigatum Z-7303] gi|298288512|gb|ADI74478.1| methylase [Methanohalobium evestigatum Z-7303] Length = 200 Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 49/159 (30%), Positives = 76/159 (47%), Gaps = 18/159 (11%) Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 R+ + +EP +T LL DSA + +D + IL++GTGTG V A+LK + Sbjct: 9 TRVQFVDNVYEPAEDTFLLTDSAFNYI------KDGMNILEIGTGTGFVS-AVLKNNFEV 61 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182 V +I+ A + A+SN V + FD L+ FD+I+ NPPY+ + + Sbjct: 62 NIVSTEINPDAAQCARSNDVEVIRTNMFDGLKPIQ------CFDLILFNPPYLPTSDDEK 115 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221 + + + DGG+DG R D V +L DG Sbjct: 116 VPGWMN-----YAYDGGVDGCDAIRNFLDNVCNYLKPDG 149 >gi|15804942|ref|NP_290984.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli O157:H7 EDL933] gi|15834583|ref|NP_313356.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli O157:H7 str. Sakai] gi|168750994|ref|ZP_02776016.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli O157:H7 str. EC4113] gi|168766650|ref|ZP_02791657.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli O157:H7 str. EC4486] gi|168776653|ref|ZP_02801660.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli O157:H7 str. EC4196] gi|168781658|ref|ZP_02806665.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli O157:H7 str. EC4076] gi|168785012|ref|ZP_02810019.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli O157:H7 str. EC869] gi|168797941|ref|ZP_02822948.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli O157:H7 str. EC508] gi|195937642|ref|ZP_03083024.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli O157:H7 str. EC4024] gi|208806907|ref|ZP_03249244.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli O157:H7 str. EC4206] gi|208814485|ref|ZP_03255814.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli O157:H7 str. EC4045] gi|208819277|ref|ZP_03259597.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli O157:H7 str. EC4042] gi|209398157|ref|YP_002273891.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli O157:H7 str. EC4115] gi|217326219|ref|ZP_03442303.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli O157:H7 str. TW14588] gi|254796366|ref|YP_003081203.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli O157:H7 str. TW14359] gi|261226727|ref|ZP_05941008.1| 16S rRNA m2G1207 methylase [Escherichia coli O157:H7 str. FRIK2000] gi|261256889|ref|ZP_05949422.1| 16S rRNA m2G1207 methylase [Escherichia coli O157:H7 str. FRIK966] gi|81764381|sp|Q8X510|RSMC_ECO57 RecName: Full=Ribosomal RNA small subunit methyltransferase C; AltName: Full=16S rRNA m2G1207 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rsmC gi|226712940|sp|B5Z4Q2|RSMC_ECO5E RecName: Full=Ribosomal RNA small subunit methyltransferase C; AltName: Full=16S rRNA m2G1207 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rsmC gi|12519394|gb|AAG59551.1|AE005668_6 putative enzyme [Escherichia coli O157:H7 str. EDL933] gi|13364807|dbj|BAB38752.1| ribosomal RNA small subunit methyltransferase [Escherichia coli O157:H7 str. Sakai] gi|187768028|gb|EDU31872.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli O157:H7 str. EC4196] gi|188014927|gb|EDU53049.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli O157:H7 str. EC4113] gi|189000759|gb|EDU69745.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli O157:H7 str. EC4076] gi|189364171|gb|EDU82590.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli O157:H7 str. EC4486] gi|189375045|gb|EDU93461.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli O157:H7 str. EC869] gi|189379587|gb|EDU98003.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli O157:H7 str. EC508] gi|208726708|gb|EDZ76309.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli O157:H7 str. EC4206] gi|208735762|gb|EDZ84449.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli O157:H7 str. EC4045] gi|208739400|gb|EDZ87082.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli O157:H7 str. EC4042] gi|209159557|gb|ACI36990.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli O157:H7 str. EC4115] gi|209748990|gb|ACI72802.1| ribosomal RNA small subunit methyltransferase [Escherichia coli] gi|209748992|gb|ACI72803.1| ribosomal RNA small subunit methyltransferase [Escherichia coli] gi|209748996|gb|ACI72805.1| ribosomal RNA small subunit methyltransferase [Escherichia coli] gi|217322440|gb|EEC30864.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli O157:H7 str. TW14588] gi|254595766|gb|ACT75127.1| 16S rRNA m2G1207 methylase [Escherichia coli O157:H7 str. TW14359] gi|320190514|gb|EFW65164.1| Ribosomal RNA small subunit methyltransferase C [Escherichia coli O157:H7 str. EC1212] gi|320638709|gb|EFX08370.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli O157:H7 str. G5101] gi|326345317|gb|EGD69060.1| Ribosomal RNA small subunit methyltransferase C [Escherichia coli O157:H7 str. 1125] gi|326346829|gb|EGD70563.1| Ribosomal RNA small subunit methyltransferase C [Escherichia coli O157:H7 str. 1044] Length = 343 Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 37/122 (30%), Positives = 60/122 (49%), Gaps = 23/122 (18%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LD+G G G + +A + SP + D+S A+E +++ NGV + S+ FS Sbjct: 199 KVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVEG--EVFASNVFS 256 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 V+G FD+I+SNPP+ + + + SLD +T+ G RHLN Sbjct: 257 EVKGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 295 Query: 220 DG 221 G Sbjct: 296 GG 297 >gi|301022273|ref|ZP_07186171.1| methyltransferase small domain protein [Escherichia coli MS 196-1] gi|299881323|gb|EFI89534.1| methyltransferase small domain protein [Escherichia coli MS 196-1] Length = 343 Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 37/122 (30%), Positives = 60/122 (49%), Gaps = 23/122 (18%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LD+G G G + +A + SP + D+S A+E +++ NGV + S+ FS Sbjct: 199 KVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVEG--EVFASNVFS 256 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 V+G FD+I+SNPP+ + + + SLD +T+ G RHLN Sbjct: 257 EVKGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 295 Query: 220 DG 221 G Sbjct: 296 GG 297 >gi|326382083|ref|ZP_08203776.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Gordonia neofelifaecis NRRL B-59395] gi|326199509|gb|EGD56690.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Gordonia neofelifaecis NRRL B-59395] Length = 310 Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 48/182 (26%), Positives = 94/182 (51%), Gaps = 10/182 (5%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A ++ + +V G+ ++++ D DR R + +A+ R ++ + I F Sbjct: 28 AAAEAGELVAQVLGVEPGRLLLIDDVSDADRSR--IDDAVSRRVQRVPLQHITSRAHFAG 85 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV--VRILDLGTGTGAVCLALLKESP 120 V LT+ F PRPETEL+V+ A+A + + + + +R++DL +G+GA+ +A+ +P Sbjct: 86 VELTVGPGVFVPRPETELIVEWAVA-EIAELRRTGIAPIRVVDLCSGSGALAVAIAAHAP 144 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD-----WFSSVEGLFDVIVSNPPYI 175 + V+++ A E + N G++ R +++D S + V+VSNPPY+ Sbjct: 145 DVQVTAVELAETASEYLRRNVHDLGLAGRVSVVRADVTDATAMSPILTGAHVVVSNPPYV 204 Query: 176 ES 177 + Sbjct: 205 PA 206 >gi|298735926|ref|YP_003728451.1| protoporphyrinogen oxidase [Helicobacter pylori B8] gi|298355115|emb|CBI65987.1| protoporphyrinogen oxidase [Helicobacter pylori B8] Length = 276 Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 61/237 (25%), Positives = 100/237 (42%), Gaps = 27/237 (11%) Query: 30 LDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFS 89 L ++ + + L I +L DFY ++ PRPETE+LV AL Sbjct: 48 LTHKEEMCFFELVEKRLNDCPIEYLLESCDFYGRSFFVNEHVLIPRPETEILVQKALDI- 106 Query: 90 LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 I + + I ++G G+G V ++L E+P DIS ALE+A N + ER Sbjct: 107 ---ISQYHLKEIGEIGIGSGCVSVSLALENPNLSIHASDISPNALEVALKNIERFNLKER 163 Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDF--------DPRISLDGGID 201 ++ + + + +++VSNPPYI R++ +P +L GG+ Sbjct: 164 VFLKKTRLWDRMPTI-EMLVSNPPYI-----------ARNYPLEKSVLKEPHEALFGGVK 211 Query: 202 GLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258 G + I ++ K E+GY+Q + E + +KD G DR Sbjct: 212 GDEILKEIIFLAAKL--KIPFLVCEMGYDQLKSLKECLEFCG-YDAEFYKDLSGFDR 265 >gi|255691883|ref|ZP_05415558.1| SmtA protein [Bacteroides finegoldii DSM 17565] gi|260622436|gb|EEX45307.1| SmtA protein [Bacteroides finegoldii DSM 17565] Length = 236 Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 36/79 (45%), Positives = 49/79 (62%), Gaps = 6/79 (7%) Query: 100 RILDLGTGTGAVCLALLKESPF-FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD-- 156 R+LD+GTGTG V L L + SP K V +++ A+E AK N + E+ + +Q+D Sbjct: 40 RVLDVGTGTGLVALMLAQRSPADVKIVALEVDTAAVEQAKENVARSFWKEQIEVVQADFN 99 Query: 157 -WFSSVEGLFDVIVSNPPY 174 + SS G FDVIVSNPPY Sbjct: 100 QYHSS--GKFDVIVSNPPY 116 >gi|320331548|gb|EFW87488.1| HemK family modification methylase [Pseudomonas syringae pv. glycinea str. race 4] gi|330882032|gb|EGH16181.1| HemK family modification methylase [Pseudomonas syringae pv. glycinea str. race 4] Length = 314 Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 32/79 (40%), Positives = 46/79 (58%), Gaps = 1/79 (1%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 + R +D+G GTGA L + P + VDI+ KAL A++NA G+ E SD Sbjct: 135 ISRAVDIGCGTGAGALLIAVARPQAQVYAVDINPKALHFAQTNARVAGL-ENMQCCHSDI 193 Query: 158 FSSVEGLFDVIVSNPPYIE 176 S + G FD+IV+NPPY++ Sbjct: 194 LSGLTGNFDLIVANPPYMK 212 >gi|320321800|gb|EFW77898.1| HemK family modification methylase [Pseudomonas syringae pv. glycinea str. B076] Length = 314 Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 32/79 (40%), Positives = 46/79 (58%), Gaps = 1/79 (1%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 + R +D+G GTGA L + P + VDI+ KAL A++NA G+ E SD Sbjct: 135 ISRAVDIGCGTGAGALLIAVARPQAQVYAVDINPKALHFAQTNARVAGL-ENMQCCHSDI 193 Query: 158 FSSVEGLFDVIVSNPPYIE 176 S + G FD+IV+NPPY++ Sbjct: 194 LSGLTGNFDLIVANPPYMK 212 >gi|293408055|ref|ZP_06651895.1| rsmC [Escherichia coli B354] gi|291472306|gb|EFF14788.1| rsmC [Escherichia coli B354] Length = 343 Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 37/122 (30%), Positives = 60/122 (49%), Gaps = 23/122 (18%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LD+G G G + +A + SP + D+S A+E +++ NGV + S+ FS Sbjct: 199 KVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVEG--EVFASNVFS 256 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 V+G FD+I+SNPP+ + + + SLD +T+ G RHLN Sbjct: 257 EVKGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 295 Query: 220 DG 221 G Sbjct: 296 GG 297 >gi|294658921|ref|XP_461263.2| DEHA2F21010p [Debaryomyces hansenii CBS767] gi|202953487|emb|CAG89652.2| DEHA2F21010p [Debaryomyces hansenii] Length = 311 Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 73/289 (25%), Positives = 125/289 (43%), Gaps = 36/289 (12%) Query: 2 QALRDSHSF--LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRD 59 QALRDS L R + Q ++ + ++ + +AI R K E + ILG + Sbjct: 11 QALRDSRLLPPLLRANP-NLEQAKLELKWIKNELPKSQWHDAIRRRSKLEPLQYILGSQP 69 Query: 60 FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD-VVRILDLGTGTGAVCLALLKE 118 F + + + PR ETE V A + D ++ILD+ TG+G + L L E Sbjct: 70 FGALDILCRRNVLIPRWETEEWVMRISALVRKYHSQADGQLKILDVCTGSGCIPLLLNYE 129 Query: 119 SPFFKGV-----GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFD------- 166 + + G DIS +A++++ +N E + + + S E +FD Sbjct: 130 LSEVQNIPLKVHGCDISKEAVDLSMTN--LKKYEENYPSSSHNIEFSKEDIFDENLLQNI 187 Query: 167 -------VIVSNPPYI------ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213 ++ SNPPYI V+++ + VR ++P I+L G + Y + V Sbjct: 188 LLDKKLSLVTSNPPYIPIHDFNSPVLINGIEKSVRQYEPSIALVGENE---FYEALVRNV 244 Query: 214 SRHLNKDGLCSVEIGYNQKVD-VVRIFESRKLFLVNAFKDYGGNDRVLL 261 N +G E+GY ++V+ V + + + KD GN R ++ Sbjct: 245 ILKSNPEGFV-FEVGYIEQVEFVANMLAQKSYWSCGMMKDSSGNVRCVV 292 >gi|71734702|ref|YP_277258.1| HemK family modification methylase [Pseudomonas syringae pv. phaseolicola 1448A] gi|71555255|gb|AAZ34466.1| modification methylase, HemK family [Pseudomonas syringae pv. phaseolicola 1448A] Length = 314 Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 32/79 (40%), Positives = 46/79 (58%), Gaps = 1/79 (1%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 + R +D+G GTGA L + P + VDI+ KAL A++NA G+ E SD Sbjct: 135 ISRAVDIGCGTGAGALLIAVARPQAQVYAVDINPKALHFAQTNARVAGL-ENMQCCHSDI 193 Query: 158 FSSVEGLFDVIVSNPPYIE 176 S + G FD+IV+NPPY++ Sbjct: 194 LSGLTGNFDLIVANPPYMK 212 >gi|319790287|ref|YP_004151920.1| methyltransferase small [Thermovibrio ammonificans HB-1] gi|317114789|gb|ADU97279.1| methyltransferase small [Thermovibrio ammonificans HB-1] Length = 249 Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 32/81 (39%), Positives = 48/81 (59%), Gaps = 4/81 (4%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+ DLGTG G + + LL + P + VG+D+ + +++A NA N V+ERF + + Sbjct: 44 RLADLGTGCGVIPILLLLKHPKVEAVGIDVLEENVKLALKNAELNKVAERFQAVTLNVTQ 103 Query: 160 SVEGL----FDVIVSNPPYIE 176 E FDV+VSNPP+IE Sbjct: 104 VKEHFRPSSFDVVVSNPPFIE 124 >gi|289648530|ref|ZP_06479873.1| HemK family modification methylase [Pseudomonas syringae pv. aesculi str. 2250] Length = 314 Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 32/79 (40%), Positives = 46/79 (58%), Gaps = 1/79 (1%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 + R +D+G GTGA L + P + VDI+ KAL A++NA G+ E SD Sbjct: 135 ISRAVDIGCGTGAGALLIAVARPQAQVYAVDINPKALHFAQTNARVAGL-ENMQCCHSDI 193 Query: 158 FSSVEGLFDVIVSNPPYIE 176 S + G FD+IV+NPPY++ Sbjct: 194 LSGLTGNFDLIVANPPYMK 212 >gi|331650856|ref|ZP_08351884.1| ribosomal RNA small subunit methyltransferase C (rRNA(guanine-N(2)-)-methyltransferase) (16S rRNA m2G1207methyltransferase) [Escherichia coli M718] gi|331051310|gb|EGI23359.1| ribosomal RNA small subunit methyltransferase C (rRNA(guanine-N(2)-)-methyltransferase) (16S rRNA m2G1207methyltransferase) [Escherichia coli M718] Length = 343 Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 37/122 (30%), Positives = 57/122 (46%), Gaps = 23/122 (18%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LD+G G G + +A + SP + D+S A+E +++ NGV + S+ FS Sbjct: 199 KVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVEG--EVFASNVFS 256 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 V+G FD+I+SNPP+ DG L +T+ G RHLN Sbjct: 257 EVKGRFDMIISNPPF---------------------HDGMQTNLDAAQTLIRGAVRHLNS 295 Query: 220 DG 221 G Sbjct: 296 GG 297 >gi|257485641|ref|ZP_05639682.1| HemK family modification methylase [Pseudomonas syringae pv. tabaci ATCC 11528] gi|331011930|gb|EGH91986.1| HemK family modification methylase [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 314 Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 32/79 (40%), Positives = 46/79 (58%), Gaps = 1/79 (1%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 + R +D+G GTGA L + P + VDI+ KAL A++NA G+ E SD Sbjct: 135 ISRAVDIGCGTGAGALLIAVARPQAQVYAVDINPKALHFAQTNARVAGL-ENMQCCHSDI 193 Query: 158 FSSVEGLFDVIVSNPPYIE 176 S + G FD+IV+NPPY++ Sbjct: 194 LSGLTGNFDLIVANPPYMK 212 >gi|229496584|ref|ZP_04390298.1| SmtA protein [Porphyromonas endodontalis ATCC 35406] gi|229316481|gb|EEN82400.1| SmtA protein [Porphyromonas endodontalis ATCC 35406] Length = 256 Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 30/83 (36%), Positives = 50/83 (60%), Gaps = 2/83 (2%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW- 157 +RILD+G GTG + L L + P + ++I A+E A NA + S R +Q+D+ Sbjct: 54 LRILDVGCGTGLIALMLAQRYPRAEVTALEIEPTAVERATYNAAQSPFSSRVRVVQADFS 113 Query: 158 -FSSVEGLFDVIVSNPPYIESVI 179 + + + L+D+IVSNPPY ++ + Sbjct: 114 TWQAPQALYDLIVSNPPYYKNTL 136 >gi|170681708|ref|YP_001746825.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli SMS-3-5] gi|226712950|sp|B1LEH4|RSMC_ECOSM RecName: Full=Ribosomal RNA small subunit methyltransferase C; AltName: Full=16S rRNA m2G1207 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rsmC gi|170519426|gb|ACB17604.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli SMS-3-5] Length = 343 Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 36/122 (29%), Positives = 60/122 (49%), Gaps = 23/122 (18%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LD+G G G + +A + SP + D+S A+E +++ NG+ + S+ FS Sbjct: 199 KVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGIEG--EVFASNVFS 256 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 V+G FD+I+SNPP+ + + + SLD +T+ G RHLN Sbjct: 257 EVKGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 295 Query: 220 DG 221 G Sbjct: 296 GG 297 >gi|330986980|gb|EGH85083.1| HemK family modification methylase [Pseudomonas syringae pv. lachrymans str. M301315] Length = 314 Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 32/79 (40%), Positives = 46/79 (58%), Gaps = 1/79 (1%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 + R +D+G GTGA L + P + VDI+ KAL A++NA G+ E SD Sbjct: 135 ISRAVDIGCGTGAGALLIAVARPQAQVYAVDINPKALHFAQTNARVAGL-ENMQCCHSDI 193 Query: 158 FSSVEGLFDVIVSNPPYIE 176 S + G FD+IV+NPPY++ Sbjct: 194 LSGLTGNFDLIVANPPYMK 212 >gi|317011269|gb|ADU85016.1| protoporphyrinogen oxidase [Helicobacter pylori SouthAfrica7] Length = 278 Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 55/178 (30%), Positives = 83/178 (46%), Gaps = 24/178 (13%) Query: 32 DRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLP 91 + RFF + + L I +L FY ++ PRPETE+LV AL Sbjct: 52 EEMRFF--ELVEKRLNDYPIEYLLESCSFYGRSFFVNEHVLIPRPETEILVQKALDI--- 106 Query: 92 RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151 I + + I ++G G+ V ++L E+P DIS ALE+A N ERFD Sbjct: 107 -ITQYHLKEIGEIGIGSACVSVSLALENPNLSIHASDISPNALEVASKNI------ERFD 159 Query: 152 TLQSDWFSSVEGLFD------VIVSNPPYI-ESVIVDCLGLEVRDFDPRISLDGGIDG 202 L+ F L+D +++SNPPYI ++ +D L+ +P +L GG+ G Sbjct: 160 -LKKRIFLKQTHLWDHMPTTPMLISNPPYIAKNYPLDKSVLK----EPHKALFGGVKG 212 >gi|217032254|ref|ZP_03437751.1| hypothetical protein HPB128_142g2 [Helicobacter pylori B128] gi|216946020|gb|EEC24633.1| hypothetical protein HPB128_142g2 [Helicobacter pylori B128] Length = 276 Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 61/237 (25%), Positives = 100/237 (42%), Gaps = 27/237 (11%) Query: 30 LDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFS 89 L ++ + + L I +L DFY ++ PRPETE+LV AL Sbjct: 48 LTHKEEMCFFELVEKRLNDCPIEYLLESCDFYGRSFFVNEHVLIPRPETEILVQKALDI- 106 Query: 90 LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 I + + I ++G G+G V ++L E+P DIS ALE+A N + ER Sbjct: 107 ---ISQYHLKEIGEIGIGSGCVSVSLALENPNLSIHASDISPNALEVALKNIERFNLKER 163 Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDF--------DPRISLDGGID 201 ++ + + + +++VSNPPYI R++ +P +L GG+ Sbjct: 164 CFLKKTRLWDRMPTI-EMLVSNPPYI-----------ARNYPLEKSVLKEPHEALFGGVK 211 Query: 202 GLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258 G + I ++ K E+GY+Q + E + +KD G DR Sbjct: 212 GDEILKEIIFLAAKL--KIPFLVCEMGYDQLKSLKECLEFCG-YDAEFYKDLSGFDR 265 >gi|298489513|ref|ZP_07007523.1| predicted methyltransferase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298155969|gb|EFH97079.1| predicted methyltransferase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 314 Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 32/79 (40%), Positives = 46/79 (58%), Gaps = 1/79 (1%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 + R +D+G GTGA L + P + VDI+ KAL A++NA G+ E SD Sbjct: 135 ISRAVDIGCGTGAGALLIAVARPQAQVYAVDINPKALHFAQTNARVAGL-ENMQCCHSDI 193 Query: 158 FSSVEGLFDVIVSNPPYIE 176 S + G FD+IV+NPPY++ Sbjct: 194 LSGLTGNFDLIVANPPYMK 212 >gi|218551620|ref|YP_002385412.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia fergusonii ATCC 35469] gi|226712954|sp|B7LNK6|RSMC_ESCF3 RecName: Full=Ribosomal RNA small subunit methyltransferase C; AltName: Full=16S rRNA m2G1207 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rsmC gi|218359162|emb|CAQ91825.1| 16S RNA m2G1207 methylase [Escherichia fergusonii ATCC 35469] Length = 343 Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 36/122 (29%), Positives = 60/122 (49%), Gaps = 23/122 (18%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LD+G G G + +A + SP + D+S A+E +++ NG+ + S+ FS Sbjct: 199 KVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGIEG--EVFASNVFS 256 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 V+G FD+I+SNPP+ + + + SLD +T+ G RHLN Sbjct: 257 EVKGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 295 Query: 220 DG 221 G Sbjct: 296 GG 297 >gi|325499880|gb|EGC97739.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia fergusonii ECD227] Length = 343 Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 36/122 (29%), Positives = 60/122 (49%), Gaps = 23/122 (18%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LD+G G G + +A + SP + D+S A+E +++ NG+ + S+ FS Sbjct: 199 KVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGIEG--EVFASNVFS 256 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 V+G FD+I+SNPP+ + + + SLD +T+ G RHLN Sbjct: 257 EVKGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 295 Query: 220 DG 221 G Sbjct: 296 GG 297 >gi|324112056|gb|EGC06034.1| methyltransferase small domain-containing protein [Escherichia fergusonii B253] Length = 343 Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 36/122 (29%), Positives = 60/122 (49%), Gaps = 23/122 (18%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LD+G G G + +A + SP + D+S A+E +++ NG+ + S+ FS Sbjct: 199 KVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGIEG--EVFASNVFS 256 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 V+G FD+I+SNPP+ + + + SLD +T+ G RHLN Sbjct: 257 EVKGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 295 Query: 220 DG 221 G Sbjct: 296 GG 297 >gi|312866013|ref|ZP_07726234.1| methyltransferase small domain protein [Streptococcus downei F0415] gi|311098417|gb|EFQ56640.1| methyltransferase small domain protein [Streptococcus downei F0415] Length = 196 Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 34/73 (46%), Positives = 46/73 (63%), Gaps = 3/73 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LDLG G G + ++L K K VDI+ +ALE+A+ NA NGV DT QS+ + Sbjct: 61 LLDLGCGYGPLGISLAKVQNL-KVTMVDINQRALELAQKNAKRNGV--EVDTYQSNIYDQ 117 Query: 161 VEGLFDVIVSNPP 173 V+G FD I+SNPP Sbjct: 118 VKGQFDQIISNPP 130 >gi|331017756|gb|EGH97812.1| hypothetical protein PLA106_17069 [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 319 Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 33/85 (38%), Positives = 46/85 (54%), Gaps = 1/85 (1%) Query: 92 RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151 R + R D+G GTGA L + P + VDI+ KAL A++NAV G+ Sbjct: 134 RSTSHPIKRAADIGCGTGAGALLIAVARPDAQVYAVDINPKALHFAQANAVVAGL-HNMQ 192 Query: 152 TLQSDWFSSVEGLFDVIVSNPPYIE 176 SD S + G FD+IV+NPPY++ Sbjct: 193 CCHSDILSGLTGNFDLIVANPPYMK 217 >gi|261885151|ref|ZP_06009190.1| bifunctional methyltransferase [Campylobacter fetus subsp. venerealis str. Azul-94] Length = 261 Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 59/204 (28%), Positives = 95/204 (46%), Gaps = 21/204 (10%) Query: 59 DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL--- 115 DF + PR ETE+LV + + D + I ++G G+G + ++L Sbjct: 69 DFLDYEFEGRRGVLVPRYETEILVHRVASIAT----HLDNISICEIGIGSGVISISLAQM 124 Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYI 175 LK F DIS A+ A+++ GV + + + + VEG FD+IVSNPPYI Sbjct: 125 LKNCIF---TAADISEDAIRYARNHISRFGV--QIELFNTSFLDGVEGDFDIIVSNPPYI 179 Query: 176 -ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234 + +D + +P +L GG G + I + +++ K +C E+GY+QK Sbjct: 180 AKDYKLDKWVMS----EPSQALFGGEKGDEILKKIVN-LAKDRTKFLVC--EMGYDQKAS 232 Query: 235 VVRIFESRKLFLVNAFKDYGGNDR 258 + E + F +KD G DR Sbjct: 233 LSNELE-KAGFKFEFYKDLAGFDR 255 >gi|254561604|ref|YP_003068699.1| hypothetical protein METDI3191 [Methylobacterium extorquens DM4] gi|254268882|emb|CAX24843.1| conserved hypothetical protein [Methylobacterium extorquens DM4] Length = 341 Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 34/76 (44%), Positives = 47/76 (61%), Gaps = 1/76 (1%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+ D+G G+GA + + K P + V VDI+ AL A+ NA GV + + SD S Sbjct: 161 RVADIGCGSGAAGILVAKRLPEAEVVLVDINPAALRAARINARLAGV-DNVRPVHSDMLS 219 Query: 160 SVEGLFDVIVSNPPYI 175 SVEG FD+IVSNPP++ Sbjct: 220 SVEGSFDLIVSNPPFM 235 >gi|194439306|ref|ZP_03071385.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli 101-1] gi|194421788|gb|EDX37796.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli 101-1] gi|323969515|gb|EGB64807.1| methyltransferase small domain-containing protein [Escherichia coli TA007] Length = 343 Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 37/122 (30%), Positives = 60/122 (49%), Gaps = 23/122 (18%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LD+G G G + +A + SP + D+S A+E +++ NGV + S+ FS Sbjct: 199 KVLDVGCGAGVLSVAFSRHSPKIRLTLCDVSAPAVEASRATLAANGVEG--EVFASNVFS 256 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 V+G FD+I+SNPP+ + + + SLD +T+ G RHLN Sbjct: 257 EVKGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 295 Query: 220 DG 221 G Sbjct: 296 GG 297 >gi|255280358|ref|ZP_05344913.1| putative N-6 adenine-specific DNA methylase [Bryantella formatexigens DSM 14469] gi|255268823|gb|EET62028.1| putative N-6 adenine-specific DNA methylase [Bryantella formatexigens DSM 14469] Length = 245 Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 32/98 (32%), Positives = 57/98 (58%), Gaps = 6/98 (6%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 +D+ L R+ +R+ R+LDLGTGTG + + L ++P G++I ++ ++A+ + Sbjct: 32 MDAVLLSGFVRVRERE--RVLDLGTGTGIIPILLEAKTPGEHFTGLEIQKRSADMARRSV 89 Query: 142 VTNGVSERFDTLQSDWFSSV----EGLFDVIVSNPPYI 175 NG+S+R ++ D +V FDV+ SNPPY+ Sbjct: 90 ELNGLSDRISIVEGDIKEAVSIFGRASFDVVTSNPPYM 127 >gi|160884585|ref|ZP_02065588.1| hypothetical protein BACOVA_02572 [Bacteroides ovatus ATCC 8483] gi|156110324|gb|EDO12069.1| hypothetical protein BACOVA_02572 [Bacteroides ovatus ATCC 8483] Length = 236 Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 59/169 (34%), Positives = 86/169 (50%), Gaps = 17/169 (10%) Query: 100 RILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW- 157 RILD+GTGTG V L L + S P V ++I A+ A+ N + + ER + +Q+D+ Sbjct: 40 RILDIGTGTGLVALMLAQRSLPDANIVALEIDEAAVGQARENVIRSPWKERVEVVQADFR 99 Query: 158 -FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216 + S + FDVIVSNPPY VD L D + + + LS Y + +GVS Sbjct: 100 KYRSSDK-FDVIVSNPPY----FVDSLECP----DRQRTAARHNNSLS-YEDLLEGVSGL 149 Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRKLFLV---NAFKDYGG-NDRVLL 261 L ++G +V I + V +I +KL+ V N GG RVL+ Sbjct: 150 LTENGFFTVVIPADVAERVKKIASIKKLYAVRQLNVITKPGGIPKRVLI 198 >gi|283788394|ref|YP_003368259.1| ribosomal RNA small subunit methyltransferase C [Citrobacter rodentium ICC168] gi|282951848|emb|CBG91558.1| ribosomal RNA small subunit methyltransferase C [Citrobacter rodentium ICC168] Length = 342 Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 39/122 (31%), Positives = 59/122 (48%), Gaps = 23/122 (18%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LD+G G G + +AL SP + D+S A+E +++ NG+ D S+ FS Sbjct: 199 KVLDVGCGAGVLSVALASHSPKVRLTLCDVSAPAVEASRATLAANGIEG--DVFASNVFS 256 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 V G FD+I+SNPP+ + GL+ S D +T+ G RHLN Sbjct: 257 EVTGRFDMIISNPPFHD-------GLQT-------SFDAA-------QTLIRGAVRHLNS 295 Query: 220 DG 221 G Sbjct: 296 GG 297 >gi|57242017|ref|ZP_00369957.1| protoporphyrinogen oxidase (hemK) [Campylobacter upsaliensis RM3195] gi|57017209|gb|EAL53990.1| protoporphyrinogen oxidase (hemK) [Campylobacter upsaliensis RM3195] Length = 265 Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 71/258 (27%), Positives = 117/258 (45%), Gaps = 22/258 (8%) Query: 11 LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKH-ESIHRILGWRDFYNVRLTLSS 69 LC + ++ + D+R+ F ++R K E + DFY + + Sbjct: 25 LCEFLQKDRTWLFLNENLEFDEREYF----ELIRRFKEGEPYEYLFKKADFYGLEFYIEK 80 Query: 70 DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129 PR ++E+L++ L + K + L++G G+G + + L K K DI Sbjct: 81 GVLIPRYDSEILLEKLLELT----HKEKLQNALEIGFGSGILSIILAKNLGL-KIKACDI 135 Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVIVDCLGLE 186 + KAL+IA NA + V D + SD F +E G FD+I SNPPYI++ L Sbjct: 136 NEKALKIALKNAKKHEVL--IDFVLSD-FEKLELRKGEFDLIFSNPPYIKNSY--PLDKW 190 Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246 V++ +P+ +L GG G I + + + + E GY+QK + +I ++ F Sbjct: 191 VQN-EPKNALLGGEKGYEILEKII--IFAYQKEAKFLACEFGYDQKEILSQILDTYN-FK 246 Query: 247 VNAFKDYGGNDRVLLFCR 264 FKD G DR + R Sbjct: 247 AEFFKDENGFDRAFVAKR 264 >gi|170751295|ref|YP_001757555.1| methyltransferase small [Methylobacterium radiotolerans JCM 2831] gi|170657817|gb|ACB26872.1| methyltransferase small [Methylobacterium radiotolerans JCM 2831] Length = 324 Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 33/81 (40%), Positives = 49/81 (60%), Gaps = 1/81 (1%) Query: 95 KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154 R V R +D+G G+GA + + K +P + V VDI+ A+ A+ NA G ++ D + Sbjct: 139 SRPVRRAVDIGCGSGAAGICVAKRAPGAEVVLVDINPAAMRAARVNARLAG-TDGVDVRR 197 Query: 155 SDWFSSVEGLFDVIVSNPPYI 175 SD VEG FD+IVSNPP++ Sbjct: 198 SDMLRDVEGQFDLIVSNPPFM 218 >gi|151567849|pdb|2PJD|A Chain A, Crystal Structure Of 16s Rrna Methyltransferase Rsmc Length = 343 Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 37/122 (30%), Positives = 59/122 (48%), Gaps = 23/122 (18%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LD+G G G + +A + SP + D+S A+E +++ NGV + S+ FS Sbjct: 199 KVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVEG--EVFASNVFS 256 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 V+G FD I+SNPP+ + + + SLD +T+ G RHLN Sbjct: 257 EVKGRFDXIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 295 Query: 220 DG 221 G Sbjct: 296 GG 297 >gi|257056938|ref|YP_003134770.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Saccharomonospora viridis DSM 43017] gi|256586810|gb|ACU97943.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Saccharomonospora viridis DSM 43017] Length = 287 Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 58/195 (29%), Positives = 86/195 (44%), Gaps = 14/195 (7%) Query: 72 FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131 F PRPETELL++ L R+ ++DL TG+GA+ LA+ + P VD Sbjct: 92 FIPRPETELLLEWGLKLLK----GREHPVVVDLCTGSGALALAVAEARPDAVVYAVDNDP 147 Query: 132 KALEIAKSN----AVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184 AL A+ N A R D F+ ++GL D+++ NPPY+ + Sbjct: 148 SALAWARHNADLRAEAGDTPIRLYSGDVTDDTVFAELDGLVDLVLCNPPYVPEGT--PVP 205 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 EV D+DP ++ DGL R + +R L G ++E V + E R++ Sbjct: 206 PEVADYDPPHAVFAPEDGLGIIRHVVTMAARLLRPGGGVAIEHDETHAHSVPPLLEVRRV 265 Query: 245 FL-VNAFKDYGGNDR 258 V KD G R Sbjct: 266 LTDVTTHKDLAGRPR 280 >gi|295098508|emb|CBK87598.1| 16S rRNA m(2)G 1207 methyltransferase [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 342 Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 37/122 (30%), Positives = 55/122 (45%), Gaps = 23/122 (18%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LD+G G G + L SP + D+S A+E +++ NG+ D S+ FS Sbjct: 199 KVLDVGCGAGVLSTVLASHSPKVRLTLCDVSAPAVEASRATLAANGIEG--DVFASNVFS 256 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 V G FD+I+SNPP+ DG L +T+ G +RHLN Sbjct: 257 DVTGRFDMIISNPPF---------------------HDGMETSLEAAQTLIRGATRHLNS 295 Query: 220 DG 221 G Sbjct: 296 GG 297 >gi|213968468|ref|ZP_03396611.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato T1] gi|301386087|ref|ZP_07234505.1| hypothetical protein PsyrptM_25774 [Pseudomonas syringae pv. tomato Max13] gi|302060245|ref|ZP_07251786.1| hypothetical protein PsyrptK_09647 [Pseudomonas syringae pv. tomato K40] gi|302131987|ref|ZP_07257977.1| hypothetical protein PsyrptN_11384 [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213926756|gb|EEB60308.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato T1] Length = 319 Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 32/79 (40%), Positives = 45/79 (56%), Gaps = 1/79 (1%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 + R D+G GTGA L + P + VDI+ KAL A++NAV G+ SD Sbjct: 140 IKRAADIGCGTGAGALLIAVARPDAQVYAVDINPKALHFAQANAVVAGL-HNMQCCHSDI 198 Query: 158 FSSVEGLFDVIVSNPPYIE 176 S + G FD+IV+NPPY++ Sbjct: 199 LSGLTGNFDLIVANPPYMK 217 >gi|150402974|ref|YP_001330268.1| putative methylase [Methanococcus maripaludis C7] gi|150034004|gb|ABR66117.1| putative methylase [Methanococcus maripaludis C7] Length = 202 Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 44/164 (26%), Positives = 84/164 (51%), Gaps = 15/164 (9%) Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 +++ + P ++ELL+++ L ++ + V LD+GTG+G + +K+ Sbjct: 10 IKIKTHPKVYVPAEDSELLIEN-----LVDVKNKSV---LDVGTGSGIQAINAVKQGAV- 60 Query: 123 KGVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181 K +G+DI+ A++ AK N+ N ++ E+ SD F +++ FDVI+ N PY+ + + Sbjct: 61 KVIGIDINPYAVDCAKINSELNEINPEKLSFKTSDLFKNIDEKFDVILFNAPYLPTSDEE 120 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225 L + + DGG DG D V+ +LN++G + Sbjct: 121 KLEKYL-----NYAFDGGTDGREVLDKFLDEVTNYLNENGTVQI 159 >gi|329770374|ref|ZP_08261756.1| hypothetical protein HMPREF0433_01520 [Gemella sanguinis M325] gi|328836497|gb|EGF86157.1| hypothetical protein HMPREF0433_01520 [Gemella sanguinis M325] Length = 198 Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 22/79 (27%), Positives = 50/79 (63%) Query: 95 KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154 +++ + D+G G G + + L K++P + +D++ ++LE++K N N + + + ++ Sbjct: 55 EKEYADVADVGCGYGVISIFLAKKNPNYNFTMIDVNNRSLELSKKNIELNKIDNKIEIIE 114 Query: 155 SDWFSSVEGLFDVIVSNPP 173 S F +V+G FD++++NPP Sbjct: 115 SSSFDNVKGTFDIVLTNPP 133 >gi|150401181|ref|YP_001324947.1| putative methylase [Methanococcus aeolicus Nankai-3] gi|150013884|gb|ABR56335.1| putative methylase [Methanococcus aeolicus Nankai-3] Length = 208 Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 47/157 (29%), Positives = 81/157 (51%), Gaps = 17/157 (10%) Query: 72 FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131 +EP ++ELL+++ L ++ + V LD+GTGTG + K+ K +G+DI+ Sbjct: 21 YEPAEDSELLINN-----LTEVKNKSV---LDVGTGTGIQAINAKKQGAK-KVIGIDINP 71 Query: 132 KALEIAKSNAVTNGV-SERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVDCLGLEVR 188 A+E A N N + + + ++SD F+S+ E FDVI+ N PY+ + + L + Sbjct: 72 YAIETAIENIKLNKLDANKISFIESDLFNSIKTEYKFDVILFNAPYLPTTEEEKLEKYLN 131 Query: 189 DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225 + DGGIDG VS +L ++G+ + Sbjct: 132 -----YAFDGGIDGRKVLDRFIKEVSNYLKENGVIQI 163 >gi|284046461|ref|YP_003396801.1| methyltransferase small [Conexibacter woesei DSM 14684] gi|283950682|gb|ADB53426.1| methyltransferase small [Conexibacter woesei DSM 14684] Length = 376 Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 44/124 (35%), Positives = 64/124 (51%), Gaps = 15/124 (12%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+LDL TG+G LA L ++ + V V++ +A+ N + NG+ ER D D + Sbjct: 164 RVLDLCTGSG--LLATLPDA--AQVVAVELDPVTASVARFNVLLNGLGERIDVRDGDLYE 219 Query: 160 SVEG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217 V G FD+IV+NPP + S G+ V ++ DGG DG + R + GV RHL Sbjct: 220 PVAGEQPFDLIVANPPIVPS----PEGISV-----PLAGDGGPDGDAALRRVLAGVERHL 270 Query: 218 NKDG 221 G Sbjct: 271 APGG 274 >gi|239787480|emb|CAX83951.1| Modification methylase, HemK family [uncultured bacterium] Length = 321 Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 57/202 (28%), Positives = 92/202 (45%), Gaps = 5/202 (2%) Query: 30 LDDRQRFFLTNAI-VRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAF 88 L RQR L I +R+ + + ++G F + PR E ++D + Sbjct: 70 LTGRQRRRLAWLIALRTRRRLPLPYLVGEAFFAGRSFHVDRRVLIPRSLIENILDDSEGL 129 Query: 89 SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV-S 147 +L ++ + RILDLGTG+G + + L P + G DI +AL +A N + Sbjct: 130 AL-WMDPERLGRILDLGTGSGCLAITLALAYPGARVDGSDICPRALAVADINRRRFRLGG 188 Query: 148 ERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206 +R ++SD F ++ +D+IV+NPPY+ L E R +P +L G GL+ Sbjct: 189 DRLRLIRSDLFQNLPRECYDLIVANPPYVAPGEYASLPREYR-HEPGRALRAGEGGLALV 247 Query: 207 RTIADGVSRHLNKDGLCSVEIG 228 I + HL G E+G Sbjct: 248 AAILRQAADHLAPGGWLICEVG 269 >gi|66048324|ref|YP_238165.1| hypothetical protein Psyr_5100 [Pseudomonas syringae pv. syringae B728a] gi|63259031|gb|AAY40127.1| conserved hypothetical protein [Pseudomonas syringae pv. syringae B728a] gi|330970293|gb|EGH70359.1| hypothetical protein PSYAR_07359 [Pseudomonas syringae pv. aceris str. M302273PT] Length = 315 Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 31/79 (39%), Positives = 47/79 (59%), Gaps = 1/79 (1%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 V R +D+G GTGA + + P + VDI+ KAL A++NA G+ + + SD Sbjct: 135 VNRAVDIGCGTGAGAMLIAVARPQAQVHAVDINPKALHFAQTNAAVAGL-KNMECCHSDI 193 Query: 158 FSSVEGLFDVIVSNPPYIE 176 S + G FD+IV+NPPY++ Sbjct: 194 LSGLSGNFDLIVANPPYMK 212 >gi|297519416|ref|ZP_06937802.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli OP50] Length = 144 Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 37/121 (30%), Positives = 59/121 (48%), Gaps = 23/121 (19%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LD+G G G + +A + SP + D+S A+E +++ NGV + S+ FS Sbjct: 1 MLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVEG--EVFASNVFSE 58 Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220 V+G FD+I+SNPP+ + + + SLD +T+ G RHLN Sbjct: 59 VKGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNSG 97 Query: 221 G 221 G Sbjct: 98 G 98 >gi|168464529|ref|ZP_02698432.1| ribosomal RNA small subunit methyltransferase C [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|195632765|gb|EDX51219.1| ribosomal RNA small subunit methyltransferase C [Salmonella enterica subsp. enterica serovar Newport str. SL317] Length = 342 Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 37/122 (30%), Positives = 59/122 (48%), Gaps = 23/122 (18%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LD+G G G + AL SP + D+S A+E +++ NG+ + S+ FS Sbjct: 199 KVLDVGCGAGVLSAALASHSPKVRLTLCDVSAPAVEASRATLAANGLEG--EVFASNVFS 256 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 V+G FD+I+SNPP+ + + + SLD +T+ G RHLN Sbjct: 257 EVKGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 295 Query: 220 DG 221 G Sbjct: 296 GG 297 >gi|194444545|ref|YP_002043797.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|226712976|sp|B4T4F9|RSMC_SALNS RecName: Full=Ribosomal RNA small subunit methyltransferase C; AltName: Full=16S rRNA m2G1207 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rsmC gi|194403208|gb|ACF63430.1| ribosomal RNA small subunit methyltransferase C [Salmonella enterica subsp. enterica serovar Newport str. SL254] Length = 342 Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 37/122 (30%), Positives = 59/122 (48%), Gaps = 23/122 (18%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LD+G G G + AL SP + D+S A+E +++ NG+ + S+ FS Sbjct: 199 KVLDVGCGAGVLSAALASHSPKVRLTLCDVSAPAVEASRATLAANGLEG--EVFASNIFS 256 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 V+G FD+I+SNPP+ + + + SLD +T+ G RHLN Sbjct: 257 EVKGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 295 Query: 220 DG 221 G Sbjct: 296 GG 297 >gi|731536|sp|P39200|YFCB_VIBAN RecName: Full=Uncharacterized adenine-specific methylase yfcB Length = 148 Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 33/102 (32%), Positives = 58/102 (56%), Gaps = 2/102 (1%) Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLE 186 DIS AL++A+ N +G+ ++ ++SD F + + +D+IVSNPPY++ ++ L E Sbjct: 1 DISTDALQVAEQNIQDHGMEQQVFPIRSDLFRDLPKEKYDLIVSNPPYVDQEDMNSLPKE 60 Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228 + +P + L G DGL R I + +L +G+ E+G Sbjct: 61 FK-HEPELGLAAGTDGLKLVRRILANAAGYLTDNGILICEVG 101 >gi|134046649|ref|YP_001098134.1| putative methylase [Methanococcus maripaludis C5] gi|132664274|gb|ABO35920.1| putative methylase [Methanococcus maripaludis C5] Length = 202 Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 44/164 (26%), Positives = 84/164 (51%), Gaps = 15/164 (9%) Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 +++ + + P ++ELL+++ L ++ + V LD+GTG+G + +K+ Sbjct: 10 IKIKTHPNVYVPAEDSELLIEN-----LVDVKNKSV---LDVGTGSGIQAINAVKKGAS- 60 Query: 123 KGVGVDISCKALEIAKSNAVTNGV-SERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181 K +G+DI+ A+E AK+N+ +N + S++ D F +++ FDVI+ N PY+ + + Sbjct: 61 KVIGIDINPYAVECAKTNSKSNEINSKKLSFKTGDLFKNIDEKFDVILFNAPYLPTSDEE 120 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225 L + + DGG +G D V HLN+ G + Sbjct: 121 KLEKYL-----NYAFDGGKNGREVLDKFLDEVINHLNEKGTVQI 159 >gi|205355276|ref|YP_002229077.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|226712974|sp|B5R9T9|RSMC_SALG2 RecName: Full=Ribosomal RNA small subunit methyltransferase C; AltName: Full=16S rRNA m2G1207 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rsmC gi|205275057|emb|CAR40145.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|326630441|gb|EGE36784.1| Ribosomal RNA small subunit methyltransferase C [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 342 Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 37/122 (30%), Positives = 59/122 (48%), Gaps = 23/122 (18%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LD+G G G + AL SP + D+S A+E +++ NG+ + S+ FS Sbjct: 199 KVLDVGCGAGVLSAALASHSPKVRLTLCDVSAPAVEASRATLAANGLEG--EVFASNVFS 256 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 V+G FD+I+SNPP+ + + + SLD +T+ G RHLN Sbjct: 257 EVKGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 295 Query: 220 DG 221 G Sbjct: 296 GG 297 >gi|260593449|ref|ZP_05858907.1| protein-(glutamine-N5) methyltransferase [Prevotella veroralis F0319] gi|260534565|gb|EEX17182.1| protein-(glutamine-N5) methyltransferase [Prevotella veroralis F0319] Length = 287 Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 52/192 (27%), Positives = 86/192 (44%), Gaps = 10/192 (5%) Query: 38 LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELL---VDSALAFSLPRIE 94 L + R E + +LG F ++ PRPETE+L +++ ++ Sbjct: 54 LDKIMQRLASSEPVQYVLGMETFCGRSFKVAPGVLIPRPETEVLCHWIEADNNHPYCALQ 113 Query: 95 KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA--VTNGVSERFDT 152 +++LD+GTG+G + + L + DIS AL IA+ N + V + + Sbjct: 114 PPVPLQVLDVGTGSGCIAVTLALDLYNSAVTAWDISADALLIARDNVHRWDSSVVLQMED 173 Query: 153 LQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL---DGGIDGLSHYRTI 209 + S ++ E +D+IVSNPPYI + V ++P +L D D + YR I Sbjct: 174 ILSISATAKEQKWDIIVSNPPYICDKERSSMAENVLKYEPETALFVPDN--DPIKFYRAI 231 Query: 210 ADGVSRHLNKDG 221 A+ L DG Sbjct: 232 AEYGVTALTDDG 243 >gi|260174909|ref|ZP_05761321.1| putative RNA methyltransferase [Bacteroides sp. D2] gi|315923152|ref|ZP_07919392.1| conserved hypothetical protein [Bacteroides sp. D2] gi|313697027|gb|EFS33862.1| conserved hypothetical protein [Bacteroides sp. D2] Length = 236 Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 60/169 (35%), Positives = 85/169 (50%), Gaps = 17/169 (10%) Query: 100 RILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW- 157 RILD+GTGTG V L L + S P K V ++I A A+ N + ER + +Q+D+ Sbjct: 40 RILDIGTGTGLVALMLAQRSLPDAKIVALEIDEAAAGQARENVARSPWRERVEVVQADFK 99 Query: 158 -FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216 + S + FDVIVSNPPY VD L D + + D L+ Y + +GVS Sbjct: 100 KYRSSDK-FDVIVSNPPY----FVDSLECP----DRQRAAARHNDSLT-YDDLLEGVSGL 149 Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRKLFLV---NAFKDYGG-NDRVLL 261 L ++G +V I + V +I +KL+ V N GG RVL+ Sbjct: 150 LTENGFFTVVIPADVAERVKKIASIKKLYAVRQLNVITKPGGIPKRVLI 198 >gi|330945099|gb|EGH46833.1| hypothetical protein PSYPI_32873 [Pseudomonas syringae pv. pisi str. 1704B] Length = 220 Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 30/79 (37%), Positives = 47/79 (59%), Gaps = 1/79 (1%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 + R +D+G GTGA + + P + VDI+ KAL A++NA G+ + + SD Sbjct: 135 INRAVDIGCGTGAGAMLIAVARPQAQVHAVDINPKALHFAQTNAAVAGL-KNMECCHSDI 193 Query: 158 FSSVEGLFDVIVSNPPYIE 176 S + G FD+IV+NPPY++ Sbjct: 194 LSGLSGNFDLIVANPPYMK 212 >gi|168244550|ref|ZP_02669482.1| ribosomal RNA small subunit methyltransferase C [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|194448966|ref|YP_002048576.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|226712975|sp|B4TGY8|RSMC_SALHS RecName: Full=Ribosomal RNA small subunit methyltransferase C; AltName: Full=16S rRNA m2G1207 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rsmC gi|194407270|gb|ACF67489.1| ribosomal RNA small subunit methyltransferase C [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|205336629|gb|EDZ23393.1| ribosomal RNA small subunit methyltransferase C [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] Length = 342 Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 37/122 (30%), Positives = 59/122 (48%), Gaps = 23/122 (18%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LD+G G G + AL SP + D+S A+E +++ NG+ + S+ FS Sbjct: 199 KVLDVGCGAGVLSAALASHSPKVRLTLCDVSAPAVEASRATLAANGLEG--EVFASNVFS 256 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 V+G FD+I+SNPP+ + + + SLD +T+ G RHLN Sbjct: 257 EVKGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 295 Query: 220 DG 221 G Sbjct: 296 GG 297 >gi|161617866|ref|YP_001591830.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|226712977|sp|A9N7C4|RSMC_SALPB RecName: Full=Ribosomal RNA small subunit methyltransferase C; AltName: Full=16S rRNA m2G1207 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rsmC gi|161367230|gb|ABX70998.1| hypothetical protein SPAB_05733 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] Length = 342 Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 37/122 (30%), Positives = 59/122 (48%), Gaps = 23/122 (18%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LD+G G G + AL SP + D+S A+E +++ NG+ + S+ FS Sbjct: 199 KVLDVGCGAGVLSAALASHSPKVRLTLCDVSAPAVEASRATLAANGLEG--EVFASNVFS 256 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 V+G FD+I+SNPP+ + + + SLD +T+ G RHLN Sbjct: 257 EVKGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 295 Query: 220 DG 221 G Sbjct: 296 GG 297 >gi|311268958|ref|XP_003132283.1| PREDICTED: hemK methyltransferase family member 1-like [Sus scrofa] Length = 264 Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 55/210 (26%), Positives = 98/210 (46%), Gaps = 13/210 (6%) Query: 50 SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPR---IEKRDVVRILDLGT 106 + I G DF+ + L + RPETE LV+ L R + IL++G Sbjct: 2 PVQYIPGEWDFHGLSLKMVPPAIILRPETEELVEWVLEEVTQRPHAVGAHGGPLILEVGC 61 Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD------TLQSDWFSS 160 G+GA+ L+LL + P + + VD A+ + NA + +R TL+ +W Sbjct: 62 GSGAISLSLLSKLPESQVIAVDKGEAAICLTHENAQRLQLQDRIRIIPLDVTLEQNWAHL 121 Query: 161 VE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL---SHYRTIADGVSRH 216 + G D+++SNPPY+ ++ L E+ ++ +LDGG +G+ +H +A + + Sbjct: 122 LPWGPVDLVISNPPYVFHRDMEQLAPEILSYEDPTALDGGEEGMDIITHILALAPRLLKD 181 Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246 D L + I + ++ + + S L L Sbjct: 182 SGSDPLFLMPIPHQLRIFPLPLASSMSLQL 211 >gi|204927148|ref|ZP_03218350.1| ribosomal RNA small subunit methyltransferase C [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|204323813|gb|EDZ09008.1| ribosomal RNA small subunit methyltransferase C [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] Length = 342 Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 37/122 (30%), Positives = 59/122 (48%), Gaps = 23/122 (18%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LD+G G G + AL SP + D+S A+E +++ NG+ + S+ FS Sbjct: 199 KVLDVGCGAGVLSAALASHSPKVRLTLCDVSAPAVEASRATLAANGLEG--EVFASNVFS 256 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 V+G FD+I+SNPP+ + + + SLD +T+ G RHLN Sbjct: 257 EVKGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 295 Query: 220 DG 221 G Sbjct: 296 GG 297 >gi|299145710|ref|ZP_07038778.1| SmtA protein [Bacteroides sp. 3_1_23] gi|298516201|gb|EFI40082.1| SmtA protein [Bacteroides sp. 3_1_23] Length = 236 Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 58/169 (34%), Positives = 86/169 (50%), Gaps = 17/169 (10%) Query: 100 RILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW- 157 RILD+GTGTG V L L + S P V ++I A+ A+ N + + ER + +Q+D+ Sbjct: 40 RILDIGTGTGLVALMLAQRSLPDTNIVALEIDEAAVGQARENVIRSPWKERVEVVQADFR 99 Query: 158 -FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216 + S + FDVIVSNPPY +D L D + + D L+ Y + +GVS Sbjct: 100 KYRSSDK-FDVIVSNPPY----FIDSLECP----DRQRAAARHNDSLT-YDDLLEGVSGL 149 Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRKLFLV---NAFKDYGG-NDRVLL 261 L ++G +V I + V +I +KL+ V N GG RVL+ Sbjct: 150 LTENGFFTVVIPADVAERVKKIASIKKLYAVRQLNVITKPGGIPKRVLI 198 >gi|321222476|gb|EFX47548.1| Ribosomal RNA small subunit methyltransferase C [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] Length = 342 Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 37/122 (30%), Positives = 59/122 (48%), Gaps = 23/122 (18%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LD+G G G + AL SP + D+S A+E +++ NG+ + S+ FS Sbjct: 199 KVLDVGCGAGVLSAALASHSPKVRLTLCDVSAPAVEASRATLAANGLEG--EVFASNVFS 256 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 V+G FD+I+SNPP+ + + + SLD +T+ G RHLN Sbjct: 257 EVKGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 295 Query: 220 DG 221 G Sbjct: 296 GG 297 >gi|167552222|ref|ZP_02345975.1| ribosomal RNA small subunit methyltransferase C [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205323159|gb|EDZ10998.1| ribosomal RNA small subunit methyltransferase C [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] Length = 342 Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 37/122 (30%), Positives = 59/122 (48%), Gaps = 23/122 (18%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LD+G G G + AL SP + D+S A+E +++ NG+ + S+ FS Sbjct: 199 KVLDVGCGAGVLSAALASHSPKVRLTLCDVSAPAVEASRATLAANGLEG--EVFASNVFS 256 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 V+G FD+I+SNPP+ + + + SLD +T+ G RHLN Sbjct: 257 EVKGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 295 Query: 220 DG 221 G Sbjct: 296 GG 297 >gi|16767797|ref|NP_463412.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|197263702|ref|ZP_03163776.1| ribosomal RNA small subunit methyltransferase C [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|198242075|ref|YP_002218430.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|207859682|ref|YP_002246333.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|81853618|sp|Q8ZJW6|RSMC_SALTY RecName: Full=Ribosomal RNA small subunit methyltransferase C; AltName: Full=16S rRNA m2G1207 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rsmC gi|226712972|sp|B5FTB3|RSMC_SALDC RecName: Full=Ribosomal RNA small subunit methyltransferase C; AltName: Full=16S rRNA m2G1207 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rsmC gi|226712973|sp|B5R2I6|RSMC_SALEP RecName: Full=Ribosomal RNA small subunit methyltransferase C; AltName: Full=16S rRNA m2G1207 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rsmC gi|16423121|gb|AAL23371.1| 16S ribosomal rRNA [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|197241957|gb|EDY24577.1| ribosomal RNA small subunit methyltransferase C [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197936591|gb|ACH73924.1| ribosomal RNA small subunit methyltransferase C [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|206711485|emb|CAR35870.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|261249638|emb|CBG27508.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267996916|gb|ACY91801.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301161036|emb|CBW20573.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312915650|dbj|BAJ39624.1| 16S rRNA methyltransferase C [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|323132895|gb|ADX20325.1| Ribosomal RNA small subunit methyltransferase C [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|326626237|gb|EGE32582.1| Ribosomal RNA small subunit methyltransferase C [Salmonella enterica subsp. enterica serovar Dublin str. 3246] gi|332991362|gb|AEF10345.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 342 Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 37/122 (30%), Positives = 59/122 (48%), Gaps = 23/122 (18%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LD+G G G + AL SP + D+S A+E +++ NG+ + S+ FS Sbjct: 199 KVLDVGCGAGVLSAALASHSPKVRLTLCDVSAPAVEASRATLAANGLEG--EVFASNVFS 256 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 V+G FD+I+SNPP+ + + + SLD +T+ G RHLN Sbjct: 257 EVKGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 295 Query: 220 DG 221 G Sbjct: 296 GG 297 >gi|16763351|ref|NP_458968.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29144829|ref|NP_808171.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|213051998|ref|ZP_03344876.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213419349|ref|ZP_03352415.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] gi|213427560|ref|ZP_03360310.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213650120|ref|ZP_03380173.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|289828938|ref|ZP_06546656.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|81853154|sp|Q8Z0V2|RSMC_SALTI RecName: Full=Ribosomal RNA small subunit methyltransferase C; AltName: Full=16S rRNA m2G1207 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rsmC gi|25513266|pir||AH1071 conserved hypothetical protein STY4906 [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16505660|emb|CAD03391.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Typhi] gi|29140468|gb|AAO72031.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] Length = 342 Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 37/122 (30%), Positives = 59/122 (48%), Gaps = 23/122 (18%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LD+G G G + AL SP + D+S A+E +++ NG+ + S+ FS Sbjct: 199 KVLDVGCGAGVLSAALASHSPKVRLTLCDVSAPAVEASRATLAANGLEG--EVFASNVFS 256 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 V+G FD+I+SNPP+ + + + SLD +T+ G RHLN Sbjct: 257 EVKGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 295 Query: 220 DG 221 G Sbjct: 296 GG 297 >gi|200387205|ref|ZP_03213817.1| ribosomal RNA small subunit methyltransferase C [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|199604303|gb|EDZ02848.1| ribosomal RNA small subunit methyltransferase C [Salmonella enterica subsp. enterica serovar Virchow str. SL491] Length = 342 Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 37/122 (30%), Positives = 59/122 (48%), Gaps = 23/122 (18%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LD+G G G + AL SP + D+S A+E +++ NG+ + S+ FS Sbjct: 199 KVLDVGCGAGVLSAALASHSPKVRLTLCDVSAPAVEASRATLAANGLEG--EVFASNVFS 256 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 V+G FD+I+SNPP+ + + + SLD +T+ G RHLN Sbjct: 257 EVKGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 295 Query: 220 DG 221 G Sbjct: 296 GG 297 >gi|168262394|ref|ZP_02684367.1| ribosomal RNA small subunit methyltransferase C [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|205348826|gb|EDZ35457.1| ribosomal RNA small subunit methyltransferase C [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] Length = 342 Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 37/122 (30%), Positives = 59/122 (48%), Gaps = 23/122 (18%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LD+G G G + AL SP + D+S A+E +++ NG+ + S+ FS Sbjct: 199 KVLDVGCGAGVLSAALASHSPKVRLTLCDVSAPAVEASRATLAANGLEG--EVFASNVFS 256 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 V+G FD+I+SNPP+ + + + SLD +T+ G RHLN Sbjct: 257 EVKGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 295 Query: 220 DG 221 G Sbjct: 296 GG 297 >gi|56416330|ref|YP_153405.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197365253|ref|YP_002144890.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|81821528|sp|Q5PK16|RSMC_SALPA RecName: Full=Ribosomal RNA small subunit methyltransferase C; AltName: Full=16S rRNA m2G1207 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rsmC gi|226712978|sp|B5BL07|RSMC_SALPK RecName: Full=Ribosomal RNA small subunit methyltransferase C; AltName: Full=16S rRNA m2G1207 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rsmC gi|56130587|gb|AAV80093.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197096730|emb|CAR62353.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] Length = 342 Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 37/122 (30%), Positives = 59/122 (48%), Gaps = 23/122 (18%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LD+G G G + AL SP + D+S A+E +++ NG+ + S+ FS Sbjct: 199 KVLDVGCGAGVLSAALASHSPKVRLTLCDVSAPAVEASRATLAANGLEG--EVFASNVFS 256 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 V+G FD+I+SNPP+ + + + SLD +T+ G RHLN Sbjct: 257 EVKGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 295 Query: 220 DG 221 G Sbjct: 296 GG 297 >gi|330976371|gb|EGH76428.1| hypothetical protein PSYAP_06959 [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 315 Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 30/77 (38%), Positives = 46/77 (59%), Gaps = 1/77 (1%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R +D+G GTGA + + P + VDI+ KAL A++NA G+ + + SD S Sbjct: 137 RAVDIGCGTGAGAMLIAVARPQAQVHAVDINPKALHFAQTNATVAGL-KNMECCHSDILS 195 Query: 160 SVEGLFDVIVSNPPYIE 176 + G FD+IV+NPPY++ Sbjct: 196 GLSGSFDLIVANPPYMK 212 >gi|168822095|ref|ZP_02834095.1| ribosomal RNA small subunit methyltransferase C [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205341377|gb|EDZ28141.1| ribosomal RNA small subunit methyltransferase C [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] Length = 342 Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 37/122 (30%), Positives = 59/122 (48%), Gaps = 23/122 (18%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LD+G G G + AL SP + D+S A+E +++ NG+ + S+ FS Sbjct: 199 KVLDVGCGAGVLSAALASHSPKVRLTLCDVSAPAVEASRATLAANGLEG--EVFASNVFS 256 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 V+G FD+I+SNPP+ + + + SLD +T+ G RHLN Sbjct: 257 EVKGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 295 Query: 220 DG 221 G Sbjct: 296 GG 297 >gi|238910715|ref|ZP_04654552.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|322615721|gb|EFY12641.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322620569|gb|EFY17429.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322621804|gb|EFY18654.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322627529|gb|EFY24320.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322630836|gb|EFY27600.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322637946|gb|EFY34647.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322642216|gb|EFY38824.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322644937|gb|EFY41469.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322651101|gb|EFY47486.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322656643|gb|EFY52931.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322658699|gb|EFY54956.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322661859|gb|EFY58075.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322666395|gb|EFY62573.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322672449|gb|EFY68561.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322676243|gb|EFY72314.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322679668|gb|EFY75713.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322684378|gb|EFY80382.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323191860|gb|EFZ77109.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323196669|gb|EFZ81816.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323200938|gb|EFZ86007.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323209335|gb|EFZ94268.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323212978|gb|EFZ97780.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323216721|gb|EGA01446.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323223319|gb|EGA07656.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323226154|gb|EGA10371.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323228807|gb|EGA12936.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323236582|gb|EGA20658.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323239918|gb|EGA23965.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323242035|gb|EGA26064.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323247524|gb|EGA31479.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323250626|gb|EGA34508.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323259355|gb|EGA42997.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323263767|gb|EGA47288.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323265639|gb|EGA49135.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323270084|gb|EGA53532.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 342 Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 37/122 (30%), Positives = 59/122 (48%), Gaps = 23/122 (18%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LD+G G G + AL SP + D+S A+E +++ NG+ + S+ FS Sbjct: 199 KVLDVGCGAGVLSAALASHSPKVRLTLCDVSAPAVEASRATLAANGLEG--EVFASNVFS 256 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 V+G FD+I+SNPP+ + + + SLD +T+ G RHLN Sbjct: 257 EVKGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 295 Query: 220 DG 221 G Sbjct: 296 GG 297 >gi|168230199|ref|ZP_02655257.1| ribosomal RNA small subunit methyltransferase C [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|168234688|ref|ZP_02659746.1| ribosomal RNA small subunit methyltransferase C (rRNA(guanine-N(2)-)-methyltransferase) [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|194471541|ref|ZP_03077525.1| ribosomal RNA small subunit methyltransferase C [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194736271|ref|YP_002117470.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197251566|ref|YP_002149497.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|226712970|sp|B5F512|RSMC_SALA4 RecName: Full=Ribosomal RNA small subunit methyltransferase C; AltName: Full=16S rRNA m2G1207 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rsmC gi|226712979|sp|B4TU29|RSMC_SALSV RecName: Full=Ribosomal RNA small subunit methyltransferase C; AltName: Full=16S rRNA m2G1207 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rsmC gi|194457905|gb|EDX46744.1| ribosomal RNA small subunit methyltransferase C [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194711773|gb|ACF90994.1| ribosomal RNA small subunit methyltransferase C [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197215269|gb|ACH52666.1| ribosomal RNA small subunit methyltransferase C [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197291795|gb|EDY31145.1| ribosomal RNA small subunit methyltransferase C (rRNA(guanine-N(2)-)-methyltransferase) [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|205335077|gb|EDZ21841.1| ribosomal RNA small subunit methyltransferase C [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] Length = 342 Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 37/122 (30%), Positives = 59/122 (48%), Gaps = 23/122 (18%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LD+G G G + AL SP + D+S A+E +++ NG+ + S+ FS Sbjct: 199 KVLDVGCGAGVLSAALASHSPKVRLTLCDVSAPAVEASRATLAANGLEG--EVFASNVFS 256 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 V+G FD+I+SNPP+ + + + SLD +T+ G RHLN Sbjct: 257 EVKGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 295 Query: 220 DG 221 G Sbjct: 296 GG 297 >gi|295084254|emb|CBK65777.1| Predicted O-methyltransferase [Bacteroides xylanisolvens XB1A] Length = 236 Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 56/161 (34%), Positives = 74/161 (45%), Gaps = 14/161 (8%) Query: 100 RILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 RILD+GTGTG V L L + S P K V ++I A A+ N + ER + +Q+D+ Sbjct: 40 RILDIGTGTGLVALMLAQRSLPDAKIVALEIDEAAAGQARENVARSPWQERIEVVQADFK 99 Query: 159 SSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217 FDVIVSNPPY VD LE D R + Y + +GV+R L Sbjct: 100 KHRSSDKFDVIVSNPPY----FVD--SLECPD---RQRTAARHNNSLTYEELLEGVNRLL 150 Query: 218 NKDGLCSVEIGYNQKVDVVRIFESRKLFLV---NAFKDYGG 255 DGL + I + V I KL+ + N GG Sbjct: 151 AADGLFTAVIPTDVVDRVKAIASMNKLYAIRQLNVITKPGG 191 >gi|262274926|ref|ZP_06052737.1| predicted O-methyltransferase [Grimontia hollisae CIP 101886] gi|262221489|gb|EEY72803.1| predicted O-methyltransferase [Grimontia hollisae CIP 101886] Length = 269 Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 33/87 (37%), Positives = 45/87 (51%), Gaps = 5/87 (5%) Query: 94 EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153 E +D ILD+GTGTG + L + + P + +DI A E A+ NA + +R D Sbjct: 68 EAKDGHTILDIGTGTGLLALMMAQRFPTARITALDIDAHAAETARFNAEQSAWHDRIDVH 127 Query: 154 QSD---WFSSVEGLFDVIVSNPPYIES 177 D W SS + FD IV NPPY + Sbjct: 128 HQDICTWESSAQ--FDTIVCNPPYFTT 152 >gi|289677510|ref|ZP_06498400.1| hypothetical protein PsyrpsF_29771 [Pseudomonas syringae pv. syringae FF5] Length = 315 Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 30/77 (38%), Positives = 46/77 (59%), Gaps = 1/77 (1%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R +D+G GTGA + + P + VDI+ KAL A++NA G+ + + SD S Sbjct: 137 RAVDIGCGTGAGAMLIAVARPQAQVHAVDINPKALHFAQTNATVAGL-KNMECCHSDILS 195 Query: 160 SVEGLFDVIVSNPPYIE 176 + G FD+IV+NPPY++ Sbjct: 196 GLSGNFDLIVANPPYMK 212 >gi|288960113|ref|YP_003450453.1| methyltransferase [Azospirillum sp. B510] gi|288912421|dbj|BAI73909.1| methyltransferase [Azospirillum sp. B510] Length = 256 Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 31/82 (37%), Positives = 44/82 (53%), Gaps = 4/82 (4%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+LD+GTGTGA L L P VG++ A A+ NA GV+ER ++ D + Sbjct: 54 RVLDVGTGTGAAALCLAVRVPGVAVVGLEQRADACAFARRNAALTGVAERVTVVEGDLLA 113 Query: 160 SVE----GLFDVIVSNPPYIES 177 E G FD ++ NPPY+ + Sbjct: 114 PPETVGGGGFDRVMMNPPYLRA 135 >gi|320088989|emb|CBY98745.1| 16S rRNA m2G 1207 methylse [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] Length = 342 Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 37/122 (30%), Positives = 59/122 (48%), Gaps = 23/122 (18%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LD+G G G + AL SP + D+S A+E +++ NG+ + S+ FS Sbjct: 199 KVLDVGCGAGVLSAALASHSPKVRLTLCDVSAPAVEASRATLAANGLEG--EVFASNVFS 256 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 V+G FD+I+SNPP+ + + + SLD +T+ G RHLN Sbjct: 257 EVKGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 295 Query: 220 DG 221 G Sbjct: 296 GG 297 >gi|302185806|ref|ZP_07262479.1| hypothetical protein Psyrps6_05655 [Pseudomonas syringae pv. syringae 642] Length = 315 Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 30/77 (38%), Positives = 46/77 (59%), Gaps = 1/77 (1%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R +D+G GTGA + + P + VDI+ KAL A++NA G+ + + SD S Sbjct: 137 RAVDIGCGTGAGAMLIAVARPQAQVHAVDINPKALHFAQTNAAVAGL-KNMECCHSDILS 195 Query: 160 SVEGLFDVIVSNPPYIE 176 + G FD+IV+NPPY++ Sbjct: 196 GLSGNFDLIVANPPYMK 212 >gi|37527438|ref|NP_930782.1| hypothetical protein plu3566 [Photorhabdus luminescens subsp. laumondii TTO1] gi|36786873|emb|CAE15939.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii TTO1] Length = 283 Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 57/214 (26%), Positives = 91/214 (42%), Gaps = 12/214 (5%) Query: 32 DRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLP 91 DR R A+ + I+G DF + LT+ + F PRP ++++ + Sbjct: 44 DRARDEFMLAVHERCNRIPLGHIVGTVDFDGLPLTVGTGVFIPRPHSQVI----HKWLEN 99 Query: 92 RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV-TNGVSERF 150 + +LDL +G+GA+ LA+ K P K V+ A + N + + Sbjct: 100 EYQAPHGAVVLDLCSGSGAIGLAIAKRRPDLKVTCVEYDDVAFQYLTRNIYRLANWAIKA 159 Query: 151 DTLQS---DW--FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSH 205 D L++ DW FS G +IV+NPPY+ + E + P S+ G DGL Sbjct: 160 DALKADLRDWQAFSQFNGSVALIVANPPYVPE--QQEILPEWEEHHPYASVYSGDDGLDL 217 Query: 206 YRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 R I + L +G +E G +Q V +F Sbjct: 218 ARLIIKQAKQLLQSEGWLVIEHGESQGESVRALF 251 >gi|171779487|ref|ZP_02920451.1| hypothetical protein STRINF_01332 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171282104|gb|EDT47535.1| hypothetical protein STRINF_01332 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 197 Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 33/73 (45%), Positives = 44/73 (60%), Gaps = 3/73 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LDLG G G + ++L K K VDI+ +A+++AK NA NGV D QSD + Sbjct: 61 LLDLGCGYGPLGISLAKVQGV-KPTMVDINNRAIDLAKQNAQKNGVEA--DIFQSDIYEK 117 Query: 161 VEGLFDVIVSNPP 173 V G FD I+SNPP Sbjct: 118 VNGTFDYIISNPP 130 >gi|229085996|ref|ZP_04218218.1| Modification methylase, HemK [Bacillus cereus Rock3-44] gi|228697307|gb|EEL50070.1| Modification methylase, HemK [Bacillus cereus Rock3-44] Length = 260 Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 56/194 (28%), Positives = 85/194 (43%), Gaps = 6/194 (3%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110 + ++G+ +F ++R+ + F PR TE LV A S D+V +DL G+GA Sbjct: 51 LEYVVGYAEFCSLRIEVDRGVFVPRQRTEFLVHQAETLSC----SGDIV--VDLCCGSGA 104 Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170 V +AL + VDI A+ A N G L S+ G +++V+ Sbjct: 105 VGVALAAALGRVELYSVDIDPVAVRCAGRNVTDFGGHVFEGDLYKALPRSLRGHVNILVA 164 Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230 N PY+ + + L E R +P+++LDGG DGL R +A L G +E Sbjct: 165 NVPYVPTKAIKLLPQEARLHEPKVALDGGEDGLDIQRRVAAEAFLWLAPGGHLLIETSEM 224 Query: 231 QKVDVVRIFESRKL 244 Q IF L Sbjct: 225 QAPQTFEIFSGAGL 238 >gi|157377110|ref|YP_001475710.1| rRNA (guanine-N(2)-)-methyltransferase [Shewanella sediminis HAW-EB3] gi|226713000|sp|A8G0F9|RSMC_SHESH RecName: Full=Ribosomal RNA small subunit methyltransferase C; AltName: Full=16S rRNA m2G1207 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rsmC gi|157319484|gb|ABV38582.1| rRNA (guanine-N(2)-)-methyltransferase [Shewanella sediminis HAW-EB3] Length = 343 Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 31/75 (41%), Positives = 41/75 (54%), Gaps = 2/75 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+LD G G G + ALLK P K VDI+ A+E K N + DT SD + Sbjct: 204 RVLDFGCGAGVITAALLKAQPELKVECVDINAMAIESCKLTLAANNFTA--DTYPSDGLT 261 Query: 160 SVEGLFDVIVSNPPY 174 +GLF+ I+SNPP+ Sbjct: 262 QTKGLFNGIISNPPF 276 >gi|62182975|ref|YP_219392.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|81309498|sp|Q57G51|RSMC_SALCH RecName: Full=Ribosomal RNA small subunit methyltransferase C; AltName: Full=16S rRNA m2G1207 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rsmC gi|62130608|gb|AAX68311.1| 16S rRNA m2G 1207 methylse [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|322717481|gb|EFZ09052.1| Ribosomal RNA small subunit methyltransferase C [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 342 Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 37/122 (30%), Positives = 59/122 (48%), Gaps = 23/122 (18%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LD+G G G + AL SP + D+S A+E +++ NG+ + S+ FS Sbjct: 199 KVLDVGCGAGVLSAALASHSPKARLTLCDVSAPAVEASRATLAANGLEG--EVFASNVFS 256 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 V+G FD+I+SNPP+ + + + SLD +T+ G RHLN Sbjct: 257 EVKGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 295 Query: 220 DG 221 G Sbjct: 296 GG 297 >gi|153806353|ref|ZP_01959021.1| hypothetical protein BACCAC_00614 [Bacteroides caccae ATCC 43185] gi|149131030|gb|EDM22236.1| hypothetical protein BACCAC_00614 [Bacteroides caccae ATCC 43185] Length = 236 Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 56/161 (34%), Positives = 80/161 (49%), Gaps = 16/161 (9%) Query: 101 ILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW-- 157 ILD+GTGTG V L L + S P V ++I A E AK N V + ++ + +Q+D+ Sbjct: 41 ILDVGTGTGLVALMLAQRSLPNTNIVALEIDEAAAEQAKENIVRSPWKKQIEVVQTDFRK 100 Query: 158 FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217 + S E FDVIVSNPPY VD LG D + + D L+ Y + +GV+ L Sbjct: 101 YQSPEK-FDVIVSNPPY----FVDSLGCP----DQQRNSARHNDSLT-YEELLEGVTGLL 150 Query: 218 NKDGLCSVEIGYNQKVDVVRIFESRKLFLV---NAFKDYGG 255 ++G ++ I + V I +KL V N GG Sbjct: 151 TENGTFTIVIPMDVADRVKMIASEKKLQAVRQLNVITKPGG 191 >gi|118096741|ref|XP_414261.2| PREDICTED: similar to HEMK homolog [Gallus gallus] Length = 352 Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 66/240 (27%), Positives = 106/240 (44%), Gaps = 29/240 (12%) Query: 44 RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLV--------------DSALAFS 89 + L+ + +LG DF N+ L + F PRPETE L+ +SA + + Sbjct: 112 KRLERMPVQYVLGEWDFQNLTLKMRPPVFIPRPETEDLISLVVEEESRKCEVKNSAFSVA 171 Query: 90 LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 +P IL++G G+GA+ L+LL + P + + VD A+++ + N + R Sbjct: 172 VPP------PVILEIGCGSGAIALSLLCKIPQSRVLAVDKEEAAVDLTRENVHRLQLQGR 225 Query: 150 FDTLQSD-WFSSVE-----GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203 L + + S + G D IVSNPPY+ + L E+ ++ +LDGG DG+ Sbjct: 226 IHVLHHNVSYGSAKHLLPWGPMDFIVSNPPYVFHEDMASLDAEILRYEDLDALDGGDDGM 285 Query: 204 SHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK-LFLV--NAFKDYGGNDRVL 260 +TI L G +E+ V ++ LFL KD+ G R L Sbjct: 286 RVIKTILTLAPTLLKDSGSVFLEVDPRHPAMVEDWLTAQPDLFLTLRAVHKDFCGKPRFL 345 >gi|224586377|ref|YP_002640176.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|224470905|gb|ACN48735.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] Length = 342 Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 37/122 (30%), Positives = 59/122 (48%), Gaps = 23/122 (18%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LD+G G G + AL SP + D+S A+E +++ NG+ + S+ FS Sbjct: 199 KVLDVGCGAGVLSAALASHSPKARLTLCDVSAPAVEASRATLAANGLEG--EVFASNVFS 256 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 V+G FD+I+SNPP+ + + + SLD +T+ G RHLN Sbjct: 257 EVKGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 295 Query: 220 DG 221 G Sbjct: 296 GG 297 >gi|116619370|ref|YP_821526.1| methyltransferase small [Candidatus Solibacter usitatus Ellin6076] gi|116222532|gb|ABJ81241.1| methyltransferase small [Candidatus Solibacter usitatus Ellin6076] Length = 488 Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 45/141 (31%), Positives = 70/141 (49%), Gaps = 16/141 (11%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 +++ +AF L + + +LDLGTG+G L K + G DI+ +++ A+ N Sbjct: 129 IENTVAF-LATLPETPCTALLDLGTGSGIAALDGAKYAS--HTWGTDIAARSVHFAEFNR 185 Query: 142 VTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200 NG+ + LQ D ++ VEGL FD IV++PPY+ + + I DGG Sbjct: 186 RLNGI-QNATMLQGDLYAPVEGLTFDRIVAHPPYVPA-----------RQNAMIFRDGGE 233 Query: 201 DGLSHYRTIADGVSRHLNKDG 221 DG R I +G+ R L G Sbjct: 234 DGEQILRGIVEGLPRFLRPGG 254 >gi|295395537|ref|ZP_06805731.1| methylase of polypeptide chain release factors [Brevibacterium mcbrellneri ATCC 49030] gi|294971556|gb|EFG47437.1| methylase of polypeptide chain release factors [Brevibacterium mcbrellneri ATCC 49030] Length = 534 Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 46/151 (30%), Positives = 66/151 (43%), Gaps = 15/151 (9%) Query: 95 KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154 + V LDLGTG G +AL + + DIS +AL ++NA NG + +T + Sbjct: 169 RTPVHTALDLGTGCGIQAIALARHCDHV--IATDISARALAFTRANATLNG-AHNIETRE 225 Query: 155 SDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214 F FD+IVSNPP++ + LE R DGG G RT+ + Sbjct: 226 GSLFEPTPEQFDLIVSNPPFVITPQGHTATLEYR--------DGGHTGDQLMRTLLAQLP 277 Query: 215 RHLNKDG----LCSVEIGYNQKVDVVRIFES 241 HL G L + EI + D + E+ Sbjct: 278 NHLTTSGTACLLGNWEITHATSEDPTQDPET 308 >gi|291276431|ref|YP_003516203.1| putative S-adenosylmethionine-dependent methyltransferase [Helicobacter mustelae 12198] gi|290963625|emb|CBG39457.1| putative S-adenosylmethionine-dependent methyltransferase [Helicobacter mustelae 12198] Length = 281 Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 56/215 (26%), Positives = 95/215 (44%), Gaps = 18/215 (8%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110 I I FY + PRPETELL+D A+ F L ++ V I ++G G+G Sbjct: 70 IEYITKEASFYEHIFYVDHRVLIPRPETELLID-AVDFLL---QEHGVKNIAEVGVGSGI 125 Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAV-----TNGVSERFDTLQSDWFSSVEG-L 164 + + L + + DIS AL++A N N + + + ++ V+ Sbjct: 126 ISITLALKYKDISLIATDISKDALDVATCNIAHFHTQENNLKNKIKLVHTNLLDGVKKDS 185 Query: 165 FDVIVSNPPYIESVIVDCLGLEVRD-FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223 D++++NPPY I LE +P +L GG G + + S NK Sbjct: 186 LDLLIANPPY----IARSYPLEPHVLLEPHCALFGGERGDEILLELIEVAST--NKIKFL 239 Query: 224 SVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258 + E+G++QK + + + + + ++DY G DR Sbjct: 240 ACEMGFDQKESLQEALK-KAGYRADFYQDYAGLDR 273 >gi|213029544|ref|ZP_03343991.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 229 Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 37/122 (30%), Positives = 59/122 (48%), Gaps = 23/122 (18%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LD+G G G + AL SP + D+S A+E +++ NG+ + S+ FS Sbjct: 86 KVLDVGCGAGVLSAALASHSPKVRLTLCDVSAPAVEASRATLAANGLEG--EVFASNVFS 143 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 V+G FD+I+SNPP+ + + + SLD +T+ G RHLN Sbjct: 144 EVKGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 182 Query: 220 DG 221 G Sbjct: 183 GG 184 >gi|188581630|ref|YP_001925075.1| methyltransferase small [Methylobacterium populi BJ001] gi|179345128|gb|ACB80540.1| methyltransferase small [Methylobacterium populi BJ001] Length = 341 Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 44/125 (35%), Positives = 64/125 (51%), Gaps = 7/125 (5%) Query: 67 LSSDTFEPRPETELLVDSALAFSLPRIEKRDVV--RILDLGTGTGAVCLALLKESPFFKG 124 L++D+ P+T ++ LA R K R++D+G G+GA + + K P + Sbjct: 126 LAADSVFFGPDTMRFAEAVLAHLEERARKGRPAPRRVVDIGCGSGATGILVAKRLPEAEV 185 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184 V VDI+ AL A+ NA GV + SD VEG FD+IVSNPP+ +VD G Sbjct: 186 VLVDINPAALRAARINARLAGVPN-VHPVHSDMLQGVEGAFDLIVSNPPF----MVDAGG 240 Query: 185 LEVRD 189 R+ Sbjct: 241 RAYRN 245 >gi|319948467|ref|ZP_08022603.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Dietzia cinnamea P4] gi|319437887|gb|EFV92871.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Dietzia cinnamea P4] Length = 322 Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 45/150 (30%), Positives = 67/150 (44%), Gaps = 10/150 (6%) Query: 54 ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113 +LG + L + F PRPETELLV+ LA +LP ++DL G+G + L Sbjct: 77 LLGRAASGRLDLAVGPGVFIPRPETELLVEWTLA-ALPAPTPEPGPVVVDLCAGSGTIAL 135 Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS-------ERFDTLQSDWFSSVEGLFD 166 + P + V++ ALE + NA + R D + + + G Sbjct: 136 EIAHARPDARVHAVELHDAALEWLRRNAHERAAAGDTPVEVHRADATDIETLAHLRGRVA 195 Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISL 196 +VSNPPYI + D L EV +P +L Sbjct: 196 AVVSNPPYIP--VTDDLPAEVLAHEPATAL 223 >gi|256810548|ref|YP_003127917.1| methylase [Methanocaldococcus fervens AG86] gi|256793748|gb|ACV24417.1| methylase [Methanocaldococcus fervens AG86] Length = 199 Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 50/164 (30%), Positives = 86/164 (52%), Gaps = 15/164 (9%) Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 ++L L + +EP ++ LL+ + L ++ ++V L++G GTG + +A K+ Sbjct: 8 IKLKLHPEVYEPAEDSILLLKN-----LVDVKGKEV---LEIGVGTGLISIACAKKGAK- 58 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSER-FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181 K VGVDI+ A+++A+ NA N ++ ++SD F +V G FDVI+ NPPY+ + D Sbjct: 59 KVVGVDINPYAVKLAEENAKLNNLNNADISFIRSDLFENVSGTFDVILFNPPYLPTSEDD 118 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225 + D + DGG DG D + +L K G+ + Sbjct: 119 LI-----DSYINYAFDGGKDGREILDRFIDNLPNYLKKGGVVQI 157 >gi|149239086|ref|XP_001525419.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL YB-4239] gi|146450912|gb|EDK45168.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL YB-4239] Length = 308 Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 65/249 (26%), Positives = 107/249 (42%), Gaps = 32/249 (12%) Query: 41 AIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR 100 AI R + + IL + F + + PR ETE + LA L + R ++ Sbjct: 51 AINRRARLVPLQYILKSQPFGGLSIACREGVLVPRWETEEWC-TRLAELLEKNNAR-TLK 108 Query: 101 ILDLGTGTGAVCLALLKESPFF----KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 I+D TGTG + L L + +F + +G D+S +ALE+AK N T + + Q+ Sbjct: 109 IVDACTGTGCIPLLLNHQIKYFADKFEAIGFDVSIEALELAKKNLKTYISNHDMSSTQTK 168 Query: 157 W---------------FSSVEGLFDVIVSNPPYI------ESVIVDCLGLEVRDFDPRIS 195 FS + G D++ +NPPYI +S + + VR ++PR++ Sbjct: 169 ISFQSANVFDPNLCKNFSEI-GDIDIVTANPPYIPAEDYLKSTQRNGVERSVRLYEPRLA 227 Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGG 255 L G ++ Y + + V L+ G E+GY + VR L+ V D Sbjct: 228 LVGDVE---FYTQLINNVVLPLSAKGFV-FELGYVHQACAVRQALDSNLWGVGTMNDSAT 283 Query: 256 NDRVLLFCR 264 R ++ R Sbjct: 284 KLRCVVGWR 292 >gi|163851886|ref|YP_001639929.1| methyltransferase small [Methylobacterium extorquens PA1] gi|163663491|gb|ABY30858.1| methyltransferase small [Methylobacterium extorquens PA1] Length = 340 Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 33/76 (43%), Positives = 46/76 (60%), Gaps = 1/76 (1%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+ D+G G+GA + + K P + V VDI+ AL A+ NA GV + SD S Sbjct: 161 RVADIGCGSGAAGILVAKRLPEAEVVLVDINPAALRAARINARLAGVGN-VRPVHSDMLS 219 Query: 160 SVEGLFDVIVSNPPYI 175 +VEG FD+IVSNPP++ Sbjct: 220 NVEGSFDLIVSNPPFM 235 >gi|307354001|ref|YP_003895052.1| methylase [Methanoplanus petrolearius DSM 11571] gi|307157234|gb|ADN36614.1| methylase [Methanoplanus petrolearius DSM 11571] Length = 190 Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 47/170 (27%), Positives = 80/170 (47%), Gaps = 29/170 (17%) Query: 72 FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131 + P +T LL ++ + E + R++++GTG+G + + + S + + DI+ Sbjct: 11 YRPEEDTFLLSEAVMH------EIKSTDRVIEIGTGSGFISSGIRERSE--QVIATDINP 62 Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYI----ESVIVDCLGLEV 187 A AK N V + +++D FS + G FD+++ NPPY+ E I D L Sbjct: 63 YACTTAKKNGV--------EVVRTDLFSGICGTFDLVIFNPPYLPTKAEERIDDWL---- 110 Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237 +LDGG DG + + A+ + L+K G C + I D VR Sbjct: 111 -----EYALDGGEDGRTTIQKFAEQLGSVLSKTGRCLILISSLTGTDEVR 155 >gi|322388055|ref|ZP_08061661.1| methyltransferase domain protein [Streptococcus infantis ATCC 700779] gi|321141076|gb|EFX36575.1| methyltransferase domain protein [Streptococcus infantis ATCC 700779] Length = 196 Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 31/74 (41%), Positives = 47/74 (63%), Gaps = 3/74 (4%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 +ILD+G G G + L+L+K + + VDI+ +AL++A+ NAV N V QS+ + Sbjct: 60 KILDVGCGYGPIGLSLVK-AYGAQATMVDINNRALDLAQQNAVKNNVQATI--FQSNIYE 116 Query: 160 SVEGLFDVIVSNPP 173 VEG FD ++SNPP Sbjct: 117 QVEGQFDHVISNPP 130 >gi|298484042|ref|ZP_07002211.1| SAM-dependent methyltransferase [Bacteroides sp. D22] gi|298269823|gb|EFI11415.1| SAM-dependent methyltransferase [Bacteroides sp. D22] Length = 236 Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 57/162 (35%), Positives = 79/162 (48%), Gaps = 16/162 (9%) Query: 100 RILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW- 157 RILD+GTGTG V L L + S P K V ++I A A+ N + ER + +Q+D+ Sbjct: 40 RILDIGTGTGLVALMLAQRSLPDAKIVALEIDEAAAGQARENVARSPWQERIEVVQADFK 99 Query: 158 -FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216 + S + FDVIVSNPPY VD L D + + D L+ Y + +G +R Sbjct: 100 KYRSSDK-FDVIVSNPPY----FVDSLECP----DRQRAAARHNDSLT-YEELLEGGNRL 149 Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRKLFLV---NAFKDYGG 255 L DGL +V I + V I KL+ + N GG Sbjct: 150 LAADGLFTVVIPTDVVDRVKAIASMNKLYAIRQLNVITKPGG 191 >gi|213859939|ref|ZP_03385643.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica subsp. enterica serovar Typhi str. M223] Length = 245 Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 37/122 (30%), Positives = 59/122 (48%), Gaps = 23/122 (18%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LD+G G G + AL SP + D+S A+E +++ NG+ + S+ FS Sbjct: 102 KVLDVGCGAGVLSAALASHSPKVRLTLCDVSAPAVEASRATLAANGLEG--EVFASNVFS 159 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 V+G FD+I+SNPP+ + + + SLD +T+ G RHLN Sbjct: 160 EVKGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 198 Query: 220 DG 221 G Sbjct: 199 GG 200 >gi|213622584|ref|ZP_03375367.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] Length = 277 Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 37/122 (30%), Positives = 59/122 (48%), Gaps = 23/122 (18%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LD+G G G + AL SP + D+S A+E +++ NG+ + S+ FS Sbjct: 134 KVLDVGCGAGVLSAALASHSPKVRLTLCDVSAPAVEASRATLAANGLEG--EVFASNVFS 191 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 V+G FD+I+SNPP+ + + + SLD +T+ G RHLN Sbjct: 192 EVKGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 230 Query: 220 DG 221 G Sbjct: 231 GG 232 >gi|322392143|ref|ZP_08065605.1| methyltransferase domain protein [Streptococcus peroris ATCC 700780] gi|321145043|gb|EFX40442.1| methyltransferase domain protein [Streptococcus peroris ATCC 700780] Length = 196 Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 31/74 (41%), Positives = 47/74 (63%), Gaps = 3/74 (4%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 +ILD+G G G + L+L+K + + VDI+ +AL++A+ NAV N V QS+ + Sbjct: 60 KILDVGCGYGPIGLSLVK-AYGVQATMVDINNRALDLAQQNAVKNNVQATI--FQSNIYD 116 Query: 160 SVEGLFDVIVSNPP 173 VEG FD ++SNPP Sbjct: 117 QVEGQFDHVISNPP 130 >gi|157150082|ref|YP_001450367.1| methyltransferase domain-containing protein [Streptococcus gordonii str. Challis substr. CH1] gi|157074876|gb|ABV09559.1| methyltransferase domain protein [Streptococcus gordonii str. Challis substr. CH1] Length = 197 Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 34/73 (46%), Positives = 46/73 (63%), Gaps = 3/73 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 ILDLG G G + L L+K S K VDI+ +AL++A+ NA N VS + QS+ + Sbjct: 61 ILDLGCGYGPLGLTLVK-SQAVKATLVDINLRALDLARKNAELNKVSA--EIFQSNVYDQ 117 Query: 161 VEGLFDVIVSNPP 173 V G+FD I+SNPP Sbjct: 118 VTGIFDHIISNPP 130 >gi|254282238|ref|ZP_04957206.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [gamma proteobacterium NOR51-B] gi|219678441|gb|EED34790.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [gamma proteobacterium NOR51-B] Length = 301 Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 44/159 (27%), Positives = 84/159 (52%), Gaps = 7/159 (4%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 RI+D+ G G++ + E P + + +DI KAL +A+ N +G+ + T+++D Sbjct: 124 RIVDVCCGGGSLGILAATEFPGAEVLCLDIDEKALALAEENIARHGLQGQISTVRADLLG 183 Query: 160 SVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSH-YRTIADGVSRHL 217 + D+I++NPPY+++ + L E ++PR++L+ G DGL +R + SR L Sbjct: 184 PLSPDSVDIILANPPYVDAQDMADLPAEY-SWEPRLALEAGDDGLDLVHRLLVQAASR-L 241 Query: 218 NKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGN 256 + G +E+G N + R F + + ++GG+ Sbjct: 242 RESGYLFLEVG-NSWPAMERAFPRFEFLWLE--PEWGGH 277 >gi|307243788|ref|ZP_07525920.1| methyltransferase small domain protein [Peptostreptococcus stomatis DSM 17678] gi|306492842|gb|EFM64863.1| methyltransferase small domain protein [Peptostreptococcus stomatis DSM 17678] Length = 249 Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 32/100 (32%), Positives = 57/100 (57%), Gaps = 6/100 (6%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 +D+ L + R++K +++DLGTGTG + + L +S K +G++I + E+A + Sbjct: 32 IDAVLLANFTRVKKN--AKLVDLGTGTGIIPILLAGKSSASKIIGIEIQDEVAEMASRSV 89 Query: 142 VTNGVSERFDTLQSDWFSSV----EGLFDVIVSNPPYIES 177 N + +R + L D +V +G D++VSNPPY+ S Sbjct: 90 KLNQLEDRVEILNMDMKDAVGVLGKGQMDLVVSNPPYMHS 129 >gi|116617402|ref|YP_817773.1| 16S RNA G1207 methylase RsmC [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|116096249|gb|ABJ61400.1| 16S rRNA m(2)G 1207 methyltransferase [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 211 Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 33/97 (34%), Positives = 59/97 (60%), Gaps = 9/97 (9%) Query: 78 TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG-VDISCKALEI 136 T ++D+ S+P + ++LDLGTG G V L + K + + V VD++ +AL++ Sbjct: 52 TRTMLDALEKTSIP------IGKVLDLGTGYGPVGLTVAK--AYQRHVDMVDVNERALDL 103 Query: 137 AKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173 A+ NA NGV++R + +SD ++S+ + +I+ NPP Sbjct: 104 ARKNAQQNGVAQRVNIFKSDVYASISDKYALILVNPP 140 >gi|298252616|ref|ZP_06976410.1| methylase of polypeptide chain release factors [Gardnerella vaginalis 5-1] gi|297532980|gb|EFH71864.1| methylase of polypeptide chain release factors [Gardnerella vaginalis 5-1] Length = 304 Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 51/176 (28%), Positives = 86/176 (48%), Gaps = 26/176 (14%) Query: 49 ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAF-SLPRIEKRDVVRILDLGTG 107 E + I+G F + L + F PRPETE++V++ L + I K VV DL G Sbjct: 73 EPLQHIVGRAPFRYLDLQVGKGVFVPRPETEIVVEAGLDWLRESGISKPTVV---DLCAG 129 Query: 108 TGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG-------VSERFDTLQSDWFSS 160 +GA+ L++ E + V+ S +A + + N + R+ + +D S Sbjct: 130 SGAIGLSIAAEVADAQVWAVEKSPEAFQYLQKNFEETAKKWENIQIFSRYHAVLADATKS 189 Query: 161 -----------VEGLFDVIVSNPPYI-ESVIVDCLGLEVRDFDPRISLDGG-IDGL 203 + G D++++NPPY+ ES + + +EVR++DP ++L GG DGL Sbjct: 190 HISDCTPELHAICGKVDLVITNPPYVPESQVPE--QVEVREYDPPLALYGGSADGL 243 >gi|91775778|ref|YP_545534.1| methyltransferase small [Methylobacillus flagellatus KT] gi|91709765|gb|ABE49693.1| methyltransferase small [Methylobacillus flagellatus KT] Length = 321 Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 33/91 (36%), Positives = 52/91 (57%), Gaps = 5/91 (5%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 V R +D+G+G+GA + L + P + GVDI+ +AL +A N + G+ L SD Sbjct: 142 VYRAVDIGSGSGAGAIMLAQRLPQAEVYGVDINDQALALAAINGIAAGLFN-LHWLHSDL 200 Query: 158 FSSVEGLFDVIVSNPPYIESVIVDCLGLEVR 188 +++G FD+I+SNPP+ +VD G R Sbjct: 201 LQALDGEFDLIISNPPF----LVDAAGRAYR 227 >gi|229070918|ref|ZP_04204146.1| Modification methylase, HemK [Bacillus cereus F65185] gi|228712308|gb|EEL64255.1| Modification methylase, HemK [Bacillus cereus F65185] Length = 260 Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 58/195 (29%), Positives = 89/195 (45%), Gaps = 8/195 (4%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110 + ++G+ +F +R+ + F PR TE LV A A + D+V +DL G+GA Sbjct: 51 LEYVVGYAEFCGLRIEVDRGVFVPRQRTEFLVRQAEAL----LCFGDIV--VDLCCGSGA 104 Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFSSVEGLFDVIV 169 V +AL + VDI A+ A N VTN F+ L +++G + +V Sbjct: 105 VGVALAAALGRIELYSVDIDPVAVRCASRN-VTNFGGHVFEGDLYKALPHALKGHVNTLV 163 Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY 229 +N PY+ + + L E R +P+++LDGG DGL R +A L G +E Sbjct: 164 ANVPYVPTETIKLLPQEARLHEPKMALDGGEDGLDIQRRVAKEAFLWLASGGHLLIETSE 223 Query: 230 NQKVDVVRIFESRKL 244 Q IF L Sbjct: 224 MQATQTFEIFAGAGL 238 >gi|331645067|ref|ZP_08346178.1| ribosomal RNA small subunit methyltransferase C (rRNA(guanine-N(2)-)-methyltransferase) (16S rRNA m2G1207methyltransferase) [Escherichia coli M605] gi|330909815|gb|EGH38325.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli AA86] gi|331045824|gb|EGI17943.1| ribosomal RNA small subunit methyltransferase C (rRNA(guanine-N(2)-)-methyltransferase) (16S rRNA m2G1207methyltransferase) [Escherichia coli M605] Length = 343 Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 36/122 (29%), Positives = 59/122 (48%), Gaps = 23/122 (18%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LD+G G G + +A + SP + D+S A+E +++ N V + S+ FS Sbjct: 199 KVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANSVEG--EVFASNVFS 256 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 V+G FD+I+SNPP+ + + + SLD +T+ G RHLN Sbjct: 257 EVKGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 295 Query: 220 DG 221 G Sbjct: 296 GG 297 >gi|228953746|ref|ZP_04115786.1| Modification methylase, HemK [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|229080682|ref|ZP_04213201.1| Modification methylase, HemK [Bacillus cereus Rock4-2] gi|228702620|gb|EEL55087.1| Modification methylase, HemK [Bacillus cereus Rock4-2] gi|228805980|gb|EEM52559.1| Modification methylase, HemK [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 260 Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 58/195 (29%), Positives = 89/195 (45%), Gaps = 8/195 (4%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110 + ++G+ +F +R+ + F PR TE LV A A + D+V +DL G+GA Sbjct: 51 LEYVVGYAEFCGLRIEVDRGVFVPRQRTEFLVRQAEAL----LCFGDIV--VDLCCGSGA 104 Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFSSVEGLFDVIV 169 V +AL + VDI A+ A N VTN F+ L +++G + +V Sbjct: 105 VGVALAAALGRIELYSVDIDPVAVRCASRN-VTNFGGHVFEGDLYKALPHALKGHVNTLV 163 Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY 229 +N PY+ + + L E R +P+++LDGG DGL R +A L G +E Sbjct: 164 ANVPYVPTETIKLLPQEARLHEPKMALDGGEDGLDIQRRVAKEAFLWLASGGHLLIETSE 223 Query: 230 NQKVDVVRIFESRKL 244 Q IF L Sbjct: 224 MQATQTFEIFAGAGL 238 >gi|218703063|ref|YP_002410692.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli IAI39] gi|226712941|sp|B7NVD9|RSMC_ECO7I RecName: Full=Ribosomal RNA small subunit methyltransferase C; AltName: Full=16S rRNA m2G1207 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rsmC gi|218373049|emb|CAR20939.1| 16S RNA m2G1207 methylase [Escherichia coli IAI39] Length = 343 Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 36/122 (29%), Positives = 59/122 (48%), Gaps = 23/122 (18%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LD+G G G + +A + SP + D+S A+E +++ N V + S+ FS Sbjct: 199 KVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANSVEG--EVFASNVFS 256 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 V+G FD+I+SNPP+ + + + SLD +T+ G RHLN Sbjct: 257 EVKGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 295 Query: 220 DG 221 G Sbjct: 296 GG 297 >gi|320195321|gb|EFW69949.1| Ribosomal RNA small subunit methyltransferase C [Escherichia coli WV_060327] Length = 343 Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 36/122 (29%), Positives = 59/122 (48%), Gaps = 23/122 (18%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LD+G G G + +A + SP + D+S A+E +++ N V + S+ FS Sbjct: 199 KVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANSVEG--EVFASNVFS 256 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 V+G FD+I+SNPP+ + + + SLD +T+ G RHLN Sbjct: 257 EVKGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 295 Query: 220 DG 221 G Sbjct: 296 GG 297 >gi|317495084|ref|ZP_07953455.1| methyltransferase small domain-containing protein [Gemella moribillum M424] gi|316914791|gb|EFV36266.1| methyltransferase small domain-containing protein [Gemella moribillum M424] Length = 198 Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 23/79 (29%), Positives = 49/79 (62%) Query: 95 KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154 +++V + D+G G G + + L K++P + VD++ ++L + K N N + + + ++ Sbjct: 55 QKEVANVADIGCGYGVISIVLAKQNPGYSFTMVDVNNRSLVLTKKNIELNRIENKVEIIE 114 Query: 155 SDWFSSVEGLFDVIVSNPP 173 S F +V+G FD++++NPP Sbjct: 115 SSSFDNVKGDFDIVLTNPP 133 >gi|227431251|ref|ZP_03913305.1| methyltransferase [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] gi|227353013|gb|EEJ43185.1| methyltransferase [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] Length = 211 Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 33/97 (34%), Positives = 59/97 (60%), Gaps = 9/97 (9%) Query: 78 TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG-VDISCKALEI 136 T ++D+ S+P + ++LDLGTG G V L + K + + V VD++ +AL++ Sbjct: 52 TRTMLDALEKTSIP------IGKVLDLGTGYGPVGLTVAK--AYQRHVDMVDVNERALDL 103 Query: 137 AKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173 A+ NA NGV++R + +SD ++S+ + +I+ NPP Sbjct: 104 ARKNAQQNGVAQRVNIFKSDVYASISDKYALILVNPP 140 >gi|26251256|ref|NP_757296.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli CFT073] gi|227885143|ref|ZP_04002948.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli 83972] gi|300980808|ref|ZP_07175189.1| methyltransferase small domain protein [Escherichia coli MS 45-1] gi|301048334|ref|ZP_07195364.1| methyltransferase small domain protein [Escherichia coli MS 185-1] gi|331661001|ref|ZP_08361933.1| ribosomal RNA small subunit methyltransferase C (rRNA(guanine-N(2)-)-methyltransferase) (16S rRNA m2G1207methyltransferase) [Escherichia coli TA206] gi|81472610|sp|Q8FA64|RSMC_ECOL6 RecName: Full=Ribosomal RNA small subunit methyltransferase C; AltName: Full=16S rRNA m2G1207 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rsmC gi|26111689|gb|AAN83870.1|AE016772_48 Ribosomal RNA small subunit methyltransferase C [Escherichia coli CFT073] gi|227837972|gb|EEJ48438.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli 83972] gi|300299794|gb|EFJ56179.1| methyltransferase small domain protein [Escherichia coli MS 185-1] gi|300409125|gb|EFJ92663.1| methyltransferase small domain protein [Escherichia coli MS 45-1] gi|307556603|gb|ADN49378.1| 16S RNA G1207 methylase RsmC [Escherichia coli ABU 83972] gi|315293340|gb|EFU52692.1| methyltransferase small domain protein [Escherichia coli MS 153-1] gi|315298365|gb|EFU57620.1| methyltransferase small domain protein [Escherichia coli MS 16-3] gi|331052043|gb|EGI24082.1| ribosomal RNA small subunit methyltransferase C (rRNA(guanine-N(2)-)-methyltransferase) (16S rRNA m2G1207methyltransferase) [Escherichia coli TA206] Length = 343 Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 36/122 (29%), Positives = 59/122 (48%), Gaps = 23/122 (18%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LD+G G G + +A + SP + D+S A+E +++ N V + S+ FS Sbjct: 199 KVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANSVEG--EVFASNVFS 256 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 V+G FD+I+SNPP+ + + + SLD +T+ G RHLN Sbjct: 257 EVKGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 295 Query: 220 DG 221 G Sbjct: 296 GG 297 >gi|282880314|ref|ZP_06289028.1| methyltransferase small domain protein [Prevotella timonensis CRIS 5C-B1] gi|281305816|gb|EFA97862.1| methyltransferase small domain protein [Prevotella timonensis CRIS 5C-B1] Length = 233 Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 47/154 (30%), Positives = 73/154 (47%), Gaps = 12/154 (7%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF--DTLQSDW 157 RILD+GTGTG + L + + P + V +DI C+A + A N T+ ++R D + Sbjct: 38 RILDVGTGTGLIALMMAQRYPQARIVAIDIDCEACKQAAENVATSPFADRIAVDNVPLQQ 97 Query: 158 FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217 + E FD IV+NPPY +D L R+ D + +L L Y+ + GV L Sbjct: 98 LNDTEE-FDAIVTNPPY----FIDSL----RNPDEQKALARHACSLP-YKDLCKGVQLLL 147 Query: 218 NKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK 251 + G+ SV + + V L+L +K Sbjct: 148 SSRGIFSVVLPTDNMEKFVAEAAFAGLYLYKQYK 181 >gi|255721327|ref|XP_002545598.1| conserved hypothetical protein [Candida tropicalis MYA-3404] gi|240136087|gb|EER35640.1| conserved hypothetical protein [Candida tropicalis MYA-3404] Length = 308 Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 67/247 (27%), Positives = 108/247 (43%), Gaps = 26/247 (10%) Query: 36 FFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEK 95 + NA+++ K + IL + F + + PR ETE L +L +I K Sbjct: 46 YEWANAVLQRQKLVPLQYILKSQPFGELSIICREGVLIPRWETEEWC-IKLIHALKQIPK 104 Query: 96 RDVVRILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIA-------KSNAVTNGV 146 +D + ILD+ TGTG + L + E + G D+S KA E+A K N V Sbjct: 105 QDELSILDVCTGTGCIPLLMAHELREYAPQIHGFDVSGKAYELAIENLEAYKKKYPHNKV 164 Query: 147 SERF---DTLQSDWFSSVE-GLFDVIVSNPPYI------ESVIVDCLGLEVRDFDPRISL 196 + + D ++ S + D+I SNPPYI S D + VR ++P+++L Sbjct: 165 TLNYHLGDVFDAEIISKLSIPRIDLITSNPPYIPMEDYVRSARQDGVEKSVRLYEPKLAL 224 Query: 197 DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL--FLVNAFKDYG 254 G DG +Y + + V + + + E+GY + D V + L + V KD Sbjct: 225 VG--DGEFYYALLQNIVIQSAAEGFI--FEVGYKDQADFVNTEVQKNLNSWKVGIMKDGA 280 Query: 255 GNDRVLL 261 R +L Sbjct: 281 SKVRCVL 287 >gi|330961454|gb|EGH61714.1| hypothetical protein PMA4326_23191 [Pseudomonas syringae pv. maculicola str. ES4326] Length = 314 Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 32/79 (40%), Positives = 45/79 (56%), Gaps = 1/79 (1%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 + R +D+G GTGA L + P VDI+ KAL A++NA G+ + SD Sbjct: 135 ISRAVDIGCGTGAGGLLIAVACPGAHVYAVDINPKALHFAETNAAVAGL-HNVECCPSDI 193 Query: 158 FSSVEGLFDVIVSNPPYIE 176 S V G FD+IV+NPPY++ Sbjct: 194 LSGVTGNFDLIVANPPYMK 212 >gi|226713006|sp|A1S321|RSMC_SHEAM RecName: Full=Ribosomal RNA small subunit methyltransferase C; AltName: Full=16S rRNA m2G1207 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rsmC Length = 341 Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 34/97 (35%), Positives = 55/97 (56%), Gaps = 11/97 (11%) Query: 78 TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137 T LL+D+ LP++E R +LD G G G + +AL++++P + VDI+ AL Sbjct: 190 TALLLDN-----LPKLEGR----VLDFGCGAGVIAIALMQQNPGLQLECVDINAMALLSC 240 Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174 + + NG+ + SD + +GLF+ IVSNPP+ Sbjct: 241 ELSLKANGMEAK--VYASDGLAQTDGLFNAIVSNPPF 275 >gi|119773707|ref|YP_926447.1| rRNA (guanine-N(2)-)-methyltransferase [Shewanella amazonensis SB2B] gi|119766207|gb|ABL98777.1| 16S rRNA m(2)G 1207 methyltransferase [Shewanella amazonensis SB2B] Length = 320 Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 34/97 (35%), Positives = 55/97 (56%), Gaps = 11/97 (11%) Query: 78 TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137 T LL+D+ LP++E R +LD G G G + +AL++++P + VDI+ AL Sbjct: 169 TALLLDN-----LPKLEGR----VLDFGCGAGVIAIALMQQNPGLQLECVDINAMALLSC 219 Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174 + + NG+ + SD + +GLF+ IVSNPP+ Sbjct: 220 ELSLKANGMEAK--VYASDGLAQTDGLFNAIVSNPPF 254 >gi|260912922|ref|ZP_05919407.1| ribosomal RNA small subunit methyltransferase C [Pasteurella dagmatis ATCC 43325] gi|260632912|gb|EEX51078.1| ribosomal RNA small subunit methyltransferase C [Pasteurella dagmatis ATCC 43325] Length = 328 Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 33/97 (34%), Positives = 52/97 (53%), Gaps = 2/97 (2%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 +D+ L I++ ++LDLG G G + + +++P + + DI AL AK Sbjct: 173 LDAGTDLLLSTIDQSIRGKVLDLGCGAGVIGAYIKQQNPKTQVIMTDIHAMALASAKRTL 232 Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESV 178 N + D L SD FS +EG FD+I+SNPP+ + V Sbjct: 233 AENKLEA--DVLASDVFSHIEGKFDLIISNPPFHDGV 267 >gi|213024819|ref|ZP_03339266.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 120 Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 35/104 (33%), Positives = 56/104 (53%), Gaps = 2/104 (1%) Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLG 184 VDIS AL +A+ N +G+ ++SD F + + +D+IV+NPPY+++ + L Sbjct: 4 AVDISPDALAVAEHNIEEHGLIHHVTPIRSDLFRDLPKVQYDLIVTNPPYVDAEDMSDLP 63 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228 E R +P + L G DGL R I +L+ DG+ E+G Sbjct: 64 NEYR-HEPELGLASGTDGLKLTRRILGNAPDYLSDDGVLICEVG 106 >gi|218507715|ref|ZP_03505593.1| protoporphyrinogen oxidase (methyltransferase) protein [Rhizobium etli Brasil 5] Length = 100 Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 29/69 (42%), Positives = 42/69 (60%), Gaps = 3/69 (4%) Query: 14 VTGL---SSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70 V GL SS +++ + Q ++ A+ R L HE +HRILG R+FY + L LS++ Sbjct: 32 VAGLLKQSSTELLTRSAEKISPDQIAMISKALERRLGHEPVHRILGEREFYGLPLQLSAE 91 Query: 71 TFEPRPETE 79 T EPRP+TE Sbjct: 92 TLEPRPDTE 100 >gi|161504897|ref|YP_001572009.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|226712971|sp|A9MRB9|RSMC_SALAR RecName: Full=Ribosomal RNA small subunit methyltransferase C; AltName: Full=16S rRNA m2G1207 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rsmC gi|160866244|gb|ABX22867.1| hypothetical protein SARI_03023 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 342 Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 37/122 (30%), Positives = 58/122 (47%), Gaps = 23/122 (18%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LD+G G G + AL SP + D+S A+E +++ NG+ D S+ FS Sbjct: 199 KVLDVGCGAGVLSAALASHSPKVRLTLCDVSAPAVEASRATLAVNGLDG--DVFASNVFS 256 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 V+G FD+I+SNPP+ + + + SLD +T+ RHLN Sbjct: 257 EVKGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRSAVRHLNS 295 Query: 220 DG 221 G Sbjct: 296 GG 297 >gi|329962821|ref|ZP_08300706.1| methyltransferase domain protein [Bacteroides fluxus YIT 12057] gi|328529378|gb|EGF56291.1| methyltransferase domain protein [Bacteroides fluxus YIT 12057] Length = 235 Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 31/79 (39%), Positives = 49/79 (62%), Gaps = 1/79 (1%) Query: 97 DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 +V R+LD+GTGTG + L L + +P K ++I A E AK+N + + ++R + L D Sbjct: 37 NVKRVLDVGTGTGLIALQLAQRNPHAKITAIEIDTVAAEQAKNNVLHSPWADRIEVLCLD 96 Query: 157 WFS-SVEGLFDVIVSNPPY 174 + + + FD+IVSNPPY Sbjct: 97 FRNYQQDDKFDLIVSNPPY 115 >gi|300933020|ref|ZP_07148276.1| putative transferase [Corynebacterium resistens DSM 45100] Length = 534 Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 35/82 (42%), Positives = 43/82 (52%), Gaps = 4/82 (4%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAK--SNAVTNGVS-ERFDTLQ 154 V ILDLG G+G + L L SP + G DIS +AL A+ GV + L Sbjct: 169 VTEILDLGCGSGVLSLLLESNSPSVRVTGTDISQRALAFARLGRAGTARGVEPNNVEWLH 228 Query: 155 SDWFSSVEG-LFDVIVSNPPYI 175 WF V G FDVIVSNPP++ Sbjct: 229 GSWFEPVRGRTFDVIVSNPPFV 250 >gi|261749389|ref|YP_003257074.1| putative protoporphyrinogen oxidase [Blattabacterium sp. (Periplaneta americana) str. BPLAN] gi|261497481|gb|ACX83931.1| putative protoporphyrinogen oxidase [Blattabacterium sp. (Periplaneta americana) str. BPLAN] Length = 296 Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 42/152 (27%), Positives = 76/152 (50%), Gaps = 9/152 (5%) Query: 47 KHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGT 106 K+ I ++G F+ + ++ F PRPETE LV + + + V++ DLGT Sbjct: 70 KNRPIQYVIGKTSFFGMDFLVNEKVFIPRPETEELVSWIIQ---NHKKNSENVQVFDLGT 126 Query: 107 GTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVS---ERFDTLQSDWFSSVE 162 G+G + + L K+ P + + VD+S ++L IA N+ + ++ D LQ+ + Sbjct: 127 GSGCIGITLKKKLPKIRHIHAVDLSSESLFIANINSKFHKEKIFFKKVDILQNLISLPIL 186 Query: 163 GLF--DVIVSNPPYIESVIVDCLGLEVRDFDP 192 + +++VSNPPYI L + ++P Sbjct: 187 KKYPVNIVVSNPPYIRISEKKLLHPNIFQYEP 218 >gi|45357617|ref|NP_987174.1| hypothetical protein MMP0054 [Methanococcus maripaludis S2] gi|45047177|emb|CAF29610.1| conserved hypothetical protein [Methanococcus maripaludis S2] Length = 202 Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 44/164 (26%), Positives = 83/164 (50%), Gaps = 15/164 (9%) Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 +++ + P ++ELL+++ L ++ + V LD+GTG+G + +K+ Sbjct: 10 IKIKTHPKVYVPAEDSELLIEN-----LVDVKNKTV---LDVGTGSGIQAINAVKQGAL- 60 Query: 123 KGVGVDISCKALEIAKSNAVTNGV-SERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181 K +G+DI+ A++ AK N+ N + S++ D F +++ FDVI+ N PY+ + + Sbjct: 61 KVIGIDINPYAVDCAKINSELNEIDSKKLFFKTGDLFKNIDEKFDVILFNAPYLPTSDEE 120 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225 L + + DGG DG D V+ +L KDG+ + Sbjct: 121 KLEKYLN-----YAFDGGKDGREVLDKFLDEVANYLKKDGIIQI 159 >gi|13508101|ref|NP_110050.1| HemK family methylase [Mycoplasma pneumoniae M129] gi|2496353|sp|P75419|Y362_MYCPN RecName: Full=Uncharacterized protein MG259 homolog gi|1674165|gb|AAB96122.1| hemk family protein [Mycoplasma pneumoniae M129] gi|301633681|gb|ADK87235.1| methyltransferase, HemK family [Mycoplasma pneumoniae FH] Length = 453 Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 40/148 (27%), Positives = 79/148 (53%), Gaps = 10/148 (6%) Query: 67 LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126 L S TF+ +P + +LA L ++ +++ +DL G+G + +AL K P G Sbjct: 79 LGSLTFKTQPGVFIPRADSLAL-LKVVKAQNLKTAVDLCCGSGTLAIALKKRFPHLNVYG 137 Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS---VEGLFDVIVSNPPYIESVIVDCL 183 D++ +AL++A NA N V ++ +++D+ ++ V D+I++NPPY+ +D Sbjct: 138 SDLNPQALQLAAQNARLNMVEVQW--IEADFLAALAQVNTPIDLIITNPPYLNESQLD-- 193 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIAD 211 + + +PR SL +G+ Y+ + + Sbjct: 194 --QTLNHEPRNSLVADGNGILFYQKLYN 219 >gi|332669378|ref|YP_004452386.1| methyltransferase small [Cellulomonas fimi ATCC 484] gi|332338416|gb|AEE44999.1| methyltransferase small [Cellulomonas fimi ATCC 484] Length = 512 Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 43/127 (33%), Positives = 63/127 (49%), Gaps = 10/127 (7%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+LDLGTG G L + + VG DIS +AL A+ NA GV++R Sbjct: 167 RVLDLGTGCGVQALHATRHAHAV--VGTDISARALAFAQLNAALAGVADRTTWRLGSMLE 224 Query: 160 SVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 V G FD++VSNPP+ ++ G +V ++ R DGG G + R + +GV L Sbjct: 225 PVAGERFDLVVSNPPF----VITPRGADVPAYEYR---DGGRAGDAIVRELVEGVGAVLE 277 Query: 219 KDGLCSV 225 G+ + Sbjct: 278 PGGVAQL 284 >gi|146422019|ref|XP_001486952.1| hypothetical protein PGUG_00329 [Meyerozyma guilliermondii ATCC 6260] Length = 323 Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 49/177 (27%), Positives = 86/177 (48%), Gaps = 18/177 (10%) Query: 39 TNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD- 97 T A R L+ + ILG + F + + + PR ETE V L +EK Sbjct: 82 TWAAKRRLRLVPLQYILGSQPFGELTILCKENVLIPRWETEEWVGHLLNI----LEKNSK 137 Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN----GVSERFDTL 153 +++++D+ TGTG + LA+ + P + G+D+S A+E+ K N GVS L Sbjct: 138 LLKVVDVCTGTGCIPLAIKHKRPQDEVCGIDVSETAIELCKENLALYSRDFGVSSTISFL 197 Query: 154 QSDWFSS-VEGLF--DVIVSNPPYI------ESVIVDCLGLEVRDFDPRISLDGGID 201 + F L+ D++ +NPPYI V ++ + V+ ++P+++L G ++ Sbjct: 198 VGNVFQKHPSSLYKVDLLTANPPYIPREEYNSPVALNGVLKSVKKYEPQLALIGDLE 254 >gi|82546721|ref|YP_410668.1| 16S ribosomal RNA m2G1207 methyltransferase [Shigella boydii Sb227] gi|123557836|sp|Q31SW8|RSMC_SHIBS RecName: Full=Ribosomal RNA small subunit methyltransferase C; AltName: Full=16S rRNA m2G1207 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rsmC gi|81248132|gb|ABB68840.1| putative enzyme [Shigella boydii Sb227] gi|332090318|gb|EGI95416.1| ribosomal RNA small subunit methyltransferase C [Shigella boydii 3594-74] Length = 343 Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 36/122 (29%), Positives = 59/122 (48%), Gaps = 23/122 (18%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LD+G G G + +A + SP + D+S A+E +++ N V + S+ FS Sbjct: 199 KVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANCVEG--EVFASNVFS 256 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 V+G FD+I+SNPP+ + + + SLD +T+ G RHLN Sbjct: 257 EVKGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 295 Query: 220 DG 221 G Sbjct: 296 GG 297 >gi|229104015|ref|ZP_04234691.1| Modification methylase, HemK [Bacillus cereus Rock3-28] gi|228679359|gb|EEL33560.1| Modification methylase, HemK [Bacillus cereus Rock3-28] Length = 260 Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 58/195 (29%), Positives = 89/195 (45%), Gaps = 8/195 (4%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110 + ++G+ +F +R+ + F PR TE LV A A + D+ I+DL G+GA Sbjct: 51 LEYVVGYAEFCGLRIEVDRGVFVPRQRTEFLVHQAEAL----LCFGDI--IVDLCCGSGA 104 Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFSSVEGLFDVIV 169 V +AL + VDI A+ A N VTN F+ L +++G + +V Sbjct: 105 VGVALAAALGRVELYSVDIDPVAVRCASRN-VTNFGGHVFEGDLYKALPHALKGHVNTLV 163 Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY 229 +N PY+ + + L E R +P+++LDGG DGL R +A L G +E Sbjct: 164 ANVPYVPTEAIKLLPQEARLHEPKMALDGGEDGLDIQRRVAKEAFLWLAPGGHLLIETSE 223 Query: 230 NQKVDVVRIFESRKL 244 Q IF L Sbjct: 224 MQANQTFEIFAGAGL 238 >gi|327405947|ref|YP_004346785.1| methyltransferase small [Fluviicola taffensis DSM 16823] gi|327321455|gb|AEA45947.1| methyltransferase small [Fluviicola taffensis DSM 16823] Length = 233 Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 39/156 (25%), Positives = 79/156 (50%), Gaps = 10/156 (6%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL-QSDWF 158 R+LD+GTGTG + L + PF + +G++IS +A+ A+ NA N + + Q+ Sbjct: 38 RLLDIGTGTGVLALMCAQRFPFQEIIGLEISEEAIIDAQINAQNNPFDTKITIVNQAIQD 97 Query: 159 SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 + FD I+SNPP+ E+ ++ + + SL + LS + + ++R L Sbjct: 98 YKPKEKFDAIISNPPFFEN--------SSKNPNDQKSLARHTESLS-FSELLQSITRLLT 148 Query: 219 KDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYG 254 +G + I + +++++ + +LF+ + +G Sbjct: 149 AEGKAWIIIPFESTENIIQLANANELFIADLITLFG 184 >gi|290558986|gb|EFD92368.1| methylase [Candidatus Parvarchaeum acidophilus ARMAN-5] gi|326422531|gb|EGD71927.1| Methylase [Candidatus Parvarchaeum acidophilus ARMAN-5_'5-way FS'] Length = 193 Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 46/157 (29%), Positives = 78/157 (49%), Gaps = 18/157 (11%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LD+ TG+G + + K + VDI+ A++ A+ N+ NG+ + ++SD FS Sbjct: 31 VLDMFTGSGIIAINAAKTA--HNVTAVDINPFAIDAARKNSKINGI-KNIKFIKSDLFSE 87 Query: 161 VEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 +E FDVI +NPPY+ G + +D+ +L+GG DG + + +HL K Sbjct: 88 LENKKFDVIYANPPYLP-------GKKAKDW-IDYALNGGKDGNEIILRLIHNLGKHLKK 139 Query: 220 DGLCSVEIGYNQKVDVV------RIFESRKLFLVNAF 250 +G+ + I + V F RKL+ +N F Sbjct: 140 EGVAFIIISSLSDTEKVYKEIRRSKFSFRKLYSINFF 176 >gi|25027861|ref|NP_737915.1| putative protoporphyrinogen oxidase HemK [Corynebacterium efficiens YS-314] gi|259506252|ref|ZP_05749154.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Corynebacterium efficiens YS-314] gi|23493144|dbj|BAC18115.1| putative protoporphyrinogen oxidase HemK [Corynebacterium efficiens YS-314] gi|259166156|gb|EEW50710.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Corynebacterium efficiens YS-314] Length = 280 Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 61/236 (25%), Positives = 88/236 (37%), Gaps = 37/236 (15%) Query: 40 NAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV 99 A+ R E + ILG + L + F PRPETE+L D +++ R D Sbjct: 56 EAVARRAAREPLQHILGRAPMGPLDLHVGPGVFVPRPETEVLAD----WAVRRGRGVDKP 111 Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV---------TNGVSERF 150 ++DL TG+GA+ + E VD S A+E+ A T GV Sbjct: 112 VVVDLCTGSGALAAYIAHEL-------VDASVTAVELDPGAATWAQRNFDEFTPGVDLVI 164 Query: 151 -DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD------GGIDGL 203 D + G D++VSNPPY+ E D DP + D G G+ Sbjct: 165 GDVTDPTLLPDLHGRVDIVVSNPPYVP---------ETGDLDPEVYRDPHMAVFSGPTGM 215 Query: 204 SHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL-VNAFKDYGGNDR 258 + + L G+ +E V + F+ V KD G DR Sbjct: 216 DVITEMIHLIHALLAPGGVVGIEHDDTTSAAVRDVVTGHGGFVDVAVLKDLTGRDR 271 >gi|262831401|sp|Q8A9H7|TRMN6_BACTN RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName: Full=tRNA m6A37 methyltransferase Length = 237 Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 47/130 (36%), Positives = 65/130 (50%), Gaps = 11/130 (8%) Query: 100 RILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW- 157 RILD+GTGTG V L L + S P V ++I A AK N + +R + ++ D+ Sbjct: 40 RILDIGTGTGLVALMLAQRSLPDANIVALEIDEAAAGQAKENVARSPWKDRIEVVKQDFL 99 Query: 158 FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217 F FDVIVSNPPY VD L D + S+ D L+ Y + GV+ L Sbjct: 100 FYQSPDKFDVIVSNPPY----FVDSLSCP----DQQRSMARHNDSLT-YEKLLKGVADLL 150 Query: 218 NKDGLCSVEI 227 K+G ++ I Sbjct: 151 KKEGTFTIVI 160 >gi|29346248|ref|NP_809751.1| putative RNA methyltransferase [Bacteroides thetaiotaomicron VPI-5482] gi|29338143|gb|AAO75945.1| putative RNA methyltransferase [Bacteroides thetaiotaomicron VPI-5482] Length = 241 Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 47/130 (36%), Positives = 65/130 (50%), Gaps = 11/130 (8%) Query: 100 RILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW- 157 RILD+GTGTG V L L + S P V ++I A AK N + +R + ++ D+ Sbjct: 44 RILDIGTGTGLVALMLAQRSLPDANIVALEIDEAAAGQAKENVARSPWKDRIEVVKQDFL 103 Query: 158 FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217 F FDVIVSNPPY VD L D + S+ D L+ Y + GV+ L Sbjct: 104 FYQSPDKFDVIVSNPPY----FVDSLSCP----DQQRSMARHNDSLT-YEKLLKGVADLL 154 Query: 218 NKDGLCSVEI 227 K+G ++ I Sbjct: 155 KKEGTFTIVI 164 >gi|187730163|ref|YP_001883033.1| 16S ribosomal RNA m2G1207 methyltransferase [Shigella boydii CDC 3083-94] gi|226712995|sp|B2TZQ2|RSMC_SHIB3 RecName: Full=Ribosomal RNA small subunit methyltransferase C; AltName: Full=16S rRNA m2G1207 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rsmC gi|187427155|gb|ACD06429.1| ribosomal RNA small subunit methyltransferase C [Shigella boydii CDC 3083-94] Length = 343 Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 36/122 (29%), Positives = 59/122 (48%), Gaps = 23/122 (18%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LD+G G G + +A + SP + D+S A+E +++ N V + S+ FS Sbjct: 199 KVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANYVEG--EVFASNVFS 256 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 V+G FD+I+SNPP+ + + + SLD +T+ G RHLN Sbjct: 257 EVKGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 295 Query: 220 DG 221 G Sbjct: 296 GG 297 >gi|322389699|ref|ZP_08063246.1| methyltransferase domain protein [Streptococcus parasanguinis ATCC 903] gi|321143538|gb|EFX38969.1| methyltransferase domain protein [Streptococcus parasanguinis ATCC 903] Length = 197 Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 34/99 (34%), Positives = 58/99 (58%), Gaps = 9/99 (9%) Query: 78 TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV---DISCKAL 134 ++ ++D L ++ ++ +LD+G G G + L+L K +GV V D++ +AL Sbjct: 38 SKKMIDYGSQVLLSTLDFQEGESVLDVGCGYGPIGLSLAKA----QGVAVTMVDVNERAL 93 Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173 ++AK NA NGV + SD + +VEG+FD ++SNPP Sbjct: 94 DLAKKNASRNGVEAQI--FSSDVYEAVEGVFDHVISNPP 130 >gi|331666196|ref|ZP_08367077.1| ribosomal RNA small subunit methyltransferase C (rRNA(guanine-N(2)-)-methyltransferase) (16S rRNA m2G1207methyltransferase) [Escherichia coli TA271] gi|331066407|gb|EGI38284.1| ribosomal RNA small subunit methyltransferase C (rRNA(guanine-N(2)-)-methyltransferase) (16S rRNA m2G1207methyltransferase) [Escherichia coli TA271] Length = 343 Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 36/122 (29%), Positives = 59/122 (48%), Gaps = 23/122 (18%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LD+G G G + +A + SP + D+S A+E +++ N V + S+ FS Sbjct: 199 KVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANCVEG--EVFASNVFS 256 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 V+G FD+I+SNPP+ + + + SLD +T+ G RHLN Sbjct: 257 EVKGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 295 Query: 220 DG 221 G Sbjct: 296 GG 297 >gi|157156493|ref|YP_001465889.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli E24377A] gi|157163818|ref|YP_001461136.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli HS] gi|209921836|ref|YP_002295920.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli SE11] gi|218556905|ref|YP_002389819.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli IAI1] gi|256020001|ref|ZP_05433866.1| 16S ribosomal RNA m2G1207 methyltransferase [Shigella sp. D9] gi|300815995|ref|ZP_07096218.1| methyltransferase small domain protein [Escherichia coli MS 107-1] gi|300824407|ref|ZP_07104520.1| methyltransferase small domain protein [Escherichia coli MS 119-7] gi|307313695|ref|ZP_07593314.1| rRNA (guanine-N(2)-)-methyltransferase [Escherichia coli W] gi|309795645|ref|ZP_07690061.1| methyltransferase small domain protein [Escherichia coli MS 145-7] gi|331680480|ref|ZP_08381139.1| ribosomal RNA small subunit methyltransferase C (rRNA(guanine-N(2)-)-methyltransferase) (16S rRNA m2G1207methyltransferase) [Escherichia coli H591] gi|332281147|ref|ZP_08393560.1| ribosomal RNA small subunit methyltransferase C [Shigella sp. D9] gi|226712937|sp|A7ZVR0|RSMC_ECO24 RecName: Full=Ribosomal RNA small subunit methyltransferase C; AltName: Full=16S rRNA m2G1207 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rsmC gi|226712943|sp|B7LXT2|RSMC_ECO8A RecName: Full=Ribosomal RNA small subunit methyltransferase C; AltName: Full=16S rRNA m2G1207 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rsmC gi|226712945|sp|A8A899|RSMC_ECOHS RecName: Full=Ribosomal RNA small subunit methyltransferase C; AltName: Full=16S rRNA m2G1207 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rsmC gi|226712949|sp|B6I2Q2|RSMC_ECOSE RecName: Full=Ribosomal RNA small subunit methyltransferase C; AltName: Full=16S rRNA m2G1207 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rsmC gi|157069498|gb|ABV08753.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli HS] gi|157078523|gb|ABV18231.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli E24377A] gi|209915095|dbj|BAG80169.1| ribosomal RNA small subunit methyltransferase [Escherichia coli SE11] gi|218363674|emb|CAR01333.1| 16S RNA m2G1207 methylase [Escherichia coli IAI1] gi|300523049|gb|EFK44118.1| methyltransferase small domain protein [Escherichia coli MS 119-7] gi|300531202|gb|EFK52264.1| methyltransferase small domain protein [Escherichia coli MS 107-1] gi|306906518|gb|EFN37031.1| rRNA (guanine-N(2)-)-methyltransferase [Escherichia coli W] gi|308120769|gb|EFO58031.1| methyltransferase small domain protein [Escherichia coli MS 145-7] gi|315063673|gb|ADT78000.1| 16S rRNA m(2)G1207 methyltransferase [Escherichia coli W] gi|320200514|gb|EFW75100.1| Ribosomal RNA small subunit methyltransferase C [Escherichia coli EC4100B] gi|323380246|gb|ADX52514.1| rRNA (guanine-N(2)-)-methyltransferase [Escherichia coli KO11] gi|323945890|gb|EGB41935.1| methyltransferase small domain-containing protein [Escherichia coli H120] gi|324016914|gb|EGB86133.1| methyltransferase small domain [Escherichia coli MS 117-3] gi|324118324|gb|EGC12218.1| methyltransferase small domain-containing protein [Escherichia coli E1167] gi|331071943|gb|EGI43279.1| ribosomal RNA small subunit methyltransferase C (rRNA(guanine-N(2)-)-methyltransferase) (16S rRNA m2G1207methyltransferase) [Escherichia coli H591] gi|332103499|gb|EGJ06845.1| ribosomal RNA small subunit methyltransferase C [Shigella sp. D9] Length = 343 Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 36/122 (29%), Positives = 59/122 (48%), Gaps = 23/122 (18%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LD+G G G + +A + SP + D+S A+E +++ N V + S+ FS Sbjct: 199 KVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANCVEG--EVFASNVFS 256 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 V+G FD+I+SNPP+ + + + SLD +T+ G RHLN Sbjct: 257 EVKGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 295 Query: 220 DG 221 G Sbjct: 296 GG 297 >gi|323181910|gb|EFZ67322.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli 1357] Length = 333 Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 36/122 (29%), Positives = 59/122 (48%), Gaps = 23/122 (18%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LD+G G G + +A + SP + D+S A+E +++ N V + S+ FS Sbjct: 189 KVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANCVEG--EVFASNVFS 246 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 V+G FD+I+SNPP+ + + + SLD +T+ G RHLN Sbjct: 247 EVKGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 285 Query: 220 DG 221 G Sbjct: 286 GG 287 >gi|227833283|ref|YP_002834990.1| putative transferase [Corynebacterium aurimucosum ATCC 700975] gi|262184268|ref|ZP_06043689.1| putative transferase [Corynebacterium aurimucosum ATCC 700975] gi|227454299|gb|ACP33052.1| putative transferase [Corynebacterium aurimucosum ATCC 700975] Length = 525 Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 48/153 (31%), Positives = 69/153 (45%), Gaps = 13/153 (8%) Query: 74 PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133 P PE L V SA L V +LDLGTG+G L L + V D+ +A Sbjct: 145 PGPEHVLGVGSASLSLLHSTPTTPVESVLDLGTGSGVQVLGQLDSAQRI--VATDVHERA 202 Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDP 192 LE+A++ +T +R + W+ VE FD IV+NPP++ V + +G RD Sbjct: 203 LELARATVLTAEAEDRVELRHGSWYEPVENERFDRIVANPPFV--VGLPEVGHVYRDSG- 259 Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225 ++LDG + + HLN G V Sbjct: 260 -LNLDGASE------LVVSQAVEHLNPGGTAHV 285 >gi|296876352|ref|ZP_06900404.1| methyltransferase [Streptococcus parasanguinis ATCC 15912] gi|296432642|gb|EFH18437.1| methyltransferase [Streptococcus parasanguinis ATCC 15912] Length = 197 Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 34/99 (34%), Positives = 58/99 (58%), Gaps = 9/99 (9%) Query: 78 TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV---DISCKAL 134 ++ ++D L ++ ++ +LD+G G G + L+L K +GV V D++ +AL Sbjct: 38 SKKMIDYGSQVLLSTLDFQEGESVLDVGCGYGPIGLSLTKA----QGVAVTMVDVNERAL 93 Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173 ++AK NA NGV + SD + +VEG+FD ++SNPP Sbjct: 94 DLAKKNASRNGVEAQI--FSSDVYEAVEGVFDHVISNPP 130 >gi|74314805|ref|YP_313224.1| 16S ribosomal RNA m2G1207 methyltransferase [Shigella sonnei Ss046] gi|260871094|ref|YP_003237496.1| 16S rRNA m2G1207 methylase RsmC [Escherichia coli O111:H- str. 11128] gi|123615410|sp|Q3YU23|RSMC_SHISS RecName: Full=Ribosomal RNA small subunit methyltransferase C; AltName: Full=16S rRNA m2G1207 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rsmC gi|73858282|gb|AAZ90989.1| putative enzyme [Shigella sonnei Ss046] gi|257767450|dbj|BAI38945.1| 16S rRNA m2G1207 methylase RsmC [Escherichia coli O111:H- str. 11128] gi|320175421|gb|EFW50523.1| Ribosomal RNA small subunit methyltransferase C [Shigella dysenteriae CDC 74-1112] gi|320183349|gb|EFW58203.1| Ribosomal RNA small subunit methyltransferase C [Shigella flexneri CDC 796-83] gi|323166178|gb|EFZ51956.1| ribosomal RNA small subunit methyltransferase C [Shigella sonnei 53G] gi|323176273|gb|EFZ61865.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli 1180] Length = 343 Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 36/122 (29%), Positives = 59/122 (48%), Gaps = 23/122 (18%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LD+G G G + +A + SP + D+S A+E +++ N V + S+ FS Sbjct: 199 KVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANCVEG--EVFASNVFS 256 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 V+G FD+I+SNPP+ + + + SLD +T+ G RHLN Sbjct: 257 EVKGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 295 Query: 220 DG 221 G Sbjct: 296 GG 297 >gi|240139009|ref|YP_002963484.1| hypothetical protein MexAM1_META1p2426 [Methylobacterium extorquens AM1] gi|240008981|gb|ACS40207.1| conserved hypothetical protein [Methylobacterium extorquens AM1] Length = 341 Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 33/76 (43%), Positives = 45/76 (59%), Gaps = 1/76 (1%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R D+G G+GA + + K P + V VDI+ AL A+ NA GV + SD S Sbjct: 161 RAADIGCGSGAAGILVAKRLPEAEVVLVDINPAALRAARINARLAGVGN-VRPVHSDMLS 219 Query: 160 SVEGLFDVIVSNPPYI 175 +VEG FD+IVSNPP++ Sbjct: 220 NVEGSFDLIVSNPPFM 235 >gi|206579318|ref|YP_002240577.1| ribosomal RNA small subunit methyltransferase C [Klebsiella pneumoniae 342] gi|226712957|sp|B5Y286|RSMC_KLEP3 RecName: Full=Ribosomal RNA small subunit methyltransferase C; AltName: Full=16S rRNA m2G1207 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rsmC gi|206568376|gb|ACI10152.1| ribosomal RNA small subunit methyltransferase C [Klebsiella pneumoniae 342] Length = 342 Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 38/132 (28%), Positives = 56/132 (42%), Gaps = 23/132 (17%) Query: 90 LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 L +E ++LD+G G G + L SP + D+S A+E +++ NG + Sbjct: 189 LSTLEPHTKGKVLDVGCGAGVLAAVLASHSPKVRLTLCDVSAPAVEASRATLAANGFAG- 247 Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209 D S+ FS V G FD+I+SNPP+ DG L + + Sbjct: 248 -DVFASNVFSEVNGRFDMIISNPPF---------------------HDGLQTSLEAAQAL 285 Query: 210 ADGVSRHLNKDG 221 G RHLN G Sbjct: 286 IRGAVRHLNSGG 297 >gi|291616166|ref|YP_003518908.1| RsmC [Pantoea ananatis LMG 20103] gi|291151196|gb|ADD75780.1| RsmC [Pantoea ananatis LMG 20103] Length = 374 Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 39/140 (27%), Positives = 61/140 (43%), Gaps = 23/140 (16%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 +D+ A L ++LD+G G G + +L SP + D+ A+E +K+ Sbjct: 212 LDAGSALLLSTFTPHTKGKVLDIGCGAGVIAASLPAHSPKVRLWLCDVHAAAIEASKATL 271 Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201 NG+ + S+ FS V G FD+I+SNPP+ E + SLD Sbjct: 272 AANGLEG--EVFASNVFSDVTGRFDMIISNPPFHEGT--------------QTSLDAA-- 313 Query: 202 GLSHYRTIADGVSRHLNKDG 221 +T+ G +HLN G Sbjct: 314 -----QTLIRGAVKHLNSGG 328 >gi|312866659|ref|ZP_07726873.1| methyltransferase small domain protein [Streptococcus parasanguinis F0405] gi|311097740|gb|EFQ55970.1| methyltransferase small domain protein [Streptococcus parasanguinis F0405] Length = 194 Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 34/99 (34%), Positives = 58/99 (58%), Gaps = 9/99 (9%) Query: 78 TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV---DISCKAL 134 ++ ++D L ++ ++ +LD+G G G + L+L K +GV V D++ +AL Sbjct: 35 SKKMIDYGSQVLLSTLDFQEGESVLDVGCGYGPIGLSLAKA----QGVAVTMVDVNERAL 90 Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173 ++AK NA NGV + SD + +VEG+FD ++SNPP Sbjct: 91 DLAKKNASRNGVEAQI--FSSDVYEAVEGVFDHVISNPP 127 >gi|229165089|ref|ZP_04292884.1| hypothetical protein bcere0007_860 [Bacillus cereus AH621] gi|228618352|gb|EEK75382.1| hypothetical protein bcere0007_860 [Bacillus cereus AH621] Length = 213 Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 36/96 (37%), Positives = 57/96 (59%), Gaps = 8/96 (8%) Query: 78 TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137 + LL++ AF +P ++ +LD+G G G + L+L KE + VD++ +AL +A Sbjct: 60 SRLLIE---AFQMPDVKGN----VLDVGCGYGPIGLSLAKEFQNREIHMVDVNERALGLA 112 Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173 K NAV N + E LQS + +V+G + VI+SNPP Sbjct: 113 KENAVNNRI-ENIRILQSSVYENVDGKYAVILSNPP 147 >gi|288937273|ref|YP_003441332.1| rRNA (guanine-N(2)-)-methyltransferase [Klebsiella variicola At-22] gi|290512677|ref|ZP_06552043.1| ribosomal RNA small subunit methyltransferase C [Klebsiella sp. 1_1_55] gi|288891982|gb|ADC60300.1| rRNA (guanine-N(2)-)-methyltransferase [Klebsiella variicola At-22] gi|289775018|gb|EFD83020.1| ribosomal RNA small subunit methyltransferase C [Klebsiella sp. 1_1_55] Length = 342 Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 38/132 (28%), Positives = 56/132 (42%), Gaps = 23/132 (17%) Query: 90 LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 L +E ++LD+G G G + L SP + D+S A+E +++ NG + Sbjct: 189 LSTLEPHTKGKVLDVGCGAGVLAAVLASHSPKVRLTLCDVSAPAVEASRATLAANGFAG- 247 Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209 D S+ FS V G FD+I+SNPP+ DG L + + Sbjct: 248 -DVFASNVFSEVNGRFDMIISNPPF---------------------HDGLQTSLEAAQAL 285 Query: 210 ADGVSRHLNKDG 221 G RHLN G Sbjct: 286 IRGAVRHLNSGG 297 >gi|229089232|ref|ZP_04220513.1| hypothetical protein bcere0021_870 [Bacillus cereus Rock3-42] gi|228694071|gb|EEL47753.1| hypothetical protein bcere0021_870 [Bacillus cereus Rock3-42] Length = 164 Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 36/87 (41%), Positives = 51/87 (58%), Gaps = 5/87 (5%) Query: 87 AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146 AF +P I K D ILD+G G G + L+L KE K VD++ +ALE+AK NA N + Sbjct: 17 AFQVPDI-KGD---ILDVGCGYGPIGLSLAKEFQDRKVHMVDVNERALELAKENAANNKI 72 Query: 147 SERFDTLQSDWFSSVEGLFDVIVSNPP 173 QS + +V+G++ I+SNPP Sbjct: 73 G-NVHIFQSSVYENVDGMYAAILSNPP 98 >gi|255607375|ref|XP_002538718.1| methyltransferase, putative [Ricinus communis] gi|223510766|gb|EEF23665.1| methyltransferase, putative [Ricinus communis] Length = 206 Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 50/162 (30%), Positives = 74/162 (45%), Gaps = 22/162 (13%) Query: 63 VRLTLSSDTFEPRP--ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120 + LT+ + + PR TE + + A L E R +L+LG G+GA L LL Sbjct: 1 MELTVPAGVYAPRAGSSTEFVSRNWWAAHLD--EARG--SLLELGAGSGA--LTLLAARQ 54 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVI 179 ++ G DI A+ A+ NA NG+ F QSD F + +G FDVI+ N PY Sbjct: 55 GWRATGADIDGAAVSSAQENAARNGIEAEFR--QSDLFEAFKGERFDVILFNQPYFHKPD 112 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221 V + D + R++ + + D +RHLN G Sbjct: 113 VQNHERALADLNGRLT-----------QRMLDEAARHLNPGG 143 >gi|229153879|ref|ZP_04282009.1| hypothetical protein bcere0010_860 [Bacillus cereus ATCC 4342] gi|228629560|gb|EEK86257.1| hypothetical protein bcere0010_860 [Bacillus cereus ATCC 4342] Length = 199 Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 37/87 (42%), Positives = 51/87 (58%), Gaps = 5/87 (5%) Query: 87 AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146 AF +P I K D ILD+G G G + L+L KE K VD++ +ALE+AK NA N V Sbjct: 52 AFQVPDI-KGD---ILDVGCGYGPIGLSLAKEFQDRKVHMVDVNERALELAKENAANNRV 107 Query: 147 SERFDTLQSDWFSSVEGLFDVIVSNPP 173 QS + +V+G++ I+SNPP Sbjct: 108 GN-VHIFQSSIYENVDGMYAAILSNPP 133 >gi|229820159|ref|YP_002881685.1| modification methylase, HemK family [Beutenbergia cavernae DSM 12333] gi|229566072|gb|ACQ79923.1| modification methylase, HemK family [Beutenbergia cavernae DSM 12333] Length = 257 Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 54/214 (25%), Positives = 89/214 (41%), Gaps = 33/214 (15%) Query: 44 RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103 R + E + ++GW F R+ +S F PR +ELL A+ + P Sbjct: 44 RRIAGEPLEHVVGWALFAGRRIRVSPGVFVPRSRSELLAREAIRLTRP------------ 91 Query: 104 LGTGTGAVCL------ALLKESPFFKGVGVDISCKALEIAK---SNAVTNGVSERFDTLQ 154 GAV + L + VG+++ L+ A + +GV++ + Sbjct: 92 -----GAVVVDLCCGAGALAAAIADAVVGLELHAADLDPAAVRDARRTLDGVAQ---VHE 143 Query: 155 SDWFSSVE----GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210 D F+++ G DV+V+N PY+ + + + E R+ + ++LDGG DGL R IA Sbjct: 144 GDLFAALPQHLRGRVDVLVANTPYVPTDELHLMPREAREHEAPLALDGGGDGLDVQRRIA 203 Query: 211 DGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 + L G VE+ Q I S L Sbjct: 204 ADAAGWLTPGGHLLVEVSSRQAPTAAAIMASGGL 237 >gi|322704989|gb|EFY96578.1| hypothetical protein MAA_07861 [Metarhizium anisopliae ARSEF 23] Length = 356 Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 52/176 (29%), Positives = 77/176 (43%), Gaps = 30/176 (17%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETEL-------LVDSALAFSLPRIEKRDVVRILD 103 + ILG + F + + S PRPETE L+ + + I+D Sbjct: 70 LQYILGSQPFGPLDIKCRSGVLIPRPETEAYTYHLVDLIKTGELLGSKSSNDNAELSIVD 129 Query: 104 LGTGTGAVCLALLKE-SPFFKGV---GVDISCKALEIAKSNAVTNG---------VSERF 150 L TGTG + L L P F+ + GVDIS +A+ +AK N N ++ Sbjct: 130 LCTGTGCIPLLLYTLLQPSFRRLRVRGVDISPQAVGLAKLNVRHNSKLGNIAASQPGQKL 189 Query: 151 DTLQSDWFSS------VEGLFDVIVSNPPYIESVIVD----CLGLEVRDFDPRISL 196 D L+ D F + D++VSNPPY+ D LG VR ++PR++L Sbjct: 190 DILRGDIFKDQDIALVAQTPCDILVSNPPYVSQRAWDFGQEGLGYSVRKYEPRLAL 245 >gi|127514158|ref|YP_001095355.1| rRNA (guanine-N(2)-)-methyltransferase [Shewanella loihica PV-4] gi|226712992|sp|A3QHZ8|RSMC_SHELP RecName: Full=Ribosomal RNA small subunit methyltransferase C; AltName: Full=16S rRNA m2G1207 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rsmC gi|126639453|gb|ABO25096.1| 16S rRNA m(2)G 1207 methyltransferase [Shewanella loihica PV-4] Length = 342 Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 34/97 (35%), Positives = 51/97 (52%), Gaps = 11/97 (11%) Query: 78 TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137 TELL++ LP ++ R +LD G G G + ALLK +P + VDI+ AL Sbjct: 191 TELLLEH-----LPTLKGR----VLDFGCGAGVITAALLKANPDLELECVDINAMALASC 241 Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174 + NG+ + SD + +G+FD I+SNPP+ Sbjct: 242 ELTLAANGMQAK--VYASDGLTQTQGMFDAIISNPPF 276 >gi|297196307|ref|ZP_06913705.1| methyltransferase [Streptomyces pristinaespiralis ATCC 25486] gi|197722884|gb|EDY66792.1| methyltransferase [Streptomyces pristinaespiralis ATCC 25486] Length = 221 Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 51/168 (30%), Positives = 72/168 (42%), Gaps = 23/168 (13%) Query: 59 DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118 D V L L+ + P+ +T LL D+ L R + +LD+GTGTGA+ L + Sbjct: 2 DRGAVALVLAPGVYAPQSDTFLLADA-----LEREPLKPGAEVLDVGTGTGALALTAARR 56 Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIES 177 + VD S +A+ + NAV R L D G FD+IV NPPY+ + Sbjct: 57 G--ARVTAVDRSWRAVVATRLNAVL--ARRRVRVLHGDLLDPAMGRRFDLIVCNPPYVPA 112 Query: 178 VIVDCLGLEVRDFDPR----ISLDGGIDGLSHYRTIADGVSRHLNKDG 221 PR ++ D G DG + I DG + LN G Sbjct: 113 ---------PHAHPPRRGAAVAWDAGHDGRAVLDRICDGAAELLNPSG 151 >gi|49476714|ref|YP_034453.1| methyltransferase [Bacillus thuringiensis serovar konkukian str. 97-27] gi|196036938|ref|ZP_03104319.1| ybxB protein [Bacillus cereus W] gi|196042331|ref|ZP_03109606.1| ybxB protein [Bacillus cereus NVH0597-99] gi|218901304|ref|YP_002449138.1| ybxB protein [Bacillus cereus AH820] gi|228925354|ref|ZP_04088450.1| hypothetical protein bthur0010_880 [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228931603|ref|ZP_04094509.1| hypothetical protein bthur0009_960 [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228943907|ref|ZP_04106292.1| hypothetical protein bthur0007_880 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|229119763|ref|ZP_04249024.1| hypothetical protein bcere0016_880 [Bacillus cereus 95/8201] gi|301051838|ref|YP_003790049.1| hypothetical protein BACI_c01280 [Bacillus anthracis CI] gi|49328270|gb|AAT58916.1| conserved hypothetical protein, possible methyltransferase [Bacillus thuringiensis serovar konkukian str. 97-27] gi|195990451|gb|EDX54438.1| ybxB protein [Bacillus cereus W] gi|196026837|gb|EDX65469.1| ybxB protein [Bacillus cereus NVH0597-99] gi|218536109|gb|ACK88507.1| ybxB protein [Bacillus cereus AH820] gi|228663664|gb|EEL19243.1| hypothetical protein bcere0016_880 [Bacillus cereus 95/8201] gi|228815740|gb|EEM61976.1| hypothetical protein bthur0007_880 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228828031|gb|EEM73759.1| hypothetical protein bthur0009_960 [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228834276|gb|EEM79817.1| hypothetical protein bthur0010_880 [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|300374007|gb|ADK02911.1| conserved hypothetical protein [Bacillus cereus biovar anthracis str. CI] Length = 199 Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 36/87 (41%), Positives = 51/87 (58%), Gaps = 5/87 (5%) Query: 87 AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146 AF +P I K D ILD+G G G + L+L KE K VD++ +ALE+AK NA N + Sbjct: 52 AFQVPDI-KGD---ILDVGCGYGPIGLSLAKEFQDRKVHMVDVNERALELAKENAANNKI 107 Query: 147 SERFDTLQSDWFSSVEGLFDVIVSNPP 173 QS + +V+G++ I+SNPP Sbjct: 108 GN-VHIFQSSVYENVDGMYAAILSNPP 133 >gi|300119588|ref|ZP_07057132.1| ybxB protein [Bacillus cereus SJ1] gi|298723060|gb|EFI63958.1| ybxB protein [Bacillus cereus SJ1] Length = 199 Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 36/87 (41%), Positives = 51/87 (58%), Gaps = 5/87 (5%) Query: 87 AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146 AF +P I K D ILD+G G G + L+L KE K VD++ +ALE+AK NA N + Sbjct: 52 AFQVPDI-KGD---ILDVGCGYGPIGLSLAKEFQDRKVHMVDVNERALELAKENAANNKI 107 Query: 147 SERFDTLQSDWFSSVEGLFDVIVSNPP 173 QS + +V+G++ I+SNPP Sbjct: 108 G-NVHIFQSSVYENVDGMYAAILSNPP 133 >gi|228912840|ref|ZP_04076487.1| hypothetical protein bthur0012_890 [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228846776|gb|EEM91781.1| hypothetical protein bthur0012_890 [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 213 Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 38/96 (39%), Positives = 56/96 (58%), Gaps = 8/96 (8%) Query: 78 TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137 + LL++ AF +P I K D ILD+G G G + L+L KE K VD++ +ALE+A Sbjct: 60 SRLLIE---AFQVPDI-KGD---ILDVGCGYGPIGLSLAKEFQDRKVHMVDVNERALELA 112 Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173 K NA N + QS + +V+G++ I+SNPP Sbjct: 113 KENAANNKIGN-VHIFQSSVYENVDGMYAAILSNPP 147 >gi|52145117|ref|YP_081712.1| methyltransferase [Bacillus cereus E33L] gi|51978586|gb|AAU20136.1| conserved hypothetical protein; possible methyltransferase [Bacillus cereus E33L] Length = 199 Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 36/87 (41%), Positives = 51/87 (58%), Gaps = 5/87 (5%) Query: 87 AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146 AF +P I K D ILD+G G G + L+L KE K VD++ +ALE+AK NA N + Sbjct: 52 AFQVPDI-KGD---ILDVGCGYGPIGLSLAKEFQDRKVHMVDVNERALELAKENAANNKI 107 Query: 147 SERFDTLQSDWFSSVEGLFDVIVSNPP 173 QS + +V+G++ I+SNPP Sbjct: 108 GN-VHIFQSSVYENVDGMYAAILSNPP 133 >gi|327396406|dbj|BAK13828.1| ribosomal RNA small subunit methyltransferase C RsmC [Pantoea ananatis AJ13355] Length = 367 Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 36/122 (29%), Positives = 56/122 (45%), Gaps = 23/122 (18%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LD+G G G + +L SP + D+ A+E +K+ NG+ + S+ FS Sbjct: 223 KVLDIGCGAGVIAASLPAHSPKVRLWLCDVHAAAIEASKATLAANGLEG--EVFASNVFS 280 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 V G FD+I+SNPP+ E + SLD +T+ G +HLN Sbjct: 281 DVTGRFDMIISNPPFHEGT--------------QTSLDAA-------QTLIRGAVKHLNS 319 Query: 220 DG 221 G Sbjct: 320 GG 321 >gi|118475870|ref|YP_893021.1| 16S rRNA m(2)G 1207 methyltransferase [Bacillus thuringiensis str. Al Hakam] gi|118415095|gb|ABK83514.1| 16S rRNA m(2)G 1207 methyltransferase [Bacillus thuringiensis str. Al Hakam] Length = 213 Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 36/87 (41%), Positives = 51/87 (58%), Gaps = 5/87 (5%) Query: 87 AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146 AF +P I K D ILD+G G G + L+L KE K VD++ +ALE+AK NA N + Sbjct: 66 AFQVPDI-KGD---ILDVGCGYGPIGLSLAKEFQDRKIHMVDVNERALELAKENAANNKI 121 Query: 147 SERFDTLQSDWFSSVEGLFDVIVSNPP 173 QS + +V+G++ I+SNPP Sbjct: 122 G-NVHIFQSSVYENVDGMYAAILSNPP 147 >gi|255325130|ref|ZP_05366236.1| rRNA or tRNA methylase [Corynebacterium tuberculostearicum SK141] gi|255297695|gb|EET77006.1| rRNA or tRNA methylase [Corynebacterium tuberculostearicum SK141] Length = 523 Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 37/103 (35%), Positives = 53/103 (51%), Gaps = 3/103 (2%) Query: 74 PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133 P P+ L V +A L V +LDLGTG+G L L + K D+ +A Sbjct: 140 PGPDHVLGVGAASLSLLQSTPVSPVGSVLDLGTGSGVQLLGQLDCAE--KITATDVHERA 197 Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYI 175 LE+A++ G SE+ + LQ WF V G FD +V+NPP++ Sbjct: 198 LELAEATIAATGDSEKVELLQGSWFDPVAGRRFDRLVANPPFV 240 >gi|253568320|ref|ZP_04845731.1| conserved hypothetical protein [Bacteroides sp. 1_1_6] gi|251842393|gb|EES70473.1| conserved hypothetical protein [Bacteroides sp. 1_1_6] Length = 237 Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 47/130 (36%), Positives = 65/130 (50%), Gaps = 11/130 (8%) Query: 100 RILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 RILD+GTGTG V L L + S P V ++I A AK N + +R + ++ D+ Sbjct: 40 RILDIGTGTGLVALMLAQRSLPDANIVALEIDEAAAGQAKENVARSPWKDRIEVVKQDFL 99 Query: 159 S-SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217 S FDVIVSNPPY VD L D + S+ D L+ Y + GV+ L Sbjct: 100 SYQSPDKFDVIVSNPPY----FVDSLSCP----DQQRSMARHNDSLT-YEKLLKGVADLL 150 Query: 218 NKDGLCSVEI 227 K+G ++ I Sbjct: 151 KKEGTFTIVI 160 >gi|282163397|ref|YP_003355782.1| methyltransferase [Methanocella paludicola SANAE] gi|282155711|dbj|BAI60799.1| methyltransferase [Methanocella paludicola SANAE] Length = 192 Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 50/164 (30%), Positives = 78/164 (47%), Gaps = 21/164 (12%) Query: 58 RDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117 R + N L D ++P ++ LLV++AL E + R+L++GTG+G V +L Sbjct: 4 RVYRNKEFELLDDVYDPGEDSYLLVEAALK------EVKPDDRVLEVGTGSGVV--SLFV 55 Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIES 177 + K V DIS IA NA NGV +++D +S + FD+I+ NPPY+ + Sbjct: 56 KDIAAKVVATDIS----PIACRNARINGVP----VVRADLYSGICSQFDLIIFNPPYLPT 107 Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221 V + LG + + DGG+ G + R L G Sbjct: 108 VPEEQLGSWLNR-----AFDGGLTGRREIERFIKDIDRILAPGG 146 >gi|225862153|ref|YP_002747531.1| ybxB protein [Bacillus cereus 03BB102] gi|229182495|ref|ZP_04309746.1| hypothetical protein bcere0004_880 [Bacillus cereus BGSC 6E1] gi|225786254|gb|ACO26471.1| ybxB protein [Bacillus cereus 03BB102] gi|228600950|gb|EEK58519.1| hypothetical protein bcere0004_880 [Bacillus cereus BGSC 6E1] Length = 199 Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 36/87 (41%), Positives = 51/87 (58%), Gaps = 5/87 (5%) Query: 87 AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146 AF +P I K D ILD+G G G + L+L KE K VD++ +ALE+AK NA N + Sbjct: 52 AFQVPDI-KGD---ILDVGCGYGPIGLSLAKEFQDRKIHMVDVNERALELAKENAANNKI 107 Query: 147 SERFDTLQSDWFSSVEGLFDVIVSNPP 173 QS + +V+G++ I+SNPP Sbjct: 108 G-NVHIFQSSVYENVDGMYAAILSNPP 133 >gi|298385622|ref|ZP_06995180.1| SmtA protein [Bacteroides sp. 1_1_14] gi|298261763|gb|EFI04629.1| SmtA protein [Bacteroides sp. 1_1_14] Length = 237 Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 47/130 (36%), Positives = 65/130 (50%), Gaps = 11/130 (8%) Query: 100 RILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 RILD+GTGTG V L L + S P V ++I A AK N + +R + ++ D+ Sbjct: 40 RILDIGTGTGLVALMLAQRSLPDANIVALEIDEAAAVQAKENVARSPWKDRIEVVKQDFL 99 Query: 159 S-SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217 S FDVIVSNPPY VD L D + S+ D L+ Y + GV+ L Sbjct: 100 SYQSPDKFDVIVSNPPY----FVDSLSCP----DQQRSMARHNDSLT-YEKLLKGVADLL 150 Query: 218 NKDGLCSVEI 227 K+G ++ I Sbjct: 151 KKEGTFTIVI 160 >gi|126465946|ref|YP_001041055.1| methyltransferase small [Staphylothermus marinus F1] gi|126014769|gb|ABN70147.1| methyltransferase small [Staphylothermus marinus F1] Length = 193 Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 40/116 (34%), Positives = 57/116 (49%), Gaps = 5/116 (4%) Query: 63 VRLTLSSDTFEPRPETELL----VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118 + LT+ T E T L VD L I+ D +LD+G G G + L + K Sbjct: 16 IPLTIRGVTLEFVSYTSLFSGREVDKGTYLLLKYIDVPDEGEVLDVGCGYGVIGLTIAKL 75 Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPP 173 +P K VDI+ A++I K NA N + ++ LQ D + V+ L F+ I SNPP Sbjct: 76 NPRLKVYMVDINPLAVKITKYNAKLNNLEKQVVVLQGDVYEPVKNLRFNAIYSNPP 131 >gi|319744973|gb|EFV97302.1| methyltransferase domain protein [Streptococcus agalactiae ATCC 13813] Length = 196 Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 31/73 (42%), Positives = 44/73 (60%), Gaps = 3/73 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LDLG G G + ++L K K VDI+ +ALE+AK NA NGV + QS+ + + Sbjct: 61 LLDLGCGYGPLGISLAKVQGV-KATMVDINTRALELAKKNATRNGVV--VEVFQSNIYEN 117 Query: 161 VEGLFDVIVSNPP 173 + FD I+SNPP Sbjct: 118 ISKTFDYIISNPP 130 >gi|300926393|ref|ZP_07142190.1| methyltransferase small domain protein [Escherichia coli MS 182-1] gi|300417588|gb|EFK00899.1| methyltransferase small domain protein [Escherichia coli MS 182-1] Length = 343 Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 36/122 (29%), Positives = 59/122 (48%), Gaps = 23/122 (18%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LD+G G G + +A + SP + D+S A+E +++ N V + S+ FS Sbjct: 199 KVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAGNCVEG--EVFASNVFS 256 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 V+G FD+I+SNPP+ + + + SLD +T+ G RHLN Sbjct: 257 EVKGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 295 Query: 220 DG 221 G Sbjct: 296 GG 297 >gi|258509264|ref|YP_003172015.1| 16S rRNA m(2)G 1207 methyltransferase [Lactobacillus rhamnosus GG] gi|257149191|emb|CAR88164.1| 16S rRNA m(2)G 1207 methyltransferase [Lactobacillus rhamnosus GG] gi|259650546|dbj|BAI42708.1| 16S rRNA methylase [Lactobacillus rhamnosus GG] Length = 198 Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 33/96 (34%), Positives = 54/96 (56%), Gaps = 7/96 (7%) Query: 78 TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137 + +L+ + LA +LP ILD+G G G + LAL K P + D++ +AL +A Sbjct: 45 SRVLIATVLAETLPDGP------ILDVGAGYGPIGLALAKHFPNRQVTMSDVNERALALA 98 Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173 K NA NG++ ++S + S++ F V+V+NPP Sbjct: 99 KQNAADNGITN-VSIIESSMYDSIDDQFAVVVTNPP 133 >gi|22537113|ref|NP_687964.1| hypothetical protein SAG0952 [Streptococcus agalactiae 2603V/R] gi|25010994|ref|NP_735389.1| hypothetical protein gbs0940 [Streptococcus agalactiae NEM316] gi|76788359|ref|YP_329668.1| methyltransferase domain-containing protein [Streptococcus agalactiae A909] gi|77406474|ref|ZP_00783529.1| Methyltransferase small domain family [Streptococcus agalactiae H36B] gi|77411028|ref|ZP_00787383.1| Methyltransferase small domain family [Streptococcus agalactiae CJB111] gi|77413257|ref|ZP_00789454.1| Methyltransferase small domain family [Streptococcus agalactiae 515] gi|22533974|gb|AAM99836.1|AE014235_9 conserved hypothetical protein [Streptococcus agalactiae 2603V/R] gi|23095394|emb|CAD46599.1| Unknown [Streptococcus agalactiae NEM316] gi|76563416|gb|ABA46000.1| methyltransferase domain protein [Streptococcus agalactiae A909] gi|77160717|gb|EAO71831.1| Methyltransferase small domain family [Streptococcus agalactiae 515] gi|77162952|gb|EAO73908.1| Methyltransferase small domain family [Streptococcus agalactiae CJB111] gi|77174909|gb|EAO77723.1| Methyltransferase small domain family [Streptococcus agalactiae H36B] Length = 196 Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 31/73 (42%), Positives = 44/73 (60%), Gaps = 3/73 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LDLG G G + ++L K K VDI+ +ALE+AK NA NGV + QS+ + + Sbjct: 61 LLDLGCGYGPLGISLAKVQGV-KATMVDINTRALELAKKNATRNGVV--VEVFQSNIYEN 117 Query: 161 VEGLFDVIVSNPP 173 + FD I+SNPP Sbjct: 118 ISKTFDYIISNPP 130 >gi|218262704|ref|ZP_03477062.1| hypothetical protein PRABACTJOHN_02741 [Parabacteroides johnsonii DSM 18315] gi|218223193|gb|EEC95843.1| hypothetical protein PRABACTJOHN_02741 [Parabacteroides johnsonii DSM 18315] Length = 238 Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 48/152 (31%), Positives = 74/152 (48%), Gaps = 17/152 (11%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVSERFDTLQS-- 155 RILD+GTGTG + + L + S K V +DI +A A+ NA ++ +ER S Sbjct: 40 RILDIGTGTGLIAMMLAQRS---KAVIDAIDIDAEACLQAQENAESSPFAERIKIQHSAL 96 Query: 156 -DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214 D+ + GL+D+IVSNPPY VD L D + + D L+ + D Sbjct: 97 SDFAQTDTGLYDLIVSNPPY----FVDSLKCP----DQKRNTARHTDTLTLEDLLQDS-R 147 Query: 215 RHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246 + L G ++ + Y+QK + ++ LFL Sbjct: 148 KLLAPQGRIALILPYDQKERLTDCIRTQNLFL 179 >gi|296101149|ref|YP_003611295.1| 16S ribosomal RNA m2G1207 methyltransferase [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295055608|gb|ADF60346.1| 16S ribosomal RNA m2G1207 methyltransferase [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 342 Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 37/122 (30%), Positives = 53/122 (43%), Gaps = 23/122 (18%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LD+G G G + L SP + D+S A+E +++ NG D S+ FS Sbjct: 199 KVLDVGCGAGVLATVLASHSPKVRLTLCDVSAPAVEASRATLAANGFEG--DVFASNVFS 256 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 V G FD+I+SNPP+ DG L +T+ G RHLN Sbjct: 257 DVTGRFDMIISNPPF---------------------HDGIETSLEAAQTLIRGAVRHLNS 295 Query: 220 DG 221 G Sbjct: 296 GG 297 >gi|315926839|gb|EFV06213.1| methyltransferase small domain protein [Campylobacter jejuni subsp. jejuni DFVF1099] Length = 222 Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 57/211 (27%), Positives = 94/211 (44%), Gaps = 19/211 (9%) Query: 11 LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70 LC + ++ D +D F L I R E I DF+ + + Sbjct: 25 LCEYLKKDKAWLFLNQDIKIDHEPYFEL---IKRFKSGEPFEYIFEKVDFWGLEFKIKKG 81 Query: 71 TFEPRPETELLVDSALAFSLPRIEKRDVVR-ILDLGTGTGAVCLALLKESPFFKGVGVDI 129 PR ++E+L+ F + + K++ IL++G G+G + + L KE K DI Sbjct: 82 ILIPRYDSEILL-----FQILNLCKKNTFNGILEIGFGSGILSIVLAKELGL-KITACDI 135 Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE-SVIVDCLGLEVR 188 + KALE+A NA + V D + F ++ +D I SNPPYI+ S +D + Sbjct: 136 NPKALELALENAQLHKVDHLIDFKLCN-FKQIKENYDFIFSNPPYIKNSYPIDIWVQK-- 192 Query: 189 DFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 +P+ +L GG G Y + + + L+K Sbjct: 193 --EPKEALFGGEKG---YEILEEIIHFSLDK 218 >gi|116515142|ref|YP_802771.1| 16S RNA m2G1207 methylase [Buchnera aphidicola str. Cc (Cinara cedri)] gi|122285462|sp|Q057M1|RSMC_BUCCC RecName: Full=Ribosomal RNA small subunit methyltransferase C; AltName: Full=16S rRNA m2G1207 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rsmC gi|116256996|gb|ABJ90678.1| 16S RNA m2G1207 methylase [Buchnera aphidicola str. Cc (Cinara cedri)] Length = 343 Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 30/92 (32%), Positives = 53/92 (57%), Gaps = 2/92 (2%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 +D+ + K+ +ILD+G+GTG + +AL K++P K DI A+ +K+N Sbjct: 188 IDTGSKLLISTFNKKINGKILDIGSGTGILSIALAKKNPLIKITLTDIYDAAIWCSKNNL 247 Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173 + N + + L SD +S ++ +D+I+SNPP Sbjct: 248 IKNNLIGK--VLFSDIYSHIKKRYDLIISNPP 277 >gi|229552941|ref|ZP_04441666.1| methyltransferase [Lactobacillus rhamnosus LMS2-1] gi|229313685|gb|EEN79658.1| methyltransferase [Lactobacillus rhamnosus LMS2-1] Length = 206 Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 33/96 (34%), Positives = 54/96 (56%), Gaps = 7/96 (7%) Query: 78 TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137 + +L+ + LA +LP ILD+G G G + LAL K P + D++ +AL +A Sbjct: 53 SRVLIAAVLAETLPDGP------ILDVGAGYGPIGLALAKHFPNRQVTMSDVNERALALA 106 Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173 K NA NG++ ++S + S++ F V+V+NPP Sbjct: 107 KQNAADNGIT-NVSIIESSMYDSIDDQFAVVVTNPP 141 >gi|30260292|ref|NP_842669.1| ybxB protein [Bacillus anthracis str. Ames] gi|47525356|ref|YP_016705.1| methyltransferase [Bacillus anthracis str. 'Ames Ancestor'] gi|49183135|ref|YP_026387.1| ybxB protein [Bacillus anthracis str. Sterne] gi|65317558|ref|ZP_00390517.1| COG2813: 16S RNA G1207 methylase RsmC [Bacillus anthracis str. A2012] gi|165873340|ref|ZP_02217942.1| ybxB protein [Bacillus anthracis str. A0488] gi|167636698|ref|ZP_02394985.1| ybxB protein [Bacillus anthracis str. A0442] gi|167642036|ref|ZP_02400265.1| ybxB protein [Bacillus anthracis str. A0193] gi|170689708|ref|ZP_02880884.1| ybxB protein [Bacillus anthracis str. A0465] gi|170709437|ref|ZP_02899844.1| ybxB protein [Bacillus anthracis str. A0389] gi|177656135|ref|ZP_02937162.1| ybxB protein [Bacillus anthracis str. A0174] gi|190569398|ref|ZP_03022285.1| ybxB protein [Bacillus anthracis Tsiankovskii-I] gi|227812774|ref|YP_002812783.1| ybxB protein [Bacillus anthracis str. CDC 684] gi|228983356|ref|ZP_04143569.1| hypothetical protein bthur0001_870 [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|229602055|ref|YP_002864752.1| ybxB protein [Bacillus anthracis str. A0248] gi|254684395|ref|ZP_05148255.1| ybxB protein [Bacillus anthracis str. CNEVA-9066] gi|254720822|ref|ZP_05182614.1| ybxB protein [Bacillus anthracis str. A1055] gi|254733744|ref|ZP_05191459.1| ybxB protein [Bacillus anthracis str. Western North America USA6153] gi|254739413|ref|ZP_05197113.1| ybxB protein [Bacillus anthracis str. Kruger B] gi|254751214|ref|ZP_05203252.1| ybxB protein [Bacillus anthracis str. Vollum] gi|254756813|ref|ZP_05208841.1| ybxB protein [Bacillus anthracis str. Australia 94] gi|30253613|gb|AAP24155.1| ybxB protein [Bacillus anthracis str. Ames] gi|47500504|gb|AAT29180.1| ybxB protein [Bacillus anthracis str. 'Ames Ancestor'] gi|49177062|gb|AAT52438.1| ybxB protein [Bacillus anthracis str. Sterne] gi|164710920|gb|EDR16495.1| ybxB protein [Bacillus anthracis str. A0488] gi|167510002|gb|EDR85419.1| ybxB protein [Bacillus anthracis str. A0193] gi|167527872|gb|EDR90699.1| ybxB protein [Bacillus anthracis str. A0442] gi|170125654|gb|EDS94574.1| ybxB protein [Bacillus anthracis str. A0389] gi|170666333|gb|EDT17120.1| ybxB protein [Bacillus anthracis str. A0465] gi|172079855|gb|EDT64967.1| ybxB protein [Bacillus anthracis str. A0174] gi|190559491|gb|EDV13489.1| ybxB protein [Bacillus anthracis Tsiankovskii-I] gi|227007229|gb|ACP16972.1| ybxB protein [Bacillus anthracis str. CDC 684] gi|228776346|gb|EEM24699.1| hypothetical protein bthur0001_870 [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|229266463|gb|ACQ48100.1| ybxB protein [Bacillus anthracis str. A0248] Length = 199 Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 36/87 (41%), Positives = 51/87 (58%), Gaps = 5/87 (5%) Query: 87 AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146 AF +P I K D ILD+G G G + L+L KE K VD++ +ALE+AK NA N + Sbjct: 52 AFQVPDI-KGD---ILDVGCGYGPIGLSLAKEFQDRKVHMVDVNERALELAKENAANNRI 107 Query: 147 SERFDTLQSDWFSSVEGLFDVIVSNPP 173 QS + +V+G++ I+SNPP Sbjct: 108 GN-VHIFQSSVYENVDGMYAAILSNPP 133 >gi|229053947|ref|ZP_04195381.1| hypothetical protein bcere0026_870 [Bacillus cereus AH603] gi|228721365|gb|EEL72886.1| hypothetical protein bcere0026_870 [Bacillus cereus AH603] Length = 199 Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 33/87 (37%), Positives = 51/87 (58%), Gaps = 5/87 (5%) Query: 87 AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146 AF +P ++ +LD+G G G + L+L KE + VD++ +AL +AK NA N + Sbjct: 52 AFQMPDVKGN----VLDVGCGYGPIGLSLAKEFQNREIYMVDVNERALGLAKENAANNRI 107 Query: 147 SERFDTLQSDWFSSVEGLFDVIVSNPP 173 E LQS + +V+G + VI+SNPP Sbjct: 108 -ENIRILQSSVYENVDGKYAVILSNPP 133 >gi|229170952|ref|ZP_04298553.1| hypothetical protein bcere0006_880 [Bacillus cereus MM3] gi|228612492|gb|EEK69713.1| hypothetical protein bcere0006_880 [Bacillus cereus MM3] Length = 213 Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 38/96 (39%), Positives = 56/96 (58%), Gaps = 8/96 (8%) Query: 78 TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137 + LL++ AF +P I K D ILD+G G G + L+L KE K VD++ +ALE+A Sbjct: 60 SRLLIE---AFQVPDI-KGD---ILDVGCGYGPIGLSLAKEFQDRKVHMVDVNERALELA 112 Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173 K NA N + QS + +V+G++ I+SNPP Sbjct: 113 KENAANNRIGN-VHIFQSSVYENVDGMYAAILSNPP 147 >gi|239630123|ref|ZP_04673154.1| 16S RNA methylase RsmC [Lactobacillus paracasei subsp. paracasei 8700:2] gi|301067273|ref|YP_003789296.1| 16S RNA G1207 methylase RsmC [Lactobacillus casei str. Zhang] gi|239527735|gb|EEQ66736.1| 16S RNA methylase RsmC [Lactobacillus paracasei subsp. paracasei 8700:2] gi|300439680|gb|ADK19446.1| 16S RNA G1207 methylase RsmC [Lactobacillus casei str. Zhang] Length = 198 Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 34/96 (35%), Positives = 53/96 (55%), Gaps = 7/96 (7%) Query: 78 TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137 + +L+ + LA LP ILD+GTG G + LAL K P + D++ +AL +A Sbjct: 45 SRVLIATILAEELP------TGPILDVGTGYGPIGLALAKHFPDRQVTMSDVNERALALA 98 Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173 + NA N +S ++S + ++G F VIV+NPP Sbjct: 99 QRNATDNAIS-NVTIVESSMYDQIDGQFGVIVTNPP 133 >gi|42779182|ref|NP_976429.1| ybxB protein [Bacillus cereus ATCC 10987] gi|42735097|gb|AAS39037.1| ybxB protein [Bacillus cereus ATCC 10987] gi|324324091|gb|ADY19351.1| 16S rRNA m(2)G 1207 methyltransferase [Bacillus thuringiensis serovar finitimus YBT-020] Length = 199 Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 36/87 (41%), Positives = 51/87 (58%), Gaps = 5/87 (5%) Query: 87 AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146 AF +P I K D ILD+G G G + L+L KE K VD++ +ALE+AK NA N + Sbjct: 52 AFQVPDI-KGD---ILDVGCGYGPIGLSLAKEFQDRKVHMVDVNERALELAKENAANNRI 107 Query: 147 SERFDTLQSDWFSSVEGLFDVIVSNPP 173 QS + +V+G++ I+SNPP Sbjct: 108 GN-VHIFQSSVYENVDGMYAAILSNPP 133 >gi|293375381|ref|ZP_06621662.1| methyltransferase small domain protein [Turicibacter sanguinis PC909] gi|325844450|ref|ZP_08168177.1| methyltransferase small domain protein [Turicibacter sp. HGF1] gi|292645934|gb|EFF63963.1| methyltransferase small domain protein [Turicibacter sanguinis PC909] gi|325489124|gb|EGC91508.1| methyltransferase small domain protein [Turicibacter sp. HGF1] Length = 197 Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 37/96 (38%), Positives = 53/96 (55%), Gaps = 8/96 (8%) Query: 78 TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137 + LLV++ F+ P I ILD+G G G + L+L K P VD++ +ALE+A Sbjct: 44 SRLLVET---FAEPEISGN----ILDVGCGYGPIGLSLAKSYPNRNVHMVDVNQRALELA 96 Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173 K NA+ NGV E +S + V+ F I+SNPP Sbjct: 97 KKNAMNNGV-ENVMIYESHCYEGVDDRFAAILSNPP 131 >gi|191639206|ref|YP_001988372.1| 16S RNA methylase [Lactobacillus casei BL23] gi|190713508|emb|CAQ67514.1| 16S RNA methylase [Lactobacillus casei BL23] gi|327383284|gb|AEA54760.1| Hypothetical conserved protein [Lactobacillus casei LC2W] gi|327386467|gb|AEA57941.1| Hypothetical conserved protein [Lactobacillus casei BD-II] Length = 198 Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 34/96 (35%), Positives = 53/96 (55%), Gaps = 7/96 (7%) Query: 78 TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137 + +L+ + LA LP ILD+GTG G + LAL K P + D++ +AL +A Sbjct: 45 SRVLIATILAEELP------AGPILDVGTGYGPIGLALAKHFPDRQVTMSDVNERALALA 98 Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173 + NA N +S ++S + ++G F VIV+NPP Sbjct: 99 QRNATDNAIS-NVTIVESSMYDQIDGQFGVIVTNPP 133 >gi|217957676|ref|YP_002336220.1| ybxB protein [Bacillus cereus AH187] gi|222093871|ref|YP_002527921.1| ybxb protein [Bacillus cereus Q1] gi|229136947|ref|ZP_04265574.1| hypothetical protein bcere0013_910 [Bacillus cereus BDRD-ST26] gi|229194491|ref|ZP_04321294.1| hypothetical protein bcere0001_870 [Bacillus cereus m1293] gi|217063004|gb|ACJ77254.1| ybxB protein [Bacillus cereus AH187] gi|221237919|gb|ACM10629.1| ybxB protein [Bacillus cereus Q1] gi|228588957|gb|EEK46972.1| hypothetical protein bcere0001_870 [Bacillus cereus m1293] gi|228646485|gb|EEL02692.1| hypothetical protein bcere0013_910 [Bacillus cereus BDRD-ST26] Length = 199 Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 36/87 (41%), Positives = 51/87 (58%), Gaps = 5/87 (5%) Query: 87 AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146 AF +P I K D ILD+G G G + L+L KE K VD++ +ALE+AK NA N + Sbjct: 52 AFQVPDI-KGD---ILDVGCGYGPIGLSLAKEFQDRKVHMVDVNERALELAKENAANNRI 107 Query: 147 SERFDTLQSDWFSSVEGLFDVIVSNPP 173 QS + +V+G++ I+SNPP Sbjct: 108 GN-VHIFQSSVYENVDGMYAAILSNPP 133 >gi|229197607|ref|ZP_04324330.1| Modification methylase, HemK [Bacillus cereus m1293] gi|228585871|gb|EEK43966.1| Modification methylase, HemK [Bacillus cereus m1293] Length = 220 Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 57/194 (29%), Positives = 84/194 (43%), Gaps = 6/194 (3%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110 + ++G+ F +R+ + F PR TE LV A A S D+V +DL G+GA Sbjct: 11 LEYVVGYAKFCGLRIEVDRGVFVPRQRTEFLVHQAEALSC----FGDIV--VDLCCGSGA 64 Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170 V AL + VDI A+ A N + G L S++G I++ Sbjct: 65 VGAALAAALGRVELYCVDIDPIAVRCASRNVTSFGGHVFEGDLYKSLPHSLKGNVKTILA 124 Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230 N PY+ + + L E R ++P+++LDGG DGL R +A L G +E Sbjct: 125 NAPYVPTDAIKLLPQEARLYEPKVALDGGEDGLDIQRRVAKEAFLWLAPGGHLLIETSEM 184 Query: 231 QKVDVVRIFESRKL 244 Q IF L Sbjct: 185 QANQTFEIFAGAGL 198 >gi|222096949|ref|YP_002531006.1| methyltransferase [Bacillus cereus Q1] gi|221241007|gb|ACM13717.1| Methyltransferase [Bacillus cereus Q1] Length = 217 Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 57/194 (29%), Positives = 85/194 (43%), Gaps = 6/194 (3%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110 + ++G+ F +R+ + F PR TE LV A A S D+V +DL G+GA Sbjct: 8 LEYVVGYAKFCGMRIEVERGVFVPRQRTEFLVHQAEALSC----FGDIV--VDLCCGSGA 61 Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170 V AL + VDI A+ A N + G L S++G + I++ Sbjct: 62 VGAALAAALGRVELYCVDIDPIAVRCASRNVTSFGGHVFEGDLYKSLPHSLKGNVNTILA 121 Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230 N PY+ + + L E R ++P+++LDGG DGL R +A L G +E Sbjct: 122 NAPYVPTDAIKLLPQEARLYEPKVALDGGEDGLDIQRRVAKEAFLWLAPGGHLLIETSEM 181 Query: 231 QKVDVVRIFESRKL 244 Q IF L Sbjct: 182 QVDQTFEIFAGAGL 195 >gi|322696274|gb|EFY88069.1| hypothetical protein MAC_05933 [Metarhizium acridum CQMa 102] Length = 278 Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 49/158 (31%), Positives = 72/158 (45%), Gaps = 30/158 (18%) Query: 69 SDTFEPRPETEL-------LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL--LKES 119 S PRPETE L+ + + + I+DL TGTG + L L L +S Sbjct: 10 SGVLIPRPETEAYTYHLVDLIKTGELLGSKSSDDNAELSIVDLCTGTGCIPLLLYTLLQS 69 Query: 120 PF--FKGVGVDISCKALEIAK---------SNAVTNGVSERFDTLQSDWFSS------VE 162 F + GVDIS +A+ +AK N T+ ++ D L+ D F + Sbjct: 70 SFQRLRVRGVDISPQAVGLAKLNVYHNAKLGNIATSQPGQKLDILRGDIFKDQDVAPIAQ 129 Query: 163 GLFDVIVSNPPYIESVIVD----CLGLEVRDFDPRISL 196 D++VSNPPY+ D LG VR ++PR++L Sbjct: 130 TPCDILVSNPPYVSQKAWDFGQGLLGCSVRKYEPRLAL 167 >gi|332366610|gb|EGJ44354.1| methyltransferase domain protein [Streptococcus sanguinis SK1059] Length = 195 Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 31/74 (41%), Positives = 45/74 (60%), Gaps = 3/74 (4%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+LD+G G G + L L K + VDI+ +AL++A+ NA N +S D QS+ + Sbjct: 60 RVLDVGCGYGPLGLTLAK-AQGVTATMVDINQRALDLAQKNAERNQISA--DIFQSNVYE 116 Query: 160 SVEGLFDVIVSNPP 173 V G+FD I+SNPP Sbjct: 117 KVNGIFDHIISNPP 130 >gi|77409396|ref|ZP_00786095.1| Methyltransferase small domain family [Streptococcus agalactiae COH1] gi|77172005|gb|EAO75175.1| Methyltransferase small domain family [Streptococcus agalactiae COH1] Length = 156 Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 31/73 (42%), Positives = 44/73 (60%), Gaps = 3/73 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LDLG G G + ++L K K VDI+ +ALE+AK NA NGV + QS+ + + Sbjct: 21 LLDLGCGYGPLGISLAKVQGV-KATMVDINTRALELAKKNATRNGVV--VEVFQSNIYEN 77 Query: 161 VEGLFDVIVSNPP 173 + FD I+SNPP Sbjct: 78 ISKTFDYIISNPP 90 >gi|76800405|ref|ZP_00782027.1| 16S rRNA m(2)G 1207 methyltransferase [Streptococcus agalactiae 18RS21] gi|76584395|gb|EAO61378.1| 16S rRNA m(2)G 1207 methyltransferase [Streptococcus agalactiae 18RS21] Length = 177 Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 31/73 (42%), Positives = 44/73 (60%), Gaps = 3/73 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LDLG G G + ++L K K VDI+ +ALE+AK NA NGV + QS+ + + Sbjct: 61 LLDLGCGYGPLGISLAKVQGV-KATMVDINTRALELAKKNATRNGVV--VEVFQSNIYEN 117 Query: 161 VEGLFDVIVSNPP 173 + FD I+SNPP Sbjct: 118 ISKTFDYIISNPP 130 >gi|295394650|ref|ZP_06804869.1| protein-(glutamine-N5) methyltransferase [Brevibacterium mcbrellneri ATCC 49030] gi|294972543|gb|EFG48399.1| protein-(glutamine-N5) methyltransferase [Brevibacterium mcbrellneri ATCC 49030] Length = 300 Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 62/223 (27%), Positives = 86/223 (38%), Gaps = 28/223 (12%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAF--SLPRIEKRDVVRILDLGTGT 108 + I G F + + + F PRPETEL+V A+ LP D +DL TG+ Sbjct: 73 LQHITGVAPFRYLEMHVGPGVFIPRPETELMVTYAIEHLAGLP----GDNHTAIDLCTGS 128 Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF-DTLQSDWFSSVEGLFD- 166 GA+ +AL E P V++S A + N ER+ T ++ + L D Sbjct: 129 GAIAIALATEVPRTHVHAVELSPDAALYTERNI------ERYRPTFEAHGSDVIPHLGDA 182 Query: 167 ----------VIVSNPPYIESVIVDCLGLEVRDFDPRISL-DGGIDGLSHYRTIADGVSR 215 VI NPPY+ + + + DP ++L GG DG + I R Sbjct: 183 TEFLGATSAQVITCNPPYVARTVEHAPEV---NSDPDLALYGGGKDGSELPQRIIAHAPR 239 Query: 216 HLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258 L GL E V F V DY G DR Sbjct: 240 LLAPGGLFMCEHAEYNSRTVENAFHRAGFTNVETVGDYTGRDR 282 >gi|332361388|gb|EGJ39192.1| methyltransferase domain protein [Streptococcus sanguinis SK1056] Length = 195 Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 31/74 (41%), Positives = 46/74 (62%), Gaps = 3/74 (4%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+LD+G G G + L L K + VDI+ +AL++A+ NA N +S + LQS+ + Sbjct: 60 RVLDVGCGYGPLGLTLAK-AQGVAATMVDINQRALDLAQKNAERNQISA--EILQSNVYE 116 Query: 160 SVEGLFDVIVSNPP 173 V G+FD I+SNPP Sbjct: 117 KVSGIFDHIISNPP 130 >gi|329297754|ref|ZP_08255090.1| 16S ribosomal RNA m2G1207 methyltransferase [Plautia stali symbiont] Length = 343 Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 36/122 (29%), Positives = 58/122 (47%), Gaps = 23/122 (18%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LD+G G+G + AL + SP + D+ A+E +K+ NG+ + S+ FS Sbjct: 199 KVLDIGCGSGVLAAALAQHSPKVRLWLCDVHAAAIEASKATLAANGLEG--EVFVSNVFS 256 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 V G FD+I+SNPP+ + + + SLD T+ G +HLN Sbjct: 257 DVSGRFDLIISNPPFHDGL--------------QTSLDAA-------HTLIRGAVKHLNS 295 Query: 220 DG 221 G Sbjct: 296 GG 297 >gi|257076094|ref|ZP_05570455.1| methyltransferase [Ferroplasma acidarmanus fer1] Length = 180 Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 41/159 (25%), Positives = 72/159 (45%), Gaps = 26/159 (16%) Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + + S D ++P +T L++D+A +L++G+G+G + + L ++ Sbjct: 2 INIDYSDDVYKPSDDTYLILDNAECGK----------SVLEMGSGSGLIAITLARQG--H 49 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182 DIS +A+ + K NA N V + ++SD F ++ G +D I+ NPPY Sbjct: 50 SVTAADISPEAINLIKHNAFINNVD--MEIVRSDLFENIHGKYDTIIFNPPY-------- 99 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221 L V P+ + GG DG + +LN G Sbjct: 100 --LPVEGESPQWA--GGKDGFAVTGKFLATAHEYLNPGG 134 >gi|255536286|ref|YP_003096657.1| Methyltransferase [Flavobacteriaceae bacterium 3519-10] gi|262828309|sp|C6X2D2|TRMN6_FLAB3 RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName: Full=tRNA m6A37 methyltransferase gi|255342482|gb|ACU08595.1| Methyltransferase [Flavobacteriaceae bacterium 3519-10] Length = 231 Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 41/164 (25%), Positives = 69/164 (42%), Gaps = 17/164 (10%) Query: 97 DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 D IL++GTGTG V L + +P +D++ A E+A N + + R + D Sbjct: 35 DAKNILEVGTGTGLVALMTAQRNPTSNITAIDVNPVAAELAAKNFLESHFGHRMRAMHCD 94 Query: 157 WFS-SVEGLFDVIVSNPPYIESVIV--DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213 + + + FD+I+SNPPY E+ D + R+ ++T+ Sbjct: 95 YKTFGTQKKFDLIISNPPYFETNPSEKDATARQQRELS--------------FKTLISKT 140 Query: 214 SRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGND 257 + L +G V I + + E KLFL+ YG + Sbjct: 141 AEILATEGRFCVIIPFPAGPTFEKTCEENKLFLLRRITVYGNAN 184 >gi|309800086|ref|ZP_07694280.1| methyltransferase small domain superfamily [Streptococcus infantis SK1302] gi|308116288|gb|EFO53770.1| methyltransferase small domain superfamily [Streptococcus infantis SK1302] Length = 196 Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 30/74 (40%), Positives = 47/74 (63%), Gaps = 3/74 (4%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 +ILD+G G G + L+L+K + + VDI+ +AL++A+ NAV N V QS+ + Sbjct: 60 KILDVGCGYGPIGLSLVK-AYGAQATMVDINNRALDLAQQNAVKNKVQATI--FQSNIYE 116 Query: 160 SVEGLFDVIVSNPP 173 VEG F+ ++SNPP Sbjct: 117 QVEGQFNHVISNPP 130 >gi|153003698|ref|YP_001378023.1| methyltransferase small [Anaeromyxobacter sp. Fw109-5] gi|152027271|gb|ABS25039.1| methyltransferase small [Anaeromyxobacter sp. Fw109-5] Length = 414 Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 29/93 (31%), Positives = 51/93 (54%), Gaps = 4/93 (4%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R++++GTGTG + L L + + + D+ A+ A+ NA G++ER + +++D F Sbjct: 236 RVIEVGTGTGVLALVLARAG--ARVIATDVEPAAVACARENAARLGLAERVEVVRADLFP 293 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDP 192 G D++VSNPP++ L V +DP Sbjct: 294 DGVGPADLVVSNPPWLPGEAASPLERAV--YDP 324 >gi|71024435|ref|XP_762447.1| hypothetical protein UM06300.1 [Ustilago maydis 521] gi|46097696|gb|EAK82929.1| hypothetical protein UM06300.1 [Ustilago maydis 521] Length = 721 Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 62/199 (31%), Positives = 90/199 (45%), Gaps = 33/199 (16%) Query: 31 DDRQRF-FLTNAIVRSLKHESIHRILGWRDFYNVR--LTLSSDTFEPRPETELLVDSALA 87 D R+R ++T + R+ + + +LG F +++ LT+ PRPETE ++ Sbjct: 122 DQRRRLVWMTRQMTRN--NVPLSYLLGSVPFGSLKNELTVRPPVLLPRPETEDWATQVVS 179 Query: 88 --FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF---------FKGVGVDISCKALEI 136 +L R E+ D VRI+DL TG+G C+ALL +K V D S A+EI Sbjct: 180 VLLNLSR-EQLDKVRIVDLCTGSG--CIALLVADALRTRLGAAGEWKVVACDRSPIAVEI 236 Query: 137 AKSNAVT-----NGVSERFDTLQSDWFSS---------VEGLFDVIVSNPPYIESVIVDC 182 A+ NA N +Q+D F G F +IVSNPPYI Sbjct: 237 AQENAQKLGFEINQKQSNLHIVQADIFEDGDMDRLAVIAGGPFGLIVSNPPYIPRREWAT 296 Query: 183 LGLEVRDFDPRISLDGGID 201 L EV+ + +L G D Sbjct: 297 LSNEVKQHEDPAALIGERD 315 >gi|270292559|ref|ZP_06198770.1| methyltransferase domain protein [Streptococcus sp. M143] gi|270278538|gb|EFA24384.1| methyltransferase domain protein [Streptococcus sp. M143] Length = 196 Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 34/96 (35%), Positives = 55/96 (57%), Gaps = 3/96 (3%) Query: 78 TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137 ++ +VD F L +E + +LD+G G G + L+L+K + + VDI+ +AL++A Sbjct: 38 SKKMVDFGSQFLLKCLEVNEGETVLDVGCGYGPLGLSLVK-AYGVQATMVDINNRALDLA 96 Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173 + NA N V QS+ + VEG FD ++SNPP Sbjct: 97 RQNAERNKVEATI--FQSNIYEQVEGKFDHVISNPP 130 >gi|19552425|ref|NP_600427.1| rRNA or tRNA methylase [Corynebacterium glutamicum ATCC 13032] gi|62390089|ref|YP_225491.1| rRNA or tRNA methylase [Corynebacterium glutamicum ATCC 13032] gi|145295340|ref|YP_001138161.1| hypothetical protein cgR_1280 [Corynebacterium glutamicum R] gi|21323968|dbj|BAB98594.1| Predicted rRNA or tRNA methylase [Corynebacterium glutamicum ATCC 13032] gi|25246523|gb|AAN72320.1| protoporphyrinogen oxidase [Corynebacterium glutamicum] gi|41325425|emb|CAF19905.1| Predicted rRNA or tRNA methylase [Corynebacterium glutamicum ATCC 13032] gi|140845260|dbj|BAF54259.1| hypothetical protein [Corynebacterium glutamicum R] Length = 279 Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 58/217 (26%), Positives = 89/217 (41%), Gaps = 18/217 (8%) Query: 50 SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109 + ILG + L + F PRPETE+L D A+ +EKR +I+DL TG+G Sbjct: 66 PLQHILGTAPMGPLDLHVGPGVFIPRPETEVLADWAVRQVAGDVEKR---KIVDLCTGSG 122 Query: 110 AVCL----ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVE 162 A+ AL+ + + V++ A A+ N + D + V Sbjct: 123 ALAAYIGHALIDATLY----AVELDPGAATWAQRNFDEFAPQVKLIHGDVTDPTLLAEVH 178 Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL 222 G D++VSNPPY+ D L EV DP +++ G DG+ + + L G Sbjct: 179 GTIDLVVSNPPYVPE--SDDLDPEVYQ-DPHMAVFSGADGMDVINKMVHLIFNLLKSGGA 235 Query: 223 CSVEIGYNQKVDVVRIFESRKLF-LVNAFKDYGGNDR 258 +E V ++F F + D G R Sbjct: 236 VGIEHDDTTSDAVRQVFSQHGGFGTIEVLHDLTGRAR 272 >gi|238756520|ref|ZP_04617824.1| Ribosomal RNA small subunit methyltransferase C [Yersinia ruckeri ATCC 29473] gi|238705275|gb|EEP97688.1| Ribosomal RNA small subunit methyltransferase C [Yersinia ruckeri ATCC 29473] Length = 346 Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 25/75 (33%), Positives = 45/75 (60%), Gaps = 2/75 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+LD+G G G + L K+SP K D+S A++ +++ N + + + S+ +S Sbjct: 199 RVLDVGCGAGVLASVLAKQSPKIKWTLSDVSAAAIDASRATLAANDIEA--EVIASNVYS 256 Query: 160 SVEGLFDVIVSNPPY 174 ++G FD+I+SNPP+ Sbjct: 257 DIQGRFDMIISNPPF 271 >gi|269123723|ref|YP_003306300.1| methyltransferase small [Streptobacillus moniliformis DSM 12112] gi|268315049|gb|ACZ01423.1| methyltransferase small [Streptobacillus moniliformis DSM 12112] Length = 202 Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 30/79 (37%), Positives = 47/79 (59%), Gaps = 1/79 (1%) Query: 95 KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154 K++ ++LD+G G G V L L K K V D++ +ALE+A N N V E ++ + Sbjct: 57 KKEKFKLLDIGCGYGTVTLLLSKFYKHSKYVLTDVNDRALELADINCKNNMV-EDYEIYK 115 Query: 155 SDWFSSVEGLFDVIVSNPP 173 S+ F ++ FD+I+SNPP Sbjct: 116 SNSFENIHENFDIIISNPP 134 >gi|119714639|ref|YP_921604.1| methyltransferase small [Nocardioides sp. JS614] gi|119535300|gb|ABL79917.1| methyltransferase small [Nocardioides sp. JS614] Length = 486 Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 48/144 (33%), Positives = 69/144 (47%), Gaps = 13/144 (9%) Query: 84 SALAFSLPRIEKRDVV-RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142 SA + SL ++ R+ V R LDLGTG G L L + + V D++ +AL IA+ N Sbjct: 141 SAASTSLAQLTLREPVGRALDLGTGCGVQALHLARHC--SEVVATDVNQRALRIARFNLD 198 Query: 143 TNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201 N V+ D +F V + FD+IV+NPP+ VI G + + D G+ Sbjct: 199 LNAVTTPVDVRAGSFFEPVADDTFDLIVTNPPF---VISPATGERL------VYRDSGLP 249 Query: 202 GLSHYRTIADGVSRHLNKDGLCSV 225 G I + HLN+ G C V Sbjct: 250 GDRVVEDIVRQAAAHLNEGGWCQV 273 >gi|222153103|ref|YP_002562280.1| methyltransferase [Streptococcus uberis 0140J] gi|222113916|emb|CAR42122.1| putative methyltransferase [Streptococcus uberis 0140J] Length = 196 Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 30/73 (41%), Positives = 45/73 (61%), Gaps = 3/73 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LD+G G G + ++L K + + VDI+ +A+E+AK NAV N VS QS+ + Sbjct: 61 VLDVGCGYGPLGISLAK-AQGVQATLVDINNRAIELAKKNAVINNVSATI--FQSNIYEK 117 Query: 161 VEGLFDVIVSNPP 173 V G FD ++SNPP Sbjct: 118 VSGTFDHVISNPP 130 >gi|116495718|ref|YP_807452.1| 16S RNA G1207 methylase RsmC [Lactobacillus casei ATCC 334] gi|116105868|gb|ABJ71010.1| 16S rRNA m(2)G 1207 methyltransferase [Lactobacillus casei ATCC 334] Length = 198 Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 34/96 (35%), Positives = 53/96 (55%), Gaps = 7/96 (7%) Query: 78 TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137 + +L+ + LA LP ILD+GTG G + LAL K P + D++ +AL +A Sbjct: 45 SRVLIATILAEELP------TGPILDVGTGYGPIGLALAKHFPDRQVTMSDVNERALALA 98 Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173 + NA N +S ++S + ++G F VIV+NPP Sbjct: 99 QRNATDNDIS-NVTIVESSMYDQIDGQFGVIVTNPP 133 >gi|253577170|ref|ZP_04854490.1| methyltransferase [Paenibacillus sp. oral taxon 786 str. D14] gi|251843414|gb|EES71442.1| methyltransferase [Paenibacillus sp. oral taxon 786 str. D14] Length = 201 Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 32/85 (37%), Positives = 51/85 (60%), Gaps = 5/85 (5%) Query: 93 IEKRDV---VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 IE D+ +LD+G G G + LA + + +D++ +A+E+AK NA NGV+ Sbjct: 50 IEAMDIPEDAEVLDVGCGYGPIGLAAARLATKGHVTMIDVNSRAVELAKENAAANGVNN- 108 Query: 150 FDTLQSDWFSSVEG-LFDVIVSNPP 173 L+SD FS++E FDV+++NPP Sbjct: 109 VTVLESDLFSAIENRKFDVVLTNPP 133 >gi|146310194|ref|YP_001175268.1| 16S ribosomal RNA m2G1207 methyltransferase [Enterobacter sp. 638] gi|226712951|sp|A4W687|RSMC_ENT38 RecName: Full=Ribosomal RNA small subunit methyltransferase C; AltName: Full=16S rRNA m2G1207 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rsmC gi|145317070|gb|ABP59217.1| 16S rRNA m(2)G 1207 methyltransferase [Enterobacter sp. 638] Length = 342 Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 36/122 (29%), Positives = 53/122 (43%), Gaps = 23/122 (18%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LD+G G G + L SP + D+S A+E +++ NG+ D S+ FS Sbjct: 199 KVLDVGCGAGVLSAVLASHSPKVRLTLSDVSAPAVEASRATLAANGLEG--DVFASNVFS 256 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 V G FD+I+SNPP+ DG L +T+ G RHL Sbjct: 257 EVTGRFDIIISNPPF---------------------HDGMETSLEAAQTLIRGAVRHLGS 295 Query: 220 DG 221 G Sbjct: 296 GG 297 >gi|163938109|ref|YP_001642993.1| methyltransferase small [Bacillus weihenstephanensis KBAB4] gi|163860306|gb|ABY41365.1| methyltransferase small [Bacillus weihenstephanensis KBAB4] Length = 199 Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 33/87 (37%), Positives = 51/87 (58%), Gaps = 5/87 (5%) Query: 87 AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146 AF +P ++ +LD+G G G + L+L KE + VD++ +AL +AK NA N + Sbjct: 52 AFQMPDVKGN----VLDVGCGYGPIGLSLAKEFQNREIHMVDVNERALGLAKENAANNRI 107 Query: 147 SERFDTLQSDWFSSVEGLFDVIVSNPP 173 E LQS + +V+G + VI+SNPP Sbjct: 108 -ENIRILQSSVYENVDGKYAVILSNPP 133 >gi|332970739|gb|EGK09719.1| methyltransferase domain protein [Desmospora sp. 8437] Length = 204 Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 37/97 (38%), Positives = 57/97 (58%), Gaps = 9/97 (9%) Query: 78 TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137 + LL+D+A LP + ILDLG G G V +A +P + VD++ +ALE+A Sbjct: 48 SRLLIDTA---ELP-----ERGEILDLGCGYGPVGIACSVFAPHCRVTMVDLNRRALELA 99 Query: 138 KSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPP 173 + NA NGVS + L+SD S++ + FD +++NPP Sbjct: 100 RRNAELNGVSSHVEILESDGLSALGKRRFDSVLTNPP 136 >gi|89889428|ref|ZP_01200939.1| methyltransferase [Flavobacteria bacterium BBFL7] gi|89517701|gb|EAS20357.1| methyltransferase [Flavobacteria bacterium BBFL7] Length = 240 Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 43/156 (27%), Positives = 74/156 (47%), Gaps = 10/156 (6%) Query: 94 EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER---F 150 + ++ ILD+GTGTG + L L + + +++ A E A +N S+R F Sbjct: 33 QDKNPYSILDIGTGTGVISLMLAQRFHSAQIEAIELDEDAYEQAANNFENAAWSDRMFCF 92 Query: 151 DTLQSDWFSSVEGLFDVIVSNPPYIE-SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209 ++F VE +D+I+SNPP+ + S I + +E R D + + Sbjct: 93 HASFQEFFEEVEDTYDLIISNPPFFDSSSIKNDSSIE------RNREQARFDDALPFEEL 146 Query: 210 ADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245 GV + L+ DG+ S I Y+++ ++I KLF Sbjct: 147 LYGVYKLLDDDGIFSCIIPYDRENHFLKIAAHYKLF 182 >gi|148827172|ref|YP_001291925.1| 16S ribosomal RNA m2G1207 methyltransferase [Haemophilus influenzae PittGG] gi|226712956|sp|A5UFI6|RSMC_HAEIG RecName: Full=Ribosomal RNA small subunit methyltransferase C; AltName: Full=16S rRNA m2G1207 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rsmC gi|148718414|gb|ABQ99541.1| 16S ribosomal RNA m2G1207 methyltransferase [Haemophilus influenzae PittGG] Length = 330 Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 45/168 (26%), Positives = 75/168 (44%), Gaps = 29/168 (17%) Query: 57 WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116 WR + + L + P + +D+ L I+ + ++LDLG G G + + Sbjct: 150 WRTYQHSTLENLTIYSLPGVFSAAELDTGTELLLSTIDNKIKGKVLDLGCGAGVIGSMIK 209 Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE 176 K +P + DI ALE A+ N + + + SD FS +EG FD+I+SNPP+ + Sbjct: 210 KRAPNAQITMTDIHAMALESARKTLSENQL--QGEVYASDVFSDIEGKFDLIISNPPFHD 267 Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR---HLNKDG 221 GID + YRT+ + +++ HLN+ G Sbjct: 268 ----------------------GID--TAYRTVKELITQAKWHLNQGG 291 >gi|310792351|gb|EFQ27878.1| HemK family methyltransferase [Glomerella graminicola M1.001] Length = 342 Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 63/223 (28%), Positives = 98/223 (43%), Gaps = 38/223 (17%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETEL----LVDSALAFSLPRIEKRDVVRILDLGT 106 + +LG + F + + PR ETE L + ++ LP + R + RI+D T Sbjct: 70 LQYVLGSQPFGALDIRCRPGVLAPRAETEAYALHLTEMIVSGRLPHPQDRGL-RIVDFCT 128 Query: 107 GTGAVCLALL----KESPFFKGVGVDISCKALEIAKSN--------AVTNGVSERFDTLQ 154 GTG + LAL + + GVD+S A+ +++ N A+ E+ + Q Sbjct: 129 GTGCIALALYEGLARRAARLSVTGVDVSPTAVRLSRENLRHNAGAGALLRPTEEKNVSFQ 188 Query: 155 -SDWFSSVE----GLFDVIVSNPPYIESVIVDC----LGLEVRDFDPRISLDGG-----I 200 +D F D++VSNPPYI + +G VR ++PR++L G Sbjct: 189 LADVFDEAAMATIPQCDILVSNPPYISRKVWTYGRGQMGYSVRKYEPRLALVPGDTTPTY 248 Query: 201 DGLSH----YRTIADGVSRHLNKDGLCSVEIG-YNQKVDVVRI 238 DG H Y + D V+R L L E+G Q V V R+ Sbjct: 249 DGCDHADVFYARLLD-VARRLRPKVLL-FEVGDQEQAVRVARL 289 >gi|308185569|ref|YP_003929700.1| ribosomal RNA small subunit methyltransferase [Pantoea vagans C9-1] gi|308056079|gb|ADO08251.1| ribosomal RNA small subunit methyltransferase [Pantoea vagans C9-1] Length = 379 Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 42/157 (26%), Positives = 66/157 (42%), Gaps = 27/157 (17%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 +DS A L ++LD+G G G + +L SP + D+ A+E +K Sbjct: 217 LDSGSALLLSTFTPHTKGKVLDMGCGAGVIAASLPARSPKVRLWLCDVHAAAIEASKLTL 276 Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201 NG+ + S+ FS V G FD+I+SNPP+ E + SLD Sbjct: 277 AANGIEG--EVFASNVFSDVTGRFDMIISNPPFHEGT--------------QTSLDAA-- 318 Query: 202 GLSHYRTIADGVSRHLNKDG----LCSVEIGYNQKVD 234 + + G +HLN G + + + Y Q +D Sbjct: 319 -----QALIRGAVKHLNTGGELRIVANTFLPYPQALD 350 >gi|229009610|ref|ZP_04166836.1| hypothetical protein bmyco0001_860 [Bacillus mycoides DSM 2048] gi|229131108|ref|ZP_04260020.1| hypothetical protein bcere0014_860 [Bacillus cereus BDRD-ST196] gi|228652321|gb|EEL08246.1| hypothetical protein bcere0014_860 [Bacillus cereus BDRD-ST196] gi|228751632|gb|EEM01432.1| hypothetical protein bmyco0001_860 [Bacillus mycoides DSM 2048] Length = 213 Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 35/96 (36%), Positives = 56/96 (58%), Gaps = 8/96 (8%) Query: 78 TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137 + LL++ AF +P ++ +LD+G G G + L+L KE + VD++ +AL +A Sbjct: 60 SRLLIE---AFQMPDVKGN----VLDVGCGYGPIGLSLAKEFQNREIHMVDVNERALGLA 112 Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173 K NA N + E LQS + +V+G + VI+SNPP Sbjct: 113 KENAANNRI-ENIRILQSSVYENVDGKYAVILSNPP 147 >gi|319441592|ref|ZP_07990748.1| putative transferase [Corynebacterium variabile DSM 44702] Length = 552 Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 45/129 (34%), Positives = 66/129 (51%), Gaps = 19/129 (14%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA----KSNAVTNGVSERFDTLQS 155 R+LDLGTG+G + L+L + + V DI +AL+ A +S T+G D + Sbjct: 192 RLLDLGTGSGVLALSLDAD----EVVATDIHGRALDFARASERSGLRTSGERRPVDWREG 247 Query: 156 DWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214 +WF V+G FD IVSNPP++ V + +G RD + LDG R +A G + Sbjct: 248 NWFGPVDGEYFDRIVSNPPFV--VGIGEVGHVYRDSG--LELDGA------SRLVAAGAA 297 Query: 215 RHLNKDGLC 223 HL+ G Sbjct: 298 GHLSPGGTA 306 >gi|317493748|ref|ZP_07952165.1| methyltransferase small domain-containing protein [Enterobacteriaceae bacterium 9_2_54FAA] gi|316918075|gb|EFV39417.1| methyltransferase small domain-containing protein [Enterobacteriaceae bacterium 9_2_54FAA] Length = 346 Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 29/85 (34%), Positives = 48/85 (56%), Gaps = 2/85 (2%) Query: 90 LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 L +E ++LD+G G G + A+ K SP K D+S ALE +++ N + + Sbjct: 189 LSSLEPHMKGKVLDVGCGAGVLSAAMAKMSPKVKLTLTDVSAAALESSRATLAANDI--Q 246 Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPY 174 + + S+ +S V G FD+I+SNPP+ Sbjct: 247 GEVIASNVYSDVNGRFDMIISNPPF 271 >gi|253988662|ref|YP_003040018.1| modification methylase hemk [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|211638014|emb|CAR66642.1| modification methylase hemk precursor [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253780112|emb|CAQ83273.1| modification methylase hemk precursor [Photorhabdus asymbiotica] Length = 283 Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 60/234 (25%), Positives = 94/234 (40%), Gaps = 12/234 (5%) Query: 32 DRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLP 91 DR R A+ + I+G DF + LT+ + F PRP ++++ S Sbjct: 44 DRARDEFMLAVHERCNRIPLGHIVGAVDFDGLPLTIGTGIFIPRPHSQIIHKWLENES-- 101 Query: 92 RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA--VTNGV--S 147 + +LDL +G+GA+ LA+ K P K V+ A + N + N + Sbjct: 102 --QVPQGATVLDLCSGSGAIGLAIAKYRPDLKVTCVEYDDVAFQYLTRNINRLANWAIKA 159 Query: 148 ERFDTLQSDW--FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSH 205 E DW FS +IV+NPPY+ + E + P S+ G DGL Sbjct: 160 EALKADLWDWQAFSHFNESVGLIVANPPYVPE--QQTILPEWEEHHPYTSVYSGNDGLDL 217 Query: 206 YRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRV 259 R I + L +G +E G +Q V +F L+ D +D+ Sbjct: 218 TRLIIKQARQLLQLNGWLVIEHGESQGERVRALFSDAGFSLIRTIIDEDISDKT 271 >gi|294791499|ref|ZP_06756656.1| putative methyltransferase small domain protein [Scardovia inopinata F0304] gi|294457970|gb|EFG26324.1| putative methyltransferase small domain protein [Scardovia inopinata F0304] Length = 243 Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 39/129 (30%), Positives = 65/129 (50%), Gaps = 13/129 (10%) Query: 78 TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137 T++L D + + E R V LDLG G G + LAL +E P + +D + +A+E+ Sbjct: 69 TQVLFDHVPGSAADQAEGRTVATCLDLGCGWGPISLALAREYPQARVWALDSNERAVELT 128 Query: 138 KSNAVTNGVS--------ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRD 189 ++NA NG++ + D ++W + FD+I SNPP + D L + Sbjct: 129 QANANRNGLTTIAAGTRQDLEDRYGAEW---TDASFDLIWSNPPI--RIGKDPLHNLLMT 183 Query: 190 FDPRISLDG 198 + PR+S +G Sbjct: 184 YLPRLSSNG 192 >gi|293476634|ref|ZP_06665042.1| rsmC [Escherichia coli B088] gi|291321087|gb|EFE60529.1| rsmC [Escherichia coli B088] Length = 343 Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 36/122 (29%), Positives = 58/122 (47%), Gaps = 23/122 (18%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LD+G G G + +A SP + D+S A+E +++ N V + S+ FS Sbjct: 199 KVLDVGCGAGVLSVAFALHSPKIRLTLCDVSAPAVEASRATLAANCVEG--EVFASNVFS 256 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 V+G FD+I+SNPP+ + + + SLD +T+ G RHLN Sbjct: 257 EVKGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 295 Query: 220 DG 221 G Sbjct: 296 GG 297 >gi|326202932|ref|ZP_08192799.1| Methyltransferase type 11 [Clostridium papyrosolvens DSM 2782] gi|325987009|gb|EGD47838.1| Methyltransferase type 11 [Clostridium papyrosolvens DSM 2782] Length = 244 Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 8/81 (9%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD--- 156 ++LD+GTGTG + + L ++ K VG++I + E+A + N +SER + +Q D Sbjct: 47 KVLDIGTGTGIIPVLLAGKTKAAKIVGLEIQEEMAEMASRSVTLNQLSERLEIVQGDIKL 106 Query: 157 ---WFSSVEGLFDVIVSNPPY 174 +F FDV+VSNPPY Sbjct: 107 YREYFGKSS--FDVVVSNPPY 125 >gi|229157069|ref|ZP_04285150.1| Modification methylase, HemK [Bacillus cereus ATCC 4342] gi|228626559|gb|EEK83305.1| Modification methylase, HemK [Bacillus cereus ATCC 4342] Length = 260 Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 57/194 (29%), Positives = 84/194 (43%), Gaps = 6/194 (3%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110 + ++G+ F +R+ + F PR TE LV A A S D+V +DL G+GA Sbjct: 51 LEYVVGYAKFCGMRIEVERGVFVPRQRTEFLVHQAEALSC----FGDIV--VDLCCGSGA 104 Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170 V AL + VDI A+ A N + G L S++G I++ Sbjct: 105 VGAALAAALGRVELYCVDIDPIAVRCASRNVTSFGGHVFEGDLYKSLPHSLKGNVKTILA 164 Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230 N PY+ + + L E R +P+++LDGG DGL R +A L G +E Sbjct: 165 NAPYVPTDAIKLLPQEARLHEPKVALDGGEDGLDIQRRVAKEAFLWLAPGGHLLIETSEM 224 Query: 231 QKVDVVRIFESRKL 244 Q IF +L Sbjct: 225 QADQTFEIFAGAEL 238 >gi|317473411|ref|ZP_07932705.1| methyltransferase type 11 [Anaerostipes sp. 3_2_56FAA] gi|316899061|gb|EFV21081.1| methyltransferase type 11 [Anaerostipes sp. 3_2_56FAA] Length = 240 Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 31/98 (31%), Positives = 54/98 (55%), Gaps = 6/98 (6%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 +D+ L S +++K +LDLGTGTG + + + ++P G++I + E+A +A Sbjct: 22 MDAVLLSSFVKVKKNG--NVLDLGTGTGILPILMEAKTPGRHFTGLEIQSEMAEMAARSA 79 Query: 142 VTNGVSERFDTLQSDWFSS----VEGLFDVIVSNPPYI 175 NG+ E+ + ++ D + FDVI SNPPY+ Sbjct: 80 ALNGLEEKIEIVEGDITKASAIFSHDSFDVITSNPPYM 117 >gi|14520648|ref|NP_126123.1| hypothetical protein PAB0284 [Pyrococcus abyssi GE5] gi|5457864|emb|CAB49354.1| Predicted rRNA or tRNA methylase [Pyrococcus abyssi GE5] Length = 197 Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 41/116 (35%), Positives = 68/116 (58%), Gaps = 10/116 (8%) Query: 61 YN-VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119 YN +R+ + +EP +T LL ++ L + + D+V LD+GTG+G + L K++ Sbjct: 5 YNGLRIEVEESVYEPAEDTFLLAEALLE----EVREDDIV--LDVGTGSGILALLAAKKA 58 Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYI 175 F VG+DI+ KA+++A NA NG+ + SD F ++ G F +I+ NPPY+ Sbjct: 59 KFV--VGLDINEKAIDLAWRNAQLNGIKNVVFVV-SDLFRNLRGKFTLILFNPPYL 111 >gi|326927696|ref|XP_003210027.1| PREDICTED: hemK methyltransferase family member 1-like [Meleagris gallopavo] Length = 360 Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 48/165 (29%), Positives = 74/165 (44%), Gaps = 44/165 (26%) Query: 44 RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLV--------------DSALAFS 89 + L+ + +LG DF ++ L + F PRPETE L+ +SA + Sbjct: 112 KRLERMPVQYVLGEWDFQDLNLKMRPPVFIPRPETEDLISLVVEEESWKCKAKNSAFLVA 171 Query: 90 LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN--------A 141 +P IL++G G+GA+ L+LL + P + + VD A+++ + N A Sbjct: 172 VPS------PVILEIGCGSGAIALSLLCKIPQSRVLAVDKEEAAVDLTRENVHSLSCNQA 225 Query: 142 VTN-----GVSERFDTLQSD------WFSSVEGLFDVIVSNPPYI 175 VT+ G+S F Q W G D IVSNPPY+ Sbjct: 226 VTSTSFQIGISLLFQECQGSAKHLLPW-----GPVDFIVSNPPYV 265 >gi|281422532|ref|ZP_06253531.1| SAM-dependent methyltransferase [Prevotella copri DSM 18205] gi|281403356|gb|EFB34036.1| SAM-dependent methyltransferase [Prevotella copri DSM 18205] Length = 247 Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 48/164 (29%), Positives = 76/164 (46%), Gaps = 30/164 (18%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN--------------- 144 RILD+G+GTG + L + + P + VG+D+ A A+ N + + Sbjct: 36 RILDIGSGTGLISLMMAQRFPEAEVVGIDMDADACGQARENVMASPFRDRVEIECCRLQD 95 Query: 145 --GVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202 G SE + L++ G+FD IVSNPP+ VD L ++ D + ++ D Sbjct: 96 FGGTSEAAEALETADGLKAAGVFDAIVSNPPF----FVDSL----KNPDSKRTMARHTDS 147 Query: 203 LSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246 L +R + GV R L+ DG+ S + V+VV F + L Sbjct: 148 LP-FRDLFAGVKRLLSDDGIFSAIV----PVEVVEQFVAESCIL 186 >gi|311281054|ref|YP_003943285.1| rRNA (guanine-N(2)-)-methyltransferase [Enterobacter cloacae SCF1] gi|308750249|gb|ADO50001.1| rRNA (guanine-N(2)-)-methyltransferase [Enterobacter cloacae SCF1] Length = 342 Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 36/122 (29%), Positives = 52/122 (42%), Gaps = 23/122 (18%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LD+G G G + L SP + D+S A+E +++ NG D S+ FS Sbjct: 199 KVLDVGCGAGVLAAVLASHSPKVRLTLCDVSAPAVEASRATLAANGFEG--DVFASNVFS 256 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 V G FD+I+SNPP+ DG L + + G RHLN Sbjct: 257 EVTGRFDMIISNPPF---------------------HDGLQTSLEAAQALIRGAVRHLNS 295 Query: 220 DG 221 G Sbjct: 296 GG 297 >gi|328887293|emb|CCA60532.1| Uncharacterized methyltransferase [Streptomyces venezuelae ATCC 10712] Length = 229 Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 38/108 (35%), Positives = 58/108 (53%), Gaps = 10/108 (9%) Query: 72 FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131 + P+ +T LL ++ L R E +LD+GTG LAL + V VD+S Sbjct: 23 YSPQADTRLLAEA-----LSREELDATTDVLDIGTG--TGALALCAARTGARVVAVDVSW 75 Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESV 178 +A+ AK NA+ G +R L D+ + V+G FD+I++NPPY+ S Sbjct: 76 RAVIAAKLNAIRQG--QRLRVLHGDFSTRVQGRRFDLILTNPPYVPSA 121 >gi|260596377|ref|YP_003208948.1| 16S ribosomal RNA m2G1207 methyltransferase [Cronobacter turicensis z3032] gi|260215554|emb|CBA27754.1| Ribosomal RNA small subunit methyltransferase C [Cronobacter turicensis z3032] Length = 342 Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 26/75 (34%), Positives = 44/75 (58%), Gaps = 2/75 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LD+G GTG + L SP + D+S A+E +++ NG + + S+ FS Sbjct: 199 KVLDVGCGTGVLAAVLASHSPKVRLTLCDVSAPAVEASRATLAANGFEG--EVIASNVFS 256 Query: 160 SVEGLFDVIVSNPPY 174 ++G FD+I+SNPP+ Sbjct: 257 EIKGRFDMIISNPPF 271 >gi|319896430|ref|YP_004134623.1| ribosomal RNA small subunit methyltransferase c [Haemophilus influenzae F3031] gi|317431932|emb|CBY80280.1| ribosomal RNA small subunit methyltransferase C [Haemophilus influenzae F3031] Length = 330 Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 41/142 (28%), Positives = 66/142 (46%), Gaps = 29/142 (20%) Query: 83 DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142 D+ L I+ + ++LDLG G G + + K +P + DI ALE A+ Sbjct: 176 DTGTELLLSTIDNKIKGKVLDLGCGAGVIGSMIKKRAPNAQITMTDIHAMALESARKTLS 235 Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202 N + + + SD FS +EG FD+I+SNPP+ + GID Sbjct: 236 ENQL--QGEVYASDVFSDIEGKFDLIISNPPFHD----------------------GID- 270 Query: 203 LSHYRTIADGVSR---HLNKDG 221 + YRT+ + +++ HLN+ G Sbjct: 271 -TAYRTVKELITQAKWHLNQGG 291 >gi|212637945|ref|YP_002314465.1| 16S RNA G1207 methylase RsmC [Anoxybacillus flavithermus WK1] gi|212559425|gb|ACJ32480.1| 16S RNA G1207 methylase RsmC [Anoxybacillus flavithermus WK1] Length = 202 Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 31/73 (42%), Positives = 42/73 (57%), Gaps = 1/73 (1%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 ILD+G G G + LAL K+ P +D++ +A+E+AK N N + E SD F Sbjct: 65 ILDVGCGYGPIGLALAKDFPHRMVHMIDVNERAIELAKKNKQQNDI-ENVRIYISDLFQR 123 Query: 161 VEGLFDVIVSNPP 173 VEG F IV+NPP Sbjct: 124 VEGKFAAIVTNPP 136 >gi|320539924|ref|ZP_08039583.1| putative 16S rRNA m(2)G1207 methyltransferase [Serratia symbiotica str. Tucson] gi|320030110|gb|EFW12130.1| putative 16S rRNA m(2)G1207 methyltransferase [Serratia symbiotica str. Tucson] Length = 348 Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 30/93 (32%), Positives = 52/93 (55%), Gaps = 2/93 (2%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 +D+ A L +E ++LD+G G G V L K SP K D+S AL+ +++ Sbjct: 181 LDTGSALLLSTLENSMQGKVLDVGCGAGVVAAVLAKLSPKVKLTLSDVSAAALDSSRATL 240 Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174 N + + + + S+ +S++ G FD+I+SNPP+ Sbjct: 241 AANSI--KGEVIVSNVYSNITGRFDMIISNPPF 271 >gi|218884457|ref|YP_002428839.1| Ribosomal RNA small subunit methyltransferase C (RRNA (Guanine-n2-)- methyltransferase) [Desulfurococcus kamchatkensis 1221n] gi|218766073|gb|ACL11472.1| Ribosomal RNA small subunit methyltransferase C (RRNA (Guanine-n2-)- methyltransferase) [Desulfurococcus kamchatkensis 1221n] Length = 200 Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 1/74 (1%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LD+G G G + + + K +P + D++ A+++A+ NA N V +R LQ D + Sbjct: 65 VLDIGCGYGVIGIVVAKLNPLLEVYMTDVNPLAVKVARLNASRNNVEDRVVVLQGDRYKP 124 Query: 161 VEGL-FDVIVSNPP 173 VEG+ F+ I SNPP Sbjct: 125 VEGMKFNAIYSNPP 138 >gi|116493224|ref|YP_804959.1| 16S RNA G1207 methylase RsmC [Pediococcus pentosaceus ATCC 25745] gi|116103374|gb|ABJ68517.1| 16S rRNA m(2)G 1207 methyltransferase [Pediococcus pentosaceus ATCC 25745] Length = 201 Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 30/90 (33%), Positives = 52/90 (57%), Gaps = 7/90 (7%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 +ILD+G G G + ++L K P + D++ +AL +AK NAV N V ++ +SD + Sbjct: 61 KILDVGCGYGPIGISLAKSFPEIQVQMTDVNERALGLAKRNAVANSVEKQTQIYKSDAYE 120 Query: 160 SVEGL-FDVIVSNPP------YIESVIVDC 182 +++ F I+SNPP +E++IV+ Sbjct: 121 NIDDTDFTTIISNPPVRAGKSVVETIIVEA 150 >gi|147919486|ref|YP_686774.1| protoporphyrinogen oxidase-related protein (HemK-like) [uncultured methanogenic archaeon RC-I] gi|110622170|emb|CAJ37448.1| protoporphyrinogen oxidase-related protein (HemK-like) [uncultured methanogenic archaeon RC-I] Length = 193 Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 52/166 (31%), Positives = 77/166 (46%), Gaps = 26/166 (15%) Query: 58 RDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117 R + + L ++P ++ LLV++AL + R ++L++GTG+G V Sbjct: 4 RIYRDKEFELLEGVYDPGDDSFLLVEAALK------DIRAGEKVLEVGTGSGVV------ 51 Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIES 177 S F K V I+ IA NA NGV + +++D FS + G FDVI+ NPPY+ + Sbjct: 52 -SFFVKDVTRVIATDINPIACQNARLNGV----EVVRTDLFSGICGQFDVIIFNPPYLPT 106 Query: 178 VIVDCLGLEVRDFDPRI--SLDGGIDGLSHYRTIADGVSRHLNKDG 221 E D + + DGG DG R GV R L G Sbjct: 107 S-------EDEKLDTWLNRAFDGGPDGRDVIRQFLAGVKRILPIGG 145 >gi|229027949|ref|ZP_04184102.1| hypothetical protein bcere0028_880 [Bacillus cereus AH1271] gi|228733337|gb|EEL84166.1| hypothetical protein bcere0028_880 [Bacillus cereus AH1271] Length = 213 Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 30/73 (41%), Positives = 44/73 (60%), Gaps = 1/73 (1%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 ILD+G G G + L+L KE K VD++ +ALE+AK NA N + QS + + Sbjct: 76 ILDVGCGYGPIGLSLAKEFQDRKVHMVDVNERALELAKENAANNRIGN-VHIFQSSVYEN 134 Query: 161 VEGLFDVIVSNPP 173 V+G++ I+SNPP Sbjct: 135 VDGMYAAILSNPP 147 >gi|319774960|ref|YP_004137448.1| ribosomal RNA small subunit methyltransferase C [Haemophilus influenzae F3047] gi|329123138|ref|ZP_08251708.1| rRNA (guanine-N(2)-)-methyltransferase [Haemophilus aegyptius ATCC 11116] gi|317449551|emb|CBY85756.1| ribosomal RNA small subunit methyltransferase C [Haemophilus influenzae F3047] gi|327471693|gb|EGF17135.1| rRNA (guanine-N(2)-)-methyltransferase [Haemophilus aegyptius ATCC 11116] Length = 330 Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 40/143 (27%), Positives = 68/143 (47%), Gaps = 29/143 (20%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 +D+ L I+ + +++DLG G G + + K +P + DI ALE A+ Sbjct: 175 LDTGTELLLSTIDNKIKGKVIDLGCGAGVIGSMIKKRAPNAQITMTDIHAMALESARKTL 234 Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201 N + + + SD FS++EG FD+I+SNPP+ + GID Sbjct: 235 SENQL--QGEVYASDVFSNIEGKFDLIISNPPFHD----------------------GID 270 Query: 202 GLSHYRTIADGVSR---HLNKDG 221 + YRT+ + +++ HLN+ G Sbjct: 271 --TAYRTVKELITQAKWHLNQGG 291 >gi|304396475|ref|ZP_07378356.1| rRNA (guanine-N(2)-)-methyltransferase [Pantoea sp. aB] gi|304355984|gb|EFM20350.1| rRNA (guanine-N(2)-)-methyltransferase [Pantoea sp. aB] Length = 343 Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 39/140 (27%), Positives = 59/140 (42%), Gaps = 23/140 (16%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 +DS A L ++LD+G G G + +L SP + D+ A+E +K Sbjct: 181 LDSGSALLLSTFTPHTKGKVLDMGCGAGVIAASLPARSPKVRLWLCDVHAAAIEASKLTL 240 Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201 NG+ + S+ FS V G FD+I+SNPP+ E + SLD Sbjct: 241 AANGIEG--EVFASNVFSDVTGRFDMIISNPPFHEGT--------------QTSLDAA-- 282 Query: 202 GLSHYRTIADGVSRHLNKDG 221 + + G +HLN G Sbjct: 283 -----QALIRGAVKHLNTGG 297 >gi|229100900|ref|ZP_04231704.1| hypothetical protein bcere0019_1050 [Bacillus cereus Rock3-28] gi|228682479|gb|EEL36552.1| hypothetical protein bcere0019_1050 [Bacillus cereus Rock3-28] Length = 199 Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 33/87 (37%), Positives = 51/87 (58%), Gaps = 5/87 (5%) Query: 87 AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146 AF +P ++ +LD+G G G + L+L KE + VD++ +AL +AK NA N + Sbjct: 52 AFQMPDVKGN----VLDVGCGYGPIGLSLAKEFQDREIHMVDVNERALGLAKENAANNKI 107 Query: 147 SERFDTLQSDWFSSVEGLFDVIVSNPP 173 E LQS + +V+G + VI+SNPP Sbjct: 108 -ENVRILQSSVYENVDGKYAVILSNPP 133 >gi|229094823|ref|ZP_04225828.1| hypothetical protein bcere0020_890 [Bacillus cereus Rock3-29] gi|229113777|ref|ZP_04243212.1| hypothetical protein bcere0017_900 [Bacillus cereus Rock1-3] gi|228669648|gb|EEL25055.1| hypothetical protein bcere0017_900 [Bacillus cereus Rock1-3] gi|228688566|gb|EEL42439.1| hypothetical protein bcere0020_890 [Bacillus cereus Rock3-29] Length = 213 Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 35/96 (36%), Positives = 56/96 (58%), Gaps = 8/96 (8%) Query: 78 TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137 + LL++ AF +P ++ +LD+G G G + L+L KE + VD++ +AL +A Sbjct: 60 SRLLIE---AFQMPDVKGN----VLDVGCGYGPIGLSLAKEFQDREIHMVDVNERALGLA 112 Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173 K NA N + E LQS + +V+G + VI+SNPP Sbjct: 113 KENAANNKI-ENVRILQSSVYENVDGKYAVILSNPP 147 >gi|159026766|emb|CAO89053.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 396 Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 36/91 (39%), Positives = 50/91 (54%), Gaps = 6/91 (6%) Query: 84 SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143 +A F R +R+ +RILD G GTGA LL +PF V +DIS KALEIAK Sbjct: 41 AAYNFCCHRKPEREDIRILDAGCGTGAGTEYLLALNPFANIVAIDISEKALEIAKERCNR 100 Query: 144 NGVSER------FDTLQSDWFSSVEGLFDVI 168 +GV+ + F L + +++ G FD+I Sbjct: 101 SGVAPKHRGSLDFHHLPLESATNLPGEFDLI 131 >gi|254240607|ref|ZP_04933929.1| hypothetical protein PA2G_01266 [Pseudomonas aeruginosa 2192] gi|126193985|gb|EAZ58048.1| hypothetical protein PA2G_01266 [Pseudomonas aeruginosa 2192] Length = 316 Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 40/113 (35%), Positives = 59/113 (52%), Gaps = 8/113 (7%) Query: 66 TLSSDTFEPRPET---ELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 TL++D P+T + L+ S LA S P + R D+G G G + + P Sbjct: 106 TLAADAVFFGPDTYRFDRLIRSHLASSDPA----RIRRAADIGCGAGPGAIRIAMACPDA 161 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYI 175 + G+DI+ AL++A+ NA GV +SD S V G FD+IV+NPPY+ Sbjct: 162 EVHGLDINPAALDLARVNAALAGVGN-LTLARSDLLSQVPGRFDLIVANPPYL 213 >gi|219871403|ref|YP_002475778.1| phosphatidylserine synthase [Haemophilus parasuis SH0165] gi|262828453|sp|B8F678|TRMN6_HAEPS RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName: Full=tRNA m6A37 methyltransferase gi|219691607|gb|ACL32830.1| phosphatidylserine synthase [Haemophilus parasuis SH0165] Length = 235 Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 31/80 (38%), Positives = 45/80 (56%), Gaps = 5/80 (6%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD--- 156 ILDLGTGTG + + L + + + +++ A A+ NA + R D LQ+D Sbjct: 38 HILDLGTGTGLIAIMLAQRTASAQITALELEENAFHQAQENAQRCPWNNRIDVLQADIMT 97 Query: 157 WFSSVEGLFDVIVSNPPYIE 176 W S+ + FD+IVSNPPY E Sbjct: 98 WKSTKK--FDLIVSNPPYFE 115 >gi|116619371|ref|YP_821527.1| methyltransferase small [Candidatus Solibacter usitatus Ellin6076] gi|116222533|gb|ABJ81242.1| methyltransferase small [Candidatus Solibacter usitatus Ellin6076] Length = 519 Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 43/123 (34%), Positives = 65/123 (52%), Gaps = 17/123 (13%) Query: 101 ILDLGTGTGAVCLALLKESPFFK-GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 +LD+GTG+G +A L + + + G DI+ ++++ A+ N NG+ + LQ D + Sbjct: 181 LLDVGTGSG---IAALDGARYARHAWGTDIAARSVQFAEFNRRLNGI-QNATMLQGDLYV 236 Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 VEGL FD IV++PPY+ VR + I DGG DG R I +G+ R L Sbjct: 237 PVEGLTFDRIVAHPPYV----------PVRK-NELIFRDGGEDGEQILRRIVEGLPRFLR 285 Query: 219 KDG 221 G Sbjct: 286 PGG 288 >gi|227533723|ref|ZP_03963772.1| methyltransferase [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|227188707|gb|EEI68774.1| methyltransferase [Lactobacillus paracasei subsp. paracasei ATCC 25302] Length = 198 Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 34/96 (35%), Positives = 53/96 (55%), Gaps = 7/96 (7%) Query: 78 TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137 + +L+ + LA LP ILD+GTG G + LAL K P + D++ +AL +A Sbjct: 45 SRVLIATILADELP------AGPILDVGTGYGPIGLALAKRFPDRQVTMSDVNERALALA 98 Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173 + NA N +S ++S + ++G F VIV+NPP Sbjct: 99 QRNATDNDIS-NVTIVESSMYDQIDGQFGVIVTNPP 133 >gi|145630697|ref|ZP_01786476.1| 16S ribosomal RNA m2G1207 methyltransferase [Haemophilus influenzae R3021] gi|144983823|gb|EDJ91273.1| 16S ribosomal RNA m2G1207 methyltransferase [Haemophilus influenzae R3021] Length = 330 Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 31/97 (31%), Positives = 51/97 (52%), Gaps = 2/97 (2%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 +D+ L I+ + ++LDLG G G + + K +P + DI ALE A+ Sbjct: 175 LDTGTELLLSTIDNKIKGKVLDLGCGAGVIGSTIKKRAPNAQITMTDIHAMALESARKTL 234 Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESV 178 N + + + SD FS +EG FD+I+SNPP+ + + Sbjct: 235 SENQL--QGEVYASDVFSDIEGKFDLIISNPPFHDGI 269 >gi|172040576|ref|YP_001800290.1| putative transferase [Corynebacterium urealyticum DSM 7109] gi|171851880|emb|CAQ04856.1| putative transferase [Corynebacterium urealyticum DSM 7109] Length = 589 Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 36/89 (40%), Positives = 47/89 (52%), Gaps = 13/89 (14%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA---------VTNGVSER- 149 RILDLG G GA+ LAL P VG DIS +AL+ A N ++ GV+ Sbjct: 214 RILDLGCGGGALSLALQLAYPEAHVVGTDISGRALDFAAINGTQLAQAQGQLSTGVAAPE 273 Query: 150 --FDTLQSDWFSSVEG-LFDVIVSNPPYI 175 + + WF V G FD+IVSNPP++ Sbjct: 274 SCIEWREGSWFEPVAGERFDLIVSNPPFV 302 >gi|327459751|gb|EGF06091.1| methyltransferase domain protein [Streptococcus sanguinis SK1057] Length = 195 Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 31/74 (41%), Positives = 44/74 (59%), Gaps = 3/74 (4%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+LD+G G G + L L K + VDI+ +AL++A+ NA N VS QS+ + Sbjct: 60 RVLDVGCGYGPLGLTLAK-AQGVTATMVDINQRALDLAQKNAERNQVSAHI--FQSNVYE 116 Query: 160 SVEGLFDVIVSNPP 173 V G+FD I+SNPP Sbjct: 117 KVNGIFDHIISNPP 130 >gi|229074162|ref|ZP_04207208.1| hypothetical protein bcere0024_880 [Bacillus cereus Rock4-18] gi|228708932|gb|EEL61059.1| hypothetical protein bcere0024_880 [Bacillus cereus Rock4-18] Length = 199 Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 33/87 (37%), Positives = 51/87 (58%), Gaps = 5/87 (5%) Query: 87 AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146 AF +P ++ +LD+G G G + L+L KE + VD++ +AL +AK NA N + Sbjct: 52 AFEMPDVKGN----VLDVGCGYGPIGLSLAKEFQDREIHMVDVNERALGLAKENAANNKI 107 Query: 147 SERFDTLQSDWFSSVEGLFDVIVSNPP 173 E LQS + +V+G + VI+SNPP Sbjct: 108 -ENVRILQSSVYENVDGKYAVILSNPP 133 >gi|119873045|ref|YP_931052.1| methyltransferase small [Pyrobaculum islandicum DSM 4184] gi|119674453|gb|ABL88709.1| methyltransferase small [Pyrobaculum islandicum DSM 4184] Length = 225 Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 44/142 (30%), Positives = 63/142 (44%), Gaps = 11/142 (7%) Query: 35 RFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIE 94 R + A +R L S + +RD L + F P V +ALA S I+ Sbjct: 3 RAEIARAALRILHAASPAAVYRFRDMA---LYIPRGVFNP----VFAVSTALAIS--HID 53 Query: 95 KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154 R R+ DLGTG+GA+ +AL K DIS AL A+ NA N V+ + Sbjct: 54 ARG--RVADLGTGSGAIAIALAKSPQVETVCAYDISPLALATARVNAEINRVAHKVAICP 111 Query: 155 SDWFSSVEGLFDVIVSNPPYIE 176 + +DV+ +NPPY+ Sbjct: 112 TRKALLAAAPYDVVTANPPYLP 133 >gi|199599024|ref|ZP_03212431.1| 16S RNA G1207 methylase RsmC [Lactobacillus rhamnosus HN001] gi|199590060|gb|EDY98159.1| 16S RNA G1207 methylase RsmC [Lactobacillus rhamnosus HN001] Length = 198 Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 32/96 (33%), Positives = 53/96 (55%), Gaps = 7/96 (7%) Query: 78 TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137 + +L+ + LA +LP ILD+G G G + LAL K P + D++ +AL +A Sbjct: 45 SRVLIATVLAETLPDGP------ILDVGAGYGPIGLALAKHFPNRQVTMSDVNERALALA 98 Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173 K NA NG++ ++S + ++ F V+V+NPP Sbjct: 99 KQNAADNGITN-VSIIESSMYDGIDDQFAVVVTNPP 133 >gi|190344541|gb|EDK36231.2| hypothetical protein PGUG_00329 [Meyerozyma guilliermondii ATCC 6260] Length = 323 Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 48/177 (27%), Positives = 84/177 (47%), Gaps = 18/177 (10%) Query: 39 TNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD- 97 T A R + + ILG + F + + + PR ETE V L +EK Sbjct: 82 TWAAKRRSRLVPLQYILGSQPFGELTILCKENVLIPRWETEEWVGHLLNI----LEKNSK 137 Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN----GVSERFDTL 153 ++++D+ TGTG + LA+ + P + G+D+S A+E+ K N GVS L Sbjct: 138 SLKVVDVCTGTGCIPLAIKHKRPQDEVCGIDVSETAIELCKENLALYSRDFGVSSTISFL 197 Query: 154 QSDWFSS-VEGLF--DVIVSNPPYI------ESVIVDCLGLEVRDFDPRISLDGGID 201 + F L+ D++ +NPPYI V ++ + V+ ++P+++L G ++ Sbjct: 198 VGNVFQKHPSSLYKVDLLTANPPYIPREEYNSPVALNGVSKSVKKYEPQLALIGDLE 254 >gi|70732053|ref|YP_261809.1| HemK family modification methylase [Pseudomonas fluorescens Pf-5] gi|68346352|gb|AAY93958.1| modification methylase, HemK family [Pseudomonas fluorescens Pf-5] Length = 326 Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 30/79 (37%), Positives = 44/79 (55%), Gaps = 1/79 (1%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 V R+ D+G GTGA L + + P + + +DI+ +AL NA GV SD Sbjct: 147 VRRVADIGCGTGAGALLVARARPEAQVLALDINPRALRYCAINAELAGVGN-VGVYHSDV 205 Query: 158 FSSVEGLFDVIVSNPPYIE 176 VEG FD+I++NPPY++ Sbjct: 206 LDGVEGNFDLILANPPYMK 224 >gi|16271987|ref|NP_438185.1| 16S ribosomal RNA m2G1207 methyltransferase [Haemophilus influenzae Rd KW20] gi|260580684|ref|ZP_05848511.1| ribosomal RNA small subunit methyltransferase C [Haemophilus influenzae RdAW] gi|1176480|sp|P44453|RSMC_HAEIN RecName: Full=Ribosomal RNA small subunit methyltransferase C; AltName: Full=16S rRNA m2G1207 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rsmC gi|1572956|gb|AAC21690.1| conserved hypothetical protein [Haemophilus influenzae Rd KW20] gi|260092746|gb|EEW76682.1| ribosomal RNA small subunit methyltransferase C [Haemophilus influenzae RdAW] Length = 330 Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 35/118 (29%), Positives = 57/118 (48%), Gaps = 2/118 (1%) Query: 57 WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116 WR + + L + P + +D+ L I+ + ++LDLG G G + + Sbjct: 150 WRTYQHSTLENLTIYSLPGVFSAAELDTGTELLLSTIDNKIKGKVLDLGCGAGVIGSMIK 209 Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174 K +P + DI ALE A+ N + + + SD FS +EG FD+I+SNPP+ Sbjct: 210 KRTPNAQITMTDIHAMALESARKTLSENQL--QGEVYASDVFSDIEGKFDLIISNPPF 265 >gi|308048313|ref|YP_003911879.1| methyltransferase small [Ferrimonas balearica DSM 9799] gi|307630503|gb|ADN74805.1| methyltransferase small [Ferrimonas balearica DSM 9799] Length = 341 Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 31/93 (33%), Positives = 47/93 (50%), Gaps = 2/93 (2%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 +D L + + V R+LD G G G + L + +P + VDI+ AL ++ Sbjct: 184 LDEGTELLLQHLPEHPVGRVLDFGCGDGVIGAFLARRNPAIELEMVDINAMALAASQQTL 243 Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174 NG+ + S+ S VEG FD+IVSNPP+ Sbjct: 244 AQNGLKGK--VYPSNGLSGVEGQFDLIVSNPPF 274 >gi|166366711|ref|YP_001658984.1| phycocyanin operon protein W [Microcystis aeruginosa NIES-843] gi|166089084|dbj|BAG03792.1| phycocyanin operon protein W [Microcystis aeruginosa NIES-843] Length = 396 Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 36/91 (39%), Positives = 50/91 (54%), Gaps = 6/91 (6%) Query: 84 SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143 +A F R +R+ +RILD G GTGA LL +PF V +DIS KALEIAK Sbjct: 41 AAYNFCCHRKPEREDIRILDAGCGTGAGTEYLLALNPFAHVVAIDISEKALEIAKERCNR 100 Query: 144 NGVSER------FDTLQSDWFSSVEGLFDVI 168 +GV+ + F L + +++ G FD+I Sbjct: 101 SGVATKHRGSLDFHHLPLESATNLPGEFDLI 131 >gi|325694368|gb|EGD36280.1| methyltransferase domain protein [Streptococcus sanguinis SK150] Length = 195 Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 31/74 (41%), Positives = 44/74 (59%), Gaps = 3/74 (4%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+LD+G G G + L L K + VDI+ +AL++A+ NA N VS QS+ + Sbjct: 60 RVLDVGCGYGPLGLTLAK-AQGVTATMVDINQRALDLAQKNAERNQVSAHI--FQSNVYE 116 Query: 160 SVEGLFDVIVSNPP 173 V G+FD I+SNPP Sbjct: 117 KVSGIFDHIISNPP 130 >gi|283769319|ref|ZP_06342219.1| methyltransferase small domain protein [Bulleidia extructa W1219] gi|283104095|gb|EFC05478.1| methyltransferase small domain protein [Bulleidia extructa W1219] Length = 197 Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 28/72 (38%), Positives = 45/72 (62%), Gaps = 2/72 (2%) Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 LD+G G GA+ +++L E + VDI+ +AL + +SN V NG+ + + SD F ++ Sbjct: 64 LDMGCGVGAIGISILAEHKKVEMDMVDINNRALRLCRSNVVRNGL--KANVFLSDGFKNI 121 Query: 162 EGLFDVIVSNPP 173 + +D IVSNPP Sbjct: 122 QETYDFIVSNPP 133 >gi|302390844|ref|YP_003826664.1| methyltransferase type 11 [Acetohalobium arabaticum DSM 5501] gi|302202921|gb|ADL11599.1| Methyltransferase type 11 [Acetohalobium arabaticum DSM 5501] Length = 256 Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 36/118 (30%), Positives = 63/118 (53%), Gaps = 12/118 (10%) Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 N+++ SS+ F +D+ L I+ +D R++DLGTGTG + L L ++ Sbjct: 19 NLQIIQSSNHFA------FAIDAVLLADFVEIKPKD--RVIDLGTGTGVIPLLLTGKNDP 70 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPYI 175 + VG++I K E+A+ + + N + + + ++D E FDV+VSNPPY+ Sbjct: 71 DQIVGIEIQVKLAEMAQRSVLYNKLEDVIEIKKADIRQLKEVFAAESFDVVVSNPPYL 128 >gi|324990800|gb|EGC22735.1| methyltransferase domain protein [Streptococcus sanguinis SK353] Length = 195 Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 31/74 (41%), Positives = 44/74 (59%), Gaps = 3/74 (4%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+LD+G G G + L L K + VDI+ +AL++A+ NA N VS QS+ + Sbjct: 60 RVLDVGCGYGPLGLTLAK-AHGVAATMVDINQRALDLAQKNAERNQVSAHI--FQSNVYE 116 Query: 160 SVEGLFDVIVSNPP 173 V G+FD I+SNPP Sbjct: 117 KVSGIFDHIISNPP 130 >gi|125717866|ref|YP_001034999.1| hypothetical protein SSA_1034 [Streptococcus sanguinis SK36] gi|125497783|gb|ABN44449.1| Conserved uncharacterized protein [Streptococcus sanguinis SK36] gi|327489168|gb|EGF20961.1| methyltransferase domain protein [Streptococcus sanguinis SK1058] Length = 195 Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 31/74 (41%), Positives = 44/74 (59%), Gaps = 3/74 (4%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+LD+G G G + L L K + VDI+ +AL++A+ NA N VS QS+ + Sbjct: 60 RVLDVGCGYGPLGLTLAK-AHGVAATMVDINQRALDLAQKNAERNQVSAHI--FQSNVYE 116 Query: 160 SVEGLFDVIVSNPP 173 V G+FD I+SNPP Sbjct: 117 KVSGIFDHIISNPP 130 >gi|145635202|ref|ZP_01790906.1| 16S ribosomal RNA m2G1207 methyltransferase [Haemophilus influenzae PittAA] gi|229845358|ref|ZP_04465489.1| 16S ribosomal RNA m2G1207 methyltransferase [Haemophilus influenzae 6P18H1] gi|145267481|gb|EDK07481.1| 16S ribosomal RNA m2G1207 methyltransferase [Haemophilus influenzae PittAA] gi|229811666|gb|EEP47364.1| 16S ribosomal RNA m2G1207 methyltransferase [Haemophilus influenzae 6P18H1] Length = 330 Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 34/101 (33%), Positives = 53/101 (52%), Gaps = 4/101 (3%) Query: 78 TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137 TEL D+ L I+ + ++LDLG G G + + K +P + DI ALE A Sbjct: 173 TEL--DTGTELLLSTIDNKIKGKVLDLGCGAGVIGSMIKKRAPNAQITMTDIHAMALESA 230 Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESV 178 + N + + + SD FS +EG FD+I+SNPP+ + + Sbjct: 231 RKTLSENQL--QGEVYASDVFSDIEGKFDLIISNPPFHDGI 269 >gi|271499193|ref|YP_003332218.1| rRNA (guanine-N(2)-)-methyltransferase [Dickeya dadantii Ech586] gi|270342748|gb|ACZ75513.1| rRNA (guanine-N(2)-)-methyltransferase [Dickeya dadantii Ech586] Length = 342 Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 28/93 (30%), Positives = 50/93 (53%), Gaps = 2/93 (2%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 +DS L +E ++LDL G G + + + SP + D+S ALE +++ Sbjct: 181 LDSGSQLLLSTLEPHRKGKVLDLACGAGVLAASFARLSPKIRLTLSDVSAAALEASQATL 240 Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174 NG+ + + S+ +S ++G FD+I+SNPP+ Sbjct: 241 AANGLEGQ--VIASNAYSDIQGRFDLIISNPPF 271 >gi|114798814|ref|YP_759410.1| hypothetical protein HNE_0681 [Hyphomonas neptunium ATCC 15444] gi|114738988|gb|ABI77113.1| conserved hypothetical protein [Hyphomonas neptunium ATCC 15444] Length = 247 Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 36/124 (29%), Positives = 59/124 (47%), Gaps = 7/124 (5%) Query: 86 LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145 L+ +LP +EK + +L+LG G G L P G+++S ++++ A NG Sbjct: 36 LSAALPVLEKGE---MLELGCGCGGALLPAAYRMPGVSFTGLEVSRSVSDMSRKGAALNG 92 Query: 146 VSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL-EVRDFDPRISLDGGID 201 R +T S+W S E FD + +NPPY E + G + + +SL+G I Sbjct: 93 FGPRVTIENTEASEWVKSHENRFDAVFANPPYFEPGKISEPGEGKASAYIETLSLEGWIK 152 Query: 202 GLSH 205 + H Sbjct: 153 AMLH 156 >gi|163792422|ref|ZP_02186399.1| Predicted O-methyltransferase [alpha proteobacterium BAL199] gi|159182127|gb|EDP66636.1| Predicted O-methyltransferase [alpha proteobacterium BAL199] Length = 253 Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 40/115 (34%), Positives = 56/115 (48%), Gaps = 16/115 (13%) Query: 72 FEPRPETELLVDSAL-AFSLP-RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129 +PR + VD L A S+P R E+R +LDLG G GAV L LL P V V+ Sbjct: 24 LQPRDGYRVAVDPVLLAASVPVRAEQR----VLDLGCGAGAVFLCLLARFPQLSVVAVER 79 Query: 130 SCKALEIAKSNAVTNGVSER-------FDTLQSDWFSSVEGLFDVIVSNPPYIES 177 +A+ N NGV+ER L + W + FD +V+NPP++ + Sbjct: 80 DPTMAGLARDNVARNGVAERATVVTADLSALPASWEMAA---FDQVVTNPPFLPA 131 >gi|47570394|ref|ZP_00241034.1| 16S rRNA m(2)G 1207 methyltransferase [Bacillus cereus G9241] gi|47552936|gb|EAL11347.1| 16S rRNA m(2)G 1207 methyltransferase [Bacillus cereus G9241] Length = 199 Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 35/87 (40%), Positives = 51/87 (58%), Gaps = 5/87 (5%) Query: 87 AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146 AF +P I K D ILD+G G G + L+L KE K VD++ +ALE+A+ NA N + Sbjct: 52 AFQVPDI-KGD---ILDVGCGYGPIGLSLAKEFQDRKVHMVDVNERALELAEENAANNRI 107 Query: 147 SERFDTLQSDWFSSVEGLFDVIVSNPP 173 QS + +V+G++ I+SNPP Sbjct: 108 G-NVHIFQSSVYENVDGMYAAILSNPP 133 >gi|218530637|ref|YP_002421453.1| methyltransferase small [Methylobacterium chloromethanicum CM4] gi|218522940|gb|ACK83525.1| methyltransferase small [Methylobacterium chloromethanicum CM4] Length = 341 Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 32/76 (42%), Positives = 45/76 (59%), Gaps = 1/76 (1%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R D+G G+GA + + K P + V VDI+ AL A+ NA V + + SD S Sbjct: 161 RAADIGCGSGAAGILVAKRLPEAEVVLVDINPAALRAARINARL-AVVDNVRPVHSDMLS 219 Query: 160 SVEGLFDVIVSNPPYI 175 +VEG FD+IVSNPP++ Sbjct: 220 NVEGSFDLIVSNPPFM 235 >gi|260655696|ref|ZP_05861169.1| putative methyltransferase [Jonquetella anthropi E3_33 E1] gi|260629613|gb|EEX47807.1| putative methyltransferase [Jonquetella anthropi E3_33 E1] Length = 246 Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 37/122 (30%), Positives = 62/122 (50%), Gaps = 11/122 (9%) Query: 59 DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118 D +LT+ PR + +D+ L R+++R+ R L+LG TG V + + Sbjct: 7 DLLGGQLTIRQPVRGPR----VNMDTILLAGFVRLKRRE--RALELGCATGGVAMLMAWR 60 Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD----WFSSVEGLFDVIVSNPPY 174 S G++I + +E+A+ NA +NG+S+R + D W G +DV+ +NPPY Sbjct: 61 SSAHV-TGLEIDQRFVELARQNAESNGLSDRLSFVCGDLTQLWGRGQGGEYDVVAANPPY 119 Query: 175 IE 176 E Sbjct: 120 EE 121 >gi|303240941|ref|ZP_07327452.1| methyltransferase small [Acetivibrio cellulolyticus CD2] gi|302591527|gb|EFL61264.1| methyltransferase small [Acetivibrio cellulolyticus CD2] Length = 197 Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 33/85 (38%), Positives = 49/85 (57%), Gaps = 5/85 (5%) Query: 89 SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148 S+P+I ILD+G G G + ++L + P K +DI+ +A+++ N N + Sbjct: 51 SIPQITGE----ILDIGCGYGVIGISLSRLFPSAKVTMIDINERAVDLTTRNIKLNHANN 106 Query: 149 RFDTLQSDWFSSVEGLFDVIVSNPP 173 LQSD F +V G+FDVIVSNPP Sbjct: 107 A-GALQSDGFINVTGMFDVIVSNPP 130 >gi|270263855|ref|ZP_06192123.1| hypothetical protein SOD_f00690 [Serratia odorifera 4Rx13] gi|270042048|gb|EFA15144.1| hypothetical protein SOD_f00690 [Serratia odorifera 4Rx13] Length = 347 Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 30/93 (32%), Positives = 51/93 (54%), Gaps = 2/93 (2%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 +D + L +EK ++LDLG G G + L K SP K D++ A+E +++ Sbjct: 181 LDVGSSLLLSTLEKHMKGKVLDLGCGAGVMASVLSKLSPKVKLTLSDVNAAAVESSRATL 240 Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174 NG+ + + S+ +S + G FD+I+SNPP+ Sbjct: 241 AANGIEG--EVIVSNVYSDITGRFDMIISNPPF 271 >gi|170740785|ref|YP_001769440.1| methyltransferase small [Methylobacterium sp. 4-46] gi|168195059|gb|ACA17006.1| methyltransferase small [Methylobacterium sp. 4-46] Length = 315 Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 40/95 (42%), Positives = 55/95 (57%), Gaps = 5/95 (5%) Query: 95 KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154 +R V R +D+G G+GA + + K +P + V VDI+ KAL A+ NA GV+ Sbjct: 133 ERPVRRAVDIGCGSGAAGILIAKRAPGAEVVLVDINEKALRAARLNARAAGVAN-VRARP 191 Query: 155 SDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRD 189 S+ S VEG FD+IVSNPP+ +VD G RD Sbjct: 192 SNMLSGVEGAFDLIVSNPPF----MVDAAGRAYRD 222 >gi|332360339|gb|EGJ38151.1| methyltransferase domain protein [Streptococcus sanguinis SK49] Length = 195 Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 30/74 (40%), Positives = 45/74 (60%), Gaps = 3/74 (4%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+LD+G G G + L L K + VDI+ +AL++A+ NA N +S + QS+ + Sbjct: 60 RVLDVGCGYGPLGLTLAK-AQGVTATMVDINQRALDLAQKNAERNQISA--EIFQSNVYE 116 Query: 160 SVEGLFDVIVSNPP 173 V G+FD I+SNPP Sbjct: 117 KVNGIFDHIISNPP 130 >gi|258540448|ref|YP_003174947.1| 16S rRNA m(2)G 1207 methyltransferase [Lactobacillus rhamnosus Lc 705] gi|257152124|emb|CAR91096.1| 16S rRNA m(2)G 1207 methyltransferase [Lactobacillus rhamnosus Lc 705] Length = 198 Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 32/96 (33%), Positives = 53/96 (55%), Gaps = 7/96 (7%) Query: 78 TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137 + +L+ + LA +LP ILD+G G G + L L K P + D++ +AL +A Sbjct: 45 SRVLIAAVLAETLPDGP------ILDVGAGYGPIGLPLAKHFPNRQVTMSDVNERALALA 98 Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173 K NA NG++ ++S + S++ F V+V+NPP Sbjct: 99 KQNAADNGITN-VSIIESSMYDSIDDQFAVVVTNPP 133 >gi|259480051|tpe|CBF70831.1| TPA: hypothetical protein ANIA_10829 [Aspergillus nidulans FGSC A4] Length = 359 Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 63/204 (30%), Positives = 87/204 (42%), Gaps = 41/204 (20%) Query: 33 RQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPR 92 R+R + + RS + + ILG + F + + + PR ETE + R Sbjct: 65 RRRLLKSMCLARS-RGVPLQYILGDQPFGELDIKCTKGVLIPRHETEAITIHTAKLIQDR 123 Query: 93 IE--KRD---VVRILDLGTGTGAVCLALLKES----PFFKGVGVDISCKALEIAKSNAVT 143 + +RD +RILDL TGTG + L L P VGVD+S A+ +AK N Sbjct: 124 MTCVERDGAAPLRILDLCTGTGCISLLLHSLLSPCFPRLSIVGVDVSAIAIRLAKENVER 183 Query: 144 NG----VSERFDT-----------LQSDWFSSVEGLF--------------DVIVSNPPY 174 N +SER L S S +EGLF DVI+SNPPY Sbjct: 184 NVRLGLLSERALNEVDFQHGDVLGLSSGPLSQLEGLFDRTTGLSASSGPRCDVIISNPPY 243 Query: 175 --IESVIVDCLGLEVRDFDPRISL 196 +E VR F+PR++L Sbjct: 244 VSVEEYHDGTTSRSVRLFEPRLAL 267 >gi|284041969|ref|YP_003392309.1| methyltransferase small [Conexibacter woesei DSM 14684] gi|283946190|gb|ADB48934.1| methyltransferase small [Conexibacter woesei DSM 14684] Length = 363 Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 54/154 (35%), Positives = 74/154 (48%), Gaps = 20/154 (12%) Query: 72 FEPRPETELLVD-SALAFSLPRI--EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128 +EP ELLVD SA AF + R + R L+LGTG+G + ++LL + + V V+ Sbjct: 124 YEP---GELLVDISATAFWMARFVANRGPARRALELGTGSG-LLVSLLDAA---EAVAVE 176 Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEV 187 E+A N + NG+ ER + F V + FD+IV+NPP CL Sbjct: 177 GEPGTAEVATFNVLLNGLDERVEVRAGKLFEPVADEQFDLIVANPP--------CLPAPH 228 Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221 P S DGG DG + R + GV HL G Sbjct: 229 GVALPPPS-DGGEDGDAVLRQVLAGVGEHLEFGG 261 >gi|261339036|ref|ZP_05966894.1| hypothetical protein ENTCAN_05245 [Enterobacter cancerogenus ATCC 35316] gi|288318871|gb|EFC57809.1| ribosomal RNA small subunit methyltransferase C [Enterobacter cancerogenus ATCC 35316] Length = 342 Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 35/122 (28%), Positives = 53/122 (43%), Gaps = 23/122 (18%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LD+G G G + L SP + D+S A+E +++ NG + + S+ FS Sbjct: 199 KVLDVGCGAGVLATVLASHSPKVRLTLCDVSAPAVEASRATLAANGFEG--EVIASNVFS 256 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 V G FD+I+SNPP+ DG L + + G RHLN Sbjct: 257 DVTGRFDMIISNPPF---------------------HDGMETSLEAAQALIRGAVRHLNS 295 Query: 220 DG 221 G Sbjct: 296 GG 297 >gi|297527378|ref|YP_003669402.1| methyltransferase small [Staphylothermus hellenicus DSM 12710] gi|297256294|gb|ADI32503.1| methyltransferase small [Staphylothermus hellenicus DSM 12710] Length = 193 Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 38/116 (32%), Positives = 56/116 (48%), Gaps = 5/116 (4%) Query: 63 VRLTLSSDTFEPRPETELL----VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118 + LT+ T E T L VD L ++ D +LD+G G G + L + K Sbjct: 16 IPLTIRGVTLEFVSYTSLFSGKEVDKGTYLLLKYMDIPDNGEVLDVGCGYGVIGLTIAKL 75 Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPP 173 +P K VDI+ A++I K NA N + ++ LQ D + + L F+ I SNPP Sbjct: 76 NPRLKVYMVDINPLAVKITKYNAKLNNLEKQVSVLQGDAYEPFKNLRFNAIYSNPP 131 >gi|326693433|ref|ZP_08230438.1| ribosomal RNA small subunit methyltransferase C [Leuconostoc argentinum KCTC 3773] Length = 213 Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 28/75 (37%), Positives = 47/75 (62%), Gaps = 3/75 (4%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVG-VDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 ++LDLGTG G V +A+ K+ + + V VD++ +AL +A+ NA NGV + QSD + Sbjct: 70 KVLDLGTGYGPVGVAIAKK--YQRPVDMVDVNERALALAQQNAKQNGVDQLVSVFQSDIY 127 Query: 159 SSVEGLFDVIVSNPP 173 + + +I++NPP Sbjct: 128 QQITDQYALILTNPP 142 >gi|324993041|gb|EGC24961.1| methyltransferase domain protein [Streptococcus sanguinis SK405] gi|324995650|gb|EGC27562.1| methyltransferase domain protein [Streptococcus sanguinis SK678] gi|327461309|gb|EGF07640.1| methyltransferase domain protein [Streptococcus sanguinis SK1] gi|327473947|gb|EGF19360.1| methyltransferase domain protein [Streptococcus sanguinis SK408] Length = 195 Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 30/74 (40%), Positives = 45/74 (60%), Gaps = 3/74 (4%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LD+G G G + L L K + VDI+ +AL++A+ NA N +S D QS+ + Sbjct: 60 QVLDVGCGYGPLGLTLAK-AQGVTATMVDINQRALDLAQKNAERNQISA--DIFQSNVYE 116 Query: 160 SVEGLFDVIVSNPP 173 V G+FD I+SNPP Sbjct: 117 KVSGIFDHIISNPP 130 >gi|325696648|gb|EGD38537.1| methyltransferase domain protein [Streptococcus sanguinis SK160] Length = 195 Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 30/74 (40%), Positives = 45/74 (60%), Gaps = 3/74 (4%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LD+G G G + L L K + VDI+ +AL++A+ NA N +S D QS+ + Sbjct: 60 QVLDVGCGYGPLGLTLAK-AQGVTATMVDINQRALDLAQKNAERNQISA--DIFQSNVYE 116 Query: 160 SVEGLFDVIVSNPP 173 V G+FD I+SNPP Sbjct: 117 KVSGIFDHIISNPP 130 >gi|306833532|ref|ZP_07466659.1| methyltransferase domain protein [Streptococcus bovis ATCC 700338] gi|304424302|gb|EFM27441.1| methyltransferase domain protein [Streptococcus bovis ATCC 700338] Length = 197 Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 29/73 (39%), Positives = 45/73 (61%), Gaps = 3/73 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LDLG G G + ++L K + VDI+ +A+++A+ NA NGV+ + QS+ + Sbjct: 61 LLDLGCGYGPLGISLAKVQGV-QATMVDINNRAIDLAQKNAEKNGVTA--NIFQSNIYEK 117 Query: 161 VEGLFDVIVSNPP 173 V G FD I+SNPP Sbjct: 118 VSGTFDYIISNPP 130 >gi|167855880|ref|ZP_02478630.1| 16S ribosomal RNA m2G1207 methyltransferase [Haemophilus parasuis 29755] gi|167852968|gb|EDS24232.1| 16S ribosomal RNA m2G1207 methyltransferase [Haemophilus parasuis 29755] Length = 313 Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 31/79 (39%), Positives = 43/79 (54%), Gaps = 2/79 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LDLG G G + L ++ P K DI ALE +K N + D + SD FS Sbjct: 192 KVLDLGCGAGVIGACLKQQFPKIKLTMSDIHAMALESSKRTLAENQLEG--DVVASDVFS 249 Query: 160 SVEGLFDVIVSNPPYIESV 178 + G FD+IVSNPP+ + V Sbjct: 250 HIGGRFDLIVSNPPFHDGV 268 >gi|219872063|ref|YP_002476438.1| 16S ribosomal RNA m2G1207 methyltransferase [Haemophilus parasuis SH0165] gi|219692267|gb|ACL33490.1| 16S ribosomal RNA m2G1207 methyltransferase [Haemophilus parasuis SH0165] Length = 313 Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 31/79 (39%), Positives = 43/79 (54%), Gaps = 2/79 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LDLG G G + L ++ P K DI ALE +K N + D + SD FS Sbjct: 192 KVLDLGCGAGVIGACLKQQFPKIKLTMSDIHAMALESSKRTLAENQLEG--DVVASDVFS 249 Query: 160 SVEGLFDVIVSNPPYIESV 178 + G FD+IVSNPP+ + V Sbjct: 250 HIGGRFDLIVSNPPFHDGV 268 >gi|325689831|gb|EGD31835.1| methyltransferase domain protein [Streptococcus sanguinis SK115] Length = 195 Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 31/74 (41%), Positives = 44/74 (59%), Gaps = 3/74 (4%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+LD+G G G + L L K + VDI+ +AL++A+ NA N VS QS+ + Sbjct: 60 RVLDVGCGYGPLGLTLAK-AYGVAATMVDINQRALDLAQKNAERNQVSAHI--FQSNVYE 116 Query: 160 SVEGLFDVIVSNPP 173 V G+FD I+SNPP Sbjct: 117 KVNGIFDHIISNPP 130 >gi|325297717|ref|YP_004257634.1| tRNA (adenine-N(6)-)-methyltransferase [Bacteroides salanitronis DSM 18170] gi|324317270|gb|ADY35161.1| tRNA (adenine-N(6)-)-methyltransferase [Bacteroides salanitronis DSM 18170] Length = 252 Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 43/158 (27%), Positives = 71/158 (44%), Gaps = 22/158 (13%) Query: 96 RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155 R +LD+GTG+G + L + + + G+DI A+ A NA+ + S R Q+ Sbjct: 53 RQARNVLDIGTGSGLIALMIAQRCQA-QVTGIDIDSDAIGQAGENALASPWSGRIRFCQA 111 Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL-DGGIDGLSH-----YRTI 209 D + G++D IVSNPPY F R+ DG + H + + Sbjct: 112 DAGAFQGGVYDTIVSNPPY---------------FRERVHCPDGQRNAARHTESLTFECL 156 Query: 210 ADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLV 247 D V+R +++DG SV + + + R L+L+ Sbjct: 157 LDAVARLMSEDGSFSVILPAEAGERFITLAAERHLYLL 194 >gi|322373099|ref|ZP_08047635.1| methyltransferase domain protein [Streptococcus sp. C150] gi|321278141|gb|EFX55210.1| methyltransferase domain protein [Streptococcus sp. C150] Length = 196 Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 37/123 (30%), Positives = 65/123 (52%), Gaps = 13/123 (10%) Query: 58 RDFYNVRLTLSSDTFEPRPETELLVDSALAFS----LPRIEKRDVVRILDLGTGTGAVCL 113 D +++++ L ++F+ + + + F L ++ D +LD+G G G + + Sbjct: 14 HDIHDLKVNLLGESFQFYTDAGVFSKKMIDFGSQVLLNSLDLEDGKTLLDVGCGYGPLGI 73 Query: 114 ALLKESPFFKGVGV---DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170 +L K +GV V DI+ +A+++AK NA N V D QS+ + +V G FD I+S Sbjct: 74 SLAK----VQGVKVTMIDINSRAIDLAKQNAERNKVD--VDIFQSNIYENVTGNFDYIIS 127 Query: 171 NPP 173 NPP Sbjct: 128 NPP 130 >gi|320533183|ref|ZP_08033904.1| methyltransferase small domain protein [Actinomyces sp. oral taxon 171 str. F0337] gi|320134615|gb|EFW26842.1| methyltransferase small domain protein [Actinomyces sp. oral taxon 171 str. F0337] Length = 178 Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 39/112 (34%), Positives = 57/112 (50%), Gaps = 9/112 (8%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 VV DL TG+GA+ + KE P + V V+IS A +A+ N V R + + +D Sbjct: 9 VVLTADLCTGSGAIAACVAKEVPGARVVAVEISETAASLARENC-ERLVPGRVEVIHADA 67 Query: 158 -----FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL-DGGIDGL 203 + G DV+VSNPPY+ + V+ E +P ++L GG DGL Sbjct: 68 TDPLVLHDLNGQVDVVVSNPPYVPAGAVE--DTETAQHEPTVALYGGGPDGL 117 >gi|296242613|ref|YP_003650100.1| 16S rRNA m(2)G 1207 methyltransferase [Thermosphaera aggregans DSM 11486] gi|296095197|gb|ADG91148.1| 16S rRNA m(2)G 1207 methyltransferase [Thermosphaera aggregans DSM 11486] Length = 192 Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 41/133 (30%), Positives = 64/133 (48%), Gaps = 6/133 (4%) Query: 63 VRLTLSSDTFEPRPETELL----VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118 + T+ TFE T L VD L ++ +LD+G G G + + L K Sbjct: 15 IPFTIHGHTFEFLSYTSLFSGKQVDEGTRLLLENVKTPVEGEVLDVGCGYGVIGIVLAKL 74 Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIES 177 +P + D++ A++ A+ NA NGV +R LQ D + V+ +F+ I SNPP Sbjct: 75 NPRLRVYMTDVNPLAVKTAQHNAELNGVGDRVVILQGDRYEPVKDKVFNAIYSNPPLSAG 134 Query: 178 V-IVDCLGLEVRD 189 + IV+ + L RD Sbjct: 135 MRIVEEIVLGARD 147 >gi|228919051|ref|ZP_04082430.1| hypothetical protein bthur0011_870 [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|229041006|ref|ZP_04189769.1| hypothetical protein bcere0027_870 [Bacillus cereus AH676] gi|228727303|gb|EEL78497.1| hypothetical protein bcere0027_870 [Bacillus cereus AH676] gi|228840576|gb|EEM85838.1| hypothetical protein bthur0011_870 [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 213 Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 35/96 (36%), Positives = 54/96 (56%), Gaps = 8/96 (8%) Query: 78 TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137 + LL++ AF +P I+ ILD+G G G + L+L KE + VD++ +AL +A Sbjct: 60 SRLLIE---AFQMPDIKGN----ILDVGCGYGPIGLSLAKEFQGREVHMVDVNERALGLA 112 Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173 K NA N + E QS + +V+G + I+SNPP Sbjct: 113 KENAANNKI-ENIRIFQSSVYENVDGKYAAILSNPP 147 >gi|218231310|ref|YP_002364950.1| ybxB protein [Bacillus cereus B4264] gi|218159267|gb|ACK59259.1| ybxB protein [Bacillus cereus B4264] Length = 199 Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 35/96 (36%), Positives = 54/96 (56%), Gaps = 8/96 (8%) Query: 78 TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137 + LL++ AF +P I+ ILD+G G G + L+L KE + VD++ +AL +A Sbjct: 46 SRLLIE---AFQMPDIKGN----ILDVGCGYGPIGLSLAKEFQGREVHMVDVNERALGLA 98 Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173 K NA N + E QS + +V+G + I+SNPP Sbjct: 99 KENAANNKI-ENIRIFQSSVYENVDGKYAAILSNPP 133 >gi|229083421|ref|ZP_04215769.1| hypothetical protein bcere0022_1010 [Bacillus cereus Rock3-44] gi|228699854|gb|EEL52491.1| hypothetical protein bcere0022_1010 [Bacillus cereus Rock3-44] Length = 213 Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 35/87 (40%), Positives = 50/87 (57%), Gaps = 5/87 (5%) Query: 87 AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146 AF +P I K DV LD+G G G + L+L KE VD++ +ALE+AK NA N + Sbjct: 66 AFQMPDI-KGDV---LDVGCGYGPIGLSLAKEFQERSVHMVDVNERALELAKENAANNKI 121 Query: 147 SERFDTLQSDWFSSVEGLFDVIVSNPP 173 + QS + +V+G + I+SNPP Sbjct: 122 -DNVRIFQSSVYENVDGKYAAILSNPP 147 >gi|229148510|ref|ZP_04276766.1| hypothetical protein bcere0011_880 [Bacillus cereus m1550] gi|228634926|gb|EEK91499.1| hypothetical protein bcere0011_880 [Bacillus cereus m1550] Length = 213 Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 35/96 (36%), Positives = 54/96 (56%), Gaps = 8/96 (8%) Query: 78 TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137 + LL++ AF +P I+ ILD+G G G + L+L KE + VD++ +AL +A Sbjct: 60 SRLLIE---AFQMPDIKGN----ILDVGCGYGPIGLSLAKEFQGREVHMVDVNERALGLA 112 Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173 K NA N + E QS + +V+G + I+SNPP Sbjct: 113 KENAANNKI-ENIRIFQSSVYENVDGKYAAILSNPP 147 >gi|229142907|ref|ZP_04271348.1| hypothetical protein bcere0012_880 [Bacillus cereus BDRD-ST24] gi|296500935|ref|YP_003662635.1| 16S rRNA m(2)G 1207 methyltransferase [Bacillus thuringiensis BMB171] gi|228640528|gb|EEK96917.1| hypothetical protein bcere0012_880 [Bacillus cereus BDRD-ST24] gi|296321987|gb|ADH04915.1| 16S rRNA m(2)G 1207 methyltransferase [Bacillus thuringiensis BMB171] Length = 199 Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 37/99 (37%), Positives = 56/99 (56%), Gaps = 14/99 (14%) Query: 78 TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV---DISCKAL 134 + LL++ AF +P I+ ILD+G G G + L+L KE F+G V D++ +AL Sbjct: 46 SRLLIE---AFQMPDIKGN----ILDVGCGYGPIGLSLAKE---FQGREVHMVDVNERAL 95 Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173 +AK NA N + E QS + +V+G + I+SNPP Sbjct: 96 GLAKENAANNKI-ENIRIFQSSVYENVDGKYAAILSNPP 133 >gi|254820813|ref|ZP_05225814.1| methylase, putative [Mycobacterium intracellulare ATCC 13950] Length = 229 Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 43/136 (31%), Positives = 65/136 (47%), Gaps = 9/136 (6%) Query: 68 SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 + + + P+ ++ LLVD L I R R+LDL TG+G V +A E Sbjct: 13 TQNVYRPQEDSRLLVDVMHETGL--IPGR---RVLDLCTGSGFVAIAA-AEMGCADTTAF 66 Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLE 186 DI +A+ A+ NA G+ D + W ++VE FDV+VSNPPY+ + L Sbjct: 67 DICPQAVRCARENAAAAGID--IDVREGSWITAVECAPFDVVVSNPPYVPTPPGAELEEI 124 Query: 187 VRDFDPRISLDGGIDG 202 + P + + G DG Sbjct: 125 CPEAGPSWAWNAGRDG 140 >gi|228956542|ref|ZP_04118338.1| hypothetical protein bthur0005_880 [Bacillus thuringiensis serovar pakistani str. T13001] gi|228803107|gb|EEM49929.1| hypothetical protein bthur0005_880 [Bacillus thuringiensis serovar pakistani str. T13001] Length = 213 Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 35/96 (36%), Positives = 54/96 (56%), Gaps = 8/96 (8%) Query: 78 TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137 + LL++ AF +P I+ ILD+G G G + L+L KE + VD++ +AL +A Sbjct: 60 SRLLIE---AFQMPDIKGN----ILDVGCGYGPIGLSLAKEFQGREVHMVDVNERALGLA 112 Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173 K NA N + E QS + +V+G + I+SNPP Sbjct: 113 KENAANNKI-ENIRIFQSSVYENVDGKYAAILSNPP 147 >gi|228963201|ref|ZP_04124370.1| hypothetical protein bthur0004_920 [Bacillus thuringiensis serovar sotto str. T04001] gi|228796459|gb|EEM43898.1| hypothetical protein bthur0004_920 [Bacillus thuringiensis serovar sotto str. T04001] Length = 199 Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 37/99 (37%), Positives = 56/99 (56%), Gaps = 14/99 (14%) Query: 78 TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV---DISCKAL 134 + LL++ AF +P I+ ILD+G G G + L+L KE F+G V D++ +AL Sbjct: 46 SRLLIE---AFQMPDIKGN----ILDVGCGYGPIGLSLAKE---FQGREVHMVDVNERAL 95 Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173 +AK NA N + E QS + +V+G + I+SNPP Sbjct: 96 GLAKENAANNKI-ENIRIFQSSVYENVDGKYAAILSNPP 133 >gi|146280537|ref|YP_001170690.1| HemK family modification methylase [Pseudomonas stutzeri A1501] gi|145568742|gb|ABP77848.1| modification methylase, HemK family [Pseudomonas stutzeri A1501] Length = 315 Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 28/78 (35%), Positives = 46/78 (58%), Gaps = 1/78 (1%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 + R +D+G G+GA + P + + VDI+ +AL + NA G ++ L SD Sbjct: 135 IRRAVDIGCGSGAGAILTALARPQAEVLAVDINPEALRLTHINAALAG-ADNLRALHSDL 193 Query: 158 FSSVEGLFDVIVSNPPYI 175 S+V+G FD+I++NPPY+ Sbjct: 194 LSAVDGEFDLILANPPYL 211 >gi|329898826|ref|ZP_08272488.1| Hypothetical adenine-specific methylase yfcB [gamma proteobacterium IMCC3088] gi|328920726|gb|EGG28195.1| Hypothetical adenine-specific methylase yfcB [gamma proteobacterium IMCC3088] Length = 300 Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 38/130 (29%), Positives = 65/130 (50%), Gaps = 2/130 (1%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 +LDL G G++ + + V DI AL +A+ N V + + +QSD + Sbjct: 129 EVLDLCCGGGSLGILAALNHAETQVVLADIDPDALALAQLNVVKHQLESHVQCVQSDVLA 188 Query: 160 SVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 SV FD+++ NPPY++S + L E +P I+L G DGL R + + + L+ Sbjct: 189 SVPPRYFDIVLCNPPYVDSEDMSNLPAEYL-HEPHIALASGRDGLDFTRQLLAQLPKFLH 247 Query: 219 KDGLCSVEIG 228 + + +E+G Sbjct: 248 SNSVVFLELG 257 >gi|218895236|ref|YP_002443647.1| ybxB protein [Bacillus cereus G9842] gi|218542476|gb|ACK94870.1| ybxB protein [Bacillus cereus G9842] Length = 199 Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 37/99 (37%), Positives = 56/99 (56%), Gaps = 14/99 (14%) Query: 78 TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV---DISCKAL 134 + LL++ AF +P I+ ILD+G G G + L+L KE F+G V D++ +AL Sbjct: 46 SRLLIE---AFQMPDIKGN----ILDVGCGYGPIGLSLAKE---FQGREVHMVDVNERAL 95 Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173 +AK NA N + E QS + +V+G + I+SNPP Sbjct: 96 GLAKENAANNKI-ENIRIFQSSVYENVDGKYAAILSNPP 133 >gi|239618399|ref|YP_002941721.1| Methyltransferase type 11 [Kosmotoga olearia TBF 19.5.1] gi|239507230|gb|ACR80717.1| Methyltransferase type 11 [Kosmotoga olearia TBF 19.5.1] Length = 235 Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 35/113 (30%), Positives = 63/113 (55%), Gaps = 10/113 (8%) Query: 90 LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 LP+ KR +L+LGTG+GA+ + L ++ + +D+ + +EIA NA N V+++ Sbjct: 46 LPKATKR----VLELGTGSGAISIYLARKYD-VEITAIDVDEELIEIAHKNARVNNVTDK 100 Query: 150 FDTLQSDWFSSVE----GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG 198 +Q +VE G FDV+VSNPP+ ++ + R+ R++++G Sbjct: 101 VKFMQLSSAMAVEKFSAGSFDVVVSNPPHFAHEGIESPS-QRRNSSRRLTIEG 152 >gi|228905898|ref|ZP_04069795.1| hypothetical protein bthur0013_890 [Bacillus thuringiensis IBL 200] gi|228853713|gb|EEM98473.1| hypothetical protein bthur0013_890 [Bacillus thuringiensis IBL 200] Length = 213 Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 37/99 (37%), Positives = 56/99 (56%), Gaps = 14/99 (14%) Query: 78 TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV---DISCKAL 134 + LL++ AF +P I+ ILD+G G G + L+L KE F+G V D++ +AL Sbjct: 60 SRLLIE---AFQMPDIKGN----ILDVGCGYGPIGLSLAKE---FQGREVHMVDVNERAL 109 Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173 +AK NA N + E QS + +V+G + I+SNPP Sbjct: 110 GLAKENAANNKI-ENIRIFQSSVYENVDGKYAAILSNPP 147 >gi|229107787|ref|ZP_04237423.1| hypothetical protein bcere0018_880 [Bacillus cereus Rock1-15] gi|228675636|gb|EEL30844.1| hypothetical protein bcere0018_880 [Bacillus cereus Rock1-15] Length = 199 Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 35/96 (36%), Positives = 54/96 (56%), Gaps = 8/96 (8%) Query: 78 TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137 + LL++ AF +P I+ ILD+G G G + L+L KE + VD++ +AL +A Sbjct: 46 SRLLIE---AFQMPDIKGN----ILDVGCGYGPIGLSLAKEFQGREVHMVDVNERALGLA 98 Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173 K NA N + E QS + +V+G + I+SNPP Sbjct: 99 KENAANNKI-ENIRIFQSSVYENVDGKYAAILSNPP 133 >gi|320546792|ref|ZP_08041101.1| methyltransferase domain protein [Streptococcus equinus ATCC 9812] gi|320448564|gb|EFW89298.1| methyltransferase domain protein [Streptococcus equinus ATCC 9812] Length = 196 Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 38/120 (31%), Positives = 62/120 (51%), Gaps = 7/120 (5%) Query: 58 RDFYNVRLTLSSDTFEPRPETEL----LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113 D + +++TL +F ++ + +VD L +E +LDLG G G + + Sbjct: 14 HDIHELKVTLLGQSFTFLTDSGVFSKKMVDYGSQVLLNSLEFNQGETLLDLGCGYGPLGI 73 Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173 +L K K VDI+ +A+++AK NA NGV D QS+ + V G F+ ++SNPP Sbjct: 74 SLAKVQGI-KPTMVDINNRAIDLAKQNANKNGVGA--DIYQSNIYEKVIGTFNHVISNPP 130 >gi|288803322|ref|ZP_06408755.1| methyltransferase [Prevotella melaninogenica D18] gi|288334142|gb|EFC72584.1| methyltransferase [Prevotella melaninogenica D18] Length = 236 Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 47/154 (30%), Positives = 70/154 (45%), Gaps = 20/154 (12%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS--- 155 RILD+GTGTG + L + + + ++I ALE A N + ++R + L S Sbjct: 34 TRILDIGTGTGLIALMMAQRFSIAQIDAIEIDKGALEDAHLNVSASPFNDRINILNSSLQ 93 Query: 156 DWF----SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIAD 211 D+ + EG++D IV NPPY + + + L + + D LSH I Sbjct: 94 DYIPCSETQEEGIYDAIVCNPPYFINSLKNPL--------QQRTTARHTDTLSHQELIYH 145 Query: 212 GVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245 R L +G SV I YN K I E+ +F Sbjct: 146 S-KRLLKANGTLSVIIPYNNK----DILEAEAIF 174 >gi|327478774|gb|AEA82084.1| HemK family modification methylase [Pseudomonas stutzeri DSM 4166] Length = 315 Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 28/78 (35%), Positives = 46/78 (58%), Gaps = 1/78 (1%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 + R +D+G G+GA + P + + VDI+ +AL + NA G ++ L SD Sbjct: 135 IRRAVDIGCGSGAGAILTALARPQAEVLAVDINPEALRLTHINAALAG-ADNLRALHSDL 193 Query: 158 FSSVEGLFDVIVSNPPYI 175 S+V+G FD+I++NPPY+ Sbjct: 194 LSAVDGEFDLILANPPYL 211 >gi|323351703|ref|ZP_08087357.1| methyltransferase domain protein [Streptococcus sanguinis VMC66] gi|322122189|gb|EFX93915.1| methyltransferase domain protein [Streptococcus sanguinis VMC66] Length = 195 Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 31/74 (41%), Positives = 44/74 (59%), Gaps = 3/74 (4%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+LD+G G G + L L K + VDI+ +AL++A+ NA N VS QS+ + Sbjct: 60 RVLDVGCGYGPLGLTLAK-AYGVAATMVDINQRALDLAQKNAERNQVSAHI--FQSNVYE 116 Query: 160 SVEGLFDVIVSNPP 173 V G+FD I+SNPP Sbjct: 117 KVSGIFDHIISNPP 130 >gi|170695785|ref|ZP_02886927.1| methyltransferase small [Burkholderia graminis C4D1M] gi|170139390|gb|EDT07576.1| methyltransferase small [Burkholderia graminis C4D1M] Length = 375 Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 37/107 (34%), Positives = 55/107 (51%), Gaps = 4/107 (3%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 + D+GTGTG V ALL + K V D +AL A+ N G ++ D +Q+D F Sbjct: 198 KAFDVGTGTG-VLAALLAKRGVKKIVATDQDPRALACARENLARLGYEQQVDVVQADLFP 256 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206 EG ++V NPP++ + + V D D R+ L G + GLS + Sbjct: 257 --EGRAPLVVCNPPWVPARPASPIEYAVYDPDSRMLL-GFLKGLSEH 300 >gi|291458687|ref|ZP_06598077.1| putative N-6 adenine-specific DNA methylase [Oribacterium sp. oral taxon 078 str. F0262] gi|291418604|gb|EFE92323.1| putative N-6 adenine-specific DNA methylase [Oribacterium sp. oral taxon 078 str. F0262] Length = 243 Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 31/96 (32%), Positives = 54/96 (56%), Gaps = 6/96 (6%) Query: 88 FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147 ++LP + R+ ++LDLGTGTG + L L ++ + G++I A ++A+ +A NG Sbjct: 34 YALPAV--REGSQLLDLGTGTGVIPLLLSAKTKARRLYGLEIQKSAADLAERSAALNGQE 91 Query: 148 ERFDTLQSDWFS----SVEGLFDVIVSNPPYIESVI 179 R L+ D + D+++SNPPY++S I Sbjct: 92 GRIQILRGDIRRIRDFPLSSRMDLVLSNPPYLKSGI 127 >gi|288922983|ref|ZP_06417140.1| modification methylase, HemK family [Frankia sp. EUN1f] gi|288345659|gb|EFC80031.1| modification methylase, HemK family [Frankia sp. EUN1f] Length = 362 Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 50/179 (27%), Positives = 74/179 (41%), Gaps = 27/179 (15%) Query: 50 SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109 + + G F + + + F PRPETE +V+ AL R V +DL +G+G Sbjct: 95 PLQHLTGVAGFRRLDIAVGPGVFIPRPETEWVVEGALEALRSLAVARPV--CVDLCSGSG 152 Query: 110 AVCLALLKESPFFKGVGVDISCKALEI------------------------AKSNAVTNG 145 A+ LAL E P + V++ AL A ++A T G Sbjct: 153 AIALALADELPAAQVHAVEVEPSALGWLRRNVERTGLPVHVHHADVGISADADADAYTGG 212 Query: 146 VSERFDTLQSD-WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203 + R + + G D++VSNPPY+ + EV DP +L GG DGL Sbjct: 213 GAGRPSAPPVRVALADLAGRVDLVVSNPPYLPDRDRALVEPEVGRHDPPAALWGGPDGL 271 >gi|315634703|ref|ZP_07889987.1| ribosomal RNA small subunit methyltransferase C [Aggregatibacter segnis ATCC 33393] gi|315476651|gb|EFU67399.1| ribosomal RNA small subunit methyltransferase C [Aggregatibacter segnis ATCC 33393] Length = 334 Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 31/78 (39%), Positives = 43/78 (55%), Gaps = 2/78 (2%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LD+G G G + + K P K V DI ALE A+ N + + L SD FS Sbjct: 198 VLDIGCGAGVIGSYIQKHHPKTKLVMTDIHAMALESAQRTLRENQL--QGTVLASDVFSH 255 Query: 161 VEGLFDVIVSNPPYIESV 178 VEG FD+I+SNPP+ + + Sbjct: 256 VEGKFDLIISNPPFHDGI 273 >gi|291037415|ref|ZP_06568379.1| HemK family modification methylase [Gluconacetobacter xylinus NBRC 3288] Length = 302 Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 31/78 (39%), Positives = 45/78 (57%), Gaps = 1/78 (1%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 VR +D+G GTG + + + P + V VDI+ AL +A+ NA GV + Q D Sbjct: 125 VRAVDIGCGTGLGAIMVAQACPGTEVVMVDINPGALRLARINARIAGV-DGIRAWQGDLL 183 Query: 159 SSVEGLFDVIVSNPPYIE 176 S + G FD+I+SNPPY+ Sbjct: 184 SGLAGEFDLILSNPPYLP 201 >gi|13541022|ref|NP_110710.1| RNA methylase [Thermoplasma volcanium GSS1] gi|14324405|dbj|BAB59333.1| hypothetical protein [Thermoplasma volcanium GSS1] Length = 183 Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 35/123 (28%), Positives = 58/123 (47%), Gaps = 24/123 (19%) Query: 58 RDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117 ++++ +R+ +EP +T LL+ A R +++G GTG V Sbjct: 2 KEYFGIRIEECESVYEPSDDTFLLMQYAECKG----------RAIEIGCGTGLV------ 45 Query: 118 ESPFFKGVGVDISC-----KALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNP 172 S +FK G +I C A++ K NA NGVS + SD F + G++D ++ N Sbjct: 46 -SIYFKKRGCNIECVDLNQSAVDCTKRNAEINGVS--LNVYASDLFEAARGVYDTVLFNA 102 Query: 173 PYI 175 PY+ Sbjct: 103 PYL 105 >gi|91794327|ref|YP_563978.1| rRNA (guanine-N(2)-)-methyltransferase [Shewanella denitrificans OS217] gi|123060654|sp|Q12JX1|RSMC_SHEDO RecName: Full=Ribosomal RNA small subunit methyltransferase C; AltName: Full=16S rRNA m2G1207 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rsmC gi|91716329|gb|ABE56255.1| 16S rRNA m(2)G 1207 methyltransferase [Shewanella denitrificans OS217] Length = 345 Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 34/97 (35%), Positives = 49/97 (50%), Gaps = 11/97 (11%) Query: 78 TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137 TELL+ LP++E R +LD G G G + +ALLK P + +DI+ AL Sbjct: 194 TELLLSH-----LPKLEGR----VLDFGCGAGVITVALLKAMPKLELECIDINAMALASC 244 Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174 + N + + SD + V G FD I+SNPP+ Sbjct: 245 ELTLQANKLQAK--VYPSDGLTQVTGAFDAIISNPPF 279 >gi|222054578|ref|YP_002536940.1| methyltransferase small [Geobacter sp. FRC-32] gi|221563867|gb|ACM19839.1| methyltransferase small [Geobacter sp. FRC-32] Length = 259 Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 32/84 (38%), Positives = 46/84 (54%), Gaps = 6/84 (7%) Query: 96 RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155 R+ RI DLGTG G + L L K++ VG+D +A+ N + NG +R L Sbjct: 39 REGGRIADLGTGCGIIPLLLAKQNKSATIVGIDFQEHMAALARHNVILNGYDDRVSILTE 98 Query: 156 DWFSSVEGL-----FDVIVSNPPY 174 D +S++G FD++VSNPPY Sbjct: 99 D-IASLKGHFPVSSFDLVVSNPPY 121 >gi|306818472|ref|ZP_07452195.1| protein-(glutamine-N5) methyltransferase [Mobiluncus mulieris ATCC 35239] gi|304648645|gb|EFM45947.1| protein-(glutamine-N5) methyltransferase [Mobiluncus mulieris ATCC 35239] Length = 330 Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 71/294 (24%), Positives = 111/294 (37%), Gaps = 62/294 (21%) Query: 21 QVIVDPDSVLDDR------QRFFLTNAIVRSLKHE-SIHRILGWRDFYNVRLTLSSDTFE 73 Q +++ + D+R Q FF A+V H + ++G F ++L F Sbjct: 37 QHVLEHPPLYDERLDAAKYQEFF---ALVGQRAHRVPLQHVMGEMYFRGLKLRARPGVFV 93 Query: 74 PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133 RPETE + ++ + + + ++LDLG G+GA+ LA+ E VDIS +A Sbjct: 94 VRPETEWVAEAGIETAQVWGAQGIPPQVLDLGCGSGALGLAVAAEVADTVLTSVDISPEA 153 Query: 134 LEIAKSNAVTNGVSER------------FDTLQSD----------WFSSVEG-------- 163 + + + NA G+ R L +D ++ EG Sbjct: 154 VALTQENADLCGIKARVILADATDLGGLISALTADSRLAPHETDRKAAATEGECQTEAAP 213 Query: 164 ---------------LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208 F VIV+NPPY+ + E P+ GG DGL R Sbjct: 214 HESENNGANETKATPKFHVIVTNPPYVIETVTQP---EAAADPPQALYGGGTDGLDIPRR 270 Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAF--KDYGGNDRVL 260 + ++ L G +E G Q +V +R L A KD G R L Sbjct: 271 FLENAAKLLVSGGTVVMEHGETQGEALV--VAARDLGFARAHIEKDLAGRPRFL 322 >gi|229159274|ref|ZP_04287298.1| hypothetical protein bcere0009_870 [Bacillus cereus R309803] gi|228624166|gb|EEK80968.1| hypothetical protein bcere0009_870 [Bacillus cereus R309803] Length = 158 Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 37/90 (41%), Positives = 52/90 (57%), Gaps = 11/90 (12%) Query: 87 AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV---DISCKALEIAKSNAVT 143 AF +P I K D ILD+G G G + L+L KE F+G V D++ +AL +AK NA Sbjct: 11 AFQMPDI-KGD---ILDVGCGYGPIGLSLAKE---FQGCNVHMVDVNERALGLAKENAAN 63 Query: 144 NGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173 N + E QS + +V+G + I+SNPP Sbjct: 64 NRI-ENIRIFQSSVYENVDGKYAAILSNPP 92 >gi|145629135|ref|ZP_01784934.1| 16S ribosomal RNA m2G1207 methyltransferase [Haemophilus influenzae 22.1-21] gi|145639699|ref|ZP_01795302.1| 16S ribosomal RNA m2G1207 methyltransferase [Haemophilus influenzae PittII] gi|260582074|ref|ZP_05849869.1| 16S ribosomal RNA methyltransferase [Haemophilus influenzae NT127] gi|144978638|gb|EDJ88361.1| 16S ribosomal RNA m2G1207 methyltransferase [Haemophilus influenzae 22.1-21] gi|145271256|gb|EDK11170.1| 16S ribosomal RNA m2G1207 methyltransferase [Haemophilus influenzae PittII] gi|260094964|gb|EEW78857.1| 16S ribosomal RNA methyltransferase [Haemophilus influenzae NT127] gi|309750669|gb|ADO80653.1| 16S rRNA m2G1207 methylase [Haemophilus influenzae R2866] Length = 330 Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 32/97 (32%), Positives = 51/97 (52%), Gaps = 2/97 (2%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 +D+ L I+ + ++LDLG G G + + K SP + DI ALE A+ Sbjct: 175 LDTGTGLLLSTIDNKIKGKVLDLGCGAGVIGSMIKKCSPNAQITMTDIHAMALESARKTL 234 Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESV 178 N + + + SD FS V+G FD+I+SNPP+ + + Sbjct: 235 SENQL--QGEVYASDVFSDVQGKFDLIISNPPFHDGI 269 >gi|50310425|ref|XP_455232.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|49644368|emb|CAG97940.1| KLLA0F03355p [Kluyveromyces lactis] Length = 295 Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 57/232 (24%), Positives = 94/232 (40%), Gaps = 43/232 (18%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110 + IL + F + L + PR ETE +A LP ++ ++LDL +G+G Sbjct: 63 LQYILKTQPFGPLDLLVRPGVLIPRWETEEWCMDLIA-KLPEKARQGQFKVLDLCSGSGC 121 Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEGL----- 164 + LA+ + VD+S KA+ + K N G+ +Q+D E + Sbjct: 122 IALAIAHTRTEYIVKSVDLSPKAIALLKDNVRKVGLQNTNVQCIQADILRHSEHIYSKDK 181 Query: 165 FDVIVSNPPYIES--VIVDCLGLEVRDFDPRISLDGG----------------------- 199 F++I NPPYI S + +C V+ ++PR++L Sbjct: 182 FNLITCNPPYIPSNNFVKEC-TTSVKLYEPRLALVADLEFYDNLLQYWIPRTESFVYEVG 240 Query: 200 --------IDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK--VDVVRIFES 241 I+GLSH + G+ N C N + +D V+IF+S Sbjct: 241 DMKQCQHVINGLSHNTSWKTGIKYDSNDKPRCVYGYLANPESTIDYVKIFDS 292 >gi|307700840|ref|ZP_07637865.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Mobiluncus mulieris FB024-16] gi|307613835|gb|EFN93079.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Mobiluncus mulieris FB024-16] Length = 330 Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 65/273 (23%), Positives = 101/273 (36%), Gaps = 52/273 (19%) Query: 34 QRFFLTNAIVRSLKHE-SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPR 92 Q FF A+V H + ++G F ++L F RPETE + ++ + + Sbjct: 56 QEFF---ALVGQRAHRVPLQHVMGEMYFRGLKLRARPGVFVVRPETEWVAEAGIETAQVW 112 Query: 93 IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER--- 149 + ++LDLG G+GA+ LA+ E + VDIS +A+ + + NA G+ R Sbjct: 113 GAQGIPPQVLDLGCGSGALGLAVAAEVADTVLISVDISPEAVALTQENADLCGIKARVIL 172 Query: 150 ---------FDTLQSD----------WFSSVEG-----------------------LFDV 167 L +D ++ EG F V Sbjct: 173 ADATDLGGLISALTADSRLAPHETDRKAAATEGECQTEAAPHESENNGANETKATPKFHV 232 Query: 168 IVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227 IV+NPPY+ + E P+ GG DGL R + ++ L G +E Sbjct: 233 IVTNPPYVIETVTQP---EAAADPPQALYGGGTDGLDIPRRFLENAAKLLVAGGTVVMEH 289 Query: 228 GYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 G Q +V + KD G R L Sbjct: 290 GETQGEALVVAARDLGFGRAHIEKDLAGRPRFL 322 >gi|300781421|ref|ZP_07091275.1| N5-glutamine methyltransferase [Corynebacterium genitalium ATCC 33030] gi|300533128|gb|EFK54189.1| N5-glutamine methyltransferase [Corynebacterium genitalium ATCC 33030] Length = 311 Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 57/203 (28%), Positives = 90/203 (44%), Gaps = 16/203 (7%) Query: 40 NAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALA--------FSLP 91 A+ R KHE + RI+G F L + F PRPETE+L + A+A S Sbjct: 65 EAVSRREKHEPLQRIIGTAPFGIHDLKVGPGVFIPRPETEVLAEWAVAAFAEYLDSLSDD 124 Query: 92 RIEKRDVVR-ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-- 148 I+ D ++DLGTG+GA+ + + + +GV+ S AL A++NA +G Sbjct: 125 EIDAPDFQPVVVDLGTGSGALAIYIAQRVDADLVIGVEKSPVALAAARANADEHGGRGAE 184 Query: 149 ----RFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDF-DPRISLDGGIDGL 203 D G ++V+NPPY+ + L+ + DP ++ G DG+ Sbjct: 185 IQIISGDMTDPHLLEEYSGKVGLVVANPPYVPFEPEESGALQPEIYHDPPEAVFSGADGM 244 Query: 204 SHYRTIADGVSRHLNKDGLCSVE 226 R + +R L G +E Sbjct: 245 DAIRGLIPVAARLLAPGGKLGIE 267 >gi|306831419|ref|ZP_07464577.1| methyltransferase domain protein [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|304426204|gb|EFM29318.1| methyltransferase domain protein [Streptococcus gallolyticus subsp. gallolyticus TX20005] Length = 197 Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 29/73 (39%), Positives = 45/73 (61%), Gaps = 3/73 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LDLG G G + ++L K + VDI+ +A+++A+ NA NGV+ + QS+ + Sbjct: 61 LLDLGCGYGPLGISLAKVQGV-QATMVDINNRAIDLAQKNAEKNGVTA--NIFQSNIYEK 117 Query: 161 VEGLFDVIVSNPP 173 V G FD I+SNPP Sbjct: 118 VTGTFDYIISNPP 130 >gi|187925511|ref|YP_001897153.1| methyltransferase small [Burkholderia phytofirmans PsJN] gi|187716705|gb|ACD17929.1| methyltransferase small [Burkholderia phytofirmans PsJN] Length = 374 Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 40/125 (32%), Positives = 63/125 (50%), Gaps = 9/125 (7%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 VD + LP + K D+GTGTG V ALL + K V D +AL A+ N Sbjct: 185 VDLVASTPLPSLNK-----AFDIGTGTG-VLSALLAKRGVKKIVATDQDPRALACARENL 238 Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201 G ++ D +Q+D F EG ++VSNPP++ + + + D + R+ L G ++ Sbjct: 239 TRLGYDQQVDVVQADLFP--EGRAPLVVSNPPWVPARPASPIEYAIYDPESRMLL-GFLN 295 Query: 202 GLSHY 206 GL+ + Sbjct: 296 GLAEH 300 >gi|153853634|ref|ZP_01995014.1| hypothetical protein DORLON_01005 [Dorea longicatena DSM 13814] gi|149753789|gb|EDM63720.1| hypothetical protein DORLON_01005 [Dorea longicatena DSM 13814] Length = 248 Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 32/98 (32%), Positives = 56/98 (57%), Gaps = 6/98 (6%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 +D+ L + R++K + + LDLGTGTG + + L + P G++I ++ ++A+ + Sbjct: 32 MDAVLLSAFARVKKNE--KALDLGTGTGILPILLEAKYPGLHYTGLEIQEESADMARRSV 89 Query: 142 VTNGVSERFDTLQSDW--FSSVEGL--FDVIVSNPPYI 175 NG+ ER D + D +S+ G F VI +NPPY+ Sbjct: 90 SYNGLEERIDIVTGDIKEAASIFGAASFGVITTNPPYM 127 >gi|145633431|ref|ZP_01789161.1| 16S ribosomal RNA m2G1207 methyltransferase [Haemophilus influenzae 3655] gi|144985994|gb|EDJ92596.1| 16S ribosomal RNA m2G1207 methyltransferase [Haemophilus influenzae 3655] Length = 330 Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 30/85 (35%), Positives = 47/85 (55%), Gaps = 2/85 (2%) Query: 90 LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 L I+ + ++LDLG G G + + K +P + DI ALE A+ N + + Sbjct: 183 LSTIDNKIKGKVLDLGCGAGVIGSMIKKRAPNAQITMTDIHAMALESARKTLSENQL--Q 240 Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPY 174 + SD FS++EG FD+I+SNPP+ Sbjct: 241 GEVYASDVFSNIEGKFDLIISNPPF 265 >gi|288905339|ref|YP_003430561.1| hypothetical protein GALLO_1138 [Streptococcus gallolyticus UCN34] gi|325978326|ref|YP_004288042.1| ribosomal RNA small subunit methyltransferase C [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|288732065|emb|CBI13630.1| conserved hypothetical protein [Streptococcus gallolyticus UCN34] gi|325178254|emb|CBZ48298.1| ribosomal RNA small subunit methyltransferase C [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 197 Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 29/73 (39%), Positives = 45/73 (61%), Gaps = 3/73 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LDLG G G + ++L K + VDI+ +A+++A+ NA NGV+ + QS+ + Sbjct: 61 LLDLGCGYGPLGISLAKVQGV-QATMVDINNRAIDLAQKNAEKNGVTA--NIFQSNIYEK 117 Query: 161 VEGLFDVIVSNPP 173 V G FD I+SNPP Sbjct: 118 VTGTFDYIISNPP 130 >gi|15597375|ref|NP_250869.1| hypothetical protein PA2179 [Pseudomonas aeruginosa PAO1] gi|218891868|ref|YP_002440735.1| putative methylase [Pseudomonas aeruginosa LESB58] gi|9948200|gb|AAG05567.1|AE004645_1 hypothetical protein PA2179 [Pseudomonas aeruginosa PAO1] gi|218772094|emb|CAW27873.1| putative methylase [Pseudomonas aeruginosa LESB58] Length = 316 Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 39/113 (34%), Positives = 58/113 (51%), Gaps = 8/113 (7%) Query: 66 TLSSDTFEPRPET---ELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 TL++D P+T + L+ S LA S P + R D+G G G + + P Sbjct: 106 TLAADAVFFGPDTYRFDRLIRSHLASSDPA----RIRRAADIGCGAGPGAIRIAMACPDA 161 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYI 175 + G+DI+ AL++A+ NA GV +SD S G FD+IV+NPPY+ Sbjct: 162 EVHGLDINPAALDLARVNAALAGVGN-LTLARSDLLSQAPGRFDLIVANPPYL 213 >gi|150387943|ref|YP_001317992.1| methyltransferase small [Alkaliphilus metalliredigens QYMF] gi|149947805|gb|ABR46333.1| methyltransferase small [Alkaliphilus metalliredigens QYMF] Length = 255 Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 32/98 (32%), Positives = 53/98 (54%), Gaps = 6/98 (6%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 +D+ L + ++K R++DLGTGTG + + L +S G++I + E+A+ + Sbjct: 32 IDAVLLANFVTLKKN--ARVVDLGTGTGIIPILLAGKSESSHVTGIEIQEEVAEMAQRSV 89 Query: 142 VTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPYI 175 NG+ R D L D + + L FDV+ SNPPY+ Sbjct: 90 KLNGLECRIDILPMDLKEAPQVLPVNSFDVVTSNPPYM 127 >gi|225621207|ref|YP_002722465.1| methyltransferase small domain-containing protein [Brachyspira hyodysenteriae WA1] gi|225216027|gb|ACN84761.1| methyltransferase small domain protein [Brachyspira hyodysenteriae WA1] Length = 213 Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 39/113 (34%), Positives = 57/113 (50%), Gaps = 7/113 (6%) Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 ++ T + F P+ +D + I D +ILDLG G G V + K Sbjct: 13 LKFTSNDKLFSPKN-----IDIGTLSMINEINFEDENKILDLGCGYGVVGILAAKIIGED 67 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS-VEGLFDVIVSNPPY 174 K V DI +A+EI+K NAV N VS + +QSD + ++ F +I+SNPPY Sbjct: 68 KVVMCDIDAEAVEISKHNAVLNNVS-NINIIQSDGLRNIIDNDFSMILSNPPY 119 >gi|170017869|ref|YP_001728788.1| 16S RNA G1207 methylase RsmC [Leuconostoc citreum KM20] gi|169804726|gb|ACA83344.1| 16S RNA G1207 methylase RsmC [Leuconostoc citreum KM20] Length = 213 Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 28/74 (37%), Positives = 46/74 (62%), Gaps = 1/74 (1%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 +ILDLGTG G V +A+ K + VD++ +ALE+A+ NA NGV++ QS+ + Sbjct: 70 KILDLGTGYGPVGIAIAKAMSRQVDM-VDVNERALELAQQNAQKNGVTQLTRIFQSNIYD 128 Query: 160 SVEGLFDVIVSNPP 173 + + +I++NPP Sbjct: 129 KITDKYALILTNPP 142 >gi|49084994|gb|AAT51244.1| PA2179 [synthetic construct] Length = 317 Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 39/113 (34%), Positives = 58/113 (51%), Gaps = 8/113 (7%) Query: 66 TLSSDTFEPRPET---ELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 TL++D P+T + L+ S LA S P + R D+G G G + + P Sbjct: 106 TLAADAVFFGPDTYRFDRLIRSHLASSDPA----RIRRAADIGCGAGPGAIRIAMACPDA 161 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYI 175 + G+DI+ AL++A+ NA GV +SD S G FD+IV+NPPY+ Sbjct: 162 EVHGLDINPAALDLARVNAALAGVGN-LTLARSDLLSQAPGRFDLIVANPPYL 213 >gi|50547103|ref|XP_501021.1| YALI0B17534p [Yarrowia lipolytica] gi|49646887|emb|CAG83274.1| YALI0B17534p [Yarrowia lipolytica] Length = 299 Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 56/224 (25%), Positives = 103/224 (45%), Gaps = 26/224 (11%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTG 109 + ++G + F ++ + + PR ETE L+ L + +R+ +R++DL TGTG Sbjct: 64 LQYVIGNQPFGSLNIDCRKNVLIPRSETEEWA-CHLSNLLKTLARRNKDMRLVDLCTGTG 122 Query: 110 AVCLAL-LKESPFFKGVGVDISCKALEIAKSNAVTNGVS--------ERFDTLQSDWFSS 160 C+AL + P G+D+S AL +A+ N N S E+ D L + Sbjct: 123 --CIALQMATLPLALVAGIDVSSDALNLAEHNEKLNQTSLRADKVIFEQLDILDPKNDAK 180 Query: 161 VEGLFDVIVS-NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 + L I++ NPPY+ S VD V+ +P++++ GG + + ++R N Sbjct: 181 IAALHPTIITANPPYV-SHEVDA-AQAVKKHEPKLAVFGGNE-------FYEAIARITNN 231 Query: 220 DGLCSV--EIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 G ++ E+GY + + + + + FKD+ R + Sbjct: 232 SGAQALVTEVGYLDQANYTQSLLPKDWSSI-VFKDFSDRPRAVF 274 >gi|307129409|ref|YP_003881425.1| Ribosomal RNA small subunit methyltransferase C [Dickeya dadantii 3937] gi|306526938|gb|ADM96868.1| Ribosomal RNA small subunit methyltransferase C [Dickeya dadantii 3937] Length = 342 Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 29/106 (27%), Positives = 53/106 (50%), Gaps = 2/106 (1%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 +D+ L +E ++LDL G G + + + SP + D+ ALE ++S Sbjct: 181 LDTGSQLLLSTLEPHRKGKVLDLACGAGVLAASFARLSPKIRLTLSDVGAAALEASRSTL 240 Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEV 187 NG+ + + S+ +S ++G FD+I+SNPP+ + + EV Sbjct: 241 AANGLEGQ--VIASNAYSDIQGRFDLIISNPPFHDGMQTSLHAAEV 284 >gi|226323868|ref|ZP_03799386.1| hypothetical protein COPCOM_01643 [Coprococcus comes ATCC 27758] gi|225207417|gb|EEG89771.1| hypothetical protein COPCOM_01643 [Coprococcus comes ATCC 27758] Length = 166 Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 45/147 (30%), Positives = 75/147 (51%), Gaps = 8/147 (5%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVL--DDRQRFFLTNAIVRSLKHE-SIHRILGWRDFYN 62 DS L VTG+ + VD + ++ RFF +V K + + G ++F Sbjct: 25 DSWILLEHVTGMIRTRYYVDGFERMPKNEEDRFF---ELVSCRKTRIPVQHLTGVQEFMG 81 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 ++ PR +TE+LV+ A L ++K + V++LD+ TG+G + ++L +P Sbjct: 82 YEFAVNEHVLVPRQDTEILVEEA-EKRLLLMKKENPVKVLDMCTGSGCIPISLKLRNPQI 140 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSER 149 G DIS +AL++A+ NA G SER Sbjct: 141 VIEGADISEEALKVAEKNAKKAG-SER 166 >gi|256833417|ref|YP_003162144.1| methyltransferase small [Jonesia denitrificans DSM 20603] gi|256686948|gb|ACV09841.1| methyltransferase small [Jonesia denitrificans DSM 20603] Length = 536 Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 49/170 (28%), Positives = 83/170 (48%), Gaps = 13/170 (7%) Query: 87 AFSLPRIEKR-DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145 +F+L ++ R +V R+LD+GTG G LA + + + + DIS +A+ A+ NA N Sbjct: 173 SFTLAQVTPRTNVGRVLDIGTGCGVQALAATRHA--RQVMATDISPRAVAFARFNAALN- 229 Query: 146 VSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204 + + +F V G FD++VSNPP+ VI G ++ ++ R DGG G Sbjct: 230 -DSDVEIREGSFFEPVHGETFDLVVSNPPF---VITPRTGTDLALYEYR---DGGAAGDR 282 Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYG 254 + V ++L G C+V +G + R E + ++ A +G Sbjct: 283 VVAQMVTDVPQYLAAGG-CAVMLGNWEVTAGSRWDEGPRAWIEQARALHG 331 >gi|251793049|ref|YP_003007775.1| 16S ribosomal RNA m2G1207 methyltransferase [Aggregatibacter aphrophilus NJ8700] gi|247534442|gb|ACS97688.1| ribosomal RNA small subunit methyltransferase C [Aggregatibacter aphrophilus NJ8700] Length = 334 Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 31/78 (39%), Positives = 43/78 (55%), Gaps = 2/78 (2%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LD+G G G + + K P K V DI ALE A+ N + + L SD FS Sbjct: 198 VLDIGCGAGVIGSYIQKHHPKTKLVMTDIHAMALESAQRTLRENQL--QGTVLASDVFSH 255 Query: 161 VEGLFDVIVSNPPYIESV 178 VEG FD+I+SNPP+ + + Sbjct: 256 VEGKFDLIISNPPFHDGI 273 >gi|291299303|ref|YP_003510581.1| methyltransferase small [Stackebrandtia nassauensis DSM 44728] gi|290568523|gb|ADD41488.1| methyltransferase small [Stackebrandtia nassauensis DSM 44728] Length = 378 Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 44/146 (30%), Positives = 66/146 (45%), Gaps = 20/146 (13%) Query: 76 PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135 P + VD A LP + + D+GTGTG + L K + V DI+ +A+E Sbjct: 183 PTRDEYVDLVAAAPLP-----EGATVFDIGTGTGVLAALLAKRG--ARVVATDIAPRAVE 235 Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195 A N G+ +R + +++D F G DV++ NPP++ L V D R+ Sbjct: 236 CAADNMTRLGLDDRVEVVEADLFPP--GRADVVLCNPPWLPGTPNSTLDAAVFDHGGRM- 292 Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDG 221 LS + DGV+ HLN G Sbjct: 293 -------LSGF---LDGVAAHLNPGG 308 >gi|158312865|ref|YP_001505373.1| HemK family modification methylase [Frankia sp. EAN1pec] gi|158108270|gb|ABW10467.1| modification methylase, HemK family [Frankia sp. EAN1pec] Length = 334 Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 48/184 (26%), Positives = 77/184 (41%), Gaps = 30/184 (16%) Query: 50 SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI-----LDL 104 + + G F ++ + + F PRPETE + + A+A + D V +DL Sbjct: 82 PLQHLTGLAGFRHLDIAVGPGVFIPRPETEWVAEWAIAA----LRSPDAVVAGRPICVDL 137 Query: 105 GTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD-------- 156 G+GA+ L++ E P + V++ AL + N G+ R Q+D Sbjct: 138 CAGSGAIALSVADEVPNAEVHAVELEPAALGWLRRNVERTGLPVRVH--QADVGIPRSPT 195 Query: 157 -----------WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSH 205 + + G DV++SNPPY+ + EV DP +L GG DGL Sbjct: 196 DAGRPVAPVGTVLTDLAGRADVVISNPPYLPDHERPRVEPEVGRHDPPAALWGGPDGLDG 255 Query: 206 YRTI 209 R + Sbjct: 256 PRAV 259 >gi|116050122|ref|YP_791063.1| hypothetical protein PA14_36390 [Pseudomonas aeruginosa UCBPP-PA14] gi|115585343|gb|ABJ11358.1| putative methylase [Pseudomonas aeruginosa UCBPP-PA14] Length = 316 Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 39/113 (34%), Positives = 58/113 (51%), Gaps = 8/113 (7%) Query: 66 TLSSDTFEPRPET---ELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 TL++D P+T + L+ S LA S P + R D+G G G + + P Sbjct: 106 TLAADAVFFGPDTYRFDRLIRSHLASSDPA----RIRRAADIGCGAGPGAIRIAMACPDA 161 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYI 175 + G+DI+ AL++A+ NA GV +SD S G FD+IV+NPPY+ Sbjct: 162 EVHGLDINPAALDLARVNAALAGVGN-LTLARSDLLSQAPGRFDLIVANPPYL 213 >gi|313110982|ref|ZP_07796822.1| putative methylase [Pseudomonas aeruginosa 39016] gi|310883324|gb|EFQ41918.1| putative methylase [Pseudomonas aeruginosa 39016] Length = 316 Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 39/113 (34%), Positives = 58/113 (51%), Gaps = 8/113 (7%) Query: 66 TLSSDTFEPRPET---ELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 TL++D P+T + L+ S LA S P + R D+G G G + + P Sbjct: 106 TLAADAVFFGPDTYRFDRLIRSHLASSDPA----RIRRAADIGCGAGPGAIRIAMACPDA 161 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYI 175 + G+DI+ AL++A+ NA GV +SD S G FD+IV+NPPY+ Sbjct: 162 EVHGLDINPAALDLARVNAALAGVGN-LTLARSDLLSQAPGRFDLIVANPPYL 213 >gi|226228550|ref|YP_002762656.1| putative methyltransferase [Gemmatimonas aurantiaca T-27] gi|226091741|dbj|BAH40186.1| putative methyltransferase [Gemmatimonas aurantiaca T-27] Length = 546 Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 43/131 (32%), Positives = 61/131 (46%), Gaps = 16/131 (12%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+L+L +GTG L K VDI+ + A NA N + E +LQ D ++ Sbjct: 196 RVLELCSGTGVATLMAAKAG-ATHAWAVDITERCTHFAAFNARLNDL-EHVTSLQGDLYA 253 Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 +EG FD IV++PPYI S + I DGG DG R I + +L Sbjct: 254 PLEGQQFDCIVAHPPYIPSTSTEI-----------IYRDGGEDGEQITRAIIGKLPEYLA 302 Query: 219 KDGL--CSVEI 227 DG+ C+ +I Sbjct: 303 LDGIFHCTCQI 313 >gi|325687971|gb|EGD29991.1| methyltransferase domain protein [Streptococcus sanguinis SK72] gi|327469474|gb|EGF14943.1| methyltransferase domain protein [Streptococcus sanguinis SK330] Length = 195 Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 30/74 (40%), Positives = 44/74 (59%), Gaps = 3/74 (4%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+LD+G G G + L L K + +DI+ +AL++A+ NA N VS QS+ + Sbjct: 60 RVLDVGCGYGPLGLTLAK-AQGVAATMLDINQRALDLAQKNAERNQVSAHI--FQSNVYE 116 Query: 160 SVEGLFDVIVSNPP 173 V G+FD I+SNPP Sbjct: 117 KVNGIFDHIISNPP 130 >gi|319946685|ref|ZP_08020919.1| methyltransferase domain protein [Streptococcus australis ATCC 700641] gi|319746733|gb|EFV98992.1| methyltransferase domain protein [Streptococcus australis ATCC 700641] Length = 197 Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 29/73 (39%), Positives = 45/73 (61%), Gaps = 3/73 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LD+G G G + L+L+K + VD++ +AL++A+ NA N V + QS+ + Sbjct: 61 VLDVGCGYGPLGLSLVKAQGIHATM-VDVNTRALDLAQKNADLNQVEAKI--FQSNVYDQ 117 Query: 161 VEGLFDVIVSNPP 173 VEG FD I+SNPP Sbjct: 118 VEGSFDHIISNPP 130 >gi|229067866|ref|ZP_04201183.1| hypothetical protein bcere0025_900 [Bacillus cereus F65185] gi|229176701|ref|ZP_04304105.1| hypothetical protein bcere0005_880 [Bacillus cereus 172560W] gi|228606744|gb|EEK64161.1| hypothetical protein bcere0005_880 [Bacillus cereus 172560W] gi|228715225|gb|EEL67084.1| hypothetical protein bcere0025_900 [Bacillus cereus F65185] Length = 213 Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 37/96 (38%), Positives = 55/96 (57%), Gaps = 8/96 (8%) Query: 78 TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137 + LL++ AF +P I K D ILD+G G G + L+L KE + VD++ +AL +A Sbjct: 60 SRLLIE---AFQMPDI-KGD---ILDVGCGYGPIGLSLAKEFQGREVHMVDVNERALGLA 112 Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173 K NA N + E QS + +V+G + I+SNPP Sbjct: 113 KENAANNKI-ENIRIFQSSVYENVDGKYAAILSNPP 147 >gi|311744554|ref|ZP_07718354.1| methyltransferase [Aeromicrobium marinum DSM 15272] gi|311312173|gb|EFQ82090.1| methyltransferase [Aeromicrobium marinum DSM 15272] Length = 488 Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 42/141 (29%), Positives = 63/141 (44%), Gaps = 14/141 (9%) Query: 95 KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154 + V R LDLGTG G L L + + + V D++ +AL +A+ A NGV+ D + Sbjct: 151 RTPVARALDLGTGCGVQALHLAQHA--DRVVATDVNPRALAMAELTASLNGVT--VDVRR 206 Query: 155 SDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213 F V FD++ +NPP++ S D D + + G +G R I G Sbjct: 207 GSLFEPVATERFDLVATNPPFVVSP---------PDGDRLVYRETGFEGDEVVRRIVQGA 257 Query: 214 SRHLNKDGLCSVEIGYNQKVD 234 HL + G C V + D Sbjct: 258 PDHLTEHGWCQVLASWIHPAD 278 >gi|289177356|gb|ADC84602.1| 16S rRNA m(2)G 1207 methyltransferase [Bifidobacterium animalis subsp. lactis BB-12] Length = 255 Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 38/99 (38%), Positives = 54/99 (54%), Gaps = 8/99 (8%) Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 LDLG G GA+ LAL ESP VD++ +A+E+A+SNA NG + + + V Sbjct: 116 LDLGCGWGAIALALALESPEATVYAVDVNERAIELARSNAEANGCG----NIHAGTAAVV 171 Query: 162 EG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG 198 G FDVI SNPP + + L + ++ PR+ DG Sbjct: 172 PGDVRFDVIWSNPPI--RIGKEALHELLMEWLPRLVSDG 208 >gi|183602406|ref|ZP_02963772.1| hypothetical protein BIFLAC_05155 [Bifidobacterium animalis subsp. lactis HN019] gi|241191240|ref|YP_002968634.1| hypothetical protein Balac_1216 [Bifidobacterium animalis subsp. lactis Bl-04] gi|241196646|ref|YP_002970201.1| hypothetical protein Balat_1216 [Bifidobacterium animalis subsp. lactis DSM 10140] gi|183218325|gb|EDT88970.1| hypothetical protein BIFLAC_05155 [Bifidobacterium animalis subsp. lactis HN019] gi|240249632|gb|ACS46572.1| hypothetical protein Balac_1216 [Bifidobacterium animalis subsp. lactis Bl-04] gi|240251200|gb|ACS48139.1| hypothetical protein Balat_1216 [Bifidobacterium animalis subsp. lactis DSM 10140] gi|295794233|gb|ADG33768.1| hypothetical protein BalV_1180 [Bifidobacterium animalis subsp. lactis V9] Length = 209 Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 38/99 (38%), Positives = 54/99 (54%), Gaps = 8/99 (8%) Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 LDLG G GA+ LAL ESP VD++ +A+E+A+SNA NG + + + V Sbjct: 70 LDLGCGWGAIALALALESPEATVYAVDVNERAIELARSNAEANGCG----NIHAGTAAVV 125 Query: 162 EG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG 198 G FDVI SNPP + + L + ++ PR+ DG Sbjct: 126 PGDVRFDVIWSNPPI--RIGKEALHELLMEWLPRLVSDG 162 >gi|296389401|ref|ZP_06878876.1| hypothetical protein PaerPAb_14676 [Pseudomonas aeruginosa PAb1] Length = 316 Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 39/113 (34%), Positives = 58/113 (51%), Gaps = 8/113 (7%) Query: 66 TLSSDTFEPRPET---ELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 TL++D P+T + L+ S LA S P + R D+G G G + + P Sbjct: 106 TLAADAVFFGPDTYRFDRLIRSHLASSDPA----RIRRAADIGCGAGPGAIRIAMACPDA 161 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYI 175 + G+DI+ AL++A+ NA GV +SD S G FD+IV+NPPY+ Sbjct: 162 EVHGLDINPAALDLARVNAALAGVGN-LTLARSDLLSQAPGRFDLIVANPPYL 213 >gi|107101605|ref|ZP_01365523.1| hypothetical protein PaerPA_01002649 [Pseudomonas aeruginosa PACS2] Length = 316 Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 39/113 (34%), Positives = 58/113 (51%), Gaps = 8/113 (7%) Query: 66 TLSSDTFEPRPET---ELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 TL++D P+T + L+ S LA S P + R D+G G G + + P Sbjct: 106 TLAADAVFFGPDTYRFDRLIRSHLASSDPA----RIRRAADIGCGAGPGAIRIAMACPDA 161 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYI 175 + G+DI+ AL++A+ NA GV +SD S G FD+IV+NPPY+ Sbjct: 162 EVHGLDINPAALDLARVNAALAGVGN-LTLARSDLLSQAPGRFDLIVANPPYL 213 >gi|254235205|ref|ZP_04928528.1| hypothetical protein PACG_01095 [Pseudomonas aeruginosa C3719] gi|126167136|gb|EAZ52647.1| hypothetical protein PACG_01095 [Pseudomonas aeruginosa C3719] Length = 316 Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 39/113 (34%), Positives = 58/113 (51%), Gaps = 8/113 (7%) Query: 66 TLSSDTFEPRPET---ELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 TL++D P+T + L+ S LA S P + R D+G G G + + P Sbjct: 106 TLAADAVFFGPDTYRFDRLIRSHLASSDPA----RIRRAADIGCGAGPGAIRIAMACPDA 161 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYI 175 + G+DI+ AL++A+ NA GV +SD S G FD+IV+NPPY+ Sbjct: 162 EVHGLDINPAALDLARVNAALAGVGN-LTLARSDLLSQAPGRFDLIVANPPYL 213 >gi|309808054|ref|ZP_07701972.1| conserved hypothetical protein [Lactobacillus iners LactinV 01V1-a] gi|308168656|gb|EFO70756.1| conserved hypothetical protein [Lactobacillus iners LactinV 01V1-a] Length = 223 Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 54/192 (28%), Positives = 89/192 (46%), Gaps = 15/192 (7%) Query: 11 LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70 L L+ Q + D L Q + + + K S I+G F + + Sbjct: 27 LAERQNLTPSQYRLQLDQDLPKEQLTQIKKDLNKLHKGMSPQYIVGHAWFLGYSIDVHPG 86 Query: 71 TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV----- 125 PR ETE LV AL + +D ++LDLGTG+GA+ +AL K++ K + Sbjct: 87 VLIPRFETEELVTWALDYL------KDNSKVLDLGTGSGAITVALAKKAE-CKNINNIVY 139 Query: 126 -GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184 DI+ AL ++ N + +++ T ++D +E FD+I+SNPPYI++ D + Sbjct: 140 YASDITDSALRQSEENFLKFNLNDII-TRKADALIGLEK-FDLIISNPPYIKNSEKDLMD 197 Query: 185 LEVRDFDPRISL 196 V +P +L Sbjct: 198 QNVIKNEPEEAL 209 >gi|219683279|ref|YP_002469662.1| 16S RNA G1207 methylase RsmC precursor [Bifidobacterium animalis subsp. lactis AD011] gi|219620929|gb|ACL29086.1| putative 16S RNA G1207 methylase RsmC precursor [Bifidobacterium animalis subsp. lactis AD011] Length = 231 Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 38/99 (38%), Positives = 54/99 (54%), Gaps = 8/99 (8%) Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 LDLG G GA+ LAL ESP VD++ +A+E+A+SNA NG + + + V Sbjct: 92 LDLGCGWGAIALALALESPEATVYAVDVNERAIELARSNAEANGCG----NIHAGTAAVV 147 Query: 162 EG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG 198 G FDVI SNPP + + L + ++ PR+ DG Sbjct: 148 PGDVRFDVIWSNPPI--RIGKEALHELLMEWLPRLVSDG 184 >gi|229188386|ref|ZP_04315434.1| hypothetical protein bcere0002_880 [Bacillus cereus ATCC 10876] gi|228595060|gb|EEK52831.1| hypothetical protein bcere0002_880 [Bacillus cereus ATCC 10876] Length = 213 Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 37/96 (38%), Positives = 55/96 (57%), Gaps = 8/96 (8%) Query: 78 TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137 + LL++ AF +P I K D ILD+G G G + L+L KE + VD++ +AL +A Sbjct: 60 SRLLIE---AFQMPDI-KGD---ILDVGCGYGPIGLSLAKEFQGREVHMVDVNERALGLA 112 Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173 K NA N + E QS + +V+G + I+SNPP Sbjct: 113 KENAANNKI-ENIRIFQSSVYENVDGKYAAILSNPP 147 >gi|75763956|ref|ZP_00743584.1| 16S rRNA m(2)G 1207 methyltransferase [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|74488558|gb|EAO52146.1| 16S rRNA m(2)G 1207 methyltransferase [Bacillus thuringiensis serovar israelensis ATCC 35646] Length = 213 Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 37/96 (38%), Positives = 55/96 (57%), Gaps = 8/96 (8%) Query: 78 TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137 + LL++ AF +P I K D ILD+G G G + L+L KE + VD++ +AL +A Sbjct: 60 SRLLIE---AFQMPDI-KGD---ILDVGCGYGPIGLSLAKEFQGREVHMVDVNERALGLA 112 Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173 K NA N + E QS + +V+G + I+SNPP Sbjct: 113 KENAANNKI-ENIRIFQSSVYENVDGKYAAILSNPP 147 >gi|227875210|ref|ZP_03993352.1| possible polypeptide chain release factor methyltransferase [Mobiluncus mulieris ATCC 35243] gi|227844115|gb|EEJ54282.1| possible polypeptide chain release factor methyltransferase [Mobiluncus mulieris ATCC 35243] Length = 330 Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 68/292 (23%), Positives = 108/292 (36%), Gaps = 58/292 (19%) Query: 21 QVIVDPDSVLDDR------QRFFLTNAIVRSLKHE-SIHRILGWRDFYNVRLTLSSDTFE 73 Q +++ + D+R Q FF A+V H + ++G F ++L F Sbjct: 37 QHVLEHPPLYDERLDAAKYQEFF---ALVGQRAHRVPLQHVMGEMYFRGLKLRARPGVFV 93 Query: 74 PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133 RPETE + ++ + + + ++LDLG G+GA+ LA+ E VDIS +A Sbjct: 94 VRPETEWVAEAGIETAQVWGAQGIPPQVLDLGCGSGALGLAVAAEVADTVLTSVDISPEA 153 Query: 134 LEIAKSNAVTNGVSER------------FDTLQSD----------WFSSVEG-------- 163 + + + NA G+ R L +D ++ EG Sbjct: 154 VALTQENADLCGIKARVILADATDLGGLISALTADSRLAPHETDRKAAATEGECQTEAAP 213 Query: 164 ---------------LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208 F VIV+NPPY+ + E P+ GG DGL R Sbjct: 214 HESENNGANETKATPKFHVIVTNPPYVIETVTQP---EAAADPPQALYGGGTDGLDIPRR 270 Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 + ++ L G +E G Q +V + KD G R L Sbjct: 271 FLENAAKLLVAGGTVVMEHGETQGEALVVAARDLGFGRAHTEKDLAGRPRFL 322 >gi|228898854|ref|ZP_04063136.1| hypothetical protein bthur0014_880 [Bacillus thuringiensis IBL 4222] gi|228860754|gb|EEN05132.1| hypothetical protein bthur0014_880 [Bacillus thuringiensis IBL 4222] Length = 199 Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 39/99 (39%), Positives = 57/99 (57%), Gaps = 14/99 (14%) Query: 78 TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV---DISCKAL 134 + LL++ AF +P I K D ILD+G G G + L+L KE F+G V D++ +AL Sbjct: 46 SRLLIE---AFQMPDI-KGD---ILDVGCGYGPIGLSLAKE---FQGREVHMVDVNERAL 95 Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173 +AK NA N + E QS + +V+G + I+SNPP Sbjct: 96 GLAKENAANNKI-ENIRIFQSSVYENVDGKYAAILSNPP 133 >gi|206972250|ref|ZP_03233197.1| ybxB protein [Bacillus cereus AH1134] gi|228950649|ref|ZP_04112783.1| hypothetical protein bthur0006_890 [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|229077398|ref|ZP_04210055.1| hypothetical protein bcere0023_1120 [Bacillus cereus Rock4-2] gi|206732824|gb|EDZ49999.1| ybxB protein [Bacillus cereus AH1134] gi|228705911|gb|EEL58240.1| hypothetical protein bcere0023_1120 [Bacillus cereus Rock4-2] gi|228809000|gb|EEM55485.1| hypothetical protein bthur0006_890 [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 199 Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 35/87 (40%), Positives = 50/87 (57%), Gaps = 5/87 (5%) Query: 87 AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146 AF +P I K D ILD+G G G + L+L KE + VD++ +AL +AK NA N + Sbjct: 52 AFQMPDI-KGD---ILDVGCGYGPIGLSLAKEFQGREVHMVDVNERALGLAKENAANNKI 107 Query: 147 SERFDTLQSDWFSSVEGLFDVIVSNPP 173 E QS + +V+G + I+SNPP Sbjct: 108 -ENIRIFQSSVYENVDGKYAAILSNPP 133 >gi|313884753|ref|ZP_07818508.1| methyltransferase small domain protein [Eremococcus coleocola ACS-139-V-Col8] gi|312620014|gb|EFR31448.1| methyltransferase small domain protein [Eremococcus coleocola ACS-139-V-Col8] Length = 203 Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 31/74 (41%), Positives = 48/74 (64%), Gaps = 2/74 (2%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS- 159 ILDLG G GA+ +AL K P VGV+++ +AL +A++N N V E LQ+D S Sbjct: 63 ILDLGAGYGAMTIALAKLYPQAHLVGVELNERALNLAQTNQDLNRV-ESISWLQADATSI 121 Query: 160 SVEGLFDVIVSNPP 173 +++ +FD +++NPP Sbjct: 122 NLDVMFDFVITNPP 135 >gi|239636940|ref|ZP_04677938.1| methyltransferase small domain protein [Staphylococcus warneri L37603] gi|239597488|gb|EEQ79987.1| methyltransferase small domain protein [Staphylococcus warneri L37603] Length = 202 Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 33/97 (34%), Positives = 53/97 (54%), Gaps = 6/97 (6%) Query: 78 TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137 ++LL+ S L + P K I D+G G G + L + K SP + +D++ +ALE+A Sbjct: 45 SDLLIQSFLKANPPGPSKT----IADVGCGYGPIGLMIAKVSPHHQITMLDVNRRALELA 100 Query: 138 KSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPP 173 K N N + E D +SD + V + FD +++NPP Sbjct: 101 KKNKKKNHI-ENADIFESDGMTQVDDNQFDFVLTNPP 136 >gi|332360926|gb|EGJ38731.1| methyltransferase domain protein [Streptococcus sanguinis SK355] Length = 195 Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 29/74 (39%), Positives = 45/74 (60%), Gaps = 3/74 (4%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+LD+G G G + L+L K + VDI+ +AL++A+ NA N +S QS+ + Sbjct: 60 RVLDVGCGYGPLGLSLAK-AYGVAATMVDINQRALDLAQKNAERNQISAHI--FQSNVYE 116 Query: 160 SVEGLFDVIVSNPP 173 V G+FD ++SNPP Sbjct: 117 KVSGIFDHVISNPP 130 >gi|328946007|gb|EGG40153.1| methyltransferase domain protein [Streptococcus sanguinis SK1087] Length = 195 Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 31/74 (41%), Positives = 44/74 (59%), Gaps = 3/74 (4%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+LD+G G G + L+L K + VDI+ +AL +A+ NA N VS QS+ + Sbjct: 60 RVLDVGCGYGPLGLSLAK-AYGVAATMVDINQRALGLAQQNAERNQVSAHI--FQSNVYE 116 Query: 160 SVEGLFDVIVSNPP 173 V G+FD I+SNPP Sbjct: 117 KVSGIFDHIISNPP 130 >gi|219851215|ref|YP_002465647.1| methylase [Methanosphaerula palustris E1-9c] gi|219545474|gb|ACL15924.1| methylase [Methanosphaerula palustris E1-9c] Length = 188 Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 57/203 (28%), Positives = 92/203 (45%), Gaps = 29/203 (14%) Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L L+ ++P +T LL A + ++P R+L++GTG+G V AL Sbjct: 7 LFLNDQVYQPEADTLLLCRVACSTAMPDD------RVLEVGTGSGYVAAALKDCCTV--- 57 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184 VG+DI+ A+ AK+ V + ++SD + G FD+I+ NPPY+ + L Sbjct: 58 VGLDINPHAVMAAKARGV--------EVVRSDLCAGFRGPFDLILFNPPYLPT-----LP 104 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG----LCSVEIGYNQKVDVVRIFE 240 E D +LDGG+ G A V R L +G L S GY++ V IF Sbjct: 105 EERIDDWLEYALDGGLTGRDVIARFAAEVGRVLAPEGRILLLISSLTGYDE---VAAIFT 161 Query: 241 SRKLFLVNAFKDYGGNDRVLLFC 263 ++ A + ++ + + C Sbjct: 162 GLGFQIIRAADEQVCDELLSVLC 184 >gi|251799654|ref|YP_003014385.1| methyltransferase small [Paenibacillus sp. JDR-2] gi|247547280|gb|ACT04299.1| methyltransferase small [Paenibacillus sp. JDR-2] Length = 201 Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 30/76 (39%), Positives = 47/76 (61%), Gaps = 2/76 (2%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 ++LD+G G G + L K +P +DI+ +A+E++K NA NGVS +QSD + Sbjct: 59 AQVLDVGCGYGPIGLTAAKLAPEGHVTMIDINERAVELSKENAKLNGVS-NVTIVQSDIY 117 Query: 159 SSVE-GLFDVIVSNPP 173 SV+ +DVI++NPP Sbjct: 118 ESVKNNRYDVILTNPP 133 >gi|320101338|ref|YP_004176930.1| 16S rRNA m(2)G 1207 methyltransferase [Desulfurococcus mucosus DSM 2162] gi|319753690|gb|ADV65448.1| 16S rRNA m(2)G 1207 methyltransferase [Desulfurococcus mucosus DSM 2162] Length = 193 Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 36/116 (31%), Positives = 58/116 (50%), Gaps = 5/116 (4%) Query: 63 VRLTLSSDTFEPRPETELL----VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118 + LT+ +FE T L +D L I + +LD+G G G + + + + Sbjct: 16 IPLTIHGQSFEFLSYTSLFSGSSIDEGTRLLLENIVIPEEGVVLDIGCGYGVIGIVVARL 75 Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPP 173 +P K D++ A++ A+ NA NGV +R ++ D + VEGL F+ I SNPP Sbjct: 76 NPRLKVYMTDVNPLAVKTARFNARRNGVGDRVVVVEGDGYRPVEGLVFNAIYSNPP 131 >gi|167856203|ref|ZP_02478939.1| hypothetical protein HPS_02890 [Haemophilus parasuis 29755] gi|167852658|gb|EDS23936.1| hypothetical protein HPS_02890 [Haemophilus parasuis 29755] Length = 235 Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 30/80 (37%), Positives = 45/80 (56%), Gaps = 5/80 (6%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD--- 156 ILDLGTGTG + + L + + + +++ A A+ NA + R D LQ++ Sbjct: 38 HILDLGTGTGLIAIMLAQRTASAQITALELEENAFHQAQENAQHCPWNNRIDVLQANIMT 97 Query: 157 WFSSVEGLFDVIVSNPPYIE 176 W S+ + FD+IVSNPPY E Sbjct: 98 WKSTKK--FDLIVSNPPYFE 115 >gi|58265656|ref|XP_569984.1| S-adenosylmethionine-dependent methyltransferase [Cryptococcus neoformans var. neoformans JEC21] gi|134108951|ref|XP_776590.1| hypothetical protein CNBC0830 [Cryptococcus neoformans var. neoformans B-3501A] gi|50259270|gb|EAL21943.1| hypothetical protein CNBC0830 [Cryptococcus neoformans var. neoformans B-3501A] gi|57226216|gb|AAW42677.1| S-adenosylmethionine-dependent methyltransferase, putative [Cryptococcus neoformans var. neoformans JEC21] Length = 362 Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 61/248 (24%), Positives = 103/248 (41%), Gaps = 28/248 (11%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV--- 98 + R E + ILG F + + PRPET + + L + Sbjct: 112 VKRRSAGEPLQYILGSAGFGPINIRCQKPVLIPRPETAHIFTRLSSTILSSVSSLTSSSR 171 Query: 99 ----VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154 + +LD+ TGT + L L +P VG+D S A+ + +NA G+ R Sbjct: 172 PSAHLPVLDICTGTACIPLLLAHLNPLLTAVGIDNSPAAVSLGGANAKILGMEGRVKVRY 231 Query: 155 SDWFSSV------EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG----IDGLS 204 + F+ EG ++VSNPPYI + L V+D++ +L G +GL+ Sbjct: 232 GNVFAESTRLLGREGKVGLVVSNPPYIPFKEWEQLPKSVKDWESPAALLGDGKNYGEGLA 291 Query: 205 HYRTIADGVSRHLNKDG-----------LCSVEIGYNQKVDVVRIFESRKLFLVNAFKDY 253 Y IA+ + L ++G +VE+G Q V IF ++ ++D Sbjct: 292 FYERIAEMLPDLLLEEGEMEKKGWKGVPRVAVEVGLGQARKVEEIFRCGQINNTEVWQDQ 351 Query: 254 GGNDRVLL 261 G +R+++ Sbjct: 352 FGIERMVV 359 >gi|311739607|ref|ZP_07713442.1| transferase [Corynebacterium pseudogenitalium ATCC 33035] gi|311305423|gb|EFQ81491.1| transferase [Corynebacterium pseudogenitalium ATCC 33035] Length = 523 Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 35/103 (33%), Positives = 53/103 (51%), Gaps = 3/103 (2%) Query: 74 PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133 P P+ L V +A L V +LDLGTG+G L L + K D+ +A Sbjct: 140 PGPDHVLGVGAASLSLLQSTPVSPVGSVLDLGTGSGVQLLGQLDCAE--KITATDVHERA 197 Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYI 175 L++A++ G S++ + LQ WF V G FD +V+NPP++ Sbjct: 198 LKLAEATIAATGDSDKVELLQGSWFDPVAGRRFDRLVANPPFV 240 >gi|304385471|ref|ZP_07367816.1| methyltransferase domain protein [Pediococcus acidilactici DSM 20284] gi|304328678|gb|EFL95899.1| methyltransferase domain protein [Pediococcus acidilactici DSM 20284] Length = 201 Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 29/74 (39%), Positives = 43/74 (58%), Gaps = 1/74 (1%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 ILD+G G G + +AL K+ P + D++ +AL +A+ NA NGV+ R SD + + Sbjct: 62 ILDVGCGYGPMGIALAKQFPEARVEMTDVNERALALAERNAEANGVAARTRVYHSDAYEA 121 Query: 161 VEGL-FDVIVSNPP 173 V F +VSNPP Sbjct: 122 VAKTDFTTVVSNPP 135 >gi|210623265|ref|ZP_03293682.1| hypothetical protein CLOHIR_01632 [Clostridium hiranonis DSM 13275] gi|210153666|gb|EEA84672.1| hypothetical protein CLOHIR_01632 [Clostridium hiranonis DSM 13275] Length = 251 Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 31/99 (31%), Positives = 52/99 (52%), Gaps = 6/99 (6%) Query: 83 DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142 D+ L + R+ ++ R+ DLGTGTG + L + ++ K GV+I + E+A Sbjct: 33 DAVLLANFARV--KNGARVADLGTGTGIIPLIIYGKNNVEKIYGVEIQEEVFEMASRTVK 90 Query: 143 TNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPYIES 177 N + ++ + + +D E L FDV+ SNPPY+ S Sbjct: 91 MNEIEDKIEIVNADLKEIKEVLPQNTFDVVTSNPPYMHS 129 >gi|198274619|ref|ZP_03207151.1| hypothetical protein BACPLE_00771 [Bacteroides plebeius DSM 17135] gi|198272066|gb|EDY96335.1| hypothetical protein BACPLE_00771 [Bacteroides plebeius DSM 17135] Length = 238 Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 33/83 (39%), Positives = 46/83 (55%), Gaps = 4/83 (4%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+LD+GTG+G + L L + +P VDI +E A+ N S+R + + D Sbjct: 40 RMLDIGTGSGLIALMLAQRNPDAFVTAVDIDEAVVEQARENVARTPWSDRMEVERLDIRK 99 Query: 160 SVE---GLFDVIVSNPPY-IESV 178 + E G FD IVSNPPY +ESV Sbjct: 100 APEEWNGCFDAIVSNPPYFVESV 122 >gi|270291186|ref|ZP_06197409.1| 16S RNA methylase RsmC [Pediococcus acidilactici 7_4] gi|270280582|gb|EFA26417.1| 16S RNA methylase RsmC [Pediococcus acidilactici 7_4] Length = 201 Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 29/74 (39%), Positives = 43/74 (58%), Gaps = 1/74 (1%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 ILD+G G G + +AL K+ P + D++ +AL +A+ NA NGV+ R SD + + Sbjct: 62 ILDVGCGYGPMGIALAKQFPEARVEMTDVNERALALAERNAEANGVAARTRVYHSDAYEA 121 Query: 161 VEGL-FDVIVSNPP 173 V F +VSNPP Sbjct: 122 VAKTDFTTVVSNPP 135 >gi|170728465|ref|YP_001762491.1| rRNA (guanine-N(2)-)-methyltransferase [Shewanella woodyi ATCC 51908] gi|226712994|sp|B1KHR8|RSMC_SHEWM RecName: Full=Ribosomal RNA small subunit methyltransferase C; AltName: Full=16S rRNA m2G1207 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rsmC gi|169813812|gb|ACA88396.1| rRNA (guanine-N(2)-)-methyltransferase [Shewanella woodyi ATCC 51908] Length = 345 Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 31/85 (36%), Positives = 44/85 (51%), Gaps = 6/85 (7%) Query: 90 LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 LPR+ +R +LD G G G + ALLK P + VDI+ AL+ + N + + Sbjct: 199 LPRLSRR----VLDFGCGAGVIAAALLKAQPELEIECVDINAMALKSCELTLEANNFTAK 254 Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPY 174 SD S +G FD I+SNPP+ Sbjct: 255 --VYASDGLSQTQGHFDDIISNPPF 277 >gi|154249952|ref|YP_001410777.1| methyltransferase small [Fervidobacterium nodosum Rt17-B1] gi|154153888|gb|ABS61120.1| methyltransferase small [Fervidobacterium nodosum Rt17-B1] Length = 206 Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 3/77 (3%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LD+G G G + + L KE+P + D++ +A+E AK NA N + + D Q + + Sbjct: 66 KVLDIGCGYGVIGITLKKENPSIELFMSDVNKRAVEFAKINAKDNNI--QADIRQGNLYE 123 Query: 160 SVEG-LFDVIVSNPPYI 175 EG LFD I+SNPP + Sbjct: 124 PWEGYLFDHIISNPPIV 140 >gi|228989310|ref|ZP_04149301.1| hypothetical protein bpmyx0001_870 [Bacillus pseudomycoides DSM 12442] gi|228770388|gb|EEM18961.1| hypothetical protein bpmyx0001_870 [Bacillus pseudomycoides DSM 12442] Length = 213 Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 38/96 (39%), Positives = 54/96 (56%), Gaps = 8/96 (8%) Query: 78 TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137 + LL++ AF +P I K DV LD+G G G + L+L KE VD++ +AL +A Sbjct: 60 SRLLIE---AFQMPDI-KGDV---LDVGCGYGPIGLSLAKEFQERSVHMVDVNERALGLA 112 Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173 K NA N V E QS + +V+G + I+SNPP Sbjct: 113 KENAANNKV-ENVRIFQSSVYENVDGKYAAILSNPP 147 >gi|145636784|ref|ZP_01792450.1| 16S ribosomal RNA m2G1207 methyltransferase [Haemophilus influenzae PittHH] gi|148825706|ref|YP_001290459.1| 16S ribosomal RNA m2G1207 methyltransferase [Haemophilus influenzae PittEE] gi|229846931|ref|ZP_04467037.1| 16S ribosomal RNA m2G1207 methyltransferase [Haemophilus influenzae 7P49H1] gi|226712955|sp|A5UBC5|RSMC_HAEIE RecName: Full=Ribosomal RNA small subunit methyltransferase C; AltName: Full=16S rRNA m2G1207 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rsmC gi|145270082|gb|EDK10019.1| 16S ribosomal RNA m2G1207 methyltransferase [Haemophilus influenzae PittHH] gi|148715866|gb|ABQ98076.1| 16S ribosomal RNA m2G1207 methyltransferase [Haemophilus influenzae PittEE] gi|229810015|gb|EEP45735.1| 16S ribosomal RNA m2G1207 methyltransferase [Haemophilus influenzae 7P49H1] Length = 330 Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 31/97 (31%), Positives = 49/97 (50%), Gaps = 2/97 (2%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 +D+ L I+ + ++LDLG G G + + K P + DI ALE A+ Sbjct: 175 LDTGTELLLSTIDNKIKGKVLDLGCGAGVIGSMIKKRVPNAQITMTDIHAMALESARKTL 234 Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESV 178 N + + SD FS +EG FD+I+SNPP+ + + Sbjct: 235 SENQLQGK--VYASDVFSDIEGKFDLIISNPPFHDGI 269 >gi|229003116|ref|ZP_04160963.1| hypothetical protein bmyco0002_1050 [Bacillus mycoides Rock1-4] gi|228758131|gb|EEM07329.1| hypothetical protein bmyco0002_1050 [Bacillus mycoides Rock1-4] Length = 199 Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 36/87 (41%), Positives = 49/87 (56%), Gaps = 5/87 (5%) Query: 87 AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146 AF +P I K DV LD+G G G + L+L KE VD++ +AL +AK NA N V Sbjct: 52 AFQMPDI-KGDV---LDVGCGYGPIGLSLAKEFQERSVHMVDVNERALGLAKENAANNKV 107 Query: 147 SERFDTLQSDWFSSVEGLFDVIVSNPP 173 E QS + +V+G + I+SNPP Sbjct: 108 -ENVRIFQSSVYENVDGKYAAILSNPP 133 >gi|326937895|gb|AEA13791.1| 16S rRNA m(2)G 1207 methyltransferase [Bacillus thuringiensis serovar chinensis CT-43] Length = 199 Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 37/90 (41%), Positives = 52/90 (57%), Gaps = 11/90 (12%) Query: 87 AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV---DISCKALEIAKSNAVT 143 AF +P I K D ILD+G G G + L+L KE F+G V D++ +AL +AK NA Sbjct: 52 AFQMPDI-KGD---ILDVGCGYGPIGLSLAKE---FQGCEVHMVDVNERALGLAKENAAN 104 Query: 144 NGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173 N + E QS + +V+G + I+SNPP Sbjct: 105 NRI-ENIRIFQSSVYENVDGEYAAILSNPP 133 >gi|229015503|ref|ZP_04172501.1| hypothetical protein bcere0030_990 [Bacillus cereus AH1273] gi|229021712|ref|ZP_04178294.1| hypothetical protein bcere0029_910 [Bacillus cereus AH1272] gi|228739580|gb|EEL89994.1| hypothetical protein bcere0029_910 [Bacillus cereus AH1272] gi|228745790|gb|EEL95794.1| hypothetical protein bcere0030_990 [Bacillus cereus AH1273] Length = 213 Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 37/96 (38%), Positives = 55/96 (57%), Gaps = 8/96 (8%) Query: 78 TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137 + LL++ AF +P I K D ILD+G G G + L+L KE + VD++ +AL +A Sbjct: 60 SRLLIE---AFQMPDI-KGD---ILDVGCGYGPIGLSLAKEFQGREVHMVDVNERALGLA 112 Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173 K NA N + E QS + +V+G + I+SNPP Sbjct: 113 KENAANNRI-ENIRIFQSSVYENVDGKYAAILSNPP 147 >gi|228995491|ref|ZP_04155159.1| hypothetical protein bmyco0003_950 [Bacillus mycoides Rock3-17] gi|228764220|gb|EEM13099.1| hypothetical protein bmyco0003_950 [Bacillus mycoides Rock3-17] Length = 213 Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 36/87 (41%), Positives = 49/87 (56%), Gaps = 5/87 (5%) Query: 87 AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146 AF +P I K DV LD+G G G + L+L KE VD++ +AL +AK NA N V Sbjct: 66 AFQMPDI-KGDV---LDVGCGYGPIGLSLAKEFQERSVHMVDVNERALGLAKENAANNKV 121 Query: 147 SERFDTLQSDWFSSVEGLFDVIVSNPP 173 E QS + +V+G + I+SNPP Sbjct: 122 -ENVRIFQSSVYENVDGKYAAILSNPP 147 >gi|332160199|ref|YP_004296776.1| 16S ribosomal RNA m2G1207 methyltransferase [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|318607236|emb|CBY28734.1| ribosomal RNA small subunit methyltransferase C [Yersinia enterocolitica subsp. palearctica Y11] gi|325664429|gb|ADZ41073.1| 16S ribosomal RNA m2G1207 methyltransferase [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330860113|emb|CBX70437.1| ribosomal RNA small subunit methyltransferase C [Yersinia enterocolitica W22703] Length = 347 Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 24/87 (27%), Positives = 48/87 (55%), Gaps = 2/87 (2%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LD+G G G + L ++SP K D+S A+E +++ N + + + S+ +S Sbjct: 200 VLDVGCGAGVLACVLAQQSPKIKWTLSDVSAAAIEASRATLAANNIEAQ--VIASNVYSD 257 Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEV 187 ++G F++I+SNPP+ + + E+ Sbjct: 258 IKGRFEMIISNPPFHDGIQTSLTAAEM 284 >gi|228937403|ref|ZP_04100049.1| hypothetical protein bthur0008_880 [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228970289|ref|ZP_04130948.1| hypothetical protein bthur0003_870 [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228976859|ref|ZP_04137271.1| hypothetical protein bthur0002_870 [Bacillus thuringiensis Bt407] gi|228782829|gb|EEM30995.1| hypothetical protein bthur0002_870 [Bacillus thuringiensis Bt407] gi|228789398|gb|EEM37318.1| hypothetical protein bthur0003_870 [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228822236|gb|EEM68218.1| hypothetical protein bthur0008_880 [Bacillus thuringiensis serovar berliner ATCC 10792] Length = 213 Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 37/90 (41%), Positives = 52/90 (57%), Gaps = 11/90 (12%) Query: 87 AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV---DISCKALEIAKSNAVT 143 AF +P I K D ILD+G G G + L+L KE F+G V D++ +AL +AK NA Sbjct: 66 AFQMPDI-KGD---ILDVGCGYGPIGLSLAKE---FQGCEVHMVDVNERALGLAKENAAN 118 Query: 144 NGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173 N + E QS + +V+G + I+SNPP Sbjct: 119 NRI-ENIRIFQSSVYENVDGEYAAILSNPP 147 >gi|220927621|ref|YP_002504530.1| methyltransferase type 11 [Clostridium cellulolyticum H10] gi|219997949|gb|ACL74550.1| Methyltransferase type 11 [Clostridium cellulolyticum H10] Length = 260 Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 28/81 (34%), Positives = 48/81 (59%), Gaps = 8/81 (9%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD--- 156 ++LD+GTG+G + + L ++ K VG++I + E+A + + N +S+R + +Q D Sbjct: 53 KVLDIGTGSGIIPVLLAGKTKAAKIVGIEIQEEMAEMASRSVLMNRLSDRLEIVQGDIKL 112 Query: 157 ---WFSSVEGLFDVIVSNPPY 174 +F FDV+VSNPPY Sbjct: 113 YREYFRKSS--FDVVVSNPPY 131 >gi|332140923|ref|YP_004426661.1| peptide release factor-glutamine N5-methyltransferase(HemK) [Alteromonas macleodii str. 'Deep ecotype'] gi|327550945|gb|AEA97663.1| peptide release factor-glutamine N5-methyltransferase(HemK) [Alteromonas macleodii str. 'Deep ecotype'] Length = 162 Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 37/120 (30%), Positives = 55/120 (45%), Gaps = 9/120 (7%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L + G S + PD L Q +AI R E + I+G RDF+ + L Sbjct: 23 DAKVMLADILGKSQTYLFTWPDKTLTPSQIAEFEDAIERRKAGEPVAYIIGKRDFWTLSL 82 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIE----KRDVVRILDLGTGTGAVCLALLKESPF 121 SS T PRP+TE+LV+ + ++ + + + I DLGT L + SPF Sbjct: 83 FTSSHTLIPRPDTEVLVEHVINWATGNVSANTPNKPPLSICDLGT-----VLPFIVTSPF 137 >gi|83589437|ref|YP_429446.1| 50S ribosomal protein L11P methyltransferase [Moorella thermoacetica ATCC 39073] gi|123524952|sp|Q2RKY6|PRMA_MOOTA RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11 Mtase gi|83572351|gb|ABC18903.1| [LSU ribosomal protein L11P]-lysine N-methyltransferase [Moorella thermoacetica ATCC 39073] Length = 318 Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 40/140 (28%), Positives = 71/140 (50%), Gaps = 29/140 (20%) Query: 56 GWRDFYN-VRLT------LSSDTFEPRP-ETELLVDSALAF----------SLPRIEK-- 95 GW+ +Y+ VR+T + + + P P ET + +D +AF SL +E+ Sbjct: 113 GWQKYYHPVRVTKGLTIKPTWEEYTPSPGETVIEIDPGMAFGTGTHPTTILSLQALERVL 172 Query: 96 RDVVRILDLGTGTGAVCLALLKESPFFKGVG----VDISCKALEIAKSNAVTNGVSERFD 151 + R++D+G GTG + LA K G G +D+ A+ +A+ N NG +++ Sbjct: 173 KPGARVVDVGCGTGILALAAAK-----MGAGAVLALDLDPVAVAVARKNIARNGAADKVT 227 Query: 152 TLQSDWFSSVEGLFDVIVSN 171 +D + +EG FD++V+N Sbjct: 228 VRNNDLLAGLEGPFDLVVAN 247 >gi|329116075|ref|ZP_08244792.1| methyltransferase small domain protein [Streptococcus parauberis NCFD 2020] gi|326906480|gb|EGE53394.1| methyltransferase small domain protein [Streptococcus parauberis NCFD 2020] Length = 199 Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 28/74 (37%), Positives = 46/74 (62%), Gaps = 3/74 (4%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LDLG G G + ++L K VDI+ +A+++++ NA NGV+ QS+ + Sbjct: 60 KVLDLGCGYGPLGISLAKVQKV-DATMVDINNRAIDLSQKNAERNGVTATIK--QSNIYG 116 Query: 160 SVEGLFDVIVSNPP 173 +V+G FD I+SNPP Sbjct: 117 NVQGTFDHIISNPP 130 >gi|123440930|ref|YP_001004921.1| 16S ribosomal RNA m2G1207 methyltransferase [Yersinia enterocolitica subsp. enterocolitica 8081] gi|226723586|sp|A1JJ89|RSMC_YERE8 RecName: Full=Ribosomal RNA small subunit methyltransferase C; AltName: Full=16S rRNA m2G1207 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rsmC gi|122087891|emb|CAL10679.1| ribosomal RNA small subunit methyltransferase C [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 347 Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 24/87 (27%), Positives = 48/87 (55%), Gaps = 2/87 (2%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LD+G G G + L ++SP K D+S A+E +++ N + + + S+ +S Sbjct: 200 VLDVGCGAGVLACVLAQQSPKIKWTLSDVSAAAIEASRATLAANNIEAQ--VIASNVYSD 257 Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEV 187 ++G F++I+SNPP+ + + E+ Sbjct: 258 IKGRFEMIISNPPFHDGIQTSLTAAEM 284 >gi|207722022|ref|YP_002252460.1| hypothetical protein 1177; methyltransferase small [Ralstonia solanacearum MolK2] gi|206587196|emb|CAQ17780.1| conserved hypothetical protein 1177; methyltransferase small [Ralstonia solanacearum MolK2] Length = 406 Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 36/104 (34%), Positives = 56/104 (53%), Gaps = 4/104 (3%) Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162 D+GTGTG V A+L + + VG D +AL A+ N G+ R + +++D F E Sbjct: 233 DIGTGTG-VLAAVLAKRGVKRVVGTDQDARALVCARENLACLGLQSRVEVIEADLFP--E 289 Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206 G +IV NPP++ + + V D D R+ L G +DGL+ + Sbjct: 290 GRAPLIVCNPPWLPARPSSPIERAVYDPDSRM-LRGFLDGLAAH 332 >gi|238798253|ref|ZP_04641738.1| Ribosomal RNA small subunit methyltransferase C [Yersinia mollaretii ATCC 43969] gi|238717891|gb|EEQ09722.1| Ribosomal RNA small subunit methyltransferase C [Yersinia mollaretii ATCC 43969] Length = 347 Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 24/87 (27%), Positives = 48/87 (55%), Gaps = 2/87 (2%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LD+G G G + L ++SP K D+S A+E +++ N + + + S+ +S Sbjct: 200 VLDVGCGAGVLASVLAQQSPKIKWTLSDVSAAAIEASRATLAANNIEAQ--VIASNVYSD 257 Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEV 187 ++G F++I+SNPP+ + + E+ Sbjct: 258 IKGRFEMIISNPPFHDGIQTSLTAAEM 284 >gi|227504902|ref|ZP_03934951.1| methyltransferase small [Corynebacterium striatum ATCC 6940] gi|227198495|gb|EEI78543.1| methyltransferase small [Corynebacterium striatum ATCC 6940] Length = 553 Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 36/105 (34%), Positives = 51/105 (48%), Gaps = 5/105 (4%) Query: 74 PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133 P P L V +A L V LDLGTG+G L L + D+ +A Sbjct: 140 PGPGHVLGVGAASLSLLQSTPLTPVESALDLGTGSGVQLLGQLSTAEHV--TATDLHERA 197 Query: 134 LEIAKSNAVTNG--VSERFDTLQSDWFSSVEGL-FDVIVSNPPYI 175 LE+A++ G S++ + LQ WF V G+ FD IV+NPP++ Sbjct: 198 LELARATIAAAGTDASDKVELLQGSWFEPVAGMSFDRIVANPPFV 242 >gi|210617097|ref|ZP_03291407.1| hypothetical protein CLONEX_03629 [Clostridium nexile DSM 1787] gi|210149486|gb|EEA80495.1| hypothetical protein CLONEX_03629 [Clostridium nexile DSM 1787] Length = 246 Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 28/98 (28%), Positives = 54/98 (55%), Gaps = 6/98 (6%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 +D+ L + R+++++ LDLGTGTG + + L ++ G++I ++ ++A+ + Sbjct: 32 MDAVLLANFARVKQKECA--LDLGTGTGIIPILLTAKTEGMHFTGLEIQEESADMARRSV 89 Query: 142 VTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYI 175 N + E+ D + D + E FDVI +NPPY+ Sbjct: 90 AHNHLEEKVDIVTGDIKEAAELFGPASFDVITTNPPYM 127 >gi|298243473|ref|ZP_06967280.1| ribosomal protein L11 methyltransferase [Ktedonobacter racemifer DSM 44963] gi|297556527|gb|EFH90391.1| ribosomal protein L11 methyltransferase [Ktedonobacter racemifer DSM 44963] Length = 306 Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 43/140 (30%), Positives = 70/140 (50%), Gaps = 25/140 (17%) Query: 56 GWRDFYNV-----RLTL--SSDTFEPRPETELL-VDSALAFS----------LPRIEKRD 97 W+++Y+V RL + S + P+PE +L +D +AF L ++EKR Sbjct: 103 AWKEYYHVTLIGERLVIRPSWREYTPKPEEVVLTLDPGMAFGTGLHPTTRMCLEQLEKRV 162 Query: 98 V--VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER----FD 151 +RILD+GTG+G + +A K F +D S A E A NA N ++ER Sbjct: 163 TPGMRILDVGTGSGILAIAAAKLGAEFIH-AIDNSSVATESASENAALNELAERVKVELG 221 Query: 152 TLQSDWFSSVEGLFDVIVSN 171 L + ++G +D++V+N Sbjct: 222 ELTPESAGQMKGQYDIVVAN 241 >gi|156935522|ref|YP_001439438.1| 16S ribosomal RNA m2G1207 methyltransferase [Cronobacter sakazakii ATCC BAA-894] gi|226712952|sp|A7MGA7|RSMC_ENTS8 RecName: Full=Ribosomal RNA small subunit methyltransferase C; AltName: Full=16S rRNA m2G1207 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rsmC gi|156533776|gb|ABU78602.1| hypothetical protein ESA_03381 [Cronobacter sakazakii ATCC BAA-894] Length = 342 Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 25/75 (33%), Positives = 43/75 (57%), Gaps = 2/75 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LD+G G G + L SP + D+S A+E +++ NG + + S+ FS Sbjct: 199 KVLDVGCGAGVLAAVLASHSPKVRLTLCDVSAPAVEASRATLAANGFEG--EVVASNVFS 256 Query: 160 SVEGLFDVIVSNPPY 174 ++G FD+I+SNPP+ Sbjct: 257 EIKGRFDMIISNPPF 271 >gi|254572519|ref|XP_002493369.1| hypothetical protein [Pichia pastoris GS115] gi|238033167|emb|CAY71190.1| hypothetical protein PAS_chr3_1257 [Pichia pastoris GS115] gi|328352616|emb|CCA39014.1| hypothetical protein PP7435_Chr3-0040 [Pichia pastoris CBS 7435] Length = 292 Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 44/155 (28%), Positives = 70/155 (45%), Gaps = 11/155 (7%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110 + ILG + F +V + PR +TE + D +LD+ TG+G Sbjct: 58 LQYILGNQPFGSVNIKCRPGVLIPRNDTEEWCSELVDV----FRGSDTFSVLDMCTGSGC 113 Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG--VSERFDTLQSDWFSSVEG--LFD 166 + L L E +G DIS + +A N N + + D F + G FD Sbjct: 114 IALYLATELSNVTVLGGDISQDCISLANENIDVNKDIIKGKIKVDSMDLFQPLAGDKKFD 173 Query: 167 VIVSNPPYIESVIVDC---LGLEVRDFDPRISLDG 198 V+VSNPPYI + ++ + VR ++PR++L+G Sbjct: 174 VVVSNPPYIPTHELEKQEEVEKSVRLYEPRLALEG 208 >gi|269978101|ref|ZP_06185051.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Mobiluncus mulieris 28-1] gi|269933610|gb|EEZ90194.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Mobiluncus mulieris 28-1] Length = 330 Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 68/292 (23%), Positives = 108/292 (36%), Gaps = 58/292 (19%) Query: 21 QVIVDPDSVLDDR------QRFFLTNAIVRSLKHE-SIHRILGWRDFYNVRLTLSSDTFE 73 Q +++ + D+R Q FF A+V H + ++G F ++L F Sbjct: 37 QHVLEHPPLYDERLDAAQYQEFF---ALVGQRAHRVPLQHVMGEMYFRGLKLRARPGVFV 93 Query: 74 PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133 RPETE + ++ + + + ++LDLG G+GA+ LA+ E VDIS +A Sbjct: 94 VRPETEWVAEAGIETAQVWGAQGIPPQVLDLGCGSGALGLAVAAEVADTVLTSVDISPEA 153 Query: 134 LEIAKSNAVTNGVSER------------FDTLQSD----------WFSSVEG-------- 163 + + + NA G+ R L +D ++ EG Sbjct: 154 VALTQENADLCGIKARVILADATDLGGLISALTADSRLAPHETDRKAAATEGECQTEAAP 213 Query: 164 ---------------LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208 F VIV+NPPY+ + E P+ GG DGL R Sbjct: 214 HESENNGANETKATPKFHVIVTNPPYVIETVTQP---EAAADPPQALYGGGTDGLDIPRR 270 Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 + ++ L G +E G Q +V + KD G R L Sbjct: 271 FLENAAKLLVAGGTVVMEHGETQGEALVVAARDLGFGRAHIEKDLAGRPRFL 322 >gi|255009352|ref|ZP_05281478.1| hypothetical protein Bfra3_09443 [Bacteroides fragilis 3_1_12] gi|313147109|ref|ZP_07809302.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12] gi|313135876|gb|EFR53236.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12] Length = 237 Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 53/179 (29%), Positives = 85/179 (47%), Gaps = 22/179 (12%) Query: 96 RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155 + VRILD+GTGTG V L L + S ++I A A N + R + +Q Sbjct: 36 KSSVRILDIGTGTGLVALMLAQRST-ASITALEIDEAAAAQATENINRSPWKNRIEVIQQ 94 Query: 156 DW--FSSVEGL--FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIAD 211 D+ +SS G+ FD IVSNPPY + ++ D + + D L+ Y + Sbjct: 95 DFKHYSSKNGISKFDTIVSNPPYFNA--------SLKCSDEQRNKARHNDSLT-YEELLA 145 Query: 212 GVSRHLNKDGLCSV----EIGYNQKVDVVR--IFESRKLFLVNAFKDYGGNDRVLLFCR 264 GVS L+++G ++ ++G K + ++ SR+LF++ K G R L+ R Sbjct: 146 GVSGLLSQEGAFTIVIPMDVGEQIKTLAHKYGLYPSRQLFIIT--KPGGTPKRTLISFR 202 >gi|197121242|ref|YP_002133193.1| methyltransferase small [Anaeromyxobacter sp. K] gi|196171091|gb|ACG72064.1| methyltransferase small [Anaeromyxobacter sp. K] Length = 382 Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 27/79 (34%), Positives = 46/79 (58%), Gaps = 4/79 (5%) Query: 97 DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 D R D+GTGTG + + L + + + D+ +A+ A+ NA G++ + + +++D Sbjct: 204 DGQRAFDVGTGTGVLAMVLARAG--ARVIATDLEPRAVACARENAARLGLAGQVEVVEAD 261 Query: 157 WFSSVEGLFDVIVSNPPYI 175 F EGL DV+V NPP+I Sbjct: 262 LFP--EGLADVVVCNPPWI 278 >gi|167769486|ref|ZP_02441539.1| hypothetical protein ANACOL_00820 [Anaerotruncus colihominis DSM 17241] gi|167668454|gb|EDS12584.1| hypothetical protein ANACOL_00820 [Anaerotruncus colihominis DSM 17241] Length = 306 Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 42/139 (30%), Positives = 66/139 (47%), Gaps = 27/139 (19%) Query: 56 GWRDFY-----NVRLTL--SSDTFEPRP-ETELLVDSALAFSLPRIEKRDV--------- 98 W+ +Y RL + S +++ P P ET L +D +AF E + Sbjct: 108 AWKKYYFPTKIGERLVICPSWESYAPAPGETVLTMDPGMAFGTGTHETTRLCIQLLEEAV 167 Query: 99 ---VRILDLGTGTGAVCLALLKESPFF---KGVGVDISCKALEIAKSNAVTNGVSERFDT 152 + +LD+GTG+G + +A L F VGVDI A+ +A+ NA NGV R Sbjct: 168 TPGMDLLDIGTGSGILAIAAL----LFGARAAVGVDIDEVAVRVARENAKANGVGGRARF 223 Query: 153 LQSDWFSSVEGLFDVIVSN 171 + D + V+G+F V+ +N Sbjct: 224 IAGDLAAKVDGVFPVVTAN 242 >gi|228475259|ref|ZP_04059984.1| methyltransferase small domain protein [Staphylococcus hominis SK119] gi|314937154|ref|ZP_07844501.1| YbxB protein [Staphylococcus hominis subsp. hominis C80] gi|228270724|gb|EEK12133.1| methyltransferase small domain protein [Staphylococcus hominis SK119] gi|313655773|gb|EFS19518.1| YbxB protein [Staphylococcus hominis subsp. hominis C80] Length = 202 Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 34/97 (35%), Positives = 52/97 (53%), Gaps = 6/97 (6%) Query: 78 TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137 ++LLV + L P KR I+D+G G G + L + K SP + VD++ +AL +A Sbjct: 45 SDLLVQTFLNEHPPGPSKR----IIDVGCGYGPIGLMIAKVSPHHQMTMVDVNHRALHLA 100 Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPP 173 + N N + T +SD S VE FD +++NPP Sbjct: 101 EKNKKQNQIDNVIIT-ESDGLSQVENEYFDFVLTNPP 136 >gi|255718321|ref|XP_002555441.1| KLTH0G09416p [Lachancea thermotolerans] gi|238936825|emb|CAR25004.1| KLTH0G09416p [Lachancea thermotolerans] Length = 293 Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 50/157 (31%), Positives = 71/157 (45%), Gaps = 9/157 (5%) Query: 47 KHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGT 106 +H + +LG + F + +T PR ETE S LA LPR D I+DL T Sbjct: 58 RHYPLQYLLGSQPFGPLDVTCQPGVLIPRWETEEWTVS-LAEKLPRDMAFD---IMDLCT 113 Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEG 163 GTG + L L + P VD S A ++A N+ T V + D L+ V Sbjct: 114 GTGCIPLLLKQMCPKCSVFAVDRSPLAYKLATRNSNTLQVPLKIIKKDILERS-SEIVPR 172 Query: 164 LFDVIVSNPPYI-ESVIVDCLGLEVRDFDPRISLDGG 199 D+I NPPYI + V+ F+P+++L G Sbjct: 173 TVDLITCNPPYIPRTTFARETARSVKLFEPKLALLGN 209 >gi|332304707|ref|YP_004432558.1| methyltransferase small [Glaciecola agarilytica 4H-3-7+YE-5] gi|332172036|gb|AEE21290.1| methyltransferase small [Glaciecola agarilytica 4H-3-7+YE-5] Length = 248 Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 31/86 (36%), Positives = 49/86 (56%), Gaps = 5/86 (5%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFD----TLQ 154 + LD+GTG+G + + L ++SP + G+DI A+ AK N + SE+ D +LQ Sbjct: 46 QFLDIGTGSGLLAIMLAQKSPAHTCITGIDIDSDAIGQAKRNMANSPWSEKLDAQQTSLQ 105 Query: 155 SDWFSSVEGLFDVIVSNPPYIESVIV 180 S V+ + +I+SNPPY S I+ Sbjct: 106 SFHKREVDQKYRLIISNPPYFNSPIL 131 >gi|304415329|ref|ZP_07396010.1| 16S rRNA m2G1207 methylase [Candidatus Regiella insecticola LSR1] gi|304282816|gb|EFL91298.1| 16S rRNA m2G1207 methylase [Candidatus Regiella insecticola LSR1] Length = 250 Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 24/81 (29%), Positives = 46/81 (56%), Gaps = 2/81 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LD+ GTG + L SP K D+S ALE +++ N + + + S+ +S Sbjct: 102 KVLDIACGTGVLACVLAHHSPQIKLTLSDVSAAALEASRATLAINNIDA--EVIASNLYS 159 Query: 160 SVEGLFDVIVSNPPYIESVIV 180 ++G FD+I++NPP+ + + + Sbjct: 160 DIKGRFDLIMANPPFHDGLAI 180 >gi|238782738|ref|ZP_04626768.1| Ribosomal RNA small subunit methyltransferase C [Yersinia bercovieri ATCC 43970] gi|238716398|gb|EEQ08380.1| Ribosomal RNA small subunit methyltransferase C [Yersinia bercovieri ATCC 43970] Length = 347 Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 24/87 (27%), Positives = 48/87 (55%), Gaps = 2/87 (2%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LD+G G G + L ++SP K D+S A+E +++ N + + + S+ +S Sbjct: 200 VLDVGCGAGVLASVLAQQSPKIKWTLSDVSAAAIEASRATLAANNIDAQ--VIASNVYSD 257 Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEV 187 ++G F++I+SNPP+ + + E+ Sbjct: 258 IKGRFEMIISNPPFHDGIQTSLTAAEM 284 >gi|325954701|ref|YP_004238361.1| tRNA (adenine-N(6)-)-methyltransferase [Weeksella virosa DSM 16922] gi|323437319|gb|ADX67783.1| tRNA (adenine-N(6)-)-methyltransferase [Weeksella virosa DSM 16922] Length = 237 Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 30/81 (37%), Positives = 44/81 (54%), Gaps = 1/81 (1%) Query: 97 DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 D +ILD+GTGTG + L L + +P V+I A + A+ N + ER + +D Sbjct: 39 DAKKILDVGTGTGLIALMLAQRNPTAMIDAVEIDASAYKQAERNVQESKFHERVSVIFND 98 Query: 157 WFS-SVEGLFDVIVSNPPYIE 176 + + S +D IVSNPPY E Sbjct: 99 FSAFSPNQKYDCIVSNPPYFE 119 >gi|256273272|gb|EEU08213.1| Mtq1p [Saccharomyces cerevisiae JAY291] Length = 314 Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 44/168 (26%), Positives = 77/168 (45%), Gaps = 7/168 (4%) Query: 41 AIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL-AFSLPRIEKRDV- 98 A ++ KH + IL + F + + PR ETE V + + A + + + + Sbjct: 52 ACLQRYKHVPLQYILRSQPFGALDIVCKPGVLIPRWETEEWVMAIIRALNNSMLSRHTIP 111 Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE----RFDTLQ 154 + I D TGTG + LAL +D+S +A+++ K N + N VS + + L Sbjct: 112 LHICDTFTGTGCIALALSHGIANCTFTAIDVSTRAIKLVKENMLKNKVSGGKLVQHNILS 171 Query: 155 SDWFSSVEGLFDVIVSNPPYIESVIVD-CLGLEVRDFDPRISLDGGID 201 S D++ NPPYI + + V+ F+PR++L G ++ Sbjct: 172 SKASDEYPSHIDILTGNPPYIRKRDFNRNVKTSVKLFEPRLALVGELE 219 >gi|51594923|ref|YP_069114.1| 16S ribosomal RNA m2G1207 methyltransferase [Yersinia pseudotuberculosis IP 32953] gi|186893923|ref|YP_001871035.1| 16S ribosomal RNA m2G1207 methyltransferase [Yersinia pseudotuberculosis PB1/+] gi|81640466|sp|Q66EW9|RSMC_YERPS RecName: Full=Ribosomal RNA small subunit methyltransferase C; AltName: Full=16S rRNA m2G1207 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rsmC gi|226725328|sp|B2K3H9|RSMC_YERPB RecName: Full=Ribosomal RNA small subunit methyltransferase C; AltName: Full=16S rRNA m2G1207 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rsmC gi|51588205|emb|CAH19812.1| ribosomal RNA small subunit methyltransferase C [Yersinia pseudotuberculosis IP 32953] gi|186696949|gb|ACC87578.1| Methyltransferase small domain protein [Yersinia pseudotuberculosis PB1/+] Length = 347 Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 24/87 (27%), Positives = 48/87 (55%), Gaps = 2/87 (2%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LD+G G G + L ++SP K D+S A+E +++ N + + + S+ +S Sbjct: 200 VLDVGCGAGVLASVLAQQSPKIKWTLSDVSAAAIEASRATLAVNNIEAQ--VIASNVYSD 257 Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEV 187 ++G F++I+SNPP+ + + E+ Sbjct: 258 IKGRFEMIISNPPFHDGIQTSLTAAEM 284 >gi|256384417|gb|ACU78987.1| methyltransferase [Mycoplasma mycoides subsp. capri str. GM12] gi|256385249|gb|ACU79818.1| methyltransferase [Mycoplasma mycoides subsp. capri str. GM12] gi|296455741|gb|ADH21976.1| methyltransferase [synthetic Mycoplasma mycoides JCVI-syn1.0] Length = 240 Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 30/80 (37%), Positives = 46/80 (57%), Gaps = 4/80 (5%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW-- 157 +I D GT + L L K + K +GV+I KA+EIAK N NG+ E+ + + +D Sbjct: 43 KICDFGTNNAVIPLILSKYTKA-KIIGVEIQNKAVEIAKQNIKLNGLEEQIEIIHADIKE 101 Query: 158 FSSVEGL-FDVIVSNPPYIE 176 FS + FD++V NPP+ + Sbjct: 102 FSKLHNQEFDLVVCNPPFFK 121 >gi|224024952|ref|ZP_03643318.1| hypothetical protein BACCOPRO_01683 [Bacteroides coprophilus DSM 18228] gi|224018188|gb|EEF76186.1| hypothetical protein BACCOPRO_01683 [Bacteroides coprophilus DSM 18228] Length = 237 Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 43/152 (28%), Positives = 74/152 (48%), Gaps = 17/152 (11%) Query: 100 RILDLGTGTGAVCLALLK--ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD- 156 R+LDLGTGTG + L + ++P G+D+ A+E A N + ++R + D Sbjct: 40 RVLDLGTGTGLIALMAAQRCQAPV---CGIDVDEAAVEQALENVAASPWADRIRIWKQDV 96 Query: 157 --WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214 ++ +G+FD IVSNPPY ++ C D + + DGL + + + V Sbjct: 97 REMWAETDGVFDAIVSNPPYFTEKVL-CP-------DRQRNAARHTDGLD-FDELLEAVC 147 Query: 215 RHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246 R L + G+ SV + + D + + +L+L Sbjct: 148 RLLTERGVFSVVLPSDAGRDFIGLALRHRLYL 179 >gi|227495667|ref|ZP_03925983.1| conserved hypothetical protein [Actinomyces coleocanis DSM 15436] gi|226830899|gb|EEH63282.1| conserved hypothetical protein [Actinomyces coleocanis DSM 15436] Length = 509 Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 57/167 (34%), Positives = 81/167 (48%), Gaps = 22/167 (13%) Query: 68 SSDTFEPRPETELLVDSALAFSLPRIEKRDVV-RILDLGTGTGAVCL-ALLKESPFFKGV 125 SS T +P + +L +L + RD V R+LDLGTG G + + A L V Sbjct: 137 SSVTGKPVEKDHVLGIGGATRTLLQATPRDQVGRVLDLGTGCGIIGMYAALHADEV---V 193 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG- 184 DIS +A+ +A NA N V + +Q F ++G FD+I+SNPP++ + D L Sbjct: 194 ATDISARAVMLADFNAHLNEV--KMQVVQGSLFEPIKGDFDLILSNPPFV--ITPDSLRE 249 Query: 185 ---LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228 LE R DGG G S + G + HL + GL SV +G Sbjct: 250 TGILEYR--------DGGQTGDSLVAQVVAGAAAHLREGGL-SVMLG 287 >gi|307296819|ref|ZP_07576637.1| methyltransferase small [Sphingobium chlorophenolicum L-1] gi|306877732|gb|EFN08958.1| methyltransferase small [Sphingobium chlorophenolicum L-1] Length = 325 Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 30/76 (39%), Positives = 40/76 (52%), Gaps = 2/76 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 RI DLGTG G + L + P + + D++ AL A+ NA G+ R D Sbjct: 150 RIADLGTGAGVGAVTLARLRPDARILMTDVNPAALRFARINAGLAGIEAR--QALGDRLD 207 Query: 160 SVEGLFDVIVSNPPYI 175 EG FD+IV+NPPYI Sbjct: 208 PREGRFDLIVANPPYI 223 >gi|238752630|ref|ZP_04614102.1| Ribosomal RNA small subunit methyltransferase C [Yersinia rohdei ATCC 43380] gi|238709144|gb|EEQ01390.1| Ribosomal RNA small subunit methyltransferase C [Yersinia rohdei ATCC 43380] Length = 347 Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 25/87 (28%), Positives = 47/87 (54%), Gaps = 2/87 (2%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LD+G G G + L ++SP K D+S ALE +++ N + + S+ +S Sbjct: 200 VLDVGCGAGVLASVLAQQSPKIKWTLCDVSAAALEASRATLAANNIEA--PVIASNVYSD 257 Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEV 187 ++G F++I+SNPP+ + + E+ Sbjct: 258 IKGRFEMIISNPPFHDGMQTSLTAAEM 284 >gi|224368758|ref|YP_002602919.1| SAM-dependent methyltransferase [Desulfobacterium autotrophicum HRM2] gi|223691474|gb|ACN14757.1| SAM-dependent methyltransferase [Desulfobacterium autotrophicum HRM2] Length = 218 Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 4/82 (4%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 RI DLGTG G + L L ++ P G++I ++IA N N ++++ L SD S Sbjct: 28 RIADLGTGCGIIPLLLSRKHPETHITGIEIQGALVDIANKNIQKNHLTDQVTILLSDIRS 87 Query: 160 SVE----GLFDVIVSNPPYIES 177 V G D++V+NPPYI+ Sbjct: 88 LVPADLGGPVDLVVTNPPYIKQ 109 >gi|238794780|ref|ZP_04638382.1| Ribosomal RNA small subunit methyltransferase C [Yersinia intermedia ATCC 29909] gi|238725860|gb|EEQ17412.1| Ribosomal RNA small subunit methyltransferase C [Yersinia intermedia ATCC 29909] Length = 347 Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 24/87 (27%), Positives = 48/87 (55%), Gaps = 2/87 (2%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LD+G G G + L ++SP K D+S A+E +++ N + + + S+ +S Sbjct: 200 VLDVGCGAGVLASVLAQQSPKIKWTLSDVSAAAIEASRATLAANNIDAQ--VIASNVYSD 257 Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEV 187 ++G F++I+SNPP+ + + E+ Sbjct: 258 IKGRFEMIISNPPFHDGIQTSLTAAEL 284 >gi|22127624|ref|NP_671047.1| 16S ribosomal RNA m2G1207 methyltransferase [Yersinia pestis KIM 10] gi|45443486|ref|NP_995025.1| 16S ribosomal RNA m2G1207 methyltransferase [Yersinia pestis biovar Microtus str. 91001] gi|108809848|ref|YP_653764.1| 16S ribosomal RNA m2G1207 methyltransferase [Yersinia pestis Antiqua] gi|108810463|ref|YP_646230.1| 16S ribosomal RNA m2G1207 methyltransferase [Yersinia pestis Nepal516] gi|145600460|ref|YP_001164536.1| 16S ribosomal RNA m2G1207 methyltransferase [Yersinia pestis Pestoides F] gi|150260533|ref|ZP_01917261.1| ribosomal RNA small subunit methyltransferase C [Yersinia pestis CA88-4125] gi|153946974|ref|YP_001402462.1| 16S ribosomal RNA m2G1207 methyltransferase [Yersinia pseudotuberculosis IP 31758] gi|162419874|ref|YP_001605415.1| 16S ribosomal RNA m2G1207 methyltransferase [Yersinia pestis Angola] gi|165927283|ref|ZP_02223115.1| methyltransferase family protein [Yersinia pestis biovar Orientalis str. F1991016] gi|165936497|ref|ZP_02225065.1| methyltransferase family protein [Yersinia pestis biovar Orientalis str. IP275] gi|166009029|ref|ZP_02229927.1| methyltransferase family protein [Yersinia pestis biovar Antiqua str. E1979001] gi|166211827|ref|ZP_02237862.1| methyltransferase family protein [Yersinia pestis biovar Antiqua str. B42003004] gi|167400573|ref|ZP_02306082.1| methyltransferase family protein [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167419039|ref|ZP_02310792.1| methyltransferase family protein [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167426101|ref|ZP_02317854.1| methyltransferase family protein [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167469141|ref|ZP_02333845.1| methyltransferase family protein [Yersinia pestis FV-1] gi|170025851|ref|YP_001722356.1| 16S ribosomal RNA m2G1207 methyltransferase [Yersinia pseudotuberculosis YPIII] gi|218927628|ref|YP_002345503.1| 16S ribosomal RNA m2G1207 methyltransferase [Yersinia pestis CO92] gi|229836992|ref|ZP_04457157.1| 16S rRNA m2G1207 methylase [Yersinia pestis Pestoides A] gi|229840310|ref|ZP_04460469.1| 16S rRNA m2G1207 methylase [Yersinia pestis biovar Orientalis str. PEXU2] gi|229842389|ref|ZP_04462544.1| 16S rRNA m2G1207 methylase [Yersinia pestis biovar Orientalis str. India 195] gi|229900651|ref|ZP_04515775.1| 16S rRNA m2G1207 methylase [Yersinia pestis Nepal516] gi|270487989|ref|ZP_06205063.1| methyltransferase small domain N-terminal [Yersinia pestis KIM D27] gi|294502525|ref|YP_003566587.1| 16S ribosomal RNA m2G1207 methyltransferase [Yersinia pestis Z176003] gi|122980358|sp|Q1CN00|RSMC_YERPN RecName: Full=Ribosomal RNA small subunit methyltransferase C; AltName: Full=16S rRNA m2G1207 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rsmC gi|123245407|sp|Q1C153|RSMC_YERPA RecName: Full=Ribosomal RNA small subunit methyltransferase C; AltName: Full=16S rRNA m2G1207 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rsmC gi|123776538|sp|Q7CG56|RSMC_YERPE RecName: Full=Ribosomal RNA small subunit methyltransferase C; AltName: Full=16S rRNA m2G1207 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rsmC gi|226725327|sp|A7FMI4|RSMC_YERP3 RecName: Full=Ribosomal RNA small subunit methyltransferase C; AltName: Full=16S rRNA m2G1207 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rsmC gi|226725329|sp|A9R058|RSMC_YERPG RecName: Full=Ribosomal RNA small subunit methyltransferase C; AltName: Full=16S rRNA m2G1207 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rsmC gi|226725330|sp|A4TQK1|RSMC_YERPP RecName: Full=Ribosomal RNA small subunit methyltransferase C; AltName: Full=16S rRNA m2G1207 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rsmC gi|226725331|sp|B1JL46|RSMC_YERPY RecName: Full=Ribosomal RNA small subunit methyltransferase C; AltName: Full=16S rRNA m2G1207 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rsmC gi|21960735|gb|AAM87298.1|AE013978_10 putative enzyme [Yersinia pestis KIM 10] gi|45438355|gb|AAS63902.1| ribosomal RNA small subunit methyltransferase C [Yersinia pestis biovar Microtus str. 91001] gi|108774111|gb|ABG16630.1| 16S rRNA m(2)G 1207 methyltransferase [Yersinia pestis Nepal516] gi|108781761|gb|ABG15819.1| 16S rRNA m(2)G 1207 methyltransferase [Yersinia pestis Antiqua] gi|115346239|emb|CAL19108.1| ribosomal RNA small subunit methyltransferase C [Yersinia pestis CO92] gi|145212156|gb|ABP41563.1| 16S rRNA m(2)G 1207 methyltransferase [Yersinia pestis Pestoides F] gi|149289941|gb|EDM40018.1| ribosomal RNA small subunit methyltransferase C [Yersinia pestis CA88-4125] gi|152958469|gb|ABS45930.1| methyltransferase family protein [Yersinia pseudotuberculosis IP 31758] gi|162352689|gb|ABX86637.1| methyltransferase family protein [Yersinia pestis Angola] gi|165915613|gb|EDR34222.1| methyltransferase family protein [Yersinia pestis biovar Orientalis str. IP275] gi|165920745|gb|EDR37993.1| methyltransferase family protein [Yersinia pestis biovar Orientalis str. F1991016] gi|165992368|gb|EDR44669.1| methyltransferase family protein [Yersinia pestis biovar Antiqua str. E1979001] gi|166206573|gb|EDR51053.1| methyltransferase family protein [Yersinia pestis biovar Antiqua str. B42003004] gi|166963033|gb|EDR59054.1| methyltransferase family protein [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167049941|gb|EDR61349.1| methyltransferase family protein [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167055024|gb|EDR64824.1| methyltransferase family protein [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169752385|gb|ACA69903.1| rRNA (guanine-N(2)-)-methyltransferase [Yersinia pseudotuberculosis YPIII] gi|229681990|gb|EEO78082.1| 16S rRNA m2G1207 methylase [Yersinia pestis Nepal516] gi|229690699|gb|EEO82753.1| 16S rRNA m2G1207 methylase [Yersinia pestis biovar Orientalis str. India 195] gi|229696676|gb|EEO86723.1| 16S rRNA m2G1207 methylase [Yersinia pestis biovar Orientalis str. PEXU2] gi|229705935|gb|EEO91944.1| 16S rRNA m2G1207 methylase [Yersinia pestis Pestoides A] gi|262360555|gb|ACY57276.1| 16S ribosomal RNA m2G1207 methyltransferase [Yersinia pestis D106004] gi|270336493|gb|EFA47270.1| methyltransferase small domain N-terminal [Yersinia pestis KIM D27] gi|294352984|gb|ADE63325.1| 16S ribosomal RNA m2G1207 methyltransferase [Yersinia pestis Z176003] Length = 347 Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 24/87 (27%), Positives = 48/87 (55%), Gaps = 2/87 (2%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LD+G G G + L ++SP K D+S A+E +++ N + + + S+ +S Sbjct: 200 VLDVGCGAGVLASVLAQQSPKIKWTLSDVSAAAIEASRATLAVNNIEAQ--VIASNVYSD 257 Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEV 187 ++G F++I+SNPP+ + + E+ Sbjct: 258 IKGRFEMIISNPPFHDGIQTSLTAAEM 284 >gi|154151408|ref|YP_001405026.1| putative methylase [Candidatus Methanoregula boonei 6A8] gi|153999960|gb|ABS56383.1| putative methylase [Methanoregula boonei 6A8] Length = 185 Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 51/187 (27%), Positives = 86/187 (45%), Gaps = 30/187 (16%) Query: 69 SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128 + ++P +T LL+++A + E R R+L++GTG+G + AL+++ + V D Sbjct: 6 TQVYQPEADTFLLLEAA------QEEVRPGDRVLEIGTGSGRIAAALVRDH---EVVATD 56 Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYI----ESVIVDCLG 184 I+ A+ A+ E D ++ D FS + G F++I+ NPPY+ E I D L Sbjct: 57 INPHAVFCARK--------EGLDVIRCDLFSGIRGRFNLILFNPPYLPTRPEERIDDWL- 107 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 +LDGG G + A V L+ G + I + V+ SR Sbjct: 108 --------EFALDGGATGRATIDRFASSVGDVLSPGGRLLLLISTLTGLPEVQELFSRYG 159 Query: 245 FLVNAFK 251 F V+ + Sbjct: 160 FAVSVVR 166 >gi|67922523|ref|ZP_00516031.1| similar to 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1 4-benzoquinol methylase [Crocosphaera watsonii WH 8501] gi|67855607|gb|EAM50858.1| similar to 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1 4-benzoquinol methylase [Crocosphaera watsonii WH 8501] Length = 401 Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 35/91 (38%), Positives = 49/91 (53%), Gaps = 6/91 (6%) Query: 84 SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143 +A F R +R+ +RILD G GTG L+ +P + VGVDIS KALEIA+ + Sbjct: 41 AAYNFCTGRKPERENIRILDAGCGTGVGTEYLILLNPHAEIVGVDISEKALEIAQKRSQQ 100 Query: 144 NGVSER------FDTLQSDWFSSVEGLFDVI 168 +GV+ F L + +EG FD+I Sbjct: 101 SGVATNHNHPISFHHLPLENADQIEGEFDLI 131 >gi|297572232|ref|YP_003698006.1| methyltransferase small [Arcanobacterium haemolyticum DSM 20595] gi|296932579|gb|ADH93387.1| methyltransferase small [Arcanobacterium haemolyticum DSM 20595] Length = 496 Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 45/125 (36%), Positives = 62/125 (49%), Gaps = 16/125 (12%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LDLGTG G A++ DIS +AL+ A+ NA NGV+ +T F Sbjct: 154 VLDLGTGCG--IHAIIAAKAGAHATATDISQRALDYAQFNARLNGVT--INTRIGSLFEP 209 Query: 161 VEG-LFDVIVSNPPYI--ESVIVDCLG-LEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216 V G F V+VSNPP++ S + D +G LE R DGG G + T+ G+ H Sbjct: 210 VAGETFSVVVSNPPFVITPSDVRDSVGTLEYR--------DGGAPGDTLAATVVAGLDAH 261 Query: 217 LNKDG 221 + DG Sbjct: 262 VAPDG 266 >gi|257125089|ref|YP_003163203.1| O-methyltransferase-like protein [Leptotrichia buccalis C-1013-b] gi|257049028|gb|ACV38212.1| O-methyltransferase-like protein [Leptotrichia buccalis C-1013-b] Length = 220 Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 1/74 (1%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 IL++G G G + L L K F K V+I EI K N N + E+ ++ D + Sbjct: 50 ILEIGAGQGIITLLLSKIEIFEKIFAVEIQKDIFEILKKNIKINNLEEKITSINED-IKT 108 Query: 161 VEGLFDVIVSNPPY 174 ++G +D I SNPPY Sbjct: 109 IKGEYDFIFSNPPY 122 >gi|30018371|ref|NP_830002.1| 16S rRNA m(2)G 1207 methyltransferase [Bacillus cereus ATCC 14579] gi|29893911|gb|AAP07203.1| 16S rRNA m(2)G 1207 methyltransferase [Bacillus cereus ATCC 14579] Length = 199 Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 36/99 (36%), Positives = 56/99 (56%), Gaps = 14/99 (14%) Query: 78 TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV---DISCKAL 134 + LL++ AF +P I+ ILD+G G G + L+L KE F+G V D++ +AL Sbjct: 46 SRLLIE---AFQMPDIKGN----ILDVGCGYGPIGLSLAKE---FQGREVHMVDVNERAL 95 Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173 +AK NA N + + QS + +V+G + I+SNPP Sbjct: 96 GLAKENAANNKI-KNIRIFQSSVYENVDGKYAAILSNPP 133 >gi|300715160|ref|YP_003739963.1| ribosomal RNA small subunit methyltransferase C [Erwinia billingiae Eb661] gi|299060996|emb|CAX58103.1| Ribosomal RNA small subunit methyltransferase C [Erwinia billingiae Eb661] Length = 344 Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 42/159 (26%), Positives = 72/159 (45%), Gaps = 30/159 (18%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LD+G G G + L SP + D++ A+E +K+ N + + S+ +S Sbjct: 199 KVLDMGCGAGVLSAMLASFSPKVRLFMTDVNAAAIEASKATLAANDLEG--EVFASNVYS 256 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 V G +D+I+SNPP+ + + + SLD +T+ G +HLN Sbjct: 257 DVNGRYDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVKHLNM 295 Query: 220 DG----LCSVEIGYNQKVDVVRIFESRKLFLVNA-FKDY 253 G + + + Y Q +D F S ++ L N FK Y Sbjct: 296 GGELRIVANAFLPYPQILD--ETFGSHEVLLQNGRFKVY 332 >gi|229125618|ref|ZP_04254650.1| hypothetical protein bcere0015_880 [Bacillus cereus BDRD-Cer4] gi|228657810|gb|EEL13616.1| hypothetical protein bcere0015_880 [Bacillus cereus BDRD-Cer4] Length = 213 Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 34/96 (35%), Positives = 54/96 (56%), Gaps = 8/96 (8%) Query: 78 TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137 + LL++ AF +P I+ ILD+G G G + L+L KE + VD++ +AL +A Sbjct: 60 SRLLIE---AFQMPDIKGN----ILDVGCGYGPIGLSLAKEFQGREVHMVDVNERALGLA 112 Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173 K NA N + + QS + +V+G + I+SNPP Sbjct: 113 KENAANNKI-KNIRIFQSSVYENVDGKYAAILSNPP 147 >gi|171693673|ref|XP_001911761.1| hypothetical protein [Podospora anserina S mat+] gi|170946785|emb|CAP73589.1| unnamed protein product [Podospora anserina S mat+] Length = 336 Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 50/184 (27%), Positives = 82/184 (44%), Gaps = 27/184 (14%) Query: 34 QRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVD---SALAFSL 90 ++ + A ++ K + ILG + F + + PRPETE ++ + L FS Sbjct: 53 RKLGIWQACLKREKGIPLQYILGNQPFGPLDILCKPGVLIPRPETESIITHLTTLLPFS- 111 Query: 91 PRIEKRDVVRILDLGTGTGAVCLALLKESPFF-KGVGVDISCKALEIAKSNAVTN----- 144 ++ILDL TGTG + L + P + +GVDIS A+ +++ N N Sbjct: 112 -----SSPLKILDLCTGTGCIPLLIASLLPSTSQTLGVDISPLAISLSRQNLSHNISLSH 166 Query: 145 ---GVSERFDTLQSDWFSSV--------EGLFDVIVSNPPYIESVIVD-CLGLEVRDFDP 192 S+ +SD FS G D++ SNPPYI + VR ++P Sbjct: 167 LPLSASKSITFTKSDIFSPSFLSSLPFSPGELDILTSNPPYISPAGFNKNTERSVRFYEP 226 Query: 193 RISL 196 +++L Sbjct: 227 KLAL 230 >gi|6324266|ref|NP_014336.1| Mtq1p [Saccharomyces cerevisiae S288c] gi|1730740|sp|P53944|MTQ1_YEAST RecName: Full=Mitochondrial N(5)-glutamine methyltransferase MTQ1 gi|994824|gb|AAA99648.1| Ynl2420p [Saccharomyces cerevisiae] gi|1301939|emb|CAA95936.1| unnamed protein product [Saccharomyces cerevisiae] gi|51012621|gb|AAT92604.1| YNL063W [Saccharomyces cerevisiae] gi|190409052|gb|EDV12317.1| hypothetical protein SCRG_03198 [Saccharomyces cerevisiae RM11-1a] gi|259149297|emb|CAY82539.1| Mtq1p [Saccharomyces cerevisiae EC1118] gi|285814589|tpg|DAA10483.1| TPA: Mtq1p [Saccharomyces cerevisiae S288c] gi|323303250|gb|EGA57048.1| Mtq1p [Saccharomyces cerevisiae FostersB] Length = 314 Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 44/168 (26%), Positives = 77/168 (45%), Gaps = 7/168 (4%) Query: 41 AIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL-AFSLPRIEKRDV- 98 A ++ KH + IL + F + + PR ETE V + + A + + + + Sbjct: 52 ACLQRYKHVPLQYILRSQPFGALDIVCKPGVLIPRWETEEWVMAIIRALNNSMLSRHTIP 111 Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE----RFDTLQ 154 + I D TGTG + LAL +D+S +A+++ K N + N VS + + L Sbjct: 112 LHICDTFTGTGCIALALSHGIANCTFTAIDVSTRAIKLVKENMLKNKVSGGKLVQHNILS 171 Query: 155 SDWFSSVEGLFDVIVSNPPYIESVIVDC-LGLEVRDFDPRISLDGGID 201 S D++ NPPYI + + V+ F+PR++L G ++ Sbjct: 172 SKASDEYPSHIDILTGNPPYIRKRDFNRDVKTSVKLFEPRLALVGELE 219 >gi|209516570|ref|ZP_03265424.1| methyltransferase small [Burkholderia sp. H160] gi|209503011|gb|EEA03013.1| methyltransferase small [Burkholderia sp. H160] Length = 374 Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 37/106 (34%), Positives = 56/106 (52%), Gaps = 4/106 (3%) Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162 D+GTGTG V ALL + K V D +AL A+ N G E+ + +Q+D F + Sbjct: 201 DIGTGTG-VLAALLAKRGVGKIVATDQDSRALACARENLARLGYGEQVEIVQADLFP--D 257 Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208 G ++V NPP++ + L V D D R+ L G ++GL+ + T Sbjct: 258 GRAPLVVCNPPWVPARPASPLEYAVYDPDSRMLL-GFLNGLADHLT 302 >gi|157368894|ref|YP_001476883.1| 16S ribosomal RNA m2G1207 methyltransferase [Serratia proteamaculans 568] gi|226712980|sp|A8G9G5|RSMC_SERP5 RecName: Full=Ribosomal RNA small subunit methyltransferase C; AltName: Full=16S rRNA m2G1207 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rsmC gi|157320658|gb|ABV39755.1| rRNA (guanine-N(2)-)-methyltransferase [Serratia proteamaculans 568] Length = 347 Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 27/85 (31%), Positives = 48/85 (56%), Gaps = 2/85 (2%) Query: 90 LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 L ++K ++LD+G G G + L K SP K D++ A+E +++ NG+ Sbjct: 189 LSTLDKHMKGKVLDVGCGAGVMASVLSKLSPKMKLTLSDVNAAAIESSRATLAANGIEG- 247 Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPY 174 + + S+ +S + G FD+I+SNPP+ Sbjct: 248 -EVIVSNVYSDITGRFDLIISNPPF 271 >gi|188501450|gb|ACD54583.1| HemK-like protein methyltransferase-like protein [Adineta vaga] Length = 322 Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 30/78 (38%), Positives = 43/78 (55%), Gaps = 2/78 (2%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 V R++D+G G G + L K P + +GVDI+ AL + NA V+ SD Sbjct: 143 VRRVVDIGCGAGPGAIMLAKTYPNAEILGVDINDTALRLTSINARLANVN--VIACHSDL 200 Query: 158 FSSVEGLFDVIVSNPPYI 175 V+G FD+I+SNPPY+ Sbjct: 201 LKDVQGDFDMIISNPPYL 218 >gi|151944471|gb|EDN62749.1| methyltransferase [Saccharomyces cerevisiae YJM789] Length = 314 Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 44/168 (26%), Positives = 77/168 (45%), Gaps = 7/168 (4%) Query: 41 AIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL-AFSLPRIEKRDV- 98 A ++ KH + IL + F + + PR ETE V + + A + + + + Sbjct: 52 ACLQRYKHVPLQYILRSQPFGALDIVCKPGVLIPRWETEEWVMAIIRALNNSMLSRHTIP 111 Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE----RFDTLQ 154 + I D TGTG + LAL +D+S +A+++ K N + N VS + + L Sbjct: 112 LHICDTFTGTGCIALALSHGIANCTFTAIDVSTRAIKLVKENMLKNKVSGGKLVQHNILS 171 Query: 155 SDWFSSVEGLFDVIVSNPPYIESVIVDC-LGLEVRDFDPRISLDGGID 201 S D++ NPPYI + + V+ F+PR++L G ++ Sbjct: 172 SKASDEYPSHIDILTGNPPYIRKRDFNRDVKTSVKLFEPRLALVGELE 219 >gi|48477307|ref|YP_023013.1| methyltransferase [Picrophilus torridus DSM 9790] gi|48429955|gb|AAT42820.1| methyltransferase [Picrophilus torridus DSM 9790] Length = 182 Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 49/189 (25%), Positives = 82/189 (43%), Gaps = 36/189 (19%) Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 + + D + P +T L++D+ ++L++G GTG + + L + Sbjct: 3 IKYNDDVYRPAEDTYLMMDNIKCGK----------KVLEIGAGTGIISVNLALNN--HDV 50 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184 DI KA+++ K NA N V+ + ++SD F ++ +D I+ NPPY L Sbjct: 51 TATDIDDKAIDLIKENARINHVNIKI--IKSDLFDNIYDKYDTIIFNPPY--------LP 100 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 +E D I GG DG + HLN +G S+ I + D+ + Sbjct: 101 VENED----IKWSGGSDGFNVTSRFLKDAYMHLNDNG--SIYIILSDLTDINK------- 147 Query: 245 FLVNAFKDY 253 L N FK+Y Sbjct: 148 -LKNDFKNY 155 >gi|330718919|ref|ZP_08313519.1| 16S RNA G1207 methylase RsmC [Leuconostoc fallax KCTC 3537] Length = 206 Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 29/75 (38%), Positives = 48/75 (64%), Gaps = 3/75 (4%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVG-VDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 +ILDLGTG G V +A+ K+ F + V VD++ +AL++A+ NA N V++ QSD + Sbjct: 69 KILDLGTGYGVVGIAVAKK--FKRTVDMVDVNERALQLARVNAKKNNVADVTHIFQSDVY 126 Query: 159 SSVEGLFDVIVSNPP 173 ++ + +I+ NPP Sbjct: 127 DNISEQYGLILVNPP 141 >gi|256005297|ref|ZP_05430263.1| methyltransferase small [Clostridium thermocellum DSM 2360] gi|255990733|gb|EEU00849.1| methyltransferase small [Clostridium thermocellum DSM 2360] gi|316939532|gb|ADU73566.1| methyltransferase small [Clostridium thermocellum DSM 1313] Length = 196 Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 34/75 (45%), Positives = 44/75 (58%), Gaps = 5/75 (6%) Query: 101 ILDLGTGTG--AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 ILD+G G G + LALL S F +DI+ +A+++A N NGV+ L SD F Sbjct: 59 ILDIGCGYGVIGISLALLNPSSFV--TMIDINERAVDLASQNIHLNGVTNA-TALTSDGF 115 Query: 159 SSVEGLFDVIVSNPP 173 S+V FD IVSNPP Sbjct: 116 SNVSDKFDAIVSNPP 130 >gi|307703575|ref|ZP_07640517.1| methyltransferase domain protein [Streptococcus oralis ATCC 35037] gi|307622982|gb|EFO01977.1| methyltransferase domain protein [Streptococcus oralis ATCC 35037] Length = 193 Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 32/93 (34%), Positives = 51/93 (54%), Gaps = 3/93 (3%) Query: 81 LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140 +VD L +E + +LD+G G G + L+L K + + VDI+ +AL++A+ N Sbjct: 38 MVDFGSQLLLKCLEVNEGETVLDVGCGYGPLGLSLAK-AYGVQATMVDINNRALDLARQN 96 Query: 141 AVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173 A N V QS+ + +EG FD ++SNPP Sbjct: 97 AERNKVEATI--FQSNIYEQIEGKFDHVISNPP 127 >gi|152986240|ref|YP_001348482.1| hypothetical protein PSPA7_3123 [Pseudomonas aeruginosa PA7] gi|150961398|gb|ABR83423.1| hypothetical protein PSPA7_3123 [Pseudomonas aeruginosa PA7] Length = 318 Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 41/141 (29%), Positives = 65/141 (46%), Gaps = 15/141 (10%) Query: 48 HESIHR-ILGWRD------------FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIE 94 H+ IHR GWR ++ TL++D P+T D + L ++ Sbjct: 75 HDLIHREAEGWRSRVRYSSLGDELLVHSAFPTLAADAVFFGPDTYRF-DRLIRSHLAALD 133 Query: 95 KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154 + R D+G G G + + P + G+DI+ AL++A+ NA GV + + Sbjct: 134 PTGIRRAADIGCGAGPGAIRIALACPDAEVHGLDINPAALDLARVNAALAGV-DNLTLAR 192 Query: 155 SDWFSSVEGLFDVIVSNPPYI 175 SD G FD+IV+NPPY+ Sbjct: 193 SDLLCQAPGRFDLIVANPPYL 213 >gi|226713003|sp|A0L0V1|RSMC_SHESA RecName: Full=Ribosomal RNA small subunit methyltransferase C; AltName: Full=16S rRNA m2G1207 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rsmC Length = 342 Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 27/75 (36%), Positives = 38/75 (50%), Gaps = 2/75 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+LD G G G + ALLK P +DI+ AL + NG++ + SD + Sbjct: 204 RVLDFGCGAGVIAAALLKAQPTLSLECIDINAMALASCELTLAANGMTAK--VYPSDGLA 261 Query: 160 SVEGLFDVIVSNPPY 174 G FD I+SNPP+ Sbjct: 262 QTSGKFDGIISNPPF 276 >gi|253583730|ref|ZP_04860928.1| ribosomal RNA small subunit methyltransferase C [Fusobacterium varium ATCC 27725] gi|251834302|gb|EES62865.1| ribosomal RNA small subunit methyltransferase C [Fusobacterium varium ATCC 27725] Length = 225 Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 28/78 (35%), Positives = 45/78 (57%), Gaps = 1/78 (1%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 +ILD+GTG G + + L+ + G+DI + +E+AK N N +++ + + D Sbjct: 43 KILDIGTGNGIIPVLLVSKEKGEDITGIDIQEENVELAKRNVQLNNLNDNIEIVHGDVKE 102 Query: 160 -SVEGLFDVIVSNPPYIE 176 S+ FD IVSNPPY+E Sbjct: 103 YSMGNSFDYIVSNPPYME 120 >gi|117921884|ref|YP_871076.1| 16S rRNA m(2)G 1207 methyltransferase [Shewanella sp. ANA-3] gi|117614216|gb|ABK49670.1| 16S rRNA m(2)G 1207 methyltransferase [Shewanella sp. ANA-3] Length = 353 Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 27/75 (36%), Positives = 38/75 (50%), Gaps = 2/75 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+LD G G G + ALLK P +DI+ AL + NG++ + SD + Sbjct: 215 RVLDFGCGAGVIAAALLKAQPTLSLECIDINAMALASCELTLAANGMTAK--VYPSDGLA 272 Query: 160 SVEGLFDVIVSNPPY 174 G FD I+SNPP+ Sbjct: 273 QTSGKFDGIISNPPF 287 >gi|125975416|ref|YP_001039326.1| methyltransferase small [Clostridium thermocellum ATCC 27405] gi|281419377|ref|ZP_06250392.1| methyltransferase [Clostridium thermocellum JW20] gi|125715641|gb|ABN54133.1| 16S rRNA m(2)G 1207 methyltransferase [Clostridium thermocellum ATCC 27405] gi|281406997|gb|EFB37260.1| methyltransferase [Clostridium thermocellum JW20] Length = 196 Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 34/75 (45%), Positives = 44/75 (58%), Gaps = 5/75 (6%) Query: 101 ILDLGTGTG--AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 ILD+G G G + LALL S F +DI+ +A+++A N NGV+ L SD F Sbjct: 59 ILDIGCGYGVIGISLALLNPSSFV--TMIDINERAVDLASQNIHLNGVTNA-TALTSDGF 115 Query: 159 SSVEGLFDVIVSNPP 173 S+V FD IVSNPP Sbjct: 116 SNVSDKFDAIVSNPP 130 >gi|300689993|ref|YP_003750988.1| methyltransferase, methylase of polypeptide chain release factors [Ralstonia solanacearum PSI07] gi|299077053|emb|CBJ49669.1| putative methyltransferase, Methylase of polypeptide chain release factors [Ralstonia solanacearum PSI07] Length = 420 Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 35/104 (33%), Positives = 56/104 (53%), Gaps = 4/104 (3%) Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162 D+GTGTG V A+L + + VG D +AL A+ N G+ + + +++D F E Sbjct: 247 DIGTGTG-VLAAVLAKRGVKRVVGTDQDARALACARENLTRLGLQSQVEVIEADLFP--E 303 Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206 G +IV NPP++ + + V D D R+ L G +DGL+ + Sbjct: 304 GRAPLIVCNPPWLPARPSSPIERAVYDPDSRM-LRGFLDGLAAH 346 >gi|170288954|ref|YP_001739192.1| methyltransferase small [Thermotoga sp. RQ2] gi|170176457|gb|ACB09509.1| methyltransferase small [Thermotoga sp. RQ2] Length = 210 Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 37/103 (35%), Positives = 53/103 (51%), Gaps = 10/103 (9%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE--RFDTLQSDW 157 ++LDLG G G + + L KE P + DI+ +A+E AK NA + V R+ L W Sbjct: 63 KVLDLGCGYGVIGIVLKKEYPDLEVYMSDINKRAVEFAKINAKNHNVEVDIRWGNLYEPW 122 Query: 158 FSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199 EG+ FD+IVSNPP + V +E+ P +GG Sbjct: 123 ----EGMKFDMIVSNPPIVAGKKV---WMEIVKSAPEFLEEGG 158 >gi|293365627|ref|ZP_06612336.1| methyltransferase domain protein [Streptococcus oralis ATCC 35037] gi|291315995|gb|EFE56439.1| methyltransferase domain protein [Streptococcus oralis ATCC 35037] Length = 196 Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 32/93 (34%), Positives = 51/93 (54%), Gaps = 3/93 (3%) Query: 81 LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140 +VD L +E + +LD+G G G + L+L K + + VDI+ +AL++A+ N Sbjct: 41 MVDFGSQLLLKCLEVNEGETVLDVGCGYGPLGLSLAK-AYGVQATMVDINNRALDLARQN 99 Query: 141 AVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173 A N V QS+ + +EG FD ++SNPP Sbjct: 100 AERNKVEATI--FQSNIYEQIEGKFDHVISNPP 130 >gi|331266183|ref|YP_004325813.1| 16S RNA G1207 methylase RsmC [Streptococcus oralis Uo5] gi|326682855|emb|CBZ00472.1| 16S RNA G1207 methylase RsmC [Streptococcus oralis Uo5] Length = 196 Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 33/96 (34%), Positives = 53/96 (55%), Gaps = 3/96 (3%) Query: 78 TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137 ++ +VD L +E + +LD+G G G + L+L K + + VDI+ +AL++A Sbjct: 38 SKKMVDFGSQLLLKCLEVNEGETVLDVGCGYGPLGLSLAK-AYGAQATMVDINNRALDLA 96 Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173 + NA N V QS+ + VEG FD ++SNPP Sbjct: 97 RQNAERNKVEATI--FQSNIYEQVEGKFDHVISNPP 130 >gi|323307444|gb|EGA60718.1| Mtq1p [Saccharomyces cerevisiae FostersO] Length = 314 Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 44/168 (26%), Positives = 77/168 (45%), Gaps = 7/168 (4%) Query: 41 AIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL-AFSLPRIEKRDV- 98 A ++ KH + IL + F + + PR ETE V + + A + + + + Sbjct: 52 ACLQRYKHVPLQYILRSQPFGALDIVCKPGVLIPRWETEEWVMAIIRALNNSMLSRHTIP 111 Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE----RFDTLQ 154 + I D TGTG + LAL +D+S +A+++ K N + N VS + + L Sbjct: 112 LHICDTFTGTGCIALALSHGIANCTFTAIDVSTRAIKLVKENMLKNKVSGGKLVQHNILS 171 Query: 155 SDWFSSVEGLFDVIVSNPPYIESVIVDC-LGLEVRDFDPRISLDGGID 201 S D++ NPPYI + + V+ F+PR++L G ++ Sbjct: 172 SKASDEYPSHIDILTGNPPYIRKRDFNRDVKTSVKLFEPRLALVGELE 219 >gi|307706395|ref|ZP_07643206.1| methyltransferase domain protein [Streptococcus mitis SK321] gi|307618211|gb|EFN97367.1| methyltransferase domain protein [Streptococcus mitis SK321] Length = 193 Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 33/96 (34%), Positives = 53/96 (55%), Gaps = 3/96 (3%) Query: 78 TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137 ++ +VD L +E +LD+G G G + L+L K + + VDI+ +AL++A Sbjct: 35 SKKMVDFGSQLLLKCLEVNQGETVLDVGCGYGPLGLSLAK-AYGVQATMVDINNRALDLA 93 Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173 + NA N V+ QS+ + VEG FD ++SNPP Sbjct: 94 RQNAERNKVAATI--FQSNIYEQVEGKFDHVISNPP 127 >gi|188501470|gb|ACD54602.1| modification methylase HemK family-like protein [Adineta vaga] Length = 322 Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 30/78 (38%), Positives = 43/78 (55%), Gaps = 2/78 (2%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 V R++D+G G G + L K P + +GVDI+ AL + NA V+ SD Sbjct: 143 VRRVVDIGCGAGPGAIMLAKTYPNAEILGVDINDTALRLTSINARLANVN--VVACHSDL 200 Query: 158 FSSVEGLFDVIVSNPPYI 175 V+G FD+I+SNPPY+ Sbjct: 201 LKDVQGDFDMIISNPPYL 218 >gi|281412563|ref|YP_003346642.1| methyltransferase small [Thermotoga naphthophila RKU-10] gi|281373666|gb|ADA67228.1| methyltransferase small [Thermotoga naphthophila RKU-10] Length = 210 Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 37/103 (35%), Positives = 53/103 (51%), Gaps = 10/103 (9%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE--RFDTLQSDW 157 ++LDLG G G + + L KE P + DI+ +A+E AK NA + V R+ L W Sbjct: 63 KVLDLGCGYGVIGIVLKKEYPDLEVYMSDINKRAVEFAKINAKNHNVEVDIRWGNLYEPW 122 Query: 158 FSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199 EG+ FD+IVSNPP + V +E+ P +GG Sbjct: 123 ----EGMKFDMIVSNPPIVAGKKV---WMEIVKRAPEFLEEGG 158 >gi|226713002|sp|Q0HRD8|RSMC_SHESR RecName: Full=Ribosomal RNA small subunit methyltransferase C; AltName: Full=16S rRNA m2G1207 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rsmC Length = 342 Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 27/75 (36%), Positives = 38/75 (50%), Gaps = 2/75 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+LD G G G + ALLK P +DI+ AL + NG++ + SD + Sbjct: 204 RVLDFGCGAGVIAAALLKAQPTLSLECIDINAMALASCELTLAANGMTAK--VYPSDGLA 261 Query: 160 SVEGLFDVIVSNPPY 174 G FD I+SNPP+ Sbjct: 262 QTSGKFDGIISNPPF 276 >gi|226713001|sp|Q0HMF0|RSMC_SHESM RecName: Full=Ribosomal RNA small subunit methyltransferase C; AltName: Full=16S rRNA m2G1207 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rsmC Length = 342 Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 27/75 (36%), Positives = 38/75 (50%), Gaps = 2/75 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+LD G G G + ALLK P +DI+ AL + NG++ + SD + Sbjct: 204 RVLDFGCGAGVIAAALLKAQPTLSLECIDINAMALASCELTLAANGMTAK--VYPSDGLA 261 Query: 160 SVEGLFDVIVSNPPY 174 G FD I+SNPP+ Sbjct: 262 QTSGKFDGIISNPPF 276 >gi|114048824|ref|YP_739374.1| 16S rRNA m(2)G 1207 methyltransferase [Shewanella sp. MR-7] gi|113890266|gb|ABI44317.1| 16S rRNA m(2)G 1207 methyltransferase [Shewanella sp. MR-7] Length = 353 Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 27/75 (36%), Positives = 38/75 (50%), Gaps = 2/75 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+LD G G G + ALLK P +DI+ AL + NG++ + SD + Sbjct: 215 RVLDFGCGAGVIAAALLKAQPTLSLECIDINAMALASCELTLAANGMTAK--VYPSDGLA 272 Query: 160 SVEGLFDVIVSNPPY 174 G FD I+SNPP+ Sbjct: 273 QTSGKFDGIISNPPF 287 >gi|154494856|ref|ZP_02033861.1| hypothetical protein PARMER_03900 [Parabacteroides merdae ATCC 43184] gi|154085406|gb|EDN84451.1| hypothetical protein PARMER_03900 [Parabacteroides merdae ATCC 43184] Length = 238 Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 45/153 (29%), Positives = 73/153 (47%), Gaps = 19/153 (12%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 RILD+GTGTG + L L + S K +DI A A+ NA ++ + R + SD Sbjct: 40 RILDIGTGTGLIALMLAQRS---KAAIDAIDIEADACLQAQENAESSLFAGRINVFHSDL 96 Query: 158 FSSVEG---LFDVIVSNPPY-IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213 + L+D+IVSNPPY ++S+ L ++L+ D L + R + Sbjct: 97 VDFAQASTHLYDLIVSNPPYFVDSLKCPNLQRNTARHTDTLTLE---DLLQYSRKL---- 149 Query: 214 SRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246 L G ++ + Y+QK + +++ LFL Sbjct: 150 ---LTPQGRIALILPYDQKDRLTDCIQTQNLFL 179 >gi|144898410|emb|CAM75274.1| conserved hypothetical protein [Magnetospirillum gryphiswaldense MSR-1] Length = 249 Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 29/88 (32%), Positives = 47/88 (53%), Gaps = 4/88 (4%) Query: 93 IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152 ++ R RILDLG+G G L LL G+++ + ++A++NAV NG+ R+ Sbjct: 41 VDARAGERILDLGSGVGTAGLCLLARVDGIHVTGLELQSQLADLAQANAVENGLDGRYTV 100 Query: 153 LQSDWFSSVEGL----FDVIVSNPPYIE 176 +Q S L FD +++NPP+ E Sbjct: 101 VQGCLTSRPATLRGVTFDHVITNPPWYE 128 >gi|330990855|ref|ZP_08314810.1| Putative adenine-specific methylase [Gluconacetobacter sp. SXCC-1] gi|329762001|gb|EGG78490.1| Putative adenine-specific methylase [Gluconacetobacter sp. SXCC-1] Length = 323 Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 30/78 (38%), Positives = 43/78 (55%), Gaps = 1/78 (1%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 VR +D+G GTG + + + P + V VDI+ AL +A+ N GV Q D Sbjct: 146 VRAVDIGCGTGLGAIMIAQVCPSTEVVMVDINPDALRLARINVGLAGVGG-IMAWQGDLL 204 Query: 159 SSVEGLFDVIVSNPPYIE 176 S + G FD+I+SNPPY+ Sbjct: 205 SGLSGAFDLIISNPPYLP 222 >gi|220915946|ref|YP_002491250.1| methyltransferase small [Anaeromyxobacter dehalogenans 2CP-1] gi|219953800|gb|ACL64184.1| methyltransferase small [Anaeromyxobacter dehalogenans 2CP-1] Length = 386 Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 34/96 (35%), Positives = 51/96 (53%), Gaps = 6/96 (6%) Query: 97 DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 D R D+GTGTG LAL+ + + D+ +A+ A+ NA G++ + + +++D Sbjct: 204 DGKRAFDVGTGTG--VLALVLARAGARVIATDLEPRAVACARENAARLGLAGQVEVVEAD 261 Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDP 192 F EGL DVIV NPP+I L V +DP Sbjct: 262 LFP--EGLADVIVCNPPWIPGPARGPLERAV--YDP 293 >gi|113969031|ref|YP_732824.1| 16S rRNA m(2)G 1207 methyltransferase [Shewanella sp. MR-4] gi|113883715|gb|ABI37767.1| 16S rRNA m(2)G 1207 methyltransferase [Shewanella sp. MR-4] Length = 353 Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 27/75 (36%), Positives = 38/75 (50%), Gaps = 2/75 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+LD G G G + ALLK P +DI+ AL + NG++ + SD + Sbjct: 215 RVLDFGCGAGVIAAALLKAQPTLSLECIDINAMALASCELTLAANGMTAK--VYPSDGLA 272 Query: 160 SVEGLFDVIVSNPPY 174 G FD I+SNPP+ Sbjct: 273 QTSGKFDGIISNPPF 287 >gi|167747821|ref|ZP_02419948.1| hypothetical protein ANACAC_02543 [Anaerostipes caccae DSM 14662] gi|167653183|gb|EDR97312.1| hypothetical protein ANACAC_02543 [Anaerostipes caccae DSM 14662] Length = 250 Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 30/98 (30%), Positives = 53/98 (54%), Gaps = 6/98 (6%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 +D+ L S +++K +LDLGTGTG + + + ++P G++I + +A +A Sbjct: 32 MDAVLLSSFVKVKKNG--NVLDLGTGTGILPILMEAKTPGRHFTGLEIQSEMAGMAARSA 89 Query: 142 VTNGVSERFDTLQSDWFSS----VEGLFDVIVSNPPYI 175 NG+ E+ + ++ D + FDVI SNPPY+ Sbjct: 90 ALNGLEEKIEIVEGDITKASAIFSHDSFDVITSNPPYM 127 >gi|226309668|ref|YP_002769562.1| hypothetical protein BBR47_00810 [Brevibacillus brevis NBRC 100599] gi|226092616|dbj|BAH41058.1| conserved hypothetical protein [Brevibacillus brevis NBRC 100599] Length = 255 Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 30/101 (29%), Positives = 49/101 (48%), Gaps = 6/101 (5%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 +D+ L + KR ++LD+ TG GA+ L + +P G++I + +A N Sbjct: 36 MDAVLLARFASVPKRG--KVLDMCTGNGAIPLIMTTRTPEASFDGIEIQERLFSMASRNV 93 Query: 142 VTNGVSERFDTLQSDWFSSV----EGLFDVIVSNPPYIESV 178 NG++ER D +V G FD+I NPPY+ + Sbjct: 94 TLNGLNERITMHHGDVKDAVSLFGHGNFDLITCNPPYMPAT 134 >gi|310825775|ref|YP_003958132.1| Predicted O-methyltransferase [Eubacterium limosum KIST612] gi|308737509|gb|ADO35169.1| Predicted O-methyltransferase [Eubacterium limosum KIST612] Length = 263 Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 28/85 (32%), Positives = 47/85 (55%), Gaps = 4/85 (4%) Query: 96 RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155 R R++DLGTGTG + L L + K ++I +E+A + NG+ E+ + + Sbjct: 46 RKKSRVIDLGTGTGIIPLLLYGRTGAQKIQALEIQENMVEMAGRSIACNGLEEKIEIIHG 105 Query: 156 DWFSSVEGL----FDVIVSNPPYIE 176 D + E + +DV+VSNPPY++ Sbjct: 106 DIRNPGEQVRPTSYDVVVSNPPYMK 130 >gi|300172663|ref|YP_003771828.1| ribosomal RNA small subunit methyltransferase C [Leuconostoc gasicomitatum LMG 18811] gi|299887041|emb|CBL91009.1| Ribosomal RNA small subunit methyltransferase C [Leuconostoc gasicomitatum LMG 18811] Length = 213 Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 5/76 (6%) Query: 100 RILDLGTGTGAVCLALLK--ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 +ILDLGTG G V +A+ K + P D++ +AL +A+ NA NGV + QSD Sbjct: 70 KILDLGTGYGPVGVAVAKYLQQPVDM---TDVNERALALARKNAEQNGVIGLVNVFQSDI 126 Query: 158 FSSVEGLFDVIVSNPP 173 +++V + +I++NPP Sbjct: 127 YANVSDKYALILANPP 142 >gi|256004046|ref|ZP_05429031.1| methyltransferase small [Clostridium thermocellum DSM 2360] gi|281419117|ref|ZP_06250134.1| Methyltransferase type 11 [Clostridium thermocellum JW20] gi|255991969|gb|EEU02066.1| methyltransferase small [Clostridium thermocellum DSM 2360] gi|281407266|gb|EFB37527.1| Methyltransferase type 11 [Clostridium thermocellum JW20] gi|316941710|gb|ADU75744.1| Methyltransferase type 11 [Clostridium thermocellum DSM 1313] Length = 254 Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 31/98 (31%), Positives = 55/98 (56%), Gaps = 6/98 (6%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 +D+ L + I+K D V +DLGTGTG + + + ++ +G++I + E+A+ + Sbjct: 35 LDAVLLANFADIKKGDTV--IDLGTGTGIIAILIAGKTEAKSIIGLEIQEEMAEMAQRSV 92 Query: 142 VTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPYI 175 N + +R + D +SVE FDV+V+NPPY+ Sbjct: 93 KLNNLEDRVKIVCGDIKNSVEMFGASKFDVVVTNPPYM 130 >gi|52425643|ref|YP_088780.1| 16S ribosomal RNA m2G1207 methyltransferase [Mannheimia succiniciproducens MBEL55E] gi|81825502|sp|Q65S65|RSMC_MANSM RecName: Full=Ribosomal RNA small subunit methyltransferase C; AltName: Full=16S rRNA m2G1207 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rsmC gi|52307695|gb|AAU38195.1| RsmC protein [Mannheimia succiniciproducens MBEL55E] Length = 333 Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 32/85 (37%), Positives = 48/85 (56%), Gaps = 4/85 (4%) Query: 96 RDVVR--ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153 +D +R +LDLG G G + + ++P K DI AL A+ + N +S + L Sbjct: 190 KDNIRGDVLDLGCGAGVIGSMIKLKNPPAKVTMTDIHAMALASAERTLLENKLSGQ--VL 247 Query: 154 QSDWFSSVEGLFDVIVSNPPYIESV 178 SD FS VEG FD+I+SNPP+ + + Sbjct: 248 ASDVFSHVEGKFDLIISNPPFHDGI 272 >gi|104782146|ref|YP_608644.1| DNA methylase [Pseudomonas entomophila L48] gi|95111133|emb|CAK15853.1| putative DNA methylase [Pseudomonas entomophila L48] Length = 317 Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 28/74 (37%), Positives = 41/74 (55%), Gaps = 1/74 (1%) Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 +D+G GTG L++ + +P + VDI+ AL NA GV+ SD + V Sbjct: 142 VDIGCGTGVGALSIARAAPQAQVTAVDINPLALRYTAVNAALAGVAN-VSPQASDLLNGV 200 Query: 162 EGLFDVIVSNPPYI 175 G FD+IV+NPPY+ Sbjct: 201 SGHFDLIVANPPYM 214 >gi|73670682|ref|YP_306697.1| HemK-like protein [Methanosarcina barkeri str. Fusaro] gi|72397844|gb|AAZ72117.1| HemK related protein [Methanosarcina barkeri str. Fusaro] Length = 202 Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 51/170 (30%), Positives = 75/170 (44%), Gaps = 22/170 (12%) Query: 72 FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131 +EP ++ LL D+AL + P + RIL++GTG+G V LL V +I+ Sbjct: 20 YEPAEDSFLLADAALKDAKPGM------RILEIGTGSGFVSSVLLTNLKEIYLVATEINP 73 Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYI----ESVIVDCLGLEV 187 A AK N V ++ F ++S + E LFD+I+ NPPY+ E + L Sbjct: 74 HAARCAKMNGVKVIRTDLFKGIKS---KNPENLFDLILFNPPYLPTSEEEKVPGWL---- 126 Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237 + DGGI G D V +L G V I +D V+ Sbjct: 127 -----NYAFDGGISGRDTLDRFLDEVRDYLKLGGEILVLISSITGLDAVK 171 >gi|258653913|ref|YP_003203069.1| methyltransferase small [Nakamurella multipartita DSM 44233] gi|258557138|gb|ACV80080.1| methyltransferase small [Nakamurella multipartita DSM 44233] Length = 509 Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 52/154 (33%), Positives = 69/154 (44%), Gaps = 19/154 (12%) Query: 75 RPETELLVDSALAFSLPRIEKRD-VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133 RP+ L + SA + +L R RD V LDLGTG G L L + V DIS +A Sbjct: 142 RPDHVLGLGSA-SITLARAIVRDPVTTALDLGTGCGIQALHLAGHAGSI--VATDISPRA 198 Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDP 192 L +A + A N + +D F V G FD+IVSNPP++ V D Sbjct: 199 LALAGATARLN--QQHWDLRAGSLFDPVAGEQFDLIVSNPPFV-----------VGDGTT 245 Query: 193 RISL-DGGIDGLSHYRTIADGVSRHLNKDGLCSV 225 R + D G+ G R I +G HL G + Sbjct: 246 RFTYRDSGLPGDGVGRAIVEGARTHLRPGGTAQL 279 >gi|168334101|ref|ZP_02692314.1| Methyltransferase type 11 [Epulopiscium sp. 'N.t. morphotype B'] Length = 248 Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 32/82 (39%), Positives = 44/82 (53%), Gaps = 4/82 (4%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT--LQSDW 157 +ILD+GTGTG + L L K VG+DI +E+A + N VS + L Sbjct: 48 KILDIGTGTGIIPLILYAIHKKGKFVGIDIQEAMVEMASRTMMLNQVSNEIEIKCLDIKN 107 Query: 158 FSS--VEGLFDVIVSNPPYIES 177 F G FD+IVSNPPY+++ Sbjct: 108 FGQDFKRGSFDIIVSNPPYMKA 129 >gi|320530691|ref|ZP_08031735.1| methyltransferase small domain protein [Selenomonas artemidis F0399] gi|320136978|gb|EFW28916.1| methyltransferase small domain protein [Selenomonas artemidis F0399] Length = 215 Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 33/101 (32%), Positives = 53/101 (52%), Gaps = 16/101 (15%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 +D+ L PR+ R+ R+LDLGTG G + L ++ E + + V+++ +A NA Sbjct: 1 MDAVLLAHFPRLTGRE--RVLDLGTGAGVIPLLIVDE--VREVLAVELNSAQAALAVRNA 56 Query: 142 VTNGVSERFDTLQSDW--------FSSVEGLFDVIVSNPPY 174 NGVSE+ + D+ F S FD++ +NPPY Sbjct: 57 ALNGVSEKITVREGDYRDPPALFVFES----FDLVFANPPY 93 >gi|307704613|ref|ZP_07641515.1| methyltransferase domain protein [Streptococcus mitis SK597] gi|307621815|gb|EFO00850.1| methyltransferase domain protein [Streptococcus mitis SK597] Length = 193 Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 29/73 (39%), Positives = 44/73 (60%), Gaps = 3/73 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LD+G G G + L+L K + + VDI+ +AL++A+ NA N V QS+ + Sbjct: 58 VLDVGCGYGPLGLSLAK-AYGVQATMVDINNRALDLARQNAERNKVEATI--FQSNIYEQ 114 Query: 161 VEGLFDVIVSNPP 173 VEG FD ++SNPP Sbjct: 115 VEGTFDHVISNPP 127 >gi|322376393|ref|ZP_08050886.1| methyltransferase domain protein [Streptococcus sp. M334] gi|321282200|gb|EFX59207.1| methyltransferase domain protein [Streptococcus sp. M334] Length = 196 Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 29/73 (39%), Positives = 44/73 (60%), Gaps = 3/73 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LD+G G G + L+L K + + VDI+ +AL++A+ NA N V QS+ + Sbjct: 61 VLDVGCGYGTLGLSLAK-AYGVQATMVDINNRALDLARQNAERNKVEATI--FQSNIYEQ 117 Query: 161 VEGLFDVIVSNPP 173 VEG FD ++SNPP Sbjct: 118 VEGKFDHVISNPP 130 >gi|296111507|ref|YP_003621889.1| hypothetical protein LKI_06905 [Leuconostoc kimchii IMSNU 11154] gi|295833039|gb|ADG40920.1| hypothetical protein LKI_06905 [Leuconostoc kimchii IMSNU 11154] Length = 213 Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 28/75 (37%), Positives = 47/75 (62%), Gaps = 3/75 (4%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGV-DISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 +ILDLGTG G V +A+ K + V + D++ +AL++A+ NA NGV ++ QSD + Sbjct: 70 KILDLGTGYGPVGVAIAKA--LNRRVDMSDVNERALDLARQNADNNGVGDQVKIFQSDMY 127 Query: 159 SSVEGLFDVIVSNPP 173 ++ + +I+ NPP Sbjct: 128 DNISDKYALILVNPP 142 >gi|227112602|ref|ZP_03826258.1| 16S ribosomal RNA m2G1207 methyltransferase [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 349 Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 25/75 (33%), Positives = 43/75 (57%), Gaps = 2/75 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LD+ G G + L K+SP + D+S A+E +K+ N + + + S+ +S Sbjct: 199 KVLDIACGAGVLASVLAKQSPKIRLTLSDVSAAAIESSKATLAANALEG--EVIASNVYS 256 Query: 160 SVEGLFDVIVSNPPY 174 + G FD+IVSNPP+ Sbjct: 257 DINGRFDMIVSNPPF 271 >gi|323439811|gb|EGA97528.1| methyltransferase small subunit [Staphylococcus aureus O11] Length = 202 Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 50/156 (32%), Positives = 70/156 (44%), Gaps = 22/156 (14%) Query: 19 SHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPET 78 SH DP SV+ + QR I LKH I I F ++ SD Sbjct: 2 SHYYDEDP-SVISNEQR------IQYQLKHHKIDLITDNGVFSKDKVDYGSD-------- 46 Query: 79 ELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAK 138 +LV + L P KR I D+G G G + L + K SP +D++ +AL + K Sbjct: 47 -VLVQTFLKTRPPGPSKR----IADVGCGYGPIGLMIAKVSPHHSITMLDVNHRALALVK 101 Query: 139 SNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPP 173 N NG+ + +SD S+VE FD I++NPP Sbjct: 102 KNQKLNGI-DNVIVKESDALSAVEDKSFDFILTNPP 136 >gi|125974592|ref|YP_001038502.1| methyltransferase small [Clostridium thermocellum ATCC 27405] gi|125714817|gb|ABN53309.1| methyltransferase small [Clostridium thermocellum ATCC 27405] Length = 251 Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 31/98 (31%), Positives = 55/98 (56%), Gaps = 6/98 (6%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 +D+ L + I+K D V +DLGTGTG + + + ++ +G++I + E+A+ + Sbjct: 32 LDAVLLANFADIKKGDTV--IDLGTGTGIIAILIAGKTEAKSIIGLEIQEEMAEMAQRSV 89 Query: 142 VTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPYI 175 N + +R + D +SVE FDV+V+NPPY+ Sbjct: 90 KLNNLEDRVKIVCGDIKNSVEMFGASKFDVVVTNPPYM 127 >gi|218131078|ref|ZP_03459882.1| hypothetical protein BACEGG_02682 [Bacteroides eggerthii DSM 20697] gi|317477035|ref|ZP_07936277.1| methyltransferase domain-containing protein [Bacteroides eggerthii 1_2_48FAA] gi|217986782|gb|EEC53115.1| hypothetical protein BACEGG_02682 [Bacteroides eggerthii DSM 20697] gi|316906828|gb|EFV28540.1| methyltransferase domain-containing protein [Bacteroides eggerthii 1_2_48FAA] Length = 236 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 1/80 (1%) Query: 96 RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155 ++ ILD+G G+G + L L + +P+ ++I A AK N ++ S+R + + S Sbjct: 36 QNAKYILDVGAGSGLISLQLAQRNPWASITSIEIDPAAAAQAKENIQSSPWSDRMEVICS 95 Query: 156 DWFS-SVEGLFDVIVSNPPY 174 D+ E FD+IVSNPPY Sbjct: 96 DFRDYHAENKFDLIVSNPPY 115 >gi|222152110|ref|YP_002561270.1| hypothetical protein MCCL_1867 [Macrococcus caseolyticus JCSC5402] gi|222121239|dbj|BAH18574.1| conserved hypothetical protein [Macrococcus caseolyticus JCSC5402] Length = 198 Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 42/130 (32%), Positives = 64/130 (49%), Gaps = 15/130 (11%) Query: 48 HES-IHRILGWRDFYNVRLTLSSDTFEPRP---ETELLVDSALAFSLPRIEKRDVVRILD 103 HES I I+G D ++LT S F + LLV + L + P +R+LD Sbjct: 14 HESTISFIMGRHD---LKLTTDSGVFSKGGVDFGSNLLVKTFLEDAHP-------IRVLD 63 Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG 163 +G G G + L + K P VD++ +AL +A+ NA+ N V + SD + V Sbjct: 64 VGCGYGTMGLMIAKHFPDCTLHMVDVNERALNLARKNAMHNNVKD-VHIYISDGLNEVTE 122 Query: 164 LFDVIVSNPP 173 FD +++NPP Sbjct: 123 FFDAVITNPP 132 >gi|160915108|ref|ZP_02077321.1| hypothetical protein EUBDOL_01116 [Eubacterium dolichum DSM 3991] gi|158432907|gb|EDP11196.1| hypothetical protein EUBDOL_01116 [Eubacterium dolichum DSM 3991] Length = 221 Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 33/95 (34%), Positives = 52/95 (54%), Gaps = 4/95 (4%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 D+AL +I K + R+LD+GT GA+ LA + P + GV+I +A E+A+ N Sbjct: 28 TDTALLAEFMKINKGE--RVLDVGTNNGALLLAANRYEPSYL-YGVEIQEEAAELARMNM 84 Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE 176 +G+ D L +D+ + DV+V NPPY + Sbjct: 85 RHHGIVHA-DILCADYKEASLPAVDVVVCNPPYFK 118 >gi|328958740|ref|YP_004376126.1| ribosomal RNA methyltransferase [Carnobacterium sp. 17-4] gi|328675064|gb|AEB31110.1| ribosomal RNA methyltransferase [Carnobacterium sp. 17-4] Length = 204 Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 35/74 (47%), Positives = 43/74 (58%), Gaps = 2/74 (2%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 ILD+G G G + LAL KE P VD++ +AL +AK NA N +S SD + S Sbjct: 63 ILDVGCGYGPMGLALAKEDPERNVEMVDVNERALGLAKQNASNNRLSNVL-IHTSDIYES 121 Query: 161 VEGL-FDVIVSNPP 173 VEG F IVSNPP Sbjct: 122 VEGKEFAAIVSNPP 135 >gi|229492339|ref|ZP_04386146.1| putative methylase [Rhodococcus erythropolis SK121] gi|229320748|gb|EEN86562.1| putative methylase [Rhodococcus erythropolis SK121] Length = 224 Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 44/111 (39%), Positives = 63/111 (56%), Gaps = 9/111 (8%) Query: 72 FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131 + P+ +T LL D AL F R+ R R+LDL TGTGA+ +A V VDIS Sbjct: 10 YPPQHDTSLLAD-ALLFE--RLTARS--RVLDLCTGTGALAVAASAAG-AGHVVAVDISR 63 Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181 +A A+ N + NG S D+ + D +V G LFD+++SNPPY+ ++ D Sbjct: 64 RACANARLNGILNGTS--IDSRRGDLTEAVHGELFDLVISNPPYVPALADD 112 >gi|255657495|ref|ZP_05402904.1| hypothetical protein CdifQCD-2_17756 [Clostridium difficile QCD-23m63] gi|296449091|ref|ZP_06890881.1| SAM-dependent methyltransferase [Clostridium difficile NAP08] gi|296879914|ref|ZP_06903887.1| SAM-dependent methyltransferase [Clostridium difficile NAP07] gi|296262184|gb|EFH08989.1| SAM-dependent methyltransferase [Clostridium difficile NAP08] gi|296429203|gb|EFH15077.1| SAM-dependent methyltransferase [Clostridium difficile NAP07] Length = 248 Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 30/98 (30%), Positives = 54/98 (55%), Gaps = 6/98 (6%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 +D+ L + +I+K +++DLGTGTG + + + +S K +GV+I E+A + Sbjct: 30 IDAVLLANFTKIKKD--AKVVDLGTGTGIIPILIAGKSEAKKIIGVEIQEDVYEMATRSV 87 Query: 142 VTNGVSERFDTLQSD--WFSSVEGL--FDVIVSNPPYI 175 NG+ ER + + D + V + + V+ SNPPY+ Sbjct: 88 KLNGLEERVEIINEDIKYIDKVLDVNGYHVVTSNPPYM 125 >gi|326328870|ref|ZP_08195204.1| putative transferase [Nocardioidaceae bacterium Broad-1] gi|325953355|gb|EGD45361.1| putative transferase [Nocardioidaceae bacterium Broad-1] Length = 492 Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 36/94 (38%), Positives = 50/94 (53%), Gaps = 4/94 (4%) Query: 84 SALAFSLPRIEKRDVV-RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142 S + SL ++ RD V LDLGTG G L L S + V D++ +AL I NA Sbjct: 136 SPASTSLAQLTIRDEVGTALDLGTGCGVQALHLATHSD--RVVATDVNQRALWITAFNAA 193 Query: 143 TNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYI 175 N V++R D +F V G FD+I +NPP++ Sbjct: 194 LNDVADRIDVRDGSFFEPVAGERFDLIATNPPFV 227 >gi|294495697|ref|YP_003542190.1| methylase [Methanohalophilus mahii DSM 5219] gi|292666696|gb|ADE36545.1| methylase [Methanohalophilus mahii DSM 5219] Length = 197 Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 46/162 (28%), Positives = 77/162 (47%), Gaps = 18/162 (11%) Query: 60 FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119 + N +++ +D +EP ++ LL D A+ RI D +++L++G G+G V A++ + Sbjct: 6 YRNAFVSIENDVYEPAEDSFLLADVAI----DRI--SDGMKVLEMGVGSGFVS-AVVAAN 58 Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179 + G DI+ ALE A N + S F L + FDVI+ NPPY+ + Sbjct: 59 KNVEPTGCDINPDALECAYKNGIQVFRSNLFGGLTKKAY------FDVILFNPPYLPTSE 112 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221 + L + + DGG++G T VS +L G Sbjct: 113 EEKLEGWL-----NYAFDGGVEGRDIIATFFAEVSDYLKPGG 149 >gi|160888233|ref|ZP_02069236.1| hypothetical protein BACUNI_00642 [Bacteroides uniformis ATCC 8492] gi|156862179|gb|EDO55610.1| hypothetical protein BACUNI_00642 [Bacteroides uniformis ATCC 8492] Length = 235 Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 28/76 (36%), Positives = 42/76 (55%), Gaps = 1/76 (1%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 RILD+GTGTG + L L + +P + ++I A A N + ++R + + D+ Sbjct: 40 RILDVGTGTGLIALQLAQRNPHARITAIEIDAAAAGQATENVSHSPWADRVEVICHDFRD 99 Query: 160 -SVEGLFDVIVSNPPY 174 E FD+IVSNPPY Sbjct: 100 YQPENRFDLIVSNPPY 115 >gi|160942758|ref|ZP_02089999.1| hypothetical protein FAEPRAM212_00235 [Faecalibacterium prausnitzii M21/2] gi|158445923|gb|EDP22926.1| hypothetical protein FAEPRAM212_00235 [Faecalibacterium prausnitzii M21/2] gi|295103833|emb|CBL01377.1| [LSU ribosomal protein L11P]-lysine N-methyltransferase [Faecalibacterium prausnitzii SL3/3] Length = 304 Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 40/134 (29%), Positives = 57/134 (42%), Gaps = 19/134 (14%) Query: 56 GWRDFYNVRLTLSSDTFEPRPE------TELLVDSALAFSLPRIEK------------RD 97 GWR +Y+ S P + +L++D LAF E R Sbjct: 108 GWRKYYHPMEIGSRLAVVPSWQQYDTDRVKLILDPGLAFGTGGHETTSLCLEALDEQVRG 167 Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 R+LD+GTG+G + +A LK GVDI A+ A NA NGV ++ L D Sbjct: 168 GERVLDIGTGSGILAIAALKLGAA-SAEGVDIDPVAVRTAGENAALNGVQDKLTVLVGDL 226 Query: 158 FSSVEGLFDVIVSN 171 G +D+I +N Sbjct: 227 SDKASGTYDIITAN 240 >gi|304315614|ref|YP_003850759.1| methyltransferase small [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302777116|gb|ADL67675.1| methyltransferase small [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 248 Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 26/80 (32%), Positives = 46/80 (57%), Gaps = 4/80 (5%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 +I+DLG GTG + + + +S GV+I +IAK N V N +++R + + D + Sbjct: 45 KIIDLGCGTGIIPILIAGKSSNTHVTGVEIQRDVADIAKRNVVLNNLTDRIEIINDDIRN 104 Query: 160 SVEGL----FDVIVSNPPYI 175 V+ L +D++ +NPPY+ Sbjct: 105 IVDKLGVEKYDIVTTNPPYM 124 >gi|83749844|ref|ZP_00946813.1| Methyltransferase [Ralstonia solanacearum UW551] gi|207744704|ref|YP_002261096.1| hypothetical protein 1177; methyltransferase small [Ralstonia solanacearum IPO1609] gi|83723481|gb|EAP70690.1| Methyltransferase [Ralstonia solanacearum UW551] gi|206596111|emb|CAQ63038.1| conserved hypothetical protein 1177; methyltransferase small [Ralstonia solanacearum IPO1609] Length = 342 Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 36/104 (34%), Positives = 55/104 (52%), Gaps = 4/104 (3%) Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162 D+GTGTG V A+L + VG D +AL A+ N G+ R + +++D F E Sbjct: 169 DIGTGTG-VLAAVLAKRGVKHVVGTDQDARALVCARENLARLGLQSRVEVIEADLFP--E 225 Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206 G +IV NPP++ + + V D D R+ L G +DGL+ + Sbjct: 226 GRAPLIVCNPPWLPARPSSPIERAVYDPDSRM-LRGFLDGLAAH 268 >gi|306825048|ref|ZP_07458390.1| methyltransferase domain protein [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|304432484|gb|EFM35458.1| methyltransferase domain protein [Streptococcus sp. oral taxon 071 str. 73H25AP] Length = 196 Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 29/73 (39%), Positives = 44/73 (60%), Gaps = 3/73 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LD+G G G + L+L K + + VDI+ +AL++A+ NA N V QS+ + Sbjct: 61 VLDVGCGYGPLGLSLTK-AYGVQATMVDINNRALDLARQNAERNKVEATI--FQSNIYEQ 117 Query: 161 VEGLFDVIVSNPP 173 VEG FD ++SNPP Sbjct: 118 VEGKFDHVISNPP 130 >gi|332798043|ref|YP_004459542.1| methyltransferase small [Tepidanaerobacter sp. Re1] gi|332695778|gb|AEE90235.1| methyltransferase small [Tepidanaerobacter sp. Re1] Length = 251 Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 31/98 (31%), Positives = 54/98 (55%), Gaps = 6/98 (6%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 +DS L + + +K D R++D+GTG+G + L L ++ + VG++I +A + A N Sbjct: 33 IDSVLLANFIKADKND--RVIDIGTGSGVIALLLSAKTDAKEIVGIEIVGEAFDRAVRNV 90 Query: 142 VTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPYI 175 N + ER + D +V+ F V+V+NPPY+ Sbjct: 91 KMNRLEERVKIVHGDLKEAVKIFGRESFSVVVTNPPYM 128 >gi|253687014|ref|YP_003016204.1| rRNA (guanine-N(2)-)-methyltransferase [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251753592|gb|ACT11668.1| rRNA (guanine-N(2)-)-methyltransferase [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 348 Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 25/75 (33%), Positives = 43/75 (57%), Gaps = 2/75 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LD+ G G + L K+SP + D+S A+E +K+ N + + + S+ +S Sbjct: 199 KVLDIACGAGVLASVLAKQSPKIRLTLSDVSAAAVESSKATLTANALEG--EVIASNVYS 256 Query: 160 SVEGLFDVIVSNPPY 174 + G FD+IVSNPP+ Sbjct: 257 DINGRFDMIVSNPPF 271 >gi|195978059|ref|YP_002123303.1| 16S rRNA m(2)G 1207 methyltransferase [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|225868610|ref|YP_002744558.1| methyltransferase [Streptococcus equi subsp. zooepidemicus] gi|225870431|ref|YP_002746378.1| methyltransferase [Streptococcus equi subsp. equi 4047] gi|195974764|gb|ACG62290.1| 16S rRNA m(2)G 1207 methyltransferase [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|225699835|emb|CAW93681.1| putative methyltransferase [Streptococcus equi subsp. equi 4047] gi|225701886|emb|CAW99374.1| putative methyltransferase [Streptococcus equi subsp. zooepidemicus] Length = 209 Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 30/74 (40%), Positives = 44/74 (59%), Gaps = 3/74 (4%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+LDLG G G + L+L K + + VDI+ +A+ +AK NA +N V QS+ + Sbjct: 71 RLLDLGCGYGPLGLSLAK-AQGVEATLVDINHRAVGLAKQNAESNQVEATI--FQSNLYD 127 Query: 160 SVEGLFDVIVSNPP 173 V G F+ I+SNPP Sbjct: 128 GVTGTFEHIISNPP 141 >gi|238758556|ref|ZP_04619732.1| Ribosomal RNA small subunit methyltransferase C [Yersinia aldovae ATCC 35236] gi|238703256|gb|EEP95797.1| Ribosomal RNA small subunit methyltransferase C [Yersinia aldovae ATCC 35236] Length = 347 Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 23/87 (26%), Positives = 48/87 (55%), Gaps = 2/87 (2%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LD+G G G + L ++SP K D+S A+E +++ N + + + S+ ++ Sbjct: 200 VLDVGCGAGVLASVLAQQSPKIKWTLSDVSAAAIEASRATLAANNIDAQ--VIASNVYTD 257 Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEV 187 ++G F++I+SNPP+ + + E+ Sbjct: 258 IKGRFEMIISNPPFHDGIQTSLTAAEM 284 >gi|227549121|ref|ZP_03979170.1| methyltransferase small [Corynebacterium lipophiloflavum DSM 44291] gi|227078818|gb|EEI16781.1| methyltransferase small [Corynebacterium lipophiloflavum DSM 44291] Length = 518 Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 30/79 (37%), Positives = 45/79 (56%), Gaps = 4/79 (5%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 V R+LDLGTG+G +A + S + V D+ +ALE+A++ N V + + W Sbjct: 162 VERVLDLGTGSGVQAIA--QSSCAVEVVATDVHPRALELAEATLAANAV-RNVELREGSW 218 Query: 158 FSSVEG-LFDVIVSNPPYI 175 F V G FD IV+NPP++ Sbjct: 219 FEPVAGERFDRIVANPPFV 237 >gi|160935001|ref|ZP_02082387.1| hypothetical protein CLOLEP_03877 [Clostridium leptum DSM 753] gi|156866454|gb|EDO59826.1| hypothetical protein CLOLEP_03877 [Clostridium leptum DSM 753] Length = 306 Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 50/185 (27%), Positives = 84/185 (45%), Gaps = 44/185 (23%) Query: 54 ILGWRDFYN---------VRLTLSSDTFEPRPETELLVDSALAFS----------LPRIE 94 I W+ +++ +R T + ++P+ T L ++ LAF L +E Sbjct: 106 INNWKQYFHPIPVGEKLLIRPTWE-EAYDPQGRTVLHLEPGLAFGTGTHETTRLCLELLE 164 Query: 95 K--RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152 K + + +LD+G G+G + +A L K VGVDI A++ A NA TNGV E+F Sbjct: 165 KYLKPGMSLLDVGCGSGILSVAGLLLGAE-KAVGVDIDALAVKTAGENAQTNGVEEKFQG 223 Query: 153 LQSDWFSSVEGLFDVIVSN--------------------PPYIESVIVDCLGLEVRD-FD 191 + + V G ++++V+N Y+ S I+D EVRD + Sbjct: 224 ICGNLTDQVAGKYELVVANIVADIIILLTKDITRYLNPDSIYLMSGIIDTRVQEVRDALE 283 Query: 192 PRISL 196 PR ++ Sbjct: 284 PRFTI 288 >gi|188532753|ref|YP_001906550.1| 16S ribosomal RNA m2G1207 methyltransferase [Erwinia tasmaniensis Et1/99] gi|226712953|sp|B2VH94|RSMC_ERWT9 RecName: Full=Ribosomal RNA small subunit methyltransferase C; AltName: Full=16S rRNA m2G1207 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rsmC gi|188027795|emb|CAO95652.1| Ribosomal RNA small subunit methyltransferase C [Erwinia tasmaniensis Et1/99] Length = 342 Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 56/213 (26%), Positives = 88/213 (41%), Gaps = 53/213 (24%) Query: 64 RLTLSSDTF-EPRPETELLVDSALAFSLPRIEKRDVV-----------------RILDLG 105 R T +DTF + P EL V + LP + RD + ++LD+G Sbjct: 150 RPTFDADTFWDEYPLGELTVKT-----LPGVFSRDGLDIGSQLLLSTLKPHMKGKVLDVG 204 Query: 106 TGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF 165 G G + L SP + D++ A+ +K+ N + D S+ +S + G F Sbjct: 205 CGAGVLSAMLASFSPKVRLTLTDVNAAAIASSKATLAANQLEG--DVFASNVYSDISGRF 262 Query: 166 DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG---- 221 D+I+SNPP+ + V + SLD +T+ G HLN G Sbjct: 263 DMIISNPPFHDGV--------------QTSLDAA-------QTLIRGAVSHLNTGGELRI 301 Query: 222 LCSVEIGYNQKVDVVRIFESRKLFLVNA-FKDY 253 + + + Y Q +D F S ++ L N FK Y Sbjct: 302 VANAFLPYPQVLD--ETFGSHEVLLQNGRFKVY 332 >gi|323335826|gb|EGA77105.1| Mtq1p [Saccharomyces cerevisiae Vin13] Length = 314 Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 44/168 (26%), Positives = 76/168 (45%), Gaps = 7/168 (4%) Query: 41 AIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL-AFSLPRIEKRDV- 98 A ++ KH + IL + F + + PR ETE V + + A + + + + Sbjct: 52 ACLQRYKHVPLQYILRSQPFGALDIVCKPGVLIPRWETEEWVMAIIRALNNSMLSRHTIP 111 Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE----RFDTLQ 154 + I D TGTG + LAL +D+S +A+ + K N + N VS + + L Sbjct: 112 LHICDTFTGTGCIALALSHGIANCTFTAIDVSTRAIXLVKENMLKNKVSGGKLVQHNILS 171 Query: 155 SDWFSSVEGLFDVIVSNPPYIESVIVDC-LGLEVRDFDPRISLDGGID 201 S D++ NPPYI + + V+ F+PR++L G ++ Sbjct: 172 SKASDEYPSHIDILTGNPPYIRKRDFNRDVKTSVKLFEPRLALVGELE 219 >gi|15902787|ref|NP_358337.1| hypothetical protein spr0743 [Streptococcus pneumoniae R6] gi|116516099|ref|YP_816227.1| methyltransferase small subunit [Streptococcus pneumoniae D39] gi|15458336|gb|AAK99547.1| Conserved hypothetical protein [Streptococcus pneumoniae R6] gi|116076675|gb|ABJ54395.1| methyltransferase small domain, putative [Streptococcus pneumoniae D39] Length = 196 Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 28/73 (38%), Positives = 44/73 (60%), Gaps = 3/73 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LD+G G G + L+L K + + VDI+ +AL++A+ NA N + QS+ + Sbjct: 61 VLDVGCGYGPLGLSLAK-AYGVQATMVDINTRALDLARRNAEKNNA--KATIFQSNIYEQ 117 Query: 161 VEGLFDVIVSNPP 173 VEG FD ++SNPP Sbjct: 118 VEGHFDHVISNPP 130 >gi|311748643|ref|ZP_07722428.1| putative transferase [Algoriphagus sp. PR1] gi|126577169|gb|EAZ81417.1| putative transferase [Algoriphagus sp. PR1] Length = 236 Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 45/142 (31%), Positives = 67/142 (47%), Gaps = 10/142 (7%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 RILD+GTGTG + L L + V++ KA E AKSN + S R + ++ S Sbjct: 40 RILDVGTGTGVIALMLAQRYRESFLTAVELDEKAAEQAKSNFKESPFSNRMKLWKGEFQS 99 Query: 160 -SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 + FD+IVSNPPY L+ +D +L D LS ++ + S + Sbjct: 100 YQSDEKFDMIVSNPPYFPD------HLKAKDSQRNQALH--TDALS-FKDLVSKASSLIT 150 Query: 219 KDGLCSVEIGYNQKVDVVRIFE 240 +DG V + Q D ++I E Sbjct: 151 EDGNFWVILPPRQMQDFIQITE 172 >gi|255532860|ref|YP_003093232.1| methyltransferase small [Pedobacter heparinus DSM 2366] gi|262828558|sp|C6Y2G0|TRMN6_PEDHD RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName: Full=tRNA m6A37 methyltransferase gi|255345844|gb|ACU05170.1| methyltransferase small [Pedobacter heparinus DSM 2366] Length = 234 Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 32/83 (38%), Positives = 42/83 (50%), Gaps = 5/83 (6%) Query: 95 KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154 K + ILD+GTGTG + L L + P V+I +A A NA+ S R L Sbjct: 34 KNEAANILDIGTGTGVIALMLAQRFPNALVDAVEIDEQAALTATKNALNAPFSGRLKVLH 93 Query: 155 S---DWFSSVEGLFDVIVSNPPY 174 S D+ E +D+IVSNPPY Sbjct: 94 SAIEDYLP--EKYYDLIVSNPPY 114 >gi|156973272|ref|YP_001444179.1| hypothetical protein VIBHAR_00953 [Vibrio harveyi ATCC BAA-1116] gi|262828794|sp|A7MXM2|TRMN6_VIBHB RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName: Full=tRNA m6A37 methyltransferase gi|156524866|gb|ABU69952.1| hypothetical protein VIBHAR_00953 [Vibrio harveyi ATCC BAA-1116] Length = 239 Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 29/79 (36%), Positives = 40/79 (50%), Gaps = 1/79 (1%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 +ILD+GTGTG + L + P + +DI A+E AK N + S+R SD Sbjct: 45 KILDIGTGTGLLALMCAQRFPSAQITALDIEITAIEAAKQNFAQSTWSDRLSLHHSDVLQ 104 Query: 160 -SVEGLFDVIVSNPPYIES 177 E F+ I+ NPPY S Sbjct: 105 FEPEHRFERIICNPPYFNS 123 >gi|255102757|ref|ZP_05331734.1| hypothetical protein CdifQCD-6_18241 [Clostridium difficile QCD-63q42] Length = 248 Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 30/98 (30%), Positives = 54/98 (55%), Gaps = 6/98 (6%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 +D+ L + +I+K +++DLGTGTG + + + +S K +GV+I E+A + Sbjct: 30 IDAVLLANFTKIKKD--AKVVDLGTGTGIIPILIAGKSEAKKIIGVEIQEDVYEMATRSI 87 Query: 142 VTNGVSERFDTLQSD--WFSSVEGL--FDVIVSNPPYI 175 NG+ ER + + D + V + + V+ SNPPY+ Sbjct: 88 KLNGLEERVEIINEDIKYIDKVLDINGYHVVTSNPPYM 125 >gi|148986069|ref|ZP_01819090.1| pantothenate kinase [Streptococcus pneumoniae SP3-BS71] gi|148992507|ref|ZP_01822202.1| pantothenate kinase [Streptococcus pneumoniae SP9-BS68] gi|149004045|ref|ZP_01828851.1| pantothenate kinase [Streptococcus pneumoniae SP14-BS69] gi|149021705|ref|ZP_01835736.1| pantothenate kinase [Streptococcus pneumoniae SP23-BS72] gi|147757946|gb|EDK64954.1| pantothenate kinase [Streptococcus pneumoniae SP14-BS69] gi|147921903|gb|EDK73029.1| pantothenate kinase [Streptococcus pneumoniae SP3-BS71] gi|147928824|gb|EDK79837.1| pantothenate kinase [Streptococcus pneumoniae SP9-BS68] gi|147930166|gb|EDK81152.1| pantothenate kinase [Streptococcus pneumoniae SP23-BS72] Length = 196 Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 28/73 (38%), Positives = 45/73 (61%), Gaps = 3/73 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LD+G G G + L+L K + + VDI+ +AL++A+ NA N + + QS+ + Sbjct: 61 VLDVGCGYGPLGLSLAK-AYGVQATMVDINTRALDLARRNAEKN--NAKATIFQSNIYEQ 117 Query: 161 VEGLFDVIVSNPP 173 VEG FD ++SNPP Sbjct: 118 VEGHFDHVISNPP 130 >gi|322375416|ref|ZP_08049929.1| methyltransferase domain protein [Streptococcus sp. C300] gi|321279679|gb|EFX56719.1| methyltransferase domain protein [Streptococcus sp. C300] Length = 196 Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 29/73 (39%), Positives = 44/73 (60%), Gaps = 3/73 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LD+G G G + L+L K + + VDI+ +AL++A+ NA N V QS+ + Sbjct: 61 VLDVGCGYGPLGLSLAK-AYGAQATMVDINNRALDLAQQNAERNKVEATI--FQSNIYEQ 117 Query: 161 VEGLFDVIVSNPP 173 VEG FD ++SNPP Sbjct: 118 VEGKFDHVISNPP 130 >gi|291520312|emb|CBK75533.1| Predicted O-methyltransferase [Butyrivibrio fibrisolvens 16/4] Length = 250 Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 28/98 (28%), Positives = 56/98 (57%), Gaps = 6/98 (6%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 +D+ L S ++++ +V LDLGTGTG + + L ++ G++I ++ E+A + Sbjct: 32 MDAVLLSSFAKVKEGEVA--LDLGTGTGILPILLEAKTGGAHFTGLEIQPESAEMANRSV 89 Query: 142 VTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYI 175 + NG+ ++ D ++ D + + G +V+ SNPPY+ Sbjct: 90 LLNGLEDKIDIIEGDIKEAAQIFGKGSMNVVTSNPPYM 127 >gi|126660340|ref|ZP_01731453.1| hypothetical protein CY0110_12047 [Cyanothece sp. CCY0110] gi|126618371|gb|EAZ89127.1| hypothetical protein CY0110_12047 [Cyanothece sp. CCY0110] Length = 401 Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 35/91 (38%), Positives = 47/91 (51%), Gaps = 6/91 (6%) Query: 84 SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143 +A F R R+ +RILD G GTG L+ +P + VGVDIS KALEIA+ Sbjct: 41 AAYNFCTGRKPPRENIRILDAGCGTGVGTEYLILLNPHAEIVGVDISEKALEIAEKRCQQ 100 Query: 144 NGVSER------FDTLQSDWFSSVEGLFDVI 168 +GV+ F L + +EG FD+I Sbjct: 101 SGVATNHNYPISFHHLPLEEAEKIEGEFDLI 131 >gi|67590136|ref|XP_665463.1| hypothetical protein [Cryptosporidium hominis TU502] gi|54656165|gb|EAL35233.1| hypothetical protein Chro.40428 [Cryptosporidium hominis] Length = 254 Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 40/144 (27%), Positives = 69/144 (47%), Gaps = 12/144 (8%) Query: 70 DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK-------ESPFF 122 + +EP E L++ AL I K I ++G G+G + LLK E P Sbjct: 14 NVYEPS-EDSFLMEDALILEKNEILKVKPRLICEIGCGSGYLTACLLKIIKESDAEFPLP 72 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVI 179 VD++ KALE+++ N ++ + ++ F+ + GLF++I+ NPPY+ S Sbjct: 73 ISYLVDVNTKALEMSEKVISNNKINSPIELIKMSLFTCLNRNRGLFEIIIFNPPYVPSSN 132 Query: 180 VDCLGLEVRDFDPRISLDGGIDGL 203 D L + + + GG++GL Sbjct: 133 KD-LNQSILNCGIDSAWSGGVNGL 155 >gi|270296757|ref|ZP_06202956.1| conserved hypothetical protein [Bacteroides sp. D20] gi|317480115|ref|ZP_07939225.1| methyltransferase domain-containing protein [Bacteroides sp. 4_1_36] gi|270272744|gb|EFA18607.1| conserved hypothetical protein [Bacteroides sp. D20] gi|316903662|gb|EFV25506.1| methyltransferase domain-containing protein [Bacteroides sp. 4_1_36] Length = 235 Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 28/76 (36%), Positives = 42/76 (55%), Gaps = 1/76 (1%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 RILD+GTGTG + L L + +P + ++I A A N + ++R + + D+ Sbjct: 40 RILDVGTGTGLIALQLAQRNPHARITAIEIDAAAAGQATENVSHSPWADRVEIICHDFRD 99 Query: 160 -SVEGLFDVIVSNPPY 174 E FD+IVSNPPY Sbjct: 100 YQPENRFDLIVSNPPY 115 >gi|237723643|ref|ZP_04554124.1| conserved hypothetical protein [Bacteroides sp. D4] gi|229437991|gb|EEO48068.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4] Length = 234 Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 44/133 (33%), Positives = 65/133 (48%), Gaps = 11/133 (8%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159 ILD+GTGTG + L ++ + + VDI A+E A+ N + +R + LQ Sbjct: 41 ILDVGTGTGLISL-MMAQRCNAQIRAVDIDADAVEQARGNVAASPWQDRIEVELQDICHF 99 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 + E LFDVIVSNPPY D L R + D L + +A+ +R L+ Sbjct: 100 TSETLFDVIVSNPPY----FTDSLKCPERQRNIARHTD-----LLDFAKLAESAARLLHS 150 Query: 220 DGLCSVEIGYNQK 232 +G+ SV I + K Sbjct: 151 EGVFSVIIPADGK 163 >gi|237744391|ref|ZP_04574872.1| methyltransferase [Fusobacterium sp. 7_1] gi|229431620|gb|EEO41832.1| methyltransferase [Fusobacterium sp. 7_1] Length = 243 Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 37/119 (31%), Positives = 62/119 (52%), Gaps = 12/119 (10%) Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 N+++ SD F +DS L +I+K + +ILDLGTG A+ L L K++ Sbjct: 15 NLKIVQRSDYFN------FSIDSLLISEFIKIQK-NTKKILDLGTGNAAIPLFLSKKTSA 67 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSER----FDTLQSDWFSSVEGLFDVIVSNPPYIE 176 K G++I + ++A N N + E+ +D +++ G FD+IVSNPP+ + Sbjct: 68 -KIYGIEIQEVSYKLALRNININNLDEQIYIIYDNMKNYLKYFNMGFFDIIVSNPPFFK 125 >gi|322411856|gb|EFY02764.1| 16S rRNA m(2)G 1207 methyltransferase [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 210 Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 30/74 (40%), Positives = 45/74 (60%), Gaps = 3/74 (4%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 RILDLG G G + ++L K + VDI+ +A+++AK NA N V+ QS+ + Sbjct: 71 RILDLGCGYGPLGISLAKVQDV-EATLVDINNRAIDLAKKNARQNQVN--VTIFQSNIYE 127 Query: 160 SVEGLFDVIVSNPP 173 +V G F+ I+SNPP Sbjct: 128 NVRGSFNHIISNPP 141 >gi|301155995|emb|CBW15465.1| 16S rRNA m2G1207 methylase [Haemophilus parainfluenzae T3T1] Length = 330 Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 2/79 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LD+G G G + + K P DI A++ A+ N + R + SD FS Sbjct: 193 KVLDVGCGAGVIGSMIKKHHPKADVTMTDIHAMAIQSARQTLAENQLEGR--VIASDVFS 250 Query: 160 SVEGLFDVIVSNPPYIESV 178 +EG FD+I+SNPP+ + V Sbjct: 251 HIEGKFDLIISNPPFHDGV 269 >gi|253744678|gb|EET00845.1| DNA methyltransferase [Giardia intestinalis ATCC 50581] Length = 228 Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 48/174 (27%), Positives = 78/174 (44%), Gaps = 24/174 (13%) Query: 61 YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120 Y L + P +T LL+D+ S ++ + V I G+G+G V + + + P Sbjct: 5 YKATLDDCKHVYLPDEDTFLLIDTLTKLS-KELQPQSFVEI---GSGSGVVSVHIFQVFP 60 Query: 121 -FFKGVGVDISCKALEIAKSNAVTNGVS---------ERFDTLQSDWFSSVEGLFDVIVS 170 +G +DIS A+++ + A N V E DT ++D+ + FD+IV Sbjct: 61 KILEGHAIDISPYAVDMTRRTAALNNVPLLVHEGSFFEPLDT-RTDYPETAR--FDLIVF 117 Query: 171 NPPYIESVIVDCLGLEVRDFDP-RISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223 NPPY+ S+ D D P ++L GG +G + + HL DG C Sbjct: 118 NPPYVPSLETD------PDLGPLDLALAGGKNGSEIILQFLETLPSHLAVDGCC 165 >gi|227329779|ref|ZP_03833803.1| 16S ribosomal RNA m2G1207 methyltransferase [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 349 Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 25/75 (33%), Positives = 43/75 (57%), Gaps = 2/75 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LD+ G G + L K+SP + D+S A+E +K+ N + + S+ +S Sbjct: 199 KVLDIACGAGVLASVLAKQSPKIRLTLSDVSAAAVESSKATLAANALEG--SVIASNVYS 256 Query: 160 SVEGLFDVIVSNPPY 174 ++G FD+IVSNPP+ Sbjct: 257 DIDGRFDMIVSNPPF 271 >gi|307731153|ref|YP_003908377.1| methyltransferase small [Burkholderia sp. CCGE1003] gi|307585688|gb|ADN59086.1| methyltransferase small [Burkholderia sp. CCGE1003] Length = 375 Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 36/107 (33%), Positives = 56/107 (52%), Gaps = 4/107 (3%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 + D+GTGTG V ALL + K V D +AL A+ N G ++ D +Q+D F Sbjct: 198 KAFDVGTGTG-VLAALLAKRGVKKIVATDQDPRALACARENLARLGYGQQVDVVQADLFP 256 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206 EG ++V NPP++ + + V D D R+ L G ++GL+ + Sbjct: 257 --EGRAPLVVCNPPWVPARPASPIEHAVFDPDSRMLL-GFLNGLADH 300 >gi|260578867|ref|ZP_05846773.1| transferase [Corynebacterium jeikeium ATCC 43734] gi|258603014|gb|EEW16285.1| transferase [Corynebacterium jeikeium ATCC 43734] Length = 469 Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 45/145 (31%), Positives = 67/145 (46%), Gaps = 19/145 (13%) Query: 99 VRILDLGTGTG--AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV-SERFDTLQS 155 R+LDLGTG+G A+ LA E K G DI +AL A+ A G+ S + +Q Sbjct: 85 ARVLDLGTGSGVLALVLAANAEVEPPKIFGSDIHARALNYARVAAAAQGLDSPLVNWVQG 144 Query: 156 DWF-----------SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204 WF S+ FDVIV+NPP++ VD LE + + D G+ + Sbjct: 145 SWFEPFSAESADTESTEAQRFDVIVANPPFVIGPSVD---LEAEEG--HVYRDSGLPLDA 199 Query: 205 HYRTIADGVSRHLNKDGLCSVEIGY 229 + + + +HL G + IG+ Sbjct: 200 ASQLVVEQSVQHLAPGGHAHLLIGW 224 >gi|149010531|ref|ZP_01831902.1| methyltransferase small domain, putative [Streptococcus pneumoniae SP19-BS75] gi|147765012|gb|EDK71941.1| methyltransferase small domain, putative [Streptococcus pneumoniae SP19-BS75] Length = 196 Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 28/73 (38%), Positives = 45/73 (61%), Gaps = 3/73 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LD+G G G + L+L K + + VDI+ +AL++A+ NA N + + QS+ + Sbjct: 61 VLDVGCGYGPLGLSLAK-AYGVQATMVDINTRALDLARRNAEKN--NAKATIFQSNIYEQ 117 Query: 161 VEGLFDVIVSNPP 173 VEG FD ++SNPP Sbjct: 118 VEGHFDHVISNPP 130 >gi|260494056|ref|ZP_05814187.1| methyltransferase [Fusobacterium sp. 3_1_33] gi|260198202|gb|EEW95718.1| methyltransferase [Fusobacterium sp. 3_1_33] Length = 243 Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 37/119 (31%), Positives = 62/119 (52%), Gaps = 12/119 (10%) Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 N+++ SD F +DS L +I+K + +ILDLGTG A+ L L K++ Sbjct: 15 NLKIVQRSDYFN------FSIDSLLISEFIKIQK-NTKKILDLGTGNAAIPLFLSKKTSA 67 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSER----FDTLQSDWFSSVEGLFDVIVSNPPYIE 176 K G++I + ++A N N + E+ +D +++ G FD+IVSNPP+ + Sbjct: 68 -KIYGIEIQEVSYKLALRNININNLDEQIYIIYDNMKNYLKYFNMGFFDIIVSNPPFFK 125 >gi|330686234|gb|EGG97846.1| methyltransferase small domain protein [Staphylococcus epidermidis VCU121] Length = 202 Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 32/97 (32%), Positives = 52/97 (53%), Gaps = 6/97 (6%) Query: 78 TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137 ++LL+ + L + P K I D+G G G + L + K SP +D++ +ALE+A Sbjct: 45 SDLLIQTFLKANPPGPSKT----IADVGCGYGPIGLMIAKVSPHHHITMLDVNRRALELA 100 Query: 138 KSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPP 173 K N N + E D +SD + V+ FD +++NPP Sbjct: 101 KKNKKKNHI-ENADIFESDGMTQVDNNQFDFVLTNPP 136 >gi|307127610|ref|YP_003879641.1| methyltransferase small domain superfamily [Streptococcus pneumoniae 670-6B] gi|301801668|emb|CBW34371.1| putative methyltransferase [Streptococcus pneumoniae INV200] gi|306484672|gb|ADM91541.1| methyltransferase small domain superfamily [Streptococcus pneumoniae 670-6B] gi|332077252|gb|EGI87714.1| methyltransferase small domain protein [Streptococcus pneumoniae GA17545] Length = 193 Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 28/73 (38%), Positives = 45/73 (61%), Gaps = 3/73 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LD+G G G + L+L K + + VDI+ +AL++A+ NA N + + QS+ + Sbjct: 58 VLDVGCGYGPLGLSLAK-AYGVQATMVDINTRALDLARRNAEKN--NAKATIFQSNIYEQ 114 Query: 161 VEGLFDVIVSNPP 173 VEG FD ++SNPP Sbjct: 115 VEGHFDHVISNPP 127 >gi|254977171|ref|ZP_05273643.1| hypothetical protein CdifQC_17743 [Clostridium difficile QCD-66c26] gi|255094501|ref|ZP_05323979.1| hypothetical protein CdifC_17856 [Clostridium difficile CIP 107932] gi|255316252|ref|ZP_05357835.1| hypothetical protein CdifQCD-7_17939 [Clostridium difficile QCD-76w55] gi|255518913|ref|ZP_05386589.1| hypothetical protein CdifQCD-_17478 [Clostridium difficile QCD-97b34] gi|255652092|ref|ZP_05398994.1| hypothetical protein CdifQCD_18040 [Clostridium difficile QCD-37x79] gi|260685065|ref|YP_003216350.1| hypothetical protein CD196_3336 [Clostridium difficile CD196] gi|260688723|ref|YP_003219857.1| hypothetical protein CDR20291_3382 [Clostridium difficile R20291] gi|306521826|ref|ZP_07408173.1| hypothetical protein CdifQ_20455 [Clostridium difficile QCD-32g58] gi|260211228|emb|CBA66742.1| conserved hypothetical protein [Clostridium difficile CD196] gi|260214740|emb|CBE07425.1| conserved hypothetical protein [Clostridium difficile R20291] Length = 248 Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 30/98 (30%), Positives = 54/98 (55%), Gaps = 6/98 (6%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 +D+ L + +I+K +++DLGTGTG + + + +S K +GV+I E+A + Sbjct: 30 IDAVLLANFTKIKKD--AKVVDLGTGTGIIPILIAGKSEAKKIIGVEIQEDVYEMATRSI 87 Query: 142 VTNGVSERFDTLQSD--WFSSVEGL--FDVIVSNPPYI 175 NG+ ER + + D + V + + V+ SNPPY+ Sbjct: 88 KLNGLEERVEIINEDIKYIDKVLDINGYHVVTSNPPYM 125 >gi|315222903|ref|ZP_07864782.1| methyltransferase small domain protein [Streptococcus anginosus F0211] gi|315187853|gb|EFU21589.1| methyltransferase small domain protein [Streptococcus anginosus F0211] Length = 197 Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 30/73 (41%), Positives = 43/73 (58%), Gaps = 3/73 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LD+G G G + L L+K K VDI+ +AL++A+ NA N V QS+ + + Sbjct: 61 VLDVGCGYGTLGLTLIKAKEV-KATLVDINQRALDLARQNADRNQVLATI--FQSNIYQN 117 Query: 161 VEGLFDVIVSNPP 173 VEG F I+SNPP Sbjct: 118 VEGRFHHIISNPP 130 >gi|311741861|ref|ZP_07715672.1| methyltransferase [Aeromicrobium marinum DSM 15272] gi|311314867|gb|EFQ84773.1| methyltransferase [Aeromicrobium marinum DSM 15272] Length = 212 Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 42/142 (29%), Positives = 72/142 (50%), Gaps = 15/142 (10%) Query: 101 ILDLGTGTGAVCLALLKESPFFKG---VGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 +L+L G G + LA + +G V V+I A + A NA T G+S+ + + Sbjct: 50 MLELFAGVGHIGLAAARR----RGRILVQVEIDRWAAQFAHLNAETAGLSDLVEVRCAPV 105 Query: 158 FSSV--EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215 S++ + F +I+++PP++++ +V DPR+ +DGG DGL R + + Sbjct: 106 ESALAPDEAFPLILADPPWVDAELV-----HQYPADPRLCIDGGADGLQLVRAALEVIGA 160 Query: 216 HLNKDGLCSVEIGYNQKVDVVR 237 HL GL +++G Q V VR Sbjct: 161 HLVTSGLAVLQVGPTQ-VPAVR 181 >gi|225858641|ref|YP_002740151.1| methyltransferase small domain superfamily [Streptococcus pneumoniae 70585] gi|225721043|gb|ACO16897.1| methyltransferase small domain superfamily [Streptococcus pneumoniae 70585] Length = 193 Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 28/73 (38%), Positives = 45/73 (61%), Gaps = 3/73 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LD+G G G + L+L K + + VDI+ +AL++A+ NA N + + QS+ + Sbjct: 58 VLDVGCGYGPLGLSLAK-AYGVQATMVDINTRALDLARRNAEKN--NAKATIFQSNIYEQ 114 Query: 161 VEGLFDVIVSNPP 173 VEG FD ++SNPP Sbjct: 115 VEGHFDHVISNPP 127 >gi|126701171|ref|YP_001090068.1| hypothetical protein CD3547 [Clostridium difficile 630] gi|255308578|ref|ZP_05352749.1| hypothetical protein CdifA_18451 [Clostridium difficile ATCC 43255] gi|115252608|emb|CAJ70451.1| putative methyltransferase [Clostridium difficile] Length = 248 Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 30/98 (30%), Positives = 54/98 (55%), Gaps = 6/98 (6%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 +D+ L + +I+K +++DLGTGTG + + + +S K +GV+I E+A + Sbjct: 30 IDAVLLANFTKIKKD--AKVVDLGTGTGIIPILIAGKSEAKKIIGVEIQEDVYEMATRSI 87 Query: 142 VTNGVSERFDTLQSD--WFSSVEGL--FDVIVSNPPYI 175 NG+ ER + + D + V + + V+ SNPPY+ Sbjct: 88 KLNGLEERVEIINEDIKYIDKVLDINGYHVVTSNPPYM 125 >gi|183603300|ref|ZP_02713985.2| methyltransferase small domain superfamily [Streptococcus pneumoniae SP195] gi|225856507|ref|YP_002738018.1| methyltransferase small domain superfamily [Streptococcus pneumoniae P1031] gi|237650831|ref|ZP_04525083.1| methyltransferase small domain superfamily protein [Streptococcus pneumoniae CCRI 1974] gi|183571845|gb|EDT92373.1| methyltransferase small domain superfamily [Streptococcus pneumoniae SP195] gi|225724345|gb|ACO20197.1| methyltransferase small domain superfamily [Streptococcus pneumoniae P1031] gi|301799838|emb|CBW32410.1| putative methyltransferase [Streptococcus pneumoniae OXC141] gi|332073168|gb|EGI83647.1| methyltransferase small domain protein [Streptococcus pneumoniae GA17570] gi|332076119|gb|EGI86585.1| methyltransferase small domain protein [Streptococcus pneumoniae GA41301] Length = 193 Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 28/73 (38%), Positives = 45/73 (61%), Gaps = 3/73 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LD+G G G + L+L K + + VDI+ +AL++A+ NA N + + QS+ + Sbjct: 58 VLDVGCGYGPLGLSLAK-AYGVQATMVDINTRALDLARRNAEKN--NAKATIFQSNIYEQ 114 Query: 161 VEGLFDVIVSNPP 173 VEG FD ++SNPP Sbjct: 115 VEGHFDHVISNPP 127 >gi|182683753|ref|YP_001835500.1| hypothetical protein SPCG_0783 [Streptococcus pneumoniae CGSP14] gi|303254023|ref|ZP_07340141.1| hypothetical protein CGSSpBS455_01006 [Streptococcus pneumoniae BS455] gi|303260303|ref|ZP_07346274.1| hypothetical protein CGSSp9vBS293_03683 [Streptococcus pneumoniae SP-BS293] gi|303261509|ref|ZP_07347457.1| hypothetical protein CGSSp14BS292_09260 [Streptococcus pneumoniae SP14-BS292] gi|303264177|ref|ZP_07350098.1| hypothetical protein CGSSpBS397_06242 [Streptococcus pneumoniae BS397] gi|303267043|ref|ZP_07352915.1| hypothetical protein CGSSpBS457_00275 [Streptococcus pneumoniae BS457] gi|303269195|ref|ZP_07354972.1| hypothetical protein CGSSpBS458_02909 [Streptococcus pneumoniae BS458] gi|182629087|gb|ACB90035.1| hypothetical protein SPCG_0783 [Streptococcus pneumoniae CGSP14] gi|302599003|gb|EFL66031.1| hypothetical protein CGSSpBS455_01006 [Streptococcus pneumoniae BS455] gi|302637643|gb|EFL68130.1| hypothetical protein CGSSp14BS292_09260 [Streptococcus pneumoniae SP14-BS292] gi|302638627|gb|EFL69091.1| hypothetical protein CGSSpBS293_03683 [Streptococcus pneumoniae SP-BS293] gi|302641259|gb|EFL71629.1| hypothetical protein CGSSpBS458_02909 [Streptococcus pneumoniae BS458] gi|302643437|gb|EFL73712.1| hypothetical protein CGSSpBS457_00275 [Streptococcus pneumoniae BS457] gi|302646582|gb|EFL76808.1| hypothetical protein CGSSpBS397_06242 [Streptococcus pneumoniae BS397] Length = 196 Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 28/73 (38%), Positives = 45/73 (61%), Gaps = 3/73 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LD+G G G + L+L K + + VDI+ +AL++A+ NA N + + QS+ + Sbjct: 61 VLDVGCGYGPLGLSLAK-AYGVQATMVDINTRALDLARRNAEKN--NAKATIFQSNIYEQ 117 Query: 161 VEGLFDVIVSNPP 173 VEG FD ++SNPP Sbjct: 118 VEGHFDHVISNPP 130 >gi|315613342|ref|ZP_07888251.1| methyltransferase domain protein [Streptococcus sanguinis ATCC 49296] gi|315314577|gb|EFU62620.1| methyltransferase domain protein [Streptococcus sanguinis ATCC 49296] Length = 196 Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 32/96 (33%), Positives = 52/96 (54%), Gaps = 3/96 (3%) Query: 78 TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137 ++ +VD L +E +LD+G G G + L+L K + + VDI+ +AL++A Sbjct: 38 SKKMVDFGSQLLLKCLEVNKGETVLDVGCGYGPLGLSLAK-AYGVQATMVDINNRALDLA 96 Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173 + NA N + QS+ + VEG FD ++SNPP Sbjct: 97 RQNAERNKIEATI--FQSNIYEQVEGKFDHVISNPP 130 >gi|330923634|ref|XP_003300318.1| hypothetical protein PTT_11528 [Pyrenophora teres f. teres 0-1] gi|311325606|gb|EFQ91583.1| hypothetical protein PTT_11528 [Pyrenophora teres f. teres 0-1] Length = 340 Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 41/129 (31%), Positives = 65/129 (50%), Gaps = 15/129 (11%) Query: 58 RDFYNVRLTL--SSDTFEPRPETELLVD--SALAFSLPRIEKRDVVRILDLGTGTGAVCL 113 R Y V + SSD+ P+T L V +A P++ I+D+ G+GA + Sbjct: 96 RPLYYVHSSFPASSDSVFFGPDTYLFVSFLQNIARYFPQVPSS----IIDVCCGSGAGAI 151 Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF-----DVI 168 + + P K +G+D++ +AL + NA GV F +S+ +++V G D+I Sbjct: 152 HMARTYPRAKTLGLDLNPRALSMGNFNAQLAGVEISF--AESNLYAAVPGYMKSCGVDLI 209 Query: 169 VSNPPYIES 177 VSNPPYI S Sbjct: 210 VSNPPYIAS 218 >gi|306829680|ref|ZP_07462870.1| methyltransferase domain protein [Streptococcus mitis ATCC 6249] gi|304428766|gb|EFM31856.1| methyltransferase domain protein [Streptococcus mitis ATCC 6249] Length = 196 Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 29/73 (39%), Positives = 44/73 (60%), Gaps = 3/73 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LD+G G G + L+L K + + VDI+ +AL++A+ NA N V QS+ + Sbjct: 61 VLDVGCGYGPLGLSLAK-AYGAQATMVDINNRALDLAQQNAERNKVEATI--FQSNIYEQ 117 Query: 161 VEGLFDVIVSNPP 173 VEG FD ++SNPP Sbjct: 118 VEGKFDHVISNPP 130 >gi|167461259|ref|ZP_02326348.1| possible 16S rRNA methyltransferase [Paenibacillus larvae subsp. larvae BRL-230010] gi|322381135|ref|ZP_08055138.1| ribosomal RNA methyltransferase-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321154711|gb|EFX46982.1| ribosomal RNA methyltransferase-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 199 Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 32/76 (42%), Positives = 44/76 (57%), Gaps = 2/76 (2%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 RILD+G G G + L K P +DI+ +A+E+AK NA N +S LQS+ F Sbjct: 59 ARILDVGCGYGPIGLTAAKLCPAGHVTLIDINERAVELAKLNARNNHISN-VTILQSNLF 117 Query: 159 SSV-EGLFDVIVSNPP 173 V + FDVI++NPP Sbjct: 118 EHVRDQKFDVILTNPP 133 >gi|323477798|gb|ADX83036.1| methyltransferase small [Sulfolobus islandicus HVE10/4] Length = 186 Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 29/75 (38%), Positives = 44/75 (58%), Gaps = 2/75 (2%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 + D+G G G + + L ++P K VD++ A+++AK NA NGV R L+SD F + Sbjct: 49 VADVGCGYGPIGIYLALKNPNLKVYMVDVNYIAIKLAKKNAKLNGVENRTIILKSDIFDN 108 Query: 161 --VEGLFDVIVSNPP 173 V+ F+ I SNPP Sbjct: 109 VPVDVKFNAIYSNPP 123 >gi|258626139|ref|ZP_05720987.1| HemK protein [Vibrio mimicus VM603] gi|258581494|gb|EEW06395.1| HemK protein [Vibrio mimicus VM603] Length = 103 Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 36/95 (37%), Positives = 47/95 (49%), Gaps = 1/95 (1%) Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE 226 +IVSNPPYIE +VR F+P+ +L +GL+ R I+ R L + G E Sbjct: 1 MIVSNPPYIEENDPHLNQGDVR-FEPKSALVAEENGLADIRYISTYAPRFLLEGGWLLFE 59 Query: 227 IGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261 GY+Q V I V +DY GNDRV L Sbjct: 60 HGYDQGEAVRTILRELGYQSVTTEQDYAGNDRVTL 94 >gi|148643433|ref|YP_001273946.1| methyltransferase, HemK [Methanobrevibacter smithii ATCC 35061] gi|222445675|ref|ZP_03608190.1| hypothetical protein METSMIALI_01316 [Methanobrevibacter smithii DSM 2375] gi|261349777|ref|ZP_05975194.1| putative methylase [Methanobrevibacter smithii DSM 2374] gi|148552450|gb|ABQ87578.1| methyltransferase, HemK [Methanobrevibacter smithii ATCC 35061] gi|222435240|gb|EEE42405.1| hypothetical protein METSMIALI_01316 [Methanobrevibacter smithii DSM 2375] gi|288860561|gb|EFC92859.1| putative methylase [Methanobrevibacter smithii DSM 2374] Length = 193 Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 40/126 (31%), Positives = 62/126 (49%), Gaps = 9/126 (7%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +L++GTG+G V + K + K DI+ ALE+AK N N + E + L + F Sbjct: 34 VLEIGTGSGIVAMYASKLTK--KVTATDINFDALELAKKNFKLNNI-ENIELLFGNLFEP 90 Query: 161 VEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 V+ FDVI+ N PY+ + EV D + + DGG+DG + V +LN Sbjct: 91 VKDRKFDVILFNTPYLPTE-----NDEVLDDNLNYAFDGGLDGRKVIDLFLNEVKNYLND 145 Query: 220 DGLCSV 225 G+ + Sbjct: 146 GGIVQL 151 >gi|89100359|ref|ZP_01173224.1| hypothetical protein B14911_01449 [Bacillus sp. NRRL B-14911] gi|89084980|gb|EAR64116.1| hypothetical protein B14911_01449 [Bacillus sp. NRRL B-14911] Length = 200 Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 37/97 (38%), Positives = 53/97 (54%), Gaps = 9/97 (9%) Query: 78 TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137 + LLV+ AF LP +E ILD+G G G + L++ K P VD++ +A+E+A Sbjct: 46 SRLLVE---AFKLPELEGN----ILDVGCGYGPIGLSIAKSFPERTVHMVDVNLRAIELA 98 Query: 138 KSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPP 173 K NA N VS +SD + V G F I++NPP Sbjct: 99 KENAAGNSVSNA-AIYESDRLTGVGGGKFAAILTNPP 134 >gi|300933613|ref|ZP_07148869.1| methylase of peptide chain release factors [Corynebacterium resistens DSM 45100] Length = 330 Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 68/241 (28%), Positives = 101/241 (41%), Gaps = 42/241 (17%) Query: 52 HRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIE-KRD----------VVR 100 I+G F V F PRPETELLVD A +L R + RD + Sbjct: 90 QHIVGAAVFDGVDFLCRPGGFIPRPETELLVDWAFHEALRRAKIHRDEATNSDDSSHCIS 149 Query: 101 ILDLGTGTGAVCLAL------LKESPFFKGVGVDISCKALEIAKSNA--------VTNGV 146 ++DL TG G++ LAL ++ +G+++ AL +A+ N +++ V Sbjct: 150 VVDLCTGPGSIALALACRFSDATQNALI--IGIELHEVALHLARDNEAQLRHRGLISDNV 207 Query: 147 SERFDTLQSDWFSSVE-------GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199 RF L+ D E DVIVSNPPY+ + +G EV DP ++ G Sbjct: 208 EVRF--LRCDLLDVEEVRKLPMGASPDVIVSNPPYVPTSA--PVGAEVL-HDPSDAVFAG 262 Query: 200 IDGLSHYRTI--ADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGND 257 DG+ + A G+ + G+ +E VR E +V +D G D Sbjct: 263 SDGMDFLPGLLGALGIIAGGEEVGV-GIEHDDANGAATVRALEEAGARVVEQHQDVAGRD 321 Query: 258 R 258 R Sbjct: 322 R 322 >gi|302345345|ref|YP_003813698.1| methyltransferase small domain protein [Prevotella melaninogenica ATCC 25845] gi|302149227|gb|ADK95489.1| methyltransferase small domain protein [Prevotella melaninogenica ATCC 25845] Length = 236 Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 46/154 (29%), Positives = 70/154 (45%), Gaps = 20/154 (12%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS--- 155 RILD+GTGTG + L + + + ++I ALE A N + ++R + L S Sbjct: 34 TRILDIGTGTGLIALMMAQRFSTAQIDAIEIDKGALEDAHLNVSASPFNDRINILNSSLQ 93 Query: 156 DWF----SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIAD 211 D+ + EG++D IV NPPY + + + L + + D LSH I Sbjct: 94 DYIPCSETQEEGIYDAIVCNPPYFINSLKNPL--------QQRTTARHTDTLSHQELIYH 145 Query: 212 GVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245 R L +G SV I Y+ K I E+ +F Sbjct: 146 S-KRLLKANGTLSVIIPYDNK----DILEAEAIF 174 >gi|259907286|ref|YP_002647642.1| 16S ribosomal RNA m2G1207 methyltransferase [Erwinia pyrifoliae Ep1/96] gi|224962908|emb|CAX54389.1| Ribosomal RNA small subunit methyltransferase C [Erwinia pyrifoliae Ep1/96] Length = 342 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 43/159 (27%), Positives = 70/159 (44%), Gaps = 30/159 (18%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LD+G G G + L SP + D++ A+ +K+ N + D S+ +S Sbjct: 199 KVLDMGCGAGVLSAMLASFSPKVRLTLTDVNAAAIASSKATLTANQLEG--DVFASNVYS 256 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 + G FD+I+SNPP+ + V + SLD +T+ G HLN Sbjct: 257 DISGRFDMIISNPPFHDGV--------------QTSLDAA-------QTLIRGAVSHLNT 295 Query: 220 DG----LCSVEIGYNQKVDVVRIFESRKLFLVNA-FKDY 253 G + + + Y Q +D F S ++ L N FK Y Sbjct: 296 GGELRIVANAFLPYPQVLD--EAFGSHEVLLQNGRFKVY 332 >gi|212693330|ref|ZP_03301458.1| hypothetical protein BACDOR_02842 [Bacteroides dorei DSM 17855] gi|237710069|ref|ZP_04540550.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] gi|212664095|gb|EEB24667.1| hypothetical protein BACDOR_02842 [Bacteroides dorei DSM 17855] gi|229456162|gb|EEO61883.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] Length = 234 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 44/133 (33%), Positives = 65/133 (48%), Gaps = 11/133 (8%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159 ILD+GTGTG + L ++ + + VDI A+E A+ N + +R + LQ Sbjct: 41 ILDVGTGTGLISL-MMAQRCNAQIRAVDIDADAVEQARGNVAASPWQDRIEVELQDICHF 99 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 + E LFDVIVSNPPY D L R + D L + +A+ +R L+ Sbjct: 100 TSETLFDVIVSNPPY----FTDSLKCPERQRNIARHTD-----LLDFDKLAESAARLLHS 150 Query: 220 DGLCSVEIGYNQK 232 +G+ SV I + K Sbjct: 151 EGVFSVIIPADGK 163 >gi|295698693|ref|YP_003603348.1| hypothetical adenine-specific methylase [Candidatus Riesia pediculicola USDA] gi|291157085|gb|ADD79530.1| hypothetical adenine-specific methylase [Candidatus Riesia pediculicola USDA] Length = 119 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 29/79 (36%), Positives = 45/79 (56%), Gaps = 2/79 (2%) Query: 153 LQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIAD 211 + SD F+S+ +D+I++NPPY++ + L E + +P ISL G DGL + I Sbjct: 2 IHSDLFTSIPPKKYDLIITNPPYVDQKTLGMLPKEYQ-MEPVISLRAGEDGLKFIKKILR 60 Query: 212 GVSRHLNKDGLCSVEIGYN 230 S LN++GL E+G N Sbjct: 61 YSSYFLNENGLLICEVGEN 79 >gi|257437590|ref|ZP_05613345.1| ribosomal protein L11 methyltransferase [Faecalibacterium prausnitzii A2-165] gi|257199897|gb|EEU98181.1| ribosomal protein L11 methyltransferase [Faecalibacterium prausnitzii A2-165] Length = 304 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 41/134 (30%), Positives = 60/134 (44%), Gaps = 19/134 (14%) Query: 56 GWRDFYNV-----RLTLSSDTFEPRPE-TELLVDSALAFSLPRIEK------------RD 97 GWR +Y+ RL + E + +L++D LAF E R Sbjct: 108 GWRKYYHPMDIGKRLAIVPSWQEYDTDRVKLILDPGLAFGTGGHETTSLCLEALDERVRG 167 Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 R+LD+GTG+G + +A LK GVDI A+ A NA NGV+++ L D Sbjct: 168 GERVLDIGTGSGILAIAALKLGAG-SAEGVDIDPVAVRTAGENAALNGVADKLTVLVGDL 226 Query: 158 FSSVEGLFDVIVSN 171 G +D+I +N Sbjct: 227 SDKASGRYDIITAN 240 >gi|301168613|emb|CBW28203.1| 16S rRNA m2G1207 methylase [Haemophilus influenzae 10810] Length = 330 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 34/118 (28%), Positives = 56/118 (47%), Gaps = 2/118 (1%) Query: 57 WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116 WR + + L + P + +D+ L I+ + ++LDLG G G + + Sbjct: 150 WRTYQHSTLENLTIYSLPGVFSAAELDTGTELLLSTIDNKIKGKVLDLGCGAGVIGSMIK 209 Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174 K +P + DI ALE A+ N + + + SD FS +E FD+I+SNPP+ Sbjct: 210 KRAPNAQITMTDIHAMALESARKTLSENQL--QGEVYASDVFSDIEEKFDLIISNPPF 265 >gi|183603138|ref|ZP_02964308.1| methyltransferase small domain superfamily [Streptococcus pneumoniae CDC1087-00] gi|183571063|gb|EDT91591.1| methyltransferase small domain superfamily [Streptococcus pneumoniae CDC1087-00] gi|332202695|gb|EGJ16764.1| methyltransferase small domain protein [Streptococcus pneumoniae GA41317] Length = 193 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 28/73 (38%), Positives = 45/73 (61%), Gaps = 3/73 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LD+G G G + L+L K + + VDI+ +AL++A+ NA N + + QS+ + Sbjct: 58 VLDVGCGYGPLGLSLAK-AYGVQATMVDINTRALDLARRNAEKN--NAKATIFQSNIYEQ 114 Query: 161 VEGLFDVIVSNPP 173 VEG FD ++SNPP Sbjct: 115 VEGHFDHVISNPP 127 >gi|310765221|gb|ADP10171.1| Ribosomal RNA small subunit methyltransferase [Erwinia sp. Ejp617] Length = 384 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 43/159 (27%), Positives = 70/159 (44%), Gaps = 30/159 (18%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LD+G G G + L SP + D++ A+ +K+ N + D S+ +S Sbjct: 241 KVLDMGCGAGVLSAMLASFSPKVRLTLTDVNAAAIASSKATLAANQLEG--DVFASNVYS 298 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 + G FD+I+SNPP+ + V + SLD +T+ G HLN Sbjct: 299 DISGRFDMIISNPPFHDGV--------------QTSLDAA-------QTLIRGAVSHLNT 337 Query: 220 DG----LCSVEIGYNQKVDVVRIFESRKLFLVNA-FKDY 253 G + + + Y Q +D F S ++ L N FK Y Sbjct: 338 GGELRIVANAFLPYPQVLD--EAFGSHEVLLQNGRFKVY 374 >gi|254773433|ref|ZP_05214949.1| methylase, putative [Mycobacterium avium subsp. avium ATCC 25291] Length = 220 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 44/139 (31%), Positives = 68/139 (48%), Gaps = 15/139 (10%) Query: 68 SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 + + ++P+ ++ LLVD L I R R+LDL TG+G V +A E Sbjct: 4 AHNVYQPQEDSRLLVDVMHGTGL--IPGR---RVLDLCTGSGFVAIAA-AEMGCASVTAF 57 Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIES---VIVDCL 183 D A++ A+ NA GV D + W ++V+ FDV+VSNPPY+ + ++D L Sbjct: 58 DKCPHAVQCARENAALAGVD--VDVREGSWLAAVDCAPFDVVVSNPPYVPTPPGAVLDEL 115 Query: 184 GLEVRDFDPRISLDGGIDG 202 G P + + G DG Sbjct: 116 GPVT---GPSWAWNAGRDG 131 >gi|39995743|ref|NP_951694.1| hypothetical protein GSU0637 [Geobacter sulfurreducens PCA] gi|39982507|gb|AAR33967.1| conserved hypothetical protein [Geobacter sulfurreducens PCA] gi|298504754|gb|ADI83477.1| O-methyltransferase, putative [Geobacter sulfurreducens KN400] Length = 258 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 31/83 (37%), Positives = 45/83 (54%), Gaps = 12/83 (14%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R +DLGTG+G + L L + P VGV+ + +A+ N NG++ER L+ D Sbjct: 49 RGIDLGTGSGIIPLVLARRCPGSTFVGVEFQERMAHLAERNVHLNGLAERIAILRED--- 105 Query: 160 SVEGL--------FDVIVSNPPY 174 V GL FD+++SNPPY Sbjct: 106 -VLGLRRRFPVSSFDLVLSNPPY 127 >gi|301793981|emb|CBW36379.1| putative methyltransferase [Streptococcus pneumoniae INV104] Length = 193 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 28/73 (38%), Positives = 45/73 (61%), Gaps = 3/73 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LD+G G G + L+L+K + VDI+ +AL++A+ NA N + + QS+ + Sbjct: 58 VLDVGCGYGPLGLSLVKVYGV-QATMVDINTRALDLARRNAEKN--NAKATIFQSNIYEQ 114 Query: 161 VEGLFDVIVSNPP 173 VEG FD ++SNPP Sbjct: 115 VEGHFDHVISNPP 127 >gi|114561726|ref|YP_749239.1| rRNA (guanine-N(2)-)-methyltransferase [Shewanella frigidimarina NCIMB 400] gi|122300833|sp|Q088B4|RSMC_SHEFN RecName: Full=Ribosomal RNA small subunit methyltransferase C; AltName: Full=16S rRNA m2G1207 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rsmC gi|114333019|gb|ABI70401.1| 16S rRNA m(2)G 1207 methyltransferase [Shewanella frigidimarina NCIMB 400] Length = 345 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 43/149 (28%), Positives = 68/149 (45%), Gaps = 16/149 (10%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+LD G G G + ALLK +P +DI+ AL + N + + SD F+ Sbjct: 208 RVLDFGCGAGVITAALLKANPELTIECIDINAMALLSCELTLAANSMQAK--VYPSDGFN 265 Query: 160 SVEGLFDVIVSNPPYIESV--IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217 + G FD I+SNPP+ + + D V+ R++ +G ++ +A+ RHL Sbjct: 266 QITGKFDGIISNPPFHDGLTSTTDIATQFVQQSAIRLTSNGI------WQIVAN---RHL 316 Query: 218 NKDGLCSVEIGYNQKVDVVRIFESRKLFL 246 + G KV+VV KL+L Sbjct: 317 PYSETIATHFG---KVNVVAENNKYKLYL 342 >gi|16081280|ref|NP_393592.1| N-methyl-transferase related protein [Thermoplasma acidophilum DSM 1728] gi|10639259|emb|CAC11261.1| N-methyl-transferase related protein [Thermoplasma acidophilum] Length = 182 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 31/76 (40%), Positives = 44/76 (57%), Gaps = 4/76 (5%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 + +++G GTG V + LK + V DIS A+E AK NA NG++ + +SD FS Sbjct: 33 KAIEIGCGTGIVSICFLKRGCDIEAV--DISDLAVECAKDNASRNGLTLK--VYRSDLFS 88 Query: 160 SVEGLFDVIVSNPPYI 175 V G +D I+ N PYI Sbjct: 89 GVSGTYDTILFNAPYI 104 >gi|227827979|ref|YP_002829759.1| methyltransferase small [Sulfolobus islandicus M.14.25] gi|227830702|ref|YP_002832482.1| methyltransferase [Sulfolobus islandicus L.S.2.15] gi|229581727|ref|YP_002840126.1| methyltransferase small [Sulfolobus islandicus Y.N.15.51] gi|229585246|ref|YP_002843748.1| methyltransferase small [Sulfolobus islandicus M.16.27] gi|238620205|ref|YP_002915031.1| methyltransferase small [Sulfolobus islandicus M.16.4] gi|284998227|ref|YP_003419994.1| methyltransferase small [Sulfolobus islandicus L.D.8.5] gi|227457150|gb|ACP35837.1| methyltransferase small [Sulfolobus islandicus L.S.2.15] gi|227459775|gb|ACP38461.1| methyltransferase small [Sulfolobus islandicus M.14.25] gi|228012443|gb|ACP48204.1| methyltransferase small [Sulfolobus islandicus Y.N.15.51] gi|228020296|gb|ACP55703.1| methyltransferase small [Sulfolobus islandicus M.16.27] gi|238381275|gb|ACR42363.1| methyltransferase small [Sulfolobus islandicus M.16.4] gi|284446122|gb|ADB87624.1| methyltransferase small [Sulfolobus islandicus L.D.8.5] Length = 186 Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 29/75 (38%), Positives = 44/75 (58%), Gaps = 2/75 (2%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 + D+G G G + + L ++P K VD++ A+++AK NA NGV R L+SD F + Sbjct: 49 VADVGCGYGPIGIYLALKNPNLKVYMVDVNYIAIKLAKKNAKLNGVENRTIILKSDIFDN 108 Query: 161 --VEGLFDVIVSNPP 173 V+ F+ I SNPP Sbjct: 109 VPVDVKFNAIYSNPP 123 >gi|309972854|gb|ADO96055.1| 16S rRNA m2G1207 methylase [Haemophilus influenzae R2846] Length = 330 Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 31/97 (31%), Positives = 49/97 (50%), Gaps = 2/97 (2%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 +D+ L I+ + ++LDLG G G + + K S + DI ALE A Sbjct: 175 LDTGTELLLSTIDNKIKGKVLDLGCGAGVIGSVIKKSSTNAQITMTDIHAMALESAHKTL 234 Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESV 178 N + + + SD FS +EG FD+I+SNPP+ + + Sbjct: 235 SENQL--QGEVYASDVFSDIEGKFDLIISNPPFHDGI 269 >gi|281424314|ref|ZP_06255227.1| SmtA protein [Prevotella oris F0302] gi|281401583|gb|EFB32414.1| SmtA protein [Prevotella oris F0302] Length = 231 Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 30/78 (38%), Positives = 42/78 (53%), Gaps = 3/78 (3%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW-- 157 R+LD+GTGTG + L L + P K +DI+ +A AK N + + + Q+ Sbjct: 38 RVLDIGTGTGVIALMLAQRFPEAKITAIDIAEEACRQAKENVSASPFAHQVQVEQTSLQE 97 Query: 158 FSSVEGLFDVIVSNPPYI 175 F S E FD IVSNPP+ Sbjct: 98 FESAE-RFDCIVSNPPFF 114 >gi|68248563|ref|YP_247675.1| 16S ribosomal RNA m2G1207 methyltransferase [Haemophilus influenzae 86-028NP] gi|81337010|sp|Q4QPN2|RSMC_HAEI8 RecName: Full=Ribosomal RNA small subunit methyltransferase C; AltName: Full=16S rRNA m2G1207 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rsmC gi|68056762|gb|AAX87015.1| ribosomal RNA small subunit methyltransferase C [Haemophilus influenzae 86-028NP] Length = 330 Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 31/97 (31%), Positives = 49/97 (50%), Gaps = 2/97 (2%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 +D+ L I+ + ++LDLG G G + + K S + DI ALE A Sbjct: 175 LDTGTELLLSTIDNKIKGKVLDLGCGAGVIGSVIKKSSTNAQITMTDIHAMALESAHKTL 234 Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESV 178 N + + + SD FS +EG FD+I+SNPP+ + + Sbjct: 235 SENQL--QGEVYASDVFSDIEGKFDLIISNPPFHDGI 269 >gi|332524054|ref|ZP_08400306.1| methyltransferase small domain protein [Streptococcus porcinus str. Jelinkova 176] gi|332315318|gb|EGJ28303.1| methyltransferase small domain protein [Streptococcus porcinus str. Jelinkova 176] Length = 196 Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 31/76 (40%), Positives = 45/76 (59%), Gaps = 9/76 (11%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVG---VDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 +LD+G G G + +AL K +GV +DI+ +A+E+AK NA N V QS+ Sbjct: 61 LLDVGCGYGPLGIALAKT----QGVSATLIDINNRAIELAKKNATYNEV--EVTIYQSNI 114 Query: 158 FSSVEGLFDVIVSNPP 173 + +V G FD I+SNPP Sbjct: 115 YENVTGQFDHIISNPP 130 >gi|116333247|ref|YP_794774.1| 16S RNA G1207 methylase RsmC [Lactobacillus brevis ATCC 367] gi|116098594|gb|ABJ63743.1| 16S RNA G1207 methylase RsmC [Lactobacillus brevis ATCC 367] Length = 203 Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 29/72 (40%), Positives = 41/72 (56%), Gaps = 1/72 (1%) Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 LDLGTG G + LAL K P + VD++ ALE+A+ NA N + E + SD + V Sbjct: 64 LDLGTGYGPIGLALAKRWPDRQVTMVDVNELALELARKNATANQI-ENVEIKTSDIYDQV 122 Query: 162 EGLFDVIVSNPP 173 + I++NPP Sbjct: 123 TQRYAAILTNPP 134 >gi|86157207|ref|YP_463992.1| methyltransferase [Anaeromyxobacter dehalogenans 2CP-C] gi|85773718|gb|ABC80555.1| Methyltransferase [Anaeromyxobacter dehalogenans 2CP-C] Length = 382 Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 28/78 (35%), Positives = 46/78 (58%), Gaps = 4/78 (5%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R D+GTGTG LAL+ + + D+ +A+ A+ NA G++ + + +++D F Sbjct: 207 RAFDVGTGTG--VLALVLARAGARVIATDLEPRAVACARENAARLGLAGQVEVVEADLFP 264 Query: 160 SVEGLFDVIVSNPPYIES 177 EG+ DVIV NPP+I + Sbjct: 265 --EGVADVIVCNPPWIPA 280 >gi|325264822|ref|ZP_08131550.1| SAM-dependent methyltransferase [Clostridium sp. D5] gi|324029811|gb|EGB91098.1| SAM-dependent methyltransferase [Clostridium sp. D5] Length = 239 Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 31/100 (31%), Positives = 55/100 (55%), Gaps = 6/100 (6%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 +D+ L R++K + V LDLGTGTG + + L ++ G++I ++ ++A+ + Sbjct: 32 IDAVLLSDFVRVKKDETV--LDLGTGTGILPILLAAKTRGKHFTGLEIQAESADMAERSV 89 Query: 142 VTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIES 177 N + ++ D + D + E FDVIV+NPPY+ S Sbjct: 90 EHNRLGDQIDIVTGDIKEAAEIFRPAFFDVIVTNPPYMLS 129 >gi|94990567|ref|YP_598667.1| 16S rRNA m(2)G 1207 methyltransferase [Streptococcus pyogenes MGAS10270] gi|94544075|gb|ABF34123.1| 16S rRNA m(2)G 1207 methyltransferase [Streptococcus pyogenes MGAS10270] Length = 208 Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 31/96 (32%), Positives = 53/96 (55%), Gaps = 3/96 (3%) Query: 78 TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137 ++ +VD L + ++ R+LDLG G G + ++L K VDI+ +AL++A Sbjct: 49 SKKMVDFGSQVLLKTLNFKENERVLDLGCGYGPLGISLAKVQRV-DATLVDINNRALDLA 107 Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173 + NA N V+ QS+ + ++ G F+ I+SNPP Sbjct: 108 RKNATNNQVA--VTIFQSNIYENISGHFEHIISNPP 141 >gi|305662621|ref|YP_003858909.1| methyltransferase small [Ignisphaera aggregans DSM 17230] gi|304377190|gb|ADM27029.1| methyltransferase small [Ignisphaera aggregans DSM 17230] Length = 198 Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 27/77 (35%), Positives = 45/77 (58%), Gaps = 2/77 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV-SERFDTLQSDWF 158 R+LDLG G GA+ + + +P + VDI+ +A+ +A+ N + N + +R Q + + Sbjct: 59 RVLDLGCGYGAIGIVVALLNPKLEVYMVDINREAVRLAERNVIRNKIDPQRIKIFQGNLY 118 Query: 159 SSVEG-LFDVIVSNPPY 174 V+ LF+ I SNPPY Sbjct: 119 EPVKDILFNAIYSNPPY 135 >gi|117620051|ref|YP_858250.1| ribosomal RNA small subunit methyltransferase C (rRNA(guanine-N(2)-)-methyltransferase) [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|226712986|sp|A0KPP9|RSMC_AERHH RecName: Full=Ribosomal RNA small subunit methyltransferase C; AltName: Full=16S rRNA m2G1207 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rsmC gi|117561458|gb|ABK38406.1| ribosomal RNA small subunit methyltransferase C (rRNA(guanine-N(2)-)-methyltransferase) [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 342 Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 6/86 (6%) Query: 89 SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148 SLP ++ +LD G G G + L K +P K VDI+ ALE ++ NG+ Sbjct: 198 SLPAMQGS----LLDFGCGAGVIGSVLAKRNPGLKVTMVDINALALESSRRTLAINGL-- 251 Query: 149 RFDTLQSDWFSSVEGLFDVIVSNPPY 174 + + SD +S ++G F IVSNPP+ Sbjct: 252 QGEVWASDVYSDIQGKFGRIVSNPPF 277 >gi|311896978|dbj|BAJ29386.1| hypothetical protein KSE_35810 [Kitasatospora setae KM-6054] Length = 516 Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 39/132 (29%), Positives = 63/132 (47%), Gaps = 15/132 (11%) Query: 95 KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154 +R V +LDLG+G+G L + + + D++ +AL + A +G ER +T + Sbjct: 175 RRPVREVLDLGSGSGVQALHAARHAQ--RVTATDLNPRALHFTRLTAALSGF-ERVETAE 231 Query: 155 SDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213 + V + FD+IVSNPP++ S F R DGG+ G R++ G Sbjct: 232 GSLYEPVGDRRFDLIVSNPPFVIS--------PAGRFTYR---DGGMAGDELCRSVVRGA 280 Query: 214 SRHLNKDGLCSV 225 + HL G C + Sbjct: 281 AAHLEPGGYCQL 292 >gi|256397545|ref|YP_003119109.1| methyltransferase small [Catenulispora acidiphila DSM 44928] gi|256363771|gb|ACU77268.1| methyltransferase small [Catenulispora acidiphila DSM 44928] Length = 496 Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 43/125 (34%), Positives = 61/125 (48%), Gaps = 10/125 (8%) Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 LD+GTG G L L + + VG D + +AL++A+ +GV FD + F V Sbjct: 152 LDVGTGGGVQALHL--STHVERVVGSDRNPRALKLARLTQQLSGVGP-FDLREGSLFEPV 208 Query: 162 EG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220 EG FD++VSNPP+ VI G + F + D G+ R + RHL +D Sbjct: 209 EGERFDLVVSNPPF---VISPDNGAQGGRF---VYRDSGLPADEVCRRLVSNAHRHLAED 262 Query: 221 GLCSV 225 G C V Sbjct: 263 GWCQV 267 >gi|295677830|ref|YP_003606354.1| methyltransferase small [Burkholderia sp. CCGE1002] gi|295437673|gb|ADG16843.1| methyltransferase small [Burkholderia sp. CCGE1002] Length = 374 Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 36/106 (33%), Positives = 56/106 (52%), Gaps = 4/106 (3%) Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162 D+GTGTG V ALL + K V D +AL A+ N G + + + +Q+D F + Sbjct: 201 DIGTGTG-VLAALLAKRGVRKIVATDQDARALACARENLARLGYAGQVEVVQADLFP--D 257 Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208 G ++V NPP++ + L V D D R+ L G ++GL+ + T Sbjct: 258 GRAPLVVCNPPWVPARPASPLEYAVYDPDSRMLL-GFLNGLADHLT 302 >gi|119503187|ref|ZP_01625271.1| modification methylase, HemK family protein [marine gamma proteobacterium HTCC2080] gi|119460833|gb|EAW41924.1| modification methylase, HemK family protein [marine gamma proteobacterium HTCC2080] Length = 314 Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 41/142 (28%), Positives = 71/142 (50%), Gaps = 9/142 (6%) Query: 91 PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN----AVTNGV 146 P + +RI+D+ G G++ L SP + +DI AL +A +N + N + Sbjct: 129 PWFNQATPLRIVDVCCGGGSLGLLAAYHSPESHVLLLDIDADALALAGTNRRDQGMGNTL 188 Query: 147 SERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206 + D L++ SSV D+I++NPPY+++ + L E +PR++L G DGL Sbjct: 189 CVQADLLEALAPSSV----DIILANPPYVDAEDMANLPQEYH-HEPRLALAAGDDGLDLV 243 Query: 207 RTIADGVSRHLNKDGLCSVEIG 228 + S L+ G+ +E+G Sbjct: 244 HRLLRQASLVLSPHGMLFLEVG 265 >gi|307709017|ref|ZP_07645477.1| hypothetical protein SMSK564_0264 [Streptococcus mitis SK564] gi|307620353|gb|EFN99469.1| hypothetical protein SMSK564_0264 [Streptococcus mitis SK564] Length = 193 Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 33/93 (35%), Positives = 50/93 (53%), Gaps = 3/93 (3%) Query: 81 LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140 +VD L +E +LD+G G G + L+L K + + VDI+ +AL++A+ N Sbjct: 38 MVDFGSQLLLKCLEVNQGETVLDVGCGYGPLGLSLAK-AFGVQATMVDINNRALDLAQQN 96 Query: 141 AVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173 A N V QS+ + VEG FD ++SNPP Sbjct: 97 AERNKVEATI--FQSNIYEQVEGKFDHVISNPP 127 >gi|265753718|ref|ZP_06089073.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA] gi|263235432|gb|EEZ20956.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA] Length = 234 Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 44/133 (33%), Positives = 65/133 (48%), Gaps = 11/133 (8%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159 ILD+GTGTG + L ++ + + VDI A+E A+ N + +R + LQ Sbjct: 41 ILDVGTGTGLISL-IMAQRCNAQIRAVDIDADAVEQARGNVAASPWQDRIEVELQDICHF 99 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 + E LFDVIVSNPPY D L R + D L + +A+ +R L+ Sbjct: 100 TSETLFDVIVSNPPY----FTDSLKCPERQRNIARHTD-----LLDFDKLAESAARLLHS 150 Query: 220 DGLCSVEIGYNQK 232 +G+ SV I + K Sbjct: 151 EGVFSVIIPADGK 163 >gi|120597610|ref|YP_962184.1| rRNA (guanine-N(2)-)-methyltransferase [Shewanella sp. W3-18-1] gi|146294251|ref|YP_001184675.1| rRNA (guanine-N(2)-)-methyltransferase [Shewanella putrefaciens CN-32] gi|226712993|sp|A1RG35|RSMC_SHESW RecName: Full=Ribosomal RNA small subunit methyltransferase C; AltName: Full=16S rRNA m2G1207 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rsmC gi|226712998|sp|A4YA93|RSMC_SHEPC RecName: Full=Ribosomal RNA small subunit methyltransferase C; AltName: Full=16S rRNA m2G1207 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rsmC gi|120557703|gb|ABM23630.1| 16S rRNA m(2)G 1207 methyltransferase [Shewanella sp. W3-18-1] gi|145565941|gb|ABP76876.1| 16S rRNA m(2)G 1207 methyltransferase [Shewanella putrefaciens CN-32] Length = 347 Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 2/75 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+LD G G G + ALLK P +DI+ AL + NG++ + SD + Sbjct: 209 RVLDFGCGAGVIAAALLKAQPHLSLECIDINAMALASCELTLAANGMTAK--VYPSDGLA 266 Query: 160 SVEGLFDVIVSNPPY 174 G F+ I+SNPP+ Sbjct: 267 QTTGKFNGIISNPPF 281 >gi|319427613|gb|ADV55687.1| methyltransferase small [Shewanella putrefaciens 200] Length = 347 Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 2/75 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+LD G G G + ALLK P +DI+ AL + NG++ + SD + Sbjct: 209 RVLDFGCGAGVIAAALLKAQPHLSLECIDINAMALASCELTLAANGMTAK--VYPSDGLA 266 Query: 160 SVEGLFDVIVSNPPY 174 G F+ I+SNPP+ Sbjct: 267 QTTGKFNGIISNPPF 281 >gi|71903581|ref|YP_280384.1| 16S rRNA m(2)G 1207 methyltransferase [Streptococcus pyogenes MGAS6180] gi|71802676|gb|AAX72029.1| 16S rRNA m(2)G 1207 methyltransferase [Streptococcus pyogenes MGAS6180] Length = 208 Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 31/93 (33%), Positives = 51/93 (54%), Gaps = 3/93 (3%) Query: 81 LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140 +VD L + ++ R+LDLG G G + ++L K VDI+ +AL++A+ N Sbjct: 52 MVDFGSQVLLETLNFKENERVLDLGCGYGPLGISLAKVQRV-DATLVDINNRALDLARKN 110 Query: 141 AVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173 A N V+ QS+ + ++ G F+ I+SNPP Sbjct: 111 ATNNQVA--VTIFQSNIYENISGHFEHIISNPP 141 >gi|71910757|ref|YP_282307.1| 16S rRNA m(2)G 1207 methyltransferase [Streptococcus pyogenes MGAS5005] gi|71853539|gb|AAZ51562.1| 16S rRNA m(2)G 1207 methyltransferase [Streptococcus pyogenes MGAS5005] Length = 195 Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 31/96 (32%), Positives = 53/96 (55%), Gaps = 3/96 (3%) Query: 78 TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137 ++ +VD L + ++ R+LDLG G G + ++L K VDI+ +AL++A Sbjct: 38 SKKMVDFGSQVLLKTLNFKENERVLDLGCGYGPLGISLAKVQRV-DATLVDINNRALDLA 96 Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173 + NA N V+ QS+ + ++ G F+ I+SNPP Sbjct: 97 RKNATNNQVA--VTIFQSNIYENISGHFEHIISNPP 130 >gi|15675194|ref|NP_269368.1| 16S rRNA m(2)G 1207 methyltransferase [Streptococcus pyogenes M1 GAS] gi|13622360|gb|AAK34089.1| conserved hypothetical protein [Streptococcus pyogenes M1 GAS] Length = 197 Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 31/96 (32%), Positives = 53/96 (55%), Gaps = 3/96 (3%) Query: 78 TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137 ++ +VD L + ++ R+LDLG G G + ++L K VDI+ +AL++A Sbjct: 38 SKKMVDFGSQVLLKTLNFKENERVLDLGCGYGPLGISLAKVQRV-DATLVDINNRALDLA 96 Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173 + NA N V+ QS+ + ++ G F+ I+SNPP Sbjct: 97 RKNATNNQVA--VTIFQSNIYENISGHFEHIISNPP 130 >gi|50914279|ref|YP_060251.1| 16S rRNA m(2)G 1207 methyltransferase [Streptococcus pyogenes MGAS10394] gi|94988677|ref|YP_596778.1| 16S rRNA m(2)G 1207 methyltransferase [Streptococcus pyogenes MGAS9429] gi|94992500|ref|YP_600599.1| 16S rRNA m(2)G 1207 methyltransferase [Streptococcus pyogenes MGAS2096] gi|94994489|ref|YP_602587.1| 16S rRNA m(2)G 1207 methyltransferase [Streptococcus pyogenes MGAS10750] gi|306827290|ref|ZP_07460577.1| methyltransferase domain protein [Streptococcus pyogenes ATCC 10782] gi|50903353|gb|AAT87068.1| 16S rRNA m(2)G 1207 methyltransferase [Streptococcus pyogenes MGAS10394] gi|94542185|gb|ABF32234.1| 16S rRNA m(2)G 1207 methyltransferase [Streptococcus pyogenes MGAS9429] gi|94546008|gb|ABF36055.1| 16S rRNA m(2)G 1207 methyltransferase [Streptococcus pyogenes MGAS2096] gi|94547997|gb|ABF38043.1| 16S rRNA m(2)G 1207 methyltransferase [Streptococcus pyogenes MGAS10750] gi|304430437|gb|EFM33459.1| methyltransferase domain protein [Streptococcus pyogenes ATCC 10782] Length = 208 Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 31/96 (32%), Positives = 53/96 (55%), Gaps = 3/96 (3%) Query: 78 TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137 ++ +VD L + ++ R+LDLG G G + ++L K VDI+ +AL++A Sbjct: 49 SKKMVDFGSQVLLETLNFKENERVLDLGCGYGPLGISLAKVQRV-DATLVDINNRALDLA 107 Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173 + NA N V+ QS+ + ++ G F+ I+SNPP Sbjct: 108 RKNATNNQVA--VTIFQSNIYENISGHFEHIISNPP 141 >gi|28895982|ref|NP_802332.1| 16S rRNA m(2)G 1207 methyltransferase [Streptococcus pyogenes SSI-1] gi|28811232|dbj|BAC64165.1| conserved hypothetical protein [Streptococcus pyogenes SSI-1] Length = 208 Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 31/93 (33%), Positives = 51/93 (54%), Gaps = 3/93 (3%) Query: 81 LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140 +VD L + ++ R+LDLG G G + ++L K VDI+ +AL++A+ N Sbjct: 52 MVDFGSQVLLETLNFKENERVLDLGCGYGPLGISLAKVQRV-DATLVDINNRALDLARKN 110 Query: 141 AVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173 A N V+ QS+ + ++ G F+ I+SNPP Sbjct: 111 ATNNQVA--VTIFQSNIYENISGHFEHIISNPP 141 >gi|21910406|ref|NP_664674.1| 16S rRNA m(2)G 1207 methyltransferase [Streptococcus pyogenes MGAS315] gi|21904604|gb|AAM79477.1| conserved hypothetical protein [Streptococcus pyogenes MGAS315] Length = 197 Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 31/93 (33%), Positives = 51/93 (54%), Gaps = 3/93 (3%) Query: 81 LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140 +VD L + ++ R+LDLG G G + ++L K VDI+ +AL++A+ N Sbjct: 41 MVDFGSQVLLETLNFKENERVLDLGCGYGPLGISLAKVQRV-DATLVDINNRALDLARKN 99 Query: 141 AVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173 A N V+ QS+ + ++ G F+ I+SNPP Sbjct: 100 ATNNQVA--VTIFQSNIYENISGHFEHIISNPP 130 >gi|126175727|ref|YP_001051876.1| rRNA (guanine-N(2)-)-methyltransferase [Shewanella baltica OS155] gi|226712988|sp|A3D8E4|RSMC_SHEB5 RecName: Full=Ribosomal RNA small subunit methyltransferase C; AltName: Full=16S rRNA m2G1207 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rsmC gi|125998932|gb|ABN63007.1| 16S rRNA m(2)G 1207 methyltransferase [Shewanella baltica OS155] Length = 347 Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 27/75 (36%), Positives = 38/75 (50%), Gaps = 2/75 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+LD G G G + ALLK P VDI+ AL + NG++ + SD + Sbjct: 209 RVLDFGCGAGVIAAALLKAQPSLSLECVDINAMALASCELTLAANGMTAK--VYPSDGLA 266 Query: 160 SVEGLFDVIVSNPPY 174 G F+ I+SNPP+ Sbjct: 267 QTTGKFNGIISNPPF 281 >gi|304411144|ref|ZP_07392759.1| methyltransferase small [Shewanella baltica OS183] gi|307306439|ref|ZP_07586182.1| methyltransferase small [Shewanella baltica BA175] gi|304350337|gb|EFM14740.1| methyltransferase small [Shewanella baltica OS183] gi|306910730|gb|EFN41158.1| methyltransferase small [Shewanella baltica BA175] Length = 347 Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 27/75 (36%), Positives = 38/75 (50%), Gaps = 2/75 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+LD G G G + ALLK P VDI+ AL + NG++ + SD + Sbjct: 209 RVLDFGCGAGVIAAALLKAQPSLSLECVDINAMALASCELTLAANGMTAK--VYPSDGLA 266 Query: 160 SVEGLFDVIVSNPPY 174 G F+ I+SNPP+ Sbjct: 267 QTTGKFNGIISNPPF 281 >gi|283477104|emb|CAY73004.1| Ribosomal RNA small subunit methyltransferase [Erwinia pyrifoliae DSM 12163] Length = 447 Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 43/159 (27%), Positives = 70/159 (44%), Gaps = 30/159 (18%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LD+G G G + L SP + D++ A+ +K+ N + D S+ +S Sbjct: 304 KVLDMGCGAGVLSAMLASFSPKVRLTLTDVNAAAIASSKATLTANQLEG--DVFASNVYS 361 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 + G FD+I+SNPP+ + V + SLD +T+ G HLN Sbjct: 362 DISGRFDMIISNPPFHDGV--------------QTSLDAA-------QTLIRGAVSHLNT 400 Query: 220 DG----LCSVEIGYNQKVDVVRIFESRKLFLVNA-FKDY 253 G + + + Y Q +D F S ++ L N FK Y Sbjct: 401 GGELRIVANAFLPYPQVLD--EAFGSHEVLLQNGRFKVY 437 >gi|152999345|ref|YP_001365026.1| rRNA (guanine-N(2)-)-methyltransferase [Shewanella baltica OS185] gi|217972021|ref|YP_002356772.1| rRNA (guanine-N(2)-)-methyltransferase [Shewanella baltica OS223] gi|226712989|sp|A6WJH4|RSMC_SHEB8 RecName: Full=Ribosomal RNA small subunit methyltransferase C; AltName: Full=16S rRNA m2G1207 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rsmC gi|151363963|gb|ABS06963.1| rRNA (guanine-N(2)-)-methyltransferase [Shewanella baltica OS185] gi|217497156|gb|ACK45349.1| rRNA (guanine-N(2)-)-methyltransferase [Shewanella baltica OS223] Length = 347 Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 27/75 (36%), Positives = 38/75 (50%), Gaps = 2/75 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+LD G G G + ALLK P VDI+ AL + NG++ + SD + Sbjct: 209 RVLDFGCGAGVIAAALLKAQPSLSLECVDINAMALASCELTLAANGMTAK--VYPSDGLA 266 Query: 160 SVEGLFDVIVSNPPY 174 G F+ I+SNPP+ Sbjct: 267 QTTGKFNGIISNPPF 281 >gi|261820150|ref|YP_003258256.1| 16S ribosomal RNA m2G1207 methyltransferase [Pectobacterium wasabiae WPP163] gi|261604163|gb|ACX86649.1| rRNA (guanine-N(2)-)-methyltransferase [Pectobacterium wasabiae WPP163] Length = 347 Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 2/75 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LD+ G G + L K+SP + D+S A+E +K+ N + + S+ +S Sbjct: 199 KVLDIACGAGVLASVLAKQSPKIRLTLSDVSAAAVESSKATLAANELEGA--VIASNVYS 256 Query: 160 SVEGLFDVIVSNPPY 174 ++G FDVIVSNPP+ Sbjct: 257 DIDGRFDVIVSNPPF 271 >gi|312602239|ref|YP_004022084.1| methyltransferase [Burkholderia rhizoxinica HKI 454] gi|312169553|emb|CBW76565.1| Methyltransferase [Burkholderia rhizoxinica HKI 454] Length = 365 Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 43/155 (27%), Positives = 69/155 (44%), Gaps = 20/155 (12%) Query: 75 RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134 +PE +D A E + +LD+G G+G + + L VG+D++ +A Sbjct: 123 QPEQLFFMDYTSA------EDLEQASVLDIGVGSGVLSIFCLLNGAT-SCVGLDVNPRAK 175 Query: 135 EIAKSNAVTNGVSERFDTL---QSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDF 190 +A NA+ N + + FD SD F+SV + FD I SNPP+ + Sbjct: 176 ILAGHNAILNHIDKNFDIRDGSTSDIFASVKDKQFDFICSNPPFEPT---------PPGI 226 Query: 191 DPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225 D ++ GI G+ I + +HL DG+ V Sbjct: 227 DYYVNSAAGIYGMDFAEKILSNIDQHLTDDGMLQV 261 >gi|19746163|ref|NP_607299.1| 16S rRNA m(2)G 1207 methyltransferase [Streptococcus pyogenes MGAS8232] gi|139473697|ref|YP_001128413.1| 16S rRNA m(2)G 1207 methyltransferase [Streptococcus pyogenes str. Manfredo] gi|209559499|ref|YP_002285971.1| hypothetical protein Spy49_0976c [Streptococcus pyogenes NZ131] gi|19748342|gb|AAL97798.1| conserved hypothetical protein [Streptococcus pyogenes MGAS8232] gi|134271944|emb|CAM30182.1| putative methyltransferase [Streptococcus pyogenes str. Manfredo] gi|209540700|gb|ACI61276.1| Conserved hypothetical protein [Streptococcus pyogenes NZ131] Length = 197 Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 31/93 (33%), Positives = 51/93 (54%), Gaps = 3/93 (3%) Query: 81 LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140 +VD L + ++ R+LDLG G G + ++L K VDI+ +AL++A+ N Sbjct: 41 MVDFGSQVLLETLNFKENERVLDLGCGYGPLGISLAKVQRV-DATLVDINNRALDLARKN 99 Query: 141 AVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173 A N V+ QS+ + ++ G F+ I+SNPP Sbjct: 100 ATNNQVA--VTIFQSNIYENISGHFEHIISNPP 130 >gi|323475067|gb|ADX85673.1| methyltransferase small [Sulfolobus islandicus REY15A] Length = 186 Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 29/75 (38%), Positives = 44/75 (58%), Gaps = 2/75 (2%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 + D+G G G + + L ++P K VD++ A+++AK NA NGV R L+SD F + Sbjct: 49 VADVGCGYGPIGIYLALKNPNLKVYMVDVNYIAIKLAKKNAKFNGVENRTIILKSDIFDN 108 Query: 161 --VEGLFDVIVSNPP 173 V+ F+ I SNPP Sbjct: 109 VPVDVKFNAIYSNPP 123 >gi|242240726|ref|YP_002988907.1| 16S ribosomal RNA m2G1207 methyltransferase [Dickeya dadantii Ech703] gi|242132783|gb|ACS87085.1| rRNA (guanine-N(2)-)-methyltransferase [Dickeya dadantii Ech703] Length = 344 Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 35/140 (25%), Positives = 60/140 (42%), Gaps = 23/140 (16%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 +D+ L +E ++LD+ G G + + SP + D+S ALE +++ Sbjct: 181 LDAGSQLLLSTLEAHRKGKVLDIACGAGVLASVFAQRSPKIRLTLSDVSAAALEASQATL 240 Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201 +N + + L S+ +S + G FD+I+SNPP+ DG Sbjct: 241 ASNQLEGQ--VLASNVYSDIVGRFDLIISNPPF---------------------HDGMQT 277 Query: 202 GLSHYRTIADGVSRHLNKDG 221 L + G + HLN+DG Sbjct: 278 SLHAAEMLIRGAASHLNQDG 297 >gi|167763063|ref|ZP_02435190.1| hypothetical protein BACSTE_01429 [Bacteroides stercoris ATCC 43183] gi|167699403|gb|EDS15982.1| hypothetical protein BACSTE_01429 [Bacteroides stercoris ATCC 43183] Length = 236 Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 30/80 (37%), Positives = 44/80 (55%), Gaps = 1/80 (1%) Query: 96 RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155 +DV RILD+G G+G + L L + +P V+I A A+ N ++ S R + + Sbjct: 36 QDVKRILDVGAGSGLISLQLAQRNPEAVITSVEIDPAAAAQAQENIQSSPWSNRMEVVCC 95 Query: 156 DWFS-SVEGLFDVIVSNPPY 174 D+ E FD+IVSNPPY Sbjct: 96 DFRKYHPEDKFDLIVSNPPY 115 >gi|167465651|ref|ZP_02330740.1| possible 16S rRNA methyltransferase [Paenibacillus larvae subsp. larvae BRL-230010] Length = 171 Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 32/76 (42%), Positives = 44/76 (57%), Gaps = 2/76 (2%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 RILD+G G G + L K P +DI+ +A+E+AK NA N +S LQS+ F Sbjct: 59 ARILDVGCGYGPIGLTAAKLCPAGHVTLIDINERAVELAKLNARNNHISN-VTILQSNLF 117 Query: 159 SSV-EGLFDVIVSNPP 173 V + FDVI++NPP Sbjct: 118 EHVRDQKFDVILTNPP 133 >gi|160873960|ref|YP_001553276.1| rRNA (guanine-N(2)-)-methyltransferase [Shewanella baltica OS195] gi|226712990|sp|A9L1V0|RSMC_SHEB9 RecName: Full=Ribosomal RNA small subunit methyltransferase C; AltName: Full=16S rRNA m2G1207 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rsmC gi|160859482|gb|ABX48016.1| rRNA (guanine-N(2)-)-methyltransferase [Shewanella baltica OS195] gi|315266194|gb|ADT93047.1| methyltransferase small [Shewanella baltica OS678] Length = 347 Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 27/75 (36%), Positives = 38/75 (50%), Gaps = 2/75 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+LD G G G + ALLK P VDI+ AL + NG++ + SD + Sbjct: 209 RVLDFGCGAGVIAAALLKAQPSLSLECVDINAMALASCELTLAANGMTAK--VYPSDGLA 266 Query: 160 SVEGLFDVIVSNPPY 174 G F+ I+SNPP+ Sbjct: 267 QTTGKFNGIISNPPF 281 >gi|329925612|ref|ZP_08280453.1| methyltransferase small domain protein [Paenibacillus sp. HGF5] gi|328939741|gb|EGG36083.1| methyltransferase small domain protein [Paenibacillus sp. HGF5] Length = 201 Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 28/76 (36%), Positives = 46/76 (60%), Gaps = 2/76 (2%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 ++LD+G G G + L + + +DI+ +A+E+AK NA NG+ L+SD F Sbjct: 60 AQVLDVGCGYGPIGLTAARMASQGHVTMIDINSRAVELAKENAKRNGII-NVTILESDLF 118 Query: 159 SSV-EGLFDVIVSNPP 173 +V + LFDV+++NPP Sbjct: 119 EAVKDQLFDVVLTNPP 134 >gi|291302530|ref|YP_003513808.1| methyltransferase small [Stackebrandtia nassauensis DSM 44728] gi|290571750|gb|ADD44715.1| methyltransferase small [Stackebrandtia nassauensis DSM 44728] Length = 481 Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 34/82 (41%), Positives = 45/82 (54%), Gaps = 5/82 (6%) Query: 95 KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154 +R V LD+GTG G + L + + G DIS +AL A +NAV NG+ ++ L Sbjct: 145 RRPVESALDVGTGGGVLAFDLSGHAK--RVTGTDISRRALLFAATNAVLNGLD--WELLA 200 Query: 155 SDWFSSVEG-LFDVIVSNPPYI 175 D V G FD IVSNPP+I Sbjct: 201 GDMLEPVAGRRFDQIVSNPPFI 222 >gi|299065279|emb|CBJ36447.1| putative methyltransferase, Methylase of polypeptide chain release factors [Ralstonia solanacearum CMR15] Length = 374 Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 35/104 (33%), Positives = 55/104 (52%), Gaps = 4/104 (3%) Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162 D+GTGTG V A+L + + VG D +AL A N G+ + + +++D F E Sbjct: 201 DIGTGTG-VLAAVLAKRGVKRVVGTDQDARALACAHENLTRLGLQSQVEVIEADLFP--E 257 Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206 G +IV NPP++ + + V D D R+ L G +DGL+ + Sbjct: 258 GRAPLIVCNPPWLPARPSSPIERAVYDPDSRM-LRGFLDGLAAH 300 >gi|257866490|ref|ZP_05646143.1| rRNA small subunit methyltransferase C [Enterococcus casseliflavus EC30] gi|257872995|ref|ZP_05652648.1| rRNA small subunit methyltransferase C [Enterococcus casseliflavus EC10] gi|257800448|gb|EEV29476.1| rRNA small subunit methyltransferase C [Enterococcus casseliflavus EC30] gi|257807159|gb|EEV35981.1| rRNA small subunit methyltransferase C [Enterococcus casseliflavus EC10] Length = 203 Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 31/76 (40%), Positives = 42/76 (55%), Gaps = 3/76 (3%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 RILDLG G G V + L K P DIS A+++ NA N V+ + + S+ F Sbjct: 43 RILDLGCGYGFVGIYLAKRYPEAAVTMTDISANAIDLTTKNAQRNDVAP--EIVLSEGFK 100 Query: 160 SV-EGLFDVIVSNPPY 174 + + FDVI+SNPPY Sbjct: 101 EISDKTFDVILSNPPY 116 >gi|300702626|ref|YP_003744226.1| methyltransferase [Ralstonia solanacearum CFBP2957] gi|299070287|emb|CBJ41579.1| putative methyltransferase, Methylase of polypeptide chain release factors [Ralstonia solanacearum CFBP2957] Length = 390 Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 35/104 (33%), Positives = 55/104 (52%), Gaps = 4/104 (3%) Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162 D+GTGTG V A+L + + VG D +AL A+ N G+ + + + +D F E Sbjct: 217 DIGTGTG-VLAAVLAKRGVKRVVGTDQDARALACARENLARLGLQSQVEVIDADLFP--E 273 Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206 G +IV NPP++ + + V D D R+ L G +DGL+ + Sbjct: 274 GRAPLIVCNPPWLPARPSSPIERAVYDPDSRM-LRGFLDGLAAH 316 >gi|296109907|ref|YP_003616856.1| methyltransferase small [Methanocaldococcus infernus ME] gi|295434721|gb|ADG13892.1| methyltransferase small [Methanocaldococcus infernus ME] Length = 196 Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 34/95 (35%), Positives = 50/95 (52%), Gaps = 9/95 (9%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 +D + +E ILDLG G GA+ +AL E K + VDI+ +AL++AK N Sbjct: 40 IDKGTKLLIETVEVNKEDEILDLGCGYGAIGIALADEVK--KVLMVDINRRALKLAKENV 97 Query: 142 VTNGVSE---RFDTLQSDWFSSVEGLFDVIVSNPP 173 N + RF SD + +V+ FD I++NPP Sbjct: 98 KLNNIKNAEVRF----SDLYENVDEKFDKIITNPP 128 >gi|145297572|ref|YP_001140413.1| ribosomal RNA small subunit methyltransferase C [Aeromonas salmonicida subsp. salmonicida A449] gi|226712987|sp|A4SIE3|RSMC_AERS4 RecName: Full=Ribosomal RNA small subunit methyltransferase C; AltName: Full=16S rRNA m2G1207 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rsmC gi|142850344|gb|ABO88665.1| ribosomal RNA small subunit methyltransferase C [Aeromonas salmonicida subsp. salmonicida A449] Length = 342 Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 29/75 (38%), Positives = 40/75 (53%), Gaps = 2/75 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 +LD G G G + L K +P + VDIS ALE ++ NG+ + SD +S Sbjct: 205 ELLDFGCGAGVIGSVLAKRNPGLEVKMVDISALALESSRRTLAINGLQGQVQA--SDVYS 262 Query: 160 SVEGLFDVIVSNPPY 174 + G FD IVSNPP+ Sbjct: 263 DITGKFDHIVSNPPF 277 >gi|327394850|dbj|BAK12272.1| O-methyltransferase YfiC [Pantoea ananatis AJ13355] Length = 311 Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 4/87 (4%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 V RILD+GTG+G + L L + +P V V++ A + A N + + R Q D Sbjct: 110 VKRILDIGTGSGLIALMLAQRTPSNVDVDAVELDPDAAQQAHENIQQSPWAARMQVHQQD 169 Query: 157 ---WFSSVEGLFDVIVSNPPYIESVIV 180 W + E + +IVSNPPY + + Sbjct: 170 IAQWAENCEARYSLIVSNPPYFDPGVA 196 >gi|312961598|ref|ZP_07776097.1| methyltransferase small [Pseudomonas fluorescens WH6] gi|311284139|gb|EFQ62721.1| methyltransferase small [Pseudomonas fluorescens WH6] Length = 314 Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 1/74 (1%) Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 +D+G G G L + + + + VDI+ +AL ++ NA G+S QSD +S+ Sbjct: 139 VDIGCGAGVGALVIAQARHDAQVLAVDINPRALRMSAVNAELAGLSN-VRVYQSDLLASL 197 Query: 162 EGLFDVIVSNPPYI 175 +G FD+IV+NPPY+ Sbjct: 198 DGTFDLIVANPPYM 211 >gi|293392981|ref|ZP_06637298.1| conserved hypothetical protein [Serratia odorifera DSM 4582] gi|291424515|gb|EFE97727.1| conserved hypothetical protein [Serratia odorifera DSM 4582] Length = 290 Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 27/106 (25%), Positives = 54/106 (50%), Gaps = 2/106 (1%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 +D + L ++K ++LD+G G G + + + SP K D++ A+E +++ Sbjct: 123 LDVGSSLLLSTLDKHMKGKVLDVGCGAGVMASVMARMSPKVKLTLSDVNAAAIESSRATL 182 Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEV 187 NG+ + + S+ +S + G FD+I+SNPP+ + + E Sbjct: 183 AANGIDG--EVIVSNVYSDISGRFDMIISNPPFHDGLATSLTAAET 226 >gi|260592206|ref|ZP_05857664.1| methyltransferase [Prevotella veroralis F0319] gi|260535840|gb|EEX18457.1| methyltransferase [Prevotella veroralis F0319] Length = 237 Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 8/84 (9%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD-- 156 +RILD+GTGTG + L + + P ++I KALE A N ++ +R + S Sbjct: 34 MRILDIGTGTGLIALMMAQRFPQAHIDAIEIDPKALEDAHVNIESSPFHDRIKLIHSSLQ 93 Query: 157 ------WFSSVEGLFDVIVSNPPY 174 + +V+ ++D I+SNPPY Sbjct: 94 YYKPSLFPPNVDNVYDAIISNPPY 117 >gi|237809368|ref|YP_002893808.1| rRNA (guanine-N(2)-)-methyltransferase [Tolumonas auensis DSM 9187] gi|237501629|gb|ACQ94222.1| rRNA (guanine-N(2)-)-methyltransferase [Tolumonas auensis DSM 9187] Length = 350 Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 35/97 (36%), Positives = 49/97 (50%), Gaps = 11/97 (11%) Query: 78 TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137 T+LL+DS A S ILD+G G G + A+ + +P V D++ AL A Sbjct: 201 TQLLLDSLPALS---------GDILDVGCGAGVIGAAICQRTPDANVVMTDVNALALLSA 251 Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174 N +S + + SD FS VE FD I+SNPP+ Sbjct: 252 TKTLEGNNLSAQ--VIASDMFSDVEAKFDFIISNPPF 286 >gi|17547878|ref|NP_521280.1| hypothetical protein RSc3159 [Ralstonia solanacearum GMI1000] gi|17430184|emb|CAD16947.1| conserved hypothetical protein 1177;methyltransferase small [Ralstonia solanacearum GMI1000] Length = 376 Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 35/104 (33%), Positives = 55/104 (52%), Gaps = 4/104 (3%) Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162 D+GTGTG V A+L + + VG D +AL A N G+ + + +++D F E Sbjct: 203 DIGTGTG-VLAAVLAKRGVKRVVGTDQDARALACAHENLTRLGLQSQVEVIEADLFP--E 259 Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206 G +IV NPP++ + + V D D R+ L G +DGL+ + Sbjct: 260 GRAPLIVCNPPWLPARPSSPIERAVYDPDSRM-LRGFLDGLAAH 302 >gi|289523383|ref|ZP_06440237.1| putative N-6 adenine-specific DNA methylase [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289503075|gb|EFD24239.1| putative N-6 adenine-specific DNA methylase [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 247 Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 34/101 (33%), Positives = 55/101 (54%), Gaps = 7/101 (6%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSN 140 VD+ L R+ +D R+++LGT +GAV L L K + G+DI + +EIA+ N Sbjct: 30 VDTVLLSWFVRLRSKD--RVMELGTASGAVALILAKRWQKVSAIKGIDIQEELIEIAREN 87 Query: 141 AVTNGVSERFDTLQSD--WFSSV--EGLFDVIVSNPPYIES 177 A+ N + ++ + D S++ FD +V NPPY E+ Sbjct: 88 ALANDLEDKVTFERGDVREISAICPPQTFDAVVVNPPYDEA 128 >gi|218778577|ref|YP_002429895.1| methyltransferase small [Desulfatibacillum alkenivorans AK-01] gi|218759961|gb|ACL02427.1| methyltransferase small [Desulfatibacillum alkenivorans AK-01] Length = 251 Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 30/78 (38%), Positives = 42/78 (53%), Gaps = 4/78 (5%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 I+DLGTG G + L L P K GV+I +A+ N NG+ +R ++ D S Sbjct: 52 IVDLGTGAGVIPLILTSLYPDIKVYGVEIQDSLAGLAERNVRENGLQDRISVIRHDLKKS 111 Query: 161 -VEGL---FDVIVSNPPY 174 ++GL D +VSNPPY Sbjct: 112 PIQGLPKNIDYVVSNPPY 129 >gi|72160642|ref|YP_288299.1| hypothetical protein Tfu_0238 [Thermobifida fusca YX] gi|71914374|gb|AAZ54276.1| conserved hypothetical protein [Thermobifida fusca YX] Length = 494 Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 41/140 (29%), Positives = 69/140 (49%), Gaps = 10/140 (7%) Query: 43 VRSLKHESIHRILGW-----RDFYNVR-LTLSSDTFEPRPETELLVDSALAFSLPRIEKR 96 +R + ++ +I W R +Y V LT+ +PRP+ + A A I Sbjct: 94 IRDGQARALVQIKPWELADGRPYYTVSDLTVRPGQGQPRPDHVVGAGGASATLAQLIVDG 153 Query: 97 DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 V R LDLG+G G L L + + + D++ +AL + + + +GV + +T Q Sbjct: 154 PVERALDLGSGCGVQSLHLAERA--TRVCATDVNPRALWMTRLSCALSGV-DNVETRQGS 210 Query: 157 WFSSVEG-LFDVIVSNPPYI 175 + V+G FD+IVSNPP++ Sbjct: 211 LYEPVQGERFDLIVSNPPFV 230 >gi|172040386|ref|YP_001800100.1| methylase of peptide chain release factors [Corynebacterium urealyticum DSM 7109] gi|171851690|emb|CAQ04666.1| methylase of peptide chain release factors [Corynebacterium urealyticum DSM 7109] Length = 332 Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 46/185 (24%), Positives = 78/185 (42%), Gaps = 41/185 (22%) Query: 32 DRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL----- 86 D + + ++R E + I+G F+ L + F PRPETELL + AL Sbjct: 59 DPEPAIFADWVIRRAHREPLQHIVGAAPFFGYDLFSDARGFIPRPETELLTEYALGRIRS 118 Query: 87 ----AFSLPRIEKRD-VVRILDLGTGTGAVCLALLKE-SPFFKG---------------- 124 A + P + D +VRI+DL G G + LAL + + F +G Sbjct: 119 WLERAAAEPDLRPADGIVRIVDLCAGPGTIGLALAAQLTEFLRGQATASSADYRWLRTVE 178 Query: 125 -VGVDISCKALEIAKSNAV----TNGVSERFDT--LQSDWFS-------SVEGLFDVIVS 170 G+++ A+E+ + N + E+ D ++ D + G ++V+ Sbjct: 179 ATGIELDPAAVELGQENLAYFRRAGLLGEQLDVRLVEGDVRDLEVLDTLGLAGRAQLVVA 238 Query: 171 NPPYI 175 NPPY+ Sbjct: 239 NPPYV 243 >gi|291618454|ref|YP_003521196.1| YfiC [Pantoea ananatis LMG 20103] gi|291153484|gb|ADD78068.1| YfiC [Pantoea ananatis LMG 20103] Length = 311 Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 4/87 (4%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 V RILD+GTG+G + L L + +P V V++ A + A N + + R Q D Sbjct: 110 VKRILDIGTGSGLIALMLAQRTPSNVDVDAVELDPDAAQQAHENIQQSPWAARMQVHQQD 169 Query: 157 ---WFSSVEGLFDVIVSNPPYIESVIV 180 W + E + +IVSNPPY + + Sbjct: 170 IAQWAENCEARYSLIVSNPPYFDPGVA 196 >gi|255094437|ref|ZP_05323915.1| protein methyltransferase [Clostridium difficile CIP 107932] Length = 151 Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 39/131 (29%), Positives = 62/131 (47%), Gaps = 4/131 (3%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L + G+ + ++ + L + Q+ L I I+ R+F + Sbjct: 24 DTELLLQKTLGVDRLYIHLNLNKELTEEQKTKFMGFAEERLNGRPIAYIVENREFMGLDF 83 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 + PRP+TE LV+ + EK+DV ILD+GTG+GA+ ++L K K + Sbjct: 84 FVKEGVLIPRPDTETLVEEIIEICR---EKKDV-SILDIGTGSGAITISLAKYIENSKIM 139 Query: 126 GVDISCKALEI 136 DIS ALEI Sbjct: 140 SFDISETALEI 150 >gi|295102911|emb|CBL00456.1| [LSU ribosomal protein L11P]-lysine N-methyltransferase [Faecalibacterium prausnitzii L2-6] Length = 304 Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 38/134 (28%), Positives = 58/134 (43%), Gaps = 19/134 (14%) Query: 56 GWRDFYNVRLTLSSDTFEPRPE------TELLVDSALAFSLPRIEKRDVV---------- 99 GWR +Y+ P + +L++D LAF E ++ Sbjct: 108 GWRKYYHPMDVGQRLAIVPSWQDYDTDRVKLILDPGLAFGTGGHETTNLCLEVLDERVKG 167 Query: 100 --RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 R+LD+GTG+G + +A LK GVDI A+ A NA NGV+++ L D Sbjct: 168 GERVLDIGTGSGILAIAALKLGAAV-AEGVDIDPVAVRTAGENAALNGVADKLTVLVGDL 226 Query: 158 FSSVEGLFDVIVSN 171 G +D+I +N Sbjct: 227 SDKASGKYDIITAN 240 >gi|282857422|ref|ZP_06266655.1| methyltransferase [Pyramidobacter piscolens W5455] gi|282584707|gb|EFB90042.1| methyltransferase [Pyramidobacter piscolens W5455] Length = 255 Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 30/83 (36%), Positives = 44/83 (53%), Gaps = 4/83 (4%) Query: 96 RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS--ERFDT- 152 R R+++LG G V L L K P + G+DI + +E+A+ NA NG++ RF+T Sbjct: 49 RPGERVIELGCAHGGVSLILAKRFPHSRFEGLDIQPRLIELARENAARNGLTANARFETG 108 Query: 153 -LQSDWFSSVEGLFDVIVSNPPY 174 L+ FD +V NPPY Sbjct: 109 DLREHRRLYEHQSFDAVVVNPPY 131 >gi|260584234|ref|ZP_05851982.1| methyltransferase [Granulicatella elegans ATCC 700633] gi|260158860|gb|EEW93928.1| methyltransferase [Granulicatella elegans ATCC 700633] Length = 202 Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 31/97 (31%), Positives = 56/97 (57%), Gaps = 7/97 (7%) Query: 78 TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137 +ELL++S + +P E+ +LD+G G G + LA K P +D++ +A+ +A Sbjct: 46 SELLIES---YDVP--EQFQKASLLDIGCGYGTMGLAYGKAYPELSVEMIDVNERAILLA 100 Query: 138 KSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPP 173 K NA NG+ D +S+ + +V + +++I+SNPP Sbjct: 101 KENAQKNGI-HNVDIHESNLYDAVKKSQYEIIISNPP 136 >gi|95930758|ref|ZP_01313491.1| methyltransferase small [Desulfuromonas acetoxidans DSM 684] gi|95133238|gb|EAT14904.1| methyltransferase small [Desulfuromonas acetoxidans DSM 684] Length = 272 Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 32/111 (28%), Positives = 53/111 (47%), Gaps = 5/111 (4%) Query: 67 LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126 L D + R +D L R +R+ R++DLG G+ + L L + P V Sbjct: 30 LGVDIVQHRDGYRFSIDPVLLTDFCRPRQRE--RVVDLGCGSAVMALILARAFPSLSVVA 87 Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWF---SSVEGLFDVIVSNPPY 174 +++ + A+ + V NG+ R D Q+D S+ G FD++V NPP+ Sbjct: 88 LELQAAQVARARKSVVLNGLEGRIDVQQTDVREVPSAWHGDFDLVVCNPPF 138 >gi|25028365|ref|NP_738419.1| hypothetical protein CE1809 [Corynebacterium efficiens YS-314] gi|23493650|dbj|BAC18619.1| conserved hypothetical protein [Corynebacterium efficiens YS-314] Length = 523 Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 48/163 (29%), Positives = 74/163 (45%), Gaps = 11/163 (6%) Query: 74 PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133 P P+ L V +A L R+LDLGTG+G L + DI +A Sbjct: 147 PGPDHVLGVGAASLSLLQATPVSPTGRVLDLGTGSGIQVLGQAGSTTSI--TATDIHPRA 204 Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDP 192 L+ A++ V +G+ + L+ WF V G FD I++NPP++ V +G RD Sbjct: 205 LDFAEATLVDSGIP--VELLEGSWFDPVSGRDFDRIIANPPFV--VGPPEIGHVYRDSG- 259 Query: 193 RISLDGGIDGLSHY--RTIADGVSRHLNKDGLCSVEIGYNQKV 233 + LDG + R +A G + HL + S + + Q+V Sbjct: 260 -MDLDGATRLVVEQACRHLAPGGTAHLLGAWVHSTGMSWQQRV 301 >gi|259507422|ref|ZP_05750322.1| rRNA or tRNA methylase [Corynebacterium efficiens YS-314] gi|259164987|gb|EEW49541.1| rRNA or tRNA methylase [Corynebacterium efficiens YS-314] Length = 515 Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 48/163 (29%), Positives = 74/163 (45%), Gaps = 11/163 (6%) Query: 74 PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133 P P+ L V +A L R+LDLGTG+G L + DI +A Sbjct: 139 PGPDHVLGVGAASLSLLQATPVSPTGRVLDLGTGSGIQVLGQAGSTTSI--TATDIHPRA 196 Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDP 192 L+ A++ V +G+ + L+ WF V G FD I++NPP++ V +G RD Sbjct: 197 LDFAEATLVDSGIP--VELLEGSWFDPVSGRDFDRIIANPPFV--VGPPEIGHVYRDSG- 251 Query: 193 RISLDGGIDGLSHY--RTIADGVSRHLNKDGLCSVEIGYNQKV 233 + LDG + R +A G + HL + S + + Q+V Sbjct: 252 -MDLDGATRLVVEQACRHLAPGGTAHLLGAWVHSTGMSWQQRV 293 >gi|261417598|ref|YP_003251280.1| methyltransferase small [Geobacillus sp. Y412MC61] gi|261374055|gb|ACX76798.1| methyltransferase small [Geobacillus sp. Y412MC61] Length = 202 Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 39/117 (33%), Positives = 58/117 (49%), Gaps = 12/117 (10%) Query: 61 YNVRLTLSSDTFEPRP---ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117 + R T S F R T LL+++ F P + +LD+G G G + LAL K Sbjct: 28 HEFRFTTDSGVFSKREVDFGTRLLIET---FEEPGV----AGDLLDVGCGYGPIGLALAK 80 Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPP 173 P + +D++ +ALE+A+ N NG+ +SD FS V E F +V+NPP Sbjct: 81 SFPNRRVHMIDVNERALELAQENKQANGIDNAV-IYKSDLFSEVGEQRFAAVVTNPP 136 >gi|193204212|ref|NP_494209.2| hypothetical protein C33C12.9 [Caenorhabditis elegans] gi|163644445|gb|AAB66061.3| Hypothetical protein C33C12.9 [Caenorhabditis elegans] Length = 221 Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 34/121 (28%), Positives = 63/121 (52%), Gaps = 7/121 (5%) Query: 61 YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE-S 119 Y ++ + D +EP +T LL+D A+ + I RD +L++G G+G V + + Sbjct: 8 YRLQAIRAHDVYEPAEDTFLLID-AIEKDIKEIRSRDPKLVLEIGCGSGVVSTFVNQALG 66 Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF---DVIVSNPPYIE 176 V D++ AL++ A N + + D +++D F+ +E L DV++ NPPY+ Sbjct: 67 GNVTSVATDLNPHALDVTLETAKLNDI--KIDVVRTDLFAGLENLLGKVDVLLFNPPYVP 124 Query: 177 S 177 + Sbjct: 125 T 125 >gi|323339961|ref|ZP_08080228.1| protein-(glutamine-N5) methyltransferase [Lactobacillus ruminis ATCC 25644] gi|323092603|gb|EFZ35208.1| protein-(glutamine-N5) methyltransferase [Lactobacillus ruminis ATCC 25644] Length = 159 Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 31/79 (39%), Positives = 45/79 (56%), Gaps = 5/79 (6%) Query: 60 FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119 F+ ++ T PR ETE LV+ L + P + LD+GTG+GA+ L L E Sbjct: 81 FFKRTFFVNESTLIPRVETEDLVEWILHDN-PGAD----AEFLDIGTGSGAIGLTLKAEK 135 Query: 120 PFFKGVGVDISCKALEIAK 138 P +KG+ D+S +ALE+AK Sbjct: 136 PLWKGMLSDVSSEALEVAK 154 >gi|302348250|ref|YP_003815888.1| Putative methyltransferase [Acidilobus saccharovorans 345-15] gi|302328662|gb|ADL18857.1| Putative methyltransferase [Acidilobus saccharovorans 345-15] Length = 207 Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 39/127 (30%), Positives = 62/127 (48%), Gaps = 12/127 (9%) Query: 55 LGWRDFYN----VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110 L W D +R+ LS +EP ++ L +D+ + + R +LDLGTG+G Sbjct: 4 LRWADITTAAGRLRVALSRCVYEPSDDSLLAIDAMVKL---KEMGRTYEAVLDLGTGSGV 60 Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170 + LA L + V VDIS A+E A++ + +Q D + G +D+I+ Sbjct: 61 LALASLLLFRPRRLVAVDISPYAVECARATLGPDAA-----VIQCDGARCLSGGWDLIIL 115 Query: 171 NPPYIES 177 NPPY+ S Sbjct: 116 NPPYLPS 122 >gi|269796895|ref|YP_003316350.1| 16S rRNA m(2)G 1207 methyltransferase [Sanguibacter keddieii DSM 10542] gi|269099080|gb|ACZ23516.1| 16S rRNA m(2)G 1207 methyltransferase [Sanguibacter keddieii DSM 10542] Length = 394 Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 4/90 (4%) Query: 94 EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153 E RD V DLG GTG + L + P + V D S A+ + A NGV +R L Sbjct: 247 EARDAV---DLGCGTGVLATVLARSRPGLRVVASDQSAAAVASTLATAGANGVGDRVTGL 303 Query: 154 QSDWFSSV-EGLFDVIVSNPPYIESVIVDC 182 + D S++ + D++V NPP+ E ++ Sbjct: 304 RDDALSTLPDASADLVVCNPPFHEGTTLET 333 >gi|88854950|ref|ZP_01129616.1| hypothetical protein A20C1_08803 [marine actinobacterium PHSC20C1] gi|88816111|gb|EAR25967.1| hypothetical protein A20C1_08803 [marine actinobacterium PHSC20C1] Length = 378 Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 32/100 (32%), Positives = 47/100 (47%), Gaps = 3/100 (3%) Query: 90 LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 LP + K D R +DLG+GTG + +L P V +D S A+ + A NGV R Sbjct: 228 LPEM-KSDAARAIDLGSGTGVLATSLAVARPKLSVVAIDQSTAAVASTRETADANGVGAR 286 Query: 150 FDTLQSDWFSS-VEGLFDVIVSNPPYIESVIVDCLGLEVR 188 + + D + D+IV NPP+ V G+ +R Sbjct: 287 VEAAREDALTERPTASADLIVCNPPFHTGATVHA-GVALR 325 >gi|307324542|ref|ZP_07603749.1| methyltransferase small [Streptomyces violaceusniger Tu 4113] gi|306889786|gb|EFN20765.1| methyltransferase small [Streptomyces violaceusniger Tu 4113] Length = 343 Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 35/119 (29%), Positives = 56/119 (47%), Gaps = 14/119 (11%) Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162 D+GTGTG V A+L + V D +AL A+ NA G+S+R + +++D + Sbjct: 170 DIGTGTG-VLAAVLARRGIRRVVATDQDARALGCARENAARLGLSDRIEVVEADLYPP-- 226 Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221 G ++V NPP++ + L V D R+ R +G++ HL DG Sbjct: 227 GRAPLVVCNPPWVPARPSSPLEYAVYDPSSRM-----------LRGFLNGLAGHLTPDG 274 >gi|297528473|ref|YP_003669748.1| methyltransferase small [Geobacillus sp. C56-T3] gi|319765256|ref|YP_004130757.1| methyltransferase small [Geobacillus sp. Y412MC52] gi|297251725|gb|ADI25171.1| methyltransferase small [Geobacillus sp. C56-T3] gi|317110122|gb|ADU92614.1| methyltransferase small [Geobacillus sp. Y412MC52] Length = 200 Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 39/117 (33%), Positives = 58/117 (49%), Gaps = 12/117 (10%) Query: 61 YNVRLTLSSDTFEPRP---ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117 + R T S F R T LL+++ F P + +LD+G G G + LAL K Sbjct: 26 HEFRFTTDSGVFSKREVDFGTRLLIET---FEEPGV----AGDLLDVGCGYGPIGLALAK 78 Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPP 173 P + +D++ +ALE+A+ N NG+ +SD FS V E F +V+NPP Sbjct: 79 SFPNRRVHMIDVNERALELAQENKQANGIDNAV-IYKSDLFSEVGEQRFAAVVTNPP 134 >gi|56418632|ref|YP_145950.1| hypothetical protein GK0097 [Geobacillus kaustophilus HTA426] gi|56378474|dbj|BAD74382.1| hypothetical conserved protein [Geobacillus kaustophilus HTA426] Length = 261 Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 39/117 (33%), Positives = 58/117 (49%), Gaps = 12/117 (10%) Query: 61 YNVRLTLSSDTFEPRP---ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117 + R T S F R T LL+++ F P + +LD+G G G + LAL K Sbjct: 87 HEFRFTTDSGVFSKREVDFGTRLLIET---FEEPGV----AGDLLDVGCGYGPIGLALAK 139 Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPP 173 P + +D++ +ALE+A+ N NG+ +SD FS V E F +V+NPP Sbjct: 140 SFPNRRVHMIDVNERALELAQENKQANGIDNAV-IYKSDLFSEVGEQRFAAVVTNPP 195 >gi|319939041|ref|ZP_08013405.1| methyltransferase domain-containing protein [Streptococcus anginosus 1_2_62CV] gi|319812091|gb|EFW08357.1| methyltransferase domain-containing protein [Streptococcus anginosus 1_2_62CV] Length = 197 Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 29/73 (39%), Positives = 43/73 (58%), Gaps = 3/73 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LD+G G G + L L+K + VDI+ +AL++A+ NA N V QS+ + + Sbjct: 61 VLDVGCGYGTLGLTLVKAKEV-EATLVDINQRALDLARQNAERNQVLATI--FQSNLYQN 117 Query: 161 VEGLFDVIVSNPP 173 VEG F I+SNPP Sbjct: 118 VEGRFHHIISNPP 130 >gi|251793532|ref|YP_003008261.1| phosphatidylserine synthase [Aggregatibacter aphrophilus NJ8700] gi|262827860|sp|C6AQR4|TRMN6_AGGAN RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName: Full=tRNA m6A37 methyltransferase gi|247534928|gb|ACS98174.1| phosphatidylserine synthase [Aggregatibacter aphrophilus NJ8700] Length = 234 Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 4/85 (4%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD-- 156 +ILDLG+G+G + L L + S + V+I A + A+ NA+ + E+ Q D Sbjct: 40 QILDLGSGSGLIALMLAQRSSAESRICAVEIDPAAAQQARENALASPWKEKIQVYQQDID 99 Query: 157 -WFSSVEGLFDVIVSNPPYIESVIV 180 + + FD+IV+NPPY E+ I Sbjct: 100 SFCTQTAQRFDLIVANPPYFEAGIA 124 >gi|153815173|ref|ZP_01967841.1| hypothetical protein RUMTOR_01405 [Ruminococcus torques ATCC 27756] gi|317502368|ref|ZP_07960534.1| SAM-dependent methyltransferase [Lachnospiraceae bacterium 8_1_57FAA] gi|331089969|ref|ZP_08338860.1| hypothetical protein HMPREF1025_02443 [Lachnospiraceae bacterium 3_1_46FAA] gi|145847432|gb|EDK24350.1| hypothetical protein RUMTOR_01405 [Ruminococcus torques ATCC 27756] gi|316896241|gb|EFV18346.1| SAM-dependent methyltransferase [Lachnospiraceae bacterium 8_1_57FAA] gi|330403107|gb|EGG82670.1| hypothetical protein HMPREF1025_02443 [Lachnospiraceae bacterium 3_1_46FAA] Length = 237 Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 26/80 (32%), Positives = 44/80 (55%), Gaps = 4/80 (5%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R LDLGTG G + + L +++ G++I + E+A+ + NG+ ++ D + D Sbjct: 55 RALDLGTGNGIIPILLSEKTQGRHFTGLEIQPEMAEMARRSVDYNGLEDKVDIVTGDIKE 114 Query: 160 SVE----GLFDVIVSNPPYI 175 + E FDVI +NPPY+ Sbjct: 115 AAEIFKPAFFDVITTNPPYM 134 >gi|289167734|ref|YP_003446003.1| 16S RNA G1207 methylase RsmC [Streptococcus mitis B6] gi|288907301|emb|CBJ22137.1| 16S RNA G1207 methylase RsmC [Streptococcus mitis B6] Length = 196 Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 28/73 (38%), Positives = 43/73 (58%), Gaps = 3/73 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LD+G G G + L+L K + VDI+ +AL++A+ NA N V QS+ + Sbjct: 61 VLDVGCGYGPLGLSLAKAYEV-QSTMVDINNRALDLARQNAERNKVEATI--FQSNIYEQ 117 Query: 161 VEGLFDVIVSNPP 173 V+G FD ++SNPP Sbjct: 118 VKGTFDHVISNPP 130 >gi|290890963|ref|ZP_06554027.1| hypothetical protein AWRIB429_1417 [Oenococcus oeni AWRIB429] gi|290479362|gb|EFD88022.1| hypothetical protein AWRIB429_1417 [Oenococcus oeni AWRIB429] Length = 204 Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 28/74 (37%), Positives = 43/74 (58%), Gaps = 2/74 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 +ILDLGTG G V ++L P K VD++ ++L +AK+N N S + QS+ + Sbjct: 67 KILDLGTGYGPVGISLKALKPDLKIDMVDVNQRSLNLAKNNLELNDFSA--NVFQSNIYE 124 Query: 160 SVEGLFDVIVSNPP 173 +V G + I+ NPP Sbjct: 125 NVTGSYAAIIVNPP 138 >gi|116491397|ref|YP_810941.1| 16S RNA G1207 methylase RsmC [Oenococcus oeni PSU-1] gi|116092122|gb|ABJ57276.1| 16S rRNA m(2)G 1207 methyltransferase [Oenococcus oeni PSU-1] Length = 204 Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 28/74 (37%), Positives = 43/74 (58%), Gaps = 2/74 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 +ILDLGTG G V ++L P K VD++ ++L +AK+N N S + QS+ + Sbjct: 67 KILDLGTGYGPVGISLKALKPDLKIDMVDVNQRSLNLAKNNLELNDFSA--NVFQSNIYE 124 Query: 160 SVEGLFDVIVSNPP 173 +V G + I+ NPP Sbjct: 125 NVTGSYAAIIVNPP 138 >gi|114565621|ref|YP_752775.1| SAM-dependent methyltransferases [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|114336556|gb|ABI67404.1| SAM-dependent methyltransferases [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 251 Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 31/107 (28%), Positives = 55/107 (51%), Gaps = 6/107 (5%) Query: 72 FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131 F+ R +D+ L P ++ + + +DLGTG G + L L +P + G++I Sbjct: 26 FQSREGYRFSLDAILLAHFPVLD--GIKQAVDLGTGNGVIALLLAYRAPSLRVTGIEIQE 83 Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPY 174 ++ A+ N N + ER D +Q+D + E L +++VSNPP+ Sbjct: 84 SMIKRARKNIAFNHLEERIDLIQADIKNIKEYLPPQGAELVVSNPPF 130 >gi|324516415|gb|ADY46524.1| HemK methyltransferase family member 2 [Ascaris suum] Length = 208 Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 35/114 (30%), Positives = 61/114 (53%), Gaps = 12/114 (10%) Query: 72 FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAV---CLALLKESPFFKGVGVD 128 +EP +T LL+D AL + RDV ++++G G+G V C LL+ + D Sbjct: 18 YEPAEDTFLLLD-ALEKDAEVLRDRDVSIVVEVGCGSGVVSAFCAQLLQRPACI--LATD 74 Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIESV 178 ++ AL+ K+ A+ N + DT+Q D ++ G+ D+++ NPPY+ +V Sbjct: 75 VNFMALKCTKNTAILNAID--LDTVQCDLIVALSDRLRGIVDLLLFNPPYVPTV 126 >gi|255659095|ref|ZP_05404504.1| putative N-6 adenine-specific DNA methylase [Mitsuokella multacida DSM 20544] gi|260848539|gb|EEX68546.1| putative N-6 adenine-specific DNA methylase [Mitsuokella multacida DSM 20544] Length = 252 Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 32/98 (32%), Positives = 50/98 (51%), Gaps = 10/98 (10%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 +D+ L PR R R+L+LGTGTG + L + E + V+IS E+A N Sbjct: 33 LDAVLLAHFPRYRSRQ--RVLELGTGTGVIPLLIADEVAHVE--AVEISPVMAELAARNV 88 Query: 142 VTNGVSERFDTLQSDWFSSVEGL-----FDVIVSNPPY 174 N + E+ + D+ ++ L FDV+++NPPY Sbjct: 89 HMNELEEKIAVKEGDY-RAIRSLYPAESFDVVLANPPY 125 >gi|227503476|ref|ZP_03933525.1| methyltransferase small [Corynebacterium accolens ATCC 49725] gi|227075979|gb|EEI13942.1| methyltransferase small [Corynebacterium accolens ATCC 49725] Length = 525 Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 3/79 (3%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 V +LDLGTG+G L L+ + D+ +AL++A + +G S + ++ W Sbjct: 163 VSTVLDLGTGSGVQLLGQLECARSI--TATDVHRRALDLAGATVAASGTSTEVELVEGSW 220 Query: 158 FSSVEG-LFDVIVSNPPYI 175 F V G FD IV+NPP++ Sbjct: 221 FEPVAGRTFDRIVANPPFV 239 >gi|323527499|ref|YP_004229652.1| methyltransferase small [Burkholderia sp. CCGE1001] gi|323384501|gb|ADX56592.1| methyltransferase small [Burkholderia sp. CCGE1001] Length = 375 Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 34/107 (31%), Positives = 55/107 (51%), Gaps = 4/107 (3%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 + D+GTGTG V ALL + K V D +AL A+ N G ++ + +Q+D F Sbjct: 198 KAFDIGTGTG-VLAALLAKRGVKKIVATDQDPRALACARENLTRLGYEQQVEVVQADLFP 256 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206 EG ++V NPP++ + + V D + R+ L G + GL+ + Sbjct: 257 --EGRAPLVVCNPPWVPARPASPIEYAVYDPESRMLL-GFLKGLAEH 300 >gi|317151857|ref|YP_004119905.1| methyltransferase small [Desulfovibrio aespoeensis Aspo-2] gi|316942108|gb|ADU61159.1| methyltransferase small [Desulfovibrio aespoeensis Aspo-2] Length = 268 Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 30/76 (39%), Positives = 43/76 (56%), Gaps = 5/76 (6%) Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD---WF 158 +DLG G G V LALL P + GVDI +++ +A NAV ++R+ +D W Sbjct: 54 IDLGCGCGVVGLALLLRQPDLRLTGVDIDPESVRVAGLNAVNLHYADRYAATLADVAQWR 113 Query: 159 SSVEGLFDVIVSNPPY 174 S E + D +V+NPPY Sbjct: 114 S--ERVVDFVVANPPY 127 >gi|150005674|ref|YP_001300418.1| hypothetical protein BVU_3164 [Bacteroides vulgatus ATCC 8482] gi|254884107|ref|ZP_05256817.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA] gi|294776584|ref|ZP_06742054.1| methyltransferase small domain protein [Bacteroides vulgatus PC510] gi|319640872|ref|ZP_07995583.1| hypothetical protein HMPREF9011_01180 [Bacteroides sp. 3_1_40A] gi|262827953|sp|A6L532|TRMN6_BACV8 RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName: Full=tRNA m6A37 methyltransferase gi|149934098|gb|ABR40796.1| conserved hypothetical protein [Bacteroides vulgatus ATCC 8482] gi|254836900|gb|EET17209.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA] gi|294449572|gb|EFG18102.1| methyltransferase small domain protein [Bacteroides vulgatus PC510] gi|317387509|gb|EFV68377.1| hypothetical protein HMPREF9011_01180 [Bacteroides sp. 3_1_40A] Length = 234 Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 31/75 (41%), Positives = 43/75 (57%), Gaps = 2/75 (2%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159 ILD+GTGTG + L ++ + + VDI A+E A+ N + +R + LQ Sbjct: 41 ILDIGTGTGLISL-MMAQRCNARIRAVDIDADAVEQARGNVAASPWQDRIEVELQDICHF 99 Query: 160 SVEGLFDVIVSNPPY 174 + E LFDVIVSNPPY Sbjct: 100 TSETLFDVIVSNPPY 114 >gi|317126847|ref|YP_004093129.1| methyltransferase small [Bacillus cellulosilyticus DSM 2522] gi|315471795|gb|ADU28398.1| methyltransferase small [Bacillus cellulosilyticus DSM 2522] Length = 200 Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 30/97 (30%), Positives = 54/97 (55%), Gaps = 9/97 (9%) Query: 78 TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137 + LL++S F LP + V I+D+G G G + ++L K +P + +DI+ +A+++ Sbjct: 46 SRLLIES---FELPNV----VGTIVDVGCGWGPISISLAKRNPNIDFIALDINERAVKLT 98 Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPP 173 + N NGV+ +QS+ EG + I++NPP Sbjct: 99 EENVKLNGVT-NLHVMQSNLLEGHEGKYYSAIITNPP 134 >gi|269137833|ref|YP_003294533.1| 16S RNA G1207 methylase RsmC [Edwardsiella tarda EIB202] gi|267983493|gb|ACY83322.1| 16S RNA G1207 methylase RsmC [Edwardsiella tarda EIB202] gi|304557888|gb|ADM40552.1| Ribosomal RNA small subunit methyltransferase C [Edwardsiella tarda FL6-60] Length = 378 Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 31/99 (31%), Positives = 50/99 (50%), Gaps = 5/99 (5%) Query: 89 SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148 SLP K +V LD+G G G + A+ + SP + D++ AL ++ N + Sbjct: 223 SLPHGLKGNV---LDVGCGAGVLSAAIARMSPETRLTLSDVNAAALTASRQTLAQNAIDG 279 Query: 149 RFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEV 187 + L S+ FS + G FD+I+SNPP+ + V L + Sbjct: 280 --EVLASNVFSDISGRFDLIISNPPFHDGVQTSLLAAQT 316 >gi|329954889|ref|ZP_08295906.1| methyltransferase domain protein [Bacteroides clarus YIT 12056] gi|328526993|gb|EGF54004.1| methyltransferase domain protein [Bacteroides clarus YIT 12056] Length = 236 Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 1/81 (1%) Query: 96 RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155 +D RILD+G G+G + L L + +P V+I A A+ N ++ S R + + Sbjct: 36 QDAKRILDVGAGSGLISLQLAQRNPEAAITSVEIDPAAAAQAQENIQSSPWSHRMEVVCC 95 Query: 156 DWFS-SVEGLFDVIVSNPPYI 175 D+ E FD+IVSNPPY Sbjct: 96 DFRKYHPEDRFDLIVSNPPYF 116 >gi|183603460|ref|ZP_02964394.1| methyltransferase small domain superfamily [Streptococcus pneumoniae CDC3059-06] gi|183577112|gb|EDT97640.1| methyltransferase small domain superfamily [Streptococcus pneumoniae CDC3059-06] Length = 193 Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 27/73 (36%), Positives = 46/73 (63%), Gaps = 3/73 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LD+G G G + L+L+K + VDI+ +AL++A+ NA N + + QS+ ++ Sbjct: 58 VLDVGCGYGPLGLSLVKVYGV-QATMVDINTRALDLARRNAEKN--NAKATIFQSNIYAR 114 Query: 161 VEGLFDVIVSNPP 173 V+G FD ++SNPP Sbjct: 115 VQGRFDHVISNPP 127 >gi|166033096|ref|ZP_02235925.1| hypothetical protein DORFOR_02818 [Dorea formicigenerans ATCC 27755] gi|166027453|gb|EDR46210.1| hypothetical protein DORFOR_02818 [Dorea formicigenerans ATCC 27755] Length = 246 Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 27/98 (27%), Positives = 55/98 (56%), Gaps = 6/98 (6%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 +D+ L S ++++ + + LDLGTGTG + + L ++P G+++ ++ ++A+ + Sbjct: 32 MDAVLLSSYAKVKRGE--QALDLGTGTGILPILLEAKNPGLHYTGLEVQEESADMARRSV 89 Query: 142 VTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPYI 175 NG+ + D + D + ++VIVSNPPY+ Sbjct: 90 AHNGLENKIDIVTGDIKEASHIFGNDSYEVIVSNPPYM 127 >gi|328858365|gb|EGG07478.1| hypothetical protein MELLADRAFT_77592 [Melampsora larici-populina 98AG31] Length = 948 Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 30/99 (30%), Positives = 51/99 (51%), Gaps = 12/99 (12%) Query: 60 FYNVRLTLSSDTFEPRPETELLV-----------DSALAFSLPRIEKRDVVRILDLGTGT 108 F N+++ + PRPETE D + + P+ K D+ ++LD+GTG+ Sbjct: 612 FGNIQIAVQPPILIPRPETEQWTCKLSDMIKTWNDPEKSGTKPQFGKHDL-KVLDIGTGS 670 Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147 G + L P +GVD+ +A+E+AK NA + G++ Sbjct: 671 GCIPTYLAYNHPNIFVMGVDVDHQAIEVAKRNAFSYGLT 709 >gi|323699539|ref|ZP_08111451.1| methyltransferase small [Desulfovibrio sp. ND132] gi|323459471|gb|EGB15336.1| methyltransferase small [Desulfovibrio desulfuricans ND132] Length = 253 Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 27/76 (35%), Positives = 43/76 (56%), Gaps = 5/76 (6%) Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ---SDWF 158 LDLG G G V L LL P + GV+++ ++ A+ NA + S++ +Q +DW Sbjct: 49 LDLGCGCGVVALGLLLRQPGLRLAGVELNPLSVRAAEENAASLHFSDKLSIIQGDVADW- 107 Query: 159 SSVEGLFDVIVSNPPY 174 +G+ D +V+NPPY Sbjct: 108 -QPDGVVDFVVANPPY 122 >gi|172079624|ref|ZP_02709675.2| methyltransferase small domain superfamily [Streptococcus pneumoniae CDC1873-00] gi|172042082|gb|EDT50128.1| methyltransferase small domain superfamily [Streptococcus pneumoniae CDC1873-00] gi|332203991|gb|EGJ18058.1| methyltransferase small domain protein [Streptococcus pneumoniae GA47368] Length = 193 Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 27/73 (36%), Positives = 46/73 (63%), Gaps = 3/73 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LD+G G G + L+L+K + VDI+ +AL++A+ NA N + + QS+ ++ Sbjct: 58 VLDVGCGYGPLGLSLVKVYGV-QATMVDINTRALDLAQRNAEKN--NAKATIFQSNIYAR 114 Query: 161 VEGLFDVIVSNPP 173 V+G FD ++SNPP Sbjct: 115 VQGRFDHVISNPP 127 >gi|149007219|ref|ZP_01830883.1| hypothetical protein CGSSp18BS74_05201 [Streptococcus pneumoniae SP18-BS74] gi|147761257|gb|EDK68224.1| hypothetical protein CGSSp18BS74_05201 [Streptococcus pneumoniae SP18-BS74] Length = 196 Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 27/73 (36%), Positives = 46/73 (63%), Gaps = 3/73 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LD+G G G + L+L+K + VDI+ +AL++A+ NA N + + QS+ ++ Sbjct: 61 VLDVGCGYGPLGLSLVKVYGV-QATMVDINTRALDLARRNAEKN--NAKATIFQSNIYAR 117 Query: 161 VEGLFDVIVSNPP 173 V+G FD ++SNPP Sbjct: 118 VQGRFDHVISNPP 130 >gi|41406471|ref|NP_959307.1| hypothetical protein MAP0373 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41394820|gb|AAS02690.1| hypothetical protein MAP_0373 [Mycobacterium avium subsp. paratuberculosis K-10] Length = 229 Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 50/178 (28%), Positives = 80/178 (44%), Gaps = 19/178 (10%) Query: 68 SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 + + ++P+ ++ LLVD L I R R+LDL TG+G V +A E Sbjct: 13 AHNVYQPQEDSRLLVDVMHGTGL--IPGR---RVLDLCTGSGFVAIAA-AEMGCASVTAF 66 Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIES---VIVDCL 183 D A+ A+ NA GV D + W ++V+ FDV+VSNPPY+ + ++D L Sbjct: 67 DKCPHAVRCARENAALAGVD--VDVREGSWLAAVDCAPFDVVVSNPPYVPTPPGAVLDEL 124 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG----LCSVEIGYNQKVDVVR 237 G P + + G DG + + + L G + S G Q +D ++ Sbjct: 125 GPVT---GPSWAWNAGRDGRLVLDPLCESAPKLLRDGGSLLLVHSALAGVQQSLDCLK 179 >gi|222099697|ref|YP_002534265.1| 16S rRNA m(2)G 1207 methyltransferase [Thermotoga neapolitana DSM 4359] gi|221572087|gb|ACM22899.1| 16S rRNA m(2)G 1207 methyltransferase [Thermotoga neapolitana DSM 4359] Length = 211 Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 37/103 (35%), Positives = 52/103 (50%), Gaps = 10/103 (9%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG--VSERFDTLQSDW 157 ++LDLG G G + + L KE P + DI+ +A+E AK NA + V R+ L W Sbjct: 64 KVLDLGCGYGVIGIVLKKEYPDLEVYMSDINKRAVEFAKINAKDHNVEVEVRWGNLYEPW 123 Query: 158 FSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199 EG+ FD+IV NPP + V +E+ P DGG Sbjct: 124 ----EGMKFDMIVCNPPIVAGKEV---WMEIVRRAPEFLEDGG 159 >gi|326385164|ref|ZP_08206832.1| putative methyltransferase [Gordonia neofelifaecis NRRL B-59395] gi|326196129|gb|EGD53335.1| putative methyltransferase [Gordonia neofelifaecis NRRL B-59395] Length = 234 Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 47/154 (30%), Positives = 69/154 (44%), Gaps = 18/154 (11%) Query: 72 FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131 + P+ +T +L+DS LA L R R+LDL TG+GAV LA + VD Sbjct: 21 YRPQTDTRMLIDSLLALDL---SGR---RMLDLCTGSGAVALAGARAGADIT--AVDSCP 72 Query: 132 KALEIAKSNAVTNGVSERFD--TLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRD 189 A+ + AV G FD + SD + FD++ NPPY+ + I G E Sbjct: 73 HAVASVRRAAVDAG----FDVHAVLSDLADVTDSGFDIVTCNPPYVLTPI----GTESSI 124 Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223 PR + + G DG + + + L DG+ Sbjct: 125 DGPRHAWNAGPDGRAVLDPLCSALPGLLAADGIA 158 >gi|322385392|ref|ZP_08059037.1| methyltransferase domain protein [Streptococcus cristatus ATCC 51100] gi|321270651|gb|EFX53566.1| methyltransferase domain protein [Streptococcus cristatus ATCC 51100] Length = 195 Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 30/73 (41%), Positives = 42/73 (57%), Gaps = 3/73 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LD+G G G + L L K + VDI+ +AL++A+ NA N VS D QS+ + Sbjct: 61 LLDVGCGYGTLGLTLAKAQELEVTL-VDINQRALDLARKNADANQVSA--DIFQSNVYEQ 117 Query: 161 VEGLFDVIVSNPP 173 V G F I+SNPP Sbjct: 118 VAGQFHHIISNPP 130 >gi|256826282|ref|YP_003150242.1| methyltransferase family protein [Kytococcus sedentarius DSM 20547] gi|256689675|gb|ACV07477.1| methyltransferase family protein [Kytococcus sedentarius DSM 20547] Length = 522 Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 52/167 (31%), Positives = 73/167 (43%), Gaps = 23/167 (13%) Query: 74 PRPETELL----VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129 P PE +L LA PR E V R LD+GTG G L L + + V DI Sbjct: 155 PLPEDHVLGIGGASVTLAAWTPRPE---VARALDIGTGCGVQALHLTHHA--QRVVATDI 209 Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVR 188 S +ALE A+ NGV D V G FD+IVSNPP++ + G+ V Sbjct: 210 SERALEFARFTCALNGVE--LDLRHGSLTEPVAGEEFDLIVSNPPFV--ITPRTKGVPVY 265 Query: 189 DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV----EIGYNQ 231 ++ DGG++ + V+ L G+ + EIG ++ Sbjct: 266 EY-----RDGGVEADGITSGLIGQVAARLAPGGMAQMLGNWEIGPDE 307 >gi|50119680|ref|YP_048847.1| 16S ribosomal RNA m2G1207 methyltransferase [Pectobacterium atrosepticum SCRI1043] gi|81646158|sp|Q6D984|RSMC_ERWCT RecName: Full=Ribosomal RNA small subunit methyltransferase C; AltName: Full=16S rRNA m2G1207 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rsmC gi|49610206|emb|CAG73649.1| ribosomal RNA small subunit methyltransferase C [Pectobacterium atrosepticum SCRI1043] Length = 348 Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 27/88 (30%), Positives = 47/88 (53%), Gaps = 2/88 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LD+ G G + L K+SP + D+S A+E SNA + + S+ +S Sbjct: 199 KVLDIACGAGVLASVLAKQSPKIRLTLSDVSAAAVE--SSNATLAANALEGSVIASNVYS 256 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEV 187 ++G FD+IVSNPP+ + + +E+ Sbjct: 257 DIDGRFDMIVSNPPFHDGLQTSLQAVEM 284 >gi|254363054|ref|ZP_04979113.1| rRNA (guanine-N(2)-)-methyltransferase [Mannheimia haemolytica PHL213] gi|153094719|gb|EDN75509.1| rRNA (guanine-N(2)-)-methyltransferase [Mannheimia haemolytica PHL213] Length = 329 Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 36/120 (30%), Positives = 55/120 (45%), Gaps = 4/120 (3%) Query: 82 VDSALAFSLPRIEKRDVVR--ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKS 139 +D+ L +K D ++ +LDLG G G + L ++ P K DI ALE + Sbjct: 172 LDNGTKLLLSTFDKADRLKGKVLDLGCGAGVIGATLKQQFPKIKLTMSDIHAMALESGRR 231 Query: 140 NAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199 N + + + SD FS + FD+IVSNPP+ + V +E F + L G Sbjct: 232 TLAENQLEG--EVVASDVFSHINERFDLIVSNPPFHDGVDTAYRAVEELIFQAKNHLTKG 289 >gi|152982224|ref|YP_001353635.1| hypothetical protein mma_1945 [Janthinobacterium sp. Marseille] gi|151282301|gb|ABR90711.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille] Length = 368 Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 34/104 (32%), Positives = 55/104 (52%), Gaps = 4/104 (3%) Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162 D+GTGTG + ALL + K V + +AL AK N + + +R L++D F + Sbjct: 195 DIGTGTGVIA-ALLAQRGVEKVVATEQDVRALACAKENLLRLDLRDRVQVLEADLFPA-- 251 Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206 G +IV NPP+I + + + D D R+ L G ++GL+ + Sbjct: 252 GKAPLIVCNPPWIPARPSSAIEYAIYDPDSRM-LRGFLNGLAAH 294 >gi|15900728|ref|NP_345332.1| hypothetical protein SP_0841 [Streptococcus pneumoniae TIGR4] gi|148990349|ref|ZP_01821535.1| pantothenate kinase [Streptococcus pneumoniae SP6-BS73] gi|148997084|ref|ZP_01824738.1| hypothetical protein CGSSp11BS70_09990 [Streptococcus pneumoniae SP11-BS70] gi|194398552|ref|YP_002037476.1| methyltransferase small domain [Streptococcus pneumoniae G54] gi|298503153|ref|YP_003725093.1| methyltransferase [Streptococcus pneumoniae TCH8431/19A] gi|307067437|ref|YP_003876403.1| 16S RNA G1207 methylase RsmC [Streptococcus pneumoniae AP200] gi|14972315|gb|AAK74972.1| conserved hypothetical protein [Streptococcus pneumoniae TIGR4] gi|147756784|gb|EDK63824.1| hypothetical protein CGSSp11BS70_09990 [Streptococcus pneumoniae SP11-BS70] gi|147924378|gb|EDK75469.1| pantothenate kinase [Streptococcus pneumoniae SP6-BS73] gi|194358219|gb|ACF56667.1| Methyltransferase small domain [Streptococcus pneumoniae G54] gi|298238748|gb|ADI69879.1| methyltransferase [Streptococcus pneumoniae TCH8431/19A] gi|306408974|gb|ADM84401.1| 16S RNA G1207 methylase RsmC [Streptococcus pneumoniae AP200] Length = 196 Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 27/73 (36%), Positives = 46/73 (63%), Gaps = 3/73 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LD+G G G + L+L+K + VDI+ +AL++A+ NA N + + QS+ ++ Sbjct: 61 VLDVGCGYGPLGLSLVKVYGV-QATMVDINTRALDLAQRNAEKN--NAKATIFQSNIYAR 117 Query: 161 VEGLFDVIVSNPP 173 V+G FD ++SNPP Sbjct: 118 VQGRFDHVISNPP 130 >gi|301097822|ref|XP_002898005.1| conserved hypothetical protein [Phytophthora infestans T30-4] gi|262106450|gb|EEY64502.1| conserved hypothetical protein [Phytophthora infestans T30-4] Length = 200 Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 36/123 (29%), Positives = 62/123 (50%), Gaps = 10/123 (8%) Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAV----CLALLKE 118 + + D +EP +T L VD AL LP++ + +++G G+GAV L K Sbjct: 7 IDMAYDCDVYEPAEDTYLFVD-ALQDELPQLVALNPAICVEIGCGSGAVFVYLATQLQKM 65 Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD----WFSSVEGLFDVIVSNPPY 174 + DI+ A +A+ A NG +E FD +++D + ++G DV++ NPPY Sbjct: 66 GTRAMFLATDINPLAAGVAQQTAKNNG-AEAFDVVRTDLLQCYEPRIQGHVDVLLFNPPY 124 Query: 175 IES 177 + + Sbjct: 125 VPT 127 >gi|169832916|ref|YP_001694296.1| methyltransferase small subunit [Streptococcus pneumoniae Hungary19A-6] gi|168995418|gb|ACA36030.1| methyltransferase small domain superfamily [Streptococcus pneumoniae Hungary19A-6] gi|327390192|gb|EGE88535.1| methyltransferase small domain protein [Streptococcus pneumoniae GA04375] Length = 193 Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 27/73 (36%), Positives = 46/73 (63%), Gaps = 3/73 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LD+G G G + L+L+K + VDI+ +AL++A+ NA N + + QS+ ++ Sbjct: 58 VLDVGCGYGPLGLSLVKVYGV-QATMVDINTRALDLAQRNAEKN--NAKATIFQSNIYAR 114 Query: 161 VEGLFDVIVSNPP 173 V+G FD ++SNPP Sbjct: 115 VQGRFDHVISNPP 127 >gi|315604644|ref|ZP_07879707.1| HemK family modification methylase [Actinomyces sp. oral taxon 180 str. F0310] gi|315313656|gb|EFU61710.1| HemK family modification methylase [Actinomyces sp. oral taxon 180 str. F0310] Length = 303 Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 36/124 (29%), Positives = 58/124 (46%), Gaps = 6/124 (4%) Query: 60 FYNVRLTLSS--DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117 Y LTL S F RPETE+L A+ + + R R++DL TG+GA+ ++ Sbjct: 82 MYFRSLTLQSIPGVFVVRPETEVLAGLAIDEAAAVVRARGEARVVDLCTGSGAIAFSVAT 141 Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVS----ERFDTLQSDWFSSVEGLFDVIVSNPP 173 E+ + V+ +A N G ER D + ++ + DV+V+NPP Sbjct: 142 EAEHTEVWAVEKEPDPFALACRNRDLLGARGVHLERGDATDPATLAHLDAMVDVVVTNPP 201 Query: 174 YIES 177 Y+ + Sbjct: 202 YVPA 205 >gi|325204216|gb|ADY99669.1| methyltransferase domain protein [Neisseria meningitidis M01-240355] Length = 331 Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 36/120 (30%), Positives = 61/120 (50%), Gaps = 14/120 (11%) Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 LD+GTG+G V A+L + +G D + KA+ A++N G ++ + ++D F Sbjct: 157 LDIGTGSG-VLAAILAKQGIPSVIGTDTNPKAVACARANIARLGFEKQVEIRETDLFP-- 213 Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221 EG D+IV NPP++ + +E +DP ++ L+ + A +HLN DG Sbjct: 214 EGFVDLIVCNPPWLPAKPTSA--VESALYDPESAM------LAAFLRDA---PKHLNPDG 262 >gi|325130320|gb|EGC53087.1| methyltransferase domain protein [Neisseria meningitidis OX99.30304] Length = 331 Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 36/120 (30%), Positives = 61/120 (50%), Gaps = 14/120 (11%) Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 LD+GTG+G V A+L + +G D + KA+ A++N G ++ + ++D F Sbjct: 157 LDIGTGSG-VLAAILAKQGIPSVIGTDTNPKAVACARANIARLGFEKQVEIRETDLFP-- 213 Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221 EG D+IV NPP++ + +E +DP ++ L+ + A +HLN DG Sbjct: 214 EGFVDLIVCNPPWLPAKPTSA--VESALYDPESAM------LAAFLRDA---PKHLNPDG 262 >gi|111657488|ref|ZP_01408234.1| hypothetical protein SpneT_02001313 [Streptococcus pneumoniae TIGR4] gi|183603472|ref|ZP_02715072.2| methyltransferase small domain superfamily [Streptococcus pneumoniae CDC0288-04] gi|183603794|ref|ZP_02721432.2| methyltransferase small domain superfamily [Streptococcus pneumoniae MLV-016] gi|221231625|ref|YP_002510777.1| methyltransferase [Streptococcus pneumoniae ATCC 700669] gi|225854347|ref|YP_002735859.1| methyltransferase small domain superfamily [Streptococcus pneumoniae JJA] gi|225861263|ref|YP_002742772.1| methyltransferase small domain superfamily [Streptococcus pneumoniae Taiwan19F-14] gi|298230687|ref|ZP_06964368.1| methyltransferase small domain [Streptococcus pneumoniae str. Canada MDR_19F] gi|298254394|ref|ZP_06977980.1| methyltransferase small domain [Streptococcus pneumoniae str. Canada MDR_19A] gi|183574719|gb|EDT95247.1| methyltransferase small domain superfamily [Streptococcus pneumoniae CDC0288-04] gi|183578489|gb|EDT99017.1| methyltransferase small domain superfamily [Streptococcus pneumoniae MLV-016] gi|220674085|emb|CAR68602.1| putative methyltransferase [Streptococcus pneumoniae ATCC 700669] gi|225722342|gb|ACO18195.1| methyltransferase small domain superfamily [Streptococcus pneumoniae JJA] gi|225727139|gb|ACO22990.1| methyltransferase small domain superfamily [Streptococcus pneumoniae Taiwan19F-14] gi|332204845|gb|EGJ18910.1| methyltransferase small domain protein [Streptococcus pneumoniae GA47901] Length = 193 Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 27/73 (36%), Positives = 46/73 (63%), Gaps = 3/73 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LD+G G G + L+L+K + VDI+ +AL++A+ NA N + + QS+ ++ Sbjct: 58 VLDVGCGYGPLGLSLVKVYGV-QATMVDINTRALDLAQRNAEKN--NAKATIFQSNIYAR 114 Query: 161 VEGLFDVIVSNPP 173 V+G FD ++SNPP Sbjct: 115 VQGRFDHVISNPP 127 >gi|226309797|ref|YP_002769691.1| hypothetical protein BBR47_02100 [Brevibacillus brevis NBRC 100599] gi|226092745|dbj|BAH41187.1| conserved hypothetical protein [Brevibacillus brevis NBRC 100599] Length = 198 Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 36/115 (31%), Positives = 59/115 (51%), Gaps = 13/115 (11%) Query: 71 TFEPRPETELLVDSALAFSLPRIEKRDVV-----------RILDLGTGTGAVCLALLKES 119 TF+ R + A FS RI+ V+ R+LD+G G G + L K + Sbjct: 20 TFKLRDNEFRFITDAGVFSRDRIDFGSVLLIENMEINSHARVLDVGCGYGPMGLTAAKLA 79 Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPP 173 + +D++ +A+ +A+ NA NG+ + + SD +S V+G FDVI++NPP Sbjct: 80 DHGRVTMIDVNERAVNLARRNAEANGI-KNVEVRVSDVYSGVQGEQFDVILTNPP 133 >gi|118463025|ref|YP_879711.1| methylase, putative [Mycobacterium avium 104] gi|118164312|gb|ABK65209.1| methylase, putative [Mycobacterium avium 104] Length = 229 Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 44/139 (31%), Positives = 67/139 (48%), Gaps = 15/139 (10%) Query: 68 SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 + + ++P+ ++ LLVD L I R R+LDL TG+G V +A E Sbjct: 13 AHNVYQPQEDSRLLVDVMHGTGL--IPGR---RVLDLCTGSGFVAIAA-AEMGCASVTAF 66 Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIES---VIVDCL 183 D A+ A+ NA GV D + W ++V+ FDV+VSNPPY+ + ++D L Sbjct: 67 DKCPHAVRCARENAALAGVD--VDVREGSWLAAVDCAPFDVVVSNPPYVPTPPGAVLDEL 124 Query: 184 GLEVRDFDPRISLDGGIDG 202 G P + + G DG Sbjct: 125 GPVT---GPSWAWNAGRDG 140 >gi|294101614|ref|YP_003553472.1| methyltransferase small [Aminobacterium colombiense DSM 12261] gi|293616594|gb|ADE56748.1| methyltransferase small [Aminobacterium colombiense DSM 12261] Length = 246 Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 38/113 (33%), Positives = 55/113 (48%), Gaps = 11/113 (9%) Query: 71 TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV-GVDI 129 ++P + VD+ L S + +D RIL+LG TG + L L P + G+DI Sbjct: 18 AWQPVDGPRVTVDTILLASFVKARGKD--RILELGCATGVISLLLALRLPEATKIEGIDI 75 Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDW------FSSVEGLFDVIVSNPPYIE 176 + +AK NA NG+ R SD ++S FDV+V+NPPY E Sbjct: 76 QEDLVNLAKRNAQENGLDARVSFFLSDLRNIKDRYASQS--FDVVVTNPPYDE 126 >gi|138893776|ref|YP_001124229.1| 16S rRNA m(2)G 1207 methyltransferase [Geobacillus thermodenitrificans NG80-2] gi|196251113|ref|ZP_03149792.1| methyltransferase small [Geobacillus sp. G11MC16] gi|134265289|gb|ABO65484.1| 16S rRNA m(2)G 1207 methyltransferase [Geobacillus thermodenitrificans NG80-2] gi|196209354|gb|EDY04134.1| methyltransferase small [Geobacillus sp. G11MC16] Length = 200 Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 37/115 (32%), Positives = 56/115 (48%), Gaps = 8/115 (6%) Query: 61 YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR-ILDLGTGTGAVCLALLKES 119 + R T S F R VD + ++ DV +LD+G G G + LAL K Sbjct: 26 HEFRFTTDSGVFSKRE-----VDFGTRLLIETFQEPDVAGDLLDVGCGYGPIGLALAKSF 80 Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPP 173 P + +D++ +ALE+A+ N NG+ +SD FS V E F +++NPP Sbjct: 81 PDRRVQMIDVNERALELAEENKQANGIHNAI-IYKSDLFSEVGEQRFAAVITNPP 134 >gi|261492828|ref|ZP_05989375.1| 16S ribosomal RNA m2G1207 methyltransferase [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261494807|ref|ZP_05991285.1| 16S ribosomal RNA m2G1207 methyltransferase [Mannheimia haemolytica serotype A2 str. OVINE] gi|261309518|gb|EEY10743.1| 16S ribosomal RNA m2G1207 methyltransferase [Mannheimia haemolytica serotype A2 str. OVINE] gi|261311510|gb|EEY12666.1| 16S ribosomal RNA m2G1207 methyltransferase [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 329 Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 32/100 (32%), Positives = 47/100 (47%), Gaps = 2/100 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LDLG G G + L ++ P K DI ALE + N + + + SD FS Sbjct: 192 KVLDLGCGAGVIGATLKQQFPKIKLTMSDIHAMALESGRRTLAENQLEG--EVVASDVFS 249 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199 + FD+IVSNPP+ + V +E F + L G Sbjct: 250 HINERFDLIVSNPPFHDGVDTAYRAVEELIFQAKNHLTKG 289 >gi|238918501|ref|YP_002932015.1| 16S ribosomal RNA m2G1207 methyltransferase [Edwardsiella ictaluri 93-146] gi|238868069|gb|ACR67780.1| ribosomal RNA small subunit methyltransferase C (2) [Edwardsiella ictaluri 93-146] Length = 346 Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 2/88 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+LD+G G G + A+ + SP D++ AL ++ N + + L S+ FS Sbjct: 199 RVLDVGCGAGVLSAAITRMSPETTLTLSDVNAAALTASRQTLAQNEIDG--EILASNVFS 256 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEV 187 + G FD+I+SNPP+ + V L + Sbjct: 257 DISGRFDLIISNPPFHDGVQTSLLAAQT 284 >gi|312796796|ref|YP_004029718.1| hypothetical protein RBRH_01509 [Burkholderia rhizoxinica HKI 454] gi|312168571|emb|CBW75574.1| unnamed protein product [Burkholderia rhizoxinica HKI 454] Length = 326 Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 43/155 (27%), Positives = 69/155 (44%), Gaps = 20/155 (12%) Query: 75 RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134 +PE +D A L + +LD+G G+G + + L VG+D++ +A Sbjct: 78 QPEQLFFMDYTSAEDLKQ------ASVLDIGVGSGVLSIFCLLNGAT-SCVGLDVNPRAK 130 Query: 135 EIAKSNAVTNGVSERFDT---LQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDF 190 +A NA+ N + + FD SD F+SV + FD I SNPP+ + Sbjct: 131 ILAGHNAILNHIDKNFDIRDGSTSDIFASVKDKQFDFICSNPPFEPT---------PPGI 181 Query: 191 DPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225 D ++ GI G+ I ++ HL DG+ V Sbjct: 182 DYYVNSAAGIYGMDFAEKILSNINPHLTDDGMLQV 216 >gi|319902147|ref|YP_004161875.1| methyltransferase small [Bacteroides helcogenes P 36-108] gi|319417178|gb|ADV44289.1| methyltransferase small [Bacteroides helcogenes P 36-108] Length = 235 Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 27/76 (35%), Positives = 45/76 (59%), Gaps = 1/76 (1%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+LD+GTGTG + L L + + K ++I A + A+ N + + ++R + + D+ + Sbjct: 40 RVLDVGTGTGLIALQLAQRNSDAKITAIEIDIAAAKQARDNVLHSSWADRIEVVCIDFRN 99 Query: 160 -SVEGLFDVIVSNPPY 174 E FD+IVSNPPY Sbjct: 100 YQSEDKFDLIVSNPPY 115 >gi|237738115|ref|ZP_04568596.1| methyltransferase [Fusobacterium mortiferum ATCC 9817] gi|229419995|gb|EEO35042.1| methyltransferase [Fusobacterium mortiferum ATCC 9817] Length = 245 Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 32/97 (32%), Positives = 50/97 (51%), Gaps = 6/97 (6%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 +DS L I R I+DLGTG G + L L K++ K G++I + +AK N Sbjct: 31 IDSLLVSEFATIT-RTTKNIIDLGTGNGVIPLFLSKKTK-AKITGIEIQSISSALAKRNI 88 Query: 142 VTNGVSERFDTLQSD---WFSSV-EGLFDVIVSNPPY 174 N + E+ + + D W +G FD++V+NPP+ Sbjct: 89 ELNNLQEQIEIINDDMKNWNKYFRKGYFDLVVTNPPF 125 >gi|220928239|ref|YP_002505148.1| methyltransferase small [Clostridium cellulolyticum H10] gi|219998567|gb|ACL75168.1| methyltransferase small [Clostridium cellulolyticum H10] Length = 198 Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 28/76 (36%), Positives = 46/76 (60%), Gaps = 3/76 (3%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 + +LD+G G GA+ L + P +D++ +AL+ K NA +N +S + L S+ F Sbjct: 59 MSVLDIGCGYGAIGLYIKSIFPQQNITMIDVNNRALDYTKKNAASNNLS--VEALNSNLF 116 Query: 159 SSVEG-LFDVIVSNPP 173 +++EG FD I+SNPP Sbjct: 117 TALEGRTFDDIISNPP 132 >gi|308187814|ref|YP_003931945.1| hypothetical protein Pvag_2323 [Pantoea vagans C9-1] gi|308058324|gb|ADO10496.1| Uncharacterized protein [Pantoea vagans C9-1] Length = 248 Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 4/81 (4%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 V RILD+G+G+G + L L + +P + V++ +A + A+ N + ER Q D Sbjct: 48 VRRILDIGSGSGLIALMLAQRTPSQVQIDAVELEPEAAQQAQENMQQSPWPERIQVHQQD 107 Query: 157 ---WFSSVEGLFDVIVSNPPY 174 W + + +IVSNPPY Sbjct: 108 IASWAEQCDKRYSLIVSNPPY 128 >gi|294634635|ref|ZP_06713169.1| ribosomal RNA small subunit methyltransferase [Edwardsiella tarda ATCC 23685] gi|291091965|gb|EFE24526.1| ribosomal RNA small subunit methyltransferase [Edwardsiella tarda ATCC 23685] Length = 373 Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 26/88 (29%), Positives = 46/88 (52%), Gaps = 2/88 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+LD+G G G + A+ + SP D++ AL ++ N + + + S+ FS Sbjct: 225 RVLDVGCGAGVLSAAIARMSPETTLTLCDVNAAALAASRQTLAQNDIPG--EVIASNVFS 282 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEV 187 ++G FD+I+SNPP+ + V L + Sbjct: 283 DIDGRFDLIISNPPFHDGVQTSLLAAQT 310 >gi|323443087|gb|EGB00707.1| methyltransferase small subunit [Staphylococcus aureus O46] Length = 202 Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 49/156 (31%), Positives = 69/156 (44%), Gaps = 22/156 (14%) Query: 19 SHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPET 78 SH DP SV+ + QR I LKH I I F ++ SD Sbjct: 2 SHYYDEDP-SVISNEQR------IQYQLKHHKIDLITDNGVFSKDKVDYGSD-------- 46 Query: 79 ELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAK 138 +LV + L P KR I D+G G G + L + K SP +D++ +AL + K Sbjct: 47 -VLVQTFLKTHPPGPSKR----IADVGCGYGPIGLMIAKVSPHHSITMLDVNHRALALVK 101 Query: 139 SNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPP 173 N NG+ + +SD S+ E FD I++NPP Sbjct: 102 KNQKLNGI-DNVIVKESDALSAEEDKSFDFILTNPP 136 >gi|294673578|ref|YP_003574194.1| hypothetical protein PRU_0841 [Prevotella ruminicola 23] gi|294471995|gb|ADE81384.1| conserved hypothetical protein [Prevotella ruminicola 23] Length = 236 Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 29/76 (38%), Positives = 41/76 (53%), Gaps = 1/76 (1%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 RILD+GTGTG V L + + P + G+DI A + A+ N V + S+R + D Sbjct: 41 RILDIGTGTGLVALMMAQRFPEAQVTGIDIDEDAAQQAQENVVGSPFSDRIMINREDATK 100 Query: 160 -SVEGLFDVIVSNPPY 174 + +D IV NPPY Sbjct: 101 IDDKAGYDAIVCNPPY 116 >gi|293607190|ref|ZP_06689531.1| methyltransferase [Achromobacter piechaudii ATCC 43553] gi|292814282|gb|EFF73422.1| methyltransferase [Achromobacter piechaudii ATCC 43553] Length = 407 Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 34/106 (32%), Positives = 57/106 (53%), Gaps = 4/106 (3%) Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162 D+GTGTG V A++ + + D+ +AL A+ N G+S++ D +++D F E Sbjct: 233 DIGTGTG-VLAAVIARRGGKRVIATDLDPRALACARENLEQLGLSKQVDVVEADLFP--E 289 Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208 G ++V NPP++ + L V D D R+ L G ++GL + T Sbjct: 290 GRVSLVVCNPPWLPARPSSPLEQAVYDPDSRM-LRGFLNGLPAHLT 334 >gi|238790071|ref|ZP_04633849.1| Ribosomal RNA small subunit methyltransferase C [Yersinia frederiksenii ATCC 33641] gi|238721884|gb|EEQ13546.1| Ribosomal RNA small subunit methyltransferase C [Yersinia frederiksenii ATCC 33641] Length = 347 Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 23/87 (26%), Positives = 47/87 (54%), Gaps = 2/87 (2%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LD+G G G + L ++ P K D+S A+E +++ N + + + S+ +S Sbjct: 200 VLDVGCGAGVLASVLAQQLPKIKWTLSDVSAAAIESSRATLAANNIEAQ--VIASNVYSD 257 Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEV 187 ++G F++I+SNPP+ + + E+ Sbjct: 258 IKGRFEMIISNPPFHDGIQTSLTAAEM 284 >gi|304387506|ref|ZP_07369695.1| methyltransferase domain protein [Neisseria meningitidis ATCC 13091] gi|304338393|gb|EFM04514.1| methyltransferase domain protein [Neisseria meningitidis ATCC 13091] Length = 367 Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 36/120 (30%), Positives = 61/120 (50%), Gaps = 14/120 (11%) Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 LD+GTG+G V A+L + +G D + KA+ A++N G ++ + ++D F Sbjct: 193 LDIGTGSG-VLAAILAKQGIPSVIGTDTNPKAVACARANIARLGFEKQVEIRETDLFP-- 249 Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221 EG D+IV NPP++ + +E +DP ++ L+ + A +HLN DG Sbjct: 250 EGFVDLIVCNPPWLPAKPTSA--VESALYDPESAM------LAAFLRDA---PKHLNPDG 298 >gi|294787522|ref|ZP_06752775.1| putative methyltransferase small domain protein [Parascardovia denticolens F0305] gi|315226897|ref|ZP_07868685.1| 16S rRNA methyltransferase [Parascardovia denticolens DSM 10105] gi|294484878|gb|EFG32513.1| putative methyltransferase small domain protein [Parascardovia denticolens F0305] gi|315121029|gb|EFT84161.1| 16S rRNA methyltransferase [Parascardovia denticolens DSM 10105] Length = 250 Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 33/101 (32%), Positives = 52/101 (51%), Gaps = 5/101 (4%) Query: 78 TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137 T +L+ + E V LDLG G G + LAL +E P +D++ +A+E+ Sbjct: 46 TRVLLKEVPGRAADEAEGHRVKNCLDLGCGWGPISLALAREYPQATVWALDVNERAVELT 105 Query: 138 KSNAVTNGVSE----RFDTLQSDWFSSV-EGLFDVIVSNPP 173 K+NA N V+ ++L +D+ + E FD+I SNPP Sbjct: 106 KANARRNHVASVQAGTAESLAADYGQAWEEARFDLIWSNPP 146 >gi|162446999|ref|YP_001620131.1| methyltransferase [Acholeplasma laidlawii PG-8A] gi|161985106|gb|ABX80755.1| methyltransferase [Acholeplasma laidlawii PG-8A] Length = 239 Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 38/111 (34%), Positives = 56/111 (50%), Gaps = 15/111 (13%) Query: 78 TELLVDSAL--AFSLPRIEKRDVVR-------ILDLGTGTGAVCLALLKESPFFKG--VG 126 T+L ++S + AF++ I D VR ILD GTG GA+ L L S F G G Sbjct: 9 TKLYIESDIGKAFNMDTIILSDFVRVPKDTKSILDFGTGNGAIMLYL---SQRFSGHITG 65 Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFS-SVEGLFDVIVSNPPYIE 176 +++ K E+A N N + R D + D + + D+IVSNPP+ + Sbjct: 66 IELQEKRYELAVHNIKLNNLESRLDVVNMDLKTYRSKKHADIIVSNPPFFK 116 >gi|312173676|emb|CBX81930.1| Ribosomal RNA small subunit methyltransferase [Erwinia amylovora ATCC BAA-2158] Length = 366 Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 43/159 (27%), Positives = 70/159 (44%), Gaps = 30/159 (18%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LD+G G G + L SP + D++ A+ +K+ N + D S+ +S Sbjct: 223 KVLDVGCGAGVLSAMLASFSPKVRLTLTDVNAAAIASSKATLAANQLEG--DVFASNVWS 280 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 + G FD+I+SNPP+ + V + SLD +T+ G HLN Sbjct: 281 DISGRFDMIMSNPPFHDGV--------------QTSLDAA-------QTLIRGAVSHLNT 319 Query: 220 DG----LCSVEIGYNQKVDVVRIFESRKLFLVNA-FKDY 253 G + + + Y Q +D F S ++ L N FK Y Sbjct: 320 GGELRIVANAFLPYPQVLD--EAFGSHEVLLQNGRFKVY 356 >gi|308389325|gb|ADO31645.1| hypothetical protein NMBB_1318 [Neisseria meningitidis alpha710] Length = 367 Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 36/120 (30%), Positives = 61/120 (50%), Gaps = 14/120 (11%) Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 LD+GTG+G V A+L + +G D + KA+ A++N G ++ + ++D F Sbjct: 193 LDIGTGSG-VLAAILAKQGIPSVIGTDTNPKAVACARANIARLGFEKQVEIRETDLFP-- 249 Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221 EG D+IV NPP++ + +E +DP ++ L+ + A +HLN DG Sbjct: 250 EGFVDLIVCNPPWLPAKPTSA--VESALYDPESAM------LAAFLRDA---PKHLNPDG 298 >gi|148270257|ref|YP_001244717.1| methyltransferase small [Thermotoga petrophila RKU-1] gi|147735801|gb|ABQ47141.1| 16S rRNA m(2)G 1207 methyltransferase [Thermotoga petrophila RKU-1] Length = 210 Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 32/79 (40%), Positives = 44/79 (55%), Gaps = 7/79 (8%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE--RFDTLQSDW 157 ++LDLG G G V + L KE P + DI+ +A+E AK NA + V R+ L W Sbjct: 63 KVLDLGCGYGVVGIVLKKEYPDLEVYMSDINKRAVEFAKINAKDHNVEVDIRWGNLYEPW 122 Query: 158 FSSVEGL-FDVIVSNPPYI 175 EG+ FD+IV NPP + Sbjct: 123 ----EGMKFDMIVCNPPVV 137 >gi|325136282|gb|EGC58890.1| methyltransferase domain protein [Neisseria meningitidis M0579] Length = 367 Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 36/120 (30%), Positives = 61/120 (50%), Gaps = 14/120 (11%) Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 LD+GTG+G V A+L + +G D + KA+ A++N G ++ + ++D F Sbjct: 193 LDIGTGSG-VLAAILAKQGIPSVIGTDTNPKAVACARANIARLGFEKQVEIRETDLFP-- 249 Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221 EG D+IV NPP++ + +E +DP ++ L+ + A +HLN DG Sbjct: 250 EGFVDLIVCNPPWLPAKPTSA--VESALYDPESAM------LAAFLRDA---PKHLNPDG 298 >gi|292489500|ref|YP_003532388.1| ribosomal RNA small subunit methyltransferase [Erwinia amylovora CFBP1430] gi|291554935|emb|CBA22900.1| Ribosomal RNA small subunit methyltransferase [Erwinia amylovora CFBP1430] Length = 366 Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 43/159 (27%), Positives = 70/159 (44%), Gaps = 30/159 (18%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LD+G G G + L SP + D++ A+ +K+ N + D S+ +S Sbjct: 223 KVLDVGCGAGVLSAMLASFSPKVRLTLTDVNAAAIASSKATLAANQLEG--DVFASNVWS 280 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 + G FD+I+SNPP+ + V + SLD +T+ G HLN Sbjct: 281 DISGRFDMIMSNPPFHDGV--------------QTSLDAA-------QTLIRGAVSHLNT 319 Query: 220 DG----LCSVEIGYNQKVDVVRIFESRKLFLVNA-FKDY 253 G + + + Y Q +D F S ++ L N FK Y Sbjct: 320 GGELRIVANAFLPYPQVLD--EAFGSHEVLLQNGRFKVY 356 >gi|229916344|ref|YP_002884990.1| ribosomal protein L11 methyltransferase [Exiguobacterium sp. AT1b] gi|259534532|sp|C4L423|PRMA_EXISA RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11 Mtase gi|229467773|gb|ACQ69545.1| ribosomal protein L11 methyltransferase [Exiguobacterium sp. AT1b] Length = 312 Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 39/136 (28%), Positives = 67/136 (49%), Gaps = 23/136 (16%) Query: 57 WRDFY-----NVRLTLSS--DTFEPRPETE-LLVDSALAFS----------LPRIEK--R 96 W+ +Y + +LT+ + + P+PE +L+D +AF + IE R Sbjct: 115 WKQYYKPVKISQQLTIVPLWEEYTPQPEENVILLDPGMAFGTGTHPTTMLCIQAIENYIR 174 Query: 97 DVVRILDLGTGTGAVCLALLK-ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155 + ++D+GTG+G + +A K + K + D+ A+E A+ N TNGV E Sbjct: 175 EGDHVIDVGTGSGVLSIAAAKLGAASVKAL--DLDSVAVESARQNVETNGVGELVQVDTG 232 Query: 156 DWFSSVEGLFDVIVSN 171 D VEG +D++V+N Sbjct: 233 DLLKGVEGEYDLVVAN 248 >gi|172035682|ref|YP_001802183.1| putative methyltransferase [Cyanothece sp. ATCC 51142] gi|171697136|gb|ACB50117.1| putative methyltransferase [Cyanothece sp. ATCC 51142] Length = 247 Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 33/88 (37%), Positives = 45/88 (51%), Gaps = 5/88 (5%) Query: 76 PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135 P +L++D+ +A D RILDLG GTG + L LLK P K + VD S + LE Sbjct: 34 PHYDLMLDTLVA-----CVSIDAHRILDLGCGTGELSLKLLKHCPNAKVMAVDYSPRMLE 88 Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEG 163 +AKS ER +Q D+ + G Sbjct: 89 MAKSKLEKTEFLERIRFIQGDFGAWANG 116 >gi|261340876|ref|ZP_05968734.1| SAM-dependent methyltransferase [Enterobacter cancerogenus ATCC 35316] gi|288317307|gb|EFC56245.1| SAM-dependent methyltransferase [Enterobacter cancerogenus ATCC 35316] Length = 245 Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 30/90 (33%), Positives = 47/90 (52%), Gaps = 5/90 (5%) Query: 97 DVVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQS 155 + RILD+GTG+G + L L + + + V++ +A A NA + +ER + + Sbjct: 44 EATRILDIGTGSGLLALMLAQRTKNHVTIDAVELDAQAAGQASENAAESPWAERINVKCA 103 Query: 156 D---WFSSVEGLFDVIVSNPPYIESVIVDC 182 D W +D+IVSNPPY E V+C Sbjct: 104 DVLAWAPEQTARYDLIVSNPPYFEPG-VEC 132 >gi|228477542|ref|ZP_04062175.1| methyltransferase small domain protein [Streptococcus salivarius SK126] gi|228250686|gb|EEK09884.1| methyltransferase small domain protein [Streptococcus salivarius SK126] Length = 196 Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 3/73 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LD+G G G + ++L K K +DI+ +A+++A+ NA N V QS+ + + Sbjct: 61 LLDVGCGYGPLGISLAKVQGV-KATMIDINSRAIDLARQNAQRNKVEATI--FQSNIYEN 117 Query: 161 VEGLFDVIVSNPP 173 V G FD I+SNPP Sbjct: 118 VTGSFDYIISNPP 130 >gi|541428|pir||S41759 ribosomal protein L11 methyltransferase (EC 2.1.1.-) - Clostridium acetobutylicum Length = 300 Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 48/194 (24%), Positives = 86/194 (44%), Gaps = 30/194 (15%) Query: 57 WRDFYN-----VRLTLSS--DTFEPRP-ETELLVDSALAF-------------SLPRIEK 95 W+ +Y R+ + + + P+ E L +D +AF +L R Sbjct: 116 WKKYYKPTKIGARIVVKPLWEEYTPKDYELMLNMDPGMAFGTGTHETTRMCIQALERYVN 175 Query: 96 RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155 D + D+GTG+G + +A K + K +GVD+ A++ AK N N V+ + L Sbjct: 176 EDA-EVFDIGTGSGILAIAAAKLNAK-KVLGVDLDSVAVKAAKENIQYNNVN-NIEILHG 232 Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215 + V+G D+IV+N +I D + + + D + + DG + A+ V Sbjct: 233 NLMEVVQGKADIIVAN------IIADVINILIPDINKFLKTDGYFISSGIIKDRAEDVIE 286 Query: 216 HLNKDGLCSVEIGY 229 +L K+ +E+GY Sbjct: 287 NLKKNKFEIIEVGY 300 >gi|299140951|ref|ZP_07034089.1| SmtA protein [Prevotella oris C735] gi|298577917|gb|EFI49785.1| SmtA protein [Prevotella oris C735] Length = 231 Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 30/77 (38%), Positives = 41/77 (53%), Gaps = 3/77 (3%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW-- 157 R+LD+GTGTG + L L + P K +DI+ +A AK N + + + Q Sbjct: 38 RVLDIGTGTGVIALMLAQRFPEAKITAIDIAEEACRQAKENVSASPFAHQVQVEQISLQE 97 Query: 158 FSSVEGLFDVIVSNPPY 174 F S E FD IVSNPP+ Sbjct: 98 FESAE-RFDCIVSNPPF 113 >gi|242129429|gb|ACS83764.1| N-methyl transferase [Nonomuraea sp. WU8817] Length = 372 Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 41/128 (32%), Positives = 58/128 (45%), Gaps = 18/128 (14%) Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 LDL G G L S + V+I+ A + ++N NG+ +R + D + +V Sbjct: 149 LDLCAGPGVQALTASLRSD--RVTAVEINPVAAALCRTNIAMNGLGDRMEVRLGDLYGAV 206 Query: 162 EG-LFDVIVSNPPYI---ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217 G +FD IVSNPP + E V +G DGG DG TI DG+ HL Sbjct: 207 PGEVFDDIVSNPPLLPVPEDVQFAFVG------------DGGRDGFDISWTILDGLPEHL 254 Query: 218 NKDGLCSV 225 + G C + Sbjct: 255 SDRGACRI 262 >gi|292898288|ref|YP_003537657.1| ribosomal RNA small subunit methyltransferase C [Erwinia amylovora ATCC 49946] gi|291198136|emb|CBJ45241.1| ribosomal RNA small subunit methyltransferase C (rRNA (guanine-N(2)-)-methyltransferase) [Erwinia amylovora ATCC 49946] Length = 342 Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 43/159 (27%), Positives = 70/159 (44%), Gaps = 30/159 (18%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LD+G G G + L SP + D++ A+ +K+ N + D S+ +S Sbjct: 199 KVLDVGCGAGVLSAMLASFSPKVRLTLTDVNAAAIASSKATLAANQLEG--DVFASNVWS 256 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 + G FD+I+SNPP+ + V + SLD +T+ G HLN Sbjct: 257 DISGRFDMIMSNPPFHDGV--------------QTSLDAA-------QTLIRGAVSHLNT 295 Query: 220 DG----LCSVEIGYNQKVDVVRIFESRKLFLVNA-FKDY 253 G + + + Y Q +D F S ++ L N FK Y Sbjct: 296 GGELRIVANAFLPYPQVLD--EAFGSHEVLLQNGRFKVY 332 >gi|257469306|ref|ZP_05633400.1| ribosomal RNA small subunit methyltransferase C [Fusobacterium ulcerans ATCC 49185] gi|317063553|ref|ZP_07928038.1| ribosomal RNA small subunit methyltransferase C [Fusobacterium ulcerans ATCC 49185] gi|313689229|gb|EFS26064.1| ribosomal RNA small subunit methyltransferase C [Fusobacterium ulcerans ATCC 49185] Length = 225 Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 28/78 (35%), Positives = 42/78 (53%), Gaps = 1/78 (1%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 +ILD+GTG G + + L + G+DI + +E+A+ N N + E + D Sbjct: 43 KILDIGTGNGVIPILLSSKEKGEDITGIDIQEENIELAEKNIELNCLKENIKIVHGDVKE 102 Query: 160 -SVEGLFDVIVSNPPYIE 176 S+ FD IVSNPPY+E Sbjct: 103 YSMGNSFDYIVSNPPYME 120 >gi|331092559|ref|ZP_08341380.1| hypothetical protein HMPREF9477_02023 [Lachnospiraceae bacterium 2_1_46FAA] gi|330400671|gb|EGG80277.1| hypothetical protein HMPREF9477_02023 [Lachnospiraceae bacterium 2_1_46FAA] Length = 246 Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 31/114 (27%), Positives = 62/114 (54%), Gaps = 14/114 (12%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 +D+ L + R++K + ++LD+GTGTG + + L ++ G++I ++ ++A+ + Sbjct: 32 MDAVLLSNFARVKKGE--KVLDIGTGTGIIPILLEAKTEGEHFTGLEIQEESADMARRSV 89 Query: 142 VTNGVSERFDTLQSD------WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRD 189 N + ++ D + D F SV FDV+ +NPPY ++ GL+ +D Sbjct: 90 AYNHLEDKIDIVTGDVKEAVNLFGSV--FFDVVTTNPPY----MIGAHGLQNKD 137 >gi|313897519|ref|ZP_07831062.1| methyltransferase small domain protein [Clostridium sp. HGF2] gi|312957889|gb|EFR39514.1| methyltransferase small domain protein [Clostridium sp. HGF2] Length = 220 Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 30/94 (31%), Positives = 54/94 (57%), Gaps = 4/94 (4%) Query: 83 DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142 D+AL +++K + R+LD+GT GA+ LA + +P + G+DI +A+ +A+ N Sbjct: 28 DTALLAQFMKVKKGE--RVLDIGTNNGALLLAAHRYAPSYL-YGIDIQPEAIAVAEKNME 84 Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE 176 + ++ Q +++E + DVIV NPPY + Sbjct: 85 HHHITNVVLMAQDICDAALEKV-DVIVCNPPYFK 117 >gi|152978607|ref|YP_001344236.1| 16S ribosomal RNA m2G1207 methyltransferase [Actinobacillus succinogenes 130Z] gi|226712985|sp|A6VMV4|RSMC_ACTSZ RecName: Full=Ribosomal RNA small subunit methyltransferase C; AltName: Full=16S rRNA m2G1207 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rsmC gi|150840330|gb|ABR74301.1| rRNA (guanine-N(2)-)-methyltransferase [Actinobacillus succinogenes 130Z] Length = 333 Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 26/78 (33%), Positives = 45/78 (57%), Gaps = 2/78 (2%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LDLG G G + + +++P + + DI AL A+ N ++ + L SD FS Sbjct: 197 VLDLGCGAGVLGAYVKQQNPQARVMLTDIHAMALASAERTLAENRLAGK--VLASDVFSH 254 Query: 161 VEGLFDVIVSNPPYIESV 178 ++G FD+I+SNPP+ + + Sbjct: 255 IQGKFDLIISNPPFHDGI 272 >gi|288554716|ref|YP_003426651.1| ribosomal RNA methyltransferase [Bacillus pseudofirmus OF4] gi|288545876|gb|ADC49759.1| ribosomal RNA methyltransferase [Bacillus pseudofirmus OF4] Length = 201 Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 32/97 (32%), Positives = 55/97 (56%), Gaps = 9/97 (9%) Query: 78 TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137 + LL+D AF++P + +LD+G G G + LA+ + VD++ +AL++A Sbjct: 46 SRLLID---AFTMPEVSGA----LLDVGCGYGPIGLAVASIDKEREVHMVDVNVRALDLA 98 Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPP 173 + NA+ NG+S D +SD V+G + I++NPP Sbjct: 99 RKNAMNNGIS-NVDIYESDTLGQVKGDQYAAILTNPP 134 >gi|313664901|ref|YP_004046772.1| methyltransferase small domain protein [Mycoplasma leachii PG50] gi|312949410|gb|ADR24006.1| methyltransferase small domain protein [Mycoplasma leachii PG50] Length = 240 Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 4/80 (5%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW-- 157 +I D GT + L L K + K +GV+I KA+EIAK N N + E+ + + +D Sbjct: 43 KICDFGTNNAVIPLILSKYTRA-KIIGVEIQHKAVEIAKQNIKLNNLEEQIEIVHTDIKE 101 Query: 158 FSSVEGL-FDVIVSNPPYIE 176 FS + FD++V NPP+ + Sbjct: 102 FSKLHNQEFDLVVCNPPFFK 121 >gi|307155281|ref|YP_003890665.1| type 12 methyltransferase [Cyanothece sp. PCC 7822] gi|306985509|gb|ADN17390.1| Methyltransferase type 12 [Cyanothece sp. PCC 7822] Length = 399 Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 34/93 (36%), Positives = 50/93 (53%), Gaps = 6/93 (6%) Query: 84 SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143 +A F + R+ +RILD G GTG L+ +P + VG+D+S KALEIA+ Sbjct: 41 AAYNFCCGQKPPRENIRILDAGCGTGVGTEYLILLNPQAEIVGIDLSEKALEIAQERCRR 100 Query: 144 NGVSER------FDTLQSDWFSSVEGLFDVIVS 170 +GVS + F L+ + S + G FD+I S Sbjct: 101 SGVSAKHGSTVSFHHLKLEEASQLSGEFDLINS 133 >gi|75906230|ref|YP_320526.1| methyltransferase [Anabaena variabilis ATCC 29413] gi|75699955|gb|ABA19631.1| probable methyltransferase [Anabaena variabilis ATCC 29413] Length = 267 Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 30/80 (37%), Positives = 44/80 (55%), Gaps = 8/80 (10%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS---D 156 RILDLG GTG + L +L+ P + + +D S + LE A+ ++G ER+ LQ+ D Sbjct: 72 RILDLGCGTGELSLKILQRCPNAQVIALDYSPRMLEFAQHKIASSGYKERWTGLQADFGD 131 Query: 157 WFSSVEGL-----FDVIVSN 171 W + E L FD VS+ Sbjct: 132 WAINPETLNIGNEFDACVSS 151 >gi|297560902|ref|YP_003679876.1| methyltransferase small [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296845350|gb|ADH67370.1| methyltransferase small [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 223 Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 21/95 (22%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV-SERFDTLQSDWF 158 R+LDLG G G + L + +P + +GVD++ +A+ +A+ NA +G+ + RF ++ + Sbjct: 61 RLLDLGCGYGPIALTMASRAPGARVLGVDVNARAVGLARRNAAEHGLDNARFAVVEPEGG 120 Query: 159 SSVE--------------------GLFDVIVSNPP 173 SVE G FD + SNPP Sbjct: 121 LSVERGASGEGAPARDDVTAQDLLGPFDAVWSNPP 155 >gi|290960213|ref|YP_003491395.1| methyltransferase [Streptomyces scabiei 87.22] gi|260649739|emb|CBG72855.1| putative methyltransferase [Streptomyces scabiei 87.22] Length = 260 Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 38/107 (35%), Positives = 55/107 (51%), Gaps = 10/107 (9%) Query: 72 FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131 + P+ +TELLV +L R R+LD+GTGTGAV LA + VDIS Sbjct: 14 YAPQDDTELLV-----HALGREPLAPRARVLDVGTGTGAVALAAARRGADV--TAVDISR 66 Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIES 177 +A+ + NA+ + ++ D V E FD+I+SNPPY+ Sbjct: 67 RAVLNTRVNALLARLP--VTVVRGDLLGPVAERSFDLILSNPPYVPG 111 >gi|268679933|ref|YP_003304364.1| methyltransferase small [Sulfurospirillum deleyianum DSM 6946] gi|268617964|gb|ACZ12329.1| methyltransferase small [Sulfurospirillum deleyianum DSM 6946] Length = 233 Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 28/81 (34%), Positives = 42/81 (51%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+LD+G G G + L L ++ P + +DI K EIA +NA+ N + T + Sbjct: 32 RVLDVGCGCGILGLLLKRDFPTLEVHLLDIQAKNCEIAHANALANHLEMEAFTCKDFLEE 91 Query: 160 SVEGLFDVIVSNPPYIESVIV 180 E FD I+SNPP+ +V Sbjct: 92 RFEFKFDFIISNPPFYHQGVV 112 >gi|158148277|emb|CAP12595.1| ElmF protein [Streptomyces olivaceus] Length = 399 Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 62/215 (28%), Positives = 93/215 (43%), Gaps = 30/215 (13%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRS---LKHE---SIHRILG-- 56 R + +F RV LSS V VD +VL R+ + +A + L S+H +LG Sbjct: 96 RQAQAFRSRV--LSSLLVPVDEGAVLALRRAPDIRDACAEAGCPLDRPFVCSLHALLGMT 153 Query: 57 ----WRDFYNVRLTLSSDTFEPR-----PETELLVDSALAFSLPRIEKRDVVRILDLGTG 107 WR L PR P+ VD +LP R +V D+GTG Sbjct: 154 GAREWRRKGVEVPALGGARIHPRYGVFAPQRGEYVDLVARATLPDTGARPLV-AFDIGTG 212 Query: 108 TGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDV 167 TG V A+L + V D++ +AL A+ N G++ER +++D F + Sbjct: 213 TG-VLAAVLARRGVPEVVATDLNPRALACARENLDRLGLAERVTVMEADLFPPRR-RASL 270 Query: 168 IVSNPPY--------IESVIVDCLGLEVRDFDPRI 194 +V NPP+ +ES + D G +R F R+ Sbjct: 271 VVCNPPWLPAKPTSELESAVYDPGGRMLRAFLERL 305 >gi|240948233|ref|ZP_04752619.1| 16S ribosomal RNA m2G1207 methyltransferase [Actinobacillus minor NM305] gi|240297272|gb|EER47813.1| 16S ribosomal RNA m2G1207 methyltransferase [Actinobacillus minor NM305] Length = 328 Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 4/99 (4%) Query: 82 VDSALAFSLPRIEKRDVVR--ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKS 139 +D L K D ++ +LDLG G G + +L K P K DI AL ++ Sbjct: 171 LDGGTKLLLSTFHKADGLKGDVLDLGCGAGVIGASLKKMFPKIKLTMSDIHAMALASSER 230 Query: 140 NAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESV 178 N + + + SD FS ++G FD+I+SNPP+ + + Sbjct: 231 TLAENQLEGK--VIASDVFSHIDGRFDLIISNPPFHDGI 267 >gi|239982473|ref|ZP_04704997.1| putative methylase [Streptomyces albus J1074] gi|291454321|ref|ZP_06593711.1| modification methylase [Streptomyces albus J1074] gi|291357270|gb|EFE84172.1| modification methylase [Streptomyces albus J1074] Length = 132 Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 26/71 (36%), Positives = 37/71 (52%) Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220 + G V+V+N PY+ + + L E R +PR++LDGG DGL+ R +A R L Sbjct: 28 LRGRVAVLVANVPYVPTADLPLLPSEARTHEPRVALDGGDDGLAVLRRVAAEAGRWLAPG 87 Query: 221 GLCSVEIGYNQ 231 G VE Q Sbjct: 88 GTLLVETTGRQ 98 >gi|213401603|ref|XP_002171574.1| mitochondrial N(5)-glutamine methyltransferase MTQ1 [Schizosaccharomyces japonicus yFS275] gi|211999621|gb|EEB05281.1| mitochondrial N(5)-glutamine methyltransferase MTQ1 [Schizosaccharomyces japonicus yFS275] Length = 303 Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 55/229 (24%), Positives = 95/229 (41%), Gaps = 18/229 (7%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD----VVRILDLGT 106 + +LG F + L F PR ET V L + E+ + ++D+ T Sbjct: 62 LQYVLGSESFGPLNLQCRKGVFIPRWETYEWVLRCLPYMKQLYEQAHDDSRPLEVVDMCT 121 Query: 107 GTGAVCLALLKESPFFKGV---GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG 163 G+G C+A S V +D+S KAL +A+ N R +++D V+ Sbjct: 122 GSG--CIAQFVASALHDRVHVTAIDVSMKALALARHNNREEVCRGRVGFVRADVLKQVDV 179 Query: 164 LF------DVIVSNPPYIESV-IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR- 215 DV++ NPPYI +V VR ++P ++L G + YR + + R Sbjct: 180 WLPFVARCDVLLCNPPYISDADLVRVTSSSVRRYEPLLALCADECGDAFYRKVLREIHRA 239 Query: 216 HLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 + + + E+G ++ V S + + +KD G +R + R Sbjct: 240 AVYRPRYIAFEVGDKEQAKRVVQLASPH-WNASIWKDSAGLERCVFLER 287 >gi|170721831|ref|YP_001749519.1| methyltransferase small [Pseudomonas putida W619] gi|169759834|gb|ACA73150.1| methyltransferase small [Pseudomonas putida W619] Length = 317 Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 4/84 (4%) Query: 95 KRDVVRI---LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151 +R VRI +D+G G+G L + + + + VDI+ AL NA GVS Sbjct: 132 QRSPVRIERAVDIGCGSGVGALLVARAAQHAQVCAVDINPVALRYTAINAALAGVSN-VS 190 Query: 152 TLQSDWFSSVEGLFDVIVSNPPYI 175 SD + + G FD+IV+NPPY+ Sbjct: 191 IAHSDLLAGISGNFDLIVANPPYM 214 >gi|323141894|ref|ZP_08076755.1| ribosomal protein L11 methyltransferase [Phascolarctobacterium sp. YIT 12067] gi|322413641|gb|EFY04499.1| ribosomal protein L11 methyltransferase [Phascolarctobacterium sp. YIT 12067] Length = 311 Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 42/166 (25%), Positives = 78/166 (46%), Gaps = 35/166 (21%) Query: 57 WRDFYNVR-------LTLSSDTFEPRP-ETELLVDSALAFS----------LPRIEKRDV 98 W+ +++V + S + + P+ E + +D +AF + R+EK V Sbjct: 113 WKQYFHVTHVGKSLVIKPSWEEYAPKEGEHVIEIDPGMAFGTGTHHTTNMMMERLEK--V 170 Query: 99 VR----ILDLGTGTG--AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152 + + D+GTG+G A+ A+L VDI A+ +AK N NG+SE+ + Sbjct: 171 ITPDSTVFDVGTGSGILAIAAAMLGAKSVK---AVDIDGVAVRVAKENVADNGLSEQIEV 227 Query: 153 LQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG 198 + D EG DVI++N +I D + + ++D +++ +G Sbjct: 228 REGDLLHGTEGKADVIIAN------IIADIVIMLLQDIPQKLNDNG 267 >gi|300786180|ref|YP_003766471.1| methyltransferase [Amycolatopsis mediterranei U32] gi|299795694|gb|ADJ46069.1| methyltransferase [Amycolatopsis mediterranei U32] Length = 239 Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 37/111 (33%), Positives = 58/111 (52%), Gaps = 17/111 (15%) Query: 72 FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG----V 127 + P+ +T LL + ++P R LDL TGTGA + L + +G G V Sbjct: 36 YRPQEDTALLASAIAELAIP-----AGARALDLCTGTGAQAITLAR-----RGAGTVLAV 85 Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIES 177 D+S +AL A+ NA+ ++ R + ++ EG FDV+V+NPPY+ S Sbjct: 86 DLSRRALASARLNALVRQLAVR--PCRGGLARALREGPFDVVVANPPYVPS 134 >gi|29833736|ref|NP_828370.1| methyltransferas [Streptomyces avermitilis MA-4680] gi|29610860|dbj|BAC74905.1| putative methyltransferase [Streptomyces avermitilis MA-4680] Length = 221 Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 38/107 (35%), Positives = 59/107 (55%), Gaps = 10/107 (9%) Query: 72 FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131 + P+ +T+LL A +L R + +LDLGTG+GA LA+ + VDIS Sbjct: 16 YAPQHDTDLL-----ARALRREDIDTSTEVLDLGTGSGA--LAVHAARLGARVTAVDISR 68 Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIES 177 +A+ A+ NA+ G R + D ++V G +D++VSNPPY+ S Sbjct: 69 RAVLTARLNALLAG--RRVTVRRGDLTAAVPGRSYDLVVSNPPYVPS 113 >gi|85859820|ref|YP_462022.1| methyltransferase [Syntrophus aciditrophicus SB] gi|85722911|gb|ABC77854.1| methyltransferase [Syntrophus aciditrophicus SB] Length = 254 Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 6/79 (7%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LD+GTG+G + L P + G+DI + +E+A +A N + ER T ++ S Sbjct: 48 LLDMGTGSGVIALITAMRRPDVRIAGIDIQEEMVEMASRSAALNSLEERL-TFKAGDIHS 106 Query: 161 VEGL-----FDVIVSNPPY 174 + + FD +V NPPY Sbjct: 107 IRRIFDSESFDAVVVNPPY 125 >gi|313114746|ref|ZP_07800248.1| ribosomal protein L11 methyltransferase [Faecalibacterium cf. prausnitzii KLE1255] gi|310622971|gb|EFQ06424.1| ribosomal protein L11 methyltransferase [Faecalibacterium cf. prausnitzii KLE1255] Length = 304 Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 39/134 (29%), Positives = 59/134 (44%), Gaps = 19/134 (14%) Query: 56 GWRDFYNV-----RLTLSSDTFEPRPE-TELLVDSALAFSLPRIEKRDVV---------- 99 GWR +Y+ RL + + + +L++D LAF E + Sbjct: 108 GWRKYYHPLEIGKRLAVVPSWQQYDTDRVKLILDPGLAFGTGGHETTSLCMEALDERVTG 167 Query: 100 --RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 R+LD+GTG+G + +A LK GVDI A+ A NA NGV ++ L D Sbjct: 168 GERVLDIGTGSGILAIAALKLGAAV-AEGVDIDPVAVRTAGENAALNGVQDKLTVLVGDL 226 Query: 158 FSSVEGLFDVIVSN 171 G +D+I +N Sbjct: 227 SDKASGKYDIITAN 240 >gi|260829457|ref|XP_002609678.1| hypothetical protein BRAFLDRAFT_123579 [Branchiostoma floridae] gi|229295040|gb|EEN65688.1| hypothetical protein BRAFLDRAFT_123579 [Branchiostoma floridae] Length = 1095 Score = 49.3 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 49/155 (31%), Positives = 74/155 (47%), Gaps = 16/155 (10%) Query: 105 GTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL 164 G G A+ A E + + +DI LE A+ NA GV++R + LQ D+ EGL Sbjct: 947 GVGGNAIQFAFTCE----RVIAIDIDPVKLECARHNAAIYGVADRIEFLQGDYLHLAEGL 1002 Query: 165 -FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS----RHLNK 219 DV+ +PP+ D L +V D I D G + + I D ++ R+ + Sbjct: 1003 KADVVFLSPPWGGP---DYLTADVFDIKTMIVPD-GYEIFEKTKQITDNIAYFVPRNADV 1058 Query: 220 DGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYG 254 + L S+ G KV+V + F +RKL V A+ YG Sbjct: 1059 EQLVSLA-GPGGKVEVEQNFLNRKLKTVTAY--YG 1090 >gi|55820852|ref|YP_139294.1| hypothetical protein stu0800 [Streptococcus thermophilus LMG 18311] gi|55822767|ref|YP_141208.1| hypothetical protein str0800 [Streptococcus thermophilus CNRZ1066] gi|55736837|gb|AAV60479.1| conserved hypothetical protein [Streptococcus thermophilus LMG 18311] gi|55738752|gb|AAV62393.1| conserved hypothetical protein [Streptococcus thermophilus CNRZ1066] Length = 213 Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 3/73 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LD+G G G + ++L K + +DI+ +A+++AK NA NGV QS+ + + Sbjct: 78 LLDVGCGYGPLGISLAKVQGV-QSTMIDINSRAIDLAKKNAERNGVVAHI--FQSNIYEN 134 Query: 161 VEGLFDVIVSNPP 173 V FD I+SNPP Sbjct: 135 VSEKFDYIISNPP 147 >gi|283769526|ref|ZP_06342422.1| conserved hypothetical protein [Bulleidia extructa W1219] gi|283103794|gb|EFC05180.1| conserved hypothetical protein [Bulleidia extructa W1219] Length = 209 Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 32/82 (39%), Positives = 45/82 (54%), Gaps = 3/82 (3%) Query: 93 IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152 +E D +LD+G GA+ L KE G+GVD+ + LE AK NA+ N V+ +F Sbjct: 28 LEVYDGETVLDIGCNQGAL-LYYAKEKADIIGIGVDVFSEVLESAKENAIYNRVNFQFVC 86 Query: 153 LQSDWFSSVEGLFDVIVSNPPY 174 + + + L DVIV NPPY Sbjct: 87 SRIQEYKA--ELVDVIVCNPPY 106 >gi|326334037|ref|ZP_08200266.1| putative protein-(glutamine-N5) methyltransferase, release factor-specific [Nocardioidaceae bacterium Broad-1] gi|325948186|gb|EGD40297.1| putative protein-(glutamine-N5) methyltransferase, release factor-specific [Nocardioidaceae bacterium Broad-1] Length = 231 Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 42/167 (25%), Positives = 78/167 (46%), Gaps = 10/167 (5%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +L+L +G G + L L + V VD A A++NA G+S + S + Sbjct: 51 MLELCSGAGQIGL-LAAALVGRRLVCVDADPVACAFARANAERAGLSHLVEVRHSSMDQA 109 Query: 161 VEG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 ++ F +++++PP++ + V DP +++DGG DG+ RT +RHL+ Sbjct: 110 LDPDERFHLVIADPPWVPTAQVGRY-----PEDPLLAIDGGADGMQVARTCLATTARHLS 164 Query: 219 KDGLCSVEIGYNQKVD-VVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 G +++G + D V+++ E L V +D G ++ R Sbjct: 165 PGGAAVLQLGTTDQADRVLQLLEGSDLA-VEEVRDSPGEGVLVHIAR 210 >gi|326203864|ref|ZP_08193726.1| methyltransferase small [Clostridium papyrosolvens DSM 2782] gi|325985962|gb|EGD46796.1| methyltransferase small [Clostridium papyrosolvens DSM 2782] Length = 198 Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 30/76 (39%), Positives = 45/76 (59%), Gaps = 3/76 (3%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 + +LD+G G GA+ L + P +D++ +ALE K NA +N +S + L S+ F Sbjct: 59 LSVLDIGCGYGAIGLFIKSIFPQQTITMIDVNNRALEYTKKNAASNNLS--IEALNSNLF 116 Query: 159 SSV-EGLFDVIVSNPP 173 SS+ E FD I+SNPP Sbjct: 117 SSLNERTFDDIISNPP 132 >gi|226713004|sp|Q8EIL1|RSMC_SHEON RecName: Full=Ribosomal RNA small subunit methyltransferase C; AltName: Full=16S rRNA m2G1207 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rsmC Length = 342 Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 26/75 (34%), Positives = 36/75 (48%), Gaps = 2/75 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+LD G G G + LLK P +DI+ AL + NG+ + SD + Sbjct: 204 RVLDFGCGAGVIAATLLKAQPTLSLECIDINAMALASCELTLAANGMMAK--VYPSDGLA 261 Query: 160 SVEGLFDVIVSNPPY 174 G FD I+SNPP+ Sbjct: 262 QTSGKFDGIISNPPF 276 >gi|319937658|ref|ZP_08012061.1| 16S rRNA m(2)G 1207 methyltransferase [Coprobacillus sp. 29_1] gi|319807093|gb|EFW03707.1| 16S rRNA m(2)G 1207 methyltransferase [Coprobacillus sp. 29_1] Length = 201 Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 28/73 (38%), Positives = 42/73 (57%), Gaps = 1/73 (1%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LD+G G G + ++L KE P+ VD++ +A+ +A + N V E S + + Sbjct: 61 LLDVGCGYGTLGVSLKKEYPWLHVEMVDVNERAVHLANQSCQYNDV-EDIKAYLSFAYEN 119 Query: 161 VEGLFDVIVSNPP 173 V G FDVIVSNPP Sbjct: 120 VVGTFDVIVSNPP 132 >gi|91785360|ref|YP_560566.1| hypothetical protein Bxe_A0419 [Burkholderia xenovorans LB400] gi|91689314|gb|ABE32514.1| Conserved hypothetical protein [Burkholderia xenovorans LB400] Length = 374 Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 33/107 (30%), Positives = 55/107 (51%), Gaps = 4/107 (3%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 + D+GTGTG V ALL + K + D +AL A+ N G + + +Q+D F Sbjct: 198 KAFDIGTGTG-VLAALLAKRGVKKIIATDQDPRALACARENLTRLGYDRQVEVVQADLFP 256 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206 EG ++V NPP++ + + + D + R+ L G ++GLS + Sbjct: 257 --EGRAPLVVCNPPWLPARPASPIEYAIYDPESRMLL-GFLNGLSEH 300 >gi|218439584|ref|YP_002377913.1| methyltransferase type 12 [Cyanothece sp. PCC 7424] gi|218172312|gb|ACK71045.1| Methyltransferase type 12 [Cyanothece sp. PCC 7424] Length = 399 Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 6/91 (6%) Query: 84 SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143 +A F + R+ +RILD G GTG L+ +P + VG+D+S KALEIA+ + Sbjct: 41 AAYNFCTRQKPSRENIRILDAGCGTGVGTEYLILLNPQAEIVGIDLSEKALEIAQERSRR 100 Query: 144 NGVSER------FDTLQSDWFSSVEGLFDVI 168 +GVS + F L+ + S + G FD+I Sbjct: 101 SGVSAKHEASVSFHHLKLEEASQLPGEFDLI 131 >gi|23014220|ref|ZP_00054048.1| COG4123: Predicted O-methyltransferase [Magnetospirillum magnetotacticum MS-1] Length = 250 Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 31/87 (35%), Positives = 40/87 (45%), Gaps = 2/87 (2%) Query: 93 IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152 + R RILDLG G GA L LL P G++I +A+ NAV N F Sbjct: 39 VPARPGERILDLGCGVGAAALCLLARCPDVVVEGLEIQGPLAGLARRNAVLNEAERGFAV 98 Query: 153 LQSDWFSSVEGL--FDVIVSNPPYIES 177 D GL F +++NPP+ ES Sbjct: 99 HAGDAARPPAGLGGFHHVMTNPPFFES 125 >gi|323486486|ref|ZP_08091809.1| methyltransferase type 11 [Clostridium symbiosum WAL-14163] gi|323694373|ref|ZP_08108546.1| methyltransferase type 11 [Clostridium symbiosum WAL-14673] gi|323400189|gb|EGA92564.1| methyltransferase type 11 [Clostridium symbiosum WAL-14163] gi|323501613|gb|EGB17502.1| methyltransferase type 11 [Clostridium symbiosum WAL-14673] Length = 245 Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 31/96 (32%), Positives = 51/96 (53%), Gaps = 12/96 (12%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 + LDLGTGTG + + L ++ G++I + ++A + NG+ +R D ++ D Sbjct: 48 KALDLGTGTGIIPILLEAKTKGEHFTGLEIQEEMADMASRSVELNGLKDRIDIIRGDIKE 107 Query: 160 SVEGL------FDVIVSNPPYIESVIVDCLGLEVRD 189 + GL FDV+ +NPPY+ DC GL+ D Sbjct: 108 A--GLIFGGASFDVVTTNPPYMN----DCHGLKNPD 137 >gi|312863385|ref|ZP_07723623.1| methyltransferase small domain protein [Streptococcus vestibularis F0396] gi|322516989|ref|ZP_08069879.1| methyltransferase domain protein [Streptococcus vestibularis ATCC 49124] gi|311100921|gb|EFQ59126.1| methyltransferase small domain protein [Streptococcus vestibularis F0396] gi|322124472|gb|EFX95967.1| methyltransferase domain protein [Streptococcus vestibularis ATCC 49124] Length = 196 Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 29/76 (38%), Positives = 45/76 (59%), Gaps = 9/76 (11%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGV---DISCKALEIAKSNAVTNGVSERFDTLQSDW 157 +LD+G G G + ++L K +GV V DI+ +A+++AK NA N V QS+ Sbjct: 61 VLDVGCGYGPLGISLAK----VQGVKVTMIDINSRAIDLAKQNAERNKVEATI--FQSNI 114 Query: 158 FSSVEGLFDVIVSNPP 173 + +V G FD ++SNPP Sbjct: 115 YKNVTGSFDYVISNPP 130 >gi|269929311|ref|YP_003321632.1| methylase [Sphaerobacter thermophilus DSM 20745] gi|269788668|gb|ACZ40810.1| methylase [Sphaerobacter thermophilus DSM 20745] Length = 566 Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 31/82 (37%), Positives = 48/82 (58%), Gaps = 3/82 (3%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LDLGTG+G A++ + V VDI+ A+ A+ NA +NGV++R + Q D F+ Sbjct: 399 VLDLGTGSG--VGAIVAARRAARVVAVDINPAAVRCAQINAASNGVNDRVEVRQGDLFAP 456 Query: 161 VEG-LFDVIVSNPPYIESVIVD 181 V G FD+++ NPP+ D Sbjct: 457 VAGERFDLVLFNPPFYRGTPRD 478 >gi|251782462|ref|YP_002996764.1| 16S rRNA m(2)G 1207 methyltransferase [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|242391091|dbj|BAH81550.1| 16S rRNA m(2)G 1207 methyltransferase [Streptococcus dysgalactiae subsp. equisimilis GGS_124] Length = 210 Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 28/74 (37%), Positives = 44/74 (59%), Gaps = 3/74 (4%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+LDLG G G + ++L K + VDI+ +A+++A+ NA N V QS+ + Sbjct: 71 RVLDLGCGYGPLGISLAKVQEV-EATLVDINNRAIDLAQKNARQNQVD--VTIFQSNIYE 127 Query: 160 SVEGLFDVIVSNPP 173 +V G F+ I+SNPP Sbjct: 128 NVRGSFNHIISNPP 141 >gi|24372417|ref|NP_716459.1| hypothetical protein SO_0828 [Shewanella oneidensis MR-1] gi|24346386|gb|AAN53904.1|AE015527_6 conserved hypothetical protein [Shewanella oneidensis MR-1] Length = 353 Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 26/75 (34%), Positives = 36/75 (48%), Gaps = 2/75 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+LD G G G + LLK P +DI+ AL + NG+ + SD + Sbjct: 215 RVLDFGCGAGVIAATLLKAQPTLSLECIDINAMALASCELTLAANGMMAK--VYPSDGLA 272 Query: 160 SVEGLFDVIVSNPPY 174 G FD I+SNPP+ Sbjct: 273 QTSGKFDGIISNPPF 287 >gi|325578684|ref|ZP_08148760.1| ribosomal RNA small subunit methyltransferase C [Haemophilus parainfluenzae ATCC 33392] gi|325159723|gb|EGC71854.1| ribosomal RNA small subunit methyltransferase C [Haemophilus parainfluenzae ATCC 33392] Length = 330 Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 2/79 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LD+G G G + + K P + DI A++ A+ N + + + SD FS Sbjct: 193 KVLDVGCGAGVIGSMIKKYHPKTEVTMTDIHAMAIQSARQTLAENQLEG--NVIASDVFS 250 Query: 160 SVEGLFDVIVSNPPYIESV 178 +EG FD+I+SNPP+ + + Sbjct: 251 HIEGKFDLIISNPPFHDGI 269 >gi|78358540|ref|YP_389989.1| hypothetical protein Dde_3501 [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78220945|gb|ABB40294.1| conserved hypothetical protein [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 275 Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 30/82 (36%), Positives = 40/82 (48%), Gaps = 6/82 (7%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 +R LD GTG G V LAL +G G DI + + A NA G+ RF +Q+D Sbjct: 56 LRFLDAGTGCGVVGLALCLLLDTVQGTGFDIDPQLADAATHNAAMLGLGNRFSAVQADAQ 115 Query: 159 SS------VEGLFDVIVSNPPY 174 FD++V+NPPY Sbjct: 116 QVRAHADITPESFDLVVTNPPY 137 >gi|260775422|ref|ZP_05884319.1| predicted O-methyltransferase [Vibrio coralliilyticus ATCC BAA-450] gi|260608603|gb|EEX34768.1| predicted O-methyltransferase [Vibrio coralliilyticus ATCC BAA-450] Length = 239 Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 29/78 (37%), Positives = 41/78 (52%), Gaps = 1/78 (1%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS- 159 +LD+GTGTG + L + +P +DI AL+ +K N ++ S R L+ D S Sbjct: 46 LLDIGTGTGLLALMCAQRNPDCVIDAIDIDQHALQASKENFTSSPWSSRLSLLEGDVLSF 105 Query: 160 SVEGLFDVIVSNPPYIES 177 E +D IV NPPY S Sbjct: 106 PFETSYDAIVCNPPYFNS 123 >gi|159149040|dbj|BAF92588.1| methyltransferase [Streptomyces pactum] gi|212379246|gb|ACJ24862.1| HemK family methyltransferase [Streptomyces pactum] Length = 358 Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 41/128 (32%), Positives = 61/128 (47%), Gaps = 12/128 (9%) Query: 95 KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154 +RDV LDLG GTG + L+ + V V+ C A A NA NG+ ER ++ Sbjct: 147 RRDVRTALDLGCGTGILGLSAARNGADVVSVDVNPECTA--AATVNAHINGLGERLTAVE 204 Query: 155 SDWFS-SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213 D S ++ FD+++SNPP CL L R ++ + G+DGL + + V Sbjct: 205 GDIMSLDLDRRFDLVISNPP--------CLPLR-RGSLGWLAGEAGLDGLEFFWELLRRV 255 Query: 214 SRHLNKDG 221 L +G Sbjct: 256 PGLLTGEG 263 >gi|300775903|ref|ZP_07085763.1| methyltransferase [Chryseobacterium gleum ATCC 35910] gi|300505453|gb|EFK36591.1| methyltransferase [Chryseobacterium gleum ATCC 35910] Length = 230 Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 26/77 (33%), Positives = 43/77 (55%), Gaps = 1/77 (1%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS- 159 +L++GTGTG + L L + +P + +G+DI+ A ++ + N + R D+ + Sbjct: 39 VLEVGTGTGLISLMLAQRNPHAEFLGLDINEDAAQLTRLNFENSPFRLRLKNSHQDFKTF 98 Query: 160 SVEGLFDVIVSNPPYIE 176 FD+IVSNPPY E Sbjct: 99 ETSDRFDLIVSNPPYFE 115 >gi|309779561|ref|ZP_07674322.1| methyltransferase [Ralstonia sp. 5_7_47FAA] gi|308921802|gb|EFP67438.1| methyltransferase [Ralstonia sp. 5_7_47FAA] Length = 384 Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 34/104 (32%), Positives = 55/104 (52%), Gaps = 4/104 (3%) Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162 D+GTGTG V A+L + + +G D +AL A+ N G+ + D + +D F E Sbjct: 210 DIGTGTG-VLAAVLAKRGVKRVIGTDQDPRALACARENLARLGLQAQVDVVDADLFP--E 266 Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206 G +IV NPP++ + + V D D R+ L G ++GL+ + Sbjct: 267 GRAPLIVCNPPWLPARPSSPIERAVYDPDSRM-LRGFLEGLAAH 309 >gi|217977297|ref|YP_002361444.1| methyltransferase small [Methylocella silvestris BL2] gi|217502673|gb|ACK50082.1| methyltransferase small [Methylocella silvestris BL2] Length = 257 Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 27/86 (31%), Positives = 46/86 (53%), Gaps = 8/86 (9%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LD+G G GA +AL P + V+I +A E+A+ N NG+++R ++D S Sbjct: 50 VLDIGAGVGAASIALAATRPGARIGLVEIDAEAAELARKNLDLNGIAQRGRVFEADALSP 109 Query: 161 ----VEGL----FDVIVSNPPYIESV 178 GL D+++SNPP+++ Sbjct: 110 PSRRAAGLADETADLVISNPPFLDPA 135 >gi|315649712|ref|ZP_07902796.1| methyltransferase small [Paenibacillus vortex V453] gi|315274900|gb|EFU38276.1| methyltransferase small [Paenibacillus vortex V453] Length = 201 Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 31/82 (37%), Positives = 47/82 (57%), Gaps = 2/82 (2%) Query: 93 IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152 +E + +LD+G G G + L K +DI+ +A+E+AK NA NG+S Sbjct: 54 MEFQQNASVLDVGCGYGPIGLTAAKMVVDGHVTMIDINSRAVELAKENARRNGIS-NVTI 112 Query: 153 LQSDWFSSVE-GLFDVIVSNPP 173 L+SD F+ V+ FDVI++NPP Sbjct: 113 LESDLFAVVKDQQFDVILTNPP 134 >gi|292558414|gb|ADE31415.1| Methyltransferase [Streptococcus suis GZ1] Length = 196 Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 29/73 (39%), Positives = 44/73 (60%), Gaps = 3/73 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LD+G G G + L L K K +DI+ +AL++A NA NGV+ + QS+ + + Sbjct: 61 VLDVGCGYGPIGLTLAKVFST-KTTLIDINSRALDLATKNAERNGVTAKI--YQSNIYEN 117 Query: 161 VEGLFDVIVSNPP 173 V+ F+ IVSNPP Sbjct: 118 VDETFNHIVSNPP 130 >gi|90021563|ref|YP_527390.1| 16S rRNA m(2)G 1207 methyltransferase [Saccharophagus degradans 2-40] gi|89951163|gb|ABD81178.1| 16S rRNA m(2)G 1207 methyltransferase [Saccharophagus degradans 2-40] Length = 361 Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 34/134 (25%), Positives = 57/134 (42%), Gaps = 19/134 (14%) Query: 41 AIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR 100 AI L +S + GW+ F +L +AF R Sbjct: 182 AICCDLPMQSKPGVYGWKKF------------------DLATQQLIAFIKQRYNNLKEHT 223 Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LDLG G+G + +A+ K D + A+ + N +TN ++E + D S Sbjct: 224 VLDLGCGSGYLSIAV-KTLHCRSLTATDNNAAAVLATQQNLITNNLAEAAQVVADDCAQS 282 Query: 161 VEGLFDVIVSNPPY 174 ++G+FD++V NPP+ Sbjct: 283 IQGMFDLVVCNPPF 296 >gi|330503343|ref|YP_004380212.1| methyltransferase small [Pseudomonas mendocina NK-01] gi|328917629|gb|AEB58460.1| methyltransferase small [Pseudomonas mendocina NK-01] Length = 322 Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 1/76 (1%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 RI D+G G G + + P + + +DI+ KAL + NA G+ +SD Sbjct: 140 RIADIGCGAGPGAITAAQLRPGAEVMALDINHKALAMTAVNARQAGIYN-LRVQRSDLLR 198 Query: 160 SVEGLFDVIVSNPPYI 175 V G FD+I++NPPY+ Sbjct: 199 DVSGQFDLIIANPPYM 214 >gi|313890214|ref|ZP_07823849.1| methyltransferase small domain protein [Streptococcus pseudoporcinus SPIN 20026] gi|313121575|gb|EFR44679.1| methyltransferase small domain protein [Streptococcus pseudoporcinus SPIN 20026] Length = 196 Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 3/73 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LD+G G G + ++L K + +DI+ +A+E+A+ NA N V QS+ + + Sbjct: 61 LLDVGCGYGPLGISLAKAQGVIATL-IDINNRAIELAQKNATYNKV--EVAIYQSNIYEN 117 Query: 161 VEGLFDVIVSNPP 173 V G FD I+SNPP Sbjct: 118 VTGQFDHIISNPP 130 >gi|306836276|ref|ZP_07469258.1| transferase [Corynebacterium accolens ATCC 49726] gi|304567868|gb|EFM43451.1| transferase [Corynebacterium accolens ATCC 49726] Length = 525 Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 3/79 (3%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 V +LDLGTG+G L L+ + D+ +AL++A + G S + ++ W Sbjct: 163 VSTVLDLGTGSGVQLLGQLECARSI--TATDVHRRALDLAGATVAAAGSSPEVELIEGSW 220 Query: 158 FSSVEG-LFDVIVSNPPYI 175 F V G FD IV+NPP++ Sbjct: 221 FEPVAGRTFDRIVANPPFV 239 >gi|262091715|gb|ACY25305.1| 16S RNA G1207 methylase RsmC [uncultured actinobacterium] Length = 225 Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 9/96 (9%) Query: 78 TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137 T++L+D+A PR LDLG G+GA+ +AL SP K +D++ +AL++ Sbjct: 71 TQILLDAA-----PRPSTTG--NFLDLGCGSGAIAMALASYSPEAKVWAIDVNARALQLV 123 Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173 NA NG+ ++ FD+I SNPP Sbjct: 124 GENAQRNGLGNITALFPQSVSPDIQ--FDLIWSNPP 157 >gi|257465571|ref|ZP_05629942.1| 16S ribosomal RNA m2G1207 methyltransferase [Actinobacillus minor 202] gi|257451231|gb|EEV25274.1| 16S ribosomal RNA m2G1207 methyltransferase [Actinobacillus minor 202] Length = 328 Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 4/99 (4%) Query: 82 VDSALAFSLPRIEKRDVVR--ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKS 139 +D L K D ++ +LDLG G G + +L K P K DI AL ++ Sbjct: 171 LDGGTKLLLSTFHKADGLKGNVLDLGCGAGVIGASLKKMFPKIKLTMSDIHAMALASSER 230 Query: 140 NAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESV 178 N + + + SD FS ++G FD+I+SNPP+ + + Sbjct: 231 TLAENQLEGK--VVASDVFSHIDGRFDLIISNPPFHDGI 267 >gi|239618491|ref|YP_002941813.1| methyltransferase small [Kosmotoga olearia TBF 19.5.1] gi|239507322|gb|ACR80809.1| methyltransferase small [Kosmotoga olearia TBF 19.5.1] Length = 204 Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 30/76 (39%), Positives = 39/76 (51%), Gaps = 5/76 (6%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE--RFDTLQSDW 157 R+LDLG G G + + L KE+P D++ +ALE AK NA N + R L W Sbjct: 66 RLLDLGCGYGVIGITLKKENPDISLCMSDVNERALEFAKINAKNNNIVADIRLGNLYEPW 125 Query: 158 FSSVEGLFDVIVSNPP 173 + FD IV NPP Sbjct: 126 KDEI---FDNIVCNPP 138 >gi|119718182|ref|YP_925147.1| methyltransferase small [Nocardioides sp. JS614] gi|119538843|gb|ABL83460.1| methyltransferase small [Nocardioides sp. JS614] Length = 222 Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 48/188 (25%), Positives = 87/188 (46%), Gaps = 28/188 (14%) Query: 60 FYNVRLTLSSDTFEPRPETELLVDSA---LAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116 F +R++ PRP T + A LA + P +L+L G G + L + Sbjct: 24 FGPLRISFDGRVLRPRPWTAAQSEWAAEILADAPPG-------PVLELCAGAGQIGLLAV 76 Query: 117 KES--PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG---LFDVIVSN 171 S P V VD++ A + A++NA G+++R + + V G F +++++ Sbjct: 77 AGSDRPL---VCVDVNPVACDYARANAQAAGLADRVEVREGS-VHEVLGDSERFALVIAD 132 Query: 172 PPYIESVIVDCLGLEVRDF--DPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY 229 PP++ EV F DP +++DGG DG++ D HL + +++G Sbjct: 133 PPWVRRE-------EVARFPEDPVLAIDGGADGMALAWLCIDTARPHLPRGASVLLQLGS 185 Query: 230 NQKVDVVR 237 ++VD++R Sbjct: 186 VEQVDLLR 193 >gi|260906701|ref|ZP_05915023.1| hypothetical protein BlinB_15332 [Brevibacterium linens BL2] Length = 439 Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 42/132 (31%), Positives = 62/132 (46%), Gaps = 13/132 (9%) Query: 76 PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135 PE SA S P+ DLGTGTG + LL+ + V DI+ +A+ Sbjct: 245 PEASAPQSSAPEPSAPQT-------AFDLGTGTGVLAAVLLRRG-VERVVATDINPRAVA 296 Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195 A+ N G++ + +++D F S G D+IV NPP++ + LE +DP Sbjct: 297 CAQENLDRLGLASSAEVVEADLFPS--GRADLIVCNPPWLPARPTSA--LEAGIYDPGSD 352 Query: 196 -LDGGIDGLSHY 206 L IDGL+ Y Sbjct: 353 VLHRFIDGLAAY 364 >gi|323706288|ref|ZP_08117854.1| methyltransferase small [Thermoanaerobacterium xylanolyticum LX-11] gi|323534340|gb|EGB24125.1| methyltransferase small [Thermoanaerobacterium xylanolyticum LX-11] Length = 248 Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 4/80 (5%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 +I+DLG GTG + + + +S + VGV+I + IA N N R D + D + Sbjct: 45 KIVDLGCGTGIIPILIAGKSRDTRIVGVEIQSEVANIAIRNVYLNNFEGRIDIINDDIRN 104 Query: 160 SVEGL----FDVIVSNPPYI 175 V+ L +D++ SNPPY+ Sbjct: 105 VVDKLGIEKYDIVTSNPPYM 124 >gi|226360731|ref|YP_002778509.1| hypothetical protein ROP_13170 [Rhodococcus opacus B4] gi|226239216|dbj|BAH49564.1| hypothetical protein [Rhodococcus opacus B4] Length = 377 Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 33/109 (30%), Positives = 56/109 (51%), Gaps = 4/109 (3%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 + + D+GTGTG V A+L K + ++ AL A++N G S+R +++D Sbjct: 194 LAKAFDIGTGTG-VLAAVLAHRGVEKVISTELDANALACARANLDRLGYSDRVQVVETDL 252 Query: 158 FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206 F EG ++V NPP+I + + + D D R+ L G + GL+ + Sbjct: 253 FP--EGRAPLVVCNPPWIPARPTSPIEYAIYDPDSRM-LRGFLAGLAEH 298 >gi|284041963|ref|YP_003392303.1| methyltransferase small [Conexibacter woesei DSM 14684] gi|283946184|gb|ADB48928.1| methyltransferase small [Conexibacter woesei DSM 14684] Length = 372 Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 32/81 (39%), Positives = 48/81 (59%), Gaps = 5/81 (6%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 V R LDL TG+G LA L ++ V V+I E A+ NA+ NG+ ER D D Sbjct: 159 VERALDLCTGSG--LLASLLDAR--HTVAVEIDPDVAEAARFNAILNGLEERIDVRAGDL 214 Query: 158 FSSVEG-LFDVIVSNPPYIES 177 +++V G F++IV+NPP++ + Sbjct: 215 YAAVPGERFELIVANPPFLPT 235 >gi|312142729|ref|YP_003994175.1| methyltransferase small [Halanaerobium sp. 'sapolanicus'] gi|311903380|gb|ADQ13821.1| methyltransferase small [Halanaerobium sp. 'sapolanicus'] Length = 241 Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 30/97 (30%), Positives = 51/97 (52%), Gaps = 6/97 (6%) Query: 83 DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142 DS L + ++ + D ++DLGTG+G + L L ++ K GV+I ++A+ N Sbjct: 26 DSVLLANFVKLRRGD--NVIDLGTGSGVIPLLLAYKNQGVKVSGVEIQKPLADLAQRNVE 83 Query: 143 TNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYI 175 N + ++ + D + G FDV+VSNPPY+ Sbjct: 84 LNQMDDKIKIINQDLCPLKQEMEAGSFDVVVSNPPYL 120 >gi|229579608|ref|YP_002838007.1| methyltransferase small [Sulfolobus islandicus Y.G.57.14] gi|228010323|gb|ACP46085.1| methyltransferase small [Sulfolobus islandicus Y.G.57.14] Length = 186 Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 29/75 (38%), Positives = 43/75 (57%), Gaps = 2/75 (2%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 + D+G G G + + L ++ K VD++ A+++AK NA NGV R L+SD F + Sbjct: 49 VADVGCGYGPIGIYLALKNHNLKVYMVDVNYIAIKLAKKNAKLNGVENRTIILKSDIFDN 108 Query: 161 --VEGLFDVIVSNPP 173 VE F+ I SNPP Sbjct: 109 VPVEVKFNAIYSNPP 123 >gi|238761895|ref|ZP_04622869.1| Ribosomal RNA small subunit methyltransferase C [Yersinia kristensenii ATCC 33638] gi|238700009|gb|EEP92752.1| Ribosomal RNA small subunit methyltransferase C [Yersinia kristensenii ATCC 33638] Length = 347 Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 24/87 (27%), Positives = 46/87 (52%), Gaps = 2/87 (2%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 ILD+G G G + L + P K D+S A+E +++ N + + + S+ +S Sbjct: 200 ILDVGCGAGVLASVLAPKMPKIKWTLSDVSAAAIESSRATLAANNIDAQ--VIASNVYSD 257 Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEV 187 ++G F++I+SNPP+ + + E+ Sbjct: 258 IKGRFEMIISNPPFHDGIQTSLTAAEL 284 >gi|209884397|ref|YP_002288255.1| ribosomal protein L11 methyltransferase [Oligotropha carboxidovorans OM5] gi|209872593|gb|ACI92389.1| ribosomal protein L11 methyltransferase [Oligotropha carboxidovorans OM5] Length = 283 Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 35/98 (35%), Positives = 50/98 (51%), Gaps = 16/98 (16%) Query: 80 LLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK--ESPFFKGVGVDISCKALEIA 137 LL+D L PR R+LDLGTGTG + +A K P DI +++ +A Sbjct: 131 LLLDRVLHRRAPR-------RVLDLGTGTGVLAIAAAKALRRPILAS---DIDPQSVLVA 180 Query: 138 KSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSN 171 NAV NGV + +T Q+ F S G FD++++N Sbjct: 181 HDNAVLNGVGQYVETFQAIGFGSPRFAQAGPFDLVLAN 218 >gi|116627670|ref|YP_820289.1| hypothetical protein STER_0852 [Streptococcus thermophilus LMD-9] gi|116100947|gb|ABJ66093.1| 16S rRNA m(2)G 1207 methyltransferase [Streptococcus thermophilus LMD-9] gi|312278193|gb|ADQ62850.1| Methyltransferase small domain protein [Streptococcus thermophilus ND03] Length = 196 Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 3/73 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LD+G G G + ++L K + +DI+ +A+++AK NA NGV QS+ + + Sbjct: 61 LLDVGCGYGPLGISLAKVQGV-QSTMIDINSRAIDLAKKNAERNGVVAHI--FQSNIYEN 117 Query: 161 VEGLFDVIVSNPP 173 V FD I+SNPP Sbjct: 118 VSEKFDYIISNPP 130 >gi|228470842|ref|ZP_04055689.1| methyltransferase small [Porphyromonas uenonis 60-3] gi|228307409|gb|EEK16419.1| methyltransferase small [Porphyromonas uenonis 60-3] Length = 238 Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 4/83 (4%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LD+GTGTG + L L + P +DI +A+ A+ N + S R L D + Sbjct: 34 QVLDVGTGTGILSLMLAQTYPSAMVTAIDIDDEAVRTAQDNFSRSPYSNRLTALSCDITA 93 Query: 160 SVEGL----FDVIVSNPPYIESV 178 L +D+IVSNPPY + + Sbjct: 94 PELALPLRHYDLIVSNPPYYDGL 116 >gi|313224250|emb|CBY20039.1| unnamed protein product [Oikopleura dioica] Length = 427 Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 42/154 (27%), Positives = 72/154 (46%), Gaps = 20/154 (12%) Query: 105 GTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL 164 G G A+ A E + + +DI + +E+AK NA GV +R + + D+F + L Sbjct: 233 GVGGNAIQFAFTCE----RVIAIDIDPEKIEMAKHNAAIYGVEDRIEFIVGDYFKIIPSL 288 Query: 165 -FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR-------TIADGVSRH 216 DV+ +PP+ +D +++D GG+DGL YR IA V R+ Sbjct: 289 RPDVVFLSPPWGGPAYLDQDIFDLKDM-------GGMDGLEIYRVAKERTDNIAYFVPRN 341 Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAF 250 + L + G +Q+V+V + + K + A+ Sbjct: 342 TDSAQLAWL-AGEDQQVEVEQNMLNYKTKTITAY 374 >gi|227522505|ref|ZP_03952554.1| methyltransferase [Lactobacillus hilgardii ATCC 8290] gi|227090327|gb|EEI25639.1| methyltransferase [Lactobacillus hilgardii ATCC 8290] Length = 202 Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 33/99 (33%), Positives = 52/99 (52%), Gaps = 3/99 (3%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ILD+GTG G + LA+ K P VD++ AL +A+ NA NG+S S+ +S Sbjct: 64 NILDMGTGYGPIGLAIAKIQPDRVVDMVDVNEIALALAEKNAKANGISN-VRIFASNSYS 122 Query: 160 SVEGLFDVIVSNPPYI--ESVIVDCLGLEVRDFDPRISL 196 +++ + IV+NPP + V+ D + V P +L Sbjct: 123 NIKDNYAAIVTNPPVRAGKKVVDDMITGAVSHLKPNATL 161 >gi|227510689|ref|ZP_03940738.1| methyltransferase [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227513705|ref|ZP_03943754.1| methyltransferase [Lactobacillus buchneri ATCC 11577] gi|227083024|gb|EEI18336.1| methyltransferase [Lactobacillus buchneri ATCC 11577] gi|227189810|gb|EEI69877.1| methyltransferase [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 202 Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 33/99 (33%), Positives = 52/99 (52%), Gaps = 3/99 (3%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ILD+GTG G + LA+ K P VD++ AL +A+ NA NG+S S+ +S Sbjct: 64 NILDMGTGYGPIGLAIAKIQPDRVVDMVDVNEIALALAEKNAQANGISN-VRIFASNSYS 122 Query: 160 SVEGLFDVIVSNPPYI--ESVIVDCLGLEVRDFDPRISL 196 +++ + IV+NPP + V+ D + V P +L Sbjct: 123 NIKDNYAAIVTNPPVRAGKKVVDDMITGAVSHLKPNATL 161 >gi|226294709|gb|EEH50129.1| hypothetical protein PADG_06208 [Paracoccidioides brasiliensis Pb18] Length = 474 Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 39/107 (36%), Positives = 50/107 (46%), Gaps = 15/107 (14%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETEL-------LVDSALAFSLPRIEKRDVVRILD 103 + ILG + F + + PRPETE L+ S F E +RILD Sbjct: 105 LQYILGDQPFGELEILCRRGVLIPRPETESYTTRTANLLLSKFKFKSESQEHPPALRILD 164 Query: 104 LGTGTGAVCLALLKES------PFFKGVGVDISCKALEIAKSNAVTN 144 L TGTG C+ LL S P + GVDIS +ALE+A+ N N Sbjct: 165 LCTGTG--CIPLLLHSLLAPAFPQLQICGVDISARALELARENLEHN 209 >gi|163749078|ref|ZP_02156328.1| hypothetical protein KT99_19594 [Shewanella benthica KT99] gi|161331148|gb|EDQ02037.1| hypothetical protein KT99_19594 [Shewanella benthica KT99] Length = 349 Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 30/86 (34%), Positives = 42/86 (48%), Gaps = 6/86 (6%) Query: 89 SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148 +LP+++ R +LD G G G + ALLKE P + VDI+ AL + N Sbjct: 200 NLPKMKGR----VLDFGCGAGVITAALLKEQPKLQIECVDINAMALASCELTLTANNFIA 255 Query: 149 RFDTLQSDWFSSVEGLFDVIVSNPPY 174 T SD + FD I+SNPP+ Sbjct: 256 --TTYPSDGLDQTQDKFDGIISNPPF 279 >gi|291521123|emb|CBK79416.1| Predicted O-methyltransferase [Coprococcus catus GD/7] Length = 244 Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 10/101 (9%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+LDLGTGTG + + + ++ G++I ++ ++A + NG+ ++ D + D Sbjct: 47 RVLDLGTGTGIIPILMAAKTDGEHFTGLEIQEESADMAARSVACNGLQQKIDIVNGD-IK 105 Query: 160 SVEGL-----FDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195 G+ FDV+ +NPPY + D GL+ D I+ Sbjct: 106 EASGIFGAASFDVVTTNPPY----MTDTHGLKNPDMPKAIA 142 >gi|239623106|ref|ZP_04666137.1| methyltransferase type 11 [Clostridiales bacterium 1_7_47_FAA] gi|239522473|gb|EEQ62339.1| methyltransferase type 11 [Clostridiales bacterium 1_7_47FAA] Length = 253 Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 25/80 (31%), Positives = 45/80 (56%), Gaps = 4/80 (5%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+LDLGTGTG + + L ++ G++I ++ ++A+ + N + E+ D + D Sbjct: 56 RMLDLGTGTGIIPILLTAKTEGEHFTGLEIQEESADMARRSVRYNHLEEKVDIVTGDIVE 115 Query: 160 SVE----GLFDVIVSNPPYI 175 + + FDV+ SNPPY+ Sbjct: 116 ASQLFALASFDVVTSNPPYM 135 >gi|170078614|ref|YP_001735252.1| hypothetical protein SYNPCC7002_A2010 [Synechococcus sp. PCC 7002] gi|164599156|gb|AAC14722.2| CpcM [Synechococcus sp. PCC 7002] gi|169886283|gb|ACA99996.1| conserved hypothetical protein [Synechococcus sp. PCC 7002] Length = 399 Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 32/91 (35%), Positives = 47/91 (51%), Gaps = 6/91 (6%) Query: 84 SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143 +A F R D +RILD G GTG L+ +P + VG+D+S ALE+A+ Sbjct: 41 AAYNFCTGRKPSTDNIRILDAGCGTGVGTEYLIHLNPAAEIVGIDLSEGALEVAEKRCQQ 100 Query: 144 NGVSER------FDTLQSDWFSSVEGLFDVI 168 +GV +R F L + + +EG FD+I Sbjct: 101 SGVRDRHTAPVTFKRLPIEQATELEGEFDLI 131 >gi|323357971|ref|YP_004224367.1| methylase of polypeptide chain release factors [Microbacterium testaceum StLB037] gi|323274342|dbj|BAJ74487.1| methylase of polypeptide chain release factors [Microbacterium testaceum StLB037] Length = 504 Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 44/153 (28%), Positives = 71/153 (46%), Gaps = 12/153 (7%) Query: 74 PRPETELLVDSALAFSLPRIE-KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCK 132 P PE +L + +L R++ LD+GTG G L L + P + V DIS + Sbjct: 135 PLPEDHVLGVGGASQTLARLQLTWRAASALDIGTGCGIQALRLRRLVP--RVVATDISER 192 Query: 133 ALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFD 191 AL + NA+ N V + +T F V G F+ + SNPP++ + G+ ++ Sbjct: 193 ALRFTRLNALLNDV-DGIETRHGSLFDPVAGETFERVASNPPFV--ITPRVAGVPAYEYR 249 Query: 192 PRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224 DGG++G + ++ GV HL G+ Sbjct: 250 -----DGGLEGDALVASVIRGVGAHLAPGGVAQ 277 >gi|172035902|ref|YP_001802403.1| hypothetical protein cce_0986 [Cyanothece sp. ATCC 51142] gi|171697356|gb|ACB50337.1| unknown [Cyanothece sp. ATCC 51142] Length = 401 Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 34/91 (37%), Positives = 46/91 (50%), Gaps = 6/91 (6%) Query: 84 SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143 +A F R + +RILD G GTG L+ +P + VGVDIS KALEIA+ Sbjct: 41 AAYNFCTGRKPATENIRILDAGCGTGVGTEYLILLNPHAEIVGVDISEKALEIAQKRIQQ 100 Query: 144 NGVSER------FDTLQSDWFSSVEGLFDVI 168 +GV+ F L + +EG FD+I Sbjct: 101 SGVAANHNHPISFHHLPLEEADKIEGEFDLI 131 >gi|323490605|ref|ZP_08095810.1| hypothetical protein GPDM_14642 [Planococcus donghaensis MPA1U2] gi|323395697|gb|EGA88538.1| hypothetical protein GPDM_14642 [Planococcus donghaensis MPA1U2] Length = 200 Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 28/74 (37%), Positives = 45/74 (60%), Gaps = 2/74 (2%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LD+G G G + + + K SP + VD++ +A+E+AK+NA N +S +SD S+ Sbjct: 62 VLDVGCGYGPIGMTVAKISPQKQVHMVDVNTRAIELAKTNAEKNDIS-NVRIYESDGLST 120 Query: 161 VEGL-FDVIVSNPP 173 VE F I++NPP Sbjct: 121 VEASGFSAILTNPP 134 >gi|158520560|ref|YP_001528430.1| methyltransferase small [Desulfococcus oleovorans Hxd3] gi|158509386|gb|ABW66353.1| methyltransferase small [Desulfococcus oleovorans Hxd3] Length = 241 Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 4/79 (5%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 RI+DLGTG G + L L P G++I + +IA NA N +++R + +D + Sbjct: 44 RIVDLGTGCGIIPLILACRHPSVSITGIEIQPQLAQIATENAAANQMTDRVSIVCADIRN 103 Query: 160 SVE----GLFDVIVSNPPY 174 + + G D++V NPP+ Sbjct: 104 ANDHLPAGKADIVVCNPPF 122 >gi|17229505|ref|NP_486053.1| hypothetical protein all2013 [Nostoc sp. PCC 7120] gi|17131103|dbj|BAB73712.1| all2013 [Nostoc sp. PCC 7120] Length = 239 Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 30/80 (37%), Positives = 45/80 (56%), Gaps = 8/80 (10%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS---D 156 RILDLG GTG + L +L+ P + + +D S + L+ A++ V +G ER+ LQ+ D Sbjct: 44 RILDLGCGTGELSLKILQRCPDAQVIALDYSPRMLKFAQNKIVASGYKERWTGLQADFGD 103 Query: 157 WFSSVEGL-----FDVIVSN 171 W + E L FD VS+ Sbjct: 104 WAINPETLNIGNEFDACVSS 123 >gi|148265792|ref|YP_001232498.1| methyltransferase small [Geobacter uraniireducens Rf4] gi|146399292|gb|ABQ27925.1| methyltransferase small [Geobacter uraniireducens Rf4] Length = 256 Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 6/80 (7%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R +DLG+G G + L L +E+ GV+ ++A N NG+ +R L +D + Sbjct: 44 RAIDLGSGCGIIPLILAREAEDVTVTGVEFQALLADLALRNVSINGLGDRISILAAD-IT 102 Query: 160 SVEGL-----FDVIVSNPPY 174 S++G+ FD++VSNPPY Sbjct: 103 SLKGVFPVSSFDLVVSNPPY 122 >gi|78224072|ref|YP_385819.1| putative RNA methylase:methyltransferase small [Geobacter metallireducens GS-15] gi|78195327|gb|ABB33094.1| putative RNA methylase:Methyltransferase small [Geobacter metallireducens GS-15] Length = 255 Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 8/92 (8%) Query: 87 AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146 AF+ P++ R++DLGTG+ + L L + + VGV++ +A+ N NG+ Sbjct: 35 AFAAPQVG----ARVIDLGTGSAVIPLVLARRTVQATFVGVELQEGLATLAERNVALNGL 90 Query: 147 SERFDTLQSDWFSSVEGL----FDVIVSNPPY 174 +R L D + FDV+VSNPPY Sbjct: 91 VDRISILCDDVLGLRKRFPVSSFDVVVSNPPY 122 >gi|219852672|ref|YP_002467104.1| methyltransferase small [Methanosphaerula palustris E1-9c] gi|219546931|gb|ACL17381.1| methyltransferase small [Methanosphaerula palustris E1-9c] Length = 204 Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 29/76 (38%), Positives = 45/76 (59%), Gaps = 4/76 (5%) Query: 101 ILDLGTGTGAV-CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ-SDWF 158 ILDLG GTG + C A + + G+DI +A+++A++NA G+S F T SD Sbjct: 51 ILDLGCGTGVLTCGAAMMGA--VSVTGIDIDARAIQVAEANARRCGISATFITGDVSDQT 108 Query: 159 SSVEGLFDVIVSNPPY 174 ++G FD ++ NPP+ Sbjct: 109 LPLDGPFDTVIMNPPF 124 >gi|50311715|ref|XP_455885.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|49645021|emb|CAG98593.1| KLLA0F17952p [Kluyveromyces lactis] Length = 222 Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 43/144 (29%), Positives = 74/144 (51%), Gaps = 9/144 (6%) Query: 102 LDLGTGTGAVCLALLKES-PFFKGV--GVDISCKALEIAKSNAVTNGV-SERFDTLQSDW 157 +++G+G+G V L++ P G+ D++ AL+ NG + FD LQ+D Sbjct: 47 IEIGSGSGIVSTFLMQNGIPNANGLYLATDLNPWALDATLDTCSKNGCKNSHFDVLQTDL 106 Query: 158 FSSV-EGLFDVIVSNPPYIESVIVDCL---GLEVRDFDPR-ISLDGGIDGLSHYRTIADG 212 SS+ E D++V NPPY+ + V L VRD + ++LDGG DG+ + + +G Sbjct: 107 TSSIRENEVDLLVFNPPYVPAETVPELPHSNHAVRDDEWLFLALDGGDDGMVVTQRLLNG 166 Query: 213 VSRHLNKDGLCSVEIGYNQKVDVV 236 + R L+ +G+ + K + V Sbjct: 167 LDRILSCNGVAYILFCARNKPETV 190 >gi|329936375|ref|ZP_08286140.1| methyltransferase [Streptomyces griseoaurantiacus M045] gi|329304171|gb|EGG48052.1| methyltransferase [Streptomyces griseoaurantiacus M045] Length = 220 Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 28/78 (35%), Positives = 47/78 (60%), Gaps = 5/78 (6%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LD+GTG+G LAL+ + VD+S +A+ A+ NA G+ R L+ + F+ Sbjct: 34 VLDVGTGSG--ALALVAARRGARVTAVDVSRRAVYAARLNAWRAGL--RIRALRGNLFTP 89 Query: 161 VEG-LFDVIVSNPPYIES 177 V G FD++++NPPY+ + Sbjct: 90 VAGETFDLVLANPPYVPT 107 >gi|299144168|ref|ZP_07037248.1| ribosomal protein L11 methyltransferase [Peptoniphilus sp. oral taxon 386 str. F0131] gi|298518653|gb|EFI42392.1| ribosomal protein L11 methyltransferase [Peptoniphilus sp. oral taxon 386 str. F0131] Length = 314 Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 39/148 (26%), Positives = 69/148 (46%), Gaps = 24/148 (16%) Query: 57 WRDFYN-------VRLTLSSDTFEPRPETELLVDSALAF-------------SLPRIEKR 96 W+ +Y+ + + + + +E + + +D +AF +L K+ Sbjct: 115 WKKYYHPIEIGEKILIKPTWEEYENKDRIVIDIDPGMAFGTGTHETTYMCIEALEEYVKQ 174 Query: 97 DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 D + + D+G G+G + +A +K K + VDI K +E + NA N VSE+ + + Sbjct: 175 DNI-VFDIGCGSGILGIAAIKLGAE-KVIAVDIDQKCIEASLENANMNNVSEKIKVYKGN 232 Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLG 184 V G D+IVSN I +IVD +G Sbjct: 233 LLDVVSGNADIIVSN--IIAEIIVDMIG 258 >gi|302526687|ref|ZP_07279029.1| predicted protein [Streptomyces sp. AA4] gi|302435582|gb|EFL07398.1| predicted protein [Streptomyces sp. AA4] Length = 227 Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 31/80 (38%), Positives = 44/80 (55%), Gaps = 5/80 (6%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 +R DLGTG+GA+ +AL + V DIS +AL A N V + L+ Sbjct: 47 MRCADLGTGSGALAIALARTGATV--VAADISMRALASAWMNTVLRALP--IGLLRGGLR 102 Query: 159 SSVE-GLFDVIVSNPPYIES 177 +VE G +DV+V+NPPY+ S Sbjct: 103 ETVEAGPYDVVVANPPYVPS 122 >gi|326780899|ref|ZP_08240164.1| methylase [Streptomyces cf. griseus XylebKG-1] gi|326661232|gb|EGE46078.1| methylase [Streptomyces cf. griseus XylebKG-1] Length = 252 Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 48/149 (32%), Positives = 68/149 (45%), Gaps = 13/149 (8%) Query: 75 RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134 RP+T+ L+ LA ++ R +LDL TG+GA LAL + VDIS +A+ Sbjct: 47 RPQTDTLL---LALAMRREGIGPGTDLLDLCTGSGA--LALHAARLGARVTAVDISRRAV 101 Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPR 193 A+ N + + D ++ G FD +VSNPPY+ + GL + + P Sbjct: 102 ASARLNTALARLP--VTVRRGDLLRALPGHTFDAVVSNPPYVPAP-----GLSLPRYGPG 154 Query: 194 ISLDGGIDGLSHYRTIADGVSRHLNKDGL 222 S D G DG I D S L GL Sbjct: 155 RSWDAGPDGRVILDRICDDASAALRPGGL 183 >gi|24379557|ref|NP_721512.1| hypothetical protein SMU.1125c [Streptococcus mutans UA159] gi|24377502|gb|AAN58818.1|AE014950_1 conserved hypothetical protein [Streptococcus mutans UA159] Length = 198 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 30/73 (41%), Positives = 43/73 (58%), Gaps = 3/73 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LDLG G G + +AL K + VDI+ +AL++ + NA N VS + QSD + + Sbjct: 61 LLDLGCGYGPLGIALAKVQKLDVTM-VDINNRALDLTRQNAENNEVSA--NIFQSDIYEN 117 Query: 161 VEGLFDVIVSNPP 173 V FD I+SNPP Sbjct: 118 VFDSFDYIISNPP 130 >gi|169351743|ref|ZP_02868681.1| hypothetical protein CLOSPI_02524 [Clostridium spiroforme DSM 1552] gi|169291965|gb|EDS74098.1| hypothetical protein CLOSPI_02524 [Clostridium spiroforme DSM 1552] Length = 197 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 26/73 (35%), Positives = 42/73 (57%), Gaps = 2/73 (2%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LD+G G G +AL PF + +DI+ +AL +A+ N N V+ + S+ + Sbjct: 61 LLDVGCGYGTFGIALKSVYPFLEIDMIDINDRALNLARENLKLNNVNA--NVYLSNTYEK 118 Query: 161 VEGLFDVIVSNPP 173 VE +D+IV+NPP Sbjct: 119 VENKYDLIVTNPP 131 >gi|328951766|ref|YP_004369100.1| Methyltransferase type 11 [Desulfobacca acetoxidans DSM 11109] gi|328452090|gb|AEB07919.1| Methyltransferase type 11 [Desulfobacca acetoxidans DSM 11109] Length = 262 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 4/83 (4%) Query: 96 RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155 R+ +++DLG G G + L L P VGV++ +A N NG R + +QS Sbjct: 47 REPEKVVDLGAGCGILALLLACRFPNSSFVGVELQPSLAALAVRNVRLNGFEGRIEIVQS 106 Query: 156 DWFSSVE----GLFDVIVSNPPY 174 D S ++ F+V+VSNPPY Sbjct: 107 DMQSLLQLYPPSSFEVVVSNPPY 129 >gi|313245968|emb|CBY34942.1| unnamed protein product [Oikopleura dioica] Length = 394 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 42/154 (27%), Positives = 72/154 (46%), Gaps = 20/154 (12%) Query: 105 GTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL 164 G G A+ A E + + +DI + +E+AK NA GV +R + + D+F + L Sbjct: 200 GVGGNAIQFAFTCE----RVIAIDIDPEKIEMAKHNAAIYGVEDRIEFIVGDYFKIIPSL 255 Query: 165 -FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR-------TIADGVSRH 216 DV+ +PP+ +D +++D GG+DGL YR IA V R+ Sbjct: 256 RPDVVFLSPPWGGPAYLDQDIFDLKDM-------GGMDGLEIYRVAKERTDNIAYFVPRN 308 Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAF 250 + L + G +Q+V+V + + K + A+ Sbjct: 309 TDSAQLAWL-AGEDQQVEVEQNMLNYKTKTITAY 341 >gi|182440236|ref|YP_001827955.1| putative methyltransferase [Streptomyces griseus subsp. griseus NBRC 13350] gi|178468752|dbj|BAG23272.1| putative methyltransferase [Streptomyces griseus subsp. griseus NBRC 13350] Length = 252 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 48/149 (32%), Positives = 68/149 (45%), Gaps = 13/149 (8%) Query: 75 RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134 RP+T+ L+ LA ++ R +LDL TG+GA LAL + VDIS +A+ Sbjct: 47 RPQTDTLL---LALAMRREGIGPGTDLLDLCTGSGA--LALHAARLGARVTAVDISRRAV 101 Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPR 193 A+ N + + D ++ G FD +VSNPPY+ + GL + + P Sbjct: 102 ASARLNTALARLP--VTVRRGDLLRALPGHTFDAVVSNPPYVPAP-----GLSLPRYGPG 154 Query: 194 ISLDGGIDGLSHYRTIADGVSRHLNKDGL 222 S D G DG I D S L GL Sbjct: 155 RSWDAGPDGRVILDRICDDASAALRPGGL 183 >gi|240172926|ref|ZP_04751585.1| methylase, putative [Mycobacterium kansasii ATCC 12478] Length = 223 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 49/164 (29%), Positives = 73/164 (44%), Gaps = 17/164 (10%) Query: 72 FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131 ++P+ ++ LLVD+ L I +R R+LDL TG+G V +A E DI Sbjct: 11 YQPQFDSRLLVDTMRRTGL--IPRR---RVLDLCTGSGFVAIAA-AEMGCASVTAFDICP 64 Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDF 190 A+ ++ N GV D Q W + + F+VIVSNPPY+ + VD Sbjct: 65 HAVRCSRDNVADAGVD--VDVRQGSWTRAFDCAPFEVIVSNPPYVPAPPVDDSDAISPAA 122 Query: 191 DPRISLDGGIDG--------LSHYRTIADGVSRHLNKDGLCSVE 226 P + + G DG S + + DG S L + L V+ Sbjct: 123 GPSWAWNAGPDGRLVLDPLCKSAAKLLCDGGSLLLVQSALAGVQ 166 >gi|254489352|ref|ZP_05102555.1| Methyltransferase small domain superfamily protein [Roseobacter sp. GAI101] gi|214041859|gb|EEB82499.1| Methyltransferase small domain superfamily protein [Roseobacter sp. GAI101] Length = 229 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 27/78 (34%), Positives = 43/78 (55%), Gaps = 3/78 (3%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LD+G GTG V + F+ VDI+ A+ +AK+NA+ N ++R L+ D F+ Sbjct: 70 MLDMGCGTGIVGAFAARNG--FRVTSVDINPDAVRVAKANALLNDQTDRITVLEGDLFAP 127 Query: 161 VEGL-FDVIVSNPPYIES 177 V FD++ PPY + Sbjct: 128 VTSQSFDLVCFGPPYFKG 145 >gi|261409530|ref|YP_003245771.1| methyltransferase small [Paenibacillus sp. Y412MC10] gi|261285993|gb|ACX67964.1| methyltransferase small [Paenibacillus sp. Y412MC10] Length = 201 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 27/76 (35%), Positives = 45/76 (59%), Gaps = 2/76 (2%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 ++LD+G G G + L + + +DI+ +A+E+AK NA NG+ L+SD F Sbjct: 60 AQVLDVGCGYGPIGLTAARMASQGHVTMIDINSRAVELAKENAKRNGII-NVTILESDLF 118 Query: 159 SSVE-GLFDVIVSNPP 173 +V+ FDV+++NPP Sbjct: 119 EAVKDQQFDVVLTNPP 134 >gi|167622638|ref|YP_001672932.1| rRNA (guanine-N(2)-)-methyltransferase [Shewanella halifaxensis HAW-EB4] gi|226712991|sp|B0TSU8|RSMC_SHEHH RecName: Full=Ribosomal RNA small subunit methyltransferase C; AltName: Full=16S rRNA m2G1207 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rsmC gi|167352660|gb|ABZ75273.1| rRNA (guanine-N(2)-)-methyltransferase [Shewanella halifaxensis HAW-EB4] Length = 341 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 31/97 (31%), Positives = 48/97 (49%), Gaps = 11/97 (11%) Query: 78 TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137 T+LL+++ LP++ + +LD G G G + ALLK P VDI+ AL Sbjct: 191 TKLLLEN-----LPKMRGK----VLDFGCGAGVIAAALLKAQPELTLECVDINAMALASC 241 Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174 + NG + + SD + G +D I+SNPP+ Sbjct: 242 EFTLQANGFNAKI--FASDGLAQAAGRYDGIISNPPF 276 >gi|146312703|ref|YP_001177777.1| methyltransferase small [Enterobacter sp. 638] gi|262828272|sp|A4WDE6|TRMN6_ENT38 RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName: Full=tRNA m6A37 methyltransferase gi|145319579|gb|ABP61726.1| methyltransferase small [Enterobacter sp. 638] Length = 245 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 31/89 (34%), Positives = 46/89 (51%), Gaps = 5/89 (5%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 V RILD+G+G+G + L L + + + V++ +A A NA + +ER +D Sbjct: 45 VKRILDIGSGSGLLALMLAQRTEQHVTIDSVELDAQAANQASENAAESPWAERVQVQCAD 104 Query: 157 ---WFSSVEGLFDVIVSNPPYIESVIVDC 182 W +D+IVSNPPY E VDC Sbjct: 105 ILAWAPEQTARYDLIVSNPPYYEPG-VDC 132 >gi|317060713|ref|ZP_07925198.1| methyltransferase [Fusobacterium sp. D12] gi|313686389|gb|EFS23224.1| methyltransferase [Fusobacterium sp. D12] Length = 242 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 37/102 (36%), Positives = 53/102 (51%), Gaps = 12/102 (11%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL-LKESPFFKGVGVDISCKALEIAKSN 140 +DS L +I KR ILDLGTG A+ L L LK + + G++I + E+A N Sbjct: 19 LDSLLISEFIKINKRSKT-ILDLGTGNAAIPLFLSLKTTA--QIYGLEIQQISYELAIKN 75 Query: 141 AVTNGVSERFDTLQSD------WFSSVEGLFDVIVSNPPYIE 176 N + E+ L D +FS + FD++VSNPP+ E Sbjct: 76 IALNHLEEQVHILHGDMKNWECFFS--KNSFDIVVSNPPFFE 115 >gi|238927560|ref|ZP_04659320.1| methyltransferase [Selenomonas flueggei ATCC 43531] gi|238884485|gb|EEQ48123.1| methyltransferase [Selenomonas flueggei ATCC 43531] Length = 245 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 33/99 (33%), Positives = 52/99 (52%), Gaps = 12/99 (12%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 +D+ L P + R+ V LDLGTGTG + L + + V +D +A E+A NA Sbjct: 32 MDAVLLAHFPTLTGRECV--LDLGTGTGIIPLLIADRTAAVTAVELD-PVQA-ELAVRNA 87 Query: 142 VTNGVSERFDTLQSDW------FSSVEGLFDVIVSNPPY 174 NG++E+ + D+ FS G +D++ +NPPY Sbjct: 88 ALNGLTEKITVREGDYRDPSALFSC--GAYDLVFANPPY 124 >gi|296108844|ref|YP_003615793.1| protein of unknown function DUF890 [Methanocaldococcus infernus ME] gi|295433658|gb|ADG12829.1| protein of unknown function DUF890 [Methanocaldococcus infernus ME] Length = 262 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 33/125 (26%), Positives = 61/125 (48%), Gaps = 9/125 (7%) Query: 57 WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116 + +N+ + P P + L ++ L RI+ +D ++L++GTG+G +ALL Sbjct: 45 LKHLFNLDMDFHESALVPTPISRYLFLDSVTKELKRIKNKDKFKMLEIGTGSG--IIALL 102 Query: 117 KESPF-FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS-----DWFSSVEG-LFDVIV 169 F + V ++ L++A+ N + N +SE + S +EG FD+I+ Sbjct: 103 AAKIFNYNVVATEVIEDYLKLAEQNILKNSLSENIRLINSRGKIIRGIHELEGEKFDIIL 162 Query: 170 SNPPY 174 S PP+ Sbjct: 163 SYPPF 167 >gi|146307328|ref|YP_001187793.1| methyltransferase small [Pseudomonas mendocina ymp] gi|145575529|gb|ABP85061.1| methyltransferase small [Pseudomonas mendocina ymp] Length = 322 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 1/76 (1%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 RI D+G G G + + P + + +DI+ +AL + NA G+ + +SD Sbjct: 140 RIADIGCGAGPGAITAAQLRPGAQVLALDINERALAMTAVNARLAGIFN-LEVSKSDLLR 198 Query: 160 SVEGLFDVIVSNPPYI 175 V+G FD+I++NPPY+ Sbjct: 199 DVDGYFDLIIANPPYM 214 >gi|257463117|ref|ZP_05627518.1| methyltransferase [Fusobacterium sp. D12] Length = 250 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 37/102 (36%), Positives = 53/102 (51%), Gaps = 12/102 (11%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL-LKESPFFKGVGVDISCKALEIAKSN 140 +DS L +I KR ILDLGTG A+ L L LK + + G++I + E+A N Sbjct: 27 LDSLLISEFIKINKRSKT-ILDLGTGNAAIPLFLSLKTTA--QIYGLEIQQISYELAIKN 83 Query: 141 AVTNGVSERFDTLQSD------WFSSVEGLFDVIVSNPPYIE 176 N + E+ L D +FS + FD++VSNPP+ E Sbjct: 84 IALNHLEEQVHILHGDMKNWECFFS--KNSFDIVVSNPPFFE 123 >gi|170023426|ref|YP_001719931.1| methyltransferase small [Yersinia pseudotuberculosis YPIII] gi|262828924|sp|B1JRB8|TRMN6_YERPY RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName: Full=tRNA m6A37 methyltransferase gi|169749960|gb|ACA67478.1| methyltransferase small [Yersinia pseudotuberculosis YPIII] Length = 252 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 13/151 (8%) Query: 100 RILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 R+LD+G G+G + L + + S P + GV++ A + A SN + +ER Q D Sbjct: 54 RVLDIGCGSGLIALMIAQRSLPQVQIDGVELEPAAAQQASSNVELSPWAERIHIHQQDIH 113 Query: 159 SSVEG---LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215 E +D+IVSNPPY I C E RD G + T+ + + Sbjct: 114 QFAENHPHQYDLIVSNPPYFAPAIA-CRD-EARD-------TARYTGSLTHDTLLNCAEK 164 Query: 216 HLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246 + +DG+ V + + ++ R+ + F+ Sbjct: 165 LITEDGMFCVVLPHELGIEFARLAGQQGWFV 195 >gi|66357544|ref|XP_625950.1| Ydr140wp-like HemK family methylase. archaeal-like. RNA methylase [Cryptosporidium parvum Iowa II] gi|46226790|gb|EAK87756.1| Ydr140wp-like HemK family methylase. archaeal-like. RNA methylase [Cryptosporidium parvum Iowa II] Length = 254 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 45/191 (23%), Positives = 88/191 (46%), Gaps = 20/191 (10%) Query: 70 DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK-----ESPFFKG 124 + +EP E L++ AL I K I ++G G+G + LLK ++ F Sbjct: 14 NVYEPS-EDSFLMEDALILEKNEILKAKPRLICEIGCGSGYLTACLLKIIKESDAEFSLP 72 Query: 125 VG--VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVI 179 + VD++ KALE+++ N ++ + ++ F+ + GLF++I+ NPPY+ S Sbjct: 73 ISYLVDVNTKALEMSEKVISNNKINSPIELIKMSLFTCLNRNRGLFEIIIFNPPYVPSSN 132 Query: 180 VDCLGLEVRDFDPRISLDGGIDGL---SHY-----RTIADGVSRHLNKDGLCSVEIGYNQ 231 + L + + + GG++GL S++ R I S ++ + +E +N Sbjct: 133 KE-LNQSILNCGIDSAWSGGVNGLFFVSYFLFGDNRLILSETSHQFQEEEIIRIEDQFNS 191 Query: 232 KVDVVRIFESR 242 +V + + Sbjct: 192 FPSLVDVLAPK 202 >gi|218245562|ref|YP_002370933.1| type 12 methyltransferase [Cyanothece sp. PCC 8801] gi|218166040|gb|ACK64777.1| Methyltransferase type 12 [Cyanothece sp. PCC 8801] Length = 400 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 32/91 (35%), Positives = 48/91 (52%), Gaps = 6/91 (6%) Query: 84 SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143 +A F R R +RILD G GTG L+ +P + VG+D+S KALEIA+ + Sbjct: 41 AAYNFCTGRKPPRQNIRILDAGCGTGVGTEYLIMLNPDAEIVGIDLSEKALEIAEERSQK 100 Query: 144 NGVSER------FDTLQSDWFSSVEGLFDVI 168 +GV+ + F L + + + G FD+I Sbjct: 101 SGVASQHNAPISFQHLNLENAAQLPGQFDLI 131 >gi|313895855|ref|ZP_07829409.1| methyltransferase small domain protein [Selenomonas sp. oral taxon 137 str. F0430] gi|312975280|gb|EFR40741.1| methyltransferase small domain protein [Selenomonas sp. oral taxon 137 str. F0430] Length = 241 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 32/101 (31%), Positives = 52/101 (51%), Gaps = 16/101 (15%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 +D+ L PR+ R+ R+LDLGTG G + L ++ E + + V+++ +A NA Sbjct: 27 MDAVLLAHFPRLTGRE--RVLDLGTGAGVIPLLIVDE--VREILAVELNSAQAALAVRNA 82 Query: 142 VTNGVSERFDTLQSDW--------FSSVEGLFDVIVSNPPY 174 NGVS + + D+ F S FD++ +NPPY Sbjct: 83 ALNGVSGKITVREGDYRDPPALFVFES----FDLVFANPPY 119 >gi|312194811|ref|YP_004014872.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Frankia sp. EuI1c] gi|311226147|gb|ADP79002.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Frankia sp. EuI1c] Length = 324 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 51/192 (26%), Positives = 74/192 (38%), Gaps = 32/192 (16%) Query: 26 PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85 P VLD RF+ + + R + + G F ++ L + F PRPETE +V A Sbjct: 66 PADVLD---RFW--DLVGRRAGRAPLQHLTGEAYFRHLTLAVGPGVFVPRPETEAVVGWA 120 Query: 86 L------AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKS 139 + A S+P +R +DL G+GA+ LAL E + V+ AL + Sbjct: 121 IDTLAAEASSMP--AERPGPVCVDLCAGSGAIALALADEVAGAEVHAVEADPAALTYLRR 178 Query: 140 NAVTNGVSERFDTLQS-------------------DWFSSVEGLFDVIVSNPPYIESVIV 180 N G R D + + G D +VSNPPY+ Sbjct: 179 NVAATGPPVRVHAADVLGIPTGYGPVGAWAQVPVLDGLAGLVGRVDAVVSNPPYLPDADR 238 Query: 181 DCLGLEVRDFDP 192 + EV DP Sbjct: 239 AVVEPEVGRHDP 250 >gi|269955150|ref|YP_003324939.1| methyltransferase small [Xylanimonas cellulosilytica DSM 15894] gi|269303831|gb|ACZ29381.1| methyltransferase small [Xylanimonas cellulosilytica DSM 15894] Length = 572 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 46/132 (34%), Positives = 62/132 (46%), Gaps = 11/132 (8%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN-GVSERFDTLQSDWF 158 R+LDLGTG G L + + VG DIS +AL A+ NA N G ++ FD + Sbjct: 220 RVLDLGTGCGIQALHAHRHAAAV--VGTDISARALAFARFNAGLNLGDADAFDLRRGSML 277 Query: 159 SSVEG-LFDVIVSNPPYIESVIVDCLGLEVR----DFDPRISLDGGIDGLSHYRTIADGV 213 V G FD++VSNPP++ + G V DF+ R DGG G R + GV Sbjct: 278 EPVAGEQFDLVVSNPPFVITPHSGAAGRAVHDALGDFEYR---DGGRAGDDLVRDLIQGV 334 Query: 214 SRHLNKDGLCSV 225 L G + Sbjct: 335 GAVLAPGGTAQL 346 >gi|85813537|emb|CAF33043.1| putative oxidase > apramycin biosynthesisN-methyltransferase [Streptoalloteichus tenebrarius] Length = 262 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 32/76 (42%), Positives = 45/76 (59%), Gaps = 5/76 (6%) Query: 99 VRILDLGTGTGA-VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 VR +++G G GA VC L+ + F VG D+ +ALE+A NA +G R T SD Sbjct: 93 VRAVEIGCGAGAAVCTMALELAGEF--VGTDVDPEALELAAENARRHGAPVRLVT--SDL 148 Query: 158 FSSVEGLFDVIVSNPP 173 F +++G FDVI +N P Sbjct: 149 FDALDGRFDVIYANLP 164 >gi|330006958|ref|ZP_08305819.1| ribosomal RNA small subunit methyltransferase [Klebsiella sp. MS 92-3] gi|328535616|gb|EGF62069.1| ribosomal RNA small subunit methyltransferase [Klebsiella sp. MS 92-3] Length = 347 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 39/132 (29%), Positives = 58/132 (43%), Gaps = 23/132 (17%) Query: 90 LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 L +E ++LD+G G G + AL SP + D+S A+E +++ NG++ Sbjct: 194 LSTLEPHTKGKVLDVGCGAGVLAAALASHSPKVRLTLCDVSAPAVEASRATLAANGLAG- 252 Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209 D S+ FS V G FD+I+SNPP+ DG L + + Sbjct: 253 -DVFASNVFSEVNGRFDMIISNPPF---------------------HDGLQTSLEAAQAL 290 Query: 210 ADGVSRHLNKDG 221 G RHLN G Sbjct: 291 IRGAVRHLNSGG 302 >gi|290580442|ref|YP_003484834.1| hypothetical protein SmuNN2025_0916 [Streptococcus mutans NN2025] gi|254997341|dbj|BAH87942.1| hypothetical protein [Streptococcus mutans NN2025] Length = 198 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 30/73 (41%), Positives = 43/73 (58%), Gaps = 3/73 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LDLG G G + +AL K + VDI+ +AL++ + NA N VS + QSD + + Sbjct: 61 LLDLGCGYGPLGIALAKVQKLDVTM-VDINNRALDLTRQNAENNEVSA--NIFQSDIYEN 117 Query: 161 VEGLFDVIVSNPP 173 V FD I+SNPP Sbjct: 118 VFDSFDYIISNPP 130 >gi|154506312|ref|ZP_02043050.1| hypothetical protein RUMGNA_03860 [Ruminococcus gnavus ATCC 29149] gi|153793401|gb|EDN75821.1| hypothetical protein RUMGNA_03860 [Ruminococcus gnavus ATCC 29149] Length = 232 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 25/80 (31%), Positives = 47/80 (58%), Gaps = 4/80 (5%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LDLGTGTG + + L ++ +G++I ++ ++A+ + N + E+ + +Q D Sbjct: 48 KVLDLGTGTGILPILLSAKTRGEHFIGLEIQKESADMARRSIEWNHLQEKIEIVQGDIKE 107 Query: 160 SV----EGLFDVIVSNPPYI 175 + FDVIV+NPPY+ Sbjct: 108 AAALFKPTFFDVIVTNPPYM 127 >gi|315656848|ref|ZP_07909735.1| 16S rRNA methyltransferase [Mobiluncus curtisii subsp. holmesii ATCC 35242] gi|315492803|gb|EFU82407.1| 16S rRNA methyltransferase [Mobiluncus curtisii subsp. holmesii ATCC 35242] Length = 213 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 1/74 (1%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 ++D+G G G + L L E P + VD++ +ALE+ ++NA NG+ ++D F++ Sbjct: 73 LVDVGCGWGPLALTLAAERPSAQVYAVDVNARALELTRANATANGLHNIQVLSEADAFAA 132 Query: 161 V-EGLFDVIVSNPP 173 + DVI SNPP Sbjct: 133 LGPNSVDVIWSNPP 146 >gi|261367267|ref|ZP_05980150.1| ribosomal protein L11 methyltransferase [Subdoligranulum variabile DSM 15176] gi|282570869|gb|EFB76404.1| ribosomal protein L11 methyltransferase [Subdoligranulum variabile DSM 15176] Length = 306 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 27/73 (36%), Positives = 42/73 (57%), Gaps = 3/73 (4%) Query: 100 RILDLGTGTGAVCLALLK-ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 R+LD+GTG+G + +A LK + +GV +D C + A NA NGV++RF L D Sbjct: 170 RVLDIGTGSGILAIAALKLGAKVAEGVDIDPMC--VRTAGENAERNGVADRFTVLVGDLS 227 Query: 159 SSVEGLFDVIVSN 171 G +++I +N Sbjct: 228 DKASGQYNIITAN 240 >gi|167519989|ref|XP_001744334.1| hypothetical protein [Monosiga brevicollis MX1] gi|163777420|gb|EDQ91037.1| predicted protein [Monosiga brevicollis MX1] Length = 343 Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust. Identities = 42/132 (31%), Positives = 64/132 (48%), Gaps = 10/132 (7%) Query: 76 PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135 P + LVD ALA SL + + I+D+G GTGA+ LALL P + V+ A Sbjct: 140 PPRQWLVDLALA-SL----ESNTRHIVDVGAGTGAIGLALLSTRPGVEVTAVEPHPTAQA 194 Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEGLF---DVIVSNPPYIESVIVDCLGLEVRDFDP 192 + + NA G+++R L V + D+IV+N PY+ + E+R D Sbjct: 195 LIRRNAQRLGLADRLHVLCGR-LQDVALAWDQADLIVANLPYVPTTRSSTAAEEIRHED- 252 Query: 193 RISLDGGIDGLS 204 ++ G DGL+ Sbjct: 253 EGAIYAGEDGLA 264 >gi|298346686|ref|YP_003719373.1| putative 16S rRNA methyltransferase [Mobiluncus curtisii ATCC 43063] gi|298236747|gb|ADI67879.1| possible 16S rRNA methyltransferase [Mobiluncus curtisii ATCC 43063] Length = 167 Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust. Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 1/74 (1%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 ++D+G G G + L L E P + VD++ +ALE+ ++NA NG+ ++D F++ Sbjct: 27 LVDVGCGWGPLALTLAAECPSAQVYAVDVNARALELTRANATANGLHNIQVLSEADAFAA 86 Query: 161 V-EGLFDVIVSNPP 173 + DVI SNPP Sbjct: 87 LGPNSVDVIWSNPP 100 >gi|295669049|ref|XP_002795073.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb01] gi|226285766|gb|EEH41332.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb01] Length = 534 Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust. Identities = 40/123 (32%), Positives = 55/123 (44%), Gaps = 15/123 (12%) Query: 35 RFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETEL-------LVDSALA 87 R L + + + + ILG + F + + PRPETE L+ S Sbjct: 153 RLRLREMVRQRARGVPLQYILGDQPFGELEILCQRGVLIPRPETESYTTRTANLLLSKFK 212 Query: 88 FSLPRIEKRDVVRILDLGTGTGAVCLALLKES------PFFKGVGVDISCKALEIAKSNA 141 F + +RILDL TGTG C+ LL S P + GVDIS +ALE+A+ N Sbjct: 213 FKSESDKHPPTLRILDLCTGTG--CIPLLLHSLLAPAFPQLQICGVDISARALELARENL 270 Query: 142 VTN 144 N Sbjct: 271 EHN 273 >gi|304389605|ref|ZP_07371567.1| 16S rRNA methyltransferase [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|304327158|gb|EFL94394.1| 16S rRNA methyltransferase [Mobiluncus curtisii subsp. curtisii ATCC 35241] Length = 214 Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust. Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 1/74 (1%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 ++D+G G G + L L E P + VD++ +ALE+ ++NA NG+ ++D F++ Sbjct: 73 LVDVGCGWGPLALTLAAERPSAQVYAVDVNARALELTRANATANGLHNIQVLSEADAFAA 132 Query: 161 V-EGLFDVIVSNPP 173 + DVI SNPP Sbjct: 133 LGPNSVDVIWSNPP 146 >gi|134094899|ref|YP_001099974.1| hypothetical protein HEAR1692 [Herminiimonas arsenicoxydans] gi|133738802|emb|CAL61849.1| Conserved hypothetical protein, putative SAM-dependent methyltransferase [Herminiimonas arsenicoxydans] Length = 373 Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust. Identities = 33/104 (31%), Positives = 53/104 (50%), Gaps = 4/104 (3%) Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162 D+GTGTG V ALL K + D +AL A+ N + +R D +++D F Sbjct: 200 DIGTGTG-VIAALLAHRGVAKVIATDQDARALACARENMTRLDMRDRVDVIEADLFPP-- 256 Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206 G +IV NPP++ + + + D D R+ L G ++GL+ + Sbjct: 257 GKAALIVCNPPWLPARPNSSIEHAIYDPDSRM-LRGFLNGLAAH 299 >gi|83311262|ref|YP_421526.1| O-methyltransferase [Magnetospirillum magneticum AMB-1] gi|82946103|dbj|BAE50967.1| Predicted O-methyltransferase [Magnetospirillum magneticum AMB-1] Length = 255 Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust. Identities = 33/107 (30%), Positives = 49/107 (45%), Gaps = 4/107 (3%) Query: 72 FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131 +PR +D L + + R R+LDLG G GA L LL P + G+++ Sbjct: 20 LQPRDGYRAAIDPVLLAAA--LGARPGERVLDLGCGVGAAALCLLARCPDVEVDGLEVQE 77 Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL--FDVIVSNPPYIE 176 E+A+ NAV N V F D GL + +++NPP+ E Sbjct: 78 TLAELARRNAVLNAVEGCFGIHLGDAAKPPAGLGGYHHVMTNPPFFE 124 >gi|94311751|ref|YP_584961.1| methyltransferase small [Cupriavidus metallidurans CH34] gi|93355603|gb|ABF09692.1| methylase of polypeptide chain release factors [Cupriavidus metallidurans CH34] Length = 379 Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust. Identities = 36/120 (30%), Positives = 58/120 (48%), Gaps = 14/120 (11%) Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 D+GTGTG V ALL + + VG D +AL A++N G++ + +++D F Sbjct: 205 FDIGTGTG-VLAALLAQRGVKRVVGTDQDARALGNARANIERLGLTGDVEIIEADLFP-- 261 Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221 EG ++V NPP++ + + V D D R+ R +G++ HL DG Sbjct: 262 EGRAPLVVCNPPWVPARPSSPIEHAVFDPDSRM-----------LRGFLNGLAAHLTPDG 310 >gi|270489799|ref|ZP_06206873.1| methyltransferase small domain protein [Yersinia pestis KIM D27] gi|270338303|gb|EFA49080.1| methyltransferase small domain protein [Yersinia pestis KIM D27] Length = 226 Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust. Identities = 29/85 (34%), Positives = 43/85 (50%), Gaps = 4/85 (4%) Query: 100 RILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 R+LD+G G+G + L + + S P + GV++ A + A SN + +ER Q D Sbjct: 28 RVLDIGCGSGLIALMIAQRSLPQVQIDGVELEPAAAQQASSNVELSPWAERIHIHQQDIH 87 Query: 159 SSVEG---LFDVIVSNPPYIESVIV 180 E +D+IVSNPPY I Sbjct: 88 QFAENHPHQYDLIVSNPPYFAPAIA 112 >gi|251809958|ref|ZP_04824431.1| 16S rRNA methyltransferase [Staphylococcus epidermidis BCM-HMP0060] gi|282875008|ref|ZP_06283883.1| methyltransferase small domain protein [Staphylococcus epidermidis SK135] gi|251806501|gb|EES59158.1| 16S rRNA methyltransferase [Staphylococcus epidermidis BCM-HMP0060] gi|281296336|gb|EFA88855.1| methyltransferase small domain protein [Staphylococcus epidermidis SK135] gi|329734650|gb|EGG70957.1| methyltransferase small domain protein [Staphylococcus epidermidis VCU028] Length = 244 Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust. Identities = 33/97 (34%), Positives = 52/97 (53%), Gaps = 6/97 (6%) Query: 78 TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137 ++LL+ + L P K I D+G G G + LA+ K SP + +DI+ +AL +A Sbjct: 87 SDLLIKTFLKEHPPGPSKT----IADVGCGYGPIGLAIGKASPHHQITMLDINNRALALA 142 Query: 138 KSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPP 173 + N N V + ++SD S+V FD I++NPP Sbjct: 143 EMNKTKNQV-DNVTIMESDCLSAVNHQCFDYILTNPP 178 >gi|83319521|ref|YP_424011.1| N-6 adenine-specific DNA methylases, putative [Mycoplasma capricolum subsp. capricolum ATCC 27343] gi|83283407|gb|ABC01339.1| N-6 adenine-specific DNA methylases, putative [Mycoplasma capricolum subsp. capricolum ATCC 27343] Length = 220 Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust. Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 4/80 (5%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW-- 157 +I D GT + L L K + K +GV+I KA+EIA N NG+ ++ + + +D Sbjct: 23 KICDFGTNNAVIPLILSKYTKA-KIIGVEIQNKAVEIANENIKLNGLEDQIEIVHADIKE 81 Query: 158 FSSVEGL-FDVIVSNPPYIE 176 FS + FD++V NPP+ + Sbjct: 82 FSKLHNQEFDLVVCNPPFFK 101 >gi|152973291|ref|YP_001338437.1| 16S ribosomal RNA m2G1207 methyltransferase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238892958|ref|YP_002917692.1| 16S ribosomal RNA m2G1207 methyltransferase [Klebsiella pneumoniae NTUH-K2044] gi|226712958|sp|A6THY6|RSMC_KLEP7 RecName: Full=Ribosomal RNA small subunit methyltransferase C; AltName: Full=16S rRNA m2G1207 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rsmC gi|150958140|gb|ABR80170.1| 16S ribosomal RNA m2G1207 methyltransferase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238545274|dbj|BAH61625.1| 16S ribosomal RNA m2G1207 methyltransferase [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length = 342 Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust. Identities = 39/132 (29%), Positives = 58/132 (43%), Gaps = 23/132 (17%) Query: 90 LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 L +E ++LD+G G G + AL SP + D+S A+E +++ NG++ Sbjct: 189 LSTLEPHTKGKVLDVGCGAGVLAAALASHSPKVRLTLCDVSAPAVEASRATLAANGLAG- 247 Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209 D S+ FS V G FD+I+SNPP+ DG L + + Sbjct: 248 -DVFASNVFSEVNGRFDMIISNPPF---------------------HDGLQTSLEAAQAL 285 Query: 210 ADGVSRHLNKDG 221 G RHLN G Sbjct: 286 IRGAVRHLNSGG 297 >gi|311029039|ref|ZP_07707129.1| hypothetical protein Bm3-1_00509 [Bacillus sp. m3-13] Length = 96 Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust. Identities = 32/88 (36%), Positives = 46/88 (52%), Gaps = 6/88 (6%) Query: 87 AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146 AF P +E R ILD+G G G + L+L K P +D++ +A+E+AK N N V Sbjct: 5 AFEEPEVEGR----ILDVGCGYGPIGLSLAKFYPHRHVDMIDVNERAVELAKENGSINKV 60 Query: 147 SERFDTLQSDWFSSVEGL-FDVIVSNPP 173 E SD + +V + I+SNPP Sbjct: 61 -ENITVFTSDIYENVTSTDYAAILSNPP 87 >gi|312115017|ref|YP_004012613.1| methyltransferase type 11 [Rhodomicrobium vannielii ATCC 17100] gi|311220146|gb|ADP71514.1| Methyltransferase type 11 [Rhodomicrobium vannielii ATCC 17100] Length = 255 Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust. Identities = 28/86 (32%), Positives = 42/86 (48%), Gaps = 9/86 (10%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+L+ G G GA L LL P GV+I +A+ NA N ++ +F +D + Sbjct: 46 RVLEAGCGAGAASLCLLARVPGVSVTGVEIDAGLAALARENATENDLAAQFTIANADLTA 105 Query: 160 S-----VEGLF----DVIVSNPPYIE 176 S GLF D +++NPP+ E Sbjct: 106 SWTELEAAGLFREAYDHVIANPPFFE 131 >gi|187477318|ref|YP_785342.1| hypothetical protein BAV0813 [Bordetella avium 197N] gi|115421904|emb|CAJ48424.1| conserved hypothetical protein [Bordetella avium 197N] Length = 379 Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust. Identities = 39/121 (32%), Positives = 54/121 (44%), Gaps = 14/121 (11%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 I D+GTGTG V A+L +G D+ +AL A+ N G+S R ++D F Sbjct: 203 IFDIGTGTG-VLAAVLARRCAQPVIGTDLDPRALACARDNLARLGLSARVSLQRADLFP- 260 Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220 EG +IV NPP+I + + V D + R+ R GVS HL Sbjct: 261 -EGKAALIVCNPPWIPAKPSSPIEYAVYDPNSRM-----------LRAYLQGVSGHLLPG 308 Query: 221 G 221 G Sbjct: 309 G 309 >gi|15897324|ref|NP_341929.1| hypothetical protein SSO0392 [Sulfolobus solfataricus P2] gi|284173336|ref|ZP_06387305.1| hypothetical protein Ssol98_01585 [Sulfolobus solfataricus 98/2] gi|13813541|gb|AAK40719.1| Conserved hypothetical protein [Sulfolobus solfataricus P2] gi|261601999|gb|ACX91602.1| methyltransferase small [Sulfolobus solfataricus 98/2] Length = 186 Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust. Identities = 27/75 (36%), Positives = 43/75 (57%), Gaps = 2/75 (2%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 + D+G G G + + L ++P K VD++ A+++AK NA NGV R ++SD F + Sbjct: 49 VADVGCGYGPIGIYLALKNPNLKVYMVDVNYIAIKLAKKNAKLNGVENRTIIVKSDIFDN 108 Query: 161 --VEGLFDVIVSNPP 173 ++ F I SNPP Sbjct: 109 IPIDVKFTAIYSNPP 123 >gi|42560604|ref|NP_975055.1| methyltransferase [Mycoplasma mycoides subsp. mycoides SC str. PG1] gi|42492100|emb|CAE76697.1| Methyltransferase [Mycoplasma mycoides subsp. mycoides SC str. PG1] gi|301320502|gb|ADK69145.1| methyltransferase small domain protein [Mycoplasma mycoides subsp. mycoides SC str. Gladysdale] Length = 240 Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust. Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 4/80 (5%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW-- 157 +I D GT + L L K + K +GV+I KA+EIA N NG+ ++ + + +D Sbjct: 43 KICDFGTNNAVIPLILSKYTRA-KIIGVEIQNKAVEIANENIKLNGLEDQIEIIHADIKE 101 Query: 158 FSSVEGL-FDVIVSNPPYIE 176 FS + FD++V NPP+ + Sbjct: 102 FSKLHNQEFDLVVCNPPFFK 121 >gi|325138357|gb|EGC60926.1| methyltransferase domain protein [Neisseria meningitidis ES14902] gi|325202074|gb|ADY97528.1| methyltransferase domain protein [Neisseria meningitidis M01-240149] Length = 331 Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust. Identities = 35/120 (29%), Positives = 60/120 (50%), Gaps = 14/120 (11%) Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 D+GTG+G V A+L + +G D + KA+ A++N G ++ + ++D F Sbjct: 157 FDIGTGSG-VLAAILAKQGIPSVIGTDTNPKAVACARANIARLGFEKQVEIRETDLFP-- 213 Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221 EG D+IV NPP++ + +E +DP ++ L+ + A +HLN DG Sbjct: 214 EGFADLIVCNPPWLPAKPTSA--VESALYDPESAM------LAAFLRDA---PKHLNPDG 262 >gi|294789277|ref|ZP_06754515.1| methyltransferase domain protein [Simonsiella muelleri ATCC 29453] gi|294482702|gb|EFG30391.1| methyltransferase domain protein [Simonsiella muelleri ATCC 29453] Length = 367 Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust. Identities = 29/95 (30%), Positives = 51/95 (53%), Gaps = 5/95 (5%) Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 D+GTG+G + + LL + K + D + +A++ A +N G + D LQ D+F S Sbjct: 193 FDIGTGSGILAI-LLAQRGVCKILATDNNPRAVQCAHANVARLGFDLQIDVLQQDYFPS- 250 Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL 196 GL ++IV NPP++ + +E +DP ++ Sbjct: 251 -GLANLIVCNPPWLPAKPTS--AIETALYDPNHTM 282 >gi|189461316|ref|ZP_03010101.1| hypothetical protein BACCOP_01966 [Bacteroides coprocola DSM 17136] gi|189431845|gb|EDV00830.1| hypothetical protein BACCOP_01966 [Bacteroides coprocola DSM 17136] Length = 236 Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust. Identities = 44/131 (33%), Positives = 59/131 (45%), Gaps = 13/131 (9%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+LD+GTGTG + L + + S VG DI +A+E A N + R + D Sbjct: 40 RVLDIGTGTGLIALMVAQRSAACV-VGTDIDGEAVEQAMENVNASPWKNRICICRKDVMQ 98 Query: 160 ---SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216 G FDVIVSNPPY EVR D R L+ + + V + Sbjct: 99 MNGEEYGSFDVIVSNPPYFVE--------EVRCPDERRDTARHTGNLT-FGNLLTAVEKL 149 Query: 217 LNKDGLCSVEI 227 L +DG+ SV I Sbjct: 150 LTEDGVFSVII 160 >gi|26553518|ref|NP_757452.1| S-adenosylmethionine-dependent methyltransferase [Mycoplasma penetrans HF-2] gi|26453524|dbj|BAC43856.1| S-adenosylmethionine-dependent methyltransferase [Mycoplasma penetrans HF-2] Length = 290 Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust. Identities = 52/208 (25%), Positives = 89/208 (42%), Gaps = 17/208 (8%) Query: 60 FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR--DVVRILDLGTGTG--AVCLAL 115 FY + + F PR ETE ++D A+ +K+ D ILDL +G+G A ++ Sbjct: 89 FYGLSFFIKKGCFVPRQETEYMLDWAVK------QKKLIDKKYILDLCSGSGVLANTISY 142 Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF---DVIVSNP 172 +K++ +GV+ + ++ N + +F ++SD F + D I+ NP Sbjct: 143 IKKNKDAIVIGVEKNRTPYKVGVKNQRNLKLKTQF--IKSDIFKIDRSHYEKCDFIICNP 200 Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232 PYI+ D +P+ +L +G Y + L EIG+NQK Sbjct: 201 PYIDKN--DPNVDPSTKCEPKQALFAPQNGYYFYFRFLSEIYPILANGTEIIFEIGFNQK 258 Query: 233 VDVVRIFESRKLFLVNAFKDYGGNDRVL 260 ++ + + + KD DRVL Sbjct: 259 EEIEKFLIKNNITVFKFLKDLDDKDRVL 286 >gi|325140538|gb|EGC63059.1| methyltransferase domain protein [Neisseria meningitidis CU385] gi|325200137|gb|ADY95592.1| Methyltransferase small domain protein [Neisseria meningitidis H44/76] Length = 310 Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust. Identities = 35/120 (29%), Positives = 60/120 (50%), Gaps = 14/120 (11%) Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 D+GTG+G V A+L + +G D + KA+ A++N G ++ + ++D F Sbjct: 136 FDIGTGSG-VLAAILAKQGIPSVIGTDTNPKAVACARANIARLGFEKQVEIRETDLFP-- 192 Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221 EG D+IV NPP++ + +E +DP ++ L+ + A +HLN DG Sbjct: 193 EGFADLIVCNPPWLPAKPTSA--VESALYDPESAM------LAAFLRDA---PKHLNPDG 241 >gi|312069466|ref|XP_003137695.1| methylase [Loa loa] gi|307767142|gb|EFO26376.1| methylase [Loa loa] Length = 210 Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust. Identities = 38/125 (30%), Positives = 66/125 (52%), Gaps = 12/125 (9%) Query: 60 FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAV---CLALL 116 Y + +EP +T LL+D AL +E+ + ++++G+G+G V C LL Sbjct: 6 LYRITDEQKESVYEPAEDTFLLLD-ALEEDKEALEQLEPNVVVEIGSGSGIVSVFCQQLL 64 Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNP 172 + P F + D++ KAL+ ++ A N VS + +Q D S++ GL DV++ NP Sbjct: 65 R-VPVFT-LTTDMNFKALQCTRTTAQLNNVS--VEAVQCDLLSALNHRLCGLVDVLLFNP 120 Query: 173 PYIES 177 PY+ + Sbjct: 121 PYVPT 125 >gi|161870075|ref|YP_001599245.1| hypothetical protein NMCC_1113 [Neisseria meningitidis 053442] gi|161595628|gb|ABX73288.1| conserved hypothetical protein [Neisseria meningitidis 053442] Length = 306 Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust. Identities = 35/120 (29%), Positives = 60/120 (50%), Gaps = 14/120 (11%) Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 D+GTG+G V A+L + +G D + KA+ A++N G ++ + ++D F Sbjct: 132 FDIGTGSG-VLAAILAKQGIPSVIGTDTNPKAVACARANIARLGFEKQVEIRETDLFP-- 188 Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221 EG D+IV NPP++ + +E +DP ++ L+ + A +HLN DG Sbjct: 189 EGFADLIVCNPPWLPAKPTSA--VESALYDPESAM------LAAFLRDA---PKHLNPDG 237 >gi|254805011|ref|YP_003083232.1| hypothetical protein NMO_1044 [Neisseria meningitidis alpha14] gi|254668553|emb|CBA06012.1| conserved hypothetical protein [Neisseria meningitidis alpha14] Length = 367 Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust. Identities = 35/120 (29%), Positives = 60/120 (50%), Gaps = 14/120 (11%) Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 D+GTG+G V A+L + +G D + KA+ A++N G ++ + ++D F Sbjct: 193 FDIGTGSG-VLAAILAKQGIPSVIGTDTNPKAVACARANIARLGFEKQVEIRETDLFP-- 249 Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221 EG D+IV NPP++ + +E +DP ++ L+ + A +HLN DG Sbjct: 250 EGFVDLIVCNPPWLPAKPTSA--VESALYDPESAM------LAAFLRDA---PKHLNPDG 298 >gi|15677104|ref|NP_274256.1| hypothetical protein NMB1232 [Neisseria meningitidis MC58] gi|7226471|gb|AAF41613.1| conserved hypothetical protein [Neisseria meningitidis MC58] gi|316985091|gb|EFV64044.1| methyltransferase small domain protein [Neisseria meningitidis H44/76] Length = 306 Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust. Identities = 35/120 (29%), Positives = 60/120 (50%), Gaps = 14/120 (11%) Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 D+GTG+G V A+L + +G D + KA+ A++N G ++ + ++D F Sbjct: 132 FDIGTGSG-VLAAILAKQGIPSVIGTDTNPKAVACARANIARLGFEKQVEIRETDLFP-- 188 Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221 EG D+IV NPP++ + +E +DP ++ L+ + A +HLN DG Sbjct: 189 EGFADLIVCNPPWLPAKPTSA--VESALYDPESAM------LAAFLRDA---PKHLNPDG 237 >gi|324990377|gb|EGC22315.1| type I restriction-modification system DNA-methyltransferase [Streptococcus sanguinis SK353] Length = 538 Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust. Identities = 40/150 (26%), Positives = 67/150 (44%), Gaps = 22/150 (14%) Query: 94 EKRDVVRILDLGTGTGAVCLALLKESPFFKG------VGVDISCKALEIAKSNAVTNGVS 147 E D R+ D G+G++ L + KE P K G +++ +A+ N + +GV+ Sbjct: 212 ENDDQFRVYDPTMGSGSLLLTVQKELPEGKREGSVAFYGQELNTTTYNLARMNLMMHGVN 271 Query: 148 ------ERFDTLQSDW-FSSVEGL-----FDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195 +R DTL +DW F+ +G+ FD +V+NPPY + + + R D R Sbjct: 272 YRNMNLKRGDTLDTDWPFAEKDGIQLPLKFDAVVANPPYSQKWEIKSID---RSKDSRFK 328 Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225 + Y I G+ HL G ++ Sbjct: 329 FGVAPASKADYAFILHGL-YHLESTGTMAI 357 >gi|262375965|ref|ZP_06069196.1| predicted protein [Acinetobacter lwoffii SH145] gi|262309059|gb|EEY90191.1| predicted protein [Acinetobacter lwoffii SH145] Length = 317 Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust. Identities = 46/158 (29%), Positives = 77/158 (48%), Gaps = 27/158 (17%) Query: 94 EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV-DISCKALEIAKSNAVTNGVSERFDT 152 + R R++++ GT A +++ + P + V D++ KAL ++ N G++ Sbjct: 131 QPRPFKRVVEMCCGTSAAAISIARHFPAVNEMMVADLNPKALLYSQINISFAGLN-HIHP 189 Query: 153 LQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG--IDG--LSHYRT 208 +QS+ FS+++G FD+I +NPPY+ D + R GG +DG LS +R Sbjct: 190 VQSNLFSNLDGKFDLIFANPPYL------------IDPEQRQYRHGGNALDGCDLS-FRI 236 Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246 I +G+ R LN G + G V + E LFL Sbjct: 237 IKEGLQR-LNSGGHLFLYTG-------VTVTEHGNLFL 266 >gi|297566408|ref|YP_003685380.1| ribosomal L11 methyltransferase [Meiothermus silvanus DSM 9946] gi|296850857|gb|ADH63872.1| ribosomal L11 methyltransferase [Meiothermus silvanus DSM 9946] Length = 253 Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust. Identities = 35/110 (31%), Positives = 53/110 (48%), Gaps = 21/110 (19%) Query: 76 PETELLVDSALAFSLPRIEK------------RDVVRILDLGTGTGAVCLALLKESPFFK 123 PE +L++ +AF E + +R+LDLGTG+G + +A + Sbjct: 87 PEQRILLEPGMAFGTGHHETTRMALEALAERVKPGMRVLDLGTGSGILAIAAQMLGAW-- 144 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERF--DTLQSDWFSSVEGLFDVIVSN 171 VGVD + A+ NA NGVS F TL+ + G+FD+IV+N Sbjct: 145 AVGVDNDPAVIPQARHNAAANGVSPEFFLGTLE-----NAHGVFDLIVAN 189 >gi|117618463|ref|YP_858125.1| SmtA protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|262827849|sp|A0KPC4|TRMN6_AERHH RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName: Full=tRNA m6A37 methyltransferase gi|117559870|gb|ABK36818.1| SmtA protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 236 Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust. Identities = 26/76 (34%), Positives = 42/76 (55%), Gaps = 1/76 (1%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 R+LD+G+G+G + L L + SP + V++ A A+ NA + ER ++S Sbjct: 41 RVLDIGSGSGLIALMLAQRSPADCRIDAVELDSNAARQARENAAASPWHERVTVIESAIQ 100 Query: 159 SSVEGLFDVIVSNPPY 174 + +D+IVSNPPY Sbjct: 101 TYQATPYDLIVSNPPY 116 >gi|319948430|ref|ZP_08022568.1| hypothetical protein ES5_03648 [Dietzia cinnamea P4] gi|319437912|gb|EFV92894.1| hypothetical protein ES5_03648 [Dietzia cinnamea P4] Length = 474 Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust. Identities = 40/135 (29%), Positives = 62/135 (45%), Gaps = 15/135 (11%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LD+GTG G + L + G DI+ + LE+A + N + R + L+ WF Sbjct: 105 VLDVGTGCGVQMVHALGTA--DSATGTDITPRCLELAAATLAINDL--RAELLRGSWFEP 160 Query: 161 VEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 V G FD IV+NPP++ V G R+ ++LDG RT+ G HL Sbjct: 161 VAGRRFDRIVANPPFV--VGPPETGHSYRESG--LALDGA------SRTVVSGAPEHLAD 210 Query: 220 DGLCSVEIGYNQKVD 234 G + + ++ D Sbjct: 211 GGTAVMLASWVERED 225 >gi|261392506|emb|CAX50057.1| putative methyltransferase [Neisseria meningitidis 8013] Length = 306 Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust. Identities = 35/120 (29%), Positives = 60/120 (50%), Gaps = 14/120 (11%) Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 D+GTG+G V A+L + +G D + KA+ A++N G ++ + ++D F Sbjct: 132 FDIGTGSG-VLAAILAKQGIPSVIGTDTNPKAVACARANIARLGFEKQVEIRETDLFP-- 188 Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221 EG D+IV NPP++ + +E +DP ++ L+ + A +HLN DG Sbjct: 189 EGFADLIVCNPPWLPAKPTSA--VESALYDPESAM------LAAFLRDA---PKHLNPDG 237 >gi|229542213|ref|ZP_04431273.1| methyltransferase small [Bacillus coagulans 36D1] gi|229326633|gb|EEN92308.1| methyltransferase small [Bacillus coagulans 36D1] Length = 200 Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust. Identities = 28/74 (37%), Positives = 43/74 (58%), Gaps = 2/74 (2%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LD+G G G + LAL P VDI+ +A+E+A+ NA N +S +S+ F + Sbjct: 62 VLDMGCGYGPIGLALATSFPGRHVHMVDINTRAVELAEKNAARNHIS-NVSIYESNLFEN 120 Query: 161 VE-GLFDVIVSNPP 173 V+ G F +I +NPP Sbjct: 121 VKSGPFALIATNPP 134 >gi|242308816|ref|ZP_04807971.1| protoporphyrinogen oxidase [Helicobacter pullorum MIT 98-5489] gi|239524649|gb|EEQ64515.1| protoporphyrinogen oxidase [Helicobacter pullorum MIT 98-5489] Length = 202 Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust. Identities = 54/205 (26%), Positives = 91/205 (44%), Gaps = 17/205 (8%) Query: 60 FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119 FY +S T PRPETE+L+D A L +++ I + LL++ Sbjct: 3 FYGEEFYISHGTLIPRPETEILIDKAKEIILQH-SCKNIAEIGIGSGIISIMLSLLLQDY 61 Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVS--ERFDTLQSDWFSSVEGLFDVIVSNPPYIES 177 P K DIS ++L A N +S + + + D+ + + FD+++SNPPYI++ Sbjct: 62 P-LKFYASDISPESLFNAYVNLKKFKISNLKLYKSAFLDFNTQNKLSFDLLISNPPYIKN 120 Query: 178 VIVDCLGLEVRDFDPRISLDGGI--DGLSHYRTIADGVSR--HLNKDGLCSVEIGYNQKV 233 D + ++P +L GG D + H + ++ HL +C E+GYNQ+ Sbjct: 121 ---DEILPHSLSYEPSKALFGGEVGDEILHQIILLAYNAKIPHL----IC--EMGYNQRQ 171 Query: 234 DVVRIFESRKLFLVNAFKDYGGNDR 258 + + +KD DR Sbjct: 172 SIENFIHKIPHKKIEFYKDLANLDR 196 >gi|227495176|ref|ZP_03925492.1| possible 16S rRNA methyltransferase [Actinomyces coleocanis DSM 15436] gi|226831628|gb|EEH64011.1| possible 16S rRNA methyltransferase [Actinomyces coleocanis DSM 15436] Length = 218 Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust. Identities = 43/149 (28%), Positives = 70/149 (46%), Gaps = 19/149 (12%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS--ERFDTLQSDW 157 R LD+G G G + L K SP K VD++ +AL++ K NA NG + E + ++ Sbjct: 77 RFLDVGCGWGVISTLLGKFSPDAKIWAVDVNGRALDLTKRNANANGCTNVETYYAHEALE 136 Query: 158 FSSVEGL-FDVIVSNPPY------IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI- 209 + EGL FD+I SNPP +++D L L D G+ L + + Sbjct: 137 KARAEGLQFDLIWSNPPIRVGKAETHQILLDWLSLLA---------DEGVAWLIVAKNLG 187 Query: 210 ADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238 AD ++ LN G + + + ++R+ Sbjct: 188 ADSLTTWLNDQGFQAEKAASKKGFRLLRV 216 >gi|170783110|ref|YP_001711444.1| putative methyl transferase [Clavibacter michiganensis subsp. sepedonicus] gi|169157680|emb|CAQ02881.1| putative methyl transferase [Clavibacter michiganensis subsp. sepedonicus] Length = 418 Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust. Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 2/90 (2%) Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 +DLG GTG + A+ P + + D S A++ A++ NGV+E ++ D S+V Sbjct: 275 VDLGCGTGVIASAVALARPGIRVIATDQSWAAVDSARATVAANGVAEWVTVVRDDAGSTV 334 Query: 162 -EGLFDVIVSNPPYIESVIVDCLGLEVRDF 190 +G D+++ NPP+ V GL R F Sbjct: 335 PDGSADLVLLNPPFHTGATVHA-GLAPRLF 363 >gi|56697367|ref|YP_167735.1| hypothetical protein SPO2520 [Ruegeria pomeroyi DSS-3] gi|56679104|gb|AAV95770.1| conserved hypothetical protein [Ruegeria pomeroyi DSS-3] Length = 403 Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust. Identities = 41/150 (27%), Positives = 65/150 (43%), Gaps = 27/150 (18%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 R+LD+ + G LA+L + VD S AL +A+ A+ +G++ RF+T Q D F Sbjct: 231 TRVLDVFSHVGGFALAMLAGGAG-SALAVDGSAPALALAEQGALASGLAGRFETRQGDAF 289 Query: 159 SSVEGL------FDVIVSNPPYIESVIVDCLGLEVRDFDP-RISLDGGIDGLSHYRTIAD 211 + L FDV++ +PP F P + +LD G+ +A Sbjct: 290 DVLTALAEEGETFDVVICDPPA---------------FAPSKQALDAGLRAYERVARLAA 334 Query: 212 GVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 + R GLCS + D+ R E+ Sbjct: 335 ALVRPGGYLGLCSC----SHAADLSRFREA 360 >gi|325134521|gb|EGC57166.1| methyltransferase domain protein [Neisseria meningitidis M13399] Length = 331 Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust. Identities = 35/120 (29%), Positives = 60/120 (50%), Gaps = 14/120 (11%) Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 D+GTG+G V A+L + +G D + KA+ A++N G ++ + ++D F Sbjct: 157 FDIGTGSG-VLAAILAKQGIPSVIGTDTNPKAVACARANIARLGFEKQVEIRETDLFP-- 213 Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221 EG D+IV NPP++ + +E +DP ++ L+ + A +HLN DG Sbjct: 214 EGFADLIVCNPPWLPAKPTSA--VESALYDPESAM------LAAFLRDA---PKHLNPDG 262 >gi|108808437|ref|YP_652353.1| hypothetical protein YPA_2443 [Yersinia pestis Antiqua] gi|108811360|ref|YP_647127.1| hypothetical protein YPN_1197 [Yersinia pestis Nepal516] gi|145598846|ref|YP_001162922.1| hypothetical protein YPDSF_1562 [Yersinia pestis Pestoides F] gi|153950132|ref|YP_001400108.1| methyltransferase family protein [Yersinia pseudotuberculosis IP 31758] gi|162420057|ref|YP_001607926.1| hypothetical protein YpAngola_A3602 [Yersinia pestis Angola] gi|165925329|ref|ZP_02221161.1| methyltransferase family protein [Yersinia pestis biovar Orientalis str. F1991016] gi|165937024|ref|ZP_02225589.1| methyltransferase family protein [Yersinia pestis biovar Orientalis str. IP275] gi|166008289|ref|ZP_02229187.1| methyltransferase family protein [Yersinia pestis biovar Antiqua str. E1979001] gi|166212275|ref|ZP_02238310.1| methyltransferase family protein [Yersinia pestis biovar Antiqua str. B42003004] gi|167398816|ref|ZP_02304340.1| methyltransferase family protein [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167421141|ref|ZP_02312894.1| methyltransferase family protein [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167470538|ref|ZP_02335242.1| hypothetical protein YpesF_22287 [Yersinia pestis FV-1] gi|294504500|ref|YP_003568562.1| hypothetical protein YPZ3_2390 [Yersinia pestis Z176003] gi|123072696|sp|Q1C564|TRMN6_YERPA RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName: Full=tRNA m6A37 methyltransferase gi|123373349|sp|Q1CKF3|TRMN6_YERPN RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName: Full=tRNA m6A37 methyltransferase gi|262828868|sp|A7FFT0|TRMN6_YERP3 RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName: Full=tRNA m6A37 methyltransferase gi|262828901|sp|A9R3Z3|TRMN6_YERPG RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName: Full=tRNA m6A37 methyltransferase gi|262828911|sp|A4TKY7|TRMN6_YERPP RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName: Full=tRNA m6A37 methyltransferase gi|108775008|gb|ABG17527.1| hypothetical protein YPN_1197 [Yersinia pestis Nepal516] gi|108780350|gb|ABG14408.1| hypothetical protein YPA_2443 [Yersinia pestis Antiqua] gi|145210542|gb|ABP39949.1| hypothetical protein YPDSF_1562 [Yersinia pestis Pestoides F] gi|152961627|gb|ABS49088.1| methyltransferase family protein [Yersinia pseudotuberculosis IP 31758] gi|162352872|gb|ABX86820.1| methyltransferase family protein [Yersinia pestis Angola] gi|165914887|gb|EDR33499.1| methyltransferase family protein [Yersinia pestis biovar Orientalis str. IP275] gi|165922936|gb|EDR40087.1| methyltransferase family protein [Yersinia pestis biovar Orientalis str. F1991016] gi|165992671|gb|EDR44972.1| methyltransferase family protein [Yersinia pestis biovar Antiqua str. E1979001] gi|166206206|gb|EDR50686.1| methyltransferase family protein [Yersinia pestis biovar Antiqua str. B42003004] gi|166960630|gb|EDR56651.1| methyltransferase family protein [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167051320|gb|EDR62728.1| methyltransferase family protein [Yersinia pestis biovar Antiqua str. UG05-0454] gi|262362508|gb|ACY59229.1| hypothetical protein YPD4_2322 [Yersinia pestis D106004] gi|262366487|gb|ACY63044.1| hypothetical protein YPD8_2369 [Yersinia pestis D182038] gi|294354959|gb|ADE65300.1| hypothetical protein YPZ3_2390 [Yersinia pestis Z176003] Length = 248 Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust. Identities = 29/85 (34%), Positives = 43/85 (50%), Gaps = 4/85 (4%) Query: 100 RILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 R+LD+G G+G + L + + S P + GV++ A + A SN + +ER Q D Sbjct: 50 RVLDIGCGSGLIALMIAQRSLPQVQIDGVELEPAAAQQASSNVELSPWAERIHIHQQDIH 109 Query: 159 SSVEG---LFDVIVSNPPYIESVIV 180 E +D+IVSNPPY I Sbjct: 110 QFAENHPHQYDLIVSNPPYFAPAIA 134 >gi|167423200|ref|ZP_02314953.1| methyltransferase family protein [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167057370|gb|EDR67116.1| methyltransferase family protein [Yersinia pestis biovar Mediaevalis str. K1973002] Length = 248 Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust. Identities = 29/85 (34%), Positives = 43/85 (50%), Gaps = 4/85 (4%) Query: 100 RILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 R+LD+G G+G + L + + S P + GV++ A + A SN + +ER Q D Sbjct: 50 RVLDIGCGSGLIALMIAQRSLPQVQIDGVELEPAAAQQASSNVELSPWAERIHIHQQDIH 109 Query: 159 SSVEG---LFDVIVSNPPYIESVIV 180 E +D+IVSNPPY I Sbjct: 110 QFAENHPHQYDLIVSNPPYFAPAIA 134 >gi|325128362|gb|EGC51246.1| methyltransferase domain protein [Neisseria meningitidis N1568] Length = 331 Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust. Identities = 35/120 (29%), Positives = 60/120 (50%), Gaps = 14/120 (11%) Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 D+GTG+G V A+L + +G D + KA+ A++N G ++ + ++D F Sbjct: 157 FDIGTGSG-VLAAILAKQGIPSVIGTDTNPKAVACARANIARLGFEKQVEIRETDLFP-- 213 Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221 EG D+IV NPP++ + +E +DP ++ L+ + A +HLN DG Sbjct: 214 EGFADLIVCNPPWLPAKPTSA--VESALYDPESAM------LAAFLRDA---PKHLNPDG 262 >gi|269959613|ref|ZP_06173994.1| conserved hypothetical protein [Vibrio harveyi 1DA3] gi|269835671|gb|EEZ89749.1| conserved hypothetical protein [Vibrio harveyi 1DA3] Length = 239 Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust. Identities = 29/80 (36%), Positives = 42/80 (52%), Gaps = 3/80 (3%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD--W 157 +ILD+GTGTG + L + P + +DI A+E A+ N + S+R +D Sbjct: 45 KILDIGTGTGLLALMCAQRFPNAQITALDIEISAIEAAQKNFTQSPWSDRLWVRHTDVLQ 104 Query: 158 FSSVEGLFDVIVSNPPYIES 177 F S E F+ I+ NPPY S Sbjct: 105 FES-EQRFEHIICNPPYFNS 123 >gi|254453056|ref|ZP_05066493.1| SAM-dependent methyltransferase [Octadecabacter antarcticus 238] gi|198267462|gb|EDY91732.1| SAM-dependent methyltransferase [Octadecabacter antarcticus 238] Length = 404 Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust. Identities = 25/53 (47%), Positives = 33/53 (62%), Gaps = 6/53 (11%) Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPP 173 VD S ALE+AK+ A GV++RF+T Q D F +E L FDV+V +PP Sbjct: 259 VDGSAPALELAKAGAEATGVADRFETRQGDAFDVLEALGAEEEVFDVVVCDPP 311 >gi|113461439|ref|YP_719508.1| SAM-dependent methyltransferase [Haemophilus somnus 129PT] gi|123031428|sp|Q0I4T7|TRMN6_HAES1 RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName: Full=tRNA m6A37 methyltransferase gi|112823482|gb|ABI25571.1| conserved hypothetical protein [Haemophilus somnus 129PT] Length = 236 Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust. Identities = 31/86 (36%), Positives = 44/86 (51%), Gaps = 5/86 (5%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD--- 156 +LDLGTGTG + L L + SP + V++ +A AK N + + + Q D Sbjct: 42 LLDLGTGTGLIALMLAQRSPEHCHISAVELDPQAYLQAKDNIQQSPWANKIKIFQQDIIV 101 Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDC 182 + E FDVI +NPPY + I DC Sbjct: 102 FAQDCEHKFDVITANPPYFKQGI-DC 126 >gi|257452715|ref|ZP_05618014.1| methyltransferase [Fusobacterium sp. 3_1_5R] gi|317059256|ref|ZP_07923741.1| methyltransferase [Fusobacterium sp. 3_1_5R] gi|313684932|gb|EFS21767.1| methyltransferase [Fusobacterium sp. 3_1_5R] Length = 242 Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust. Identities = 35/100 (35%), Positives = 53/100 (53%), Gaps = 8/100 (8%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL-LKESPFFKGVGVDISCKALEIAKSN 140 +DS L +I K+ +ILDLGTG A+ L L LK + + G++I + ++A N Sbjct: 27 LDSLLISEFVKINKQSK-KILDLGTGNAAIPLFLSLKTTG--QIYGLEIQKVSYDLAIKN 83 Query: 141 AVTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPYIE 176 V N + E+ L D + E FD++VSNPP+ E Sbjct: 84 IVLNHLEEQIQILHGDMKNWQEFFPRNSFDIVVSNPPFFE 123 >gi|318058889|ref|ZP_07977612.1| hypothetical protein SSA3_13145 [Streptomyces sp. SA3_actG] Length = 213 Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust. Identities = 39/117 (33%), Positives = 54/117 (46%), Gaps = 9/117 (7%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LDL TG+GA LALL + D+S +A+ A+ NA G +R L+ D Sbjct: 26 VLDLCTGSGA--LALLAARRGARVCATDLSWRAVVSARINAARAG--QRVRVLRGDLSGP 81 Query: 161 VEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216 V G FD++VSNPPY+ R ++ D G G R + D V H Sbjct: 82 VRGQRFDLVVSNPPYVPDPAARTGPRRGRSHAASLAWDAGPGG----RHLVDRVCAH 134 >gi|302544276|ref|ZP_07296618.1| putative transferase [Streptomyces hygroscopicus ATCC 53653] gi|302461894|gb|EFL24987.1| putative transferase [Streptomyces himastatinicus ATCC 53653] Length = 483 Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust. Identities = 38/135 (28%), Positives = 61/135 (45%), Gaps = 11/135 (8%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 V R LDLGTG+G L + + + D + +AL++A+ +G E D + Sbjct: 136 VKRALDLGTGSGIQALHASRHA--ARVTATDPNPRALDMARLTLALSGAPEP-DLREGSL 192 Query: 158 FSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216 F V G +D+IVSNPP++ + + D + DGG+ G RT+ + H Sbjct: 193 FEPVGGETYDLIVSNPPFV-------ISPRSAEGDRLVYRDGGMSGDDLCRTLVQQSAAH 245 Query: 217 LNKDGLCSVEIGYNQ 231 L G C + + Sbjct: 246 LADGGWCQLLANWQH 260 >gi|289679660|ref|ZP_06500550.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Pseudomonas syringae pv. syringae FF5] Length = 91 Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust. Identities = 23/52 (44%), Positives = 34/52 (65%), Gaps = 1/52 (1%) Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIES 177 D+S ALE+A N +G+ +R T+Q D F + G FD+IVSNPPY+++ Sbjct: 17 ADLSYDALEVANQNIERHGMDDRVYTVQGDGFDGLPGQRFDLIVSNPPYVDA 68 >gi|218768234|ref|YP_002342746.1| hypothetical protein NMA1400 [Neisseria meningitidis Z2491] gi|121052242|emb|CAM08567.1| hypothetical protein NMA1400 [Neisseria meningitidis Z2491] gi|325142497|gb|EGC64901.1| methyltransferase domain protein [Neisseria meningitidis 961-5945] gi|325198365|gb|ADY93821.1| methyltransferase domain protein [Neisseria meningitidis G2136] Length = 331 Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust. Identities = 35/120 (29%), Positives = 60/120 (50%), Gaps = 14/120 (11%) Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 D+GTG+G V A+L + +G D + KA+ A++N G ++ + ++D F Sbjct: 157 FDIGTGSG-VLAAILAKQGIPSVIGTDTNPKAVACARANIARLGFEKQVEIRETDLFP-- 213 Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221 EG D+IV NPP++ + +E +DP ++ L+ + A +HLN DG Sbjct: 214 EGFADLIVCNPPWLPAKPTSA--VESALYDPESAM------LAAFLRDA---PKHLNPDG 262 >gi|317125286|ref|YP_004099398.1| 16S rRNA m(2)G 1207 methyltransferase [Intrasporangium calvum DSM 43043] gi|315589374|gb|ADU48671.1| 16S rRNA m(2)G 1207 methyltransferase [Intrasporangium calvum DSM 43043] Length = 204 Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust. Identities = 44/147 (29%), Positives = 66/147 (44%), Gaps = 13/147 (8%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LDLG G G + L L + SP + GVD++ +AL++A NA GV +D Sbjct: 65 LLDLGCGWGPISLTLARRSPAARVWGVDVNRRALQLAALNAEAAGVDNVTFCEPAD---- 120 Query: 161 VEG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 V G FD I SNPP V L + + PR++ +G + +D + R +N Sbjct: 121 VPGDLRFDTIWSNPPI--HVGKSALHALLERWLPRLAPEGVAHLVVQKHLGSDSLQRWIN 178 Query: 219 KD--GLCSVEIGYNQKVDVVRIFESRK 243 GL + + RI E R+ Sbjct: 179 AQDWGLTCTRLSSTK---AFRILEVRR 202 >gi|251791015|ref|YP_003005736.1| 16S ribosomal RNA m2G1207 methyltransferase [Dickeya zeae Ech1591] gi|247539636|gb|ACT08257.1| rRNA (guanine-N(2)-)-methyltransferase [Dickeya zeae Ech1591] Length = 342 Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust. Identities = 27/111 (24%), Positives = 55/111 (49%), Gaps = 4/111 (3%) Query: 90 LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 L +E ++LDL G G + + + SP + D+ ALE +++ N + + Sbjct: 189 LSTLEPHRKGKVLDLACGAGVLAASFARLSPKIRLTLSDVGAAALEASRATLAANELEGQ 248 Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLE--VRDFDPRISLDG 198 + S+ +S ++G FD+I+SNPP+ + + E +R ++++G Sbjct: 249 --VIASNVYSDIQGRFDLIISNPPFHDGMQTSLHAAEMMIRGAAAHLNMEG 297 >gi|261345449|ref|ZP_05973093.1| SAM-dependent methyltransferase [Providencia rustigianii DSM 4541] gi|282566496|gb|EFB72031.1| SAM-dependent methyltransferase [Providencia rustigianii DSM 4541] Length = 244 Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust. Identities = 29/85 (34%), Positives = 42/85 (49%), Gaps = 3/85 (3%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 V R LD+G+G+G + L L + + V++ A A+ N + +ER + D Sbjct: 45 VQRALDIGSGSGLIALMLAQRNAHLNIDAVELDSDAAAQAQQNFDESPWAERLQIVNQDI 104 Query: 158 FSSVEGL---FDVIVSNPPYIESVI 179 S E +DVIVSNPPY E I Sbjct: 105 ISFSEQTTKQYDVIVSNPPYFEPAI 129 >gi|330466469|ref|YP_004404212.1| methyltransferase small [Verrucosispora maris AB-18-032] gi|328809440|gb|AEB43612.1| methyltransferase small [Verrucosispora maris AB-18-032] Length = 494 Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust. Identities = 30/82 (36%), Positives = 46/82 (56%), Gaps = 5/82 (6%) Query: 95 KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154 +R V LDLGTG+G L L + + D+S +AL A + A NG + ++ L+ Sbjct: 153 RRPVETALDLGTGSGVQALHLSTHA--RQVTATDVSRRALRFAATTAALNG--QDWELLR 208 Query: 155 SDWFSSVEGL-FDVIVSNPPYI 175 D + V G FD++VSNPP++ Sbjct: 209 GDMVAPVAGRRFDLVVSNPPFV 230 >gi|22125188|ref|NP_668611.1| hypothetical protein y1288 [Yersinia pestis KIM 10] gi|21958052|gb|AAM84862.1|AE013731_7 putative enzyme [Yersinia pestis KIM 10] Length = 252 Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust. Identities = 29/85 (34%), Positives = 43/85 (50%), Gaps = 4/85 (4%) Query: 100 RILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 R+LD+G G+G + L + + S P + GV++ A + A SN + +ER Q D Sbjct: 54 RVLDIGCGSGLIALMIAQRSLPQVQIDGVELEPAAAQQASSNVELSPWAERIHIHQQDIH 113 Query: 159 SSVEG---LFDVIVSNPPYIESVIV 180 E +D+IVSNPPY I Sbjct: 114 QFAENHPHQYDLIVSNPPYFAPAIA 138 >gi|84490323|ref|YP_448555.1| hypothetical protein Msp_1545 [Methanosphaera stadtmanae DSM 3091] gi|84373642|gb|ABC57912.1| conserved hypothetical protein [Methanosphaera stadtmanae DSM 3091] Length = 197 Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust. Identities = 38/164 (23%), Positives = 75/164 (45%), Gaps = 19/164 (11%) Query: 60 FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119 + N++ + + P +T LL+D+ + ++ +L++G G G V +A + Sbjct: 3 YENIKYNECDEVYPPAEDTFLLIDNLIV--------KNNDSVLEVGCGCGIVSIAASLNA 54 Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179 K +DI+ A++ K N N + + ++S+ F ++ +D+I+ N PY+ Sbjct: 55 E--KVTSIDINPHAIKCTKENIKLNN-RKNIEVIESNLFEKIDDKYDLILFNTPYLP--- 108 Query: 180 VDCLGLEVRDFDPRIS--LDGGIDGLSHYRTIADGVSRHLNKDG 221 + E D D S DGG+DG + ++L +DG Sbjct: 109 ---VTEEEHDVDDDYSKAWDGGVDGRKVIDAFLEEAPKYLKEDG 149 >gi|54024505|ref|YP_118747.1| putative RNA methyltransferase [Nocardia farcinica IFM 10152] gi|54016013|dbj|BAD57383.1| putative RNA methyltransferase [Nocardia farcinica IFM 10152] Length = 385 Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust. Identities = 34/109 (31%), Positives = 57/109 (52%), Gaps = 4/109 (3%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 + D+GTGTG V A+L + D++ +A+ A+SN G+ +R ++D + + Sbjct: 206 VFDIGTGTG-VLAAVLAQRGAADVRATDLNPRAVRCARSNLRRLGLDDRVHVAEADLWPA 264 Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS-LDGGIDGLSHYRT 208 V D+IV NPP++ L L V +DP + LD + GL+ + T Sbjct: 265 VPAHADLIVCNPPWLPGHPTSALELGV--YDPGSAVLDRFLTGLADHLT 311 >gi|313906141|ref|ZP_07839490.1| Methyltransferase type 11 [Eubacterium cellulosolvens 6] gi|313469028|gb|EFR64381.1| Methyltransferase type 11 [Eubacterium cellulosolvens 6] Length = 246 Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust. Identities = 28/98 (28%), Positives = 50/98 (51%), Gaps = 6/98 (6%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 +D+ L +++K + LDLGTGTG + + L ++ G++I + E+A + Sbjct: 31 IDAVLLSGFAKVKKGE--NALDLGTGTGIIPILLAAKTEGRSFTGLEIQHSSAEMAARSI 88 Query: 142 VTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYI 175 N + +R ++ D + FDV+VSNPPY+ Sbjct: 89 AVNHLEDRISIVEGDIKEAASLFGPASFDVVVSNPPYM 126 >gi|254437351|ref|ZP_05050845.1| Putative RNA methylase family UPF0020 [Octadecabacter antarcticus 307] gi|198252797|gb|EDY77111.1| Putative RNA methylase family UPF0020 [Octadecabacter antarcticus 307] Length = 404 Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust. Identities = 25/53 (47%), Positives = 33/53 (62%), Gaps = 6/53 (11%) Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPP 173 VD S ALE+AK+ A GV++RF+T Q D F +E L FDV+V +PP Sbjct: 259 VDGSAPALELAKAGAEATGVADRFETRQGDAFDVLEALGAEEEVFDVVVCDPP 311 >gi|45442295|ref|NP_993834.1| hypothetical protein YP_2513 [Yersinia pestis biovar Microtus str. 91001] gi|51597215|ref|YP_071406.1| hypothetical protein YPTB2899 [Yersinia pseudotuberculosis IP 32953] gi|149365399|ref|ZP_01887434.1| hypothetical protein YPE_0554 [Yersinia pestis CA88-4125] gi|186896312|ref|YP_001873424.1| methyltransferase small [Yersinia pseudotuberculosis PB1/+] gi|218929781|ref|YP_002347656.1| hypothetical protein YPO2709 [Yersinia pestis CO92] gi|229838272|ref|ZP_04458431.1| predicted S-adenosyl-L-methionine-dependent methyltransferase [Yersinia pestis biovar Orientalis str. PEXU2] gi|229895532|ref|ZP_04510703.1| predicted S-adenosyl-L-methionine-dependent methyltransferase [Yersinia pestis Pestoides A] gi|229898836|ref|ZP_04513981.1| predicted S-adenosyl-L-methionine-dependent methyltransferase [Yersinia pestis biovar Orientalis str. India 195] gi|229901610|ref|ZP_04516732.1| predicted S-adenosyl-L-methionine-dependent methyltransferase [Yersinia pestis Nepal516] gi|81638822|sp|Q667U2|TRMN6_YERPS RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName: Full=tRNA m6A37 methyltransferase gi|123776977|sp|Q74SR9|TRMN6_YERPE RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName: Full=tRNA m6A37 methyltransferase gi|262828876|sp|B2KA56|TRMN6_YERPB RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName: Full=tRNA m6A37 methyltransferase gi|45437159|gb|AAS62711.1| SAM-dependent methyltransferases [Yersinia pestis biovar Microtus str. 91001] gi|51590497|emb|CAH22137.1| conserved hypothetical protein [Yersinia pseudotuberculosis IP 32953] gi|115348392|emb|CAL21328.1| conserved hypothetical protein [Yersinia pestis CO92] gi|149291812|gb|EDM41886.1| hypothetical protein YPE_0554 [Yersinia pestis CA88-4125] gi|186699338|gb|ACC89967.1| methyltransferase small [Yersinia pseudotuberculosis PB1/+] gi|229681539|gb|EEO77633.1| predicted S-adenosyl-L-methionine-dependent methyltransferase [Yersinia pestis Nepal516] gi|229688384|gb|EEO80455.1| predicted S-adenosyl-L-methionine-dependent methyltransferase [Yersinia pestis biovar Orientalis str. India 195] gi|229694638|gb|EEO84685.1| predicted S-adenosyl-L-methionine-dependent methyltransferase [Yersinia pestis biovar Orientalis str. PEXU2] gi|229701338|gb|EEO89366.1| predicted S-adenosyl-L-methionine-dependent methyltransferase [Yersinia pestis Pestoides A] gi|320016082|gb|ADV99653.1| putative S-adenosyl-L-methionine-dependent methyltransferase [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 252 Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust. Identities = 29/85 (34%), Positives = 43/85 (50%), Gaps = 4/85 (4%) Query: 100 RILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 R+LD+G G+G + L + + S P + GV++ A + A SN + +ER Q D Sbjct: 54 RVLDIGCGSGLIALMIAQRSLPQVQIDGVELEPAAAQQASSNVELSPWAERIHIHQQDIH 113 Query: 159 SSVEG---LFDVIVSNPPYIESVIV 180 E +D+IVSNPPY I Sbjct: 114 QFAENHPHQYDLIVSNPPYFAPAIA 138 >gi|227496765|ref|ZP_03927038.1| methyltransferase [Actinomyces urogenitalis DSM 15434] gi|226833718|gb|EEH66101.1| methyltransferase [Actinomyces urogenitalis DSM 15434] Length = 425 Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust. Identities = 41/126 (32%), Positives = 58/126 (46%), Gaps = 10/126 (7%) Query: 58 RDFYNVRLTLSSDTFEPRPETELLVDSALA-----FSLPRIEKRDVVRI-LDLGTGTGAV 111 +D ++R ++SD E L D L +L + R VR LDLG G G Sbjct: 29 QDGADLRWWVASDLGELETGRALEPDHVLGIGGAGLTLASLTPRQPVRTALDLGCGCGIQ 88 Query: 112 CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV-SERFDTLQSDWFSSVEGL-FDVIV 169 L LL+ + V DIS +AL NA G ER + +Q + V G FD+I Sbjct: 89 TLYLLQHAEHV--VATDISTRALAFTAFNAALAGADPERLELVQGSFLEPVAGRRFDLIA 146 Query: 170 SNPPYI 175 +NPP++ Sbjct: 147 TNPPFV 152 >gi|297195650|ref|ZP_06913048.1| conserved hypothetical protein [Streptomyces pristinaespiralis ATCC 25486] gi|197719008|gb|EDY62916.1| conserved hypothetical protein [Streptomyces pristinaespiralis ATCC 25486] Length = 245 Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust. Identities = 30/74 (40%), Positives = 39/74 (52%), Gaps = 3/74 (4%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW-- 157 R+LDLG G G L L P KG GVD+S AL A+ A+ GV ER + D Sbjct: 39 RVLDLGCGGGEWLLRALAAQPALKGEGVDVSEDALSRAREAAIKRGVHERLTLHRHDAAD 98 Query: 158 FSSVEGLFDVIVSN 171 F S FD+++S+ Sbjct: 99 FDSPHA-FDLVISS 111 >gi|121634925|ref|YP_975170.1| hypothetical protein NMC1132 [Neisseria meningitidis FAM18] gi|120866631|emb|CAM10382.1| hypothetical protein NMC1132 [Neisseria meningitidis FAM18] Length = 331 Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust. Identities = 35/120 (29%), Positives = 60/120 (50%), Gaps = 14/120 (11%) Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 D+GTG+G V A+L + +G D + KA+ A++N G ++ + ++D F Sbjct: 157 FDIGTGSG-VLAAILAKQGIPSVIGTDTNPKAVACARANIARLGFEKQVEIRETDLFP-- 213 Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221 EG D+IV NPP++ + +E +DP ++ L+ + A +HLN DG Sbjct: 214 EGFADLIVCNPPWLPAKPTSA--VESALYDPESAM------LAAFLRDA---PKHLNPDG 262 >gi|160900635|ref|YP_001566217.1| methyltransferase small [Delftia acidovorans SPH-1] gi|160366219|gb|ABX37832.1| methyltransferase small [Delftia acidovorans SPH-1] Length = 403 Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 55/106 (51%), Gaps = 4/106 (3%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 + D+GTGTG V ALL + V D+S +AL A+ N G+++R ++D F Sbjct: 228 VWDIGTGTG-VLSALLLHRGVRQVVATDLSDRALACAQDNLQRLGLAQRVSLRKADLFP- 285 Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206 EG ++V NPP++ L V D R+ L G ++GL+ + Sbjct: 286 -EGRAALVVCNPPWLPGKASSLLEQAVYDEGSRM-LRGFVEGLAAH 329 >gi|325132584|gb|EGC55277.1| methyltransferase domain protein [Neisseria meningitidis M6190] gi|325208172|gb|ADZ03624.1| methyltransferase domain protein [Neisseria meningitidis NZ-05/33] Length = 367 Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust. Identities = 35/120 (29%), Positives = 60/120 (50%), Gaps = 14/120 (11%) Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 D+GTG+G V A+L + +G D + KA+ A++N G ++ + ++D F Sbjct: 193 FDIGTGSG-VLAAILAKQGIPSVIGTDTNPKAVACARANIARLGFEKQVEIRETDLFP-- 249 Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221 EG D+IV NPP++ + +E +DP ++ L+ + A +HLN DG Sbjct: 250 EGFADLIVCNPPWLPAKPTSA--VESALYDPESAM------LAAFLRDA---PKHLNPDG 298 >gi|322515350|ref|ZP_08068346.1| rRNA (guanine-N(2)-)-methyltransferase [Actinobacillus ureae ATCC 25976] gi|322118637|gb|EFX90859.1| rRNA (guanine-N(2)-)-methyltransferase [Actinobacillus ureae ATCC 25976] Length = 329 Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust. Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 2/79 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 +ILDLG G G + +L ++ K DI ALE ++ N + + SD FS Sbjct: 192 KILDLGCGAGVIGASLKQQFEKIKLTMSDIHAMALESSRRTLAENALEG--TVVASDVFS 249 Query: 160 SVEGLFDVIVSNPPYIESV 178 +E FD+IVSNPP+ + + Sbjct: 250 HIEERFDLIVSNPPFHDGI 268 >gi|16126353|ref|NP_420917.1| hypothetical protein CC_2114 [Caulobacter crescentus CB15] gi|221235136|ref|YP_002517572.1| methyltransferase [Caulobacter crescentus NA1000] gi|13423601|gb|AAK24085.1| conserved hypothetical protein [Caulobacter crescentus CB15] gi|220964308|gb|ACL95664.1| methyltransferase [Caulobacter crescentus NA1000] Length = 247 Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust. Identities = 41/130 (31%), Positives = 59/130 (45%), Gaps = 20/130 (15%) Query: 53 RILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVC 112 R+LG R VRL + D + P + LL +A +LP R+L+ G G G Sbjct: 10 RVLGGR----VRLRQAPDGYRPGMDAALL--AATCDALPG------QRVLEPGCGVGGAL 57 Query: 113 LALLKESP--FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL----FD 166 LA P F+GV D + +L A N NG++ R Q D + L FD Sbjct: 58 LAAATRRPEAIFQGVERDETAASL--AAENVALNGLTSRVAIAQGDVEAGFRALGLPVFD 115 Query: 167 VIVSNPPYIE 176 +++NPPY + Sbjct: 116 AVMANPPYFD 125 >gi|269986472|gb|EEZ92757.1| methylase [Candidatus Parvarchaeum acidiphilum ARMAN-4] Length = 196 Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust. Identities = 38/126 (30%), Positives = 63/126 (50%), Gaps = 20/126 (15%) Query: 101 ILDLGTGTGAVCLA---LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 +LD+ G+G + L L PF VDI+ KA++ + NA NG+S F+ + SD Sbjct: 31 VLDMCAGSGIIGLNAARLANTVPF-----VDINPKAIKAIEYNARKNGISN-FECINSDL 84 Query: 158 FSSVEG-LFDVIVSNPPYIESVIVD-CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215 F +++ FD+I +NPPY+ + +G +L GG G I +++ Sbjct: 85 FYALDKRKFDIIYANPPYLPKKMEKGWIGY---------ALSGGETGNEITLKIISSLTK 135 Query: 216 HLNKDG 221 HL ++G Sbjct: 136 HLKRNG 141 >gi|307264716|ref|ZP_07546296.1| Ribosomal RNA small subunit methyltransferase C [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|306870028|gb|EFN01792.1| Ribosomal RNA small subunit methyltransferase C [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 231 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 2/79 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LDLG G G + +L ++ K DI ALE ++ N + + SD FS Sbjct: 94 KVLDLGCGAGVIGASLKQQFEKIKLTMSDIHAMALESSRRTLAENALDGT--VVASDVFS 151 Query: 160 SVEGLFDVIVSNPPYIESV 178 ++E FD+IVSNPP+ + + Sbjct: 152 NIEERFDLIVSNPPFHDGI 170 >gi|165977451|ref|YP_001653044.1| 16S ribosomal RNA m2G1207 methyltransferase [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|226712984|sp|B0BU33|RSMC_ACTPJ RecName: Full=Ribosomal RNA small subunit methyltransferase C; AltName: Full=16S rRNA m2G1207 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rsmC gi|165877552|gb|ABY70600.1| putative ribosomal RNA small subunit methyltransferase C [Actinobacillus pleuropneumoniae serovar 3 str. JL03] Length = 329 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 2/79 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LDLG G G + +L ++ K DI ALE ++ N + + SD FS Sbjct: 192 KVLDLGCGAGVIGASLKQQFEKIKLTMSDIHAMALESSRHTLAENALDGT--VVASDVFS 249 Query: 160 SVEGLFDVIVSNPPYIESV 178 ++E FD+IVSNPP+ + + Sbjct: 250 NIEERFDLIVSNPPFHDGI 268 >gi|304437471|ref|ZP_07397429.1| SAM-dependent methyltransferase [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304369521|gb|EFM23188.1| SAM-dependent methyltransferase [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 245 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 30/98 (30%), Positives = 50/98 (51%), Gaps = 10/98 (10%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 +D+ L P + R+ R+LDLGTG G + L + + +D +A E+A NA Sbjct: 32 MDAVLLAHFPTLTGRE--RVLDLGTGMGIIPLLIADHAAIVTAAEID-PVQA-ELAARNA 87 Query: 142 VTNGVSERFDTLQSDW-----FSSVEGLFDVIVSNPPY 174 NG++E+ + D+ S E +D++ +NPPY Sbjct: 88 ALNGLTEKITVREGDYRDPAALFSYEA-YDIVFANPPY 124 >gi|270659705|ref|ZP_06222366.1| putative adenine-specific methylase [Haemophilus influenzae HK1212] gi|270316958|gb|EFA28641.1| putative adenine-specific methylase [Haemophilus influenzae HK1212] Length = 120 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 1/75 (1%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ILDL TG+G + +A P + +D+S AL +A+ N + + R +QS+ F Sbjct: 46 HILDLCTGSGCIAIACAYAFPNAEVDAIDLSVDALNVAEINISRHQLEHRVFPIQSNLFE 105 Query: 160 SVEGL-FDVIVSNPP 173 ++ G +D+IV+NPP Sbjct: 106 NILGQKYDLIVTNPP 120 >gi|257058606|ref|YP_003136494.1| methyltransferase type 12 [Cyanothece sp. PCC 8802] gi|256588772|gb|ACU99658.1| Methyltransferase type 12 [Cyanothece sp. PCC 8802] Length = 400 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 32/91 (35%), Positives = 48/91 (52%), Gaps = 6/91 (6%) Query: 84 SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143 +A F R R +RILD G GTG L+ +P + VG+D+S KALEIA+ + Sbjct: 41 AAYNFCTGRKPPRQNIRILDAGCGTGVGTEYLIMLNPDAEIVGIDLSEKALEIAEERSHK 100 Query: 144 NGVSER------FDTLQSDWFSSVEGLFDVI 168 +GV+ + F L + + + G FD+I Sbjct: 101 SGVASQHNAPISFHHLNLENAAQLPGQFDLI 131 >gi|190151361|ref|YP_001969886.1| ribosomal RNA small subunit methyltransferase C [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|226712983|sp|B3GZF1|RSMC_ACTP7 RecName: Full=Ribosomal RNA small subunit methyltransferase C; AltName: Full=16S rRNA m2G1207 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rsmC gi|189916492|gb|ACE62744.1| Ribosomal RNA small subunit methyltransferase C [Actinobacillus pleuropneumoniae serovar 7 str. AP76] Length = 329 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 2/79 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LDLG G G + +L ++ K DI ALE ++ N + + SD FS Sbjct: 192 KVLDLGCGAGVIGASLKQQFEKIKLTMSDIHAMALESSRRTLAENALDG--TVVASDVFS 249 Query: 160 SVEGLFDVIVSNPPYIESV 178 ++E FD+IVSNPP+ + + Sbjct: 250 NIEERFDLIVSNPPFHDGI 268 >gi|168703374|ref|ZP_02735651.1| methyltransferase small [Gemmata obscuriglobus UQM 2246] Length = 348 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 32/82 (39%), Positives = 43/82 (52%), Gaps = 15/82 (18%) Query: 101 ILDLGTGTGAV-CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-------RFDT 152 +LDLG G GAV CLA P + +D S +A+ +A+ NA NGV+ R Sbjct: 211 VLDLGCGNGAVGCLAGAMAGPDARVTFIDSSLRAIALAELNAKANGVTNTRFVNATRLQG 270 Query: 153 LQSDWFSSVEGLFDVIVSNPPY 174 L+ D FDVI++NPPY Sbjct: 271 LEEDK-------FDVILANPPY 285 >gi|325144624|gb|EGC66923.1| methyltransferase domain protein [Neisseria meningitidis M01-240013] gi|325205992|gb|ADZ01445.1| methyltransferase domain protein [Neisseria meningitidis M04-240196] Length = 367 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 35/120 (29%), Positives = 60/120 (50%), Gaps = 14/120 (11%) Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 D+GTG+G V A+L + +G D + KA+ A++N G ++ + ++D F Sbjct: 193 FDIGTGSG-VLAAILAKQGIPSVIGTDTNPKAVACARANIARLGFEKQVEIRETDLFP-- 249 Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221 EG D+IV NPP++ + +E +DP ++ L+ + A +HLN DG Sbjct: 250 EGFADLIVCNPPWLPAKPTSA--VESALYDPESAM------LAAFLRDA---PKHLNPDG 298 >gi|254670082|emb|CBA04974.1| conserved hypothetical protein [Neisseria meningitidis alpha153] Length = 367 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 35/120 (29%), Positives = 60/120 (50%), Gaps = 14/120 (11%) Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 D+GTG+G V A+L + +G D + KA+ A++N G ++ + ++D F Sbjct: 193 FDIGTGSG-VLAAILAKQGIPSVIGTDTNPKAVACARANIARLGFEKQVEIRETDLFP-- 249 Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221 EG D+IV NPP++ + +E +DP ++ L+ + A +HLN DG Sbjct: 250 EGFADLIVCNPPWLPAKPTSA--VESALYDPESAM------LAAFLRDA---PKHLNPDG 298 >gi|254428746|ref|ZP_05042453.1| Methyltransferase small domain family [Alcanivorax sp. DG881] gi|196194915|gb|EDX89874.1| Methyltransferase small domain family [Alcanivorax sp. DG881] Length = 324 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 22/75 (29%), Positives = 44/75 (58%), Gaps = 4/75 (5%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 +++D+G G G + + L ++ ++ GVD+S A+ + + NG+ R + D FS Sbjct: 189 KVIDMGCGAGVISVWLARQG--WQVQGVDVSASAVAASTDSLARNGLQGRI--MGGDLFS 244 Query: 160 SVEGLFDVIVSNPPY 174 ++G D++V+NPP+ Sbjct: 245 PIQGRVDMVVTNPPF 259 >gi|284029089|ref|YP_003379020.1| methylase [Kribbella flavida DSM 17836] gi|283808382|gb|ADB30221.1| methylase [Kribbella flavida DSM 17836] Length = 216 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 33/83 (39%), Positives = 45/83 (54%), Gaps = 5/83 (6%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R LD+ TG+G LAL +D+S +AL + NA+ +G+ R TL+ F Sbjct: 33 RALDVCTGSG--VLALTAAQCGATTTAIDVSRRALLTVRLNALRHGL--RVRTLRGQTFG 88 Query: 160 SVEG-LFDVIVSNPPYIESVIVD 181 V G FD+IVSNPPY+ S D Sbjct: 89 PVAGERFDLIVSNPPYVPSPRAD 111 >gi|15673425|ref|NP_267599.1| hypothetical protein L65498 [Lactococcus lactis subsp. lactis Il1403] gi|12724433|gb|AAK05541.1|AE006374_6 conserved hypothetical protein [Lactococcus lactis subsp. lactis Il1403] gi|326406920|gb|ADZ63991.1| ribosomal RNA small subunit methyltransferase C [Lactococcus lactis subsp. lactis CV56] Length = 200 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 31/85 (36%), Positives = 47/85 (55%), Gaps = 4/85 (4%) Query: 90 LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG-VDISCKALEIAKSNAVTNGVSE 148 L + +LD+G G G + L L K+ F GV VD++ +AL++ + NA+ N VS Sbjct: 52 LENYQPESAKSLLDVGCGYGTLGLTLAKK--FDLGVTMVDVNSRALDLCRQNAIDNAVSN 109 Query: 149 RFDTLQSDWFSSVEGLFDVIVSNPP 173 L S+ + SV +D I+SNPP Sbjct: 110 SKIEL-SNIYESVSEKYDAIISNPP 133 >gi|254671959|emb|CBA04367.1| conserved hypothetical protein [Neisseria meningitidis alpha275] Length = 367 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 35/120 (29%), Positives = 60/120 (50%), Gaps = 14/120 (11%) Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 D+GTG+G V A+L + +G D + KA+ A++N G ++ + ++D F Sbjct: 193 FDIGTGSG-VLAAILAKQGIPSVIGTDTNPKAVACARANIARLGFEKQVEIRETDLFP-- 249 Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221 EG D+IV NPP++ + +E +DP ++ L+ + A +HLN DG Sbjct: 250 EGFADLIVCNPPWLPAKPTSA--VESALYDPESAM------LAAFLRDA---PKHLNPDG 298 >gi|319410481|emb|CBY90842.1| Uncharacterized RNA methyltransferase BH0687 [Neisseria meningitidis WUE 2594] Length = 367 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 35/120 (29%), Positives = 60/120 (50%), Gaps = 14/120 (11%) Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 D+GTG+G V A+L + +G D + KA+ A++N G ++ + ++D F Sbjct: 193 FDIGTGSG-VLAAILAKQGIPSVIGTDTNPKAVACARANIARLGFEKQVEIRETDLFP-- 249 Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221 EG D+IV NPP++ + +E +DP ++ L+ + A +HLN DG Sbjct: 250 EGFADLIVCNPPWLPAKPTSA--VESALYDPESAM------LAAFLRDA---PKHLNPDG 298 >gi|258593160|emb|CBE69479.1| SAM-dependent methyltransferase [NC10 bacterium 'Dutch sediment'] Length = 266 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 6/86 (6%) Query: 96 RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155 R R+LDLG G G + L P + VG+++ + A+ NG+ R + ++ Sbjct: 53 RSTDRVLDLGCGNGVIAFLLAHRHPELRIVGLEVQPALADRARRGVHLNGLQGRIEIVEG 112 Query: 156 DWFSSVEGL-----FDVIVSNPPYIE 176 D +GL FD+++ NPPY E Sbjct: 113 D-LRQAKGLLPIAGFDMVLCNPPYRE 137 >gi|15602823|ref|NP_245895.1| 16S ribosomal RNA m2G1207 methyltransferase [Pasteurella multocida subsp. multocida str. Pm70] gi|81856739|sp|Q9CM79|RSMC_PASMU RecName: Full=Ribosomal RNA small subunit methyltransferase C; AltName: Full=16S rRNA m2G1207 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rsmC gi|12721282|gb|AAK03042.1| unknown [Pasteurella multocida subsp. multocida str. Pm70] Length = 328 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 2/79 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LDLG G G + + ++ P + DI AL ++ N + + + SD FS Sbjct: 191 KVLDLGCGAGVIGAYIKQQYPQVELTMADIHALALASSQRTLAENQLEA--EVIASDVFS 248 Query: 160 SVEGLFDVIVSNPPYIESV 178 +V G FD+I+SNPP+ + + Sbjct: 249 NVAGKFDLIISNPPFHDGI 267 >gi|296810328|ref|XP_002845502.1| S-adenosylmethionine-dependent methyltransferase [Arthroderma otae CBS 113480] gi|238842890|gb|EEQ32552.1| S-adenosylmethionine-dependent methyltransferase [Arthroderma otae CBS 113480] Length = 366 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 52/177 (29%), Positives = 78/177 (44%), Gaps = 36/177 (20%) Query: 33 RQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLP- 91 RQR L + + + + + ILG + F ++ + PRP+TE L Sbjct: 57 RQR--LRSLVRQRAAGKPLQYILGDQPFGDLEILCKEGVLIPRPDTESYTTRITQHLLAE 114 Query: 92 -RIEKRDVVRILDLGTGTGAVCL---ALLKES-PFFKGVGVDISCKALEIAKSN---AVT 143 R R VRI+D+ TGTG + L +LL S P +GVDIS AL +AK N + Sbjct: 115 HRRYPRQSVRIIDICTGTGCIPLLLHSLLAPSIPALSVIGVDISPTALSLAKKNLEHNIE 174 Query: 144 NG-----VSERFDTLQSDWFS--------SVEGL------------FDVIVSNPPYI 175 NG + +Q+D + S G+ +D+++SNPPYI Sbjct: 175 NGNLLSRARDEVHFVQADILTPRSLDPDGSELGMLLSRLQQEHRDGWDLLISNPPYI 231 >gi|163858002|ref|YP_001632300.1| putative methylase [Bordetella petrii DSM 12804] gi|163261730|emb|CAP44032.1| putative methylase [Bordetella petrii] Length = 376 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 33/104 (31%), Positives = 54/104 (51%), Gaps = 4/104 (3%) Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162 D+GTGTG V A+L + V D +AL A+ N G+ E + +Q+D F + Sbjct: 202 DIGTGTG-VLAAVLARRGVRRIVATDQDPRALACARENLARLGLHESVELMQADLFP--D 258 Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206 G D++V NPP++ + + + D D R+ L G + GL+ + Sbjct: 259 GRADLVVCNPPWLPARPSAPVEYAIYDPDSRM-LRGFLQGLAAH 301 >gi|281491999|ref|YP_003353979.1| 16S rRNA m(2)G 1207 methyltransferase [Lactococcus lactis subsp. lactis KF147] gi|281375708|gb|ADA65212.1| 16S rRNA m(2)G 1207 methyltransferase [Lactococcus lactis subsp. lactis KF147] Length = 200 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 31/85 (36%), Positives = 47/85 (55%), Gaps = 4/85 (4%) Query: 90 LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG-VDISCKALEIAKSNAVTNGVSE 148 L + +LD+G G G + L L K+ F GV VD++ +AL++ + NA+ N VS Sbjct: 52 LENYQPESAKSLLDVGCGYGTLGLTLAKK--FDLGVTMVDVNSRALDLCRQNAIDNAVSN 109 Query: 149 RFDTLQSDWFSSVEGLFDVIVSNPP 173 L S+ + SV +D I+SNPP Sbjct: 110 SKIEL-SNIYESVSEKYDAIISNPP 133 >gi|303250439|ref|ZP_07336636.1| 16S ribosomal RNA m2G1207 methyltransferase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307251480|ref|ZP_07533387.1| Ribosomal RNA small subunit methyltransferase C [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|302650427|gb|EFL80586.1| 16S ribosomal RNA m2G1207 methyltransferase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306860944|gb|EFM92950.1| Ribosomal RNA small subunit methyltransferase C [Actinobacillus pleuropneumoniae serovar 6 str. Femo] Length = 329 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 2/79 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LDLG G G + +L ++ K DI ALE ++ N + + SD FS Sbjct: 192 KVLDLGCGAGVIGASLKQQFEKIKLTMSDIHAMALESSRRTLAENALDG--TVVASDVFS 249 Query: 160 SVEGLFDVIVSNPPYIESV 178 ++E FD+IVSNPP+ + + Sbjct: 250 NIEERFDLIVSNPPFHDGI 268 >gi|300717996|ref|YP_003742799.1| S-adenosyl-L-methionine-dependent methyltransferase [Erwinia billingiae Eb661] gi|299063832|emb|CAX60952.1| putative S-adenosyl-L-methionine-dependent methyltransferase [Erwinia billingiae Eb661] Length = 277 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 16/85 (18%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI-------AKSNAVTNGVSERFDT 152 R+LD+GTG+G + L L + + G D+ A+E+ A+ NA + ++R Sbjct: 79 RVLDIGTGSGLIALMLAQRT------GQDVEVDAVELDEQAVGQARENAAESPWADRIHV 132 Query: 153 LQSD---WFSSVEGLFDVIVSNPPY 174 Q D W + E + +IVSNPPY Sbjct: 133 WQDDIVHWSKNAEQRYSLIVSNPPY 157 >gi|289422828|ref|ZP_06424661.1| methyltransferase small [Peptostreptococcus anaerobius 653-L] gi|289156738|gb|EFD05370.1| methyltransferase small [Peptostreptococcus anaerobius 653-L] Length = 249 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 31/100 (31%), Positives = 56/100 (56%), Gaps = 6/100 (6%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 +D+ L + ++++ +++DLGTGTG + + + +S K +GV+I + E+A + Sbjct: 32 IDAVLLANFSKVKRGS--KVVDLGTGTGIIPVLISGKSRADKIIGVEIQEEVAEMATRSV 89 Query: 142 VTNGVSERFDTLQSDW--FSSVEG--LFDVIVSNPPYIES 177 N + +R L D +S+ G DV+VSNPPY+ S Sbjct: 90 KLNDLEDRVIILNEDLNNITSLIGKNTVDVVVSNPPYMHS 129 >gi|303251779|ref|ZP_07337950.1| 16S ribosomal RNA m2G1207 methyltransferase [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|307249080|ref|ZP_07531087.1| Ribosomal RNA small subunit methyltransferase C [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|307251279|ref|ZP_07533199.1| Ribosomal RNA small subunit methyltransferase C [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|302649209|gb|EFL79394.1| 16S ribosomal RNA m2G1207 methyltransferase [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|306854368|gb|EFM86564.1| Ribosomal RNA small subunit methyltransferase C [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|306856677|gb|EFM88813.1| Ribosomal RNA small subunit methyltransferase C [Actinobacillus pleuropneumoniae serovar 4 str. M62] Length = 329 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 2/79 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LDLG G G + +L ++ K DI ALE ++ N + + SD FS Sbjct: 192 KVLDLGCGAGVIGASLKQQFEKIKLTMSDIHAMALESSRRTLAENALDG--TVVASDVFS 249 Query: 160 SVEGLFDVIVSNPPYIESV 178 ++E FD+IVSNPP+ + + Sbjct: 250 NIEERFDLIVSNPPFHDGI 268 >gi|282866035|ref|ZP_06275083.1| Methyltransferase type 12 [Streptomyces sp. ACTE] gi|282559074|gb|EFB64628.1| Methyltransferase type 12 [Streptomyces sp. ACTE] Length = 293 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 29/78 (37%), Positives = 38/78 (48%) Query: 90 LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 L R+ V RI+DLG GTG ALL+ P + VD S L A G++ER Sbjct: 47 LARLAGDGVTRIVDLGAGTGTGTFALLERFPAARVTAVDSSPDMLARLAGTARLRGLAER 106 Query: 150 FDTLQSDWFSSVEGLFDV 167 TL +D ++ GL D Sbjct: 107 VHTLHADADEALTGLVDT 124 >gi|317404647|gb|EFV85044.1| methyltransferase small [Achromobacter xylosoxidans C54] Length = 376 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 34/106 (32%), Positives = 56/106 (52%), Gaps = 4/106 (3%) Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162 D+GTGTG V A+L + + D+ +AL A+ N G+S++ + Q+D F E Sbjct: 203 DIGTGTG-VLAAVLARRGGKRVIATDMDPRALACARENLERLGLSKQVEVAQADLFP--E 259 Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208 G + V NPP++ + + V D D R+ L G ++GL+ + T Sbjct: 260 GRVSLAVCNPPWLPARPSSPVEHAVYDPDSRM-LRGFLNGLAAHLT 304 >gi|282865730|ref|ZP_06274780.1| methylase [Streptomyces sp. ACTE] gi|282559374|gb|EFB64926.1| methylase [Streptomyces sp. ACTE] Length = 228 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 36/118 (30%), Positives = 60/118 (50%), Gaps = 10/118 (8%) Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 RL + P+ +T LL+ ++ R E +LDLGTG+GA LAL Sbjct: 13 ARLVTLPGVYAPQHDTHLLM-----AAVNREEIGPGTDVLDLGTGSGA--LALHAAQRGA 65 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVI 179 + VD++ +A+ A+ NA+ R +SD S++ G +D+++ NPPY+ S + Sbjct: 66 RVTAVDVARRAVMTARLNALIR--RRRISVHRSDLLSALPGRSYDLVICNPPYVPSPL 121 >gi|156842993|ref|XP_001644566.1| hypothetical protein Kpol_1003p13 [Vanderwaltozyma polyspora DSM 70294] gi|156115212|gb|EDO16708.1| hypothetical protein Kpol_1003p13 [Vanderwaltozyma polyspora DSM 70294] Length = 324 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 55/240 (22%), Positives = 98/240 (40%), Gaps = 37/240 (15%) Query: 38 LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVD---SALAFSLPRIE 94 + A ++ H + IL + F ++ + PR ETE V ++ +E Sbjct: 57 IKKACIQRFHHIPLQYILKSQPFGSLNIKCQPCVLIPRWETEEWVMDLIQSIKNGKQSLE 116 Query: 95 KRDVVRILDLGTGTGAVCLALLKE-----SPFFKGVGVDISCKALEIAKSNAVTNGVSE- 148 ++ + I+DL TG+G + L L +E + VD S A+++ N + + Sbjct: 117 SKNQISIVDLCTGSGCIALLLKRELSKILNSNLNVKAVDCSDSAIDLVNRNKLESSEDPI 176 Query: 149 -----RFDTLQSDWFSSV--EGLFDVIVSNPPYI-ESVIVDCLGLEVRDFDPRISLDGGI 200 +FD LQS+ S+ D++ NPPYI +S + V+ F+P+++L G Sbjct: 177 DIEVLKFDILQSNNIDSILSNQKIDILTCNPPYIPKSDFQRDVTKSVKLFEPKLALIGDK 236 Query: 201 DGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 + Y + + H+N ++E + V KDY ND L Sbjct: 237 E---FYSNLLEKWIPHINS-----------------FVYEVGNIDQVKFVKDYISNDNTL 276 >gi|28209992|ref|NP_780936.1| methyltransferase [Clostridium tetani E88] gi|28202427|gb|AAO34873.1| methyltransferase [Clostridium tetani E88] Length = 258 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 6/97 (6%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 VD+ L + I++ D ILDL +GTG V + + F K +G++I +++AK A Sbjct: 41 VDAVLLANFANIKRND--NILDLCSGTGIVPFIISGKRKFNKILGIEIQEDMVDMAKRTA 98 Query: 142 VTNGVSERFDTLQSDWFSSV----EGLFDVIVSNPPY 174 + N + E+ + D + G FDV+ NPPY Sbjct: 99 MYNELEEKVKFILGDLKDTKLLKNLGEFDVVTVNPPY 135 >gi|299131911|ref|ZP_07025106.1| ribosomal L11 methyltransferase [Afipia sp. 1NLS2] gi|298592048|gb|EFI52248.1| ribosomal L11 methyltransferase [Afipia sp. 1NLS2] Length = 301 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 33/97 (34%), Positives = 51/97 (52%), Gaps = 14/97 (14%) Query: 80 LLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAK 138 +L+D L S PR R+LDLGTGTG + +A K + + DI +++ +AK Sbjct: 149 MLLDRVLCQSTPR-------RVLDLGTGTGVLAIAAAKA--LHRSILASDIDPRSVVVAK 199 Query: 139 SNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSN 171 NAV NGV + + + F S G FD++++N Sbjct: 200 ENAVLNGVGRDVEAIHAIGFGSPRFAETGPFDLVLAN 236 >gi|148271333|ref|YP_001220894.1| putative methyltransferase [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|147829263|emb|CAN00175.1| putative methyltransferase [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 407 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 28/90 (31%), Positives = 48/90 (53%), Gaps = 2/90 (2%) Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 +DLG GTG + A+ P + + D S A++ A++ NG+++R ++ D S+V Sbjct: 264 VDLGCGTGVIASAVALARPDLRLIATDQSWAAVDSARATVAANGLADRVTVVRDDAGSTV 323 Query: 162 -EGLFDVIVSNPPYIESVIVDCLGLEVRDF 190 +G D+++ NPP+ V GL R F Sbjct: 324 PDGSADLVLLNPPFHTGATVHA-GLAPRLF 352 >gi|229829476|ref|ZP_04455545.1| hypothetical protein GCWU000342_01566 [Shuttleworthia satelles DSM 14600] gi|229791907|gb|EEP28021.1| hypothetical protein GCWU000342_01566 [Shuttleworthia satelles DSM 14600] Length = 254 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 24/80 (30%), Positives = 44/80 (55%), Gaps = 4/80 (5%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+LDLGTGTG + + + + ++I + ++A+ +A NG+ +R + ++ D Sbjct: 52 RVLDLGTGTGVIPILMEARYGGAEYKALEIQADSCDMARRSARLNGLEDRIEIVEGDLTR 111 Query: 160 SVE----GLFDVIVSNPPYI 175 + E FDV+ NPPY+ Sbjct: 112 AHEIFGPASFDVVTCNPPYM 131 >gi|323340128|ref|ZP_08080392.1| methyltransferase domain protein [Lactobacillus ruminis ATCC 25644] gi|323092319|gb|EFZ34927.1| methyltransferase domain protein [Lactobacillus ruminis ATCC 25644] Length = 201 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 29/75 (38%), Positives = 44/75 (58%), Gaps = 2/75 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 +ILD+G G G + L+L K++P VD++ ALE+AK NA N + + +S + Sbjct: 62 KILDVGCGYGPIGLSLAKKNPDAMVEMVDVNELALELAKKNAAKNTI-KNVSIHESSIYE 120 Query: 160 SVEGL-FDVIVSNPP 173 +VE F IV+NPP Sbjct: 121 NVEETNFSTIVTNPP 135 >gi|262044984|ref|ZP_06018026.1| conserved hypothetical protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259037711|gb|EEW38940.1| conserved hypothetical protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 347 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 30/85 (35%), Positives = 47/85 (55%), Gaps = 2/85 (2%) Query: 90 LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 L +E ++LD+G G G + AL SP + D+S A+E +++ NG++ Sbjct: 194 LSTLESHTKGKVLDVGCGAGVLAAALASHSPKVRLTLCDVSAPAVEASRATLAANGLAG- 252 Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPY 174 D S+ FS V G FD+I+SNPP+ Sbjct: 253 -DVFASNVFSEVNGRFDMIISNPPF 276 >gi|322834524|ref|YP_004214551.1| rRNA (guanine-N(2)-)-methyltransferase [Rahnella sp. Y9602] gi|321169725|gb|ADW75424.1| rRNA (guanine-N(2)-)-methyltransferase [Rahnella sp. Y9602] Length = 348 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 2/79 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LD+ G G + L SP K D+S A+E +++ N + + + S+ +S Sbjct: 199 KVLDVACGAGVLASVLAMYSPKMKITLSDVSAAAIEASRATLAANDLPG--EVIASNVYS 256 Query: 160 SVEGLFDVIVSNPPYIESV 178 + G FD+I+SNPP+ E + Sbjct: 257 DIAGRFDMIISNPPFHEGL 275 >gi|297159266|gb|ADI08978.1| rRNA or tRNA methyltransferase [Streptomyces bingchenggensis BCW-1] Length = 523 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 39/135 (28%), Positives = 59/135 (43%), Gaps = 11/135 (8%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 V R LDLGTG+G L + + D + +AL IA+ +G +E D + Sbjct: 170 VARALDLGTGSGIQALHASRHAASV--TATDTNPRALHIARLTLALSGAAEP-DLREGSL 226 Query: 158 FSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216 F V + +D+IVSNPP++ S D + DGG+ G RT+ + H Sbjct: 227 FEPVADETYDLIVSNPPFVISPPSSA-------GDRLVYRDGGMSGDDLCRTLVQRSAGH 279 Query: 217 LNKDGLCSVEIGYNQ 231 L G C + + Sbjct: 280 LTDGGWCQLLANWQH 294 >gi|223932349|ref|ZP_03624352.1| methyltransferase small [Streptococcus suis 89/1591] gi|223899030|gb|EEF65388.1| methyltransferase small [Streptococcus suis 89/1591] Length = 193 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 7/75 (9%) Query: 101 ILDLGTGTGAVCLALLKESPFF--KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 +LD+G G G + L L K F K +DI+ +AL++A NA NGV + QS+ + Sbjct: 58 VLDVGCGYGPIGLTLAK---VFNTKTTLIDINSRALDLATKNAERNGVIAKI--YQSNIY 112 Query: 159 SSVEGLFDVIVSNPP 173 +V+ F+ IVSNPP Sbjct: 113 ENVDETFNHIVSNPP 127 >gi|323497775|ref|ZP_08102789.1| tRNA (adenine-N(6)-)-methyltransferase [Vibrio sinaloensis DSM 21326] gi|323317122|gb|EGA70119.1| tRNA (adenine-N(6)-)-methyltransferase [Vibrio sinaloensis DSM 21326] Length = 237 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 28/78 (35%), Positives = 40/78 (51%), Gaps = 1/78 (1%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS- 159 +LD+GTGTG + L + S +DI ALE A+SN T+ S+R + + Sbjct: 44 VLDIGTGTGLLALMCCQRSSNIAVDAIDIDRHALEAARSNFSTSPWSQRITLHKGNVLQH 103 Query: 160 SVEGLFDVIVSNPPYIES 177 + FD I+ NPPY S Sbjct: 104 PFDHCFDTIICNPPYFNS 121 >gi|310778320|ref|YP_003966653.1| methyltransferase small [Ilyobacter polytropus DSM 2926] gi|309747643|gb|ADO82305.1| methyltransferase small [Ilyobacter polytropus DSM 2926] Length = 224 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 21/77 (27%), Positives = 42/77 (54%), Gaps = 1/77 (1%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++L++GTGTG + + L K +++ + E+A+ N N + +R + + D Sbjct: 45 KLLEIGTGTGIISILLSDREEIEKITALEVQAEMAELAERNVKRNSLEKRIEVVLGDVKE 104 Query: 160 SVEG-LFDVIVSNPPYI 175 G ++D ++SNPPY+ Sbjct: 105 MKAGNVYDYVISNPPYM 121 >gi|209878063|ref|XP_002140473.1| hypothetical protein [Cryptosporidium muris RN66] gi|209556079|gb|EEA06124.1| hypothetical protein, conserved [Cryptosporidium muris RN66] Length = 243 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 52/207 (25%), Positives = 92/207 (44%), Gaps = 38/207 (18%) Query: 72 FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE----SPFFKGVGV 127 +EP +T L D+ L I K + I ++G G+G + ++LKE + + Sbjct: 16 YEPSDDTFFLEDT-LKQETEIIVKANPAIICEVGCGSGYISSSILKELNKRQIYPLTLLT 74 Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---------EGLFDVIVSNPPYIESV 178 DI+ A+ +AK N +S + + + F S G+ D+I+ NPPY Sbjct: 75 DINKSAINLAKRTITHNNISSGTEFINMELFDSFRNINRSKLNNGILDLIIFNPPY---- 130 Query: 179 IVDCLGLEVRDFDPRISLD----GGIDGL-----------SHYRTIADGV---SRHLNKD 220 V CL E+ + ++D GG++GL + ++T D V L+ Sbjct: 131 -VPCLEDELIQLRKQCNIDVAWAGGLNGLEIINRFLFGKDNLHKTKLDEVICLYNILSYG 189 Query: 221 GLCSVEI-GYNQKVDVVRIFESRKLFL 246 GLC + + G N+ +DV+ + K ++ Sbjct: 190 GLCYLLLEGRNKPIDVINLLRQNKNYI 216 >gi|88800042|ref|ZP_01115612.1| hypothetical protein MED297_16574 [Reinekea sp. MED297] gi|88777168|gb|EAR08373.1| hypothetical protein MED297_16574 [Reinekea sp. MED297] Length = 367 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 42/151 (27%), Positives = 68/151 (45%), Gaps = 28/151 (18%) Query: 73 EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCK 132 E RP+ LV + LP +K +LDLG G G + LA K P + V +D + + Sbjct: 202 ENRPDPGALVFLSYYEHLPAADK-----VLDLGCGNGILGLAYFKAHPDAQVVLIDENAQ 256 Query: 133 ALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCLGLEVRDF 190 AL+ A+ N N + T+ S+ +++ FD+I+ NPP+ + Sbjct: 257 ALKSAEQNWTLNDLPGNAITVHSNGLNALAADQQFDLILCNPPFHQDN------------ 304 Query: 191 DPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221 +L GI + + D +HL+KDG Sbjct: 305 ----TLTEGIA-----QKLFDDAKKHLSKDG 326 >gi|83955504|ref|ZP_00964135.1| hypothetical protein NAS141_19674 [Sulfitobacter sp. NAS-14.1] gi|83840148|gb|EAP79323.1| hypothetical protein NAS141_19674 [Sulfitobacter sp. NAS-14.1] Length = 391 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 31/80 (38%), Positives = 40/80 (50%), Gaps = 7/80 (8%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+LD+ G LA L V VD S ALE+A+ A GVS+RF T Q D F Sbjct: 220 RVLDVFAHVGGFSLAALANGAS-SAVAVDGSAPALELAQQGAEAMGVSDRFATRQGDAFD 278 Query: 160 SVEGL------FDVIVSNPP 173 + L FDV++ +PP Sbjct: 279 ILTALRAEGEEFDVVICDPP 298 >gi|328948386|ref|YP_004365723.1| methyltransferase type 11 [Treponema succinifaciens DSM 2489] gi|328448710|gb|AEB14426.1| Methyltransferase type 11 [Treponema succinifaciens DSM 2489] Length = 244 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 26/81 (32%), Positives = 44/81 (54%), Gaps = 4/81 (4%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 + DLGTGTG + L + +++P ++I ++ ++A+ N N + E+ +D Sbjct: 46 KACDLGTGTGIIPLLMSEKNPEANFECIEIQEESADMARRNVELNNLQEKIKIFCADIKE 105 Query: 160 SVEGL----FDVIVSNPPYIE 176 + L FD +VSNPPYIE Sbjct: 106 PFKVLQKNSFDAVVSNPPYIE 126 >gi|313159331|gb|EFR58695.1| methyltransferase domain protein [Alistipes sp. HGB5] Length = 238 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 29/77 (37%), Positives = 44/77 (57%), Gaps = 5/77 (6%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER--FDTLQSDW 157 RILD+GTGTG + L + + +P + GVD+ + + A+ NA + R F+ Sbjct: 37 RILDVGTGTGLIALMMAQRAPEARITGVDV--EEVSQARENAAASPWGGRVVFEQCPVQE 94 Query: 158 FSSVEGLFDVIVSNPPY 174 F+ E FD+IVSNPP+ Sbjct: 95 FAPDEH-FDLIVSNPPF 110 >gi|302023865|ref|ZP_07249076.1| methyltransferase [Streptococcus suis 05HAS68] Length = 196 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 7/75 (9%) Query: 101 ILDLGTGTGAVCLALLKESPFF--KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 +LD+G G G + L L K F K +DI+ +AL++A NA NGV + QS+ + Sbjct: 61 VLDVGCGYGPIGLTLAK---VFNTKTTLIDINSRALDLATKNAERNGVIAKI--YQSNIY 115 Query: 159 SSVEGLFDVIVSNPP 173 +V+ F+ IVSNPP Sbjct: 116 ENVDETFNHIVSNPP 130 >gi|291550588|emb|CBL26850.1| Predicted O-methyltransferase [Ruminococcus torques L2-14] Length = 247 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 23/79 (29%), Positives = 41/79 (51%), Gaps = 4/79 (5%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LD+GTG G + + L ++ G++I + E+A+ + N + +R + D + Sbjct: 49 VLDMGTGNGIIPVLLAGKTKGKHFTGLEIQAETAEMARRSVAHNHLEDRISIVTGDIKEA 108 Query: 161 VE----GLFDVIVSNPPYI 175 E FDVI +NPPY+ Sbjct: 109 AERFKPAFFDVITTNPPYM 127 >gi|268572659|ref|XP_002649016.1| Hypothetical protein CBG21464 [Caenorhabditis briggsae] Length = 209 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 33/121 (27%), Positives = 62/121 (51%), Gaps = 7/121 (5%) Query: 61 YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE-S 119 Y ++ + D +EP +T LL+D A+ + I R +L++G G+G V + + Sbjct: 8 YRLQAIRAHDIYEPAEDTFLLID-AIEKDIKEIRSRQPKLVLEIGCGSGVVSTFVNQALG 66 Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL---FDVIVSNPPYIE 176 V D++ AL++ A N + + D +++D F+ +E L DV++ NPPY+ Sbjct: 67 GNVTSVATDLNPHALDVTLETAKLNDI--KIDVVRTDLFAGLENLVGKVDVLLFNPPYVP 124 Query: 177 S 177 + Sbjct: 125 T 125 >gi|312114271|ref|YP_004011867.1| methyltransferase small [Rhodomicrobium vannielii ATCC 17100] gi|311219400|gb|ADP70768.1| methyltransferase small [Rhodomicrobium vannielii ATCC 17100] Length = 336 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 33/100 (33%), Positives = 54/100 (54%), Gaps = 3/100 (3%) Query: 76 PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135 P+T VD+ A+ R + V R D+ G G +A+ K P + + +D++ KA++ Sbjct: 135 PDTYKFVDAINAWLNGRAGQ--VGRAADVCAGAGPGGIAIAKACPGAEVLLLDLNPKAVD 192 Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYI 175 A NA G T+ S+ FS+ G FD++VS+PPY+ Sbjct: 193 FAAVNAAVAGRPNACATM-SNLFSNAAGSFDLVVSHPPYL 231 >gi|313204259|ref|YP_004042916.1| methyltransferase type 11 [Paludibacter propionicigenes WB4] gi|312443575|gb|ADQ79931.1| Methyltransferase type 11 [Paludibacter propionicigenes WB4] Length = 237 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 44/160 (27%), Positives = 73/160 (45%), Gaps = 16/160 (10%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS---DW 157 ILD+GTGTG + L L + S +DI A+ A+ N + + +R S ++ Sbjct: 41 ILDVGTGTGLIALMLAQRSSAMI-TAIDIDQDAVFQARENTLNSPWKDRVAVQSSSLQEF 99 Query: 158 FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217 ++ FD+IVSNPPY + +++ D + D L+H I +G + L Sbjct: 100 TANESATFDLIVSNPPYFVN--------SLKNPDKNRATARHTDSLTHEELI-NGSLKLL 150 Query: 218 NKDGLCSVEIGYNQKVDVVRIFESRKLF---LVNAFKDYG 254 + G + + N+ + V +S+ LF LV F G Sbjct: 151 SAGGRLCIILPVNEGMQCVDFAQSKGLFCSKLVKVFPKPG 190 >gi|289803616|ref|ZP_06534245.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 134 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 32/108 (29%), Positives = 47/108 (43%), Gaps = 23/108 (21%) Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173 AL SP + D+S A+E +++ NG+ + S+ FS V+G FD+I+SNPP Sbjct: 5 ALASHSPKVRLTLCDVSAPAVEASRATLAANGLEG--EVFASNVFSEVKGRFDMIISNPP 62 Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221 + DG L +T+ G RHLN G Sbjct: 63 F---------------------HDGMQTSLDAAQTLIRGAVRHLNSGG 89 >gi|332830369|gb|EGK02997.1| hypothetical protein HMPREF9455_01247 [Dysgonomonas gadei ATCC BAA-286] Length = 236 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 27/77 (35%), Positives = 39/77 (50%), Gaps = 2/77 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS--DW 157 + LD+GTGTG V L L + +DI A+E AK N + S++ +S Sbjct: 40 KALDIGTGTGLVALMLAQRKDKLHIDAIDIDHYAIEQAKENIKQSPFSDQIQAFESSLQH 99 Query: 158 FSSVEGLFDVIVSNPPY 174 F +D+IVSNPP+ Sbjct: 100 FRESRQQYDLIVSNPPF 116 >gi|146318741|ref|YP_001198453.1| 16S RNA G1207 methylase RsmC [Streptococcus suis 05ZYH33] gi|146320945|ref|YP_001200656.1| 16S RNA G1207 methylase RsmC [Streptococcus suis 98HAH33] gi|253751842|ref|YP_003024983.1| methyltransferase [Streptococcus suis SC84] gi|253753665|ref|YP_003026806.1| methyltransferase [Streptococcus suis P1/7] gi|253755454|ref|YP_003028594.1| methyltransferase [Streptococcus suis BM407] gi|145689547|gb|ABP90053.1| 16S RNA G1207 methylase RsmC [Streptococcus suis 05ZYH33] gi|145691751|gb|ABP92256.1| 16S RNA G1207 methylase RsmC [Streptococcus suis 98HAH33] gi|251816131|emb|CAZ51755.1| putative methyltransferase [Streptococcus suis SC84] gi|251817918|emb|CAZ55695.1| putative methyltransferase [Streptococcus suis BM407] gi|251819911|emb|CAR45978.1| putative methyltransferase [Streptococcus suis P1/7] gi|319758197|gb|ADV70139.1| 16S RNA G1207 methylase RsmC [Streptococcus suis JS14] Length = 196 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 29/73 (39%), Positives = 43/73 (58%), Gaps = 3/73 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LD+G G G + L L K K +DI+ +AL++A NA NGV + QS+ + + Sbjct: 61 VLDVGCGYGPIGLTLAKVFST-KTTLIDINSRALDLATKNAERNGVIAKI--YQSNIYEN 117 Query: 161 VEGLFDVIVSNPP 173 V+ F+ IVSNPP Sbjct: 118 VDETFNHIVSNPP 130 >gi|46143347|ref|ZP_00135433.2| COG2813: 16S RNA G1207 methylase RsmC [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|126209459|ref|YP_001054684.1| 16S ribosomal RNA m2G1207 methyltransferase [Actinobacillus pleuropneumoniae L20] gi|226712982|sp|A3N3U3|RSMC_ACTP2 RecName: Full=Ribosomal RNA small subunit methyltransferase C; AltName: Full=16S rRNA m2G1207 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rsmC gi|126098251|gb|ABN75079.1| Ribosomal RNA small subunit methyltransferase C [Actinobacillus pleuropneumoniae serovar 5b str. L20] Length = 329 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 2/79 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LDLG G G + +L ++ K DI ALE ++ N + + SD FS Sbjct: 192 KVLDLGCGAGVIGASLKQQFEKIKLTMSDIHAMALESSRRTFAENALDG--TVVASDVFS 249 Query: 160 SVEGLFDVIVSNPPYIESV 178 ++E FD+IVSNPP+ + + Sbjct: 250 NIEERFDLIVSNPPFHDGI 268 >gi|308160026|gb|EFO62538.1| DNA methyltransferase [Giardia lamblia P15] Length = 228 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 50/171 (29%), Positives = 76/171 (44%), Gaps = 18/171 (10%) Query: 61 YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120 Y L + P +T LL+D+ S + R V I G+G+G V + +L+ P Sbjct: 5 YEATLDDCRHVYLPDEDTFLLIDTLTELS-KELHPRSFVEI---GSGSGVVSVHILQVFP 60 Query: 121 -FFKGVGVDISCKALEIAKSNAVTNGVS------ERFDTLQSDWFSSVEGLFDVIVSNPP 173 +G VDIS A+++ + A N V F+ L + SS FD++V NPP Sbjct: 61 GILEGHAVDISPYAVDMTRRTASLNSVPLCVHEGSFFEPLNACTNSSKPARFDLVVFNPP 120 Query: 174 YIESVIVD-CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223 Y+ S D LG D ++L GG +G + + +L DG C Sbjct: 121 YVPSSEADPALG----PLD--LALAGGKNGSEVMLRFLELLPSYLAIDGHC 165 >gi|167771786|ref|ZP_02443839.1| hypothetical protein ANACOL_03158 [Anaerotruncus colihominis DSM 17241] gi|167666426|gb|EDS10556.1| hypothetical protein ANACOL_03158 [Anaerotruncus colihominis DSM 17241] Length = 206 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 36/101 (35%), Positives = 59/101 (58%), Gaps = 8/101 (7%) Query: 76 PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135 P ++VD LA RI +RD V ++D+G G+G + LALL E +KG +DI+ ALE Sbjct: 20 PIYPVIVDDILA----RIPRRDGV-LIDVGCGSGHLGLALL-ERTRYKGCLIDINQTALE 73 Query: 136 IAKSNAVTNGVSERFDTLQSDWFSS--VEGLFDVIVSNPPY 174 + +++A G+++R ++ D S +G D+I+S Y Sbjct: 74 LGRAHARERGLADRAVFMRQDVHSMDFPDGYADLIISRGSY 114 >gi|42518514|ref|NP_964444.1| hypothetical protein LJ0419 [Lactobacillus johnsonii NCC 533] gi|41582799|gb|AAS08410.1| hypothetical protein LJ_0419 [Lactobacillus johnsonii NCC 533] gi|329666784|gb|AEB92732.1| putative RNA methylase [Lactobacillus johnsonii DPC 6026] Length = 203 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 39/142 (27%), Positives = 70/142 (49%), Gaps = 12/142 (8%) Query: 34 QRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRI 93 Q +F N + +H + I D +++ T + F ++L VD + + Sbjct: 6 QMYFAANPDAKHDEHLVDYHI----DDIDLKFTTDAGVF-----SKLRVDYGSGVLIKAM 56 Query: 94 EKRDVVR--ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151 + D + ILD+GTG G + L K P + VD++ +AL++AK NA N + + + Sbjct: 57 KNVDFPKDGILDVGTGYGPMGLFAAKFWPDQEVDMVDVNERALDLAKRNAQFNRI-DNVN 115 Query: 152 TLQSDWFSSVEGLFDVIVSNPP 173 QSD + V+ + +I++NPP Sbjct: 116 IYQSDIYEQVDKKYGLIITNPP 137 >gi|318079764|ref|ZP_07987096.1| methyltransferase [Streptomyces sp. SA3_actF] Length = 115 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 31/77 (40%), Positives = 43/77 (55%), Gaps = 5/77 (6%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LDL TG+GA LALL + D+S +A+ A+ NA G +R L+ D Sbjct: 26 VLDLCTGSGA--LALLAARRGARVCATDLSWRAVVSARINAARAG--QRVRVLRGDLSGP 81 Query: 161 VEGL-FDVIVSNPPYIE 176 V G FD++VSNPPY+ Sbjct: 82 VRGQRFDLVVSNPPYVP 98 >gi|307246943|ref|ZP_07529008.1| Ribosomal RNA small subunit methyltransferase C [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307255925|ref|ZP_07537726.1| Ribosomal RNA small subunit methyltransferase C [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307260378|ref|ZP_07542085.1| Ribosomal RNA small subunit methyltransferase C [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306852228|gb|EFM84468.1| Ribosomal RNA small subunit methyltransferase C [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306861193|gb|EFM93186.1| Ribosomal RNA small subunit methyltransferase C [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306865629|gb|EFM97510.1| Ribosomal RNA small subunit methyltransferase C [Actinobacillus pleuropneumoniae serovar 11 str. 56153] Length = 329 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 2/79 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LDLG G G + +L ++ K DI ALE ++ N + + SD FS Sbjct: 192 KVLDLGCGAGVIGASLKQQFEKIKLTMSDIHAMALESSRHTLAENSLEGT--VVASDVFS 249 Query: 160 SVEGLFDVIVSNPPYIESV 178 +E FD+IVSNPP+ + + Sbjct: 250 HIEERFDLIVSNPPFHDGI 268 >gi|168179782|ref|ZP_02614446.1| type I restriction-modification system, M subunit [Clostridium botulinum NCTC 2916] gi|182669249|gb|EDT81225.1| type I restriction-modification system, M subunit [Clostridium botulinum NCTC 2916] Length = 511 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 28/95 (29%), Positives = 50/95 (52%), Gaps = 4/95 (4%) Query: 84 SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143 S + L + K+D+ + D G+G++ L + KE+ K G +++ +A+ N + Sbjct: 207 SKILAKLVTVGKKDLKSVYDPACGSGSLLLRVSKEANVRKFYGQELTSTTYNLARMNMLL 266 Query: 144 NGVS-ERFDTLQSDWFSSVEGL---FDVIVSNPPY 174 + VS ERFD D + + + FD +V+NPPY Sbjct: 267 HDVSYERFDIRNDDTLENPQHIDMKFDAVVANPPY 301 >gi|325957946|ref|YP_004289412.1| methylase [Methanobacterium sp. AL-21] gi|325329378|gb|ADZ08440.1| methylase [Methanobacterium sp. AL-21] Length = 197 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 43/164 (26%), Positives = 78/164 (47%), Gaps = 17/164 (10%) Query: 59 DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118 ++ + + + + +EP +T L ++ L R K DV L++GTGTG + + + Sbjct: 3 EYKGITIYTNEEVYEPAEDTFLFAEN---LELNR--KDDV---LEIGTGTGLIAICASQN 54 Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIES 177 S K + DI+ A++ A N +T+ + + + F V E FD+++ N PY+ + Sbjct: 55 SR--KVIATDINEAAIKCALKNVITHRAY-NVELREGNLFEPVAEEKFDLVLFNTPYLPT 111 Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221 + L ++ + DGG+DG DGV L K+G Sbjct: 112 SEEEQLEGQIN-----TAFDGGLDGRETIDAFLDGVKDVLKKEG 150 >gi|307262508|ref|ZP_07544153.1| Ribosomal RNA small subunit methyltransferase C [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|306867885|gb|EFM99716.1| Ribosomal RNA small subunit methyltransferase C [Actinobacillus pleuropneumoniae serovar 12 str. 1096] Length = 329 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 2/79 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LDLG G G + +L ++ K DI ALE ++ N + + SD FS Sbjct: 192 KVLDLGCGAGVIGASLKQQFEKIKLTMSDIHAMALESSRHTLAENSLEG--TVVASDVFS 249 Query: 160 SVEGLFDVIVSNPPYIESV 178 +E FD+IVSNPP+ + + Sbjct: 250 HIEERFDLIVSNPPFHDGI 268 >gi|163791692|ref|ZP_02186086.1| hypothetical protein CAT7_03769 [Carnobacterium sp. AT7] gi|159873040|gb|EDP67150.1| hypothetical protein CAT7_03769 [Carnobacterium sp. AT7] Length = 201 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 33/74 (44%), Positives = 43/74 (58%), Gaps = 2/74 (2%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LD+G G G + LAL K+ P K VD++ +AL +AK NA N +S SD + S Sbjct: 63 LLDVGCGYGPMGLALAKDDPERKVEMVDVNERALGLAKQNASNNRLSNVL-IHTSDIYES 121 Query: 161 VEGL-FDVIVSNPP 173 V G F IVSNPP Sbjct: 122 VVGKDFAAIVSNPP 135 >gi|294142465|ref|YP_003558443.1| methyltransferase [Shewanella violacea DSS12] gi|293328934|dbj|BAJ03665.1| methyltransferase, putative [Shewanella violacea DSS12] Length = 343 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 30/86 (34%), Positives = 42/86 (48%), Gaps = 6/86 (6%) Query: 89 SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148 +LPR++ R +LD G G G + ALLK P + VDI+ AL + N Sbjct: 197 NLPRMKGR----VLDFGCGAGVIAAALLKAQPKLQIECVDINAMALASCELTLKANNFIA 252 Query: 149 RFDTLQSDWFSSVEGLFDVIVSNPPY 174 T SD + + FD I+SNPP+ Sbjct: 253 A--TYPSDGLNQTQDKFDGIISNPPF 276 >gi|282860068|ref|ZP_06269149.1| methyltransferase small domain protein [Prevotella bivia JCVIHMP010] gi|282587156|gb|EFB92380.1| methyltransferase small domain protein [Prevotella bivia JCVIHMP010] Length = 234 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 30/80 (37%), Positives = 42/80 (52%), Gaps = 5/80 (6%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD----TLQ 154 + ILD+GTGTG + L + + P K VG+DI A++ A N + ER TLQ Sbjct: 34 LNILDIGTGTGLIALMMAQRFPNSKVVGIDIDENAIKDALYNVRNSSFIERVSIEQITLQ 93 Query: 155 SDWFSSVEGLFDVIVSNPPY 174 + + FD +V NPPY Sbjct: 94 T-YGKKHANEFDAVVCNPPY 112 >gi|322418198|ref|YP_004197421.1| type 11 methyltransferase [Geobacter sp. M18] gi|320124585|gb|ADW12145.1| Methyltransferase type 11 [Geobacter sp. M18] Length = 267 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 29/84 (34%), Positives = 43/84 (51%), Gaps = 6/84 (7%) Query: 96 RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155 R R DLGTG G + L L + + ++ +IA N NG+SER + ++ Sbjct: 51 RQGERCADLGTGCGVIALLLARLTENCSVTAIEFQQVMADIAARNVALNGLSERVEIVEE 110 Query: 156 DWFSSVEG-----LFDVIVSNPPY 174 D S++G FD++VSNPPY Sbjct: 111 DVI-SLKGHFPVDSFDLVVSNPPY 133 >gi|225387403|ref|ZP_03757167.1| hypothetical protein CLOSTASPAR_01156 [Clostridium asparagiforme DSM 15981] gi|225046448|gb|EEG56694.1| hypothetical protein CLOSTASPAR_01156 [Clostridium asparagiforme DSM 15981] Length = 184 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 25/81 (30%), Positives = 44/81 (54%), Gaps = 4/81 (4%) Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 LDLGTGTG + + L ++P G++I ++ ++A+ + N + E+ + + D + Sbjct: 65 LDLGTGTGIIPILLEAKTPGRHFTGLEIQQESADMARRSVAYNRLEEKVEIVTGDIKEAG 124 Query: 162 E----GLFDVIVSNPPYIESV 178 FDV+ SNPPY+ S Sbjct: 125 RLFKLASFDVVTSNPPYMNSA 145 >gi|291541913|emb|CBL15023.1| ribosomal protein L11 methyltransferase [Ruminococcus bromii L2-63] Length = 311 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 26/71 (36%), Positives = 42/71 (59%), Gaps = 1/71 (1%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LD+G G+G + +A L + VGVDI A+ A NA NGV++RF + + Sbjct: 174 VLDVGCGSGILGIATLLLGAD-RAVGVDIDETAVRTAAENAEINGVADRFTAICGSFTDK 232 Query: 161 VEGLFDVIVSN 171 VEG +D++++N Sbjct: 233 VEGKYDIVLAN 243 >gi|257056435|ref|YP_003134267.1| methyltransferase family protein [Saccharomonospora viridis DSM 43017] gi|256586307|gb|ACU97440.1| methyltransferase family protein [Saccharomonospora viridis DSM 43017] Length = 498 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 30/82 (36%), Positives = 42/82 (51%), Gaps = 5/82 (6%) Query: 95 KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154 +R V +LDLGTG G L K + D S +AL +A++ N + + LQ Sbjct: 156 RRPVESVLDLGTGNGVQALHASKYAQRI--TATDTSARALRLAQATFALNELD--VELLQ 211 Query: 155 SDWFSSV-EGLFDVIVSNPPYI 175 DWF+ V FD IV NPP++ Sbjct: 212 GDWFAPVARRRFDRIVCNPPFV 233 >gi|126179900|ref|YP_001047865.1| putative methylase [Methanoculleus marisnigri JR1] gi|125862694|gb|ABN57883.1| putative methylase [Methanoculleus marisnigri JR1] Length = 188 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 33/111 (29%), Positives = 56/111 (50%), Gaps = 16/111 (14%) Query: 67 LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126 L + P ++ LL+ +ALA E R R+L++GTG+G V L+ + V Sbjct: 2 LPDQVYPPAEDSFLLLRAALA------EVRATDRVLEVGTGSGYVAAGLIGRAASV--VA 53 Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIES 177 +I+ A A++ V + +++D F V G FD+I+ NPPY+ + Sbjct: 54 TEINPHAARCARARGV--------EAVRTDLFLGVSGPFDLILFNPPYLPT 96 >gi|73663523|ref|YP_302304.1| hypothetical protein SSP2214 [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|72496038|dbj|BAE19359.1| conserved hypothetical protein [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 202 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 30/97 (30%), Positives = 54/97 (55%), Gaps = 6/97 (6%) Query: 78 TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137 ++LLV + L P K+ I+D+G G G + L + K SP + VDI+ +AL ++ Sbjct: 45 SDLLVTTFLKAYPPGPTKK----IIDVGCGYGPIGLMIAKVSPHHEVTMVDINQRALSLS 100 Query: 138 KSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPP 173 + N N + + + ++S+ S VE +D +++NPP Sbjct: 101 RKNKKRNRI-DNAEIIESNGLSQVEDNTYDFVLTNPP 136 >gi|27467223|ref|NP_763860.1| hypothetical protein SE0305 [Staphylococcus epidermidis ATCC 12228] gi|57866133|ref|YP_187778.1| hypothetical protein SERP0182 [Staphylococcus epidermidis RP62A] gi|27314766|gb|AAO03902.1|AE016745_1 conserved hypothetical protein [Staphylococcus epidermidis ATCC 12228] gi|57636791|gb|AAW53579.1| conserved hypothetical protein [Staphylococcus epidermidis RP62A] Length = 202 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 33/97 (34%), Positives = 52/97 (53%), Gaps = 6/97 (6%) Query: 78 TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137 ++LL+ + L P K I D+G G G + LA+ K SP + +DI+ +AL +A Sbjct: 45 SDLLIKTFLKEHPPGPSKT----IADVGCGYGPIGLAIGKVSPHHQITMLDINNRALALA 100 Query: 138 KSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPP 173 + N N V + ++SD S+V FD I++NPP Sbjct: 101 EMNKTKNQV-DNVTIIESDCLSAVNHQCFDYILTNPP 136 >gi|328472044|gb|EGF42921.1| tRNA (adenine-N(6)-)-methyltransferase [Vibrio parahaemolyticus 10329] Length = 239 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 30/86 (34%), Positives = 39/86 (45%), Gaps = 1/86 (1%) Query: 93 IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152 +E ILD+GTGTG + L + P K VDI A+E A N + +R Sbjct: 38 MESPSPAHILDIGTGTGLLALMCAQRFPDAKITAVDIETTAVEAASHNFSHSPWHDRLSV 97 Query: 153 LQSDWFS-SVEGLFDVIVSNPPYIES 177 +D S S F IV NPPY + Sbjct: 98 KHTDVLSFSPPQRFQRIVCNPPYFNT 123 >gi|294810863|ref|ZP_06769506.1| Putative SAM-dependent methyltransferase [Streptomyces clavuligerus ATCC 27064] gi|326439500|ref|ZP_08214234.1| hypothetical protein SclaA2_00490 [Streptomyces clavuligerus ATCC 27064] gi|294323462|gb|EFG05105.1| Putative SAM-dependent methyltransferase [Streptomyces clavuligerus ATCC 27064] Length = 245 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 31/90 (34%), Positives = 40/90 (44%) Query: 67 LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126 LS P L D ++ + R R R+LDLG G+GA L L P + G Sbjct: 6 LSYRAHADHPIAAPLSDDSVRRLIDRTVHRADARVLDLGCGSGAWLLRTLSGRPGVRAEG 65 Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSD 156 VD+S AL A A GV +R D + D Sbjct: 66 VDLSATALRAADERATAAGVRDRLDLHRRD 95 >gi|325278033|ref|ZP_08143557.1| methyltransferase small [Pseudomonas sp. TJI-51] gi|324096832|gb|EGB95154.1| methyltransferase small [Pseudomonas sp. TJI-51] Length = 317 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 29/78 (37%), Positives = 39/78 (50%), Gaps = 1/78 (1%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 V +D+G GTG L + + + + VDI+ AL NA GVS SD Sbjct: 139 VEHAVDIGCGTGIGALLIARAAHHAQVSAVDINPLALRYTAVNAALAGVSN-ISVKHSDL 197 Query: 158 FSSVEGLFDVIVSNPPYI 175 V G FD+IV+NPPY+ Sbjct: 198 LDDVPGNFDLIVANPPYM 215 >gi|257055191|ref|YP_003133023.1| HemK-like methylase [Saccharomonospora viridis DSM 43017] gi|256585063|gb|ACU96196.1| HemK-related putative methylase [Saccharomonospora viridis DSM 43017] Length = 218 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 47/155 (30%), Positives = 74/155 (47%), Gaps = 26/155 (16%) Query: 72 FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131 + P+ +T+LLV++ +L R R+LD+GTGTGA+ +A ++ S VD+S Sbjct: 10 YRPQDDTDLLVEALSGLTL-----RSGDRVLDVGTGTGALAVAAVR-SGATDVTAVDVSL 63 Query: 132 KALEIAKSNAVTNGVS---ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVR 188 +AL NA + + R D + G FD++++NPPY V C G Sbjct: 64 RALAATWLNARLHRLPVRVRRADVTE----RPPHGRFDLVLANPPY-----VPCPGKG-- 112 Query: 189 DFDPRIS--LDGGIDGLSHYRTIADGVSRHLNKDG 221 R+S D G DG + + V R L++ G Sbjct: 113 ----RVSRRWDAGPDGRAVIDPLCVAVPRLLSERG 143 >gi|317503386|ref|ZP_07961430.1| metallothionein SmtA [Prevotella salivae DSM 15606] gi|315665481|gb|EFV05104.1| metallothionein SmtA [Prevotella salivae DSM 15606] Length = 231 Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust. Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 1/76 (1%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+LD+GTGTG + + + + P + V +DI +A AK N + + R + + Sbjct: 38 RLLDIGTGTGLIAMMMAQRFPEAEIVAIDIDEEACLQAKENVANSPFATRVRVMHTSLQQ 97 Query: 160 -SVEGLFDVIVSNPPY 174 E FD IVSNPP+ Sbjct: 98 YDGENCFDCIVSNPPF 113 >gi|288799851|ref|ZP_06405310.1| SAM-dependent methyltransferase [Prevotella sp. oral taxon 299 str. F0039] gi|288333099|gb|EFC71578.1| SAM-dependent methyltransferase [Prevotella sp. oral taxon 299 str. F0039] Length = 239 Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust. Identities = 29/82 (35%), Positives = 44/82 (53%), Gaps = 7/82 (8%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS---D 156 RILD+GTG+G + L + + P + V +DI A + A SN + +R + + D Sbjct: 38 RILDIGTGSGLIALMMAQRCPLAQIVALDIDEGAYKQAVSNVEGSVFCDRISVVHASLQD 97 Query: 157 WFS----SVEGLFDVIVSNPPY 174 + +EG FD IVSNPP+ Sbjct: 98 YCKVNKVGLEGSFDAIVSNPPF 119 >gi|262065982|ref|ZP_06025594.1| ribosomal RNA small subunit methyltransferase [Fusobacterium periodonticum ATCC 33693] gi|291380339|gb|EFE87857.1| ribosomal RNA small subunit methyltransferase [Fusobacterium periodonticum ATCC 33693] Length = 222 Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust. Identities = 29/98 (29%), Positives = 53/98 (54%), Gaps = 6/98 (6%) Query: 83 DSALAFSL--PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140 D+ L F+ + KR++ ++LD+GTG G + + L + + VG+DI + ++ A Sbjct: 29 DTILLFNYLNKSLSKRNI-KLLDIGTGNGVLPILLSDNAMIEEIVGIDIQNENIQRANKA 87 Query: 141 AVTNGVSE--RFDTLQSDWFSSVEGLFDVIVSNPPYIE 176 N + + F +L + + FDV++SNPPY+E Sbjct: 88 LELNKIEKNINFTSLDVKEYKNA-NYFDVVISNPPYME 124 >gi|116871639|ref|YP_848420.1| hypothetical protein lwe0219 [Listeria welshimeri serovar 6b str. SLCC5334] gi|116740517|emb|CAK19637.1| conserved hypothetical protein [Listeria welshimeri serovar 6b str. SLCC5334] Length = 201 Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust. Identities = 28/75 (37%), Positives = 43/75 (57%), Gaps = 2/75 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 +ILD+G G G + L + KE P + VD++ +ALE+AK NA N +S +S + Sbjct: 62 KILDVGCGYGPMGLTVAKEFPESQIEMVDVNLRALELAKENAELNKISNT-HIYESSVYD 120 Query: 160 SVEGL-FDVIVSNPP 173 +V + I+SNPP Sbjct: 121 NVTATDYQAIISNPP 135 >gi|307258110|ref|ZP_07539862.1| Ribosomal RNA small subunit methyltransferase C [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306863473|gb|EFM95404.1| Ribosomal RNA small subunit methyltransferase C [Actinobacillus pleuropneumoniae serovar 10 str. D13039] Length = 329 Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust. Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 2/79 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LDLG G G + +L ++ K DI ALE ++ N + + SD FS Sbjct: 192 KVLDLGCGAGVIGASLKQQFEKIKLTMSDIHAMALESSRRTLAENSLEG--TVVASDVFS 249 Query: 160 SVEGLFDVIVSNPPYIESV 178 +E FD+IVSNPP+ + + Sbjct: 250 HIEERFDLIVSNPPFHDGI 268 >gi|319949423|ref|ZP_08023485.1| putative methyltransferase [Dietzia cinnamea P4] gi|319436920|gb|EFV91978.1| putative methyltransferase [Dietzia cinnamea P4] Length = 222 Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust. Identities = 42/112 (37%), Positives = 60/112 (53%), Gaps = 19/112 (16%) Query: 72 FEPRPETELLVDSALAFSLPRIEKRDVV---RILDLGTGTGAVCL-ALLKESPFFKGVGV 127 + P+ ++ LL D+ +E DVV R+LD+ TG+G + + A LK + + V Sbjct: 16 YAPQDDSWLLCDA--------LEDCDVVAGKRVLDICTGSGILAIEAALKGA--REVVAY 65 Query: 128 DISCKALEIAKSNAVTNGVSE--RFDTLQSDWFSSVEGLFDVIVSNPPYIES 177 DIS A+ A SNA GV R TL ++ G FDV+VSNPPY+ S Sbjct: 66 DISPAAVACASSNAERAGVDVDVRLGTLADARYA---GPFDVVVSNPPYVPS 114 >gi|110834447|ref|YP_693306.1| hypothetical protein ABO_1586 [Alcanivorax borkumensis SK2] gi|123050454|sp|Q0VP64|RSMC_ALCBS RecName: Full=Ribosomal RNA small subunit methyltransferase C; AltName: Full=16S rRNA m2G1207 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rsmC gi|110647558|emb|CAL17034.1| conserved hypothetical protein [Alcanivorax borkumensis SK2] Length = 325 Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust. Identities = 22/75 (29%), Positives = 43/75 (57%), Gaps = 4/75 (5%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 +++D+G G G + + L + ++ GVD+S A+ + + NG+ R + D FS Sbjct: 189 KVIDMGCGAGVISVWLARHG--WQVQGVDVSASAVTASTESLARNGLQGRI--MGGDLFS 244 Query: 160 SVEGLFDVIVSNPPY 174 ++G D++V+NPP+ Sbjct: 245 PIQGRVDMVVTNPPF 259 >gi|292669920|ref|ZP_06603346.1| SAM-dependent methyltransferase [Selenomonas noxia ATCC 43541] gi|292648717|gb|EFF66689.1| SAM-dependent methyltransferase [Selenomonas noxia ATCC 43541] Length = 248 Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust. Identities = 30/97 (30%), Positives = 48/97 (49%), Gaps = 8/97 (8%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 +D+ L PR+ R+ ILDLGTGTG + LL + V+++ +A N Sbjct: 34 MDAVLLAHFPRLTGRE--HILDLGTGTGVI--PLLAADGAAQITAVELNPVQAALAARNV 89 Query: 142 VTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPY 174 NG+SE+ + D+ +FD++ +NPPY Sbjct: 90 QLNGLSEKITVREGDYRDPSALFACAVFDLVFANPPY 126 >gi|227888774|ref|ZP_04006579.1| methyltransferase [Lactobacillus johnsonii ATCC 33200] gi|227850611|gb|EEJ60697.1| methyltransferase [Lactobacillus johnsonii ATCC 33200] Length = 203 Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust. Identities = 39/142 (27%), Positives = 69/142 (48%), Gaps = 12/142 (8%) Query: 34 QRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRI 93 Q +F N + +H + I D +++ T + F ++L VD + + Sbjct: 6 QMYFAANPDAKHDEHLVDYHI----DDIDLKFTTDAGVF-----SKLRVDYGSGVLIKAM 56 Query: 94 EKRDVVR--ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151 + D + ILD+GTG G L K P + VD++ +AL++AK NA N + + + Sbjct: 57 KNVDFPKDGILDVGTGYGPTGLFAAKFWPDQEVDMVDVNERALDLAKRNAQFNRI-DNVN 115 Query: 152 TLQSDWFSSVEGLFDVIVSNPP 173 QSD + V+ + +I++NPP Sbjct: 116 IYQSDIYEQVDKKYGLIITNPP 137 >gi|331703060|ref|YP_004399747.1| methyltransferase [Mycoplasma mycoides subsp. capri LC str. 95010] gi|328801615|emb|CBW53768.1| Methyltransferase [Mycoplasma mycoides subsp. capri LC str. 95010] Length = 240 Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust. Identities = 27/80 (33%), Positives = 45/80 (56%), Gaps = 4/80 (5%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW-- 157 +I D GT + L L K + K +GV+I KA++IA N NG+ ++ + + +D Sbjct: 43 KICDFGTNNAVIPLILSKYTKA-KIIGVEIQNKAVKIANENIKLNGLEDQIEIIHADIKE 101 Query: 158 FSSVEGL-FDVIVSNPPYIE 176 FS + FD++V NPP+ + Sbjct: 102 FSKLHNQEFDLVVCNPPFFK 121 >gi|114327554|ref|YP_744711.1| methyltransferase [Granulibacter bethesdensis CGDNIH1] gi|114315728|gb|ABI61788.1| methyltransferase [Granulibacter bethesdensis CGDNIH1] Length = 250 Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust. Identities = 27/92 (29%), Positives = 41/92 (44%), Gaps = 6/92 (6%) Query: 93 IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152 I R R+L+ GTG GA L L P +G GV+ S +A+ N TN + R Sbjct: 39 IPARAEERVLEAGTGPGAGLLCLAHRVPGIQGTGVEKSSDIATLARQNVQTNHLENRLSI 98 Query: 153 LQSDWFSSVEGL------FDVIVSNPPYIESV 178 + D + + +D + +NPP+ E Sbjct: 99 ITQDILDFAQEMSGSPSNYDHVFANPPWHEEA 130 >gi|160881502|ref|YP_001560470.1| methyltransferase small [Clostridium phytofermentans ISDg] gi|160430168|gb|ABX43731.1| methyltransferase small [Clostridium phytofermentans ISDg] Length = 207 Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust. Identities = 30/75 (40%), Positives = 42/75 (56%), Gaps = 1/75 (1%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LDLG G G V + K + DIS KA+E++K NA N V + LQSD F + Sbjct: 44 LLDLGCGYGLVGIYASKVLSPARVTMCDISEKAVELSKKNAEYNQVLDELTILQSDGFRN 103 Query: 161 VE-GLFDVIVSNPPY 174 + + +I+SNPPY Sbjct: 104 LPVDEYSLILSNPPY 118 >gi|88860257|ref|ZP_01134895.1| hypothetical protein PTD2_14572 [Pseudoalteromonas tunicata D2] gi|88817455|gb|EAR27272.1| hypothetical protein PTD2_14572 [Pseudoalteromonas tunicata D2] Length = 230 Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust. Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 2/77 (2%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LD+G G+G + L L + SPF ++I KA AKSN + + ++ D + Sbjct: 38 VLDIGAGSGLISLMLKQRSPFISITAIEIDAKAALQAKSN-IAHSQWPDIKVIEHDILTY 96 Query: 161 VEGL-FDVIVSNPPYIE 176 FD++VSNPP+ + Sbjct: 97 TSAQPFDLVVSNPPFFQ 113 >gi|109900269|ref|YP_663524.1| methyltransferase small [Pseudoalteromonas atlantica T6c] gi|122971506|sp|Q15NR8|TRMN6_PSEA6 RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName: Full=tRNA m6A37 methyltransferase gi|109702550|gb|ABG42470.1| methyltransferase small [Pseudoalteromonas atlantica T6c] Length = 263 Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust. Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 5/93 (5%) Query: 93 IEKRDVVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFD 151 I + R LD+GTG+G + + L ++S + G+DI A+ A N + S R D Sbjct: 39 INASETQRFLDIGTGSGLLAIMLAQKSSEQTHISGIDIDKDAIGQATRNMANSPWSHRLD 98 Query: 152 TLQSDWFSSVEGL----FDVIVSNPPYIESVIV 180 Q+ S + F +I+SNPPY S I+ Sbjct: 99 AQQASVQSFTQNCDNPKFALIISNPPYFNSPIL 131 >gi|242241873|ref|ZP_04796318.1| 16S rRNA methyltransferase [Staphylococcus epidermidis W23144] gi|293367917|ref|ZP_06614555.1| methyltransferase domain protein [Staphylococcus epidermidis M23864:W2(grey)] gi|242234651|gb|EES36963.1| 16S rRNA methyltransferase [Staphylococcus epidermidis W23144] gi|291317946|gb|EFE58354.1| methyltransferase domain protein [Staphylococcus epidermidis M23864:W2(grey)] gi|329737832|gb|EGG74064.1| methyltransferase small domain protein [Staphylococcus epidermidis VCU045] Length = 244 Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust. Identities = 33/97 (34%), Positives = 52/97 (53%), Gaps = 6/97 (6%) Query: 78 TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137 ++LL+ + L P K I D+G G G + LA+ K SP + +DI+ +AL +A Sbjct: 87 SDLLIKTFLKEHPPGPSKT----IADVGCGYGPIGLAIGKVSPHHQITMLDINNRALALA 142 Query: 138 KSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPP 173 + N N V + ++SD S+V FD I++NPP Sbjct: 143 EMNKTKNQV-DNVTIIESDCLSAVNHQCFDYILTNPP 178 >gi|187926843|ref|YP_001893188.1| methyltransferase small [Ralstonia pickettii 12J] gi|241665172|ref|YP_002983531.1| methyltransferase small [Ralstonia pickettii 12D] gi|187728597|gb|ACD29761.1| methyltransferase small [Ralstonia pickettii 12J] gi|240867199|gb|ACS64859.1| methyltransferase small [Ralstonia pickettii 12D] Length = 380 Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust. Identities = 36/111 (32%), Positives = 56/111 (50%), Gaps = 5/111 (4%) Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162 D+GTGTG V A+L + V D +AL A+ N G+ + + +++D F E Sbjct: 207 DIGTGTG-VLAAVLAKRGVKHIVATDQDPRALACARDNLAHLGLQSQVEVIEADLFP--E 263 Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL-SHYRTIADG 212 G +IV NPP++ + + V D D R+ L G +DGL +H +G Sbjct: 264 GRAPLIVCNPPWLPARPSSPIERAVYDPDNRM-LRGFLDGLAAHLEPAGEG 313 >gi|118586640|ref|ZP_01544080.1| biotin carboxyl carrier protein [Oenococcus oeni ATCC BAA-1163] gi|118432955|gb|EAV39681.1| biotin carboxyl carrier protein [Oenococcus oeni ATCC BAA-1163] Length = 204 Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust. Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 2/74 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 +ILDLGTG G V ++L P + VD++ ++L +AK N N S + QS+ + Sbjct: 67 KILDLGTGYGPVGISLKVLKPDLEIDMVDVNQRSLNLAKDNLELNDFSA--NVFQSNIYE 124 Query: 160 SVEGLFDVIVSNPP 173 +V G + I+ NPP Sbjct: 125 NVAGNYAAIIVNPP 138 >gi|26989970|ref|NP_745395.1| HemK family modification methylase [Pseudomonas putida KT2440] gi|24984888|gb|AAN68859.1|AE016518_5 modification methylase, HemK family [Pseudomonas putida KT2440] Length = 316 Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust. Identities = 27/78 (34%), Positives = 39/78 (50%), Gaps = 1/78 (1%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 V +D+G G+G L + + + + VDI+ AL NA GVS SD Sbjct: 137 VEHAVDIGCGSGVGALLIARAAQHAQVSAVDINPLALRYTAINAALAGVSN-LSVEPSDL 195 Query: 158 FSSVEGLFDVIVSNPPYI 175 + G FD+IV+NPPY+ Sbjct: 196 LDGISGTFDLIVANPPYM 213 >gi|305663451|ref|YP_003859739.1| methylase [Ignisphaera aggregans DSM 17230] gi|304378020|gb|ADM27859.1| methylase [Ignisphaera aggregans DSM 17230] Length = 197 Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust. Identities = 40/153 (26%), Positives = 71/153 (46%), Gaps = 31/153 (20%) Query: 63 VRLTLSSDTFEPRPETELL------VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116 + L LS + P ++ +L +D+ L+ +L +LG+G+G V + + Sbjct: 4 IALLLSDKVYNPSDDSYILTKTISDIDNCLSIAL------------ELGSGSGYVSIYRM 51 Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYI 175 K+ + VDIS ++ + +A NG+ + D +Q D + + + D I NPPY Sbjct: 52 KKCRKSYTIMVDISPCSVRSSWESAKINGIDDLVDVIQCDAGACIRSMSIDTIYFNPPY- 110 Query: 176 ESVIVDCLGLEVRDFDP--RISLDGGIDGLSHY 206 L V +F+ IS GGIDG++ + Sbjct: 111 ---------LPVEEFNDILSISWSGGIDGITVW 134 >gi|315502631|ref|YP_004081518.1| methyltransferase small [Micromonospora sp. L5] gi|315409250|gb|ADU07367.1| methyltransferase small [Micromonospora sp. L5] Length = 489 Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust. Identities = 29/75 (38%), Positives = 44/75 (58%), Gaps = 5/75 (6%) Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 LDLGTG+G L L + + D+S +AL A + AV NG + ++ L+ D + V Sbjct: 155 LDLGTGSGVQALHLGTHA--RRVTATDVSERALRFAATTAVLNG--QDWELLRGDMVAPV 210 Query: 162 EG-LFDVIVSNPPYI 175 G FD++VSNPP++ Sbjct: 211 AGRRFDLVVSNPPFV 225 >gi|329729449|gb|EGG65852.1| methyltransferase small domain protein [Staphylococcus epidermidis VCU144] Length = 244 Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust. Identities = 33/97 (34%), Positives = 52/97 (53%), Gaps = 6/97 (6%) Query: 78 TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137 ++LL+ + L P K I D+G G G + LA+ K SP + +DI+ +AL +A Sbjct: 87 SDLLIKTFLKEHPPGPSKT----IADVGCGYGPIGLAIGKVSPHHQITMLDINNRALALA 142 Query: 138 KSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPP 173 + N N V + ++SD S+V FD I++NPP Sbjct: 143 EMNKTKNQV-DNVTIIESDCLSAVNHQCFDYILTNPP 178 >gi|148547726|ref|YP_001267828.1| methyltransferase small [Pseudomonas putida F1] gi|148511784|gb|ABQ78644.1| methyltransferase small [Pseudomonas putida F1] Length = 317 Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust. Identities = 27/78 (34%), Positives = 39/78 (50%), Gaps = 1/78 (1%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 V +D+G G+G L + + + + VDI+ AL NA GVS SD Sbjct: 138 VEHAVDIGCGSGVGALLIARAAQHAQVSAVDINPLALRYTAINAALAGVSN-LSVEPSDL 196 Query: 158 FSSVEGLFDVIVSNPPYI 175 + G FD+IV+NPPY+ Sbjct: 197 LDGISGTFDLIVANPPYM 214 >gi|85714686|ref|ZP_01045673.1| Ribosomal L11 methyltransferase [Nitrobacter sp. Nb-311A] gi|85698571|gb|EAQ36441.1| Ribosomal L11 methyltransferase [Nitrobacter sp. Nb-311A] Length = 298 Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust. Identities = 31/96 (32%), Positives = 50/96 (52%), Gaps = 12/96 (12%) Query: 80 LLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKS 139 LL+D L +PR RILDLG GTG + +A K S + DI ++ +A+ Sbjct: 146 LLLDQVLRGKMPR-------RILDLGAGTGVLAIAAAKAS-RRNVLASDIDPRSAAVARE 197 Query: 140 NAVTNGVSERFDTLQSDWFSS----VEGLFDVIVSN 171 NA +NGV ++++ FS+ FD++++N Sbjct: 198 NAASNGVGNLVQSIRATGFSAPPFRTRAPFDLVLAN 233 >gi|296159505|ref|ZP_06842329.1| methyltransferase small [Burkholderia sp. Ch1-1] gi|295890213|gb|EFG70007.1| methyltransferase small [Burkholderia sp. Ch1-1] Length = 374 Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust. Identities = 33/122 (27%), Positives = 58/122 (47%), Gaps = 14/122 (11%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 + D+GTGTG V ALL + K + D +AL A+ N G ++ + +Q+D F Sbjct: 198 KAFDIGTGTG-VLAALLAKRGVKKIIATDQDPRALACARENLTRLGYDQQVEVVQADLFP 256 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 EG ++V NPP++ + + + D + R+ L + +G++ HL+ Sbjct: 257 --EGRAPLVVCNPPWLPARPASPIEYAIYDPESRMLL-----------SFLNGLADHLSP 303 Query: 220 DG 221 G Sbjct: 304 GG 305 >gi|256422388|ref|YP_003123041.1| methyltransferase small [Chitinophaga pinensis DSM 2588] gi|256037296|gb|ACU60840.1| methyltransferase small [Chitinophaga pinensis DSM 2588] Length = 243 Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust. Identities = 29/84 (34%), Positives = 46/84 (54%), Gaps = 2/84 (2%) Query: 94 EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153 E+ V RILD+GTGTG + L L ++S G+++ A A++N + ER + Sbjct: 39 EQSPVSRILDIGTGTGLLSLMLAQQSE-AAITGIELDPAAAGQARTNFDASPWKERLQVI 97 Query: 154 QSDWFSSVEG-LFDVIVSNPPYIE 176 ++D G +D IV+NPP+ E Sbjct: 98 ETDAKQLPAGEPYDFIVTNPPFYE 121 >gi|124486387|ref|YP_001031003.1| hypothetical protein Mlab_1572 [Methanocorpusculum labreanum Z] gi|124363928|gb|ABN07736.1| putative methylase [Methanocorpusculum labreanum Z] Length = 193 Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust. Identities = 33/110 (30%), Positives = 60/110 (54%), Gaps = 15/110 (13%) Query: 68 SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 +S + P +T LL+ +A R E + R+L++GTG+GAV ++ + +P + V Sbjct: 5 TSQIYFPAEDTYLLIKAA------RTEVKQEDRVLEIGTGSGAVAKSVAEITPAV--LAV 56 Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIES 177 +I+ A + A+ NG+ + ++ D F V G FD+I+ N PY+ + Sbjct: 57 EINPHAAQYARE---VNGI----EVIRGDLFDPVCGEFDLILFNAPYLPT 99 >gi|257126774|ref|YP_003164888.1| methyltransferase small [Leptotrichia buccalis C-1013-b] gi|257050713|gb|ACV39897.1| methyltransferase small [Leptotrichia buccalis C-1013-b] Length = 209 Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust. Identities = 27/80 (33%), Positives = 44/80 (55%), Gaps = 10/80 (12%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGV---DISCKALEIAKSNAVTNGV----SERFDTL 153 +LD+G G G V + + FF+ + D++ +ALE+ K N + N +E F+ Sbjct: 66 VLDIGCGYGVVSVII---KSFFENTKIISSDVNERALELTKENLLKNNAIKNENEEFEIR 122 Query: 154 QSDWFSSVEGLFDVIVSNPP 173 +S F ++ FDVI+SNPP Sbjct: 123 KSFAFDNISEKFDVILSNPP 142 >gi|83645041|ref|YP_433476.1| 16S RNA G1207 methylase RsmC [Hahella chejuensis KCTC 2396] gi|123533712|sp|Q2SJX3|RSMC_HAHCH RecName: Full=Ribosomal RNA small subunit methyltransferase C; AltName: Full=16S rRNA m2G1207 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rsmC gi|83633084|gb|ABC29051.1| 16S RNA G1207 methylase RsmC [Hahella chejuensis KCTC 2396] Length = 342 Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust. Identities = 32/93 (34%), Positives = 44/93 (47%), Gaps = 5/93 (5%) Query: 89 SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148 SLP + R R+LD G G G + L K P DI+ AL+ A A NGV Sbjct: 197 SLPELHGR---RLLDFGCGCGVIGATLKKRYPKASVELTDINLLALKSAARTAEANGVE- 252 Query: 149 RFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181 + SD + V+ D I++NPP+ + V D Sbjct: 253 -LNVYASDGLAEVQPGVDAIITNPPFHQGVKQD 284 >gi|50365489|ref|YP_053914.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase [Mesoplasma florum L1] gi|50364045|gb|AAT76030.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase [Mesoplasma florum L1] Length = 240 Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust. Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 4/83 (4%) Query: 95 KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154 K + +I+D GT + L + K + K VGV+I KA E+A N N ++E+ + + Sbjct: 38 KSSIKKIVDFGTNNAVIPLIVSKYTNA-KIVGVEIQTKAAELAIENIELNKLTEQVEIVN 96 Query: 155 SD---WFSSVEGLFDVIVSNPPY 174 SD + + FD ++ NPP+ Sbjct: 97 SDIKTYAKEMANKFDAVICNPPF 119 >gi|313498783|gb|ADR60149.1| Methyltransferase small [Pseudomonas putida BIRD-1] Length = 317 Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust. Identities = 27/78 (34%), Positives = 39/78 (50%), Gaps = 1/78 (1%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 V +D+G G+G L + + + + VDI+ AL NA GVS SD Sbjct: 138 VEHAVDIGCGSGVGALLIARAAQHAQVSAVDINPLALRYTAINAALAGVSN-LSVEPSDL 196 Query: 158 FSSVEGLFDVIVSNPPYI 175 + G FD+IV+NPPY+ Sbjct: 197 LDGISGTFDLIVANPPYM 214 >gi|312602204|ref|YP_004022049.1| hypothetical protein RBRH_00450 [Burkholderia rhizoxinica HKI 454] gi|312169518|emb|CBW76530.1| unnamed protein product [Burkholderia rhizoxinica HKI 454] Length = 320 Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust. Identities = 42/151 (27%), Positives = 69/151 (45%), Gaps = 20/151 (13%) Query: 75 RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134 +PE +D A E + +LD+G G+G + + L VG+D++ +A Sbjct: 78 QPEQLFFMDYTCA------EDIEQASVLDIGVGSGVLSIFCLLNGAK-SCVGLDVNPRAK 130 Query: 135 EIAKSNAVTNGVSERFDTLQ---SDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDF 190 +A NA+ N + + FD + SD F+SV + FD I SNPP+ + G+E Sbjct: 131 ILAGHNAILNHIDKNFDIREGNTSDIFASVKDKQFDFICSNPPFEPTP----PGIEY--- 183 Query: 191 DPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221 ++ I G+ I + +HL DG Sbjct: 184 --YVNSAADIYGMDFVEKILSNIDQHLTDDG 212 >gi|308472428|ref|XP_003098442.1| hypothetical protein CRE_06900 [Caenorhabditis remanei] gi|308269106|gb|EFP13059.1| hypothetical protein CRE_06900 [Caenorhabditis remanei] Length = 225 Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust. Identities = 32/121 (26%), Positives = 63/121 (52%), Gaps = 7/121 (5%) Query: 61 YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE-S 119 Y ++ + D +EP +T LL+D A+ + I R+ +L++G G+G V + + Sbjct: 8 YRLQAIRAHDVYEPAEDTFLLID-AIEKDIKEIRSREPQLVLEIGCGSGVVSTFVNQALG 66 Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL---FDVIVSNPPYIE 176 + D++ AL++ A N + + D +++D F+ +E L DV++ NPPY+ Sbjct: 67 GNVTSMATDLNPHALDVTLETAKLNDI--KIDVVRTDLFAGLENLVGKVDVLLFNPPYVP 124 Query: 177 S 177 + Sbjct: 125 T 125 >gi|91772906|ref|YP_565598.1| putative methylase [Methanococcoides burtonii DSM 6242] gi|91711921|gb|ABE51848.1| N5-glutamine methyltransferase [Methanococcoides burtonii DSM 6242] Length = 202 Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust. Identities = 48/185 (25%), Positives = 83/185 (44%), Gaps = 30/185 (16%) Query: 60 FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119 + + + L + ++P ++ LL D A+ + +D + +L++G GTG V A+L+ + Sbjct: 6 YRDADIELDENVYDPAEDSYLLADVAIDVA------QDGMHVLEVGAGTGFVS-AVLQTN 58 Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179 V +IS A E AK N+V ++ F SD FD+I+ NPPY+ + Sbjct: 59 VDVDLVATEISPFAAECAKRNSVEVIRADMFGCFGSDT------KFDLILFNPPYLPTAE 112 Query: 180 VDCLGLEVRDFDPRI------SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233 D +I + DGGIDG + +L+ G+ V I + Sbjct: 113 -----------DEKIPGWLNYAFDGGIDGREAVDRFLEEFPPYLSDGGIILVLISSLTGI 161 Query: 234 DVVRI 238 D V++ Sbjct: 162 DKVKM 166 >gi|15644412|ref|NP_229464.1| hypothetical protein TM1664 [Thermotoga maritima MSB8] gi|4982239|gb|AAD36731.1|AE001808_6 conserved hypothetical protein [Thermotoga maritima MSB8] Length = 210 Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust. Identities = 34/102 (33%), Positives = 49/102 (48%), Gaps = 8/102 (7%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE--RFDTLQSDW 157 ++LDLG G G + + L KE P + DI+ +A+E AK NA + V R+ L W Sbjct: 63 KVLDLGCGYGVIGIVLKKEYPDLEVYMSDINKRAVEFAKINAKDHNVEVDIRWGNLYEPW 122 Query: 158 FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199 FD+IV NPP + V +E+ P +GG Sbjct: 123 EDM---KFDMIVCNPPIVAGKKV---WMEIVKSAPEFLEEGG 158 >gi|333027280|ref|ZP_08455344.1| putative methyltransferase [Streptomyces sp. Tu6071] gi|332747132|gb|EGJ77573.1| putative methyltransferase [Streptomyces sp. Tu6071] Length = 232 Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust. Identities = 39/117 (33%), Positives = 54/117 (46%), Gaps = 9/117 (7%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LDL TG+GA LALL + D+S +A+ A+ NA G +R L+ D Sbjct: 45 VLDLCTGSGA--LALLAARRGARVCATDLSWRAVVSARINAARAG--QRVRVLRGDLSGP 100 Query: 161 VEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216 V G FD++VSNPPY+ R ++ D G G R + D V H Sbjct: 101 VRGQRFDLVVSNPPYVPDPAARTGPRRGRSHAASLAWDAGPGG----RHLVDRVCAH 153 >gi|315655231|ref|ZP_07908132.1| 16S rRNA methyltransferase [Mobiluncus curtisii ATCC 51333] gi|315490486|gb|EFU80110.1| 16S rRNA methyltransferase [Mobiluncus curtisii ATCC 51333] Length = 214 Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust. Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 1/74 (1%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 ++D+G G G + L L E P + VD++ +ALE+ ++NA NG+ ++D F++ Sbjct: 73 LVDVGCGWGPLALTLAVERPSAQVYAVDVNTRALELTRANATANGLHNIQVLSEADAFAT 132 Query: 161 V-EGLFDVIVSNPP 173 + DVI SNPP Sbjct: 133 LGPNSVDVIWSNPP 146 >gi|167898474|ref|ZP_02485875.1| hypothetical protein Bpse7_32366 [Burkholderia pseudomallei 7894] gi|167906825|ref|ZP_02494030.1| hypothetical protein BpseN_31645 [Burkholderia pseudomallei NCTC 13177] gi|237507795|ref|ZP_04520510.1| methyltransferase family protein [Burkholderia pseudomallei MSHR346] gi|254183698|ref|ZP_04890290.1| conserved hypothetical protein [Burkholderia pseudomallei 1655] gi|254193485|ref|ZP_04899919.1| conserved domain protein [Burkholderia pseudomallei S13] gi|254301833|ref|ZP_04969276.1| conserved domain protein [Burkholderia pseudomallei 406e] gi|157811688|gb|EDO88858.1| conserved domain protein [Burkholderia pseudomallei 406e] gi|169650238|gb|EDS82931.1| conserved domain protein [Burkholderia pseudomallei S13] gi|184214231|gb|EDU11274.1| conserved hypothetical protein [Burkholderia pseudomallei 1655] gi|235000000|gb|EEP49424.1| methyltransferase family protein [Burkholderia pseudomallei MSHR346] Length = 329 Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust. Identities = 36/121 (29%), Positives = 56/121 (46%), Gaps = 13/121 (10%) Query: 71 TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130 +F P+PE +L K +I+DLG+G+G + +L + +GVGVD+S Sbjct: 139 SFYPQPERAIL-------------KLRPKKIVDLGSGSGGFLIRMLHQLDGARGVGVDLS 185 Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDF 190 A E AK A NG + R + L S V+ + ++ + V+ D L E R Sbjct: 186 ATATEQAKQAAEANGFAGRLEFLHRPIQSLVDDPAPLKGADVVHAGFVMHDLLPAEERTL 245 Query: 191 D 191 D Sbjct: 246 D 246 >gi|257466576|ref|ZP_05630887.1| methyltransferase [Fusobacterium gonidiaformans ATCC 25563] gi|315917731|ref|ZP_07913971.1| methyltransferase [Fusobacterium gonidiaformans ATCC 25563] gi|313691606|gb|EFS28441.1| methyltransferase [Fusobacterium gonidiaformans ATCC 25563] Length = 242 Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust. Identities = 34/100 (34%), Positives = 52/100 (52%), Gaps = 8/100 (8%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL-LKESPFFKGVGVDISCKALEIAKSN 140 +DS L +I K+ +ILDLGTG A+ L L LK + + G++I + ++A N Sbjct: 27 LDSLLISEFIKINKQSK-KILDLGTGNAAIPLFLSLKTTA--QIYGLEIQKVSYDLAIKN 83 Query: 141 AVTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPYIE 176 N + E+ L D + E FD++VSNPP+ E Sbjct: 84 IALNHLEEQIQILHGDMKNWQEFFPRNSFDIVVSNPPFFE 123 >gi|167915178|ref|ZP_02502269.1| hypothetical protein Bpse112_32176 [Burkholderia pseudomallei 112] Length = 329 Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust. Identities = 36/121 (29%), Positives = 56/121 (46%), Gaps = 13/121 (10%) Query: 71 TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130 +F P+PE +L K +I+DLG+G+G + +L + +GVGVD+S Sbjct: 139 SFYPQPERAIL-------------KLRPKKIVDLGSGSGGFLIRMLHQLDGARGVGVDLS 185 Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDF 190 A E AK A NG + R + L S V+ + ++ + V+ D L E R Sbjct: 186 ATATEQAKQAAEANGFAGRLEFLHRPIQSLVDDPAPLKGADVVHAGFVMHDLLPAEERTL 245 Query: 191 D 191 D Sbjct: 246 D 246 >gi|53722346|ref|YP_111331.1| hypothetical protein BPSS1321 [Burkholderia pseudomallei K96243] gi|52212760|emb|CAH38792.1| hypothetical protein BPSS1321 [Burkholderia pseudomallei K96243] Length = 366 Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust. Identities = 36/121 (29%), Positives = 56/121 (46%), Gaps = 13/121 (10%) Query: 71 TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130 +F P+PE +L K +I+DLG+G+G + +L + +GVGVD+S Sbjct: 176 SFYPQPERAIL-------------KLRPKKIVDLGSGSGGFLIRMLHQLDGARGVGVDLS 222 Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDF 190 A E AK A NG + R + L S V+ + ++ + V+ D L E R Sbjct: 223 ATATEQAKQAAEANGFAGRLEFLHRPIQSLVDDPAPLKGADVVHAGFVMHDLLPAEERTL 282 Query: 191 D 191 D Sbjct: 283 D 283 >gi|325967616|ref|YP_004243808.1| ribosomal RNA small subunit methyltransferase C [Vulcanisaeta moutnovskia 768-28] gi|323706819|gb|ADY00306.1| ribosomal RNA small subunit methyltransferase C [Vulcanisaeta moutnovskia 768-28] Length = 198 Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust. Identities = 29/74 (39%), Positives = 44/74 (59%), Gaps = 2/74 (2%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 ILD+G G G + + K +P K V VDI+ A+++ N N VS + SD +S+ Sbjct: 60 ILDMGCGYGVLGIVAAKLAPRGKVVMVDINKLAVKLTAINIKINRVSNA-EVRLSDLYSA 118 Query: 161 VEG-LFDVIVSNPP 173 V+G +F+ I+SNPP Sbjct: 119 VQGEMFNTIISNPP 132 >gi|319399710|gb|EFV87959.1| uncharacterized protein ybxB [Staphylococcus epidermidis FRI909] Length = 202 Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust. Identities = 32/97 (32%), Positives = 52/97 (53%), Gaps = 6/97 (6%) Query: 78 TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137 ++LL+ + L P K I D+G G G + LA+ K SP + +DI+ +AL +A Sbjct: 45 SDLLIKTFLKEHPPGPSKT----IADVGCGYGPIGLAIGKASPHHQITMLDINNRALALA 100 Query: 138 KSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPP 173 + N N V + ++S+ S+V FD I++NPP Sbjct: 101 EMNKTKNQV-DNVTIMESNCLSAVNHQCFDYILTNPP 136 >gi|284053249|ref|ZP_06383459.1| UbiE/COQ5 methyltransferase [Arthrospira platensis str. Paraca] Length = 220 Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust. Identities = 26/84 (30%), Positives = 47/84 (55%), Gaps = 6/84 (7%) Query: 90 LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 LPR E +LD GTGT + + + K+ P ++ +G+D+S L+I + N GVS + Sbjct: 39 LPRSEGM----VLDAGTGTARIPILIAKQKPGWQIIGIDLSENMLKIGERNIKAAGVSSQ 94 Query: 150 FD--TLQSDWFSSVEGLFDVIVSN 171 + + + ++G FD+++SN Sbjct: 95 VELALVDAKKLPYIDGQFDLVISN 118 >gi|120406733|ref|YP_956562.1| putative methylase [Mycobacterium vanbaalenii PYR-1] gi|119959551|gb|ABM16556.1| putative methylase [Mycobacterium vanbaalenii PYR-1] Length = 235 Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust. Identities = 41/139 (29%), Positives = 68/139 (48%), Gaps = 14/139 (10%) Query: 67 LSSDTFEPRPETELLVDSALAFS-LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 ++ + + P+ +++LLV++A A LP R+ DL TG+G V L + Sbjct: 19 VAVEVYPPQEDSQLLVEAATAAGVLPG------ARVADLCTGSGVVALGAAASG-AAEVT 71 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLG 184 DI KA++ + +AV G D + W +VE G +DV+++NPPY+ + D G Sbjct: 72 AFDICPKAVQRTRQDAVAAGAD--VDVHRGSWARAVEFGPYDVVLANPPYVP--VPDADG 127 Query: 185 LEV-RDFDPRISLDGGIDG 202 + P + D G DG Sbjct: 128 ETIPAAAGPSRAWDAGPDG 146 >gi|187779296|ref|ZP_02995769.1| hypothetical protein CLOSPO_02892 [Clostridium sporogenes ATCC 15579] gi|187772921|gb|EDU36723.1| hypothetical protein CLOSPO_02892 [Clostridium sporogenes ATCC 15579] Length = 529 Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust. Identities = 44/152 (28%), Positives = 70/152 (46%), Gaps = 24/152 (15%) Query: 93 IEKRD-VVRILDLGTGTGAVCLALLKESPF---FKGVGVDISCKALEIAKSNAVTNGVS- 147 +EK D + + D G+G++ L + +E P K G +++ +A+ N + +G+S Sbjct: 221 VEKSDELFNVYDPTMGSGSLLLTVGQELPKGTPMKYFGQELNTTTYNLARMNLMMHGISY 280 Query: 148 -----ERFDTLQSDWFSS--VEGL-----FDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195 DTL+SDW +G+ FD +V+NPPY D L+ DPR S Sbjct: 281 NNMVLSNADTLESDWPDGPDAKGIDHPRSFDAVVANPPYSAKWDNDETKLK----DPRFS 336 Query: 196 LDGGIDGLSH--YRTIADGVSRHLNKDGLCSV 225 G + S Y I + HLNK G ++ Sbjct: 337 EYGKLAPASKADYAFILHSI-YHLNKTGTMAI 367 >gi|77919821|ref|YP_357636.1| SAM-dependent methyltransferase [Pelobacter carbinolicus DSM 2380] gi|77545904|gb|ABA89466.1| SAM-dependent methyltransferase [Pelobacter carbinolicus DSM 2380] Length = 249 Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust. Identities = 29/81 (35%), Positives = 47/81 (58%), Gaps = 4/81 (4%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 V RI DLG G+G + L L + S + VGV+I ++ + A+ + + NGV +R + ++ D Sbjct: 48 VERICDLGCGSGVIPLILSRTSDARRIVGVEIQEESADRARRSVLLNGVQDRVEIVRRDV 107 Query: 158 FSSVEGLF----DVIVSNPPY 174 S E L V+++NPPY Sbjct: 108 RSVREVLAAESCQVVMTNPPY 128 >gi|307329693|ref|ZP_07608850.1| Methyltransferase type 12 [Streptomyces violaceusniger Tu 4113] gi|306884633|gb|EFN15662.1| Methyltransferase type 12 [Streptomyces violaceusniger Tu 4113] Length = 258 Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust. Identities = 29/75 (38%), Positives = 36/75 (48%) Query: 76 PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135 P L D ++A L R + R LDLG G GA LL P+ GVDI ALE Sbjct: 25 PIAAPLADESVARLLDRAVADEADRALDLGCGGGAWLRRLLVRYPWMHAEGVDIHTAALE 84 Query: 136 IAKSNAVTNGVSERF 150 A+ A GV++R Sbjct: 85 QAREGAEEAGVADRL 99 >gi|217419288|ref|ZP_03450795.1| conserved hypothetical protein [Burkholderia pseudomallei 576] gi|217398592|gb|EEC38607.1| conserved hypothetical protein [Burkholderia pseudomallei 576] Length = 329 Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust. Identities = 36/121 (29%), Positives = 56/121 (46%), Gaps = 13/121 (10%) Query: 71 TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130 +F P+PE +L K +I+DLG+G+G + +L + +GVGVD+S Sbjct: 139 SFYPQPERAIL-------------KLRPKKIVDLGSGSGGFLIRMLHQLDGARGVGVDLS 185 Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDF 190 A E AK A NG + R + L S V+ + ++ + V+ D L E R Sbjct: 186 ATATEQAKQAAEANGFAGRLEFLHRPIQSLVDDPAPLKGADVVHAGFVMHDLLPAEERTL 245 Query: 191 D 191 D Sbjct: 246 D 246 >gi|167828420|ref|ZP_02459891.1| hypothetical protein Bpseu9_32354 [Burkholderia pseudomallei 9] gi|167923014|ref|ZP_02510105.1| hypothetical protein BpseBC_30947 [Burkholderia pseudomallei BCC215] gi|226198487|ref|ZP_03794054.1| conserved hypothetical protein [Burkholderia pseudomallei Pakistan 9] gi|225929410|gb|EEH25430.1| conserved hypothetical protein [Burkholderia pseudomallei Pakistan 9] Length = 329 Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust. Identities = 36/121 (29%), Positives = 56/121 (46%), Gaps = 13/121 (10%) Query: 71 TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130 +F P+PE +L K +I+DLG+G+G + +L + +GVGVD+S Sbjct: 139 SFYPQPERAIL-------------KLRPKKIVDLGSGSGGFLIRMLHQLDGARGVGVDLS 185 Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDF 190 A E AK A NG + R + L S V+ + ++ + V+ D L E R Sbjct: 186 ATATEQAKQAAEANGFAGRLEFLHRPIQSLVDDPAPLKGADVVHAGFVMHDLLPAEERTL 245 Query: 191 D 191 D Sbjct: 246 D 246 >gi|159899618|ref|YP_001545865.1| rRNA (guanine-N(2)-)-methyltransferase [Herpetosiphon aurantiacus ATCC 23779] gi|159892657|gb|ABX05737.1| rRNA (guanine-N(2)-)-methyltransferase [Herpetosiphon aurantiacus ATCC 23779] Length = 365 Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust. Identities = 32/94 (34%), Positives = 48/94 (51%), Gaps = 3/94 (3%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 +D A A L + + R+LDLG G G + + L + +D + A+E K N Sbjct: 207 LDPASAMLLDAVHIQANQRVLDLGCGAGILGMFLQQRESTLALTYIDSTMVAIEATKRNL 266 Query: 142 VTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPY 174 TN ++ R L SD +V G FD++VSNPP+ Sbjct: 267 QTNQLTGR--VLASDGIQAVNGEQFDLVVSNPPF 298 >gi|312212448|emb|CBX92531.1| similar to modification methylase [Leptosphaeria maculans] Length = 340 Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust. Identities = 40/118 (33%), Positives = 61/118 (51%), Gaps = 15/118 (12%) Query: 68 SSDTFEPRPETELLVD---SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 S+D+ P+T L V SAL R + I+D+ G+GA + L ++ P + Sbjct: 124 SADSVFFGPDTYLFVPFLGSAL-----RHLSQPPTSIIDVCCGSGAGAIHLARQYPQAQV 178 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF-----DVIVSNPPYIES 177 +G+D++ ALE+ NA V+ D +QS+ F +V D+IVSNPPYI S Sbjct: 179 LGLDLNPCALELGAVNAQLADVN--VDFMQSNLFHAVPHALTSNGIDLIVSNPPYIAS 234 >gi|301058927|ref|ZP_07199896.1| methyltransferase small domain protein [delta proteobacterium NaphS2] gi|300446923|gb|EFK10719.1| methyltransferase small domain protein [delta proteobacterium NaphS2] Length = 242 Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust. Identities = 28/95 (29%), Positives = 48/95 (50%), Gaps = 4/95 (4%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 +D+ L ++ +DVV +DLGTG G + L LL P ++I + + A NA Sbjct: 41 IDAVLLSQFAAVQPQDVV--IDLGTGCGVIPLILLLTKPLGHVFALEIQPELVRQAWRNA 98 Query: 142 VTNGVSERFDTLQSDWFSS--VEGLFDVIVSNPPY 174 NG+ + D ++ D+ G ++++ NPPY Sbjct: 99 RLNGLEKMMDVVRGDFCRPPLASGSANLVICNPPY 133 >gi|226304757|ref|YP_002764715.1| methyltransferase [Rhodococcus erythropolis PR4] gi|226183872|dbj|BAH31976.1| putative methyltransferase [Rhodococcus erythropolis PR4] Length = 232 Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust. Identities = 42/111 (37%), Positives = 61/111 (54%), Gaps = 9/111 (8%) Query: 72 FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131 + P+ +T LL D AL F + R R+LDL TGTGA+ +A V VDIS Sbjct: 18 YRPQHDTSLLAD-ALLFE--HLTARS--RVLDLCTGTGALAVAASAAG-AGHVVAVDISR 71 Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181 +A A+ N + NG D+ + D +V G LFD+++SNPPY+ ++ D Sbjct: 72 RACANARLNGILNGTL--IDSRRGDLTEAVHGELFDLVISNPPYVPALADD 120 >gi|332969350|gb|EGK08375.1| methyltransferase domain protein [Kingella kingae ATCC 23330] Length = 367 Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust. Identities = 31/120 (25%), Positives = 58/120 (48%), Gaps = 14/120 (11%) Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 +D+GTG+G + + L K + D + +A+E A+ N G + R + +Q+D F+ Sbjct: 193 MDVGTGSGVLAVVLAKAG-VAQVWATDNNPRAIECARQNVARLGYAARIEIVQTDLFA-- 249 Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221 + D+IV NPP++ + +E +D R ++ + +G + HLN G Sbjct: 250 DECVDLIVCNPPWLPARPTS--AIETALYDERHAM---------LHALLNGAAAHLNAGG 298 >gi|67642262|ref|ZP_00441021.1| methyltransferase family protein [Burkholderia mallei GB8 horse 4] gi|77358785|ref|YP_338422.1| hypothetical protein BMAA0956 [Burkholderia mallei ATCC 23344] gi|66967583|gb|AAY59140.1| conserved domain protein [Burkholderia mallei ATCC 23344] gi|238523372|gb|EEP86811.1| methyltransferase family protein [Burkholderia mallei GB8 horse 4] Length = 342 Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust. Identities = 36/121 (29%), Positives = 56/121 (46%), Gaps = 13/121 (10%) Query: 71 TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130 +F P+PE +L K +I+DLG+G+G + +L + +GVGVD+S Sbjct: 139 SFYPQPERAIL-------------KLRPKKIVDLGSGSGGFLIRMLHQLDGARGVGVDLS 185 Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDF 190 A E AK A NG + R + L S V+ + ++ + V+ D L E R Sbjct: 186 ATATEQAKQAAEANGFAGRLEFLHRPIQSLVDDPAPLKGADVVHAGFVMHDLLPAEERTL 245 Query: 191 D 191 D Sbjct: 246 D 246 >gi|313886340|ref|ZP_07820065.1| methyltransferase domain protein [Porphyromonas asaccharolytica PR426713P-I] gi|312924209|gb|EFR34993.1| methyltransferase domain protein [Porphyromonas asaccharolytica PR426713P-I] Length = 244 Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust. Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 4/83 (4%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LD+GTGTG + L L + P +DI +A+ A+ N + +R L D + Sbjct: 40 QVLDVGTGTGILSLMLAQTYPSAMVTAIDIDDEAVRTAQDNFYRSPYGDRLTALSCDITA 99 Query: 160 SVEGL----FDVIVSNPPYIESV 178 L +D+I+SNPPY + + Sbjct: 100 PELALPPRTYDLIISNPPYYDGL 122 >gi|212637183|ref|YP_002313708.1| rRNA (guanine-N(2)-)-methyltransferase [Shewanella piezotolerans WP3] gi|226712999|sp|B8CUC9|RSMC_SHEPW RecName: Full=Ribosomal RNA small subunit methyltransferase C; AltName: Full=16S rRNA m2G1207 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rsmC gi|212558667|gb|ACJ31121.1| rRNA (guanine-N(2)-)-methyltransferase [Shewanella piezotolerans WP3] Length = 342 Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust. Identities = 31/97 (31%), Positives = 47/97 (48%), Gaps = 11/97 (11%) Query: 78 TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137 T+LL+++ LP+++ +LD G G G + ALL P VDI+ AL Sbjct: 191 TKLLLEN-----LPKMQGN----VLDFGCGAGVIAAALLTAQPKLTLDCVDINAMALTSC 241 Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174 NG+S + SD + G +D I+SNPP+ Sbjct: 242 DLTMQANGLSA--NIFASDGMAQTSGHYDGIISNPPF 276 >gi|261250314|ref|ZP_05942890.1| predicted O-methyltransferase [Vibrio orientalis CIP 102891] gi|260939430|gb|EEX95416.1| predicted O-methyltransferase [Vibrio orientalis CIP 102891] Length = 215 Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust. Identities = 30/97 (30%), Positives = 45/97 (46%), Gaps = 3/97 (3%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 D L S ++E +LD+GTGTG + L + + ++I AL+ A+SN Sbjct: 5 TDGVLLGSWAKLEASK--NLLDIGTGTGLLSLMCAQRNASLTIDAIEIDSNALQAAQSNF 62 Query: 142 VTNGVSERFDTLQSDWFS-SVEGLFDVIVSNPPYIES 177 + S+R D + G FD I+ NPPY S Sbjct: 63 AQSPWSDRIQLHSGDVLTRPFHGKFDTIICNPPYFNS 99 >gi|268318934|ref|YP_003292590.1| hypothetical protein FI9785_440 [Lactobacillus johnsonii FI9785] gi|262397309|emb|CAX66323.1| conserved hypothetical protein [Lactobacillus johnsonii FI9785] Length = 203 Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust. Identities = 39/142 (27%), Positives = 69/142 (48%), Gaps = 12/142 (8%) Query: 34 QRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRI 93 Q +F N + +H + I D +++ T + F ++L VD + + Sbjct: 6 QMYFAANPDAKHDEHLVDYHI----DDIDLKFTTDAGVF-----SKLRVDYGSGVLIKAM 56 Query: 94 EKRDVVR--ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151 + D + ILD+GTG G + L K P + VD++ +AL++AK NA N + + + Sbjct: 57 KNVDFPKDGILDVGTGYGPMGLFAAKFWPDQEVDMVDVNERALDLAKRNAQFNRI-DNVN 115 Query: 152 TLQSDWFSSVEGLFDVIVSNPP 173 QSD + V + +I++NPP Sbjct: 116 IYQSDIYEQVNKKYGLIITNPP 137 >gi|296108940|ref|YP_003615889.1| ribosomal L11 methyltransferase [Methanocaldococcus infernus ME] gi|295433754|gb|ADG12925.1| ribosomal L11 methyltransferase [Methanocaldococcus infernus ME] Length = 201 Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust. Identities = 39/123 (31%), Positives = 63/123 (51%), Gaps = 15/123 (12%) Query: 62 NVRLTLSSDTFEPRPETEL---LVDSALAFSLPRIEKRDVV--RILDLGTGTG--AVCLA 114 + + L S P P+ EL + +LA L + ++D + +LDLG GTG A+ Sbjct: 5 KLEMLLDSLKPHPNPKVELEQYTISGSLASELLFLAQKDFIGKTVLDLGCGTGRLAIGAK 64 Query: 115 LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFD---VIVSN 171 LL + VG+DI +++E+AK NA GV F + +D + +FD V++ N Sbjct: 65 LLGAK---RAVGIDIDRESIEVAKENAKALGVDVEF--ICNDVRNIKREMFDEEVVVIQN 119 Query: 172 PPY 174 PP+ Sbjct: 120 PPF 122 >gi|238915995|ref|YP_002929512.1| hypothetical protein EUBELI_00028 [Eubacterium eligens ATCC 27750] gi|238871355|gb|ACR71065.1| Hypothetical protein EUBELI_00028 [Eubacterium eligens ATCC 27750] Length = 239 Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust. Identities = 26/98 (26%), Positives = 51/98 (52%), Gaps = 6/98 (6%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 +D+ L + K+D R+LD+GTG G + + + ++P ++I + ++A+ N Sbjct: 27 MDAVLLSTYAMAGKKD--RVLDMGTGNGIIPVLMQSKNPGSTYSALEIQEGSAQLARRNV 84 Query: 142 VTNGVSERFDTLQSDWFSSV----EGLFDVIVSNPPYI 175 N + +R ++ D + E F+V+ SNPPY+ Sbjct: 85 ELNHLEDRISVVKGDIKEASTIFGEASFNVVTSNPPYM 122 >gi|254381772|ref|ZP_04997136.1| methyltransferase [Streptomyces sp. Mg1] gi|194340681|gb|EDX21647.1| methyltransferase [Streptomyces sp. Mg1] Length = 218 Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust. Identities = 42/135 (31%), Positives = 66/135 (48%), Gaps = 21/135 (15%) Query: 72 FEPRPETELLVDSALAFSLPRIE---KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128 + P+ +T LL ++ L R + +RDV L++GTGTGA LAL + VD Sbjct: 12 YRPQADTRLLAEA-----LTREDFGSRRDV---LEIGTGTGA--LALHAAGRGARVTAVD 61 Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEV 187 ++ A+ A+ NA+ V R L D+ + EG +D++V+NPPY+ + Sbjct: 62 VAWPAVVTARLNALRQRVPLRV--LHGDFAARTEGRRYDLVVANPPYVPAPATRPPA--- 116 Query: 188 RDFDPRISLDGGIDG 202 P + D G DG Sbjct: 117 --HGPERAWDAGPDG 129 >gi|307566089|ref|ZP_07628547.1| methyltransferase domain protein [Prevotella amnii CRIS 21A-A] gi|307345277|gb|EFN90656.1| methyltransferase domain protein [Prevotella amnii CRIS 21A-A] Length = 234 Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust. Identities = 29/78 (37%), Positives = 42/78 (53%), Gaps = 5/78 (6%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD----TLQSD 156 ILD+GTGTG + L + + P K G+DI AL+ A N ++ ++R +LQ D Sbjct: 36 ILDVGTGTGLIALMMAQRFPHSKVTGIDIDENALKDAVQNIKSSKFNDRIRIEPISLQ-D 94 Query: 157 WFSSVEGLFDVIVSNPPY 174 + FD IV NPP+ Sbjct: 95 LCKTQNNTFDAIVCNPPF 112 >gi|304398628|ref|ZP_07380500.1| methyltransferase small [Pantoea sp. aB] gi|304353839|gb|EFM18214.1| methyltransferase small [Pantoea sp. aB] Length = 249 Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust. Identities = 27/81 (33%), Positives = 42/81 (51%), Gaps = 4/81 (4%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 V RILD+G+G+G + L L + +P + V++ +A A+ N + ER Q D Sbjct: 49 VRRILDIGSGSGLIALMLAQRTPSPVEIDAVELEPEAAGQAQENVQQSPWPERIRVHQQD 108 Query: 157 ---WFSSVEGLFDVIVSNPPY 174 W + + +IVSNPPY Sbjct: 109 IAGWAEQCDKRYSLIVSNPPY 129 >gi|302851831|ref|XP_002957438.1| hypothetical protein VOLCADRAFT_98562 [Volvox carteri f. nagariensis] gi|300257242|gb|EFJ41493.1| hypothetical protein VOLCADRAFT_98562 [Volvox carteri f. nagariensis] Length = 451 Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust. Identities = 53/202 (26%), Positives = 86/202 (42%), Gaps = 29/202 (14%) Query: 60 FYNVRLTLSSDTFEPRPETEL---LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116 ++ L++ PRPETE+ LV +A++ P + DLGTG+GA+ +A Sbjct: 187 WHKYVLSVGPGVLVPRPETEIFPELVRTAIS-ERPYLA---AAPWADLGTGSGAIAIAAA 242 Query: 117 KE----SPFFKGVGVDISCKALEIAKSNA--------------VTNGVSERFDTLQSDWF 158 E + + VD+S +A+ A NA G +Q WF Sbjct: 243 DELRRVTLSVEVWAVDLSPRAVAYATFNAQLCLPSPPSTGAGGSGGGGRPLVRVVQGSWF 302 Query: 159 SSVE---GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI-DGLSHYRTIADGVS 214 + G +++NPPYI + L EVR +PR +LDGG GL + + Sbjct: 303 EPLRHLRGRLGGVLTNPPYIPRAQMSGLQAEVRLHEPRGALDGGEGPGLDSLEILCSDAA 362 Query: 215 RHLNKDGLCSVEIGYNQKVDVV 236 + GL ++E + ++V Sbjct: 363 AMMLPGGLIALETAGGDQAELV 384 >gi|291570492|dbj|BAI92764.1| hypothetical protein [Arthrospira platensis NIES-39] Length = 220 Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust. Identities = 26/84 (30%), Positives = 47/84 (55%), Gaps = 6/84 (7%) Query: 90 LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 LPR E +LD GTGT + + + K+ P ++ +G+D+S L+I + N GVS + Sbjct: 39 LPRSEGM----VLDAGTGTARIPILIAKQKPGWQIIGIDLSENMLKIGERNIKAAGVSSQ 94 Query: 150 FD--TLQSDWFSSVEGLFDVIVSN 171 + + + ++G FD+++SN Sbjct: 95 VELALVDAKKLPYIDGQFDLVISN 118 >gi|149197630|ref|ZP_01874680.1| hypothetical protein LNTAR_20393 [Lentisphaera araneosa HTCC2155] gi|149139200|gb|EDM27603.1| hypothetical protein LNTAR_20393 [Lentisphaera araneosa HTCC2155] Length = 378 Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust. Identities = 33/80 (41%), Positives = 43/80 (53%), Gaps = 8/80 (10%) Query: 101 ILDLGTGTGAVCLALLKES----PFFKG--VGVDISCKALEIAKSNAVTNGVSERFDTLQ 154 ILDLG G G + LAL K P G V VD + +++E K N NG E + + Sbjct: 241 ILDLGCGAGLIGLALAKRQNDAKPDHGGSVVLVDSNIRSIECCKKNIEINGF-ENCEAIA 299 Query: 155 SDWFSSVEGLFDVIVSNPPY 174 SD + + E FD+IV NPPY Sbjct: 300 SDLYET-EKTFDLIVGNPPY 318 >gi|149202963|ref|ZP_01879934.1| methyltransferase small [Roseovarius sp. TM1035] gi|149143509|gb|EDM31545.1| methyltransferase small [Roseovarius sp. TM1035] Length = 235 Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust. Identities = 30/93 (32%), Positives = 49/93 (52%), Gaps = 5/93 (5%) Query: 86 LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145 LA S+P R +LDLG G+G L + P G++I +A+ N+ +NG Sbjct: 17 LAASVP---ARAGQSLLDLGCGSGIAALCVASRVPGVTLAGLEIQAAYAALARQNSASNG 73 Query: 146 VS-ERFDTLQSDWFSSV-EGLFDVIVSNPPYIE 176 ++ E F+ +D +S+ FD +++NPPY E Sbjct: 74 IALEVFEGDIADMPASLRRRQFDHVIANPPYFE 106 >gi|121597486|ref|YP_990033.1| hypothetical protein BMASAVP1_0423 [Burkholderia mallei SAVP1] gi|124381215|ref|YP_001024046.1| hypothetical protein BMA10229_0221 [Burkholderia mallei NCTC 10229] gi|126446817|ref|YP_001078565.1| hypothetical protein BMA10247_A1380 [Burkholderia mallei NCTC 10247] gi|126457825|ref|YP_001075825.1| hypothetical protein BURPS1106A_A1791 [Burkholderia pseudomallei 1106a] gi|166999597|ref|ZP_02265434.1| conserved hypothetical protein [Burkholderia mallei PRL-20] gi|167723893|ref|ZP_02407129.1| hypothetical protein BpseD_33055 [Burkholderia pseudomallei DM98] gi|167820039|ref|ZP_02451719.1| hypothetical protein Bpse9_33232 [Burkholderia pseudomallei 91] gi|167849873|ref|ZP_02475381.1| hypothetical protein BpseB_31800 [Burkholderia pseudomallei B7210] gi|254191177|ref|ZP_04897682.1| conserved domain protein [Burkholderia pseudomallei Pasteur 52237] gi|254262545|ref|ZP_04953410.1| conserved domain protein [Burkholderia pseudomallei 1710a] gi|254356686|ref|ZP_04972961.1| conserved hypothetical protein [Burkholderia mallei 2002721280] gi|121225284|gb|ABM48815.1| conserved domain protein [Burkholderia mallei SAVP1] gi|124289235|gb|ABM98504.1| conserved domain protein [Burkholderia mallei NCTC 10229] gi|126231593|gb|ABN95006.1| conserved hypothetical protein [Burkholderia pseudomallei 1106a] gi|126239671|gb|ABO02783.1| conserved domain protein [Burkholderia mallei NCTC 10247] gi|148025713|gb|EDK83836.1| conserved hypothetical protein [Burkholderia mallei 2002721280] gi|157938850|gb|EDO94520.1| conserved domain protein [Burkholderia pseudomallei Pasteur 52237] gi|243064426|gb|EES46612.1| conserved hypothetical protein [Burkholderia mallei PRL-20] gi|254213547|gb|EET02932.1| conserved domain protein [Burkholderia pseudomallei 1710a] Length = 329 Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust. Identities = 36/121 (29%), Positives = 56/121 (46%), Gaps = 13/121 (10%) Query: 71 TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130 +F P+PE +L K +I+DLG+G+G + +L + +GVGVD+S Sbjct: 139 SFYPQPERAIL-------------KLRPKKIVDLGSGSGGFLIRMLHQLDGARGVGVDLS 185 Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDF 190 A E AK A NG + R + L S V+ + ++ + V+ D L E R Sbjct: 186 ATATEQAKQAAEANGFAGRLEFLHRPIQSLVDDPAPLKGADVVHAGFVMHDLLPAEERTL 245 Query: 191 D 191 D Sbjct: 246 D 246 >gi|296313663|ref|ZP_06863604.1| methyltransferase domain protein [Neisseria polysaccharea ATCC 43768] gi|296839805|gb|EFH23743.1| methyltransferase domain protein [Neisseria polysaccharea ATCC 43768] Length = 367 Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust. Identities = 34/120 (28%), Positives = 60/120 (50%), Gaps = 14/120 (11%) Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 D+GTG+G V A+L + +G D + +A+ A++N G ++ + ++D F Sbjct: 193 FDIGTGSG-VLAAILAKQGIPSVIGTDTNPRAVACARANIARLGFEKQVEICETDLFP-- 249 Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221 EG D+IV NPP++ + +E +DP ++ L+ + A +HLN DG Sbjct: 250 EGFADLIVCNPPWLPAKPTSA--VESALYDPESAM------LAAFLRDA---PKHLNPDG 298 >gi|227488744|ref|ZP_03919060.1| methyltransferase small [Corynebacterium glucuronolyticum ATCC 51867] gi|227542260|ref|ZP_03972309.1| methyltransferase [Corynebacterium glucuronolyticum ATCC 51866] gi|227091166|gb|EEI26478.1| methyltransferase small [Corynebacterium glucuronolyticum ATCC 51867] gi|227182089|gb|EEI63061.1| methyltransferase [Corynebacterium glucuronolyticum ATCC 51866] Length = 525 Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust. Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 7/84 (8%) Query: 93 IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152 I V R+LDLGTG G + L+ + + G DIS +AL++A+ G Sbjct: 168 IPTTPVARVLDLGTGAGTLLLSQVGHARELW--GTDISQRALDLAELTLAGAGAH----L 221 Query: 153 LQSDWFSSVEG-LFDVIVSNPPYI 175 ++ WF +E FD I++NPP++ Sbjct: 222 VKGSWFEPIENERFDRIIANPPFV 245 >gi|146278503|ref|YP_001168662.1| methyltransferase small [Rhodobacter sphaeroides ATCC 17025] gi|145556744|gb|ABP71357.1| methyltransferase small [Rhodobacter sphaeroides ATCC 17025] Length = 271 Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust. Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 5/88 (5%) Query: 93 IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152 + R +L+LG G G L L P + G+++ E+A+ NA NGVS + Sbjct: 57 VPARPGQSVLELGCGAGVASLCLAARVPGLRLAGLEVQPAYAELARVNAARNGVS--LEV 114 Query: 153 LQSDWFSSVEGL---FDVIVSNPPYIES 177 ++ D + L FD +++NPPY + Sbjct: 115 VEGDLAAMPPVLRRSFDHVIANPPYYPA 142 >gi|317153229|ref|YP_004121277.1| ribosomal L11 methyltransferase [Desulfovibrio aespoeensis Aspo-2] gi|316943480|gb|ADU62531.1| ribosomal L11 methyltransferase [Desulfovibrio aespoeensis Aspo-2] Length = 291 Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust. Identities = 40/151 (26%), Positives = 71/151 (47%), Gaps = 28/151 (18%) Query: 47 KHESIHRILGWRDFYNV-----RLTLSSDTFEPRPE---TELLVDSALAF---------- 88 + ES + + W+DF+N T+ E E T ++++ +AF Sbjct: 72 ERESENWAMAWKDFFNPVNCGETFTILPPWLEDGSENGTTHIVIEPKMAFGTGHHSTTSL 131 Query: 89 ---SLPRIEKRDVVR----ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 ++ + K V+ LDLGTG+G + + L K G+G+DI +A+E A+ NA Sbjct: 132 CLATIGTMAKDGVIEPGQSFLDLGTGSGILGIGLCKLG--LTGIGLDIDPQAIECARENA 189 Query: 142 VTNGVSERFD-TLQSDWFSSVEGLFDVIVSN 171 N V++ + S F E +F+++V+N Sbjct: 190 EANAVAQSMRCAVGSIDFLEPEAVFNIVVAN 220 >gi|255319320|ref|ZP_05360537.1| modification methylase, HemK family [Acinetobacter radioresistens SK82] gi|262379764|ref|ZP_06072920.1| modification methylase [Acinetobacter radioresistens SH164] gi|255303713|gb|EET82913.1| modification methylase, HemK family [Acinetobacter radioresistens SK82] gi|262299221|gb|EEY87134.1| modification methylase [Acinetobacter radioresistens SH164] Length = 319 Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust. Identities = 25/85 (29%), Positives = 51/85 (60%), Gaps = 2/85 (2%) Query: 92 RIEKRDVVRILDLGTGTGAVCLALLKE-SPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150 + ++ V IL++G+GT A + K+ +P + VDI+ AL +++ +A +G+ E+F Sbjct: 131 KQQQFSVSSILEMGSGTAATAILTTKKFNPQPELTLVDINPYALLLSELHAEFSGI-EKF 189 Query: 151 DTLQSDWFSSVEGLFDVIVSNPPYI 175 + S + + +D+I++NPPY+ Sbjct: 190 RAVNSHLYQEIHEQYDLIIANPPYL 214 >gi|332982765|ref|YP_004464206.1| RNA methylase [Mahella australiensis 50-1 BON] gi|332700443|gb|AEE97384.1| RNA methylase [Mahella australiensis 50-1 BON] Length = 252 Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust. Identities = 29/97 (29%), Positives = 52/97 (53%), Gaps = 6/97 (6%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 +D+ L + RI+ D+V DLGTG+G + L L ++ K G++I + ++A+ + Sbjct: 32 IDAVLLANFARIKPGDIV--ADLGTGSGVIPLLLSCKTAASKIYGLEIQHEMADMAQRSV 89 Query: 142 VTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPY 174 N + R D ++ D + + L D ++SNPPY Sbjct: 90 RLNDLESRVDIIEGDIRKAGDIIGMSLVDAVISNPPY 126 >gi|167742867|ref|ZP_02415641.1| hypothetical protein Bpse14_32632 [Burkholderia pseudomallei 14] Length = 329 Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust. Identities = 36/121 (29%), Positives = 56/121 (46%), Gaps = 13/121 (10%) Query: 71 TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130 +F P+PE +L K +I+DLG+G+G + +L + +GVGVD+S Sbjct: 139 SFYPQPERAIL-------------KLRPKKIVDLGSGSGGFLIRMLHQLDGARGVGVDLS 185 Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDF 190 A E AK A NG + R + L S V+ + ++ + V+ D L E R Sbjct: 186 ATATEQAKQAAEANGFAGRLEFLHRPIQSLVDDPAPLKGADVVHAGFVMHDLLPAEERTL 245 Query: 191 D 191 D Sbjct: 246 D 246 >gi|149909422|ref|ZP_01898077.1| 16S RNA G1207 methylase RsmC [Moritella sp. PE36] gi|149807532|gb|EDM67481.1| 16S RNA G1207 methylase RsmC [Moritella sp. PE36] Length = 344 Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust. Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 2/93 (2%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 +D+ L + K+ R+LDLG G G + + K P K D+S A++ ++ Sbjct: 189 LDTGSKILLNNLHKKPSGRVLDLGCGAGIIGSYIAKRFPASKVEMTDVSALAVKSSQLTL 248 Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174 N ++ + SD +S + G FD I+SNPP+ Sbjct: 249 AANELAGQ--AYLSDVYSDISGKFDYIISNPPF 279 >gi|33151458|ref|NP_872811.1| 16S ribosomal RNA m2G1207 methyltransferase [Haemophilus ducreyi 35000HP] gi|81423896|sp|Q7VP87|RSMC_HAEDU RecName: Full=Ribosomal RNA small subunit methyltransferase C; AltName: Full=16S rRNA m2G1207 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rsmC gi|33147678|gb|AAP95200.1| putative ribosomal RNA small subunit methyltransferase C [Haemophilus ducreyi 35000HP] Length = 329 Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust. Identities = 32/97 (32%), Positives = 45/97 (46%), Gaps = 2/97 (2%) Query: 78 TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137 TEL S L S + R +LDLG G G + L + P DI A+ A Sbjct: 170 TELDAGSQLLLSSFTNQDRLTGNVLDLGCGAGVIGAYLKQRFPAISLTMSDIHSMAIHSA 229 Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174 ++ N ++ + SD FS + FD+IVSNPP+ Sbjct: 230 QATLAKNKLTG--TVIASDVFSHINDRFDLIVSNPPF 264 >gi|302669461|ref|YP_003829421.1| SAM-dependent methyltransferase [Butyrivibrio proteoclasticus B316] gi|302393934|gb|ADL32839.1| SAM-dependent methyltransferase [Butyrivibrio proteoclasticus B316] Length = 214 Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust. Identities = 25/80 (31%), Positives = 44/80 (55%), Gaps = 4/80 (5%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R LDLGTGTG + + + ++ + +G++I + E+A + + N + R +Q D Sbjct: 17 RCLDLGTGTGIIPILMAAKTNARELIGLEIQEASAEMANRSVLLNDLEARVKIVQGDIKE 76 Query: 160 SVE----GLFDVIVSNPPYI 175 + + FDV+ SNPPY+ Sbjct: 77 ADQLFEAASFDVVTSNPPYM 96 >gi|255023945|ref|ZP_05295931.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Listeria monocytogenes FSL J1-208] Length = 141 Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust. Identities = 31/102 (30%), Positives = 46/102 (45%), Gaps = 4/102 (3%) Query: 16 GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75 GLS ++ + + L+ R L E + IL FY ++ D PR Sbjct: 34 GLSRSELWTEINRELEPNHEKQFEEDFARYLAGEPVQYILKTAPFYGYDFLVTEDVLIPR 93 Query: 76 PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117 PETE LV A F ++K V +LD+ TG+G + +A K Sbjct: 94 PETEELVACAEDF----LKKHPVKNVLDVCTGSGIIAIAXQK 131 >gi|307594946|ref|YP_003901263.1| methyltransferase [Vulcanisaeta distributa DSM 14429] gi|307550147|gb|ADN50212.1| methyltransferase small [Vulcanisaeta distributa DSM 14429] Length = 199 Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust. Identities = 34/119 (28%), Positives = 57/119 (47%), Gaps = 7/119 (5%) Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 +R+ + S+ + P E L + + +RI+D+G+GTG + LA L+E Sbjct: 1 MRIKVLSNIYPP-AEDSWQTAELLRWVVSNYIGNKALRIIDVGSGTGILTLAALEEVVSR 59 Query: 123 KGVG----VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF--DVIVSNPPYI 175 G +D A + N V NG+ + D + ++ V+ F D+IVSNPPY+ Sbjct: 60 GGTAWVLSIDHDINASVSTRMNLVDNGLYQYADVVTANLLDPVKAEFHVDIIVSNPPYL 118 >gi|311278492|ref|YP_003940723.1| methyltransferase small [Enterobacter cloacae SCF1] gi|308747687|gb|ADO47439.1| methyltransferase small [Enterobacter cloacae SCF1] Length = 245 Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust. Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 5/89 (5%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 V RILD+GTG+G + L L + + + V++ A A N + ++R Q+D Sbjct: 45 VNRILDIGTGSGLLALMLAQRTEASVTLDAVELDVDAAAQAAENVQESPWAQRIAVHQAD 104 Query: 157 ---WFSSVEGLFDVIVSNPPYIESVIVDC 182 W + +D+IVSNPPY E V+C Sbjct: 105 VRDWIAGQNSRYDLIVSNPPYYEQG-VEC 132 >gi|76818669|ref|YP_335500.1| hypothetical protein BURPS1710b_A0341 [Burkholderia pseudomallei 1710b] gi|76583142|gb|ABA52616.1| hypothetical protein BURPS1710b_A0341 [Burkholderia pseudomallei 1710b] Length = 414 Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust. Identities = 36/121 (29%), Positives = 56/121 (46%), Gaps = 13/121 (10%) Query: 71 TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130 +F P+PE +L K +I+DLG+G+G + +L + +GVGVD+S Sbjct: 224 SFYPQPERAIL-------------KLRPKKIVDLGSGSGGFLIRMLHQLDGARGVGVDLS 270 Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDF 190 A E AK A NG + R + L S V+ + ++ + V+ D L E R Sbjct: 271 ATATEQAKQAAEANGFAGRLEFLHRPIQSLVDDPAPLKGADVVHAGFVMHDLLPAEERTL 330 Query: 191 D 191 D Sbjct: 331 D 331 >gi|38605120|sp|O86951|PRMA_THENE RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11 Mtase Length = 264 Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust. Identities = 27/72 (37%), Positives = 42/72 (58%), Gaps = 3/72 (4%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R++D+G GTG + + K + + VD+ +A+E+AK N N V +SD S Sbjct: 132 RVVDVGCGTGILAIVAKKLGASY-VLAVDVDEQAVEVAKENVQKNSVD--VTVKRSDLLS 188 Query: 160 SVEGLFDVIVSN 171 VEG+FD++VSN Sbjct: 189 EVEGVFDLVVSN 200 >gi|320006881|gb|ADW01731.1| methylase [Streptomyces flavogriseus ATCC 33331] Length = 227 Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust. Identities = 28/80 (35%), Positives = 47/80 (58%), Gaps = 5/80 (6%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LD+GTG+GA LAL + VDI+ +A+ A+ NA+ + R +SD S+ Sbjct: 45 VLDVGTGSGA--LALHAARLGARVTAVDIARRAVATARLNALLH--RRRITVQRSDLLSA 100 Query: 161 VEGL-FDVIVSNPPYIESVI 179 + G +D+++ NPPY+ S + Sbjct: 101 LPGRSYDLVICNPPYVPSPL 120 >gi|189465685|ref|ZP_03014470.1| hypothetical protein BACINT_02046 [Bacteroides intestinalis DSM 17393] gi|189433949|gb|EDV02934.1| hypothetical protein BACINT_02046 [Bacteroides intestinalis DSM 17393] Length = 235 Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust. Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 1/76 (1%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW-F 158 +ILD+GTGTG + L L + +P + ++I A A+ N + + R + +D+ Sbjct: 40 QILDIGTGTGLIALMLAQRNPLSQVTAIEIDEAAATQAEENIARSPWANRIKVICNDFSL 99 Query: 159 SSVEGLFDVIVSNPPY 174 + + +IVSNPPY Sbjct: 100 FQTDNKYHLIVSNPPY 115 >gi|330918091|ref|XP_003298081.1| hypothetical protein PTT_08682 [Pyrenophora teres f. teres 0-1] gi|311328908|gb|EFQ93816.1| hypothetical protein PTT_08682 [Pyrenophora teres f. teres 0-1] Length = 441 Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust. Identities = 37/133 (27%), Positives = 63/133 (47%), Gaps = 37/133 (27%) Query: 99 VRILDLGTGTGAVCLALLKESPF--------FKGVGVDISCKALEIA------------- 137 +R+LDL TGTG C+ LL + + +GVDIS KA+ +A Sbjct: 124 LRVLDLCTGTG--CIPLLFKHQLSSARNDISLRLLGVDISLKAIRLASHNLQRLQKDGQL 181 Query: 138 ---------KSNAVTNGVSERFDTLQSDW----FSSVEGLFDVIVSNPPYIE-SVIVDCL 183 ++N +TN E+ + + S ++++ +D+++SNPPYI S Sbjct: 182 SVQGNFDFLRANVMTNPFVEQTEGIPSVKAALNYAAMPSFWDILISNPPYISPSEFWKTT 241 Query: 184 GLEVRDFDPRISL 196 VR F+P+++L Sbjct: 242 TRSVRGFEPKLAL 254 >gi|262395213|ref|YP_003287067.1| putative O-methyltransferase [Vibrio sp. Ex25] gi|262338807|gb|ACY52602.1| predicted O-methyltransferase [Vibrio sp. Ex25] Length = 215 Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust. Identities = 29/86 (33%), Positives = 41/86 (47%), Gaps = 1/86 (1%) Query: 93 IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152 I+ + +ILD+GTGTG + L + + VDI A+E A+ N V + S R Sbjct: 14 IQSPNNAQILDIGTGTGLLALMCAQRFTEAQITAVDIELTAIEAAQKNVVQSPWSARVCV 73 Query: 153 LQSDWFS-SVEGLFDVIVSNPPYIES 177 SD + F I+ NPPY S Sbjct: 74 HHSDILDFTPTHPFQRIICNPPYFNS 99 >gi|3282093|emb|CAA07516.1| hypothetical protein [Thermotoga neapolitana] Length = 258 Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust. Identities = 27/72 (37%), Positives = 42/72 (58%), Gaps = 3/72 (4%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R++D+G GTG + + K + + VD+ +A+E+AK N N V +SD S Sbjct: 126 RVVDVGCGTGILAIVAKKLGASY-VLAVDVDEQAVEVAKENVQKNSVD--VTVKRSDLLS 182 Query: 160 SVEGLFDVIVSN 171 VEG+FD++VSN Sbjct: 183 EVEGVFDLVVSN 194 >gi|259047254|ref|ZP_05737655.1| methyltransferase domain protein [Granulicatella adiacens ATCC 49175] gi|259036304|gb|EEW37559.1| methyltransferase domain protein [Granulicatella adiacens ATCC 49175] Length = 206 Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust. Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 2/75 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LD+G G G + L+ K P VD++ +ALE+A+ NA NG+ E +S + Sbjct: 64 KLLDVGCGYGPMGLSFAKAYPKMHVEMVDVNERALELARRNAKANGI-ENVLIHESSIYD 122 Query: 160 SVEGL-FDVIVSNPP 173 + + VI+SNPP Sbjct: 123 EINAKDYSVIISNPP 137 >gi|294618341|ref|ZP_06697922.1| methyltransferase small domain superfamily [Enterococcus faecium E1679] gi|291595435|gb|EFF26747.1| methyltransferase small domain superfamily [Enterococcus faecium E1679] Length = 210 Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust. Identities = 35/97 (36%), Positives = 54/97 (55%), Gaps = 8/97 (8%) Query: 78 TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137 + +L+D+ LP D +ILD+G G G + LAL + F + VDI+ +A+ +A Sbjct: 55 SRVLIDAFDWEELP-----DEGKILDVGCGYGPIGLALAFATQRFVEM-VDINERAVSLA 108 Query: 138 KSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPP 173 + NA N + E D QS+ + +V E + IVSNPP Sbjct: 109 QGNAKRNQI-EHVDIHQSNIYEAVHEETYAAIVSNPP 144 >gi|330952368|gb|EGH52628.1| hypothetical protein PSYCIT7_13539 [Pseudomonas syringae Cit 7] Length = 166 Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust. Identities = 22/51 (43%), Positives = 33/51 (64%), Gaps = 1/51 (1%) Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE 176 VDI+ KAL A++NA G+ + + SD S + G FD+IV+NPPY++ Sbjct: 14 AVDINPKALHFAQTNAAVAGL-KNMECCHSDILSGLNGNFDLIVANPPYMK 63 >gi|323127350|gb|ADX24647.1| 16S rRNA m(2)G 1207 methyltransferase [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 210 Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust. Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 3/73 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LDLG G G + ++L K + VDI+ +A+++A+ NA N V QS+ + + Sbjct: 72 VLDLGCGYGPLGISLAKVQEV-EATLVDINNRAIDLAQKNARQNQVD--VTIFQSNIYEN 128 Query: 161 VEGLFDVIVSNPP 173 V G F+ I+SNPP Sbjct: 129 VRGSFNHIISNPP 141 >gi|187933312|ref|YP_001886270.1| type I restriction-modification system, M subunit [Clostridium botulinum B str. Eklund 17B] gi|187721465|gb|ACD22686.1| type I restriction-modification system, M subunit [Clostridium botulinum B str. Eklund 17B] Length = 529 Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust. Identities = 44/152 (28%), Positives = 70/152 (46%), Gaps = 24/152 (15%) Query: 93 IEKRD-VVRILDLGTGTGAVCLALLKESPF---FKGVGVDISCKALEIAKSNAVTNGVS- 147 +EK D + + D G+G++ L + +E P K G +++ +A+ N + +G+S Sbjct: 221 VEKSDELFSVYDPTMGSGSLLLTVGQELPKGTPMKYFGQELNTTTYNLARMNLMMHGISY 280 Query: 148 -----ERFDTLQSDWFSS--VEGL-----FDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195 DTL+SDW +G+ FD +V+NPPY D L+ DPR S Sbjct: 281 NNMVLSNADTLESDWPDGPDAKGIDHPRSFDAVVANPPYSAKWDNDETKLK----DPRFS 336 Query: 196 LDGGIDGLSH--YRTIADGVSRHLNKDGLCSV 225 G + S Y I + HLNK G ++ Sbjct: 337 EYGKLAPASKADYAFILHSI-YHLNKTGTMAI 367 >gi|330832907|ref|YP_004401732.1| methyltransferase small [Streptococcus suis ST3] gi|329307130|gb|AEB81546.1| methyltransferase small [Streptococcus suis ST3] Length = 169 Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust. Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 7/75 (9%) Query: 101 ILDLGTGTGAVCLALLKESPFF--KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 +LD+G G G + L L K F K +DI+ +AL++A NA NGV + QS+ + Sbjct: 34 VLDVGCGYGPIGLTLAK---VFNTKTTLIDINSRALDLATKNAERNGVIAKI--YQSNIY 88 Query: 159 SSVEGLFDVIVSNPP 173 +V+ F+ IVSNPP Sbjct: 89 ENVDETFNHIVSNPP 103 >gi|315446631|ref|YP_004079510.1| HemK-related methylase [Mycobacterium sp. Spyr1] gi|315264934|gb|ADU01676.1| HemK-related putative methylase [Mycobacterium sp. Spyr1] Length = 230 Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust. Identities = 41/138 (29%), Positives = 66/138 (47%), Gaps = 11/138 (7%) Query: 67 LSSDTFEPRPETELLVDSAL-AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 L+ D + P+ ++ LL+D+ + A +P R+ DL TG+G + +A Sbjct: 13 LAVDVYPPQEDSHLLIDAMIEAGVVPG------ARVADLCTGSGVIAIAAAAAG-AASVT 65 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLG 184 DI KA++ + A+ GV D + W +VE FDV+++NPPY+ +D G Sbjct: 66 AFDICPKAVQRTREEALAAGV--EVDVHRGSWARAVEFRPFDVVLANPPYVPEAPMDDSG 123 Query: 185 LEVRDFDPRISLDGGIDG 202 L P + D G DG Sbjct: 124 LISATAGPSRAWDAGPDG 141 >gi|226327941|ref|ZP_03803459.1| hypothetical protein PROPEN_01822 [Proteus penneri ATCC 35198] gi|225203645|gb|EEG85999.1| hypothetical protein PROPEN_01822 [Proteus penneri ATCC 35198] Length = 123 Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust. Identities = 30/88 (34%), Positives = 50/88 (56%), Gaps = 3/88 (3%) Query: 153 LQSDWFSS-VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIAD 211 +QSD F++ V +D+IV+NPPY++ + L E + +P ++L GIDGL R I Sbjct: 1 MQSDLFNALVPTPYDIIVTNPPYVDIEDMGDLPDEYQ-VEPELALASGIDGLDITRQILL 59 Query: 212 GVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 +L++ G+ E+G N V ++ F Sbjct: 60 KAPEYLSEKGILVCEVG-NSMVHLIEQF 86 >gi|167839956|ref|ZP_02466640.1| hypothetical protein Bpse38_25004 [Burkholderia thailandensis MSMB43] Length = 329 Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust. Identities = 28/84 (33%), Positives = 42/84 (50%), Gaps = 13/84 (15%) Query: 71 TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130 +F P+PE +L K +I+DLG+G+G + +L + +GVGVD+S Sbjct: 139 SFYPQPERAIL-------------KLRPKKIVDLGSGSGGFLIRMLHQLDGARGVGVDLS 185 Query: 131 CKALEIAKSNAVTNGVSERFDTLQ 154 A E AK A NG + R + L Sbjct: 186 ATATEQAKQAAEANGFAGRLEFLH 209 >gi|254362226|ref|ZP_04978341.1| possible methyltransferase [Mannheimia haemolytica PHL213] gi|153093798|gb|EDN74737.1| possible methyltransferase [Mannheimia haemolytica PHL213] Length = 235 Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust. Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 2/81 (2%) Query: 96 RDVVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQ 154 +D ILDLG G+G V L L + + + +++ A + A NA + + R LQ Sbjct: 35 KDCQNILDLGIGSGLVALMLAQRTDDCCHITALELEPNAYQQAVENAQNSAWANRISVLQ 94 Query: 155 SDWFS-SVEGLFDVIVSNPPY 174 D + E FD+IVSNPPY Sbjct: 95 GDVMQQAFEQKFDLIVSNPPY 115 >gi|289565392|ref|ZP_06445842.1| conserved hypothetical protein [Enterococcus faecium D344SRF] gi|294615414|ref|ZP_06695287.1| methyltransferase small domain superfamily [Enterococcus faecium E1636] gi|289162882|gb|EFD10732.1| conserved hypothetical protein [Enterococcus faecium D344SRF] gi|291591788|gb|EFF23424.1| methyltransferase small domain superfamily [Enterococcus faecium E1636] Length = 210 Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust. Identities = 35/97 (36%), Positives = 54/97 (55%), Gaps = 8/97 (8%) Query: 78 TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137 + +L+D+ LP D +ILD+G G G + LAL + F + VDI+ +A+ +A Sbjct: 55 SRVLIDAFDWEELP-----DEGKILDVGCGYGPIGLALAFATQRFVEM-VDINERAVSLA 108 Query: 138 KSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPP 173 + NA N + E D QS+ + +V E + IVSNPP Sbjct: 109 QGNAKRNQI-EHVDIHQSNIYEAVHEETYAAIVSNPP 144 >gi|332300278|ref|YP_004442199.1| Methyltransferase type 11 [Porphyromonas asaccharolytica DSM 20707] gi|332177341|gb|AEE13031.1| Methyltransferase type 11 [Porphyromonas asaccharolytica DSM 20707] Length = 244 Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust. Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 4/83 (4%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LD+GTGTG + L L + P +DI +A+ A+ N + +R L D + Sbjct: 40 QVLDVGTGTGILSLMLAQTYPSAMVTAIDIDDEAVRTAQDNFSRSPYGDRLTALSCDITA 99 Query: 160 SVEGL----FDVIVSNPPYIESV 178 L +D+I+SNPPY + + Sbjct: 100 PELALPPRTYDLIISNPPYYDGL 122 >gi|309775480|ref|ZP_07670482.1| putative methyltransferase [Erysipelotrichaceae bacterium 3_1_53] gi|308916776|gb|EFP62514.1| putative methyltransferase [Erysipelotrichaceae bacterium 3_1_53] Length = 220 Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust. Identities = 31/94 (32%), Positives = 50/94 (53%), Gaps = 4/94 (4%) Query: 83 DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142 D+AL ++K + R+LD+GT GA+ LA + P GVDI +A+++A N Sbjct: 28 DTALLAQFMTVKKGE--RVLDIGTNNGALLLAAQRYEPKHM-YGVDIQKEAIQVADMNMR 84 Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE 176 + ++ S + +E + DVIV NPPY + Sbjct: 85 HHNITNVTLLTASIHDAQLEKM-DVIVCNPPYFK 117 >gi|111023772|ref|YP_706744.1| rRNA/tRNA methylase [Rhodococcus jostii RHA1] gi|110823302|gb|ABG98586.1| probable rRNA/tRNA methylase [Rhodococcus jostii RHA1] Length = 492 Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust. Identities = 29/78 (37%), Positives = 42/78 (53%), Gaps = 5/78 (6%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LD+GTG G AL S D++ +A+++A A N ER + L WF Sbjct: 158 LLDVGTGCG--IQALHGASYADSVTATDLNVRAVDLAAVTAALN--EERVELLAGSWFEP 213 Query: 161 VEG-LFDVIVSNPPYIES 177 VEG FD +V+NPP++ S Sbjct: 214 VEGRTFDQVVANPPFVVS 231 >gi|83942269|ref|ZP_00954730.1| hypothetical protein EE36_14552 [Sulfitobacter sp. EE-36] gi|83846362|gb|EAP84238.1| hypothetical protein EE36_14552 [Sulfitobacter sp. EE-36] Length = 408 Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust. Identities = 30/80 (37%), Positives = 40/80 (50%), Gaps = 7/80 (8%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+LD+ G LA L V VD S ALE+A+ A GV++RF T Q D F Sbjct: 237 RVLDVFAHVGGFSLAALAHG-ASSAVAVDGSAPALELAQQGAEAMGVTDRFATRQGDAFD 295 Query: 160 SVEGL------FDVIVSNPP 173 + L FDV++ +PP Sbjct: 296 ILTALRAEGEEFDVVICDPP 315 >gi|330809678|ref|YP_004354140.1| methyltransferase small domain [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327377786|gb|AEA69136.1| Conserved hypothetical protein, containing Methyltransferase small domain [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 337 Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust. Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 1/78 (1%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 V R +D+G G G + + + + + VDI+ +AL ++ NA V + +SD Sbjct: 138 VHRAVDIGCGAGVGAIVIARARREAQVLAVDINPQALRLSAVNAALAEVGN-VEVARSDV 196 Query: 158 FSSVEGLFDVIVSNPPYI 175 V G FD+IV+NPPY+ Sbjct: 197 LQDVPGNFDLIVANPPYM 214 >gi|294085839|ref|YP_003552599.1| putative O-methyltransferase [Candidatus Puniceispirillum marinum IMCC1322] gi|292665414|gb|ADE40515.1| Predicted O-methyltransferase [Candidatus Puniceispirillum marinum IMCC1322] Length = 253 Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust. Identities = 33/92 (35%), Positives = 45/92 (48%), Gaps = 7/92 (7%) Query: 86 LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145 LA ++P+ KR ILD+G G G V L + K P V+I L +A+ N N Sbjct: 37 LAAAVPQRTKR----ILDMGCGVGGVALCIAKRLPDVHVTAVEIDPDMLALAERNIKDNN 92 Query: 146 VSERFDTLQSD--WFSSV-EGLFDVIVSNPPY 174 ++ + L D S V FD +VSNPPY Sbjct: 93 LAAQIRLLTGDIKALSPVLANSFDHVVSNPPY 124 >gi|242313188|ref|ZP_04812205.1| conserved hypothetical protein [Burkholderia pseudomallei 1106b] gi|254173998|ref|ZP_04880661.1| conserved hypothetical protein [Burkholderia mallei ATCC 10399] gi|160695045|gb|EDP85015.1| conserved hypothetical protein [Burkholderia mallei ATCC 10399] gi|242136427|gb|EES22830.1| conserved hypothetical protein [Burkholderia pseudomallei 1106b] Length = 432 Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust. Identities = 36/121 (29%), Positives = 56/121 (46%), Gaps = 13/121 (10%) Query: 71 TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130 +F P+PE +L K +I+DLG+G+G + +L + +GVGVD+S Sbjct: 242 SFYPQPERAIL-------------KLRPKKIVDLGSGSGGFLIRMLHQLDGARGVGVDLS 288 Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDF 190 A E AK A NG + R + L S V+ + ++ + V+ D L E R Sbjct: 289 ATATEQAKQAAEANGFAGRLEFLHRPIQSLVDDPAPLKGADVVHAGFVMHDLLPAEERTL 348 Query: 191 D 191 D Sbjct: 349 D 349 >gi|261868483|ref|YP_003256405.1| 16S ribosomal RNA m2G1207 methyltransferase [Aggregatibacter actinomycetemcomitans D11S-1] gi|293390498|ref|ZP_06634832.1| ribosomal RNA small subunit methyltransferase C [Aggregatibacter actinomycetemcomitans D7S-1] gi|261413815|gb|ACX83186.1| ribosomal RNA small subunit methyltransferase C [Aggregatibacter actinomycetemcomitans D11S-1] gi|290951032|gb|EFE01151.1| ribosomal RNA small subunit methyltransferase C [Aggregatibacter actinomycetemcomitans D7S-1] Length = 334 Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust. Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 2/79 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 +LD+G G G + + + +P + + DI AL AK N + + + SD FS Sbjct: 197 EVLDVGCGAGVIGSYIQRHNPNTRLIMTDIHALALASAKRTLQENRL--QGTVVASDVFS 254 Query: 160 SVEGLFDVIVSNPPYIESV 178 V+G FD+I+SNPP+ + + Sbjct: 255 HVDGKFDLIISNPPFHDGI 273 >gi|312132197|ref|YP_003999537.1| methyltransferase small [Leadbetterella byssophila DSM 17132] gi|311908743|gb|ADQ19184.1| methyltransferase small [Leadbetterella byssophila DSM 17132] Length = 229 Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust. Identities = 40/148 (27%), Positives = 68/148 (45%), Gaps = 12/148 (8%) Query: 75 RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134 R ++ DS L +L IE D R LD+GTGTG + L + + +P V+I A+ Sbjct: 13 RSAMKVCTDSCLFGAL--IEASDAKRALDIGTGTGLLSLMVAQRNPSLIIDAVEIDSGAV 70 Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPR 193 + A N + + + R D V + ++VI NPP+ E+ + DP+ Sbjct: 71 QDATENVLDSPFASRIKVFYEDIKDFVPKEKYEVIFCNPPFYENRLSSP--------DPK 122 Query: 194 ISLDGGIDGLSHYRTIADGVSRHLNKDG 221 +L L ++ +++ R L +DG Sbjct: 123 KNL-AHHASLLKWKEVSECAKRLLAEDG 149 >gi|311033111|ref|ZP_07711201.1| Type I restriction-modification system methyltransferase subunit [Bacillus sp. m3-13] Length = 538 Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust. Identities = 31/102 (30%), Positives = 52/102 (50%), Gaps = 24/102 (23%) Query: 97 DVVRILDLGTGTGAVCLALLKESP---------FFKGVGVDISCKALEIAKSNAVTNGVS 147 D R+ D G+G++ L + KE P F+ G +++ +A+ N + +GV+ Sbjct: 215 DQFRVYDPTMGSGSLLLTVQKELPNGDKEGSVEFY---GQELNTTTYNLARMNLMMHGVN 271 Query: 148 ------ERFDTLQSDW-FSSVEGL-----FDVIVSNPPYIES 177 +R DTL +DW F+ +G FD +VSNPPY ++ Sbjct: 272 YRNMELKRADTLDADWPFAEKDGTQIPLKFDAVVSNPPYSQN 313 >gi|226306292|ref|YP_002766252.1| hypothetical protein RER_28050 [Rhodococcus erythropolis PR4] gi|226185409|dbj|BAH33513.1| conserved hypothetical protein [Rhodococcus erythropolis PR4] Length = 499 Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust. Identities = 28/80 (35%), Positives = 44/80 (55%), Gaps = 7/80 (8%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 V +LDLGTG G + L + + V DI+ +A+++ + NG+ + LQ Sbjct: 160 VGSVLDLGTGCG---IQALHANTYADSVTATDINQRAVDLTAATMALNGLD--VELLQGS 214 Query: 157 WFSSVEG-LFDVIVSNPPYI 175 WF VEG FD +V+NPP++ Sbjct: 215 WFEPVEGRTFDQVVANPPFV 234 >gi|309355779|emb|CAP38256.2| hypothetical protein CBG_21464 [Caenorhabditis briggsae AF16] Length = 230 Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust. Identities = 33/121 (27%), Positives = 62/121 (51%), Gaps = 7/121 (5%) Query: 61 YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE-S 119 Y ++ + D +EP +T LL+D A+ + I R +L++G G+G V + + Sbjct: 8 YRLQAIRAHDIYEPAEDTFLLID-AIEKDIKEIRSRQPKLVLEIGCGSGVVSTFVNQALG 66 Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL---FDVIVSNPPYIE 176 V D++ AL++ A N + + D +++D F+ +E L DV++ NPPY+ Sbjct: 67 GNVTSVATDLNPHALDVTLETAKLNDI--KIDVVRTDLFAGLENLVGKVDVLLFNPPYVP 124 Query: 177 S 177 + Sbjct: 125 T 125 >gi|145221632|ref|YP_001132310.1| putative methylase [Mycobacterium gilvum PYR-GCK] gi|145214118|gb|ABP43522.1| putative methylase [Mycobacterium gilvum PYR-GCK] Length = 230 Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust. Identities = 41/138 (29%), Positives = 66/138 (47%), Gaps = 11/138 (7%) Query: 67 LSSDTFEPRPETELLVDSAL-AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 L+ D + P+ ++ LL+D+ + A +P R+ DL TG+G + +A Sbjct: 13 LAVDVYPPQEDSHLLIDAMIEAGVVPG------ARVADLCTGSGVIAIAAAAAG-AASVT 65 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLG 184 DI KA++ + A+ GV D + W +VE FDV+++NPPY+ +D G Sbjct: 66 AFDICPKAVQRTREEALAAGV--EVDVHRGSWARAVEFRPFDVVLANPPYVPEAPMDDSG 123 Query: 185 LEVRDFDPRISLDGGIDG 202 L P + D G DG Sbjct: 124 LISATAGPSRAWDAGPDG 141 >gi|164688849|ref|ZP_02212877.1| hypothetical protein CLOBAR_02497 [Clostridium bartlettii DSM 16795] gi|164602053|gb|EDQ95518.1| hypothetical protein CLOBAR_02497 [Clostridium bartlettii DSM 16795] Length = 249 Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust. Identities = 27/99 (27%), Positives = 54/99 (54%), Gaps = 8/99 (8%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 +D+ L + ++ ++ +++DLGTGTG + + + +S K +GV+I + E+A + Sbjct: 32 IDAVLLANFAKV--KNNAKVVDLGTGTGIIPILIAGKSKASKIIGVEIQEEVYEMATRSV 89 Query: 142 VTNGVSERFDTLQSDWFS-----SVEGLFDVIVSNPPYI 175 N + +R + + +D + V G + V SNPPY+ Sbjct: 90 KLNDLEDRVEIINADIKTIDKELEVHG-YHVATSNPPYM 127 >gi|253681576|ref|ZP_04862373.1| type I restriction-modification system, M subunit [Clostridium botulinum D str. 1873] gi|253561288|gb|EES90740.1| type I restriction-modification system, M subunit [Clostridium botulinum D str. 1873] Length = 538 Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust. Identities = 28/93 (30%), Positives = 49/93 (52%), Gaps = 18/93 (19%) Query: 100 RILDLGTGTGAVCLALLKESPF------FKGVGVDISCKALEIAKSNAVTNGVS------ 147 R+ D G+G++ L + KE P+ + G +++ +A+ N + +GV+ Sbjct: 218 RVYDPTMGSGSLLLTVQKELPYGDEEGSVEFFGQELNTTTYNLARMNLMMHGVNYRNMEL 277 Query: 148 ERFDTLQSDW-FSSVEGL-----FDVIVSNPPY 174 +R DTL +DW F+ +G FD +V+NPPY Sbjct: 278 KRADTLDADWPFAEKDGTQIPLKFDAVVANPPY 310 >gi|69247085|ref|ZP_00604217.1| Methyltransferase small [Enterococcus faecium DO] gi|258615232|ref|ZP_05713002.1| hypothetical protein EfaeD_05923 [Enterococcus faecium DO] gi|293562924|ref|ZP_06677391.1| methyltransferase small domain superfamily [Enterococcus faecium E1162] gi|293567952|ref|ZP_06679293.1| methyltransferase small domain superfamily [Enterococcus faecium E1071] gi|294623795|ref|ZP_06702623.1| 16S RNA methylase [Enterococcus faecium U0317] gi|314937587|ref|ZP_07844913.1| methyltransferase small domain protein [Enterococcus faecium TX0133a04] gi|314942914|ref|ZP_07849727.1| methyltransferase small domain protein [Enterococcus faecium TX0133C] gi|314947950|ref|ZP_07851354.1| methyltransferase small domain protein [Enterococcus faecium TX0082] gi|314950866|ref|ZP_07853935.1| methyltransferase small domain protein [Enterococcus faecium TX0133A] gi|314991485|ref|ZP_07856962.1| methyltransferase small domain protein [Enterococcus faecium TX0133B] gi|314994995|ref|ZP_07860115.1| methyltransferase small domain protein [Enterococcus faecium TX0133a01] gi|68194969|gb|EAN09436.1| Methyltransferase small [Enterococcus faecium DO] gi|291589537|gb|EFF21344.1| methyltransferase small domain superfamily [Enterococcus faecium E1071] gi|291596749|gb|EFF27972.1| 16S RNA methylase [Enterococcus faecium U0317] gi|291605050|gb|EFF34517.1| methyltransferase small domain superfamily [Enterococcus faecium E1162] gi|313590721|gb|EFR69566.1| methyltransferase small domain protein [Enterococcus faecium TX0133a01] gi|313593965|gb|EFR72810.1| methyltransferase small domain protein [Enterococcus faecium TX0133B] gi|313596875|gb|EFR75720.1| methyltransferase small domain protein [Enterococcus faecium TX0133A] gi|313598386|gb|EFR77231.1| methyltransferase small domain protein [Enterococcus faecium TX0133C] gi|313642964|gb|EFS07544.1| methyltransferase small domain protein [Enterococcus faecium TX0133a04] gi|313645548|gb|EFS10128.1| methyltransferase small domain protein [Enterococcus faecium TX0082] Length = 210 Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust. Identities = 35/97 (36%), Positives = 54/97 (55%), Gaps = 8/97 (8%) Query: 78 TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137 + +L+D+ LP D +ILD+G G G + LAL + F + VDI+ +A+ +A Sbjct: 55 SRVLIDAFDWEELP-----DEGKILDVGCGYGPIGLALAFATQRFVEM-VDINERAVSLA 108 Query: 138 KSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPP 173 + NA N + E D QS+ + +V E + IVSNPP Sbjct: 109 QGNAKRNQI-EHVDIHQSNIYEAVHEETYAAIVSNPP 144 >gi|304382913|ref|ZP_07365395.1| metallothionein SmtA [Prevotella marshii DSM 16973] gi|304335938|gb|EFM02186.1| metallothionein SmtA [Prevotella marshii DSM 16973] Length = 232 Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust. Identities = 41/139 (29%), Positives = 65/139 (46%), Gaps = 10/139 (7%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 +RILD+GTGTG + L + + G+DI A A N + ++R + ++ Sbjct: 37 MRILDIGTGTGLIALMMAQRFQQAMVTGIDIDTAACRQAWENVKASPFADRVEIQETSVQ 96 Query: 159 SSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217 S + FD IVSNPP+ V+ L R+ D + ++ D LS YR + R L Sbjct: 97 SYMPSEAFDAIVSNPPF----FVNSL----RNPDKQRAVARHTDTLS-YRELFAHAYRLL 147 Query: 218 NKDGLCSVEIGYNQKVDVV 236 G+ S+ + DV+ Sbjct: 148 TAVGIFSIIVPAEMWEDVL 166 >gi|254511958|ref|ZP_05124025.1| methyltransferase small [Rhodobacteraceae bacterium KLH11] gi|221535669|gb|EEE38657.1| methyltransferase small [Rhodobacteraceae bacterium KLH11] Length = 256 Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust. Identities = 37/121 (30%), Positives = 56/121 (46%), Gaps = 14/121 (11%) Query: 59 DFYNVRLTLSSDTFEPRPETELLVDSAL-AFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117 DF R+ L ++PR VD L A ++P + V L+LG G GA L LL Sbjct: 13 DFLGGRIRL----WQPRTGYRAGVDPVLLAAAIPANPGQSV---LELGCGAGAAILCLLA 65 Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPP 173 P + GV+I +A+ NA N +++D + + L FD +++NPP Sbjct: 66 RVPDLQATGVEIQPAYAALARRNATRNAAP--LTVVEADLKALPDDLRQKQFDHVIANPP 123 Query: 174 Y 174 Y Sbjct: 124 Y 124 >gi|291513726|emb|CBK62936.1| Predicted O-methyltransferase [Alistipes shahii WAL 8301] Length = 226 Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust. Identities = 31/77 (40%), Positives = 42/77 (54%), Gaps = 5/77 (6%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER--FDTLQSDW 157 R+LD+GTGTG + L L + +P GVDI + A+ NA + S R F Sbjct: 22 RMLDIGTGTGLIALMLAQRAPEAHVTGVDID--DVGQARENAAASPWSGRVAFAQCPVQE 79 Query: 158 FSSVEGLFDVIVSNPPY 174 F + E FD+IVSNPP+ Sbjct: 80 FETPEP-FDLIVSNPPF 95 >gi|239979273|ref|ZP_04701797.1| methyltransferas [Streptomyces albus J1074] gi|291451152|ref|ZP_06590542.1| methyltransferase [Streptomyces albus J1074] gi|291354101|gb|EFE81003.1| methyltransferase [Streptomyces albus J1074] Length = 224 Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust. Identities = 31/78 (39%), Positives = 42/78 (53%), Gaps = 5/78 (6%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LDLGTGTGAV L + + VDIS A+ A+ NA R + D + Sbjct: 43 VLDLGTGTGAVALHAARTG--ARVTAVDISWTAVLTARLNAAR--ARCRLRVHRGDLTAP 98 Query: 161 VEG-LFDVIVSNPPYIES 177 V G FD++VSNPPY+ + Sbjct: 99 VTGRTFDLVVSNPPYVPA 116 >gi|39972627|ref|XP_367704.1| hypothetical protein MGG_07615 [Magnaporthe oryzae 70-15] gi|145016823|gb|EDK01253.1| hypothetical protein MGG_07615 [Magnaporthe oryzae 70-15] Length = 242 Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust. Identities = 48/140 (34%), Positives = 64/140 (45%), Gaps = 14/140 (10%) Query: 102 LDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 L++G G+G V L + S K V GVDI+ A+E +N NG+ F SD F Sbjct: 84 LEIGVGSGLVSLCIA--SAGSKTVSGVDINPNAVEFTANNLQANGLKGNFTV--SDIFEK 139 Query: 161 VEGLFDVIVSNPPY-IESVIVDCLGLEVRDFDPRISL-----DGGIDGLSHYRTIADGVS 214 VEG FD I N P+ +S I D L E + D L D L+ I G S Sbjct: 140 VEGKFDFIFWNHPWQYDSTIPDQLKSE-KTHDSEYKLLRRFVAEAKDYLTEKGVILLGTS 198 Query: 215 RHLNKDGLCSVEI--GYNQK 232 + N D + ++ GYN K Sbjct: 199 AYANLDAIKTIAQSNGYNHK 218 >gi|295660939|ref|XP_002791025.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb01] gi|226280952|gb|EEH36518.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb01] Length = 445 Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust. Identities = 38/114 (33%), Positives = 61/114 (53%), Gaps = 21/114 (18%) Query: 76 PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG---VGVDISCK 132 PE + ++ F L + ILDLGTG G + LALL++ F+G VGVD S K Sbjct: 213 PEKVMKFLTSECFPLAPCNTQSQPIILDLGTGNGGM-LALLRDEGGFEGSRMVGVDYSPK 271 Query: 133 ALEIAK-------SNAVTNGVSE-RFD--------TLQS-DWFSSVEGLFDVIV 169 ++E+A+ + A ++ +S RF+ +Q+ DWF + EG FD+++ Sbjct: 272 SIELARRLHDGSTTTAQSSDLSRIRFEVWDVFDNRAVQTLDWFPAAEGGFDIVL 325 >gi|304320585|ref|YP_003854228.1| hypothetical protein PB2503_05057 [Parvularcula bermudensis HTCC2503] gi|303299487|gb|ADM09086.1| hypothetical protein PB2503_05057 [Parvularcula bermudensis HTCC2503] Length = 248 Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust. Identities = 28/76 (36%), Positives = 43/76 (56%), Gaps = 3/76 (3%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+LDLGTG G +++ + V D+S AL A N GV+ + SD F Sbjct: 61 RVLDLGTGCGVGAYFCSEKAD--QIVASDVSATALANAAENCRRFGVTN-VEFRHSDMFD 117 Query: 160 SVEGLFDVIVSNPPYI 175 +++G FD+I++NPPY+ Sbjct: 118 NIQGRFDLILANPPYL 133 >gi|332158532|ref|YP_004423811.1| hypothetical protein PNA2_0891 [Pyrococcus sp. NA2] gi|331033995|gb|AEC51807.1| hypothetical protein PNA2_0891 [Pyrococcus sp. NA2] Length = 396 Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust. Identities = 29/82 (35%), Positives = 45/82 (54%), Gaps = 11/82 (13%) Query: 100 RILDLGTGTG--AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 R+LD+ T TG A+ A+ +G+D S KA+E AK NA NGV +R + + + Sbjct: 220 RVLDVFTYTGGFAIHAAIAGAEEV---IGIDKSPKAIETAKENAKLNGVEDRVNFMVGNA 276 Query: 158 FSSVEGL------FDVIVSNPP 173 F +E L FD+++ +PP Sbjct: 277 FEEMEKLQKRGEKFDIVILDPP 298 >gi|237739012|ref|ZP_04569493.1| ribosomal RNA small subunit methyltransferase C [Fusobacterium sp. 2_1_31] gi|229423612|gb|EEO38659.1| ribosomal RNA small subunit methyltransferase C [Fusobacterium sp. 2_1_31] Length = 222 Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust. Identities = 30/98 (30%), Positives = 52/98 (53%), Gaps = 6/98 (6%) Query: 83 DSALAFSLPR--IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140 D+ L F+ + + KR++ ++LD+GTG G + + L + VG+DI + +E A Sbjct: 29 DTILLFNYLKKSLSKRNI-KLLDIGTGNGILPILLSDNDMIEEIVGIDIQNENIERANKA 87 Query: 141 AVTNGVSE--RFDTLQSDWFSSVEGLFDVIVSNPPYIE 176 N + + F L + + FDV++SNPPY+E Sbjct: 88 LELNKIEKNINFTCLDVKEYKNA-NYFDVVISNPPYME 124 >gi|260907290|ref|ZP_05915612.1| putative methyltransferase [Brevibacterium linens BL2] Length = 406 Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust. Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 4/84 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW--F 158 ILDLG G G + A ++ + G GVD+S A+ A+ A NG+ DT+ +D Sbjct: 268 ILDLGCGNGWLLTAAMQVTAAKNGTGVDVSKAAVTSARETAEANGL--EVDTILADATDV 325 Query: 159 SSVEGLFDVIVSNPPYIESVIVDC 182 ++ G D+I+ NPP+ + ++ Sbjct: 326 QALSGGHDLILLNPPFHQGTTIET 349 >gi|149376592|ref|ZP_01894352.1| nucleotide methyltransferase [Marinobacter algicola DG893] gi|149359110|gb|EDM47574.1| nucleotide methyltransferase [Marinobacter algicola DG893] Length = 380 Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust. Identities = 24/82 (29%), Positives = 39/82 (47%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 R++DLG G G + L L +P + D+S +A+ A+ N T SD Sbjct: 234 ARVMDLGCGNGVLGLTALARNPALEVAFADVSSQAVASARHNVQTAFPGAVASFYHSDGI 293 Query: 159 SSVEGLFDVIVSNPPYIESVIV 180 G +D+++ NPP+ E +V Sbjct: 294 PEAAGRYDLVLLNPPFHEGGVV 315 >gi|254520552|ref|ZP_05132608.1| methyltransferase small [Clostridium sp. 7_2_43FAA] gi|226914301|gb|EEH99502.1| methyltransferase small [Clostridium sp. 7_2_43FAA] Length = 249 Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust. Identities = 31/97 (31%), Positives = 53/97 (54%), Gaps = 6/97 (6%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 VD+ L + ++KR R +DL TGTG V L + + +G++I + +E+AK ++ Sbjct: 34 VDAVLLSNFANVKKRH--RAIDLCTGTGIVPFLLYGKYKPVEVIGIEIQNEMVEMAKRSS 91 Query: 142 VTNGVSE--RFDT--LQSDWFSSVEGLFDVIVSNPPY 174 N + + +F+ L+ F + G FDV+ NPPY Sbjct: 92 KYNELEDIIKFENADLKDMKFLNQLGKFDVLTVNPPY 128 >gi|145594015|ref|YP_001158312.1| methyltransferase small [Salinispora tropica CNB-440] gi|145303352|gb|ABP53934.1| methyltransferase small [Salinispora tropica CNB-440] Length = 494 Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust. Identities = 29/82 (35%), Positives = 46/82 (56%), Gaps = 5/82 (6%) Query: 95 KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154 ++ V LDLGTG+G L L + + D+S +AL A + A NG + ++ L+ Sbjct: 153 RQPVETALDLGTGSGIQALHLATHA--RRVTATDLSERALRFAATTAALNG--QDWELLR 208 Query: 155 SDWFSSVEGL-FDVIVSNPPYI 175 D + V G FD++VSNPP++ Sbjct: 209 GDLIAPVAGRRFDLVVSNPPFV 230 >gi|170718455|ref|YP_001783671.1| methyltransferase small [Haemophilus somnus 2336] gi|262828510|sp|B0UWL8|TRMN6_HAES2 RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName: Full=tRNA m6A37 methyltransferase gi|168826584|gb|ACA31955.1| methyltransferase small [Haemophilus somnus 2336] Length = 236 Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust. Identities = 31/86 (36%), Positives = 43/86 (50%), Gaps = 5/86 (5%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD--- 156 +LDLGTGTG + L L + SP + V++ A AK N + + + Q D Sbjct: 42 LLDLGTGTGLIALMLAQRSPEHCQISAVELDQLAYLQAKDNIQQSPWANKIKIFQQDIIV 101 Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDC 182 + E FDVI +NPPY + VDC Sbjct: 102 FAQDCEHKFDVITANPPYFKQG-VDC 126 >gi|257883803|ref|ZP_05663456.1| DNA-methyltransferase [Enterococcus faecium 1,231,501] gi|257819641|gb|EEV46789.1| DNA-methyltransferase [Enterococcus faecium 1,231,501] Length = 538 Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust. Identities = 29/96 (30%), Positives = 49/96 (51%), Gaps = 24/96 (25%) Query: 100 RILDLGTGTGAVCLALLKESP---------FFKGVGVDISCKALEIAKSNAVTNGVS--- 147 R+ D G+G++ L + KE P F+ G +++ +A+ N + +G++ Sbjct: 218 RVYDPTMGSGSLLLTVKKELPAGDKSGSVDFY---GQELNTTTYNLARMNLMMHGINYQN 274 Query: 148 ---ERFDTLQSDW-FSSVEGL-----FDVIVSNPPY 174 R DTL +DW F+ EG+ FD +V+NPPY Sbjct: 275 MNLRRADTLDADWPFAEKEGMQIPLKFDAVVANPPY 310 >gi|242277527|ref|YP_002989656.1| methyltransferase type 11 [Desulfovibrio salexigens DSM 2638] gi|242120421|gb|ACS78117.1| Methyltransferase type 11 [Desulfovibrio salexigens DSM 2638] Length = 241 Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust. Identities = 34/121 (28%), Positives = 58/121 (47%), Gaps = 9/121 (7%) Query: 60 FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119 F +R +P+ DS L S + + R+LDLGTG+G + L ++ Sbjct: 2 FEEIRNYFPRGLVQPQSGFRFSTDSLLISSFVSVPSQ--ARVLDLGTGSGVIPLGIMLRH 59 Query: 120 PFFKGV---GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS---SVEGLFDVIVSNPP 173 P KG+ G++I+ + A+ N G +E +Q + + + G +D++VSNPP Sbjct: 60 P-DKGLNITGLEINSDMVAAAEENVQKLGFAEEIGIVQGNVCTPDFAPAGSYDLVVSNPP 118 Query: 174 Y 174 Y Sbjct: 119 Y 119 >gi|172056131|ref|YP_001812591.1| methyltransferase small [Exiguobacterium sibiricum 255-15] gi|171988652|gb|ACB59574.1| methyltransferase small [Exiguobacterium sibiricum 255-15] Length = 198 Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust. Identities = 35/88 (39%), Positives = 50/88 (56%), Gaps = 8/88 (9%) Query: 87 AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146 AF+ P + ILD+G G G + ++L K + + V VD++ +ALE+A NA NGV Sbjct: 52 AFTEPDVSGA----ILDVGCGYGPMGISLAKTTGR-EAVLVDVNERALELAADNARANGV 106 Query: 147 SERFDTLQSDWFSSVEG-LFDVIVSNPP 173 S T SD ++ V G F IV+NPP Sbjct: 107 S--VTTGVSDGYAGVVGQTFAAIVTNPP 132 >gi|261206971|ref|ZP_05921660.1| methyltransferase [Enterococcus faecium TC 6] gi|260078599|gb|EEW66301.1| methyltransferase [Enterococcus faecium TC 6] Length = 201 Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust. Identities = 35/97 (36%), Positives = 54/97 (55%), Gaps = 8/97 (8%) Query: 78 TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137 + +L+D+ LP D +ILD+G G G + LAL + F + VDI+ +A+ +A Sbjct: 46 SRVLIDAFDWEELP-----DEGKILDVGCGYGPIGLALAFATQRFVEM-VDINERAVSLA 99 Query: 138 KSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPP 173 + NA N + E D QS+ + +V E + IVSNPP Sbjct: 100 QGNAKRNQI-EHVDIHQSNIYEAVHEETYAAIVSNPP 135 >gi|116749298|ref|YP_845985.1| hypothetical protein Sfum_1865 [Syntrophobacter fumaroxidans MPOB] gi|116698362|gb|ABK17550.1| SAM-dependent methyltransferase [Syntrophobacter fumaroxidans MPOB] Length = 389 Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust. Identities = 31/78 (39%), Positives = 47/78 (60%), Gaps = 5/78 (6%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+LDL TGA LA + + VGVD S +A++ A+SNA N V++R + ++S+ Sbjct: 219 RVLDLFCYTGAWGLAAARGGAS-RVVGVDASAEAVDQARSNAAANNVADRCEFIRSEALQ 277 Query: 160 SV----EGLFDVIVSNPP 173 + +G FDVIV +PP Sbjct: 278 YLRTLRKGDFDVIVLDPP 295 >gi|326332231|ref|ZP_08198511.1| putative methyltransferase small domain protein [Nocardioidaceae bacterium Broad-1] gi|325949937|gb|EGD41997.1| putative methyltransferase small domain protein [Nocardioidaceae bacterium Broad-1] Length = 202 Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust. Identities = 39/144 (27%), Positives = 65/144 (45%), Gaps = 6/144 (4%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 RILD+G G G + LA +P + GVD++ +A+ +A NA G+ +R+ Sbjct: 64 RILDMGCGYGIIGLACALAAPSAQVTGVDVNERAVLLANENAAKLGLGDRYRAAVPAEID 123 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 +D I SNPP + L + + PR++ DG + D + R L + Sbjct: 124 PGT-TYDEIWSNPPI--RIGKQALHELLLTWLPRLAPDGRAVMVVGKNLGGDSLQRWLGE 180 Query: 220 DGLCSVEIGYNQKVDVVRIFESRK 243 G + IG + R+ E+R+ Sbjct: 181 QGFPTERIGSAKG---FRVLETRR 201 >gi|148377473|ref|YP_001256349.1| DNA methylase [Mycoplasma agalactiae PG2] gi|148291519|emb|CAL58905.1| DNA methylase [Mycoplasma agalactiae PG2] Length = 261 Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust. Identities = 23/84 (27%), Positives = 46/84 (54%), Gaps = 7/84 (8%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 + R+L++GT GA+ + + + S K ++I KA ++A +N + N E+ + +Q+D+ Sbjct: 47 IKRMLEIGTNNGALSIFISERSKNLKIDAIEIQEKAAKLAANNVILNNKQEQINVIQADF 106 Query: 158 -------FSSVEGLFDVIVSNPPY 174 V+ ++ IV NPP+ Sbjct: 107 NDFYKEHTKLVKPKYEAIVCNPPF 130 >gi|307200046|gb|EFN80392.1| N(6)-adenine-specific DNA methyltransferase 1 [Harpegnathos saltator] Length = 217 Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust. Identities = 35/111 (31%), Positives = 57/111 (51%), Gaps = 8/111 (7%) Query: 72 FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL---LKESPFFKGVGVD 128 +EP ++ LL+D AL L +E V L++G+G+G V AL LK + + VD Sbjct: 17 YEPSEDSYLLID-ALEADLKVLEAMKPVICLEIGSGSGVVITALAMALKRHHSAQFIAVD 75 Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIES 177 I+ A + ++ N V + LQ + ++ G DVI+ NPPY+ + Sbjct: 76 INPDACRATRRTSLDNSVI--VNVLQMNLLDCIQIRGQVDVILFNPPYVAT 124 >gi|308273829|emb|CBX30430.1| hypothetical protein N47_Q17530 [uncultured Desulfobacterium sp.] Length = 248 Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust. Identities = 33/119 (27%), Positives = 57/119 (47%), Gaps = 10/119 (8%) Query: 60 FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119 F+N ++++ + R VDS L S + D ++LD+GTG G + L L + Sbjct: 17 FFNGKISIRQNKLGYR----FSVDSVLLASYVKSAAGD--KVLDIGTGCGIISLILAYRN 70 Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD----WFSSVEGLFDVIVSNPPY 174 P + G+++ ++A N N + E+ + +D S + G D+IV NPPY Sbjct: 71 PGIEIYGIEVQKSLADLAALNVKNNCMEEQIKIVYTDVKNLKKSMLSGSPDIIVCNPPY 129 >gi|253987968|ref|YP_003039324.1| 16S ribosomal RNA m2G1207 methyltransferase [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253779418|emb|CAQ82579.1| ribosomal rna small subunit methyltransferase c (rrna (guanine-n2-) methyltransferase) (16s rrna m2g1207 methyltransferase) [Photorhabdus asymbiotica] Length = 341 Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust. Identities = 37/139 (26%), Positives = 64/139 (46%), Gaps = 4/139 (2%) Query: 46 LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLG 105 L+HE + W + Y V T+ + + EL V S L S +K +LD+ Sbjct: 147 LEHEVLFEQDNWWNSYQVENTIVNTLPGVFSQNELDVGSRLLLS--TFDKPLSGNLLDIA 204 Query: 106 TGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF 165 G G + L K++P D++ A+ +K+ N + + + S+ +S++E F Sbjct: 205 CGAGVLAAVLGKKNPELALTLSDVNSAAIASSKATLKANKLEGK--VVVSNVYSNIEDKF 262 Query: 166 DVIVSNPPYIESVIVDCLG 184 D I+SNPP+ E + L Sbjct: 263 DWIISNPPFHEGLRTSLLA 281 >gi|271970460|ref|YP_003344656.1| methylase of polypeptide chain release factors-like protein [Streptosporangium roseum DSM 43021] gi|270513635|gb|ACZ91913.1| Methylase of polypeptide chain release factors- like protein [Streptosporangium roseum DSM 43021] Length = 480 Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust. Identities = 32/84 (38%), Positives = 47/84 (55%), Gaps = 4/84 (4%) Query: 95 KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154 +R V R LDLGTG G L L + V D++ +ALE+A+ + +G+ + D Q Sbjct: 138 RRPVERALDLGTGCGVQVLHLADRAREI--VATDVNPRALELARLSWALSGI-KGVDARQ 194 Query: 155 SDWFSSV-EGLFDVIVSNPPYIES 177 F V + FD+IVSNPP++ S Sbjct: 195 GSLFDPVADDRFDLIVSNPPFVIS 218 >gi|108760593|ref|YP_633081.1| methyltransferase [Myxococcus xanthus DK 1622] gi|108464473|gb|ABF89658.1| methyltransferase [Myxococcus xanthus DK 1622] Length = 385 Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust. Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 3/76 (3%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+ D+GTGTG + LL+ D +A+ ++ NA G+ +RF ++D F Sbjct: 207 RVFDIGTGTGVLSFILLQRG-AASVQATDCDSRAVACSQENAERLGLGKRFQVAEADLFP 265 Query: 160 SVEGLFDVIVSNPPYI 175 +G D++V NPP+I Sbjct: 266 --KGTADLVVCNPPWI 279 >gi|296131640|ref|YP_003638887.1| Methyltransferase type 11 [Thermincola sp. JR] gi|296030218|gb|ADG80986.1| Methyltransferase type 11 [Thermincola potens JR] Length = 253 Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust. Identities = 29/100 (29%), Positives = 53/100 (53%), Gaps = 6/100 (6%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 +D+ L + ++K D+ I+DLGTG+G + + L +G+DI +A++ A + Sbjct: 38 IDAVLLANFASVKKGDL--IVDLGTGSGVIPILLTTRQQVDHIIGIDIQAEAVDRAVRSV 95 Query: 142 VTNGVSERFDTLQSDW-FSSVE---GLFDVIVSNPPYIES 177 NG+ + D +S E G FD++ +NPPY+ + Sbjct: 96 AGNGLQGLITIREGDIRNASAELGLGKFDLVTANPPYLPA 135 >gi|164660454|ref|XP_001731350.1| hypothetical protein MGL_1533 [Malassezia globosa CBS 7966] gi|159105250|gb|EDP44136.1| hypothetical protein MGL_1533 [Malassezia globosa CBS 7966] Length = 198 Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust. Identities = 32/99 (32%), Positives = 45/99 (45%), Gaps = 14/99 (14%) Query: 107 GTGAVCLALLKESPFFKGV---GVDISCKALEIAKSNAVTNG-----------VSERFDT 152 GTG + L L K V VD ALE+A+ NA + VS R+ Sbjct: 92 GTGCIALTLAHGLRMHKDVHITAVDCDAAALELARENAKAHALDGDDDSDDALVSIRYAD 151 Query: 153 LQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFD 191 + D ++ G FD++V NPPYI + L VRD++ Sbjct: 152 MLDDHSMALLGSFDLVVCNPPYIAADAWQDLDASVRDYE 190 >gi|227356263|ref|ZP_03840652.1| methyltransferase [Proteus mirabilis ATCC 29906] gi|227163727|gb|EEI48643.1| methyltransferase [Proteus mirabilis ATCC 29906] Length = 252 Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust. Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 4/84 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 +LD+GTG+G + L L + +P + + G+++ A A+ NA + S D + Sbjct: 51 VLDIGTGSGLIALMLAQRAPQVERIDGIELDEDAALQARENAQQSQWSSLIHIYHHDIYQ 110 Query: 160 SVEGL---FDVIVSNPPYIESVIV 180 + +D+IVSNPPY E + Sbjct: 111 YAQQAPTRYDLIVSNPPYFEPAVA 134 >gi|154245322|ref|YP_001416280.1| methyltransferase small [Xanthobacter autotrophicus Py2] gi|154159407|gb|ABS66623.1| methyltransferase small [Xanthobacter autotrophicus Py2] Length = 256 Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust. Identities = 26/84 (30%), Positives = 44/84 (52%), Gaps = 9/84 (10%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R++DLGTG G+ LA L P V V+I+ + ++A+ NA N +S R + + +D Sbjct: 48 RMVDLGTGVGSCGLAFLTRVPQASSVLVEIAPELADLARENAALNDLSARVEVVTADVTR 107 Query: 160 SVE---------GLFDVIVSNPPY 174 G D++++NPP+ Sbjct: 108 LCRPSGPDVPQVGAADLVLTNPPF 131 >gi|242022790|ref|XP_002431821.1| N5-glutamine methyltransferase MTQ2, putative [Pediculus humanus corporis] gi|212517153|gb|EEB19083.1| N5-glutamine methyltransferase MTQ2, putative [Pediculus humanus corporis] Length = 205 Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust. Identities = 42/135 (31%), Positives = 68/135 (50%), Gaps = 14/135 (10%) Query: 72 FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL--LKESPFFKGVGVDI 129 +EP +T LL+D AL L I + IL++G+G+G + AL L +S + + +DI Sbjct: 14 YEPAEDTFLLLD-ALEKDLDYIISKKPATILEIGSGSGTIITALSTLLKSSY--HLAIDI 70 Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVR 188 + A + N+ N V D + +D S ++ DVI+ NPPY+ + E+ Sbjct: 71 NKYACSVTMQNSHYNKVI--VDVINTDLTSCLKLNCIDVIIFNPPYVVTP-----NDEIY 123 Query: 189 DFDPRI-SLDGGIDG 202 DP S GG++G Sbjct: 124 KEDPLTKSWAGGVNG 138 >gi|119489742|ref|ZP_01622500.1| UbiE/COQ5 methyltransferase [Lyngbya sp. PCC 8106] gi|119454316|gb|EAW35466.1| UbiE/COQ5 methyltransferase [Lyngbya sp. PCC 8106] Length = 219 Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust. Identities = 24/79 (30%), Positives = 42/79 (53%), Gaps = 8/79 (10%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS-----ERFDT 152 ++LD GTGT + + + ++ P ++ + +D+S L+I + N +GV ER D Sbjct: 42 TAQVLDAGTGTARIPILIAQQRPDWQIIAIDLSENMLKIGQQNVERSGVQTQVKLERVDA 101 Query: 153 LQSDWFSSVEGLFDVIVSN 171 Q +E FD+I+SN Sbjct: 102 KQ---LPYIEAQFDLIISN 117 >gi|257878705|ref|ZP_05658358.1| rRNA small subunit methyltransferase C [Enterococcus faecium 1,230,933] gi|257881346|ref|ZP_05660999.1| rRNA small subunit methyltransferase C [Enterococcus faecium 1,231,502] gi|257890564|ref|ZP_05670217.1| rRNA small subunit methyltransferase C [Enterococcus faecium 1,231,410] gi|260558265|ref|ZP_05830461.1| methyltransferase [Enterococcus faecium C68] gi|257812933|gb|EEV41691.1| rRNA small subunit methyltransferase C [Enterococcus faecium 1,230,933] gi|257817004|gb|EEV44332.1| rRNA small subunit methyltransferase C [Enterococcus faecium 1,231,502] gi|257826924|gb|EEV53550.1| rRNA small subunit methyltransferase C [Enterococcus faecium 1,231,410] gi|260075439|gb|EEW63745.1| methyltransferase [Enterococcus faecium C68] Length = 201 Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust. Identities = 35/97 (36%), Positives = 54/97 (55%), Gaps = 8/97 (8%) Query: 78 TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137 + +L+D+ LP D +ILD+G G G + LAL + F + VDI+ +A+ +A Sbjct: 46 SRVLIDAFDWEELP-----DEGKILDVGCGYGPIGLALAFATQRFVEM-VDINERAVSLA 99 Query: 138 KSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPP 173 + NA N + E D QS+ + +V E + IVSNPP Sbjct: 100 QGNAKRNQI-EHVDIHQSNIYEAVHEETYAAIVSNPP 135 >gi|226328150|ref|ZP_03803668.1| hypothetical protein PROPEN_02041 [Proteus penneri ATCC 35198] gi|225203854|gb|EEG86208.1| hypothetical protein PROPEN_02041 [Proteus penneri ATCC 35198] Length = 252 Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust. Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 4/88 (4%) Query: 97 DVVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQS 155 ++ R LD+GTG+G + L L + + + + G+++ KA A NA + S Sbjct: 48 NIKRALDIGTGSGLIALMLAQRANKVECIDGIELDEKAALQATENAQESQWHSLIHIYHS 107 Query: 156 D---WFSSVEGLFDVIVSNPPYIESVIV 180 D + + +D+IVSNPPY E I Sbjct: 108 DIHHYAEQAQNKYDLIVSNPPYFEPAIA 135 >gi|156089291|ref|XP_001612052.1| hypothetical protein [Babesia bovis T2Bo] gi|154799306|gb|EDO08484.1| conserved hypothetical protein [Babesia bovis] Length = 461 Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust. Identities = 37/146 (25%), Positives = 65/146 (44%), Gaps = 14/146 (9%) Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L LS+++ + ++ L D A L I K + V++LD+GTG + + + Sbjct: 157 LNLSNNSPDTSADSSELKDDASNMKLQNILKGERVKVLDIGTGANCIYPLIGSAEYGWSF 216 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFD-TLQSDWFSSVEGLF------DVIVSNPPYIES 177 + DI AL +AK N N +++ + LQ D G+ + + NPP+ S Sbjct: 217 IATDIDINALMLAKQNIQLNNMAKTVELRLQKDTLRMFTGVLMPHEFVHLTMCNPPFHSS 276 Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGL 203 L+ + +PR+S I+ L Sbjct: 277 -------LDQANLNPRVSTCATINEL 295 >gi|297243699|ref|ZP_06927630.1| 16S RNA G1207 methylase RsmC [Gardnerella vaginalis AMD] gi|296888450|gb|EFH27191.1| 16S RNA G1207 methylase RsmC [Gardnerella vaginalis AMD] Length = 233 Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust. Identities = 28/78 (35%), Positives = 42/78 (53%), Gaps = 4/78 (5%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 + LD+G G G + +A+ ESP + V VD++ +ALE+ + NA G+ +L D Sbjct: 85 KFLDIGCGWGPISIAMGLESPEAEIVAVDVNERALELTELNAKNAGLKHIRTSLVDDALK 144 Query: 160 SVEGL----FDVIVSNPP 173 L FD+I SNPP Sbjct: 145 ENNTLEFNNFDLIWSNPP 162 >gi|62390757|ref|YP_226159.1| rRNA or tRNA methylase [Corynebacterium glutamicum ATCC 13032] gi|21324687|dbj|BAB99310.1| Predicted rRNA or tRNA methylase [Corynebacterium glutamicum ATCC 13032] gi|41326095|emb|CAF20258.1| rRNA or tRNA methylase [Corynebacterium glutamicum ATCC 13032] Length = 511 Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust. Identities = 30/103 (29%), Positives = 51/103 (49%), Gaps = 5/103 (4%) Query: 74 PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133 P P+ L V +A L +LDLGTG+G L + + + D+ +A Sbjct: 134 PGPDHVLGVGAASLSLLQATPTSPTGSVLDLGTGSGIQVLG--QAGAAQEIIATDVHPRA 191 Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYI 175 L+ A++ V +G+ + ++ WF V G FD I++NPP++ Sbjct: 192 LDFAEATLVDSGIPTQL--VEGSWFEPVRGRTFDRIIANPPFV 232 >gi|87120957|ref|ZP_01076849.1| putative ribosomal RNA small subunit methyltransferase C [Marinomonas sp. MED121] gi|86163795|gb|EAQ65068.1| putative ribosomal RNA small subunit methyltransferase C [Marinomonas sp. MED121] Length = 352 Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust. Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 1/83 (1%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 R+LD G G G + + L + + +D S A+ K + NGVSE+ L S+ Sbjct: 209 ARMLDFGCGDGIISIWLAMHTNA-RITALDDSALAIAATKMSCEANGVSEKMTFLGSNGL 267 Query: 159 SSVEGLFDVIVSNPPYIESVIVD 181 + V+G F+ I SNPP+ + D Sbjct: 268 TEVKGRFNYIFSNPPFHKGTDTD 290 >gi|167034013|ref|YP_001669244.1| methyltransferase small [Pseudomonas putida GB-1] gi|166860501|gb|ABY98908.1| methyltransferase small [Pseudomonas putida GB-1] Length = 317 Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust. Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 1/78 (1%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 V +D+G G+G L + + + + VDI+ AL NA GV+ +SD Sbjct: 138 VQHAVDIGCGSGVGALLIARAAQHAQVCAVDINPMALRHTAINAALAGVAN-VSVERSDL 196 Query: 158 FSSVEGLFDVIVSNPPYI 175 + G FD+IV+NPPY+ Sbjct: 197 LDDIAGTFDLIVANPPYM 214 >gi|254169081|ref|ZP_04875918.1| methylase, putative [Aciduliprofundum boonei T469] gi|197621920|gb|EDY34498.1| methylase, putative [Aciduliprofundum boonei T469] Length = 165 Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust. Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 4/76 (5%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+L++GTG GA+ + K + VDI A+E + A + + +T SD F Sbjct: 10 RVLEVGTGNGAIAIECAKSGSSV--LAVDIDKDAVEKLREEAKIKNL--KIETRVSDLFE 65 Query: 160 SVEGLFDVIVSNPPYI 175 +V+G +D ++ NPPY+ Sbjct: 66 NVDGKYDTLIFNPPYL 81 >gi|19553121|ref|NP_601123.1| rRNA or tRNA methylase [Corynebacterium glutamicum ATCC 13032] Length = 509 Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust. Identities = 30/103 (29%), Positives = 51/103 (49%), Gaps = 5/103 (4%) Query: 74 PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133 P P+ L V +A L +LDLGTG+G L + + + D+ +A Sbjct: 132 PGPDHVLGVGAASLSLLQATPTSPTGSVLDLGTGSGIQVLG--QAGAAQEIIATDVHPRA 189 Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYI 175 L+ A++ V +G+ + ++ WF V G FD I++NPP++ Sbjct: 190 LDFAEATLVDSGIPTQL--VEGSWFEPVRGRTFDRIIANPPFV 230 >gi|121604208|ref|YP_981537.1| methyltransferase small [Polaromonas naphthalenivorans CJ2] gi|120593177|gb|ABM36616.1| methyltransferase small [Polaromonas naphthalenivorans CJ2] Length = 417 Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust. Identities = 35/104 (33%), Positives = 50/104 (48%), Gaps = 3/104 (2%) Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162 D+GTGTG + L S + V D+ +ALE A+ N + +Q+D F E Sbjct: 243 DIGTGTGVLSAVLALRSEVDQVVATDLDPRALECARENIYRLRLPNPVKVMQADLFP--E 300 Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206 G VIV NPP++ + L V D D R+ L G + GL + Sbjct: 301 GQASVIVCNPPWLPARPGSPLEGAVYDEDSRMLL-GFLKGLPAH 343 >gi|67536746|ref|XP_662147.1| hypothetical protein AN4543.2 [Aspergillus nidulans FGSC A4] gi|40741696|gb|EAA60886.1| hypothetical protein AN4543.2 [Aspergillus nidulans FGSC A4] Length = 423 Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust. Identities = 28/59 (47%), Positives = 39/59 (66%), Gaps = 3/59 (5%) Query: 87 AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG--VGVDISCKALEIAKSNAVT 143 A L IEK++ ILDLGTG G++ LALL++ F G VGVD S K++E+A+ +T Sbjct: 106 AKRLSEIEKKNQPSILDLGTGNGSM-LALLRKRGGFAGDMVGVDYSAKSVELARELQIT 163 >gi|261880672|ref|ZP_06007099.1| SAM-dependent methyltransferase [Prevotella bergensis DSM 17361] gi|270332625|gb|EFA43411.1| SAM-dependent methyltransferase [Prevotella bergensis DSM 17361] Length = 232 Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust. Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 1/79 (1%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+LD+G GTG V L L + P G++I +A E + N + ++R S + Sbjct: 37 RLLDIGAGTGLVSLMLAQRFPSATVEGLEIDAEAAEQCQENMAASPFADRVRVYVSAFQD 96 Query: 160 SV-EGLFDVIVSNPPYIES 177 V + +D IVSNPPY S Sbjct: 97 FVPDAPYDAIVSNPPYFLS 115 >gi|157960426|ref|YP_001500460.1| rRNA (guanine-N(2)-)-methyltransferase [Shewanella pealeana ATCC 700345] gi|226712997|sp|A8H038|RSMC_SHEPA RecName: Full=Ribosomal RNA small subunit methyltransferase C; AltName: Full=16S rRNA m2G1207 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rsmC gi|157845426|gb|ABV85925.1| rRNA (guanine-N(2)-)-methyltransferase [Shewanella pealeana ATCC 700345] Length = 341 Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust. Identities = 28/86 (32%), Positives = 41/86 (47%), Gaps = 6/86 (6%) Query: 89 SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148 +LP++ +LD G G G + ALLK P K VDI+ AL + NG + Sbjct: 197 NLPKMSGN----VLDFGCGAGVITAALLKAQPDLKLECVDINAMALASCELTLEANGFTA 252 Query: 149 RFDTLQSDWFSSVEGLFDVIVSNPPY 174 + SD + +D I+SNPP+ Sbjct: 253 K--VFASDGLAQTSQRYDGIISNPPF 276 >gi|86261634|emb|CAI47647.1| putative N-methyltransferase [Streptoalloteichus hindustanus] Length = 262 Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust. Identities = 30/77 (38%), Positives = 43/77 (55%), Gaps = 7/77 (9%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKG--VGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 VR +++G G A L KE G VG D+ +ALE+A+ NA + RF + SD Sbjct: 93 VRAVEIGCGAAAAICTLAKE---LTGEFVGTDVVPEALELAEENATRHRAPVRF--VVSD 147 Query: 157 WFSSVEGLFDVIVSNPP 173 F +++G FDVI +N P Sbjct: 148 LFDALDGRFDVIYANLP 164 >gi|283783064|ref|YP_003373818.1| methyltransferase small domain protein [Gardnerella vaginalis 409-05] gi|298253512|ref|ZP_06977302.1| 16S RNA G1207 methylase RsmC [Gardnerella vaginalis 5-1] gi|283441356|gb|ADB13822.1| methyltransferase small domain protein [Gardnerella vaginalis 409-05] gi|297532279|gb|EFH71167.1| 16S RNA G1207 methylase RsmC [Gardnerella vaginalis 5-1] Length = 232 Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust. Identities = 28/78 (35%), Positives = 42/78 (53%), Gaps = 4/78 (5%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 + LD+G G G + +A+ ESP + V VD++ +ALE+ + NA G+ +L D Sbjct: 85 KFLDIGCGWGPISIAMGLESPEAEIVAVDVNERALELTELNAKNAGLKHIRTSLVDDALK 144 Query: 160 SVEGL----FDVIVSNPP 173 L FD+I SNPP Sbjct: 145 ENNTLEFNNFDLIWSNPP 162 >gi|262037579|ref|ZP_06011035.1| ribosomal protein L11 methyltransferase [Leptotrichia goodfellowii F0264] gi|261748401|gb|EEY35784.1| ribosomal protein L11 methyltransferase [Leptotrichia goodfellowii F0264] Length = 310 Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust. Identities = 37/156 (23%), Positives = 71/156 (45%), Gaps = 27/156 (17%) Query: 57 WRDFY-------NVRLTLSSDTFEPRPETELL-VDSALAFSLPRIEKRDVV--------- 99 W+ ++ N+ + S D +EP +++ +D +AF E + Sbjct: 109 WKKYFHTAKITENIVIKPSWDEYEPVGNEKIIEIDPGMAFGTGTHETTSLCVEFLEKYSG 168 Query: 100 ---RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 ++LD+G G+G + L + K+ K G+DI K E+ K N N + E F+ + + Sbjct: 169 NKDKLLDIGCGSGILML-IGKKLGINKVTGIDIDEKVGEVVKENFAKNDIHENFEVIIGN 227 Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDP 192 + + +D+IVSN ++VD L ++D + Sbjct: 228 LVNDINEKYDIIVSN------ILVDVLTELLKDIEK 257 >gi|224498901|ref|ZP_03667250.1| hypothetical protein LmonF1_04038 [Listeria monocytogenes Finland 1988] Length = 201 Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust. Identities = 25/74 (33%), Positives = 41/74 (55%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 +ILD+G G G + L + K P + VD++ +ALE+AK NA N ++ + S + + Sbjct: 62 KILDVGCGYGPMGLTVAKAFPDSQIEMVDVNLRALELAKENAEINKITNTYIYESSVYDN 121 Query: 160 SVEGLFDVIVSNPP 173 + I+SNPP Sbjct: 122 VTANDYQAIISNPP 135 >gi|257464573|ref|ZP_05628944.1| hypothetical protein AM202_04940 [Actinobacillus minor 202] gi|257450233|gb|EEV24276.1| hypothetical protein AM202_04940 [Actinobacillus minor 202] Length = 233 Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust. Identities = 28/80 (35%), Positives = 44/80 (55%), Gaps = 2/80 (2%) Query: 97 DVVRILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155 +V RILD+GTG+G V L L + + + +++ A + A N + S R + + Sbjct: 38 NVQRILDMGTGSGLVALMLAQRTEERCQITALELEENAYQQAVENVKNSAWSARINVVHG 97 Query: 156 DWFSSV-EGLFDVIVSNPPY 174 D ++V FD+IVSNPPY Sbjct: 98 DVMNAVFSEKFDLIVSNPPY 117 >gi|283781797|ref|YP_003372552.1| methyltransferase small [Pirellula staleyi DSM 6068] gi|283440250|gb|ADB18692.1| methyltransferase small [Pirellula staleyi DSM 6068] Length = 336 Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust. Identities = 28/93 (30%), Positives = 44/93 (47%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 VD+ L +E R +LD+G G G V L + K P + +D +A+E +++A Sbjct: 182 VDAGARALLSAVEVRAGESVLDIGCGCGVVGLVICKRLPTATVLAIDSHSRAIECTQASA 241 Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174 N + + L S + FDV+ NPPY Sbjct: 242 ERNELPQLTARLDPSHKSVPDASFDVVAMNPPY 274 >gi|238899304|ref|YP_002924987.1| 16S RNA m2G1207 methylase [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|259495487|sp|C4K8X0|RSMC_HAMD5 RecName: Full=Ribosomal RNA small subunit methyltransferase C; AltName: Full=16S rRNA m2G1207 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rsmC gi|229467065|gb|ACQ68839.1| 16S RNA m2G1207 methylase [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 336 Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust. Identities = 25/87 (28%), Positives = 47/87 (54%), Gaps = 2/87 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LDL G G + L ++SP + D++ ALE +++N N + R + SD +S Sbjct: 199 KVLDLACGAGVLGTILARQSPQIELTLSDVNAAALESSRANLAVNHIKAR--VVPSDLYS 256 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLE 186 + F++I+SN P+ + + D +E Sbjct: 257 DIPERFNLILSNLPFHKGLKTDIKMIE 283 >gi|297561042|ref|YP_003680016.1| methyltransferase type 12 [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296845490|gb|ADH67510.1| Methyltransferase type 12 [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 251 Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust. Identities = 28/88 (31%), Positives = 47/88 (53%), Gaps = 3/88 (3%) Query: 84 SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143 + L L R+E R RI+D+G G + L L+ P G G+D+ +A+E ++NAV Sbjct: 25 AGLIRDLGRLEGR---RIVDIGCGWAELLLRALESEPTATGFGIDLDEQAVEHGRANAVA 81 Query: 144 NGVSERFDTLQSDWFSSVEGLFDVIVSN 171 G+++R + D + DV+V+N Sbjct: 82 RGLADRVELAVGDAGAWSGTHADVVVNN 109 >gi|308095311|ref|ZP_05904919.2| methyltransferase small [Vibrio parahaemolyticus Peru-466] gi|308125642|ref|ZP_05776410.2| methyltransferase small [Vibrio parahaemolyticus K5030] gi|308126588|ref|ZP_05911121.2| methyltransferase small [Vibrio parahaemolyticus AQ4037] gi|308088413|gb|EFO38108.1| methyltransferase small [Vibrio parahaemolyticus Peru-466] gi|308107655|gb|EFO45195.1| methyltransferase small [Vibrio parahaemolyticus AQ4037] gi|308113323|gb|EFO50863.1| methyltransferase small [Vibrio parahaemolyticus K5030] Length = 215 Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust. Identities = 29/86 (33%), Positives = 38/86 (44%), Gaps = 1/86 (1%) Query: 93 IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152 +E ILD+GTGTG + L + P K VDI A+E A N + +R Sbjct: 14 MESPSPAHILDIGTGTGLLALMCAQRFPDAKITAVDIETTAVEAASHNFSHSPWHDRLSV 73 Query: 153 LQSD-WFSSVEGLFDVIVSNPPYIES 177 +D S F IV NPPY + Sbjct: 74 QHTDVLIFSPPQRFQRIVCNPPYFNT 99 >gi|328886748|emb|CCA59987.1| possible methyltransferase [Streptomyces venezuelae ATCC 10712] Length = 240 Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust. Identities = 45/132 (34%), Positives = 59/132 (44%), Gaps = 15/132 (11%) Query: 72 FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131 + P+ +T LL A + R E R R LDL TGTG LAL+ + VDIS Sbjct: 34 YAPQADTGLL-----AAHVRREELRPGARSLDLCTGTG--VLALVAALRGARATAVDISR 86 Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDF 190 A+ +A+ NA + R TL D V FD++ NPPY+ S + Sbjct: 87 TAIAVARLNARLHRC--RIRTLCGDLDGPVAHERFDLVTVNPPYVPSADA-----QTPSR 139 Query: 191 DPRISLDGGIDG 202 R S D G DG Sbjct: 140 GARRSWDAGTDG 151 >gi|269120318|ref|YP_003308495.1| methyltransferase small [Sebaldella termitidis ATCC 33386] gi|268614196|gb|ACZ08564.1| methyltransferase small [Sebaldella termitidis ATCC 33386] Length = 228 Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust. Identities = 33/99 (33%), Positives = 52/99 (52%), Gaps = 10/99 (10%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 +DS L RI R V +ILD+GTG + L LL + + G++I + E+A N Sbjct: 28 LDSRLLSDFCRIN-RHVKKILDIGTGNAILPL-LLSQKSKAEITGIEILKISAELAVKNI 85 Query: 142 VTNGVSERFDTLQ------SDWFSSVEGLFDVIVSNPPY 174 N +S+R ++ +D+F E FD I++NPP+ Sbjct: 86 ELNNLSDRIKIIEGDIRKWADYFRPAE--FDQIITNPPF 122 >gi|302909366|ref|XP_003050057.1| hypothetical protein NECHADRAFT_105314 [Nectria haematococca mpVI 77-13-4] gi|256730994|gb|EEU44344.1| hypothetical protein NECHADRAFT_105314 [Nectria haematococca mpVI 77-13-4] Length = 271 Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust. Identities = 42/151 (27%), Positives = 66/151 (43%), Gaps = 30/151 (19%) Query: 76 PETEL-------LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL----ALLKESPFFKG 124 PETE L+ S + R + ++D +GTG + L +L + + Sbjct: 8 PETEAYTFHLVDLIKSGELLGKEWKKGRRGLNLIDFCSGTGCIPLGLFSSLWRSVAHLRV 67 Query: 125 VGVDISCKALEIAKSNAVTN---------GVSERFDTLQSDWFSS------VEGLFDVIV 169 GVDIS A ++A N N + + D FS + +DV+V Sbjct: 68 TGVDISPIASKLANENIARNIRLGNLPQPNEKQNLKIARGDVFSDSDMQQLADTRWDVLV 127 Query: 170 SNPPYIESVIVD----CLGLEVRDFDPRISL 196 SNPPYI + + + LGL VR ++PR++L Sbjct: 128 SNPPYISNDVWNHGRGQLGLSVRKYEPRLAL 158 >gi|163803378|ref|ZP_02197254.1| hypothetical protein 1103602000422_AND4_19002 [Vibrio sp. AND4] gi|159172840|gb|EDP57682.1| hypothetical protein AND4_19002 [Vibrio sp. AND4] Length = 239 Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust. Identities = 27/78 (34%), Positives = 37/78 (47%), Gaps = 1/78 (1%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS- 159 ILD+GTGTG + L + P +DI A+E A N + S+R +D Sbjct: 46 ILDIGTGTGLLALMCAQRFPSAHVTALDIEMSAIEAAHQNFAQSPWSDRLRLHYTDVLQF 105 Query: 160 SVEGLFDVIVSNPPYIES 177 E F+ I+ NPPY S Sbjct: 106 EPEQRFERIICNPPYFNS 123 >gi|145295822|ref|YP_001138643.1| hypothetical protein cgR_1747 [Corynebacterium glutamicum R] gi|140845742|dbj|BAF54741.1| hypothetical protein [Corynebacterium glutamicum R] Length = 525 Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust. Identities = 30/103 (29%), Positives = 51/103 (49%), Gaps = 5/103 (4%) Query: 74 PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133 P P+ L V +A L +LDLGTG+G L + + + D+ +A Sbjct: 148 PGPDHVLGVGAASLSLLQATPTSPTGSVLDLGTGSGIQVLG--QAGAAQEIIATDVHPRA 205 Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYI 175 L+ A++ V +G+ + ++ WF V G FD I++NPP++ Sbjct: 206 LDFAEATLVDSGIPTQL--VEGSWFEPVRGRTFDRIIANPPFV 246 >gi|86139017|ref|ZP_01057588.1| hypothetical protein MED193_10698 [Roseobacter sp. MED193] gi|85824248|gb|EAQ44452.1| hypothetical protein MED193_10698 [Roseobacter sp. MED193] Length = 268 Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust. Identities = 36/123 (29%), Positives = 57/123 (46%), Gaps = 12/123 (9%) Query: 59 DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118 DF R+ L ++PR VD L + I R R+L+LG G G L L + Sbjct: 24 DFLGGRVQL----WQPREGYRAGVDPVLLAAA--IPARAGERVLELGCGGGQAFLCLAER 77 Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPY 174 P GV++ +A+ NA NG S + +++D + + L FD +++NPPY Sbjct: 78 VPGLAITGVELQSDYAVLARRNAAHNGQS--VEVVEADLAALPKDLRQRQFDQVLANPPY 135 Query: 175 IES 177 + Sbjct: 136 YRA 138 >gi|325109882|ref|YP_004270950.1| rRNA (guanine-N(2)-)-methyltransferase [Planctomyces brasiliensis DSM 5305] gi|324970150|gb|ADY60928.1| rRNA (guanine-N(2)-)-methyltransferase [Planctomyces brasiliensis DSM 5305] Length = 366 Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust. Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 6/83 (7%) Query: 97 DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE----RFDT 152 D + +LDLG G GAV LA ++ + +D +A++ + NA N +SE RF T Sbjct: 225 DDMTVLDLGCGCGAVGLAAMRAAKNVDVTAIDSHARAIQCTEENAKRN-LSEDQLARFTT 283 Query: 153 -LQSDWFSSVEGLFDVIVSNPPY 174 L + E FD++ +NPPY Sbjct: 284 KLTHTATLAPEAKFDIVAANPPY 306 >gi|262383338|ref|ZP_06076474.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B] gi|301309389|ref|ZP_07215331.1| methyltransferase domain protein [Bacteroides sp. 20_3] gi|262294236|gb|EEY82168.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B] gi|300832478|gb|EFK63106.1| methyltransferase domain protein [Bacteroides sp. 20_3] Length = 258 Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust. Identities = 28/78 (35%), Positives = 39/78 (50%), Gaps = 4/78 (5%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ---SD 156 RILD+GTGTG + L L + S +DI A A+ N + + R Q S+ Sbjct: 61 RILDVGTGTGLIALMLAQRSTAILD-AIDIDSDACLQARENIAKSPFANRIQVYQTSLSE 119 Query: 157 WFSSVEGLFDVIVSNPPY 174 + +D+IVSNPPY Sbjct: 120 YMPDENIKYDLIVSNPPY 137 >gi|304405628|ref|ZP_07387287.1| methyltransferase small [Paenibacillus curdlanolyticus YK9] gi|304345667|gb|EFM11502.1| methyltransferase small [Paenibacillus curdlanolyticus YK9] Length = 204 Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust. Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 2/74 (2%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LD+G G G + L+ K + +DI+ +A+ +A+ NA NG+ + QSD + S Sbjct: 61 VLDVGCGYGPIGLSAAKLATKGHVTMIDINERAIALAQENAKLNGI-DNITVKQSDVYQS 119 Query: 161 V-EGLFDVIVSNPP 173 V E +D I++NPP Sbjct: 120 VRENRYDAILTNPP 133 >gi|291320135|ref|YP_003515393.1| DNA methylase [Mycoplasma agalactiae] gi|290752464|emb|CBH40436.1| DNA methylase [Mycoplasma agalactiae] Length = 261 Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust. Identities = 23/84 (27%), Positives = 45/84 (53%), Gaps = 7/84 (8%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 + R+L++GT GA+ + + + S K ++I KA ++A N + N E+ + +Q+D+ Sbjct: 47 IKRMLEIGTNNGALSIFISERSKNLKIDAIEIQEKAAKLATDNVIINNKQEQINVIQADF 106 Query: 158 -------FSSVEGLFDVIVSNPPY 174 V+ ++ IV NPP+ Sbjct: 107 NDFYKEHTKLVKPKYEAIVCNPPF 130 >gi|167571407|ref|ZP_02364281.1| protein hemK [Burkholderia oklahomensis C6786] Length = 103 Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust. Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 4/82 (4%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDR--QRFFLTNAIVRSLKHESIHRILGWRDFYNV 63 D+ L G + Q+I D LD +R+ A R E + ++ G R+F+ + Sbjct: 24 DARILLAHALGWTRTQLITRADEPLDAAAVERYLALEA--RRAAGEPVAQLTGAREFFGL 81 Query: 64 RLTLSSDTFEPRPETELLVDSA 85 ++ D PRPETELLV++A Sbjct: 82 EFEITPDVLIPRPETELLVETA 103 >gi|308050781|ref|YP_003914347.1| methyltransferase small [Ferrimonas balearica DSM 9799] gi|307632971|gb|ADN77273.1| methyltransferase small [Ferrimonas balearica DSM 9799] Length = 234 Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust. Identities = 30/84 (35%), Positives = 41/84 (48%), Gaps = 6/84 (7%) Query: 97 DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS- 155 D R+LDLGTG+G + L + S V++ A A++N + +ER +Q Sbjct: 34 DQGRVLDLGTGSGLLALMASQRSQAHI-TAVELDPDACRQAEANFAASPWTERLQLVQCD 92 Query: 156 --DWFSSVEGLFDVIVSNPPYIES 177 DW S FD IV NPPY S Sbjct: 93 VRDWHPSAP--FDAIVCNPPYFTS 114 >gi|308070985|ref|YP_003872590.1| hypothetical protein PPE_04288 [Paenibacillus polymyxa E681] gi|305860264|gb|ADM72052.1| Conserved hypothetical protein [Paenibacillus polymyxa E681] Length = 200 Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust. Identities = 29/74 (39%), Positives = 42/74 (56%), Gaps = 2/74 (2%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LD+G G G + L P VDI+ +A+++A NA NGV + QSD F+ Sbjct: 61 VLDVGCGYGPIGLTAAALVPEGHVTMVDINERAVQLAIENAERNGV-KNVTIKQSDLFAE 119 Query: 161 VEG-LFDVIVSNPP 173 V+ FDVI++NPP Sbjct: 120 VKNERFDVILTNPP 133 >gi|259482627|tpe|CBF77288.1| TPA: S-adenosylmethionine-dependent methyltransferase, putative (AFU_orthologue; AFUA_2G02750) [Aspergillus nidulans FGSC A4] Length = 327 Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust. Identities = 28/59 (47%), Positives = 39/59 (66%), Gaps = 3/59 (5%) Query: 87 AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG--VGVDISCKALEIAKSNAVT 143 A L IEK++ ILDLGTG G++ LALL++ F G VGVD S K++E+A+ +T Sbjct: 106 AKRLSEIEKKNQPSILDLGTGNGSM-LALLRKRGGFAGDMVGVDYSAKSVELARELQIT 163 >gi|257885613|ref|ZP_05665266.1| rRNA small subunit methyltransferase C [Enterococcus faecium 1,231,501] gi|257821469|gb|EEV48599.1| rRNA small subunit methyltransferase C [Enterococcus faecium 1,231,501] Length = 201 Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust. Identities = 34/97 (35%), Positives = 54/97 (55%), Gaps = 8/97 (8%) Query: 78 TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137 + +L+D+ LP D ++LD+G G G + LAL + F + VDI+ +A+ +A Sbjct: 46 SRVLIDAFDWEELP-----DEGKVLDVGCGYGPIGLALAFATQRFVEM-VDINERAVSLA 99 Query: 138 KSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPP 173 + NA N + E D QS+ + +V E + IVSNPP Sbjct: 100 QGNAKRNQI-EHVDIHQSNIYEAVHEETYAAIVSNPP 135 >gi|158321689|ref|YP_001514196.1| methyltransferase small [Alkaliphilus oremlandii OhILAs] gi|158141888|gb|ABW20200.1| methyltransferase small [Alkaliphilus oremlandii OhILAs] Length = 255 Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust. Identities = 26/98 (26%), Positives = 52/98 (53%), Gaps = 6/98 (6%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 +D+ L + ++K +++DLGTGTG + + L +S ++I + ++A+ + Sbjct: 32 IDAVLLANFVTLKKN--AKVVDLGTGTGIIPILLAGKSQTSHITALEIQKEVADMAQRSV 89 Query: 142 VTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPYI 175 N +++R L D + + L +DV+ SNPPY+ Sbjct: 90 QLNHLADRIHVLNMDLKDAEKNLDVNGYDVVTSNPPYM 127 >gi|302866075|ref|YP_003834712.1| methyltransferase [Micromonospora aurantiaca ATCC 27029] gi|302568934|gb|ADL45136.1| methyltransferase small [Micromonospora aurantiaca ATCC 27029] Length = 489 Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust. Identities = 28/75 (37%), Positives = 43/75 (57%), Gaps = 5/75 (6%) Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 LDLGTG+G L L + + D+S +AL A + A NG + ++ L+ D + V Sbjct: 155 LDLGTGSGVQALHLGTHA--RRVTATDVSERALRFAATTAALNG--QDWELLRGDMVAPV 210 Query: 162 EGL-FDVIVSNPPYI 175 G FD++VSNPP++ Sbjct: 211 AGRRFDLVVSNPPFV 225 >gi|224475689|ref|YP_002633295.1| putative rRNA methylase [Staphylococcus carnosus subsp. carnosus TM300] gi|222420296|emb|CAL27110.1| putative rRNA methylase [Staphylococcus carnosus subsp. carnosus TM300] Length = 201 Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust. Identities = 25/74 (33%), Positives = 44/74 (59%), Gaps = 2/74 (2%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 I+D+G G G + L + K SP K + +D++ +AL++AK N+ N + +SD + Sbjct: 64 IIDVGCGYGPIGLMIAKVSPHHKVILLDVNHRALDLAKENSEKNHIDNAV-IQESDGLAE 122 Query: 161 V-EGLFDVIVSNPP 173 + + D+IV+NPP Sbjct: 123 IPDDSADMIVTNPP 136 >gi|46906485|ref|YP_012874.1| hypothetical protein LMOf2365_0264 [Listeria monocytogenes serotype 4b str. F2365] gi|46879749|gb|AAT03051.1| conserved hypothetical protein [Listeria monocytogenes serotype 4b str. F2365] Length = 204 Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust. Identities = 26/74 (35%), Positives = 40/74 (54%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 +ILD+G G G + L + K P + VD++ +ALE+AK NA N ++ S + S Sbjct: 65 KILDVGCGYGPMGLTVAKAFPDSQIEMVDVNLRALELAKENAEINKITNTHIYESSVYDS 124 Query: 160 SVEGLFDVIVSNPP 173 + I+SNPP Sbjct: 125 VTANDYQAIISNPP 138 >gi|322703569|gb|EFY95176.1| hypothetical protein MAA_09381 [Metarhizium anisopliae ARSEF 23] Length = 222 Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust. Identities = 44/133 (33%), Positives = 62/133 (46%), Gaps = 15/133 (11%) Query: 62 NVRLTLSSDTFEPR--PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119 N L + + P+ PET +LP I K L++G G+G V L L Sbjct: 32 NFELQIHPSVYSPKYFPETLWY-----GQNLPSIVKGG--SFLEMGVGSGLVSLHLAASG 84 Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY-IESV 178 K +G DI+ A+E AK N N + F + SD F ++G FD I N P+ I+S Sbjct: 85 S--KVIGADINPFAVETAKGNFSRNRQAGTF--VVSDIFDQIDGKFDYIFWNHPWQIDSS 140 Query: 179 IVDCLGLEVRDFD 191 + D L E + FD Sbjct: 141 VPDELKTE-KTFD 152 >gi|254825704|ref|ZP_05230705.1| conserved hypothetical protein [Listeria monocytogenes FSL J1-194] gi|254991748|ref|ZP_05273938.1| hypothetical protein LmonocytoFSL_00527 [Listeria monocytogenes FSL J2-064] gi|255520714|ref|ZP_05387951.1| hypothetical protein LmonocFSL_05726 [Listeria monocytogenes FSL J1-175] gi|293594948|gb|EFG02709.1| conserved hypothetical protein [Listeria monocytogenes FSL J1-194] gi|328467861|gb|EGF38901.1| hypothetical protein LM1816_08950 [Listeria monocytogenes 1816] Length = 201 Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust. Identities = 26/74 (35%), Positives = 40/74 (54%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 +ILD+G G G + L + K P + VD++ +ALE+AK NA N ++ S + S Sbjct: 62 KILDVGCGYGPMGLTVAKAFPDSQIEMVDVNLRALELAKENAEINKITNTHIYESSVYDS 121 Query: 160 SVEGLFDVIVSNPP 173 + I+SNPP Sbjct: 122 VTANDYQAIISNPP 135 >gi|171058807|ref|YP_001791156.1| methyltransferase small [Leptothrix cholodnii SP-6] gi|170776252|gb|ACB34391.1| methyltransferase small [Leptothrix cholodnii SP-6] Length = 392 Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust. Identities = 35/104 (33%), Positives = 50/104 (48%), Gaps = 4/104 (3%) Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162 D+GTGTG V ALL V D +AL A N G + R + L++D F S Sbjct: 219 DIGTGTG-VLAALLVRRGVEHVVATDTDPRALACAADNLARLGCTARVELLKTDLFPS-- 275 Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206 G ++V NPP++ L + D D R+ L G + GL+ + Sbjct: 276 GRAPLVVCNPPWLPGKPSSALEHAIYDPDSRM-LRGFLSGLAAH 318 >gi|293394819|ref|ZP_06639109.1| SAM-dependent methyltransferase [Serratia odorifera DSM 4582] gi|291422570|gb|EFE95809.1| SAM-dependent methyltransferase [Serratia odorifera DSM 4582] Length = 251 Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust. Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 4/85 (4%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQS--- 155 ++LD+G G+G + L L + SP + V++ A E A+ N + + S+R Sbjct: 53 KVLDIGCGSGLIALMLAQRSPAEIHIDAVELDTAAAEQAQENVLQSPWSQRIRVYAQNIE 112 Query: 156 DWFSSVEGLFDVIVSNPPYIESVIV 180 D+ G + +IVSNPPY E + Sbjct: 113 DFAQRHAGRYALIVSNPPYFEPSVA 137 >gi|116747562|ref|YP_844249.1| methyltransferase small [Syntrophobacter fumaroxidans MPOB] gi|116696626|gb|ABK15814.1| methyltransferase small [Syntrophobacter fumaroxidans MPOB] Length = 211 Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust. Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 4/79 (5%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW-- 157 R++DLGTG + L + VGV++ + + +A+ N NG + L++D+ Sbjct: 14 RVVDLGTGCAVIPLIVAYRGQGRSVVGVELQPELVRLARKNVEVNGFVDSIRILEADFKE 73 Query: 158 --FSSVEGLFDVIVSNPPY 174 S G FD+++SNPPY Sbjct: 74 ITSSFPPGTFDLVLSNPPY 92 >gi|333030549|ref|ZP_08458610.1| tRNA (adenine-N(6)-)-methyltransferase [Bacteroides coprosuis DSM 18011] gi|332741146|gb|EGJ71628.1| tRNA (adenine-N(6)-)-methyltransferase [Bacteroides coprosuis DSM 18011] Length = 235 Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust. Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 1/75 (1%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW-FS 159 ILD+GTGTG + L L + + + ++I A+ AK N + +R + +QSD+ Sbjct: 41 ILDVGTGTGLIALMLAQRTVSAQIKALEIDEDAVIQAKENIERSPWKDRIEVIQSDFNLY 100 Query: 160 SVEGLFDVIVSNPPY 174 +D+IVSNPPY Sbjct: 101 EPNEKYDLIVSNPPY 115 >gi|302668597|ref|YP_003833045.1| type I restriction modification system M subunit HsdM [Butyrivibrio proteoclasticus B316] gi|302397561|gb|ADL36463.1| type I restriction modification system M subunit HsdM [Butyrivibrio proteoclasticus B316] Length = 531 Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust. Identities = 26/90 (28%), Positives = 44/90 (48%), Gaps = 9/90 (10%) Query: 94 EKRDVVRILDLGTGTGAV---CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150 E++ +++ D G+G++ C+ KE + K G ++ +A+ N +GV Sbjct: 214 EEKKGLQVYDPCMGSGSLMLSCMHYSKEPDYIKYYGQELMPSTYNLARMNMFLHGVLPEN 273 Query: 151 ------DTLQSDWFSSVEGLFDVIVSNPPY 174 DTL +DW + E FDV+ NPPY Sbjct: 274 QHLRNGDTLDADWPTDEETEFDVVTMNPPY 303 >gi|282878367|ref|ZP_06287159.1| methyltransferase small domain protein [Prevotella buccalis ATCC 35310] gi|281299553|gb|EFA91930.1| methyltransferase small domain protein [Prevotella buccalis ATCC 35310] Length = 232 Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust. Identities = 49/158 (31%), Positives = 75/158 (47%), Gaps = 21/158 (13%) Query: 100 RILDLGTGTGAVCLALLKE--SPFFKGVGVDI-SCKALEI-AKSNAVTNGVSERFDTLQS 155 RILD+GTGTG + L + + + F + + +D +C+ ++ +++ + V R LQ Sbjct: 38 RILDVGTGTGLIALMMAQRYAASFVEALEIDRDACRQAKVNVEASPFADRVRVREVALQQ 97 Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215 F SV+ FD IVSNPPY V+ L R D + S+ D LS Y+ + R Sbjct: 98 --FESVKQ-FDSIVSNPPY----FVEGL----RSPDAKRSMARHSDTLS-YKALCQSAYR 145 Query: 216 HLNKDGLCSV-----EIGYNQKVDVVRIFESRKLFLVN 248 L +G SV I V+ F RK +L+ Sbjct: 146 LLTNEGEMSVVLPVESIEQFSSTAVISGFYLRKKYLIK 183 >gi|260891354|ref|ZP_05902617.1| methyltransferase domain protein [Leptotrichia hofstadii F0254] gi|260858737|gb|EEX73237.1| methyltransferase domain protein [Leptotrichia hofstadii F0254] Length = 208 Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust. Identities = 27/84 (32%), Positives = 44/84 (52%), Gaps = 4/84 (4%) Query: 94 EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV----SER 149 +K +LD+G G G V + + K V D++ +ALE+ N + N V ++ Sbjct: 59 KKNQKFEVLDIGCGYGVVSVVMKAFFQKIKTVSSDVNERALELTTENLLKNEVVKDENDD 118 Query: 150 FDTLQSDWFSSVEGLFDVIVSNPP 173 F+ +S F ++ FDVI+SNPP Sbjct: 119 FEVRKSFVFDNISEKFDVILSNPP 142 >gi|15603704|ref|NP_246778.1| hypothetical protein PM1839 [Pasteurella multocida subsp. multocida str. Pm70] gi|81856689|sp|Q9CJZ9|TRMN6_PASMU RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName: Full=tRNA m6A37 methyltransferase gi|12722264|gb|AAK03923.1| unknown [Pasteurella multocida subsp. multocida str. Pm70] Length = 237 Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust. Identities = 31/87 (35%), Positives = 45/87 (51%), Gaps = 5/87 (5%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD-- 156 RILDLGTGTG + L L + S + V++ A A++N + ++R Q D Sbjct: 42 RILDLGTGTGLIALMLAQRSTKESEIHAVELDQAAYLQAQANVHASPWAQRVHVYQQDAA 101 Query: 157 -WFSSVEGLFDVIVSNPPYIESVIVDC 182 + + FD+IV+NPPY VDC Sbjct: 102 EFCRNAVNKFDLIVANPPYFPQG-VDC 127 >gi|170751715|ref|YP_001757975.1| methyltransferase small [Methylobacterium radiotolerans JCM 2831] gi|170658237|gb|ACB27292.1| methyltransferase small [Methylobacterium radiotolerans JCM 2831] Length = 252 Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust. Identities = 30/92 (32%), Positives = 44/92 (47%), Gaps = 7/92 (7%) Query: 93 IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF-- 150 + R R+ D+G GTGAV LA +P + V+ A++NA NG+ R Sbjct: 40 LAPRAGDRLCDVGAGTGAVGLACAALAPGLRPTLVERDPALAGQARANATLNGIDARVLV 99 Query: 151 -DTLQSDWFSSVEGL----FDVIVSNPPYIES 177 D L S GL FDV+++NPP+ + Sbjct: 100 ADVLASAAERRAAGLLPDSFDVVLTNPPFFAA 131 >gi|298376241|ref|ZP_06986197.1| methyltransferase small [Bacteroides sp. 3_1_19] gi|298267278|gb|EFI08935.1| methyltransferase small [Bacteroides sp. 3_1_19] Length = 218 Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust. Identities = 28/78 (35%), Positives = 39/78 (50%), Gaps = 4/78 (5%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ---SD 156 RILD+GTGTG + L L + S +DI A A+ N + + R Q S+ Sbjct: 21 RILDVGTGTGLIALMLAQRSTAILD-AIDIDLDACLQARENIAKSPFANRIQVYQTSLSE 79 Query: 157 WFSSVEGLFDVIVSNPPY 174 + +D+IVSNPPY Sbjct: 80 YMPDENIKYDLIVSNPPY 97 >gi|260102435|ref|ZP_05752672.1| methyltransferase domain protein [Lactobacillus helveticus DSM 20075] gi|260083755|gb|EEW67875.1| methyltransferase domain protein [Lactobacillus helveticus DSM 20075] Length = 209 Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust. Identities = 26/74 (35%), Positives = 42/74 (56%), Gaps = 1/74 (1%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ILD+GTG G + L K P VD++ + L++AK NA N +S + SD ++ Sbjct: 66 NILDVGTGYGPIGLLAAKFWPDQTVDMVDVNERGLKLAKQNAQVNHIS-NVNIYSSDCYT 124 Query: 160 SVEGLFDVIVSNPP 173 V+ + +I++NPP Sbjct: 125 QVDKKYGLILTNPP 138 >gi|254853481|ref|ZP_05242829.1| conserved hypothetical protein [Listeria monocytogenes FSL R2-503] gi|254932471|ref|ZP_05265830.1| conserved hypothetical protein [Listeria monocytogenes HPB2262] gi|300764623|ref|ZP_07074615.1| HemK family modification methylase [Listeria monocytogenes FSL N1-017] gi|258606853|gb|EEW19461.1| conserved hypothetical protein [Listeria monocytogenes FSL R2-503] gi|293584027|gb|EFF96059.1| conserved hypothetical protein [Listeria monocytogenes HPB2262] gi|300514730|gb|EFK41785.1| HemK family modification methylase [Listeria monocytogenes FSL N1-017] gi|328476090|gb|EGF46799.1| hypothetical protein LM220_01497 [Listeria monocytogenes 220] gi|332310662|gb|EGJ23757.1| Methyltransferase small domain superfamily [Listeria monocytogenes str. Scott A] Length = 201 Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust. Identities = 26/74 (35%), Positives = 40/74 (54%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 +ILD+G G G + L + K P + VD++ +ALE+AK NA N ++ S + S Sbjct: 62 KILDVGCGYGPMGLTVAKAFPDSQIEMVDVNLRALELAKENAEINKITNTHIYESSVYDS 121 Query: 160 SVEGLFDVIVSNPP 173 + I+SNPP Sbjct: 122 VTANDYQAIISNPP 135 >gi|184201225|ref|YP_001855432.1| putative methyltransferase [Kocuria rhizophila DC2201] gi|183581455|dbj|BAG29926.1| putative methyltransferase [Kocuria rhizophila DC2201] Length = 218 Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust. Identities = 37/115 (32%), Positives = 56/115 (48%), Gaps = 7/115 (6%) Query: 84 SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143 +AL S+P E R+ +LD+G G G + +AL + +P + VD++ ++L + NA Sbjct: 52 AALLRSVPDPEGRE---LLDIGCGWGPLTIALAQAAPEARVTAVDVNERSLRLTAENAAA 108 Query: 144 NGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG 198 G+S L D FD I SNPP V D L + + PR+S G Sbjct: 109 LGLSGVEALLPGD--VPAGRTFDTIWSNPPI--RVGKDALHEILATWLPRLSPGG 159 >gi|322515341|ref|ZP_08068337.1| metallothionein SmtA [Actinobacillus ureae ATCC 25976] gi|322118628|gb|EFX90850.1| metallothionein SmtA [Actinobacillus ureae ATCC 25976] Length = 236 Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust. Identities = 29/79 (36%), Positives = 41/79 (51%), Gaps = 2/79 (2%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 V +ILDLGTGTG V + L + + + +++ A + A N + S+R Q D Sbjct: 39 VEQILDLGTGTGLVAVMLAQRTAETTQITALELEPNAYQQAVENCQNSVFSDRLHVCQGD 98 Query: 157 WFS-SVEGLFDVIVSNPPY 174 E FD+IVSNPPY Sbjct: 99 VLQHHFEKKFDLIVSNPPY 117 >gi|256841493|ref|ZP_05547000.1| conserved hypothetical protein [Parabacteroides sp. D13] gi|256737336|gb|EEU50663.1| conserved hypothetical protein [Parabacteroides sp. D13] Length = 237 Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust. Identities = 28/78 (35%), Positives = 39/78 (50%), Gaps = 4/78 (5%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ---SD 156 RILD+GTGTG + L L + S +DI A A+ N + + R Q S+ Sbjct: 40 RILDVGTGTGLIALMLAQRSTAILD-AIDIDSDACLQARENIAKSPFANRIQVYQTSLSE 98 Query: 157 WFSSVEGLFDVIVSNPPY 174 + +D+IVSNPPY Sbjct: 99 YMPDENIKYDLIVSNPPY 116 >gi|84495067|ref|ZP_00994186.1| putative transferase [Janibacter sp. HTCC2649] gi|84384560|gb|EAQ00440.1| putative transferase [Janibacter sp. HTCC2649] Length = 495 Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust. Identities = 46/131 (35%), Positives = 59/131 (45%), Gaps = 12/131 (9%) Query: 95 KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154 +R V LD+GTG G L L + V D+S +AL A+ NA N V +D Sbjct: 152 RRPVGAALDVGTGCGVQALHLGAHTDSI--VATDLSERALAFARFNANLNEV--EWDVRA 207 Query: 155 SDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213 V G FD+IVSNPP+ VI G EV F+ R DGG G + + V Sbjct: 208 GSMLDPVAGQRFDLIVSNPPF---VITPRSG-EVPLFEYR---DGGASGDAIVANLVRSV 260 Query: 214 SRHLNKDGLCS 224 HL G+ Sbjct: 261 GEHLEPGGVAQ 271 >gi|116670926|ref|YP_831859.1| methyltransferase small [Arthrobacter sp. FB24] gi|116611035|gb|ABK03759.1| 23S rRNA m(2)G-1835 methyltransferase / 16S rRNA m(2)G 1207 methyltransferase [Arthrobacter sp. FB24] Length = 382 Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust. Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 1/75 (1%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 ++DLG GTG + K P K D S A++ A++ A NG+ R LQ D SS Sbjct: 238 VVDLGCGTGILAAMYAKSHPESKVTATDQSAAAVDSARATAEANGLGGRVTVLQDDAMSS 297 Query: 161 V-EGLFDVIVSNPPY 174 + + +I+ NPP+ Sbjct: 298 LPDSSAGLILLNPPF 312 >gi|302206342|gb|ADL10684.1| Putative methyltransferase [Corynebacterium pseudotuberculosis C231] gi|308276584|gb|ADO26483.1| Putative methyltransferase [Corynebacterium pseudotuberculosis I19] Length = 508 Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust. Identities = 28/83 (33%), Positives = 45/83 (54%), Gaps = 7/83 (8%) Query: 95 KRDVVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTL 153 + V +LDLG+G+G + L ++P + DI +AL+ A++N+ N V + Sbjct: 154 RTPVHTLLDLGSGSG---IQALGQAPHAHTIIATDIHDRALDFAEANSAANKVP--LEIR 208 Query: 154 QSDWFSSVEG-LFDVIVSNPPYI 175 WF V G FD IV+NPP++ Sbjct: 209 SGSWFDPVAGEKFDRIVANPPFV 231 >gi|85058367|ref|YP_454069.1| 16S ribosomal RNA m2G1207 methyltransferase [Sodalis glossinidius str. 'morsitans'] gi|123520122|sp|Q2NW11|RSMC_SODGM RecName: Full=Ribosomal RNA small subunit methyltransferase C; AltName: Full=16S rRNA m2G1207 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rsmC gi|84778887|dbj|BAE73664.1| ribosomal RNA small subunit methyltransferase C [Sodalis glossinidius str. 'morsitans'] Length = 350 Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust. Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 2/74 (2%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 + D+G GTG + L K + + D AL +++ NG+ + + L D +S+ Sbjct: 201 VADIGCGTGVLSAVLAKGAAGVQLTLSDAHAPALAASRATLAVNGL--QGEVLAGDVYSA 258 Query: 161 VEGLFDVIVSNPPY 174 + G FD+I+SNPP+ Sbjct: 259 ISGRFDMIISNPPF 272 >gi|46124879|ref|XP_386993.1| hypothetical protein FG06817.1 [Gibberella zeae PH-1] Length = 288 Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust. Identities = 39/121 (32%), Positives = 58/121 (47%), Gaps = 23/121 (19%) Query: 99 VRILDLGTGTGAVCLAL---LKESPFFKGV-GVDISCKALEIAKSNAVTN---------G 145 V ++D TGTG + L L+ S V GVDIS AL +A+ N N Sbjct: 57 VNLIDFCTGTGCIPLGFFSSLQHSVQNMTVRGVDISPVALRLAQENIARNVELQKLIKPT 116 Query: 146 VSERFDTLQSDWFSSVE------GLFDVIVSNPPYIESVIVD----CLGLEVRDFDPRIS 195 ++R D ++ FS + +D++VSNPPYI + LG VR ++PR++ Sbjct: 117 RNKRLDITTANVFSDSDMQQLAVTRWDILVSNPPYISEDVWHHGRGQLGYSVRKYEPRLA 176 Query: 196 L 196 L Sbjct: 177 L 177 >gi|300858633|ref|YP_003783616.1| hypothetical protein cpfrc_01216 [Corynebacterium pseudotuberculosis FRC41] gi|300686087|gb|ADK29009.1| hypothetical protein cpfrc_01216 [Corynebacterium pseudotuberculosis FRC41] gi|302330899|gb|ADL21093.1| Putative methyltransferase [Corynebacterium pseudotuberculosis 1002] Length = 508 Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust. Identities = 28/83 (33%), Positives = 45/83 (54%), Gaps = 7/83 (8%) Query: 95 KRDVVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTL 153 + V +LDLG+G+G + L ++P + DI +AL+ A++N+ N V + Sbjct: 154 RTPVHTLLDLGSGSG---IQALGQAPHAHTIIATDIHDRALDFAEANSAANKVP--LEIR 208 Query: 154 QSDWFSSVEG-LFDVIVSNPPYI 175 WF V G FD IV+NPP++ Sbjct: 209 SGSWFDPVAGEKFDRIVANPPFV 231 >gi|293391527|ref|ZP_06635861.1| phosphatidylserine synthase [Aggregatibacter actinomycetemcomitans D7S-1] gi|290952061|gb|EFE02180.1| phosphatidylserine synthase [Aggregatibacter actinomycetemcomitans D7S-1] Length = 232 Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust. Identities = 28/87 (32%), Positives = 47/87 (54%), Gaps = 5/87 (5%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD-- 156 +ILDLG G+G + L L + S + V+I A + A+ N + ++ Q D Sbjct: 37 QILDLGCGSGLIALMLAQRSSAESRICAVEIDPAAAQQAQENVSASPWKDKIQVYQQDIE 96 Query: 157 -WFSSVEGLFDVIVSNPPYIESVIVDC 182 + + + +FD+IV+NPPY ++ VDC Sbjct: 97 TFCAQSKHVFDLIVANPPYFQTG-VDC 122 >gi|66801729|ref|XP_629789.1| hypothetical protein DDB_G0292048 [Dictyostelium discoideum AX4] gi|60463187|gb|EAL61380.1| hypothetical protein DDB_G0292048 [Dictyostelium discoideum AX4] Length = 257 Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust. Identities = 44/164 (26%), Positives = 74/164 (45%), Gaps = 18/164 (10%) Query: 70 DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK-----ESPFFKG 124 D +EP ++ L +DS L I++ +L++G+G+G V L K S ++ Sbjct: 28 DVYEPSEDSYLFIDS-LQKDYENIKEMKPFIMLEIGSGSGFVITFLAKLLGNDGSKYY-- 84 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVIVD 181 + DI+ KA + ++ N V D L + + SS+E G D+++ NPPY V Sbjct: 85 MSTDINPKAAIASSKTSIENNV--HLDVLNTSFVSSIERLKGSIDILLFNPPY-----VP 137 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225 EV + S GGI+G + + L+K G + Sbjct: 138 TPSEEVNEGGIVASWAGGINGREVIDKLLPQIPSILSKKGFFYI 181 >gi|296333103|ref|ZP_06875557.1| ribosomal RNA methyltransferase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305672805|ref|YP_003864476.1| ribosomal RNA methyltransferase [Bacillus subtilis subsp. spizizenii str. W23] gi|296149719|gb|EFG90614.1| ribosomal RNA methyltransferase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305411048|gb|ADM36166.1| ribosomal RNA methyltransferase [Bacillus subtilis subsp. spizizenii str. W23] Length = 201 Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust. Identities = 33/98 (33%), Positives = 53/98 (54%), Gaps = 10/98 (10%) Query: 78 TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137 + LL+DS F P +E ILD+G G G + L+L + +D++ +A+E++ Sbjct: 46 SRLLIDS---FEEPEVEGS----ILDVGCGYGPIGLSLASDFKDRTIHMIDVNERAVELS 98 Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPP 173 NA NG++ QSD FS+V+ F I++NPP Sbjct: 99 NENAEQNGIT-NVKIYQSDMFSNVDSAQTFASILTNPP 135 >gi|221068627|ref|ZP_03544732.1| methyltransferase small [Comamonas testosteroni KF-1] gi|220713650|gb|EED69018.1| methyltransferase small [Comamonas testosteroni KF-1] Length = 404 Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust. Identities = 35/114 (30%), Positives = 53/114 (46%), Gaps = 4/114 (3%) Query: 93 IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152 I + + D+G GTG + LLK V D S +AL A N G + R + Sbjct: 220 IPAAGLQQAWDIGVGTGVLSALLLKRG-VKSVVATDTSERALACATENLQRLGHASRVEL 278 Query: 153 LQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206 ++D F+ +G +IV NPP++ L + D D R+ L G + GLS + Sbjct: 279 QRADLFA--QGQAGLIVCNPPWLPGKAASVLDQAIYDEDSRM-LRGFLQGLSAH 329 >gi|328462871|gb|EGF34720.1| hypothetical protein AAULH_02188 [Lactobacillus helveticus MTCC 5463] Length = 209 Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust. Identities = 26/74 (35%), Positives = 42/74 (56%), Gaps = 1/74 (1%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ILD+GTG G + L K P VD++ + L++AK NA N +S + SD ++ Sbjct: 66 NILDVGTGYGPIGLLAAKFWPDQTVDMVDVNERGLKLAKQNAQVNHIS-NVNIYSSDCYA 124 Query: 160 SVEGLFDVIVSNPP 173 V+ + +I++NPP Sbjct: 125 QVDKKYGLILTNPP 138 >gi|269114910|ref|YP_003302673.1| DNA methylase [Mycoplasma hominis] gi|268322535|emb|CAX37270.1| DNA methylase [Mycoplasma hominis ATCC 23114] Length = 260 Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust. Identities = 24/90 (26%), Positives = 45/90 (50%), Gaps = 11/90 (12%) Query: 96 RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155 R V IL++GT GA+ + + ++I KA+E+A+ N + N + + + ++ Sbjct: 42 RKVRNILEVGTNNGALSIFIAARDKRLNIDAIEIQSKAVELARKNIILNKLENQINLIEG 101 Query: 156 D---WFSS--------VEGLFDVIVSNPPY 174 D W + + +D+IV+NPPY Sbjct: 102 DFRMWANQKAYDCGNKLAKKYDLIVANPPY 131 >gi|189211648|ref|XP_001942153.1| methyltransferase MppJ [Pyrenophora tritici-repentis Pt-1C-BFP] gi|189211670|ref|XP_001942164.1| methyltransferase MppJ [Pyrenophora tritici-repentis Pt-1C-BFP] gi|189212161|ref|XP_001942406.1| methyltransferase MppJ [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187979352|gb|EDU45978.1| methyltransferase MppJ [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187979363|gb|EDU45989.1| methyltransferase MppJ [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187979605|gb|EDU46231.1| methyltransferase MppJ [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 340 Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust. Identities = 44/163 (26%), Positives = 72/163 (44%), Gaps = 19/163 (11%) Query: 83 DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142 D A ++ I+ + + ++DLG+G+G + +L+ P G+GVDI+ + E+A+S+A+ Sbjct: 139 DPAFWLAMDGIDYK-IHSVVDLGSGSGERLMEILERYPGTVGLGVDIAKPSTEVARSDAI 197 Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202 G +R S V G + + + ++ C + DF PR + I Sbjct: 198 KRGFGDR--------LSFVVGDVRALSYRDEFAQVDLLTCFMMG-HDFWPR---ENCIAT 245 Query: 203 LSHYRTIADGVSRHLNKDGLC------SVEIGYNQKVDVVRIF 239 L RT V R L DG Y+ VD V IF Sbjct: 246 LQKLRTAFPKVRRFLLGDGTRILLNTDKTHCKYSTNVDNVPIF 288 >gi|118463475|ref|YP_882748.1| thiopurine S-methyltransferase (tpmt) superfamily protein [Mycobacterium avium 104] gi|118164762|gb|ABK65659.1| thiopurine S-methyltransferase (tpmt) superfamily protein [Mycobacterium avium 104] Length = 250 Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust. Identities = 38/122 (31%), Positives = 52/122 (42%), Gaps = 19/122 (15%) Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRD------VVR-----------ILDLGTG 107 +T S D +P E+ D + LP D VVR +LD GTG Sbjct: 1 MTASFDPADPARFEEMYRDQRTSHGLPAATPWDIGGPQPVVRQLVALGAVKGEVLDPGTG 60 Query: 108 TGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDV 167 G A+ S F G+D S A+E A++NA T GVS F+ + +G FD Sbjct: 61 PG--HHAIYYASQGFSATGIDGSAAAIERARANARTAGVSVNFELADATKLDGFDGRFDT 118 Query: 168 IV 169 +V Sbjct: 119 VV 120 >gi|262831379|sp|A8AD10|TRMN6_CITK8 RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName: Full=tRNA m6A37 methyltransferase Length = 245 Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust. Identities = 29/89 (32%), Positives = 44/89 (49%), Gaps = 5/89 (5%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 V RILD+GTG+G + L L + + + V++ +A A+ N + +R D Sbjct: 45 VTRILDIGTGSGLLALMLAQRTDESVTIDAVELDSEAATQAQENIAHSPWPQRITVHTED 104 Query: 157 ---WFSSVEGLFDVIVSNPPYIESVIVDC 182 W FD+I+SNPPY E V+C Sbjct: 105 VRQWVPRQTARFDLIISNPPYYEQG-VEC 132 >gi|170761794|ref|YP_001787475.1| type I restriction-modification system, M subunit [Clostridium botulinum A3 str. Loch Maree] gi|169408783|gb|ACA57194.1| type I restriction-modification system, M subunit [Clostridium botulinum A3 str. Loch Maree] Length = 511 Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust. Identities = 27/95 (28%), Positives = 49/95 (51%), Gaps = 4/95 (4%) Query: 84 SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143 S + L + K+D+ + D G+G++ L + KE+ G +++ +A+ N + Sbjct: 207 SKILAKLVTVGKKDLKSVYDPACGSGSLLLRVSKEANVRYFYGQELTSTTYNLARMNMLL 266 Query: 144 NGVS-ERFDTLQSDWFSSVEGL---FDVIVSNPPY 174 + +S ERFD D + E + FD +V+NPPY Sbjct: 267 HDISYERFDIRNDDTLENPEHIDMKFDAVVANPPY 301 >gi|309378625|emb|CBX22803.1| unnamed protein product [Neisseria lactamica Y92-1009] Length = 367 Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust. Identities = 37/129 (28%), Positives = 62/129 (48%), Gaps = 21/129 (16%) Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 LD+GTG+G V A+L + +G D + +A+ A++N G+ ++ + ++D F + Sbjct: 193 LDIGTGSG-VLAAILAKQGIPSVIGTDTNPRAVACARANIARLGLEKQVEIRETDMFPDM 251 Query: 162 EGLFDVIVSNPPY--------IESVIVD----CLGLEVRDFDPRISLDGGIDGLSHYRTI 209 D+IV NPP+ IES + D L +RD ++ DG I R I Sbjct: 252 RA--DLIVCNPPWLPAKPTSAIESALYDPDSAMLAAFLRDAPKHLNPDGEI------RLI 303 Query: 210 ADGVSRHLN 218 ++ HL Sbjct: 304 ISDLAEHLG 312 >gi|46198605|ref|YP_004272.1| ribosomal protein L11 methyltransferase [Thermus thermophilus HB27] gi|46196228|gb|AAS80645.1| ribosomal protein L11 methyltransferase [Thermus thermophilus HB27] Length = 254 Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust. Identities = 38/96 (39%), Positives = 52/96 (54%), Gaps = 10/96 (10%) Query: 77 ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136 ET L ALA L R ++LDLGTG+G LA+ E K +GVDI L Sbjct: 105 ETTRLALKALARHL-----RPGDKVLDLGTGSG--VLAIAAEKLGGKALGVDIDPMVLPQ 157 Query: 137 AKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSN 171 A++NA NGV RF L+ +++ G FD++V+N Sbjct: 158 AEANAKRNGVRPRF--LEGSLEAALPFGPFDLLVAN 191 >gi|159112999|ref|XP_001706727.1| DNA methyltransferase [Giardia lamblia ATCC 50803] gi|157434826|gb|EDO79053.1| DNA methyltransferase [Giardia lamblia ATCC 50803] Length = 220 Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust. Identities = 49/170 (28%), Positives = 75/170 (44%), Gaps = 16/170 (9%) Query: 61 YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120 Y L + P +T LL+D+ S + + V I G+G+G V + +L+ P Sbjct: 5 YEATLDDCKHVYLPDEDTFLLIDTLTKLS-GELHPQSFVEI---GSGSGVVSVHILQVFP 60 Query: 121 FFK-GVGVDISCKALEIAKSNAVTNGVS------ERFDTLQSDWFSSVEGLFDVIVSNPP 173 + G VDIS A+++ + A N V F+ L + SS FD+IV NPP Sbjct: 61 GIREGHAVDISPHAVDMTRRTASLNNVPLCVHEGSFFEPLDAYTNSSKATRFDLIVFNPP 120 Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223 Y+ S D L D ++L GG +G + + +L DG C Sbjct: 121 YVPSSETDP-ALGPLD----LALAGGKNGSEVMLKFFELLPSYLALDGHC 165 >gi|255014290|ref|ZP_05286416.1| hypothetical protein B2_10291 [Bacteroides sp. 2_1_7] Length = 237 Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust. Identities = 28/78 (35%), Positives = 39/78 (50%), Gaps = 4/78 (5%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ---SD 156 RILD+GTGTG + L L + S +DI A A+ N + + R Q S+ Sbjct: 40 RILDVGTGTGLIALMLAQRSTAILD-AIDIDLDACLQARENIAKSPFANRIQVYQTSLSE 98 Query: 157 WFSSVEGLFDVIVSNPPY 174 + +D+IVSNPPY Sbjct: 99 YMPDENIKYDLIVSNPPY 116 >gi|157144490|ref|YP_001451809.1| hypothetical protein CKO_00207 [Citrobacter koseri ATCC BAA-895] gi|157081695|gb|ABV11373.1| hypothetical protein CKO_00207 [Citrobacter koseri ATCC BAA-895] Length = 219 Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust. Identities = 29/89 (32%), Positives = 44/89 (49%), Gaps = 5/89 (5%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 V RILD+GTG+G + L L + + + V++ +A A+ N + +R D Sbjct: 19 VTRILDIGTGSGLLALMLAQRTDESVTIDAVELDSEAATQAQENIAHSPWPQRITVHTED 78 Query: 157 ---WFSSVEGLFDVIVSNPPYIESVIVDC 182 W FD+I+SNPPY E V+C Sbjct: 79 VRQWVPRQTARFDLIISNPPYYEQG-VEC 106 >gi|239941397|ref|ZP_04693334.1| putative methyltransferase [Streptomyces roseosporus NRRL 15998] gi|239987862|ref|ZP_04708526.1| putative methyltransferase [Streptomyces roseosporus NRRL 11379] gi|291444842|ref|ZP_06584232.1| methyltransferase [Streptomyces roseosporus NRRL 15998] gi|291347789|gb|EFE74693.1| methyltransferase [Streptomyces roseosporus NRRL 15998] Length = 306 Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust. Identities = 27/71 (38%), Positives = 38/71 (53%) Query: 97 DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 DV I+DLG+GTG ALL++ P + VD S LE S A G+ R TL++D Sbjct: 67 DVRHIVDLGSGTGTGTFALLEQFPTARVTAVDSSPAMLERLVSAARERGLGNRVRTLEAD 126 Query: 157 WFSSVEGLFDV 167 + + G+ D Sbjct: 127 AGAGLPGVADA 137 >gi|55980625|ref|YP_143922.1| ribosomal protein L11 methyltransferase [Thermus thermophilus HB8] gi|62297879|sp|Q84BQ9|PRMA_THET8 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11 Mtase gi|39654915|pdb|1UFK|A Chain A, Crystal Structure Of Tt0836 gi|122921161|pdb|2NXE|A Chain A, T. Thermophilus Ribosomal Protein L11 Methyltransferase (Prma) In Complex With S-Adenosyl-L-Methionine gi|122921162|pdb|2NXE|B Chain B, T. Thermophilus Ribosomal Protein L11 Methyltransferase (Prma) In Complex With S-Adenosyl-L-Methionine gi|122921165|pdb|2NXJ|A Chain A, T.Thermophilus Ribosomal Protein L11 Methyltransferase (Prma) In Space Group P 21 21 2 gi|122921166|pdb|2NXJ|B Chain B, T.Thermophilus Ribosomal Protein L11 Methyltransferase (Prma) In Space Group P 21 21 2 gi|122921168|pdb|2NXN|A Chain A, T. Thermophilus Ribosomal Protein L11 Methyltransferase (Prma) In Complex With Ribosomal Protein L11 gi|134104999|pdb|2NXC|A Chain A, Apo-Form Of T. Thermophilus Ribosomal Protein L11 Methyltransferase (Prma) gi|188596410|pdb|3CJQ|A Chain A, Ribosomal Protein L11 Methyltransferase (Prma) In Complex With Dimethylated Ribosomal Protein L11 In Space Group P212121 gi|188596412|pdb|3CJQ|D Chain D, Ribosomal Protein L11 Methyltransferase (Prma) In Complex With Dimethylated Ribosomal Protein L11 In Space Group P212121 gi|188596414|pdb|3CJQ|G Chain G, Ribosomal Protein L11 Methyltransferase (Prma) In Complex With Dimethylated Ribosomal Protein L11 In Space Group P212121 gi|188596416|pdb|3CJR|A Chain A, Ribosomal Protein L11 Methyltransferase (Prma) In Complex With Ribosomal Protein L11 (K39a) And Inhibitor Sinefungin. gi|188596437|pdb|3CJU|A Chain A, Ribosomal Protein L11 Methyltransferase (Prma) In Complex With Trimethylated Ribosomal Protein L11 gi|206582140|pdb|3EGV|A Chain A, Ribosomal Protein L11 Methyltransferase (Prma) In Complex With Trimethylated Ribosomal Protein L11 gi|212374912|pdb|2ZBP|A Chain A, Crystal Structure Of Ribosomal Protein L11 Methyltransferase From Thermus Thermophilus In Complex With S-Adenosyl-L-Methionine gi|212374913|pdb|2ZBQ|A Chain A, Crystal Structure Of Ribosomal Protein L11 Methyltransferase From Thermus Thermophilus In Complex With S-Adenosyl-L-Homocysteine gi|212374914|pdb|2ZBR|A Chain A, Crystal Structure Of Ribosomal Protein L11 Methyltransferase From Thermus Thermophilus In Complex With S-Adenosyl-Ornithine gi|55772038|dbj|BAD70479.1| ribosomal protein L11 methyltransferase [Thermus thermophilus HB8] Length = 254 Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust. Identities = 38/96 (39%), Positives = 52/96 (54%), Gaps = 10/96 (10%) Query: 77 ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136 ET L ALA L R ++LDLGTG+G LA+ E K +GVDI L Sbjct: 105 ETTRLALKALARHL-----RPGDKVLDLGTGSG--VLAIAAEKLGGKALGVDIDPMVLPQ 157 Query: 137 AKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSN 171 A++NA NGV RF L+ +++ G FD++V+N Sbjct: 158 AEANAKRNGVRPRF--LEGSLEAALPFGPFDLLVAN 191 >gi|218282386|ref|ZP_03488668.1| hypothetical protein EUBIFOR_01250 [Eubacterium biforme DSM 3989] gi|218216672|gb|EEC90210.1| hypothetical protein EUBIFOR_01250 [Eubacterium biforme DSM 3989] Length = 217 Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust. Identities = 30/94 (31%), Positives = 50/94 (53%), Gaps = 4/94 (4%) Query: 83 DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142 D+ L R++K++ RILD+GT GA+ L + + VGV++ + ++A+ NA Sbjct: 27 DTKLLAQFVRLKKQE--RILDIGTNNGAL-LVYFDQFHIKELVGVEVLEETSKVAQKNAD 83 Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE 176 + + V+ LFDV+VSNPPY + Sbjct: 84 C-FIKHPVKIVNQPIQEYVDDLFDVVVSNPPYFK 116 >gi|188596421|pdb|3CJT|A Chain A, Ribosomal Protein L11 Methyltransferase (Prma) In Complex With Dimethylated Ribosomal Protein L11 gi|188596423|pdb|3CJT|C Chain C, Ribosomal Protein L11 Methyltransferase (Prma) In Complex With Dimethylated Ribosomal Protein L11 gi|188596425|pdb|3CJT|E Chain E, Ribosomal Protein L11 Methyltransferase (Prma) In Complex With Dimethylated Ribosomal Protein L11 gi|188596427|pdb|3CJT|G Chain G, Ribosomal Protein L11 Methyltransferase (Prma) In Complex With Dimethylated Ribosomal Protein L11 gi|188596429|pdb|3CJT|I Chain I, Ribosomal Protein L11 Methyltransferase (Prma) In Complex With Dimethylated Ribosomal Protein L11 gi|188596431|pdb|3CJT|K Chain K, Ribosomal Protein L11 Methyltransferase (Prma) In Complex With Dimethylated Ribosomal Protein L11 gi|188596433|pdb|3CJT|M Chain M, Ribosomal Protein L11 Methyltransferase (Prma) In Complex With Dimethylated Ribosomal Protein L11 gi|188596435|pdb|3CJT|O Chain O, Ribosomal Protein L11 Methyltransferase (Prma) In Complex With Dimethylated Ribosomal Protein L11 Length = 254 Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust. Identities = 38/96 (39%), Positives = 52/96 (54%), Gaps = 10/96 (10%) Query: 77 ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136 ET L ALA L R ++LDLGTG+G LA+ E K +GVDI L Sbjct: 105 ETTRLALKALARHL-----RPGDKVLDLGTGSG--VLAIAAEKLGGKALGVDIDPMVLPQ 157 Query: 137 AKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSN 171 A++NA NGV RF L+ +++ G FD++V+N Sbjct: 158 AEANAKRNGVRPRF--LEGSLEAALPFGPFDLLVAN 191 >gi|302561655|ref|ZP_07313997.1| conserved hypothetical protein [Streptomyces griseoflavus Tu4000] gi|302479273|gb|EFL42366.1| conserved hypothetical protein [Streptomyces griseoflavus Tu4000] Length = 349 Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust. Identities = 24/70 (34%), Positives = 37/70 (52%) Query: 90 LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 L + R R LDLG G G + + P F GVG+D++ +A+ A+ A NGV++R Sbjct: 162 LEAMRGRGATRALDLGCGGGQLLVDACLNDPGFSGVGIDLAPEAVAAAQDLARRNGVADR 221 Query: 150 FDTLQSDWFS 159 +D F+ Sbjct: 222 LSFFVADAFA 231 >gi|289450687|ref|YP_003475049.1| methyltransferase small domain-containing protein [Clostridiales genomosp. BVAB3 str. UPII9-5] gi|289185234|gb|ADC91659.1| methyltransferase small domain protein [Clostridiales genomosp. BVAB3 str. UPII9-5] Length = 212 Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust. Identities = 30/75 (40%), Positives = 41/75 (54%), Gaps = 3/75 (4%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R LDLG G G + + L P K VDI+ +A+ +AK N +G+ SD FS Sbjct: 68 RALDLGCGIGIIAIVLQGYLPQLKFSAVDINERAVSLAKRNVQASGLD--IPVHVSDGFS 125 Query: 160 SV-EGLFDVIVSNPP 173 ++ E F +IVSNPP Sbjct: 126 ALKEEEFSLIVSNPP 140 >gi|167752001|ref|ZP_02424128.1| hypothetical protein ALIPUT_00243 [Alistipes putredinis DSM 17216] gi|167660242|gb|EDS04372.1| hypothetical protein ALIPUT_00243 [Alistipes putredinis DSM 17216] Length = 232 Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust. Identities = 29/78 (37%), Positives = 43/78 (55%), Gaps = 6/78 (7%) Query: 100 RILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSERFD--TLQSD 156 R+LD+GTGTG + L L + S + V +D+ C A N + ++R D ++ Sbjct: 37 RMLDVGTGTGLIALMLAQRSAAWITAVDIDVECATQ--AAENFAASPWADRLDAVSVAVQ 94 Query: 157 WFSSVEGLFDVIVSNPPY 174 + VE FD+IVSNPPY Sbjct: 95 RYDPVEK-FDLIVSNPPY 111 >gi|301299984|ref|ZP_07206209.1| putative type I restriction-modification system, M subunit [Lactobacillus salivarius ACS-116-V-Col5a] gi|300852375|gb|EFK80034.1| putative type I restriction-modification system, M subunit [Lactobacillus salivarius ACS-116-V-Col5a] Length = 463 Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust. Identities = 31/89 (34%), Positives = 51/89 (57%), Gaps = 16/89 (17%) Query: 95 KRDVVRILDLGTGTGAVCL----ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-R 149 K++ V I D GT ++ L A LKE+ ++ G DIS +A++ A NA+ N ++E + Sbjct: 169 KKEGVSIYDPALGTASLLLGINQAALKENRYY---GQDISTQAVKTAIMNAIVNDIAEDK 225 Query: 150 FD-----TLQSDWFSSVEGLFDVIVSNPP 173 F+ TL ++W G D++VS+PP Sbjct: 226 FEFKNENTLANNWEF---GKVDIVVSDPP 251 >gi|262831311|sp|A6LD46|TRMN6_PARD8 RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName: Full=tRNA m6A37 methyltransferase Length = 237 Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust. Identities = 28/78 (35%), Positives = 39/78 (50%), Gaps = 4/78 (5%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ---SD 156 RILD+GTGTG + L L + S +DI A A+ N + + R Q S+ Sbjct: 40 RILDVGTGTGLIALMLAQRSTAILD-AIDIDSDACLQAQENIAKSPFANRIQVYQTSLSE 98 Query: 157 WFSSVEGLFDVIVSNPPY 174 + +D+IVSNPPY Sbjct: 99 YMPDENIKYDLIVSNPPY 116 >gi|257125478|ref|YP_003163592.1| ribosomal protein L11 methyltransferase [Leptotrichia buccalis C-1013-b] gi|257049417|gb|ACV38601.1| ribosomal protein L11 methyltransferase [Leptotrichia buccalis C-1013-b] Length = 310 Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust. Identities = 39/147 (26%), Positives = 71/147 (48%), Gaps = 27/147 (18%) Query: 57 WRDFY-------NVRLTLSSDTFEPRP-ETELLVDSALAFS----------LPRIEK--R 96 W+ ++ N+ + S D +EP E + +D LAF + +EK + Sbjct: 109 WKKYFHTVNITDNIVIKPSWDEYEPESNEIVIEIDPGLAFGTGTHETTSLCVEFLEKYVK 168 Query: 97 DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 ++LD+G G+G + L + K+ K VG+DI K ++ N NG+++ F+ + + Sbjct: 169 GKEKLLDIGCGSGILML-IGKKLGVKKVVGIDIDEKVRDVVLENFSKNGINDDFEVIIGN 227 Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCL 183 V G +D++VSN ++VD L Sbjct: 228 LVDDVNGKYDLVVSN------ILVDVL 248 >gi|256852103|ref|ZP_05557490.1| 16S RNA methylase RsmC [Lactobacillus jensenii 27-2-CHN] gi|260661327|ref|ZP_05862240.1| 16S RNA methylase RsmC [Lactobacillus jensenii 115-3-CHN] gi|297205022|ref|ZP_06922418.1| methyltransferase domain protein [Lactobacillus jensenii JV-V16] gi|256615515|gb|EEU20705.1| 16S RNA methylase RsmC [Lactobacillus jensenii 27-2-CHN] gi|260547782|gb|EEX23759.1| 16S RNA methylase RsmC [Lactobacillus jensenii 115-3-CHN] gi|297149600|gb|EFH29897.1| methyltransferase domain protein [Lactobacillus jensenii JV-V16] Length = 203 Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust. Identities = 24/73 (32%), Positives = 44/73 (60%), Gaps = 1/73 (1%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 ILD+G G G + L K+ P + VD++ +A+++A+ NA NGV+ + S + + Sbjct: 67 ILDVGCGYGPIGLFAAKKWPDRQVDMVDVNERAMDLARKNAEVNGVTN-VNIFASSVYEN 125 Query: 161 VEGLFDVIVSNPP 173 V+ + +I++NPP Sbjct: 126 VDKQYAMILTNPP 138 >gi|29467707|dbj|BAC67244.1| ribosomal protein L11 methyltransferase [Thermus thermophilus] Length = 254 Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust. Identities = 38/96 (39%), Positives = 52/96 (54%), Gaps = 10/96 (10%) Query: 77 ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136 ET L ALA L R ++LDLGTG+G LA+ E K +GVDI L Sbjct: 105 ETTRLALKALARHL-----RPGDKVLDLGTGSG--VLAIAAEKLGGKALGVDIDPMVLPQ 157 Query: 137 AKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSN 171 A++NA NGV RF L+ +++ G FD++V+N Sbjct: 158 AEANAKRNGVRPRF--LEGSLEAALPFGPFDLLVAN 191 >gi|153839372|ref|ZP_01992039.1| methyltransferase [Vibrio parahaemolyticus AQ3810] gi|149747120|gb|EDM58108.1| methyltransferase [Vibrio parahaemolyticus AQ3810] Length = 239 Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust. Identities = 29/86 (33%), Positives = 38/86 (44%), Gaps = 1/86 (1%) Query: 93 IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152 +E ILD+GTGTG + L + P K VDI A+E A N + +R Sbjct: 38 MESPSPAHILDIGTGTGLLALMCAQRFPDAKITAVDIETTAVEAASHNFSHSPWHDRLSV 97 Query: 153 LQSD-WFSSVEGLFDVIVSNPPYIES 177 +D S F IV NPPY + Sbjct: 98 QHTDVLIFSPPQRFQRIVCNPPYFNT 123 >gi|332289730|ref|YP_004420582.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Gallibacterium anatis UMN179] gi|330432626|gb|AEC17685.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Gallibacterium anatis UMN179] Length = 276 Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust. Identities = 31/84 (36%), Positives = 45/84 (53%), Gaps = 6/84 (7%) Query: 100 RILDLGTGTGAVCLALLKESPF-FKGVGVDIS----CKALEIAKSNAVTNGVSERFDTLQ 154 RILDLG GTG + L L + S + VGV+I C+AL+ + + V+ ++Q Sbjct: 74 RILDLGCGTGLIALMLAQRSAADCQIVGVEIEENAYCQALDNVAISPWSARVTIYHQSMQ 133 Query: 155 SDWFSSVEGLFDVIVSNPPYIESV 178 + FD+IV+NPPY ES Sbjct: 134 -QFCRETSQRFDLIVANPPYFESA 156 >gi|226366208|ref|YP_002783991.1| hypothetical protein ROP_67990 [Rhodococcus opacus B4] gi|226244698|dbj|BAH55046.1| hypothetical protein [Rhodococcus opacus B4] Length = 493 Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust. Identities = 28/78 (35%), Positives = 41/78 (52%), Gaps = 5/78 (6%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LD+GTG G AL S D++ +A+++A A N + + L WF Sbjct: 158 LLDIGTGCG--IQALHGASYAHSITATDLNVRAVDLAAVTAALN--EQEVELLAGSWFEP 213 Query: 161 VEG-LFDVIVSNPPYIES 177 VEG FD IV+NPP++ S Sbjct: 214 VEGRTFDQIVANPPFVVS 231 >gi|218296236|ref|ZP_03496992.1| ubiquinone/menaquinone biosynthesis methyltransferase [Thermus aquaticus Y51MC23] gi|218243308|gb|EED09838.1| ubiquinone/menaquinone biosynthesis methyltransferase [Thermus aquaticus Y51MC23] Length = 219 Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust. Identities = 26/69 (37%), Positives = 35/69 (50%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 RILDL TGTG + L L +P + VG D + LEIA+ A G+S F + Sbjct: 39 RILDLATGTGDLALLLKASAPEAEVVGADFAPPMLEIARKKASARGLSVAFQEADALALP 98 Query: 160 SVEGLFDVI 168 +G FD + Sbjct: 99 FPDGSFDAV 107 >gi|294673744|ref|YP_003574360.1| 50S ribosomal protein L11 methyltransferase [Prevotella ruminicola 23] gi|294472251|gb|ADE81640.1| ribosomal protein L11 methyltransferase [Prevotella ruminicola 23] Length = 280 Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust. Identities = 33/111 (29%), Positives = 57/111 (51%), Gaps = 13/111 (11%) Query: 73 EPRPETELLVDSALAFSLPRIEKRDVV----------RILDLGTGTGAVCLALLKESPFF 122 E + ++ +D+ LAF E ++ R+LD GTGTG + + LK Sbjct: 108 EVDSKVQIEIDAKLAFGTGTHETTRMICTQLLKLAKGRVLDCGTGTGILSICALKLGAT- 166 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW--FSSVEGLFDVIVSN 171 + VG DI +++ A+ NAV N V +RF +L D +++ FD++++N Sbjct: 167 EAVGYDIDEWSVDNARHNAVINRVDDRFTSLLGDAKILENIDEKFDIVLAN 217 >gi|182438576|ref|YP_001826295.1| putative methyltransferase [Streptomyces griseus subsp. griseus NBRC 13350] gi|178467092|dbj|BAG21612.1| putative methyltransferase [Streptomyces griseus subsp. griseus NBRC 13350] Length = 294 Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust. Identities = 26/71 (36%), Positives = 39/71 (54%) Query: 97 DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 DV ++DLG+GTG ALL+ P + VD S + LE S A G+ +R TL++D Sbjct: 60 DVRSVVDLGSGTGTGTFALLERFPTARVTAVDSSPEMLERLASAARDRGLGDRVRTLEAD 119 Query: 157 WFSSVEGLFDV 167 + + G+ D Sbjct: 120 AGAGLPGVADA 130 >gi|308048606|ref|YP_003912172.1| rRNA (guanine-N(2)-)-methyltransferase [Ferrimonas balearica DSM 9799] gi|307630796|gb|ADN75098.1| rRNA (guanine-N(2)-)-methyltransferase [Ferrimonas balearica DSM 9799] Length = 366 Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust. Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 1/81 (1%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 I+DLG G G + +ALL+ +P + VD S A+ + N + RF+ + +D S Sbjct: 226 IVDLGCGNGVLSMALLQANPDAHILAVDESWDAVRSTEENLASVADQSRFEVVWNDCLSG 285 Query: 161 VE-GLFDVIVSNPPYIESVIV 180 ++ G D +V NPP+ + V Sbjct: 286 MDGGQADWVVCNPPFHQQQAV 306 >gi|260892856|ref|YP_003238953.1| methyltransferase small [Ammonifex degensii KC4] gi|260864997|gb|ACX52103.1| methyltransferase small [Ammonifex degensii KC4] Length = 392 Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust. Identities = 28/81 (34%), Positives = 45/81 (55%), Gaps = 7/81 (8%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 +R+LD TG +A K + V VD+S +ALE+A+ NAV NGV E+ +++ F Sbjct: 219 MRVLDCFCYTGGFAVAAAK-GEAEEVVAVDVSEQALELARENAVLNGVEEKISWREANCF 277 Query: 159 SSVEGL------FDVIVSNPP 173 + L FD+++ +PP Sbjct: 278 DELRRLEKAGEKFDLVILDPP 298 >gi|28897280|ref|NP_796885.1| hypothetical protein VP0506 [Vibrio parahaemolyticus RIMD 2210633] gi|260876245|ref|ZP_05888600.1| methyltransferase small domain protein [Vibrio parahaemolyticus AN-5034] gi|81839890|sp|Q87SB8|TRMN6_VIBPA RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName: Full=tRNA m6A37 methyltransferase gi|28805489|dbj|BAC58769.1| conserved hypothetical protein [Vibrio parahaemolyticus RIMD 2210633] gi|308092858|gb|EFO42553.1| methyltransferase small domain protein [Vibrio parahaemolyticus AN-5034] Length = 239 Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust. Identities = 29/86 (33%), Positives = 38/86 (44%), Gaps = 1/86 (1%) Query: 93 IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152 +E ILD+GTGTG + L + P K VDI A+E A N + +R Sbjct: 38 MESPSPAHILDIGTGTGLLALMCAQRFPDAKITAVDIETTAVEAASHNFSHSPWHDRLSV 97 Query: 153 LQSD-WFSSVEGLFDVIVSNPPYIES 177 +D S F IV NPPY + Sbjct: 98 QHTDVLIFSPPQRFQRIVCNPPYFNT 123 >gi|313668347|ref|YP_004048631.1| hypothetical protein NLA_10380 [Neisseria lactamica ST-640] gi|313005809|emb|CBN87263.1| conserved hypothetical protein [Neisseria lactamica 020-06] Length = 331 Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust. Identities = 36/128 (28%), Positives = 62/128 (48%), Gaps = 21/128 (16%) Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 LD+GTG+G V A+L + +G D + +A+ A++N G+ ++ + ++D F + Sbjct: 157 LDIGTGSG-VLAAILAKQGIPSVIGTDTNPRAVACARANIARLGLEKQVEIRETDMFPDM 215 Query: 162 EGLFDVIVSNPPY--------IESVIVD----CLGLEVRDFDPRISLDGGIDGLSHYRTI 209 D+IV NPP+ +ES + D L +RD ++ DG I R I Sbjct: 216 RA--DLIVCNPPWLPAKPTSAVESALYDPDSAMLAAFLRDAPKHLNPDGEI------RLI 267 Query: 210 ADGVSRHL 217 ++ HL Sbjct: 268 ISDLAEHL 275 >gi|183599785|ref|ZP_02961278.1| hypothetical protein PROSTU_03293 [Providencia stuartii ATCC 25827] gi|188022049|gb|EDU60089.1| hypothetical protein PROSTU_03293 [Providencia stuartii ATCC 25827] Length = 242 Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust. Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 3/83 (3%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD--W 157 + LD+G+G+G + L L + + V++ A + A+ N + ER + D Sbjct: 44 KALDIGSGSGLIALMLAQRNQQMTVDAVELDKAAAQQAQENFAESKWGERLQIFEQDITQ 103 Query: 158 FS-SVEGLFDVIVSNPPYIESVI 179 FS S + +D+IVSNPPY E + Sbjct: 104 FSVSRQKAYDLIVSNPPYFEPSV 126 >gi|15897648|ref|NP_342253.1| hypothetical protein SSO0748 [Sulfolobus solfataricus P2] gi|284174974|ref|ZP_06388943.1| hypothetical protein Ssol98_10001 [Sulfolobus solfataricus 98/2] gi|6015728|emb|CAB57555.1| hypothetical protein [Sulfolobus solfataricus P2] gi|13813915|gb|AAK41043.1| Conserved hypothetical protein [Sulfolobus solfataricus P2] gi|261602417|gb|ACX92020.1| methylase [Sulfolobus solfataricus 98/2] Length = 207 Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust. Identities = 48/150 (32%), Positives = 71/150 (47%), Gaps = 26/150 (17%) Query: 59 DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118 +F +RL L+ T+EP +T++L+ SL R+ K D ++LD+G+G+G + + L Sbjct: 8 EFRGIRLCLNDQTYEPSDDTDILL------SLLRVGKGD--KVLDMGSGSGILGIWSLMM 59 Query: 119 SPFFKGVGVDISCKA-LEIAKSNAVTN--GVSERFDTLQSDWFSSVEGL-FDVIVSNPPY 174 K V VDI+ A L S V N + L D S + FDV + NPPY Sbjct: 60 GG--KVVFVDINPYATLSTLCSLKVNNLYNTPNYYGVLNCDLLSCLRKYDFDVAIFNPPY 117 Query: 175 IESVIVDCLGLEVRDFDPRI--SLDGGIDG 202 L V +++ I S GG DG Sbjct: 118 ----------LPVEEYNEWIEYSWSGGNDG 137 >gi|323491503|ref|ZP_08096685.1| tRNA (adenine-N(6)-)-methyltransferase [Vibrio brasiliensis LMG 20546] gi|323314257|gb|EGA67339.1| tRNA (adenine-N(6)-)-methyltransferase [Vibrio brasiliensis LMG 20546] Length = 235 Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust. Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 1/78 (1%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS- 159 +LD+GTGTG + L + S +DI A+E A++N + S+R +D Sbjct: 42 LLDIGTGTGLLALMCAQRSHLLNIEAIDIEQNAIEAAQANFDASAWSDRLTLHHADVLKH 101 Query: 160 SVEGLFDVIVSNPPYIES 177 + F+ I+ NPPY S Sbjct: 102 PFKHSFEAIICNPPYFNS 119 >gi|297538014|ref|YP_003673783.1| methyltransferase small [Methylotenera sp. 301] gi|297257361|gb|ADI29206.1| methyltransferase small [Methylotenera sp. 301] Length = 392 Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust. Identities = 35/112 (31%), Positives = 56/112 (50%), Gaps = 4/112 (3%) Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162 D+GTGTG V A+L + D S +AL+ A N G+ ++++ F S E Sbjct: 216 DIGTGTG-VLAAILANRGITNIIATDNSHRALDCALKNVNLLGLKNNVKLVEANLFPSAE 274 Query: 163 -GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL-SHYRTIADG 212 G D+IV NPP++ + L + D ++ L G ++GL +H T +G Sbjct: 275 YGKADLIVCNPPWLPAHPSSALESAIYDEKSKM-LKGFLNGLNAHLNTNGEG 325 >gi|239833219|ref|ZP_04681548.1| methyltransferase small [Ochrobactrum intermedium LMG 3301] gi|239825486|gb|EEQ97054.1| methyltransferase small [Ochrobactrum intermedium LMG 3301] Length = 355 Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust. Identities = 33/120 (27%), Positives = 56/120 (46%), Gaps = 10/120 (8%) Query: 70 DTFEPRPE--TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 D F+ P + ++D A +P +EK + DLG G G + LK + K + + Sbjct: 182 DVFQTEPGMFSHGVIDKGSALLVPHMEKIVFGNVADLGAGWGYLAAQCLKFADRIKAIDL 241 Query: 128 -DISCKALEIAKSNAVTNGVSERFDTLQSDWF----SSVEGLFDVIVSNPPYIESVIVDC 182 ++ +ALE A+ N G S + +WF + G++D +V NPP+ E + D Sbjct: 242 YEVDFEALEAARGNLERLGPSV---PISFNWFDVTSEKLTGIYDTVVMNPPFHEGRVTDV 298 >gi|254226531|ref|ZP_04920114.1| conserved hypothetical protein [Vibrio cholerae V51] gi|125620935|gb|EAZ49286.1| conserved hypothetical protein [Vibrio cholerae V51] Length = 240 Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust. Identities = 26/80 (32%), Positives = 37/80 (46%), Gaps = 5/80 (6%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD---W 157 ILD+G GTG + L + P +DI A + A+ N + +ER + +D W Sbjct: 46 ILDIGCGTGLLSLMCAQRFPHAHITALDIEQSAYQAAEHNRQQSAWAERIECQHADILHW 105 Query: 158 FSSVEGLFDVIVSNPPYIES 177 S F I+ NPPY S Sbjct: 106 LPSKR--FAAIICNPPYFNS 123 >gi|307132127|ref|YP_003884143.1| putative S-adenosyl-L-methionine-dependent methyltransferase [Dickeya dadantii 3937] gi|306529656|gb|ADM99586.1| predicted S-adenosyl-L-methionine-dependent methyltransferase [Dickeya dadantii 3937] Length = 254 Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust. Identities = 40/130 (30%), Positives = 59/130 (45%), Gaps = 13/130 (10%) Query: 96 RDVVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQ 154 R+ RILD+G G+G + L L + S V GV++ A E A NA + ++ Q Sbjct: 52 REESRILDIGCGSGLIALMLAQRSGGRIPVDGVELDVAASEQAAGNAAASPWADSIRIHQ 111 Query: 155 SD---WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIAD 211 D + +V + +IVSNPPY + VDC + +L + T+ D Sbjct: 112 IDILAYARAVASRYSLIVSNPPYF-TPGVDCASAQRAQARYTATLT--------HETLLD 162 Query: 212 GVSRHLNKDG 221 SR L DG Sbjct: 163 CASRLLTPDG 172 >gi|161528888|ref|YP_001582714.1| methylase [Nitrosopumilus maritimus SCM1] gi|160340189|gb|ABX13276.1| putative methylase [Nitrosopumilus maritimus SCM1] Length = 178 Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust. Identities = 52/189 (27%), Positives = 83/189 (43%), Gaps = 39/189 (20%) Query: 69 SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128 +D + P +T + ++ IE + LD+G+G+G + LL E+ F VG D Sbjct: 8 NDEYPPSEDTFFIAEN--------IENENGEYALDIGSGSGYLT-KLLSEN-FSLVVGTD 57 Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVR 188 I+C L+ S N + + +++ FD IV N PY+ + E+ Sbjct: 58 INCDVLQHQSSYKTQNLIC-------CNGSDALKVKFDFIVCNLPYLATD-------EIL 103 Query: 189 DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG--------LCSVE--IGYNQKVDV-VR 237 D I+ DGG +G + I D +L K+G L + E I Y QK+ + R Sbjct: 104 D----IATDGGAEGFEIPKKIFDSAKNNLKKNGKFVFVTSSLSNYEKLIDYAQKLGLKTR 159 Query: 238 IFESRKLFL 246 I +KLF Sbjct: 160 IMAKKKLFF 168 >gi|300869710|ref|YP_003784581.1| modification methylase BsuBI [Brachyspira pilosicoli 95/1000] gi|300687409|gb|ADK30080.1| modification methylase, BsuBI [Brachyspira pilosicoli 95/1000] Length = 406 Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust. Identities = 35/108 (32%), Positives = 53/108 (49%), Gaps = 13/108 (12%) Query: 72 FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV---GVD 128 F P+ +LL+ + S EK+D V+ILD G+G L+ +FK G D Sbjct: 29 FTPKSIRDLLLKELINIS----EKKDNVKILDPACGSGEFLLSC---REYFKNAHMHGFD 81 Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE 176 I + I+K + N + DTL+ D S++ +D I+ NPPY E Sbjct: 82 IDESLVSISKK-LINNADIKCLDTLKFDTDKSIK--YDYIIGNPPYFE 126 >gi|326779224|ref|ZP_08238489.1| Methyltransferase type 12 [Streptomyces cf. griseus XylebKG-1] gi|326659557|gb|EGE44403.1| Methyltransferase type 12 [Streptomyces cf. griseus XylebKG-1] Length = 302 Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust. Identities = 26/71 (36%), Positives = 39/71 (54%) Query: 97 DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 DV ++DLG+GTG ALL+ P + VD S + LE S A G+ +R TL++D Sbjct: 68 DVRSVVDLGSGTGTGTFALLERFPTARVTAVDSSPEMLERLASAARDRGLGDRVRTLEAD 127 Query: 157 WFSSVEGLFDV 167 + + G+ D Sbjct: 128 AGAGLPGVADA 138 >gi|302540724|ref|ZP_07293066.1| putative methylase [Streptomyces hygroscopicus ATCC 53653] gi|302458342|gb|EFL21435.1| putative methylase [Streptomyces himastatinicus ATCC 53653] Length = 218 Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust. Identities = 38/108 (35%), Positives = 54/108 (50%), Gaps = 11/108 (10%) Query: 72 FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV-GVDIS 130 + P+ +T LL ++ R ++LD+GTGTGA LALL GV VD+S Sbjct: 2 YAPQDDTALLAEAVC-----REPAMPGAQVLDIGTGTGA--LALLAARCGAAGVEAVDVS 54 Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIES 177 +A+ A N +G R D S G FDV+++NPPY+ S Sbjct: 55 ARAVLAAWLNTRRSGQPVRVRL--GDLASVASGRRFDVVLANPPYVPS 100 >gi|161502253|ref|YP_001569365.1| hypothetical protein SARI_00281 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160863600|gb|ABX20223.1| hypothetical protein SARI_00281 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 219 Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust. Identities = 30/85 (35%), Positives = 45/85 (52%), Gaps = 6/85 (7%) Query: 97 DVVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQS 155 DV RILD+GTG+G + L L + + V V++ +A A+ N + + R T+ + Sbjct: 18 DVKRILDIGTGSGLLALMLAQRTDDNVPVDAVELDAEAAMQAQENVAHSPWAHRI-TVHT 76 Query: 156 D----WFSSVEGLFDVIVSNPPYIE 176 D W FD+I+SNPPY E Sbjct: 77 DDIQRWAPRQTVRFDLIISNPPYYE 101 >gi|85858414|ref|YP_460616.1| ribosomal protein L11 methyltransferase [Syntrophus aciditrophicus SB] gi|85721505|gb|ABC76448.1| ribosomal protein L11 methyltransferase [Syntrophus aciditrophicus SB] Length = 319 Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust. Identities = 28/75 (37%), Positives = 45/75 (60%), Gaps = 2/75 (2%) Query: 97 DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 + + +LD+GTGTG + +A K + + VDI KA EIAK N N V +R Q + Sbjct: 179 EPLNVLDVGTGTGILGIASAKLG-AERVLCVDIDPKATEIAKENIAINHVEDRVSVRQEE 237 Query: 157 WFSSVEGLFDVIVSN 171 S+++G +++IV+N Sbjct: 238 -ISTLKGTYNLIVAN 251 >gi|260439407|ref|ZP_05793223.1| putative N-6 adenine-specific DNA methylase [Butyrivibrio crossotus DSM 2876] gi|292808203|gb|EFF67408.1| putative N-6 adenine-specific DNA methylase [Butyrivibrio crossotus DSM 2876] Length = 245 Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust. Identities = 28/98 (28%), Positives = 51/98 (52%), Gaps = 6/98 (6%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 +D+ L S ++ + D ++LDL TG G + + L + + G++I +++AK + Sbjct: 32 IDAVLLCSFTKVNEGD--KVLDLCTGNGVIPILLKGRTKGSRFSGLEIQDINVDMAKRSV 89 Query: 142 VTNGVSERFDTLQSDWFSSV----EGLFDVIVSNPPYI 175 NG+ E D ++ D + E FDV+ NPPY+ Sbjct: 90 EYNGIGEFVDIVKGDVKEASGIFGEASFDVVTCNPPYM 127 >gi|262831280|sp|A9MGW2|TRMN6_SALAR RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName: Full=tRNA m6A37 methyltransferase Length = 245 Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust. Identities = 30/85 (35%), Positives = 45/85 (52%), Gaps = 6/85 (7%) Query: 97 DVVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQS 155 DV RILD+GTG+G + L L + + V V++ +A A+ N + + R T+ + Sbjct: 44 DVKRILDIGTGSGLLALMLAQRTDDNVPVDAVELDAEAAMQAQENVAHSPWAHRI-TVHT 102 Query: 156 D----WFSSVEGLFDVIVSNPPYIE 176 D W FD+I+SNPPY E Sbjct: 103 DDIQRWAPRQTVRFDLIISNPPYYE 127 >gi|323465895|gb|ADX69582.1| Methyltransferase domain protein [Lactobacillus helveticus H10] Length = 209 Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust. Identities = 26/74 (35%), Positives = 42/74 (56%), Gaps = 1/74 (1%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ILD+GTG G + L K P VD++ + L++AK NA N +S + SD ++ Sbjct: 66 NILDVGTGYGPIGLFAAKFWPDQTVDMVDVNERGLKLAKQNAQVNHIS-NVNIYSSDCYA 124 Query: 160 SVEGLFDVIVSNPP 173 V+ + +I++NPP Sbjct: 125 QVDKKYGLILTNPP 138 >gi|323345620|ref|ZP_08085843.1| metallothionein SmtA [Prevotella oralis ATCC 33269] gi|323093734|gb|EFZ36312.1| metallothionein SmtA [Prevotella oralis ATCC 33269] Length = 234 Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust. Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 5/79 (6%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS--- 155 +RILD+GTGTG + L + + + VGV+I A A+ N + R + + + Sbjct: 37 MRILDVGTGTGLIALMMAQRFAESRVVGVEIDVDACLQAQQNVTESPFVSRVEIINARLQ 96 Query: 156 DWFSSVEGLFDVIVSNPPY 174 D+ ++ FD IVSNPP+ Sbjct: 97 DYLPDIK--FDSIVSNPPF 113 >gi|329120300|ref|ZP_08248968.1| methyltransferase domain protein [Neisseria bacilliformis ATCC BAA-1200] gi|327462641|gb|EGF08964.1| methyltransferase domain protein [Neisseria bacilliformis ATCC BAA-1200] Length = 378 Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust. Identities = 33/120 (27%), Positives = 56/120 (46%), Gaps = 14/120 (11%) Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 D+GTG+G + ALL + D + +AL A++N G ++ ++D F Sbjct: 201 FDIGTGSG-ILAALLAQRGITCITATDNNPRALACARANIRRLGFADNISVEEADLFP-- 257 Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221 EG D+I+ NPP++ + +E +DP G + R +G + HLN +G Sbjct: 258 EGRADLILCNPPWLPAKPTSA--IETALYDP---------GHAMLRGFLNGAAAHLNPNG 306 >gi|325068357|ref|ZP_08127030.1| DNA methyl transferase [Actinomyces oris K20] Length = 541 Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust. Identities = 31/110 (28%), Positives = 52/110 (47%), Gaps = 12/110 (10%) Query: 70 DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129 TF P P +V S L ++ R+ R++D G G+G LA L+ P G+ D+ Sbjct: 73 QTFTPAP----IVRSMLEWTKGRVTP---ARVVDPGCGSGRYILAALRAFPHAVGLASDL 125 Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDW----FSSVEGLFDVIVSNPPYI 175 A + ++NA G+ R + D+ +EG+ + + NPPY+ Sbjct: 126 DPYATLMTRANARVLGLESRLKVIVGDYRALRLPKIEGV-TLFLGNPPYV 174 >gi|311744775|ref|ZP_07718571.1| 16S rRNA methyltransferase [Aeromicrobium marinum DSM 15272] gi|311311892|gb|EFQ81813.1| 16S rRNA methyltransferase [Aeromicrobium marinum DSM 15272] Length = 199 Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust. Identities = 39/138 (28%), Positives = 63/138 (45%), Gaps = 5/138 (3%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+LDLG G G + LA + P + VD++ +A E+ NA +G++ R + Sbjct: 61 RLLDLGCGWGPLALAAARTHPSAEVWAVDVNDRARELTALNAERHGLAVRVASPDG---V 117 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 E FD I SNPP V L + + PR++ DG + + AD + R L Sbjct: 118 PPEVQFDAIWSNPPI--RVGKQALHELLLRWLPRLTPDGELMMVVGRNLGADSLHRWLVD 175 Query: 220 DGLCSVEIGYNQKVDVVR 237 G + + ++ V+R Sbjct: 176 QGWPTERVASSRGFRVLR 193 >gi|170595492|ref|XP_001902404.1| methylase family protein [Brugia malayi] gi|158589947|gb|EDP28750.1| methylase, putative family protein [Brugia malayi] Length = 199 Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust. Identities = 36/122 (29%), Positives = 65/122 (53%), Gaps = 12/122 (9%) Query: 60 FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAV---CLALL 116 Y++ +EP +T LL+D AL +E+ + ++++G+G+G + C LL Sbjct: 6 LYHITDEQKDSVYEPAEDTFLLLD-ALEKDREALEQLEPNVVVEIGSGSGIISVFCQQLL 64 Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNP 172 + P V D++ KAL+ ++ A N V+ + +Q D S+++ GL DV++ NP Sbjct: 65 R-VPVLTLV-TDMNFKALQCTRATAQLNNVA--VEAVQCDLLSALDHRLYGLVDVLLFNP 120 Query: 173 PY 174 PY Sbjct: 121 PY 122 >gi|15643837|ref|NP_228885.1| ribosomal protein L11 methyltransferase, putative [Thermotoga maritima MSB8] gi|38605526|sp|Q9X0G8|PRMA_THEMA RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11 Mtase gi|4981624|gb|AAD36156.1|AE001768_5 ribosomal protein L11 methyltransferase, putative [Thermotoga maritima MSB8] Length = 264 Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust. Identities = 30/73 (41%), Positives = 43/73 (58%), Gaps = 7/73 (9%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL--QSDWF 158 +LD+G GTG + +A K+ + V VD+ +A+E+A+ N N V D L SD Sbjct: 133 VLDVGCGTGILAIAA-KKLGASRVVAVDVDEQAVEVAEENVRKNDV----DVLVKWSDLL 187 Query: 159 SSVEGLFDVIVSN 171 S VEG FD++VSN Sbjct: 188 SEVEGTFDIVVSN 200 >gi|330831275|ref|YP_004394227.1| ribosomal RNA small subunit methyltransferase C [Aeromonas veronii B565] gi|328806411|gb|AEB51610.1| Ribosomal RNA small subunit methyltransferase C [Aeromonas veronii B565] Length = 342 Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust. Identities = 27/75 (36%), Positives = 38/75 (50%), Gaps = 2/75 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 +LD G G G + L K +P + VDIS ALE ++ NG+ + SD +S Sbjct: 205 ELLDFGCGAGVIGSVLAKRNPELQVNMVDISALALESSRRTLAINGLQGKVTA--SDVYS 262 Query: 160 SVEGLFDVIVSNPPY 174 + F IVSNPP+ Sbjct: 263 DLSTRFQHIVSNPPF 277 >gi|161506946|ref|YP_001576900.1| hypothetical protein lhv_0398 [Lactobacillus helveticus DPC 4571] gi|160347935|gb|ABX26609.1| hypothetical protein lhv_0398 [Lactobacillus helveticus DPC 4571] Length = 209 Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust. Identities = 26/73 (35%), Positives = 42/73 (57%), Gaps = 1/73 (1%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 ILD+GTG G + L K P VD++ + L++AK NA N +S + SD ++ Sbjct: 67 ILDVGTGYGPIGLFAAKFWPDQTVDMVDVNERGLKLAKQNAQVNHIS-NVNIYSSDCYAQ 125 Query: 161 VEGLFDVIVSNPP 173 V+ + +I++NPP Sbjct: 126 VDKKYGLILTNPP 138 >gi|160882029|ref|YP_001560997.1| methyltransferase type 11 [Clostridium phytofermentans ISDg] gi|160430695|gb|ABX44258.1| Methyltransferase type 11 [Clostridium phytofermentans ISDg] Length = 256 Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust. Identities = 25/100 (25%), Positives = 54/100 (54%), Gaps = 6/100 (6%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 +D+ L +I+ + LD+GTGTG + + L ++ G++I ++ ++A+ + Sbjct: 43 MDAVLLSGFAKIKPEEST--LDMGTGTGIIPILLAGKTKGKHFTGLEIQEESADMARRSV 100 Query: 142 VTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIES 177 + N + +R + ++ D + + G FDV+ NPPY+ + Sbjct: 101 LYNDLQDRIEIVKGDIKETSKIFGGGSFDVVTCNPPYMNN 140 >gi|324998204|ref|ZP_08119316.1| rRNA/tRNA methylase [Pseudonocardia sp. P1] Length = 522 Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust. Identities = 29/84 (34%), Positives = 44/84 (52%), Gaps = 5/84 (5%) Query: 95 KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154 +R V +LDLGTG G L + + + D+ +AL +A+ + +GV D + Sbjct: 158 RRPVGSLLDLGTGCGVQALHGSRHA--LRVTATDVLPRALALARLSCGLSGVD--VDLRE 213 Query: 155 SDWFSSVEG-LFDVIVSNPPYIES 177 WFS V G FD +VSNPP++ Sbjct: 214 GPWFSPVAGERFDQVVSNPPFVPG 237 >gi|150008489|ref|YP_001303232.1| hypothetical protein BDI_1875 [Parabacteroides distasonis ATCC 8503] gi|149936913|gb|ABR43610.1| conserved hypothetical protein [Parabacteroides distasonis ATCC 8503] Length = 319 Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust. Identities = 28/78 (35%), Positives = 39/78 (50%), Gaps = 4/78 (5%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ---SD 156 RILD+GTGTG + L L + S +DI A A+ N + + R Q S+ Sbjct: 122 RILDVGTGTGLIALMLAQRSTAILD-AIDIDSDACLQAQENIAKSPFANRIQVYQTSLSE 180 Query: 157 WFSSVEGLFDVIVSNPPY 174 + +D+IVSNPPY Sbjct: 181 YMPDENIKYDLIVSNPPY 198 >gi|50291423|ref|XP_448144.1| hypothetical protein [Candida glabrata CBS 138] gi|49527455|emb|CAG61095.1| unnamed protein product [Candida glabrata] Length = 340 Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust. Identities = 61/273 (22%), Positives = 107/273 (39%), Gaps = 33/273 (12%) Query: 14 VTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFE 73 V G + IV ++V + L + + +LG + F L Sbjct: 52 VQGNAVQGNIVQGNAVPGNTAARRLLRGCAARFRGVPLQYVLGSQPFGAAELVCRPGVLI 111 Query: 74 PRPETELLVDSALAFSLPRIEKRDVV------RILDLGTGTGAVCLAL---LKESP-FFK 123 PR ETE LA ++ R + + ++DL TGTG V + + L +P K Sbjct: 112 PRWETEEWALK-LARAIARYSSQQPLAQPLKLTLVDLCTGTGCVPIGIHDELARAPSLIK 170 Query: 124 GVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSDWFSSV--------------EGLFDVI 168 VD+S +A+++ + N + ++ D L+ D + + D++ Sbjct: 171 YTAVDVSPQAIDLCRLNVGRRAIEVKQVDVLRQDSPADIVGGLGPGRGLGLGRGPAIDIL 230 Query: 169 VSNPPYI-ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227 + NPPYI VR ++PR++L I Y+ + D S+H N EI Sbjct: 231 LCNPPYIPRKAFTRTTARSVRLYEPRLAL---IADKEFYKNLVDVWSQHTNS---FVYEI 284 Query: 228 GYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 G + + + V+ ++ V D G R + Sbjct: 285 GDSSQYEYVKQALDPSVWSVGLHIDSNGCPRAV 317 >gi|313206496|ref|YP_004045673.1| methyltransferase type 12 [Riemerella anatipestifer DSM 15868] gi|312445812|gb|ADQ82167.1| Methyltransferase type 12 [Riemerella anatipestifer DSM 15868] gi|315023563|gb|EFT36567.1| Methyltransferase [Riemerella anatipestifer RA-YM] gi|325336058|gb|ADZ12332.1| Predicted O-methyltransferase [Riemerella anatipestifer RA-GD] Length = 235 Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust. Identities = 24/81 (29%), Positives = 41/81 (50%), Gaps = 1/81 (1%) Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS-S 160 L++G GTG + L + + +P + +DI A +A+ N + ER ++ ++ Sbjct: 44 LEVGCGTGIISLMIAQRNPNCSIIAIDIDENASNLAQENFDNSVYQERLKSININFMEYQ 103 Query: 161 VEGLFDVIVSNPPYIESVIVD 181 FD+I SNPPY E+ D Sbjct: 104 PNQKFDLIFSNPPYFETNTSD 124 >gi|303241042|ref|ZP_07327552.1| putative RNA methylase [Acetivibrio cellulolyticus CD2] gi|302591467|gb|EFL61205.1| putative RNA methylase [Acetivibrio cellulolyticus CD2] Length = 251 Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust. Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 4/79 (5%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 ++DLGTGTG + + L ++ VG++I E+A + N + +R + D S Sbjct: 49 VIDLGTGTGIISILLAGKTEAKSIVGLEIQEDIAEMADRSVKMNCLEDRVKIVCGDIKES 108 Query: 161 V----EGLFDVIVSNPPYI 175 V FDV+VSNPPY+ Sbjct: 109 VGRFGASSFDVVVSNPPYM 127 >gi|288926735|ref|ZP_06420646.1| SAM-dependent methyltransferase [Prevotella buccae D17] gi|288336465|gb|EFC74840.1| SAM-dependent methyltransferase [Prevotella buccae D17] Length = 228 Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust. Identities = 27/79 (34%), Positives = 37/79 (46%), Gaps = 5/79 (6%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 ILD+GTGTG + L + + P G+DI A A+ NA + + R + S Sbjct: 51 ILDIGTGTGLIALMMAQRFPEAHVTGIDIDGDAALQARENAADSPFAPRIEVAHSSLAGF 110 Query: 161 VEGL-----FDVIVSNPPY 174 V FD IV NPP+ Sbjct: 111 VAAASPPLSFDSIVCNPPF 129 >gi|224541620|ref|ZP_03682159.1| hypothetical protein CATMIT_00791 [Catenibacterium mitsuokai DSM 15897] gi|224525458|gb|EEF94563.1| hypothetical protein CATMIT_00791 [Catenibacterium mitsuokai DSM 15897] Length = 243 Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust. Identities = 43/159 (27%), Positives = 76/159 (47%), Gaps = 17/159 (10%) Query: 48 HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTG 107 +E I+ +LG+ D +++ D F +D+ L + I K D+ I+D GT Sbjct: 2 NEEINHLLGYND---MKIIQRRDMFT------FSLDTVLLANFCAITK-DMKTIVDFGTN 51 Query: 108 TGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLF 165 A+ L +L + K +GV+I +A+EIA+ N N V ++ + + D V+ Sbjct: 52 NAAIPL-ILTQRTHKKIIGVEIQKEAVEIAERNVKLNHVEDQVEIIHDDIKEYVKYAPRT 110 Query: 166 DVIVSNPPYI----ESVIVDCLGLEVRDFDPRISLDGGI 200 IV NPP+ +S I + + + + +I L+G I Sbjct: 111 KAIVCNPPFFKLGEKSHINESPYMTIARHEIKIDLEGII 149 >gi|213964724|ref|ZP_03392924.1| rRNA or tRNA methylase [Corynebacterium amycolatum SK46] gi|213952917|gb|EEB64299.1| rRNA or tRNA methylase [Corynebacterium amycolatum SK46] Length = 521 Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust. Identities = 31/80 (38%), Positives = 41/80 (51%), Gaps = 7/80 (8%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKG-VGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 V +LDLG G G LA P K V DI +AL A++ NG ++ L+ Sbjct: 169 VESVLDLGAGCGIQSLA----QPDAKSIVATDIHPRALFFARATFAANGF-DQAQALEGS 223 Query: 157 WFSSVEGL-FDVIVSNPPYI 175 WF V G FD IV+NPP++ Sbjct: 224 WFEPVAGQKFDRIVANPPFV 243 >gi|197285751|ref|YP_002151623.1| hypothetical protein PMI1896 [Proteus mirabilis HI4320] gi|262828580|sp|B4F055|TRMN6_PROMH RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName: Full=tRNA m6A37 methyltransferase gi|194683238|emb|CAR43937.1| conserved hypothetical protein [Proteus mirabilis HI4320] Length = 252 Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust. Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 4/84 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 +LD+GTG+G + L L + +P + + G+++ A A NA + S D + Sbjct: 51 VLDIGTGSGLIALMLAQRAPQVERIDGIELDEDAALQASENAQQSQWSSLIHIYHHDIYQ 110 Query: 160 SVEGL---FDVIVSNPPYIESVIV 180 + +D+IVSNPPY E + Sbjct: 111 YAQQAPTRYDLIVSNPPYFEPAVA 134 >gi|125623890|ref|YP_001032373.1| ribosomal RNA small subunit methyltransferase C [Lactococcus lactis subsp. cremoris MG1363] gi|124492698|emb|CAL97652.1| Ribosomal RNA small subunit methyltransferase C [Lactococcus lactis subsp. cremoris MG1363] Length = 198 Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust. Identities = 26/73 (35%), Positives = 43/73 (58%), Gaps = 2/73 (2%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LD+G G G + L L K+ + VD++ +AL++ + NA+ N VS L S+ + + Sbjct: 63 LLDVGCGYGTLGLTLAKKFDLSVTM-VDVNSRALDLCRQNAIDNAVSNTEIEL-SNIYEA 120 Query: 161 VEGLFDVIVSNPP 173 V +D I+SNPP Sbjct: 121 VSEKYDAIISNPP 133 >gi|310644213|ref|YP_003948972.1| methyltransferase small [Paenibacillus polymyxa SC2] gi|309249164|gb|ADO58731.1| Methyltransferase small [Paenibacillus polymyxa SC2] Length = 204 Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust. Identities = 28/74 (37%), Positives = 42/74 (56%), Gaps = 2/74 (2%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LD+G G G + L P VDI+ +A+++A NA NG+ + QSD F+ Sbjct: 61 VLDVGCGYGPIGLTAATLVPDGHVTMVDINERAVQLAIENAERNGI-KNVTIKQSDLFAE 119 Query: 161 VEG-LFDVIVSNPP 173 V+ FDVI++NPP Sbjct: 120 VQHERFDVILTNPP 133 >gi|317046810|ref|YP_004114458.1| rRNA (guanine-N(2)-)-methyltransferase [Pantoea sp. At-9b] gi|316948427|gb|ADU67902.1| rRNA (guanine-N(2)-)-methyltransferase [Pantoea sp. At-9b] Length = 343 Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust. Identities = 28/93 (30%), Positives = 48/93 (51%), Gaps = 2/93 (2%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 +D+ A L + ++LD+G G+G + L + SP + D+ A+ +K+ Sbjct: 181 LDAGSALLLSTLTPHTKGKVLDIGCGSGVLATVLAQHSPKVRLWLCDVHAAAVAASKATL 240 Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174 NG+ + S+ FS V G FD+I+SNPP+ Sbjct: 241 AANGLEG--EVFASNVFSDVTGRFDLIISNPPF 271 >gi|330447421|ref|ZP_08311070.1| S-adenosyl-L-methionine-dependent methyltransferase [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328491612|dbj|GAA05567.1| S-adenosyl-L-methionine-dependent methyltransferase [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 236 Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust. Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 4/79 (5%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD--- 156 R+LD+GTG+G + L + +P ++I +A A+ N + ER ++ D Sbjct: 39 RLLDIGTGSGLLALIAAQRAPMLSIEAIEIDPQAANAARQNFAASPWHERLHCIEQDITL 98 Query: 157 WF-SSVEGLFDVIVSNPPY 174 W S D I+ NPPY Sbjct: 99 WLQSQPSNSVDGIICNPPY 117 >gi|224542341|ref|ZP_03682880.1| hypothetical protein CATMIT_01520 [Catenibacterium mitsuokai DSM 15897] gi|224524723|gb|EEF93828.1| hypothetical protein CATMIT_01520 [Catenibacterium mitsuokai DSM 15897] Length = 197 Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust. Identities = 25/76 (32%), Positives = 43/76 (56%), Gaps = 1/76 (1%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 V +LD+G G GA+ ++L P VD++ +A+++AK + + E +S+ Sbjct: 58 VKSVLDVGCGYGALSISLKMVYPDVTFDMVDVNRRAMDLAK-RTIEDYHLEDMHVYESNA 116 Query: 158 FSSVEGLFDVIVSNPP 173 + VE FD+I+SNPP Sbjct: 117 YDQVEKTFDMIISNPP 132 >gi|282934788|ref|ZP_06340026.1| 16S RNA G1207 methylase RsmC [Lactobacillus jensenii 208-1] gi|281301151|gb|EFA93457.1| 16S RNA G1207 methylase RsmC [Lactobacillus jensenii 208-1] Length = 199 Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust. Identities = 24/73 (32%), Positives = 44/73 (60%), Gaps = 1/73 (1%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 ILD+G G G + L K+ P + VD++ +A+++A+ NA NGV+ + S + + Sbjct: 63 ILDVGCGYGPIGLFAAKKWPDRQVDMVDVNERAMDLARKNAEVNGVT-NVNIFASSVYEN 121 Query: 161 VEGLFDVIVSNPP 173 V+ + +I++NPP Sbjct: 122 VDKQYAMILTNPP 134 >gi|328885830|emb|CCA59069.1| HEN1 C-terminal domain; double-stranded RNA 3-methylase [Streptomyces venezuelae ATCC 10712] Length = 495 Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust. Identities = 35/83 (42%), Positives = 47/83 (56%), Gaps = 5/83 (6%) Query: 68 SSDTFE-PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126 S+DT E P P E D+ LA +L R E R+LDLG G G + ALLK+ F + VG Sbjct: 272 STDTEERPVPLAEQRRDAILA-ALARAE---ASRVLDLGCGQGQLVQALLKDVRFTEIVG 327 Query: 127 VDISCKALEIAKSNAVTNGVSER 149 VD+S +AL +A + + ER Sbjct: 328 VDVSVRALTVAARRLRLDRLGER 350 >gi|238063487|ref|ZP_04608196.1| methyltransferase [Micromonospora sp. ATCC 39149] gi|237885298|gb|EEP74126.1| methyltransferase [Micromonospora sp. ATCC 39149] Length = 497 Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust. Identities = 29/82 (35%), Positives = 45/82 (54%), Gaps = 5/82 (6%) Query: 95 KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154 ++ V LDLGTG+G L L + + D+S +AL A + A NG + ++ L Sbjct: 156 RQPVESALDLGTGSGVQALHLSTHA--RRVTATDVSQRALRFAATTAALNG--QDWELLC 211 Query: 155 SDWFSSVEGL-FDVIVSNPPYI 175 D + V G FD++VSNPP++ Sbjct: 212 GDMVAPVAGRRFDLVVSNPPFV 233 >gi|295702341|ref|YP_003595416.1| 16S rRNA m(2)G 1207 methyltransferase [Bacillus megaterium DSM 319] gi|294800000|gb|ADF37066.1| 16S rRNA m(2)G 1207 methyltransferase [Bacillus megaterium DSM 319] Length = 200 Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust. Identities = 30/74 (40%), Positives = 41/74 (55%), Gaps = 2/74 (2%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LD+G G G + LAL KE VD++ +AL +A+ NA N VS QS + + Sbjct: 62 LLDVGCGYGPIGLALAKEDSQRNVHMVDVNERALALAQKNAEVNSVS-NVSIYQSSCYEN 120 Query: 161 V-EGLFDVIVSNPP 173 V E F I+SNPP Sbjct: 121 VKETNFAAILSNPP 134 >gi|294496974|ref|YP_003560674.1| 16S rRNA m(2)G 1207 methyltransferase [Bacillus megaterium QM B1551] gi|294346911|gb|ADE67240.1| 16S rRNA m(2)G 1207 methyltransferase [Bacillus megaterium QM B1551] Length = 200 Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust. Identities = 30/74 (40%), Positives = 41/74 (55%), Gaps = 2/74 (2%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LD+G G G + LAL KE VD++ +AL +A+ NA N VS QS + + Sbjct: 62 LLDVGCGYGPIGLALAKEDSQRNVHMVDVNERALALAQKNAEVNSVS-NVSIYQSSCYEN 120 Query: 161 V-EGLFDVIVSNPP 173 V E F I+SNPP Sbjct: 121 VKETNFAAILSNPP 134 >gi|255560978|ref|XP_002521501.1| dimethyladenosine transferase, putative [Ricinus communis] gi|223539179|gb|EEF40772.1| dimethyladenosine transferase, putative [Ricinus communis] Length = 366 Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust. Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 3/91 (3%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +L++G GTG + L LL+ + K V V+I + +EI + A G+ ++ D + D + Sbjct: 83 VLEIGPGTGNLTLRLLEVAR--KVVAVEIDKRMVEILRERASEQGLQDKLDIIHKDALKA 140 Query: 161 VEGLFDVIVSNPPY-IESVIVDCLGLEVRDF 190 F+++V+N PY I S +V L V F Sbjct: 141 EFPNFNIVVANIPYGISSPLVTKLVYGVNKF 171 >gi|4104516|gb|AAD02056.1| unknown [Clostridium acetobutylicum DSM 1731] Length = 244 Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust. Identities = 46/192 (23%), Positives = 84/192 (43%), Gaps = 30/192 (15%) Query: 57 WRDFYN-----VRLTLSS--DTFEPRP-ETELLVDSALAF-------------SLPRIEK 95 W+ +Y R+ + + + P+ E L +D +AF +L R Sbjct: 49 WKKYYKPTKIGARIVVKPLWEEYTPKDYELMLNMDPGMAFGTGTHETTRMCIQALERYVN 108 Query: 96 RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155 D + D+GTG+G + +A K + K +GVD+ A++ AK N N V+ + L Sbjct: 109 EDA-EVFDIGTGSGILAIAAAKLNA-KKVLGVDLDSVAVKAAKENIQYNNVN-NIEILHG 165 Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215 + V+G D+IV+N +I D + + + D + + DG + A+ V Sbjct: 166 NLMEVVQGKADIIVAN------IIADVINILIPDINKFLKTDGYFISSGIIKDRAEDVIE 219 Query: 216 HLNKDGLCSVEI 227 +L K+ +E+ Sbjct: 220 NLKKNKFEIIEV 231 >gi|189347631|ref|YP_001944160.1| Mg-protoporphyrin IX methyl transferase [Chlorobium limicola DSM 245] gi|189341778|gb|ACD91181.1| magnesium protoporphyrin O-methyltransferase [Chlorobium limicola DSM 245] Length = 232 Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust. Identities = 30/95 (31%), Positives = 50/95 (52%), Gaps = 4/95 (4%) Query: 75 RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134 R +++D A ++ L ++ ILD G GTG + L KE +K VDI+ + + Sbjct: 44 RQGHAVMMDKAFSW-LQQLNLPKGATILDAGCGTGLFSIRLAKEG--YKVKAVDIASQMV 100 Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIV 169 E AK++A GV+ D + + SV+G +D +V Sbjct: 101 EKAKADATMQGVNNNID-FEVNTIESVKGTYDAVV 134 >gi|302888461|ref|XP_003043117.1| hypothetical protein NECHADRAFT_101990 [Nectria haematococca mpVI 77-13-4] gi|256724032|gb|EEU37404.1| hypothetical protein NECHADRAFT_101990 [Nectria haematococca mpVI 77-13-4] Length = 332 Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust. Identities = 31/91 (34%), Positives = 42/91 (46%), Gaps = 7/91 (7%) Query: 80 LLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKS 139 L D+ L P + +V R+LDLGTGTG + E P + VGVD+S ++ Sbjct: 78 LTFDNKLGLCPPNLPDSNVKRVLDLGTGTGIWAIDFGDEHPEAEVVGVDLSP-----SQP 132 Query: 140 NAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170 N V V D + DW + FD I S Sbjct: 133 NMVPPNVQFLIDDIDEDW--TYTKPFDYIHS 161 >gi|50119218|ref|YP_048385.1| ribosomal protein L11 methyltransferase [Pectobacterium atrosepticum SCRI1043] gi|60390386|sp|Q6DAJ5|PRMA_ERWCT RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11 Mtase gi|49609744|emb|CAG73178.1| ribosomal protein L11 methyltransferase [Pectobacterium atrosepticum SCRI1043] Length = 295 Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust. Identities = 41/120 (34%), Positives = 61/120 (50%), Gaps = 18/120 (15%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159 I+D G G+G + +A LK + +G+DI +A++ ++ NA NGVSER + L D + Sbjct: 162 IIDFGCGSGILAIAALKLG-AARAIGIDIDPQAIQASRDNAQRNGVSERLELYLPKDQPA 220 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS---LDGGIDGLSH-YRTIADGVSR 215 + DV+V+N L +R+ P IS GG GLS T ADGV+ Sbjct: 221 DLSA--DVVVAN----------ILAGPLRELAPLISDLPKAGGHLGLSGVLSTQADGVAE 268 >gi|307595644|ref|YP_003901961.1| methyltransferase [Vulcanisaeta distributa DSM 14429] gi|307550845|gb|ADN50910.1| methyltransferase small [Vulcanisaeta distributa DSM 14429] Length = 198 Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust. Identities = 28/74 (37%), Positives = 44/74 (59%), Gaps = 2/74 (2%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 ILD+G G G + + K +P + V VDI+ A+++A N N VS + SD +++ Sbjct: 60 ILDMGCGYGVLGIVAAKLAPRGRVVMVDINKLAVKLAAINIKINRVSNA-EVRLSDLYNA 118 Query: 161 VEG-LFDVIVSNPP 173 V+G F+ I+SNPP Sbjct: 119 VQGEKFNTIISNPP 132 >gi|291442928|ref|ZP_06582318.1| methyltransferase [Streptomyces roseosporus NRRL 15998] gi|291345875|gb|EFE72779.1| methyltransferase [Streptomyces roseosporus NRRL 15998] Length = 213 Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust. Identities = 47/149 (31%), Positives = 66/149 (44%), Gaps = 13/149 (8%) Query: 75 RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134 RP+T+ L+ LA ++ R +LDL TG+GA LAL + VDIS +A+ Sbjct: 8 RPQTDTLL---LALAMRREGIGPGTDLLDLCTGSGA--LALHAARLGARVTAVDISRRAV 62 Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPR 193 A+ N + + D ++ G FD +VSNPPY+ + GL + P Sbjct: 63 ASARLNTALARLP--VTVRRGDLLRALPGRTFDAVVSNPPYVPAP-----GLALPRHGPG 115 Query: 194 ISLDGGIDGLSHYRTIADGVSRHLNKDGL 222 S D G DG I D L GL Sbjct: 116 RSWDAGPDGRVILDRICDDAFAALRPGGL 144 >gi|254168616|ref|ZP_04875459.1| methylase, putative [Aciduliprofundum boonei T469] gi|197622450|gb|EDY35022.1| methylase, putative [Aciduliprofundum boonei T469] Length = 165 Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust. Identities = 24/76 (31%), Positives = 43/76 (56%), Gaps = 4/76 (5%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++L++GTG GA+ + K + VDI +A++ + A + + +T SD F Sbjct: 10 KVLEVGTGNGAIAIECAKSGSSV--LAVDIDKEAVKRLREEAKIKNL--KIETKVSDLFE 65 Query: 160 SVEGLFDVIVSNPPYI 175 +V+G +D I+ NPPY+ Sbjct: 66 NVDGKYDTIIFNPPYL 81 >gi|116787734|gb|ABK24622.1| unknown [Picea sitchensis] gi|224286210|gb|ACN40814.1| unknown [Picea sitchensis] Length = 277 Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust. Identities = 38/128 (29%), Positives = 65/128 (50%), Gaps = 11/128 (8%) Query: 58 RDFYNVRLT-LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL- 115 R ++RL S+ +EP ++ LVD+ LA + +E+ L+LG G+G V +L Sbjct: 37 RKSADIRLVGCHSEVYEPCDDSFALVDALLADRV-HLEEVQPSLCLELGCGSGYVITSLA 95 Query: 116 --LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIV 169 L E + + DI+ A+E+ K +GV + + +D S ++ G DV+V Sbjct: 96 LMLGEGTGIQYLATDINSAAIEVTKKTLEAHGV--HAEVILTDLVSGLDKRLAGTVDVLV 153 Query: 170 SNPPYIES 177 NPPY+ + Sbjct: 154 VNPPYVPT 161 >gi|33865682|ref|NP_897241.1| hypothetical protein SYNW1148 [Synechococcus sp. WH 8102] gi|33632852|emb|CAE07663.1| conserved hypothetical protein [Synechococcus sp. WH 8102] Length = 222 Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust. Identities = 44/121 (36%), Positives = 55/121 (45%), Gaps = 29/121 (23%) Query: 76 PETELLVDSA--LAFS-----------LPRIEK----------RDVVRILDLGTGTGAVC 112 PE EL+VD A LA++ L RIE D ILDLG G G + Sbjct: 5 PEPELMVDPAQVLAYAAADFSGGDQRTLDRIEALLSSASGRAASDPAVILDLGCGPGNIS 64 Query: 113 LALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS--ERFDTLQSDWFSSVEGLFDVIVS 170 L L K P + +GVD S L++A+ A G+S R TLQ V D+IVS Sbjct: 65 LPLAKRFPESQVIGVDGSRAMLQVARDRANQQGLSIDLRCSTLQDLALEPV----DLIVS 120 Query: 171 N 171 N Sbjct: 121 N 121 >gi|224282622|ref|ZP_03645944.1| hypothetical protein BbifN4_02239 [Bifidobacterium bifidum NCIMB 41171] gi|310287082|ref|YP_003938340.1| methyltransferase domain [Bifidobacterium bifidum S17] gi|313139781|ref|ZP_07801974.1| 16S RNA methylase RsmC [Bifidobacterium bifidum NCIMB 41171] gi|309251018|gb|ADO52766.1| Conserved hypothetical protein with methyltransferase domain [Bifidobacterium bifidum S17] gi|313132291|gb|EFR49908.1| 16S RNA methylase RsmC [Bifidobacterium bifidum NCIMB 41171] Length = 217 Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust. Identities = 29/80 (36%), Positives = 42/80 (52%), Gaps = 2/80 (2%) Query: 94 EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153 E + +LDLG G G V LAL SP VD++ +AL++ ++NA +NG E Sbjct: 70 EPPETGTLLDLGCGWGPVSLALAFASPKADVWAVDVNERALDLTRANAKSNGC-EHIHAA 128 Query: 154 QSDWFSSVEGLFDVIVSNPP 173 + + + FD I SNPP Sbjct: 129 SPEQVPA-DLTFDAIWSNPP 147 >gi|311063947|ref|YP_003970672.1| 16S RNA methylase [Bifidobacterium bifidum PRL2010] gi|310866266|gb|ADP35635.1| 16S RNA methylase [Bifidobacterium bifidum PRL2010] Length = 217 Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust. Identities = 29/80 (36%), Positives = 42/80 (52%), Gaps = 2/80 (2%) Query: 94 EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153 E + +LDLG G G V LAL SP VD++ +AL++ ++NA +NG E Sbjct: 70 EPPETGTLLDLGCGWGPVSLALAFASPKADVWAVDVNERALDLTRANAKSNGC-EHIHAA 128 Query: 154 QSDWFSSVEGLFDVIVSNPP 173 + + + FD I SNPP Sbjct: 129 SPEQVPA-DLTFDAIWSNPP 147 >gi|154685168|ref|YP_001420329.1| YefA [Bacillus amyloliquefaciens FZB42] gi|154351019|gb|ABS73098.1| YefA [Bacillus amyloliquefaciens FZB42] Length = 464 Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust. Identities = 48/185 (25%), Positives = 86/185 (46%), Gaps = 34/185 (18%) Query: 10 FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILG------WRDFY-- 61 F+ R + I++ D +F +IV+++ + I G W + Y Sbjct: 219 FITRTSDFPHKAKIIE-----DITAQFPHVKSIVQNINPNKTNVIFGNETNVIWGEEYIY 273 Query: 62 ----NVRLTLSSDTF-EPRPE-TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL 115 +V+ +S+ +F + PE T++L D AL ++ E + ++D G G + L L Sbjct: 274 DLIGDVKFAISARSFYQVNPEQTKVLYDKALEYA----ELQGEETVIDAYCGIGTISLFL 329 Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVSE------RFDTLQSDWFSSVEGL-FDVI 168 K++ K GV+I +A+E AK NA NG++ +T+ W+ EG+ D + Sbjct: 330 AKQAK--KVYGVEIVPEAIEDAKRNAELNGITNAEFAVGEAETVIPKWYK--EGITADTL 385 Query: 169 VSNPP 173 V +PP Sbjct: 386 VVDPP 390 >gi|126731920|ref|ZP_01747724.1| putative methyltransferase [Sagittula stellata E-37] gi|126707747|gb|EBA06809.1| putative methyltransferase [Sagittula stellata E-37] Length = 211 Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust. Identities = 30/79 (37%), Positives = 44/79 (55%), Gaps = 3/79 (3%) Query: 93 IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152 I R R +DLG G G + L + +K V VD+S AL+ + NA T GV+ER Sbjct: 38 IAGRPAGRAVDLGCGRGDDAIWLARNG--WKVVAVDVSQAALDTVRRNAETAGVAERVTW 95 Query: 153 LQSDWFSSV-EGLFDVIVS 170 L+ D S+ +G FD+++S Sbjct: 96 LRHDLSKSLPDGPFDLVLS 114 >gi|148270786|ref|YP_001245246.1| ribosomal L11 methyltransferase [Thermotoga petrophila RKU-1] gi|281413091|ref|YP_003347170.1| ribosomal L11 methyltransferase [Thermotoga naphthophila RKU-10] gi|166223499|sp|A5IN97|PRMA_THEP1 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11 Mtase gi|147736330|gb|ABQ47670.1| LSU ribosomal protein L11P methyltransferase [Thermotoga petrophila RKU-1] gi|281374194|gb|ADA67756.1| ribosomal L11 methyltransferase [Thermotoga naphthophila RKU-10] Length = 264 Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust. Identities = 30/73 (41%), Positives = 43/73 (58%), Gaps = 7/73 (9%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL--QSDWF 158 +LD+G GTG + +A K+ + V VD+ +A+E+A+ N N V D L SD Sbjct: 133 VLDVGCGTGILAIAA-KKLGASQVVAVDVDEQAVEVAEENVRKNDV----DVLVKWSDLL 187 Query: 159 SSVEGLFDVIVSN 171 S VEG FD++VSN Sbjct: 188 SEVEGTFDIVVSN 200 >gi|72162084|ref|YP_289741.1| 16S rRNA m(2)G 1207 methyltransferase [Thermobifida fusca YX] gi|71915816|gb|AAZ55718.1| 16S rRNA m(2)G 1207 methyltransferase [Thermobifida fusca YX] Length = 205 Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust. Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 4/77 (5%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS----ERFDTLQSD 156 +LDLG G G + LA+ +P VG+D + +AL +A+ NA N V R + Sbjct: 62 LLDLGCGYGPIALAMALRAPKATVVGIDTNQRALALARRNAEANAVPNVSFHRAPGPEDP 121 Query: 157 WFSSVEGLFDVIVSNPP 173 + G F + SNPP Sbjct: 122 VDPLLRGPFAALWSNPP 138 >gi|289595708|ref|YP_003482404.1| methylase [Aciduliprofundum boonei T469] gi|289533495|gb|ADD07842.1| methylase [Aciduliprofundum boonei T469] Length = 177 Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust. Identities = 24/76 (31%), Positives = 43/76 (56%), Gaps = 4/76 (5%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++L++GTG GA+ + K + VDI +A++ + A + + +T SD F Sbjct: 22 KVLEVGTGNGAIAIECAKSGSSV--LAVDIDKEAVKRLREEAKIKNL--KIETKVSDLFE 77 Query: 160 SVEGLFDVIVSNPPYI 175 +V+G +D I+ NPPY+ Sbjct: 78 NVDGKYDTIIFNPPYL 93 >gi|321313777|ref|YP_004206064.1| ribosomal RNA methyltransferase [Bacillus subtilis BSn5] gi|320020051|gb|ADV95037.1| ribosomal RNA methyltransferase [Bacillus subtilis BSn5] Length = 201 Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust. Identities = 35/101 (34%), Positives = 55/101 (54%), Gaps = 16/101 (15%) Query: 78 TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV---DISCKAL 134 + LL+DS F P +E ILD+G G G + L+L + FK + D++ +A+ Sbjct: 46 SRLLIDS---FEEPEVEGG----ILDVGCGYGPIGLSLASD---FKDRSIHMIDVNERAV 95 Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPP 173 E++ NA NG++ QSD FS+V+ F I++NPP Sbjct: 96 ELSNENAEQNGIT-NVKIYQSDLFSNVDSAQTFASILTNPP 135 >gi|116512245|ref|YP_809461.1| 16S RNA G1207 methylase RsmC [Lactococcus lactis subsp. cremoris SK11] gi|116107899|gb|ABJ73039.1| 16S rRNA m(2)G 1207 methyltransferase [Lactococcus lactis subsp. cremoris SK11] Length = 227 Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust. Identities = 26/73 (35%), Positives = 43/73 (58%), Gaps = 2/73 (2%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LD+G G G + L L K+ + VD++ +AL++ + NA+ N VS L S+ + + Sbjct: 92 LLDVGCGYGTLGLTLAKKFDLSVTM-VDVNSRALDLCRQNAIDNAVSNTEIEL-SNIYEA 149 Query: 161 VEGLFDVIVSNPP 173 V +D I+SNPP Sbjct: 150 VSEKYDAIISNPP 162 >gi|87308463|ref|ZP_01090604.1| UbiE/COQ5 methyltransferase [Blastopirellula marina DSM 3645] gi|87289020|gb|EAQ80913.1| UbiE/COQ5 methyltransferase [Blastopirellula marina DSM 3645] Length = 226 Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust. Identities = 22/73 (30%), Positives = 42/73 (57%), Gaps = 2/73 (2%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LD+GTGT + +AL ++ P + + +D+S L +AK+N +G+ +R D + Sbjct: 54 VLDVGTGTALIPIALCQKLPMARVMAIDMSTAMLTLAKANVDMDGMLDRIQLAHIDAADT 113 Query: 161 --VEGLFDVIVSN 171 +FD+++SN Sbjct: 114 GYENEMFDLVISN 126 >gi|229470502|sp|Q0VPK2|RLMG_ALCBS RecName: Full=Ribosomal RNA large subunit methyltransferase G; AltName: Full=23S rRNA m2G1835 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rlmG Length = 390 Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust. Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 10/87 (11%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS--- 155 ++ DLG G G + +A+LK +P + D S ALE A+ N VS F +S Sbjct: 240 AKVADLGCGNGVIGMAVLKANPAARVTFCDESWLALESARDN-----VSRYFSDAESHFH 294 Query: 156 --DWFSSVEGLFDVIVSNPPYIESVIV 180 D + +E FD I+ NPP+ + +V Sbjct: 295 LGDGLAGLEQRFDCILLNPPFHDGYVV 321 >gi|300070662|gb|ADJ60062.1| 16S RNA G1207 methylase RsmC [Lactococcus lactis subsp. cremoris NZ9000] Length = 227 Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust. Identities = 26/73 (35%), Positives = 43/73 (58%), Gaps = 2/73 (2%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LD+G G G + L L K+ + VD++ +AL++ + NA+ N VS L S+ + + Sbjct: 92 LLDVGCGYGTLGLTLAKKFDLSVTM-VDVNSRALDLCRQNAIDNAVSNTEIEL-SNIYEA 149 Query: 161 VEGLFDVIVSNPP 173 V +D I+SNPP Sbjct: 150 VSEKYDAIISNPP 162 >gi|240102588|ref|YP_002958897.1| SAM-dependent rRNA adenine methyltransferase, putative [Thermococcus gammatolerans EJ3] gi|239910142|gb|ACS33033.1| SAM-dependent rRNA adenine methyltransferase, putative [Thermococcus gammatolerans EJ3] Length = 206 Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust. Identities = 40/124 (32%), Positives = 54/124 (43%), Gaps = 27/124 (21%) Query: 101 ILDLGTGTG--AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 + DLGTGTG A+ LL K V++ KALE+AK NA +GV F +Q+D Sbjct: 51 VADLGTGTGVLAIGAKLLGAE---KVYAVEVDPKALEVAKRNAERSGVEVEF--IQAD-V 104 Query: 159 SSVEGLFDVIVSNPPY-----------------IESVI--VDCLGLEVRDFDPRISLDGG 199 S D +V NPP+ + + + + LEVR F R S D G Sbjct: 105 SEFSERVDTVVMNPPFGSQKKGADRPFLLKAFEVSNTVYSIHLAKLEVRSFIERFSADNG 164 Query: 200 IDGL 203 Sbjct: 165 FTAF 168 >gi|303243574|ref|ZP_07329916.1| methyltransferase small [Methanothermococcus okinawensis IH1] gi|302486135|gb|EFL49057.1| methyltransferase small [Methanothermococcus okinawensis IH1] Length = 201 Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust. Identities = 38/135 (28%), Positives = 63/135 (46%), Gaps = 13/135 (9%) Query: 45 SLKHESIHRILGWRDFY-NVRLTLSSDT--FEPRPETELLVDSALAFSLPRIEKRDVVRI 101 S K ES H+ + N +LT +DT F P+ +D + ++ + Sbjct: 5 SEKPESAHKEITIEGILRNKKLTFKTDTGIFSPKK-----IDKGTKILVEALKLNKNYDV 59 Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS--ERFDTLQSDWFS 159 LD+G G G V +A+ E DI+ +A+ +AK N N S + +Q D + Sbjct: 60 LDIGCGYGVVGIAIADEVNSI--TMTDINKRAVRLAKENIKLNDTSKDKNIRVVQGDLYE 117 Query: 160 SVEGL-FDVIVSNPP 173 +V+ +D+I+SNPP Sbjct: 118 NVKDKNYDMIISNPP 132 >gi|261819598|ref|YP_003257704.1| ribosomal protein L11 methyltransferase [Pectobacterium wasabiae WPP163] gi|261603611|gb|ACX86097.1| ribosomal protein L11 methyltransferase [Pectobacterium wasabiae WPP163] Length = 295 Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust. Identities = 41/120 (34%), Positives = 61/120 (50%), Gaps = 18/120 (15%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159 I+D G G+G + +A LK + +G+DI +A++ ++ NA NGVSER + L D + Sbjct: 162 IIDFGCGSGILAIAALKLG-AARAIGIDIDPQAIQASRDNAQRNGVSERLELYLPKDQPA 220 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS---LDGGIDGLSH-YRTIADGVSR 215 + DV+V+N L +R+ P IS GG GLS T ADGV+ Sbjct: 221 DLSA--DVVVAN----------ILAGPLRELAPLISDLPKAGGHLGLSGVLSTQADGVAE 268 >gi|20090299|ref|NP_616374.1| HemK related protein [Methanosarcina acetivorans C2A] gi|19915299|gb|AAM04854.1| HemK related protein [Methanosarcina acetivorans C2A] Length = 202 Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust. Identities = 33/121 (27%), Positives = 60/121 (49%), Gaps = 11/121 (9%) Query: 59 DFYNVRLTLSSD--TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116 ++ N R+ L + +EP ++ LL D+AL E + +R+L++G G+G V L Sbjct: 5 EYKNTRVKLGASDLVYEPAEDSFLLADAALE------EAKPGMRVLEIGAGSGFVSAVLR 58 Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE 176 + +I+ A AK+N + ++ F L+ S + FD+I+ NPPY+ Sbjct: 59 ANVEDIRIFATEINPHAARCAKANGIEVIRTDLFRGLKP---GSSKTSFDLILFNPPYLP 115 Query: 177 S 177 + Sbjct: 116 T 116 >gi|300173179|ref|YP_003772345.1| RNA methyltransferase [Leuconostoc gasicomitatum LMG 18811] gi|299887558|emb|CBL91526.1| RNA methyltransferase [Leuconostoc gasicomitatum LMG 18811] Length = 253 Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust. Identities = 30/79 (37%), Positives = 44/79 (55%), Gaps = 9/79 (11%) Query: 102 LDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVSERFDTLQSDW-- 157 +DLG GTGAV L +P G+ V+I + E+AK + NG+ +R LQSD Sbjct: 53 VDLGAGTGAVGLFY---APKVAGLIKLVEIQPELAEMAKRSIAMNGLQDRVSVLQSDMKA 109 Query: 158 -FSSVE-GLFDVIVSNPPY 174 F ++ G + ++SNPPY Sbjct: 110 IFDDIQPGSAETVLSNPPY 128 >gi|257469152|ref|ZP_05633246.1| methyltransferase [Fusobacterium ulcerans ATCC 49185] gi|317063399|ref|ZP_07927884.1| methyltransferase [Fusobacterium ulcerans ATCC 49185] gi|313689075|gb|EFS25910.1| methyltransferase [Fusobacterium ulcerans ATCC 49185] Length = 244 Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust. Identities = 37/131 (28%), Positives = 66/131 (50%), Gaps = 15/131 (11%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 +DS L I K ++ I+DLGTG GA+ L L K++ K G++I + ++A+ N Sbjct: 30 LDSLLISEFASITK-NINNIVDLGTGNGAIPLFLSKKTK-AKITGIEIQEISSDLARRNI 87 Query: 142 VTNGVSERFDTLQSD------WFSSVEGLFDVIVSNPPYI-----ESVIVDCLGLEVRDF 190 N + ++ + D +F++ D++VSNPP+ E ++ D L + Sbjct: 88 KLNNLEDQITIINDDMKNWRKYFTT--HTLDMVVSNPPFFKFNGNEELLNDLTQLTLARH 145 Query: 191 DPRISLDGGID 201 + I+LD I+ Sbjct: 146 EISITLDTLIE 156 >gi|283797151|ref|ZP_06346304.1| putative N-6 adenine-specific DNA methylase [Clostridium sp. M62/1] gi|291075568|gb|EFE12932.1| putative N-6 adenine-specific DNA methylase [Clostridium sp. M62/1] Length = 250 Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust. Identities = 30/100 (30%), Positives = 48/100 (48%), Gaps = 8/100 (8%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R LDLGTGTG + + L ++ G++I E+A+ + NG+ + + + D Sbjct: 53 RALDLGTGTGIIPILLEAKTEGSYFAGLEIQENMAEMARRSVWLNGLEGKIEIVTGDIKE 112 Query: 160 SVE----GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195 + FDV+ SNPPY+ D GL+ D I+ Sbjct: 113 AGRIFGAASFDVVTSNPPYMN----DSHGLKNPDLPKAIA 148 >gi|330890549|gb|EGH23210.1| HemK family modification methylase [Pseudomonas syringae pv. mori str. 301020] Length = 314 Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust. Identities = 32/79 (40%), Positives = 45/79 (56%), Gaps = 1/79 (1%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 + R +D+G GTGA L + P + VDI+ KAL A+ NA G+ E SD Sbjct: 135 ISRAVDIGGGTGAGALLIAVARPQAQVYAVDINPKALHFAQINARVAGL-ENMQCCHSDI 193 Query: 158 FSSVEGLFDVIVSNPPYIE 176 S + G FD+IV+NPPY++ Sbjct: 194 LSGLTGNFDLIVANPPYMK 212 >gi|331229677|ref|XP_003327504.1| S-adenosylmethionine-dependent methyltransferase [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309306494|gb|EFP83085.1| S-adenosylmethionine-dependent methyltransferase [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 371 Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust. Identities = 41/165 (24%), Positives = 60/165 (36%), Gaps = 43/165 (26%) Query: 60 FYNVRLTLSSDTFEPRPETELLV-----------------------DSALAFSLPRIEKR 96 F ++ T+ PRPETE V ++ P+ + Sbjct: 66 FGDLTFTIRPPILIPRPETEQWVTELSRTMNSYFQAIRSSRPSADESTSPHLPAPKQSRP 125 Query: 97 DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 ++LDLGTG+G + L VGVDI A S ++T Sbjct: 126 SSFKVLDLGTGSGCISNYLAYHHQDVHAVGVDIDQDANLKQASQSLTG------------ 173 Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201 FD+I+SNPPYI L V+ ++ I+L G D Sbjct: 174 --------FDMIISNPPYIPLPDYHHLPQSVKGWESSIALIGDRD 210 >gi|258648434|ref|ZP_05735903.1| SAM-dependent methyltransferase [Prevotella tannerae ATCC 51259] gi|260851184|gb|EEX71053.1| SAM-dependent methyltransferase [Prevotella tannerae ATCC 51259] Length = 232 Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust. Identities = 26/84 (30%), Positives = 48/84 (57%), Gaps = 6/84 (7%) Query: 100 RILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD-- 156 RILD+GTG+G + L L + + G+ +D + A A+ N + ++R + +D Sbjct: 39 RILDIGTGSGLIALMLAQRTDAMITGIEIDPASAAQ--AQENVAASPWADRLQIVATDIA 96 Query: 157 WFSSVEGLFDVIVSNPPYIESVIV 180 ++S + FD+IVSNPP+ +++ Sbjct: 97 GYTSYQA-FDLIVSNPPFFNEMLL 119 >gi|218134398|ref|ZP_03463202.1| hypothetical protein BACPEC_02301 [Bacteroides pectinophilus ATCC 43243] gi|217989783|gb|EEC55794.1| hypothetical protein BACPEC_02301 [Bacteroides pectinophilus ATCC 43243] Length = 254 Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust. Identities = 26/98 (26%), Positives = 51/98 (52%), Gaps = 6/98 (6%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 +D+ L + + + DV +DL TG G + + + ++ G++I ++ E+A+ + Sbjct: 35 IDAVLLANYAVVNEGDVC--MDLCTGNGIIPVLMEAKTKGKHYTGLEIQKESAELARKSV 92 Query: 142 VTNGVSERFDTLQSDWFSSV----EGLFDVIVSNPPYI 175 N ++R D + D ++V G FDV+ NPPY+ Sbjct: 93 ELNNTADRIDIVNDDLKNAVALYKRGRFDVVTVNPPYM 130 >gi|331696189|ref|YP_004332428.1| methylase [Pseudonocardia dioxanivorans CB1190] gi|326950878|gb|AEA24575.1| methylase [Pseudonocardia dioxanivorans CB1190] Length = 215 Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust. Identities = 42/123 (34%), Positives = 56/123 (45%), Gaps = 11/123 (8%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 +LDLGTGTGA LAL + V VD+S + + + N + + R + D + Sbjct: 32 VLDLGTGTGA--LALTGARAGAQSVTAVDLSRRCVATTRLNFLLHRRPVRVH--RGDLYE 87 Query: 160 SVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 V G F +IV+NPPY+ S L R S D G G + I DG HL Sbjct: 88 PVRGRRFGLIVANPPYVPSE-TSVLPRHTRGR----SWDAGPTGRAILDRICDGAPEHLE 142 Query: 219 KDG 221 DG Sbjct: 143 DDG 145 >gi|320539203|ref|ZP_08038874.1| putative S-adenosyl-L-methionine-dependent methyltransferase [Serratia symbiotica str. Tucson] gi|320030841|gb|EFW12849.1| putative S-adenosyl-L-methionine-dependent methyltransferase [Serratia symbiotica str. Tucson] Length = 248 Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust. Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 4/85 (4%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 R+LD+G+G+G + L L + S + V++ A E A+ N + +R D + Sbjct: 50 RVLDIGSGSGLIALMLAQRSAAEVMIDAVELDEAAAEQARDNVQKSPWPQRIKVYAQDIY 109 Query: 159 SSVE---GLFDVIVSNPPYIESVIV 180 E +D+IVSNPPY E + Sbjct: 110 YYAEHHAAQYDLIVSNPPYFEPAVA 134 >gi|296130592|ref|YP_003637842.1| methyltransferase small [Cellulomonas flavigena DSM 20109] gi|296022407|gb|ADG75643.1| methyltransferase small [Cellulomonas flavigena DSM 20109] Length = 515 Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust. Identities = 39/128 (30%), Positives = 58/128 (45%), Gaps = 11/128 (8%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSDWF 158 R+LDLGTG G L + + V D+S +AL A+ G+ +R + Sbjct: 171 RVLDLGTGCGVQALHASRHAAHV--VATDLSPRALAFARFTTALAGLGPDRVSLREGSML 228 Query: 159 SSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217 V G FD++VSNPP+ ++ G +V +D R DGG G R + GV L Sbjct: 229 EPVAGETFDLVVSNPPF----VITPRGADVPAYDYR---DGGRSGDDLVRDLVTGVGDVL 281 Query: 218 NKDGLCSV 225 G+ + Sbjct: 282 APGGVAQL 289 >gi|261401204|ref|ZP_05987329.1| methyltransferase domain protein [Neisseria lactamica ATCC 23970] gi|269208782|gb|EEZ75237.1| methyltransferase domain protein [Neisseria lactamica ATCC 23970] Length = 367 Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust. Identities = 33/120 (27%), Positives = 61/120 (50%), Gaps = 14/120 (11%) Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 LD+GTG+G V A+L + +G D + +A+ A++N G+ ++ + ++D F + Sbjct: 193 LDIGTGSG-VLAAILAKQGIPSVIGTDTNPRAVACARANIARLGLEKQVEIRETDMFPDM 251 Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221 D+IV NPP++ + +E +DP ++ L+ + A +HLN DG Sbjct: 252 RA--DLIVCNPPWLPAKPTSA--VESALYDPDSAM------LAAFLRDA---PKHLNPDG 298 >gi|269796546|ref|YP_003316001.1| methyltransferase family protein [Sanguibacter keddieii DSM 10542] gi|269098731|gb|ACZ23167.1| methyltransferase family protein [Sanguibacter keddieii DSM 10542] Length = 549 Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust. Identities = 31/78 (39%), Positives = 40/78 (51%), Gaps = 5/78 (6%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 R+LDLGTG G L + + V DIS +AL A NA +GV R D Sbjct: 185 TRVLDLGTGCGIQALHASRHAQTV--VATDISERALRFAAFNAALDGV--RLDLRLGSML 240 Query: 159 SSVEGL-FDVIVSNPPYI 175 V G FD++VSNPP++ Sbjct: 241 EPVAGEEFDLVVSNPPFV 258 >gi|219670303|ref|YP_002460738.1| ribosomal protein L11 methyltransferase [Desulfitobacterium hafniense DCB-2] gi|254783300|sp|B8FUN2|PRMA_DESHD RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11 Mtase gi|219540563|gb|ACL22302.1| ribosomal protein L11 methyltransferase [Desulfitobacterium hafniense DCB-2] Length = 312 Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust. Identities = 47/186 (25%), Positives = 82/186 (44%), Gaps = 30/186 (16%) Query: 34 QRFFLTNAIVRSLKHESIHRILGWRDFYN-VRL------TLSSDTFEPRPETELL-VDSA 85 QRF V+ L + W+ ++ VR+ S + P PE +L +D Sbjct: 89 QRFPEWVLQVKGLTVQEEDWATSWKAYFKPVRIGRHFLIKPSWEEVTPLPEDIILELDPG 148 Query: 86 LAF-------------SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCK 132 +AF +L K D+ RI DLGTG+G + +A K + + D+ Sbjct: 149 MAFGTGTHATTSLCLETLEETVKPDM-RIFDLGTGSGILAIAAAKLGAQVEAI--DLDSV 205 Query: 133 ALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDP 192 A+++A+ N N V++R Q D + ++G D++V+N +I D + + + D Sbjct: 206 AVKVAQENVELNQVADRISVRQGDLGTVLQGQADLVVAN------IIADVILMLIPDLKR 259 Query: 193 RISLDG 198 + DG Sbjct: 260 IMKEDG 265 >gi|317123694|ref|YP_004097806.1| methyltransferase small [Intrasporangium calvum DSM 43043] gi|315587782|gb|ADU47079.1| methyltransferase small [Intrasporangium calvum DSM 43043] Length = 506 Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust. Identities = 43/127 (33%), Positives = 59/127 (46%), Gaps = 12/127 (9%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R LDLGTG G L L + V DIS +AL A+ NA G+ D + D Sbjct: 168 RALDLGTGCGVQALHLAGHTGSI--VATDISERALAFARFNAALAGLD--VDLRRGDLLD 223 Query: 160 SVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 V G F +IVSNPP++ + D +V ++ R DGG G + RT+ V L Sbjct: 224 PVAGERFSLIVSNPPFVITPRAD----DVPVYEYR---DGGRSGDAIVRTLVRTVRDALE 276 Query: 219 KDGLCSV 225 G+ + Sbjct: 277 PGGVAQL 283 >gi|259415189|ref|ZP_05739111.1| methyltransferase small [Silicibacter sp. TrichCH4B] gi|259349099|gb|EEW60853.1| methyltransferase small [Silicibacter sp. TrichCH4B] Length = 262 Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust. Identities = 34/120 (28%), Positives = 53/120 (44%), Gaps = 8/120 (6%) Query: 60 FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119 F R+TL F+P+ VD L + + R +L+LG G G L L Sbjct: 17 FLGGRITL----FQPKSGYRAGVDPVLLAAA--VNARPGQSVLELGCGAGQAFLCLAARV 70 Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ-SDWFSSV-EGLFDVIVSNPPYIES 177 K GV++ E+A+ NA N + T SD + + + FD +++NPPY + Sbjct: 71 QDLKITGVELQAAYAELARRNAAENATAAHVATANLSDLPADLRQQRFDHVIANPPYYRA 130 >gi|226222880|ref|YP_002756987.1| hypothetical protein Lm4b_00272 [Listeria monocytogenes Clip81459] gi|225875342|emb|CAS04039.1| unnamed protein product [Listeria monocytogenes serotype 4b str. CLIP 80459] Length = 201 Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust. Identities = 26/74 (35%), Positives = 40/74 (54%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 +ILD+G G G + L + K P + VD++ +ALE+AK NA N ++ S + S Sbjct: 62 KILDVGCGYGPMGLTVAKVFPDSQIEMVDVNLRALELAKENAEINKITNTHIYESSVYDS 121 Query: 160 SVEGLFDVIVSNPP 173 + I+SNPP Sbjct: 122 VTANDYQAIISNPP 135 >gi|261378754|ref|ZP_05983327.1| methyltransferase domain protein [Neisseria cinerea ATCC 14685] gi|269144909|gb|EEZ71327.1| methyltransferase domain protein [Neisseria cinerea ATCC 14685] Length = 367 Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust. Identities = 37/129 (28%), Positives = 63/129 (48%), Gaps = 21/129 (16%) Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 LD+GTG+G V A+L + +G D + +A+ A++N G+ ++ + ++D F + Sbjct: 193 LDIGTGSG-VLAAILAKQGISSVIGTDTNPRAVACARANIARLGLEKQVEIRETDMFPDM 251 Query: 162 EGLFDVIVSNPPY--------IESVIVD----CLGLEVRDFDPRISLDGGIDGLSHYRTI 209 D+IV NPP+ IES + D L +RD ++ DG I R I Sbjct: 252 RA--DLIVCNPPWLPAKPTSAIESALYDPDSAMLTAFLRDAPEHLNPDGEI------RLI 303 Query: 210 ADGVSRHLN 218 ++ HL+ Sbjct: 304 ISDLAEHLH 312 >gi|308172559|ref|YP_003919264.1| RNA methyltransferase, TrmA family [Bacillus amyloliquefaciens DSM 7] gi|307605423|emb|CBI41794.1| RNA methyltransferase, TrmA family [Bacillus amyloliquefaciens DSM 7] gi|328552324|gb|AEB22816.1| RNA methyltransferase, TrmA family protein [Bacillus amyloliquefaciens TA208] gi|328910668|gb|AEB62264.1| RNA methyltransferase, TrmA family [Bacillus amyloliquefaciens LL3] Length = 458 Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust. Identities = 48/185 (25%), Positives = 86/185 (46%), Gaps = 34/185 (18%) Query: 10 FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILG------WRDFY-- 61 F+ R + I++ D +F +IV+++ + I G W + Y Sbjct: 219 FITRTSDFPHKAKIIE-----DITAQFPHVKSIVQNINPNKTNVIFGNETSVIWGEEYIY 273 Query: 62 ----NVRLTLSSDTF-EPRPE-TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL 115 +V+ +S+ +F + PE T++L D AL ++ E + ++D G G + L L Sbjct: 274 DLIGDVKFAISARSFYQVNPEQTKVLYDKALEYA----ELQGKETVIDAYCGIGTISLFL 329 Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVSE------RFDTLQSDWFSSVEGL-FDVI 168 K++ K GV+I +A+E AK NA NG++ +T+ W+ EG+ D + Sbjct: 330 AKQAK--KVYGVEIVPEAIEDAKRNAELNGITNAEFAVGEAETVIPKWYE--EGITADTL 385 Query: 169 VSNPP 173 V +PP Sbjct: 386 VVDPP 390 >gi|253576898|ref|ZP_04854223.1| methyltransferase [Paenibacillus sp. oral taxon 786 str. D14] gi|251843765|gb|EES71788.1| methyltransferase [Paenibacillus sp. oral taxon 786 str. D14] Length = 251 Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust. Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 5/80 (6%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 +ILDL TG G + L LL K G++I + ++A+ + NG++ R + + D Sbjct: 49 KILDLCTGNGVIPL-LLSTRTEAKIEGIEIQPRLADMARRSVEMNGLTHRIEIREGDLRE 107 Query: 160 SV----EGLFDVIVSNPPYI 175 V G++D I NPPY+ Sbjct: 108 LVRVTGHGVYDAITVNPPYM 127 >gi|296122425|ref|YP_003630203.1| methyltransferase small [Planctomyces limnophilus DSM 3776] gi|296014765|gb|ADG68004.1| methyltransferase small [Planctomyces limnophilus DSM 3776] Length = 390 Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust. Identities = 32/107 (29%), Positives = 50/107 (46%), Gaps = 3/107 (2%) Query: 93 IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152 IE + +I+DLG G+G V +A P + VD + +A+E + A NG S Sbjct: 218 IEPMEQGQIVDLGCGSGGVAVAAALRHPELDVLAVDSNPRAIECTQWAAKENGTSRVQTR 277 Query: 153 LQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199 L + S DV+ +NPPY + + + +E RI + GG Sbjct: 278 LDATGKSLESNSVDVVYANPPYFSNYKIAGIFIETAF---RILIPGG 321 >gi|283851152|ref|ZP_06368436.1| methyltransferase small [Desulfovibrio sp. FW1012B] gi|283573548|gb|EFC21524.1| methyltransferase small [Desulfovibrio sp. FW1012B] Length = 259 Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust. Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 10/84 (11%) Query: 100 RILDLGTGTGAVCLA--LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT----- 152 R LDLGTG G L L ++ P +G+D +E A+ NA G+++RFD Sbjct: 41 RALDLGTGCGPAGLGWMLARQDPEATVLGLDKDPAMVEAARENARRLGLADRFDARLLDV 100 Query: 153 --LQSDWFSSVEGLFDVIVSNPPY 174 L +D V G D++++NPPY Sbjct: 101 RDLGTDA-GLVPGSCDLVLANPPY 123 >gi|253686645|ref|YP_003015835.1| ribosomal protein L11 methyltransferase [Pectobacterium carotovorum subsp. carotovorum PC1] gi|259534546|sp|C6DIJ9|PRMA_PECCP RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11 Mtase gi|251753223|gb|ACT11299.1| ribosomal protein L11 methyltransferase [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 295 Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust. Identities = 41/120 (34%), Positives = 61/120 (50%), Gaps = 18/120 (15%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159 I+D G G+G + +A LK + +G+DI +A++ ++ NA NGVSER + L D + Sbjct: 162 IIDFGCGSGILAIAALKLG-AARAIGIDIDPQAIQASRDNAQRNGVSERLELYLPKDQPA 220 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS---LDGGIDGLSH-YRTIADGVSR 215 + DV+V+N L +R+ P IS GG GLS T ADGV+ Sbjct: 221 DLSA--DVVVAN----------ILAGPLRELAPLISDLPKAGGHLGLSGVLATQADGVAE 268 >gi|218438218|ref|YP_002376547.1| methyltransferase type 12 [Cyanothece sp. PCC 7424] gi|218170946|gb|ACK69679.1| Methyltransferase type 12 [Cyanothece sp. PCC 7424] Length = 242 Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust. Identities = 27/81 (33%), Positives = 44/81 (54%), Gaps = 5/81 (6%) Query: 76 PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135 P+ E ++D ++ P +E +IL+LG GTG + L LL P K V +D S + + Sbjct: 24 PKYEEVLDVIVSLVPPGVE-----QILELGCGTGELSLKLLNRYPKVKIVALDYSERMIT 78 Query: 136 IAKSNAVTNGVSERFDTLQSD 156 A++ V G S+R+ +Q D Sbjct: 79 YAQTKIVDKGYSDRWKGVQLD 99 >gi|89895874|ref|YP_519361.1| ribosomal protein L11 methylase [Desulfitobacterium hafniense Y51] gi|122481887|sp|Q24SS5|PRMA_DESHY RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11 Mtase gi|89335322|dbj|BAE84917.1| ribosomal protein L11 methylase [Desulfitobacterium hafniense Y51] Length = 312 Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust. Identities = 47/186 (25%), Positives = 82/186 (44%), Gaps = 30/186 (16%) Query: 34 QRFFLTNAIVRSLKHESIHRILGWRDFYN-VRL------TLSSDTFEPRPETELL-VDSA 85 QRF V+ L + W+ ++ VR+ S + P PE +L +D Sbjct: 89 QRFPEWVLQVKGLTVQEEDWATSWKAYFKPVRIGRHFLIKPSWEEVTPLPEDIILELDPG 148 Query: 86 LAF-------------SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCK 132 +AF +L K D+ RI DLGTG+G + +A K + + D+ Sbjct: 149 MAFGTGTHATTSLCLETLEETVKPDM-RIFDLGTGSGILAIAAAKLGAQVEAI--DLDSV 205 Query: 133 ALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDP 192 A+++A+ N N V++R Q D + ++G D++V+N +I D + + + D Sbjct: 206 AVKVAQENVELNQVADRISVRQGDLGTVLQGQADLVVAN------IIADVILMLIPDLKR 259 Query: 193 RISLDG 198 + DG Sbjct: 260 IMKEDG 265 >gi|313620910|gb|EFR92088.1| methyltransferase [Listeria innocua FSL S4-378] Length = 143 Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust. Identities = 25/74 (33%), Positives = 40/74 (54%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 +ILD+G G G + L + K P + VD++ +ALE+AK NA N ++ S + + Sbjct: 4 KILDVGCGYGPMGLTVAKAFPDSQIEMVDVNLRALELAKENAEINKITNTHIYESSVYDN 63 Query: 160 SVEGLFDVIVSNPP 173 + I+SNPP Sbjct: 64 VTANDYQAIISNPP 77 >gi|307299352|ref|ZP_07579153.1| methyltransferase small [Thermotogales bacterium mesG1.Ag.4.2] gi|306915148|gb|EFN45534.1| methyltransferase small [Thermotogales bacterium mesG1.Ag.4.2] Length = 202 Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust. Identities = 31/74 (41%), Positives = 40/74 (54%), Gaps = 3/74 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 ILDLG G GAV + L E P K D++ +AL +K NA + + D + D FS Sbjct: 65 ILDLGCGYGAVGITLKLEHPDLKLHMSDVNTRALTFSKINARDHNILA--DIRKGDLFSP 122 Query: 161 VEGL-FDVIVSNPP 173 E FD I+SNPP Sbjct: 123 WEKTSFDSILSNPP 136 >gi|260664919|ref|ZP_05865770.1| 16S RNA methylase RsmC [Lactobacillus jensenii SJ-7A-US] gi|313472534|ref|ZP_07813024.1| methyltransferase domain protein [Lactobacillus jensenii 1153] gi|239529969|gb|EEQ68970.1| methyltransferase domain protein [Lactobacillus jensenii 1153] gi|260561402|gb|EEX27375.1| 16S RNA methylase RsmC [Lactobacillus jensenii SJ-7A-US] Length = 203 Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust. Identities = 24/73 (32%), Positives = 44/73 (60%), Gaps = 1/73 (1%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 ILD+G G G + L K+ P + VD++ +A+++A+ NA NGV+ + S + + Sbjct: 67 ILDVGCGYGPIGLFAAKKWPERQVDMVDVNERAMDLARKNAEVNGVTNA-NIFASSVYEN 125 Query: 161 VEGLFDVIVSNPP 173 V+ + +I++NPP Sbjct: 126 VDKQYAMILTNPP 138 >gi|302384472|ref|YP_003820294.1| Methyltransferase type 11 [Clostridium saccharolyticum WM1] gi|302195100|gb|ADL02671.1| Methyltransferase type 11 [Clostridium saccharolyticum WM1] Length = 245 Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust. Identities = 29/100 (29%), Positives = 47/100 (47%), Gaps = 8/100 (8%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 + +DLGTGTG + L L ++ G++I E+A+ + N + E+ + D Sbjct: 48 KAVDLGTGTGIIPLLLEAKNQGIHYTGLEIQEAMAEMARRSVALNHLEEKITIVTGDIKE 107 Query: 160 SVE----GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195 + FDV+ SNPPY+ D GL+ D I+ Sbjct: 108 ASRLFGAASFDVVTSNPPYMN----DSHGLKNPDLPKAIA 143 >gi|255016895|ref|ZP_05289021.1| hypothetical protein LmonF_01871 [Listeria monocytogenes FSL F2-515] Length = 184 Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust. Identities = 25/74 (33%), Positives = 40/74 (54%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 +ILD+G G G + L + K P + VD++ +ALE+AK NA N ++ S + + Sbjct: 62 KILDVGCGYGPMGLTVAKAFPDSQIEMVDVNLRALELAKENAEINKITNTHIYESSVYDN 121 Query: 160 SVEGLFDVIVSNPP 173 + I+SNPP Sbjct: 122 VTANDYQAIISNPP 135 >gi|269925374|ref|YP_003321997.1| putative RNA methylase [Thermobaculum terrenum ATCC BAA-798] gi|269789034|gb|ACZ41175.1| putative RNA methylase [Thermobaculum terrenum ATCC BAA-798] Length = 360 Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust. Identities = 31/98 (31%), Positives = 54/98 (55%), Gaps = 7/98 (7%) Query: 82 VDSALAFSLPRIEKR---DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAK 138 ++S +A+ + R+ + DV I++LG G+G + + L+ P VGVDI +AL A+ Sbjct: 190 INSTVAYVMARLSEPSAGDV--IVNLGCGSGTILIERLEMLPAKAVVGVDIDPEALACAR 247 Query: 139 SNAVTNGVSERFDTLQSDWFSS--VEGLFDVIVSNPPY 174 N G++ + D L+ D S+ G DVI ++ P+ Sbjct: 248 RNVYAAGLTGKVDLLRGDMRSTGLNSGFADVIYADLPF 285 >gi|291243854|ref|XP_002741815.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii] Length = 217 Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust. Identities = 55/203 (27%), Positives = 91/203 (44%), Gaps = 20/203 (9%) Query: 72 FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL---ALLKESPFFKGVGVD 128 +EP +T LL+D AL ++ + +++G G G V +LLK G D Sbjct: 19 YEPAEDTFLLLD-ALEKEFETLQNLRPLICVEVGCGAGVVITFLASLLKSDTLC--FGTD 75 Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIESVIVDCLG 184 I+ A ++++ + NG++ +T+ SD ++++ GL DV++ NPPY+ + Sbjct: 76 INYNAAQLSQKTSNQNGMT--VNTIVSDLVNALQPRLNGLIDVLIFNPPYVLTP-----S 128 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR-IFESRK 243 EV D S GGIDG I + L+ G+ + I K D + I S Sbjct: 129 EEVGSRDIVASWAGGIDGRQVIDRILPIIPTVLSPKGVFYLLILKENKQDEIEDIMNSHG 188 Query: 244 LFLVNAFKDYGGNDR--VLLFCR 264 + + G +R VL F R Sbjct: 189 FEMAVVLQRRTGPERLSVLKFTR 211 >gi|149278374|ref|ZP_01884511.1| hypothetical protein PBAL39_19624 [Pedobacter sp. BAL39] gi|149230744|gb|EDM36126.1| hypothetical protein PBAL39_19624 [Pedobacter sp. BAL39] Length = 235 Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust. Identities = 38/110 (34%), Positives = 54/110 (49%), Gaps = 8/110 (7%) Query: 97 DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS- 155 D RILD+GTGTG + L L + P + V+I A E A N ++ S R + Sbjct: 37 DSGRILDIGTGTGVIALMLAQRFPLAQVDAVEIDGVAAERAGLNFRSSDFSSRTTAHHTS 96 Query: 156 --DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203 D+ S+ +D+IVSNPP+ + D EVR R + + DGL Sbjct: 97 IMDYESTHP--YDLIVSNPPFF---VNDLKNPEVRKGIARHADEQFFDGL 141 >gi|169605047|ref|XP_001795944.1| hypothetical protein SNOG_05539 [Phaeosphaeria nodorum SN15] gi|111065483|gb|EAT86603.1| hypothetical protein SNOG_05539 [Phaeosphaeria nodorum SN15] Length = 301 Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust. Identities = 40/140 (28%), Positives = 65/140 (46%), Gaps = 15/140 (10%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 ++D+ G+GA + + + P + +G+D++ +AL + NA G F +SD +++ Sbjct: 115 VVDVCCGSGAGAIHMARTYPHAEVIGLDLNPRALSLGGVNARLAGTEVTFH--ESDLYAA 172 Query: 161 VEGLF-----DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID-GLSHYRTIADGVS 214 V D+IVSNPPYI S + D I DGG + GL I + Sbjct: 173 VPETLKSSGIDLIVSNPPYIASC-------PKNEEDLPIYADGGAEFGLDISLRIVEEGM 225 Query: 215 RHLNKDGLCSVEIGYNQKVD 234 + L +G+ V G VD Sbjct: 226 KILASNGMIIVYTGVAIPVD 245 >gi|110834309|ref|YP_693168.1| ribosomal ribonucleate guanine-2-methyltransferase [Alcanivorax borkumensis SK2] gi|110647420|emb|CAL16896.1| ribosomal ribonucleate guanine-2-methyltransferase [Alcanivorax borkumensis SK2] Length = 416 Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust. Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 10/87 (11%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS--- 155 ++ DLG G G + +A+LK +P + D S ALE A+ N VS F +S Sbjct: 266 AKVADLGCGNGVIGMAVLKANPAARVTFCDESWLALESARDN-----VSRYFSDAESHFH 320 Query: 156 --DWFSSVEGLFDVIVSNPPYIESVIV 180 D + +E FD I+ NPP+ + +V Sbjct: 321 LGDGLAGLEQRFDCILLNPPFHDGYVV 347 >gi|152973948|ref|YP_001373465.1| methyltransferase small [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152022700|gb|ABS20470.1| methyltransferase small [Bacillus cytotoxicus NVH 391-98] Length = 199 Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust. Identities = 34/87 (39%), Positives = 49/87 (56%), Gaps = 5/87 (5%) Query: 87 AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146 AF +P I+ ILD+G G G + L+L KE + VD++ +ALE+AK NA N Sbjct: 52 AFQMPDIDGD----ILDVGCGYGPIGLSLAKEFRGRRVHMVDVNERALELAKENAANN-N 106 Query: 147 SERFDTLQSDWFSSVEGLFDVIVSNPP 173 E QS+ + V+G + I+SNPP Sbjct: 107 VENIRIFQSNVYEKVDGQYAAILSNPP 133 >gi|332706167|ref|ZP_08426236.1| methyltransferase domain protein [Lyngbya majuscula 3L] gi|332355004|gb|EGJ34475.1| methyltransferase domain protein [Lyngbya majuscula 3L] Length = 404 Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust. Identities = 28/86 (32%), Positives = 43/86 (50%), Gaps = 1/86 (1%) Query: 84 SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143 +A +F +R+ +RILD G GTG L+ +P VG+D+S AL++A+ Sbjct: 41 AAYSFCTGHTPQREEIRILDAGCGTGVGTEYLVHLNPQASVVGIDLSAGALKVAQERCRR 100 Query: 144 NGVSE-RFDTLQSDWFSSVEGLFDVI 168 +G F L +EG FD+I Sbjct: 101 SGADRVEFHHLSLYDVDQIEGQFDLI 126 >gi|229825148|ref|ZP_04451217.1| hypothetical protein GCWU000182_00499 [Abiotrophia defectiva ATCC 49176] gi|229790520|gb|EEP26634.1| hypothetical protein GCWU000182_00499 [Abiotrophia defectiva ATCC 49176] Length = 244 Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust. Identities = 27/81 (33%), Positives = 47/81 (58%), Gaps = 7/81 (8%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R++DLGTGTG + L L ++ G++I ++ ++A+ + V N ++ + + D Sbjct: 48 RVIDLGTGTGILPLLLWAKTEGEHFTGLEIQEESADMARRSVVGNNIT-NIEIVDGD-IK 105 Query: 160 SVEGL-----FDVIVSNPPYI 175 SV+ L FDV+ SNPPY+ Sbjct: 106 SVDKLFKRQSFDVVTSNPPYM 126 >gi|218282061|ref|ZP_03488366.1| hypothetical protein EUBIFOR_00937 [Eubacterium biforme DSM 3989] gi|218216979|gb|EEC90517.1| hypothetical protein EUBIFOR_00937 [Eubacterium biforme DSM 3989] Length = 189 Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust. Identities = 41/194 (21%), Positives = 84/194 (43%), Gaps = 27/194 (13%) Query: 70 DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129 + + + +++D L+F L ++++ + L+LGT + + K P + V ++ Sbjct: 5 EQYAKEHQVPIMMDDGLSFLLEKLQENQCLSFLELGTAIARTSIEVAKLDPRMRVVTIER 64 Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFS-SVEGLFDVIVSNPPYIESVIVDCLGLEVR 188 + + + AK N +G+S++ ++ D +V+G+FD I +D + + Sbjct: 65 NSEMIVQAKKNIEESGLSDQITLIEGDALEVNVDGMFDCI----------FIDAAKAQYQ 114 Query: 189 DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS-VEIGYNQKV-DVVRIFESRKLFL 246 F + + +G+ VS ++N GL E+ N+ +VR +L Sbjct: 115 RFFEKYCMHLNENGII--------VSDNMNFHGLVQHPELTQNRNTRQLVRKIHDYHTYL 166 Query: 247 VN------AFKDYG 254 N AF DYG Sbjct: 167 ANLSDYETAFYDYG 180 >gi|307591966|ref|YP_003899557.1| methyltransferase type 11 [Cyanothece sp. PCC 7822] gi|306985611|gb|ADN17491.1| Methyltransferase type 11 [Cyanothece sp. PCC 7822] Length = 208 Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust. Identities = 29/85 (34%), Positives = 48/85 (56%), Gaps = 5/85 (5%) Query: 76 PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135 P + ++V L + ++ DVV DLG+G G + ++ K KGVG+DI K ++ Sbjct: 55 PSSNVVVQEMLRIA--QVTSSDVV--YDLGSGDGRIVISAAKNY-GAKGVGIDIDPKLIQ 109 Query: 136 IAKSNAVTNGVSERFDTLQSDWFSS 160 AK+NA GVS+R ++ D+F + Sbjct: 110 EAKANAREAGVSDRVKFIEQDFFKA 134 >gi|254386203|ref|ZP_05001514.1| rRNA or tRNA methyltransferase [Streptomyces sp. Mg1] gi|194345059|gb|EDX26025.1| rRNA or tRNA methyltransferase [Streptomyces sp. Mg1] Length = 512 Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust. Identities = 42/138 (30%), Positives = 59/138 (42%), Gaps = 16/138 (11%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 V LDLGTG+G L + + D++ +ALE + +G E + L Sbjct: 165 VATALDLGTGSGIQALHAAHHA--TRVTATDVNPRALEFTRLTLALSGAPE-AELLAGSL 221 Query: 158 FSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216 F V + +D+IVSNPP+ VI L R DGG+ G RT+ H Sbjct: 222 FEPVGDATYDLIVSNPPF---VISPGARLTYR--------DGGMSGDDLCRTLVQEAGAH 270 Query: 217 LNKDGLCSVEIGYNQKVD 234 LN G +G Q V+ Sbjct: 271 LNPGGYAQF-LGNWQHVE 287 >gi|269126609|ref|YP_003299979.1| methyltransferase small [Thermomonospora curvata DSM 43183] gi|268311567|gb|ACY97941.1| methyltransferase small [Thermomonospora curvata DSM 43183] Length = 228 Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust. Identities = 37/122 (30%), Positives = 57/122 (46%), Gaps = 26/122 (21%) Query: 62 NVRLTLSSDTFEPR---PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118 ++RLT F P P T +L+++ A P E +LD+G G G + LA+ Sbjct: 44 HLRLTTDRGVFSPDRIDPGTRILLETVPA---PPAEGD----LLDVGCGYGPIALAMALR 96 Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGV-------SERFDTLQSDWFSSVEGLFDVIVSN 171 SP + GVD++ +AL++A+ NA T G+ E+ D F + SN Sbjct: 97 SPRARVYGVDVNERALQLARLNARTAGIGNASFHRPEQIDPAMR---------FAALWSN 147 Query: 172 PP 173 PP Sbjct: 148 PP 149 >gi|225570059|ref|ZP_03779084.1| hypothetical protein CLOHYLEM_06155 [Clostridium hylemonae DSM 15053] gi|225161529|gb|EEG74148.1| hypothetical protein CLOHYLEM_06155 [Clostridium hylemonae DSM 15053] Length = 245 Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust. Identities = 25/79 (31%), Positives = 45/79 (56%), Gaps = 6/79 (7%) Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 LDLGTGTG + + L ++ + G++I ++ ++A+ + + NG+ ++ D + D Sbjct: 50 LDLGTGTGILPILLEAKNEGSRYAGLEIQEESADMARRSILHNGLEDKIDIVTGD-IREA 108 Query: 162 EGL-----FDVIVSNPPYI 175 GL F VI +NPPY+ Sbjct: 109 AGLFGAASFHVITTNPPYM 127 >gi|197301950|ref|ZP_03167014.1| hypothetical protein RUMLAC_00672 [Ruminococcus lactaris ATCC 29176] gi|197299018|gb|EDY33554.1| hypothetical protein RUMLAC_00672 [Ruminococcus lactaris ATCC 29176] Length = 253 Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust. Identities = 26/98 (26%), Positives = 48/98 (48%), Gaps = 6/98 (6%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 VD+ L ++ + + V LD+GTG G + + L ++ G++I E+A+ + Sbjct: 39 VDAVLLSDFAKVRQGETV--LDMGTGNGIIPVLLAGKTEGKHFTGLEIQADTAEMAQRSV 96 Query: 142 VTNGVSERFDTLQSDWFSSV----EGLFDVIVSNPPYI 175 N + +R + + D + FDVI +NPPY+ Sbjct: 97 RYNHLEDRVEIVTGDIKEAATIFKPAFFDVITTNPPYM 134 >gi|193216593|ref|YP_001999835.1| predicted O-methyltransferase [Mycoplasma arthritidis 158L3-1] gi|193001916|gb|ACF07131.1| predicted O-methyltransferase [Mycoplasma arthritidis 158L3-1] Length = 263 Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust. Identities = 24/90 (26%), Positives = 44/90 (48%), Gaps = 11/90 (12%) Query: 96 RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155 R+V IL++GT GA+ + + +P V+I A+EIA N NG+ ++ ++ Sbjct: 42 RNVSNILEVGTNNGALAIFVASRNPKITIDAVEIQHDAIEIANENVKMNGLDKQIRVIEG 101 Query: 156 DWF-----------SSVEGLFDVIVSNPPY 174 D+ + + + I++NPPY Sbjct: 102 DFKKYAKDYAYRCGNQMAKKYSSIIANPPY 131 >gi|16077174|ref|NP_387987.1| ribosomal RNA methyltransferase [Bacillus subtilis subsp. subtilis str. 168] gi|221307918|ref|ZP_03589765.1| hypothetical protein Bsubs1_00550 [Bacillus subtilis subsp. subtilis str. 168] gi|221312239|ref|ZP_03594044.1| hypothetical protein BsubsN3_00545 [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221317173|ref|ZP_03598467.1| hypothetical protein BsubsJ_00550 [Bacillus subtilis subsp. subtilis str. JH642] gi|221321436|ref|ZP_03602730.1| hypothetical protein BsubsS_00550 [Bacillus subtilis subsp. subtilis str. SMY] gi|586914|sp|P37872|YBXB_BACSU RecName: Full=Uncharacterized protein ybxB; AltName: Full=ORF23; AltName: Full=P23 gi|402362|gb|AAB00971.1| hypothetical protein [Bacillus subtilis subsp. subtilis str. 168] gi|2632373|emb|CAB11882.1| ribosomal RNA methyltransferase [Bacillus subtilis subsp. subtilis str. 168] Length = 201 Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust. Identities = 33/98 (33%), Positives = 53/98 (54%), Gaps = 10/98 (10%) Query: 78 TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137 + LL+DS F P +E ILD+G G G + L+L + +D++ +A+E++ Sbjct: 46 SRLLIDS---FEEPEVEGG----ILDVGCGYGPIGLSLASDFKDRTIHMIDVNERAVELS 98 Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPP 173 NA NG++ QSD FS+V+ F I++NPP Sbjct: 99 NENAEQNGIT-NVKIYQSDLFSNVDSAQTFASILTNPP 135 >gi|313625354|gb|EFR95147.1| methyltransferase [Listeria innocua FSL J1-023] Length = 201 Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust. Identities = 25/74 (33%), Positives = 40/74 (54%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 +ILD+G G G + L + K P + VD++ +ALE+AK NA N ++ S + + Sbjct: 62 KILDVGCGYGPMGLTVAKAFPDSQIEMVDVNLRALELAKENAEINKITNTHIYESSVYDN 121 Query: 160 SVEGLFDVIVSNPP 173 + I+SNPP Sbjct: 122 VTANDYQAIISNPP 135 >gi|302656356|ref|XP_003019932.1| hypothetical protein TRV_06034 [Trichophyton verrucosum HKI 0517] gi|291183708|gb|EFE39308.1| hypothetical protein TRV_06034 [Trichophyton verrucosum HKI 0517] Length = 371 Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust. Identities = 48/162 (29%), Positives = 71/162 (43%), Gaps = 35/162 (21%) Query: 49 ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVD--SALAFSLPRIEKRDVVRILDLGT 106 + + ILG + F ++ + PRP+TE + + R+ +RI+D+ T Sbjct: 70 KPLQYILGDQPFGDLTILCREGVLIPRPDTESYTTRIAQRLLTENRLNPTRSIRIIDICT 129 Query: 107 GTGAVCL---ALLKES-PFFKGVGVDISCKALEIAKSN---AVTNG--VSERFDT----- 152 GTG + L +LL S P +GVDIS AL +AK N + NG +S D Sbjct: 130 GTGCIPLLLHSLLAPSIPTISIIGVDISATALSLAKKNLEYNIGNGTLLSRARDEIHFVH 189 Query: 153 --------LQSDWFSSVEGL-----------FDVIVSNPPYI 175 L+SD E L D+++SNPPYI Sbjct: 190 ADILDPCYLESDGSELGEMLSRSNQGGHSKGLDLLISNPPYI 231 >gi|296328879|ref|ZP_06871390.1| ribosomal RNA small subunit methyltransferase C [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|296154000|gb|EFG94807.1| ribosomal RNA small subunit methyltransferase C [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 223 Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust. Identities = 30/99 (30%), Positives = 55/99 (55%), Gaps = 8/99 (8%) Query: 83 DSALAFSL--PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG-VGVDISCKALEIAKS 139 D+ L F L + K+++ ++LD+GTG G + + LL ++ F +G+DI + +E A Sbjct: 29 DTILLFKLFQASLNKKNI-KLLDIGTGNGILPI-LLSDNEFLSELIGIDIQKENIERANK 86 Query: 140 NAVTNGVSE--RFDTLQSDWFSSVEGLFDVIVSNPPYIE 176 N + + +F+ + + FDVI+SNPPY++ Sbjct: 87 ALKLNRIEKNIQFECMDVKEYKK-SNYFDVIISNPPYMD 124 >gi|19704242|ref|NP_603804.1| ribosomal RNA small subunit methyltransferase C [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|19714472|gb|AAL95103.1| Ribosomal RNA small subunit methyltransferase C [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] Length = 223 Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust. Identities = 30/99 (30%), Positives = 55/99 (55%), Gaps = 8/99 (8%) Query: 83 DSALAFSL--PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG-VGVDISCKALEIAKS 139 D+ L F L + K+++ ++LD+GTG G + + LL ++ F +G+DI + +E A Sbjct: 29 DTILLFKLFQASLNKKNI-KLLDIGTGNGILPI-LLSDNEFLSELIGIDIQKENIERANK 86 Query: 140 NAVTNGVSE--RFDTLQSDWFSSVEGLFDVIVSNPPYIE 176 N + + +F+ + + FDVI+SNPPY++ Sbjct: 87 ALKLNRIEKNIQFECMDVKEYKK-SNYFDVIISNPPYMD 124 >gi|16799361|ref|NP_469629.1| hypothetical protein lin0284 [Listeria innocua Clip11262] gi|16412713|emb|CAC95517.1| lin0284 [Listeria innocua Clip11262] Length = 201 Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust. Identities = 25/74 (33%), Positives = 40/74 (54%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 +ILD+G G G + L + K P + VD++ +ALE+AK NA N ++ S + + Sbjct: 62 KILDVGCGYGPMGLTVAKAFPDSQIEMVDVNLRALELAKENAEINKITNTHIYESSVYDN 121 Query: 160 SVEGLFDVIVSNPP 173 + I+SNPP Sbjct: 122 VTANDYQAIISNPP 135 >gi|296330132|ref|ZP_06872614.1| putative RNA methyltransferase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305673376|ref|YP_003865048.1| putative RNA methyltransferase [Bacillus subtilis subsp. spizizenii str. W23] gi|296152721|gb|EFG93588.1| putative RNA methyltransferase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305411620|gb|ADM36739.1| putative RNA methyltransferase [Bacillus subtilis subsp. spizizenii str. W23] Length = 459 Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust. Identities = 45/166 (27%), Positives = 80/166 (48%), Gaps = 29/166 (17%) Query: 29 VLDDRQRFFLTNAIVRSLKHESIHRILG------WRDFY------NVRLTLSSDTF-EPR 75 + D +F +IV+++ + I G W + Y +V+ +S+ +F + Sbjct: 233 IEDITAQFPHVKSIVQNINPNKTNVIFGNDTNVIWGEEYIYDLIGDVKFAISARSFYQVN 292 Query: 76 PE-TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134 PE T++L D AL ++ E + ++D G G + L L K++ K GV+I +A+ Sbjct: 293 PEQTKVLYDKALEYA----ELKGEETVIDAYCGIGTISLFLAKQAK--KVYGVEIVPEAI 346 Query: 135 EIAKSNAVTNGVSE------RFDTLQSDWFSSVEGL-FDVIVSNPP 173 E AK NA NG++ +T+ W+ EG+ D +V +PP Sbjct: 347 EDAKRNAELNGITNAEFAVGEAETVIPKWYE--EGITADTLVVDPP 390 >gi|238855365|ref|ZP_04645677.1| methyltransferase small domain protein [Lactobacillus jensenii 269-3] gi|282934595|ref|ZP_06339842.1| 16S RNA G1207 methylase RsmC [Lactobacillus jensenii 208-1] gi|238832026|gb|EEQ24351.1| methyltransferase small domain protein [Lactobacillus jensenii 269-3] gi|281301347|gb|EFA93644.1| 16S RNA G1207 methylase RsmC [Lactobacillus jensenii 208-1] Length = 199 Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust. Identities = 24/73 (32%), Positives = 44/73 (60%), Gaps = 1/73 (1%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 ILD+G G G + L K+ P + VD++ +A+++A+ NA NGV+ + S + + Sbjct: 63 ILDVGCGYGPIGLFAAKKWPERQVDMVDVNERAMDLARKNAEVNGVTNA-NIFASSVYEN 121 Query: 161 VEGLFDVIVSNPP 173 V+ + +I++NPP Sbjct: 122 VDKQYAMILTNPP 134 >gi|84496250|ref|ZP_00995104.1| hypothetical protein JNB_01985 [Janibacter sp. HTCC2649] gi|84383018|gb|EAP98899.1| hypothetical protein JNB_01985 [Janibacter sp. HTCC2649] Length = 370 Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust. Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 1/82 (1%) Query: 94 EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153 E R R +DL G+G V AL P + D S A+ ++ A NGVS+R + + Sbjct: 222 EMRQAERAIDLACGSGVVAAALALARPELHVLATDQSAAAIASTRATAAANGVSDRVEVV 281 Query: 154 QSDWFSSVE-GLFDVIVSNPPY 174 ++D +V +IV NPP+ Sbjct: 282 RADGLETVATASAQLIVLNPPF 303 >gi|332670095|ref|YP_004453103.1| methyltransferase small [Cellulomonas fimi ATCC 484] gi|332339133|gb|AEE45716.1| methyltransferase small [Cellulomonas fimi ATCC 484] Length = 203 Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust. Identities = 28/73 (38%), Positives = 39/73 (53%), Gaps = 2/73 (2%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LDLG G G V L+L ESP + VD++ +AL++ + NA G++ L D Sbjct: 64 LLDLGCGWGPVALSLALESPDARVWAVDVNERALDLVRRNAAALGLANVVAALPDDVPDD 123 Query: 161 VEGLFDVIVSNPP 173 V F I SNPP Sbjct: 124 VR--FATIRSNPP 134 >gi|297156628|gb|ADI06340.1| hypothetical protein SBI_03219 [Streptomyces bingchenggensis BCW-1] Length = 499 Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust. Identities = 24/53 (45%), Positives = 32/53 (60%) Query: 97 DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 D R+LDLG G G + ALLKE+ F + VGVD+S +AL A + + ER Sbjct: 297 DAARVLDLGCGQGQLVGALLKEARFTEIVGVDVSMRALNEAARRLRLDRMGER 349 >gi|326793495|ref|YP_004311315.1| ribosomal RNA small subunit methyltransferase C [Marinomonas mediterranea MMB-1] gi|326544259|gb|ADZ89479.1| Ribosomal RNA small subunit methyltransferase C [Marinomonas mediterranea MMB-1] Length = 353 Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust. Identities = 31/109 (28%), Positives = 50/109 (45%), Gaps = 13/109 (11%) Query: 82 VDSALAFSLPRIEKR------DVVRILDLGTGTGAVCLALLKESPFFKGVGV---DISCK 132 +D A L ++EK + RILD G G G + + L K + G V D S Sbjct: 188 LDKGTALLLEQLEKHRFMSGVNQARILDFGCGDGVISMWLHKRT----GANVTSLDDSAL 243 Query: 133 ALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181 AL+ + N ++ T+ S+ V+G F+ +V+NPP+ + D Sbjct: 244 ALKATELTFAENDATDSLTTIASNGLKHVKGRFNYVVTNPPFHTGINTD 292 >gi|254429347|ref|ZP_05043054.1| Methyltransferase small domain family [Alcanivorax sp. DG881] gi|196195516|gb|EDX90475.1| Methyltransferase small domain family [Alcanivorax sp. DG881] Length = 388 Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust. Identities = 28/81 (34%), Positives = 40/81 (49%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+LDLG G G + LA L+ SP + D S ALE A+ N + + D Sbjct: 246 RVLDLGCGNGVIGLAALQASPGAEMTFCDESWLALESARDNVSRYFPNRQCHFHHGDGLV 305 Query: 160 SVEGLFDVIVSNPPYIESVIV 180 +E FD I+ NPP+ + +V Sbjct: 306 GLEREFDCILLNPPFHDGHVV 326 >gi|311067148|ref|YP_003972071.1| putative RNA methyltransferase [Bacillus atrophaeus 1942] gi|310867665|gb|ADP31140.1| putative RNA methyltransferase [Bacillus atrophaeus 1942] Length = 460 Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust. Identities = 45/166 (27%), Positives = 80/166 (48%), Gaps = 29/166 (17%) Query: 29 VLDDRQRFFLTNAIVRSLKHESIHRILG------WRDFY------NVRLTLSSDTF-EPR 75 + D +F +IV+++ + I G W + Y +V+ +S+ +F + Sbjct: 233 IEDITAQFPHVKSIVQNINPNKTNVIFGNETNVIWGEEYIYDLIGDVKFAISARSFYQVN 292 Query: 76 PE-TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134 PE T++L D AL ++ E + ++D G G + L L K++ K GV+I +A+ Sbjct: 293 PEQTKVLYDKALEYA----ELKGEETVIDAYCGIGTISLFLAKQAK--KVYGVEIVPEAI 346 Query: 135 EIAKSNAVTNGVSE------RFDTLQSDWFSSVEGL-FDVIVSNPP 173 E AK NA NG++ +T+ W+ EG+ D +V +PP Sbjct: 347 EDAKRNAELNGITNAEFAVGEAETVIPKWYE--EGITADTLVVDPP 390 >gi|295097892|emb|CBK86982.1| Predicted O-methyltransferase [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 245 Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust. Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 4/81 (4%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 V RILD+GTG+G L L + + + V++ +A A NA + ++R +D Sbjct: 45 VKRILDIGTGSGLQALMLAQRTEEHVTIDAVELDPQAARQASENAADSPWADRIRVECAD 104 Query: 157 ---WFSSVEGLFDVIVSNPPY 174 W S +D+IVSNPPY Sbjct: 105 VLTWASEQTARYDLIVSNPPY 125 >gi|262831243|sp|C4LCN4|TRMN6_TOLAT RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName: Full=tRNA m6A37 methyltransferase Length = 237 Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust. Identities = 26/80 (32%), Positives = 43/80 (53%), Gaps = 1/80 (1%) Query: 96 RDVVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQ 154 R RILD+GTGTG + L L + + + V++ A++ A+ N + ER ++ Sbjct: 36 RGAKRILDIGTGTGILALMLAQRTAQQVQIDAVELDKDAVKQAEENINASPWRERIRVIR 95 Query: 155 SDWFSSVEGLFDVIVSNPPY 174 D + +D+I+SNPPY Sbjct: 96 HDIRTFQAPHYDLIISNPPY 115 >gi|237807744|ref|YP_002892184.1| methyltransferase small [Tolumonas auensis DSM 9187] gi|237500005|gb|ACQ92598.1| methyltransferase small [Tolumonas auensis DSM 9187] Length = 265 Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust. Identities = 26/80 (32%), Positives = 43/80 (53%), Gaps = 1/80 (1%) Query: 96 RDVVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQ 154 R RILD+GTGTG + L L + + + V++ A++ A+ N + ER ++ Sbjct: 64 RGAKRILDIGTGTGILALMLAQRTAQQVQIDAVELDKDAVKQAEENINASPWRERIRVIR 123 Query: 155 SDWFSSVEGLFDVIVSNPPY 174 D + +D+I+SNPPY Sbjct: 124 HDIRTFQAPHYDLIISNPPY 143 >gi|205372078|ref|ZP_03224895.1| 16S rRNA m(2)G 1207 methyltransferase [Bacillus coahuilensis m4-4] Length = 200 Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust. Identities = 32/87 (36%), Positives = 47/87 (54%), Gaps = 6/87 (6%) Query: 88 FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147 F LP ++ LD+G G G + L+L KE + VD++ +AL +A+ NAV N V Sbjct: 53 FKLPAVDGP----FLDVGCGYGPIGLSLAKEDENRQVHMVDVNERALSLAEENAVLNNV- 107 Query: 148 ERFDTLQSDWFSSV-EGLFDVIVSNPP 173 + +SD SV E F I++NPP Sbjct: 108 QNVSIYRSDTLHSVKEESFAAILTNPP 134 >gi|108798335|ref|YP_638532.1| methyltransferase small [Mycobacterium sp. MCS] gi|119867432|ref|YP_937384.1| methyltransferase small [Mycobacterium sp. KMS] gi|108768754|gb|ABG07476.1| methyltransferase small [Mycobacterium sp. MCS] gi|119693521|gb|ABL90594.1| methyltransferase small [Mycobacterium sp. KMS] Length = 507 Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust. Identities = 50/139 (35%), Positives = 68/139 (48%), Gaps = 16/139 (11%) Query: 89 SLPRIEKRDVV-RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147 SL R R+ V R LDLGTG G L L S ++ V D + +AL +A + A NG+S Sbjct: 156 SLARAVVREPVGRALDLGTGCGIQALHLDAHS--YQIVATDTNERALALAAATARLNGMS 213 Query: 148 ERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206 +D F V G FD+IVSNPP++ +G RD+ I D G+ G + Sbjct: 214 --WDLRCGSLFEPVAGERFDLIVSNPPFV-------VGAGARDY---IYRDSGMVGDALC 261 Query: 207 RTIADGVSRHLNKDGLCSV 225 R + + V HL G V Sbjct: 262 RNLIEQVGDHLEPGGTAHV 280 >gi|1246430|emb|CAA48793.1| orfB [Clostridium acetobutylicum] Length = 298 Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust. Identities = 46/192 (23%), Positives = 84/192 (43%), Gaps = 30/192 (15%) Query: 57 WRDFYN-----VRLTLSS--DTFEPRP-ETELLVDSALAF-------------SLPRIEK 95 W+ +Y R+ + + + P+ E L +D +AF +L R Sbjct: 116 WKKYYKPTKIGARIVVKPLWEEYTPKDYELMLNMDPGMAFGTGTHETTRMCIQALERYVN 175 Query: 96 RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155 D + D+GTG+G + +A K + K +GVD+ A++ AK N N V+ + L Sbjct: 176 EDA-EVFDIGTGSGILAIAAAKLNA-KKVLGVDLDSVAVKAAKENIQYNNVN-NIEILHG 232 Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215 + V+G D+IV+N +I D + + + D + + DG + A+ V Sbjct: 233 NLMEVVQGKADIIVAN------IIADVINILIPDINKFLKTDGYFISSGIIKDRAEDVIE 286 Query: 216 HLNKDGLCSVEI 227 +L K+ +E+ Sbjct: 287 NLKKNKFEIIEV 298 >gi|291547630|emb|CBL20738.1| Predicted O-methyltransferase [Ruminococcus sp. SR1/5] Length = 246 Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust. Identities = 27/98 (27%), Positives = 49/98 (50%), Gaps = 6/98 (6%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 +D+ L R+++ +V LD+GTGTG + + L + G++I + E+A + Sbjct: 32 MDAVLLSGFARVKRGEVA--LDMGTGTGIIPILLSDRTDGEHFTGLEIQHECAEMADRSV 89 Query: 142 VTNGVSERFDTLQSDWFSSV----EGLFDVIVSNPPYI 175 NG+ +R ++ D + FDV+ NPPY+ Sbjct: 90 RYNGLEDRVRIVEGDIREAAGIFGAASFDVVTCNPPYM 127 >gi|160936945|ref|ZP_02084309.1| hypothetical protein CLOBOL_01834 [Clostridium bolteae ATCC BAA-613] gi|158440135|gb|EDP17882.1| hypothetical protein CLOBOL_01834 [Clostridium bolteae ATCC BAA-613] Length = 260 Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust. Identities = 22/80 (27%), Positives = 43/80 (53%), Gaps = 4/80 (5%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LDLGTGTG + + L ++ G++I ++ ++A+ + N + + D + D Sbjct: 63 KVLDLGTGTGIIPILLTAKTEGSHFTGLEIQEESADMARRSVAYNHLEGKVDIVTGDIVE 122 Query: 160 SVE----GLFDVIVSNPPYI 175 + FDV+ +NPPY+ Sbjct: 123 ASRLFALASFDVVTTNPPYM 142 >gi|262191214|ref|ZP_06049413.1| predicted O-methyltransferase [Vibrio cholerae CT 5369-93] gi|262032916|gb|EEY51455.1| predicted O-methyltransferase [Vibrio cholerae CT 5369-93] Length = 240 Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust. Identities = 26/80 (32%), Positives = 37/80 (46%), Gaps = 5/80 (6%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD---W 157 ILD+G GTG + L + P +DI A + A+ N + +ER + +D W Sbjct: 46 ILDIGCGTGLLSLMCAQRFPHAHITALDIEQSAYQAAEHNRQQSPWAERIECQHADILHW 105 Query: 158 FSSVEGLFDVIVSNPPYIES 177 S F I+ NPPY S Sbjct: 106 LPSKR--FAAIICNPPYFNS 123 >gi|38233996|ref|NP_939763.1| putative transferase [Corynebacterium diphtheriae NCTC 13129] gi|38200258|emb|CAE49942.1| Putative transferase [Corynebacterium diphtheriae] Length = 511 Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust. Identities = 38/135 (28%), Positives = 59/135 (43%), Gaps = 15/135 (11%) Query: 90 LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 L + V +LDLGTG+G L L+ + D+ +AL+ A+ A G Sbjct: 152 LATTPRSPVNSVLDLGTGSGVQALGQLRHARSV--TATDVHPRALDFAE--ATFAGAHFD 207 Query: 150 FDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208 + L WF ++ FD IV+NPP+ +V +E D + LDG + T Sbjct: 208 VEILDGSWFEPIKNRKFDRIVANPPF----VVGPPEIEHVYRDSGLDLDGATE------T 257 Query: 209 IADGVSRHLNKDGLC 223 + G HL+ +G Sbjct: 258 VVRGAVDHLHSNGTA 272 >gi|332559213|ref|ZP_08413535.1| methyltransferase small [Rhodobacter sphaeroides WS8N] gi|332276925|gb|EGJ22240.1| methyltransferase small [Rhodobacter sphaeroides WS8N] Length = 253 Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust. Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 5/80 (6%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +L+LG G G L L P + G+++ +A+ NA NGV+ + ++ D + Sbjct: 47 VLELGCGAGVASLCLAARVPGLRLAGLELQPAYAALARENAAMNGVA--LEVVEGDLSAM 104 Query: 161 VEGL---FDVIVSNPPYIES 177 L FD +++NPPY + Sbjct: 105 PAALRQSFDHVIANPPYYPA 124 >gi|328543734|ref|YP_004303843.1| methyltransferase small [polymorphum gilvum SL003B-26A1] gi|326413478|gb|ADZ70541.1| Methyltransferase small [Polymorphum gilvum SL003B-26A1] Length = 365 Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust. Identities = 42/134 (31%), Positives = 60/134 (44%), Gaps = 15/134 (11%) Query: 92 RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151 R+ + R LDL G G L L + V V+I+ A +A+ NA NG+ ER Sbjct: 131 RLSAKPGDRALDLCAGPGIQALRLAAMG--AEVVAVEINPVAASLAQLNAAANGLGERIS 188 Query: 152 TLQSDWFSSVEGL--FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD-GGIDGLSHYRT 208 + +V FD++ +NPP L V D P + GG DGLS R Sbjct: 189 VRIGSLYQAVGARERFDLVSANPPL----------LPVPDNVPYPFVGHGGPDGLSITRR 238 Query: 209 IADGVSRHLNKDGL 222 I DG+ L++ G+ Sbjct: 239 ILDGLPGVLSERGV 252 >gi|110003975|emb|CAK98315.1| hsdm protein typeIrestriction enzyme [Spiroplasma citri] Length = 509 Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust. Identities = 31/109 (28%), Positives = 54/109 (49%), Gaps = 14/109 (12%) Query: 72 FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131 + P+P ++LL L K ++ + D G+G++ L + KE G ++ Sbjct: 198 YTPQPVSKLLA------KLVSQGKTEIKTVYDPTCGSGSLLLRVYKELKIGHLYGQELKT 251 Query: 132 KALEIAKSNAVTNGVS-ERF-----DTLQSDWFSSVEGLFDVIVSNPPY 174 + IA+ N + +G+ +F DTL+ D F E F++IV+NPPY Sbjct: 252 NSYNIARMNMMLHGLKYNKFNIYNGDTLEDDGFKGQE--FEIIVANPPY 298 >gi|15894566|ref|NP_347915.1| ribosomal protein L11 methyltransferase [Clostridium acetobutylicum ATCC 824] gi|18314338|sp|P45558|PRMA_CLOAB RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11 Mtase gi|15024213|gb|AAK79255.1|AE007641_1 SAM-dependent methyltransferase [Clostridium acetobutylicum ATCC 824] gi|325508698|gb|ADZ20334.1| ribosomal protein L11 methyltransferase [Clostridium acetobutylicum EA 2018] Length = 311 Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust. Identities = 46/192 (23%), Positives = 84/192 (43%), Gaps = 30/192 (15%) Query: 57 WRDFYN-----VRLTLSS--DTFEPRP-ETELLVDSALAF-------------SLPRIEK 95 W+ +Y R+ + + + P+ E L +D +AF +L R Sbjct: 116 WKKYYKPTKIGARIVVKPLWEEYTPKDYELMLNMDPGMAFGTGTHETTRMCIQALERYVN 175 Query: 96 RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155 D + D+GTG+G + +A K + K +GVD+ A++ AK N N V+ + L Sbjct: 176 EDA-EVFDIGTGSGILAIAAAKLNA-KKVLGVDLDSVAVKAAKENIQYNNVN-NIEILHG 232 Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215 + V+G D+IV+N +I D + + + D + + DG + A+ V Sbjct: 233 NLMEVVQGKADIIVAN------IIADVINILIPDINKFLKTDGYFISSGIIKDRAEDVIE 286 Query: 216 HLNKDGLCSVEI 227 +L K+ +E+ Sbjct: 287 NLKKNKFEIIEV 298 >gi|84684942|ref|ZP_01012842.1| hypothetical protein 1099457000245_RB2654_03499 [Maritimibacter alkaliphilus HTCC2654] gi|84667277|gb|EAQ13747.1| hypothetical protein RB2654_03499 [Rhodobacterales bacterium HTCC2654] Length = 402 Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust. Identities = 28/81 (34%), Positives = 41/81 (50%), Gaps = 7/81 (8%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 R+LD+ + G LA L + VD S AL++A A GV++RFDT Q D F Sbjct: 228 ARVLDVFSHVGGFSLAALANG-ATTALAVDGSQPALDLATQGAEATGVADRFDTRQGDAF 286 Query: 159 SSVEGL------FDVIVSNPP 173 + L FD+++ +PP Sbjct: 287 DVLTSLGEAGEVFDMVICDPP 307 >gi|325286600|ref|YP_004262390.1| tRNA (adenine-N(6)-)-methyltransferase [Cellulophaga lytica DSM 7489] gi|324322054|gb|ADY29519.1| tRNA (adenine-N(6)-)-methyltransferase [Cellulophaga lytica DSM 7489] Length = 245 Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust. Identities = 36/155 (23%), Positives = 71/155 (45%), Gaps = 19/155 (12%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER-------FDTL 153 ILD+G GTG + L L + S +++ A E +N + ++R FD Sbjct: 41 ILDIGAGTGIIALMLAQRSAADNIEAIELDADAYEQCTNNFEASDWADRLFCFHAGFDEF 100 Query: 154 QSDWF---SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210 ++ + + L+D+IVSNPP+ + G + RD + + + + Sbjct: 101 VDEYATDETEEDELYDLIVSNPPFYAEEVTS--GNKARD-------NARQNTSLPFSELV 151 Query: 211 DGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245 GV++ L +G + I Y ++ + +++ E+ KL+ Sbjct: 152 SGVAKLLTTNGRFATIIPYKEEEEFIKLAENFKLY 186 >gi|296127792|ref|YP_003635044.1| N-6 DNA methylase [Brachyspira murdochii DSM 12563] gi|296019608|gb|ADG72845.1| N-6 DNA methylase [Brachyspira murdochii DSM 12563] Length = 405 Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust. Identities = 33/107 (30%), Positives = 55/107 (51%), Gaps = 11/107 (10%) Query: 72 FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK--ESPFFKGVGVDI 129 F P+ ELL+ ++ S +K+D V+ILD G+G L+ + +P G +D Sbjct: 28 FTPKSIRELLLKKLISIS----DKKDNVKILDPACGSGEFILSFKEYFNNPHLYGFEIDE 83 Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE 176 S + I+K + N + DTL+ D S++ +D ++ NPPY E Sbjct: 84 SL--VSISKK-LINNADIKCIDTLKIDIEKSIK--YDYVIGNPPYFE 125 >gi|315275374|ref|ZP_07869513.1| methyltransferase [Listeria marthii FSL S4-120] gi|313615699|gb|EFR88991.1| methyltransferase [Listeria marthii FSL S4-120] Length = 201 Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust. Identities = 25/74 (33%), Positives = 40/74 (54%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 +ILD+G G G + L + K P + VD++ +ALE+AK NA N ++ S + + Sbjct: 62 KILDVGCGYGPMGLTVAKALPDSQIEMVDVNLRALELAKENAEINKITNTHIYESSVYDN 121 Query: 160 SVEGLFDVIVSNPP 173 + I+SNPP Sbjct: 122 VTANDYQAIISNPP 135 >gi|256544625|ref|ZP_05471997.1| methylase [Anaerococcus vaginalis ATCC 51170] gi|256399514|gb|EEU13119.1| methylase [Anaerococcus vaginalis ATCC 51170] Length = 376 Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust. Identities = 23/53 (43%), Positives = 34/53 (64%), Gaps = 1/53 (1%) Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS-SVEGLFDVIVSNPPYIE 176 +G DIS KA+E+AK+NA+ GV E L D+ +++ F + +SNPPY E Sbjct: 254 LGSDISKKAIELAKNNALNAGVYEDITFLNKDFKDINLKNNFGIFISNPPYGE 306 >gi|170289516|ref|YP_001739754.1| ribosomal L11 methyltransferase [Thermotoga sp. RQ2] gi|226710126|sp|B1L841|PRMA_THESQ RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11 Mtase gi|170177019|gb|ACB10071.1| ribosomal L11 methyltransferase [Thermotoga sp. RQ2] Length = 264 Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust. Identities = 30/73 (41%), Positives = 43/73 (58%), Gaps = 7/73 (9%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL--QSDWF 158 +LD+G GTG + +A K+ + V VD+ +A+E+A+ N N V D L SD Sbjct: 133 VLDVGCGTGILAIAA-KKLGASQVVAVDVDEQAVEVAEENVRKNDV----DVLVKWSDLL 187 Query: 159 SSVEGLFDVIVSN 171 S VEG FD++VSN Sbjct: 188 SDVEGTFDIVVSN 200 >gi|110004783|emb|CAK99117.1| probable adenine-specific dna-methyltransferase hsdm subunit transmembrane protein [Spiroplasma citri] Length = 517 Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust. Identities = 31/109 (28%), Positives = 54/109 (49%), Gaps = 14/109 (12%) Query: 72 FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131 + P+P ++LL L K ++ + D G+G++ L + KE G ++ Sbjct: 206 YTPQPVSKLLA------KLVSQGKTEIKTVYDPTCGSGSLLLRVYKELKIGHLYGQELKT 259 Query: 132 KALEIAKSNAVTNGVS-ERF-----DTLQSDWFSSVEGLFDVIVSNPPY 174 + IA+ N + +G+ +F DTL+ D F E F++IV+NPPY Sbjct: 260 NSYNIARMNMMLHGLKYNKFNIYNGDTLEDDGFKGQE--FEIIVANPPY 306 >gi|77464322|ref|YP_353826.1| N-6 adenine-specific DNA methylase [Rhodobacter sphaeroides 2.4.1] gi|77388740|gb|ABA79925.1| N-6 Adenine-specific DNA methylase [Rhodobacter sphaeroides 2.4.1] Length = 253 Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust. Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 5/80 (6%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +L+LG G G L L P + G+++ +A+ NA NGV+ + ++ D + Sbjct: 47 VLELGCGAGVASLCLAARVPGLRLAGLELQPAYAALARENAAMNGVA--LEVVEGDLSAM 104 Query: 161 VEGL---FDVIVSNPPYIES 177 L FD +++NPPY + Sbjct: 105 PAALRQSFDHVIANPPYYPA 124 >gi|169351613|ref|ZP_02868551.1| hypothetical protein CLOSPI_02393 [Clostridium spiroforme DSM 1552] gi|169291835|gb|EDS73968.1| hypothetical protein CLOSPI_02393 [Clostridium spiroforme DSM 1552] Length = 249 Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust. Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 7/83 (8%) Query: 96 RDVVRILDLGTGTGAVCLALLKES--PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153 +DV +I+D GT A+ L L + + P +GV+I +A+E+AK N N + + + Sbjct: 46 KDVKKIVDFGTNNAAIPLILSRRTNKPI---IGVEIQKEAVELAKKNITLNSLDNQIKIV 102 Query: 154 QSDWFSSVEGLFDV--IVSNPPY 174 SD V V +V NPP+ Sbjct: 103 HSDIKEFVNDSIKVGLVVCNPPF 125 >gi|163787262|ref|ZP_02181709.1| putative RNA methyltransferase [Flavobacteriales bacterium ALC-1] gi|159877150|gb|EDP71207.1| putative RNA methyltransferase [Flavobacteriales bacterium ALC-1] Length = 237 Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust. Identities = 39/148 (26%), Positives = 65/148 (43%), Gaps = 14/148 (9%) Query: 95 KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154 K + ILDLG GTG + L L + S ++I A E N + ++R Sbjct: 35 KENPFSILDLGAGTGILSLMLAQRSSAQNIEAIEIDADAYEQCSENFENSPWADRLFCYH 94 Query: 155 S---DWFSSVEGLFDVIVSNPP-YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210 + ++ VE FD+I+ NPP Y E D ++ F+ + + I Y T+ Sbjct: 95 ASLLEFVKEVEDKFDLIICNPPFYSEDYKTDNKARDLARFNDAMPFEHLI-----YATL- 148 Query: 211 DGVSRHLNKDGLCSVEIGYNQKVDVVRI 238 L+ DG+ SV I Y ++ ++ + Sbjct: 149 ----NLLSDDGIFSVVIPYKEEEKLIEL 172 >gi|111023624|ref|YP_706596.1| anthranilate synthase component II and I/ aminodeoxychorismate synthase [Rhodococcus jostii RHA1] gi|110823154|gb|ABG98438.1| anthranilate synthase component II and I/ aminodeoxychorismate synthase [Rhodococcus jostii RHA1] Length = 960 Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust. Identities = 50/182 (27%), Positives = 75/182 (41%), Gaps = 20/182 (10%) Query: 74 PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133 PR TEL++ ALA I ++DL TG+GA+ LA+ VD A Sbjct: 729 PRANTELVLAEALA----DISHVTTPVVVDLCTGSGAIALAIAHARADAGVHAVDADPTA 784 Query: 134 LEIAKSN-------AVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYI---ESVIVDCL 183 L +A+ N + V + S ++G D++++ PP I E + C Sbjct: 785 LNVARRNIERQIRLGESPIVLHETAVTTPNLLSGLDGTADLVLARPPCIPDDEDLPSQC- 843 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 G R +L G DGL R +R L+ G VE ++ V+ + E K Sbjct: 844 GEYCRR-----ALVSGTDGLKLARQTIVAAARLLHAGGSLVVEHRPDRYTTVLALLEGNK 898 Query: 244 LF 245 LF Sbjct: 899 LF 900 >gi|41615032|ref|NP_963530.1| hypothetical protein NEQ238 [Nanoarchaeum equitans Kin4-M] gi|40068756|gb|AAR39091.1| NEQ238 [Nanoarchaeum equitans Kin4-M] Length = 175 Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust. Identities = 34/106 (32%), Positives = 52/106 (49%), Gaps = 21/106 (19%) Query: 72 FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131 +EP +T LL+ A F+ +I L++G G+G + LLK+ F GV+I Sbjct: 4 YEPAEDTFLLLKWAKKFAKGKI--------LEIGVGSGYILENLLKKG--FDAYGVEIDK 53 Query: 132 KALEIAKSNAVTNGVSERFD--TLQSDWFSSVEGLFDVIVSNPPYI 175 L+ K E+F SD FS+V +D+I+ NPPY+ Sbjct: 54 DVLKYLK---------EKFKDRVWYSDLFSNVNDKYDLIIFNPPYL 90 >gi|312865348|ref|ZP_07725576.1| type I restriction-modification system, M subunit [Streptococcus downei F0415] gi|311099459|gb|EFQ57675.1| type I restriction-modification system, M subunit [Streptococcus downei F0415] Length = 533 Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust. Identities = 54/237 (22%), Positives = 94/237 (39%), Gaps = 52/237 (21%) Query: 72 FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV---GVD 128 + P+P +L+ AL + R E + + D G+G++ L K S V G + Sbjct: 199 YTPQPVAKLMTQIAL---MGR-EDKQGFSLYDPTMGSGSLLLNAKKYSHKPNTVAYFGQE 254 Query: 129 ISCKALEIAKSNAVTNGVS------ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182 ++ +A+ N + +GV DTL DW + FD ++ NPPY D Sbjct: 255 LNTSTFNLARMNMILHGVPIENQKLHNADTLDEDWPTQEPTNFDAVLMNPPYSAKWSADA 314 Query: 183 LGLEVRDFDP--------------------RISLDGGIDG--LSH---YRTIADG-VSRH 216 L+ F P + DGG+ L H +R A+G + +H Sbjct: 315 GFLQDPRFSPFGKLAPKSKADFAFLLHGYFHLKQDGGVMAIVLPHGVLFRGNAEGAIRKH 374 Query: 217 LNKDGLCSVEIG------YNQKVDVVRIF-----ESRKLFLVNAFKDY--GGNDRVL 260 L ++G IG +N + I + R ++ ++A K++ G N ++ Sbjct: 375 LLEEGAIDTVIGLPANIFFNTSIPTTVIILKKDRQERDVYFIDASKEFTKGKNQNIM 431 >gi|255025584|ref|ZP_05297570.1| hypothetical protein LmonocytFSL_03220 [Listeria monocytogenes FSL J2-003] Length = 201 Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust. Identities = 25/74 (33%), Positives = 40/74 (54%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 +ILD+G G G + L + K P + VD++ +ALE+AK NA N ++ S + + Sbjct: 62 KILDVGCGYGPMGLTVAKAFPDSQIEMVDVNLRALELAKENAEINKITNTHIYESSVYDN 121 Query: 160 SVEGLFDVIVSNPP 173 + I+SNPP Sbjct: 122 VTANDYQAIISNPP 135 >gi|115372133|ref|ZP_01459444.1| methyltransferase small [Stigmatella aurantiaca DW4/3-1] gi|310818836|ref|YP_003951194.1| methyltransferase [Stigmatella aurantiaca DW4/3-1] gi|115370835|gb|EAU69759.1| methyltransferase small [Stigmatella aurantiaca DW4/3-1] gi|309391908|gb|ADO69367.1| Methyltransferase [Stigmatella aurantiaca DW4/3-1] Length = 321 Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust. Identities = 44/140 (31%), Positives = 68/140 (48%), Gaps = 13/140 (9%) Query: 37 FLTNAIVRSL-KHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEK 95 +LTN +RSL + S+ L D Y TL D+ P+T +AL +P + Sbjct: 91 YLTNGWLRSLVRFSSLGEGLYLHDAYP---TLGEDSVFFGPDTYRF--AALLARVPGKFQ 145 Query: 96 RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155 R V DLG G+GA L++ V D+S +AL ++ NA N + + L S Sbjct: 146 RAV----DLGCGSGAGGLSMGARVGSL--VLSDVSTRALRFSRINAALNEAPQ-VEFLAS 198 Query: 156 DWFSSVEGLFDVIVSNPPYI 175 D + G D++++NPPY+ Sbjct: 199 DGLRGIPGGVDLVMANPPYL 218 >gi|284028566|ref|YP_003378497.1| methyltransferase small [Kribbella flavida DSM 17836] gi|283807859|gb|ADB29698.1| methyltransferase small [Kribbella flavida DSM 17836] Length = 481 Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust. Identities = 37/125 (29%), Positives = 54/125 (43%), Gaps = 14/125 (11%) Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 LDLGTG G L L + V D++ +AL++ + A N + D + V Sbjct: 159 LDLGTGCGIQALHLADRANHL--VATDVNPRALQLTRWTAALNRIE--LDVRDGSLYEPV 214 Query: 162 EGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220 G FD+IVSNPPY+ + D L R+ G G S + +HL + Sbjct: 215 AGQRFDLIVSNPPYVIAPPSDG-KLTYRET--------GFAGDSVVEQLVRQAPQHLTEG 265 Query: 221 GLCSV 225 G C + Sbjct: 266 GWCQL 270 >gi|16802302|ref|NP_463787.1| hypothetical protein lmo0256 [Listeria monocytogenes EGD-e] gi|224502450|ref|ZP_03670757.1| hypothetical protein LmonFR_08004 [Listeria monocytogenes FSL R2-561] gi|255028588|ref|ZP_05300539.1| hypothetical protein LmonL_04186 [Listeria monocytogenes LO28] gi|16409621|emb|CAD00783.1| lmo0256 [Listeria monocytogenes EGD-e] Length = 201 Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust. Identities = 25/74 (33%), Positives = 40/74 (54%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 +ILD+G G G + L + K P + VD++ +ALE+AK NA N ++ S + + Sbjct: 62 KILDVGCGYGPMGLTVAKAFPDSQIEMVDVNLRALELAKENAEINKITNTHIYESSVYDN 121 Query: 160 SVEGLFDVIVSNPP 173 + I+SNPP Sbjct: 122 VTANDYQAIISNPP 135 >gi|227550698|ref|ZP_03980747.1| methyltransferase [Enterococcus faecium TX1330] gi|293379424|ref|ZP_06625568.1| methyltransferase small domain protein [Enterococcus faecium PC4.1] gi|227180159|gb|EEI61131.1| methyltransferase [Enterococcus faecium TX1330] gi|292641947|gb|EFF60113.1| methyltransferase small domain protein [Enterococcus faecium PC4.1] Length = 210 Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust. Identities = 34/97 (35%), Positives = 54/97 (55%), Gaps = 8/97 (8%) Query: 78 TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137 + +L+D+ LP D +ILD+G G G + LAL + F + VDI+ +A+ +A Sbjct: 55 SRVLIDAFDWEELP-----DEGKILDVGCGYGPIGLALAFATQRFVEM-VDINERAVSLA 108 Query: 138 KSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPP 173 + NA N + E+ D QS+ + + E + IVSNPP Sbjct: 109 QGNAKRNQI-EQVDIHQSNIYEVLHEETYAAIVSNPP 144 >gi|111018616|ref|YP_701588.1| adenine specific DNA-methyltransferase [Rhodococcus jostii RHA1] gi|110818146|gb|ABG93430.1| possible adenine specific DNA-methyltransferase [Rhodococcus jostii RHA1] Length = 377 Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust. Identities = 31/108 (28%), Positives = 53/108 (49%), Gaps = 4/108 (3%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 + D+GTGTG V A+L K + ++ AL A++N G + +++D F Sbjct: 195 TQAFDIGTGTG-VLAAVLAHRGVEKVIATELDANALACARANLDRLGYGGQVQVVETDLF 253 Query: 159 SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206 EG ++V NPP+I + + + D D R+ L G + GL+ + Sbjct: 254 P--EGRAPLVVCNPPWIPARPTSPIEYAIYDPDSRM-LRGFLGGLAEH 298 >gi|323143361|ref|ZP_08078049.1| methyltransferase small domain protein [Succinatimonas hippei YIT 12066] gi|322416879|gb|EFY07525.1| methyltransferase small domain protein [Succinatimonas hippei YIT 12066] Length = 353 Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust. Identities = 32/83 (38%), Positives = 43/83 (51%), Gaps = 9/83 (10%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGV---DISCKALEIAKSNAVTNGVSERFDTLQS 155 ++ LDLG G G + L L K KG V DIS +AL +A+ NA N + E + S Sbjct: 216 LKALDLGCGCGIIGLYLAK-----KGANVTFSDISAEALFLAELNAKENDLKESCEFKAS 270 Query: 156 DWFSSVEGLFDVIVSNPPYIESV 178 G FDVI +NPP+ E + Sbjct: 271 FMLDDAPG-FDVIATNPPFHEGI 292 >gi|126725275|ref|ZP_01741117.1| Predicted SAM-dependent methyltransferase [Rhodobacterales bacterium HTCC2150] gi|126704479|gb|EBA03570.1| Predicted SAM-dependent methyltransferase [Rhodobacterales bacterium HTCC2150] Length = 398 Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust. Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 7/81 (8%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 VR+LD+ + G LA L + VD S AL +A+ A +GV++RF+T SD F Sbjct: 224 VRVLDVFSHVGGFSLAALANGAK-SALAVDGSTAALALAQEGAEASGVADRFETRCSDAF 282 Query: 159 SSVEGL------FDVIVSNPP 173 ++ L F+V++ +PP Sbjct: 283 DALTALAAEGQEFEVVICDPP 303 >gi|121534357|ref|ZP_01666181.1| methyltransferase small [Thermosinus carboxydivorans Nor1] gi|121307127|gb|EAX48045.1| methyltransferase small [Thermosinus carboxydivorans Nor1] Length = 252 Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust. Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 5/77 (6%) Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW--FS 159 +DLGTGTG + L L+ + VGV+I A E A+ + NG++++ + +D Sbjct: 51 VDLGTGTGVIGLLLVARG-AGRVVGVEIDAVAAERAQRSVQLNGLTKQMAVVAADLRRLK 109 Query: 160 SV--EGLFDVIVSNPPY 174 V G +D++V+NPPY Sbjct: 110 GVLPAGAWDLVVANPPY 126 >gi|297204301|ref|ZP_06921698.1| methyltransferase [Streptomyces sviceus ATCC 29083] gi|297148631|gb|EDY59878.2| methyltransferase [Streptomyces sviceus ATCC 29083] Length = 224 Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust. Identities = 36/107 (33%), Positives = 52/107 (48%), Gaps = 10/107 (9%) Query: 72 FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131 + P+ +T LL + LP DV L GTG LAL + VD+S Sbjct: 17 YGPQEDTALLAGALSEEPLP--PGADV-----LDVGTGTGALALQAARRGSRVTAVDVSW 69 Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIES 177 +A+ A++NA G S R + + F V G FD+I+SNPPY+ + Sbjct: 70 RAVCTARANAWLTGASVRVR--RGNLFHPVRGQSFDLILSNPPYVPA 114 >gi|293556577|ref|ZP_06675145.1| 16S RNA methylase [Enterococcus faecium E1039] gi|293571203|ref|ZP_06682238.1| methyltransferase small domain superfamily [Enterococcus faecium E980] gi|291601253|gb|EFF31537.1| 16S RNA methylase [Enterococcus faecium E1039] gi|291608714|gb|EFF38001.1| methyltransferase small domain superfamily [Enterococcus faecium E980] Length = 210 Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust. Identities = 34/97 (35%), Positives = 54/97 (55%), Gaps = 8/97 (8%) Query: 78 TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137 + +L+D+ LP D +ILD+G G G + LAL + F + VDI+ +A+ +A Sbjct: 55 SRVLIDAFDWEELP-----DEGKILDVGCGYGPIGLALAFATQRFVEM-VDINERAVSLA 108 Query: 138 KSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPP 173 + NA N + E+ D QS+ + + E + IVSNPP Sbjct: 109 QGNAKRNQI-EQVDIHQSNIYEVLHEETYAAIVSNPP 144 >gi|77359508|ref|YP_339083.1| ribosomal RNA small subunit methyltransferase C [Pseudoalteromonas haloplanktis TAC125] gi|123589605|sp|Q3ILJ2|RSMC_PSEHT RecName: Full=Ribosomal RNA small subunit methyltransferase C; AltName: Full=16S rRNA m2G1207 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rsmC gi|76874419|emb|CAI85640.1| putative ribosomal RNA small subunit methyltransferase C [Pseudoalteromonas haloplanktis TAC125] Length = 341 Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust. Identities = 30/104 (28%), Positives = 52/104 (50%), Gaps = 10/104 (9%) Query: 78 TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137 T++L+++A P I++ V LD G G G + L ++P V D+S A+ Sbjct: 192 TKILLENA-----PLIKQGTV---LDFGCGAGLIATYLGLQNPALSFVCSDVSALAIYAT 243 Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181 N + + + L SD +++ G FD+I+SNPP+ + D Sbjct: 244 TQTLKLNNI--KGEALLSDGLTNITGKFDLIISNPPFHTGIATD 285 >gi|30410819|ref|NP_660662.2| hypothetical protein BUsg319 [Buchnera aphidicola str. Sg (Schizaphis graminum)] gi|25091200|sp|Q8K9L5|RSMC_BUCAP RecName: Full=Ribosomal RNA small subunit methyltransferase C; AltName: Full=16S rRNA m2G1207 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rsmC Length = 336 Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust. Identities = 25/74 (33%), Positives = 45/74 (60%), Gaps = 2/74 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 +ILD+G G+G + +++L++SP +D ALE +K+ N + + L S+ +S Sbjct: 198 KILDVGCGSGFLSVSILRKSPKCVVTMIDRKLSALESSKATLDANFF--KGEVLSSNIYS 255 Query: 160 SVEGLFDVIVSNPP 173 ++ F++IVSNPP Sbjct: 256 NIFKKFNMIVSNPP 269 >gi|6165642|gb|AAF04626.1| DNA methyltransferase [Geobacillus stearothermophilus] Length = 579 Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust. Identities = 50/175 (28%), Positives = 82/175 (46%), Gaps = 27/175 (15%) Query: 94 EKRDVVRILDLGTGTGAVCLALLKESPF----FKGVGVDISCKALEIAKSNAVTNGVSER 149 EK V+R+LD G G + LA+ K + + +GVD A+ IA +G + Sbjct: 40 EKNRVIRVLDPACGDGELLLAINKVAQSMNIQLELIGVDFDIDAINIANERLSRSG-HKN 98 Query: 150 FDTLQSDWFSSV-EG----LF--------DVIVSNPPYIESVIVDCLGLE-VRDFDPRIS 195 F + D+ V EG LF D+I++NPPY+ + I LG E + + + Sbjct: 99 FRLINKDFLEMVSEGDNYDLFNIEELEPVDIIIANPPYVRTQI---LGAEKAQKLREKFN 155 Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAF 250 L G +D Y+ +++ L +G+ V I N+ + + ES + FLV+ F Sbjct: 156 LKGRVD---LYQAFLVAMTQQLKSNGIIGV-ITSNRYL-TTKGGESTRKFLVSNF 205 >gi|320450558|ref|YP_004202654.1| ribosomal protein L11 methyltransferase [Thermus scotoductus SA-01] gi|320150727|gb|ADW22105.1| ribosomal protein L11 methyltransferase [Thermus scotoductus SA-01] Length = 254 Score = 44.3 bits (103), Expect = 0.020, Method: Compositional matrix adjust. Identities = 38/97 (39%), Positives = 51/97 (52%), Gaps = 12/97 (12%) Query: 77 ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136 ET L SALA L R R+LDLGTG+G + +A K K +GVDI L Sbjct: 105 ETTRLALSALARHL-----RPGERVLDLGTGSGILAIAAAKLG--GKALGVDIDETVLPQ 157 Query: 137 AKSNAVTNGVSERF--DTLQSDWFSSVEGLFDVIVSN 171 A+ NA NGV RF +L+ + G F+++V+N Sbjct: 158 AEENARRNGVGVRFLPGSLEE---ALPYGPFNLMVAN 191 >gi|255024743|ref|ZP_05296729.1| hypothetical protein LmonocyFSL_17011 [Listeria monocytogenes FSL J1-208] Length = 196 Score = 44.3 bits (103), Expect = 0.020, Method: Compositional matrix adjust. Identities = 25/74 (33%), Positives = 40/74 (54%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 +ILD+G G G + L + K P + VD++ +ALE+AK NA N ++ S + + Sbjct: 57 KILDVGCGYGPMGLTVAKALPDSQIEMVDVNLRALELAKENAEINKITNTHIYESSVYDN 116 Query: 160 SVEGLFDVIVSNPP 173 + I+SNPP Sbjct: 117 VTANDYQAIISNPP 130 >gi|327398976|ref|YP_004339845.1| type 11 methyltransferase [Hippea maritima DSM 10411] gi|327181605|gb|AEA33786.1| Methyltransferase type 11 [Hippea maritima DSM 10411] Length = 199 Score = 44.3 bits (103), Expect = 0.020, Method: Compositional matrix adjust. Identities = 36/100 (36%), Positives = 51/100 (51%), Gaps = 8/100 (8%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 RILD+G G+G + +A LK + VG DI A+ N NGVS+ +D S Sbjct: 64 RILDVGIGSGILSIAALKLGAK-EAVGFDIEESAIRECIENGKLNGVSDGLVCFVADSPS 122 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199 S+ G FDV+ +N I D + L + D R++ DGG Sbjct: 123 SISGSFDVVFAN-------IFDDIILAMCDEINRLTKDGG 155 >gi|33594830|ref|NP_882473.1| putative methyltransferase [Bordetella parapertussis 12822] gi|33599101|ref|NP_886661.1| putative methyltransferase [Bordetella bronchiseptica RB50] gi|33564906|emb|CAE39851.1| Putative methyltransferase [Bordetella parapertussis] gi|33575147|emb|CAE30610.1| Putative methyltransferase [Bordetella bronchiseptica RB50] Length = 281 Score = 44.3 bits (103), Expect = 0.020, Method: Compositional matrix adjust. Identities = 32/113 (28%), Positives = 59/113 (52%), Gaps = 12/113 (10%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 ++DLG+G G + +A +++ +GVDI + + A++NA G+++R +Q D Sbjct: 68 VIDLGSGDGRIAIAAVRDRGARSAMGVDIDPERIAEARANARKAGLADRVTFVQQD---- 123 Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI--SLDGGIDGLSHYRTIAD 211 LFD +S + ++ + L++R PRI SL G +SH T+ + Sbjct: 124 ---LFDTDISKATVLTMYLLPDVNLKLR---PRILNSLAPGTRVVSHAFTMGE 170 >gi|297526045|ref|YP_003668069.1| methyltransferase small [Staphylothermus hellenicus DSM 12710] gi|297254961|gb|ADI31170.1| methyltransferase small [Staphylothermus hellenicus DSM 12710] Length = 175 Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust. Identities = 30/79 (37%), Positives = 43/79 (54%), Gaps = 4/79 (5%) Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER--FDTLQSDWFS 159 +DLG GTG V L LL ++ K V +DI+ AL N N R ++ SD S Sbjct: 14 IDLGCGTGVVGLYLLSKNICSKTVFIDINPVALLNTVYNLKLNYYQHRGLVASISSD--S 71 Query: 160 SVEGLFDVIVSNPPYIESV 178 +E FD++V+NPPY+ + Sbjct: 72 ILENYFDLVVANPPYLPGI 90 >gi|253582135|ref|ZP_04859359.1| methyltransferase [Fusobacterium varium ATCC 27725] gi|251836484|gb|EES65021.1| methyltransferase [Fusobacterium varium ATCC 27725] Length = 244 Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust. Identities = 38/134 (28%), Positives = 64/134 (47%), Gaps = 15/134 (11%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 +DS L I K + I+DLGTG GA+ L L K++ K G++I + +A+ N Sbjct: 30 LDSLLISEFASITK-NTNNIVDLGTGNGAIPLFLSKKTK-AKITGIEIQEISSNLARRNV 87 Query: 142 VTNGVSERFDTLQSD------WFSSVEGLFDVIVSNPPYI-----ESVIVDCLGLEVRDF 190 N + + + D +F++ D++VSNPP+ E ++ D L + Sbjct: 88 KLNNLENQITIINDDMKNWRKYFTT--HTLDMVVSNPPFFKFNGNEELLNDLTQLTLARH 145 Query: 191 DPRISLDGGIDGLS 204 + I+LD I+ S Sbjct: 146 EISITLDTLIETAS 159 >gi|222100464|ref|YP_002535032.1| Ribosomal protein L11 methyltransferase [Thermotoga neapolitana DSM 4359] gi|254783321|sp|B9K9N3|PRMA_THENN RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11 Mtase gi|221572854|gb|ACM23666.1| Ribosomal protein L11 methyltransferase [Thermotoga neapolitana DSM 4359] Length = 264 Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust. Identities = 26/72 (36%), Positives = 42/72 (58%), Gaps = 3/72 (4%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R++D+G GTG + + K + + VD+ +A+E+AK N N V +SD S Sbjct: 132 RVVDVGCGTGILAIVAKKLGASY-VMAVDVDEQAVEVAKENVQKNSVD--VIVKRSDLLS 188 Query: 160 SVEGLFDVIVSN 171 V+G+FD++VSN Sbjct: 189 EVDGVFDLVVSN 200 >gi|255038863|ref|YP_003089484.1| methyltransferase small [Dyadobacter fermentans DSM 18053] gi|262828188|sp|C6VS84|TRMN6_DYAFD RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName: Full=tRNA m6A37 methyltransferase gi|254951619|gb|ACT96319.1| methyltransferase small [Dyadobacter fermentans DSM 18053] Length = 240 Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust. Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 1/82 (1%) Query: 97 DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 D RILD+G GTG + L + + + + V+I +A A N + +R S Sbjct: 38 DADRILDIGAGTGLLSLMVAQRNTYAMIDAVEIDAEAFYQAGENVEQSPFHDRITLFHSA 97 Query: 157 WFSSV-EGLFDVIVSNPPYIES 177 V E +DVI++NPP+ +S Sbjct: 98 VQEFVSEHRYDVIITNPPFFQS 119 >gi|254831922|ref|ZP_05236577.1| hypothetical protein Lmon1_11235 [Listeria monocytogenes 10403S] Length = 201 Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust. Identities = 25/74 (33%), Positives = 40/74 (54%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 +ILD+G G G + L + K P + VD++ +ALE+AK NA N ++ S + + Sbjct: 62 KILDVGCGYGPMGLTVAKAFPDSQIEMVDVNLRALELAKENAEINKITNTHIYESSVYDN 121 Query: 160 SVEGLFDVIVSNPP 173 + I+SNPP Sbjct: 122 VTANDYQAIISNPP 135 >gi|329940125|ref|ZP_08289407.1| methyltransferase type 12 [Streptomyces griseoaurantiacus M045] gi|329300951|gb|EGG44847.1| methyltransferase type 12 [Streptomyces griseoaurantiacus M045] Length = 509 Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust. Identities = 22/57 (38%), Positives = 32/57 (56%) Query: 93 IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 + + R+LDLG G G + LL++ F + VGVD+S +AL IA N + ER Sbjct: 294 LRRHGAARVLDLGCGEGQLVQTLLRDPAFTEIVGVDVSVRALTIASRRLKLNTMGER 350 >gi|227485311|ref|ZP_03915627.1| site-specific DNA-methyltransferase (adenine-specific) [Anaerococcus lactolyticus ATCC 51172] gi|227236771|gb|EEI86786.1| site-specific DNA-methyltransferase (adenine-specific) [Anaerococcus lactolyticus ATCC 51172] Length = 373 Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust. Identities = 41/127 (32%), Positives = 57/127 (44%), Gaps = 18/127 (14%) Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS-SVEGLFDVIVSNPPYIESVIVDCL 183 +G DIS +A+ +AK NA+ GV E + D+ S ++ + V +SNPPY Sbjct: 254 LGSDISGRAISLAKQNAINAGVEEDISFITRDFGSVAISNDYGVFISNPPY--------- 304 Query: 184 GLEVRDFD-----PRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN--QKVDV 235 GL + D D +I+ G+D S Y AD K L YN QKVD Sbjct: 305 GLRLSDTDLSEIYKKINHKLAGLDTWSLYFITADDKFDRQFKRVLSKKRKLYNGGQKVDF 364 Query: 236 VRIFESR 242 + F R Sbjct: 365 YQYFGKR 371 >gi|326315445|ref|YP_004233117.1| adenine-specific DNA-methyltransferase [Acidovorax avenae subsp. avenae ATCC 19860] gi|323372281|gb|ADX44550.1| Site-specific DNA-methyltransferase (adenine-specific) [Acidovorax avenae subsp. avenae ATCC 19860] Length = 522 Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust. Identities = 25/95 (26%), Positives = 48/95 (50%), Gaps = 5/95 (5%) Query: 92 RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151 R +++ +VR++D G G+G LA L+ P + V ++ I ++N V G ++R + Sbjct: 85 RRQRKSIVRLVDPGAGSGRFTLAALRMYPKAEAVAAEMDPTVALILRANLVAMGFADRTE 144 Query: 152 TLQSDW----FSSVEGLFDVIVSNPPYIESVIVDC 182 D+ +V+G + + NPPY+ +D Sbjct: 145 VRVGDFRDLKLPAVKGT-TLFIGNPPYVRHHDIDA 178 >gi|111220018|ref|YP_710812.1| putative adenine-specific methylase [Frankia alni ACN14a] gi|111147550|emb|CAJ59203.1| Putative adenine-specific methylase (partial) [Frankia alni ACN14a] Length = 140 Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust. Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 1/76 (1%) Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPR 193 + A+ N G+ D L + ++ G D++V N PY+ + + + E R+ +PR Sbjct: 1 MRCARRNVAGGGLVHEGD-LFAALPRTLRGRVDLLVVNAPYVPTDAIGLMPPEAREHEPR 59 Query: 194 ISLDGGIDGLSHYRTI 209 ++LDGG DGL R + Sbjct: 60 LALDGGTDGLDVLRRV 75 >gi|296166757|ref|ZP_06849181.1| methyltransferase [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295897927|gb|EFG77509.1| methyltransferase [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 229 Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust. Identities = 37/122 (30%), Positives = 62/122 (50%), Gaps = 15/122 (12%) Query: 60 FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119 + ++ +++ + P+ ++ LLV+ SL I R R+LDL TG+G V +A + Sbjct: 5 YPGPAVSAAANVYRPQDDSCLLVEVMRESSL--IPGR---RVLDLCTGSGFVAIAAAE-- 57 Query: 120 PFFKGVGV---DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYI 175 G V DI A+ ++ NA GV D + W +++ FDV+VSNPPY+ Sbjct: 58 --LGGADVTAFDICPHAVGCSRGNAAAAGVD--VDVRRGTWSDALDCAPFDVVVSNPPYV 113 Query: 176 ES 177 + Sbjct: 114 PT 115 >gi|119384761|ref|YP_915817.1| methyltransferase small [Paracoccus denitrificans PD1222] gi|119374528|gb|ABL70121.1| methyltransferase small [Paracoccus denitrificans PD1222] Length = 252 Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust. Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 6/78 (7%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +L+LG G G L L P + G+++ E+A+ NA TN ++ Q D Sbjct: 44 VLELGCGAGVAMLCLGARVPGLRLAGLELQPSYAELARQNAATNAIAAELH--QGDLARM 101 Query: 161 VEGL----FDVIVSNPPY 174 L FD +++NPPY Sbjct: 102 PAALREQSFDHVIANPPY 119 >gi|56695236|ref|YP_165584.1| hypothetical protein SPO0321 [Ruegeria pomeroyi DSS-3] gi|56676973|gb|AAV93639.1| conserved hypothetical protein [Ruegeria pomeroyi DSS-3] Length = 257 Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust. Identities = 30/107 (28%), Positives = 50/107 (46%), Gaps = 8/107 (7%) Query: 72 FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131 F+PR VD F + + +L+LG G GA L+L P GV++ Sbjct: 22 FQPRDGYRAGVDPV--FLAASVAAQTGQSVLELGCGAGAAILSLGARVPDLALTGVELQP 79 Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPY 174 ++A+ NA N ++ D ++ D + + L FD +++NPPY Sbjct: 80 GYADLARRNAAANDIA--LDVVEGDIAALPQALRQQSFDHVIANPPY 124 >gi|257893152|ref|ZP_05672805.1| rRNA small subunit methyltransferase C [Enterococcus faecium 1,231,408] gi|257829531|gb|EEV56138.1| rRNA small subunit methyltransferase C [Enterococcus faecium 1,231,408] Length = 201 Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust. Identities = 34/97 (35%), Positives = 54/97 (55%), Gaps = 8/97 (8%) Query: 78 TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137 + +L+D+ LP D +ILD+G G G + LAL + F + VDI+ +A+ +A Sbjct: 46 SRVLIDAFDWKELP-----DEGKILDVGCGYGPIGLALAFATQRFVEM-VDINERAVSLA 99 Query: 138 KSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPP 173 + NA N + E+ D QS+ + + E + IVSNPP Sbjct: 100 QGNAKRNQI-EQVDIHQSNIYEVLHEETYAAIVSNPP 135 >gi|332535482|ref|ZP_08411263.1| putative ribosomal RNA small subunit methyltransferase C [Pseudoalteromonas haloplanktis ANT/505] gi|332035092|gb|EGI71607.1| putative ribosomal RNA small subunit methyltransferase C [Pseudoalteromonas haloplanktis ANT/505] Length = 341 Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust. Identities = 29/104 (27%), Positives = 52/104 (50%), Gaps = 10/104 (9%) Query: 78 TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137 T++L+++A P I++ ++LD G G G + L +P + V D+S A Sbjct: 192 TKVLLENA-----PTIKQG---KVLDFGCGAGLIATFLGLHNPALEFVCSDVSALATYAT 243 Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181 + N ++ + + SD S+ G FD+I+SNPP+ + D Sbjct: 244 QQTLKLNNING--EAILSDGLKSINGKFDLIISNPPFHTGIATD 285 >gi|120405642|ref|YP_955471.1| type 11 methyltransferase [Mycobacterium vanbaalenii PYR-1] gi|119958460|gb|ABM15465.1| Methyltransferase type 11 [Mycobacterium vanbaalenii PYR-1] Length = 280 Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust. Identities = 34/97 (35%), Positives = 47/97 (48%), Gaps = 7/97 (7%) Query: 75 RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG-VGVDISCKA 133 +P +L+VDS A + PR + ILDLG GTGA LAL + G G+DIS Sbjct: 33 KPFEDLIVDSVAAAAGPREQ------ILDLGCGTGATTLALAERLGAHGGCTGIDISEPM 86 Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170 + A++ A + F + F FDV+VS Sbjct: 87 IHAARTRARDRNLPVEFVVGDAQSFPFQPNTFDVMVS 123 >gi|321314402|ref|YP_004206689.1| putative RNA methyltransferase [Bacillus subtilis BSn5] gi|320020676|gb|ADV95662.1| putative RNA methyltransferase [Bacillus subtilis BSn5] Length = 461 Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust. Identities = 45/166 (27%), Positives = 80/166 (48%), Gaps = 29/166 (17%) Query: 29 VLDDRQRFFLTNAIVRSLKHESIHRILG------WRDFY------NVRLTLSSDTF-EPR 75 + D +F +IV+++ + I G W + Y +V+ +S+ +F + Sbjct: 233 IEDITAQFPHVKSIVQNINPNKTNVIFGNETNVIWGEEYIYDLIGDVKFAISARSFYQVN 292 Query: 76 PE-TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134 PE T++L D AL ++ E + ++D G G + L L K++ K GV+I +A+ Sbjct: 293 PEQTKVLYDKALEYA----ELQGEETVIDAYCGIGTISLFLAKQAK--KVYGVEIVPEAI 346 Query: 135 EIAKSNAVTNGVSE------RFDTLQSDWFSSVEGL-FDVIVSNPP 173 E AK NA NG++ +T+ W+ EG+ D +V +PP Sbjct: 347 EDAKRNAELNGITNAEFAVGEAETVIPKWYE--EGIAADTLVVDPP 390 >gi|309972420|gb|ADO95621.1| Putative methyltransferase [Haemophilus influenzae R2846] Length = 240 Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust. Identities = 27/84 (32%), Positives = 44/84 (52%), Gaps = 4/84 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD--- 156 ILD+G+GTG + L L + + + V++ A + A+ N + R +Q+D Sbjct: 47 ILDMGSGTGLLALMLAQRTEENCQIQAVELDPIAAKQAQENINNSVWKNRIQLIQTDIQH 106 Query: 157 WFSSVEGLFDVIVSNPPYIESVIV 180 + + E FD+IV+NPPY E I Sbjct: 107 FLQTTEQTFDLIVANPPYFEQGIA 130 >gi|126463164|ref|YP_001044278.1| methyltransferase small [Rhodobacter sphaeroides ATCC 17029] gi|126104828|gb|ABN77506.1| methyltransferase small [Rhodobacter sphaeroides ATCC 17029] Length = 253 Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust. Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 5/80 (6%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +L+LG G G L L P + G+++ +A+ NA NGV+ + ++ D + Sbjct: 47 VLELGCGAGVASLCLAARVPGLRLAGLELQPAYAALARENAALNGVA--LEVVEGDLSAM 104 Query: 161 VEGL---FDVIVSNPPYIES 177 L FD +++NPPY + Sbjct: 105 PAALRQSFDHVIANPPYYPA 124 >gi|297625830|ref|YP_003687593.1| methyltransferase [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296921595|emb|CBL56149.1| methyltransferase [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length = 209 Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust. Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 1/75 (1%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 R LDLG G G + +AL E P + +D++ +A+E+ NA GV+ + D Sbjct: 69 ARFLDLGCGFGPIAVALATECPRARVDAIDVNERAVELTAMNAKALGVASQVSASAPDQV 128 Query: 159 SSVEGLFDVIVSNPP 173 + + +D I SNPP Sbjct: 129 PA-DVRYDEIWSNPP 142 >gi|257888043|ref|ZP_05667696.1| rRNA small subunit methyltransferase C [Enterococcus faecium 1,141,733] gi|257896338|ref|ZP_05675991.1| rRNA small subunit methyltransferase C [Enterococcus faecium Com12] gi|257899313|ref|ZP_05678966.1| rRNA small subunit methyltransferase C [Enterococcus faecium Com15] gi|257824097|gb|EEV51029.1| rRNA small subunit methyltransferase C [Enterococcus faecium 1,141,733] gi|257832903|gb|EEV59324.1| rRNA small subunit methyltransferase C [Enterococcus faecium Com12] gi|257837225|gb|EEV62299.1| rRNA small subunit methyltransferase C [Enterococcus faecium Com15] Length = 201 Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust. Identities = 34/97 (35%), Positives = 54/97 (55%), Gaps = 8/97 (8%) Query: 78 TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137 + +L+D+ LP D +ILD+G G G + LAL + F + VDI+ +A+ +A Sbjct: 46 SRVLIDAFDWEELP-----DEGKILDVGCGYGPIGLALAFATQRFVEM-VDINERAVSLA 99 Query: 138 KSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPP 173 + NA N + E+ D QS+ + + E + IVSNPP Sbjct: 100 QGNAKRNQI-EQVDIHQSNIYEVLHEETYAAIVSNPP 135 >gi|217965657|ref|YP_002351335.1| methyltransferase small domain superfamily [Listeria monocytogenes HCC23] gi|217334927|gb|ACK40721.1| methyltransferase small domain superfamily [Listeria monocytogenes HCC23] gi|307569795|emb|CAR82974.1| ribosomal RNA small subunit methyltransferase C [Listeria monocytogenes L99] Length = 201 Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust. Identities = 25/74 (33%), Positives = 40/74 (54%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 +ILD+G G G + L + K P + VD++ +ALE+AK NA N ++ S + + Sbjct: 62 KILDVGCGYGPMGLTVAKAFPDSQIEMVDVNLRALELAKENAEINKITNTHIYESSVYDN 121 Query: 160 SVEGLFDVIVSNPP 173 + I+SNPP Sbjct: 122 VTANDYQAIISNPP 135 >gi|85814038|emb|CAF31454.1| putative gentamicin methyltransferase [Micromonospora echinospora] Length = 321 Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust. Identities = 43/167 (25%), Positives = 69/167 (41%), Gaps = 17/167 (10%) Query: 11 LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70 L R G Q ++D +DD F L+ +H ++ D Sbjct: 51 LTREVGADGRQALLDSGMAVDDGTTF------SSPLRGHQLHGVVVLSDPDVEEEVQHRW 104 Query: 71 TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130 +P E +LL+ L +R R LD+G G+G + L L + +GVD++ Sbjct: 105 YVDPLWEADLLIRLML--------RRGGARALDMGCGSGVLSLVLADR--YESVLGVDVN 154 Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIES 177 +A+ +++ NA NG++ + D F EG F IV N P E Sbjct: 155 PRAVALSRLNAALNGLTN-VTFREGDMFEPAEGRFSRIVFNSPTNEE 200 >gi|257866503|ref|ZP_05646156.1| rRNA small subunit methyltransferase C [Enterococcus casseliflavus EC30] gi|257872981|ref|ZP_05652634.1| rRNA small subunit methyltransferase C [Enterococcus casseliflavus EC10] gi|257876107|ref|ZP_05655760.1| rRNA small subunit methyltransferase C [Enterococcus casseliflavus EC20] gi|257800461|gb|EEV29489.1| rRNA small subunit methyltransferase C [Enterococcus casseliflavus EC30] gi|257807145|gb|EEV35967.1| rRNA small subunit methyltransferase C [Enterococcus casseliflavus EC10] gi|257810273|gb|EEV39093.1| rRNA small subunit methyltransferase C [Enterococcus casseliflavus EC20] Length = 201 Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust. Identities = 45/158 (28%), Positives = 75/158 (47%), Gaps = 25/158 (15%) Query: 17 LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRP 76 +S+H +PD+ D Q F L+ ++ H F S DT + Sbjct: 1 MSNHYYTENPDTAHDFEQWSF-------ELRGKNFH-------FVTDSGVFSRDTVDYG- 45 Query: 77 ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136 + +L+D+ LP +LD+G G G V LAL S + +DI+ +A+++ Sbjct: 46 -SRVLIDAFEWGELPE------GSLLDVGCGYGPVGLALAYASQRPVEM-IDINQRAVDL 97 Query: 137 AKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPP 173 AK NA NG+ E+ D QS+ ++ + + + I+SNPP Sbjct: 98 AKGNAQRNGI-EQVDIHQSNIYAQLNQPAYAAILSNPP 134 >gi|225682438|gb|EEH20722.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03] Length = 428 Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust. Identities = 37/114 (32%), Positives = 61/114 (53%), Gaps = 21/114 (18%) Query: 76 PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG---VGVDISCK 132 PE + ++ F L + ILDLGTG G++ LALL++ F+ VGVD S K Sbjct: 196 PEKVMKFLTSECFPLAPCNTQSQPIILDLGTGNGSM-LALLRDEGGFEASRMVGVDYSPK 254 Query: 133 ALEIAK-------SNAVTNGVSE-RFD--------TLQS-DWFSSVEGLFDVIV 169 ++E+A+ + A ++ +S RF+ +Q+ DWF + EG FD+++ Sbjct: 255 SIELARRLHDGSTTTAQSSDLSRIRFEVWDVFDNRPVQTLDWFPAAEGGFDIVL 308 >gi|153008078|ref|YP_001369293.1| methyltransferase small [Ochrobactrum anthropi ATCC 49188] gi|151559966|gb|ABS13464.1| methyltransferase small [Ochrobactrum anthropi ATCC 49188] Length = 340 Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust. Identities = 31/115 (26%), Positives = 53/115 (46%), Gaps = 8/115 (6%) Query: 73 EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV-DISC 131 EP + ++D A +P +EK + DLG G G + LK + K + + + Sbjct: 172 EPGMFSHGVIDKGSALLVPHMEKIFFGNVADLGAGWGYLAAQCLKFADRIKSIDLYEADY 231 Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWF----SSVEGLFDVIVSNPPYIESVIVDC 182 +ALE A+ N G S + +WF + G++D ++ NPP+ E + D Sbjct: 232 EALEAARGNLERLGASV---PISFNWFDVTSEKMAGIYDTVIMNPPFHEGRVTDV 283 >gi|294637766|ref|ZP_06716040.1| ribosomal protein L11 methyltransferase [Edwardsiella tarda ATCC 23685] gi|291089058|gb|EFE21619.1| ribosomal protein L11 methyltransferase [Edwardsiella tarda ATCC 23685] Length = 246 Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust. Identities = 35/112 (31%), Positives = 60/112 (53%), Gaps = 17/112 (15%) Query: 74 PRPET-ELLVDSALAFS----------LPRIEKRDVV--RILDLGTGTGAVCLALLKESP 120 P PE +++D LAF L ++ D+V ++D G G+G + +A LK Sbjct: 122 PDPEAVNVMLDPGLAFGTGTHPTTALCLQWLDGLDLVGKTVIDFGCGSGILAIAALKLG- 180 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFSSVEGLFDVIVSN 171 + +G+DI +A++ ++ NA NGVSER + L D +++ DV+V+N Sbjct: 181 AARAIGIDIDPQAIQASRDNAERNGVSERLELYLPQDQPANLSA--DVVVAN 230 >gi|291296035|ref|YP_003507433.1| ubiquinone/menaquinone biosynthesis methyltransferase [Meiothermus ruber DSM 1279] gi|290470994|gb|ADD28413.1| ubiquinone/menaquinone biosynthesis methyltransferase [Meiothermus ruber DSM 1279] Length = 254 Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust. Identities = 45/165 (27%), Positives = 71/165 (43%), Gaps = 38/165 (23%) Query: 95 KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---D 151 +++ RILDL TGTG + L L K +P + +G D + LE+A+ A+ G+ F D Sbjct: 48 EKNPSRILDLATGTGDIALLLKKVAPEAEVIGGDFAPPMLELARQKALKAGLEVPFVEAD 107 Query: 152 TLQ--------------------SDWFSSVEGLFDVIVSN--------PPYIESVIVDCL 183 L+ +D+ ++ L+ VI PP S L Sbjct: 108 ALRLPFPDQHFDAVVIAFGFRNFADYHKALVELYRVIAPGGRLCILEFPPPPRS----GL 163 Query: 184 GLEVRDFDPRI-SLDGGI--DGLSHYRTIADGVSRHLNKDGLCSV 225 G+ R + RI + GG+ + YR + D V R N D L ++ Sbjct: 164 GVLYRFYFTRILPIIGGLVSGSAAAYRYLPDSVERFPNPDTLANM 208 >gi|217076184|ref|YP_002333900.1| ribosomal RNA small subunit methyltransferase C [Thermosipho africanus TCF52B] gi|217036037|gb|ACJ74559.1| ribosomal RNA small subunit methyltransferase C [Thermosipho africanus TCF52B] Length = 198 Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust. Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 5/77 (6%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE--RFDTLQSDWF 158 +LD+G G G + + L KE+P DI+ +A+E AK N+ N + R L W Sbjct: 61 VLDIGCGYGVIGITLKKENPDINLYMSDINQRAVEFAKINSKDNNIEADIRQGYLYEPWN 120 Query: 159 SSVEGLFDVIVSNPPYI 175 + FD I+SNPP + Sbjct: 121 NMS---FDHIISNPPIV 134 >gi|325567403|ref|ZP_08144070.1| methyltransferase domain protein [Enterococcus casseliflavus ATCC 12755] gi|325158836|gb|EGC70982.1| methyltransferase domain protein [Enterococcus casseliflavus ATCC 12755] Length = 201 Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust. Identities = 28/74 (37%), Positives = 46/74 (62%), Gaps = 3/74 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LD+G G G V LAL S + +DI+ +A+++AK NA NG+ E+ D QS+ ++ Sbjct: 63 LLDVGCGYGPVGLALAYASQRPVEM-IDINQRAVDLAKGNAQRNGI-EQVDIHQSNIYAQ 120 Query: 161 V-EGLFDVIVSNPP 173 + + + I+SNPP Sbjct: 121 LNQPAYAAILSNPP 134 >gi|288927581|ref|ZP_06421428.1| SAM-dependent methyltransferase [Prevotella sp. oral taxon 317 str. F0108] gi|288330415|gb|EFC68999.1| SAM-dependent methyltransferase [Prevotella sp. oral taxon 317 str. F0108] Length = 236 Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust. Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 5/84 (5%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER--FDTLQSDW 157 RILD+GTGTG + L L + P + GV++ +A A+ N + +++ + Sbjct: 37 RILDIGTGTGLIALMLAQRYPDAEITGVELDEQAALQAQENVAGSPFAQQVTINNTPIQH 96 Query: 158 FSS---VEGLFDVIVSNPPYIESV 178 FS + G F IVSNPP+ S+ Sbjct: 97 FSHQPDLHGRFTSIVSNPPFYHSL 120 >gi|283456414|ref|YP_003360978.1| 16S RNA methylase [Bifidobacterium dentium Bd1] gi|283103048|gb|ADB10154.1| 16S RNA methylase [Bifidobacterium dentium Bd1] Length = 207 Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust. Identities = 27/72 (37%), Positives = 39/72 (54%), Gaps = 2/72 (2%) Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 LDLG G G + L + ESP +D++ +ALE+ K NA NG+ + +D Sbjct: 69 LDLGCGWGPIALTMALESPKADVWALDVNERALELTKRNAEINGIG-TIHAVTADEIPH- 126 Query: 162 EGLFDVIVSNPP 173 + FD+I SNPP Sbjct: 127 DLTFDLIWSNPP 138 >gi|296420792|ref|XP_002839952.1| hypothetical protein [Tuber melanosporum Mel28] gi|295636160|emb|CAZ84143.1| unnamed protein product [Tuber melanosporum] Length = 228 Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust. Identities = 44/179 (24%), Positives = 80/179 (44%), Gaps = 17/179 (9%) Query: 72 FEPRPETELLVDSALAFSLP----RIEKRDVVRILDLGTGTGAVCLALLKESPFFKG--- 124 +EP +T LL+D+ LA P R + + L+LG+G+G + L S G Sbjct: 16 YEPSEDTFLLLDT-LALQSPFLRSRFPQTSLPLALELGSGSGVITSFLTTHSATLFGHTS 74 Query: 125 ---VGVDISCKALEIAKSNAVTNGVSER---FDTLQSDWFSSV-EGLFDVIVSNPPYIES 177 + DIS A + K N E +++D + + G+ D++V NPPY+ + Sbjct: 75 ITTLSTDISPHAPDATKQTVSANITEESGCFLGAIRTDLATGLRPGVVDMLVFNPPYVPT 134 Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236 +V+ E ++ GG+DG+ + G+ L++ G+ + + K + V Sbjct: 135 EVVEDGNGEEGWIG--VACGGGVDGMEVTIRVLKGLKECLSESGVAYILLCERNKPEAV 191 >gi|227112915|ref|ZP_03826571.1| hypothetical protein PcarbP_08124 [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 248 Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust. Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 4/81 (4%) Query: 98 VVRILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 R+LD+G+G+G + L L + S P + V++ A + AK N + ++R D Sbjct: 48 ATRVLDIGSGSGLLALMLAQRSEPHVQIDAVELDSAASDQAKENVAASPWADRITVYAED 107 Query: 157 WFSSVE---GLFDVIVSNPPY 174 S E + +I+SNPPY Sbjct: 108 IVSFAETRAATYSLIISNPPY 128 >gi|300362314|ref|ZP_07058490.1| methyltransferase domain protein [Lactobacillus gasseri JV-V03] gi|300353305|gb|EFJ69177.1| methyltransferase domain protein [Lactobacillus gasseri JV-V03] Length = 217 Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust. Identities = 24/73 (32%), Positives = 44/73 (60%), Gaps = 1/73 (1%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 ILD+GTG G + L K P + VD++ +AL++A+ NA N ++ + QS+ + Sbjct: 80 ILDVGTGYGPMGLFAAKFWPDQEVDMVDVNERALDLARRNAKFNQIN-NVNIYQSNIYEQ 138 Query: 161 VEGLFDVIVSNPP 173 V+ + ++++NPP Sbjct: 139 VDKKYGLVITNPP 151 >gi|307152516|ref|YP_003887900.1| type 11 methyltransferase [Cyanothece sp. PCC 7822] gi|306982744|gb|ADN14625.1| Methyltransferase type 11 [Cyanothece sp. PCC 7822] Length = 223 Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust. Identities = 20/77 (25%), Positives = 43/77 (55%), Gaps = 2/77 (2%) Query: 97 DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER--FDTLQ 154 ++ ++LD GTGT + + + ++ P ++ V +D++ L+I + N ++ER + + Sbjct: 41 NIAKVLDAGTGTARIPILICQQRPGWQVVAIDLAQSMLDIGRKNIEQANLTERIQLELVD 100 Query: 155 SDWFSSVEGLFDVIVSN 171 S + FDV++SN Sbjct: 101 SKQMPYPDHYFDVVLSN 117 >gi|331701736|ref|YP_004398695.1| methyltransferase small [Lactobacillus buchneri NRRL B-30929] gi|329129079|gb|AEB73632.1| methyltransferase small [Lactobacillus buchneri NRRL B-30929] Length = 203 Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust. Identities = 23/74 (31%), Positives = 43/74 (58%), Gaps = 1/74 (1%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LD+GTG G + +++ K P + +D++ AL +AK NA N V + +S+ + Sbjct: 64 KLLDMGTGYGPIGISIAKAFPDRQIDMIDVNEVALALAKKNADANRV-DNVHIFESNIYE 122 Query: 160 SVEGLFDVIVSNPP 173 ++ + IV+NPP Sbjct: 123 AITDQYAAIVTNPP 136 >gi|156936955|ref|YP_001434751.1| methyltransferase small [Ignicoccus hospitalis KIN4/I] gi|156565939|gb|ABU81344.1| methyltransferase small [Ignicoccus hospitalis KIN4/I] Length = 194 Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust. Identities = 28/78 (35%), Positives = 43/78 (55%), Gaps = 6/78 (7%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LD+G G G + + + K +P + VD++ A++ AK NA NGV R LQ + + Sbjct: 57 KVLDVGCGYGVLGILMAKLNPNLEVYMVDVNPVAVDAAKRNAELNGV--RVTVLQGNLYE 114 Query: 160 SVEGL----FDVIVSNPP 173 + L F IVSNPP Sbjct: 115 PTDLLGIKDFSTIVSNPP 132 >gi|21228642|ref|NP_634564.1| hypothetical protein MM_2540 [Methanosarcina mazei Go1] gi|20907142|gb|AAM32236.1| Conserved hypothetical protein [Methanosarcina mazei Go1] Length = 202 Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust. Identities = 48/179 (26%), Positives = 74/179 (41%), Gaps = 22/179 (12%) Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 VRL S +EP ++ LL D+AL + P + RIL++G G+G V + Sbjct: 11 VRLGASDLVYEPAEDSFLLADAALEEAEPGM------RILEIGAGSGFVSAVIRANVKGI 64 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYI----ESV 178 + +I+ A AK+N V ++ F L+ S FD+I+ NPPY+ E Sbjct: 65 RIFATEINPHAALCAKANGVEVIRTDLFRGLKP---GSKGTPFDLILFNPPYLPTSEEEK 121 Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237 + L + DGG G D V +L G V I ++ V+ Sbjct: 122 VTGWL---------NYAFDGGASGRETLDRFLDEVRNYLKPGGKVLVLISSITGLEAVK 171 >gi|56961923|ref|YP_173645.1| 16S rRNA G1207 methylase [Bacillus clausii KSM-K16] gi|56908157|dbj|BAD62684.1| 16S rRNA G1207 methylase [Bacillus clausii KSM-K16] Length = 219 Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust. Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 4/76 (5%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE---RFDTLQSDW 157 ILD+G G G + LAL K P + V +D++ +A ++A+ NA NGV FD Sbjct: 77 ILDVGCGYGPIGLALAKADPSRRVVMIDVNERACQLAEKNAKANGVKNADIHFDERGLAG 136 Query: 158 FSSVEGLFDVIVSNPP 173 F + +V+NPP Sbjct: 137 FER-SARYAAVVTNPP 151 >gi|55981823|ref|YP_145120.1| ubiquinone/menaquinone biosynthesis methyltransferase [Thermus thermophilus HB8] gi|55773236|dbj|BAD71677.1| ubiquinone/menaquinone biosynthesis methyltransferase [Thermus thermophilus HB8] Length = 220 Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust. Identities = 25/69 (36%), Positives = 35/69 (50%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 RILDL TGTG + L L + +P + VG D + L IA+ A G+ RF + Sbjct: 39 RILDLATGTGDLALMLKERAPGAEVVGADFAPPMLAIARRKAEARGLEVRFLEADALALP 98 Query: 160 SVEGLFDVI 168 +G FD + Sbjct: 99 FPDGAFDAV 107 >gi|269219564|ref|ZP_06163418.1| putative methyltransferase small domain protein [Actinomyces sp. oral taxon 848 str. F0332] gi|269210806|gb|EEZ77146.1| putative methyltransferase small domain protein [Actinomyces sp. oral taxon 848 str. F0332] Length = 216 Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust. Identities = 25/72 (34%), Positives = 37/72 (51%) Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 +DLG G G + LAL +E+P VD++ +ALE+ + NA G S + + Sbjct: 66 IDLGCGWGPLTLALCEEAPGADVWAVDVNERALELTRKNAARAGFSPKALAADEALAALG 125 Query: 162 EGLFDVIVSNPP 173 E +I SNPP Sbjct: 126 ERKIQLIWSNPP 137 >gi|264677180|ref|YP_003277086.1| methyltransferase small [Comamonas testosteroni CNB-2] gi|262207692|gb|ACY31790.1| methyltransferase small [Comamonas testosteroni CNB-2] Length = 404 Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust. Identities = 34/114 (29%), Positives = 52/114 (45%), Gaps = 4/114 (3%) Query: 93 IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152 I + + D+G GTG + LLK V D S +AL A N G + R + Sbjct: 220 IPAAGIQQAWDIGVGTGVLSALLLKRG-VKSVVATDTSERALACACENLQRLGHASRVEL 278 Query: 153 LQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206 +D F+ +G +IV NPP++ L + D D R+ L G + GL+ + Sbjct: 279 QHADLFA--QGQAGLIVCNPPWLPGKAASVLDQAIYDEDSRM-LRGFLQGLAAH 329 >gi|17230508|ref|NP_487056.1| hypothetical protein all3016 [Nostoc sp. PCC 7120] gi|17132110|dbj|BAB74715.1| all3016 [Nostoc sp. PCC 7120] Length = 220 Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust. Identities = 21/73 (28%), Positives = 43/73 (58%), Gaps = 2/73 (2%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE--RFDTLQSDWF 158 +LD GTGT + + + ++ P ++ V +D++ L+IA + +G+ E R + + + Sbjct: 46 VLDAGTGTARIPVLICQKRPQWQLVAIDMAENMLQIATQHVQQSGLQEHIRLELVDAKRL 105 Query: 159 SSVEGLFDVIVSN 171 +G+FD++VSN Sbjct: 106 PYEDGIFDLVVSN 118 >gi|15612687|ref|NP_240990.1| hypothetical protein BH0124 [Bacillus halodurans C-125] gi|10172736|dbj|BAB03843.1| BH0124 [Bacillus halodurans C-125] Length = 201 Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust. Identities = 31/97 (31%), Positives = 51/97 (52%), Gaps = 9/97 (9%) Query: 78 TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137 + LL+++ F P IE +LD+G G G + ++L ++ VD++ +A+++A Sbjct: 46 SRLLIET---FQFPEIEGD----VLDVGCGYGPIGISLARDGGERSVHMVDVNERAIDLA 98 Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPP 173 K NA N V +SD F V+ F IV+NPP Sbjct: 99 KRNATANHVKNVV-VYRSDLFQQVQDRQFAAIVTNPP 134 >gi|315608798|ref|ZP_07883774.1| SAM-dependent methyltransferase [Prevotella buccae ATCC 33574] gi|315249492|gb|EFU29505.1| SAM-dependent methyltransferase [Prevotella buccae ATCC 33574] Length = 235 Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust. Identities = 27/80 (33%), Positives = 36/80 (45%), Gaps = 5/80 (6%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 ILD+GTGTG + L + + P G+DI A A+ NA + R + S Sbjct: 38 ILDIGTGTGLIALMMAQRFPEAHVTGIDIDGDAALQARENAADSPFGPRIEVAHSSLAGF 97 Query: 161 VEGL-----FDVIVSNPPYI 175 V FD IV NPP+ Sbjct: 98 VAAASPPLSFDSIVCNPPFF 117 >gi|21623225|gb|AAM67873.1| hypothetical 37.6 kDa protein [Buchnera aphidicola str. Sg (Schizaphis graminum)] Length = 195 Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust. Identities = 25/74 (33%), Positives = 45/74 (60%), Gaps = 2/74 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 +ILD+G G+G + +++L++SP +D ALE +K+ N + + L S+ +S Sbjct: 57 KILDVGCGSGFLSVSILRKSPKCVVTMIDRKLSALESSKATLDANFF--KGEVLSSNIYS 114 Query: 160 SVEGLFDVIVSNPP 173 ++ F++IVSNPP Sbjct: 115 NIFKKFNMIVSNPP 128 >gi|209523574|ref|ZP_03272128.1| Methyltransferase type 11 [Arthrospira maxima CS-328] gi|209495979|gb|EDZ96280.1| Methyltransferase type 11 [Arthrospira maxima CS-328] Length = 220 Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust. Identities = 21/73 (28%), Positives = 42/73 (57%), Gaps = 2/73 (2%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD--TLQSDWF 158 +LD GTGT + + + + P ++ +G+D+S L+I +SN VS + + + + Sbjct: 46 VLDAGTGTARIPILIAQHKPGWQIIGIDLSENMLKIGESNIKAAAVSNQVELALVDAKKL 105 Query: 159 SSVEGLFDVIVSN 171 ++G FD+++SN Sbjct: 106 PYIDGQFDLVISN 118 >gi|14591657|ref|NP_143744.1| hypothetical protein PH1915 [Pyrococcus horikoshii OT3] gi|3258357|dbj|BAA31040.1| 396aa long hypothetical protein [Pyrococcus horikoshii OT3] Length = 396 Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust. Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 11/82 (13%) Query: 100 RILDLGTGTG--AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 R+LD+ T TG A+ A+ +G+D S +A+E AK NA NGV +R + Sbjct: 220 RVLDVFTYTGGFAIHAAIAGADEV---IGIDKSPRAIETAKENAKLNGVEDRMKFIVGSA 276 Query: 158 FSSVEGL------FDVIVSNPP 173 F +E L FD++V +PP Sbjct: 277 FEEMEKLQKKGEKFDIVVLDPP 298 >gi|148259237|ref|YP_001233364.1| ribosomal L11 methyltransferase [Acidiphilium cryptum JF-5] gi|146400918|gb|ABQ29445.1| [LSU ribosomal protein L11P]-lysine N-methyltransferase [Acidiphilium cryptum JF-5] Length = 305 Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust. Identities = 33/97 (34%), Positives = 49/97 (50%), Gaps = 19/97 (19%) Query: 80 LLVDSALAF-------------SLPRIEKRDVV-RILDLGTGTG--AVCLALLKESPFFK 123 +L+D+ LAF +L R+ KR RILDLGTG+G A+ A + P Sbjct: 123 ILLDAGLAFGTGEHGSTRGCLLALERLAKRRAPGRILDLGTGSGILAITAAKIWGKPVLA 182 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 DI +A+ +A +NA NGV+ + SD +S+ Sbjct: 183 ---TDIDQRAVRVASANAALNGVAPLLRVIGSDGWSA 216 >gi|194854970|ref|XP_001968456.1| GG24496 [Drosophila erecta] gi|190660323|gb|EDV57515.1| GG24496 [Drosophila erecta] Length = 224 Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust. Identities = 36/122 (29%), Positives = 62/122 (50%), Gaps = 8/122 (6%) Query: 72 FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE-SPFFKGVGVDIS 130 +EP ++ LL+D AL L +E+ ++LG+G+G + AL K+ + F + DI+ Sbjct: 18 YEPAEDSFLLLD-ALEKDLEYLEQLQPHLCVELGSGSGVIITALAKKLAGFSLCLATDIN 76 Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRD 189 KA + A NG R D+++ ++ DV++ NPPY V+ L+ + Sbjct: 77 PKACNATRRTATRNGA--RLDSIRCSLADALRPQSVDVLLFNPPY---VVTSDAELQTQH 131 Query: 190 FD 191 FD Sbjct: 132 FD 133 >gi|238751412|ref|ZP_04612905.1| Ribosomal protein L11 methyltransferase [Yersinia rohdei ATCC 43380] gi|238710470|gb|EEQ02695.1| Ribosomal protein L11 methyltransferase [Yersinia rohdei ATCC 43380] Length = 293 Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust. Identities = 44/136 (32%), Positives = 69/136 (50%), Gaps = 20/136 (14%) Query: 87 AFSLPRIEKRDVV--RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN 144 A L ++ D+V I+D G G+G + +A LK + +G+DI +A++ ++ NA N Sbjct: 146 ALCLQWLDGLDLVGKTIIDFGCGSGILAIAALKLG-AARAIGIDIDPQAIQASRDNAQRN 204 Query: 145 GVSERFDT-LQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS---LDGGI 200 GVSER + L D + + DV+V+N L +R+ P IS + GG Sbjct: 205 GVSERLELYLSKDQPADLSA--DVVVAN----------ILAGPLRELAPLISVLPVTGGH 252 Query: 201 DGLSH-YRTIADGVSR 215 GLS T A GV++ Sbjct: 253 LGLSGVLATQAAGVAQ 268 >gi|325983696|ref|YP_004296098.1| methyltransferase small [Nitrosomonas sp. AL212] gi|325533215|gb|ADZ27936.1| methyltransferase small [Nitrosomonas sp. AL212] Length = 381 Score = 43.9 bits (102), Expect = 0.026, Method: Compositional matrix adjust. Identities = 40/135 (29%), Positives = 60/135 (44%), Gaps = 26/135 (19%) Query: 76 PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV----GVDISC 131 P ELLV + AF D+GTGTG + AL +GV D Sbjct: 195 PIPELLVTESTAF--------------DIGTGTGVLAAALA-----LRGVRHITATDQDA 235 Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFD 191 +AL A+ N + + + +Q+D F +G +IV NPP+I + L + D D Sbjct: 236 RALNCARDNLTRLNMLNQVELVQADLFP--QGQAALIVCNPPWIPARPSSPLEHAIFDPD 293 Query: 192 PRISLDGGIDGLSHY 206 R+ L G + GL+ + Sbjct: 294 SRM-LRGFLQGLNAH 307 >gi|299821048|ref|ZP_07052936.1| methyltransferase domain protein [Listeria grayi DSM 20601] gi|299816713|gb|EFI83949.1| methyltransferase domain protein [Listeria grayi DSM 20601] Length = 200 Score = 43.9 bits (102), Expect = 0.026, Method: Compositional matrix adjust. Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 2/75 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LD+G G G + LAL K P + VD++ +A+E+AK NA N + + +S + Sbjct: 61 KVLDVGCGYGPIGLALAKAYPAMRIDMVDVNERAIELAKENATLNHI-DNAAIFESSVYE 119 Query: 160 SVE-GLFDVIVSNPP 173 +V + I+SNPP Sbjct: 120 NVTVDDYRYILSNPP 134 >gi|239939498|ref|ZP_04691435.1| putative methyltransferase [Streptomyces roseosporus NRRL 15998] gi|239985987|ref|ZP_04706651.1| putative methyltransferase [Streptomyces roseosporus NRRL 11379] Length = 255 Score = 43.9 bits (102), Expect = 0.026, Method: Compositional matrix adjust. Identities = 45/149 (30%), Positives = 66/149 (44%), Gaps = 13/149 (8%) Query: 75 RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134 RP+T+ L+ LA ++ R +LDL TG+GA+ L + + VDIS +A+ Sbjct: 50 RPQTDTLL---LALAMRREGIGPGTDLLDLCTGSGALALHAARLG--ARVTAVDISRRAV 104 Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPR 193 A+ N + + D ++ G FD +VSNPPY+ + GL + P Sbjct: 105 ASARLNTALARLP--VTVRRGDLLRALPGRTFDAVVSNPPYVPAP-----GLALPRHGPG 157 Query: 194 ISLDGGIDGLSHYRTIADGVSRHLNKDGL 222 S D G DG I D L GL Sbjct: 158 RSWDAGPDGRVILDRICDDAFAALRPGGL 186 >gi|297202991|ref|ZP_06920388.1| methyltransferase type 12 [Streptomyces sviceus ATCC 29083] gi|197711984|gb|EDY56018.1| methyltransferase type 12 [Streptomyces sviceus ATCC 29083] Length = 492 Score = 43.9 bits (102), Expect = 0.026, Method: Compositional matrix adjust. Identities = 23/52 (44%), Positives = 31/52 (59%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 R+LDLG G G + ALLK+ F + VGVD+S +AL IA + + ER Sbjct: 299 AARVLDLGCGQGQLVQALLKDPKFTEIVGVDVSVRALTIASRRLKLDRMGER 350 >gi|186685653|ref|YP_001868849.1| methyltransferase type 12 [Nostoc punctiforme PCC 73102] gi|186468105|gb|ACC83906.1| Methyltransferase type 12 [Nostoc punctiforme PCC 73102] Length = 238 Score = 43.9 bits (102), Expect = 0.026, Method: Compositional matrix adjust. Identities = 27/81 (33%), Positives = 44/81 (54%), Gaps = 8/81 (9%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS--- 155 +RIL+LG GTG + L +LK P + + +D S + L+ A+ +G +R+ Q+ Sbjct: 43 LRILELGCGTGELSLKILKRFPNAQVIALDYSPRMLQFAQHKITASGYQKRWVGTQADFG 102 Query: 156 DWFSSVEGL-----FDVIVSN 171 DW ++ E L FD VS+ Sbjct: 103 DWANNPEKLDIGSEFDACVSS 123 >gi|307328253|ref|ZP_07607431.1| methyltransferase small [Streptomyces violaceusniger Tu 4113] gi|306886087|gb|EFN17095.1| methyltransferase small [Streptomyces violaceusniger Tu 4113] Length = 527 Score = 43.9 bits (102), Expect = 0.026, Method: Compositional matrix adjust. Identities = 39/135 (28%), Positives = 62/135 (45%), Gaps = 11/135 (8%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 V R+LDLGTG+G L + + + D + +AL IA+ +G E D + Sbjct: 177 VGRVLDLGTGSGIQALHAGRHA--TRVTATDRNPRALAIARLTLALSGAPEP-DLREGSL 233 Query: 158 FSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216 F V + +D+IVSNPP++ S G E+ + +GG+ G RT+ + H Sbjct: 234 FEPVRDETYDLIVSNPPFVISP-RSPEGSEL------VYREGGMSGDDLCRTLVQQSAGH 286 Query: 217 LNKDGLCSVEIGYNQ 231 L G C + + Sbjct: 287 LADGGWCQLLANWQH 301 >gi|302904823|ref|XP_003049144.1| hypothetical protein NECHADRAFT_62422 [Nectria haematococca mpVI 77-13-4] gi|256730079|gb|EEU43431.1| hypothetical protein NECHADRAFT_62422 [Nectria haematococca mpVI 77-13-4] Length = 329 Score = 43.9 bits (102), Expect = 0.026, Method: Compositional matrix adjust. Identities = 35/112 (31%), Positives = 45/112 (40%), Gaps = 13/112 (11%) Query: 59 DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118 D N RL L F L +D L F+ P V R+LDLGTGTG + E Sbjct: 56 DAENERLDLQHHIFY------LTLDGKLGFAPPNKPDAKVGRVLDLGTGTGIWAMDFGDE 109 Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170 P + +G+D+S + N V D +W S FD I S Sbjct: 110 HPEAEVIGIDLSPSQPQFVPPN-----VRFEIDDWDEEWTYSQP--FDYIHS 154 >gi|224038935|gb|ACN38364.1| putative sisomicin methyltransferase [Micromonospora inyonensis] Length = 320 Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust. Identities = 31/91 (34%), Positives = 47/91 (51%), Gaps = 5/91 (5%) Query: 95 KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154 +R R LD+G G+G + L L + +GVD++ +A+ +++ NA NG++ + Sbjct: 121 RRGGARALDMGCGSGVLSLVLADR--YESVLGVDVNPRAVALSRLNAALNGLTN-VTFRE 177 Query: 155 SDWFSSVEGLFDVIVSNPPYIE--SVIVDCL 183 D F EG F IV N P E S VD L Sbjct: 178 GDMFEPAEGRFSRIVFNSPTNEEGSEFVDLL 208 >gi|229823576|ref|ZP_04449645.1| hypothetical protein GCWU000282_00874 [Catonella morbi ATCC 51271] gi|229787020|gb|EEP23134.1| hypothetical protein GCWU000282_00874 [Catonella morbi ATCC 51271] Length = 250 Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust. Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 3/95 (3%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 VD+ L ++ +R RILDL +GTG + LL +++ +++A+ + Sbjct: 35 VDAILLAHFAKVPRRQTARILDLCSGTGVIPF-LLSAKTAGHIDAIELQEALVDMAQRSC 93 Query: 142 VTNGVSERFDTLQSD--WFSSVEGLFDVIVSNPPY 174 N +++R Q D + L+DV+ NPPY Sbjct: 94 QLNNLTDRLTFRQGDVKTMEAARPLYDVVTCNPPY 128 >gi|312139988|ref|YP_004007324.1| methyltransferase [Rhodococcus equi 103S] gi|325674537|ref|ZP_08154225.1| methyltransferase [Rhodococcus equi ATCC 33707] gi|311889327|emb|CBH48643.1| putative methyltransferase [Rhodococcus equi 103S] gi|325554797|gb|EGD24471.1| methyltransferase [Rhodococcus equi ATCC 33707] Length = 242 Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust. Identities = 46/156 (29%), Positives = 68/156 (43%), Gaps = 22/156 (14%) Query: 72 FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG--AVCLALLKESPFFKGVGVDI 129 + P+ +T LL + L + R+LD+G GTG +V AL VD+ Sbjct: 31 YPPQSDTYLLARTLLGEPI-----EPGTRVLDIGAGTGYLSVSAALAGSRNV---TAVDV 82 Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESV--IVDCLGLE 186 + +AL + NA NGV R + D + + E FD++VSNPPY+ + + GL Sbjct: 83 AKRALLNTRLNATLNGVQIR--AVHGDLTNPLGENNFDLVVSNPPYVPAADDTLPTGGLA 140 Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL 222 D G DG +H I R L G+ Sbjct: 141 R-------CWDAGRDGRAHLDRICREAPRILAPGGV 169 >gi|296104250|ref|YP_003614396.1| putative O-methyltransferase [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295058709|gb|ADF63447.1| putative O-methyltransferase [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 245 Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust. Identities = 27/81 (33%), Positives = 42/81 (51%), Gaps = 4/81 (4%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 V RILD+GTG+G + L L + + + V++ +A A NA+ + + R +D Sbjct: 45 VKRILDIGTGSGLLALMLAQRTDEHVTIDAVELDAQAAGQASENALESPWATRIKVECAD 104 Query: 157 ---WFSSVEGLFDVIVSNPPY 174 W +D+IVSNPPY Sbjct: 105 VLAWAPEQTARYDLIVSNPPY 125 >gi|291166621|gb|EFE28667.1| SAM-dependent methyltransferase [Filifactor alocis ATCC 35896] Length = 253 Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust. Identities = 24/79 (30%), Positives = 44/79 (55%), Gaps = 4/79 (5%) Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162 DLGTGTG + + +L +S K +I + ++A+ + + NG+ +R + SD + Sbjct: 54 DLGTGTGIIPILILGKSNLKKIYAFEIQEEVADMAQRSVLLNGLEDRATVICSDLKLANR 113 Query: 163 GL----FDVIVSNPPYIES 177 + D +VSNPPY+++ Sbjct: 114 HIEKCSLDFVVSNPPYMKT 132 >gi|262831172|sp|B2VI36|TRMN6_ERWT9 RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName: Full=tRNA m6A37 methyltransferase Length = 245 Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust. Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 4/81 (4%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 V R+LD+G+G+G + L L + + + V++ +A A+ N + + R Q+D Sbjct: 45 VKRVLDIGSGSGLIALMLAQRTSEPVQIDAVELDEEAATQAQENVAASPWAHRVHVQQAD 104 Query: 157 ---WFSSVEGLFDVIVSNPPY 174 W E + +IVSNPPY Sbjct: 105 VVEWAQRCEHSYSLIVSNPPY 125 >gi|157372654|ref|YP_001480643.1| 50S ribosomal protein L11 methyltransferase [Serratia proteamaculans 568] gi|166989900|sp|A8GK75|PRMA_SERP5 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11 Mtase gi|157324418|gb|ABV43515.1| ribosomal protein L11 methyltransferase [Serratia proteamaculans 568] Length = 293 Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust. Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 4/72 (5%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159 I+D G G+G + +A LK + +G+DI +A++ ++ NA NGVSER + L D Sbjct: 162 IIDFGCGSGILAIAALKLG-AARAIGIDIDPQAIQASRDNAQRNGVSERLELYLPKD--Q 218 Query: 160 SVEGLFDVIVSN 171 + L DV+V+N Sbjct: 219 PADLLADVVVAN 230 >gi|302883294|ref|XP_003040548.1| hypothetical protein NECHADRAFT_98109 [Nectria haematococca mpVI 77-13-4] gi|256721434|gb|EEU34835.1| hypothetical protein NECHADRAFT_98109 [Nectria haematococca mpVI 77-13-4] Length = 304 Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust. Identities = 28/79 (35%), Positives = 37/79 (46%), Gaps = 6/79 (7%) Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 N RL L + F L DS L+ S P + + R+LDLGTGTG + E P Sbjct: 60 NNRLDLQHNLFL------LTFDSKLSLSPPNLPEFKTGRVLDLGTGTGIWAIDFADEHPE 113 Query: 122 FKGVGVDISCKALEIAKSN 140 + +GVD+S E N Sbjct: 114 TEVIGVDLSPIQPEFVPPN 132 >gi|282852742|ref|ZP_06262084.1| methyltransferase small domain protein [Lactobacillus gasseri 224-1] gi|282556484|gb|EFB62104.1| methyltransferase small domain protein [Lactobacillus gasseri 224-1] Length = 171 Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust. Identities = 24/73 (32%), Positives = 44/73 (60%), Gaps = 1/73 (1%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 ILD+GTG G + L K P + VD++ +A+++AK NA N + + + +S+ + Sbjct: 60 ILDVGTGYGPMGLFAAKFWPDQEVDMVDVNERAIDLAKRNAQFNHI-DNVNIYESNIYEQ 118 Query: 161 VEGLFDVIVSNPP 173 V+ + +I++NPP Sbjct: 119 VDNKYGLIITNPP 131 >gi|237740004|ref|ZP_04570485.1| methyltransferase [Fusobacterium sp. 2_1_31] gi|229422021|gb|EEO37068.1| methyltransferase [Fusobacterium sp. 2_1_31] Length = 243 Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust. Identities = 25/83 (30%), Positives = 46/83 (55%), Gaps = 5/83 (6%) Query: 96 RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER----FD 151 ++ +ILD+GTG + L L K + K GV+I + ++A N N ++E+ +D Sbjct: 42 KNTKKILDIGTGNAVIPLFLSKRTSA-KIYGVEIQEISYQLALRNISINNLNEQIYIIYD 100 Query: 152 TLQSDWFSSVEGLFDVIVSNPPY 174 +++ G FD+++SNPP+ Sbjct: 101 NIKNYLKYFTVGSFDIVLSNPPF 123 >gi|219682246|ref|YP_002468630.1| 16S rRNA m(2)G 1207 methyltransferase [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|219621979|gb|ACL30135.1| 16S rRNA m(2)G 1207 methyltransferase [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] Length = 280 Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust. Identities = 29/93 (31%), Positives = 49/93 (52%), Gaps = 2/93 (2%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 +DS KR ++LD+G GTG + +LL SP VD + AL+ ++ Sbjct: 124 IDSGSKLLASTFSKRITGKVLDIGCGTGFLSASLLYFSPDAILTLVDNNMYALKCSQYTL 183 Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174 +N + + + S+ +S+V FD+I+SNPP+ Sbjct: 184 NSNKFNGK--IVYSNLYSNVFKKFDLIISNPPF 214 >gi|229824583|ref|ZP_04450652.1| hypothetical protein GCWU000282_01927 [Catonella morbi ATCC 51271] gi|229785954|gb|EEP22068.1| hypothetical protein GCWU000282_01927 [Catonella morbi ATCC 51271] Length = 203 Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust. Identities = 26/76 (34%), Positives = 43/76 (56%), Gaps = 4/76 (5%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL--QSDW 157 +I++LG+G G V +AL K P + GV+I+ +A ++A++N+ N V L W Sbjct: 63 QIVELGSGYGPVTIALAKLYPQAQVTGVEINERAYQLAQANSQLNRVENTAYQLADAGQW 122 Query: 158 FSSVEGLFDVIVSNPP 173 +S D +V+NPP Sbjct: 123 QASQAP--DFVVTNPP 136 >gi|224418991|ref|ZP_03656997.1| protoporphyrinogen oxidase [Helicobacter canadensis MIT 98-5491] gi|253827938|ref|ZP_04870823.1| protoporphyrinogen oxidase [Helicobacter canadensis MIT 98-5491] gi|313142503|ref|ZP_07804696.1| protoporphyrinogen oxidase [Helicobacter canadensis MIT 98-5491] gi|253511344|gb|EES90003.1| protoporphyrinogen oxidase [Helicobacter canadensis MIT 98-5491] gi|313131534|gb|EFR49151.1| protoporphyrinogen oxidase [Helicobacter canadensis MIT 98-5491] Length = 278 Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust. Identities = 54/204 (26%), Positives = 87/204 (42%), Gaps = 13/204 (6%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101 I R E I I+ FY + PRPETE+LVD A I + + I Sbjct: 61 IQRRKNLEPIEYIINKVSFYGKEFYVDRGVLIPRPETEILVDKARNI----ITQNNCKNI 116 Query: 102 LD--LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS--ERFDTLQSDW 157 + +G+G ++ LALL + DI +AL N +S + + + D+ Sbjct: 117 AEIGIGSGIISIMLALLLPNSNLNFYASDIIPEALFNTHVNLEKFKISNVKLYKSAFLDF 176 Query: 158 FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217 FD+++SNPPYI+ + L F+P+ +L GG G I + Sbjct: 177 NKKENITFDLLISNPPYIKKGEILPTPL---SFEPQKALFGGERGDEILHQIIKLAYENK 233 Query: 218 NKDGLCSVEIGYNQKVDVVRIFES 241 +C E+GYNQ+ + + ++ Sbjct: 234 IPHLIC--EMGYNQRESIENLMQN 255 >gi|119470498|ref|ZP_01613201.1| hypothetical protein ATW7_11806 [Alteromonadales bacterium TW-7] gi|119446199|gb|EAW27476.1| hypothetical protein ATW7_11806 [Alteromonadales bacterium TW-7] Length = 233 Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust. Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 6/77 (7%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN---GVSERFDTLQSDW 157 +LD+GTGTG + L + P V+I A A N + ++ + T+QS Sbjct: 39 LLDIGTGTGLLALMCKQRRPALSITAVEIDENAYNQALQNVANSPWPNIAIKHQTIQS-- 96 Query: 158 FSSVEGLFDVIVSNPPY 174 F+S + FDVI+SNPPY Sbjct: 97 FNS-DAPFDVIISNPPY 112 >gi|297160364|gb|ADI10076.1| methyltransferase small [Streptomyces bingchenggensis BCW-1] Length = 350 Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust. Identities = 38/130 (29%), Positives = 59/130 (45%), Gaps = 18/130 (13%) Query: 77 ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136 E L DS+LA+ D+GTGTG V A+L + V D +AL Sbjct: 165 EAPLPGDSSLAY--------------DIGTGTG-VLAAVLARRGVGRVVATDQDPRALAC 209 Query: 137 AKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL 196 A+ N G++ R D ++ D F G ++V NPP++ + + V D R+ L Sbjct: 210 ARENIARLGLAGRVDVVREDLFPG--GRAPLVVCNPPWVPARPTSPVEYAVYDPGGRM-L 266 Query: 197 DGGIDGLSHY 206 G +D L+ + Sbjct: 267 HGFLDSLAGH 276 >gi|289433610|ref|YP_003463482.1| hypothetical protein lse_0241 [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289169854|emb|CBH26392.1| conserved hypothetical protein [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 201 Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust. Identities = 33/116 (28%), Positives = 59/116 (50%), Gaps = 10/116 (8%) Query: 61 YNVRLTLSSDTFEPRP---ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117 +N++ T + F +++L++S FSL + + ILD+G G G + L + K Sbjct: 27 FNMQFTSDNGVFSKNTVDFGSQVLIES---FSLQEVSGK----ILDVGCGYGPMGLTVAK 79 Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173 E P + VD++ +ALE+A NA N ++ S + + + + I+SNPP Sbjct: 80 EFPESQVDMVDVNLRALELAGENAKLNQITNVRIYESSVYENVADEDYQAIISNPP 135 >gi|206900806|ref|YP_002250671.1| ribosomal protein L11 methyltransferase [Dictyoglomus thermophilum H-6-12] gi|226710073|sp|B5YDR3|PRMA_DICT6 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11 Mtase gi|206739909|gb|ACI18967.1| ribosomal protein L11 methyltransferase [Dictyoglomus thermophilum H-6-12] Length = 301 Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust. Identities = 26/71 (36%), Positives = 43/71 (60%), Gaps = 3/71 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LD+GTG+G + + + K+ K G+DI KA+E+AK NA N V F Q++ Sbjct: 169 VLDVGTGSGILSI-VAKKLGAGKVKGIDIDKKAVEVAKENAKRNNVELEFQ--QANLTIG 225 Query: 161 VEGLFDVIVSN 171 +E +D++V+N Sbjct: 226 IEDKYDIVVAN 236 >gi|153829160|ref|ZP_01981827.1| conserved hypothetical protein [Vibrio cholerae 623-39] gi|148875349|gb|EDL73484.1| conserved hypothetical protein [Vibrio cholerae 623-39] Length = 240 Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust. Identities = 27/80 (33%), Positives = 39/80 (48%), Gaps = 5/80 (6%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD---W 157 ILD+G GTG + L + P +DI A + A+ N + +ER + +D W Sbjct: 46 ILDIGCGTGLLSLMCAQRFPHAHITALDIEQSAYQAAEHNRQQSPWAERIECQHADILHW 105 Query: 158 FSSVEGLFDVIVSNPPYIES 177 S +G F I+ NPPY S Sbjct: 106 LPS-KG-FAAIICNPPYFNS 123 >gi|226364323|ref|YP_002782105.1| hypothetical protein ROP_49130 [Rhodococcus opacus B4] gi|226242812|dbj|BAH53160.1| hypothetical protein [Rhodococcus opacus B4] Length = 215 Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust. Identities = 37/104 (35%), Positives = 52/104 (50%), Gaps = 9/104 (8%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+LDL GTGA+ +A + VD+S +A + NA+ G R ++ D Sbjct: 32 RVLDLCAGTGALSVAAAAAG-AGRVTAVDVSRRAAISIRLNALARG--HRIRVIRGDLTE 88 Query: 160 SV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202 V E FDV+VSNPPY+ + VD V D P + D G +G Sbjct: 89 HVRENRFDVVVSNPPYVPAP-VDT----VPDRGPARAWDAGKNG 127 >gi|117164577|emb|CAJ88123.1| putative trans-aconitate methyltransferase [Streptomyces ambofaciens ATCC 23877] Length = 302 Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust. Identities = 23/57 (40%), Positives = 32/57 (56%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 RI+DLG GTG ALL P VD S L+ ++ A +G++ER T+Q+D Sbjct: 68 RIVDLGCGTGTGTFALLDRFPGAHVTAVDASAALLQHLRAKAGAHGLAERVRTVQAD 124 >gi|75907118|ref|YP_321414.1| UbiE/COQ5 methyltransferase [Anabaena variabilis ATCC 29413] gi|75700843|gb|ABA20519.1| UbiE/COQ5 methyltransferase [Anabaena variabilis ATCC 29413] Length = 220 Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust. Identities = 21/73 (28%), Positives = 43/73 (58%), Gaps = 2/73 (2%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE--RFDTLQSDWF 158 +LD GTGT + + + ++ P ++ V +D++ L+IA + +G+ E R + + + Sbjct: 46 VLDAGTGTARIPVLICQKRPRWQLVAIDMAENMLQIATQHVQQSGLQEHIRLELVDAKRL 105 Query: 159 SSVEGLFDVIVSN 171 +G+FD++VSN Sbjct: 106 PYEDGIFDLVVSN 118 >gi|307708536|ref|ZP_07645001.1| methyltransferase small domain superfamily [Streptococcus mitis NCTC 12261] gi|307615452|gb|EFN94660.1| methyltransferase small domain superfamily [Streptococcus mitis NCTC 12261] Length = 126 Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust. Identities = 21/47 (44%), Positives = 30/47 (63%), Gaps = 2/47 (4%) Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173 VDI+ +AL++A+ NA N V QS+ + VEG FD ++SNPP Sbjct: 16 VDINNRALDLARQNAERNKVEATI--FQSNIYEQVEGTFDHVISNPP 60 >gi|306822412|ref|ZP_07455790.1| 16S rRNA methyltransferase [Bifidobacterium dentium ATCC 27679] gi|304553957|gb|EFM41866.1| 16S rRNA methyltransferase [Bifidobacterium dentium ATCC 27679] Length = 219 Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust. Identities = 28/76 (36%), Positives = 39/76 (51%), Gaps = 10/76 (13%) Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV----SERFDTLQSDW 157 LDLG G G + L + ESP +D++ +ALE+ K NA NG+ + D + D Sbjct: 81 LDLGCGWGPIALTMAFESPKADVWALDVNERALELTKRNAEINGIGTIHAATADEIPHDL 140 Query: 158 FSSVEGLFDVIVSNPP 173 FD+I SNPP Sbjct: 141 ------TFDLIWSNPP 150 >gi|302562332|ref|ZP_07314674.1| methylase [Streptomyces griseoflavus Tu4000] gi|302479950|gb|EFL43043.1| methylase [Streptomyces griseoflavus Tu4000] Length = 223 Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust. Identities = 33/107 (30%), Positives = 55/107 (51%), Gaps = 10/107 (9%) Query: 72 FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131 + P+ +TELL + +P +LD+GTG + LA+ + VD+S Sbjct: 16 YAPQEDTELLAGALSDEPVP-----PDAAVLDVGTG--SGALAVAAARRGCRVTAVDVSW 68 Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIES 177 +A+ A+ NA+ GV R + D F V G FD++++NPPY+ + Sbjct: 69 RAVGTARLNALRAGVPVRVR--RGDLFGPVRGESFDLVLANPPYVPA 113 >gi|325177054|emb|CCA21009.1| dimethyladenosine transferase putative [Albugo laibachii Nc14] Length = 323 Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust. Identities = 35/91 (38%), Positives = 53/91 (58%), Gaps = 9/91 (9%) Query: 99 VRILDLGTGTGAVCLALLKESPFFK--GVGVDIS-CKALEIA-KSNAVTNGVS---ERFD 151 +R+L++G+GTG + ALL P + GV D S K+LE S T+ + R + Sbjct: 57 IRVLEIGSGTGNLTAALLDVDPTIQVHGVECDASMVKSLEDRFPSQLRTSQLQLHVNRIE 116 Query: 152 TLQ-SDWFSSVEGLFDVIVSNPPY-IESVIV 180 L+ SD FSS +GL D +V+N PY + S+I+ Sbjct: 117 KLRLSDLFSSSQGLIDAVVANIPYQLSSLII 147 >gi|46199805|ref|YP_005472.1| ubiquinone/menaquinone biosynthesis methyltransferase ubiE [Thermus thermophilus HB27] gi|61217295|sp|Q72HI4|UBIE_THET2 RecName: Full=Menaquinone biosynthesis methyltransferase ubiE gi|46197432|gb|AAS81845.1| ubiquinone/menaquinone biosynthesis methyltransferase ubiE [Thermus thermophilus HB27] Length = 220 Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust. Identities = 25/69 (36%), Positives = 35/69 (50%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 RILDL TGTG + L L + +P + VG D + L IA+ A G+ RF + Sbjct: 39 RILDLATGTGDLALMLKERAPGAEVVGADFAPPMLAIARRKAEARGLEVRFLEADALALP 98 Query: 160 SVEGLFDVI 168 +G FD + Sbjct: 99 FPDGAFDAV 107 >gi|312794827|ref|YP_004027749.1| methyltransferase [Burkholderia rhizoxinica HKI 454] gi|312166602|emb|CBW73605.1| Methyltransferase (EC 2.1.1.-) [Burkholderia rhizoxinica HKI 454] Length = 383 Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust. Identities = 30/104 (28%), Positives = 54/104 (51%), Gaps = 3/104 (2%) Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162 D+GTGTG + ALL + + D+ +AL+ A+ N G+S + + +++D F + Sbjct: 208 DIGTGTGVIA-ALLARRGVRRVIATDVDSRALDCARENVARLGLSAQVEVVRADLF-PLS 265 Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206 ++V NPP++ + + V D D R+ L G + GL + Sbjct: 266 RRAPLVVCNPPWVPARPSASIEHAVFDPDSRM-LRGFLAGLPAH 308 >gi|171742499|ref|ZP_02918306.1| hypothetical protein BIFDEN_01611 [Bifidobacterium dentium ATCC 27678] gi|171278113|gb|EDT45774.1| hypothetical protein BIFDEN_01611 [Bifidobacterium dentium ATCC 27678] Length = 216 Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust. Identities = 27/72 (37%), Positives = 39/72 (54%), Gaps = 2/72 (2%) Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 LDLG G G + L + ESP +D++ +ALE+ K NA NG+ + +D Sbjct: 78 LDLGCGWGPIALTMALESPKADVWALDVNERALELTKRNAEINGIG-TIHAVTADEIPH- 135 Query: 162 EGLFDVIVSNPP 173 + FD+I SNPP Sbjct: 136 DLTFDLIWSNPP 147 >gi|119719434|ref|YP_919929.1| methyltransferase small [Thermofilum pendens Hrk 5] gi|119524554|gb|ABL77926.1| methyltransferase [Thermofilum pendens Hrk 5] Length = 210 Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust. Identities = 41/115 (35%), Positives = 58/115 (50%), Gaps = 17/115 (14%) Query: 73 EPRPETEL---LVDSALAFSLPRIEK---RDVV--RILDLGTGTGAVCLALLKESPFFKG 124 P P+ EL S LA +L I + +D+ ++LDLG GTG + + + G Sbjct: 19 HPSPKIELEQYATPSTLAATLLWIAQEHFQDISGKKVLDLGCGTGRLGIG----AALLGG 74 Query: 125 VGV--DISCKALEIAKSNAVTNGVSERFDTLQSD--WFSSVEG-LFDVIVSNPPY 174 + V D+ A+ AKS A+ GV ER D L +D EG LFD +V NPP+ Sbjct: 75 IVVMLDLDFSAVSEAKSAAIRLGVYERVDLLVADVRLIPLREGILFDTVVENPPF 129 >gi|90413137|ref|ZP_01221133.1| hypothetical 16S RNA G1207 methylase RsmC [Photobacterium profundum 3TCK] gi|90325828|gb|EAS42280.1| hypothetical 16S RNA G1207 methylase RsmC [Photobacterium profundum 3TCK] Length = 339 Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust. Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 2/75 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LD G G G + + + P + DIS A+E AK N + +F +D +S Sbjct: 202 KVLDFGCGAGVLGAIMKAKHPRIELELCDISALAIESAKETFKVNQLDAKFTA--TDVYS 259 Query: 160 SVEGLFDVIVSNPPY 174 +EG ++ ++SNPP+ Sbjct: 260 ELEGPYNYLISNPPF 274 >gi|298368399|ref|ZP_06979717.1| methyltransferase domain protein [Neisseria sp. oral taxon 014 str. F0314] gi|298282402|gb|EFI23889.1| methyltransferase domain protein [Neisseria sp. oral taxon 014 str. F0314] Length = 335 Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust. Identities = 32/120 (26%), Positives = 55/120 (45%), Gaps = 14/120 (11%) Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 D+GTG+G + A+L + + +D + KA+ A +N G+ ++ D F Sbjct: 160 FDIGTGSGVIA-AILAKRGIPEITAIDTNPKAIACATANLARLGLDKQVAVQAVDLFP-- 216 Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221 EG D+IV NPP++ + +E +DP ++ +GV +HLN G Sbjct: 217 EGRADLIVCNPPWLPAKPTSA--VETALYDPDNAM---------LTAFLNGVRQHLNPQG 265 >gi|226289837|gb|EEH45321.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb18] Length = 333 Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust. Identities = 36/114 (31%), Positives = 59/114 (51%), Gaps = 21/114 (18%) Query: 76 PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG---VGVDISCK 132 PE + ++ F L + ILDLGTG G++ LALL++ F+ VGVD S K Sbjct: 101 PEKVMKFLTSECFPLAPCNTQSQPIILDLGTGNGSM-LALLRDEGGFEASRMVGVDYSPK 159 Query: 133 ALEIAK-------SNAVTNGVS----ERFDTLQS------DWFSSVEGLFDVIV 169 ++E+A+ + A ++ +S E +D + DWF + EG FD+++ Sbjct: 160 SIELARRLHDGSTTTAQSSDLSRIRFEVWDVFDNRPVQTLDWFPAAEGGFDIVL 213 >gi|116629036|ref|YP_814208.1| 16S RNA G1207 methylase RsmC [Lactobacillus gasseri ATCC 33323] gi|116094618|gb|ABJ59770.1| 16S rRNA m(2)G 1207 methyltransferase [Lactobacillus gasseri ATCC 33323] Length = 217 Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust. Identities = 24/73 (32%), Positives = 44/73 (60%), Gaps = 1/73 (1%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 ILD+GTG G + L K P + VD++ +A+++AK NA N + + + +S+ + Sbjct: 80 ILDVGTGYGPMGLFAAKFWPDQEVDMVDVNERAIDLAKRNAQFNHI-DNVNIYESNIYEQ 138 Query: 161 VEGLFDVIVSNPP 173 V+ + +I++NPP Sbjct: 139 VDNKYGLIITNPP 151 >gi|238789815|ref|ZP_04633597.1| Ribosomal protein L11 methyltransferase [Yersinia frederiksenii ATCC 33641] gi|238722174|gb|EEQ13832.1| Ribosomal protein L11 methyltransferase [Yersinia frederiksenii ATCC 33641] Length = 293 Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust. Identities = 39/120 (32%), Positives = 62/120 (51%), Gaps = 18/120 (15%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159 ++D G G+G + +A LK + +G+DI +A++ ++ NA NGVSER + L D + Sbjct: 162 VIDFGCGSGILAIAALKLG-ATRAIGIDIDPQAIQASRDNAQRNGVSERLELYLSKDQPA 220 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS---LDGGIDGLSH-YRTIADGVSR 215 + DV+V+N L +R+ P IS + GG GLS T A GV++ Sbjct: 221 DLSA--DVVVAN----------ILAGPLRELAPLISVLPVAGGYLGLSGVLATQAAGVAQ 268 >gi|332344450|gb|AEE57784.1| methyltransferase small domain protein [Escherichia coli UMNK88] Length = 245 Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust. Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 5/89 (5%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 V R LD+G G+G + L L + + + V++ +A A+ N + +ER + +D Sbjct: 45 VKRCLDIGAGSGLLALMLAQRTDDSVMIDAVELESEAAAQAQENINQSPWAERINVHTAD 104 Query: 157 ---WFSSVEGLFDVIVSNPPYIESVIVDC 182 W + FD+I+SNPPY E V+C Sbjct: 105 IQQWVTQQTARFDLIISNPPYYEQG-VEC 132 >gi|302525712|ref|ZP_07278054.1| rRNA/tRNA methylase [Streptomyces sp. AA4] gi|302434607|gb|EFL06423.1| rRNA/tRNA methylase [Streptomyces sp. AA4] Length = 507 Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust. Identities = 33/102 (32%), Positives = 50/102 (49%), Gaps = 6/102 (5%) Query: 76 PETELLVDSALAFSLPR-IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134 PE +L + SL R +R V +LDLGTG G L + + + D+S +AL Sbjct: 143 PEDHVLGVGHASLSLIRATSRRPVGTLLDLGTGNGVQALHATRHAQ--RVTATDVSARAL 200 Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYI 175 +A N + + L+ +WF+ V FD IV NPP++ Sbjct: 201 ALAAGTFRLNELE--VELLRGEWFAPVARRRFDQIVCNPPFV 240 >gi|300742198|ref|ZP_07072219.1| putative transferase [Rothia dentocariosa M567] gi|300381383|gb|EFJ77945.1| putative transferase [Rothia dentocariosa M567] Length = 575 Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust. Identities = 30/92 (32%), Positives = 42/92 (45%), Gaps = 12/92 (13%) Query: 94 EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153 E+ V R LD+GTG G LL + DIS +AL A+ N + N + + D Sbjct: 187 ERTPVARALDVGTGCGIQTFHLLAHADHV--TATDISPRALAFARFNLLLNAPALKLDPQ 244 Query: 154 ---------QSDWFSSVEG-LFDVIVSNPPYI 175 Q V G FD++VSNPP++ Sbjct: 245 NLEARVSLRQGSLLEPVAGEQFDLVVSNPPFV 276 >gi|331654038|ref|ZP_08355039.1| hypothetical protein ECJG_02346 [Escherichia coli M718] gi|331048887|gb|EGI20963.1| hypothetical protein ECJG_02346 [Escherichia coli M718] Length = 285 Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust. Identities = 26/84 (30%), Positives = 44/84 (52%), Gaps = 4/84 (4%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 V R LD+GTG+G + L L + + + V++ +A A+ N + +ER + +D Sbjct: 85 VKRCLDIGTGSGLLALMLAQRTDDSVMIDAVELESEAATQAQENINQSPWAERINVHTAD 144 Query: 157 ---WFSSVEGLFDVIVSNPPYIES 177 W + FD+I+SNPPY + Sbjct: 145 IQQWVTQQTARFDLIISNPPYYQQ 168 >gi|297580787|ref|ZP_06942713.1| conserved hypothetical protein [Vibrio cholerae RC385] gi|297535203|gb|EFH74038.1| conserved hypothetical protein [Vibrio cholerae RC385] Length = 240 Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust. Identities = 26/80 (32%), Positives = 37/80 (46%), Gaps = 5/80 (6%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD---W 157 ILD+G GTG + L + P +DI A + A+ N + +ER + +D W Sbjct: 46 ILDIGCGTGLLSLMCAQRFPHAHITALDIEQSAYQEAEHNRQQSPWAERIECQHADILHW 105 Query: 158 FSSVEGLFDVIVSNPPYIES 177 S F I+ NPPY S Sbjct: 106 LPSKR--FAAIICNPPYFNS 123 >gi|282898198|ref|ZP_06306189.1| conserved hypothetical protein (probable Methyltransferase activity) [Raphidiopsis brookii D9] gi|281196729|gb|EFA71634.1| conserved hypothetical protein (probable Methyltransferase activity) [Raphidiopsis brookii D9] Length = 393 Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust. Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 1/88 (1%) Query: 84 SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143 +A F R + +RILD G G+G L+ +P+ VG+DIS LE+A+ + Sbjct: 40 AAYNFCTGRKPSKQDIRILDAGCGSGVSTEYLVHLNPYSHVVGIDISPGTLEVARKRCQS 99 Query: 144 NGVSE-RFDTLQSDWFSSVEGLFDVIVS 170 +G + F L + G FD+I S Sbjct: 100 SGANRVEFHHLSIYDLDQIPGKFDLINS 127 >gi|237736938|ref|ZP_04567419.1| 16S rRNA m(2)G 1207 methyltransferase [Fusobacterium mortiferum ATCC 9817] gi|229420800|gb|EEO35847.1| 16S rRNA m(2)G 1207 methyltransferase [Fusobacterium mortiferum ATCC 9817] Length = 226 Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust. Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 1/78 (1%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LD+GTG G + + L ++ VG+DI + +A N N + E + + D Sbjct: 44 KVLDIGTGNGIIPILLYAKNKSRDIVGIDIQEENSSLAIRNIELNKLEEYIEIVNYDVKE 103 Query: 160 SVEG-LFDVIVSNPPYIE 176 G FD IVSNPPY++ Sbjct: 104 YPFGNSFDYIVSNPPYMK 121 >gi|115753806|ref|XP_001193617.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] gi|115928551|ref|XP_001183726.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] Length = 638 Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust. Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 8/85 (9%) Query: 89 SLPRIEKR--DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146 S+P+IE+R +RILDLG G G LA + P VG+D S +A+ K A G+ Sbjct: 441 SMPQIEERMKSGIRILDLGCGRGLASLAFAESYPNSTVVGLDFSEEAINYGKERAKEKGL 500 Query: 147 S------ERFDTLQSDWFSSVEGLF 165 + E + DW ++++ ++ Sbjct: 501 TNVEFIREDAACIPDDWNNTIDYIY 525 >gi|298491945|ref|YP_003722122.1| type 11 methyltransferase ['Nostoc azollae' 0708] gi|298233863|gb|ADI64999.1| Methyltransferase type 11 ['Nostoc azollae' 0708] Length = 395 Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust. Identities = 28/86 (32%), Positives = 42/86 (48%), Gaps = 1/86 (1%) Query: 84 SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143 +A F R ++ VRILD G G+G L+ +P + VG+D+S LE+AK + Sbjct: 40 AAYNFCTGRKPQKQDVRILDAGCGSGVSTEYLVHLNPHAQIVGIDLSAGTLEVAKKRCQS 99 Query: 144 NGVSE-RFDTLQSDWFSSVEGLFDVI 168 +G F L + G FD+I Sbjct: 100 SGADRVEFHHLSIYDVEQIPGKFDLI 125 >gi|217076536|ref|YP_002334252.1| ribosomal protein L11 methyltransferase [Thermosipho africanus TCF52B] gi|259534593|sp|B7IFP7|PRMA_THEAB RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11 Mtase gi|217036389|gb|ACJ74911.1| ribosomal protein L11 methyltransferase [Thermosipho africanus TCF52B] Length = 260 Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust. Identities = 36/98 (36%), Positives = 52/98 (53%), Gaps = 9/98 (9%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LDLG G+ A+ L K+ + +GVD A+E AK N N V + QSD FS+ Sbjct: 136 VLDLGCGS-AILSILAKKLGADRVLGVDNDPLAVEAAKENVERNNVD--VEIRQSDLFSN 192 Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG 198 V+G FD+IVSN +I + L ++D + DG Sbjct: 193 VDGKFDLIVSN------IIAEILIEALKDLPKFLKKDG 224 >gi|320170209|gb|EFW47108.1| predicted protein [Capsaspora owczarzaki ATCC 30864] Length = 347 Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust. Identities = 31/92 (33%), Positives = 48/92 (52%), Gaps = 7/92 (7%) Query: 85 ALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI----SCKALEIAKSN 140 ALA S PR + +V ++LD+G G+G +A+ + +P FKGV ++I C ALE Sbjct: 164 ALAAS-PRFKALNVTKLLDVGGGSGCFPIAMAQANPAFKGVVMEIDTVGKC-ALEFVAEA 221 Query: 141 AVTNGVSERFDTLQSD-WFSSVEGLFDVIVSN 171 V+ ++ + D W + EG V SN Sbjct: 222 KVSEQITTIARNMFKDAWPTPAEGFNGVFFSN 253 >gi|78043617|ref|YP_358926.1| hypothetical protein CHY_0054 [Carboxydothermus hydrogenoformans Z-2901] gi|77995732|gb|ABB14631.1| conserved hypothetical protein [Carboxydothermus hydrogenoformans Z-2901] Length = 249 Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust. Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 4/79 (5%) Query: 100 RILDLGTGTGAVCLALL-KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 R++DLGTG G V L L + K G++I K ++A + N + E+ + + D Sbjct: 50 RVVDLGTGNGVVPLLLYGRNREIGKIYGIEIQEKLYQLAVKSVALNNLEEKIEIILGDLK 109 Query: 159 SSVEGL---FDVIVSNPPY 174 + L FDV+ +NPPY Sbjct: 110 DAPAILGKGFDVVTANPPY 128 >gi|162420605|ref|YP_001605751.1| ribosomal protein L11 methyltransferase [Yersinia pestis Angola] gi|165937513|ref|ZP_02226076.1| ribosomal protein L11 methyltransferase [Yersinia pestis biovar Orientalis str. IP275] gi|270488616|ref|ZP_06205690.1| ribosomal protein L11 methyltransferase [Yersinia pestis KIM D27] gi|21956886|gb|AAM83806.1|AE013621_6 methylase for 50S ribosomal subunit protein L11 [Yersinia pestis KIM 10] gi|45438490|gb|AAS64036.1| ribosomal protein L11 methyltransferase [Yersinia pestis biovar Microtus str. 91001] gi|162353420|gb|ABX87368.1| ribosomal protein L11 methyltransferase [Yersinia pestis Angola] gi|165914618|gb|EDR33232.1| ribosomal protein L11 methyltransferase [Yersinia pestis biovar Orientalis str. IP275] gi|270337120|gb|EFA47897.1| ribosomal protein L11 methyltransferase [Yersinia pestis KIM D27] Length = 306 Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust. Identities = 40/120 (33%), Positives = 61/120 (50%), Gaps = 18/120 (15%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159 ++D G G+G + +A LK + +G+DI +A++ ++ NA NGVSER + L D Sbjct: 175 LIDFGCGSGILAIAALKLG-AARAIGIDIDPQAIQASRDNAQRNGVSERLELYLAKD--Q 231 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL---DGGIDGLSH-YRTIADGVSR 215 E DV+V+N L +R+ P IS+ GG GLS T A GV++ Sbjct: 232 PAELSADVVVAN----------ILAGPLRELAPLISVLPTTGGHLGLSGVLATQAAGVAQ 281 >gi|309750161|gb|ADO80145.1| Putative methyltransferase [Haemophilus influenzae R2866] Length = 240 Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust. Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 4/84 (4%) Query: 101 ILDLGTGTGAVCLALLK---ESPFFKGVGVD-ISCKALEIAKSNAVTNGVSERFDTLQSD 156 ILD+G+GTG + L L + E+ + V +D I+ K + +N+V + T Sbjct: 47 ILDMGSGTGLLALMLAQRTEENCQIQAVELDPIAAKQAQENINNSVWKNHIQLIQTDIQH 106 Query: 157 WFSSVEGLFDVIVSNPPYIESVIV 180 + + E FD+IV+NPPY E I Sbjct: 107 FLQTTEQTFDLIVANPPYFEQGIA 130 >gi|254467260|ref|ZP_05080671.1| methyltransferase small [Rhodobacterales bacterium Y4I] gi|206688168|gb|EDZ48650.1| methyltransferase small [Rhodobacterales bacterium Y4I] Length = 255 Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust. Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 6/81 (7%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +L+LG G G L L P GV++ ++A+ NA NG + D ++D + Sbjct: 49 VLELGCGAGQALLCLGARVPGLALAGVELQAPYADLARRNAAANG--QAIDVHEADLSAL 106 Query: 161 VEGL----FDVIVSNPPYIES 177 E L F +++NPPY ++ Sbjct: 107 PEALKLRQFHHVIANPPYYKA 127 >gi|150398939|ref|YP_001322706.1| methyltransferase small [Methanococcus vannielii SB] gi|150011642|gb|ABR54094.1| methyltransferase small [Methanococcus vannielii SB] Length = 198 Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust. Identities = 35/117 (29%), Positives = 62/117 (52%), Gaps = 17/117 (14%) Query: 64 RLTLSSDT--FEPRP---ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118 R + +D+ F P+ TE+LV+ L + DV LD+G G G V ++++ E Sbjct: 25 RFSFKTDSGVFSPKKIDKGTEILVNE-----LELLSSDDV---LDIGCGYGVVGISIVAE 76 Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSER-FDTLQSDWFSSVE-GLFDVIVSNPP 173 DI+ +++ +AK N N +S++ D +Q D + +V+ +D+I+SNPP Sbjct: 77 VNSI--TMTDINKRSVNLAKHNLKLNNISDKNIDVVQGDVYENVKCKNYDIIISNPP 131 >gi|111021800|ref|YP_704772.1| methyltransferase [Rhodococcus jostii RHA1] gi|110821330|gb|ABG96614.1| possible methyltransferase [Rhodococcus jostii RHA1] Length = 215 Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust. Identities = 42/134 (31%), Positives = 63/134 (47%), Gaps = 16/134 (11%) Query: 71 TFEPRPETELLVDSALAFSL-PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129 + P+ +T+LL D A L P R+LDL GTGA+ + + VD+ Sbjct: 8 VYRPQHDTQLLADVLAAEHLGPH------SRVLDLCAGTGALSVRAAAAG-AGRVTAVDV 60 Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVR 188 S +A + N++ G R + D V + FDV+VSNPPY+ ++I D V Sbjct: 61 SRRAAISIRLNSLVGG--HRIRVIHGDLVEQVRDERFDVVVSNPPYVPAMI-DA----VP 113 Query: 189 DFDPRISLDGGIDG 202 D P + D G +G Sbjct: 114 DRGPARAWDAGKNG 127 >gi|15612610|ref|NP_240913.1| hypothetical protein BH0047 [Bacillus halodurans C-125] gi|10172659|dbj|BAB03766.1| BH0047 [Bacillus halodurans C-125] Length = 246 Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust. Identities = 33/95 (34%), Positives = 48/95 (50%), Gaps = 8/95 (8%) Query: 93 IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152 I+K D ILDL TG G V L LL E + VGV+I + E+A N+ N + ++ Sbjct: 44 IQKGD---ILDLCTGNGIVPL-LLTERSKARMVGVEIQERLFEMAIRNSQLNDLEQQLTF 99 Query: 153 LQSDWFSSVEGL----FDVIVSNPPYIESVIVDCL 183 + D + + FDV+ NPPY ++ D L Sbjct: 100 MNLDLKDLPKNMPMHSFDVVTCNPPYFANLNEDLL 134 >gi|288957175|ref|YP_003447516.1| SAM-dependent methyltransferase [Azospirillum sp. B510] gi|288909483|dbj|BAI70972.1| SAM-dependent methyltransferase [Azospirillum sp. B510] Length = 403 Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust. Identities = 38/114 (33%), Positives = 57/114 (50%), Gaps = 17/114 (14%) Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPP-YIES 177 + VD S ALE A A NGV++RF+ ++D F +E L F V+V++PP +++S Sbjct: 255 IAVDRSALALENATRAAEANGVADRFEARKADAFQELERLNAAGETFQVVVADPPAFVKS 314 Query: 178 ---VIVDCLGL-EVRDFDPRISLDGGI---DGLSHY---RTIADGVSRHLNKDG 221 + V C ++ RI+ GG SH T A+ V+R LN G Sbjct: 315 KKDLAVGCRAYRKMARLAARITAPGGYLLCGSCSHNVDPPTFAEQVARGLNDAG 368 >gi|254508234|ref|ZP_05120358.1| SmtA protein [Vibrio parahaemolyticus 16] gi|219548851|gb|EED25852.1| SmtA protein [Vibrio parahaemolyticus 16] Length = 235 Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust. Identities = 26/78 (33%), Positives = 37/78 (47%), Gaps = 1/78 (1%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LD+GTGTG + L + P +DI A + A SN + +R Q D ++ Sbjct: 42 LLDIGTGTGLLALMCAQRKPTLTIDAIDIDQNACDAAISNFSNSPWQDRLTLHQGDILNA 101 Query: 161 -VEGLFDVIVSNPPYIES 177 FD I+ NPPY S Sbjct: 102 EFSHRFDAIICNPPYFNS 119 >gi|167768115|ref|ZP_02440168.1| hypothetical protein CLOSS21_02670 [Clostridium sp. SS2/1] gi|167709639|gb|EDS20218.1| hypothetical protein CLOSS21_02670 [Clostridium sp. SS2/1] gi|291559966|emb|CBL38766.1| Predicted O-methyltransferase [butyrate-producing bacterium SSC/2] Length = 244 Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust. Identities = 23/80 (28%), Positives = 42/80 (52%), Gaps = 4/80 (5%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+LDLGTGTG + + + ++ G++I + E+A + N + ++ + ++ D Sbjct: 43 RVLDLGTGTGILPILMEAKTKAVHLTGLEIQPEMAEMAARSVKLNHLEDKIEIVEGDIKE 102 Query: 160 S----VEGLFDVIVSNPPYI 175 + FD I SNPPY+ Sbjct: 103 ASAIFSHDSFDTITSNPPYM 122 >gi|290559022|gb|EFD92401.1| Methyltransferase type 11 [Candidatus Parvarchaeum acidophilus ARMAN-5] Length = 246 Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust. Identities = 32/77 (41%), Positives = 44/77 (57%), Gaps = 13/77 (16%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 RIL+LG G G V +AL KE GV G+DIS K + A NA + GV+ F + Sbjct: 53 RILELGCGAGQVSIALAKEG----GVCTGIDISEKQIAKAIKNAKSEGVNVNFVIMP--- 105 Query: 158 FSSVEGL----FDVIVS 170 FSS++ L FD+++S Sbjct: 106 FSSIKKLLKTKFDIVIS 122 >gi|224001076|ref|XP_002290210.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|220973632|gb|EED91962.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 242 Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust. Identities = 46/159 (28%), Positives = 73/159 (45%), Gaps = 36/159 (22%) Query: 40 NAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEK---- 95 +A + SLKH L RD+ +V +EP +T LL+D A+ + IE Sbjct: 5 SAEMPSLKH------LRMRDYDSV--------YEPSDDTYLLID-AIGMDIDAIEDDGDD 49 Query: 96 ------RDVVRILDLGTGTGA----VCLALLKESPFF--KGVGVDISCKALEIAKSNAVT 143 + + R L++G GTG + + LL + K DI+ A+ IA++ A Sbjct: 50 RNNDGIKRIKRTLEIGCGTGVPSVYLAMRLLAHGKDYDVKHFVTDINPDAIRIAQATADI 109 Query: 144 NGV-SERFDTLQSDWFSS----VEGLFDVIVSNPPYIES 177 N + S F +Q D S +E DV++ NPPY+ + Sbjct: 110 NNIPSADFHPIQCDLASQLLPEMENKIDVLIFNPPYVPT 148 >gi|238853614|ref|ZP_04643983.1| methyltransferase domain protein [Lactobacillus gasseri 202-4] gi|311111169|ref|ZP_07712566.1| 16S RNA methylase [Lactobacillus gasseri MV-22] gi|238833758|gb|EEQ26026.1| methyltransferase domain protein [Lactobacillus gasseri 202-4] gi|311066323|gb|EFQ46663.1| 16S RNA methylase [Lactobacillus gasseri MV-22] Length = 203 Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust. Identities = 24/73 (32%), Positives = 44/73 (60%), Gaps = 1/73 (1%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 ILD+GTG G + L K P + VD++ +A+++AK NA N + + + +S+ + Sbjct: 66 ILDVGTGYGPMGLFAAKFWPDQEVDMVDVNERAIDLAKRNAQFNHI-DNVNIYESNIYEQ 124 Query: 161 VEGLFDVIVSNPP 173 V+ + +I++NPP Sbjct: 125 VDNKYGLIITNPP 137 >gi|189425799|ref|YP_001952976.1| methyltransferase small [Geobacter lovleyi SZ] gi|189422058|gb|ACD96456.1| methyltransferase small [Geobacter lovleyi SZ] Length = 245 Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust. Identities = 26/78 (33%), Positives = 37/78 (47%), Gaps = 4/78 (5%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 I+DLGTG G + L L + + + A +A+ N NG++ER L D Sbjct: 47 IVDLGTGCGVMALVLARMAAAAHITAFEQDDAAASLARQNVGLNGLAERVTVLHDDVLQV 106 Query: 161 VEGL----FDVIVSNPPY 174 L D++VSNPPY Sbjct: 107 RRHLPVSSCDLVVSNPPY 124 >gi|326402390|ref|YP_004282471.1| ribosomal protein L11 methyltransferase [Acidiphilium multivorum AIU301] gi|325049251|dbj|BAJ79589.1| ribosomal protein L11 methyltransferase [Acidiphilium multivorum AIU301] Length = 305 Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust. Identities = 33/97 (34%), Positives = 49/97 (50%), Gaps = 19/97 (19%) Query: 80 LLVDSALAF-------------SLPRIEKRDVV-RILDLGTGTG--AVCLALLKESPFFK 123 +L+D+ LAF +L R+ KR RILDLGTG+G A+ A + P Sbjct: 123 VLLDAGLAFGTGEHGSTRGCLLALERLAKRRAPGRILDLGTGSGILAITAAKIWGKPVLA 182 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 DI +A+ +A +NA NGV+ + SD +S+ Sbjct: 183 ---TDIDQRAVRVASANAALNGVAPLLRVIGSDGWSA 216 >gi|254776010|ref|ZP_05217526.1| hypothetical protein MaviaA2_15260 [Mycobacterium avium subsp. avium ATCC 25291] Length = 250 Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust. Identities = 37/122 (30%), Positives = 51/122 (41%), Gaps = 19/122 (15%) Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRD------VVR-----------ILDLGTG 107 +T S D +P E+ D + LP D VVR +LD GTG Sbjct: 1 MTASFDPADPARFEEMYRDQRTSHGLPAATPWDIGGPQPVVRQLVALGAIKGEVLDPGTG 60 Query: 108 TGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDV 167 G A+ S F G+D S A+E A++NA GVS F+ + +G FD Sbjct: 61 PG--HHAIYYASQGFSATGIDGSAAAIERARANAHKAGVSVNFELADATKLDGFDGRFDT 118 Query: 168 IV 169 +V Sbjct: 119 VV 120 >gi|108809659|ref|YP_653575.1| ribosomal protein L11 methyltransferase [Yersinia pestis Antiqua] gi|108813676|ref|YP_649443.1| ribosomal protein L11 methyltransferase [Yersinia pestis Nepal516] gi|145597578|ref|YP_001161654.1| ribosomal protein L11 methyltransferase [Yersinia pestis Pestoides F] gi|165927551|ref|ZP_02223383.1| ribosomal protein L11 methyltransferase [Yersinia pestis biovar Orientalis str. F1991016] gi|166214163|ref|ZP_02240198.1| ribosomal protein L11 methyltransferase [Yersinia pestis biovar Antiqua str. B42003004] gi|167420502|ref|ZP_02312255.1| ribosomal protein L11 methyltransferase [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167425493|ref|ZP_02317246.1| ribosomal protein L11 methyltransferase [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167470297|ref|ZP_02335001.1| ribosomal protein L11 methyltransferase [Yersinia pestis FV-1] gi|108777324|gb|ABG19843.1| LSU ribosomal protein L11P methyltransferase [Yersinia pestis Nepal516] gi|108781572|gb|ABG15630.1| LSU ribosomal protein L11P methyltransferase [Yersinia pestis Antiqua] gi|145209274|gb|ABP38681.1| LSU ribosomal protein L11P methyltransferase [Yersinia pestis Pestoides F] gi|165920445|gb|EDR37722.1| ribosomal protein L11 methyltransferase [Yersinia pestis biovar Orientalis str. F1991016] gi|166204650|gb|EDR49130.1| ribosomal protein L11 methyltransferase [Yersinia pestis biovar Antiqua str. B42003004] gi|166961308|gb|EDR57329.1| ribosomal protein L11 methyltransferase [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167055507|gb|EDR65300.1| ribosomal protein L11 methyltransferase [Yersinia pestis biovar Mediaevalis str. K1973002] Length = 304 Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust. Identities = 40/120 (33%), Positives = 61/120 (50%), Gaps = 18/120 (15%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159 ++D G G+G + +A LK + +G+DI +A++ ++ NA NGVSER + L D Sbjct: 173 LIDFGCGSGILAIAALKLG-AARAIGIDIDPQAIQASRDNAQRNGVSERLELYLAKD--Q 229 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL---DGGIDGLSH-YRTIADGVSR 215 E DV+V+N L +R+ P IS+ GG GLS T A GV++ Sbjct: 230 PAELSADVVVAN----------ILAGPLRELAPLISVLPTTGGHLGLSGVLATQAAGVAQ 279 >gi|309777091|ref|ZP_07672057.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Erysipelotrichaceae bacterium 3_1_53] gi|308915161|gb|EFP60935.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Erysipelotrichaceae bacterium 3_1_53] Length = 441 Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust. Identities = 43/178 (24%), Positives = 88/178 (49%), Gaps = 29/178 (16%) Query: 17 LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRD------------FYNVR 64 + S Q+ + + V + + +I+ +L + + ILG ++ ++++ Sbjct: 204 VHSFQIPHEKEMVRELSEALPFVKSIIVNLNQRTDNVILGEKEKLLYGERVIVDSIHDLK 263 Query: 65 LTLSSDTF---EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 ++SS +F P+ +TE+L AL F+ ++ ++ V LDL G G + + L +++ Sbjct: 264 FSISSKSFYQVNPK-QTEVLYGKALEFA--QLTGKETV--LDLYCGVGTISMFLAQQARH 318 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPP 173 G++I +A++ A+ NA NG++ + + SD S + L DVIV +PP Sbjct: 319 V--TGIEIVPQAIQDARKNAALNGIA-NIEFVCSDAASYAKKLCEQGMHLDVIVVDPP 373 >gi|307324372|ref|ZP_07603580.1| Methyltransferase type 12 [Streptomyces violaceusniger Tu 4113] gi|306890103|gb|EFN21081.1| Methyltransferase type 12 [Streptomyces violaceusniger Tu 4113] Length = 267 Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust. Identities = 24/57 (42%), Positives = 33/57 (57%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 RILDLG+GTGA LALL+ + VD S + L+ + A GV +R +Q+D Sbjct: 34 RILDLGSGTGAGTLALLQRFEDTEATAVDRSPRLLDHIRGKARARGVEDRVRAVQAD 90 >gi|15790238|ref|NP_280062.1| hypothetical protein VNG1163G [Halobacterium sp. NRC-1] gi|169235967|ref|YP_001689167.1| protein N5-glutamine methyltransferase [Halobacterium salinarum R1] gi|10580698|gb|AAG19542.1| protoporphyrinogen oxidase [Halobacterium sp. NRC-1] gi|167727033|emb|CAP13819.1| protein N5-glutamine methyltransferase [Halobacterium salinarum R1] Length = 191 Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust. Identities = 49/191 (25%), Positives = 80/191 (41%), Gaps = 23/191 (12%) Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD-VVRILDLGTGTGAVCLALLKESPFF 122 R +D ++P +T LL +A+ E D R+LD+GTG+G V A +++ Sbjct: 7 RRGAGADVYQPAEDTHLLATAAVG------ELDDPYARVLDVGTGSGYVA-ATVRDETGA 59 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVD 181 VG D++ A+ A V ++ D + + FD +V NPPY+ Sbjct: 60 DVVGTDLNPFAVRQAADRGVP--------VVRGDLVAPFRDDAFDAVVFNPPYLPRED-- 109 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 + RD ++L GG G + D V R L DG+ + + VD V + Sbjct: 110 ----DTRDDWMDVALSGGDTGRRVIESFFDAVGRVLAPDGVVIMLVSTLTGVDEVAAYAG 165 Query: 242 RKLFLVNAFKD 252 + F A + Sbjct: 166 DRGFSAAAISE 176 >gi|84500215|ref|ZP_00998481.1| hypothetical protein OB2597_09744 [Oceanicola batsensis HTCC2597] gi|84392149|gb|EAQ04417.1| hypothetical protein OB2597_09744 [Oceanicola batsensis HTCC2597] Length = 257 Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust. Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 6/78 (7%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LDLG G GA L L + + G++ E+A+ NA+ NG++ F+ ++ D Sbjct: 46 VLDLGCGAGAASLCLGRRVAGLRLTGLERQPVYAELARRNAIENGLA--FEVVEGDLSDM 103 Query: 161 VEGL----FDVIVSNPPY 174 L FD +++NPPY Sbjct: 104 PTHLRQRSFDHVIANPPY 121 >gi|170767237|ref|ZP_02901690.1| putative methyltransferase [Escherichia albertii TW07627] gi|170123571|gb|EDS92502.1| putative methyltransferase [Escherichia albertii TW07627] Length = 245 Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust. Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 5/89 (5%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 V R LD+GTG+G + L L + + + V++ +A A+ N + + R + +D Sbjct: 45 VKRCLDIGTGSGLLALMLAQRTDDSVMIDAVELDSEAATQAQENVAQSPWAHRVNVHTAD 104 Query: 157 ---WFSSVEGLFDVIVSNPPYIESVIVDC 182 W S FD+I+SNPPY + V+C Sbjct: 105 IQQWISRQTTRFDLIISNPPYYQQG-VEC 132 >gi|77458323|ref|YP_347828.1| methyltransferase small [Pseudomonas fluorescens Pf0-1] gi|77382326|gb|ABA73839.1| Putative methyltransferase, small [Pseudomonas fluorescens Pf0-1] Length = 317 Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust. Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 1/76 (1%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R +D+G G G + + + + + VDI+ AL + NA V+ + SD Sbjct: 140 RAVDIGCGAGVGAILIGRARREAQVLAVDINPAALRLTTINAALAEVAN-VEVRASDVLQ 198 Query: 160 SVEGLFDVIVSNPPYI 175 V+G FD+IV+NPPY+ Sbjct: 199 GVDGEFDLIVANPPYM 214 >gi|225619645|ref|YP_002720902.1| Modification methylase [Brachyspira hyodysenteriae WA1] gi|225214464|gb|ACN83198.1| Modification methylase [Brachyspira hyodysenteriae WA1] Length = 406 Score = 43.5 bits (101), Expect = 0.033, Method: Compositional matrix adjust. Identities = 32/105 (30%), Positives = 52/105 (49%), Gaps = 7/105 (6%) Query: 72 FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131 F P+ +LL+ + S EK+D V+ILD G+G L+ + K G DI Sbjct: 28 FTPKSIRDLLLKELVYIS----EKKDNVKILDPACGSGEFLLSCNEYFKIPKLYGFDIDE 83 Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE 176 + I+K + N + D+L+ D S++ +D ++ NPPY E Sbjct: 84 SLVSISKK-LIKNADIKCLDSLKLDTKKSIK--YDYVIGNPPYFE 125 >gi|330507706|ref|YP_004384134.1| methylase [Methanosaeta concilii GP-6] gi|328928514|gb|AEB68316.1| methylase, putative [Methanosaeta concilii GP-6] Length = 167 Score = 43.5 bits (101), Expect = 0.033, Method: Compositional matrix adjust. Identities = 35/128 (27%), Positives = 56/128 (43%), Gaps = 15/128 (11%) Query: 94 EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153 E R +L++G G+G V L L ++ V +DI+ A+ + V + + Sbjct: 7 EARPEDHVLEVGCGSGLVSLELARQVESL--VALDINPHAVRATRERGV--------EVI 56 Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213 +SD F + G FD+I+ NPPY+ + E D +LDGG G + Sbjct: 57 RSDLFEGIRGKFDLIIFNPPYLPTKQA-----ERSDQWINYALDGGESGRETIGRFLLDL 111 Query: 214 SRHLNKDG 221 + HL G Sbjct: 112 AEHLRPGG 119 >gi|309802490|ref|ZP_07696596.1| methyltransferase small domain protein [Bifidobacterium dentium JCVIHMP022] gi|308220890|gb|EFO77196.1| methyltransferase small domain protein [Bifidobacterium dentium JCVIHMP022] Length = 216 Score = 43.5 bits (101), Expect = 0.033, Method: Compositional matrix adjust. Identities = 28/76 (36%), Positives = 39/76 (51%), Gaps = 10/76 (13%) Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV----SERFDTLQSDW 157 LDLG G G + L + ESP +D++ +ALE+ K NA NG+ + D + D Sbjct: 78 LDLGCGWGPIALTMAFESPKADVWALDVNERALELTKRNAEINGIGTIHAATADEIPHDL 137 Query: 158 FSSVEGLFDVIVSNPP 173 FD+I SNPP Sbjct: 138 ------TFDLIWSNPP 147 >gi|254410508|ref|ZP_05024287.1| methyltransferase, UbiE/COQ5 family [Microcoleus chthonoplastes PCC 7420] gi|196182714|gb|EDX77699.1| methyltransferase, UbiE/COQ5 family [Microcoleus chthonoplastes PCC 7420] Length = 258 Score = 43.5 bits (101), Expect = 0.033, Method: Compositional matrix adjust. Identities = 33/95 (34%), Positives = 48/95 (50%), Gaps = 7/95 (7%) Query: 83 DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142 D LA S+ R RILDLG GTG + +L+ + VGVD S + +E A + Sbjct: 45 DEMLA-SIARCIPSQAKRILDLGCGTGELSFKVLQRCRDVQVVGVDYSPRMIEFATTKLE 103 Query: 143 TNGVSERFDTLQ---SDWFS---SVEGLFDVIVSN 171 T G +++ ++ DW + SV G FD VS+ Sbjct: 104 TAGYRQQWTGIEGDFGDWANHQLSVGGGFDACVSS 138 >gi|119946653|ref|YP_944333.1| rRNA (guanine-N(2)-)-methyltransferase [Psychromonas ingrahamii 37] gi|226712969|sp|A1SZ19|RSMC_PSYIN RecName: Full=Ribosomal RNA small subunit methyltransferase C; AltName: Full=16S rRNA m2G1207 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rsmC gi|119865257|gb|ABM04734.1| 16S rRNA m(2)G 1207 methyltransferase [Psychromonas ingrahamii 37] Length = 349 Score = 43.5 bits (101), Expect = 0.033, Method: Compositional matrix adjust. Identities = 24/75 (32%), Positives = 42/75 (56%), Gaps = 2/75 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+LD G G G + +LK+ P VDI+ AL AK + +N + + S+ FS Sbjct: 210 RVLDFGCGAGVIACYVLKKHPQLSVDLVDINAFALASAKLSLQSNQLEG--NVFPSNVFS 267 Query: 160 SVEGLFDVIVSNPPY 174 ++ +++++SNPP+ Sbjct: 268 DIKEKYNILLSNPPF 282 >gi|320527675|ref|ZP_08028849.1| methyltransferase small domain protein [Solobacterium moorei F0204] gi|320131996|gb|EFW24552.1| methyltransferase small domain protein [Solobacterium moorei F0204] Length = 199 Score = 43.5 bits (101), Expect = 0.033, Method: Compositional matrix adjust. Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 2/74 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 RILD+G G G + + P + DI+ +A+E+A+ N N V TL SD ++ Sbjct: 60 RILDMGCGYGTLGIITKSLFPSSEVTMADINPRAVELAQLNCGLNQV--ECTTLVSDGYA 117 Query: 160 SVEGLFDVIVSNPP 173 +G + I++NPP Sbjct: 118 ETKGQYHFIITNPP 131 >gi|289209527|ref|YP_003461593.1| methyltransferase small [Thioalkalivibrio sp. K90mix] gi|288945158|gb|ADC72857.1| methyltransferase small [Thioalkalivibrio sp. K90mix] Length = 205 Score = 43.5 bits (101), Expect = 0.033, Method: Compositional matrix adjust. Identities = 37/134 (27%), Positives = 63/134 (47%), Gaps = 10/134 (7%) Query: 44 RSLKHESIHRILGWRDFY---NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR 100 R ++ + R L + D ++R + F PR +D L RIE R Sbjct: 11 RRIRQAELKRDLEFDDTLAGESLRFRTTWGLFSPR-----RIDDGTRMLLDRIEVRPSDD 65 Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 LDLG G G + L L +++P VD + A+E ++ NA NG++ + + S+ + Sbjct: 66 CLDLGCGYGPIGLTLARKAPQGITTLVDTNFLAVEYSRRNAELNGITN-VECVTSNGLAQ 124 Query: 161 V-EGLFDVIVSNPP 173 + + FD++ SN P Sbjct: 125 IRDRRFDLVASNLP 138 >gi|225850601|ref|YP_002730835.1| methyltransferase small [Persephonella marina EX-H1] gi|225646244|gb|ACO04430.1| methyltransferase small [Persephonella marina EX-H1] Length = 246 Score = 43.5 bits (101), Expect = 0.033, Method: Compositional matrix adjust. Identities = 29/101 (28%), Positives = 53/101 (52%), Gaps = 9/101 (8%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 +DS + S P I K+ +I+DLGTG+G + + L + P + ++I ++AK N Sbjct: 30 IDSVILSSFPEITKKKG-KIIDLGTGSGIILILLSLKYPDLEFHAIEIQEDLFDMAKRNF 88 Query: 142 VTNGVSERFDTLQSDWFSSVEGL-----FDVIVSNPPYIES 177 N V+ + ++ D ++ L FD +++NPPY + Sbjct: 89 ELNRVN--VNLIKGD-IKDIKKLYQPQYFDYVITNPPYFKK 126 >gi|149174999|ref|ZP_01853623.1| hypothetical protein PM8797T_11504 [Planctomyces maris DSM 8797] gi|148846336|gb|EDL60675.1| hypothetical protein PM8797T_11504 [Planctomyces maris DSM 8797] Length = 191 Score = 43.5 bits (101), Expect = 0.033, Method: Compositional matrix adjust. Identities = 31/78 (39%), Positives = 39/78 (50%), Gaps = 2/78 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF- 158 R+LDLG G G V + K V D+ A+ I+K NA N + LQSD F Sbjct: 44 RVLDLGCGCGVVGILAAKIVGAENVVMTDVDADAVRISKKNAERNAAAG-VTVLQSDGFR 102 Query: 159 SSVEGLFDVIVSNPPYIE 176 E F+ I+SNPPY E Sbjct: 103 DHQETDFEWILSNPPYHE 120 >gi|47096510|ref|ZP_00234101.1| conserved hypothetical protein [Listeria monocytogenes str. 1/2a F6854] gi|47015101|gb|EAL06043.1| conserved hypothetical protein [Listeria monocytogenes str. 1/2a F6854] Length = 204 Score = 43.5 bits (101), Expect = 0.033, Method: Compositional matrix adjust. Identities = 24/74 (32%), Positives = 40/74 (54%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 +ILD+G G G + L + K P + VD++ +A+E+AK NA N ++ S + + Sbjct: 65 KILDVGCGYGPMGLTVAKAFPDSQIEMVDVNLRAIELAKENAEINKITNTHIYESSVYDN 124 Query: 160 SVEGLFDVIVSNPP 173 + I+SNPP Sbjct: 125 VTANDYQAIISNPP 138 >gi|311112122|ref|YP_003983344.1| methyltransferase [Rothia dentocariosa ATCC 17931] gi|310943616|gb|ADP39910.1| methyltransferase [Rothia dentocariosa ATCC 17931] Length = 578 Score = 43.5 bits (101), Expect = 0.034, Method: Compositional matrix adjust. Identities = 30/92 (32%), Positives = 42/92 (45%), Gaps = 12/92 (13%) Query: 94 EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153 E+ V R LD+GTG G LL + DIS +AL A+ N + N + + D Sbjct: 190 ERTPVARALDVGTGCGIQTFHLLAHADHV--TATDISPRALAFARFNLLLNAPALKLDPQ 247 Query: 154 ---------QSDWFSSVEG-LFDVIVSNPPYI 175 Q V G FD++VSNPP++ Sbjct: 248 NLEARVSLRQGSLLDPVAGEQFDLVVSNPPFV 279 >gi|328880746|emb|CCA53985.1| hypothetical protein SVEN_0698 [Streptomyces venezuelae ATCC 10712] Length = 256 Score = 43.5 bits (101), Expect = 0.034, Method: Compositional matrix adjust. Identities = 21/69 (30%), Positives = 40/69 (57%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LD+G G G + L +L +P KG+G+DI+ + L ++ A T G+++R + ++ + Sbjct: 41 VLDIGCGWGELLLRILDAAPEAKGIGLDINAEDLARGRALAETRGLADRVEFVEESALGT 100 Query: 161 VEGLFDVIV 169 G D I+ Sbjct: 101 ERGPVDAIL 109 >gi|302873193|ref|YP_003841826.1| Methyltransferase type 11 [Clostridium cellulovorans 743B] gi|307688642|ref|ZP_07631088.1| Methyltransferase type 11 [Clostridium cellulovorans 743B] gi|302576050|gb|ADL50062.1| Methyltransferase type 11 [Clostridium cellulovorans 743B] Length = 253 Score = 43.1 bits (100), Expect = 0.034, Method: Compositional matrix adjust. Identities = 19/43 (44%), Positives = 27/43 (62%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142 +++DLGTGTG + L KE+P + VG+DI AL+ AV Sbjct: 48 KLMDLGTGTGYIAFTLAKENPNLQIVGLDIVTNALKANTEKAV 90 >gi|194290563|ref|YP_002006470.1| methyltransferase, methylase of polypeptide chain release factors [Cupriavidus taiwanensis LMG 19424] gi|193224398|emb|CAQ70409.1| putative methyltransferase, putative Methylase of polypeptide chain release factors [Cupriavidus taiwanensis LMG 19424] Length = 385 Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust. Identities = 30/104 (28%), Positives = 52/104 (50%), Gaps = 4/104 (3%) Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162 D+GTGTG V A+L + V D +AL A+ N G + + + +++D F + Sbjct: 212 DIGTGTG-VLAAVLARRGVHRVVATDQDARALACARENIARLGYAAQVEVIEADLFPA-- 268 Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206 G ++V NPP++ + + V D D + L G + GL+ + Sbjct: 269 GRAPLVVCNPPWVPARPSSPVERAVYDPDSTM-LRGFLQGLAEH 311 >gi|212224934|ref|YP_002308170.1| Hypothetical tRNA/rRNA methyltransferase [Thermococcus onnurineus NA1] gi|212009891|gb|ACJ17273.1| Hypothetical tRNA/rRNA methyltransferase [Thermococcus onnurineus NA1] Length = 396 Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust. Identities = 28/83 (33%), Positives = 47/83 (56%), Gaps = 11/83 (13%) Query: 99 VRILDLGTGTG--AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 +++LD+ T TG A+ A+ K V VD S +A+E+AK NA NGV++R + + Sbjct: 219 MKVLDVFTYTGGFAIHAAVAGAE---KVVAVDKSPRAIEMAKENAKLNGVADRMEFIVGS 275 Query: 157 WFSSVEGL------FDVIVSNPP 173 F +E + FD+++ +PP Sbjct: 276 AFPVMEEMIKRGEKFDIVILDPP 298 >gi|254415542|ref|ZP_05029302.1| Methyltransferase small domain superfamily [Microcoleus chthonoplastes PCC 7420] gi|196177723|gb|EDX72727.1| Methyltransferase small domain superfamily [Microcoleus chthonoplastes PCC 7420] Length = 217 Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust. Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 4/84 (4%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ--- 154 V ILD+GTGTG V L L + S V+I +A A+ N + +R Q Sbjct: 19 VQSILDIGTGTGLVALMLAQRSQAHID-AVEIDAEAGIQARENVAKSPWRDRIQVYQGSV 77 Query: 155 SDWFSSVEGLFDVIVSNPPYIESV 178 D+ ++ +D+IVSNPP+ ++ Sbjct: 78 QDYATTCSKRYDLIVSNPPFFDNA 101 >gi|119510422|ref|ZP_01629556.1| UbiE/COQ5 methyltransferase [Nodularia spumigena CCY9414] gi|119464951|gb|EAW45854.1| UbiE/COQ5 methyltransferase [Nodularia spumigena CCY9414] Length = 305 Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust. Identities = 38/142 (26%), Positives = 68/142 (47%), Gaps = 10/142 (7%) Query: 76 PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135 P E +V AL ++ +++ R RILDLG GTG+ L L + P + +G+D+S L Sbjct: 83 PPNETVVRQALIDAI-KVKPR---RILDLGCGTGSTTLKLKQAFPQAEVIGLDLSPYMLV 138 Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195 A+ A G+ ++ ++ + E FD++ ++ + E+ V C + F ++ Sbjct: 139 RAEDKARNAGLDIHWEHGNAETTNFPEAHFDLVTASLLFHETPSVVCQAVLRESFRLLVA 198 Query: 196 ------LDGGIDGLSHYRTIAD 211 LDG + L H + D Sbjct: 199 GGQVLILDGNQNTLRHLHWLND 220 >gi|113868957|ref|YP_727446.1| methylase of polypeptide chain release factors [Ralstonia eutropha H16] gi|113527733|emb|CAJ94078.1| methylase of polypeptide chain release factors [Ralstonia eutropha H16] Length = 387 Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust. Identities = 32/104 (30%), Positives = 51/104 (49%), Gaps = 4/104 (3%) Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162 D+GTGTG V A+L + V D +AL A+ N G + + +Q+D F E Sbjct: 214 DIGTGTG-VLAAVLARRGVQRVVATDQDPRALACARENIAQLGYAGEVEIVQADLFP--E 270 Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206 G ++V NPP++ + + V D D + L G + GL+ + Sbjct: 271 GRAPLVVCNPPWVPARPSSPVERAVYDPDSAM-LRGFLQGLAEH 313 >gi|262172262|ref|ZP_06039940.1| predicted O-methyltransferase [Vibrio mimicus MB-451] gi|261893338|gb|EEY39324.1| predicted O-methyltransferase [Vibrio mimicus MB-451] Length = 239 Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust. Identities = 38/149 (25%), Positives = 61/149 (40%), Gaps = 14/149 (9%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD---W 157 ILD+G GTG + L + + +DI A + K N+ + + R LQ+D W Sbjct: 46 ILDIGCGTGLLSLMCAQRFQSAQITALDIEPSAYQATKKNSENSPWANRIQCLQTDVRYW 105 Query: 158 FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217 + F I+ NPPY S G + F + G L H I + + + L Sbjct: 106 HPTQR--FSAIICNPPYFNS------GETAQQFARATARHTG--SLKHQELI-ECLPQLL 154 Query: 218 NKDGLCSVEIGYNQKVDVVRIFESRKLFL 246 DG+ S + + + + E L+L Sbjct: 155 ESDGVASFILPKTEGDQFIALAEQAGLYL 183 >gi|262037783|ref|ZP_06011225.1| methyltransferase [Leptotrichia goodfellowii F0264] gi|261748255|gb|EEY35652.1| methyltransferase [Leptotrichia goodfellowii F0264] Length = 243 Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust. Identities = 32/101 (31%), Positives = 50/101 (49%), Gaps = 12/101 (11%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 +D+ L +I R ++LD+GTG G + + LL E + VG+++ + +IA+ N Sbjct: 31 LDTVLLADFTKIN-RKTKKVLDIGTGCGIIPI-LLAEKSKAEIVGIELQKEMADIAERNV 88 Query: 142 VTNGVSERFDTLQSDW------FSSVEGLFDVIVSNPPYIE 176 ER + + D F E FD IV+NPPY E Sbjct: 89 --QNYEERINIINDDIKNYQKIFKKDE--FDCIVTNPPYFE 125 >gi|302191386|ref|ZP_07267640.1| hypothetical protein LineA_05182 [Lactobacillus iners AB-1] gi|309803952|ref|ZP_07698035.1| RNA methyltransferase, RsmD family [Lactobacillus iners LactinV 11V1-d] gi|309809287|ref|ZP_07703156.1| RNA methyltransferase, RsmD family [Lactobacillus iners SPIN 2503V10-D] gi|312871393|ref|ZP_07731488.1| RNA methyltransferase, RsmD family [Lactobacillus iners LEAF 3008A-a] gi|312872331|ref|ZP_07732401.1| RNA methyltransferase, RsmD family [Lactobacillus iners LEAF 2062A-h1] gi|312875499|ref|ZP_07735502.1| RNA methyltransferase, RsmD family [Lactobacillus iners LEAF 2053A-b] gi|315653469|ref|ZP_07906390.1| methyltransferase [Lactobacillus iners ATCC 55195] gi|308163954|gb|EFO66218.1| RNA methyltransferase, RsmD family [Lactobacillus iners LactinV 11V1-d] gi|308170400|gb|EFO72424.1| RNA methyltransferase, RsmD family [Lactobacillus iners SPIN 2503V10-D] gi|311089010|gb|EFQ47451.1| RNA methyltransferase, RsmD family [Lactobacillus iners LEAF 2053A-b] gi|311092154|gb|EFQ50528.1| RNA methyltransferase, RsmD family [Lactobacillus iners LEAF 2062A-h1] gi|311093046|gb|EFQ51395.1| RNA methyltransferase, RsmD family [Lactobacillus iners LEAF 3008A-a] gi|315489160|gb|EFU78801.1| methyltransferase [Lactobacillus iners ATCC 55195] Length = 182 Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust. Identities = 27/92 (29%), Positives = 46/92 (50%), Gaps = 7/92 (7%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+LDL G+GA+ L + + V VDI+ A EI K N + ERF+ ++ Sbjct: 44 RVLDLYAGSGALGLEAVSRG-YDSAVFVDINYAACEIIKKNILLTKEKERFEIFKNSDLR 102 Query: 160 SVEGL------FDVIVSNPPYIESVIVDCLGL 185 ++ L FD++ +PPY + I+ + + Sbjct: 103 AISILASRNYHFDLVFLDPPYAKEKIIKVMKI 134 >gi|288559415|ref|YP_003422901.1| SAM-dependent methyltransferase HemK-related protein [Methanobrevibacter ruminantium M1] gi|288542125|gb|ADC46009.1| SAM-dependent methyltransferase HemK-related protein [Methanobrevibacter ruminantium M1] Length = 194 Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust. Identities = 40/138 (28%), Positives = 68/138 (49%), Gaps = 15/138 (10%) Query: 92 RIEKRDVVRILDLGTGTGAVCL--ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE- 148 +E ++ +L++GTG+G V + +LL + DI+ ALE+A+ N N ++ Sbjct: 25 NLEIKEGQSVLEIGTGSGLVSMYASLLTDDV----TATDINYNALELAEKNFKLNDINTI 80 Query: 149 RFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207 R + D F V+ FDVI+ N PY+ + D + ++ + DGGIDG Sbjct: 81 RLEF--GDLFEPVKNEKFDVILFNTPYLPTDTDDIIDDDLN-----YAFDGGIDGRKVID 133 Query: 208 TIADGVSRHLNKDGLCSV 225 + VS +LN G+ + Sbjct: 134 RFINEVSHYLNDGGIVQI 151 >gi|241896317|ref|ZP_04783613.1| methyltransferase [Weissella paramesenteroides ATCC 33313] gi|241870297|gb|EER74048.1| methyltransferase [Weissella paramesenteroides ATCC 33313] Length = 262 Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust. Identities = 28/91 (30%), Positives = 50/91 (54%), Gaps = 7/91 (7%) Query: 88 FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147 F+ PR R + +DLG G GAV L + + VGV+I + ++A+ + + N ++ Sbjct: 48 FAEPRKNGRGLT--VDLGAGNGAVSL-FMAHKVSGQIVGVEIQERLADMAQRSVMMNDLT 104 Query: 148 ERFDTLQSDW---FSSVE-GLFDVIVSNPPY 174 ++ + +D F+ + G D++VSNPPY Sbjct: 105 DKIRIMNADMRDIFNDIRPGSADMVVSNPPY 135 >gi|254787289|ref|YP_003074718.1| RNA methyltransferase [Teredinibacter turnerae T7901] gi|237685081|gb|ACR12345.1| putative RNA methyltransferase [Teredinibacter turnerae T7901] Length = 399 Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust. Identities = 21/53 (39%), Positives = 32/53 (60%), Gaps = 6/53 (11%) Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPP 173 D S +AL+IA+ NA G +RF L+ D F+S++ L FDV++ +PP Sbjct: 251 ADASARALDIAQKNAQLQGGGDRFTALEGDAFASLKALKENDERFDVVIVDPP 303 >gi|195470849|ref|XP_002087719.1| GE15042 [Drosophila yakuba] gi|194173820|gb|EDW87431.1| GE15042 [Drosophila yakuba] Length = 224 Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust. Identities = 35/122 (28%), Positives = 62/122 (50%), Gaps = 8/122 (6%) Query: 72 FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE-SPFFKGVGVDIS 130 +EP ++ LL+D AL L +++ ++LG+G+G + AL K+ + F + DI+ Sbjct: 18 YEPAEDSFLLLD-ALEKDLEYLDQLQPRLCVELGSGSGVIITALAKKLAGFSLCLATDIN 76 Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRD 189 KA + A NG R D+++ ++ DV++ NPPY V+ L+ + Sbjct: 77 PKACNATRRTATRNGA--RLDSIRCSLADALRSQSVDVLLFNPPY---VVTSDAELQTQQ 131 Query: 190 FD 191 FD Sbjct: 132 FD 133 >gi|194098667|ref|YP_002001729.1| hypothetical protein NGK_1104 [Neisseria gonorrhoeae NCCP11945] gi|254493768|ref|ZP_05106939.1| methyltransferase [Neisseria gonorrhoeae 1291] gi|268599042|ref|ZP_06133209.1| methyltransferase [Neisseria gonorrhoeae MS11] gi|268601395|ref|ZP_06135562.1| methyltransferase [Neisseria gonorrhoeae PID18] gi|268686667|ref|ZP_06153529.1| methyltransferase [Neisseria gonorrhoeae SK-93-1035] gi|291043772|ref|ZP_06569488.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2] gi|193933957|gb|ACF29781.1| Conserved hypothetical protein [Neisseria gonorrhoeae NCCP11945] gi|226512808|gb|EEH62153.1| methyltransferase [Neisseria gonorrhoeae 1291] gi|268583173|gb|EEZ47849.1| methyltransferase [Neisseria gonorrhoeae MS11] gi|268585526|gb|EEZ50202.1| methyltransferase [Neisseria gonorrhoeae PID18] gi|268626951|gb|EEZ59351.1| methyltransferase [Neisseria gonorrhoeae SK-93-1035] gi|291012235|gb|EFE04224.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2] Length = 135 Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust. Identities = 27/95 (28%), Positives = 50/95 (52%), Gaps = 5/95 (5%) Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 D+GTG+G V A+L + +G D + +A+ A++N G ++ + ++D F Sbjct: 35 FDIGTGSG-VLAAILAKQGIPSVIGTDTNPRAVACARANIARLGFEKQVEIRETDLFP-- 91 Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL 196 EG D+IV NPP++ + +E +DP ++ Sbjct: 92 EGFADLIVCNPPWLPAKPTSA--VESALYDPESAM 124 >gi|145628789|ref|ZP_01784589.1| hypothetical protein CGSHi22121_07225 [Haemophilus influenzae 22.1-21] gi|145638667|ref|ZP_01794276.1| phosphatidylserine synthase [Haemophilus influenzae PittII] gi|144979259|gb|EDJ88945.1| hypothetical protein CGSHi22121_07225 [Haemophilus influenzae 22.1-21] gi|145272262|gb|EDK12170.1| phosphatidylserine synthase [Haemophilus influenzae PittII] Length = 232 Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust. Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 4/84 (4%) Query: 101 ILDLGTGTGAVCLALLK---ESPFFKGVGVD-ISCKALEIAKSNAVTNGVSERFDTLQSD 156 ILD+G+GTG + L L + E+ + V +D I+ K + +N+V + T Sbjct: 39 ILDMGSGTGLLALMLAQRTEENCQIQAVELDPIAAKQAQENINNSVWKNHIQLIQTDIQH 98 Query: 157 WFSSVEGLFDVIVSNPPYIESVIV 180 + + E FD+IV+NPPY E I Sbjct: 99 FLQTTEQTFDLIVANPPYFEQGIA 122 >gi|256845193|ref|ZP_05550651.1| 16S rRNA m(2)G 1207 methyltransferase [Fusobacterium sp. 3_1_36A2] gi|256718752|gb|EEU32307.1| 16S rRNA m(2)G 1207 methyltransferase [Fusobacterium sp. 3_1_36A2] Length = 223 Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust. Identities = 30/99 (30%), Positives = 56/99 (56%), Gaps = 8/99 (8%) Query: 83 DSALAFSL--PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG-VGVDISCKALEIAKS 139 D+ L F L + K+++ ++LD+GTG G + + LL ++ F VG+DI + ++ A Sbjct: 29 DTILLFKLFQASLNKKNI-KLLDIGTGNGILPI-LLSDNEFLSELVGIDIQKENIDRANM 86 Query: 140 NAVTNGVSE--RFDTLQSDWFSSVEGLFDVIVSNPPYIE 176 N + + +F+ + + + FDVI+SNPPY++ Sbjct: 87 ALELNKIEKNIQFECMDIREYK-ISNYFDVIISNPPYMD 124 >gi|226506076|ref|NP_001150241.1| LOC100283871 [Zea mays] gi|195637752|gb|ACG38344.1| hemK methyltransferase family member 2 [Zea mays] Length = 278 Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust. Identities = 51/211 (24%), Positives = 94/211 (44%), Gaps = 40/211 (18%) Query: 70 DTFEPRPETELLVDSALA--FSLPRIEKRDVVRILDLGTGTGAV----CLALLKESPFFK 123 D +EP ++ LVD+ L+ L ++ R +++G+G+G V + L + + Sbjct: 49 DVYEPCDDSFALVDALLSDKAQLLTLQPR---LCMEVGSGSGYVITSLAIMLRQLGSGAQ 105 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIESVI 179 + DI+ A E ++ +GV D + +D S ++ G+ DV V NPPY+ + + Sbjct: 106 YLATDINQHAAETTQATLEAHGV--HADVIVTDIMSGLDKRLAGMVDVAVVNPPYVPTPV 163 Query: 180 --VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG--------------LC 223 V C G+ S GG++G I V L++ G +C Sbjct: 164 EEVGCRGIAS-------SWAGGLNGRQVIDRILPAVREMLSERGWLYMVALEDNDPSDIC 216 Query: 224 SV--EIGYNQKVDVVRIFESRKLFLVNAFKD 252 + E+GY +V + R E L+++ ++D Sbjct: 217 HLMSEMGYASRVILKRCTEEESLYVLKFWRD 247 >gi|226530570|ref|NP_001141264.1| hypothetical protein LOC100273353 [Zea mays] gi|194703640|gb|ACF85904.1| unknown [Zea mays] Length = 278 Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust. Identities = 51/211 (24%), Positives = 94/211 (44%), Gaps = 40/211 (18%) Query: 70 DTFEPRPETELLVDSALA--FSLPRIEKRDVVRILDLGTGTGAV----CLALLKESPFFK 123 D +EP ++ LVD+ L+ L ++ R +++G+G+G V + L + + Sbjct: 49 DVYEPCDDSFALVDALLSDKAQLLTLQPR---LCMEVGSGSGYVITSLAIMLRQLGSGAQ 105 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIESVI 179 + DI+ A E ++ +GV D + +D S ++ G+ DV V NPPY+ + + Sbjct: 106 YLATDINQHAAETTQATLEAHGV--HADVIVTDIMSGLDKRLAGMVDVAVVNPPYVPTPV 163 Query: 180 --VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG--------------LC 223 V C G+ S GG++G I V L++ G +C Sbjct: 164 EEVGCRGIAS-------SWAGGLNGRQVIDRILPAVREMLSERGWLYMVALEDNDPSDIC 216 Query: 224 SV--EIGYNQKVDVVRIFESRKLFLVNAFKD 252 + E+GY +V + R E L+++ ++D Sbjct: 217 HLMSEMGYASRVILKRCTEEESLYVLKFWRD 247 >gi|297618846|ref|YP_003706951.1| type I restriction-modification system, M subunit [Methanococcus voltae A3] gi|297377823|gb|ADI35978.1| type I restriction-modification system, M subunit [Methanococcus voltae A3] Length = 514 Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust. Identities = 25/87 (28%), Positives = 47/87 (54%), Gaps = 4/87 (4%) Query: 95 KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS-ERFDTL 153 K+D+ + D G+G++ L + KE+ K G ++ +A+ N + + VS ++FD Sbjct: 222 KKDLKSVYDPTCGSGSLLLRISKEADVRKFYGQEVISTTYNLARMNMLLHNVSYDKFDIQ 281 Query: 154 QSDWFSSVEGL---FDVIVSNPPYIES 177 D + + L FD +V+NPPY ++ Sbjct: 282 NDDVLENPKHLGKKFDAVVANPPYSQT 308 >gi|242037567|ref|XP_002466178.1| hypothetical protein SORBIDRAFT_01g002920 [Sorghum bicolor] gi|241920032|gb|EER93176.1| hypothetical protein SORBIDRAFT_01g002920 [Sorghum bicolor] Length = 280 Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust. Identities = 51/211 (24%), Positives = 94/211 (44%), Gaps = 40/211 (18%) Query: 70 DTFEPRPETELLVDSALA--FSLPRIEKRDVVRILDLGTGTGAV----CLALLKESPFFK 123 D +EP ++ LVD+ L+ L ++ R +++G+G+G V + L + + Sbjct: 51 DVYEPCDDSFALVDALLSDKAQLLTLQPR---LCMEVGSGSGYVITSLAIMLRQLGSGAQ 107 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIESVI 179 + DI+ A E ++ +GV D + +D S ++ G+ DV V NPPY+ + + Sbjct: 108 YLATDINQHAAETTQATLEAHGV--HADVIVTDIVSGLDKRLAGMVDVAVVNPPYVPTPV 165 Query: 180 --VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG--------------LC 223 V C G+ S GG++G I V L++ G +C Sbjct: 166 EEVGCKGIAS-------SWAGGLNGRQVIDRILPAVREMLSERGWLYMVALEDNDPSDIC 218 Query: 224 SV--EIGYNQKVDVVRIFESRKLFLVNAFKD 252 + E+GY +V + R E L+++ ++D Sbjct: 219 HLMSEMGYASRVVLKRCTEEESLYVLKFWRD 249 >gi|256394651|ref|YP_003116215.1| methyltransferase type 12 [Catenulispora acidiphila DSM 44928] gi|256360877|gb|ACU74374.1| Methyltransferase type 12 [Catenulispora acidiphila DSM 44928] Length = 511 Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust. Identities = 20/45 (44%), Positives = 31/45 (68%) Query: 93 IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137 + + + R+LDLG G GA+ LLK+ F + VG+D+S +AL+IA Sbjct: 296 LHEAEASRVLDLGCGEGALLRDLLKDKAFTEVVGIDVSARALQIA 340 >gi|205353685|ref|YP_002227486.1| hypothetical protein SG2626 [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207857996|ref|YP_002244647.1| hypothetical protein SEN2569 [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|262828602|sp|B5QTV6|TRMN6_SALEP RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName: Full=tRNA m6A37 methyltransferase gi|262828609|sp|B5RD57|TRMN6_SALG2 RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName: Full=tRNA m6A37 methyltransferase gi|205273466|emb|CAR38443.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|206709799|emb|CAR34151.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|320085537|emb|CBY95316.1| Uncharacterized adenine-specific methylase PM0390 [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|326628789|gb|EGE35132.1| Methyltransferase small [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 245 Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust. Identities = 30/85 (35%), Positives = 43/85 (50%), Gaps = 6/85 (7%) Query: 97 DVVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERF----D 151 DV RILD+GTG+G + L L + + + V++ A A+ N + R D Sbjct: 44 DVKRILDIGTGSGLLALMLAQRTDDNVPIDAVELDAGAAMQAQENVAHSPWPHRITVHTD 103 Query: 152 TLQSDWFSSVEGLFDVIVSNPPYIE 176 +QS W FD+I+SNPPY E Sbjct: 104 DIQS-WAPRQTVRFDLIISNPPYYE 127 >gi|37527224|ref|NP_930568.1| hypothetical protein plu3348 [Photorhabdus luminescens subsp. laumondii TTO1] gi|81833921|sp|Q7N1W7|TRMN6_PHOLL RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName: Full=tRNA m6A37 methyltransferase gi|36786658|emb|CAE15722.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii TTO1] Length = 244 Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust. Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 4/88 (4%) Query: 97 DVVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQS 155 D ILD+G G+G + L L + + + V++ +A A+ NA + + D Q Sbjct: 43 DKKAILDIGCGSGLIALMLAQRTDENTKIDAVELDTEAALQAQDNAEQSPWQRKIDVYQQ 102 Query: 156 D---WFSSVEGLFDVIVSNPPYIESVIV 180 D + +D+IVSNPPY E + Sbjct: 103 DIGDFAEQYSQCYDLIVSNPPYFEPAVA 130 >gi|302529500|ref|ZP_07281842.1| ElmF protein [Streptomyces sp. AA4] gi|302438395|gb|EFL10211.1| ElmF protein [Streptomyces sp. AA4] Length = 376 Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust. Identities = 34/109 (31%), Positives = 57/109 (52%), Gaps = 5/109 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 + DLGTGTG V A+L + V D++ A+ A+ N G+S+R ++D + S Sbjct: 198 VFDLGTGTG-VLAAILARRGAAEVVATDLNPLAVRCARDNLRRLGLSDRVQVRETDLWPS 256 Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS-LDGGIDGLSHYRT 208 + D++V NPP++ L L + +DP + L+ +DGL + T Sbjct: 257 -DRRADLVVCNPPWLPGNPSSALELGI--YDPSSAMLNRFLDGLPGHLT 302 >gi|266620882|ref|ZP_06113817.1| putative N-6 adenine-specific DNA methylase [Clostridium hathewayi DSM 13479] gi|288867462|gb|EFC99760.1| putative N-6 adenine-specific DNA methylase [Clostridium hathewayi DSM 13479] Length = 245 Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust. Identities = 31/118 (26%), Positives = 56/118 (47%), Gaps = 10/118 (8%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 +D+ L R+++ + + +DLGTGTG + + L + G++I + ++A + Sbjct: 32 MDAVLLSGFARVKQGE--KAIDLGTGTGIIPILLEAKYEGEHYTGLEIQDEMADMAARSV 89 Query: 142 VTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195 N + E+ ++ D + FDV+ SNPPY+ D GL+ D IS Sbjct: 90 ALNHLEEKVSIVKGDIKEASRLFGAASFDVVTSNPPYMN----DAHGLKNPDLPKAIS 143 >gi|15606087|ref|NP_213464.1| hypothetical protein aq_674 [Aquifex aeolicus VF5] gi|2983274|gb|AAC06868.1| hypothetical protein aq_674 [Aquifex aeolicus VF5] Length = 239 Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust. Identities = 33/108 (30%), Positives = 57/108 (52%), Gaps = 9/108 (8%) Query: 72 FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131 F+P+ E ++ VD L S + KR+ RI+DLG G G + + L K+ K V + Sbjct: 20 FQPK-EHKISVDLVLFLSKIKPPKRNY-RIIDLGAGFGFLSITLAKKYG-VKVVAFEYDE 76 Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFSSVE-----GLFDVIVSNPPY 174 + +++ + N NGV + ++ D +E G F+++VSNPP+ Sbjct: 77 RMVKLLRKNVKLNGVEHLVEVVEGD-IKEIEKHLSRGSFNLVVSNPPF 123 >gi|168748353|ref|ZP_02773375.1| putative methyltransferase [Escherichia coli O157:H7 str. EC4113] gi|168757761|ref|ZP_02782768.1| putative methyltransferase [Escherichia coli O157:H7 str. EC4401] gi|168768680|ref|ZP_02793687.1| putative methyltransferase [Escherichia coli O157:H7 str. EC4486] gi|168778554|ref|ZP_02803561.1| putative methyltransferase [Escherichia coli O157:H7 str. EC4076] gi|168801695|ref|ZP_02826702.1| putative methyltransferase [Escherichia coli O157:H7 str. EC508] gi|195936723|ref|ZP_03082105.1| hypothetical protein EscherichcoliO157_09715 [Escherichia coli O157:H7 str. EC4024] gi|208812457|ref|ZP_03253786.1| putative methyltransferase [Escherichia coli O157:H7 str. EC4045] gi|208821308|ref|ZP_03261628.1| putative methyltransferase [Escherichia coli O157:H7 str. EC4042] gi|209400058|ref|YP_002272050.1| putative methyltransferase [Escherichia coli O157:H7 str. EC4115] gi|254794526|ref|YP_003079363.1| putative S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli O157:H7 str. TW14359] gi|262827974|sp|B5Z149|TRMN6_ECO5E RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName: Full=tRNA m6A37 methyltransferase gi|262828092|sp|C6UQY1|TRMN6_ECO5T RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName: Full=tRNA m6A37 methyltransferase gi|188017117|gb|EDU55239.1| putative methyltransferase [Escherichia coli O157:H7 str. EC4113] gi|189003446|gb|EDU72432.1| putative methyltransferase [Escherichia coli O157:H7 str. EC4076] gi|189355296|gb|EDU73715.1| putative methyltransferase [Escherichia coli O157:H7 str. EC4401] gi|189362238|gb|EDU80657.1| putative methyltransferase [Escherichia coli O157:H7 str. EC4486] gi|189376185|gb|EDU94601.1| putative methyltransferase [Escherichia coli O157:H7 str. EC508] gi|208733734|gb|EDZ82421.1| putative methyltransferase [Escherichia coli O157:H7 str. EC4045] gi|208741431|gb|EDZ89113.1| putative methyltransferase [Escherichia coli O157:H7 str. EC4042] gi|209161458|gb|ACI38891.1| putative methyltransferase [Escherichia coli O157:H7 str. EC4115] gi|254593926|gb|ACT73287.1| predicted S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli O157:H7 str. TW14359] Length = 245 Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust. Identities = 31/104 (29%), Positives = 49/104 (47%), Gaps = 5/104 (4%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 V R LD+G G+G + L L + + + V++ +A A+ N + ER + +D Sbjct: 45 VKRCLDIGAGSGLLALMLAQRTSDSVIIDAVELESEAATQAQENVAQSPWLERINVHTAD 104 Query: 157 ---WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197 W + FD+I+SNPPY E V+C + SLD Sbjct: 105 IQQWVTQQTARFDLIISNPPYYEQG-VECATPQREQARYTTSLD 147 >gi|229165871|ref|ZP_04293637.1| Type I restriction-modification system, M subunit [Bacillus cereus AH621] gi|228617576|gb|EEK74635.1| Type I restriction-modification system, M subunit [Bacillus cereus AH621] Length = 538 Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust. Identities = 29/99 (29%), Positives = 49/99 (49%), Gaps = 24/99 (24%) Query: 97 DVVRILDLGTGTGAVCLALLKESP---------FFKGVGVDISCKALEIAKSNAVTNGVS 147 D R+ D G+G++ L + E P F+ G +++ +A+ N + +GV+ Sbjct: 215 DQFRVYDPTMGSGSLLLTVQNELPNGDEEGSVEFY---GQELNTTTYNLARMNLMMHGVN 271 Query: 148 ------ERFDTLQSDW-FSSVEGL-----FDVIVSNPPY 174 +R DTL +DW F+ +G FD +V+NPPY Sbjct: 272 YRNMELKRADTLDADWPFAEKDGTQIPLKFDAVVANPPY 310 >gi|224585023|ref|YP_002638822.1| hypothetical protein SPC_3296 [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|224469551|gb|ACN47381.1| hypothetical protein SPC_3296 [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] Length = 378 Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust. Identities = 30/91 (32%), Positives = 50/91 (54%), Gaps = 4/91 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN--GVSERFDTLQSDWF 158 I+DLG G G + L+LL ++P K V VD S A++ ++ N TN ER + + ++ Sbjct: 232 IVDLGCGNGVIGLSLLAKNPQAKVVFVDESPMAVDSSRLNVETNLPEAFERCEFMINNAL 291 Query: 159 SSVEGL-FDVIVSNPPYIES-VIVDCLGLEV 187 S VE F+ + NPP+ + + D + E+ Sbjct: 292 SGVEPFRFNAVFCNPPFHQKHALTDNIAWEM 322 >gi|255068177|ref|ZP_05320032.1| ribosomal protein L11 methyltransferase [Neisseria sicca ATCC 29256] gi|255047604|gb|EET43068.1| ribosomal protein L11 methyltransferase [Neisseria sicca ATCC 29256] Length = 372 Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust. Identities = 32/120 (26%), Positives = 55/120 (45%), Gaps = 14/120 (11%) Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 D+GTG+G + A+L + + + D + KA+ A +N G+ ++ D F Sbjct: 197 FDIGTGSGVIA-AILAKRGISEIIATDTNPKAIACATANLARLGLDKQVVVQAVDLFP-- 253 Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221 EG D+IV NPP++ + +E +DP ++ +GV +HLN G Sbjct: 254 EGRADLIVCNPPWLPAKPTSA--VEAALYDPDNAM---------LTAFLNGVQQHLNPQG 302 >gi|218248299|ref|YP_002373670.1| type 12 methyltransferase [Cyanothece sp. PCC 8801] gi|257060374|ref|YP_003138262.1| methyltransferase type 12 [Cyanothece sp. PCC 8802] gi|218168777|gb|ACK67514.1| Methyltransferase type 12 [Cyanothece sp. PCC 8801] gi|256590540|gb|ACV01427.1| Methyltransferase type 12 [Cyanothece sp. PCC 8802] Length = 250 Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust. Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 6/86 (6%) Query: 90 LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 L + + +V + LDLG G G + A+ + P KG +DIS +E AK N + + + Sbjct: 43 LINLTQPNVDKFLDLGCGNGILGKAIYQNYPTAKGFFIDISDTMIEAAK-NTLNSDYESK 101 Query: 150 F---DTLQSDWFSSV--EGLFDVIVS 170 F D Q+ W + + E FDVIVS Sbjct: 102 FIIEDFSQNTWINCIIQEAPFDVIVS 127 >gi|149192207|ref|ZP_01870424.1| predicted O-methyltransferase [Vibrio shilonii AK1] gi|148833965|gb|EDL50985.1| predicted O-methyltransferase [Vibrio shilonii AK1] Length = 240 Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust. Identities = 27/85 (31%), Positives = 41/85 (48%), Gaps = 1/85 (1%) Query: 94 EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153 + RD ILD+GTGTG + L + + + +DI A++ A+ N + R L Sbjct: 39 QYRDSTHILDIGTGTGLLSLMIAQRYSDAQITSIDIDAVAIQDAELNVNRSPWHSRVSLL 98 Query: 154 QSDWFSS-VEGLFDVIVSNPPYIES 177 SD ++ F I+ NPPY S Sbjct: 99 HSDVLTTPFSESFSGIICNPPYFNS 123 >gi|41408894|ref|NP_961730.1| hypothetical protein MAP2796c [Mycobacterium avium subsp. paratuberculosis K-10] gi|41397253|gb|AAS05113.1| hypothetical protein MAP_2796c [Mycobacterium avium subsp. paratuberculosis K-10] Length = 250 Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust. Identities = 37/122 (30%), Positives = 51/122 (41%), Gaps = 19/122 (15%) Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRD------VVR-----------ILDLGTG 107 +T S D +P E+ D + LP D VVR +LD GTG Sbjct: 1 MTASFDPADPARFEEMYRDQRTSHGLPAATPWDIGGPQPVVRQLVALGAVKGEVLDPGTG 60 Query: 108 TGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDV 167 G A+ S F G+D S A+E A++NA GVS F+ + +G FD Sbjct: 61 PG--HHAIYYASQGFSATGIDGSAAAIERARANARKAGVSVNFELADATKLDGFDGRFDT 118 Query: 168 IV 169 +V Sbjct: 119 VV 120 >gi|325577156|ref|ZP_08147640.1| metallothionein SmtA [Haemophilus parainfluenzae ATCC 33392] gi|325160738|gb|EGC72859.1| metallothionein SmtA [Haemophilus parainfluenzae ATCC 33392] Length = 232 Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust. Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 4/82 (4%) Query: 97 DVVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQS 155 D RILD+GTGTG V L L + S + + +++ A + A+ N + R Sbjct: 35 DCQRILDMGTGTGLVALMLAQRSHEYCQIEAIELDPLAAQQAQENFKASPWHNRLHLTHQ 94 Query: 156 D---WFSSVEGLFDVIVSNPPY 174 D + +D+IV+NPPY Sbjct: 95 DVQTYCQKTAHQYDLIVANPPY 116 >gi|319441089|ref|ZP_07990245.1| methylase of peptide chain release factors [Corynebacterium variabile DSM 44702] Length = 348 Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust. Identities = 60/259 (23%), Positives = 96/259 (37%), Gaps = 49/259 (18%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR- 100 + R E + ILG V L + F PRPET+LL+D A + RI + R Sbjct: 76 VERRAAREPLQFILGTAPVVGVDLAVGPGVFIPRPETDLLIDWAAS----RITDWETRRR 131 Query: 101 --------------ILDLGTGTGAVCLAL--------LKESPFFKGVGVDISCKALEIAK 138 ++D +G G + L L L + + +G+++S AL+ A Sbjct: 132 STPLRAALVPPRFTVVDFCSGPGTISLGLAHMLTRSRLADRLDLRIIGIELSPTALDYAG 191 Query: 139 SNA--------VTNGVSERFDTLQSDWFSSVEGL-----FDVIVSNPPYIESVIVDCLGL 185 N + ++ F + + V GL D+++SNPPY+ G Sbjct: 192 RNLSDWQARGDIDPRIAVEFHRGDATDAALVTGLGLVAGADLVLSNPPYVPE---GDHGE 248 Query: 186 EVRDFDPRISLD------GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 V DP + D G DGL R +A ++ +VE V + Sbjct: 249 HVAAADPEVGADPHEAVYSGADGLELMRPLARIIAMTCAPHAEIAVEHDDATGQQVRELL 308 Query: 240 ESRKLFLVNAFKDYGGNDR 258 + +D+ G DR Sbjct: 309 ADAGIADPVQHRDFAGRDR 327 >gi|260576243|ref|ZP_05844235.1| methyltransferase small [Rhodobacter sp. SW2] gi|259021511|gb|EEW24815.1| methyltransferase small [Rhodobacter sp. SW2] Length = 252 Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust. Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 7/82 (8%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LDLG G G L L P G+++ ++A+ NA NG++ + ++ D + Sbjct: 47 VLDLGCGAGTAVLCLGARVPGLALAGLELQADYADLARRNAARNGLA--LEVVEGD-LAQ 103 Query: 161 VEGL----FDVIVSNPPYIESV 178 + G+ FD +++NPPY + Sbjct: 104 MPGVLLRDFDHVIANPPYYPTT 125 >gi|300770016|ref|ZP_07079895.1| methyltransferase [Sphingobacterium spiritivorum ATCC 33861] gi|300762492|gb|EFK59309.1| methyltransferase [Sphingobacterium spiritivorum ATCC 33861] Length = 236 Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust. Identities = 45/164 (27%), Positives = 73/164 (44%), Gaps = 21/164 (12%) Query: 98 VVRILDLGTGTGAVCLALLK--ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155 ILD+GTGTG + L L + E+ + V +D A + AK N + + SER Q Sbjct: 37 AAHILDIGTGTGVIALMLAQRFENAILEAVEID--ALAADRAKQNFLNSPFSERM-YAQH 93 Query: 156 DWFSSVEGL--FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213 F + + +D+I+SNPP+ D L + D R D L + + D Sbjct: 94 VSFEDLHPVSKYDLIISNPPF----YTDSL----HNPDNRKKTARHAD-LPFFERLFDFA 144 Query: 214 SRHLNKDGLCSVEI-----GYNQKVDVVRIFESRKLFLVNAFKD 252 RHL ++GL + + G Q + + + + V ++KD Sbjct: 145 GRHLMEEGLLRLILPPELAGQLQDIATTQELIAEHVIAVQSYKD 188 >gi|254900563|ref|ZP_05260487.1| hypothetical protein LmonJ_12134 [Listeria monocytogenes J0161] gi|254913486|ref|ZP_05263498.1| conserved hypothetical protein [Listeria monocytogenes J2818] gi|254937933|ref|ZP_05269630.1| conserved hypothetical protein [Listeria monocytogenes F6900] gi|258610542|gb|EEW23150.1| conserved hypothetical protein [Listeria monocytogenes F6900] gi|293591494|gb|EFF99828.1| conserved hypothetical protein [Listeria monocytogenes J2818] Length = 201 Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust. Identities = 24/74 (32%), Positives = 40/74 (54%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 +ILD+G G G + L + K P + VD++ +A+E+AK NA N ++ S + + Sbjct: 62 KILDVGCGYGPMGLTVAKAFPDSQIEMVDVNLRAIELAKENAEINKITNTHIYESSVYDN 121 Query: 160 SVEGLFDVIVSNPP 173 + I+SNPP Sbjct: 122 VTANDYQAIISNPP 135 >gi|115522664|ref|YP_779575.1| methyltransferase small [Rhodopseudomonas palustris BisA53] gi|115516611|gb|ABJ04595.1| methyltransferase small [Rhodopseudomonas palustris BisA53] Length = 291 Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust. Identities = 28/78 (35%), Positives = 46/78 (58%), Gaps = 7/78 (8%) Query: 100 RILDLGTGTG--AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 R++++GTG+G A+ AL S + +DI+ A+ A+ NA NGV + + SD Sbjct: 116 RVVEVGTGSGILAISAALAGASHV---LALDINPNAVRAARMNANFNGVGAQSEARVSDL 172 Query: 158 FSSVEG--LFDVIVSNPP 173 FS++ FDV++S+PP Sbjct: 173 FSALAADEKFDVVISSPP 190 >gi|213691732|ref|YP_002322318.1| methyltransferase small [Bifidobacterium longum subsp. infantis ATCC 15697] gi|213523193|gb|ACJ51940.1| methyltransferase small [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 218 Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust. Identities = 33/86 (38%), Positives = 42/86 (48%), Gaps = 14/86 (16%) Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG--------VSERFDTL 153 LDLG G G + L L ESP VD++ +AL++ +NA NG V E L Sbjct: 63 LDLGCGWGPIALTLAFESPEANVWAVDVNERALDLTHANAQANGRTNIHTAQVDESSTPL 122 Query: 154 ----QSDWFSSVEG--LFDVIVSNPP 173 Q + +V G FDVI SNPP Sbjct: 123 PAENQPAFCETVPGDLTFDVIWSNPP 148 >gi|168765032|ref|ZP_02790039.1| putative methyltransferase [Escherichia coli O157:H7 str. EC4501] gi|168790376|ref|ZP_02815383.1| putative methyltransferase [Escherichia coli O157:H7 str. EC869] gi|217327142|ref|ZP_03443225.1| putative methyltransferase [Escherichia coli O157:H7 str. TW14588] gi|261222989|ref|ZP_05937270.1| predicted S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli O157:H7 str. FRIK2000] gi|261259461|ref|ZP_05951994.1| predicted S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli O157:H7 str. FRIK966] gi|262831357|sp|Q8XA22|TRMN6_ECO57 RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName: Full=tRNA m6A37 methyltransferase gi|189365091|gb|EDU83507.1| putative methyltransferase [Escherichia coli O157:H7 str. EC4501] gi|189370140|gb|EDU88556.1| putative methyltransferase [Escherichia coli O157:H7 str. EC869] gi|217319509|gb|EEC27934.1| putative methyltransferase [Escherichia coli O157:H7 str. TW14588] gi|320188916|gb|EFW63575.1| putative methyltransferase [Escherichia coli O157:H7 str. EC1212] gi|320640824|gb|EFX10318.1| putative S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli O157:H7 str. G5101] gi|320646170|gb|EFX15110.1| putative S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli O157:H- str. 493-89] gi|320651465|gb|EFX19861.1| putative S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli O157:H- str. H 2687] gi|320657067|gb|EFX24886.1| S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320662732|gb|EFX30071.1| putative S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli O55:H7 str. USDA 5905] gi|320667552|gb|EFX34472.1| putative S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli O157:H7 str. LSU-61] gi|326345064|gb|EGD68808.1| putative methyltransferase [Escherichia coli O157:H7 str. 1044] Length = 245 Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust. Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 5/89 (5%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 V R LD+G G+G + L L + + + V++ +A A+ N + ER + +D Sbjct: 45 VKRCLDIGAGSGLLALMLAQRTSDSVIIDAVELESEAATQAQENVAQSPWLERINVHTAD 104 Query: 157 ---WFSSVEGLFDVIVSNPPYIESVIVDC 182 W + FD+I+SNPPY E V+C Sbjct: 105 IQQWVTQQTARFDLIISNPPYYEQG-VEC 132 >gi|16761501|ref|NP_457118.1| hypothetical protein STY2835 [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29140802|ref|NP_804144.1| hypothetical protein t0268 [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|213052329|ref|ZP_03345207.1| hypothetical protein Salmoneentericaenterica_04976 [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213425268|ref|ZP_03358018.1| hypothetical protein SentesTyphi_06008 [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213585705|ref|ZP_03367531.1| hypothetical protein SentesTyph_32327 [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] gi|213646346|ref|ZP_03376399.1| hypothetical protein SentesTy_02809 [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|213865165|ref|ZP_03387284.1| hypothetical protein SentesT_35611 [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|289825493|ref|ZP_06544700.1| tRNA (adenine-N(6)-)-methyltransferase [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|81853238|sp|Q8Z4J9|TRMN6_SALTI RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName: Full=tRNA m6A37 methyltransferase gi|25325409|pir||AC0830 conserved hypothetical protein STY2835 [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16503801|emb|CAD02791.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Typhi] gi|29136427|gb|AAO67993.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] Length = 245 Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust. Identities = 30/85 (35%), Positives = 43/85 (50%), Gaps = 6/85 (7%) Query: 97 DVVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQS 155 DV RILD+GTG+G + L L + + V V++ A A+ N + R T+ + Sbjct: 44 DVKRILDIGTGSGLLALMLAQRTDDSVPVDAVELDAGAAMQAQENVAHSPWPHRI-TVHT 102 Query: 156 D----WFSSVEGLFDVIVSNPPYIE 176 D W FD+I+SNPPY E Sbjct: 103 DDIQRWAPRQTVRFDLIISNPPYYE 127 >gi|20093502|ref|NP_613349.1| RNA methylase [Methanopyrus kandleri AV19] gi|19886334|gb|AAM01279.1| Predicted RNA methylase [Methanopyrus kandleri AV19] Length = 204 Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust. Identities = 28/77 (36%), Positives = 43/77 (55%), Gaps = 4/77 (5%) Query: 100 RILDLGTGTGAVCL-ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 R+LDLG GTG + + A L + V VD KA+E+A+ N GV +R + +++D Sbjct: 50 RVLDLGAGTGRIGIGAALAGACEVTCVEVD--SKAVEVARRNVKRAGVEDRVEVVEADVR 107 Query: 159 S-SVEGLFDVIVSNPPY 174 E +DV + NPP+ Sbjct: 108 DFEPEDQYDVTIMNPPF 124 >gi|294505249|ref|YP_003569311.1| ribosomal protein L11 methyltransferase [Yersinia pestis Z176003] gi|262367310|gb|ACY63867.1| ribosomal protein L11 methyltransferase [Yersinia pestis D182038] gi|294355708|gb|ADE66049.1| ribosomal protein L11 methyltransferase [Yersinia pestis Z176003] Length = 266 Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust. Identities = 40/120 (33%), Positives = 61/120 (50%), Gaps = 18/120 (15%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159 ++D G G+G + +A LK + +G+DI +A++ ++ NA NGVSER + L D Sbjct: 135 LIDFGCGSGILAIAALKLG-AARAIGIDIDPQAIQASRDNAQRNGVSERLELYLAKD--Q 191 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL---DGGIDGLSH-YRTIADGVSR 215 E DV+V+N L +R+ P IS+ GG GLS T A GV++ Sbjct: 192 PAELSADVVVAN----------ILAGPLRELAPLISVLPTTGGHLGLSGVLATQAAGVAQ 241 >gi|260890353|ref|ZP_05901616.1| putative N-6 adenine-specific DNA methylase [Leptotrichia hofstadii F0254] gi|260859973|gb|EEX74473.1| putative N-6 adenine-specific DNA methylase [Leptotrichia hofstadii F0254] Length = 228 Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust. Identities = 33/101 (32%), Positives = 47/101 (46%), Gaps = 10/101 (9%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 +DS L +I R +ILD+GTG G + L L + S + G+++ EIA N Sbjct: 14 LDSVLLADFVKIN-RKTKKILDIGTGCGIIALLLAQRSK-AQITGIELQETMAEIAIRNI 71 Query: 142 VTNGVSERFDTLQSD------WFSSVEGLFDVIVSNPPYIE 176 N + + D F+ E FD IV+NPPY E Sbjct: 72 NGNKFQNQVKIINEDIKNYKNIFNRDE--FDTIVTNPPYFE 110 >gi|229520952|ref|ZP_04410374.1| predicted O-methyltransferase [Vibrio cholerae TM 11079-80] gi|229342185|gb|EEO07181.1| predicted O-methyltransferase [Vibrio cholerae TM 11079-80] gi|259156558|gb|ACV96501.1| methyltransferase [Vibrio fluvialis Ind1] Length = 240 Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust. Identities = 26/80 (32%), Positives = 37/80 (46%), Gaps = 5/80 (6%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD---W 157 ILD+G GTG + L + P +DI A + A+ N + +ER + +D W Sbjct: 46 ILDIGCGTGLLSLMCAQRFPHAHITALDIEQSAYQAAEHNRQQSPWAERIECQHADILHW 105 Query: 158 FSSVEGLFDVIVSNPPYIES 177 S F I+ NPPY S Sbjct: 106 QPSKR--FAAIICNPPYFNS 123 >gi|212545214|ref|XP_002152761.1| conserved hypothetical protein [Penicillium marneffei ATCC 18224] gi|210065730|gb|EEA19824.1| conserved hypothetical protein [Penicillium marneffei ATCC 18224] Length = 156 Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust. Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 10/87 (11%) Query: 56 GWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL 115 G++ Y+ + TL++ + +S AF LP IEK D RILD+G G G + Sbjct: 9 GYKQGYS-KYTLAT-------QQSRTAESYAAFLLPHIEKGD--RILDVGCGPGTITTGF 58 Query: 116 LKESPFFKGVGVDISCKALEIAKSNAV 142 K VG+DIS + L+ AK +A Sbjct: 59 AKYVSGGSVVGIDISTEVLQNAKESAA 85 >gi|194446650|ref|YP_002042487.1| methyltransferase family protein [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|229564345|sp|B4T690|RLMG_SALNS RecName: Full=Ribosomal RNA large subunit methyltransferase G; AltName: Full=23S rRNA m2G1835 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rlmG gi|194405313|gb|ACF65535.1| methyltransferase family protein [Salmonella enterica subsp. enterica serovar Newport str. SL254] Length = 378 Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust. Identities = 30/91 (32%), Positives = 50/91 (54%), Gaps = 4/91 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN--GVSERFDTLQSDWF 158 I+DLG G G + L+LL ++P K V VD S A++ ++ N TN ER + + ++ Sbjct: 232 IVDLGCGNGVIGLSLLAKNPQAKVVFVDESPMAVDSSRLNVETNLPEAFERCEFMINNAL 291 Query: 159 SSVEGL-FDVIVSNPPYIES-VIVDCLGLEV 187 S VE F+ + NPP+ + + D + E+ Sbjct: 292 SGVEPFRFNAVFCNPPFHQKHALTDNIAWEM 322 >gi|62181737|ref|YP_218154.1| hypothetical protein SC3167 [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|197248542|ref|YP_002148150.1| methyltransferase family protein [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|75480702|sp|Q57JN9|RLMG_SALCH RecName: Full=Ribosomal RNA large subunit methyltransferase G; AltName: Full=23S rRNA m2G1835 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rlmG gi|229564339|sp|B5F6B6|RLMG_SALA4 RecName: Full=Ribosomal RNA large subunit methyltransferase G; AltName: Full=23S rRNA m2G1835 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rlmG gi|62129370|gb|AAX67073.1| paral putative methyltransferase [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|197212245|gb|ACH49642.1| methyltransferase family protein [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|322716223|gb|EFZ07794.1| Ribosomal RNA large subunit methyltransferase G [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 378 Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust. Identities = 30/91 (32%), Positives = 50/91 (54%), Gaps = 4/91 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN--GVSERFDTLQSDWF 158 I+DLG G G + L+LL ++P K V VD S A++ ++ N TN ER + + ++ Sbjct: 232 IVDLGCGNGVIGLSLLAKNPQAKVVFVDESPMAVDSSRLNVETNLPEAFERCEFMINNAL 291 Query: 159 SSVEGL-FDVIVSNPPYIES-VIVDCLGLEV 187 S VE F+ + NPP+ + + D + E+ Sbjct: 292 SGVEPFRFNAVFCNPPFHQKHALTDNIAWEM 322 >gi|282901083|ref|ZP_06309016.1| Putative Methyltransferase [Cylindrospermopsis raciborskii CS-505] gi|281194174|gb|EFA69138.1| Putative Methyltransferase [Cylindrospermopsis raciborskii CS-505] Length = 393 Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust. Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 1/88 (1%) Query: 84 SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143 +A F R + +RILD G G+G L+ +P+ VG+DIS LE+A+ + Sbjct: 40 AAYNFCTGRKPSKQDIRILDAGCGSGVSTEYLVHLNPYSHVVGIDISPGTLEVARKRCQS 99 Query: 144 NGVSE-RFDTLQSDWFSSVEGLFDVIVS 170 +G + F L + G FD+I S Sbjct: 100 SGANRVEFHHLSIYDVDQIPGKFDLINS 127 >gi|218547897|ref|YP_002381688.1| S-adenosyl-L-methionine-dependent methyltransferase [Escherichia fergusonii ATCC 35469] gi|262828282|sp|B7LUY9|TRMN6_ESCF3 RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName: Full=tRNA m6A37 methyltransferase gi|218355438|emb|CAQ88047.1| putative S-adenosyl-L-methionine-dependent methyltransferase [Escherichia fergusonii ATCC 35469] gi|323978395|gb|EGB73480.1| gyfiC [Escherichia coli TW10509] gi|324113102|gb|EGC07078.1| hypothetical protein ERIG_02707 [Escherichia fergusonii B253] Length = 245 Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust. Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 5/89 (5%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 V R LD+G G+G + L L + + + V++ +A A+ N + +ER + +D Sbjct: 45 VKRCLDIGAGSGLLALMLAQRTDDSVMIDAVELESEAATQAQENINQSPWAERINIYPAD 104 Query: 157 ---WFSSVEGLFDVIVSNPPYIESVIVDC 182 W + FD+I+SNPPY + V+C Sbjct: 105 IQQWITQQTARFDLIISNPPYYQQG-VEC 132 >gi|39998409|ref|NP_954360.1| ribosomal protein L11 methyltransferase [Geobacter sulfurreducens PCA] gi|39985356|gb|AAR36710.1| ribosomal protein L11 methyltransferase, putative [Geobacter sulfurreducens PCA] gi|298507353|gb|ADI86076.1| methyltransferase, putative [Geobacter sulfurreducens KN400] Length = 198 Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust. Identities = 29/82 (35%), Positives = 45/82 (54%), Gaps = 1/82 (1%) Query: 90 LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 L RI +R LDLG+GTG + +A ++ V VDI KA +N NGV++R Sbjct: 54 LERIPGLTGMRGLDLGSGTGILAIAAVRLGAASV-VAVDIDPKAAASCAANVRLNGVADR 112 Query: 150 FDTLQSDWFSSVEGLFDVIVSN 171 T+ + S GL+D++++N Sbjct: 113 VFTVCGELASVGRGLYDLLMAN 134 >gi|299530724|ref|ZP_07044139.1| methyltransferase small [Comamonas testosteroni S44] gi|298721240|gb|EFI62182.1| methyltransferase small [Comamonas testosteroni S44] Length = 404 Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust. Identities = 33/104 (31%), Positives = 49/104 (47%), Gaps = 4/104 (3%) Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162 D+G GTG + LLK V D S +AL A N G + R + +D F+ + Sbjct: 230 DIGVGTGVLSALLLKRG-VKSVVATDTSERALACACENLQRLGHASRVELQHADLFA--Q 286 Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206 G +IV NPP++ L + D D R+ L G + GL+ + Sbjct: 287 GQAGLIVCNPPWLPGKAASVLDQAIYDEDSRM-LRGFLQGLAAH 329 >gi|227357396|ref|ZP_03841752.1| ribosomal RNA small subunit methyltransferase C [Proteus mirabilis ATCC 29906] gi|227162476|gb|EEI47470.1| ribosomal RNA small subunit methyltransferase C [Proteus mirabilis ATCC 29906] Length = 337 Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust. Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 2/74 (2%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LD+ G G + L K++P K D++ A+ + + N + R + S+ +S+ Sbjct: 200 LLDMACGCGVIATVLGKKNPMLKLTLCDVNAAAISSSIATLNVNELEGR--VIASNVYSA 257 Query: 161 VEGLFDVIVSNPPY 174 VE +D IVSNPP+ Sbjct: 258 VEETYDWIVSNPPF 271 >gi|153949340|ref|YP_001399381.1| ribosomal protein L11 methyltransferase [Yersinia pseudotuberculosis IP 31758] gi|153997406|ref|ZP_02022506.1| ribosomal protein L11 methyltransferase [Yersinia pestis CA88-4125] gi|161484913|ref|NP_667555.2| ribosomal protein L11 methyltransferase [Yersinia pestis KIM 10] gi|161511288|ref|NP_995159.2| ribosomal protein L11 methyltransferase [Yersinia pestis biovar Microtus str. 91001] gi|166011411|ref|ZP_02232309.1| ribosomal protein L11 methyltransferase [Yersinia pestis biovar Antiqua str. E1979001] gi|167401975|ref|ZP_02307458.1| ribosomal protein L11 methyltransferase [Yersinia pestis biovar Antiqua str. UG05-0454] gi|170022705|ref|YP_001719210.1| ribosomal protein L11 methyltransferase [Yersinia pseudotuberculosis YPIII] gi|218930666|ref|YP_002348541.1| ribosomal protein L11 methyltransferase [Yersinia pestis CO92] gi|229836800|ref|ZP_04456965.1| methylase for 50S ribosomal subunit protein L11 [Yersinia pestis Pestoides A] gi|229839301|ref|ZP_04459460.1| methylase for 50S ribosomal subunit protein L11 [Yersinia pestis biovar Orientalis str. PEXU2] gi|229899863|ref|ZP_04515004.1| methylase for 50S ribosomal subunit protein L11 [Yersinia pestis biovar Orientalis str. India 195] gi|229904174|ref|ZP_04519285.1| methylase for 50S ribosomal subunit protein L11 [Yersinia pestis Nepal516] gi|38605410|sp|Q8ZAX6|PRMA_YERPE RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11 Mtase gi|166989901|sp|A7FDQ3|PRMA_YERP3 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11 Mtase gi|226710129|sp|B1JKF2|PRMA_YERPY RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11 Mtase gi|115349277|emb|CAL22244.1| ribosomal protein L11 methyltransferase [Yersinia pestis CO92] gi|149289043|gb|EDM39123.1| ribosomal protein L11 methyltransferase [Yersinia pestis CA88-4125] gi|152960835|gb|ABS48296.1| ribosomal protein L11 methyltransferase [Yersinia pseudotuberculosis IP 31758] gi|165989795|gb|EDR42096.1| ribosomal protein L11 methyltransferase [Yersinia pestis biovar Antiqua str. E1979001] gi|167048561|gb|EDR59969.1| ribosomal protein L11 methyltransferase [Yersinia pestis biovar Antiqua str. UG05-0454] gi|169749239|gb|ACA66757.1| ribosomal protein L11 methyltransferase [Yersinia pseudotuberculosis YPIII] gi|229678292|gb|EEO74397.1| methylase for 50S ribosomal subunit protein L11 [Yersinia pestis Nepal516] gi|229687355|gb|EEO79430.1| methylase for 50S ribosomal subunit protein L11 [Yersinia pestis biovar Orientalis str. India 195] gi|229695667|gb|EEO85714.1| methylase for 50S ribosomal subunit protein L11 [Yersinia pestis biovar Orientalis str. PEXU2] gi|229705743|gb|EEO91752.1| methylase for 50S ribosomal subunit protein L11 [Yersinia pestis Pestoides A] gi|262363312|gb|ACY60033.1| ribosomal protein L11 methyltransferase [Yersinia pestis D106004] gi|320017180|gb|ADW00752.1| methylase for 50S ribosomal subunit protein L11 [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 293 Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust. Identities = 40/120 (33%), Positives = 61/120 (50%), Gaps = 18/120 (15%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159 ++D G G+G + +A LK + +G+DI +A++ ++ NA NGVSER + L D Sbjct: 162 LIDFGCGSGILAIAALKLG-AARAIGIDIDPQAIQASRDNAQRNGVSERLELYLAKD--Q 218 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL---DGGIDGLSH-YRTIADGVSR 215 E DV+V+N L +R+ P IS+ GG GLS T A GV++ Sbjct: 219 PAELSADVVVAN----------ILAGPLRELAPLISVLPTTGGHLGLSGVLATQAAGVAQ 268 >gi|119026137|ref|YP_909982.1| hypothetical protein BAD_1119 [Bifidobacterium adolescentis ATCC 15703] gi|118765721|dbj|BAF39900.1| hypothetical protein [Bifidobacterium adolescentis ATCC 15703] Length = 203 Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust. Identities = 28/72 (38%), Positives = 39/72 (54%), Gaps = 2/72 (2%) Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 LDLG G G + LAL SP +D++ +ALE+ + NA NG+ +D + Sbjct: 65 LDLGCGWGPIALALGFASPKADIWALDVNERALELTRRNAELNGMG-NIHAATADGIPA- 122 Query: 162 EGLFDVIVSNPP 173 E FD+I SNPP Sbjct: 123 ETTFDLIWSNPP 134 >gi|312873984|ref|ZP_07734020.1| RNA methyltransferase, RsmD family [Lactobacillus iners LEAF 2052A-d] gi|325911478|ref|ZP_08173889.1| RNA methyltransferase, RsmD family [Lactobacillus iners UPII 143-D] gi|311090533|gb|EFQ48941.1| RNA methyltransferase, RsmD family [Lactobacillus iners LEAF 2052A-d] gi|325476678|gb|EGC79833.1| RNA methyltransferase, RsmD family [Lactobacillus iners UPII 143-D] Length = 182 Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust. Identities = 27/92 (29%), Positives = 46/92 (50%), Gaps = 7/92 (7%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+LDL G+GA+ L + + V VDI+ A EI K N + ERF+ ++ Sbjct: 44 RVLDLYAGSGALGLEAVSRG-YDSAVFVDINYAACEIIKKNILLTKEKERFEIFKNSDLR 102 Query: 160 SVEGL------FDVIVSNPPYIESVIVDCLGL 185 ++ L FD++ +PPY + I+ + + Sbjct: 103 AISILASRNYHFDLVFLDPPYAKEKIIKVMKI 134 >gi|227114012|ref|ZP_03827668.1| ribosomal protein L11 methyltransferase [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 295 Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust. Identities = 40/120 (33%), Positives = 61/120 (50%), Gaps = 18/120 (15%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159 I+D G G+G + +A LK + +G+DI +A++ ++ NA NGVSER + L D + Sbjct: 162 IIDFGCGSGILAIAALKLG-AARAIGIDIDPQAIQASRDNAQRNGVSERLELYLPKDQPA 220 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS---LDGGIDGLSH-YRTIADGVSR 215 + DV+V+N L +R+ P IS GG GLS T A+GV+ Sbjct: 221 DLSA--DVVVAN----------ILAGPLRELAPLISDLPKAGGHLGLSGVLATQAEGVAE 268 >gi|225570297|ref|ZP_03779322.1| hypothetical protein CLOHYLEM_06393 [Clostridium hylemonae DSM 15053] gi|225160829|gb|EEG73448.1| hypothetical protein CLOHYLEM_06393 [Clostridium hylemonae DSM 15053] Length = 251 Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust. Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 1/73 (1%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDW 157 ++ILDLGTG+G + + K+ P +G+DI KALE+ + A V F T Sbjct: 47 MKILDLGTGSGYLSFPIAKKYPNISIIGLDIVEKALEVNRFKANEENVQNISFITYDGVN 106 Query: 158 FSSVEGLFDVIVS 170 F + FD+++S Sbjct: 107 FPFADNEFDMVIS 119 >gi|50083924|ref|YP_045434.1| ribosomal RNA small subunit methyltransferase C (rRNA (guanine-N(2)-)-methyltransferase) (16S rRNA m2G1207 methyltransferase) [Acinetobacter sp. ADP1] gi|81393695|sp|Q6FE96|RSMC_ACIAD RecName: Full=Ribosomal RNA small subunit methyltransferase C; AltName: Full=16S rRNA m2G1207 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rsmC gi|49529900|emb|CAG67612.1| ribosomal RNA small subunit methyltransferase C (rRNA (guanine-N(2)-)-methyltransferase) (16S rRNA m2G1207 methyltransferase) [Acinetobacter sp. ADP1] Length = 338 Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust. Identities = 30/101 (29%), Positives = 44/101 (43%), Gaps = 1/101 (0%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 +D A LP + + + +I D G G G + L + SP + +DI AL + Sbjct: 179 LDIGTAVLLPYLNQIKLGKIADFGCGAGVISAYLAQLSPHNEIHALDIDAFALRSTEFTF 238 Query: 142 VTNGV-SERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181 NG+ SER DVIVSNPP+ + + D Sbjct: 239 QRNGLASERLHLHAVTGIQDAPKALDVIVSNPPFHQGIHTD 279 >gi|121728405|ref|ZP_01681433.1| conserved hypothetical protein [Vibrio cholerae V52] gi|147675421|ref|YP_001216155.1| hypothetical protein VC0395_A0192 [Vibrio cholerae O395] gi|262169960|ref|ZP_06037650.1| predicted O-methyltransferase [Vibrio cholerae RC27] gi|121629339|gb|EAX61771.1| conserved hypothetical protein [Vibrio cholerae V52] gi|146317304|gb|ABQ21843.1| conserved hypothetical protein [Vibrio cholerae O395] gi|227012486|gb|ACP08696.1| conserved hypothetical protein [Vibrio cholerae O395] gi|262021694|gb|EEY40405.1| predicted O-methyltransferase [Vibrio cholerae RC27] Length = 240 Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust. Identities = 26/80 (32%), Positives = 37/80 (46%), Gaps = 5/80 (6%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD---W 157 ILD+G GTG + L + P +DI A + A+ N + +ER + +D W Sbjct: 46 ILDIGCGTGLLSLMCAQRFPHAHITALDIEQSAYQAAEHNRQQSPWAERIECQHADILHW 105 Query: 158 FSSVEGLFDVIVSNPPYIES 177 S F I+ NPPY S Sbjct: 106 QPSKR--FAAIICNPPYFNS 123 >gi|325496345|gb|EGC94204.1| S-adenosyl-L-methionine-dependent methyltransferase [Escherichia fergusonii ECD227] Length = 239 Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust. Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 5/89 (5%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 V R LD+G G+G + L L + + + V++ +A A+ N + +ER + +D Sbjct: 39 VKRCLDIGAGSGLLALMLAQRTDDSVMIDAVELESEAATQAQENINQSPWAERINIYPAD 98 Query: 157 ---WFSSVEGLFDVIVSNPPYIESVIVDC 182 W + FD+I+SNPPY + V+C Sbjct: 99 IQQWITQQTARFDLIISNPPYYQQG-VEC 126 >gi|308176885|ref|YP_003916291.1| methyltransferase [Arthrobacter arilaitensis Re117] gi|307744348|emb|CBT75320.1| putative methyltransferase [Arthrobacter arilaitensis Re117] Length = 201 Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust. Identities = 26/74 (35%), Positives = 42/74 (56%), Gaps = 2/74 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 RILD+G G G + L ++SP + GVD++ +++++A+ NA G+S Sbjct: 60 RILDIGCGWGPITLTAAEQSPDSEVYGVDVNERSIDLARLNATAFGLSNVVVGSPDSIDP 119 Query: 160 SVEGLFDVIVSNPP 173 S++ FD I SNPP Sbjct: 120 SLQ--FDTIWSNPP 131 >gi|270263298|ref|ZP_06191568.1| ribosomal protein L11 methyltransferase [Serratia odorifera 4Rx13] gi|270042986|gb|EFA16080.1| ribosomal protein L11 methyltransferase [Serratia odorifera 4Rx13] Length = 293 Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust. Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 4/72 (5%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159 I+D G G+G + +A LK + +G+DI +A++ ++ NA NGVSER + L D Sbjct: 162 IIDFGCGSGILAIAALKLG-AERAIGIDIDPQAIQASRDNAQRNGVSERLELYLPKD--Q 218 Query: 160 SVEGLFDVIVSN 171 + L DV+V+N Sbjct: 219 PADLLADVVVAN 230 >gi|28377564|ref|NP_784456.1| 16S RNA methylase [Lactobacillus plantarum WCFS1] gi|300769758|ref|ZP_07079640.1| methyltransferase domain protein [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308179717|ref|YP_003923845.1| 16S RNA methylase [Lactobacillus plantarum subsp. plantarum ST-III] gi|28270396|emb|CAD63299.1| 16S RNA methylase [Lactobacillus plantarum WCFS1] gi|300492666|gb|EFK27852.1| methyltransferase domain protein [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308045208|gb|ADN97751.1| 16S RNA methylase [Lactobacillus plantarum subsp. plantarum ST-III] Length = 202 Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust. Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 2/74 (2%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LDLGTG G + +AL +SP VD++ AL +A+ N N ++ + SD + Sbjct: 63 MLDLGTGYGPIGMALAYQSPERTVDMVDVNELALSLARKNVALNQITNT-NIFTSDVYQQ 121 Query: 161 VEGL-FDVIVSNPP 173 V + IV+NPP Sbjct: 122 VTATNYAAIVTNPP 135 >gi|326789154|ref|YP_004306975.1| methyltransferase small [Clostridium lentocellum DSM 5427] gi|326539918|gb|ADZ81777.1| methyltransferase small [Clostridium lentocellum DSM 5427] Length = 253 Score = 43.1 bits (100), Expect = 0.042, Method: Compositional matrix adjust. Identities = 27/86 (31%), Positives = 49/86 (56%), Gaps = 12/86 (13%) Query: 100 RILDLGTGTGAVCLALLKESPFFKG--VGVDISCKALEIA----KSNAVTNGVSERFDTL 153 ++LD+GTGTG + + + + + KG G+DI + +E+A K N + V+ + + Sbjct: 51 KVLDIGTGTGIIPIVM--HAIYGKGHFTGIDIQEEMIEMASRSVKLNEIDTDVTMKVMDI 108 Query: 154 Q--SDWFSSVEGLFDVIVSNPPYIES 177 + + FS+ G FD+I NPPY++ Sbjct: 109 KDYKEHFST--GYFDIITCNPPYMKG 132 >gi|302535283|ref|ZP_07287625.1| rRNA or tRNA methyltransferase [Streptomyces sp. C] gi|302444178|gb|EFL15994.1| rRNA or tRNA methyltransferase [Streptomyces sp. C] Length = 504 Score = 43.1 bits (100), Expect = 0.042, Method: Compositional matrix adjust. Identities = 41/134 (30%), Positives = 59/134 (44%), Gaps = 16/134 (11%) Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 LDLGTG+G L + + + D++ +ALE + +G E + L F V Sbjct: 165 LDLGTGSGIQALHAAQHA--TRVTATDVNPRALEFTRLTLALSGAPE-AELLAGSLFEPV 221 Query: 162 -EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220 + +D+IVSNPP+ VI L R DGG+ G RT+ HLN Sbjct: 222 GDATYDLIVSNPPF---VISPGARLTYR--------DGGMGGDDLCRTLVQQAGDHLNPG 270 Query: 221 GLCSVEIGYNQKVD 234 G +G Q V+ Sbjct: 271 GYAQF-LGNWQHVE 283 >gi|325912855|ref|ZP_08175233.1| RNA methyltransferase, RsmD family [Lactobacillus iners UPII 60-B] gi|329921332|ref|ZP_08277770.1| RNA methyltransferase, RsmD family [Lactobacillus iners SPIN 1401G] gi|325477848|gb|EGC80982.1| RNA methyltransferase, RsmD family [Lactobacillus iners UPII 60-B] gi|328934624|gb|EGG31128.1| RNA methyltransferase, RsmD family [Lactobacillus iners SPIN 1401G] Length = 182 Score = 43.1 bits (100), Expect = 0.042, Method: Compositional matrix adjust. Identities = 27/92 (29%), Positives = 46/92 (50%), Gaps = 7/92 (7%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+LDL G+GA+ L + + V VDI+ A EI K N + ERF+ ++ Sbjct: 44 RVLDLYAGSGALGLEAVSRG-YDSAVFVDINYAACEIIKKNILLTKERERFEIFKNSDLR 102 Query: 160 SVEGL------FDVIVSNPPYIESVIVDCLGL 185 ++ L FD++ +PPY + I+ + + Sbjct: 103 AISILASRNYHFDLVFLDPPYAKEKIIKVMKI 134 >gi|321310228|ref|YP_004192557.1| type I restriction-modification system, M subunit [Mycoplasma haemofelis str. Langford 1] gi|319802072|emb|CBY92718.1| type I restriction-modification system, M subunit [Mycoplasma haemofelis str. Langford 1] Length = 513 Score = 43.1 bits (100), Expect = 0.042, Method: Compositional matrix adjust. Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 9/90 (10%) Query: 94 EKRDVVRILDLGTGTGAVCLALLKESPFFKGV---GVDISCKALEIAKSNAVTNGVS-ER 149 EK V ++ D G+G++ L +K KGV G + + + + N +G+S Sbjct: 213 EKEKVSKVYDPTCGSGSLLLKFMKMYGRDKGVKVYGQENNVTTYNLCRMNMFIHGMSFND 272 Query: 150 FD-----TLQSDWFSSVEGLFDVIVSNPPY 174 FD TL + EG+FDV++SNPPY Sbjct: 273 FDICLGDTLGEPCLTHEEGMFDVVISNPPY 302 >gi|304373128|ref|YP_003856337.1| Methyltransferase small domain protein [Mycoplasma hyorhinis HUB-1] gi|304309319|gb|ADM21799.1| Methyltransferase small domain protein [Mycoplasma hyorhinis HUB-1] Length = 257 Score = 43.1 bits (100), Expect = 0.042, Method: Compositional matrix adjust. Identities = 39/163 (23%), Positives = 74/163 (45%), Gaps = 23/163 (14%) Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD----W 157 L++GT A+ + + + +DI KA+E+AK N + N + + + D W Sbjct: 50 LEIGTNNAALAIFVAERDSNLLIDAIDIQQKAIELAKENVILNKKEAQINLITQDFNDFW 109 Query: 158 FSSV---EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS--LDGGIDGLS-HYRTIAD 211 + +D+I +NPPY + L ++ +IS L I +S + I Sbjct: 110 KEHTKLQKRKYDLIFTNPPYYK--------LGTKNVKKQISEELKKAIYEISINLEQIIL 161 Query: 212 GVSRHLNKDGLCSVEIGYNQKVDVVRI-----FESRKLFLVNA 249 G S+ + + G+ S+ + + VDV+ + FE +K+ + A Sbjct: 162 GSSKIIQQKGILSMVLPVERLVDVIELLRKYKFEPKKIQFIFA 204 >gi|254719449|ref|ZP_05181260.1| ribosomal protein L11 methyltransferase [Brucella sp. 83/13] gi|265984454|ref|ZP_06097189.1| ribosomal protein L11 methyltransferase [Brucella sp. 83/13] gi|306839226|ref|ZP_07472043.1| ribosomal protein L11 methyltransferase [Brucella sp. NF 2653] gi|264663046|gb|EEZ33307.1| ribosomal protein L11 methyltransferase [Brucella sp. 83/13] gi|306405773|gb|EFM62035.1| ribosomal protein L11 methyltransferase [Brucella sp. NF 2653] Length = 285 Score = 43.1 bits (100), Expect = 0.042, Method: Compositional matrix adjust. Identities = 27/83 (32%), Positives = 41/83 (49%), Gaps = 5/83 (6%) Query: 93 IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152 +E LDLGTG+ + +A+ K +P + DI A+ +A NA NGV+E T Sbjct: 142 VETEHPTNALDLGTGSAVLAIAIAKLAP-IPILATDIDPIAVTVAAENAAKNGVAEHIVT 200 Query: 153 LQSDWFSSV----EGLFDVIVSN 171 ++ F FD+IV+N Sbjct: 201 ATAEGFGHPIFRSYSPFDLIVAN 223 >gi|32034232|ref|ZP_00134443.1| COG4123: Predicted O-methyltransferase [Actinobacillus pleuropneumoniae serovar 1 str. 4074] Length = 216 Score = 43.1 bits (100), Expect = 0.042, Method: Compositional matrix adjust. Identities = 27/77 (35%), Positives = 38/77 (49%), Gaps = 2/77 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 +ILDLGTGTG V + L + + + +++ A A N + S+R Q D Sbjct: 21 QILDLGTGTGLVAIMLAQRTDENTQISALELEPNAYRQAVENCRNSAFSDRLQVYQGDVL 80 Query: 159 S-SVEGLFDVIVSNPPY 174 FD+IVSNPPY Sbjct: 81 DYHFHQKFDLIVSNPPY 97 >gi|310780112|ref|YP_003968444.1| methyltransferase small [Ilyobacter polytropus DSM 2926] gi|309749435|gb|ADO84096.1| methyltransferase small [Ilyobacter polytropus DSM 2926] Length = 245 Score = 43.1 bits (100), Expect = 0.042, Method: Compositional matrix adjust. Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 5/85 (5%) Query: 96 RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155 R V +ILDLGTG G++ + L S + GV+I + ++A+ N N + E+ + Sbjct: 44 RGVNKILDLGTGNGSIPMLLSSRSK-ARITGVEIQEVSADLARRNIELNKLQEQVGIIHD 102 Query: 156 D---WFSSVE-GLFDVIVSNPPYIE 176 D W + G D ++SNPP+ + Sbjct: 103 DLKNWKKHFKTGSQDAVISNPPFFK 127 >gi|261866895|ref|YP_003254817.1| phosphatidylserine synthase [Aggregatibacter actinomycetemcomitans D11S-1] gi|261412227|gb|ACX81598.1| phosphatidylserine synthase [Aggregatibacter actinomycetemcomitans D11S-1] Length = 232 Score = 43.1 bits (100), Expect = 0.042, Method: Compositional matrix adjust. Identities = 27/87 (31%), Positives = 46/87 (52%), Gaps = 5/87 (5%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD-- 156 +ILDLG G+G + L L + S + V+I A + A+ N + ++ Q + Sbjct: 37 QILDLGCGSGLIALMLAQRSSAESRICAVEIDPAAAQQAQENVSASPWKDKIQVYQQNIE 96 Query: 157 -WFSSVEGLFDVIVSNPPYIESVIVDC 182 + + + FD+IV+NPPY ++ VDC Sbjct: 97 TFCAQSKHAFDLIVANPPYFQTG-VDC 122 >gi|229491274|ref|ZP_04385100.1| rRNA or tRNA methylase [Rhodococcus erythropolis SK121] gi|229321813|gb|EEN87608.1| rRNA or tRNA methylase [Rhodococcus erythropolis SK121] Length = 499 Score = 43.1 bits (100), Expect = 0.042, Method: Compositional matrix adjust. Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 11/79 (13%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDT--LQSDW 157 +LDLGTG G + L + + V DI+ +A+++ + N R D LQ W Sbjct: 163 VLDLGTGCG---IQALHANTYADSVTATDINQRAVDLTAATMALN----RLDVELLQGSW 215 Query: 158 FSSVEG-LFDVIVSNPPYI 175 F VEG FD +V+NPP++ Sbjct: 216 FEPVEGRTFDQVVANPPFV 234 >gi|291457545|ref|ZP_06596935.1| putative methyltransferase small domain protein [Bifidobacterium breve DSM 20213] gi|291380598|gb|EFE88116.1| putative methyltransferase small domain protein [Bifidobacterium breve DSM 20213] Length = 222 Score = 43.1 bits (100), Expect = 0.042, Method: Compositional matrix adjust. Identities = 33/87 (37%), Positives = 42/87 (48%), Gaps = 14/87 (16%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG--------VSERFDT 152 +LDLG G G + LAL SP VD++ +ALE+ NA NG V E Sbjct: 66 VLDLGCGWGPIALALAFASPEANVWAVDVNERALELTHVNAEANGCRNIHTTQVDETSTP 125 Query: 153 LQSDWFSS----VEG--LFDVIVSNPP 173 L +D S+ + G FD I SNPP Sbjct: 126 LPADRQSAHCEPIPGDLTFDAIWSNPP 152 >gi|163868701|ref|YP_001609913.1| ribosomal protein L11 methyltransferase [Bartonella tribocorum CIP 105476] gi|161018360|emb|CAK01918.1| ribosomal protein L11 methyltransferase [Bartonella tribocorum CIP 105476] Length = 289 Score = 43.1 bits (100), Expect = 0.042, Method: Compositional matrix adjust. Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 5/83 (6%) Query: 93 IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152 I+ + LDLGTG+G + +A+ K P + DI A+++A+ N NGV + Sbjct: 146 IKHENPQNALDLGTGSGVLAIAIAKLKP-IAILATDIDPIAIKVAQHNMALNGVEKYITA 204 Query: 153 LQSDWFSSVE----GLFDVIVSN 171 + + F+ E FD+I++N Sbjct: 205 ITATGFTHNEITSRAPFDLIIAN 227 >gi|126209360|ref|YP_001054585.1| hypothetical protein APL_1900 [Actinobacillus pleuropneumoniae L20] gi|262827737|sp|A3N3J4|TRMN6_ACTP2 RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName: Full=tRNA m6A37 methyltransferase gi|126098152|gb|ABN74980.1| hypothetical protein APL_1900 [Actinobacillus pleuropneumoniae serovar 5b str. L20] Length = 236 Score = 43.1 bits (100), Expect = 0.042, Method: Compositional matrix adjust. Identities = 28/81 (34%), Positives = 39/81 (48%), Gaps = 2/81 (2%) Query: 96 RDVVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQ 154 R +ILDLGTGTG V + L + + + +++ A A N + S+R Q Sbjct: 37 RHKRQILDLGTGTGLVAIMLAQRTDENTQISALELEPNAYRQAVENCRNSAFSDRLQVYQ 96 Query: 155 SDWFS-SVEGLFDVIVSNPPY 174 D FD+IVSNPPY Sbjct: 97 GDVLDYHFHQKFDLIVSNPPY 117 >gi|330723241|gb|AEC45611.1| Methyltransferase small domain protein [Mycoplasma hyorhinis MCLD] Length = 257 Score = 43.1 bits (100), Expect = 0.043, Method: Compositional matrix adjust. Identities = 39/163 (23%), Positives = 74/163 (45%), Gaps = 23/163 (14%) Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD----W 157 L++GT A+ + + + +DI KA+E+AK N + N + + + D W Sbjct: 50 LEIGTNNAALAIFVAERDSNLLIDAIDIQQKAIELAKENVILNKKEAQINLITQDFNDFW 109 Query: 158 FSSV---EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS--LDGGIDGLS-HYRTIAD 211 + +D+I +NPPY + L ++ +IS L I +S + I Sbjct: 110 KEHTKLQKRKYDLIFTNPPYYK--------LGTKNVKKQISEELKKAIYEISINLEQIIL 161 Query: 212 GVSRHLNKDGLCSVEIGYNQKVDVVRI-----FESRKLFLVNA 249 G S+ + + G+ S+ + + VDV+ + FE +K+ + A Sbjct: 162 GSSKIIQQKGILSMVLPVERLVDVIELLRKYKFEPKKIQFIFA 204 >gi|303249672|ref|ZP_07335877.1| hypothetical protein APP6_1080 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|303253812|ref|ZP_07339946.1| hypothetical protein APP2_0997 [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|307246835|ref|ZP_07528901.1| tRNA (adenine-N(6)-)-methyltransferase [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307248975|ref|ZP_07530984.1| tRNA (adenine-N(6)-)-methyltransferase [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|307253591|ref|ZP_07535459.1| tRNA (adenine-N(6)-)-methyltransferase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307255819|ref|ZP_07537621.1| tRNA (adenine-N(6)-)-methyltransferase [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307258007|ref|ZP_07539760.1| tRNA (adenine-N(6)-)-methyltransferase [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|307260271|ref|ZP_07541979.1| tRNA (adenine-N(6)-)-methyltransferase [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|307262400|ref|ZP_07544046.1| tRNA (adenine-N(6)-)-methyltransferase [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|302647335|gb|EFL77557.1| hypothetical protein APP2_0997 [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|302651484|gb|EFL81635.1| hypothetical protein APP6_1080 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306852306|gb|EFM84545.1| tRNA (adenine-N(6)-)-methyltransferase [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306854521|gb|EFM86715.1| tRNA (adenine-N(6)-)-methyltransferase [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|306858971|gb|EFM91016.1| tRNA (adenine-N(6)-)-methyltransferase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306861282|gb|EFM93274.1| tRNA (adenine-N(6)-)-methyltransferase [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306863554|gb|EFM95484.1| tRNA (adenine-N(6)-)-methyltransferase [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306865718|gb|EFM97598.1| tRNA (adenine-N(6)-)-methyltransferase [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306867948|gb|EFM99778.1| tRNA (adenine-N(6)-)-methyltransferase [Actinobacillus pleuropneumoniae serovar 12 str. 1096] Length = 236 Score = 43.1 bits (100), Expect = 0.043, Method: Compositional matrix adjust. Identities = 28/81 (34%), Positives = 39/81 (48%), Gaps = 2/81 (2%) Query: 96 RDVVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQ 154 R +ILDLGTGTG V + L + + + +++ A A N + S+R Q Sbjct: 37 RHKRQILDLGTGTGLVAIMLAQRTDENTQISALELEPNAYRQAVENCRNSAFSDRLQVYQ 96 Query: 155 SDWFS-SVEGLFDVIVSNPPY 174 D FD+IVSNPPY Sbjct: 97 GDVLDYHFHQKFDLIVSNPPY 117 >gi|115760355|ref|XP_780350.2| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] gi|115949727|ref|XP_001184504.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] Length = 292 Score = 43.1 bits (100), Expect = 0.043, Method: Compositional matrix adjust. Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 10/90 (11%) Query: 89 SLPRIEK--RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG- 145 S+P+IE+ + +RILDLG G G+ L + P VG+D S +A+ K A G Sbjct: 95 SMPQIEEQMKSGIRILDLGCGRGSASLVFAESYPNSTVVGLDFSQEAINYGKERAKEKGL 154 Query: 146 -----VSERFDTLQSDWFSSVEGLF--DVI 168 V E + DW ++++ ++ DVI Sbjct: 155 TNVEFVCEDAACISEDWNNTIDYIYTNDVI 184 >gi|320451402|ref|YP_004203498.1| menaquinone biosynthesis methyltransferase UbiE [Thermus scotoductus SA-01] gi|320151571|gb|ADW22949.1| menaquinone biosynthesis methyltransferase UbiE [Thermus scotoductus SA-01] Length = 235 Score = 43.1 bits (100), Expect = 0.043, Method: Compositional matrix adjust. Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 4/71 (5%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 RILDL TGTG + L L +++P + VG D + L IA+ A G++ F L++D S Sbjct: 53 RILDLATGTGDLALMLKRKAPTAQVVGADFALPMLGIARRKARAQGLAVEF--LEADALS 110 Query: 160 --SVEGLFDVI 168 +G F+ I Sbjct: 111 LPFPQGSFEAI 121 >gi|291085014|ref|ZP_06351774.2| SAM-dependent methyltransferase [Citrobacter youngae ATCC 29220] gi|291071652|gb|EFE09761.1| SAM-dependent methyltransferase [Citrobacter youngae ATCC 29220] Length = 268 Score = 43.1 bits (100), Expect = 0.043, Method: Compositional matrix adjust. Identities = 29/89 (32%), Positives = 45/89 (50%), Gaps = 5/89 (5%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 V RILD+GTG+G + L L + + + V+++ A + A+ N + R + D Sbjct: 68 VKRILDIGTGSGLLALMLAQRTDDNVMIDAVELNVDAAQQAQENIAQSPWMHRVNVHTED 127 Query: 157 ---WFSSVEGLFDVIVSNPPYIESVIVDC 182 W FD+I+SNPPY E V+C Sbjct: 128 AQLWIPRQTVRFDLIISNPPYYEQG-VEC 155 >gi|262201923|ref|YP_003273131.1| methyltransferase small [Gordonia bronchialis DSM 43247] gi|262085270|gb|ACY21238.1| methyltransferase small [Gordonia bronchialis DSM 43247] Length = 514 Score = 43.1 bits (100), Expect = 0.043, Method: Compositional matrix adjust. Identities = 49/141 (34%), Positives = 70/141 (49%), Gaps = 16/141 (11%) Query: 87 AFSLPR-IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145 + SL R I + V R LDLGTG G L L + + V D + +AL +A + A NG Sbjct: 161 SVSLARAIIREPVGRALDLGTGCGIQALHL--DGHCAEIVATDTNDRALRLAAATARING 218 Query: 146 VSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204 +S +D F VEG FD+IVSNPP++ +G RD+ I D G+ G + Sbjct: 219 MS--WDLRAGSLFEPVEGERFDLIVSNPPFV-------VGAGDRDY---IYRDSGMAGDA 266 Query: 205 HYRTIADGVSRHLNKDGLCSV 225 ++ G+ HLN G + Sbjct: 267 LCESLIRGIPDHLNPGGTAQL 287 >gi|260494434|ref|ZP_05814564.1| ribosomal RNA small subunit methyltransferase C [Fusobacterium sp. 3_1_33] gi|260197596|gb|EEW95113.1| ribosomal RNA small subunit methyltransferase C [Fusobacterium sp. 3_1_33] Length = 225 Score = 43.1 bits (100), Expect = 0.043, Method: Compositional matrix adjust. Identities = 28/98 (28%), Positives = 52/98 (53%), Gaps = 6/98 (6%) Query: 83 DSALAFSL--PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140 D+ L F L + K+++ ++LD+GTG G + + L + VG+DI + ++ A Sbjct: 29 DTILLFKLFQASLNKKNI-KLLDIGTGNGILPILLSNNEFLSELVGIDIQKENIDRANKA 87 Query: 141 AVTNGVSE--RFDTLQSDWFSSVEGLFDVIVSNPPYIE 176 N + + +F+ + + FDVI+SNPPY++ Sbjct: 88 LQLNKIEKNIQFECIDIREYRK-SNYFDVIISNPPYMD 124 >gi|158530275|gb|ABW71836.1| methyltransferase [Streptomyces refuineus subsp. thermotolerans] Length = 352 Score = 43.1 bits (100), Expect = 0.043, Method: Compositional matrix adjust. Identities = 23/70 (32%), Positives = 38/70 (54%) Query: 90 LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 L + R V R+LD+G G G + + P G+G+DI A+ +A A +GVS+R Sbjct: 165 LEAMRGRGVRRMLDIGCGGGQLIVDACLRDPSLTGIGLDIDADAIAVANDLARRHGVSDR 224 Query: 150 FDTLQSDWFS 159 + + +D F+ Sbjct: 225 VEFVVADAFA 234 >gi|319638153|ref|ZP_07992916.1| hypothetical protein HMPREF0604_00539 [Neisseria mucosa C102] gi|317400426|gb|EFV81084.1| hypothetical protein HMPREF0604_00539 [Neisseria mucosa C102] Length = 371 Score = 43.1 bits (100), Expect = 0.043, Method: Compositional matrix adjust. Identities = 32/125 (25%), Positives = 57/125 (45%), Gaps = 14/125 (11%) Query: 97 DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 ++ D+GTG+G + A+L + + D + KA+ A +N G+ + + D Sbjct: 192 NIQTAFDIGTGSGVIA-AILAKRGIPDIIATDTNPKAIACATANLERLGLDKAVNIQSID 250 Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216 F E D+IV NPP++ + +E+ +DP ++ +GVS H Sbjct: 251 LFP--ETCADLIVCNPPWLPAKPTS--AIEIALYDPNNAM---------LTAFLNGVSHH 297 Query: 217 LNKDG 221 LN +G Sbjct: 298 LNPNG 302 >gi|259500696|ref|ZP_05743598.1| conserved hypothetical protein [Lactobacillus iners DSM 13335] gi|259168080|gb|EEW52575.1| conserved hypothetical protein [Lactobacillus iners DSM 13335] Length = 147 Score = 43.1 bits (100), Expect = 0.043, Method: Compositional matrix adjust. Identities = 27/92 (29%), Positives = 46/92 (50%), Gaps = 7/92 (7%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+LDL G+GA+ L + + V VDI+ A EI K N + ERF+ ++ Sbjct: 9 RVLDLYAGSGALGLEAVSRG-YDSAVFVDINYAACEIIKKNILLTKEKERFEIFKNSDLR 67 Query: 160 SVEGL------FDVIVSNPPYIESVIVDCLGL 185 ++ L FD++ +PPY + I+ + + Sbjct: 68 AISILASRNYHFDLVFLDPPYAKEKIIKVMKI 99 >gi|188582540|ref|YP_001925985.1| methyltransferase small [Methylobacterium populi BJ001] gi|179346038|gb|ACB81450.1| methyltransferase small [Methylobacterium populi BJ001] Length = 250 Score = 43.1 bits (100), Expect = 0.043, Method: Compositional matrix adjust. Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 9/85 (10%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 + DLG TGAV LA + S + V V+ +A+ NA NG++ER + +D + Sbjct: 44 LYDLGASTGAVGLAAARMSEACRVVLVERDPDLAALARENASANGLAERVAVIAADVLAP 103 Query: 161 ---------VEGLFDVIVSNPPYIE 176 G D++++NPP+ E Sbjct: 104 GAQRRAAGLQAGCADIVLTNPPFFE 128 >gi|146304657|ref|YP_001191973.1| hypothetical protein Msed_1909 [Metallosphaera sedula DSM 5348] gi|145702907|gb|ABP96049.1| hypothetical protein Msed_1909 [Metallosphaera sedula DSM 5348] Length = 165 Score = 43.1 bits (100), Expect = 0.043, Method: Compositional matrix adjust. Identities = 27/87 (31%), Positives = 47/87 (54%), Gaps = 6/87 (6%) Query: 72 FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131 F P PE +L + ++ D+V DLG G G + +A +K K VGVD+S Sbjct: 13 FVPTPEKVVL----KMLEVAKVGPEDIV--YDLGCGDGRIIIAAVKNFGAKKAVGVDLSD 66 Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWF 158 + L+ A+ NA+ NGV ++ + ++++ Sbjct: 67 ERLKEAEQNAIQNGVRDKIELRKNNFL 93 >gi|72175451|ref|XP_798637.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] gi|115949725|ref|XP_001184379.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] Length = 364 Score = 43.1 bits (100), Expect = 0.043, Method: Compositional matrix adjust. Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 10/90 (11%) Query: 89 SLPRIEKR--DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG- 145 S+P+IE+R +RILDLG G G L + P VG+D S +A+ K A G Sbjct: 167 SMPQIEERMKSGIRILDLGCGRGLASLVFAENYPNSTVVGLDFSEEAINYGKERAKEKGL 226 Query: 146 -----VSERFDTLQSDWFSSVEGL--FDVI 168 V E + DW ++++ + FDVI Sbjct: 227 TNVEFVCEDAACIPDDWNNTIDYIYTFDVI 256 >gi|89093754|ref|ZP_01166700.1| hypothetical protein MED92_04629 [Oceanospirillum sp. MED92] gi|89081884|gb|EAR61110.1| hypothetical protein MED92_04629 [Oceanospirillum sp. MED92] Length = 398 Score = 43.1 bits (100), Expect = 0.043, Method: Compositional matrix adjust. Identities = 45/152 (29%), Positives = 65/152 (42%), Gaps = 35/152 (23%) Query: 100 RILDLGT---GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 R+LDL + G GA LA + + + VD S ALE+A NA N +RF+ D Sbjct: 223 RVLDLFSYVGGWGAQALA----AGASQAICVDASHFALEVAAENARINNAEDRFEGFHGD 278 Query: 157 WFSSVEGL------FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210 F + L FDV+V +PP D VR +G Y + Sbjct: 279 AFDICKSLIADKEKFDVVVLDPPAFIQKKKD-----VR------------NGERAYSRMN 321 Query: 211 DGVSRHLNKDGL-----CSVEIGYNQKVDVVR 237 + R L KDG+ CS+ + + VD++R Sbjct: 322 NFAMRLLKKDGILVSASCSMHLQRERLVDIIR 353 >gi|260588968|ref|ZP_05854881.1| putative N-6 adenine-specific DNA methylase [Blautia hansenii DSM 20583] gi|331083310|ref|ZP_08332423.1| hypothetical protein HMPREF0992_01347 [Lachnospiraceae bacterium 6_1_63FAA] gi|260540747|gb|EEX21316.1| putative N-6 adenine-specific DNA methylase [Blautia hansenii DSM 20583] gi|330404391|gb|EGG83936.1| hypothetical protein HMPREF0992_01347 [Lachnospiraceae bacterium 6_1_63FAA] Length = 249 Score = 43.1 bits (100), Expect = 0.044, Method: Compositional matrix adjust. Identities = 27/83 (32%), Positives = 41/83 (49%), Gaps = 9/83 (10%) Query: 100 RILDLGTGTGAVCLALLKESPFFKG---VGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 R+LD+GTGTG V + L P KG G++I ++ E A+ + N + + D Sbjct: 47 RVLDMGTGTGIVPILLKARYP--KGEHFTGLEIQEESAERARRSVAYNHLEQDITITTGD 104 Query: 157 WFSSVE----GLFDVIVSNPPYI 175 S FDV+ +NPPY+ Sbjct: 105 IKESASIYGGAFFDVVTTNPPYM 127 >gi|116326897|ref|YP_796617.1| tRNA (uracil-5-)-methyltransferase [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116329872|ref|YP_799590.1| tRNA (uracil-5-)-methyltransferase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|116119641|gb|ABJ77684.1| tRNA (uracil-5-)-methyltransferase [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116123561|gb|ABJ74832.1| tRNA (uracil-5-)-methyltransferase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 417 Score = 43.1 bits (100), Expect = 0.044, Method: Compositional matrix adjust. Identities = 29/78 (37%), Positives = 44/78 (56%), Gaps = 6/78 (7%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG-VSERFDT--LQSD 156 RIL+L G+G + +AL +S K +G + S +++ AK NA NG S F T L+++ Sbjct: 274 RILELYCGSGLIAIAL--QSKTKKWIGYEFSLNSVKQAKKNAQRNGFYSCDFKTLNLETN 331 Query: 157 WFSSVEGLFDVI-VSNPP 173 W S E L+ + NPP Sbjct: 332 WIDSEEALYSSFWIMNPP 349 >gi|269123368|ref|YP_003305945.1| methyltransferase small [Streptobacillus moniliformis DSM 12112] gi|268314694|gb|ACZ01068.1| methyltransferase small [Streptobacillus moniliformis DSM 12112] Length = 237 Score = 43.1 bits (100), Expect = 0.044, Method: Compositional matrix adjust. Identities = 27/83 (32%), Positives = 44/83 (53%), Gaps = 6/83 (7%) Query: 96 RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF----D 151 R ++L++G+G G + + +L++ + GV+I+ A I+ N N + F D Sbjct: 37 RKSKKLLEIGSGFGIISM-ILRKRTLAEITGVEINYDAYNISLENLKNNNIDNIFFINED 95 Query: 152 TLQSDWFSSVEGLFDVIVSNPPY 174 L F S E +D+IVSNPPY Sbjct: 96 ILNYRKFLS-EQTYDIIVSNPPY 117 >gi|197286343|ref|YP_002152215.1| 16S ribosomal RNA m2G1207 methyltransferase [Proteus mirabilis HI4320] gi|226712960|sp|B4EWW4|RSMC_PROMH RecName: Full=Ribosomal RNA small subunit methyltransferase C; AltName: Full=16S rRNA m2G1207 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rsmC gi|194683830|emb|CAR44934.1| ribosomal RNA small subunit methyltransferase C [Proteus mirabilis HI4320] Length = 337 Score = 43.1 bits (100), Expect = 0.044, Method: Compositional matrix adjust. Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 2/74 (2%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LD+ G G + L K++P K D++ A+ + + N + R + S+ +S+ Sbjct: 200 LLDMACGCGVIATVLGKKNPMLKLTLCDVNAAAISSSIATLNVNELEGR--VIASNVYSA 257 Query: 161 VEGLFDVIVSNPPY 174 VE +D IVSNPP+ Sbjct: 258 VEETYDWIVSNPPF 271 >gi|254828716|ref|ZP_05233403.1| conserved hypothetical protein [Listeria monocytogenes FSL N3-165] gi|258601121|gb|EEW14446.1| conserved hypothetical protein [Listeria monocytogenes FSL N3-165] Length = 201 Score = 43.1 bits (100), Expect = 0.044, Method: Compositional matrix adjust. Identities = 25/74 (33%), Positives = 39/74 (52%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 +ILD+G G G + L + K P + VD++ +ALE+AK NA N + S + + Sbjct: 62 KILDVGCGYGPMGLTVAKAFPDSQIEMVDVNLRALELAKENAGINKTTNTHIYESSVYDN 121 Query: 160 SVEGLFDVIVSNPP 173 + I+SNPP Sbjct: 122 VTANDYQAIISNPP 135 >gi|317049188|ref|YP_004116836.1| methyltransferase small [Pantoea sp. At-9b] gi|316950805|gb|ADU70280.1| methyltransferase small [Pantoea sp. At-9b] Length = 249 Score = 43.1 bits (100), Expect = 0.044, Method: Compositional matrix adjust. Identities = 24/81 (29%), Positives = 43/81 (53%), Gaps = 4/81 (4%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 V R+LD+G+G+G + L + + + + V++ A + A+ N + + R Q+D Sbjct: 49 VRRVLDIGSGSGLIALMIAQRTADEVQIDAVELDADAAQQAQENVQASPWAARVTLHQAD 108 Query: 157 ---WFSSVEGLFDVIVSNPPY 174 W + E + +IVSNPPY Sbjct: 109 IAQWADACEQRYSLIVSNPPY 129 >gi|261365025|ref|ZP_05977908.1| methyltransferase domain protein [Neisseria mucosa ATCC 25996] gi|288566614|gb|EFC88174.1| methyltransferase domain protein [Neisseria mucosa ATCC 25996] Length = 372 Score = 43.1 bits (100), Expect = 0.044, Method: Compositional matrix adjust. Identities = 32/120 (26%), Positives = 55/120 (45%), Gaps = 14/120 (11%) Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 D+GTG+G + A+L + + + D + KA+ A +N G+ ++ D F Sbjct: 197 FDIGTGSGVIA-AILAKRGISEIIATDTNPKAITCATANLARLGLDKQVVVQAVDLFP-- 253 Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221 EG D+IV NPP++ + +E +DP ++ +GV +HLN G Sbjct: 254 EGCADLIVCNPPWLPAKPTSA--VETALYDPDNAM---------LTAFLNGVRQHLNPQG 302 >gi|220907787|ref|YP_002483098.1| type 12 methyltransferase [Cyanothece sp. PCC 7425] gi|219864398|gb|ACL44737.1| Methyltransferase type 12 [Cyanothece sp. PCC 7425] Length = 240 Score = 43.1 bits (100), Expect = 0.044, Method: Compositional matrix adjust. Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 7/83 (8%) Query: 74 PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133 PR E L A+A LP + IL+LG GTG + L +L+ P K V VD S + Sbjct: 27 PRYEEML---EAIAHCLPS----ETENILELGCGTGELSLKVLQRCPGAKLVAVDYSPRM 79 Query: 134 LEIAKSNAVTNGVSERFDTLQSD 156 L A++ G+ ER +++D Sbjct: 80 LAYAQTKLTAAGLGERVTWIEAD 102 >gi|187777347|ref|ZP_02993820.1| hypothetical protein CLOSPO_00899 [Clostridium sporogenes ATCC 15579] gi|187774275|gb|EDU38077.1| hypothetical protein CLOSPO_00899 [Clostridium sporogenes ATCC 15579] Length = 246 Score = 43.1 bits (100), Expect = 0.044, Method: Compositional matrix adjust. Identities = 27/98 (27%), Positives = 49/98 (50%), Gaps = 8/98 (8%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 +D+ L + PRI+ D ++DL TGTG + L ++ +G++I + ++AK + Sbjct: 32 IDAVLLANFPRIKNGD--EVVDLCTGTGIIPFILAGKTNASNIIGIEIQKEIADMAKRSI 89 Query: 142 VTNGVSERFDTLQSD-----WFSSVEGLFDVIVSNPPY 174 N + E+ ++ D +E DV+ NPPY Sbjct: 90 KYNNLQEKVKFIEGDLKDIKLLKDIEKA-DVVTVNPPY 126 >gi|323699176|ref|ZP_08111088.1| ubiquinone/menaquinone biosynthesis methyltransferase [Desulfovibrio sp. ND132] gi|323459108|gb|EGB14973.1| ubiquinone/menaquinone biosynthesis methyltransferase [Desulfovibrio desulfuricans ND132] Length = 291 Score = 42.7 bits (99), Expect = 0.045, Method: Compositional matrix adjust. Identities = 35/104 (33%), Positives = 48/104 (46%), Gaps = 12/104 (11%) Query: 53 RILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVC 112 RI GW DF N L+ D + LV +A R E +V LDL GT V Sbjct: 28 RIAGWYDFLNHALSGGQDIYW----RYRLVRAA------RPEPGGMV--LDLAAGTMDVS 75 Query: 113 LALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 + LL++ P K +D + LE K+ + NG ER +Q+D Sbjct: 76 VELLRQYPDCKVAALDFTLPMLENGKAKKLKNGREERIFPVQAD 119 >gi|308178263|ref|YP_003917669.1| methyltransferase [Arthrobacter arilaitensis Re117] gi|307745726|emb|CBT76698.1| putative methyltransferase [Arthrobacter arilaitensis Re117] Length = 529 Score = 42.7 bits (99), Expect = 0.045, Method: Compositional matrix adjust. Identities = 32/100 (32%), Positives = 46/100 (46%), Gaps = 13/100 (13%) Query: 87 AFSLPRIEKRDVV-RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145 + +L +I R+ V R LDLGTG G LL + D+S +AL + N + N Sbjct: 158 SLTLAQITIREKVERALDLGTGCGIQLFHLLAHAQHV--TATDVSARALGFTRFNLLLNA 215 Query: 146 ---------VSERFDTLQSDWFSSVEG-LFDVIVSNPPYI 175 + R LQ F V G F++I SNPP++ Sbjct: 216 QTLNLDPKNLESRVTLLQGSLFEPVAGSTFNLIASNPPFV 255 >gi|33595778|ref|NP_883421.1| hypothetical protein BPP1102 [Bordetella parapertussis 12822] gi|33565857|emb|CAE36403.1| conserved hypothetical protein [Bordetella parapertussis] Length = 372 Score = 42.7 bits (99), Expect = 0.045, Method: Compositional matrix adjust. Identities = 35/119 (29%), Positives = 52/119 (43%), Gaps = 15/119 (12%) Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162 D+GTGTG + L + D+ +AL A N G+ R LQ+D F Sbjct: 200 DIGTGTGVLAAVLARRG--LDVTATDLDPRALACAADNLQRLGLGGRVRLLQADLFPP-- 255 Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221 G D++V NPP++ + + + D D R+ L G + GL+ HLN G Sbjct: 256 GRADLVVCNPPWLPARPSAPVEYAIYDPDSRM-LTGFLAGLAA----------HLNPGG 303 >gi|315127596|ref|YP_004069599.1| hypothetical protein PSM_A2534 [Pseudoalteromonas sp. SM9913] gi|315016110|gb|ADT69448.1| hypothetical protein PSM_A2534 [Pseudoalteromonas sp. SM9913] Length = 232 Score = 42.7 bits (99), Expect = 0.045, Method: Compositional matrix adjust. Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 6/78 (7%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG---VSERFDTLQSDW 157 +LD+GTGTG + L + +P K V++ A + A N + +S +Q Sbjct: 39 LLDIGTGTGLLALMCKQRAPHLKVSAVEVDETAYQQALQNCQQSPWRDISIYHQPIQQ-- 96 Query: 158 FSSVEGLFDVIVSNPPYI 175 F +V GLFD +++NPPY Sbjct: 97 FEAV-GLFDCVIANPPYF 113 >gi|187775821|ref|ZP_02992727.1| putative methyltransferase [Escherichia coli O157:H7 str. EC4196] gi|208807959|ref|ZP_03250296.1| putative methyltransferase [Escherichia coli O157:H7 str. EC4206] gi|187770611|gb|EDU34455.1| putative methyltransferase [Escherichia coli O157:H7 str. EC4196] gi|208727760|gb|EDZ77361.1| putative methyltransferase [Escherichia coli O157:H7 str. EC4206] gi|326340381|gb|EGD64185.1| putative methyltransferase [Escherichia coli O157:H7 str. 1125] Length = 257 Score = 42.7 bits (99), Expect = 0.045, Method: Compositional matrix adjust. Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 5/89 (5%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 V R LD+G G+G + L L + + + V++ +A A+ N + ER + +D Sbjct: 57 VKRCLDIGAGSGLLALMLAQRTSDSVIIDAVELESEAATQAQENVAQSPWLERINVHTAD 116 Query: 157 ---WFSSVEGLFDVIVSNPPYIESVIVDC 182 W + FD+I+SNPPY E V+C Sbjct: 117 IQQWVTQQTARFDLIISNPPYYEQG-VEC 144 >gi|149184033|ref|ZP_01862393.1| hypothetical protein BSG1_11471 [Bacillus sp. SG-1] gi|148848261|gb|EDL62551.1| hypothetical protein BSG1_11471 [Bacillus sp. SG-1] Length = 201 Score = 42.7 bits (99), Expect = 0.045, Method: Compositional matrix adjust. Identities = 26/74 (35%), Positives = 42/74 (56%), Gaps = 2/74 (2%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LD+G G G V L++ K P VD++ +A+ +A+ NA NG+S +S F + Sbjct: 62 LLDVGCGYGPVGLSMAKAFPERTVHMVDVNVRAIGLAEENARANGIS-NASIYESSCFKN 120 Query: 161 V-EGLFDVIVSNPP 173 V E F +++NPP Sbjct: 121 VSEKNFSAVLTNPP 134 >gi|268593258|ref|ZP_06127479.1| SAM-dependent methyltransferase [Providencia rettgeri DSM 1131] gi|291311154|gb|EFE51607.1| SAM-dependent methyltransferase [Providencia rettgeri DSM 1131] Length = 244 Score = 42.7 bits (99), Expect = 0.046, Method: Compositional matrix adjust. Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 7/88 (7%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD- 156 V +LD+G+G+G + L L + + V++ A A+ N + + ++R + D Sbjct: 45 VQSVLDIGSGSGLIALMLAQRNAMLCVDAVELDNDAAVQAQENFIESPWADRLHVINQDI 104 Query: 157 ----WFSSVEGLFDVIVSNPPYIESVIV 180 SSV+ +D+IVSNPPY E + Sbjct: 105 VSYSQLSSVQ--YDLIVSNPPYFEPAVA 130 >gi|212546153|ref|XP_002153230.1| RNA methyltransferase, putative [Penicillium marneffei ATCC 18224] gi|210064750|gb|EEA18845.1| RNA methyltransferase, putative [Penicillium marneffei ATCC 18224] Length = 362 Score = 42.7 bits (99), Expect = 0.046, Method: Compositional matrix adjust. Identities = 46/183 (25%), Positives = 77/183 (42%), Gaps = 37/183 (20%) Query: 47 KHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA--LAFSLPRIEK-RDVVRILD 103 + + + ILG + F ++ + PR ETE A + P + R +RILD Sbjct: 79 RGKPLQYILGDQPFGDLEILCQRGVLIPRAETESYTSHARDIIMKGPYAKDFRKSLRILD 138 Query: 104 LGTGTGAVCLALLKESPF----FKGVGVDISCKALEIAKSNAVTN--------------- 144 L +G+G + L L VG+D+ +A+++++ N + N Sbjct: 139 LCSGSGCISLLLHSLLASDIKDLTIVGIDVDPQAIKLSQKNKLHNIRRGLLSSRAENEVY 198 Query: 145 ------------GVSERFDTLQSDWFSS-VEGLFDVIVSNPPYI--ESVIVDCLGLEVRD 189 G S TLQS + +S +DV++SNPPYI ++I VR Sbjct: 199 FIKFDILHSIQSGNSSLMGTLQSHFHASNTNNTWDVLISNPPYISPSNLINGTTTRSVRR 258 Query: 190 FDP 192 ++P Sbjct: 259 YEP 261 >gi|332654231|ref|ZP_08419975.1| putative methyltransferase [Ruminococcaceae bacterium D16] gi|332517317|gb|EGJ46922.1| putative methyltransferase [Ruminococcaceae bacterium D16] Length = 208 Score = 42.7 bits (99), Expect = 0.046, Method: Compositional matrix adjust. Identities = 35/109 (32%), Positives = 46/109 (42%), Gaps = 3/109 (2%) Query: 67 LSSDTFEPRPETELLVDSALAFSLPRIEK-RDVVRILDLGTGTGAVCLALLKESPFFKGV 125 L E RPE L LA R R R+ DLGTG+G + L L + Sbjct: 7 LGPYQLEQRPEVFPLGSDTLALG--RFATVRKGWRVCDLGTGSGVLLLLLAARESQLELF 64 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174 G+D A +A+ N N + + T G FD++VSNPPY Sbjct: 65 GLDQDPAAAALAQDNLRHNDLEGQIWTGSWSQTPFPPGSFDLVVSNPPY 113 >gi|227498083|ref|ZP_03928256.1| methylase [Actinomyces urogenitalis DSM 15434] gi|226832521|gb|EEH64904.1| methylase [Actinomyces urogenitalis DSM 15434] Length = 220 Score = 42.7 bits (99), Expect = 0.046, Method: Compositional matrix adjust. Identities = 38/142 (26%), Positives = 68/142 (47%), Gaps = 7/142 (4%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR--DVV 99 + R E + + G F + L F RPETE++ +A+ + R+ +R Sbjct: 62 VARRTAREPLQHLTGRMWFRGLELVARPGVFIVRPETEVVAGAAIE-AAGRVAERYGRAP 120 Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN----AVTNGVSERFDTLQS 155 ++DL TG+GA+ A+ E P + GV+++ A+ A+ N + D + Sbjct: 121 VVVDLCTGSGAIAAAVAAEVPTARVTGVELADAAVAAARENCERVVPGRVRVVQADATAA 180 Query: 156 DWFSSVEGLFDVIVSNPPYIES 177 + ++G DV+VSNPPY+ + Sbjct: 181 ATLAEMDGSVDVVVSNPPYVPA 202 >gi|170077427|ref|YP_001734065.1| SAM dependent methyltransferase [Synechococcus sp. PCC 7002] gi|169885096|gb|ACA98809.1| SAM dependent methyltransferase [Synechococcus sp. PCC 7002] Length = 222 Score = 42.7 bits (99), Expect = 0.046, Method: Compositional matrix adjust. Identities = 22/78 (28%), Positives = 43/78 (55%), Gaps = 2/78 (2%) Query: 96 RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155 ++ +LDLGTGT + + L ++ P ++ G D++ L + + N V G++ + + + + Sbjct: 43 QETAFVLDLGTGTAQIPILLGQQRPQWQIKGTDLAQSMLALGQKNVVAAGLTAQIELVYA 102 Query: 156 DW--FSSVEGLFDVIVSN 171 D + FDVI+SN Sbjct: 103 DAKNLPWPDQSFDVIISN 120 >gi|268574134|ref|XP_002642044.1| Hypothetical protein CBG17981 [Caenorhabditis briggsae] Length = 259 Score = 42.7 bits (99), Expect = 0.046, Method: Compositional matrix adjust. Identities = 28/82 (34%), Positives = 38/82 (46%), Gaps = 4/82 (4%) Query: 97 DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 D V+++D+G G G + VG+DI AL+I N T + E D LQ D Sbjct: 82 DGVKLVDIGCGCGMLMTTAATLYDLKSVVGIDIDEDALKICAKNLETADIQENCDLLQMD 141 Query: 157 WFSS----VEGLFDVIVSNPPY 174 +G FDV V NPP+ Sbjct: 142 VLDPEAKLPQGEFDVAVINPPF 163 >gi|282862452|ref|ZP_06271514.1| Methyltransferase type 12 [Streptomyces sp. ACTE] gi|282562791|gb|EFB68331.1| Methyltransferase type 12 [Streptomyces sp. ACTE] Length = 508 Score = 42.7 bits (99), Expect = 0.047, Method: Compositional matrix adjust. Identities = 22/52 (42%), Positives = 32/52 (61%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 R+LDLG G G + ALLK++ F + VGVD+S +AL +A + + ER Sbjct: 299 AARVLDLGCGQGQLVQALLKDARFTEIVGVDVSMRALTVAARRLKLDRMGER 350 >gi|227894595|ref|ZP_04012400.1| methyltransferase [Lactobacillus ultunensis DSM 16047] gi|227863586|gb|EEJ71007.1| methyltransferase [Lactobacillus ultunensis DSM 16047] Length = 214 Score = 42.7 bits (99), Expect = 0.047, Method: Compositional matrix adjust. Identities = 37/147 (25%), Positives = 72/147 (48%), Gaps = 14/147 (9%) Query: 31 DDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSL 90 + Q +F T+ + +H + + D +++ T + F +++ VD + Sbjct: 12 EKNQMYFATDPNAKHDEHVVDYHV----DNVDLKFTTDAGVF-----SKMRVDYGSGVLI 62 Query: 91 PRIEKRDVVR--ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148 +++ D + ILD+GTG G + L K P K VD++ + L++AK NA N + + Sbjct: 63 KTMKEVDFPKNNILDVGTGYGPIGLFAAKFWPDKKVDMVDVNERGLKLAKQNAKVNHI-K 121 Query: 149 RFDTLQSDWFSSVEG--LFDVIVSNPP 173 + SD ++ V+ F +I++NPP Sbjct: 122 NVNIYSSDCYAQVDNDKKFGLILTNPP 148 >gi|126659753|ref|ZP_01730881.1| hypothetical protein CY0110_23346 [Cyanothece sp. CCY0110] gi|126619001|gb|EAZ89742.1| hypothetical protein CY0110_23346 [Cyanothece sp. CCY0110] Length = 241 Score = 42.7 bits (99), Expect = 0.047, Method: Compositional matrix adjust. Identities = 28/88 (31%), Positives = 48/88 (54%), Gaps = 5/88 (5%) Query: 76 PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135 P +L++D+ +A +P D +LDLG GTG + L LLK P K V +D S + ++ Sbjct: 28 PHYDLMLDTLVA-CVPI----DTRHVLDLGCGTGELSLKLLKHCPDAKIVALDYSPRMIK 82 Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEG 163 +A+S S+R +++D+ + G Sbjct: 83 MAQSKLEKTPFSDRITFIEADFGAWANG 110 >gi|1171043|sp|P43423|MTC1_BACST RecName: Full=Modification methylase BseCI; Short=M.BseCI; AltName: Full=Adenine-specific methyltransferase BseCI gi|619639|emb|CAA56041.1| methyltransferase [Geobacillus stearothermophilus] Length = 579 Score = 42.7 bits (99), Expect = 0.047, Method: Compositional matrix adjust. Identities = 42/150 (28%), Positives = 69/150 (46%), Gaps = 25/150 (16%) Query: 94 EKRDVVRILDLGTGTGAVCLALLKESPF----FKGVGVDISCKALEIAKSNAVTNGVSER 149 EK V+R+LD G G + LA+ K + + +GVD A+ IA +G + Sbjct: 40 EKNRVIRVLDPACGDGELLLAINKVAQSMNIQLELIGVDFDIDAINIANERLSRSG-HKN 98 Query: 150 FDTLQSDWFSSV-EG----LF--------DVIVSNPPYIESVIVDCLGLE-VRDFDPRIS 195 F + D+ V EG LF D+I++NPPY+ + I LG E + + + Sbjct: 99 FRLINKDFLEMVSEGDNYDLFNIEELEPVDIIIANPPYVRTQI---LGAEKAQKLREKFN 155 Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225 L G +D Y+ +++ L +G+ V Sbjct: 156 LKGRVD---LYQAFLVAMTQQLKSNGIIGV 182 >gi|148257404|ref|YP_001241989.1| 50S ribosomal protein L11P methyltransferase [Bradyrhizobium sp. BTAi1] gi|146409577|gb|ABQ38083.1| [LSU ribosomal protein L11P]-lysine N-methyltransferase [Bradyrhizobium sp. BTAi1] Length = 298 Score = 42.7 bits (99), Expect = 0.047, Method: Compositional matrix adjust. Identities = 30/96 (31%), Positives = 50/96 (52%), Gaps = 12/96 (12%) Query: 80 LLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKS 139 LL+D L +PR R+LDLGTGTG + +A K + DI ++ +A+ Sbjct: 146 LLLDHILKSRVPR-------RVLDLGTGTGVLAIAAAKAQ-HRSVLASDIDPPSVAVARE 197 Query: 140 NAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSN 171 NA NGV +++ F++ + G FD++++N Sbjct: 198 NAWLNGVGPLVRVIRATGFAAEDFAKAGPFDLVLAN 233 >gi|188533128|ref|YP_001906925.1| Putative enzyme [Erwinia tasmaniensis Et1/99] gi|188028170|emb|CAO96028.1| Putative enzyme [Erwinia tasmaniensis Et1/99] Length = 277 Score = 42.7 bits (99), Expect = 0.047, Method: Compositional matrix adjust. Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 4/81 (4%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 V R+LD+G+G+G + L L + + + V++ +A A+ N + + R Q+D Sbjct: 77 VKRVLDIGSGSGLIALMLAQRTSEPVQIDAVELDEEAATQAQENVAASPWAHRVHVQQAD 136 Query: 157 ---WFSSVEGLFDVIVSNPPY 174 W E + +IVSNPPY Sbjct: 137 VVEWAQRCEHSYSLIVSNPPY 157 >gi|84515722|ref|ZP_01003083.1| N-6 Adenine-specific DNA methylase [Loktanella vestfoldensis SKA53] gi|84510164|gb|EAQ06620.1| N-6 Adenine-specific DNA methylase [Loktanella vestfoldensis SKA53] Length = 255 Score = 42.7 bits (99), Expect = 0.047, Method: Compositional matrix adjust. Identities = 30/109 (27%), Positives = 49/109 (44%), Gaps = 8/109 (7%) Query: 72 FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131 +PR VD L + I R +L+LG G G L L + P GV++ Sbjct: 22 LQPRHGYRAGVDPVLLAA--SIAARAGQSVLELGCGVGTAALCLGRRVPGLALTGVEVQT 79 Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPYIE 176 + ++A+ NA N + + + +D + GL FD ++ NPPY + Sbjct: 80 EYADLARRNAAANDLP--LEVITADLRTLPAGLRQRRFDHVIMNPPYFD 126 >gi|319788722|ref|YP_004090037.1| methyltransferase [Ruminococcus albus 7] gi|315450589|gb|ADU24151.1| methyltransferase [Ruminococcus albus 7] Length = 182 Score = 42.7 bits (99), Expect = 0.048, Method: Compositional matrix adjust. Identities = 36/122 (29%), Positives = 62/122 (50%), Gaps = 15/122 (12%) Query: 70 DTFEPRPETELL---VDSALAFSLPRIEKRDVVRILDLGTGTGAVCL-ALLKESPFFKGV 125 DT + RP T+++ V SA+ F +P ++LDL G+G + + AL +E+ V Sbjct: 17 DTLDTRPTTDMVKEAVFSAIQFDVPG------SQVLDLFAGSGQMGIEALSREASHC--V 68 Query: 126 GVDISCKALEIAKSNAVT---NGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182 VD + A+++ K N N S + D+ +G FD+++ +PPY + +I Sbjct: 69 FVDNNPAAVQVIKENISDCKFNTESRVLNMDSLDYIKVAKGQFDIVLLDPPYGKGIIEKV 128 Query: 183 LG 184 LG Sbjct: 129 LG 130 >gi|161529283|ref|YP_001583109.1| RNA methylase [Nitrosopumilus maritimus SCM1] gi|160340584|gb|ABX13671.1| putative RNA methylase [Nitrosopumilus maritimus SCM1] Length = 315 Score = 42.7 bits (99), Expect = 0.048, Method: Compositional matrix adjust. Identities = 55/185 (29%), Positives = 88/185 (47%), Gaps = 22/185 (11%) Query: 2 QALRDSHSFLCRVTGLSSHQV-IVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60 + L+++ +F+CR+ LSS+Q I + ++ + D F +NA V+ L++ I L + + Sbjct: 79 EILKNAKTFVCRIINLSSNQFDIPELENSMGDMISKF-SNAKVK-LENPDITVYLIFTNK 136 Query: 61 YNVRLTLSSDTFEP-RPETELLVDSALAFSLPR-------IEKRDVVRILDLGTGTGAVC 112 N S T E RP+ + L + L R ++K + V D GTG Sbjct: 137 ENF-FGFSKITKEKKRPKKAISQPHELDWKLTRAMINLVGLKKGETV--CDPFCGTGTTL 193 Query: 113 LALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL---FDVIV 169 L ES G+G+D K +EI K N NG R + SD F ++ + FD IV Sbjct: 194 LEA--ESMGIHGIGLDFDEKMVEITKKNLKENGYKSR--VIHSD-FQEIKNMADEFDGIV 248 Query: 170 SNPPY 174 ++ PY Sbjct: 249 TDFPY 253 >gi|126465679|ref|YP_001040788.1| methyltransferase small [Staphylothermus marinus F1] gi|126014502|gb|ABN69880.1| methyltransferase small [Staphylothermus marinus F1] Length = 186 Score = 42.7 bits (99), Expect = 0.048, Method: Compositional matrix adjust. Identities = 33/105 (31%), Positives = 51/105 (48%), Gaps = 9/105 (8%) Query: 72 FEPRPETELLVDSALAFSLPRIEKRDVVR-ILDLGTGTGAVCLALLKESPFFKGVGVDIS 130 +EP +T LL+++ I D +DLG GTG V L LL ++ K + +DI+ Sbjct: 2 YEPSDDTWLLLET--------IRDNDYFNNCVDLGCGTGVVGLYLLSKNICSKTLFIDIN 53 Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYI 175 AL N N + D S +E F+++V+NPPY+ Sbjct: 54 PVALLNTVYNLKLNNYQHKGLVASIDNDSILENYFELVVANPPYL 98 >gi|154175164|ref|YP_001408352.1| UDP-MurNac-pentapeptide presynthetase [Campylobacter curvus 525.92] gi|112803155|gb|EAU00499.1| UDP-MurNac-pentapeptide presynthetase [Campylobacter curvus 525.92] Length = 237 Score = 42.7 bits (99), Expect = 0.048, Method: Compositional matrix adjust. Identities = 35/107 (32%), Positives = 53/107 (49%), Gaps = 9/107 (8%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGV---DISCKALEIAKSNAVTNGVSERFDTLQSDW 157 +LD+G G G + L L ++ FKG + D+ LEI++ NA NG+ + Sbjct: 35 VLDVGCGCGVLGLLLKRD---FKGASLSLLDVQDINLEISRQNARANGLEAKILNADFAG 91 Query: 158 FSSVEGLFDVIVSNPPYIESVIVDCL--GLEVRDFDPRISLDGGIDG 202 F S E FD+IVSNPP+ + L++ + +SL G I G Sbjct: 92 FKS-ETKFDLIVSNPPFYHDGVKQSAVEHLKLSRYASALSLCGFIAG 137 >gi|229512922|ref|ZP_04402389.1| predicted O-methyltransferase [Vibrio cholerae TMA 21] gi|229350171|gb|EEO15124.1| predicted O-methyltransferase [Vibrio cholerae TMA 21] Length = 240 Score = 42.7 bits (99), Expect = 0.048, Method: Compositional matrix adjust. Identities = 25/80 (31%), Positives = 37/80 (46%), Gaps = 5/80 (6%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD---W 157 ILD+G GTG + L + P +DI A + A+ N + +ER + +D W Sbjct: 46 ILDIGCGTGLLSLMCAQRFPHAHITALDIEQSAYQAAEHNRQQSPWAERIECQHADILHW 105 Query: 158 FSSVEGLFDVIVSNPPYIES 177 + F I+ NPPY S Sbjct: 106 --QLSKRFAAIICNPPYFNS 123 >gi|225468789|ref|XP_002262890.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 320 Score = 42.7 bits (99), Expect = 0.048, Method: Compositional matrix adjust. Identities = 37/139 (26%), Positives = 70/139 (50%), Gaps = 12/139 (8%) Query: 45 SLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDL 104 S+ ++ +RI R R++ + +EP ++ LVD+ LA +E + +++ Sbjct: 60 SVSYKMTYRIAQIR-----RVSSHPEVYEPCDDSFALVDALLADRTNLLEHHPAL-CMEV 113 Query: 105 GTGTGAV----CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV-SERFDT-LQSDWF 158 G G+G V L L +E+ + DI+ A+ + + +GV +E +T + S Sbjct: 114 GCGSGYVITSLALILGQEAQGIHYLATDINPHAVRVTQETLEAHGVHAELINTDIASGLE 173 Query: 159 SSVEGLFDVIVSNPPYIES 177 S+ G+ DV+V NPPY+ + Sbjct: 174 KSLAGMVDVMVVNPPYVPT 192 >gi|218710862|ref|YP_002418483.1| ribosomal protein L11 methyltransferase [Vibrio splendidus LGP32] gi|254783323|sp|B7VM52|PRMA_VIBSL RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11 Mtase gi|218323881|emb|CAV20242.1| ribosomal protein L11 methyltransferase [Vibrio splendidus LGP32] Length = 295 Score = 42.7 bits (99), Expect = 0.048, Method: Compositional matrix adjust. Identities = 36/112 (32%), Positives = 56/112 (50%), Gaps = 17/112 (15%) Query: 74 PRPET-ELLVDSALAFS----------LPRIEKRDVV--RILDLGTGTGAVCLALLKESP 120 P P+ +++D LAF L +E D+ ++D G G+G + +A +K Sbjct: 123 PEPDAVNVMLDPGLAFGTGTHPTTALCLEWLEGLDLTGKTVIDFGCGSGILAIAAIKLG- 181 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF-DVIVSN 171 K VG+DI +AL +K NA NGV+E+ + EGL DV+V+N Sbjct: 182 AAKVVGIDIDPQALLASKDNAQRNGVAEQLEVFLPQ--DQPEGLLADVVVAN 231 >gi|119718090|ref|YP_925055.1| methyltransferase small [Nocardioides sp. JS614] gi|119538751|gb|ABL83368.1| 16S rRNA m(2)G 1207 methyltransferase [Nocardioides sp. JS614] Length = 205 Score = 42.7 bits (99), Expect = 0.048, Method: Compositional matrix adjust. Identities = 29/92 (31%), Positives = 43/92 (46%), Gaps = 1/92 (1%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 +D A A E R LDLG G G + LA+ P +D++ +A+ +A NA Sbjct: 43 LDHATAVLFRETEPPVQGRFLDLGCGYGVIGLAIAAAVPLASITAIDVNDRAIALANENA 102 Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173 V RF + + + E ++D I SNPP Sbjct: 103 RAMRVDGRFVACRPEQVPTNE-VYDEIWSNPP 133 >gi|330718871|ref|ZP_08313471.1| O-methyltransferase [Leuconostoc fallax KCTC 3537] Length = 254 Score = 42.7 bits (99), Expect = 0.048, Method: Compositional matrix adjust. Identities = 30/93 (32%), Positives = 51/93 (54%), Gaps = 11/93 (11%) Query: 88 FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG--VDISCKALEIAKSNAVTNG 145 F+ P+ + R + +DLG+GTGAV L +P G+ V+I + E+++ + VTN Sbjct: 41 FAQPKGKGRGIT--VDLGSGTGAVGLLY---APKITGIVKLVEIQPELAEMSQRSIVTNH 95 Query: 146 VSERFDTLQSDW---FSSVE-GLFDVIVSNPPY 174 + ER + D F ++ G + ++SNPPY Sbjct: 96 LQERVSVVNRDMNTIFDDIKPGSVETVLSNPPY 128 >gi|269978122|ref|ZP_06185072.1| 16S rRNA m2G1207 methyltransferase [Mobiluncus mulieris 28-1] gi|269933631|gb|EEZ90215.1| 16S rRNA m2G1207 methyltransferase [Mobiluncus mulieris 28-1] Length = 272 Score = 42.7 bits (99), Expect = 0.048, Method: Compositional matrix adjust. Identities = 25/85 (29%), Positives = 47/85 (55%), Gaps = 3/85 (3%) Query: 90 LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 +P++ + V +D+G G G + L + ++ P + V VD++ +AL++ NA NG+ Sbjct: 122 VPKLPEGGV--FVDVGCGWGPLSLVMARQRPAARVVAVDVNARALDLTAKNARENGLGNL 179 Query: 150 FDTLQSDWFSSV-EGLFDVIVSNPP 173 ++ + + +G DVI SNPP Sbjct: 180 EVLAETAALAQLADGSVDVIWSNPP 204 >gi|209762802|gb|ACI79713.1| putative enzyme [Escherichia coli] gi|209762806|gb|ACI79715.1| putative enzyme [Escherichia coli] Length = 285 Score = 42.7 bits (99), Expect = 0.048, Method: Compositional matrix adjust. Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 5/89 (5%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 V R LD+G G+G + L L + + + V++ +A A+ N + ER + +D Sbjct: 85 VKRCLDIGAGSGLLALMLAQRTSDSVIIDAVELESEAATQAQENVAQSPWLERINVHTAD 144 Query: 157 ---WFSSVEGLFDVIVSNPPYIESVIVDC 182 W + FD+I+SNPPY E V+C Sbjct: 145 IQQWVTQQTARFDLIISNPPYYEQG-VEC 172 >gi|227500739|ref|ZP_03930788.1| methylase of polypeptide chain release factor family protein [Anaerococcus tetradius ATCC 35098] gi|227217146|gb|EEI82499.1| methylase of polypeptide chain release factor family protein [Anaerococcus tetradius ATCC 35098] Length = 455 Score = 42.7 bits (99), Expect = 0.048, Method: Compositional matrix adjust. Identities = 31/123 (25%), Positives = 59/123 (47%), Gaps = 13/123 (10%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LDL +GTG + K + K + ++I+ KA+ I + N N + + + + + ++ Sbjct: 152 VLDLCSGTGIQGMIAAKSAK--KVISIEINPKAVNICRLNIFLNKLDKIIELRKGNLYNC 209 Query: 161 VEG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 + FD I +NPP+I + + I DGG DG + I +G++ +L Sbjct: 210 LNSNEKFDYIYANPPFIPMA---------KYIEYPICGDGGEDGTVILKKITEGLNEYLK 260 Query: 219 KDG 221 +G Sbjct: 261 DNG 263 >gi|145495362|ref|XP_001433674.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124400793|emb|CAK66277.1| unnamed protein product [Paramecium tetraurelia] Length = 256 Score = 42.7 bits (99), Expect = 0.048, Method: Compositional matrix adjust. Identities = 30/83 (36%), Positives = 44/83 (53%), Gaps = 5/83 (6%) Query: 93 IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152 I K + +I D+GTG V + L +KG+GVD S +A+ A+S A +N + F Sbjct: 92 ISKFPITKIYDVGTGFSGVLIFLAYRLYGWKGIGVDTSEQAINHARSIAQSNHIECEFKV 151 Query: 153 LQSDWFSSVE-GLFDVIVSNPPY 174 D F +E G+ V V NPP+ Sbjct: 152 --GDLFQFLEDGM--VTVCNPPF 170 >gi|295688726|ref|YP_003592419.1| putative RNA methylase [Caulobacter segnis ATCC 21756] gi|295430629|gb|ADG09801.1| putative RNA methylase [Caulobacter segnis ATCC 21756] Length = 219 Score = 42.7 bits (99), Expect = 0.049, Method: Compositional matrix adjust. Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 4/81 (4%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+L+ G G G LA P GV+ A +A NA N +SER L+ D + Sbjct: 17 RVLEPGCGVGGALLAAATRRPGVIFQGVERDSLAASLATENAALNDLSERVAILEGDVEA 76 Query: 160 SVEGL----FDVIVSNPPYIE 176 L FD +++NPP+ + Sbjct: 77 GFRALGLPAFDAVMTNPPFFD 97 >gi|227875232|ref|ZP_03993374.1| possible 16S rRNA methyltransferase [Mobiluncus mulieris ATCC 35243] gi|227844137|gb|EEJ54304.1| possible 16S rRNA methyltransferase [Mobiluncus mulieris ATCC 35243] Length = 282 Score = 42.7 bits (99), Expect = 0.049, Method: Compositional matrix adjust. Identities = 25/85 (29%), Positives = 47/85 (55%), Gaps = 3/85 (3%) Query: 90 LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 +P++ + V +D+G G G + L + ++ P + V VD++ +AL++ NA NG+ Sbjct: 132 VPKLPEGGV--FVDVGCGWGPLSLVMARQRPAARVVAVDVNARALDLTAKNARENGLGNL 189 Query: 150 FDTLQSDWFSSV-EGLFDVIVSNPP 173 ++ + + +G DVI SNPP Sbjct: 190 EVLAETAALAQLADGSVDVIWSNPP 214 >gi|320457825|dbj|BAJ68446.1| conserved hypothetical protein [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 187 Score = 42.7 bits (99), Expect = 0.049, Method: Compositional matrix adjust. Identities = 33/86 (38%), Positives = 42/86 (48%), Gaps = 14/86 (16%) Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG--------VSERFDTL 153 LDLG G G + L L ESP VD++ +AL++ +NA NG V E L Sbjct: 32 LDLGCGWGPIALTLAFESPEANVWAVDVNERALDLTHANAQANGRTNIHTAQVDESSTPL 91 Query: 154 ----QSDWFSSVEG--LFDVIVSNPP 173 Q + +V G FDVI SNPP Sbjct: 92 PAENQPAFCETVPGDLTFDVIWSNPP 117 >gi|320539410|ref|ZP_08039079.1| methylase for 50S ribosomal subunit protein L11 [Serratia symbiotica str. Tucson] gi|320030535|gb|EFW12545.1| methylase for 50S ribosomal subunit protein L11 [Serratia symbiotica str. Tucson] Length = 293 Score = 42.7 bits (99), Expect = 0.050, Method: Compositional matrix adjust. Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 4/72 (5%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159 ++D G G+G + +A LK + +G+DI +A++ ++ NA NGVSER L +D Sbjct: 162 VIDFGCGSGILAIAALKLG-AERAIGIDIDPQAIQASRDNAQRNGVSERLALYLPND--Q 218 Query: 160 SVEGLFDVIVSN 171 E L DV+V+N Sbjct: 219 PAELLADVVVAN 230 >gi|320006967|gb|ADW01817.1| UbiE/COQ5 methyltransferase [Streptomyces flavogriseus ATCC 33331] Length = 244 Score = 42.7 bits (99), Expect = 0.050, Method: Compositional matrix adjust. Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 2/60 (3%) Query: 81 LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140 L+ SA LPR + +R+LDLG GTGA ALL+ +P+ + VD S LE A++ Sbjct: 34 LLRSAHRLRLPRGGR--GLRLLDLGCGTGASTRALLRAAPYARITAVDASAGMLERARAK 91 >gi|144899240|emb|CAM76104.1| Ribosomal L11 methyltransferase [Magnetospirillum gryphiswaldense MSR-1] Length = 299 Score = 42.7 bits (99), Expect = 0.050, Method: Compositional matrix adjust. Identities = 37/116 (31%), Positives = 57/116 (49%), Gaps = 19/116 (16%) Query: 74 PRPETELLVDSALAFS----------LPRIEK----RDVVRILDLGTGTGAVCLALLKES 119 P ELLVD+ AF L ++K R + LDLG G+G + + + K Sbjct: 122 PTGRIELLVDAGTAFGSGEHATTRGCLTMLDKLGKRRRFLHPLDLGAGSGILGIGMAKMW 181 Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS---VEGL-FDVIVSN 171 + DI A+++A +NA NGV RF ++ SD + + +G FD+IV+N Sbjct: 182 AV-DVLATDIDPSAVKVAANNARMNGVGSRFTSVVSDGYRNRALKQGQPFDIIVAN 236 >gi|91776075|ref|YP_545831.1| methyltransferase small [Methylobacillus flagellatus KT] gi|91710062|gb|ABE49990.1| methyltransferase small [Methylobacillus flagellatus KT] Length = 368 Score = 42.7 bits (99), Expect = 0.050, Method: Compositional matrix adjust. Identities = 36/125 (28%), Positives = 55/125 (44%), Gaps = 14/125 (11%) Query: 97 DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 D + D+GTG+G V A+L + K + D +AL A+ N G+ + + L + Sbjct: 189 DKMLAFDIGTGSG-VLAAVLAKRGVQKVIATDQDARALACARENMQRLGLEAQVEVLSCN 247 Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216 F G +IV NPP+I + +E +DP ++ G G GVS H Sbjct: 248 LFPP--GKAPLIVCNPPWIPAKA--NAPIEYAIYDPASTMLKGFLG---------GVSAH 294 Query: 217 LNKDG 221 L G Sbjct: 295 LTPGG 299 >gi|33600304|ref|NP_887864.1| hypothetical protein BB1318 [Bordetella bronchiseptica RB50] gi|33567903|emb|CAE31816.1| conserved hypothetical protein [Bordetella bronchiseptica RB50] Length = 372 Score = 42.7 bits (99), Expect = 0.050, Method: Compositional matrix adjust. Identities = 35/119 (29%), Positives = 52/119 (43%), Gaps = 15/119 (12%) Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162 D+GTGTG + L + D+ +AL A N G+ R LQ+D F Sbjct: 200 DIGTGTGVLAAVLARRG--LDVTATDLDPRALACAADNLQRLGLGGRVRLLQADLFPP-- 255 Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221 G D++V NPP++ + + + D D R+ L G + GL+ HLN G Sbjct: 256 GRADLVVCNPPWLPARPSAPVEYAIYDPDSRM-LTGFLAGLAA----------HLNPGG 303 >gi|304412070|ref|ZP_07393680.1| Methyltransferase type 11 [Shewanella baltica OS183] gi|307305965|ref|ZP_07585711.1| Methyltransferase type 11 [Shewanella baltica BA175] gi|304349620|gb|EFM14028.1| Methyltransferase type 11 [Shewanella baltica OS183] gi|306911458|gb|EFN41884.1| Methyltransferase type 11 [Shewanella baltica BA175] Length = 243 Score = 42.7 bits (99), Expect = 0.050, Method: Compositional matrix adjust. Identities = 36/114 (31%), Positives = 54/114 (47%), Gaps = 13/114 (11%) Query: 60 FYN--VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117 F+N ++ S+ E E + L D+ LP + + R+LDLG G G C Sbjct: 11 FFNEYAKMPRSTGGLESAGEWQALRDN-----LPELRGK---RVLDLGCGYGWHC-QYAA 61 Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSN 171 E VG+DIS K LE A+ + V R++ + F S G FDV++S+ Sbjct: 62 EQGAAAVVGIDISAKMLEKARELTTADNV--RYENTAIEDFESPSGAFDVVLSS 113 >gi|302024399|ref|ZP_07249610.1| type I restriction-modification system, M subunit [Streptococcus suis 05HAS68] gi|330833400|ref|YP_004402225.1| type I restriction-modification system, M subunit [Streptococcus suis ST3] gi|329307623|gb|AEB82039.1| type I restriction-modification system, M subunit [Streptococcus suis ST3] Length = 529 Score = 42.7 bits (99), Expect = 0.050, Method: Compositional matrix adjust. Identities = 30/99 (30%), Positives = 47/99 (47%), Gaps = 17/99 (17%) Query: 93 IEKRDV-VRILDLGTGTGAVCLALLKESP---FFKGVGVDISCKALEIAKSNAVTNGVS- 147 +EK D + D G+G++ L + E P K G +++ +A+ N + + VS Sbjct: 221 LEKSDTSFSVYDPTMGSGSLLLTVRNELPQGQHIKFYGQEMNTTTYNLARMNLMMHQVSY 280 Query: 148 -----ERFDTLQSDWFSSVEGL-------FDVIVSNPPY 174 DTL+SDW V+ L FD +V+NPPY Sbjct: 281 SNMILNNADTLESDWPDGVDELGIDQPRSFDAVVANPPY 319 >gi|121716649|ref|XP_001275870.1| TAM domain methyltransferase, putative [Aspergillus clavatus NRRL 1] gi|119404027|gb|EAW14444.1| TAM domain methyltransferase, putative [Aspergillus clavatus NRRL 1] Length = 335 Score = 42.7 bits (99), Expect = 0.050, Method: Compositional matrix adjust. Identities = 28/71 (39%), Positives = 35/71 (49%), Gaps = 5/71 (7%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 RILD+GTGTG L + + P + VG D+S A N V N D +SDW Sbjct: 100 RILDVGTGTGIWALEMADDFPDAEIVGTDLSPIQPSWAPPNCVFN-----VDDAESDWTF 154 Query: 160 SVEGLFDVIVS 170 + E FD I S Sbjct: 155 TPEEAFDYIHS 165 >gi|15803102|ref|NP_289133.1| putative enzyme [Escherichia coli O157:H7 EDL933] gi|15832695|ref|NP_311468.1| hypothetical protein ECs3441 [Escherichia coli O157:H7 str. Sakai] gi|291283851|ref|YP_003500669.1| hypothetical protein G2583_3157 [Escherichia coli O55:H7 str. CB9615] gi|12516996|gb|AAG57691.1|AE005488_2 putative enzyme [Escherichia coli O157:H7 str. EDL933] gi|13362912|dbj|BAB36864.1| putative enzyme [Escherichia coli O157:H7 str. Sakai] gi|209762798|gb|ACI79711.1| putative enzyme [Escherichia coli] gi|209762800|gb|ACI79712.1| putative enzyme [Escherichia coli] gi|209762804|gb|ACI79714.1| putative enzyme [Escherichia coli] gi|290763724|gb|ADD57685.1| Putative enzyme [Escherichia coli O55:H7 str. CB9615] Length = 285 Score = 42.7 bits (99), Expect = 0.050, Method: Compositional matrix adjust. Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 5/89 (5%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 V R LD+G G+G + L L + + + V++ +A A+ N + ER + +D Sbjct: 85 VKRCLDIGAGSGLLALMLAQRTSDSVIIDAVELESEAATQAQENVAQSPWLERINVHTAD 144 Query: 157 ---WFSSVEGLFDVIVSNPPYIESVIVDC 182 W + FD+I+SNPPY E V+C Sbjct: 145 IQQWVTQQTARFDLIISNPPYYEQG-VEC 172 >gi|319440181|ref|ZP_07989337.1| putative RNA methyltransferase [Corynebacterium variabile DSM 44702] Length = 380 Score = 42.7 bits (99), Expect = 0.050, Method: Compositional matrix adjust. Identities = 38/131 (29%), Positives = 61/131 (46%), Gaps = 16/131 (12%) Query: 72 FEP-RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130 F P R E LVD A LP ++ +L+LGTGTG V A+L + D++ Sbjct: 163 FSPTRSEYVDLVDDVAAAFLPSLKA--GASVLELGTGTG-VLAAVLARRGAVRVTATDVN 219 Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVE------------GLFDVIVSNPPYIESV 178 +A+ A++N GV ER + +++D + +V D++V NPP++ Sbjct: 220 PRAVACARANLDRLGVGERCEVVEADLWPAVSETTETTDAADAADAADIVVFNPPWLPGT 279 Query: 179 IVDCLGLEVRD 189 L L + D Sbjct: 280 PTSELELGIYD 290 >gi|293194295|ref|ZP_06609981.1| transferase [Actinomyces odontolyticus F0309] gi|292819742|gb|EFF78756.1| transferase [Actinomyces odontolyticus F0309] Length = 563 Score = 42.7 bits (99), Expect = 0.050, Method: Compositional matrix adjust. Identities = 44/162 (27%), Positives = 76/162 (46%), Gaps = 18/162 (11%) Query: 95 KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154 + V LD+G G G L L + + V D+S +A + + NA N D + Sbjct: 216 REQVDSALDVGCGCGIQALYLATHAD--RVVATDLSSRACALTQFNAALN--EAVIDVRE 271 Query: 155 SDWFSSVEG-LFDVIVSNPPYI---ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210 F VEG FD+IV+NPP++ +SV LE R DGG+D + R + Sbjct: 272 GSLFEPVEGETFDLIVTNPPFVITPDSVRGASGLLEYR--------DGGMDRDNLIRAVL 323 Query: 211 DGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKD 252 G +N+ G ++++ N ++ R +++ + V+++ D Sbjct: 324 RGAPACMNEGG--TLQMLANWEIPADRNPDTQWSWRVDSWLD 363 >gi|254392232|ref|ZP_05007418.1| N-methyl-transferase [Streptomyces clavuligerus ATCC 27064] gi|197705905|gb|EDY51717.1| N-methyl-transferase [Streptomyces clavuligerus ATCC 27064] Length = 229 Score = 42.7 bits (99), Expect = 0.050, Method: Compositional matrix adjust. Identities = 45/144 (31%), Positives = 65/144 (45%), Gaps = 21/144 (14%) Query: 102 LDLGTGTG--AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 L++G GTG AV AL S +DI+ KA+ +NA +GVS+R L SD ++ Sbjct: 65 LEVGCGTGVIAVTAAL---SGCTSVTALDINEKAIANTVANAERHGVSDRVRALHSDMYT 121 Query: 160 SVEGL--FDVIVSNPP--YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215 ++ FD I N P Y+E L FDP G G + Y G Sbjct: 122 ALAPTDRFDTIFWNVPWTYVEDGYALSTDLHTAVFDP------GYRGQARYLA---GAHE 172 Query: 216 HLNKDG---LCSVEIGYNQKVDVV 236 HL G L + ++G +++D V Sbjct: 173 HLADGGRLLLGTADLGDRERLDAV 196 >gi|325267815|ref|ZP_08134465.1| methyltransferase [Kingella denitrificans ATCC 33394] gi|324980696|gb|EGC16358.1| methyltransferase [Kingella denitrificans ATCC 33394] Length = 367 Score = 42.7 bits (99), Expect = 0.051, Method: Compositional matrix adjust. Identities = 45/166 (27%), Positives = 66/166 (39%), Gaps = 22/166 (13%) Query: 57 WRDFYNVRLTLSSDTFEP-RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL 115 W D + + F P R E LV A A S R +D+GTG+G + L Sbjct: 154 WMDALQANIHVPFGVFSPIRGEYVELVRQAAAQSQART-------AMDIGTGSGVLAAML 206 Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYI 175 K S D + +A+ A N G+S R D F++ D+IV NPP++ Sbjct: 207 AKHSAACI-TATDNNPRAVACATDNIARLGLSSRVRVQMQDLFANESA--DLIVCNPPWL 263 Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221 + +E +DP ++ + L H RHLN G Sbjct: 264 PARPTS--AIETALYDPDHAM---LHALLH------NAGRHLNDGG 298 >gi|269964516|ref|ZP_06178756.1| hypothetical protein VMC_01860 [Vibrio alginolyticus 40B] gi|269830753|gb|EEZ84972.1| hypothetical protein VMC_01860 [Vibrio alginolyticus 40B] Length = 239 Score = 42.7 bits (99), Expect = 0.051, Method: Compositional matrix adjust. Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 1/86 (1%) Query: 93 IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152 I+ + +ILD+GTGTG + L + + VDI A+ A+ N + S+R Sbjct: 38 IQSPNDAKILDIGTGTGLLALMCAQRFTEAQITAVDIELTAVAAAQKNMAQSPWSDRVSV 97 Query: 153 LQSDWFS-SVEGLFDVIVSNPPYIES 177 +D + F I+ NPPY S Sbjct: 98 HHTDILHFTPTHPFQRIICNPPYFNS 123 >gi|239815338|ref|YP_002944248.1| TetR family transcriptional regulator [Variovorax paradoxus S110] gi|239801915|gb|ACS18982.1| transcriptional regulator, TetR family [Variovorax paradoxus S110] Length = 204 Score = 42.7 bits (99), Expect = 0.051, Method: Compositional matrix adjust. Identities = 32/105 (30%), Positives = 47/105 (44%), Gaps = 6/105 (5%) Query: 133 ALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIESVIVDCLGLEVR 188 AL A S VSE FD Q W + VE FD + +P + ++ V+ LGL + Sbjct: 70 ALYEAASKLALRAVSEAFDPAQ-PWHAQVERAITAYFDYLAQDPALLRTLFVEILGLGMP 128 Query: 189 DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233 R ++G I G I +G + HL + +V G N+ V Sbjct: 129 GLAARRRVNGEIAGFIQ-AAINNGPAAHLTSEMAMTVVGGINELV 172 >gi|327438261|dbj|BAK14626.1| 16S RNA G1207 methylase RsmC [Solibacillus silvestris StLB046] Length = 200 Score = 42.7 bits (99), Expect = 0.051, Method: Compositional matrix adjust. Identities = 33/121 (27%), Positives = 62/121 (51%), Gaps = 16/121 (13%) Query: 64 RLTLSSDTFEPRPETELLVDSAL---------AFSLPRIEKRDVVRILDLGTGTGAVCLA 114 + TL +TF +T + S + F +P+I+ +LD+G G G + L+ Sbjct: 20 KFTLLGNTFTFETDTGVFSKSEVDFGSRVLIDVFEMPKIDGV----LLDVGCGYGPIGLS 75 Query: 115 LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDV--IVSNP 172 + K +P + +DI+ +A+ +++ NA NGV + +SD ++VE V +++NP Sbjct: 76 IAKNNPDREIYMMDINSRAVSLSQKNAQLNGV-QNVRIFESDGLAAVEPGTKVAAVLTNP 134 Query: 173 P 173 P Sbjct: 135 P 135 >gi|326316088|ref|YP_004233760.1| methyltransferase small [Acidovorax avenae subsp. avenae ATCC 19860] gi|323372924|gb|ADX45193.1| methyltransferase small [Acidovorax avenae subsp. avenae ATCC 19860] Length = 388 Score = 42.7 bits (99), Expect = 0.051, Method: Compositional matrix adjust. Identities = 36/119 (30%), Positives = 51/119 (42%), Gaps = 14/119 (11%) Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162 D+GTGTG V A+L + V D +AL A+ N V D LQ+D F Sbjct: 215 DIGTGTG-VLAAVLARRGVRRVVATDQDPRALACARENLQRLRVLPAVDILQADLFPP-- 271 Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221 G ++V NPP++ + + V D D R+ R G++ HL DG Sbjct: 272 GRAPLVVCNPPWVPARAAAPVERAVYDEDSRM-----------LRGFLGGLAGHLEPDG 319 >gi|260433423|ref|ZP_05787394.1| SAM-dependent methyltransferase [Silicibacter lacuscaerulensis ITI-1157] gi|260417251|gb|EEX10510.1| SAM-dependent methyltransferase [Silicibacter lacuscaerulensis ITI-1157] Length = 402 Score = 42.7 bits (99), Expect = 0.051, Method: Compositional matrix adjust. Identities = 40/150 (26%), Positives = 63/150 (42%), Gaps = 27/150 (18%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 +LD+ + G LA+L + VD S AL +A+ AV +G +RF+T Q D F Sbjct: 230 AHVLDVFSHVGGFGLAMLAGG-ADHALSVDGSAAALTLAEQGAVASGFGDRFETRQGDAF 288 Query: 159 SSVEGL------FDVIVSNPPYIESVIVDCLGLEVRDFDP-RISLDGGIDGLSHYRTIAD 211 + L FDV++ +PP F P + +LD G+ +A Sbjct: 289 DVLTQLGEAGAQFDVVICDPPA---------------FAPSKQALDAGLRAYERIARLAA 333 Query: 212 GVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 + + GLCS + D+ R E+ Sbjct: 334 PLVKPGGYLGLCSC----SHAADLARFREA 359 >gi|229525314|ref|ZP_04414719.1| predicted O-methyltransferase [Vibrio cholerae bv. albensis VL426] gi|229338895|gb|EEO03912.1| predicted O-methyltransferase [Vibrio cholerae bv. albensis VL426] Length = 240 Score = 42.7 bits (99), Expect = 0.051, Method: Compositional matrix adjust. Identities = 26/80 (32%), Positives = 37/80 (46%), Gaps = 5/80 (6%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD---W 157 ILD+G GTG + L + P +DI A + A+ N + +ER + +D W Sbjct: 46 ILDIGCGTGLLSLMCAQRFPHAHITALDIEQSAYQAAEHNRQQSPWAERIECKHADILHW 105 Query: 158 FSSVEGLFDVIVSNPPYIES 177 S F I+ NPPY S Sbjct: 106 QPSER--FAAIICNPPYFNS 123 >gi|224223723|gb|ACN39738.1| SibO [Streptosporangium sibiricum] Length = 245 Score = 42.7 bits (99), Expect = 0.051, Method: Compositional matrix adjust. Identities = 34/104 (32%), Positives = 53/104 (50%), Gaps = 7/104 (6%) Query: 98 VVRILDLGTGTG-AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 V +L++G G G A L L P + +DI+ A+ A+ NA +GV++R L SD Sbjct: 59 VHSMLEMGCGCGVAAVLGALAGVP--RVTALDINPAAVRTAQLNAERHGVADRVTALVSD 116 Query: 157 WFSSV--EGLFDVIVSNPPYIESVIVDCL--GLEVRDFDPRISL 196 FS+V + +D+I N P+I+ L L FDP ++ Sbjct: 117 LFSAVPEDTAYDLIFWNSPFIQVPADHALDSDLAYHFFDPGYTM 160 >gi|332362852|gb|EGJ40645.1| ribosomal RNA small subunit methyltransferase D [Streptococcus sanguinis SK49] Length = 182 Score = 42.7 bits (99), Expect = 0.052, Method: Compositional matrix adjust. Identities = 36/131 (27%), Positives = 58/131 (44%), Gaps = 16/131 (12%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+LDL G+G++ + + V V+ +A I N ERFD L+ + Sbjct: 47 RVLDLYAGSGSLAIEAISRG-METAVLVEKDRRAQAIISENIQMTKEPERFDLLKMESGQ 105 Query: 160 SVE---GLFDVIVSNPPYI-ESVIVDCLGLEVRDF-----------DPRISLDGGIDGLS 204 S+E G FD+++ +PPY E ++ D LE R D + L I GL Sbjct: 106 SLEILTGAFDLVLLDPPYAKEQIVADLEKLEERQLLSQDVLVVCETDKEVELPEEIAGLG 165 Query: 205 HYRTIADGVSR 215 ++ G+S+ Sbjct: 166 IWKQKIYGISK 176 >gi|221640206|ref|YP_002526468.1| methyltransferase small [Rhodobacter sphaeroides KD131] gi|221160987|gb|ACM01967.1| Methyltransferase small [Rhodobacter sphaeroides KD131] Length = 253 Score = 42.7 bits (99), Expect = 0.052, Method: Compositional matrix adjust. Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 7/81 (8%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +L+LG G G L L P + G+++ +A+ NA NGV+ + ++ D S+ Sbjct: 47 VLELGCGAGVASLCLAARVPGLRLAGLELQPAYAALARENAAMNGVA--LEVVEGD-LSA 103 Query: 161 VEGL----FDVIVSNPPYIES 177 + + FD +++NPPY + Sbjct: 104 MPAVLRRSFDHVIANPPYYPA 124 >gi|154508469|ref|ZP_02044111.1| hypothetical protein ACTODO_00969 [Actinomyces odontolyticus ATCC 17982] gi|153798103|gb|EDN80523.1| hypothetical protein ACTODO_00969 [Actinomyces odontolyticus ATCC 17982] Length = 563 Score = 42.7 bits (99), Expect = 0.052, Method: Compositional matrix adjust. Identities = 44/162 (27%), Positives = 75/162 (46%), Gaps = 18/162 (11%) Query: 95 KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154 + V LD+G G G L L + + V D+S +A + + NA N D + Sbjct: 216 REQVDSALDVGCGCGIQALYLATHAD--RVVATDLSSRACALTQFNAALN--EAVIDVRE 271 Query: 155 SDWFSSVEG-LFDVIVSNPPYI---ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210 F VEG FD+IV+NPP++ +SV LE R DGG+D + R + Sbjct: 272 GSLFEPVEGETFDLIVTNPPFVITPDSVRGAAGLLEYR--------DGGMDRDNLIRAVL 323 Query: 211 DGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKD 252 G +N G ++++ N ++ R +++ + V+++ D Sbjct: 324 RGAPACMNAGG--TLQMLANWEIPADRNPDTQWSWRVDSWLD 363 >gi|145640384|ref|ZP_01795968.1| predicted O-methyltransferase [Haemophilus influenzae R3021] gi|145274970|gb|EDK14832.1| predicted O-methyltransferase [Haemophilus influenzae 22.4-21] Length = 232 Score = 42.7 bits (99), Expect = 0.052, Method: Compositional matrix adjust. Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 4/84 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD--- 156 ILD+G+GTG + L L + + + V++ A + A+ N + R +Q+D Sbjct: 39 ILDMGSGTGLLALMLAQRTEENCQIQAVELDPIAAKQAQDNINNSVWKNRIQLIQTDIQH 98 Query: 157 WFSSVEGLFDVIVSNPPYIESVIV 180 + E FD+IV+NPPY E I Sbjct: 99 FLQPTEQTFDLIVANPPYFEQGIA 122 >gi|146323517|ref|XP_754131.2| TAM domain methyltransferase [Aspergillus fumigatus Af293] gi|129558251|gb|EAL92093.2| TAM domain methyltransferase, putative [Aspergillus fumigatus Af293] Length = 336 Score = 42.7 bits (99), Expect = 0.052, Method: Compositional matrix adjust. Identities = 25/62 (40%), Positives = 32/62 (51%), Gaps = 5/62 (8%) Query: 96 RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155 RDV RILDLGTGTG + + E P K +G D+S + V +S D +S Sbjct: 100 RDVSRILDLGTGTGIWAIEMADEFPTAKVIGNDLSP-----IQPTWVPPNLSFEVDDFES 154 Query: 156 DW 157 DW Sbjct: 155 DW 156 >gi|309357303|emb|CAP35511.2| hypothetical protein CBG_17981 [Caenorhabditis briggsae AF16] Length = 224 Score = 42.7 bits (99), Expect = 0.052, Method: Compositional matrix adjust. Identities = 28/82 (34%), Positives = 38/82 (46%), Gaps = 4/82 (4%) Query: 97 DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 D V+++D+G G G + VG+DI AL+I N T + E D LQ D Sbjct: 47 DGVKLVDIGCGCGMLMTTAATLYDLKSVVGIDIDEDALKICAKNLETADIQENCDLLQMD 106 Query: 157 WFSS----VEGLFDVIVSNPPY 174 +G FDV V NPP+ Sbjct: 107 VLDPEAKLPQGEFDVAVINPPF 128 >gi|309778357|ref|ZP_07673282.1| methyltransferase domain protein [Erysipelotrichaceae bacterium 3_1_53] gi|308913888|gb|EFP59703.1| methyltransferase domain protein [Erysipelotrichaceae bacterium 3_1_53] Length = 203 Score = 42.7 bits (99), Expect = 0.052, Method: Compositional matrix adjust. Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 3/75 (4%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LD+G G G V + K P + VD++ +A+E+AK NA N + SD + Sbjct: 62 QLLDMGCGYGVVGIVAKKAWPDKQVEMVDVNPRAVELAKDNAEKNNIEANIHV--SDVYE 119 Query: 160 SVEG-LFDVIVSNPP 173 V G F I++NPP Sbjct: 120 QVSGNTFTDIITNPP 134 >gi|269217822|ref|ZP_06161676.1| methyltransferase domain protein [Actinomyces sp. oral taxon 848 str. F0332] gi|269212757|gb|EEZ79097.1| methyltransferase domain protein [Actinomyces sp. oral taxon 848 str. F0332] Length = 242 Score = 42.7 bits (99), Expect = 0.052, Method: Compositional matrix adjust. Identities = 31/83 (37%), Positives = 41/83 (49%), Gaps = 8/83 (9%) Query: 97 DVVRILDLGTGTGAVCLALLKESPFFKGVGVDI------SCKALEIAKSNAVTNGVSERF 150 DV RILDLG G GAV + + P K G+D+ S E A +NA NGV R Sbjct: 82 DVERILDLGCGRGAVIVMAAQRFPEAKLTGIDLWRKSDQSGNGEEAATANAKANGVDSRI 141 Query: 151 DTLQSDW--FSSVEGLFDVIVSN 171 D + D +G FD+I ++ Sbjct: 142 DFVTGDMTKLPFEDGSFDLITAS 164 >gi|265763915|ref|ZP_06092483.1| conserved hypothetical protein [Bacteroides sp. 2_1_16] gi|263256523|gb|EEZ27869.1| conserved hypothetical protein [Bacteroides sp. 2_1_16] Length = 237 Score = 42.7 bits (99), Expect = 0.052, Method: Compositional matrix adjust. Identities = 45/151 (29%), Positives = 68/151 (45%), Gaps = 14/151 (9%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW- 157 RILD+GTGTG V L +L + + ++I KA + A N + R + + D+ Sbjct: 39 ARILDIGTGTGLVAL-MLAQRCSASVIALEIDGKAAQQAAENITRSPWGSRIEVVCQDFR 97 Query: 158 -FSSVEG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214 +S+ +D IVSNPPY D L D + + D LS Y + GVS Sbjct: 98 LYSNKNNSLKYDTIVSNPPY----FTDSLKCP----DSQRNTARHNDNLS-YEELLKGVS 148 Query: 215 RHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245 L+ +G +V I + I S+ L+ Sbjct: 149 NLLSPNGTFTVVIPMDASDSFKDIASSQGLY 179 >gi|223934049|ref|ZP_03626001.1| type I restriction-modification system, M subunit [Streptococcus suis 89/1591] gi|223897276|gb|EEF63685.1| type I restriction-modification system, M subunit [Streptococcus suis 89/1591] Length = 529 Score = 42.7 bits (99), Expect = 0.052, Method: Compositional matrix adjust. Identities = 30/99 (30%), Positives = 47/99 (47%), Gaps = 17/99 (17%) Query: 93 IEKRDV-VRILDLGTGTGAVCLALLKESP---FFKGVGVDISCKALEIAKSNAVTNGVS- 147 +EK D + D G+G++ L + E P K G +++ +A+ N + + VS Sbjct: 221 LEKSDTSFSVYDPTMGSGSLLLTVRNELPQGQHIKFYGQEMNTTTYNLARMNLMMHQVSY 280 Query: 148 -----ERFDTLQSDWFSSVEGL-------FDVIVSNPPY 174 DTL+SDW V+ L FD +V+NPPY Sbjct: 281 SNMILNNADTLESDWPDGVDELGIDQPRSFDAVVANPPY 319 >gi|325680236|ref|ZP_08159798.1| type I restriction-modification system, M subunit [Ruminococcus albus 8] gi|324108053|gb|EGC02307.1| type I restriction-modification system, M subunit [Ruminococcus albus 8] Length = 875 Score = 42.7 bits (99), Expect = 0.053, Method: Composition-based stats. Identities = 35/127 (27%), Positives = 60/127 (47%), Gaps = 29/127 (22%) Query: 77 ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136 E LL+ +A+ L R ++I D +G+G++ + + K + + G G +I+ A E+ Sbjct: 213 EVSLLMSEIVAYHL---RDRKEIKIYDPTSGSGSLLINIGKSAARYMGTGNNIAYYAQEL 269 Query: 137 AKS-------NAVTNGVSERF------DTLQSDW--FSS------VEGLF-----DVIVS 170 ++ N V G+ DTL+ DW FS +EG + D +VS Sbjct: 270 KQNTYNLTRMNLVMRGIKANMIETRCGDTLEDDWPYFSEDDKGVKIEGTYDPLYVDAVVS 329 Query: 171 NPPYIES 177 NPPY ++ Sbjct: 330 NPPYSQN 336 >gi|320010002|gb|ADW04852.1| methyltransferase small [Streptomyces flavogriseus ATCC 33331] Length = 528 Score = 42.7 bits (99), Expect = 0.053, Method: Compositional matrix adjust. Identities = 40/131 (30%), Positives = 56/131 (42%), Gaps = 15/131 (11%) Query: 95 KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154 ++ V LDLGTG+G AL S + D++ +ALE + +G + D + Sbjct: 184 RKPVTSALDLGTGSG--IQALHAASHAGRVTATDVNPRALEFTRLTLALSGAAP-ADLRE 240 Query: 155 SDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213 F V FD+IVSNPP+ VI L R DGG+ G RT+ Sbjct: 241 GSLFDPVGAETFDLIVSNPPF---VISPGARLTYR--------DGGMGGDDLCRTLVQQA 289 Query: 214 SRHLNKDGLCS 224 HL + G Sbjct: 290 GEHLAEGGYAQ 300 >gi|290892603|ref|ZP_06555596.1| conserved hypothetical protein [Listeria monocytogenes FSL J2-071] gi|290557912|gb|EFD91433.1| conserved hypothetical protein [Listeria monocytogenes FSL J2-071] Length = 201 Score = 42.7 bits (99), Expect = 0.053, Method: Compositional matrix adjust. Identities = 24/74 (32%), Positives = 39/74 (52%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 +ILD+G G G + L + K P + D++ +ALE+AK NA N ++ S + + Sbjct: 62 KILDVGCGYGPMGLTVAKAFPDSQIEMADVNLRALELAKENAEINKITNTHIYESSVYDN 121 Query: 160 SVEGLFDVIVSNPP 173 + I+SNPP Sbjct: 122 VTANDYQAIISNPP 135 >gi|312197025|ref|YP_004017086.1| O-methyltransferase family 2 [Frankia sp. EuI1c] gi|311228361|gb|ADP81216.1| O-methyltransferase family 2 [Frankia sp. EuI1c] Length = 371 Score = 42.7 bits (99), Expect = 0.053, Method: Compositional matrix adjust. Identities = 18/57 (31%), Positives = 33/57 (57%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 R+ DLG G+G + ++K +P GVG+D++ ++E+A G+++R Q D Sbjct: 174 RVADLGCGSGGRLVRIMKRNPGVTGVGIDLAPASVELAGQVIAAEGLADRLSVRQGD 230 >gi|294815596|ref|ZP_06774239.1| N-methyl-transferase [Streptomyces clavuligerus ATCC 27064] gi|326443946|ref|ZP_08218680.1| N-methyl-transferase [Streptomyces clavuligerus ATCC 27064] gi|294328195|gb|EFG09838.1| N-methyl-transferase [Streptomyces clavuligerus ATCC 27064] Length = 239 Score = 42.7 bits (99), Expect = 0.053, Method: Compositional matrix adjust. Identities = 45/144 (31%), Positives = 65/144 (45%), Gaps = 21/144 (14%) Query: 102 LDLGTGTG--AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 L++G GTG AV AL S +DI+ KA+ +NA +GVS+R L SD ++ Sbjct: 75 LEVGCGTGVIAVTAAL---SGCTSVTALDINEKAIANTVANAERHGVSDRVRALHSDMYT 131 Query: 160 SVEGL--FDVIVSNPP--YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215 ++ FD I N P Y+E L FDP G G + Y G Sbjct: 132 ALAPTDRFDTIFWNVPWTYVEDGYALSTDLHTAVFDP------GYRGQARYLA---GAHE 182 Query: 216 HLNKDG---LCSVEIGYNQKVDVV 236 HL G L + ++G +++D V Sbjct: 183 HLADGGRLLLGTADLGDRERLDAV 206 >gi|224584496|ref|YP_002638294.1| transferase [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|224469023|gb|ACN46853.1| putative transferase [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|326624412|gb|EGE30757.1| Methyltransferase domain containing protein [Salmonella enterica subsp. enterica serovar Dublin str. 3246] Length = 219 Score = 42.7 bits (99), Expect = 0.053, Method: Compositional matrix adjust. Identities = 29/85 (34%), Positives = 43/85 (50%), Gaps = 6/85 (7%) Query: 97 DVVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQS 155 DV RILD+GTG+G + L L + + + V++ A A+ N + R T+ + Sbjct: 18 DVKRILDIGTGSGLLALMLAQRTDDNVPIDAVELDAGAAMQAQENVAHSPWPHRI-TVHT 76 Query: 156 D----WFSSVEGLFDVIVSNPPYIE 176 D W FD+I+SNPPY E Sbjct: 77 DDIQRWAPRQTVRFDLIISNPPYYE 101 >gi|254450580|ref|ZP_05064017.1| methyltransferase small [Octadecabacter antarcticus 238] gi|198264986|gb|EDY89256.1| methyltransferase small [Octadecabacter antarcticus 238] Length = 253 Score = 42.7 bits (99), Expect = 0.053, Method: Compositional matrix adjust. Identities = 54/211 (25%), Positives = 83/211 (39%), Gaps = 21/211 (9%) Query: 60 FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119 F RLTL +P VD L + R + V LDLG GTGA L L Sbjct: 12 FLGGRLTLE----QPTKGYRAGVDPVLLAAAVRAQAGQSV--LDLGCGTGAALLCLATRV 65 Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ-SDWFSSVEGL-FDVIVSNPPYIES 177 GV++ + ++ + NA N + T D S + L FD ++ NPPY + Sbjct: 66 SGLALHGVEVQPRYADLCRVNATANNIDTTIWTADLRDLPSDLRALTFDHVMVNPPYFKR 125 Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237 + L RD G + D +R L G ++ ++ D++R Sbjct: 126 SSGNSSPLPDRDI--------AFAGDTATVNWIDTATRRLKPKGTLTMIQKADRLPDLLR 177 Query: 238 IFESRKLFLVNAF----KDYGGNDRVLLFCR 264 + R L +N + +D DR++L R Sbjct: 178 AIDER-LGAINVYPITGRDGRAADRIILRAR 207 >gi|291482478|dbj|BAI83553.1| hypothetical protein BSNT_00207 [Bacillus subtilis subsp. natto BEST195] Length = 201 Score = 42.7 bits (99), Expect = 0.054, Method: Compositional matrix adjust. Identities = 31/98 (31%), Positives = 52/98 (53%), Gaps = 10/98 (10%) Query: 78 TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137 + LL+DS F P +E LD+G G G + L+L + +D++ +A+E++ Sbjct: 46 SRLLIDS---FEEPEVEGS----FLDVGCGYGPIGLSLASDFKDRTIHMIDVNERAVELS 98 Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPP 173 NA NG++ QSD FS+++ F I++NPP Sbjct: 99 NENAEQNGIT-NVKIYQSDLFSNIDSAQTFASILTNPP 135 >gi|119358085|ref|YP_912729.1| Mg-protoporphyrin IX methyl transferase [Chlorobium phaeobacteroides DSM 266] gi|119355434|gb|ABL66305.1| magnesium protoporphyrin O-methyltransferase [Chlorobium phaeobacteroides DSM 266] Length = 231 Score = 42.7 bits (99), Expect = 0.054, Method: Compositional matrix adjust. Identities = 24/69 (34%), Positives = 42/69 (60%), Gaps = 3/69 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LD G GTG + + KE +K VDI+ + ++ AK++A+ GV++ D + + S Sbjct: 69 VLDAGCGTGLFSIRIAKEG--YKVKAVDIASQMVDKAKADAIKKGVAKNID-FEVNTIES 125 Query: 161 VEGLFDVIV 169 V+G +DV+V Sbjct: 126 VKGKYDVVV 134 >gi|294785502|ref|ZP_06750790.1| ribosomal RNA small subunit methyltransferase C [Fusobacterium sp. 3_1_27] gi|294487216|gb|EFG34578.1| ribosomal RNA small subunit methyltransferase C [Fusobacterium sp. 3_1_27] Length = 223 Score = 42.7 bits (99), Expect = 0.054, Method: Compositional matrix adjust. Identities = 27/98 (27%), Positives = 53/98 (54%), Gaps = 6/98 (6%) Query: 83 DSALAFSL--PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140 D+ L F L + K+++ ++LD+GTG G + + L + +G+DI + ++ A Sbjct: 29 DTILLFKLFQASLNKKNI-KLLDIGTGNGILPILLSNNEFLSELIGIDIQKENIDRANMA 87 Query: 141 AVTNGVSE--RFDTLQSDWFSSVEGLFDVIVSNPPYIE 176 N + + +F+ + + + FDVI+SNPPY++ Sbjct: 88 LELNKIEKNIQFECMDIREYKN-SNYFDVIISNPPYMD 124 >gi|56412535|ref|YP_149610.1| hypothetical protein SPA0276 [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197361470|ref|YP_002141106.1| hypothetical protein SSPA0261 [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|81821605|sp|Q5PNB8|TRMN6_SALPA RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName: Full=tRNA m6A37 methyltransferase gi|262828623|sp|B5BAS2|TRMN6_SALPK RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName: Full=tRNA m6A37 methyltransferase gi|262831261|sp|A9N0W9|TRMN6_SALPB RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName: Full=tRNA m6A37 methyltransferase gi|56126792|gb|AAV76298.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197092946|emb|CAR58376.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] Length = 245 Score = 42.7 bits (99), Expect = 0.054, Method: Compositional matrix adjust. Identities = 29/85 (34%), Positives = 43/85 (50%), Gaps = 6/85 (7%) Query: 97 DVVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQS 155 DV RILD+GTG+G + L L + + + V++ A A+ N + R T+ + Sbjct: 44 DVKRILDIGTGSGLLALMLAQRTDDNVPIDAVELDAGAAMQAQENVAHSPWPHRI-TVHT 102 Query: 156 D----WFSSVEGLFDVIVSNPPYIE 176 D W FD+I+SNPPY E Sbjct: 103 DDIQRWAPRQTVRFDLIISNPPYYE 127 >gi|284800547|ref|YP_003412412.1| hypothetical protein LM5578_0294 [Listeria monocytogenes 08-5578] gi|284993733|ref|YP_003415501.1| hypothetical protein LM5923_0293 [Listeria monocytogenes 08-5923] gi|284056109|gb|ADB67050.1| hypothetical protein LM5578_0294 [Listeria monocytogenes 08-5578] gi|284059200|gb|ADB70139.1| hypothetical protein LM5923_0293 [Listeria monocytogenes 08-5923] Length = 201 Score = 42.7 bits (99), Expect = 0.055, Method: Compositional matrix adjust. Identities = 25/74 (33%), Positives = 39/74 (52%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 +ILD+G G G + L + K P + VD++ +ALE+AK NA N + S + + Sbjct: 62 KILDVGCGYGPMGLTVAKAFPDSQIEMVDVNLRALELAKENAGINKTTNTHIYESSVYDN 121 Query: 160 SVEGLFDVIVSNPP 173 + I+SNPP Sbjct: 122 VTANDYQAIISNPP 135 >gi|254293447|ref|YP_003059470.1| methyltransferase small [Hirschia baltica ATCC 49814] gi|254041978|gb|ACT58773.1| methyltransferase small [Hirschia baltica ATCC 49814] Length = 244 Score = 42.7 bits (99), Expect = 0.055, Method: Compositional matrix adjust. Identities = 28/102 (27%), Positives = 46/102 (45%), Gaps = 6/102 (5%) Query: 86 LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145 LA SL K+ RIL+ G G GA L+ G++ + L +A+ N N Sbjct: 32 LAASLEAAPKQ---RILEAGCGAGAALLSCAHRLQGVHVAGLERDERMLALAQQNVAENA 88 Query: 146 VSERFDTLQSDWFSSVEGL---FDVIVSNPPYIESVIVDCLG 184 + +R + Q D + + L +D + SNPP+ + +G Sbjct: 89 LQDRVEVFQGDVSNRPDSLLNAYDQVFSNPPFFNPSTIQAVG 130 >gi|209964970|ref|YP_002297885.1| methyltransferase small domain protein [Rhodospirillum centenum SW] gi|209958436|gb|ACI99072.1| methyltransferase small domain protein [Rhodospirillum centenum SW] Length = 254 Score = 42.7 bits (99), Expect = 0.055, Method: Compositional matrix adjust. Identities = 24/88 (27%), Positives = 38/88 (43%), Gaps = 4/88 (4%) Query: 93 IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152 + R +L+LG G GA L L +P + ++ A + NG +R Sbjct: 45 VPARAGEAVLELGAGAGAATLCLAARAPGCRLTALERQPAAAAALRQGVALNGWQDRISV 104 Query: 153 LQSDWFSSVEGL----FDVIVSNPPYIE 176 L+ D + GL FD ++ NPP+ E Sbjct: 105 LEGDLRAPPPGLPLNGFDRVLMNPPFYE 132 >gi|53713594|ref|YP_099586.1| putative RNA methyltransferase [Bacteroides fragilis YCH46] gi|81825000|sp|Q64TX7|TRMN6_BACFR RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName: Full=tRNA m6A37 methyltransferase gi|52216459|dbj|BAD49052.1| putative RNA methyltransferase [Bacteroides fragilis YCH46] Length = 237 Score = 42.7 bits (99), Expect = 0.055, Method: Compositional matrix adjust. Identities = 45/151 (29%), Positives = 68/151 (45%), Gaps = 14/151 (9%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW- 157 RILD+GTGTG V L +L + + ++I KA + A N + R + + D+ Sbjct: 39 ARILDIGTGTGLVAL-MLAQRCSASVIALEIDGKAAQQAAENITRSPWGSRIEVVCQDFR 97 Query: 158 -FSSVEG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214 +S+ +D IVSNPPY D L D + + D LS Y + GVS Sbjct: 98 LYSNKNNSLKYDTIVSNPPY----FTDSLKCP----DSQRNTARHNDNLS-YEELLKGVS 148 Query: 215 RHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245 L+ +G +V I + I S+ L+ Sbjct: 149 NLLSPNGTFTVVIPMDASDSFKDIASSQGLY 179 >gi|332163157|ref|YP_004299734.1| ribosomal protein L11 methyltransferase [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|318603959|emb|CBY25457.1| ribosomal protein L11 methyltransferase [Yersinia enterocolitica subsp. palearctica Y11] gi|325667387|gb|ADZ44031.1| ribosomal protein L11 methyltransferase [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330862842|emb|CBX72983.1| ribosomal protein L11 methyltransferase [Yersinia enterocolitica W22703] Length = 293 Score = 42.7 bits (99), Expect = 0.055, Method: Compositional matrix adjust. Identities = 39/120 (32%), Positives = 62/120 (51%), Gaps = 18/120 (15%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159 ++D G G+G + +A LK + +G+DI +A++ ++ NA NGVSER + L D + Sbjct: 162 VIDFGCGSGILAIAALKLG-AARAIGIDIDPQAIQASRDNAQRNGVSERLELYLAKDQPA 220 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS---LDGGIDGLSH-YRTIADGVSR 215 + DV+V+N L +R+ P IS + GG GLS T A GV++ Sbjct: 221 DLSA--DVVVAN----------ILAGPLRELAPLISVLPVAGGHLGLSGVLATQAAGVAQ 268 >gi|307251172|ref|ZP_07533094.1| tRNA (adenine-N(6)-)-methyltransferase [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306856838|gb|EFM88972.1| tRNA (adenine-N(6)-)-methyltransferase [Actinobacillus pleuropneumoniae serovar 4 str. M62] Length = 236 Score = 42.7 bits (99), Expect = 0.055, Method: Compositional matrix adjust. Identities = 28/81 (34%), Positives = 39/81 (48%), Gaps = 2/81 (2%) Query: 96 RDVVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQ 154 R +ILDLGTGTG V + L + + + +++ A A N + S+R Q Sbjct: 37 RHKRQILDLGTGTGLVVIMLAQRTDENTQISALELEPNAYRQAVENCRNSAFSDRLQVYQ 96 Query: 155 SDWFS-SVEGLFDVIVSNPPY 174 D FD+IVSNPPY Sbjct: 97 GDVLDYHFHQKFDLIVSNPPY 117 >gi|226307504|ref|YP_002767464.1| hypothetical protein RER_40170 [Rhodococcus erythropolis PR4] gi|226186621|dbj|BAH34725.1| conserved hypothetical protein [Rhodococcus erythropolis PR4] Length = 372 Score = 42.7 bits (99), Expect = 0.055, Method: Compositional matrix adjust. Identities = 58/206 (28%), Positives = 91/206 (44%), Gaps = 33/206 (16%) Query: 26 PDSVLDDRQRFFLTN-AIVRSLK--------HESIHRILGWRDFYNVRLTLSSDTFEP-R 75 PD+ + + F +T VRSL+ HE HR + + + R+ + F P R Sbjct: 121 PDAQVALTEAFGITGEPSVRSLRDILGAIGAHE-WHRKGVFIEALDARVHPAFGVFSPVR 179 Query: 76 PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135 E LV SA LP E D+GTGTG V A+L D +AL+ Sbjct: 180 GEYVDLVTSA---PLPSTES-----AFDIGTGTG-VLAAVLARRGVKTVTATDQDPRALQ 230 Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195 A++N G ++ + +++D F EG ++V NPP+I + + V +DP + Sbjct: 231 CARTNLSRLGYGDQVNVVEADLFP--EGTAPLVVCNPPWIPAKATSPIEYAV--YDPAGA 286 Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDG 221 + L + T GV+ HL+ G Sbjct: 287 M------LKGFLT---GVAAHLDDGG 303 >gi|163803827|ref|ZP_02197677.1| ribosomal protein L11 methyltransferase [Vibrio sp. AND4] gi|159172370|gb|EDP57247.1| ribosomal protein L11 methyltransferase [Vibrio sp. AND4] Length = 295 Score = 42.7 bits (99), Expect = 0.055, Method: Compositional matrix adjust. Identities = 33/112 (29%), Positives = 59/112 (52%), Gaps = 17/112 (15%) Query: 74 PRPET-ELLVDSALAFS----------LPRIEKRDVV--RILDLGTGTGAVCLALLKESP 120 P P+ +++D LAF L +E +D+ ++D G G+G + +A +K Sbjct: 123 PEPDAVNVMLDPGLAFGTGTHPTTALCLEWLESKDLSGKTVIDFGCGSGILAIAAIKLG- 181 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF-DVIVSN 171 K +G+DI +AL+ ++ NA NGV+++ + + EGL DV+V+N Sbjct: 182 AEKVIGIDIDPQALQASRDNAERNGVADQLEVYLPQ--NQPEGLLADVVVAN 231 >gi|190151256|ref|YP_001969781.1| hypothetical protein APP7_1987 [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|307264607|ref|ZP_07546189.1| tRNA (adenine-N(6)-)-methyltransferase [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|262827836|sp|B3H2W9|TRMN6_ACTP7 RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName: Full=tRNA m6A37 methyltransferase gi|189916387|gb|ACE62639.1| hypothetical protein APP7_1987 [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|306870070|gb|EFN01832.1| tRNA (adenine-N(6)-)-methyltransferase [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 236 Score = 42.7 bits (99), Expect = 0.056, Method: Compositional matrix adjust. Identities = 28/81 (34%), Positives = 39/81 (48%), Gaps = 2/81 (2%) Query: 96 RDVVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQ 154 R +ILDLGTGTG V + L + + + +++ A A N + S+R Q Sbjct: 37 RHKRQILDLGTGTGLVAIMLAQRTDENTRISALELEPNAYRQAVENCRNSAFSDRLQVYQ 96 Query: 155 SDWFS-SVEGLFDVIVSNPPY 174 D FD+IVSNPPY Sbjct: 97 GDVLDYHFHQKFDLIVSNPPY 117 >gi|313639730|gb|EFS04489.1| methyltransferase [Listeria seeligeri FSL S4-171] Length = 201 Score = 42.7 bits (99), Expect = 0.056, Method: Compositional matrix adjust. Identities = 32/116 (27%), Positives = 59/116 (50%), Gaps = 10/116 (8%) Query: 61 YNVRLTLSSDTFEPRP---ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117 +N++ T + F +++L+++ FSL + + ILD+G G G + L + K Sbjct: 27 FNMQFTSDNGVFSKNTVDFGSQVLIET---FSLQEVSGK----ILDVGCGYGPMGLTVAK 79 Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173 E P + VD++ +ALE+A NA N ++ S + + + + I+SNPP Sbjct: 80 EFPESQVDMVDVNLRALELAGENAKLNQITNVRIYESSVYENVADEDYQAIISNPP 135 >gi|298524048|ref|ZP_07011457.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] gi|298493842|gb|EFI29136.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] Length = 238 Score = 42.7 bits (99), Expect = 0.056, Method: Compositional matrix adjust. Identities = 29/98 (29%), Positives = 49/98 (50%), Gaps = 13/98 (13%) Query: 73 EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCK 132 EP+PE L+ ++ + +LD+G G A+ LAL + VG+D+S Sbjct: 45 EPQPELAALI----------VQGKFRGDVLDVGCGEAAISLALAERG--HTTVGLDLSPA 92 Query: 133 ALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEGLFDVIV 169 A+E+A+ A G++ F+ + F+ +G FD IV Sbjct: 93 AVELARHEAAKRGLANASFEVADASSFTGYDGRFDTIV 130 >gi|296188045|ref|ZP_06856437.1| type I restriction-modification system, M subunit [Clostridium carboxidivorans P7] gi|296047171|gb|EFG86613.1| type I restriction-modification system, M subunit [Clostridium carboxidivorans P7] Length = 529 Score = 42.7 bits (99), Expect = 0.056, Method: Compositional matrix adjust. Identities = 43/152 (28%), Positives = 66/152 (43%), Gaps = 24/152 (15%) Query: 93 IEKRD-VVRILDLGTGTGAVCLALLKESPF---FKGVGVDISCKALEIAKSNAVTNGVS- 147 +EK D + D G+G++ L + +E P K G +++ +A+ N + + VS Sbjct: 221 VEKSDEFFNLYDPTMGSGSLLLTVGQELPKGTPMKYFGQELNTTTYNLARMNLMMHDVSY 280 Query: 148 -----ERFDTLQSDWFSSVEGL-------FDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195 DTL+SDW +G FD +V+NPPY D L+ DPR S Sbjct: 281 NNMVLNNADTLESDWPDGPDGKGIDHPRSFDAVVANPPYSAKWDNDETKLK----DPRFS 336 Query: 196 LDGGIDGLSH--YRTIADGVSRHLNKDGLCSV 225 G + S Y I + HLN G ++ Sbjct: 337 DYGKLAPASKADYAFILHSI-YHLNNTGTMAI 367 >gi|170781618|ref|YP_001709950.1| hypothetical protein CMS_1213 [Clavibacter michiganensis subsp. sepedonicus] gi|169156186|emb|CAQ01328.1| conserved hypothetical protein [Clavibacter michiganensis subsp. sepedonicus] Length = 205 Score = 42.7 bits (99), Expect = 0.056, Method: Compositional matrix adjust. Identities = 42/145 (28%), Positives = 66/145 (45%), Gaps = 9/145 (6%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LD+G G G V L L +P VD++ +ALE+ ++NA + G+ L D Sbjct: 63 LLDVGCGWGPVALDLAIRAPSATVWAVDVNERALELTRANARSLGLDNVNAVLPGD---V 119 Query: 161 VEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN- 218 EGL F + SNPP V + L + D+ PR++ D + +D + R L Sbjct: 120 PEGLSFATVWSNPPI--RVGKEVLHQILLDWMPRLAPDADAWLVVQRNLGSDSLQRWLVD 177 Query: 219 --KDGLCSVEIGYNQKVDVVRIFES 241 GL + N+ V+R+ S Sbjct: 178 ALPAGLETTRAASNKGFRVLRVHRS 202 >gi|289705358|ref|ZP_06501754.1| putative ubiquinone/menaquinone biosynthesis methyltransferase [Micrococcus luteus SK58] gi|289557873|gb|EFD51168.1| putative ubiquinone/menaquinone biosynthesis methyltransferase [Micrococcus luteus SK58] Length = 247 Score = 42.7 bits (99), Expect = 0.057, Method: Compositional matrix adjust. Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 8/59 (13%) Query: 91 PRIEKRDVVR--------ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 PR+ +R V R +LDL TGTG + +LK+ P + VG DI+ + +E+ ++ A Sbjct: 48 PRLVRRTVARANIPAQARVLDLATGTGDLAFEVLKQHPDAQVVGADIAAEMMEVGRARA 106 >gi|186477486|ref|YP_001858956.1| methyltransferase small [Burkholderia phymatum STM815] gi|184193945|gb|ACC71910.1| methyltransferase small [Burkholderia phymatum STM815] Length = 389 Score = 42.7 bits (99), Expect = 0.057, Method: Compositional matrix adjust. Identities = 31/104 (29%), Positives = 53/104 (50%), Gaps = 4/104 (3%) Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162 D+G GTG V A+L + + V D +AL A+ N G ++ + + +D F E Sbjct: 216 DIGVGTG-VLSAVLAKRGVARIVATDQDPRALACARENLTRLGYDKQVELIAADLFP--E 272 Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206 G +IV NPP++ + + V D++ R+ L G + GL+ + Sbjct: 273 GRAPLIVCNPPWLPARPASPIENAVYDYESRMLL-GFLSGLADH 315 >gi|291542118|emb|CBL15228.1| type I restriction system adenine methylase (hsdM) [Ruminococcus bromii L2-63] Length = 511 Score = 42.7 bits (99), Expect = 0.057, Method: Compositional matrix adjust. Identities = 42/153 (27%), Positives = 70/153 (45%), Gaps = 26/153 (16%) Query: 94 EKRDVVRILDLGTGTGAVCLALLKESP------FFKGVGVDISCKALEIAKSNAVTNGVS 147 E V + D G+G++ L + E P K G +++ +A+ N + +GVS Sbjct: 201 ESDSVFSVYDPTCGSGSLLLTVQDEVPGGNNTGAVKFYGQELNTTTYNLARMNLMMHGVS 260 Query: 148 ------ERFDTLQSDWFSS--VEGL-----FDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194 DTL+SDW V+G+ FD +V+NPPY S D +++ DPR Sbjct: 261 FQNMSLSNADTLESDWPDGPDVKGIDHPRSFDAVVANPPY--SAHWDNSETKLK--DPRF 316 Query: 195 SLDGGI--DGLSHYRTIADGVSRHLNKDGLCSV 225 G + + Y + G+ HLN++G ++ Sbjct: 317 KDYGKLAPKTKADYSFVLHGL-YHLNEEGTMAI 348 >gi|126664960|ref|ZP_01735943.1| 16S RNA G1207 methylase RsmC [Marinobacter sp. ELB17] gi|126630330|gb|EBA00945.1| 16S RNA G1207 methylase RsmC [Marinobacter sp. ELB17] Length = 364 Score = 42.7 bits (99), Expect = 0.057, Method: Compositional matrix adjust. Identities = 38/132 (28%), Positives = 57/132 (43%), Gaps = 7/132 (5%) Query: 70 DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV-GVD 128 +T P T L V +A +P +R+LD G G + L E V VD Sbjct: 197 ETLASTPLTTLSVRAAP--GIPPTRAGKALRVLDFACGAGVIGAWLQTEENTDLSVDAVD 254 Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLE-- 186 + +AL A+ A + V R + + SD + ++G + +VSNPP+ V D E Sbjct: 255 VQSQALLSAR--ATYDRVGARGEIIASDGIAGLDGRWQAVVSNPPFHSGVRTDMTMTERF 312 Query: 187 VRDFDPRISLDG 198 VRD + G Sbjct: 313 VRDLASHLEHGG 324 >gi|256784605|ref|ZP_05523036.1| hypothetical protein SlivT_08953 [Streptomyces lividans TK24] gi|289768490|ref|ZP_06527868.1| conserved hypothetical protein [Streptomyces lividans TK24] gi|289698689|gb|EFD66118.1| conserved hypothetical protein [Streptomyces lividans TK24] Length = 499 Score = 42.7 bits (99), Expect = 0.058, Method: Compositional matrix adjust. Identities = 30/77 (38%), Positives = 40/77 (51%), Gaps = 2/77 (2%) Query: 73 EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCK 132 EP+P T L V A L + R+LDLG G G + LL+E F + VGVD+S + Sbjct: 276 EPKP-TPLAVHRREAI-LTALRDHAAARVLDLGCGEGHLVRELLREPRFTEIVGVDVSVR 333 Query: 133 ALEIAKSNAVTNGVSER 149 AL IA + + ER Sbjct: 334 ALTIASRRLKLDRMGER 350 >gi|126434000|ref|YP_001069691.1| methyltransferase small [Mycobacterium sp. JLS] gi|126233800|gb|ABN97200.1| methyltransferase small [Mycobacterium sp. JLS] Length = 507 Score = 42.7 bits (99), Expect = 0.058, Method: Compositional matrix adjust. Identities = 46/131 (35%), Positives = 62/131 (47%), Gaps = 15/131 (11%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R LDLGTG G L L S V D + +AL +A + A NG+S +D F Sbjct: 168 RALDLGTGCGIQALHLDAHSSEI--VATDTNERALALAAATARLNGMS--WDLRCGSLFE 223 Query: 160 SVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 V G FD+IVSNPP++ +G RD+ I D G+ G + R + + VS HL Sbjct: 224 PVAGERFDLIVSNPPFV-------VGAGARDY---IYRDSGMVGDALCRNLIERVSDHLE 273 Query: 219 KDGLCSVEIGY 229 G V + Sbjct: 274 PGGTAHVMANW 284 >gi|16765962|ref|NP_461577.1| transferase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|238912707|ref|ZP_04656544.1| putative transferase [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|81853695|sp|Q8ZMX8|TRMN6_SALTY RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName: Full=tRNA m6A37 methyltransferase gi|262831275|sp|C0PVY6|TRMN6_SALPC RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName: Full=tRNA m6A37 methyltransferase gi|16421192|gb|AAL21536.1| putative transferase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|261247840|emb|CBG25669.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267994782|gb|ACY89667.1| putative transferase [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301159193|emb|CBW18708.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312913636|dbj|BAJ37610.1| putative transferase [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|322613359|gb|EFY10301.1| tRNA (adenine-N(6)-)-methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322620437|gb|EFY17302.1| tRNA (adenine-N(6)-)-methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322625095|gb|EFY21924.1| tRNA (adenine-N(6)-)-methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322629461|gb|EFY26237.1| tRNA (adenine-N(6)-)-methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322633848|gb|EFY30587.1| tRNA (adenine-N(6)-)-methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322635454|gb|EFY32165.1| tRNA (adenine-N(6)-)-methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322639870|gb|EFY36549.1| tRNA (adenine-N(6)-)-methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322644244|gb|EFY40788.1| tRNA (adenine-N(6)-)-methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322649936|gb|EFY46356.1| tRNA (adenine-N(6)-)-methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322654881|gb|EFY51198.1| tRNA (adenine-N(6)-)-methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322658191|gb|EFY54457.1| tRNA (adenine-N(6)-)-methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322661737|gb|EFY57955.1| tRNA (adenine-N(6)-)-methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322669718|gb|EFY65864.1| tRNA (adenine-N(6)-)-methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322673275|gb|EFY69380.1| tRNA (adenine-N(6)-)-methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322674936|gb|EFY71023.1| tRNA (adenine-N(6)-)-methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322682959|gb|EFY78977.1| tRNA (adenine-N(6)-)-methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322685620|gb|EFY81615.1| tRNA (adenine-N(6)-)-methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323130980|gb|ADX18410.1| putative transferase [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|323191952|gb|EFZ77190.1| tRNA (adenine-N(6)-)-methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323200415|gb|EFZ85496.1| tRNA (adenine-N(6)-)-methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323201314|gb|EFZ86381.1| tRNA (adenine-N(6)-)-methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323208385|gb|EFZ93325.1| tRNA (adenine-N(6)-)-methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323211539|gb|EFZ96377.1| tRNA (adenine-N(6)-)-methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323215971|gb|EGA00703.1| tRNA (adenine-N(6)-)-methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323221752|gb|EGA06160.1| tRNA (adenine-N(6)-)-methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323225640|gb|EGA09867.1| tRNA (adenine-N(6)-)-methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323229358|gb|EGA13482.1| tRNA (adenine-N(6)-)-methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323235327|gb|EGA19411.1| tRNA (adenine-N(6)-)-methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323237487|gb|EGA21550.1| tRNA (adenine-N(6)-)-methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323245242|gb|EGA29243.1| tRNA (adenine-N(6)-)-methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323246467|gb|EGA30448.1| tRNA (adenine-N(6)-)-methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323254002|gb|EGA37824.1| tRNA (adenine-N(6)-)-methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323259052|gb|EGA42700.1| tRNA (adenine-N(6)-)-methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323261975|gb|EGA45540.1| tRNA (adenine-N(6)-)-methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323267758|gb|EGA51239.1| tRNA (adenine-N(6)-)-methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323269683|gb|EGA53135.1| tRNA (adenine-N(6)-)-methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] gi|332989571|gb|AEF08554.1| putative transferase [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 245 Score = 42.7 bits (99), Expect = 0.058, Method: Compositional matrix adjust. Identities = 29/85 (34%), Positives = 43/85 (50%), Gaps = 6/85 (7%) Query: 97 DVVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQS 155 DV RILD+GTG+G + L L + + + V++ A A+ N + R T+ + Sbjct: 44 DVKRILDIGTGSGLLALMLAQRTDDNVPIDAVELDAGAAMQAQENVAHSPWPHRI-TVHT 102 Query: 156 D----WFSSVEGLFDVIVSNPPYIE 176 D W FD+I+SNPPY E Sbjct: 103 DDIQRWAPRQTVRFDLIISNPPYYE 127 >gi|70727465|ref|YP_254381.1| hypothetical protein SH2466 [Staphylococcus haemolyticus JCSC1435] gi|68448191|dbj|BAE05775.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435] Length = 202 Score = 42.7 bits (99), Expect = 0.058, Method: Compositional matrix adjust. Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 2/74 (2%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 I D+G G G + L + K SP + VD++ +AL +A+ N N + + +SD S Sbjct: 64 IADVGCGYGPIGLMIAKVSPHHQITMVDVNKRALNLAEKNKKANQI-DNVIIKESDGLSQ 122 Query: 161 V-EGLFDVIVSNPP 173 + + FD +++NPP Sbjct: 123 LKDSHFDYVLTNPP 136 >gi|487713|emb|CAA55769.1| lmbW [Streptomyces lincolnensis] Length = 318 Score = 42.7 bits (99), Expect = 0.058, Method: Compositional matrix adjust. Identities = 21/70 (30%), Positives = 37/70 (52%) Query: 93 IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152 + R R+LD+G G G + + P G+G+DI A+E+A+ A GV++R + Sbjct: 135 MRGRGARRVLDVGCGGGQLLVDACLRDPSLTGIGLDIDPAAVEVAQDLAERQGVADRVEF 194 Query: 153 LQSDWFSSVE 162 + D F+ + Sbjct: 195 VVGDAFAPAD 204 >gi|50122208|ref|YP_051375.1| hypothetical protein ECA3286 [Pectobacterium atrosepticum SCRI1043] gi|81827048|sp|Q6D211|TRMN6_ERWCT RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName: Full=tRNA m6A37 methyltransferase gi|49612734|emb|CAG76184.1| conserved hypothetical protein [Pectobacterium atrosepticum SCRI1043] Length = 248 Score = 42.7 bits (99), Expect = 0.058, Method: Compositional matrix adjust. Identities = 25/81 (30%), Positives = 44/81 (54%), Gaps = 4/81 (4%) Query: 98 VVRILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 R+LD+G+G+G + L L + S P + V++ A + AK N+ + ++R D Sbjct: 48 ATRVLDIGSGSGLLALMLAQRSEPHVRIDAVELDSAASQQAKENSAASPWADRITVYAED 107 Query: 157 W--FSSVEGL-FDVIVSNPPY 174 FS++ + +I+SNPPY Sbjct: 108 IVSFSAMRTADYSLIISNPPY 128 >gi|302873026|ref|YP_003841659.1| methyltransferase small [Clostridium cellulovorans 743B] gi|307688819|ref|ZP_07631265.1| methyltransferase small [Clostridium cellulovorans 743B] gi|302575883|gb|ADL49895.1| methyltransferase small [Clostridium cellulovorans 743B] Length = 244 Score = 42.4 bits (98), Expect = 0.059, Method: Compositional matrix adjust. Identities = 29/97 (29%), Positives = 47/97 (48%), Gaps = 6/97 (6%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 VD+ L + +++ R++DL TGTG + L ++ VG++I + +E+A Sbjct: 31 VDAVLLANFANVKRSH--RVIDLCTGTGIIPFILAGKTESNSIVGIEIQDEFVEMADRTV 88 Query: 142 VTNGVSERFD----TLQSDWFSSVEGLFDVIVSNPPY 174 N + ER L+ F GL DV+ NPPY Sbjct: 89 EYNKLQERVSFHCRDLKDLAFLKTLGLVDVVTVNPPY 125 >gi|163859173|ref|YP_001633471.1| ribosomal protein L11 methyltransferase [Bordetella petrii DSM 12804] gi|163262901|emb|CAP45204.1| Ribosomal protein L11 methyltransferase [Bordetella petrii] Length = 276 Score = 42.4 bits (98), Expect = 0.059, Method: Compositional matrix adjust. Identities = 37/142 (26%), Positives = 68/142 (47%), Gaps = 18/142 (12%) Query: 72 FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131 F P PE + +A+ P+ ++DLG+G G + +A +++ + GVDI Sbjct: 40 FVPTPEDAVAKMLDMAYVGPQDT------VIDLGSGDGRIAIAAVRDRKAARATGVDIDP 93 Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFD 191 + + A++NA GV +R +Q + LF+ +S + ++ + L++R Sbjct: 94 ERIAEARANAKHAGVQDRVRFVQ-------QNLFETDISKATVLTMYLLPDVNLKLR--- 143 Query: 192 PRI--SLDGGIDGLSHYRTIAD 211 PRI +L G +SH T+ D Sbjct: 144 PRILSNLAPGTRVVSHAFTMGD 165 >gi|134098368|ref|YP_001104029.1| rRNA/tRNA methylase [Saccharopolyspora erythraea NRRL 2338] gi|291006930|ref|ZP_06564903.1| rRNA/tRNA methylase [Saccharopolyspora erythraea NRRL 2338] gi|133910991|emb|CAM01104.1| probable rRNA/tRNA methylase [Saccharopolyspora erythraea NRRL 2338] Length = 505 Score = 42.4 bits (98), Expect = 0.059, Method: Compositional matrix adjust. Identities = 29/82 (35%), Positives = 42/82 (51%), Gaps = 5/82 (6%) Query: 95 KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154 +R V +LDLGTG G AL + + D+S +AL +A + N V + + Sbjct: 154 RRPVGSVLDLGTGCG--VQALHASTHAERVTATDVSKRALALADATFRLNRVD--VELAE 209 Query: 155 SDWFSSVEG-LFDVIVSNPPYI 175 +WF V G FD IV NPP++ Sbjct: 210 GEWFEPVRGRRFDQIVCNPPFV 231 >gi|320094007|ref|ZP_08025832.1| 16S rRNA methyltransferase [Actinomyces sp. oral taxon 178 str. F0338] gi|319979051|gb|EFW10569.1| 16S rRNA methyltransferase [Actinomyces sp. oral taxon 178 str. F0338] Length = 203 Score = 42.4 bits (98), Expect = 0.059, Method: Compositional matrix adjust. Identities = 26/76 (34%), Positives = 42/76 (55%), Gaps = 3/76 (3%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE--RFDTLQSDWF 158 +LDLG G G + + + ESP VD++ +AL++ + NA NG + + ++ Sbjct: 63 LLDLGCGWGPLAVVMGLESPGATVWAVDVNTRALDLTERNAEANGAANVSAMNAGEALER 122 Query: 159 SSVEGL-FDVIVSNPP 173 + EG+ FD I SNPP Sbjct: 123 ARSEGVRFDAIWSNPP 138 >gi|295397937|ref|ZP_06807994.1| methyltransferase domain protein [Aerococcus viridans ATCC 11563] gi|294973822|gb|EFG49592.1| methyltransferase domain protein [Aerococcus viridans ATCC 11563] Length = 217 Score = 42.4 bits (98), Expect = 0.059, Method: Compositional matrix adjust. Identities = 26/73 (35%), Positives = 39/73 (53%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LDLG G G V + + P GVDIS +A+ +AK NA N V + + + + Sbjct: 77 LLDLGAGYGPVGVIMGTMLPDRAIYGVDISERAIGLAKDNAAANHVDNVTFQVSNAYEAI 136 Query: 161 VEGLFDVIVSNPP 173 + F VI++NPP Sbjct: 137 AKRDFGVILTNPP 149 >gi|283786192|ref|YP_003366057.1| DNA-binding protein [Citrobacter rodentium ICC168] gi|282949646|emb|CBG89265.1| putative DNA-binding protein [Citrobacter rodentium ICC168] Length = 245 Score = 42.4 bits (98), Expect = 0.059, Method: Compositional matrix adjust. Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 8/83 (9%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGV---GVDISCKALEIAKSNAVTNGVSERFDTLQ 154 V RILD+GTG+G + L L + + K V V++ +A A+ N + ++R Sbjct: 45 VKRILDIGTGSGLLALMLAQRTD--KSVIIDAVELDDEAAAQAQENVAGSPWADRVSVYT 102 Query: 155 ---SDWFSSVEGLFDVIVSNPPY 174 W + G FD+I+SNPPY Sbjct: 103 GAIQHWAARQTGKFDLIISNPPY 125 >gi|238764616|ref|ZP_04625562.1| Ribosomal protein L11 methyltransferase [Yersinia kristensenii ATCC 33638] gi|238697206|gb|EEP89977.1| Ribosomal protein L11 methyltransferase [Yersinia kristensenii ATCC 33638] Length = 299 Score = 42.4 bits (98), Expect = 0.059, Method: Compositional matrix adjust. Identities = 39/120 (32%), Positives = 62/120 (51%), Gaps = 18/120 (15%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159 ++D G G+G + +A LK + +G+DI +A++ ++ NA NGVSER + L D + Sbjct: 167 VIDFGCGSGILAIAALKLG-AKRAIGIDIDPQAIQASRDNAQRNGVSERLELYLAKDQPA 225 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS---LDGGIDGLSH-YRTIADGVSR 215 + DV+V+N L +R+ P IS + GG GLS T A GV++ Sbjct: 226 DLSA--DVVVAN----------ILAGPLRELAPLISVLPVTGGHLGLSGVLATQAAGVAQ 273 >gi|68249024|ref|YP_248136.1| O-methyltransferase [Haemophilus influenzae 86-028NP] gi|68057223|gb|AAX87476.1| predicted O-methyltransferase [Haemophilus influenzae 86-028NP] Length = 240 Score = 42.4 bits (98), Expect = 0.059, Method: Compositional matrix adjust. Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 4/84 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD--- 156 ILD+G+GTG + L L + + + V++ A + A+ N + R Q+D Sbjct: 47 ILDMGSGTGLLTLMLAQRTEENCQIQAVELDPIAAKQAQENINNSVWKNRIQLTQADIQH 106 Query: 157 WFSSVEGLFDVIVSNPPYIESVIV 180 + + E FD+IV+NPPY E I Sbjct: 107 FLQTTEQTFDLIVANPPYFEQGIA 130 >gi|170717884|ref|YP_001784939.1| type I restriction-modification system, M subunit [Haemophilus somnus 2336] gi|168826013|gb|ACA31384.1| type I restriction-modification system, M subunit [Haemophilus somnus 2336] Length = 537 Score = 42.4 bits (98), Expect = 0.059, Method: Compositional matrix adjust. Identities = 26/98 (26%), Positives = 48/98 (48%), Gaps = 17/98 (17%) Query: 94 EKRDVVRILDLGTGTGAVCLALLKESPFFKGV---GVDISCKALEIAKSNAVTNGVSER- 149 + ++ + D G+G++ L + E P K + G +++ +A+ N + +GVS + Sbjct: 222 DNQETFLVYDPTMGSGSLLLTVGNELPQSKPIKYYGQELNTTTYNLARMNLMMHGVSYKN 281 Query: 150 -----FDTLQSDWFSSVEGL--------FDVIVSNPPY 174 DTL+SDW ++ FD +V+NPPY Sbjct: 282 MTLSNADTLESDWPEGLDAQGIDQPLCRFDAVVANPPY 319 >gi|315633345|ref|ZP_07888636.1| metallothionein SmtA [Aggregatibacter segnis ATCC 33393] gi|315477845|gb|EFU68586.1| metallothionein SmtA [Aggregatibacter segnis ATCC 33393] Length = 235 Score = 42.4 bits (98), Expect = 0.060, Method: Compositional matrix adjust. Identities = 28/87 (32%), Positives = 45/87 (51%), Gaps = 5/87 (5%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD-- 156 +ILDLG+G+G + L L + S + V+I A + A N + + + Q D Sbjct: 40 QILDLGSGSGLIALMLAQRSSAESRICAVEIDHAAAQQACENVLISPWKNKIQVYQQDID 99 Query: 157 -WFSSVEGLFDVIVSNPPYIESVIVDC 182 + + FD+IV+NPPY ++ VDC Sbjct: 100 SFCTQTAERFDLIVANPPYFQTG-VDC 125 >gi|312889325|ref|ZP_07748879.1| methyltransferase small [Mucilaginibacter paludis DSM 18603] gi|311298202|gb|EFQ75317.1| methyltransferase small [Mucilaginibacter paludis DSM 18603] Length = 235 Score = 42.4 bits (98), Expect = 0.060, Method: Compositional matrix adjust. Identities = 36/128 (28%), Positives = 60/128 (46%), Gaps = 15/128 (11%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ---SDW 157 ILD+GTGTG + L + ++ P V++ A + A N + S + ++ Sbjct: 38 ILDIGTGTGVIALMMAQKFPGAVIDAVELDTAAAQTAGKNFGNSNFSNKLHVHPLGFEEY 97 Query: 158 FS-SVEGLFDVIVSNPP-YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215 F+ E +D+IV+NPP YI S ++ G +++L D + + + VS Sbjct: 98 FNHHPEKKYDLIVANPPFYINS--LEAAG-------DKMNLAKHTDQ-TFFEVLIKAVSA 147 Query: 216 HLNKDGLC 223 HL GLC Sbjct: 148 HLASKGLC 155 >gi|237732561|ref|ZP_04563042.1| conserved hypothetical protein [Citrobacter sp. 30_2] gi|226908100|gb|EEH94018.1| conserved hypothetical protein [Citrobacter sp. 30_2] Length = 268 Score = 42.4 bits (98), Expect = 0.060, Method: Compositional matrix adjust. Identities = 31/91 (34%), Positives = 44/91 (48%), Gaps = 9/91 (9%) Query: 98 VVRILDLGTGTGAVCLALLK---ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154 V RILD+GTG+G + L L + E+ V +D+ A + A+ N + R Sbjct: 68 VKRILDIGTGSGLLALMLAQRTDENVIIDAVELDVD--AAQQAQENIAQSPWMHRVSVHT 125 Query: 155 SD---WFSSVEGLFDVIVSNPPYIESVIVDC 182 D W FD+I+SNPPY E V+C Sbjct: 126 EDAQQWIPRQTVRFDLIISNPPYYEQG-VEC 155 >gi|15607700|ref|NP_215074.1| benzoquinone methyltransferase [Mycobacterium tuberculosis H37Rv] gi|15839958|ref|NP_334995.1| hypothetical protein MT0586 [Mycobacterium tuberculosis CDC1551] gi|31791742|ref|NP_854235.1| benzoquinone methyltransferase [Mycobacterium bovis AF2122/97] gi|121636478|ref|YP_976701.1| putative benzoquinone methyltransferase [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148660329|ref|YP_001281852.1| putative benzoquinone methyltransferase [Mycobacterium tuberculosis H37Ra] gi|148821761|ref|YP_001286515.1| benzoquinone methyltransferase [Mycobacterium tuberculosis F11] gi|167968367|ref|ZP_02550644.1| hypothetical benzoquinone methyltransferase [Mycobacterium tuberculosis H37Ra] gi|215402326|ref|ZP_03414507.1| benzoquinone methyltransferase [Mycobacterium tuberculosis 02_1987] gi|215410097|ref|ZP_03418905.1| benzoquinone methyltransferase [Mycobacterium tuberculosis 94_M4241A] gi|215425795|ref|ZP_03423714.1| benzoquinone methyltransferase [Mycobacterium tuberculosis T92] gi|215429392|ref|ZP_03427311.1| benzoquinone methyltransferase [Mycobacterium tuberculosis EAS054] gi|215444670|ref|ZP_03431422.1| benzoquinone methyltransferase [Mycobacterium tuberculosis T85] gi|218752198|ref|ZP_03530994.1| benzoquinone methyltransferase [Mycobacterium tuberculosis GM 1503] gi|219556396|ref|ZP_03535472.1| benzoquinone methyltransferase [Mycobacterium tuberculosis T17] gi|224988950|ref|YP_002643637.1| putative benzoquinone methyltransferase [Mycobacterium bovis BCG str. Tokyo 172] gi|253797492|ref|YP_003030493.1| benzoquinone methyltransferase [Mycobacterium tuberculosis KZN 1435] gi|254230903|ref|ZP_04924230.1| hypothetical protein TBCG_00555 [Mycobacterium tuberculosis C] gi|254363519|ref|ZP_04979565.1| hypothetical benzoquinone methyltransferase [Mycobacterium tuberculosis str. Haarlem] gi|254549515|ref|ZP_05139962.1| benzoquinone methyltransferase [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|260185434|ref|ZP_05762908.1| benzoquinone methyltransferase [Mycobacterium tuberculosis CPHL_A] gi|260199563|ref|ZP_05767054.1| benzoquinone methyltransferase [Mycobacterium tuberculosis T46] gi|260203717|ref|ZP_05771208.1| benzoquinone methyltransferase [Mycobacterium tuberculosis K85] gi|289441945|ref|ZP_06431689.1| benzoquinone methyltransferase [Mycobacterium tuberculosis T46] gi|289446107|ref|ZP_06435851.1| benzoquinone methyltransferase [Mycobacterium tuberculosis CPHL_A] gi|289552812|ref|ZP_06442022.1| benzoquinone methyltransferase [Mycobacterium tuberculosis KZN 605] gi|289568488|ref|ZP_06448715.1| benzoquinone methyltransferase [Mycobacterium tuberculosis T17] gi|289573152|ref|ZP_06453379.1| benzoquinone methyltransferase [Mycobacterium tuberculosis K85] gi|289744273|ref|ZP_06503651.1| benzoquinone methyltransferase [Mycobacterium tuberculosis 02_1987] gi|289749059|ref|ZP_06508437.1| benzoquinone methyltransferase [Mycobacterium tuberculosis T92] gi|289752599|ref|ZP_06511977.1| benzoquinone methyltransferase [Mycobacterium tuberculosis EAS054] gi|289756637|ref|ZP_06516015.1| conserved hypothetical protein [Mycobacterium tuberculosis T85] gi|289760679|ref|ZP_06520057.1| benzoquinone methyltransferase [Mycobacterium tuberculosis GM 1503] gi|294996070|ref|ZP_06801761.1| benzoquinone methyltransferase [Mycobacterium tuberculosis 210] gi|297633050|ref|ZP_06950830.1| benzoquinone methyltransferase [Mycobacterium tuberculosis KZN 4207] gi|297730027|ref|ZP_06959145.1| benzoquinone methyltransferase [Mycobacterium tuberculosis KZN R506] gi|313657355|ref|ZP_07814235.1| benzoquinone methyltransferase [Mycobacterium tuberculosis KZN V2475] gi|2114022|emb|CAB08971.1| POSSIBLE BENZOQUINONE METHYLTRANSFERASE (METHYLASE) [Mycobacterium tuberculosis H37Rv] gi|13880098|gb|AAK44809.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551] gi|31617328|emb|CAD93437.1| POSSIBLE BENZOQUINONE METHYLTRANSFERASE (METHYLASE) [Mycobacterium bovis AF2122/97] gi|121492125|emb|CAL70590.1| POssible benzoquinone methyltransferase [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|124599962|gb|EAY58972.1| hypothetical protein TBCG_00555 [Mycobacterium tuberculosis C] gi|134149033|gb|EBA41078.1| hypothetical benzoquinone methyltransferase [Mycobacterium tuberculosis str. Haarlem] gi|148504481|gb|ABQ72290.1| putative benzoquinone methyltransferase [Mycobacterium tuberculosis H37Ra] gi|148720288|gb|ABR04913.1| hypothetical benzoquinone methyltransferase [Mycobacterium tuberculosis F11] gi|224772063|dbj|BAH24869.1| putative benzoquinone methyltransferase [Mycobacterium bovis BCG str. Tokyo 172] gi|253318995|gb|ACT23598.1| benzoquinone methyltransferase [Mycobacterium tuberculosis KZN 1435] gi|289414864|gb|EFD12104.1| benzoquinone methyltransferase [Mycobacterium tuberculosis T46] gi|289419065|gb|EFD16266.1| benzoquinone methyltransferase [Mycobacterium tuberculosis CPHL_A] gi|289437444|gb|EFD19937.1| benzoquinone methyltransferase [Mycobacterium tuberculosis KZN 605] gi|289537583|gb|EFD42161.1| benzoquinone methyltransferase [Mycobacterium tuberculosis K85] gi|289542242|gb|EFD45890.1| benzoquinone methyltransferase [Mycobacterium tuberculosis T17] gi|289684801|gb|EFD52289.1| benzoquinone methyltransferase [Mycobacterium tuberculosis 02_1987] gi|289689646|gb|EFD57075.1| benzoquinone methyltransferase [Mycobacterium tuberculosis T92] gi|289693186|gb|EFD60615.1| benzoquinone methyltransferase [Mycobacterium tuberculosis EAS054] gi|289708185|gb|EFD72201.1| benzoquinone methyltransferase [Mycobacterium tuberculosis GM 1503] gi|289712201|gb|EFD76213.1| conserved hypothetical protein [Mycobacterium tuberculosis T85] gi|326902389|gb|EGE49322.1| benzoquinone methyltransferase [Mycobacterium tuberculosis W-148] gi|328457277|gb|AEB02700.1| benzoquinone methyltransferase [Mycobacterium tuberculosis KZN 4207] Length = 241 Score = 42.4 bits (98), Expect = 0.060, Method: Compositional matrix adjust. Identities = 29/98 (29%), Positives = 49/98 (50%), Gaps = 13/98 (13%) Query: 73 EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCK 132 EP+PE L+ ++ + +LD+G G A+ LAL + VG+D+S Sbjct: 48 EPQPELAALI----------VQGKFRGDVLDVGCGEAAISLALAERG--HTTVGLDLSPA 95 Query: 133 ALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEGLFDVIV 169 A+E+A+ A G++ F+ + F+ +G FD IV Sbjct: 96 AVELARHEAAKRGLANASFEVADASSFTGYDGRFDTIV 133 >gi|315038269|ref|YP_004031837.1| type I restriction-modification system, M subunit [Lactobacillus amylovorus GRL 1112] gi|312276402|gb|ADQ59042.1| type I restriction-modification system, M subunit [Lactobacillus amylovorus GRL 1112] Length = 557 Score = 42.4 bits (98), Expect = 0.060, Method: Compositional matrix adjust. Identities = 32/131 (24%), Positives = 58/131 (44%), Gaps = 18/131 (13%) Query: 58 RDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117 R+F + + + + P+ +ELL +L + + + + D G+G++ L K Sbjct: 201 REFASESGKKAGEFYTPQKVSELLT----KLTLVGKKYPEGMTVYDPAMGSGSLLLNFKK 256 Query: 118 ESPFFKG--------VGVDISCKALEIAKSNAVTNGVSE------RFDTLQSDWFSSVEG 163 F G G +I+ +A+ N + +GV + DTL +DW + Sbjct: 257 YIKDFAGGDPNKVIYYGQEINISTFNLARMNMILHGVDSGNQHLRQGDTLDADWPPISQT 316 Query: 164 LFDVIVSNPPY 174 +FD +V NPPY Sbjct: 317 MFDAVVMNPPY 327 >gi|189204900|ref|XP_001938785.1| hypothetical protein PTRG_08453 [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187985884|gb|EDU51372.1| hypothetical protein PTRG_08453 [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 301 Score = 42.4 bits (98), Expect = 0.060, Method: Compositional matrix adjust. Identities = 29/91 (31%), Positives = 42/91 (46%), Gaps = 14/91 (15%) Query: 96 RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN--------AVTNGVS 147 +D RILDLG GTG C+ + E P + +GVD+S + N + S Sbjct: 154 KDPKRILDLGCGTGIWCMDMADEYPGAEILGVDLSPIQPQFTPPNCKFEIDDVTLPWTYS 213 Query: 148 ERFDTLQSDWFSSVEGLFDVIVSNPPYIESV 178 +RFD F ++ GL+ I S P E + Sbjct: 214 QRFD------FINIRGLYGSIRSWPALYEQI 238 >gi|19704117|ref|NP_603679.1| methyltransferase [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|296328675|ref|ZP_06871192.1| methyltransferase [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|19714323|gb|AAL94978.1| Methyltransferase [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|296154274|gb|EFG95075.1| methyltransferase [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 243 Score = 42.4 bits (98), Expect = 0.060, Method: Compositional matrix adjust. Identities = 35/117 (29%), Positives = 61/117 (52%), Gaps = 12/117 (10%) Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 N+++ SD F +DS L I K+++ +ILDLGTG A+ L L K++ Sbjct: 15 NLKIIQRSDYFN------FSIDSLLISEFVNI-KKNIKKILDLGTGNAAIPLFLSKKTS- 66 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSER----FDTLQSDWFSSVEGLFDVIVSNPPY 174 K G++I + +A N N ++E+ +D +++ G FD+++SNPP+ Sbjct: 67 AKIYGIEIQEISYNLALRNININNLNEQIYIIYDNMKNYLKYFDIGSFDIVISNPPF 123 >gi|237744555|ref|ZP_04575036.1| ribosomal RNA small subunit methyltransferase C [Fusobacterium sp. 7_1] gi|229431784|gb|EEO41996.1| ribosomal RNA small subunit methyltransferase C [Fusobacterium sp. 7_1] Length = 202 Score = 42.4 bits (98), Expect = 0.061, Method: Compositional matrix adjust. Identities = 29/98 (29%), Positives = 54/98 (55%), Gaps = 8/98 (8%) Query: 83 DSALAFSL--PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG-VGVDISCKALEIAKS 139 D+ L F L + K+++ ++LD+GTG G + + LL ++ F VG+DI + ++ A Sbjct: 29 DTILLFKLFQASLNKKNI-KLLDIGTGNGILPI-LLSDNEFLSELVGIDIQKENIDRANK 86 Query: 140 NAVTNGVSE--RFDTLQSDWFSSVEGLFDVIVSNPPYI 175 N + + +F+ + + FD+I+SNPPY+ Sbjct: 87 ALQLNKIEKNIQFECMDIREYKK-SNYFDIIISNPPYM 123 >gi|256821947|ref|YP_003145910.1| methyltransferase small [Kangiella koreensis DSM 16069] gi|256795486|gb|ACV26142.1| methyltransferase small [Kangiella koreensis DSM 16069] Length = 197 Score = 42.4 bits (98), Expect = 0.061, Method: Compositional matrix adjust. Identities = 30/102 (29%), Positives = 47/102 (46%), Gaps = 5/102 (4%) Query: 72 FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131 F PR +D L ++ LDLG G GA+ + + K++P + + VD Sbjct: 36 FSPRN-----IDDGTIMLLKYMDIETTDNCLDLGCGYGALGITMAKQAPQGQTLMVDKDF 90 Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173 A++ A N NGV+ L + + + E F+VI SN P Sbjct: 91 VAVDYANKNCELNGVTNATARLSNGFSAVTEKNFNVICSNIP 132 >gi|323968023|gb|EGB63435.1| gyfiC [Escherichia coli M863] gi|327252285|gb|EGE63957.1| methyltransferase small domain protein [Escherichia coli STEC_7v] Length = 245 Score = 42.4 bits (98), Expect = 0.062, Method: Compositional matrix adjust. Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 5/89 (5%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 V R LD+G G+G + L L + + + V++ +A A+ N + +ER + +D Sbjct: 45 VKRCLDIGAGSGLLALMLAQRTDDSVMIDAVELEGEAATQAQENINQSPWAERINIYPAD 104 Query: 157 ---WFSSVEGLFDVIVSNPPYIESVIVDC 182 W + FD+I+SNPPY + V+C Sbjct: 105 IQQWITQQTARFDLIISNPPYYQQG-VEC 132 >gi|319898056|ref|YP_004136253.1| o-methyltransferase [Haemophilus influenzae F3031] gi|317433562|emb|CBY81946.1| predicted O-methyltransferase [Haemophilus influenzae F3031] Length = 232 Score = 42.4 bits (98), Expect = 0.062, Method: Compositional matrix adjust. Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 4/84 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD--- 156 ILD+G+GTG + L L + + + V++ A + A+ N + R Q+D Sbjct: 39 ILDMGSGTGLLALMLAQRTEENCQIQAVELDPIAAKQAQENINNSVWKNRIQLTQADIQH 98 Query: 157 WFSSVEGLFDVIVSNPPYIESVIV 180 + + E FD+IV+NPPY E I Sbjct: 99 FLQTTEQTFDLIVANPPYFEQGIA 122 >gi|269115260|ref|YP_003303023.1| DNA methylase [Mycoplasma hominis] gi|268322885|emb|CAX37620.1| DNA methylase [Mycoplasma hominis ATCC 23114] Length = 184 Score = 42.4 bits (98), Expect = 0.062, Method: Compositional matrix adjust. Identities = 29/90 (32%), Positives = 50/90 (55%), Gaps = 8/90 (8%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER----FDTLQS 155 ++LDL +G+GA CL L F V VD + +A++I K N N + E F+ Sbjct: 45 KVLDLFSGSGAFCLEALSRGAKF-AVCVDKNAEAIKIIKEN--QNSLKEPNLKIFNIDAL 101 Query: 156 DWFSSVEGLFDVIVSNPPYIE-SVIVDCLG 184 ++ ++ +FD I +PP++E ++V+CL Sbjct: 102 NFLNNNVEVFDYIYLDPPFVEKKLLVECLN 131 >gi|238896026|ref|YP_002920762.1| putative enzyme [Klebsiella pneumoniae NTUH-K2044] gi|238548344|dbj|BAH64695.1| putative enzyme [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length = 252 Score = 42.4 bits (98), Expect = 0.062, Method: Compositional matrix adjust. Identities = 25/88 (28%), Positives = 46/88 (52%), Gaps = 16/88 (18%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI-------AKSNAVTNGVSERF 150 V +LD+G G+G + L L + + G D+ +A+E+ A+ NA+ + + R Sbjct: 52 VKHVLDIGAGSGLLALMLAQRT------GDDVHVEAVELDEEAAAQARENALASPWASRI 105 Query: 151 DTLQSD---WFSSVEGLFDVIVSNPPYI 175 + Q+D W S +++I+SNPP+ Sbjct: 106 EVWQADIHQWQPSQTRRYELIISNPPFF 133 >gi|146284322|ref|YP_001174475.1| hypothetical protein PST_4010 [Pseudomonas stutzeri A1501] gi|145572527|gb|ABP81633.1| conserved hypothetical protein [Pseudomonas stutzeri A1501] Length = 398 Score = 42.4 bits (98), Expect = 0.062, Method: Compositional matrix adjust. Identities = 42/142 (29%), Positives = 67/142 (47%), Gaps = 35/142 (24%) Query: 100 RILDLGT--GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 R+LDL + G V A S F VD S AL+ + NA NGV+E+ ++ D Sbjct: 223 RVLDLFSYIGGWGVQAAAFGASEVF---CVDASAFALDGVERNAALNGVAEKMTCVEGDA 279 Query: 158 FSSVEGL------FDVIVSNPP-YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210 F +++ L FDV++++PP +I+ R D + +G + YR + Sbjct: 280 FEAMKELKNAEERFDVVITDPPAFIK-----------RKKDLK-------NGEAAYRRLN 321 Query: 211 DGVSRHLNKDGL-----CSVEI 227 + R LNKDG+ CS+ + Sbjct: 322 ETAMRLLNKDGILVSASCSMHL 343 >gi|145630402|ref|ZP_01786183.1| phosphatidylserine synthase [Haemophilus influenzae R3021] gi|144984137|gb|EDJ91574.1| phosphatidylserine synthase [Haemophilus influenzae R3021] Length = 232 Score = 42.4 bits (98), Expect = 0.062, Method: Compositional matrix adjust. Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 4/84 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD--- 156 ILD+G+GTG + L L + + + V++ A + A+ N + R Q+D Sbjct: 39 ILDMGSGTGLLALMLAQRTEENCQIQAVELDPIAAKQAQENINNSVWKNRIQLTQADIQH 98 Query: 157 WFSSVEGLFDVIVSNPPYIESVIV 180 + + E FD+IV+NPPY E I Sbjct: 99 FLQTTEQTFDLIVANPPYFEQGIA 122 >gi|239832294|ref|ZP_04680623.1| ribosomal protein L11 methyltransferase [Ochrobactrum intermedium LMG 3301] gi|239824561|gb|EEQ96129.1| ribosomal protein L11 methyltransferase [Ochrobactrum intermedium LMG 3301] Length = 285 Score = 42.4 bits (98), Expect = 0.063, Method: Compositional matrix adjust. Identities = 29/82 (35%), Positives = 42/82 (51%), Gaps = 8/82 (9%) Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 LDLGTG+ + +A+ K +P + DI A+ +A NA NGV+E T ++ F Sbjct: 151 LDLGTGSAVLAIAIAKLAP-IPVLATDIDPVAVTVAAENAAKNGVAEHIVTATAEGFGHA 209 Query: 162 ----EGLFDVIVSN---PPYIE 176 FD+IV+N P IE Sbjct: 210 IFRSYSPFDLIVANILANPLIE 231 >gi|159796251|gb|ABX00619.1| LmbW [Streptomyces lincolnensis] Length = 350 Score = 42.4 bits (98), Expect = 0.063, Method: Compositional matrix adjust. Identities = 21/70 (30%), Positives = 37/70 (52%) Query: 93 IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152 + R R+LD+G G G + + P G+G+DI A+E+A+ A GV++R + Sbjct: 167 MRGRGARRVLDVGCGGGQLLVDACLRDPSLTGIGLDIDPAAVEVAQDLAERQGVADRVEF 226 Query: 153 LQSDWFSSVE 162 + D F+ + Sbjct: 227 VVGDAFAPAD 236 >gi|149912231|ref|ZP_01900809.1| hypothetical protein PE36_22685 [Moritella sp. PE36] gi|149804690|gb|EDM64742.1| hypothetical protein PE36_22685 [Moritella sp. PE36] Length = 247 Score = 42.4 bits (98), Expect = 0.063, Method: Compositional matrix adjust. Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 14/100 (14%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF-FKGVGVDISCKALEIAKSN 140 D AF+ P +++LD+GTG+G + L L + + + +DI A + AK N Sbjct: 35 ADVTTAFTAP-------LKVLDIGTGSGLISLMLAQRCQGDMQAIAIDIDVSACQQAKKN 87 Query: 141 ----AVTNGVSERFDTLQ--SDWFSSVEGLFDVIVSNPPY 174 + ++ + LQ + + FD++VSNPPY Sbjct: 88 IDNSPWPSSIAVKHVALQAFTQAYKDEPAKFDLVVSNPPY 127 >gi|152994142|ref|YP_001338977.1| rRNA (guanine-N(2)-)-methyltransferase [Marinomonas sp. MWYL1] gi|226712959|sp|A6VRG3|RSMC_MARMS RecName: Full=Ribosomal RNA small subunit methyltransferase C; AltName: Full=16S rRNA m2G1207 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rsmC gi|150835066|gb|ABR69042.1| rRNA (guanine-N(2)-)-methyltransferase [Marinomonas sp. MWYL1] Length = 353 Score = 42.4 bits (98), Expect = 0.063, Method: Compositional matrix adjust. Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 1/83 (1%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 RILD G G G + L L ++ + +D S AL+ + N VS+ + S+ Sbjct: 210 ARILDFGCGDGIIALWLHNKTGA-RITALDDSVMALKATELTFAANQVSDAVTLIASNGL 268 Query: 159 SSVEGLFDVIVSNPPYIESVIVD 181 V+G F+ +V+NPP+ V D Sbjct: 269 DEVKGRFNYVVTNPPFHSGVNTD 291 >gi|326802942|ref|YP_004320760.1| methyltransferase small domain protein [Aerococcus urinae ACS-120-V-Col10a] gi|326650229|gb|AEA00412.1| methyltransferase small domain protein [Aerococcus urinae ACS-120-V-Col10a] Length = 200 Score = 42.4 bits (98), Expect = 0.063, Method: Compositional matrix adjust. Identities = 30/84 (35%), Positives = 43/84 (51%), Gaps = 8/84 (9%) Query: 94 EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153 E + +ILDLG G G V + L P VD++ +AL +AK N N V D+ Sbjct: 56 EGKTYHKILDLGCGYGPVGVVLGDHYPEVHLDLVDVNERALALAKKNLALNQV----DSA 111 Query: 154 QSDWFSSVEGL----FDVIVSNPP 173 S+ EGL +D+I++NPP Sbjct: 112 NFYLSSAYEGLSDHDYDLIITNPP 135 >gi|227499478|ref|ZP_03929589.1| TrmA family RNA methyltransferase [Anaerococcus tetradius ATCC 35098] gi|227218540|gb|EEI83783.1| TrmA family RNA methyltransferase [Anaerococcus tetradius ATCC 35098] Length = 461 Score = 42.4 bits (98), Expect = 0.063, Method: Compositional matrix adjust. Identities = 31/92 (33%), Positives = 51/92 (55%), Gaps = 12/92 (13%) Query: 87 AFSLPRIEKRDVVRILDL--GTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN 144 AF L RI+++ + +LDL GTGT +AL + G++I +A+E AK NA+ N Sbjct: 310 AFDLARIDEK--MNVLDLYSGTGTITQLMALKAKH----ATGIEIVEEAVEKAKENALLN 363 Query: 145 GVSERFDTLQSDWFSSVEGL---FDVIVSNPP 173 + + D L D +E + +DV++ +PP Sbjct: 364 KI-DNIDFLCGDVLEEIEKVSNRYDVVILDPP 394 >gi|70606437|ref|YP_255307.1| hypothetical protein Saci_0622 [Sulfolobus acidocaldarius DSM 639] gi|68567085|gb|AAY80014.1| conserved Archaeal protein [Sulfolobus acidocaldarius DSM 639] Length = 200 Score = 42.4 bits (98), Expect = 0.063, Method: Compositional matrix adjust. Identities = 32/117 (27%), Positives = 58/117 (49%), Gaps = 12/117 (10%) Query: 60 FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119 F+ +L L+ D + P +TEL+++ I+ +D +LD+G+GTG + L LK Sbjct: 9 FHGYKLCLNDDVYIPAEDTELIME--------MIKIKDGETVLDMGSGTGILSLHALKLG 60 Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSER-FDTLQSDWFSSVEGLFDVIVSNPPYI 175 + + +D++ A + +NG S + D + + FDV + NPPY+ Sbjct: 61 A-KRVLSIDVNPNAADATLCTLKSNGFSGNVLNCYLLDCIRNTK--FDVAIFNPPYL 114 >gi|293400626|ref|ZP_06644771.1| methyltransferase [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291305652|gb|EFE46896.1| methyltransferase [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 220 Score = 42.4 bits (98), Expect = 0.064, Method: Compositional matrix adjust. Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 5/95 (5%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 D++L + +I++ + RILD+GT GA+ + P + GV+I A ++A+ N Sbjct: 28 TDTSLLAAFMQIKQGE--RILDIGTNNGALLAVAATKQPAYL-YGVEIQEAACKLAEHNL 84 Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE 176 GV F L D + DV++ NPPY + Sbjct: 85 KDCGVP--FTILAGDASNMTLPKVDVVICNPPYFK 117 >gi|254822596|ref|ZP_05227597.1| hypothetical protein MintA_21884 [Mycobacterium intracellulare ATCC 13950] Length = 222 Score = 42.4 bits (98), Expect = 0.064, Method: Compositional matrix adjust. Identities = 48/195 (24%), Positives = 79/195 (40%), Gaps = 28/195 (14%) Query: 73 EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCK 132 EP+PE L+++ +LD G G AV L L + F VG+D S Sbjct: 25 EPQPEIAALIEAGKFHG----------DVLDAGCGEAAVSLYLAERG--FTTVGLDQSPT 72 Query: 133 ALEIAKSNAVTNGV-SERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFD 191 A+E+A+ A G+ S FD F+ +G F IV +S + + +E+RD Sbjct: 73 AIELAREKAARRGLTSASFDVADISAFTGYDGRFGTIV------DSTLFHSMPVELRDGY 126 Query: 192 PRISLDGGIDGLSHYRTI-------ADGVSRHLNKDGLCSVEIGYN--QKVDVVRIFESR 242 + + G S++ + ADG + +D L Y ++ RI + Sbjct: 127 QQSIVRAAAPGASYFVLVFDRAAMPADGPVNAVTEDELRDAVSKYWVIDEIRPARIHANV 186 Query: 243 KLFLVNAFKDYGGND 257 + F+ + G D Sbjct: 187 PESFLEGFQAFAGAD 201 >gi|288574648|ref|ZP_06393005.1| methyltransferase small [Dethiosulfovibrio peptidovorans DSM 11002] gi|288570389|gb|EFC91946.1| methyltransferase small [Dethiosulfovibrio peptidovorans DSM 11002] Length = 248 Score = 42.4 bits (98), Expect = 0.064, Method: Compositional matrix adjust. Identities = 33/107 (30%), Positives = 51/107 (47%), Gaps = 7/107 (6%) Query: 72 FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131 +P + VD+ L ++ + + RI +LG GAV L L K VG+DI Sbjct: 20 LQPLKGPRVNVDTVLLAGFSKVRRGE--RICELGCAHGAVSLILAKRKEV-SVVGLDIQE 76 Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPY 174 + +A+ N N +S+R + D + L FDV+V+NPPY Sbjct: 77 NLVHMAEKNRELNELSDRVSFIHGDLREIHKILPPQGFDVVVANPPY 123 >gi|195342065|ref|XP_002037622.1| GM18204 [Drosophila sechellia] gi|194132472|gb|EDW54040.1| GM18204 [Drosophila sechellia] Length = 224 Score = 42.4 bits (98), Expect = 0.064, Method: Compositional matrix adjust. Identities = 31/106 (29%), Positives = 56/106 (52%), Gaps = 5/106 (4%) Query: 72 FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE-SPFFKGVGVDIS 130 +EP ++ LL+D AL L +++ ++LG+G+G + AL K+ + F + DI+ Sbjct: 18 YEPAEDSFLLLD-ALEKDLEYLDRLQPRLCVELGSGSGVIITALAKKLAGFSMCLATDIN 76 Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYI 175 KA + A NG R D+++ ++ DV++ NPPY+ Sbjct: 77 PKACNATRRTATRNGA--RLDSIRCSLADALRPRSVDVLLFNPPYV 120 >gi|22299496|ref|NP_682743.1| hypothetical protein tlr1953 [Thermosynechococcus elongatus BP-1] gi|22295679|dbj|BAC09505.1| tlr1953 [Thermosynechococcus elongatus BP-1] Length = 218 Score = 42.4 bits (98), Expect = 0.064, Method: Compositional matrix adjust. Identities = 28/87 (32%), Positives = 49/87 (56%), Gaps = 8/87 (9%) Query: 86 LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT-N 144 LA LPR+++ +++LD+GTG G + L + P ++ G+D+S L IA+ ++ N Sbjct: 37 LAAVLPRVDQ--PLKVLDVGTGNGRILQLLHQRYPHWQLTGIDLSPAMLAIARHHSPQLN 94 Query: 145 GVSERFDTLQSDWFSSVEGLFDVIVSN 171 + TL F++ FDV++SN Sbjct: 95 FIEGDAKTLP---FAAAS--FDVVISN 116 >gi|288934044|ref|YP_003438103.1| methyltransferase small [Klebsiella variicola At-22] gi|288888773|gb|ADC57091.1| methyltransferase small [Klebsiella variicola At-22] Length = 245 Score = 42.4 bits (98), Expect = 0.064, Method: Compositional matrix adjust. Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 16/88 (18%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI-------AKSNAVTNGVSERF 150 V +LD+G G+G + L L + + G D+ A+E+ A+ NA+ + S R Sbjct: 45 VKHVLDIGAGSGLLALMLAQRT------GHDVQVDAVELDEEAAAQARENALASPWSSRI 98 Query: 151 DTLQSD---WFSSVEGLFDVIVSNPPYI 175 + Q+D W S +++I+SNPP+ Sbjct: 99 EVCQADIHQWQPSQTRRYELIISNPPFF 126 >gi|242241085|ref|YP_002989266.1| ribosomal protein L11 methyltransferase [Dickeya dadantii Ech703] gi|242133142|gb|ACS87444.1| ribosomal protein L11 methyltransferase [Dickeya dadantii Ech703] Length = 295 Score = 42.4 bits (98), Expect = 0.064, Method: Compositional matrix adjust. Identities = 38/120 (31%), Positives = 62/120 (51%), Gaps = 18/120 (15%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159 ++D G G+G + +A LK + +G+DI +A++ ++ NA NGVSER + L D + Sbjct: 162 VIDFGCGSGILAIAALKLG-AARAIGIDIDPQAIQASRDNAQRNGVSERLELYLPKDQPA 220 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL---DGGIDGLSH-YRTIADGVSR 215 + DV+V+N L +R+ P IS GG GLS + A+GV++ Sbjct: 221 DLSA--DVVVAN----------ILAGPLRELAPLISALPKAGGHLGLSGVLASQAEGVAK 268 >gi|237741850|ref|ZP_04572331.1| 16S rRNA m(2)G 1207 methyltransferase [Fusobacterium sp. 4_1_13] gi|229429498|gb|EEO39710.1| 16S rRNA m(2)G 1207 methyltransferase [Fusobacterium sp. 4_1_13] Length = 223 Score = 42.4 bits (98), Expect = 0.064, Method: Compositional matrix adjust. Identities = 28/98 (28%), Positives = 54/98 (55%), Gaps = 6/98 (6%) Query: 83 DSALAFSLPRIE-KRDVVRILDLGTGTGAVCLALLKESPFFKG-VGVDISCKALEIAKSN 140 D+ L F L ++ + +++LD+GTG G + + LL ++ F +G+DI + ++ A Sbjct: 29 DTILLFKLFQVSLNKKNIKLLDIGTGNGILPI-LLSDNEFLSELIGIDIQKENIDRANMA 87 Query: 141 AVTNGVSE--RFDTLQSDWFSSVEGLFDVIVSNPPYIE 176 N + + +F + + + FDVI+SNPPY++ Sbjct: 88 LELNKIEKNIQFKCMDIREYKN-SNYFDVIISNPPYMD 124 >gi|226228549|ref|YP_002762655.1| putative methyltransferase [Gemmatimonas aurantiaca T-27] gi|226091740|dbj|BAH40185.1| putative methyltransferase [Gemmatimonas aurantiaca T-27] Length = 556 Score = 42.4 bits (98), Expect = 0.064, Method: Compositional matrix adjust. Identities = 36/124 (29%), Positives = 52/124 (41%), Gaps = 14/124 (11%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R L+L +GTG L +DI+ ++ A NA N + LQ D ++ Sbjct: 206 RYLELCSGTGIAALDAAHRG-AEHAWAIDITARSTHFAAFNARMNALPN-VTALQGDLYA 263 Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 VEG FDVI ++PPY+ + I DGG DG R I + L Sbjct: 264 PVEGQQFDVISAHPPYVPATSTAL-----------IYRDGGEDGEQISRAIMARLPDFLA 312 Query: 219 KDGL 222 +G+ Sbjct: 313 PEGI 316 >gi|157691441|ref|YP_001485903.1| TrmA family RNA methyltransferase [Bacillus pumilus SAFR-032] gi|157680199|gb|ABV61343.1| TrmA family RNA methyltransferase [Bacillus pumilus SAFR-032] Length = 465 Score = 42.4 bits (98), Expect = 0.064, Method: Compositional matrix adjust. Identities = 41/160 (25%), Positives = 80/160 (50%), Gaps = 29/160 (18%) Query: 35 RFFLTNAIVRSLKHESIHRILG------WRDFY------NVRLTLSSDTF-EPRP-ETEL 80 RF +IV+++ + + I G W + Y +++ +S+ +F + P +T++ Sbjct: 240 RFPHIRSIVQNVNSKKTNVIFGDETTVLWGEEYIYDTIGDIKFAISARSFYQVNPAQTKM 299 Query: 81 LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140 L D AL ++ E + ++D G G + L L +++ + GV+I +A+E AK N Sbjct: 300 LYDKALEYA----ELQGEETVIDAYCGIGTISLFLAQKAG--RVYGVEIVPEAIEDAKRN 353 Query: 141 AVTNGVSE------RFDTLQSDWFSSVEGL-FDVIVSNPP 173 A NG++ +T+ +W+ EG+ D +V +PP Sbjct: 354 AALNGINNVEFAVGEAETVIPNWYK--EGIKADTLVVDPP 391 >gi|327482706|gb|AEA86016.1| conserved hypothetical protein [Pseudomonas stutzeri DSM 4166] Length = 398 Score = 42.4 bits (98), Expect = 0.065, Method: Compositional matrix adjust. Identities = 42/142 (29%), Positives = 67/142 (47%), Gaps = 35/142 (24%) Query: 100 RILDLGT--GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 R+LDL + G V A S F VD S AL+ + NA NGV+E+ ++ D Sbjct: 223 RVLDLFSYIGGWGVQAAAFGASEVF---CVDASAFALDGVERNAALNGVAEKMTCVEGDA 279 Query: 158 FSSVEGL------FDVIVSNPP-YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210 F +++ L FDV++++PP +I+ R D + +G + YR + Sbjct: 280 FEAMKELKNAEERFDVVITDPPAFIK-----------RKKDLK-------NGEAAYRRLN 321 Query: 211 DGVSRHLNKDGL-----CSVEI 227 + R LNKDG+ CS+ + Sbjct: 322 ETAMRLLNKDGILVSASCSMHL 343 >gi|296271470|ref|YP_003654102.1| methyltransferase small [Thermobispora bispora DSM 43833] gi|296094257|gb|ADG90209.1| methyltransferase small [Thermobispora bispora DSM 43833] Length = 490 Score = 42.4 bits (98), Expect = 0.065, Method: Compositional matrix adjust. Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 4/79 (5%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 V R LDLGTG+G L L + V D++ +AL +A+ +GV E D Q Sbjct: 150 VGRALDLGTGSGVQVLHLAGRASEI--VATDVNPRALCLARLTWALSGVGE-VDARQGSM 206 Query: 158 FSSV-EGLFDVIVSNPPYI 175 + V + FD+IV+NPP++ Sbjct: 207 YDPVADERFDLIVANPPFV 225 >gi|86147887|ref|ZP_01066192.1| ribosomal protein L11 methyltransferase [Vibrio sp. MED222] gi|85834314|gb|EAQ52467.1| ribosomal protein L11 methyltransferase [Vibrio sp. MED222] Length = 295 Score = 42.4 bits (98), Expect = 0.065, Method: Compositional matrix adjust. Identities = 35/112 (31%), Positives = 56/112 (50%), Gaps = 17/112 (15%) Query: 74 PRPET-ELLVDSALAFS----------LPRIEKRDVV--RILDLGTGTGAVCLALLKESP 120 P P+ +++D LAF L +E D+ ++D G G+G + +A +K Sbjct: 123 PEPDAVNVMLDPGLAFGTGTHPTTALCLEWLEGLDLTGKTVIDFGCGSGILAIAAIKLG- 181 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF-DVIVSN 171 K +G+DI +AL +K NA NGV+E+ + EGL DV+V+N Sbjct: 182 AAKVIGIDIDPQALLASKDNAQRNGVAEQLEVFLPQ--DQPEGLLADVVVAN 231 >gi|293394169|ref|ZP_06638469.1| ribosomal protein L11 methyltransferase [Serratia odorifera DSM 4582] gi|291423147|gb|EFE96376.1| ribosomal protein L11 methyltransferase [Serratia odorifera DSM 4582] Length = 293 Score = 42.4 bits (98), Expect = 0.065, Method: Compositional matrix adjust. Identities = 25/72 (34%), Positives = 44/72 (61%), Gaps = 4/72 (5%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159 ++D G G+G + +A LK + +G+DI +A++ ++ NA NGVSER + L D + Sbjct: 162 VIDFGCGSGILAIAALKLG-AARAIGIDIDPQAIQASRDNAQRNGVSERLELYLPKDQPA 220 Query: 160 SVEGLFDVIVSN 171 ++ DV+V+N Sbjct: 221 DLQA--DVVVAN 230 >gi|330834240|ref|YP_004408968.1| hypothetical protein Mcup_0376 [Metallosphaera cuprina Ar-4] gi|329566379|gb|AEB94484.1| conserved hypothetical protein [Metallosphaera cuprina Ar-4] Length = 165 Score = 42.4 bits (98), Expect = 0.066, Method: Compositional matrix adjust. Identities = 26/87 (29%), Positives = 47/87 (54%), Gaps = 6/87 (6%) Query: 72 FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131 + P PE ++ + ++ DVV DLG G G + +A +K K VGVD+S Sbjct: 13 YVPTPEKVVM----KMLEIAKVGSEDVV--YDLGCGDGRIIIAAVKNFGAKKAVGVDLSD 66 Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWF 158 + L+ A+ NA+ NGV ++ + ++++ Sbjct: 67 ERLKEAEQNAIQNGVRDKIELRKNNFL 93 >gi|308174333|ref|YP_003921038.1| 50S ribosomal protein L11 methyltransferase [Bacillus amyloliquefaciens DSM 7] gi|307607197|emb|CBI43568.1| ribosomal protein L11 methyltransferase [Bacillus amyloliquefaciens DSM 7] Length = 311 Score = 42.4 bits (98), Expect = 0.066, Method: Compositional matrix adjust. Identities = 38/141 (26%), Positives = 66/141 (46%), Gaps = 30/141 (21%) Query: 56 GWRDFYN-------VRLTLSSDTFEPRPETELLV--DSALAF-------------SLPRI 93 W+ +Y+ + + +T+ P EL++ D +AF +L RI Sbjct: 113 AWKKYYHPVKISEKFTIVPTWETYTPVHTDELIIEMDPGMAFGTGTHPTTVLCIQALERI 172 Query: 94 -EKRDVVRILDLGTGTG--AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150 +K D R++D+GTG+G ++ A+LK D+ A+E A+ N N VS+ Sbjct: 173 VQKGD--RVIDVGTGSGILSIAAAMLKAESVH---AYDLDPVAVESARLNVKLNKVSDTA 227 Query: 151 DTLQSDWFSSVEGLFDVIVSN 171 + Q++ + G DVIV+N Sbjct: 228 EVKQNNLLDGITGEHDVIVAN 248 >gi|84393067|ref|ZP_00991833.1| ribosomal protein L11 methyltransferase [Vibrio splendidus 12B01] gi|84376319|gb|EAP93201.1| ribosomal protein L11 methyltransferase [Vibrio splendidus 12B01] Length = 295 Score = 42.4 bits (98), Expect = 0.066, Method: Compositional matrix adjust. Identities = 35/112 (31%), Positives = 56/112 (50%), Gaps = 17/112 (15%) Query: 74 PRPET-ELLVDSALAFS----------LPRIEKRDVV--RILDLGTGTGAVCLALLKESP 120 P P+ +++D LAF L +E D+ ++D G G+G + +A +K Sbjct: 123 PEPDAVNVMLDPGLAFGTGTHPTTALCLEWLEGLDLTGKTVIDFGCGSGILAIAAIKLG- 181 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF-DVIVSN 171 K +G+DI +AL +K NA NGV+E+ + EGL DV+V+N Sbjct: 182 AAKVIGIDIDPQALLASKDNAQRNGVAEQLEVFLPQ--DQPEGLLADVVVAN 231 >gi|189485521|ref|YP_001956462.1| putative RNA methyltransferase [uncultured Termite group 1 bacterium phylotype Rs-D17] gi|170287480|dbj|BAG14001.1| putative RNA methyltransferase [uncultured Termite group 1 bacterium phylotype Rs-D17] Length = 449 Score = 42.4 bits (98), Expect = 0.066, Method: Compositional matrix adjust. Identities = 24/75 (32%), Positives = 42/75 (56%), Gaps = 4/75 (5%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV--SERFDTLQSDWF 158 +LDL GTGA+ +++ + +GV+ +A++ AK NA+ N V +E + + DW Sbjct: 309 LLDLYCGTGAIGISMAHNVK--RVIGVECIGQAIDNAKENALANNVFNAEFYASDAEDWI 366 Query: 159 SSVEGLFDVIVSNPP 173 + FD +V +PP Sbjct: 367 KENKSCFDAVVVDPP 381 >gi|156548692|ref|XP_001602591.1| PREDICTED: similar to prip interacting protein. pimt [Nasonia vitripennis] Length = 577 Score = 42.4 bits (98), Expect = 0.066, Method: Compositional matrix adjust. Identities = 40/155 (25%), Positives = 71/155 (45%), Gaps = 15/155 (9%) Query: 105 GTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL 164 G G ++ A E + +DI K +E+A+ NA GV +R + + D+F E L Sbjct: 429 GAGGNSISFAFTCERVY----AIDIDPKKIEMARHNARIYGVEDRIEFIIGDFFCLAERL 484 Query: 165 F-DVIVSNPPYIESVIVDCLGLEVRD-FDPRISLDGGIDGLSHYRTIADGVSRHLNKD-- 220 F DV+ +PP+ + ++ + DP GGI + I+D ++ L K+ Sbjct: 485 FGDVVFLSPPWGGPSYIQDKSFDIENIMDPH----GGIKLFEVSKRISDNIAYFLPKNIN 540 Query: 221 -GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYG 254 ++ G K+++ + F +L V A+ YG Sbjct: 541 TLQLAMTAGPGSKIELEQNFLDSQLIAVTAY--YG 573 >gi|145632668|ref|ZP_01788402.1| predicted O-methyltransferase [Haemophilus influenzae 3655] gi|229846509|ref|ZP_04466617.1| predicted O-methyltransferase [Haemophilus influenzae 7P49H1] gi|262831319|sp|Q4QNC1|TRMN6_HAEI8 RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName: Full=tRNA m6A37 methyltransferase gi|144986863|gb|EDJ93415.1| predicted O-methyltransferase [Haemophilus influenzae 3655] gi|229810602|gb|EEP46320.1| predicted O-methyltransferase [Haemophilus influenzae 7P49H1] Length = 232 Score = 42.4 bits (98), Expect = 0.066, Method: Compositional matrix adjust. Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 4/84 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD--- 156 ILD+G+GTG + L L + + + V++ A + A+ N + R Q+D Sbjct: 39 ILDMGSGTGLLTLMLAQRTEENCQIQAVELDPIAAKQAQENINNSVWKNRIQLTQADIQH 98 Query: 157 WFSSVEGLFDVIVSNPPYIESVIV 180 + + E FD+IV+NPPY E I Sbjct: 99 FLQTTEQTFDLIVANPPYFEQGIA 122 >gi|16077741|ref|NP_388555.1| RNA methyltransferase [Bacillus subtilis subsp. subtilis str. 168] gi|221308510|ref|ZP_03590357.1| hypothetical protein Bsubs1_03798 [Bacillus subtilis subsp. subtilis str. 168] gi|221312833|ref|ZP_03594638.1| hypothetical protein BsubsN3_03754 [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221317757|ref|ZP_03599051.1| hypothetical protein BsubsJ_03708 [Bacillus subtilis subsp. subtilis str. JH642] gi|221322036|ref|ZP_03603330.1| hypothetical protein BsubsS_03794 [Bacillus subtilis subsp. subtilis str. SMY] gi|50401309|sp|O31503|YEFA_BACSU RecName: Full=Uncharacterized RNA methyltransferase yefA gi|2632987|emb|CAB12493.1| putative RNA methyltransferase [Bacillus subtilis subsp. subtilis str. 168] Length = 459 Score = 42.4 bits (98), Expect = 0.066, Method: Compositional matrix adjust. Identities = 48/185 (25%), Positives = 85/185 (45%), Gaps = 34/185 (18%) Query: 10 FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILG------WRDFY-- 61 F+ R + I++ D +F +IV+++ + I G W + Y Sbjct: 219 FITRTSDFPHKAKIIE-----DITAQFPHVKSIVQNINPNKTNVIFGNETNVIWGEEYIY 273 Query: 62 ----NVRLTLSSDTF-EPRPE-TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL 115 +V+ +S+ +F + PE T++L D AL ++ E + ++D G G + L L Sbjct: 274 DLIGDVKFAISARSFYQVNPEQTKVLYDKALEYA----ELQGEETVIDAYCGIGTISLFL 329 Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVSE------RFDTLQSDWFSSVEGL-FDVI 168 K++ K GV+I +A+E AK NA NG + +T+ W+ EG+ D + Sbjct: 330 AKQAK--KVYGVEIVPEAIEDAKRNAELNGNTNAEFAVGEAETVIPKWYE--EGITADTL 385 Query: 169 VSNPP 173 V +PP Sbjct: 386 VVDPP 390 >gi|258511961|ref|YP_003185395.1| 50S ribosomal protein L11 methyltransferase [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257478687|gb|ACV59006.1| ribosomal protein L11 methyltransferase [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 316 Score = 42.4 bits (98), Expect = 0.067, Method: Compositional matrix adjust. Identities = 27/80 (33%), Positives = 45/80 (56%), Gaps = 7/80 (8%) Query: 96 RDVVRILDLGTGTG--AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153 R +R++D+GTGTG A+ AL+ + V +D+ A+ A N TNG+ +R D Sbjct: 176 RPGMRVVDVGTGTGVLAIAAALVGAE---RVVAIDLDPVAVSAATDNVRTNGLEDRVDVR 232 Query: 154 QSDWFSSV--EGLFDVIVSN 171 Q D +++ + FD+ V+N Sbjct: 233 QGDLLAALRPDETFDLAVAN 252 >gi|225076469|ref|ZP_03719668.1| hypothetical protein NEIFLAOT_01515 [Neisseria flavescens NRL30031/H210] gi|224952148|gb|EEG33357.1| hypothetical protein NEIFLAOT_01515 [Neisseria flavescens NRL30031/H210] Length = 371 Score = 42.4 bits (98), Expect = 0.067, Method: Compositional matrix adjust. Identities = 31/125 (24%), Positives = 57/125 (45%), Gaps = 14/125 (11%) Query: 97 DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 ++ D+GTG+G + A+L + + D + KA+ A +N G+++ + D Sbjct: 192 NIQTAFDIGTGSGVIA-AILAKRGIPDIIATDTNPKAIACATANLERLGLNKAVNIQSID 250 Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216 F E D+IV NPP++ + +E +DP ++ +GV +H Sbjct: 251 LFP--ESCADLIVCNPPWLPAKPTS--AIETALYDPNHAM---------LTAFLNGVHKH 297 Query: 217 LNKDG 221 LN +G Sbjct: 298 LNPNG 302 >gi|29828866|ref|NP_823500.1| hypothetical protein SAV_2324 [Streptomyces avermitilis MA-4680] gi|29605971|dbj|BAC70035.1| hypothetical protein [Streptomyces avermitilis MA-4680] Length = 495 Score = 42.4 bits (98), Expect = 0.067, Method: Compositional matrix adjust. Identities = 23/57 (40%), Positives = 33/57 (57%) Query: 93 IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 ++ R+LDLG G G + ALLK+ F + VGVD+S +AL IA + + ER Sbjct: 294 LQASGAARVLDLGCGQGQLVQALLKDVRFTEIVGVDVSVRALTIAARRLKLDRLGER 350 >gi|152964456|ref|YP_001360240.1| methyltransferase small [Kineococcus radiotolerans SRS30216] gi|151358973|gb|ABS01976.1| methyltransferase small [Kineococcus radiotolerans SRS30216] Length = 508 Score = 42.4 bits (98), Expect = 0.067, Method: Compositional matrix adjust. Identities = 39/133 (29%), Positives = 61/133 (45%), Gaps = 13/133 (9%) Query: 95 KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154 + V R+LD+GTG G L + + + D S +AL++A NA N V+ D Q Sbjct: 166 RTPVERVLDIGTGCGIQALHASRHA--RRVTATDTSERALDLAAVNAALNEVA--LDLRQ 221 Query: 155 SDWFSSVEG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212 VE F ++VSNPP+ ++ V ++ R DGG+ G S + + G Sbjct: 222 GSLLEPVEAGEEFGLVVSNPPF----VITPRTAAVPTYEYR---DGGMPGDSLVQRLVGG 274 Query: 213 VSRHLNKDGLCSV 225 V L G+ + Sbjct: 275 VGSVLAPGGVAQL 287 >gi|261324107|ref|ZP_05963304.1| methyltransferase [Brucella neotomae 5K33] gi|261300087|gb|EEY03584.1| methyltransferase [Brucella neotomae 5K33] Length = 295 Score = 42.4 bits (98), Expect = 0.067, Method: Compositional matrix adjust. Identities = 30/115 (26%), Positives = 51/115 (44%), Gaps = 8/115 (6%) Query: 73 EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV-DISC 131 EP + +D A +EK + DLG G G + LK + + K + + + Sbjct: 127 EPGMFSHGAIDKGSALLARHMEKIVFGNVADLGAGWGYLAAQCLKYADWIKNIDLYEADY 186 Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWF----SSVEGLFDVIVSNPPYIESVIVDC 182 +ALE A+ N G S + +WF + G++D ++ NPP+ E + D Sbjct: 187 EALEAARGNLERLGAS---IPISFNWFDVTSEKIAGIYDTVIMNPPFHEGRVTDV 238 >gi|167757655|ref|ZP_02429782.1| hypothetical protein CLORAM_03205 [Clostridium ramosum DSM 1402] gi|237735202|ref|ZP_04565683.1| 16S rRNA m(2)G 1207 methyltransferase [Mollicutes bacterium D7] gi|167702652|gb|EDS17231.1| hypothetical protein CLORAM_03205 [Clostridium ramosum DSM 1402] gi|229381978|gb|EEO32069.1| 16S rRNA m(2)G 1207 methyltransferase [Coprobacillus sp. D7] Length = 197 Score = 42.4 bits (98), Expect = 0.067, Method: Compositional matrix adjust. Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 2/73 (2%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LD+G G G +AL P + +D++ +AL +AK N N + + S + + Sbjct: 61 LLDVGCGYGTFGVALKSAYPALEIDMIDVNERALLLAKQNLAANNLEA--NVYLSSVYEN 118 Query: 161 VEGLFDVIVSNPP 173 V +DVIV+NPP Sbjct: 119 VTNKYDVIVTNPP 131 >gi|57642070|ref|YP_184548.1| 23S rRNA (uracil-5-)-methyltransferase [Thermococcus kodakarensis KOD1] gi|57160394|dbj|BAD86324.1| 23S rRNA (uracil-5-)-methyltransferase [Thermococcus kodakarensis KOD1] Length = 417 Score = 42.4 bits (98), Expect = 0.067, Method: Compositional matrix adjust. Identities = 35/113 (30%), Positives = 56/113 (49%), Gaps = 5/113 (4%) Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPR--IEKRDVVRILDLGTGTGAVCLALLKESP 120 +R L T+ P + +S A +L R E + ++LDL +G G + L K Sbjct: 241 IREKLDDVTYLIHPNSFFQTNSYQAVNLVRKVAELVEGEKVLDLYSGVGTFGIYLAKRG- 299 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173 FK G++I+ A+E+AK NA NGV F + +S+ +D +V +PP Sbjct: 300 -FKVEGIEINPFAVEMAKKNAQINGVDAEFRVGEDKDVNSLSE-YDTVVVDPP 350 >gi|21224309|ref|NP_630088.1| hypothetical protein SCO5972 [Streptomyces coelicolor A3(2)] gi|15020691|emb|CAC44586.1| hypothetical protein [Streptomyces coelicolor A3(2)] Length = 531 Score = 42.4 bits (98), Expect = 0.067, Method: Compositional matrix adjust. Identities = 30/77 (38%), Positives = 40/77 (51%), Gaps = 2/77 (2%) Query: 73 EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCK 132 EP+P T L V A L + R+LDLG G G + LL+E F + VGVD+S + Sbjct: 308 EPKP-TPLAVHRREAI-LTALRDHAAARVLDLGCGEGHLVRELLREPRFTEIVGVDVSVR 365 Query: 133 ALEIAKSNAVTNGVSER 149 AL IA + + ER Sbjct: 366 ALTIASRRLKLDRMGER 382 >gi|23098223|ref|NP_691689.1| RNA methyltransferase [Oceanobacillus iheyensis HTE831] gi|50401583|sp|Q8ES75|Y768_OCEIH RecName: Full=Uncharacterized RNA methyltransferase OB0768 gi|22776448|dbj|BAC12724.1| RNA methyltransferase [Oceanobacillus iheyensis HTE831] Length = 459 Score = 42.4 bits (98), Expect = 0.067, Method: Compositional matrix adjust. Identities = 44/161 (27%), Positives = 83/161 (51%), Gaps = 29/161 (18%) Query: 34 QRFFLTNAIVRSLKHESIHRILG------WRDFY------NVRLTLSSDTF-EPRP-ETE 79 ++F +IV+++ + + +LG W + Y ++ +S +F + P +T+ Sbjct: 236 EQFPQVKSIVQNVNDQRTNVVLGKKTKVLWGENYIYDKIGDLTFAISPKSFFQVNPVQTK 295 Query: 80 LLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKS 139 +L D AL ++ I+K DVV +D G G++ L L +++ K G+++ +A+E AK Sbjct: 296 VLYDKALEYA--NIDKDDVV--IDAYCGIGSISLFLAQKAK--KVYGIEVVPEAIEDAKM 349 Query: 140 NAVTNGVSE------RFDTLQSDWFSSVEGL-FDVIVSNPP 173 NA NG++ + + + W +GL DVIV +PP Sbjct: 350 NAEINGMNNVEFSVGQAEKVMPKW--KEQGLDPDVIVVDPP 388 >gi|116511952|ref|YP_809168.1| Type I restriction-modification system methyltransferase subunit [Lactococcus lactis subsp. cremoris SK11] gi|116107606|gb|ABJ72746.1| Type I restriction-modification system methyltransferase subunit [Lactococcus lactis subsp. cremoris SK11] Length = 462 Score = 42.4 bits (98), Expect = 0.067, Method: Compositional matrix adjust. Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 24/100 (24%) Query: 96 RDVVRILDLGTGTGAVCLALLKESP---------FFKGVGVDISCKALEIAKSNAVTNGV 146 ++ R+ D G+G++ L + KE P FF G +++ +A+ N + + V Sbjct: 139 QEQFRVYDPAMGSGSLLLTVQKELPGGEREGSVEFF---GQELNTTTYNLARMNLMMHDV 195 Query: 147 S------ERFDTLQSDW-FSSVEGL-----FDVIVSNPPY 174 + R DTL +DW + EG FD +V+NPPY Sbjct: 196 NYRNMNLRRADTLDADWPYDEKEGTQIPRKFDAVVANPPY 235 >gi|332291489|ref|YP_004430098.1| methyltransferase small [Krokinobacter diaphorus 4H-3-7-5] gi|332169575|gb|AEE18830.1| methyltransferase small [Krokinobacter diaphorus 4H-3-7-5] Length = 253 Score = 42.4 bits (98), Expect = 0.069, Method: Compositional matrix adjust. Identities = 39/161 (24%), Positives = 72/161 (44%), Gaps = 23/161 (14%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS---DW 157 ILD+GTGTG + L L + S V++ A E A N + +R + ++ Sbjct: 42 ILDIGTGTGVIALMLAQRSDAMTVDAVELDDSAYEQAADNFENSVWGDRLFCYHAHLYEF 101 Query: 158 FSSVEGLFDVIVSNPP-YIESV------------IVDCLGLEVRDFDPRISLDGGIDGLS 204 + ++ +D+IV NPP Y+E++ I D +E R+ ++ Sbjct: 102 AAEIDDEYDLIVCNPPFYMETLNDESTALQRSRSIKDGAAIEARE-------QARLEESM 154 Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245 + + V++ L++DG SV I + ++ D + + LF Sbjct: 155 PFELLVGAVAKLLSEDGAFSVIIPHEREDDFILLCSRAGLF 195 >gi|261197353|ref|XP_002625079.1| S-adenosylmethionine-dependent methyltransferase [Ajellomyces dermatitidis SLH14081] gi|239595709|gb|EEQ78290.1| S-adenosylmethionine-dependent methyltransferase [Ajellomyces dermatitidis SLH14081] Length = 379 Score = 42.4 bits (98), Expect = 0.069, Method: Compositional matrix adjust. Identities = 37/123 (30%), Positives = 59/123 (47%), Gaps = 40/123 (32%) Query: 101 ILDLGTGTGAVCLALLKESPFFKG---VGVDISCKALEIAK--------SNAVTNGVSE- 148 ILDLGTG G++ LALL++ F G VGVD S K++E+A+ S++ +G ++ Sbjct: 147 ILDLGTGNGSM-LALLRDEGGFTGGQMVGVDYSPKSIELARRLHHHRHDSSSTRDGGADT 205 Query: 149 ------------RFDTL---------QSDWFSSVEGLFDVIVSNPPY------IESVIVD 181 RF+ + DWF + +G FD+++ + E V+VD Sbjct: 206 AARTTTSGTPAIRFEVWDVFDKRAVEELDWFPAAQGGFDIVLDKGTFDAISLSAEEVVVD 265 Query: 182 CLG 184 G Sbjct: 266 VGG 268 >gi|308231588|ref|ZP_07413001.2| benzoquinone methyltransferase [Mycobacterium tuberculosis SUMu001] gi|308369432|ref|ZP_07417752.2| benzoquinone methyltransferase [Mycobacterium tuberculosis SUMu002] gi|308370447|ref|ZP_07421523.2| benzoquinone methyltransferase [Mycobacterium tuberculosis SUMu003] gi|308371706|ref|ZP_07425893.2| benzoquinone methyltransferase [Mycobacterium tuberculosis SUMu004] gi|308372931|ref|ZP_07430423.2| benzoquinone methyltransferase [Mycobacterium tuberculosis SUMu005] gi|308374042|ref|ZP_07434610.2| benzoquinone methyltransferase [Mycobacterium tuberculosis SUMu006] gi|308375194|ref|ZP_07443044.2| benzoquinone methyltransferase [Mycobacterium tuberculosis SUMu007] gi|308376441|ref|ZP_07438834.2| benzoquinone methyltransferase [Mycobacterium tuberculosis SUMu008] gi|308377459|ref|ZP_07479236.2| benzoquinone methyltransferase [Mycobacterium tuberculosis SUMu009] gi|308378671|ref|ZP_07483429.2| benzoquinone methyltransferase [Mycobacterium tuberculosis SUMu010] gi|308379813|ref|ZP_07487662.2| benzoquinone methyltransferase [Mycobacterium tuberculosis SUMu011] gi|308395844|ref|ZP_07492167.2| benzoquinone methyltransferase [Mycobacterium tuberculosis SUMu012] gi|308216770|gb|EFO76169.1| benzoquinone methyltransferase [Mycobacterium tuberculosis SUMu001] gi|308327629|gb|EFP16480.1| benzoquinone methyltransferase [Mycobacterium tuberculosis SUMu002] gi|308331984|gb|EFP20835.1| benzoquinone methyltransferase [Mycobacterium tuberculosis SUMu003] gi|308335771|gb|EFP24622.1| benzoquinone methyltransferase [Mycobacterium tuberculosis SUMu004] gi|308339377|gb|EFP28228.1| benzoquinone methyltransferase [Mycobacterium tuberculosis SUMu005] gi|308343253|gb|EFP32104.1| benzoquinone methyltransferase [Mycobacterium tuberculosis SUMu006] gi|308347145|gb|EFP35996.1| benzoquinone methyltransferase [Mycobacterium tuberculosis SUMu007] gi|308351083|gb|EFP39934.1| benzoquinone methyltransferase [Mycobacterium tuberculosis SUMu008] gi|308355719|gb|EFP44570.1| benzoquinone methyltransferase [Mycobacterium tuberculosis SUMu009] gi|308359674|gb|EFP48525.1| benzoquinone methyltransferase [Mycobacterium tuberculosis SUMu010] gi|308363579|gb|EFP52430.1| benzoquinone methyltransferase [Mycobacterium tuberculosis SUMu011] gi|308367215|gb|EFP56066.1| benzoquinone methyltransferase [Mycobacterium tuberculosis SUMu012] gi|323721034|gb|EGB30098.1| benzoquinone methyltransferase [Mycobacterium tuberculosis CDC1551A] Length = 225 Score = 42.4 bits (98), Expect = 0.069, Method: Compositional matrix adjust. Identities = 29/98 (29%), Positives = 49/98 (50%), Gaps = 13/98 (13%) Query: 73 EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCK 132 EP+PE L+ ++ + +LD+G G A+ LAL + VG+D+S Sbjct: 32 EPQPELAALI----------VQGKFRGDVLDVGCGEAAISLALAERG--HTTVGLDLSPA 79 Query: 133 ALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEGLFDVIV 169 A+E+A+ A G++ F+ + F+ +G FD IV Sbjct: 80 AVELARHEAAKRGLANASFEVADASSFTGYDGRFDTIV 117 >gi|118473287|ref|YP_886258.1| transferase [Mycobacterium smegmatis str. MC2 155] gi|118174574|gb|ABK75470.1| transferase [Mycobacterium smegmatis str. MC2 155] Length = 499 Score = 42.4 bits (98), Expect = 0.069, Method: Compositional matrix adjust. Identities = 46/137 (33%), Positives = 65/137 (47%), Gaps = 15/137 (10%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+LDLGTG G L L S V D + +AL +A + A NG+S +D F Sbjct: 162 RVLDLGTGCGIQALHLDAHSDHI--VATDTNARALALAAATARLNGMS--WDLRHGSLFE 217 Query: 160 SVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 V G FD+IVSNPP++ +G RD+ I D G+ G + + + + V HLN Sbjct: 218 PVAGERFDLIVSNPPFV-------VGSGARDY---IYRDSGMAGDTVCQKLIEQVGDHLN 267 Query: 219 KDGLCSVEIGYNQKVDV 235 G + + K D Sbjct: 268 PGGTAHIMANWIVKRDT 284 >gi|238793780|ref|ZP_04637401.1| Methyltransferase small [Yersinia intermedia ATCC 29909] gi|238726844|gb|EEQ18377.1| Methyltransferase small [Yersinia intermedia ATCC 29909] Length = 259 Score = 42.4 bits (98), Expect = 0.069, Method: Compositional matrix adjust. Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 4/85 (4%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 ++LD+G G+G + L + + S + GV++ +A A SNA + +ER + D Sbjct: 61 KVLDIGCGSGLIALMIAQRSTSEVLIDGVELEPEAARQASSNAALSPWAERVCIYEQDVH 120 Query: 159 SSVEG---LFDVIVSNPPYIESVIV 180 E +D+IVSNPPY + Sbjct: 121 QFAENHSHQYDLIVSNPPYFAPAVA 145 >gi|330828265|ref|YP_004391217.1| tRNA (adenine-N(6)-)-methyltransferase [Aeromonas veronii B565] gi|328803401|gb|AEB48600.1| tRNA (adenine-N(6)-)-methyltransferase [Aeromonas veronii B565] Length = 236 Score = 42.4 bits (98), Expect = 0.070, Method: Compositional matrix adjust. Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 5/78 (6%) Query: 100 RILDLGTGTGAVCLALLKESPF---FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 R+LD+GTG+G + L L + S V +DI+ A A+ NA + ++R ++S Sbjct: 41 RVLDIGTGSGLIALMLAQRSRSDCRLDAVELDIN--AASQARENAAASPWADRVTVIESA 98 Query: 157 WFSSVEGLFDVIVSNPPY 174 +D++VSNPPY Sbjct: 99 IQDYQADPYDLVVSNPPY 116 >gi|325697040|gb|EGD38927.1| ribosomal RNA small subunit methyltransferase D [Streptococcus sanguinis SK160] gi|328945608|gb|EGG39759.1| ribosomal RNA small subunit methyltransferase D [Streptococcus sanguinis SK1087] Length = 182 Score = 42.4 bits (98), Expect = 0.070, Method: Compositional matrix adjust. Identities = 35/131 (26%), Positives = 58/131 (44%), Gaps = 16/131 (12%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD--- 156 R+LDL G+G++ + + V V+ +A I N SERFD L+ + Sbjct: 47 RVLDLYAGSGSLAIEAISRG-METAVLVEKDRRAQAIISENIQMTKESERFDLLKMESGR 105 Query: 157 WFSSVEGLFDVIVSNPPYI-ESVIVDCLGLEVRDF-----------DPRISLDGGIDGLS 204 ++ G FD+++ +PPY E ++ D LE R D + L I GL Sbjct: 106 ALDTLTGAFDLVLLDPPYAKEQIVADLEKLEKRQLLSQDVLVVCETDKEVELPEEIAGLG 165 Query: 205 HYRTIADGVSR 215 ++ G+S+ Sbjct: 166 IWKQKIYGISK 176 >gi|115760358|ref|XP_001198852.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] gi|115949723|ref|XP_001184273.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] Length = 620 Score = 42.4 bits (98), Expect = 0.070, Method: Compositional matrix adjust. Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 10/90 (11%) Query: 89 SLPRIEK--RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG- 145 S+P+IE+ + +RILDLG G G L + P VG+D S +A+ K A G Sbjct: 423 SMPQIEEQMKSGIRILDLGCGRGLASLVFAENYPNSTVVGLDFSEEAINYGKERAKEKGL 482 Query: 146 -----VSERFDTLQSDWFSSVEGL--FDVI 168 V E + DW ++++ + FDVI Sbjct: 483 TNVEFVCEDAACIPDDWNNTIDYIYTFDVI 512 >gi|108762169|ref|YP_629399.1| ribosomal protein L11 methyltransferase [Myxococcus xanthus DK 1622] gi|123248086|sp|Q1DD74|PRMA_MYXXD RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11 Mtase gi|108466049|gb|ABF91234.1| ribosomal protein L11 methyltransferase [Myxococcus xanthus DK 1622] Length = 288 Score = 42.4 bits (98), Expect = 0.070, Method: Compositional matrix adjust. Identities = 37/137 (27%), Positives = 65/137 (47%), Gaps = 8/137 (5%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LD+GTGTG + +A K+ + V D ++E+A+ N NG + + + Sbjct: 160 VLDVGTGTGVLAIA-AKKLGAGRTVATDNDPISVELAQENQAENGTPDI--EVSGKELTQ 216 Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220 VEG FD++++N + + +++ L V R+ L G LSH R + R+L Sbjct: 217 VEGTFDLVLAN--ILANTLIELAPLIVAKTKDRLVLAG---VLSHQRADVEAAYRNLGLT 271 Query: 221 GLCSVEIGYNQKVDVVR 237 L G ++D+ R Sbjct: 272 VLTGATQGEWVRIDLQR 288 >gi|302556027|ref|ZP_07308369.1| methyltransferase [Streptomyces viridochromogenes DSM 40736] gi|302473645|gb|EFL36738.1| methyltransferase [Streptomyces viridochromogenes DSM 40736] Length = 217 Score = 42.4 bits (98), Expect = 0.070, Method: Compositional matrix adjust. Identities = 35/107 (32%), Positives = 52/107 (48%), Gaps = 10/107 (9%) Query: 72 FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131 + P+ +TELL + LP +LD+GTG LAL F VD+S Sbjct: 10 YAPQEDTELLAGALFDEPLP-----TGAAVLDVGTG--TGALALEAARRGFDVTAVDVSR 62 Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIES 177 +A+ A+ NA G+ R + F V G FD+I++NPPY+ + Sbjct: 63 RAVWAARLNAARAGLLVRIR--HGNLFDPVLGESFDLILANPPYVPA 107 >gi|170291018|ref|YP_001737834.1| methylase [Candidatus Korarchaeum cryptofilum OPF8] gi|170175098|gb|ACB08151.1| methylase [Candidatus Korarchaeum cryptofilum OPF8] Length = 181 Score = 42.4 bits (98), Expect = 0.070, Method: Compositional matrix adjust. Identities = 29/75 (38%), Positives = 39/75 (52%), Gaps = 5/75 (6%) Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 LDLGTG+G V + + K V DIS ++ +A NA NG+ T+Q D Sbjct: 33 LDLGTGSGIVAIEMAKRG--CCTVASDISPRSCLLASRNAELNGLE--VHTVQGDMTRHF 88 Query: 162 EGL-FDVIVSNPPYI 175 L FD+I NPPY+ Sbjct: 89 RDLAFDLIAFNPPYL 103 >gi|154488912|ref|ZP_02029761.1| hypothetical protein BIFADO_02221 [Bifidobacterium adolescentis L2-32] gi|154083049|gb|EDN82094.1| hypothetical protein BIFADO_02221 [Bifidobacterium adolescentis L2-32] Length = 214 Score = 42.4 bits (98), Expect = 0.070, Method: Compositional matrix adjust. Identities = 27/72 (37%), Positives = 40/72 (55%), Gaps = 2/72 (2%) Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 LDLG G G + L L ESP +D++ +ALE+ + NA NG+ + ++ +V Sbjct: 76 LDLGCGWGPIALTLGFESPKADIWALDVNERALELTRRNAELNGMG-NIHAVTAEQVPAV 134 Query: 162 EGLFDVIVSNPP 173 FD+I SNPP Sbjct: 135 L-TFDLIWSNPP 145 >gi|260911716|ref|ZP_05918292.1| methyltransferase [Prevotella sp. oral taxon 472 str. F0295] gi|260634141|gb|EEX52255.1| methyltransferase [Prevotella sp. oral taxon 472 str. F0295] Length = 235 Score = 42.4 bits (98), Expect = 0.072, Method: Compositional matrix adjust. Identities = 31/89 (34%), Positives = 46/89 (51%), Gaps = 15/89 (16%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN----------AVTNGVSER 149 ILD+GTGTG + L L + + GV+++ +A A+ N + N +R Sbjct: 37 HILDIGTGTGLIALMLAQRCQDAEITGVELNEQAALQAEENVDASPFAHQITIENVPIQR 96 Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPYIESV 178 F +LQ S+ G FD IVSNPP+ S+ Sbjct: 97 F-SLQ----PSLHGHFDSIVSNPPFYHSL 120 >gi|182412488|ref|YP_001817554.1| methyltransferase small [Opitutus terrae PB90-1] gi|177839702|gb|ACB73954.1| methyltransferase small [Opitutus terrae PB90-1] Length = 271 Score = 42.4 bits (98), Expect = 0.072, Method: Compositional matrix adjust. Identities = 36/142 (25%), Positives = 56/142 (39%), Gaps = 33/142 (23%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R +D G+G G + + K +G+++ + A+ NAV NGV+ER D L SD ++ Sbjct: 54 RGIDWGSGVGCLAIVAAKVPSVEFVLGLELYGPNVRTARDNAVCNGVAERTDFLCSDSYA 113 Query: 160 S-----------VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208 + G + I++NPP E G DG R Sbjct: 114 PRLPDDREKLELLAGRTEFILANPPSSE----------------------GDDGFEFRRI 151 Query: 209 IADGVSRHLNKDGLCSVEIGYN 230 + G R+L G + I Y Sbjct: 152 VLRGARRYLVPGGAVLLNISYQ 173 >gi|239825614|ref|YP_002948238.1| methyltransferase small [Geobacillus sp. WCH70] gi|239805907|gb|ACS22972.1| methyltransferase small [Geobacillus sp. WCH70] Length = 249 Score = 42.4 bits (98), Expect = 0.072, Method: Compositional matrix adjust. Identities = 24/83 (28%), Positives = 45/83 (54%), Gaps = 5/83 (6%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 +I+DL TG G + L LL K +G++I + ++AK + NG+ ++ + + D Sbjct: 48 QIVDLCTGNGVIPL-LLSMRTKGKIIGIEIQERLCDMAKRSVQYNGLEKQIEIIHGDIKD 106 Query: 160 SVEGL----FDVIVSNPPYIESV 178 + + L +DV+ NPPY ++ Sbjct: 107 APKQLGYSKYDVVTCNPPYFPTI 129 >gi|54025744|ref|YP_119986.1| hypothetical protein nfa37740 [Nocardia farcinica IFM 10152] gi|54017252|dbj|BAD58622.1| hypothetical protein [Nocardia farcinica IFM 10152] Length = 523 Score = 42.4 bits (98), Expect = 0.072, Method: Compositional matrix adjust. Identities = 28/81 (34%), Positives = 43/81 (53%), Gaps = 5/81 (6%) Query: 96 RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155 R V +LDLGTG G A+ S G D++ +AL +A++ A N + + + Sbjct: 177 RRVGSVLDLGTGCG--VQAVHAASYADHVTGTDVNPRALWLAEATAALNELD--IELVAG 232 Query: 156 DWFSSVEGL-FDVIVSNPPYI 175 WF V G FD +V+NPP++ Sbjct: 233 SWFEPVVGRRFDQVVANPPFV 253 >gi|289551659|ref|YP_003472563.1| 16S rRNA m(2)G 1207 methyltransferase [Staphylococcus lugdunensis HKU09-01] gi|289181190|gb|ADC88435.1| 16S rRNA m(2)G 1207 methyltransferase [Staphylococcus lugdunensis HKU09-01] Length = 202 Score = 42.4 bits (98), Expect = 0.072, Method: Compositional matrix adjust. Identities = 36/135 (26%), Positives = 62/135 (45%), Gaps = 15/135 (11%) Query: 40 NAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV 99 IV S +H+ + + F ++ SD LL+ + L P K Sbjct: 16 QTIVYSYQHDKLQLVTDAGVFSKDKVDFGSD---------LLIQTFLNEHPPGPSKS--- 63 Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 I+D+G G G + L + K P K +D++ +AL +A+ N+ N + + +SD S Sbjct: 64 -IVDVGCGYGPIGLTIAKVCPHHKVTMLDVNQRALALAEKNSKHNQI-DNVIIKESDGLS 121 Query: 160 SVE-GLFDVIVSNPP 173 +V+ D I++NPP Sbjct: 122 AVKHNACDYILTNPP 136 >gi|126664959|ref|ZP_01735942.1| nucleotide methyltransferase, putative [Marinobacter sp. ELB17] gi|126630329|gb|EBA00944.1| nucleotide methyltransferase, putative [Marinobacter sp. ELB17] Length = 419 Score = 42.4 bits (98), Expect = 0.072, Method: Compositional matrix adjust. Identities = 25/81 (30%), Positives = 41/81 (50%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LDL G G + LA L + + D+S +A+ A +NA F +D + Sbjct: 280 QVLDLACGNGVLGLAALAANSHLELTFSDVSSQAVISAATNAAREFPQSAFSFRHADSIA 339 Query: 160 SVEGLFDVIVSNPPYIESVIV 180 + G FD+I+ NPP+ E +V Sbjct: 340 ADGGEFDLILLNPPFHEGGVV 360 >gi|71282296|ref|YP_267461.1| ribosomal RNA small subunit methyltransferase D [Colwellia psychrerythraea 34H] gi|123633824|sp|Q488Q3|RLMG_COLP3 RecName: Full=Ribosomal RNA large subunit methyltransferase G; AltName: Full=23S rRNA m2G1835 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rlmG gi|71148036|gb|AAZ28509.1| ribosomal RNA small subunit methyltransferase D [Colwellia psychrerythraea 34H] Length = 392 Score = 42.4 bits (98), Expect = 0.072, Method: Compositional matrix adjust. Identities = 33/115 (28%), Positives = 55/115 (47%), Gaps = 6/115 (5%) Query: 89 SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN--GV 146 +LP + V +DLG G G + L +L P +D S A+ AK N +TN V Sbjct: 240 NLPTVAANSTV--IDLGCGNGVIGLTVLANQPEAHVQFIDESTMAISSAKQNIMTNLPDV 297 Query: 147 SERFDTLQSDWFSSVE-GLFDVIVSNPPYIE-SVIVDCLGLEVRDFDPRISLDGG 199 E+ + +D + +E G D+I+ NPP+ + + D + ++ R+ GG Sbjct: 298 IEQCEFTLNDSLTDIEGGSVDLILCNPPFHQNTATTDHIAWQMFKDSHRVLKKGG 352 >gi|325967647|ref|YP_004243839.1| methyltransferase [Vulcanisaeta moutnovskia 768-28] gi|323706850|gb|ADY00337.1| methyltransferase [Vulcanisaeta moutnovskia 768-28] Length = 214 Score = 42.4 bits (98), Expect = 0.073, Method: Compositional matrix adjust. Identities = 29/78 (37%), Positives = 46/78 (58%), Gaps = 7/78 (8%) Query: 100 RILDLGTGTG--AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 R+LDLG GTG A+ AL+ + + +DI +AL IA+ +A G+S D + +D Sbjct: 59 RVLDLGCGTGRFAIAAALMGVR---QVICIDIDPEALAIARESASKYGLSN-VDFITNDI 114 Query: 158 FS-SVEGLFDVIVSNPPY 174 + ++ G FDV+ NPP+ Sbjct: 115 RNMAIMGRFDVVFQNPPF 132 >gi|290508240|ref|ZP_06547611.1| O-methyltransferase [Klebsiella sp. 1_1_55] gi|289777634|gb|EFD85631.1| O-methyltransferase [Klebsiella sp. 1_1_55] Length = 245 Score = 42.4 bits (98), Expect = 0.073, Method: Compositional matrix adjust. Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 16/88 (18%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI-------AKSNAVTNGVSERF 150 V +LD+G G+G + L L + + G D+ A+E+ A+ NA+ + S R Sbjct: 45 VKHVLDIGAGSGLLALMLAQRT------GHDVQVDAVELDEEAAAQARENALASPWSSRI 98 Query: 151 DTLQSD---WFSSVEGLFDVIVSNPPYI 175 + Q+D W S +++I+SNPP+ Sbjct: 99 EICQADIHQWQPSQTRRYELIISNPPFF 126 >gi|217967343|ref|YP_002352849.1| ribosomal protein L11 methyltransferase [Dictyoglomus turgidum DSM 6724] gi|226710074|sp|B8E1A7|PRMA_DICTD RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11 Mtase gi|217336442|gb|ACK42235.1| ribosomal protein L11 methyltransferase [Dictyoglomus turgidum DSM 6724] Length = 299 Score = 42.4 bits (98), Expect = 0.073, Method: Compositional matrix adjust. Identities = 26/71 (36%), Positives = 42/71 (59%), Gaps = 3/71 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LD+GTG+G + + + K+ K GVDI KA+E+AK NA N V F ++D Sbjct: 167 VLDVGTGSGILSI-VAKKLGGDKVKGVDIDEKAIEVAKKNAEGNHVEVEFQ--KNDLIDG 223 Query: 161 VEGLFDVIVSN 171 + +D++V+N Sbjct: 224 INEKYDIVVAN 234 >gi|90413380|ref|ZP_01221373.1| ribosomal protein L11 methyltransferase [Photobacterium profundum 3TCK] gi|90325622|gb|EAS42091.1| ribosomal protein L11 methyltransferase [Photobacterium profundum 3TCK] Length = 294 Score = 42.4 bits (98), Expect = 0.073, Method: Compositional matrix adjust. Identities = 35/112 (31%), Positives = 60/112 (53%), Gaps = 17/112 (15%) Query: 74 PRPET-ELLVDSALAFS----------LPRIEKRDVV--RILDLGTGTGAVCLALLKESP 120 P P+ +L+D LAF L ++ +D+ I+D G G+G + +A LK Sbjct: 123 PEPDAVNVLLDPGLAFGTGTHPTTSLCLEWLDGQDLTGQTIIDFGCGSGILAIAALKLG- 181 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFSSVEGLFDVIVSN 171 K +G+DI +A++ ++ NA NGVS++ + L D + V+ DV+V+N Sbjct: 182 AKKVIGIDIDPQAIQASRDNAERNGVSDKLELFLPKDQPTDVQA--DVVVAN 231 >gi|88602617|ref|YP_502795.1| O-methyltransferase family protein [Methanospirillum hungatei JF-1] gi|88188079|gb|ABD41076.1| O-methyltransferase, family 2 [Methanospirillum hungatei JF-1] Length = 339 Score = 42.4 bits (98), Expect = 0.074, Method: Compositional matrix adjust. Identities = 36/119 (30%), Positives = 62/119 (52%), Gaps = 7/119 (5%) Query: 54 ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113 I+ R+F ++ T S ++ +++V L SLP E R+LDLG G G + + Sbjct: 130 IMSSREFQEMQ-TRGSINYQRSGMAQIVV--KLISSLP--EYNGFSRMLDLGCGPGLLGI 184 Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS-SVEGLFDVIVSN 171 AL+ + P GV D A E+A+ A GVS+R + D+ + S+ +D+I+++ Sbjct: 185 ALILDHPTMNGVLFDQPPVA-EVARRCAAEYGVSDRVTVMSGDYLNDSIGEEYDLILAS 242 >gi|89055180|ref|YP_510631.1| SAM-dependent methyltransferase [Jannaschia sp. CCS1] gi|88864729|gb|ABD55606.1| SAM-dependent methyltransferase [Jannaschia sp. CCS1] Length = 398 Score = 42.4 bits (98), Expect = 0.074, Method: Compositional matrix adjust. Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 6/53 (11%) Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPP 173 VD S AL++A A G +ERF T Q D F+ +E L FD+++++PP Sbjct: 253 VDASDPALQLAGQGAKAMGCAERFATRQGDAFAVMEALAAEGETFDIVIADPP 305 >gi|319951337|ref|ZP_08025167.1| putative RNA methyltransferase [Dietzia cinnamea P4] gi|319435000|gb|EFV90290.1| putative RNA methyltransferase [Dietzia cinnamea P4] Length = 422 Score = 42.4 bits (98), Expect = 0.075, Method: Compositional matrix adjust. Identities = 30/98 (30%), Positives = 47/98 (47%), Gaps = 8/98 (8%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD-WFS 159 + D+GTGTG V A+L V DI+ +A++ A+ N G+ +R ++ D W Sbjct: 228 VWDIGTGTG-VLAAVLARRGARAVVASDINPRAVQCARGNVRRLGLEDRVTVVRGDLWPG 286 Query: 160 SVEGLF------DVIVSNPPYIESVIVDCLGLEVRDFD 191 +G+ DV+V NPP+I L + D D Sbjct: 287 DDDGVVNRSGRADVVVCNPPWIPGRPTSALEQGIYDPD 324 >gi|294155919|ref|YP_003560303.1| type I restriction-modification system, methyltransferase [Mycoplasma crocodyli MP145] gi|291600214|gb|ADE19710.1| type I restriction-modification system, methyltransferase [Mycoplasma crocodyli MP145] Length = 523 Score = 42.4 bits (98), Expect = 0.075, Method: Compositional matrix adjust. Identities = 28/109 (25%), Positives = 52/109 (47%), Gaps = 10/109 (9%) Query: 72 FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK--ESPFFKGVGVDI 129 F P+ ++ L + L + +D+ + D G+G++ L K +P+ G + Sbjct: 207 FTPQEVSKFLANVTLVYK----NSKDIYSVYDPTCGSGSLLLKFKKILNNPYLHFSGQES 262 Query: 130 SCKALEIAKSNAVTNGVS-ERFDTLQSDWFSS---VEGLFDVIVSNPPY 174 + ++K N + +GV ++ D D + +E FDV+VSNPPY Sbjct: 263 NPTTFSLSKMNLIIHGVEFDKIDLKCGDTLNDPLHLEKKFDVVVSNPPY 311 >gi|91226789|ref|ZP_01261442.1| hypothetical protein V12G01_13469 [Vibrio alginolyticus 12G01] gi|91188920|gb|EAS75204.1| hypothetical protein V12G01_13469 [Vibrio alginolyticus 12G01] Length = 239 Score = 42.4 bits (98), Expect = 0.075, Method: Compositional matrix adjust. Identities = 25/86 (29%), Positives = 40/86 (46%), Gaps = 1/86 (1%) Query: 93 IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152 ++ + +ILD+GTGTG + L + + VDI A+ A+ N + S+R Sbjct: 38 VQSPNDAKILDIGTGTGLLALMCAQRFTEAQITAVDIELTAVAAAQKNMAQSPWSDRVSV 97 Query: 153 LQSDWFS-SVEGLFDVIVSNPPYIES 177 +D + F I+ NPPY S Sbjct: 98 HHTDILHFTPTHPFQRIICNPPYFNS 123 >gi|15894164|ref|NP_347513.1| cyclopropane fatty acid synthase [Clostridium acetobutylicum ATCC 824] gi|15023773|gb|AAK78853.1|AE007603_4 Cyclopropane fatty acid synthase [Clostridium acetobutylicum ATCC 824] gi|325508292|gb|ADZ19928.1| Cyclopropane fatty acid synthase [Clostridium acetobutylicum EA 2018] Length = 391 Score = 42.4 bits (98), Expect = 0.075, Method: Compositional matrix adjust. Identities = 38/138 (27%), Positives = 60/138 (43%), Gaps = 7/138 (5%) Query: 38 LTNAIVRSLKHESIHRILGWRDFYNVRL----TLSSDTFE-PRPETELLVDSALAFSLPR 92 L N I +S K H +G DFY + L T S F+ P E + + L + Sbjct: 103 LPNTIRKSKKDIKFHYDIG-NDFYKLWLDKTMTYSCGYFKSPNDSLEQAQKNKVEHILKK 161 Query: 93 IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152 + + V +LD+G G G + + KE K +GV +S + ++ K G+ R D Sbjct: 162 LSLKKDVTLLDIGCGWGELIITAAKEYGV-KALGVTLSEEQFKVVKERVKKEGLEGRVDV 220 Query: 153 LQSDWFSSVEGLFDVIVS 170 + D+ FD +VS Sbjct: 221 ILEDYREIKNRTFDRVVS 238 >gi|261820511|ref|YP_003258617.1| methyltransferase small [Pectobacterium wasabiae WPP163] gi|261604524|gb|ACX87010.1| methyltransferase small [Pectobacterium wasabiae WPP163] Length = 248 Score = 42.4 bits (98), Expect = 0.075, Method: Compositional matrix adjust. Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 4/79 (5%) Query: 100 RILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW- 157 RILD+G+G+G + L L + S P + V++ A + AK N + ++R D Sbjct: 50 RILDIGSGSGLLALMLAQRSEPHVRVDAVELDSAASQQAKENMAASPWADRVTVYAEDIV 109 Query: 158 -FSSVEGL-FDVIVSNPPY 174 F+++ + +IVSNPPY Sbjct: 110 DFAAMRSTDYSLIVSNPPY 128 >gi|152971431|ref|YP_001336540.1| putative enzyme [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|262040310|ref|ZP_06013561.1| SAM-dependent methyltransferase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|330007679|ref|ZP_08306018.1| methyltransferase small domain protein [Klebsiella sp. MS 92-3] gi|262828519|sp|A6TCI9|TRMN6_KLEP7 RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName: Full=tRNA m6A37 methyltransferase gi|150956280|gb|ABR78310.1| putative enzyme [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|259042419|gb|EEW43439.1| SAM-dependent methyltransferase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|328535360|gb|EGF61842.1| methyltransferase small domain protein [Klebsiella sp. MS 92-3] Length = 245 Score = 42.4 bits (98), Expect = 0.075, Method: Compositional matrix adjust. Identities = 25/88 (28%), Positives = 46/88 (52%), Gaps = 16/88 (18%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI-------AKSNAVTNGVSERF 150 V +LD+G G+G + L L + + G D+ +A+E+ A+ NA+ + + R Sbjct: 45 VKHVLDIGAGSGLLALMLAQRT------GDDVHVEAVELDEEAAAQARENALASPWASRI 98 Query: 151 DTLQSD---WFSSVEGLFDVIVSNPPYI 175 + Q+D W S +++I+SNPP+ Sbjct: 99 EVWQADIHQWQPSQTRRYELIISNPPFF 126 >gi|254291901|ref|ZP_04962683.1| conserved hypothetical protein [Vibrio cholerae AM-19226] gi|150422187|gb|EDN14152.1| conserved hypothetical protein [Vibrio cholerae AM-19226] Length = 240 Score = 42.4 bits (98), Expect = 0.075, Method: Compositional matrix adjust. Identities = 26/80 (32%), Positives = 37/80 (46%), Gaps = 5/80 (6%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD---W 157 ILD+G GTG + L + P +DI A + A+ N + +ER + +D W Sbjct: 46 ILDIGCGTGLLSLMCAQRFPQAHITALDIEQSAYQAAEHNRQQSPWAERIECQHADILHW 105 Query: 158 FSSVEGLFDVIVSNPPYIES 177 S F I+ NPPY S Sbjct: 106 QPSKR--FAAIICNPPYFNS 123 >gi|78101439|pdb|2AS0|A Chain A, Crystal Structure Of Ph1915 (Apc 5817): A Hypothetical Rna Methyltransferase gi|78101440|pdb|2AS0|B Chain B, Crystal Structure Of Ph1915 (Apc 5817): A Hypothetical Rna Methyltransferase Length = 396 Score = 42.4 bits (98), Expect = 0.075, Method: Compositional matrix adjust. Identities = 29/82 (35%), Positives = 42/82 (51%), Gaps = 11/82 (13%) Query: 100 RILDLGTGTG--AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 R+LD+ T TG A+ A+ +G+D S +A+E AK NA NGV +R + Sbjct: 220 RVLDVFTYTGGFAIHAAIAGADEV---IGIDKSPRAIETAKENAKLNGVEDRXKFIVGSA 276 Query: 158 FSSVEGL------FDVIVSNPP 173 F E L FD++V +PP Sbjct: 277 FEEXEKLQKKGEKFDIVVLDPP 298 >gi|327354985|gb|EGE83842.1| S-adenosylmethionine-dependent methyltransferase [Ajellomyces dermatitidis ATCC 18188] Length = 379 Score = 42.4 bits (98), Expect = 0.076, Method: Compositional matrix adjust. Identities = 37/123 (30%), Positives = 59/123 (47%), Gaps = 40/123 (32%) Query: 101 ILDLGTGTGAVCLALLKESPFFKG---VGVDISCKALEIAK--------SNAVTNGVSE- 148 ILDLGTG G++ LALL++ F G VGVD S K++E+A+ S++ +G ++ Sbjct: 147 ILDLGTGNGSM-LALLRDEGGFTGGQMVGVDYSPKSIELARRLHHHRHDSSSTRDGGADT 205 Query: 149 ------------RFDTL---------QSDWFSSVEGLFDVIVSNPPY------IESVIVD 181 RF+ + DWF + +G FD+++ + E V+VD Sbjct: 206 AARTTTSGTPAIRFEVWDVFDKRAVEELDWFPAAQGGFDIVLDKGTFDAISLSAEEVVVD 265 Query: 182 CLG 184 G Sbjct: 266 VGG 268 >gi|34762348|ref|ZP_00143351.1| 16S rRNA m(2)G 1207 methyltransferase [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|27888002|gb|EAA25066.1| 16S rRNA m(2)G 1207 methyltransferase [Fusobacterium nucleatum subsp. vincentii ATCC 49256] Length = 223 Score = 42.4 bits (98), Expect = 0.076, Method: Compositional matrix adjust. Identities = 29/99 (29%), Positives = 56/99 (56%), Gaps = 8/99 (8%) Query: 83 DSALAFSL--PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG-VGVDISCKALEIAKS 139 D+ L F L + K+++ ++LD+GTG G + + LL ++ F +G+DI + ++ A Sbjct: 29 DTILLFKLFQASLNKKNI-KLLDIGTGNGILPI-LLSDNEFLSELIGIDIQKENIDRANM 86 Query: 140 NAVTNGVSE--RFDTLQSDWFSSVEGLFDVIVSNPPYIE 176 N + + +F+ + + + FDVI+SNPPY++ Sbjct: 87 ALELNKIEKNIQFECMDIREYKN-SNYFDVIISNPPYMD 124 >gi|326336150|ref|ZP_08202322.1| SAM-dependent methyltransferase [Capnocytophaga sp. oral taxon 338 str. F0234] gi|325691659|gb|EGD33626.1| SAM-dependent methyltransferase [Capnocytophaga sp. oral taxon 338 str. F0234] Length = 234 Score = 42.0 bits (97), Expect = 0.076, Method: Compositional matrix adjust. Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 3/78 (3%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD--W 157 RILD+G GTG + L + + P ++I+ +A + + N + +R Q D Sbjct: 36 RILDIGAGTGILSLMMAQRFPTACIHAIEITPEATQECRENISLSPWKDRISVYQEDIRI 95 Query: 158 FSSVEG-LFDVIVSNPPY 174 FS V+ +D+I+SNPP+ Sbjct: 96 FSKVDKHKYDLIISNPPF 113 >gi|291533514|emb|CBL06627.1| Predicted O-methyltransferase [Megamonas hypermegale ART12/1] Length = 251 Score = 42.0 bits (97), Expect = 0.076, Method: Compositional matrix adjust. Identities = 29/83 (34%), Positives = 40/83 (48%), Gaps = 6/83 (7%) Query: 96 RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155 R + LDLGTGTG + L L + K ++I+ EIAK N V N + ++ + Sbjct: 48 RKNAKGLDLGTGTGVIPLLLSNRA--MKMDALEINPVTCEIAKRNMVMNKLQDKICVQEG 105 Query: 156 DWFSSVEGL----FDVIVSNPPY 174 D E D +VSNPPY Sbjct: 106 DLCKIKEYYKPQSMDFVVSNPPY 128 >gi|262831286|sp|Q57L59|TRMN6_SALCH RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName: Full=tRNA m6A37 methyltransferase Length = 263 Score = 42.0 bits (97), Expect = 0.076, Method: Compositional matrix adjust. Identities = 29/85 (34%), Positives = 43/85 (50%), Gaps = 6/85 (7%) Query: 97 DVVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQS 155 DV RILD+GTG+G + L L + + + V++ A A+ N + R T+ + Sbjct: 44 DVKRILDIGTGSGLLALMLAQRTDDNVPIDAVELDAGAAMQAQENVAHSPWPHRI-TVHT 102 Query: 156 D----WFSSVEGLFDVIVSNPPYIE 176 D W FD+I+SNPPY E Sbjct: 103 DDIQRWAPRQTVRFDLIISNPPYYE 127 >gi|255525760|ref|ZP_05392691.1| type I restriction-modification system, M subunit [Clostridium carboxidivorans P7] gi|255510583|gb|EET86892.1| type I restriction-modification system, M subunit [Clostridium carboxidivorans P7] Length = 412 Score = 42.0 bits (97), Expect = 0.076, Method: Compositional matrix adjust. Identities = 43/152 (28%), Positives = 66/152 (43%), Gaps = 24/152 (15%) Query: 93 IEKRD-VVRILDLGTGTGAVCLALLKESPF---FKGVGVDISCKALEIAKSNAVTNGVS- 147 +EK D + D G+G++ L + +E P K G +++ +A+ N + + VS Sbjct: 104 VEKSDEFFNLYDPTMGSGSLLLTVGQELPKGTPMKYFGQELNTTTYNLARMNLMMHDVSY 163 Query: 148 -----ERFDTLQSDWFSSVEGL-------FDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195 DTL+SDW +G FD +V+NPPY D L+ DPR S Sbjct: 164 NNMVLNNADTLESDWPDGPDGKGIDHPRSFDAVVANPPYSAKWDNDETKLK----DPRFS 219 Query: 196 LDGGIDGLSH--YRTIADGVSRHLNKDGLCSV 225 G + S Y I + HLN G ++ Sbjct: 220 DYGKLAPASKADYAFILHSI-YHLNNTGTMAI 250 >gi|254413150|ref|ZP_05026922.1| Methyltransferase domain family [Microcoleus chthonoplastes PCC 7420] gi|196180314|gb|EDX75306.1| Methyltransferase domain family [Microcoleus chthonoplastes PCC 7420] Length = 388 Score = 42.0 bits (97), Expect = 0.076, Method: Compositional matrix adjust. Identities = 28/86 (32%), Positives = 43/86 (50%), Gaps = 1/86 (1%) Query: 84 SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143 +A +F + R +RILD G GTG L+ +P VG+D+S AL++A+ Sbjct: 33 AAYSFCTGQKPSRQDIRILDAGCGTGVGTEYLVHLNPQAAVVGIDLSAGALQVAQERCHR 92 Query: 144 NGVSE-RFDTLQSDWFSSVEGLFDVI 168 +G + F L +EG FD+I Sbjct: 93 SGANRVEFHHLSLYDAQELEGEFDLI 118 >gi|229917426|ref|YP_002886072.1| methyltransferase small [Exiguobacterium sp. AT1b] gi|229468855|gb|ACQ70627.1| methyltransferase small [Exiguobacterium sp. AT1b] Length = 245 Score = 42.0 bits (97), Expect = 0.076, Method: Compositional matrix adjust. Identities = 35/113 (30%), Positives = 54/113 (47%), Gaps = 16/113 (14%) Query: 75 RPETELLVDSALAFSLPRIEKRDVV-------RILDLGTGTGAVCLALLKESPFFKGV-- 125 RP + D +FSL + + V +++DL GTGA+ L L S KG Sbjct: 16 RPGKIIQSDDVFSFSLDAVLLAEFVWVPIQKGQLVDLCAGTGAIPLFL---SYRTKGTIT 72 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPY 174 GV+I K +++A + N + ER ++ D ++ L +DVI NPPY Sbjct: 73 GVEIQSKLVDMANRSMAVNHLEERIRVVKGDVKTAAAQLGHARYDVITCNPPY 125 >gi|295399245|ref|ZP_06809227.1| Methyltransferase type 12 [Geobacillus thermoglucosidasius C56-YS93] gi|294978711|gb|EFG54307.1| Methyltransferase type 12 [Geobacillus thermoglucosidasius C56-YS93] Length = 247 Score = 42.0 bits (97), Expect = 0.077, Method: Compositional matrix adjust. Identities = 31/92 (33%), Positives = 47/92 (51%), Gaps = 9/92 (9%) Query: 74 PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133 P + +L V L + ++ RILD+G GTG + + L KE F GVD+S Sbjct: 18 PYEQWQLFVQK----KLKQYGRKGAKRILDIGCGTGELAIRLAKEG--FLVTGVDLSENM 71 Query: 134 LEIAKSNAVTNGVSERF---DTLQSDWFSSVE 162 L IA++ A T V+ F + + + FSSV+ Sbjct: 72 LAIAQAKAETQHVAIEFFQQNMTEIEGFSSVD 103 >gi|256027339|ref|ZP_05441173.1| ribosomal RNA small subunit methyltransferase C [Fusobacterium sp. D11] gi|289765308|ref|ZP_06524686.1| 16S rRNA m(2)G 1207 methyltransferase [Fusobacterium sp. D11] gi|289716863|gb|EFD80875.1| 16S rRNA m(2)G 1207 methyltransferase [Fusobacterium sp. D11] Length = 213 Score = 42.0 bits (97), Expect = 0.077, Method: Compositional matrix adjust. Identities = 30/99 (30%), Positives = 55/99 (55%), Gaps = 8/99 (8%) Query: 83 DSALAFSL--PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG-VGVDISCKALEIAKS 139 D+ L F L + K+++ ++LD+GTG G + + LL ++ F VG+DI + ++ A Sbjct: 29 DTILLFKLFQASLNKKNI-KLLDIGTGNGILPI-LLSDNEFLSELVGIDIQKENIDRANE 86 Query: 140 NAVTNGVSE--RFDTLQSDWFSSVEGLFDVIVSNPPYIE 176 N + + +F+ + + FDVI+SNPPY++ Sbjct: 87 ALQLNKIEKNIQFECIDIREYRK-SNYFDVIISNPPYMD 124 >gi|167647339|ref|YP_001685002.1| methyltransferase small [Caulobacter sp. K31] gi|167349769|gb|ABZ72504.1| methyltransferase small [Caulobacter sp. K31] Length = 245 Score = 42.0 bits (97), Expect = 0.077, Method: Compositional matrix adjust. Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 4/81 (4%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+++ G G G LA + VG++ A ++A+ N NG+++R + + D Sbjct: 42 RVIEAGCGVGGALLAAASRRKGARFVGLERDPAAADLARGNIALNGLADRVEVVTGDIER 101 Query: 160 SVEGL----FDVIVSNPPYIE 176 L FD ++SNPP+ + Sbjct: 102 GFRALDLPVFDAVISNPPFFD 122 >gi|321225997|gb|EFX51050.1| putative O-methyltransferase [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] Length = 268 Score = 42.0 bits (97), Expect = 0.078, Method: Compositional matrix adjust. Identities = 29/85 (34%), Positives = 43/85 (50%), Gaps = 6/85 (7%) Query: 97 DVVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQS 155 DV RILD+GTG+G + L L + + + V++ A A+ N + R T+ + Sbjct: 67 DVKRILDIGTGSGLLALMLAQRTDDNVPIDAVELDAGAAMQAQENVAHSPWPHRI-TVHT 125 Query: 156 D----WFSSVEGLFDVIVSNPPYIE 176 D W FD+I+SNPPY E Sbjct: 126 DDIQRWAPRQTVRFDLIISNPPYYE 150 >gi|75676552|ref|YP_318973.1| ribosomal L11 methyltransferase [Nitrobacter winogradskyi Nb-255] gi|74421422|gb|ABA05621.1| [LSU ribosomal protein L11P]-lysine N-methyltransferase [Nitrobacter winogradskyi Nb-255] Length = 321 Score = 42.0 bits (97), Expect = 0.078, Method: Compositional matrix adjust. Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 14/97 (14%) Query: 80 LLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAK 138 LL+D L +PR R+LDLG GTG + +A K + V DI ++ +A+ Sbjct: 169 LLLDHVLRARMPR-------RVLDLGAGTGVLAIAAAKA--LHRSVLASDIDPRSATVAR 219 Query: 139 SNAVTNGVSERFDTLQSDWFSS----VEGLFDVIVSN 171 NA NGV ++++ FS+ FD++++N Sbjct: 220 ENATLNGVGSLVWSIRATGFSAPLFRARAPFDLVLAN 256 >gi|326693027|ref|ZP_08230032.1| RNA methyltransferase [Leuconostoc argentinum KCTC 3773] Length = 254 Score = 42.0 bits (97), Expect = 0.078, Method: Compositional matrix adjust. Identities = 36/123 (29%), Positives = 59/123 (47%), Gaps = 23/123 (18%) Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 N+R+ + D F +D+ L ++ + +DLG GTGAV L +P Sbjct: 19 NIRIIQNPDMFA------YSLDAILLAYFAGVKGKGSGLTVDLGAGTGAVGLFY---APK 69 Query: 122 FKG--VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVI--------VSN 171 G V+I + E+A+ + V NG+ +R +Q+D ++ +FDVI +SN Sbjct: 70 VTGPITLVEIQPELAEMAQRSVVLNGLQDRVSVVQAD----MKAIFDVIQPGSAETVLSN 125 Query: 172 PPY 174 PPY Sbjct: 126 PPY 128 >gi|301325561|ref|ZP_07219029.1| methyltransferase small domain protein [Escherichia coli MS 78-1] gi|300847612|gb|EFK75372.1| methyltransferase small domain protein [Escherichia coli MS 78-1] Length = 378 Score = 42.0 bits (97), Expect = 0.079, Method: Compositional matrix adjust. Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 3/77 (3%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS--ERFDTLQSDWF 158 I+DLG G G + L LL+++P K V VD S A+ ++ N TN +R + + ++ Sbjct: 232 IVDLGCGNGVIGLTLLEKNPQAKVVFVDESPMAVASSRMNVETNMPEALDRCEFMINNAL 291 Query: 159 SSVEGL-FDVIVSNPPY 174 S VE F+ ++ NPP+ Sbjct: 292 SGVEPFRFNAVLCNPPF 308 >gi|229530467|ref|ZP_04419855.1| predicted O-methyltransferase [Vibrio cholerae 12129(1)] gi|229332240|gb|EEN97728.1| predicted O-methyltransferase [Vibrio cholerae 12129(1)] gi|327483460|gb|AEA77867.1| Predicted O-methyltransferase [Vibrio cholerae LMA3894-4] Length = 240 Score = 42.0 bits (97), Expect = 0.079, Method: Compositional matrix adjust. Identities = 26/80 (32%), Positives = 36/80 (45%), Gaps = 5/80 (6%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD---W 157 ILD+G GTG + L + P +DI A A+ N + +ER + +D W Sbjct: 46 ILDIGCGTGLLSLMCAQRFPHAHITALDIEQTAYLAAEHNRQQSPWAERIECQHTDILHW 105 Query: 158 FSSVEGLFDVIVSNPPYIES 177 S F I+ NPPY S Sbjct: 106 LPSKR--FAAIICNPPYFNS 123 >gi|227327928|ref|ZP_03831952.1| ribosomal protein L11 methyltransferase [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 295 Score = 42.0 bits (97), Expect = 0.079, Method: Compositional matrix adjust. Identities = 40/120 (33%), Positives = 60/120 (50%), Gaps = 18/120 (15%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159 I+D G G+G + +A LK + +G+DI +A++ ++ NA NGVSER + L D + Sbjct: 162 IIDFGCGSGILAIAALKLG-ATRAIGIDIDPQAIQASRDNAQRNGVSERLELYLPKDQPA 220 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS---LDGGIDGLSH-YRTIADGVSR 215 + DV+V+N L +R+ P IS G GLS T ADGV+ Sbjct: 221 DLSA--DVVVAN----------ILAGPLRELAPLISDLPKASGHLGLSGVLATQADGVAE 268 >gi|167553273|ref|ZP_02347023.1| putative ribosomal RNA small subunit methyltransferase D [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205322239|gb|EDZ10078.1| putative ribosomal RNA small subunit methyltransferase D [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] Length = 378 Score = 42.0 bits (97), Expect = 0.079, Method: Compositional matrix adjust. Identities = 29/92 (31%), Positives = 50/92 (54%), Gaps = 4/92 (4%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN--GVSERFDTLQSDW 157 +I+DLG G G + L+LL ++P V VD S A++ ++ N TN ER + + ++ Sbjct: 231 KIVDLGCGNGVIGLSLLAKNPQANVVFVDESPMAVDSSRLNVETNLPEAFERCEFMINNA 290 Query: 158 FSSVEGL-FDVIVSNPPYIES-VIVDCLGLEV 187 S VE F+ + NPP+ + + D + E+ Sbjct: 291 LSGVEPFRFNAVFCNPPFHQKHALTDNIAWEM 322 >gi|161612639|ref|YP_001586604.1| hypothetical protein SPAB_00334 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|161362003|gb|ABX65771.1| hypothetical protein SPAB_00334 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] Length = 268 Score = 42.0 bits (97), Expect = 0.079, Method: Compositional matrix adjust. Identities = 29/85 (34%), Positives = 43/85 (50%), Gaps = 6/85 (7%) Query: 97 DVVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQS 155 DV RILD+GTG+G + L L + + + V++ A A+ N + R T+ + Sbjct: 67 DVKRILDIGTGSGLLALMLAQRTDDNVPIDAVELDAGAAMQAQENVAHSPWPHRI-TVHT 125 Query: 156 D----WFSSVEGLFDVIVSNPPYIE 176 D W FD+I+SNPPY E Sbjct: 126 DDIQRWAPRQTVRFDLIISNPPYYE 150 >gi|189346615|ref|YP_001943144.1| hypothetical protein Clim_1096 [Chlorobium limicola DSM 245] gi|189340762|gb|ACD90165.1| Protein of unknown function methylase putative [Chlorobium limicola DSM 245] Length = 393 Score = 42.0 bits (97), Expect = 0.079, Method: Compositional matrix adjust. Identities = 36/110 (32%), Positives = 51/110 (46%), Gaps = 15/110 (13%) Query: 77 ETELLVDSALAFSLPRIEKRDVVR-------ILDLGTGTGAVCLALLKESPFFKGVGVDI 129 E +L F L + E R ++R +LD+ T G L L+ + VDI Sbjct: 191 EVDLYEGQKTGFFLDQRENRKIIRSFSEGADVLDVFTNDGGFALNALRGGAR-SAIMVDI 249 Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFS------SVEGLFDVIVSNPP 173 S + L+ A+ NAV NG E F + SD F + LFDV+V +PP Sbjct: 250 SEETLKRAEKNAVLNGF-ENFSLVASDAFDMLGKMVEAKELFDVVVLDPP 298 >gi|239944962|ref|ZP_04696899.1| hypothetical protein SrosN15_28500 [Streptomyces roseosporus NRRL 15998] gi|239991426|ref|ZP_04712090.1| hypothetical protein SrosN1_29252 [Streptomyces roseosporus NRRL 11379] gi|291448423|ref|ZP_06587813.1| conserved hypothetical protein [Streptomyces roseosporus NRRL 15998] gi|291351370|gb|EFE78274.1| conserved hypothetical protein [Streptomyces roseosporus NRRL 15998] Length = 502 Score = 42.0 bits (97), Expect = 0.080, Method: Compositional matrix adjust. Identities = 23/50 (46%), Positives = 31/50 (62%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 R+LDLG G G + ALLK+ F + VGVD+S +AL IA + + ER Sbjct: 301 RVLDLGCGQGQLVQALLKDVRFTEIVGVDVSMRALTIASRRLKLDRMGER 350 >gi|52424258|ref|YP_087395.1| SmtA protein [Mannheimia succiniciproducens MBEL55E] gi|81825597|sp|Q65W50|TRMN6_MANSM RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName: Full=tRNA m6A37 methyltransferase gi|52306310|gb|AAU36810.1| SmtA protein [Mannheimia succiniciproducens MBEL55E] Length = 242 Score = 42.0 bits (97), Expect = 0.080, Method: Compositional matrix adjust. Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 5/87 (5%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQS--- 155 R LDLGTG+G + L L + + + GV+I A A N + +++ Q Sbjct: 47 RYLDLGTGSGLIALMLAQRTQTDCHITGVEIDPSAYRQATENVRQSPWADKIQLEQQNIV 106 Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDC 182 D+ + FD ++SNPPY E VDC Sbjct: 107 DFTRTCTKKFDTVLSNPPYFEQG-VDC 132 >gi|322834136|ref|YP_004214163.1| methyltransferase small [Rahnella sp. Y9602] gi|321169337|gb|ADW75036.1| methyltransferase small [Rahnella sp. Y9602] Length = 248 Score = 42.0 bits (97), Expect = 0.080, Method: Compositional matrix adjust. Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 4/85 (4%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD-- 156 R+LD+G G+G + + L + S + V++ A A+ N + + ++R D Sbjct: 50 RVLDIGCGSGLIAMMLAQRSNAQTVIDAVELEPSAAAQAEENFLNSVWAQRLAVYAQDIN 109 Query: 157 -WFSSVEGLFDVIVSNPPYIESVIV 180 + + +D+IVSNPPY ES + Sbjct: 110 AYAGEHQAEYDLIVSNPPYFESAVA 134 >gi|262831180|sp|Q7MNQ4|TRMN6_VIBVY RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName: Full=tRNA m6A37 methyltransferase Length = 239 Score = 42.0 bits (97), Expect = 0.080, Method: Compositional matrix adjust. Identities = 25/78 (32%), Positives = 34/78 (43%), Gaps = 1/78 (1%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS- 159 +LD+GTGTG + L + VDI A+E A+ N + R D Sbjct: 46 LLDIGTGTGLLSLMCAQRYAHLSITAVDIDAHAMEAAQENFSHSPWHSRLHLQHGDVLKL 105 Query: 160 SVEGLFDVIVSNPPYIES 177 + FD I+ NPPY S Sbjct: 106 NFTHRFDGIICNPPYFNS 123 >gi|239606703|gb|EEQ83690.1| S-adenosylmethionine-dependent methyltransferase [Ajellomyces dermatitidis ER-3] Length = 373 Score = 42.0 bits (97), Expect = 0.080, Method: Compositional matrix adjust. Identities = 37/123 (30%), Positives = 59/123 (47%), Gaps = 40/123 (32%) Query: 101 ILDLGTGTGAVCLALLKESPFFKG---VGVDISCKALEIAK--------SNAVTNGVSE- 148 ILDLGTG G++ LALL++ F G VGVD S K++E+A+ S++ +G ++ Sbjct: 141 ILDLGTGNGSM-LALLRDEGGFTGGQMVGVDYSPKSIELARRLHHHRHDSSSTRDGGADT 199 Query: 149 ------------RFDTL---------QSDWFSSVEGLFDVIVSNPPY------IESVIVD 181 RF+ + DWF + +G FD+++ + E V+VD Sbjct: 200 AARTTTSGTPAIRFEVWDVFDKRAVEELDWFPAAQGGFDIVLDKGTFDAISLSAEEVVVD 259 Query: 182 CLG 184 G Sbjct: 260 VGG 262 >gi|113953886|ref|YP_731517.1| methyltransferase [Synechococcus sp. CC9311] gi|113881237|gb|ABI46195.1| possible methyltransferase [Synechococcus sp. CC9311] Length = 406 Score = 42.0 bits (97), Expect = 0.080, Method: Compositional matrix adjust. Identities = 34/96 (35%), Positives = 49/96 (51%), Gaps = 8/96 (8%) Query: 83 DSALAFSLPRIEKRD----VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAK 138 DS LA +E RD +RILD G GTG L +P + + VDIS AL++A+ Sbjct: 42 DSVLAVVRGGLESRDSNLGPIRILDAGCGTGVSTDYLCHLNPGAEILAVDISAGALDVAR 101 Query: 139 SNAVTNGVSERFDTLQSDWFSSV----EGLFDVIVS 170 +G +E+ +L+ + S + EG FD I S Sbjct: 102 ERLRRSGGAEQVRSLRQEQRSLLDLDDEGCFDYINS 137 >gi|260434959|ref|ZP_05788929.1| SAM-dependent methyltransferase [Synechococcus sp. WH 8109] gi|260412833|gb|EEX06129.1| SAM-dependent methyltransferase [Synechococcus sp. WH 8109] Length = 389 Score = 42.0 bits (97), Expect = 0.081, Method: Compositional matrix adjust. Identities = 30/80 (37%), Positives = 41/80 (51%), Gaps = 4/80 (5%) Query: 95 KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154 K + RILD G GTG L +P +GVDIS AL +A+ +G +E+ +L+ Sbjct: 56 KMEAPRILDAGCGTGVSTDYLCHLNPGADVLGVDISDGALAVARERCQRSGAAEQVASLR 115 Query: 155 SDWFS----SVEGLFDVIVS 170 + S S EG FD I S Sbjct: 116 QEQRSLLDLSDEGSFDYINS 135 >gi|269122208|ref|YP_003310385.1| methyltransferase small [Sebaldella termitidis ATCC 33386] gi|268616086|gb|ACZ10454.1| methyltransferase small [Sebaldella termitidis ATCC 33386] Length = 201 Score = 42.0 bits (97), Expect = 0.081, Method: Compositional matrix adjust. Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 7/77 (9%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGV---DISCKALEIAKSNAVTNGVSERFDTLQSD 156 + LD+G G G V + F G+ + D++ +ALE+A+ N N ++E ++ ++S Sbjct: 62 KFLDIGCGYGPVGII---AKSFVPGLDISLSDVNERALELAEKNIKLNNITE-YNIIKSY 117 Query: 157 WFSSVEGLFDVIVSNPP 173 F ++ FD I+SNPP Sbjct: 118 IFDNIHENFDCILSNPP 134 >gi|76802473|ref|YP_327481.1| protein methyltransferase [Natronomonas pharaonis DSM 2160] gi|76558338|emb|CAI49928.1| protein methyltransferase [Natronomonas pharaonis DSM 2160] Length = 191 Score = 42.0 bits (97), Expect = 0.081, Method: Compositional matrix adjust. Identities = 51/180 (28%), Positives = 80/180 (44%), Gaps = 28/180 (15%) Query: 72 FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131 +EP ++ LL D+A +E+ D L++G G G V A + + + VG DI+ Sbjct: 13 YEPAEDSRLLADTA-------VERVDGGVALEVGVGFGYVA-AQVASATETRVVGCDINP 64 Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFD 191 +A A+ + S D +D F DV++ NPPY+ + E D Sbjct: 65 EACVRAREAGIETVRSNLTDPFAADSF-------DVVLFNPPYLPT------PPEEEWDD 111 Query: 192 P-RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD-VVRI-----FESRKL 244 P +L GG DG R D + R L G C + + +D VV++ FESR++ Sbjct: 112 PLEHALSGGEDGRRVIRPFLDDLGRVLRPAGRCLLLVSSLTDIDAVVKLAADAGFESREV 171 >gi|302038102|ref|YP_003798424.1| methyltransferase, ubiE family [Candidatus Nitrospira defluvii] gi|300606166|emb|CBK42499.1| Methyltransferase, ubiE family [Candidatus Nitrospira defluvii] Length = 273 Score = 42.0 bits (97), Expect = 0.082, Method: Compositional matrix adjust. Identities = 37/129 (28%), Positives = 62/129 (48%), Gaps = 8/129 (6%) Query: 92 RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151 R++ R+LD+G G+G LALL + GVDI+ +E A++ A GV+ RF Sbjct: 43 RLQIAPGSRLLDVGCGSGQ--LALLAAKDGVEVTGVDIAANWVERAQARARAEGVNARFK 100 Query: 152 TLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIAD 211 ++ FDVIVS + + D + E+ R+ GG G++++ A+ Sbjct: 101 VADAEALPFEAASFDVIVSLIGAMFAPRPDLVAKELL----RVCTPGGTIGMANW--TAE 154 Query: 212 GVSRHLNKD 220 G + K+ Sbjct: 155 GFVGQMFKN 163 >gi|26991803|ref|NP_747228.1| hypothetical protein PP_5127 [Pseudomonas putida KT2440] gi|24986915|gb|AAN70692.1|AE016712_10 conserved hypothetical protein [Pseudomonas putida KT2440] Length = 398 Score = 42.0 bits (97), Expect = 0.082, Method: Compositional matrix adjust. Identities = 34/113 (30%), Positives = 55/113 (48%), Gaps = 30/113 (26%) Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPP-YIESVI 179 VD S AL+ + NA NG+SE+ ++ D F ++ L FDVI+++PP +I+ Sbjct: 249 VDASGFALDGVERNAALNGISEKLTCIEGDVFEALRELKAAEERFDVIIADPPAFIK--- 305 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL-----CSVEI 227 R D + +G + YR + + R LNKDG+ CS+ + Sbjct: 306 --------RKKDLK-------NGEAAYRRLNEQAMRMLNKDGILVSASCSMHL 343 >gi|161936282|ref|YP_131495.2| ribosomal protein L11 methyltransferase [Photobacterium profundum SS9] gi|60390454|sp|Q6LLY5|PRMA_PHOPR RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11 Mtase Length = 294 Score = 42.0 bits (97), Expect = 0.082, Method: Compositional matrix adjust. Identities = 36/112 (32%), Positives = 59/112 (52%), Gaps = 17/112 (15%) Query: 74 PRPET-ELLVDSALAFS----------LPRIEKRDVV--RILDLGTGTGAVCLALLKESP 120 P P +L+D LAF L ++ +D+V I+D G G+G + +A LK Sbjct: 123 PEPNAVNVLLDPGLAFGTGTHPTTSLCLEWLDGQDLVGKTIIDFGCGSGILAIAALKLG- 181 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFSSVEGLFDVIVSN 171 K +G+DI +A++ ++ NA NGVS++ L D + V+ DV+V+N Sbjct: 182 AEKVIGIDIDPQAIQASRDNAERNGVSDKLALFLPQDQPTDVQA--DVVVAN 231 >gi|315179302|gb|ADT86216.1| hypothetical ribosomal RNA small subunit methyltransferase D (rRNA (guanine-N(2)-)-methyltransferase) [Vibrio furnissii NCTC 11218] Length = 377 Score = 42.0 bits (97), Expect = 0.082, Method: Compositional matrix adjust. Identities = 30/110 (27%), Positives = 53/110 (48%), Gaps = 4/110 (3%) Query: 82 VDSALAFSLPRIEKRDVV-RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140 +D F LP + + ++DLG G G + + + + +P VD S A+E A+ N Sbjct: 214 LDQGTRFLLPHLPSDSTLNHVIDLGCGNGVLSVRMGQLNPQVNITCVDESFMAVESARQN 273 Query: 141 AVTNGVSER-FDTLQSDWFSSVEGLF-DVIVSNPPY-IESVIVDCLGLEV 187 VTN ER + + ++ E D++V NPP+ + I D + ++ Sbjct: 274 LVTNLGQERNIECIANNCLDGFEAAHTDMVVCNPPFHQQQAITDHIAWQM 323 >gi|153802010|ref|ZP_01956596.1| conserved hypothetical protein [Vibrio cholerae MZO-3] gi|124122469|gb|EAY41212.1| conserved hypothetical protein [Vibrio cholerae MZO-3] Length = 240 Score = 42.0 bits (97), Expect = 0.082, Method: Compositional matrix adjust. Identities = 26/80 (32%), Positives = 36/80 (45%), Gaps = 5/80 (6%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD---W 157 ILD+G GTG + L + P +DI A A+ N + +ER + +D W Sbjct: 46 ILDIGCGTGLLSLMCAQRFPHAHITALDIEQTAYLAAEHNRQQSPWAERIECQHADILHW 105 Query: 158 FSSVEGLFDVIVSNPPYIES 177 S F I+ NPPY S Sbjct: 106 LPSKR--FAAIICNPPYFNS 123 >gi|104779566|ref|YP_606064.1| hypothetical protein PSEEN0284 [Pseudomonas entomophila L48] gi|95108553|emb|CAK13247.1| conserved hypothetical protein [Pseudomonas entomophila L48] Length = 398 Score = 42.0 bits (97), Expect = 0.082, Method: Compositional matrix adjust. Identities = 34/113 (30%), Positives = 55/113 (48%), Gaps = 30/113 (26%) Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPP-YIESVI 179 VD S AL+ + NA NG+SE+ ++ D F ++ L FDVI+++PP +I+ Sbjct: 249 VDASGFALDGVERNAALNGISEKLTCIEGDVFEALRELKAAEERFDVIIADPPAFIK--- 305 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL-----CSVEI 227 R D + +G + YR + + R LNKDG+ CS+ + Sbjct: 306 --------RKKDLK-------NGEAAYRRLNEQAMRMLNKDGILVSASCSMHL 343 >gi|320157376|ref|YP_004189755.1| putative O-methyltransferase [Vibrio vulnificus MO6-24/O] gi|319932687|gb|ADV87551.1| predicted O-methyltransferase [Vibrio vulnificus MO6-24/O] Length = 239 Score = 42.0 bits (97), Expect = 0.083, Method: Compositional matrix adjust. Identities = 25/78 (32%), Positives = 34/78 (43%), Gaps = 1/78 (1%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS- 159 +LD+GTGTG + L + VDI A+E A+ N + R D Sbjct: 46 LLDIGTGTGLLSLMCAQRYAHLSITAVDIDAHAMEAAQENFSHSPWHSRLHLQHGDVLKL 105 Query: 160 SVEGLFDVIVSNPPYIES 177 + FD I+ NPPY S Sbjct: 106 NFTHRFDGIICNPPYFNS 123 >gi|54307732|ref|YP_128752.1| hypothetical protein PBPRA0527 [Photobacterium profundum SS9] gi|81828856|sp|Q6LUS5|RSMC_PHOPR RecName: Full=Ribosomal RNA small subunit methyltransferase C; AltName: Full=16S rRNA m2G1207 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rsmC gi|46912155|emb|CAG18950.1| hypothetical 16S RNA G1207 methylase RsmC [Photobacterium profundum SS9] Length = 339 Score = 42.0 bits (97), Expect = 0.083, Method: Compositional matrix adjust. Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 2/75 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LD G G G + + + P + DIS A+E AK N + +F +D +S Sbjct: 202 KVLDFGCGAGVLGAIMKAKHPRIELELCDISALAIESAKETFKVNQLDAKFTA--TDVYS 259 Query: 160 SVEGLFDVIVSNPPY 174 ++G ++ ++SNPP+ Sbjct: 260 ELKGPYNYLISNPPF 274 >gi|302391393|ref|YP_003827213.1| ribosomal protein L11 methyltransferase [Acetohalobium arabaticum DSM 5501] gi|302203470|gb|ADL12148.1| ribosomal protein L11 methyltransferase [Acetohalobium arabaticum DSM 5501] Length = 290 Score = 42.0 bits (97), Expect = 0.084, Method: Compositional matrix adjust. Identities = 31/117 (26%), Positives = 56/117 (47%), Gaps = 22/117 (18%) Query: 72 FEPRPETELL-VDSALAFS----------LPRIEK--RDVVRILDLGTGTGAVCLALLKE 118 ++P+PE +++ +D +AF L IE+ +LD+GTGTG + + Sbjct: 115 YQPKPEEKVIEIDPGMAFGTGSHVTTTMCLEAIEEYSSQYSDLLDIGTGTGILSIG---- 170 Query: 119 SPFFKGV----GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSN 171 + G+ +DI A+ IAK N NG+S+ Q + V+ + ++V+N Sbjct: 171 -AYLLGIEDITAIDIDETAVRIAKENLKLNGISQGVKVEQGNLAEEVDNSYGLVVAN 226 >gi|161507538|ref|YP_001577492.1| Type I restriction-modification system modification subunit [Lactobacillus helveticus DPC 4571] gi|160348527|gb|ABX27201.1| Type I restriction-modification system modification subunit [Lactobacillus helveticus DPC 4571] Length = 551 Score = 42.0 bits (97), Expect = 0.084, Method: Compositional matrix adjust. Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 13/89 (14%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKG-------VGVDISCKALEIAKSNAVTNGVSE--- 148 + + D G+G++ L K G G +I+ +A+ N + +GV Sbjct: 233 MTVYDPAMGSGSLLLKFKKYIKLANGQADKIFYYGQEINMSTYNLARMNMILHGVDSSNQ 292 Query: 149 ---RFDTLQSDWFSSVEGLFDVIVSNPPY 174 R DTL DW + +FD +V NPPY Sbjct: 293 ELRRGDTLDEDWPPVSKTMFDAVVMNPPY 321 >gi|78224576|ref|YP_386323.1| 50S ribosomal protein L11P methyltransferase [Geobacter metallireducens GS-15] gi|123570746|sp|Q39Q76|PRMA_GEOMG RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11 Mtase gi|78195831|gb|ABB33598.1| [LSU ribosomal protein L11P]-lysine N-methyltransferase [Geobacter metallireducens GS-15] Length = 299 Score = 42.0 bits (97), Expect = 0.084, Method: Compositional matrix adjust. Identities = 43/148 (29%), Positives = 66/148 (44%), Gaps = 25/148 (16%) Query: 43 VRSLKHESIHRILGWRDFYNV----RLTLSSDTFEP-RPETELLV---DSALAFS----- 89 V +L+ E GWR + R + T+EP PE LV D +AF Sbjct: 93 VTTLREEDWAT--GWRQHFAPTRIGRKLVIKPTWEPFSPEPGDLVIELDPGMAFGTGTHP 150 Query: 90 -----LPRIEKRDVVR-ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143 L +EK +LD+GTG+G + +A +K + VG DI A+ +A+ N Sbjct: 151 TTRLCLEALEKLGTAGDVLDVGTGSGILAMAAVKLG-AQRVVGTDIDPDAVAVARENCAM 209 Query: 144 NGVSERFDTLQSDWFSSVEGLFDVIVSN 171 NGV+ T + + G F V+++N Sbjct: 210 NGVTAELVTTP---LADIPGQFSVVLAN 234 >gi|312115779|ref|YP_004013375.1| ribosomal L11 methyltransferase [Rhodomicrobium vannielii ATCC 17100] gi|311220908|gb|ADP72276.1| ribosomal L11 methyltransferase [Rhodomicrobium vannielii ATCC 17100] Length = 291 Score = 42.0 bits (97), Expect = 0.085, Method: Compositional matrix adjust. Identities = 29/91 (31%), Positives = 42/91 (46%), Gaps = 9/91 (9%) Query: 88 FSLPRIEKRDVVRILDLGTGTGAVCLALLK---ESPFFKGVGVDISCKALEIAKSNAVTN 144 +L R+ V R+LDLGTG+G + + K P V VD+ A+E+A+ N N Sbjct: 138 LALERLSPVGVDRVLDLGTGSGVLAIGAAKALGHGPHI--VAVDVDPIAVEVARENVRMN 195 Query: 145 GVSERFDTLQSDWFSSVEGL----FDVIVSN 171 G D + + FDVIV+N Sbjct: 196 GAGADIALFTGDGYKPRDAYALAPFDVIVAN 226 >gi|254510350|ref|ZP_05122417.1| SAM-dependent methyltransferase [Rhodobacteraceae bacterium KLH11] gi|221534061|gb|EEE37049.1| SAM-dependent methyltransferase [Rhodobacteraceae bacterium KLH11] Length = 400 Score = 42.0 bits (97), Expect = 0.085, Method: Compositional matrix adjust. Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 7/81 (8%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 R+LD+ + G LA+L + + VD S ALE+A A +G ++RF T Q D F Sbjct: 228 ARVLDVFSHVGGFGLAMLAGG-AAQALAVDGSAAALELATKGAAASGYADRFQTRQGDAF 286 Query: 159 SSVEGL------FDVIVSNPP 173 + L FDV++ +PP Sbjct: 287 DMLTQLGQEAATFDVVICDPP 307 >gi|253756219|ref|YP_003029359.1| type I restriction-modification system M protein [Streptococcus suis BM407] gi|251818683|emb|CAZ56518.1| type I restriction-modification system M protein [Streptococcus suis BM407] Length = 529 Score = 42.0 bits (97), Expect = 0.085, Method: Compositional matrix adjust. Identities = 29/99 (29%), Positives = 46/99 (46%), Gaps = 17/99 (17%) Query: 93 IEKRDV-VRILDLGTGTGAVCLALLKESP---FFKGVGVDISCKALEIAKSN------AV 142 +EK D + D G+G++ L + E P K G +++ +A+ N Sbjct: 221 LEKSDTSFSVYDPTMGSGSLLLTVRNELPQGQHIKFYGQEMNTTTYNLARMNLMMHQVGY 280 Query: 143 TNGVSERFDTLQSDWFSSVEGL-------FDVIVSNPPY 174 +N + DTL+SDW V+ L FD +V+NPPY Sbjct: 281 SNMILNNADTLESDWPDGVDELGIDQPRSFDAVVANPPY 319 >gi|153009089|ref|YP_001370304.1| ribosomal protein L11 methyltransferase [Ochrobactrum anthropi ATCC 49188] gi|151560977|gb|ABS14475.1| ribosomal L11 methyltransferase [Ochrobactrum anthropi ATCC 49188] Length = 298 Score = 42.0 bits (97), Expect = 0.085, Method: Compositional matrix adjust. Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 5/74 (6%) Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS- 160 LDLGTG+ + +A+ K +P + DI A+ +A NA NGV+E T ++ F Sbjct: 164 LDLGTGSAVLAIAIAKLAP-IPVLATDIDPVAVTVAAENAAKNGVAEHIVTATAEGFGHP 222 Query: 161 ---VEGLFDVIVSN 171 FD+IV+N Sbjct: 223 IFRSYSPFDLIVAN 236 >gi|37678845|ref|NP_933454.1| O-methyltransferase [Vibrio vulnificus YJ016] gi|37197586|dbj|BAC93425.1| predicted O-methyltransferase [Vibrio vulnificus YJ016] Length = 253 Score = 42.0 bits (97), Expect = 0.085, Method: Compositional matrix adjust. Identities = 25/78 (32%), Positives = 34/78 (43%), Gaps = 1/78 (1%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS- 159 +LD+GTGTG + L + VDI A+E A+ N + R D Sbjct: 60 LLDIGTGTGLLSLMCAQRYAHLSITAVDIDAHAMEAAQENFSHSPWHSRLHLQHGDVLKL 119 Query: 160 SVEGLFDVIVSNPPYIES 177 + FD I+ NPPY S Sbjct: 120 NFTHRFDGIICNPPYFNS 137 >gi|239943101|ref|ZP_04695038.1| putative methyltransferase [Streptomyces roseosporus NRRL 15998] gi|239989559|ref|ZP_04710223.1| putative methyltransferase [Streptomyces roseosporus NRRL 11379] gi|291446578|ref|ZP_06585968.1| rRNA or tRNA methyltransferase [Streptomyces roseosporus NRRL 15998] gi|291349525|gb|EFE76429.1| rRNA or tRNA methyltransferase [Streptomyces roseosporus NRRL 15998] Length = 511 Score = 42.0 bits (97), Expect = 0.086, Method: Compositional matrix adjust. Identities = 39/128 (30%), Positives = 55/128 (42%), Gaps = 15/128 (11%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 V LDLGTG+G L + + + D++ +ALE + +G + D + Sbjct: 162 VASALDLGTGSGIQALHAAQHA--TRVTATDLNPRALEFTRLTLALSGAAP-ADLREGSL 218 Query: 158 FSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216 F V FD+IVSNPP+ VI L R DGG+ G RT+ H Sbjct: 219 FEPVGSDTFDLIVSNPPF---VISPGARLTYR--------DGGMGGDDLCRTLVQQAGDH 267 Query: 217 LNKDGLCS 224 LN+ G Sbjct: 268 LNEGGYAQ 275 >gi|281420039|ref|ZP_06251038.1| ribosomal protein L11 methyltransferase [Prevotella copri DSM 18205] gi|281405839|gb|EFB36519.1| ribosomal protein L11 methyltransferase [Prevotella copri DSM 18205] Length = 290 Score = 42.0 bits (97), Expect = 0.086, Method: Compositional matrix adjust. Identities = 37/112 (33%), Positives = 56/112 (50%), Gaps = 17/112 (15%) Query: 75 RPET-ELLVDSALAFSLPRIEKRDVV------------RILDLGTGTGAVCLALLKESPF 121 RP+ E+ +++ LAF E ++ RILD GTGTG + L K Sbjct: 118 RPDMIEIGIEAKLAFGTGNHETTRMIISQLLHMPIRTKRILDCGTGTGILALTCSKLGAK 177 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTL--QSDWFSSVEGLFDVIVSN 171 VG DI ++E AK NAV NGV+ + L S + + G+FD++++N Sbjct: 178 -DVVGYDIDEWSVENAKHNAVLNGVT-NMEVLFGNSQVINHISGVFDLVLAN 227 >gi|212710671|ref|ZP_03318799.1| hypothetical protein PROVALCAL_01737 [Providencia alcalifaciens DSM 30120] gi|212686752|gb|EEB46280.1| hypothetical protein PROVALCAL_01737 [Providencia alcalifaciens DSM 30120] Length = 244 Score = 42.0 bits (97), Expect = 0.086, Method: Compositional matrix adjust. Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 3/82 (3%) Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 LD+G+G+G + L L + + V++ A A N + S+R D + Sbjct: 49 LDIGSGSGLIALMLAQRNTQLHIDAVELDADAASQAHENFNASPWSDRLQVFHQDIITFS 108 Query: 162 EG---LFDVIVSNPPYIESVIV 180 E +D+IVSNPPY E + Sbjct: 109 EQPHRQYDLIVSNPPYFEPAVA 130 >gi|159899504|ref|YP_001545751.1| type 12 methyltransferase [Herpetosiphon aurantiacus ATCC 23779] gi|159892543|gb|ABX05623.1| Methyltransferase type 12 [Herpetosiphon aurantiacus ATCC 23779] Length = 460 Score = 42.0 bits (97), Expect = 0.086, Method: Compositional matrix adjust. Identities = 22/48 (45%), Positives = 29/48 (60%) Query: 92 RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKS 139 R++ RILDLG G G + LLKES F VG+D+S +AL I + Sbjct: 275 RLKASGAQRILDLGCGEGKLLRELLKESQFSAVVGMDLSTRALAILQQ 322 >gi|11387075|sp|P57413|RSMC_BUCAI RecName: Full=Ribosomal RNA small subunit methyltransferase C; AltName: Full=16S rRNA m2G1207 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rsmC Length = 338 Score = 42.0 bits (97), Expect = 0.086, Method: Compositional matrix adjust. Identities = 28/93 (30%), Positives = 48/93 (51%), Gaps = 2/93 (2%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 +DS R ++LD+G GTG + +LL SP VD + AL+ ++ Sbjct: 182 IDSGSKLLASTFSNRITGKVLDIGCGTGFLSASLLYFSPDAILTLVDNNMYALKCSQYTL 241 Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174 +N + + + S+ +S+V FD+I+SNPP+ Sbjct: 242 NSNKFNGK--IVYSNLYSNVFKKFDLIISNPPF 272 >gi|307595611|ref|YP_003901928.1| methyltransferase [Vulcanisaeta distributa DSM 14429] gi|307550812|gb|ADN50877.1| methyltransferase small [Vulcanisaeta distributa DSM 14429] Length = 214 Score = 42.0 bits (97), Expect = 0.087, Method: Compositional matrix adjust. Identities = 30/78 (38%), Positives = 46/78 (58%), Gaps = 7/78 (8%) Query: 100 RILDLGTGTG--AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 R+LDLG GTG A+ AL+ + + VDI +AL IAK +A G++ D + +D Sbjct: 59 RVLDLGCGTGRFAIAAALMGAR---QVICVDIDPEALTIAKESASEYGLNN-VDFVTNDV 114 Query: 158 FS-SVEGLFDVIVSNPPY 174 + ++ G F+VI NPP+ Sbjct: 115 RNMAITGKFNVIFQNPPF 132 >gi|146321640|ref|YP_001201351.1| Type I restriction-modification system methyltransferase subunit [Streptococcus suis 98HAH33] gi|253752459|ref|YP_003025600.1| type I restriction-modification system M protein [Streptococcus suis SC84] gi|253754285|ref|YP_003027426.1| type I restriction-modification system M protein [Streptococcus suis P1/7] gi|145692446|gb|ABP92951.1| Type I restriction-modification system methyltransferase subunit [Streptococcus suis 98HAH33] gi|251816748|emb|CAZ52390.1| type I restriction-modification system M protein [Streptococcus suis SC84] gi|251820531|emb|CAR47286.1| type I restriction-modification system M protein [Streptococcus suis P1/7] gi|292559063|gb|ADE32064.1| Type I restriction-modification system M subunit [Streptococcus suis GZ1] gi|319758863|gb|ADV70805.1| Type I restriction-modification system methyltransferase subunit [Streptococcus suis JS14] Length = 529 Score = 42.0 bits (97), Expect = 0.087, Method: Compositional matrix adjust. Identities = 29/99 (29%), Positives = 46/99 (46%), Gaps = 17/99 (17%) Query: 93 IEKRDV-VRILDLGTGTGAVCLALLKESP---FFKGVGVDISCKALEIAKSN------AV 142 +EK D + D G+G++ L + E P K G +++ +A+ N Sbjct: 221 LEKSDTSFSVYDPTMGSGSLLLTVRNELPQGQHIKFYGQEMNTTTYNLARMNLMMHQVGY 280 Query: 143 TNGVSERFDTLQSDWFSSVEGL-------FDVIVSNPPY 174 +N + DTL+SDW V+ L FD +V+NPPY Sbjct: 281 SNMILNNADTLESDWPDGVDELGIDQPRSFDAVVANPPY 319 >gi|148550203|ref|YP_001270305.1| hypothetical protein Pput_5001 [Pseudomonas putida F1] gi|148514261|gb|ABQ81121.1| SAM-dependent methyltransferase [Pseudomonas putida F1] gi|313501103|gb|ADR62469.1| Hypothetical protein, conserved [Pseudomonas putida BIRD-1] Length = 398 Score = 42.0 bits (97), Expect = 0.087, Method: Compositional matrix adjust. Identities = 34/113 (30%), Positives = 55/113 (48%), Gaps = 30/113 (26%) Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPP-YIESVI 179 VD S AL+ + NA NG+SE+ ++ D F ++ L FDVI+++PP +I+ Sbjct: 249 VDASGFALDGVERNAALNGISEKLTCIEGDVFEALRELKAAEERFDVIIADPPAFIK--- 305 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL-----CSVEI 227 R D + +G + YR + + R LNKDG+ CS+ + Sbjct: 306 --------RKKDLK-------NGEAAYRRLNEQAMRMLNKDGILVSASCSMHL 343 >gi|268323944|emb|CBH37532.1| hypothetical membrane protein, methyltransferase domain family [uncultured archaeon] Length = 257 Score = 42.0 bits (97), Expect = 0.087, Method: Compositional matrix adjust. Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 6/78 (7%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKA----LEIAKSNAVTNGVSER--FDTL 153 + LD+GTG+G + + K+ P K +G+D KA +E+ ++NA T GV +R F Sbjct: 90 KALDIGTGSGGCAIKVAKKFPNSKVMGIDYWGKAWSYSMEVCENNAATEGVGQRTNFQRA 149 Query: 154 QSDWFSSVEGLFDVIVSN 171 + +G FD VSN Sbjct: 150 SAADLPFDDGEFDAAVSN 167 >gi|295402000|ref|ZP_06811962.1| putative RNA methylase [Geobacillus thermoglucosidasius C56-YS93] gi|312109181|ref|YP_003987497.1| methyltransferase small [Geobacillus sp. Y4.1MC1] gi|294976002|gb|EFG51618.1| putative RNA methylase [Geobacillus thermoglucosidasius C56-YS93] gi|311214282|gb|ADP72886.1| methyltransferase small [Geobacillus sp. Y4.1MC1] Length = 249 Score = 42.0 bits (97), Expect = 0.087, Method: Compositional matrix adjust. Identities = 25/82 (30%), Positives = 44/82 (53%), Gaps = 5/82 (6%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 I+DL TG G + L LL K +GV+I + ++AK + NG+ ++ + + D + Sbjct: 49 IVDLCTGNGVIPL-LLSMRTKGKIIGVEIQERLCDMAKRSVKYNGLEKQIEIIHGDIKDA 107 Query: 161 VEGL----FDVIVSNPPYIESV 178 + L +DV+ NPPY ++ Sbjct: 108 PKQLGYSKYDVVTCNPPYFPTI 129 >gi|222034813|emb|CAP77556.1| ribosomal RNA small subunit methyltransferase D [Escherichia coli LF82] gi|312947653|gb|ADR28480.1| putative methyltransferase small domain protein [Escherichia coli O83:H1 str. NRG 857C] Length = 378 Score = 42.0 bits (97), Expect = 0.087, Method: Compositional matrix adjust. Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 3/77 (3%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS--ERFDTLQSDWF 158 I+DLG G G + L LL+++P K V VD S A+ ++ N TN +R + + ++ Sbjct: 232 IVDLGCGNGVIGLTLLEKNPQAKVVFVDESSMAVASSRLNVETNMPEALDRCEFMINNAL 291 Query: 159 SSVEGL-FDVIVSNPPY 174 S VE F+ ++ NPP+ Sbjct: 292 SGVEPFRFNAVLCNPPF 308 >gi|254303277|ref|ZP_04970635.1| rRNA methyltransferase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148323469|gb|EDK88719.1| rRNA methyltransferase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 223 Score = 42.0 bits (97), Expect = 0.087, Method: Compositional matrix adjust. Identities = 26/98 (26%), Positives = 54/98 (55%), Gaps = 6/98 (6%) Query: 83 DSALAFSLPR--IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140 D+ L F L + + K+++ ++LD+GTG G + + L + +G+DI + ++ A Sbjct: 29 DTILLFKLFQDSLNKKNI-KLLDIGTGNGILPILLSDNKFLTELIGIDIQKENIDRANKA 87 Query: 141 AVTNGVSE--RFDTLQSDWFSSVEGLFDVIVSNPPYIE 176 N + + +F+ + + + FD+I+SNPPY++ Sbjct: 88 LELNKIEKNIQFECIDIREYKN-SNYFDIIISNPPYMD 124 >gi|78706836|ref|NP_001027221.1| CG9960 [Drosophila melanogaster] gi|7295917|gb|AAF51216.1| CG9960 [Drosophila melanogaster] gi|17861576|gb|AAL39265.1| GH13185p [Drosophila melanogaster] gi|220944536|gb|ACL84811.1| CG9960-PA [synthetic construct] gi|220954408|gb|ACL89747.1| CG9960-PA [synthetic construct] Length = 224 Score = 42.0 bits (97), Expect = 0.087, Method: Compositional matrix adjust. Identities = 35/122 (28%), Positives = 62/122 (50%), Gaps = 8/122 (6%) Query: 72 FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE-SPFFKGVGVDIS 130 +EP ++ LL+D AL L +++ ++LG+G+G + AL K+ + F + DI+ Sbjct: 18 YEPAEDSFLLLD-ALEKDLEYLDRLQPSLCVELGSGSGVIITALAKKLAGFSLCLATDIN 76 Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRD 189 KA + A NG R D+++ ++ DV++ NPPY V+ L+ + Sbjct: 77 PKACNATRRTATRNGA--RLDSIRCSLADALRPRSVDVLLFNPPY---VVTSDEELQTQQ 131 Query: 190 FD 191 FD Sbjct: 132 FD 133 >gi|147677215|ref|YP_001211430.1| ribosomal protein L11 methyltransferase [Pelotomaculum thermopropionicum SI] gi|189037699|sp|A5D3Y3|PRMA_PELTS RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11 Mtase gi|146273312|dbj|BAF59061.1| ribosomal protein L11 methylase [Pelotomaculum thermopropionicum SI] Length = 308 Score = 42.0 bits (97), Expect = 0.088, Method: Compositional matrix adjust. Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 1/71 (1%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 + D+GTG+G + +A + + V VDI A +A NA NGV+ + +Q + Sbjct: 174 VYDVGTGSGVLAVAAARLG-AGRVVAVDIDPLACRVAAGNAERNGVAGKVQVVQGNLLEK 232 Query: 161 VEGLFDVIVSN 171 VEG D++V+N Sbjct: 233 VEGRADLVVAN 243 >gi|167036166|ref|YP_001671397.1| hypothetical protein PputGB1_5177 [Pseudomonas putida GB-1] gi|166862654|gb|ABZ01062.1| conserved hypothetical protein [Pseudomonas putida GB-1] Length = 398 Score = 42.0 bits (97), Expect = 0.088, Method: Compositional matrix adjust. Identities = 34/113 (30%), Positives = 55/113 (48%), Gaps = 30/113 (26%) Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPP-YIESVI 179 VD S AL+ + NA NG+SE+ ++ D F ++ L FDVI+++PP +I+ Sbjct: 249 VDASGFALDGVERNAALNGISEKLTCIEGDVFEALRELKAAEERFDVIIADPPAFIK--- 305 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL-----CSVEI 227 R D + +G + YR + + R LNKDG+ CS+ + Sbjct: 306 --------RKKDLK-------NGEAAYRRLNEQAMRMLNKDGILVSASCSMHL 343 >gi|67921842|ref|ZP_00515359.1| probable methyltransferase [Crocosphaera watsonii WH 8501] gi|67856434|gb|EAM51676.1| probable methyltransferase [Crocosphaera watsonii WH 8501] Length = 241 Score = 42.0 bits (97), Expect = 0.088, Method: Compositional matrix adjust. Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 5/88 (5%) Query: 76 PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135 P +L++D+ +A +P + RIL+LG GTG + L LLK P + V VD S + +E Sbjct: 28 PYYDLMLDTLVA-CVPS----NSSRILELGCGTGELSLKLLKHCPNAQIVAVDYSPRMIE 82 Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEG 163 ++K ER +Q D+ + G Sbjct: 83 MSKYKLGKTEFLERITFIQGDFGAWANG 110 >gi|326382694|ref|ZP_08204385.1| modification methylase, HemK family protein [Gordonia neofelifaecis NRRL B-59395] gi|326198813|gb|EGD55996.1| modification methylase, HemK family protein [Gordonia neofelifaecis NRRL B-59395] Length = 258 Score = 42.0 bits (97), Expect = 0.090, Method: Compositional matrix adjust. Identities = 51/202 (25%), Positives = 75/202 (37%), Gaps = 10/202 (4%) Query: 31 DDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSL 90 D RQ L VR E + ++G +F + L + F PR + LL +A+ Sbjct: 34 DPRQ---LAAWAVRRAAGEPLEHVVGRVEFAGLDLVVGPGAFVPRQRSALLAATAVDL-- 88 Query: 91 PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150 + R ++ G + + V D AL A N + V R Sbjct: 89 --LAARRSPVFVEAFCGVAPIAAYVADRCRGAYVVATDADPVALAFAAENLSADAVY-RG 145 Query: 151 DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL-DGGIDGLSHYRTI 209 L S + G DVI + PPY+ V+ L E D +PR +L GG DGL + Sbjct: 146 AGL-SGLPEPLRGRVDVIAAVPPYVPESAVELLPHEAVDHEPRAALVGGGDDGLLRAAEL 204 Query: 210 ADGVSRHLNKDGLCSVEIGYNQ 231 L G +E+ Q Sbjct: 205 LQQARSWLLDGGAVVIEMNVAQ 226 >gi|229917367|ref|YP_002886013.1| methyltransferase small [Exiguobacterium sp. AT1b] gi|229468796|gb|ACQ70568.1| methyltransferase small [Exiguobacterium sp. AT1b] Length = 198 Score = 42.0 bits (97), Expect = 0.090, Method: Compositional matrix adjust. Identities = 31/97 (31%), Positives = 55/97 (56%), Gaps = 11/97 (11%) Query: 78 TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137 + LL+++ F +P + R ILD+G G G + ++L S + + +D++ +AL ++ Sbjct: 46 SRLLIET---FEMPDVSGR----ILDVGCGYGPMGISLADASGR-EALLIDVNERALALS 97 Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPP 173 + NA NGV+ +T S + +V G F IV+NPP Sbjct: 98 EQNAARNGVT--VETRLSHAYDAVGGERFAAIVTNPP 132 >gi|318080200|ref|ZP_07987532.1| modification methylase, HemK family protein [Streptomyces sp. SA3_actF] Length = 129 Score = 42.0 bits (97), Expect = 0.090, Method: Compositional matrix adjust. Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 4/74 (5%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101 + R + E + ++G F+ +R+ + F PR +E LV ALA + V + Sbjct: 50 VARRVAGEPLEHVVGHAVFHGLRIAVGPGVFVPRRRSEFLVARALAG----VRAEGAVTL 105 Query: 102 LDLGTGTGAVCLAL 115 LDL G+GA+ LAL Sbjct: 106 LDLCCGSGALGLAL 119 >gi|300866067|ref|ZP_07110797.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506] gi|300335928|emb|CBN55955.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506] Length = 259 Score = 42.0 bits (97), Expect = 0.090, Method: Compositional matrix adjust. Identities = 21/57 (36%), Positives = 34/57 (59%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 RIL+LG GTG + L LL+ P+ + + VD S + L AK+ G ++R+ ++ D Sbjct: 58 RILELGCGTGELSLKLLRCYPYTQIIAVDYSPRMLRFAKAKIEAAGFADRWVGIELD 114 >gi|319763928|ref|YP_004127865.1| methyltransferase small [Alicycliphilus denitrificans BC] gi|317118489|gb|ADV00978.1| methyltransferase small [Alicycliphilus denitrificans BC] Length = 379 Score = 42.0 bits (97), Expect = 0.090, Method: Compositional matrix adjust. Identities = 31/104 (29%), Positives = 52/104 (50%), Gaps = 4/104 (3%) Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162 D+GTGTG V A+L + V +++ +AL A+ N G+ +R + L +D F Sbjct: 205 DIGTGTG-VLAAVLARRGVRRVVATELAPRALACAQDNLRRLGLQDRVELLAADLFPP-- 261 Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206 G ++V NPP++ + + V D R+ L G + GL + Sbjct: 262 GRAPLVVCNPPWLPARPSSAIEQAVYDEGSRM-LKGFLAGLREH 304 >gi|256061475|ref|ZP_05451619.1| ribosomal protein L11 methyltransferase [Brucella neotomae 5K33] gi|261325481|ref|ZP_05964678.1| ribosomal protein L11 methyltransferase [Brucella neotomae 5K33] gi|261301461|gb|EEY04958.1| ribosomal protein L11 methyltransferase [Brucella neotomae 5K33] Length = 285 Score = 42.0 bits (97), Expect = 0.090, Method: Compositional matrix adjust. Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 5/83 (6%) Query: 93 IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152 +E LDLGTG+ + +A+ + +P + DI A+ +A NA NGV+E T Sbjct: 142 VETEHPTNALDLGTGSAVLAIAIARLAP-IPILATDIDPIAVTVAAENAAKNGVAEHIVT 200 Query: 153 LQSDWFSSV----EGLFDVIVSN 171 ++ F FD+IV+N Sbjct: 201 ATAEGFGHPIFRSYSPFDLIVAN 223 >gi|308235827|ref|ZP_07666564.1| methyltransferase small domain protein [Gardnerella vaginalis ATCC 14018] gi|311114409|ref|YP_003985630.1| putative 16S rRNA methyltransferase [Gardnerella vaginalis ATCC 14019] gi|310945903|gb|ADP38607.1| possible 16S rRNA methyltransferase [Gardnerella vaginalis ATCC 14019] Length = 233 Score = 42.0 bits (97), Expect = 0.090, Method: Compositional matrix adjust. Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 9/79 (11%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF-----DTLQ 154 R D+G G GA+ LAL ESP + VD++ +AL++ NA G++ D L+ Sbjct: 90 RFFDIGCGWGAISLALGFESPNAQIYAVDVNERALDLTDINAKNAGLNNIHTYLVEDALK 149 Query: 155 SDWFSSVEGLFDVIVSNPP 173 D + D+I SNPP Sbjct: 150 EDALKDI----DLIWSNPP 164 >gi|212640060|ref|YP_002316580.1| adenine-specific DNA methyltransferase BseCI [Anoxybacillus flavithermus WK1] gi|212561540|gb|ACJ34595.1| Adenine-specific DNA methyltransferase BseCI [Anoxybacillus flavithermus WK1] Length = 577 Score = 42.0 bits (97), Expect = 0.090, Method: Compositional matrix adjust. Identities = 41/150 (27%), Positives = 70/150 (46%), Gaps = 25/150 (16%) Query: 94 EKRDVVRILDLGTGTGAVCLALLKESPFF----KGVGVDISCKALEIAKSNAVTNGVSER 149 E++ V+R+LD G G + LA+ K + + +GVD A+ IA +G + Sbjct: 40 EEKRVIRVLDPACGDGELLLAINKVAQSMNIQLELIGVDSDIDAINIANERLSRSG-HKN 98 Query: 150 FDTLQSDWFSSV-EG----LF--------DVIVSNPPYIESVIVDCLGLE-VRDFDPRIS 195 F + D+ V EG LF D+I++NPPY+ + I LG E + + + Sbjct: 99 FRLINKDFLEMVSEGDNYDLFNTEELEPADIIIANPPYVRTQI---LGAEKAQQLRKKFN 155 Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225 L G +D Y+ +++ L +G+ V Sbjct: 156 LKGRVD---LYQAFLVAMTQQLKSNGIMGV 182 >gi|149926970|ref|ZP_01915228.1| methyltransferase small [Limnobacter sp. MED105] gi|149824191|gb|EDM83411.1| methyltransferase small [Limnobacter sp. MED105] Length = 397 Score = 42.0 bits (97), Expect = 0.090, Method: Compositional matrix adjust. Identities = 26/74 (35%), Positives = 41/74 (55%), Gaps = 3/74 (4%) Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 +D+GTGTG V A+L + V D +ALE A+ N G+ ++ +Q+D F Sbjct: 223 VDVGTGTG-VLAAVLAQRWLSNIVATDNDPRALECAQFNVQNLGMGKQVKVVQADLFPDS 281 Query: 162 EGLFDVIVSNPPYI 175 + D+IV NPP++ Sbjct: 282 KA--DLIVCNPPWL 293 >gi|62290310|ref|YP_222103.1| ribosomal protein L11 methyltransferase [Brucella abortus bv. 1 str. 9-941] gi|82700234|ref|YP_414808.1| ribosomal protein L11 methyltransferase [Brucella melitensis biovar Abortus 2308] gi|189024544|ref|YP_001935312.1| ribosomal protein L11 methyltransferase [Brucella abortus S19] gi|237815817|ref|ZP_04594814.1| ribosomal protein L11 methyltransferase [Brucella abortus str. 2308 A] gi|254697754|ref|ZP_05159582.1| ribosomal protein L11 methyltransferase [Brucella abortus bv. 2 str. 86/8/59] gi|254730643|ref|ZP_05189221.1| ribosomal protein L11 methyltransferase [Brucella abortus bv. 4 str. 292] gi|260546853|ref|ZP_05822592.1| ribosomal protein L11 methyltransferase [Brucella abortus NCTC 8038] gi|260758358|ref|ZP_05870706.1| ribosomal protein L11 methyltransferase [Brucella abortus bv. 4 str. 292] gi|260762184|ref|ZP_05874527.1| ribosomal protein L11 methyltransferase [Brucella abortus bv. 2 str. 86/8/59] gi|81309399|sp|Q57C92|PRMA_BRUAB RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11 Mtase gi|123547003|sp|Q2YPS7|PRMA_BRUA2 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11 Mtase gi|226710055|sp|B2S6P1|PRMA_BRUA1 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11 Mtase gi|62196442|gb|AAX74742.1| ribosomal protein L11 methyltransferase, hypothetical [Brucella abortus bv. 1 str. 9-941] gi|82616335|emb|CAJ11392.1| SAM (and some other nucleotide) binding motif [Brucella melitensis biovar Abortus 2308] gi|189020116|gb|ACD72838.1| SAM (and some other nucleotide) binding motif [Brucella abortus S19] gi|237789115|gb|EEP63326.1| ribosomal protein L11 methyltransferase [Brucella abortus str. 2308 A] gi|260095903|gb|EEW79780.1| ribosomal protein L11 methyltransferase [Brucella abortus NCTC 8038] gi|260668676|gb|EEX55616.1| ribosomal protein L11 methyltransferase [Brucella abortus bv. 4 str. 292] gi|260672616|gb|EEX59437.1| ribosomal protein L11 methyltransferase [Brucella abortus bv. 2 str. 86/8/59] Length = 285 Score = 42.0 bits (97), Expect = 0.090, Method: Compositional matrix adjust. Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 5/83 (6%) Query: 93 IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152 +E LDLGTG+ + +A+ + +P + DI A+ +A NA NGV+E T Sbjct: 142 VETEHPTNALDLGTGSAVLAIAIARLAP-IPILATDIDPIAVTVAAENAAKNGVAEHIVT 200 Query: 153 LQSDWFSSV----EGLFDVIVSN 171 ++ F FD+IV+N Sbjct: 201 ATAEGFGHPIFRSYSPFDLIVAN 223 >gi|238754657|ref|ZP_04616010.1| Ribosomal protein L11 methyltransferase [Yersinia ruckeri ATCC 29473] gi|238707116|gb|EEP99480.1| Ribosomal protein L11 methyltransferase [Yersinia ruckeri ATCC 29473] Length = 317 Score = 42.0 bits (97), Expect = 0.091, Method: Compositional matrix adjust. Identities = 26/72 (36%), Positives = 43/72 (59%), Gaps = 4/72 (5%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159 I+D G G+G + +A LK + +G+DI +A++ ++ NA NGVSER + L D + Sbjct: 186 IIDFGCGSGILAIAALKLG-ASRAIGIDIDPQAIQASRDNAQRNGVSERLELYLSKDQPA 244 Query: 160 SVEGLFDVIVSN 171 + DV+V+N Sbjct: 245 DLSA--DVVVAN 254 >gi|226325840|ref|ZP_03801358.1| hypothetical protein COPCOM_03653 [Coprococcus comes ATCC 27758] gi|225205964|gb|EEG88318.1| hypothetical protein COPCOM_03653 [Coprococcus comes ATCC 27758] Length = 251 Score = 42.0 bits (97), Expect = 0.092, Method: Compositional matrix adjust. Identities = 27/98 (27%), Positives = 52/98 (53%), Gaps = 6/98 (6%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 +D+ L + +++ + V LDLGTGTG + + L ++ G++I ++ ++A + Sbjct: 32 MDAVLLSAFAKVKAGECV--LDLGTGTGILPILLAAKTKGKHFTGLEIQEESADMACRSV 89 Query: 142 VTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYI 175 N + E+ D + D + + G DVI +NPPY+ Sbjct: 90 RHNRLEEQIDIVTGDIKEASQIFGKGSMDVITTNPPYM 127 >gi|46914918|emb|CAG21693.1| putative ribosomal protein L11 methyltransferase [Photobacterium profundum SS9] Length = 317 Score = 42.0 bits (97), Expect = 0.092, Method: Compositional matrix adjust. Identities = 36/112 (32%), Positives = 59/112 (52%), Gaps = 17/112 (15%) Query: 74 PRPET-ELLVDSALAFS----------LPRIEKRDVV--RILDLGTGTGAVCLALLKESP 120 P P +L+D LAF L ++ +D+V I+D G G+G + +A LK Sbjct: 146 PEPNAVNVLLDPGLAFGTGTHPTTSLCLEWLDGQDLVGKTIIDFGCGSGILAIAALKLG- 204 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFSSVEGLFDVIVSN 171 K +G+DI +A++ ++ NA NGVS++ L D + V+ DV+V+N Sbjct: 205 AEKVIGIDIDPQAIQASRDNAERNGVSDKLALFLPQDQPTDVQA--DVVVAN 254 >gi|330823808|ref|YP_004387111.1| methyltransferase small [Alicycliphilus denitrificans K601] gi|329309180|gb|AEB83595.1| methyltransferase small [Alicycliphilus denitrificans K601] Length = 379 Score = 42.0 bits (97), Expect = 0.093, Method: Compositional matrix adjust. Identities = 31/104 (29%), Positives = 52/104 (50%), Gaps = 4/104 (3%) Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162 D+GTGTG V A+L + V +++ +AL A+ N G+ +R + L +D F Sbjct: 205 DIGTGTG-VLAAVLARRGVRRVVATELAPRALACAQDNLRRLGLQDRVELLAADLFPP-- 261 Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206 G ++V NPP++ + + V D R+ L G + GL + Sbjct: 262 GRAPLVVCNPPWLPARPSSAIEQAVYDEGSRM-LKGFLAGLREH 304 >gi|116073695|ref|ZP_01470957.1| hypothetical protein RS9916_34632 [Synechococcus sp. RS9916] gi|116069000|gb|EAU74752.1| hypothetical protein RS9916_34632 [Synechococcus sp. RS9916] Length = 400 Score = 42.0 bits (97), Expect = 0.093, Method: Compositional matrix adjust. Identities = 29/86 (33%), Positives = 42/86 (48%), Gaps = 4/86 (4%) Query: 89 SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148 S P + +RILD G GTG L +P + VDIS AL++A+ +G +E Sbjct: 52 SKPPLSSAPPLRILDAGCGTGVTTDYLCHSNPGADVLAVDISAGALDVARERLRRSGAAE 111 Query: 149 RFDTLQSDWFS----SVEGLFDVIVS 170 +L+ + S + EG FD I S Sbjct: 112 VVSSLRQEQRSLLDLAGEGAFDYINS 137 >gi|17986875|ref|NP_539509.1| ribosomal protein L11 methyltransferase [Brucella melitensis bv. 1 str. 16M] gi|23502288|ref|NP_698415.1| ribosomal protein L11 methyltransferase [Brucella suis 1330] gi|161619365|ref|YP_001593252.1| ribosomal protein L11 methyltransferase [Brucella canis ATCC 23365] gi|225627869|ref|ZP_03785906.1| ribosomal protein L11 methyltransferase [Brucella ceti str. Cudo] gi|225852899|ref|YP_002733132.1| ribosomal protein L11 methyltransferase [Brucella melitensis ATCC 23457] gi|254689612|ref|ZP_05152866.1| ribosomal protein L11 methyltransferase [Brucella abortus bv. 6 str. 870] gi|254694102|ref|ZP_05155930.1| ribosomal protein L11 methyltransferase [Brucella abortus bv. 3 str. Tulya] gi|254702139|ref|ZP_05163967.1| ribosomal protein L11 methyltransferase [Brucella suis bv. 5 str. 513] gi|254704675|ref|ZP_05166503.1| ribosomal protein L11 methyltransferase [Brucella suis bv. 3 str. 686] gi|254710459|ref|ZP_05172270.1| ribosomal protein L11 methyltransferase [Brucella pinnipedialis B2/94] gi|254714452|ref|ZP_05176263.1| ribosomal protein L11 methyltransferase [Brucella ceti M644/93/1] gi|254717350|ref|ZP_05179161.1| ribosomal protein L11 methyltransferase [Brucella ceti M13/05/1] gi|256031953|ref|ZP_05445567.1| ribosomal protein L11 methyltransferase [Brucella pinnipedialis M292/94/1] gi|256045048|ref|ZP_05447949.1| ribosomal protein L11 methyltransferase [Brucella melitensis bv. 1 str. Rev.1] gi|256113971|ref|ZP_05454754.1| ribosomal protein L11 methyltransferase [Brucella melitensis bv. 3 str. Ether] gi|256160152|ref|ZP_05457846.1| ribosomal protein L11 methyltransferase [Brucella ceti M490/95/1] gi|256255358|ref|ZP_05460894.1| ribosomal protein L11 methyltransferase [Brucella ceti B1/94] gi|256257861|ref|ZP_05463397.1| ribosomal protein L11 methyltransferase [Brucella abortus bv. 9 str. C68] gi|256263619|ref|ZP_05466151.1| ribosomal protein L11 methyltransferase [Brucella melitensis bv. 2 str. 63/9] gi|256369833|ref|YP_003107344.1| ribosomal protein L11 methyltransferase [Brucella microti CCM 4915] gi|260169090|ref|ZP_05755901.1| ribosomal protein L11 methyltransferase [Brucella sp. F5/99] gi|260565353|ref|ZP_05835837.1| ribosomal protein L11 methyltransferase [Brucella melitensis bv. 1 str. 16M] gi|260566077|ref|ZP_05836547.1| ribosomal protein L11 methyltransferase [Brucella suis bv. 4 str. 40] gi|260755139|ref|ZP_05867487.1| ribosomal protein L11 methyltransferase [Brucella abortus bv. 6 str. 870] gi|260884151|ref|ZP_05895765.1| ribosomal protein L11 methyltransferase [Brucella abortus bv. 9 str. C68] gi|261214400|ref|ZP_05928681.1| ribosomal protein L11 methyltransferase [Brucella abortus bv. 3 str. Tulya] gi|261219180|ref|ZP_05933461.1| ribosomal protein L11 methyltransferase [Brucella ceti M13/05/1] gi|261222559|ref|ZP_05936840.1| ribosomal protein L11 methyltransferase [Brucella ceti B1/94] gi|261318030|ref|ZP_05957227.1| ribosomal protein L11 methyltransferase [Brucella pinnipedialis B2/94] gi|261322241|ref|ZP_05961438.1| ribosomal protein L11 methyltransferase [Brucella ceti M644/93/1] gi|261752708|ref|ZP_05996417.1| ribosomal protein L11 methyltransferase [Brucella suis bv. 5 str. 513] gi|261755368|ref|ZP_05999077.1| ribosomal protein L11 methyltransferase [Brucella suis bv. 3 str. 686] gi|261758595|ref|ZP_06002304.1| ribosomal protein L11 methyltransferase [Brucella sp. F5/99] gi|265989061|ref|ZP_06101618.1| ribosomal protein L11 methyltransferase [Brucella pinnipedialis M292/94/1] gi|265991474|ref|ZP_06104031.1| ribosomal protein L11 methyltransferase [Brucella melitensis bv. 1 str. Rev.1] gi|265995312|ref|ZP_06107869.1| ribosomal protein L11 methyltransferase [Brucella melitensis bv. 3 str. Ether] gi|265998524|ref|ZP_06111081.1| ribosomal protein L11 methyltransferase [Brucella ceti M490/95/1] gi|297248697|ref|ZP_06932415.1| 50S ribosomal protein L11 methyltransferase [Brucella abortus bv. 5 str. B3196] gi|38605324|sp|Q8FZQ6|PRMA_BRUSU RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11 Mtase gi|38605404|sp|Q8YI53|PRMA_BRUME RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11 Mtase gi|189037691|sp|A9M676|PRMA_BRUC2 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11 Mtase gi|254782832|sp|C0RE56|PRMA_BRUMB RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11 Mtase gi|17982514|gb|AAL51773.1| ribosomal protein l11 methyltransferase [Brucella melitensis bv. 1 str. 16M] gi|23348263|gb|AAN30330.1| ribosomal protein L11 methyltransferase, putative [Brucella suis 1330] gi|161336176|gb|ABX62481.1| Ribosomal protein L11 methyltransferase [Brucella canis ATCC 23365] gi|225617874|gb|EEH14919.1| ribosomal protein L11 methyltransferase [Brucella ceti str. Cudo] gi|225641264|gb|ACO01178.1| ribosomal L11 methyltransferase [Brucella melitensis ATCC 23457] gi|255999996|gb|ACU48395.1| ribosomal protein L11 methyltransferase [Brucella microti CCM 4915] gi|260151421|gb|EEW86515.1| ribosomal protein L11 methyltransferase [Brucella melitensis bv. 1 str. 16M] gi|260155595|gb|EEW90675.1| ribosomal protein L11 methyltransferase [Brucella suis bv. 4 str. 40] gi|260675247|gb|EEX62068.1| ribosomal protein L11 methyltransferase [Brucella abortus bv. 6 str. 870] gi|260873679|gb|EEX80748.1| ribosomal protein L11 methyltransferase [Brucella abortus bv. 9 str. C68] gi|260916007|gb|EEX82868.1| ribosomal protein L11 methyltransferase [Brucella abortus bv. 3 str. Tulya] gi|260921143|gb|EEX87796.1| ribosomal protein L11 methyltransferase [Brucella ceti B1/94] gi|260924269|gb|EEX90837.1| ribosomal protein L11 methyltransferase [Brucella ceti M13/05/1] gi|261294931|gb|EEX98427.1| ribosomal protein L11 methyltransferase [Brucella ceti M644/93/1] gi|261297253|gb|EEY00750.1| ribosomal protein L11 methyltransferase [Brucella pinnipedialis B2/94] gi|261738579|gb|EEY26575.1| ribosomal protein L11 methyltransferase [Brucella sp. F5/99] gi|261742461|gb|EEY30387.1| ribosomal protein L11 methyltransferase [Brucella suis bv. 5 str. 513] gi|261745121|gb|EEY33047.1| ribosomal protein L11 methyltransferase [Brucella suis bv. 3 str. 686] gi|262553148|gb|EEZ08982.1| ribosomal protein L11 methyltransferase [Brucella ceti M490/95/1] gi|262766425|gb|EEZ12214.1| ribosomal protein L11 methyltransferase [Brucella melitensis bv. 3 str. Ether] gi|263002258|gb|EEZ14833.1| ribosomal protein L11 methyltransferase [Brucella melitensis bv. 1 str. Rev.1] gi|263093671|gb|EEZ17676.1| ribosomal protein L11 methyltransferase [Brucella melitensis bv. 2 str. 63/9] gi|264661258|gb|EEZ31519.1| ribosomal protein L11 methyltransferase [Brucella pinnipedialis M292/94/1] gi|297175866|gb|EFH35213.1| 50S ribosomal protein L11 methyltransferase [Brucella abortus bv. 5 str. B3196] gi|326409441|gb|ADZ66506.1| ribosomal protein L11 methyltransferase [Brucella melitensis M28] gi|326539147|gb|ADZ87362.1| ribosomal L11 methyltransferase [Brucella melitensis M5-90] Length = 285 Score = 42.0 bits (97), Expect = 0.093, Method: Compositional matrix adjust. Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 5/83 (6%) Query: 93 IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152 +E LDLGTG+ + +A+ + +P + DI A+ +A NA NGV+E T Sbjct: 142 VETEHPTNALDLGTGSAVLAIAIARLAP-IPILATDIDPIAVTVAAENAAKNGVAEHIVT 200 Query: 153 LQSDWFSSV----EGLFDVIVSN 171 ++ F FD+IV+N Sbjct: 201 ATAEGFGHPIFRSYSPFDLIVAN 223 >gi|311695157|gb|ADP98030.1| rRNA (guanine-N(2)-)-methyltransferase [marine bacterium HP15] Length = 348 Score = 42.0 bits (97), Expect = 0.093, Method: Compositional matrix adjust. Identities = 28/86 (32%), Positives = 41/86 (47%), Gaps = 7/86 (8%) Query: 101 ILDLGTGTGAVCLALLKES-----PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155 +LD G G + L + P G+D+ +A+ A++ NGVS R + S Sbjct: 205 VLDFACGAGVLGAWLHRWQERQGLPRLTIDGIDVQSQAVICARATYERNGVSGRI--MAS 262 Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVD 181 D VEG + VI+SNPP+ V D Sbjct: 263 DGLPGVEGSWPVILSNPPFHSGVRTD 288 >gi|294815643|ref|ZP_06774286.1| Methyltransferase type 12 [Streptomyces clavuligerus ATCC 27064] gi|294328242|gb|EFG09885.1| Methyltransferase type 12 [Streptomyces clavuligerus ATCC 27064] Length = 535 Score = 42.0 bits (97), Expect = 0.093, Method: Compositional matrix adjust. Identities = 32/83 (38%), Positives = 45/83 (54%), Gaps = 5/83 (6%) Query: 68 SSDTFE-PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126 S+DT E P P E ++ LA + + R+LDLG G G + ALLK+ F + VG Sbjct: 286 STDTEEKPVPLAEQRREAILAA----LREAGAGRVLDLGCGQGQLVQALLKDVRFTEIVG 341 Query: 127 VDISCKALEIAKSNAVTNGVSER 149 VD+S +AL IA + + ER Sbjct: 342 VDVSVRALTIAGRRLRLDRMGER 364 >gi|296825008|ref|XP_002850746.1| conserved hypothetical protein [Arthroderma otae CBS 113480] gi|238838300|gb|EEQ27962.1| conserved hypothetical protein [Arthroderma otae CBS 113480] Length = 288 Score = 42.0 bits (97), Expect = 0.093, Method: Compositional matrix adjust. Identities = 33/90 (36%), Positives = 46/90 (51%), Gaps = 22/90 (24%) Query: 101 ILDLGTGTGAVCLALLKESPFFKG--VGVDISCKALEIAK---SNAVTNGVS-ERFDTLQ 154 ILDLGTG G++ L LL+E F G VGVD S K++E+A+ + G+ E +D L Sbjct: 105 ILDLGTGNGSM-LTLLREEGGFDGPMVGVDYSIKSIELARRLVGETASEGIRFEVWDILD 163 Query: 155 S---------------DWFSSVEGLFDVIV 169 DWF EG FD+++ Sbjct: 164 PKHEADIRDGVFGKDVDWFPFEEGGFDIVL 193 >gi|259419236|ref|ZP_05743153.1| SAM-dependent methyltransferase [Silicibacter sp. TrichCH4B] gi|259345458|gb|EEW57312.1| SAM-dependent methyltransferase [Silicibacter sp. TrichCH4B] Length = 405 Score = 42.0 bits (97), Expect = 0.094, Method: Compositional matrix adjust. Identities = 29/85 (34%), Positives = 42/85 (49%), Gaps = 15/85 (17%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVG----VDISCKALEIAKSNAVTNGVSERFDTLQ 154 R+LD+ + G LA+L G G VD S AL++A + A +G +RF+ Q Sbjct: 232 ARVLDVFSHVGGFGLAMLA-----AGAGHATCVDGSAAALDLATAGAAASGHGDRFEARQ 286 Query: 155 SDWFSSVEGL------FDVIVSNPP 173 D F + L FDV+V +PP Sbjct: 287 GDAFDVLTALGAEGAQFDVVVCDPP 311 >gi|325676589|ref|ZP_08156267.1| rRNA (guanine-N(2)-)-methyltransferase [Rhodococcus equi ATCC 33707] gi|325552767|gb|EGD22451.1| rRNA (guanine-N(2)-)-methyltransferase [Rhodococcus equi ATCC 33707] Length = 412 Score = 42.0 bits (97), Expect = 0.095, Method: Compositional matrix adjust. Identities = 49/154 (31%), Positives = 72/154 (46%), Gaps = 14/154 (9%) Query: 90 LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 LPR+ R+ +DLG GTG + ++L K P + + D S A+ A + A NGV+ R Sbjct: 262 LPRM--REAGTAVDLGCGTGILAVSLAKAQPSAEVIASDQSAAAVASAAATARANGVAAR 319 Query: 150 FDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDP--RISLDGGIDGLSHY 206 L+ D SS+ E D+I+ NPP+ V G + FD R+ GG Sbjct: 320 VRVLRDDALSSLPESSVDLILCNPPFHVGAAVHT-GSAGKMFDAAGRVLRPGG-----EL 373 Query: 207 RTIAD---GVSRHLNKDGLCSVEIGYNQKVDVVR 237 T+ + G R L + + E+G N K V R Sbjct: 374 WTVYNSHLGYKRALERAVGRTEEVGRNPKFTVTR 407 >gi|270265309|ref|ZP_06193570.1| methyltransferase small [Serratia odorifera 4Rx13] gi|270040713|gb|EFA13816.1| methyltransferase small [Serratia odorifera 4Rx13] Length = 476 Score = 42.0 bits (97), Expect = 0.095, Method: Compositional matrix adjust. Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 4/85 (4%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD-- 156 R+LD+G+G+G + L L + S + V++ A E A+ N + + +R D Sbjct: 277 RVLDIGSGSGLIALMLAQRSADNVLIDAVELDEAAAEQARDNVLASPWPQRIRVHAQDIH 336 Query: 157 -WFSSVEGLFDVIVSNPPYIESVIV 180 + G +D+IVSNPPY E + Sbjct: 337 HFARHHAGEYDLIVSNPPYFEPAVA 361 >gi|254390561|ref|ZP_05005776.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC 27064] gi|326443992|ref|ZP_08218726.1| hypothetical protein SclaA2_23139 [Streptomyces clavuligerus ATCC 27064] gi|197704263|gb|EDY50075.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC 27064] Length = 521 Score = 42.0 bits (97), Expect = 0.095, Method: Compositional matrix adjust. Identities = 32/83 (38%), Positives = 45/83 (54%), Gaps = 5/83 (6%) Query: 68 SSDTFE-PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126 S+DT E P P E ++ LA + + R+LDLG G G + ALLK+ F + VG Sbjct: 272 STDTEEKPVPLAEQRREAILAA----LREAGAGRVLDLGCGQGQLVQALLKDVRFTEIVG 327 Query: 127 VDISCKALEIAKSNAVTNGVSER 149 VD+S +AL IA + + ER Sbjct: 328 VDVSVRALTIAGRRLRLDRMGER 350 >gi|306843236|ref|ZP_07475846.1| ribosomal protein L11 methyltransferase [Brucella sp. BO2] gi|306286559|gb|EFM58138.1| ribosomal protein L11 methyltransferase [Brucella sp. BO2] Length = 285 Score = 42.0 bits (97), Expect = 0.096, Method: Compositional matrix adjust. Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 5/83 (6%) Query: 93 IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152 +E LDLGTG+ + +A+ + +P + DI A+ +A NA NGV+E T Sbjct: 142 VETEHPTNALDLGTGSAVLAIAIARLAP-IPILATDIDPIAVTVAAENAAKNGVAEHIVT 200 Query: 153 LQSDWFSSV----EGLFDVIVSN 171 ++ F FD+IV+N Sbjct: 201 ATAEGFGHPIFRSYSPFDLIVAN 223 >gi|254708090|ref|ZP_05169918.1| ribosomal protein L11 methyltransferase [Brucella pinnipedialis M163/99/10] gi|261315592|ref|ZP_05954789.1| ribosomal protein L11 methyltransferase [Brucella pinnipedialis M163/99/10] gi|261304618|gb|EEY08115.1| ribosomal protein L11 methyltransferase [Brucella pinnipedialis M163/99/10] Length = 267 Score = 42.0 bits (97), Expect = 0.096, Method: Compositional matrix adjust. Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 5/83 (6%) Query: 93 IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152 +E LDLGTG+ + +A+ + +P + DI A+ +A NA NGV+E T Sbjct: 142 VETEHPTNALDLGTGSAVLAIAIARLAP-IPILATDIDPIAVTVAAENAAKNGVAEHIVT 200 Query: 153 LQSDWFSSV----EGLFDVIVSN 171 ++ F FD+IV+N Sbjct: 201 ATAEGFGHPIFRSYSPFDLIVAN 223 >gi|167038525|ref|YP_001666103.1| methyltransferase small [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|167038733|ref|YP_001661718.1| methyltransferase small [Thermoanaerobacter sp. X514] gi|256751395|ref|ZP_05492274.1| methyltransferase small [Thermoanaerobacter ethanolicus CCSD1] gi|300913682|ref|ZP_07130999.1| putative RNA methylase [Thermoanaerobacter sp. X561] gi|307723303|ref|YP_003903054.1| RNA methylase [Thermoanaerobacter sp. X513] gi|320116921|ref|YP_004187080.1| RNA methylase [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|166852973|gb|ABY91382.1| methyltransferase small [Thermoanaerobacter sp. X514] gi|166857359|gb|ABY95767.1| methyltransferase small [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|256749777|gb|EEU62802.1| methyltransferase small [Thermoanaerobacter ethanolicus CCSD1] gi|300890367|gb|EFK85512.1| putative RNA methylase [Thermoanaerobacter sp. X561] gi|307580364|gb|ADN53763.1| RNA methylase [Thermoanaerobacter sp. X513] gi|319930012|gb|ADV80697.1| RNA methylase [Thermoanaerobacter brockii subsp. finnii Ako-1] Length = 248 Score = 42.0 bits (97), Expect = 0.096, Method: Compositional matrix adjust. Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 12/84 (14%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 +I+DLG GTG + + + ++ GV+I ++A + V N + ER ++ D Sbjct: 45 KIVDLGCGTGIIPILIAAKTYDTFIYGVEIQEDMADMATRSVVINKMEERIKIIKGD--- 101 Query: 160 SVEGL--------FDVIVSNPPYI 175 V GL FD++ SNPPY+ Sbjct: 102 -VRGLEKILGYEKFDIVTSNPPYM 124 >gi|323352583|gb|EGA85082.1| Mtq1p [Saccharomyces cerevisiae VL3] Length = 195 Score = 42.0 bits (97), Expect = 0.097, Method: Compositional matrix adjust. Identities = 36/139 (25%), Positives = 61/139 (43%), Gaps = 6/139 (4%) Query: 41 AIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL-AFSLPRIEKRDV- 98 A ++ KH + IL + F + + PR ETE V + + A + + + + Sbjct: 52 ACLQRYKHVPLQYILRSQPFGALDIVCKPGVLIPRWETEEWVMAIIRALNNSMLSRHTIP 111 Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE----RFDTLQ 154 + I D TGTG + LAL +D+S +A+++ K N + N VS + + L Sbjct: 112 LHICDTFTGTGCIALALSHGIANCTFTAIDVSTRAIKLVKENMLKNKVSGGKLVQHNILS 171 Query: 155 SDWFSSVEGLFDVIVSNPP 173 S D++ NPP Sbjct: 172 SKASDEYPSHIDILTGNPP 190 >gi|297560848|ref|YP_003679822.1| methyltransferase type 12 [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296845296|gb|ADH67316.1| Methyltransferase type 12 [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 314 Score = 42.0 bits (97), Expect = 0.097, Method: Compositional matrix adjust. Identities = 27/64 (42%), Positives = 34/64 (53%) Query: 97 DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 D RI+DLG GTGA ALL P + VD S L+ + A GV ER T+++D Sbjct: 78 DPRRIVDLGCGTGAGTFALLDRFPGARVTAVDTSDGHLQRLNAKARALGVEERVRTVRAD 137 Query: 157 WFSS 160 SS Sbjct: 138 LDSS 141 >gi|294852744|ref|ZP_06793417.1| 50S ribosomal protein L11 methyltransferase [Brucella sp. NVSL 07-0026] gi|294821333|gb|EFG38332.1| 50S ribosomal protein L11 methyltransferase [Brucella sp. NVSL 07-0026] Length = 283 Score = 42.0 bits (97), Expect = 0.097, Method: Compositional matrix adjust. Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 5/83 (6%) Query: 93 IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152 +E LDLGTG+ + +A+ + +P + DI A+ +A NA NGV+E T Sbjct: 142 VETEHPTNALDLGTGSAVLAIAIARLAP-IPILATDIDPIAVTVAAENAAKNGVAEHIVT 200 Query: 153 LQSDWFSSV----EGLFDVIVSN 171 ++ F FD+IV+N Sbjct: 201 ATAEGFGHPIFRSYSPFDLIVAN 223 >gi|294497118|ref|YP_003560818.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Bacillus megaterium QM B1551] gi|294347055|gb|ADE67384.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Bacillus megaterium QM B1551] Length = 457 Score = 42.0 bits (97), Expect = 0.097, Method: Compositional matrix adjust. Identities = 44/154 (28%), Positives = 81/154 (52%), Gaps = 29/154 (18%) Query: 41 AIVRSLKHESIHRILG------WRDFY------NVRLTLSSDTF-EPRPE-TELLVDSAL 86 +IV+++ + + ILG W + Y +V+ +S+ +F + PE T++L D AL Sbjct: 244 SIVQNVNSKRTNVILGNQTNVLWGEEYIYDYIGDVKFAISAKSFYQVNPEQTKVLYDKAL 303 Query: 87 AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146 ++ E+ ++D G G + L L +++ K GV+I +A+E AK NA NG+ Sbjct: 304 EYADLTGEET----VIDAYCGIGTISLFLAQKAK--KVYGVEIVPEAIEDAKRNAELNGI 357 Query: 147 -SERFDTLQSD-----WFSSVEGL-FDVIVSNPP 173 + F+ +++ W+ +G+ DVIV +PP Sbjct: 358 HNAEFEVGEAEVVIPNWYK--QGIKADVIVVDPP 389 >gi|62181217|ref|YP_217634.1| hypothetical protein SC2647 [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|62128850|gb|AAX66553.1| putative transferase [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|322715705|gb|EFZ07276.1| tRNA (adenine-N(6)-)-methyltransferase [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 287 Score = 42.0 bits (97), Expect = 0.097, Method: Compositional matrix adjust. Identities = 29/85 (34%), Positives = 43/85 (50%), Gaps = 6/85 (7%) Query: 97 DVVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQS 155 DV RILD+GTG+G + L L + + + V++ A A+ N + R T+ + Sbjct: 68 DVKRILDIGTGSGLLALMLAQRTDDNVPIDAVELDAGAAMQAQENVAHSPWPHRI-TVHT 126 Query: 156 D----WFSSVEGLFDVIVSNPPYIE 176 D W FD+I+SNPPY E Sbjct: 127 DDIQRWAPRQTVRFDLIISNPPYYE 151 >gi|319775650|ref|YP_004138138.1| O-methyltransferase [Haemophilus influenzae F3047] gi|329122298|ref|ZP_08250886.1| metallothionein SmtA [Haemophilus aegyptius ATCC 11116] gi|317450241|emb|CBY86457.1| predicted O-methyltransferase [Haemophilus influenzae F3047] gi|327473859|gb|EGF19276.1| metallothionein SmtA [Haemophilus aegyptius ATCC 11116] Length = 232 Score = 42.0 bits (97), Expect = 0.097, Method: Compositional matrix adjust. Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 4/84 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD--- 156 ILD+G GTG + L L + + + V++ A + A+ N + R Q+D Sbjct: 39 ILDMGCGTGLLALMLAQRTEENCQIQAVELDPIAAKQAQENINNSVWKNRIQLTQADIQH 98 Query: 157 WFSSVEGLFDVIVSNPPYIESVIV 180 + + E FD+IV+NPPY E I Sbjct: 99 FLQTTEQTFDLIVANPPYFEQGIA 122 >gi|315659118|ref|ZP_07911983.1| methyltransferase domain protein [Staphylococcus lugdunensis M23590] gi|315495842|gb|EFU84172.1| methyltransferase domain protein [Staphylococcus lugdunensis M23590] Length = 202 Score = 42.0 bits (97), Expect = 0.097, Method: Compositional matrix adjust. Identities = 36/135 (26%), Positives = 62/135 (45%), Gaps = 15/135 (11%) Query: 40 NAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV 99 IV S +H+ + + F ++ SD LL+ + L P K Sbjct: 16 QTIVYSYQHDKLQLVTDAGVFSKDKVDFGSD---------LLIQTFLNEHPPGPSKS--- 63 Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 I+D+G G G + L + K P K +D++ +AL +A+ N+ N + + +SD S Sbjct: 64 -IVDVGCGYGPIGLTIAKICPHHKVTMLDVNQRALALAEKNSKHNQI-DNVIIKESDGLS 121 Query: 160 SVE-GLFDVIVSNPP 173 +V+ D I++NPP Sbjct: 122 AVKHNACDYILTNPP 136 >gi|119487934|ref|ZP_01621431.1| hypothetical protein L8106_28761 [Lyngbya sp. PCC 8106] gi|119455510|gb|EAW36648.1| hypothetical protein L8106_28761 [Lyngbya sp. PCC 8106] Length = 239 Score = 42.0 bits (97), Expect = 0.097, Method: Compositional matrix adjust. Identities = 31/82 (37%), Positives = 43/82 (52%), Gaps = 6/82 (7%) Query: 101 ILDLGTGTGAVCLALLKESPF-FKGVGVDISCKALEIAKSNAVTNGVSERF--DTLQ-SD 156 ILD+GTGTG V L L + S V +D C ++ AK N + ER D L D Sbjct: 44 ILDIGTGTGLVALMLAQRSTAQIDAVEID-ECSCIQ-AKENIELSPWKERIKVDNLSVQD 101 Query: 157 WFSSVEGLFDVIVSNPPYIESV 178 + S +++IVSNPP+ E+ Sbjct: 102 YTKSCSKRYNLIVSNPPFFENA 123 >gi|15889356|ref|NP_355037.1| ribosomal protein L11 methyltransferase [Agrobacterium tumefaciens str. C58] gi|38605383|sp|Q8UDP9|PRMA_AGRT5 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11 Mtase gi|15157200|gb|AAK87822.1| ribosomal protein L11 methyltransferase [Agrobacterium tumefaciens str. C58] Length = 292 Score = 42.0 bits (97), Expect = 0.097, Method: Compositional matrix adjust. Identities = 47/151 (31%), Positives = 69/151 (45%), Gaps = 28/151 (18%) Query: 93 IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS----- 147 + R V LDLGTG+G + +A+ K P + DI A+++AK N NG+ Sbjct: 147 LRARKVRNALDLGTGSGVLAIAVRKMRP-IPVLATDIDPIAVKVAKENVRLNGIVSGMAL 205 Query: 148 ERFDTLQSDWFSSVEGLFDVIVSN---PPYIE-------------SVIVDCLGLEVRDFD 191 E SD F G FD+I++N P I+ +VI+ + L + + Sbjct: 206 ETAPGFHSDAFRK-HGPFDLIIANILARPLIKMAPQLVTHLAPGGTVILSGI-LASQRWK 263 Query: 192 PRISLDGGIDGLSHYRTI--ADGVSRHLNKD 220 + +G LSH RTI D V+ HL KD Sbjct: 264 VLSAYNGA--KLSHIRTIWRNDWVTLHLRKD 292 >gi|226942497|ref|YP_002797570.1| SAM-dependent methyltransferase [Azotobacter vinelandii DJ] gi|226717424|gb|ACO76595.1| SAM-dependent methyltransferase [Azotobacter vinelandii DJ] Length = 397 Score = 42.0 bits (97), Expect = 0.097, Method: Compositional matrix adjust. Identities = 33/113 (29%), Positives = 56/113 (49%), Gaps = 30/113 (26%) Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPP-YIESVI 179 VD S AL+ + NA NGV+E+ ++ D F +++ L FDV++++PP +I+ Sbjct: 249 VDGSALALDGVERNAALNGVAEKMACVEGDVFEAMKELKAAEERFDVVIADPPAFIK--- 305 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL-----CSVEI 227 R D + +G + YR + + R LNKDG+ CS+ + Sbjct: 306 --------RKKDLK-------NGEAAYRRLNEAAMRLLNKDGILVSASCSMHL 343 >gi|312110153|ref|YP_003988469.1| methyltransferase type 12 [Geobacillus sp. Y4.1MC1] gi|311215254|gb|ADP73858.1| Methyltransferase type 12 [Geobacillus sp. Y4.1MC1] Length = 247 Score = 42.0 bits (97), Expect = 0.098, Method: Compositional matrix adjust. Identities = 27/77 (35%), Positives = 39/77 (50%), Gaps = 6/77 (7%) Query: 74 PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133 P + +L V L + ++ RILD+G GTG + + L KE F GVD+S Sbjct: 18 PYEQWQLFVQK----KLKQYGRKGAKRILDIGCGTGELAIRLAKEG--FLVTGVDLSENM 71 Query: 134 LEIAKSNAVTNGVSERF 150 L IA++ A T V+ F Sbjct: 72 LAIAQAKAETQHVAIEF 88 >gi|238759675|ref|ZP_04620835.1| Methyltransferase small [Yersinia aldovae ATCC 35236] gi|238702103|gb|EEP94660.1| Methyltransferase small [Yersinia aldovae ATCC 35236] Length = 219 Score = 42.0 bits (97), Expect = 0.098, Method: Compositional matrix adjust. Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 4/85 (4%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 R+LD+G G+G + L + + S + GV++ A + A SNA ++ + R + D Sbjct: 21 RVLDIGCGSGLIALMIAQRSASDVLIDGVELEPAAAQQAISNAESSPWAARVHIYEQDVH 80 Query: 159 SSVEG---LFDVIVSNPPYIESVIV 180 E +D+IVSNPPY + Sbjct: 81 QFAENHPQQYDLIVSNPPYFAPAVA 105 >gi|329297697|ref|ZP_08255033.1| methyltransferase small [Plautia stali symbiont] Length = 249 Score = 42.0 bits (97), Expect = 0.099, Method: Compositional matrix adjust. Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 4/81 (4%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 V RILD+G G+G + L L + +P + V++ A A+ N + + R D Sbjct: 49 VRRILDIGCGSGLIALMLAQRTPDDVSIDAVELERSAAAQAQENVAASPWAHRIAVHAQD 108 Query: 157 ---WFSSVEGLFDVIVSNPPY 174 W E + +IVSNPP+ Sbjct: 109 IVSWREQAEKRYSLIVSNPPF 129 >gi|306818494|ref|ZP_07452217.1| possible 16S rRNA methyltransferase [Mobiluncus mulieris ATCC 35239] gi|307700681|ref|ZP_07637706.1| methyltransferase small domain protein [Mobiluncus mulieris FB024-16] gi|304648667|gb|EFM45969.1| possible 16S rRNA methyltransferase [Mobiluncus mulieris ATCC 35239] gi|307613676|gb|EFN92920.1| methyltransferase small domain protein [Mobiluncus mulieris FB024-16] Length = 268 Score = 42.0 bits (97), Expect = 0.099, Method: Compositional matrix adjust. Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 1/73 (1%) Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSS 160 +D+G G G + L + ++ P + V VD++ +AL++ NA NG+ + Sbjct: 128 VDVGCGWGPLSLVMARQRPAARVVAVDVNARALDLTAKNARENGLGNLEVLAEAAALAQL 187 Query: 161 VEGLFDVIVSNPP 173 +G DVI SNPP Sbjct: 188 ADGSVDVIWSNPP 200 >gi|296454450|ref|YP_003661593.1| methyltransferase small [Bifidobacterium longum subsp. longum JDM301] gi|296183881|gb|ADH00763.1| methyltransferase small [Bifidobacterium longum subsp. longum JDM301] Length = 218 Score = 42.0 bits (97), Expect = 0.099, Method: Compositional matrix adjust. Identities = 32/86 (37%), Positives = 41/86 (47%), Gaps = 14/86 (16%) Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG--------VSERFDTL 153 LDLG G G + L L ESP VD++ +AL++ +NA NG V E L Sbjct: 63 LDLGCGWGPIALTLAFESPEANVWAVDVNERALDLTHANAQANGRTNIHTAQVDESSTPL 122 Query: 154 ----QSDWFSSVEG--LFDVIVSNPP 173 Q + +V G FD I SNPP Sbjct: 123 PAENQPAFCETVPGDLTFDAIWSNPP 148 >gi|118470628|ref|YP_886876.1| thiopurine S-methyltransferase (tpmt) superfamily protein [Mycobacterium smegmatis str. MC2 155] gi|118171915|gb|ABK72811.1| thiopurine S-methyltransferase (tpmt) superfamily protein [Mycobacterium smegmatis str. MC2 155] Length = 226 Score = 42.0 bits (97), Expect = 0.099, Method: Compositional matrix adjust. Identities = 33/118 (27%), Positives = 53/118 (44%), Gaps = 19/118 (16%) Query: 73 EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCK 132 EP+PE L+D+ +LD G G A L L + F VG+D S Sbjct: 30 EPQPEIRKLIDAGKFHG----------EVLDAGCGEAATALYLAAQG--FTTVGLDQSPT 77 Query: 133 ALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRD 189 A+E+A++ A G++ F+ F+ +G F IV +S + + +E+RD Sbjct: 78 AIELARAEAARRGLTNATFEVADISSFTGYDGRFGTIV------DSTLFHSMPVELRD 129 >gi|239927102|ref|ZP_04684055.1| methyltransferase [Streptomyces ghanaensis ATCC 14672] Length = 209 Score = 41.6 bits (96), Expect = 0.100, Method: Compositional matrix adjust. Identities = 33/107 (30%), Positives = 54/107 (50%), Gaps = 10/107 (9%) Query: 72 FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131 + P+ +TELL + +P +LD+GTG + LAL + VD+S Sbjct: 2 YAPQEDTELLAGALSDEPVP-----PGADVLDMGTG--SGALALEAARRGTRVTAVDVSW 54 Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIES 177 +A+ + NA+ GV R + + F V G FD+I++NPPY+ + Sbjct: 55 RAVCTTRLNALVAGVPVRVR--RGNLFDPVRGRSFDLILANPPYVPA 99 >gi|195576127|ref|XP_002077928.1| GD22808 [Drosophila simulans] gi|194189937|gb|EDX03513.1| GD22808 [Drosophila simulans] Length = 224 Score = 41.6 bits (96), Expect = 0.100, Method: Compositional matrix adjust. Identities = 31/106 (29%), Positives = 56/106 (52%), Gaps = 5/106 (4%) Query: 72 FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE-SPFFKGVGVDIS 130 +EP ++ LL+D AL L +++ ++LG+G+G + AL K+ + F + DI+ Sbjct: 18 YEPAEDSFLLLD-ALEKDLEYLDRLQPRLCVELGSGSGVIITALAKKLAGFSLCLATDIN 76 Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYI 175 KA + A NG R D+++ ++ DV++ NPPY+ Sbjct: 77 PKACNATRRTATRNGA--RLDSIRCSLADALRPRSVDVLLFNPPYV 120 >gi|148977179|ref|ZP_01813806.1| ribosomal protein L11 methyltransferase [Vibrionales bacterium SWAT-3] gi|145963461|gb|EDK28724.1| ribosomal protein L11 methyltransferase [Vibrionales bacterium SWAT-3] Length = 295 Score = 41.6 bits (96), Expect = 0.100, Method: Compositional matrix adjust. Identities = 35/112 (31%), Positives = 56/112 (50%), Gaps = 17/112 (15%) Query: 74 PRPET-ELLVDSALAFS----------LPRIEKRDVV--RILDLGTGTGAVCLALLKESP 120 P P+ +++D LAF L +E D+ ++D G G+G + +A +K Sbjct: 123 PEPDAVNVMLDPGLAFGTGTHPTTALCLEWLEGLDLTGKTVIDFGCGSGILAIAAIKLG- 181 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF-DVIVSN 171 K +G+DI +AL +K NA NGV+E+ + EGL DV+V+N Sbjct: 182 AEKVIGIDIDPQALLASKDNAERNGVAEQLEVFLPQ--DQPEGLLADVVVAN 231 >gi|91214962|ref|ZP_01251934.1| hypothetical protein P700755_11732 [Psychroflexus torquis ATCC 700755] gi|91186567|gb|EAS72938.1| hypothetical protein P700755_11732 [Psychroflexus torquis ATCC 700755] Length = 238 Score = 41.6 bits (96), Expect = 0.100, Method: Compositional matrix adjust. Identities = 40/136 (29%), Positives = 65/136 (47%), Gaps = 14/136 (10%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 V ILD+G GTG + L + + S F + + V+I A E N + +R SD Sbjct: 38 VQSILDVGAGTGILALQMAQRS-FAETIDAVEIDPDAFEECVDNFENSPWGDRLYCYHSD 96 Query: 157 WFS---SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213 + S +E +D+I+SNPP+ E + L + R R D ++ T+ GV Sbjct: 97 FHSFAEEMEETYDLIISNPPFFE--VSKNLSTKGRS-TARSQTD------LNFETLVLGV 147 Query: 214 SRHLNKDGLCSVEIGY 229 + L+++G SV + Y Sbjct: 148 NHLLHQEGNLSVIVPY 163 >gi|15677697|ref|NP_274858.1| ribosomal protein L11 methyltransferase [Neisseria meningitidis MC58] gi|38605482|sp|Q9JXW2|PRMA_NEIMB RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11 Mtase gi|7227119|gb|AAF42196.1| ribosomal protein L11 methyltransferase [Neisseria meningitidis MC58] gi|316985471|gb|EFV64418.1| ribosomal protein L11 methyltransferase [Neisseria meningitidis H44/76] gi|325133507|gb|EGC56170.1| ribosomal protein L11 methyltransferase [Neisseria meningitidis M13399] gi|325139522|gb|EGC62062.1| ribosomal protein L11 methyltransferase [Neisseria meningitidis CU385] gi|325143757|gb|EGC66074.1| ribosomal protein L11 methyltransferase [Neisseria meningitidis M01-240013] gi|325200920|gb|ADY96375.1| ribosomal protein L11 methyltransferase [Neisseria meningitidis H44/76] gi|325206774|gb|ADZ02227.1| ribosomal protein L11 methyltransferase [Neisseria meningitidis M04-240196] Length = 295 Score = 41.6 bits (96), Expect = 0.100, Method: Compositional matrix adjust. Identities = 29/74 (39%), Positives = 39/74 (52%), Gaps = 11/74 (14%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDW 157 +LD G G+G + +A LK F VGVDI +A+ K NA N V +F D L Sbjct: 167 VLDYGCGSGILTIAALKLGAGFA-VGVDIDEQAVRAGKDNAAQNNVDAQFFLPDGLP--- 222 Query: 158 FSSVEGLFDVIVSN 171 +G FDV+V+N Sbjct: 223 ----QGQFDVVVAN 232 >gi|328883362|emb|CCA56601.1| hypothetical protein SVEN_3315 [Streptomyces venezuelae ATCC 10712] Length = 516 Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust. Identities = 38/128 (29%), Positives = 54/128 (42%), Gaps = 15/128 (11%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 V LDLGTG+G L + + D++ +AL+ + +G E + L Sbjct: 163 VASALDLGTGSGIQALHAAQHATLV--TATDLNPRALDFTRLTLALSGARE-AELLTGSL 219 Query: 158 FSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216 F V+G +D+IVSNPP+ VI L R DGG+ G RT+ Sbjct: 220 FEPVDGDTYDLIVSNPPF---VISPGARLTYR--------DGGMGGDDLCRTLVQQAGER 268 Query: 217 LNKDGLCS 224 LN G Sbjct: 269 LNDGGYAQ 276 >gi|317499444|ref|ZP_07957711.1| methyltransferase type 11 [Lachnospiraceae bacterium 5_1_63FAA] gi|316893316|gb|EFV15531.1| methyltransferase type 11 [Lachnospiraceae bacterium 5_1_63FAA] Length = 244 Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust. Identities = 22/80 (27%), Positives = 42/80 (52%), Gaps = 4/80 (5%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+LDLGTGTG + + + ++ G++I + ++A + N + ++ + ++ D Sbjct: 43 RVLDLGTGTGILPILMEAKTKAVHLTGLEIQPEMAKMAARSVKLNHLEDKIEIVEGDIKE 102 Query: 160 S----VEGLFDVIVSNPPYI 175 + FD I SNPPY+ Sbjct: 103 ASAIFSHDSFDTITSNPPYM 122 >gi|300904241|ref|ZP_07122100.1| methyltransferase small domain protein [Escherichia coli MS 84-1] gi|301302942|ref|ZP_07209070.1| methyltransferase small domain protein [Escherichia coli MS 124-1] gi|300403774|gb|EFJ87312.1| methyltransferase small domain protein [Escherichia coli MS 84-1] gi|300841877|gb|EFK69637.1| methyltransferase small domain protein [Escherichia coli MS 124-1] gi|315256603|gb|EFU36571.1| methyltransferase small domain protein [Escherichia coli MS 85-1] Length = 219 Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust. Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 5/89 (5%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 V R LD+G G+G + L L + + + V++ +A A+ N + +ER + +D Sbjct: 19 VKRCLDIGAGSGLLALMLAQRTSDSVIIDAVELESEAAAQAQENINQSPWAERINVHTAD 78 Query: 157 ---WFSSVEGLFDVIVSNPPYIESVIVDC 182 W + FD+I+SNPPY + V+C Sbjct: 79 IQQWVTQQTARFDLIISNPPYYQQG-VEC 106 >gi|220908170|ref|YP_002483481.1| hypothetical protein Cyan7425_2774 [Cyanothece sp. PCC 7425] gi|219864781|gb|ACL45120.1| conserved hypothetical protein [Cyanothece sp. PCC 7425] Length = 254 Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust. Identities = 20/78 (25%), Positives = 41/78 (52%), Gaps = 1/78 (1%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 +++ G G G+ + L SPF + G D++ A +IA+S +++++ +FS Sbjct: 55 VVEFGCGEGSPVINALLRSPFSGTIHGYDLNASACDIAQSTITQYRLNQQYQIYNCSFFS 114 Query: 160 SVEGLFDVIVSNPPYIES 177 D +++NPPY+ + Sbjct: 115 FSHPQADYLIANPPYLPA 132 >gi|167033975|ref|YP_001669206.1| methyltransferase small [Pseudomonas putida GB-1] gi|166860463|gb|ABY98870.1| methyltransferase small [Pseudomonas putida GB-1] Length = 461 Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust. Identities = 26/71 (36%), Positives = 36/71 (50%), Gaps = 3/71 (4%) Query: 105 GTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL 164 GTG GA+ +A + S + + VDI+ AL N G + SD V G Sbjct: 162 GTGIGAIVIATARRSA--RVMAVDINDLALRYTAINVALAGHAN-VSVKHSDVLQDVTGT 218 Query: 165 FDVIVSNPPYI 175 FD+IV+NPPY+ Sbjct: 219 FDLIVANPPYM 229 >gi|332534744|ref|ZP_08410572.1| putative O-methyltransferase [Pseudoalteromonas haloplanktis ANT/505] gi|332035831|gb|EGI72315.1| putative O-methyltransferase [Pseudoalteromonas haloplanktis ANT/505] Length = 232 Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust. Identities = 30/77 (38%), Positives = 41/77 (53%), Gaps = 6/77 (7%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN---GVSERFDTLQSDW 157 +LD+GTGTG + L + S V+I A A N + +S + T+QS Sbjct: 39 LLDIGTGTGLLALMCKQRSNELDITAVEIDESAYTQALQNVANSPWPTISIKHQTIQS-- 96 Query: 158 FSSVEGLFDVIVSNPPY 174 FSS E FDV++SNPPY Sbjct: 97 FSS-EVKFDVVISNPPY 112 >gi|306844316|ref|ZP_07476908.1| ribosomal protein L11 methyltransferase [Brucella sp. BO1] gi|306275388|gb|EFM57129.1| ribosomal protein L11 methyltransferase [Brucella sp. BO1] Length = 285 Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust. Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 5/83 (6%) Query: 93 IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152 +E LDLGTG+ + +A+ + +P + DI A+ +A NA NGV+E T Sbjct: 142 VETEHPTNALDLGTGSAVLAIAIARLAP-IPILATDIDPIAVTVAAENAAKNGVAEHIVT 200 Query: 153 LQSDWFSSV----EGLFDVIVSN 171 ++ F FD+IV+N Sbjct: 201 ATAEGFGHPIFRSYSPFDLIVAN 223 >gi|148827622|ref|YP_001292375.1| hypothetical protein CGSHiGG_05325 [Haemophilus influenzae PittGG] gi|262828400|sp|A5UGT6|TRMN6_HAEIG RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName: Full=tRNA m6A37 methyltransferase gi|148718864|gb|ABQ99991.1| hypothetical protein CGSHiGG_05325 [Haemophilus influenzae PittGG] Length = 232 Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust. Identities = 26/84 (30%), Positives = 44/84 (52%), Gaps = 4/84 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD--- 156 ILD+G+GTG + L L + + + V++ A++ A+ N + R +Q+D Sbjct: 39 ILDMGSGTGLLALMLAQRTEENCQIQAVELDPIAVKQAQENINDSVWKNRIQLIQTDIQH 98 Query: 157 WFSSVEGLFDVIVSNPPYIESVIV 180 + + FD+IV+NPPY E I Sbjct: 99 FLQTTAQTFDLIVANPPYFEQGIA 122 >gi|237741752|ref|ZP_04572233.1| methyltransferase [Fusobacterium sp. 4_1_13] gi|256845080|ref|ZP_05550538.1| methyltransferase [Fusobacterium sp. 3_1_36A2] gi|294785634|ref|ZP_06750922.1| DNA methylase [Fusobacterium sp. 3_1_27] gi|229429400|gb|EEO39612.1| methyltransferase [Fusobacterium sp. 4_1_13] gi|256718639|gb|EEU32194.1| methyltransferase [Fusobacterium sp. 3_1_36A2] gi|294487348|gb|EFG34710.1| DNA methylase [Fusobacterium sp. 3_1_27] Length = 243 Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust. Identities = 36/119 (30%), Positives = 62/119 (52%), Gaps = 16/119 (13%) Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 N+++ SD F +DS L I+K + +ILDLGTG A+ L L K++ Sbjct: 15 NLKIIQRSDYFN------FSIDSLLISEFVNIQK-NTKKILDLGTGNAAIPLFLSKKTS- 66 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSER----FDTLQS--DWFSSVEGLFDVIVSNPPY 174 K G++I + +A N N ++E+ +D +++ +F+ FD+I+SNPP+ Sbjct: 67 AKIYGIEIQEISYNLALRNININNLNEQIYIIYDNMKNYLKYFNM--SFFDIIISNPPF 123 >gi|110680008|ref|YP_683015.1| hypothetical protein RD1_2799 [Roseobacter denitrificans OCh 114] gi|109456124|gb|ABG32329.1| conserved hypothetical protein [Roseobacter denitrificans OCh 114] Length = 407 Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust. Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 7/81 (8%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 R+LD+ + G LA L + VD S AL +A++ A +G ++RF T Q D F Sbjct: 235 ARVLDVFSHVGGFSLAALAGG-AQSALAVDGSAAALTLAEAGAKASGCADRFQTRQGDAF 293 Query: 159 SSVEGL------FDVIVSNPP 173 + L FD+++ +PP Sbjct: 294 EVLAALAQEGAQFDLVICDPP 314 >gi|238794626|ref|ZP_04638232.1| Ribosomal protein L11 methyltransferase [Yersinia intermedia ATCC 29909] gi|238726015|gb|EEQ17563.1| Ribosomal protein L11 methyltransferase [Yersinia intermedia ATCC 29909] Length = 293 Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust. Identities = 39/120 (32%), Positives = 62/120 (51%), Gaps = 18/120 (15%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159 ++D G G+G + +A LK + +G+DI +A++ ++ NA NGVSER + L D + Sbjct: 162 VIDFGCGSGILAIAALKLG-ATRAIGIDIDPQAIQASRDNAQRNGVSERLELYLAKDQPA 220 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS---LDGGIDGLSH-YRTIADGVSR 215 + DV+V+N L +R+ P IS + GG GLS T A GV++ Sbjct: 221 DLSA--DVVVAN----------ILAGPLRELAPLISVLPVAGGHLGLSGVLATQALGVAQ 268 >gi|332366113|gb|EGJ43869.1| ribosomal RNA small subunit methyltransferase D [Streptococcus sanguinis SK1059] Length = 182 Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust. Identities = 44/170 (25%), Positives = 73/170 (42%), Gaps = 19/170 (11%) Query: 61 YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120 Y RL + D RP T+ + + P D R+LDL G+G++ + + Sbjct: 11 YGGRLLKTLDGKTTRPTTDKVKGAIFNMIGPYF---DGGRVLDLYAGSGSLAIEAISRG- 66 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYI-E 176 + V V+ +A I N ERFD L+ + ++E G FD+++ +PPY E Sbjct: 67 MEEAVLVERDRRAQAIISENIQMTKEPERFDLLKMESGRALEILTGAFDLVLLDPPYAKE 126 Query: 177 SVIVDCLGLE-----------VRDFDPRISLDGGIDGLSHYRTIADGVSR 215 ++ D LE V + D + L I GL ++ G+S+ Sbjct: 127 QIVADLEKLEESRLLSQDVLVVCETDKEVELPEEIAGLGIWKQKIYGISK 176 >gi|297155053|gb|ADI04765.1| hypothetical protein SBI_01644 [Streptomyces bingchenggensis BCW-1] Length = 257 Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust. Identities = 32/87 (36%), Positives = 45/87 (51%), Gaps = 7/87 (8%) Query: 86 LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145 L LPR ++R +LDLG G G L L P G+DIS AL A++ A G Sbjct: 41 LEVGLPRGDER----VLDLGCGGGEWLLRALSAQPKVHAEGIDISEPALVDARAAAERLG 96 Query: 146 VSER--FDTLQSDWFSSVEGLFDVIVS 170 V++R ++D FSS FD+++S Sbjct: 97 VADRLVLHQQEADGFSSRHS-FDLVLS 122 >gi|194017567|ref|ZP_03056178.1| methyltransferase small domain superfamily [Bacillus pumilus ATCC 7061] gi|194010839|gb|EDW20410.1| methyltransferase small domain superfamily [Bacillus pumilus ATCC 7061] Length = 228 Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust. Identities = 28/75 (37%), Positives = 42/75 (56%), Gaps = 3/75 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 ILD+G G G + L+L E +D++ +A+E++K NA N V + QSD FS+ Sbjct: 89 ILDVGCGYGPIGLSLANEMTSRTIHMIDVNERAVELSKENAKHNRV-DNVRIYQSDLFSN 147 Query: 161 VE--GLFDVIVSNPP 173 V F I++NPP Sbjct: 148 VHSSAAFASILTNPP 162 >gi|123443996|ref|YP_001007966.1| ribosomal protein L11 methyltransferase [Yersinia enterocolitica subsp. enterocolitica 8081] gi|166223501|sp|A1JRL5|PRMA_YERE8 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11 Mtase gi|122090957|emb|CAL13839.1| ribosomal protein L11 methyltransferase [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 293 Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust. Identities = 39/120 (32%), Positives = 61/120 (50%), Gaps = 18/120 (15%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159 ++D G G+G + +A LK +G+DI +A++ ++ NA NGVSER + L D + Sbjct: 162 VIDFGCGSGILAIAALKLG-AAHAIGIDIDPQAIQASRDNAQRNGVSERLELYLAKDQPA 220 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS---LDGGIDGLSH-YRTIADGVSR 215 + DV+V+N L +R+ P IS + GG GLS T A GV++ Sbjct: 221 DLSA--DVVVAN----------ILAGPLRELAPLISVLPVAGGHLGLSGVLATQAAGVAQ 268 >gi|313898203|ref|ZP_07831741.1| methyltransferase small domain protein [Clostridium sp. HGF2] gi|312956967|gb|EFR38597.1| methyltransferase small domain protein [Clostridium sp. HGF2] Length = 203 Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust. Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 3/75 (4%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LD+G G G V + K P + VD++ +A+E+A+ NA N + SD + Sbjct: 62 QLLDMGCGYGVVGIVTKKAWPDKQVEMVDVNPRAVELARDNAEKNNIEANIHV--SDVYE 119 Query: 160 SVEG-LFDVIVSNPP 173 V G F I++NPP Sbjct: 120 QVSGNTFTDIITNPP 134 >gi|283457419|ref|YP_003361995.1| methylase of polypeptide chain release factor [Rothia mucilaginosa DY-18] gi|283133410|dbj|BAI64175.1| methylase of polypeptide chain release factor [Rothia mucilaginosa DY-18] Length = 618 Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust. Identities = 38/119 (31%), Positives = 52/119 (43%), Gaps = 16/119 (13%) Query: 94 EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS------ 147 E+ V R LD+GTG G LL + DIS +AL A+ N + N + Sbjct: 215 ERTPVKRALDVGTGCGIQTFHLLAHAEHV--TATDISERALAFARFNLLLNAQALNIDPQ 272 Query: 148 ---ERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202 R + V G LFD++VSNPP++ + V E F R DGG+ G Sbjct: 273 NPQARVSLREGSLLEPVAGELFDLVVSNPPFVITPRVAGESAE-EQFTYR---DGGLPG 327 >gi|71909548|ref|YP_287135.1| ribosomal protein L11 methyltransferase [Dechloromonas aromatica RCB] gi|123626321|sp|Q478R6|PRMA_DECAR RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11 Mtase gi|71849169|gb|AAZ48665.1| [LSU ribosomal protein L11P]-lysine N-methyltransferase [Dechloromonas aromatica RCB] Length = 296 Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust. Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 9/77 (11%) Query: 97 DVVRILDLGTGTGAVCLALLKESPFFKG--VGVDISCKALEIAKSNAVTNGVSERFDTLQ 154 + +LD G G+G + +A + G GVDI +A+E A++NA NGV+ F Sbjct: 164 EACTVLDYGCGSGILAIAAAR---LGAGHVAGVDIDPQAVEAARANAERNGVTALF---- 216 Query: 155 SDWFSSVEGLFDVIVSN 171 +D + V G +DV+V+N Sbjct: 217 ADSATPVAGEYDVVVAN 233 >gi|14590965|ref|NP_143040.1| RNA methyltransferase [Pyrococcus horikoshii OT3] gi|50401321|sp|O58864|Y1137_PYRHO RecName: Full=Uncharacterized RNA methyltransferase PH1137 gi|3257554|dbj|BAA30237.1| 407aa long hypothetical RNA methyltransferase [Pyrococcus horikoshii OT3] Length = 407 Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust. Identities = 28/76 (36%), Positives = 42/76 (55%), Gaps = 4/76 (5%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+LD+ +G G + L K FK VG D + A+E+A+ NA N V FD + +D Sbjct: 274 RVLDMYSGVGTFGIYLAKRG--FKVVGFDSNEFAIEMARKNAKINKVDAVFD-VATDREV 330 Query: 160 SVEGLFDVIVSNPPYI 175 V G FD ++ +PP + Sbjct: 331 EVNG-FDTVIVDPPRV 345 >gi|328865954|gb|EGG14340.1| hypothetical protein DFA_12110 [Dictyostelium fasciculatum] Length = 707 Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust. Identities = 38/139 (27%), Positives = 69/139 (49%), Gaps = 16/139 (11%) Query: 70 DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL---LKESPFFKGVG 126 D +EP ++ L ++ AL L ++ + ++++G+G+G V L L+ + +F + Sbjct: 26 DVYEPAQDSYLFIN-ALKKDLDDLKLLNPSFVIEIGSGSGFVISYLAKILENNGYF--MS 82 Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVIVDCL 183 DI+ A ++ A N VS D + + + + +E G DV++ NPPY+ + Sbjct: 83 TDINPIAARVSSRTATHNNVS--LDVINTSFLTGIERVKGKVDVLLFNPPYVPTE----- 135 Query: 184 GLEVRDFDPRISLDGGIDG 202 E+ D S GGIDG Sbjct: 136 SEEIEDGGIAASWAGGIDG 154 >gi|268594824|ref|ZP_06128991.1| hypothetical protein NGBG_01115 [Neisseria gonorrhoeae 35/02] gi|268596794|ref|ZP_06130961.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19] gi|268603724|ref|ZP_06137891.1| methyltransferase [Neisseria gonorrhoeae PID1] gi|268682195|ref|ZP_06149057.1| conserved hypothetical protein [Neisseria gonorrhoeae PID332] gi|268684346|ref|ZP_06151208.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-92-679] gi|268548213|gb|EEZ43631.1| hypothetical protein NGBG_01115 [Neisseria gonorrhoeae 35/02] gi|268550582|gb|EEZ45601.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19] gi|268587855|gb|EEZ52531.1| methyltransferase [Neisseria gonorrhoeae PID1] gi|268622479|gb|EEZ54879.1| conserved hypothetical protein [Neisseria gonorrhoeae PID332] gi|268624630|gb|EEZ57030.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-92-679] gi|317164270|gb|ADV07811.1| hypothetical protein NGTW08_0843 [Neisseria gonorrhoeae TCDC-NG08107] Length = 135 Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust. Identities = 27/95 (28%), Positives = 49/95 (51%), Gaps = 5/95 (5%) Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 D+GTG+G V A+L + +G D + +A+ A++N G ++ + ++D F Sbjct: 35 FDIGTGSG-VLAAILAKQGIPSVIGTDTNPRAVACARANIARLGFEKQVEIRETDLFP-- 91 Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL 196 EG D+IV NPP + + +E +DP ++ Sbjct: 92 EGFADLIVCNPPRLPAKPTSA--VESALYDPESAM 124 >gi|227538469|ref|ZP_03968518.1| possible methyltransferase [Sphingobacterium spiritivorum ATCC 33300] gi|227241655|gb|EEI91670.1| possible methyltransferase [Sphingobacterium spiritivorum ATCC 33300] Length = 147 Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust. Identities = 27/79 (34%), Positives = 40/79 (50%), Gaps = 3/79 (3%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 ILD+GTGTG + L L + V+I A + AK N + + SER Q Sbjct: 37 AAHILDIGTGTGVIALMLAQRFENATLEAVEIDALAADRAKQNFLNSPFSERM-YAQHVS 95 Query: 158 FSSVEGL--FDVIVSNPPY 174 F + + +D+I+SNPP+ Sbjct: 96 FEDLHPVSKYDLIISNPPF 114 >gi|227486795|ref|ZP_03917111.1| TrmA family RNA methyltransferase [Anaerococcus lactolyticus ATCC 51172] gi|227235265|gb|EEI85280.1| TrmA family RNA methyltransferase [Anaerococcus lactolyticus ATCC 51172] Length = 456 Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust. Identities = 32/90 (35%), Positives = 48/90 (53%), Gaps = 8/90 (8%) Query: 87 AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146 AF L I+K + ILDL +GTG + L S G++I +A+E AK NA NG+ Sbjct: 304 AFDLAEIDK--TMDILDLYSGTGTI--TQLMASVAKSATGIEIVEEAVEKAKENARINGL 359 Query: 147 SERFDTLQSDWFSSVEGL---FDVIVSNPP 173 + + L D +E + +DV+V +PP Sbjct: 360 -DNVNFLCGDVLEEIEKVGNKYDVVVLDPP 388 >gi|295702483|ref|YP_003595558.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Bacillus megaterium DSM 319] gi|294800142|gb|ADF37208.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Bacillus megaterium DSM 319] Length = 457 Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust. Identities = 44/154 (28%), Positives = 81/154 (52%), Gaps = 29/154 (18%) Query: 41 AIVRSLKHESIHRILG------WRDFY------NVRLTLSSDTF-EPRPE-TELLVDSAL 86 +IV+++ + + ILG W + Y +V+ +S+ +F + PE T++L D AL Sbjct: 244 SIVQNVNSKRTNVILGNQTNVLWGEEYIYDYIGDVKFAISAKSFYQVNPEQTKVLYDKAL 303 Query: 87 AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146 ++ E+ ++D G G + L L +++ K GV+I +A+E AK NA NG+ Sbjct: 304 EYADLTGEET----VIDAYCGIGTISLFLAQKAK--KVYGVEIVPEAIEDAKRNAELNGI 357 Query: 147 -SERFDTLQSD-----WFSSVEGL-FDVIVSNPP 173 + F+ +++ W+ +G+ DVIV +PP Sbjct: 358 HNAEFEVGEAEVVIPNWYK--QGIKADVIVVDPP 389 >gi|217966763|ref|YP_002352269.1| protein of unknown function Met10 [Dictyoglomus turgidum DSM 6724] gi|217335862|gb|ACK41655.1| protein of unknown function Met10 [Dictyoglomus turgidum DSM 6724] Length = 395 Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust. Identities = 32/83 (38%), Positives = 43/83 (51%), Gaps = 7/83 (8%) Query: 97 DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 D +LD+ TG L LK K V VD S ALEIAK NA NG +R + ++ + Sbjct: 217 DGAEVLDVFCYTGGFSLHALKYGAS-KVVAVDSSGIALEIAKENAKLNGFMDRIEFIEEN 275 Query: 157 WFSSV-----EGL-FDVIVSNPP 173 F + EG FDV++ +PP Sbjct: 276 AFDLLRRFHKEGRSFDVVILDPP 298 >gi|154482642|ref|ZP_02025090.1| hypothetical protein EUBVEN_00309 [Eubacterium ventriosum ATCC 27560] gi|149736542|gb|EDM52428.1| hypothetical protein EUBVEN_00309 [Eubacterium ventriosum ATCC 27560] Length = 214 Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust. Identities = 22/80 (27%), Positives = 43/80 (53%), Gaps = 4/80 (5%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R LDLGTGTG + + L ++ ++I ++ E+A+ + + N + +R + D Sbjct: 17 RALDLGTGTGIIPILLEAKTEGQDFEALEIQPESAEMARRSVMLNNLQDRIKIVDGDIKE 76 Query: 160 SVE----GLFDVIVSNPPYI 175 + + F+V+ +NPPY+ Sbjct: 77 ASKIFGAASFNVVTTNPPYM 96 >gi|145508435|ref|XP_001440167.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124407373|emb|CAK72770.1| unnamed protein product [Paramecium tetraurelia] Length = 457 Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust. Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 4/77 (5%) Query: 96 RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155 ++ V I DLG GTG + L KE + +GV+I K +E+AK N + V+ D + + Sbjct: 143 KEFVIITDLGCGTGGNTVQLAKECHYV--IGVEIDSKFIELAKKNCQNSIVN--VDLINA 198 Query: 156 DWFSSVEGLFDVIVSNP 172 D F+ DVI NP Sbjct: 199 DIFTLNNLQTDVIFVNP 215 >gi|37528084|ref|NP_931429.1| 16S ribosomal RNA m2G1207 methyltransferase [Photorhabdus luminescens subsp. laumondii TTO1] gi|81418259|sp|Q7MZN0|RSMC_PHOLL RecName: Full=Ribosomal RNA small subunit methyltransferase C; AltName: Full=16S rRNA m2G1207 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rsmC gi|36787521|emb|CAE16624.1| ribosomal RNA small subunit methyltransferase C (rRNA (guanine-N2-)-methyltransferase) (16S rRNA m2G1207 methyltransferase) [Photorhabdus luminescens subsp. laumondii TTO1] Length = 338 Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust. Identities = 38/139 (27%), Positives = 59/139 (42%), Gaps = 4/139 (2%) Query: 46 LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLG 105 L+HE W + Y V + + + EL V S L S +K +LD+ Sbjct: 147 LEHEVQFEQDNWWNSYQVENVIVNTLPGVFSQDELDVGSRLLLS--TFDKPLSGNLLDIA 204 Query: 106 TGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF 165 G G + L K++P D++ A IA S A + S+ +S++E F Sbjct: 205 CGAGVLAAVLGKKNPELALTLSDVNAAA--IASSKATLKANKLEGHVVVSNVYSNIEDKF 262 Query: 166 DVIVSNPPYIESVIVDCLG 184 D I+SNPP+ E + L Sbjct: 263 DWIISNPPFHEGLKTSLLA 281 >gi|15616937|ref|NP_240150.1| hypothetical protein BU328 [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|25403592|pir||D84968 hypothetical protein [imported] - Buchnera sp. (strain APS) gi|10039002|dbj|BAB13036.1| hypothetical protein [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] Length = 280 Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust. Identities = 28/93 (30%), Positives = 48/93 (51%), Gaps = 2/93 (2%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 +DS R ++LD+G GTG + +LL SP VD + AL+ ++ Sbjct: 124 IDSGSKLLASTFSNRITGKVLDIGCGTGFLSASLLYFSPDAILTLVDNNMYALKCSQYTL 183 Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174 +N + + + S+ +S+V FD+I+SNPP+ Sbjct: 184 NSNKFNGK--IVYSNLYSNVFKKFDLIISNPPF 214 >gi|219681691|ref|YP_002468077.1| 16S rRNA m(2)G 1207 methyltransferase [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] gi|257471384|ref|ZP_05635383.1| 16S rRNA m(2)G 1207 methyltransferase [Buchnera aphidicola str. LSR1 (Acyrthosiphon pisum)] gi|219624534|gb|ACL30689.1| 16S rRNA m(2)G 1207 methyltransferase [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] gi|311086639|gb|ADP66720.1| 16S rRNA m(2)G 1207 methyltransferase [Buchnera aphidicola str. TLW03 (Acyrthosiphon pisum)] gi|311087224|gb|ADP67304.1| 16S rRNA m(2)G 1207 methyltransferase [Buchnera aphidicola str. JF99 (Acyrthosiphon pisum)] Length = 280 Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust. Identities = 28/93 (30%), Positives = 48/93 (51%), Gaps = 2/93 (2%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 +DS R ++LD+G GTG + +LL SP VD + AL+ ++ Sbjct: 124 IDSGSKLLASTFSNRITGKVLDIGCGTGFLSASLLYFSPDAILTLVDNNMYALKCSQYTL 183 Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174 +N + + + S+ +S+V FD+I+SNPP+ Sbjct: 184 NSNKFNGK--IVYSNLYSNVFKKFDLIISNPPF 214 >gi|168701079|ref|ZP_02733356.1| hypothetical protein GobsU_16247 [Gemmata obscuriglobus UQM 2246] Length = 466 Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust. Identities = 47/156 (30%), Positives = 70/156 (44%), Gaps = 31/156 (19%) Query: 13 RVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSL---------KHESIHRILGW---RDF 60 R+ L SH ++ P VLDD + ++++N V L H RI R Sbjct: 174 RLADLLSHLYVLVP--VLDDEKHYWVSNDEVEKLLRHGEGWLNSHPEKERIAERYLRRQS 231 Query: 61 YNVRLTLSS----DTFEP------------RPETEL-LVDSALAFSLPRIEKRDVVRILD 103 VR L++ DT EP R E+ + L + LA L ++ R+LD Sbjct: 232 KLVRSVLAALDPNDTEEPAEALAAQDLAEERLESRVSLHEHRLATVLGALQATGATRVLD 291 Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKS 139 LG G G + L + F + VGVD+S ++LEIA+ Sbjct: 292 LGCGEGKLLRLLAADPRFTEVVGVDVSVRSLEIARQ 327 >gi|156380522|ref|XP_001631817.1| predicted protein [Nematostella vectensis] gi|156218864|gb|EDO39754.1| predicted protein [Nematostella vectensis] Length = 215 Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust. Identities = 48/192 (25%), Positives = 81/192 (42%), Gaps = 10/192 (5%) Query: 72 FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK-ESPFFKGVGVDIS 130 +EP ++ L++D AL + + +++G+G+G + L P + DI+ Sbjct: 20 YEPAEDSFLMMD-ALEKDAQLLHEISPSVCVEVGSGSGVLITFLASITGPHSLYIATDIN 78 Query: 131 CKALEIAKSNAVTNG--VSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVR 188 KA A NG VS L S +S ++G DV++ NPPY+ + EV Sbjct: 79 AKAALCTTRTAKQNGCTVSAVVTDLLSSMYSRLKGKIDVLLFNPPYVATPTD-----EVA 133 Query: 189 DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG-LCSVEIGYNQKVDVVRIFESRKLFLV 247 + S GGI+G + VS L+ G V + N+ D++ E L Sbjct: 134 SEGIQASWAGGINGRQVTDRLLPVVSSLLSPKGCFYLVAVAENKPDDIICFLEKYGLHGE 193 Query: 248 NAFKDYGGNDRV 259 + G +R+ Sbjct: 194 TVLQRKAGCERL 205 >gi|229542299|ref|ZP_04431359.1| methyltransferase small [Bacillus coagulans 36D1] gi|229326719|gb|EEN92394.1| methyltransferase small [Bacillus coagulans 36D1] Length = 248 Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust. Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 5/82 (6%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LDL TG G + L LL + GV+I + ++AK + NG+ +R + D Sbjct: 48 KVLDLCTGNGVIPL-LLSNRTKAEITGVEIQERLSDMAKRSVAYNGLEDRIRIIHGDLKE 106 Query: 160 SVEGL----FDVIVSNPPYIES 177 + L FDV+ NPPY S Sbjct: 107 MPDVLGCSKFDVVTCNPPYFPS 128 >gi|121534803|ref|ZP_01666623.1| ribosomal protein L11 methyltransferase [Thermosinus carboxydivorans Nor1] gi|121306598|gb|EAX47520.1| ribosomal protein L11 methyltransferase [Thermosinus carboxydivorans Nor1] Length = 312 Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust. Identities = 53/211 (25%), Positives = 85/211 (40%), Gaps = 49/211 (23%) Query: 27 DSVLDDRQRFFLTNAIVRSLKHESIHRILG---------------WRDFYNVRLTLSSDT 71 D LDD+ R F A V L +++ G W+++++ Sbjct: 70 DDELDDKLRLF--EARVNELAQYQLNKGRGHIYWQEVQEEDWASSWKNYFHPVKVGEKIV 127 Query: 72 FEP------RPETELLV--DSALAFSLPRIEK--------RDVVR----ILDLGTGTG-- 109 +P + E E++V D +AF DV++ + D+GTG+G Sbjct: 128 IKPSWEEYNQAEGEIIVELDPGMAFGTGTHHTTAMCIRILEDVIKPGDVVFDVGTGSGIL 187 Query: 110 AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIV 169 AV A L + VD+ A+ +A NA NGVS Q D + G DV+V Sbjct: 188 AVVAAKLGAGAVY---AVDLDPVAVNVAVENASVNGVSHVVKVAQGDLLTGFTGTADVVV 244 Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200 +N +I D + V+D P+ +GG+ Sbjct: 245 AN------IIADVIIRLVKDV-PQKLKEGGV 268 >gi|332701731|ref|ZP_08421819.1| methyltransferase small [Desulfovibrio africanus str. Walvis Bay] gi|332551880|gb|EGJ48924.1| methyltransferase small [Desulfovibrio africanus str. Walvis Bay] Length = 320 Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust. Identities = 28/91 (30%), Positives = 40/91 (43%), Gaps = 16/91 (17%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+LDLGTG G V L L + VG++++ K+ A NA G+ R D + D Sbjct: 38 RLLDLGTGCGPVALGWLLRNSEGSAVGLELNPKSAACAWENAARLGLETRLDVREGDVRD 97 Query: 160 SVEG----------------LFDVIVSNPPY 174 +G FD++ NPPY Sbjct: 98 VRKGGNKLAASGGSARLEPESFDLVACNPPY 128 >gi|327469054|gb|EGF14526.1| ribosomal RNA small subunit methyltransferase D [Streptococcus sanguinis SK330] Length = 182 Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust. Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 16/131 (12%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+LDL G+G++ + + + V V+ +A I N ERFD L+ + Sbjct: 47 RVLDLYAGSGSLAIEAISRG-MEEAVLVERDRRAQAIISENIQMTKEPERFDLLKMESGR 105 Query: 160 SVE---GLFDVIVSNPPYIESVIVDCLG-LEVRDF-----------DPRISLDGGIDGLS 204 ++E G FD+++ +PPY + IV LG LE R D + L I GL Sbjct: 106 ALEMLTGAFDLVLLDPPYAKEQIVADLGKLEERQLLSQDVLVVCETDKEVELPEEIAGLG 165 Query: 205 HYRTIADGVSR 215 ++ G+S+ Sbjct: 166 IWKQKIYGISK 176 >gi|289706441|ref|ZP_06502799.1| methyltransferase small domain protein [Micrococcus luteus SK58] gi|289556936|gb|EFD50269.1| methyltransferase small domain protein [Micrococcus luteus SK58] Length = 215 Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust. Identities = 30/91 (32%), Positives = 47/91 (51%), Gaps = 6/91 (6%) Query: 84 SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143 +AL ++P R LD+G G G + L L SP + GV+++ ++L +A+ NA Sbjct: 52 AALLSAVPAPPARGA--FLDVGAGWGPLALTLALASPEAEVTGVEVNERSLALARDNAAA 109 Query: 144 NGVSE-RFDTLQSDWFSSVEGLFDVIVSNPP 173 G S RF T + + FD++ SNPP Sbjct: 110 VGASNARFLTPEQ---VPDDARFDLVWSNPP 137 >gi|260914552|ref|ZP_05921020.1| metallothionein SmtA [Pasteurella dagmatis ATCC 43325] gi|260631343|gb|EEX49526.1| metallothionein SmtA [Pasteurella dagmatis ATCC 43325] Length = 237 Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust. Identities = 42/153 (27%), Positives = 64/153 (41%), Gaps = 27/153 (17%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQ---S 155 RILDLGTGTG + L L + S + V++ AL A+ N + + + + Sbjct: 42 RILDLGTGTGLIALMLAQRSAEDCQISAVELDQAALLQAQENIQQSKWANKIHLYSQNIA 101 Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215 D+ ++ FD+IV+NPPY GID S R +A Sbjct: 102 DFCTNTVDKFDLIVANPPYFPQ---------------------GIDCSSKQRNLARYTEN 140 Query: 216 --HLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246 HL+ L S + K+ V FE+ ++ L Sbjct: 141 LTHLDWLDLASQCVSAQGKISFVLPFEAGEILL 173 >gi|212709069|ref|ZP_03317197.1| hypothetical protein PROVALCAL_00102 [Providencia alcalifaciens DSM 30120] gi|212687981|gb|EEB47509.1| hypothetical protein PROVALCAL_00102 [Providencia alcalifaciens DSM 30120] Length = 348 Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust. Identities = 26/101 (25%), Positives = 48/101 (47%), Gaps = 3/101 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 +LDL G G + + ++P D+S A++ A + N ++ + + SD +S Sbjct: 210 NVLDLACGNGVLAAVVGTQNPAVTLTLSDVSASAIDSATATLAANNLTGKI--IPSDVYS 267 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFD-PRISLDGG 199 ++ FD I+SNPP+ + + +E F P+ GG Sbjct: 268 DLDDKFDWIISNPPFHDGINTSYNAVETLIFQAPKYLKKGG 308 >gi|126649590|ref|ZP_01721831.1| RNA methyltransferase [Bacillus sp. B14905] gi|126593915|gb|EAZ87838.1| RNA methyltransferase [Bacillus sp. B14905] Length = 459 Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust. Identities = 44/154 (28%), Positives = 79/154 (51%), Gaps = 29/154 (18%) Query: 41 AIVRSLKHESIHRILG------W-RDFY-----NVRLTLSSDTF-EPRPE-TELLVDSAL 86 +I++++ HE + I G W +D +VR +S+ +F + PE TE+L AL Sbjct: 246 SIMQNVNHEKTNVIFGDDTLNLWGKDVIIDTIGDVRFEISARSFYQVNPEQTEVLYKQAL 305 Query: 87 AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146 ++ + ++R ++D G G + L L +++ +GV+I +A+E AK NAV NG Sbjct: 306 DYANLQGDER----VIDAYCGIGTISLFLAQKAKAV--MGVEIVPQAIEDAKRNAVLNGF 359 Query: 147 SERF------DTLQSDWFSSVEGL-FDVIVSNPP 173 + + + + W+ EG DV+V +PP Sbjct: 360 TNTYFEAGPAEEVIPRWYK--EGKEADVLVVDPP 391 >gi|269126682|ref|YP_003300052.1| methylase [Thermomonospora curvata DSM 43183] gi|268311640|gb|ACY98014.1| methylase [Thermomonospora curvata DSM 43183] Length = 223 Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust. Identities = 37/110 (33%), Positives = 55/110 (50%), Gaps = 9/110 (8%) Query: 68 SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 + P+ +T LL ++ L + R R+LDL TGTG V +A + + V Sbjct: 6 PPGVYRPQGDTALLTEA-----LRQAPIRPGARVLDLCTGTGVVAMAAARAG-ARQVVAT 59 Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIE 176 D+S +A+ A+ NA G+ R L+ D V G FDVI +NPPY+ Sbjct: 60 DVSVRAVLAARLNARLRGLPIRV--LRGDLVEPVAGKHFDVITANPPYVP 107 >gi|240948849|ref|ZP_04753205.1| hypothetical protein AM305_08109 [Actinobacillus minor NM305] gi|240296664|gb|EER47275.1| hypothetical protein AM305_08109 [Actinobacillus minor NM305] Length = 233 Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust. Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 2/80 (2%) Query: 97 DVVRILDLGTGTGAVCLAL-LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155 +V RILD+GTG+G + L L + + + +++ A + A N + + R + Sbjct: 38 NVQRILDMGTGSGLIALMLGQRTEERCQIMALELEENAYQQAVENVKNSAWTARIKVIHG 97 Query: 156 DWF-SSVEGLFDVIVSNPPY 174 D +S FD+IVSNPPY Sbjct: 98 DVMNTSFLEKFDLIVSNPPY 117 >gi|119472218|ref|ZP_01614397.1| putative ribosomal RNA small subunit methyltransferase C [Alteromonadales bacterium TW-7] gi|119445036|gb|EAW26331.1| putative ribosomal RNA small subunit methyltransferase C [Alteromonadales bacterium TW-7] Length = 341 Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust. Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 2/82 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LD G G G + L ++ + V D+S A NGV+ + + SD Sbjct: 206 KVLDFGCGAGLIATFLGLKNTALEFVCSDVSALATYATTQTLKLNGVTG--EAILSDGLK 263 Query: 160 SVEGLFDVIVSNPPYIESVIVD 181 ++ G FD+IVSNPP+ + D Sbjct: 264 NISGKFDLIVSNPPFHTGIATD 285 >gi|326381335|ref|ZP_08203029.1| methyltransferase [Gordonia neofelifaecis NRRL B-59395] gi|326199582|gb|EGD56762.1| methyltransferase [Gordonia neofelifaecis NRRL B-59395] Length = 231 Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust. Identities = 31/98 (31%), Positives = 44/98 (44%), Gaps = 8/98 (8%) Query: 92 RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS--CKALEIAKSNAVTNGVSER 149 R+ R R+LD+GTGTG + L + E P +GVD K++ G S R Sbjct: 53 RLALRTDDRVLDIGTGTGELALRIAVEHPDVHVIGVDPDPLALRRARRKAHRRGAGDSTR 112 Query: 150 FDTLQSDWFSSVEGLFDVIVSN------PPYIESVIVD 181 FD D +G FD +VS PP + ++D Sbjct: 113 FDLGYGDRLDYADGSFDCVVSAFAYHHLPPEAQHALLD 150 >gi|312137231|ref|YP_004004568.1| methylase [Methanothermus fervidus DSM 2088] gi|311224950|gb|ADP77806.1| methylase [Methanothermus fervidus DSM 2088] Length = 195 Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust. Identities = 40/143 (27%), Positives = 64/143 (44%), Gaps = 22/143 (15%) Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184 V DI+ A++ AK NA N V + L+ + F + F+ I+ NPPY+ + L Sbjct: 59 VATDINPYAIQCAKKNAQINSV-KNIKFLEGNLFEPINEKFNTILFNPPYLPTEDFKELK 117 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG----LCSVEIGYNQKVDV----- 235 E+ ++ DGG +G V ++L DG + S N+ +D+ Sbjct: 118 DEL-----CLAWDGGSNGRKIIDRFLKEVDKYLKPDGKIQLVQSSLSNPNKTIDILERKG 172 Query: 236 --VRIFESRKLF-----LVNAFK 251 V I S+KLF ++ AFK Sbjct: 173 FEVEITASKKLFFEELLVITAFK 195 >gi|159039802|ref|YP_001539055.1| methyltransferase small [Salinispora arenicola CNS-205] gi|157918637|gb|ABW00065.1| methyltransferase small [Salinispora arenicola CNS-205] Length = 201 Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust. Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 1/74 (1%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LDLG G G + L +P VD++ +A E+ NA G + R ++ D + Sbjct: 64 QLLDLGCGFGPITCVLATSAPSATVWAVDVNARARELTTVNAARVGAAGRVRVVEPDAVA 123 Query: 160 SVEGLFDVIVSNPP 173 + FD I SNPP Sbjct: 124 AAV-TFDQIWSNPP 136 >gi|197120676|ref|YP_002132627.1| ribosomal protein L11 methyltransferase [Anaeromyxobacter sp. K] gi|220915388|ref|YP_002490692.1| ribosomal protein L11 methyltransferase [Anaeromyxobacter dehalogenans 2CP-1] gi|196170525|gb|ACG71498.1| ribosomal protein L11 methyltransferase [Anaeromyxobacter sp. K] gi|219953242|gb|ACL63626.1| ribosomal protein L11 methyltransferase [Anaeromyxobacter dehalogenans 2CP-1] Length = 287 Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust. Identities = 27/79 (34%), Positives = 41/79 (51%), Gaps = 3/79 (3%) Query: 93 IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152 + R +LD+GTG+G + +A K + G D A+ +A+ NA NGV E Sbjct: 144 LAARPGASVLDVGTGSGLLAIAARKLG-AGRVTGNDNDPVAVAVARENAARNGVPEV--A 200 Query: 153 LQSDWFSSVEGLFDVIVSN 171 L D ++ G FDV+V+N Sbjct: 201 LTEDALPAIGGAFDVVVAN 219 >gi|114326872|ref|YP_744029.1| ribosomal protein L11 methyltransferase [Granulibacter bethesdensis CGDNIH1] gi|114315046|gb|ABI61106.1| ribosomal protein L11 methyltransferase [Granulibacter bethesdensis CGDNIH1] Length = 308 Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust. Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 8/79 (10%) Query: 100 RILDLGTGTGAVCLA---LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 R++DLGTG+G + +A L+K P + + DI ++ A+ NAV N VS + D L SD Sbjct: 155 RVIDLGTGSGILAMAAARLIKPHPV-RVMAADIEPWSVRTAQQNAVLNRVSRQLDCLVSD 213 Query: 157 WFS----SVEGLFDVIVSN 171 + +D+I +N Sbjct: 214 GWKRRPIRARAPYDLIFAN 232 >gi|26990482|ref|NP_745907.1| hypothetical protein PP_3777 [Pseudomonas putida KT2440] gi|24985456|gb|AAN69371.1|AE016574_3 conserved hypothetical protein [Pseudomonas putida KT2440] Length = 279 Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust. Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 4/78 (5%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 R LD+GTG+G L LL++ DIS A++ A++N + N + +Q D F Sbjct: 60 ARFLDVGTGSGVHAL-LLRQLGMRHITACDISVDAVQAARANELVNLGESCIEFVQGDLF 118 Query: 159 SSV---EGLFDVIVSNPP 173 ++ E +DVI+ NPP Sbjct: 119 DAMPAAEDGYDVILFNPP 136 >gi|251794055|ref|YP_003008786.1| methyltransferase small [Paenibacillus sp. JDR-2] gi|247541681|gb|ACS98699.1| methyltransferase small [Paenibacillus sp. JDR-2] Length = 231 Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust. Identities = 28/98 (28%), Positives = 48/98 (48%), Gaps = 7/98 (7%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 +D+ L I KR RILDL TG G + + LL + V+I + ++A+ + Sbjct: 34 LDAVLLSKFATIPKRG--RILDLCTGNGVIPM-LLTTRTDARIDAVEIQPRLADMARRSV 90 Query: 142 VTNGVSERFDTLQSD----WFSSVEGLFDVIVSNPPYI 175 N +SE+ ++ D + G++D + NPPY+ Sbjct: 91 AMNNLSEQVSIIEGDLKIFMKEAGNGIYDAVTVNPPYM 128 >gi|238753930|ref|ZP_04615290.1| Methyltransferase small [Yersinia ruckeri ATCC 29473] gi|238707918|gb|EEQ00276.1| Methyltransferase small [Yersinia ruckeri ATCC 29473] Length = 259 Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust. Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 4/85 (4%) Query: 100 RILDLGTGTGAVCLALL-KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD-- 156 R+LD+G G+G + L + + SP + GV++ A A NA + +R +D Sbjct: 61 RVLDIGCGSGLIALMIAQRSSPQVQIDGVELENDAAAQASENAQASPWRDRIQIYATDVH 120 Query: 157 -WFSSVEGLFDVIVSNPPYIESVIV 180 + + +D+IVSNPPY + Sbjct: 121 EFAKTHVHQYDLIVSNPPYFAPAVA 145 >gi|315641380|ref|ZP_07896455.1| type I restriction-modification system DNA-methyltransferase [Enterococcus italicus DSM 15952] gi|315482873|gb|EFU73394.1| type I restriction-modification system DNA-methyltransferase [Enterococcus italicus DSM 15952] Length = 535 Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust. Identities = 34/140 (24%), Positives = 61/140 (43%), Gaps = 17/140 (12%) Query: 68 SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK---ESPFFKG 124 + + + P+P +EL+ A+ E + + D G+G++ L + + E F Sbjct: 194 AGEFYTPQPISELMTRIAIDGK----EDQKGFSVYDPTMGSGSLLLNVRRFSNEKGFINY 249 Query: 125 VGVDISCKALEIAKSNAVTNGVSE------RFDTLQSDWFSSVEGLFDVIVSNPPYIESV 178 G +++ +A+ N + +GV DTL DW + FD ++ NPPY Sbjct: 250 FGQELNTSTFNLARMNMILHGVDSANQHLRNGDTLDGDWPTEEPTNFDAVLMNPPYSAKW 309 Query: 179 IVDCLGLEVRDFDPRISLDG 198 + L+ DPR S+ G Sbjct: 310 SGEKGFLD----DPRFSMYG 325 >gi|311086067|gb|ADP66149.1| 16S rRNA m(2)G 1207 methyltransferase [Buchnera aphidicola str. LL01 (Acyrthosiphon pisum)] Length = 280 Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust. Identities = 28/93 (30%), Positives = 48/93 (51%), Gaps = 2/93 (2%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 +DS R ++LD+G GTG + +LL SP VD + AL+ ++ Sbjct: 124 IDSGSKLLASTFSNRITGKVLDIGCGTGFLSASLLYFSPDAILTLVDNNMYALKCSQYTL 183 Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174 +N + + + S+ +S+V FD+I+SNPP+ Sbjct: 184 NSNKFNGK--IVYSNLYSNVFKKFDLIISNPPF 214 >gi|315604446|ref|ZP_07879512.1| 16S rRNA methyltransferase [Actinomyces sp. oral taxon 180 str. F0310] gi|315314152|gb|EFU62203.1| 16S rRNA methyltransferase [Actinomyces sp. oral taxon 180 str. F0310] Length = 204 Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust. Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 7/78 (8%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS-----ERFDTLQS 155 +LDLG G G + + E+P + VD++ +A+++ NA NG S + + L Sbjct: 63 LLDLGCGWGPLATVMSLEAPRCEVWAVDVNSRAVDLTARNAAANGASGVRALKACEALAE 122 Query: 156 DWFSSVEGLFDVIVSNPP 173 S+ FDVI SNPP Sbjct: 123 SVRSAT--FFDVIWSNPP 138 >gi|206577582|ref|YP_002237081.1| putative methyltransferase [Klebsiella pneumoniae 342] gi|262828515|sp|B5XNG1|TRMN6_KLEP3 RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName: Full=tRNA m6A37 methyltransferase gi|206566640|gb|ACI08416.1| putative methyltransferase [Klebsiella pneumoniae 342] Length = 245 Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust. Identities = 25/82 (30%), Positives = 44/82 (53%), Gaps = 4/82 (4%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 V +LD+G G+G + L L + + V V++ +A A+ NA+ + S R + Q+D Sbjct: 45 VKHVLDIGAGSGLLALMLAQRTDHDVQVDAVELDEEAAAQARENALASPWSSRIEVCQAD 104 Query: 157 ---WFSSVEGLFDVIVSNPPYI 175 W S +++I+SNPP+ Sbjct: 105 IHQWQPSQTRRYELIISNPPFF 126 >gi|323492022|ref|ZP_08097187.1| ribosomal RNA small subunit methyltransferase C [Vibrio brasiliensis LMG 20546] gi|323313751|gb|EGA66850.1| ribosomal RNA small subunit methyltransferase C [Vibrio brasiliensis LMG 20546] Length = 340 Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust. Identities = 33/123 (26%), Positives = 55/123 (44%), Gaps = 11/123 (8%) Query: 57 WRDFYNVRLTLSSDTFEPRP----ETELLVDSALAF-SLPRIEKRDVVRILDLGTGTGAV 111 W Y V S+ T + P E + S L +LP ++ + +LD G G G + Sbjct: 159 WYKTYQVSYKESTLTIKSLPGVFSHGEFDIGSKLLLDTLPELKGK----VLDFGCGAGVI 214 Query: 112 CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSN 171 + +P + DIS A+ +++ NG++ R SD +S +D I+SN Sbjct: 215 GSVMALLNPTIELEMCDISALAVASSQATLAANGLTGR--VFASDVYSDTSKDYDYIISN 272 Query: 172 PPY 174 PP+ Sbjct: 273 PPF 275 >gi|262831299|sp|B2RK25|TRMN6_PORG3 RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName: Full=tRNA m6A37 methyltransferase Length = 255 Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust. Identities = 33/82 (40%), Positives = 47/82 (57%), Gaps = 6/82 (7%) Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF-SS 160 LD+GTGTG + L L + P + G++I A E A++NA + S+R D SS Sbjct: 46 LDIGTGTGLIALMLAQRFPQARVQGIEIDPIAAECARANAAASPFSDRIVIASGDILDSS 105 Query: 161 VEGL-----FDVIVSNPPYIES 177 +E L FD+IVSNPP+ +S Sbjct: 106 LESLIGNQRFDLIVSNPPFFKS 127 >gi|188995065|ref|YP_001929317.1| hypothetical protein PGN_1201 [Porphyromonas gingivalis ATCC 33277] gi|188594745|dbj|BAG33720.1| conserved hypothetical protein [Porphyromonas gingivalis ATCC 33277] Length = 236 Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust. Identities = 33/82 (40%), Positives = 47/82 (57%), Gaps = 6/82 (7%) Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF-SS 160 LD+GTGTG + L L + P + G++I A E A++NA + S+R D SS Sbjct: 27 LDIGTGTGLIALMLAQRFPQARVQGIEIDPIAAECARANAAASPFSDRIVIASGDILDSS 86 Query: 161 VEGL-----FDVIVSNPPYIES 177 +E L FD+IVSNPP+ +S Sbjct: 87 LESLIGNQRFDLIVSNPPFFKS 108 >gi|320174522|gb|EFW49658.1| putative enzyme [Shigella dysenteriae CDC 74-1112] Length = 378 Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust. Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 4/91 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS--ERFDTLQSDWF 158 I+DLG G G + L LL ++P K V VD S A+ ++ N TN +R + + ++ Sbjct: 232 IVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVAFSRLNVETNMPEALDRSEFMINNAL 291 Query: 159 SSVEGL-FDVIVSNPPYIES-VIVDCLGLEV 187 S VE F+ ++ NPP+ + + D + E+ Sbjct: 292 SGVEPFRFNAVLCNPPFHQQHALTDNVAWEM 322 >gi|320164607|gb|EFW41506.1| cyclopropane-fatty-acyl-phospholipid synthase [Capsaspora owczarzaki ATCC 30864] Length = 444 Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust. Identities = 36/145 (24%), Positives = 67/145 (46%), Gaps = 11/145 (7%) Query: 35 RFFLTNAIVRSLKHESIHRILGWRDFYNVRL------TLSSDTFEPRPETELLVDSALAF 88 R+ +TN+ SL + H LG DFY + L + P+ E + + Sbjct: 134 RWLMTNSPSLSLANVQAHYDLG-NDFYQLWLDKDFMAYTCALYLTPKDTLEKAQANKIHL 192 Query: 89 SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148 + +++ + R+LDLG G G + L ++ + + V++S + +E A+ A G+S Sbjct: 193 IIKKLQLKQTDRLLDLGCGWGGLALEAARKVG-CRVLAVNLSKEQIEFARKQAAKEGLSH 251 Query: 149 RFDTLQSDWFS---SVEGLFDVIVS 170 + +D+ + +GLFD I S Sbjct: 252 LCEFRHADYRTINPEADGLFDKISS 276 >gi|315179239|gb|ADT86153.1| methyltransferase [Vibrio furnissii NCTC 11218] Length = 239 Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust. Identities = 24/76 (31%), Positives = 33/76 (43%), Gaps = 1/76 (1%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF- 158 ILD+GTGTG + L + P VDI A A N + + R Q + Sbjct: 45 HILDIGTGTGLLALMCAQRFPQASITAVDIDEHAFHAASHNVAHSSWANRIQVAQQNILQ 104 Query: 159 SSVEGLFDVIVSNPPY 174 + + D I+ NPPY Sbjct: 105 TQLNTPVDAIICNPPY 120 >gi|313904109|ref|ZP_07837489.1| type I restriction-modification system, M subunit [Eubacterium cellulosolvens 6] gi|313471258|gb|EFR66580.1| type I restriction-modification system, M subunit [Eubacterium cellulosolvens 6] Length = 531 Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust. Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 9/90 (10%) Query: 94 EKRDVVRILDLGTGTGAV---CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150 E + +++ D G+G++ C E F K G ++ +A+ N +G+ Sbjct: 214 ENKKGLQVYDPCMGSGSLMLSCKNYSTEPDFIKYYGQELMPSTYNLARMNMFLHGILPEN 273 Query: 151 ------DTLQSDWFSSVEGLFDVIVSNPPY 174 DTL +DW + E FDV+ NPPY Sbjct: 274 QHLRNGDTLDADWPTDEETEFDVVTMNPPY 303 >gi|269468793|gb|EEZ80397.1| 16S RNA G1207 methylase RsmC [uncultured SUP05 cluster bacterium] Length = 196 Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust. Identities = 33/104 (31%), Positives = 50/104 (48%), Gaps = 8/104 (7%) Query: 72 FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131 F PR +D L ++ ++ + LDLG G G + LA+ K P + VD Sbjct: 34 FSPRA-----IDEGTQLFLKHVDIQESDKCLDLGCGYGPIGLAVAKSCPRGEVHMVDKDF 88 Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPP 173 A+E++ +NA N + L SD FS+V FD ++SN P Sbjct: 89 IAVELSNTNAKLNNTNNAQAYL-SDAFSAVGKTDYFDQVLSNVP 131 >gi|268326391|emb|CBH39979.1| conserved hypothetical membrane protein, methyltransferase family [uncultured archaeon] Length = 257 Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust. Identities = 29/78 (37%), Positives = 42/78 (53%), Gaps = 6/78 (7%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKA----LEIAKSNAVTNGVSER--FDTL 153 + LD+GTG+GA + + K+ K G+D KA L++ ++NA T GV ER F Sbjct: 90 KALDIGTGSGACAIKVAKKFRNSKVTGIDYWGKAWNYSLKVCENNAATEGVGERTNFQKA 149 Query: 154 QSDWFSSVEGLFDVIVSN 171 + +G FDV VSN Sbjct: 150 SAADLPFDDGEFDVAVSN 167 >gi|149190657|ref|ZP_01868925.1| ribosomal protein L11 methyltransferase [Vibrio shilonii AK1] gi|148835540|gb|EDL52509.1| ribosomal protein L11 methyltransferase [Vibrio shilonii AK1] Length = 293 Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust. Identities = 34/112 (30%), Positives = 57/112 (50%), Gaps = 17/112 (15%) Query: 74 PRPET-ELLVDSALAFS----------LPRIEKRDVV--RILDLGTGTGAVCLALLKESP 120 P P+ +++D LAF L +E D+ ++D G G+G + +A +K Sbjct: 123 PEPDAVNVMLDPGLAFGTGTHPTTALCLEWLESLDLAGKTVIDFGCGSGILAIAAIKLG- 181 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF-DVIVSN 171 K +G+DI +AL +K NA NGV+++ + + EGL DV+V+N Sbjct: 182 AAKVIGIDIDPQALTASKDNAERNGVADQLELFLPQ--NQPEGLIADVVVAN 231 >gi|154250324|ref|YP_001411149.1| ribosomal L11 methyltransferase [Fervidobacterium nodosum Rt17-B1] gi|154154260|gb|ABS61492.1| ribosomal L11 methyltransferase [Fervidobacterium nodosum Rt17-B1] Length = 247 Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust. Identities = 32/83 (38%), Positives = 48/83 (57%), Gaps = 5/83 (6%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LDLG G+G + + L K+ + + VD A+E+A NA N V + SD FS+ Sbjct: 123 VLDLGCGSGILGI-LAKKLGANRVLAVDNDPLAVEVAMENAERNKVD--IEVRLSDLFSN 179 Query: 161 VEGLFDVIVSNPPYIESVIVDCL 183 V+G FD+IVSN I ++V+ L Sbjct: 180 VDGKFDIIVSN--IIAEILVEML 200 >gi|284037300|ref|YP_003387230.1| methyltransferase small [Spirosoma linguale DSM 74] gi|283816593|gb|ADB38431.1| methyltransferase small [Spirosoma linguale DSM 74] Length = 248 Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust. Identities = 23/80 (28%), Positives = 42/80 (52%), Gaps = 5/80 (6%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS-- 155 V+ +LD+GTGTG + L + + +P V++ A A N + + R +QS Sbjct: 40 VINLLDIGTGTGLLALMVAQRNPMASIDAVEVDDAAYSQAIQNVGASPFANRIQVMQSRI 99 Query: 156 -DWFSSVEGLFDVIVSNPPY 174 D+ ++ +D I++NPP+ Sbjct: 100 QDYRPAIR--YDRILTNPPF 117 >gi|163753132|ref|ZP_02160256.1| putative RNA methyltransferase [Kordia algicida OT-1] gi|161326864|gb|EDP98189.1| putative RNA methyltransferase [Kordia algicida OT-1] Length = 237 Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust. Identities = 37/149 (24%), Positives = 63/149 (42%), Gaps = 14/149 (9%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS---DW 157 ILD+G GTG + L L + ++I A E A N + S+R + ++ Sbjct: 41 ILDIGAGTGLIALQLAQRCHAEVIDAIEIDAAAYEQAVDNFENSPWSDRLFCYHAGLDEF 100 Query: 158 FSSVEGLFDVIVSNPP-YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216 +E +D+IVSNPP Y E+ + + F D L + + GV++ Sbjct: 101 VDEIEDTYDLIVSNPPFYTENYKTESAQRDTARF---------TDALP-FSALLSGVAKL 150 Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRKLF 245 L G I + + + + ++ KLF Sbjct: 151 LAPTGTFHTIIPFKEHEHFINLAKANKLF 179 >gi|119585530|gb|EAW65126.1| HemK methyltransferase family member 1, isoform CRA_b [Homo sapiens] Length = 129 Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust. Identities = 32/95 (33%), Positives = 47/95 (49%), Gaps = 3/95 (3%) Query: 50 SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPR---IEKRDVVRILDLGT 106 + ILG DF + L + F PRPETE LV+ L R + IL++G Sbjct: 2 PVQYILGEWDFQGLSLRMVPPVFIPRPETEELVEWVLEEVAQRSHAVGSPGSPLILEVGC 61 Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 G+GA+ L+LL + P + + VD A+ + NA Sbjct: 62 GSGAISLSLLSQLPQSRVIAVDKREAAISLTHENA 96 >gi|71906159|ref|YP_283746.1| methyltransferase small [Dechloromonas aromatica RCB] gi|71845780|gb|AAZ45276.1| Methyltransferase small [Dechloromonas aromatica RCB] Length = 384 Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust. Identities = 33/110 (30%), Positives = 55/110 (50%), Gaps = 6/110 (5%) Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162 D+GTG+G + A+L + V D +AL A N G++ +++D F E Sbjct: 211 DIGTGSG-IIAAVLARRGVAQIVATDQDARALACAGENIEQLGLAAAVRIVKADLFP--E 267 Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212 G ++V NPP++ + + V D D R+ L G + GL+ + +ADG Sbjct: 268 GKAPLVVCNPPWLPAQPTSPVEYAVYDPDSRM-LRGFLAGLAAH--LADG 314 >gi|289577354|ref|YP_003475981.1| methyltransferase small [Thermoanaerobacter italicus Ab9] gi|289527067|gb|ADD01419.1| methyltransferase small [Thermoanaerobacter italicus Ab9] Length = 248 Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust. Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 4/80 (5%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 +I+DLG GTG + + + ++ GV+I ++A + V N + +R +Q D Sbjct: 45 KIVDLGCGTGIIPILIAAKTYDTFIYGVEIQEDMADMATRSVVINNMEKRIKIIQGDVRG 104 Query: 160 SVEGL----FDVIVSNPPYI 175 + L FD++ SNPPY+ Sbjct: 105 IEKTLGYEKFDIVTSNPPYM 124 >gi|118581364|ref|YP_902614.1| ribosomal protein L11 methyltransferase [Pelobacter propionicus DSM 2379] gi|166223426|sp|A1AT86|PRMA_PELPD RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11 Mtase gi|118504074|gb|ABL00557.1| [LSU ribosomal protein L11P]-lysine N-methyltransferase [Pelobacter propionicus DSM 2379] Length = 309 Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust. Identities = 23/71 (32%), Positives = 44/71 (61%), Gaps = 2/71 (2%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LDLGTG+G + +A ++ + V VDI +A+E+A+ N N ++++ + + + Sbjct: 174 VLDLGTGSGILAMAAVRLG-AGRVVAVDIDPQAVEVARENLALNDLTDQVEC-DTTPLEA 231 Query: 161 VEGLFDVIVSN 171 + G FDVI++N Sbjct: 232 LPGTFDVILAN 242 >gi|34540837|ref|NP_905316.1| hypothetical protein PG1104 [Porphyromonas gingivalis W83] gi|81833778|sp|Q7MVG0|TRMN6_PORGI RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName: Full=tRNA m6A37 methyltransferase gi|34397151|gb|AAQ66215.1| conserved hypothetical protein [Porphyromonas gingivalis W83] Length = 255 Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust. Identities = 33/82 (40%), Positives = 47/82 (57%), Gaps = 6/82 (7%) Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF-SS 160 LD+GTGTG + L L + P + G++I A E A++NA + S+R D SS Sbjct: 46 LDIGTGTGLIALMLAQRFPQARVQGIEIDPIAAECARANAAASPFSDRIVIASGDILDSS 105 Query: 161 VEGL-----FDVIVSNPPYIES 177 +E L FD+IVSNPP+ +S Sbjct: 106 LESLIGNQRFDLIVSNPPFFKS 127 >gi|296171937|ref|ZP_06852982.1| thiopurine S-methyltransferase (tpmt) superfamily protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295893870|gb|EFG73642.1| thiopurine S-methyltransferase (tpmt) superfamily protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 249 Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust. Identities = 25/69 (36%), Positives = 35/69 (50%), Gaps = 2/69 (2%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LD GTG G A+ + + G+D S ALE A+ NA GVS F+ + Sbjct: 53 VLDPGTGPG--HHAIYYAAKGYSATGIDGSPGALERARENARRAGVSVNFELADATRLEG 110 Query: 161 VEGLFDVIV 169 +EG FD +V Sbjct: 111 LEGRFDTVV 119 >gi|227328588|ref|ZP_03832612.1| hypothetical protein PcarcW_15134 [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 248 Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust. Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 4/81 (4%) Query: 98 VVRILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 RILD+G+G+G + L L + S P + V++ A + AK N + ++R D Sbjct: 48 ATRILDIGSGSGLLALMLAQRSEPRVQIDAVELDRAASDQAKENVAASPWADRITVYAED 107 Query: 157 WFSSVE---GLFDVIVSNPPY 174 S E + +I+SNPPY Sbjct: 108 IVSFAETRAADYSLIISNPPY 128 >gi|91977843|ref|YP_570502.1| ribosomal L11 methyltransferase [Rhodopseudomonas palustris BisB5] gi|123357306|sp|Q133Y8|PRMA_RHOPS RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11 Mtase gi|91684299|gb|ABE40601.1| LSU ribosomal protein L11P methyltransferase [Rhodopseudomonas palustris BisB5] Length = 295 Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust. Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 9/77 (11%) Query: 101 ILDLGTGTGAVCLALLK--ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 +LDLGTGTG + +A K P DI +++ +AK NA NGV + + + F Sbjct: 157 VLDLGTGTGVLAIAAAKALRQPVL---ATDIDRQSVAVAKENARLNGVGNLVEAVHATGF 213 Query: 159 S----SVEGLFDVIVSN 171 S + G FD++++N Sbjct: 214 SAPVFAAWGPFDLVLAN 230 >gi|86141701|ref|ZP_01060225.1| hypothetical protein MED217_01180 [Leeuwenhoekiella blandensis MED217] gi|85831264|gb|EAQ49720.1| hypothetical protein MED217_01180 [Leeuwenhoekiella blandensis MED217] Length = 222 Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust. Identities = 36/154 (23%), Positives = 63/154 (40%), Gaps = 21/154 (13%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF-- 158 ILD+GTGTG + L L + +++ A E A N + +R + + Sbjct: 23 ILDIGTGTGVIALMLAQRCDAELVDALELDEDAYEQAVDNFEASPWGDRLFCYHAHLYEF 82 Query: 159 -SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT------IAD 211 + +E +D+I NPP+ E P+ G + + + Sbjct: 83 ATEIEDTYDLITCNPPFFEGNA------------PQAEQQGSAREQARFEESMPFELLVA 130 Query: 212 GVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245 V++ LN DG+ SV I YN++ + + + LF Sbjct: 131 SVNQLLNPDGIFSVVIPYNREQEFIDLAARGNLF 164 >gi|332280097|ref|ZP_08392510.1| conserved hypothetical protein [Shigella sp. D9] gi|332102449|gb|EGJ05795.1| conserved hypothetical protein [Shigella sp. D9] Length = 414 Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust. Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 4/91 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS--ERFDTLQSDWF 158 I+DLG G G + L LL ++P K V VD S A+ ++ N TN +R + + ++ Sbjct: 268 IVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRMNVETNMPEALDRCEFMINNAL 327 Query: 159 SSVEGL-FDVIVSNPPYIES-VIVDCLGLEV 187 S VE F+ ++ NPP+ + + D + E+ Sbjct: 328 SGVEPFRFNAVLCNPPFHQQHALTDNVAWEM 358 >gi|312963653|ref|ZP_07778134.1| SAM-dependent methyltransferase [Pseudomonas fluorescens WH6] gi|311282162|gb|EFQ60762.1| SAM-dependent methyltransferase [Pseudomonas fluorescens WH6] Length = 398 Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust. Identities = 43/142 (30%), Positives = 66/142 (46%), Gaps = 35/142 (24%) Query: 100 RILDLGT--GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 R+LDL + G V A S F VD S AL+ + NA NGV+E+ ++ D Sbjct: 223 RVLDLYSYIGGWGVQAAAFGASEVF---CVDASAFALDGVERNAALNGVAEKMTCIEGDV 279 Query: 158 FSSVEGL------FDVIVSNPP-YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210 F +++ L FDVIV++PP +I+ R D + +G YR + Sbjct: 280 FEALKELKASEERFDVIVADPPAFIK-----------RKKDMK-------NGEGAYRRLN 321 Query: 211 DGVSRHLNKDGL-----CSVEI 227 + R L+KDG+ CS+ + Sbjct: 322 EQAMRLLSKDGILVSASCSMHL 343 >gi|138893706|ref|YP_001124159.1| methyltransferase [Geobacillus thermodenitrificans NG80-2] gi|196250749|ref|ZP_03149436.1| methyltransferase small [Geobacillus sp. G11MC16] gi|134265219|gb|ABO65414.1| Methyltransferase [Geobacillus thermodenitrificans NG80-2] gi|196209699|gb|EDY04471.1| methyltransferase small [Geobacillus sp. G11MC16] Length = 249 Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust. Identities = 25/90 (27%), Positives = 48/90 (53%), Gaps = 9/90 (10%) Query: 100 RILDLGTGTGAVCLALLKESPFFKG--VGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 +I+DL TG G + L L + + KG +G++I + ++A+ + NG+ E+ + + D Sbjct: 48 QIVDLCTGNGVIPLLLSQRT---KGTIIGIEIQERLCDMARRSIQYNGLEEQIEIIHGDI 104 Query: 158 FSSVEGL----FDVIVSNPPYIESVIVDCL 183 + + + +DV+ NPPY + D L Sbjct: 105 KEAPQQIGYSRYDVVTCNPPYFPTAGQDEL 134 >gi|116753598|ref|YP_842716.1| putative methylase [Methanosaeta thermophila PT] gi|116665049|gb|ABK14076.1| putative methylase [Methanosaeta thermophila PT] Length = 185 Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust. Identities = 43/179 (24%), Positives = 78/179 (43%), Gaps = 23/179 (12%) Query: 70 DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129 D + P +T LL+ +A++ E ++++G G+G + +L+ + + DI Sbjct: 3 DVYPPSEDTYLLMRAAIS------EASAGDSVIEIGCGSGVISASLIGKVRSI--LATDI 54 Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRD 189 + A+ A S + +++D F + FD+I+ NPPY+ + GL++ Sbjct: 55 NPHAVRAAASLGIP--------AVRADLFHGINSKFDLILFNPPYLPTED----GLDLNP 102 Query: 190 FDPR---ISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245 D R +LDGG DG GV ++ G + I +D V+ R F Sbjct: 103 EDDRWLSTALDGGADGREVIERFLKGVKNIMSPRGRLLLLISSLTGLDEVQELARRSGF 161 >gi|268318254|ref|YP_003291973.1| Methyltransferase type 11 [Rhodothermus marinus DSM 4252] gi|262335788|gb|ACY49585.1| Methyltransferase type 11 [Rhodothermus marinus DSM 4252] Length = 274 Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust. Identities = 26/73 (35%), Positives = 35/73 (47%), Gaps = 1/73 (1%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 VR+LD GTG G + + P + VGVD+ LE A+ V+ R Q D Sbjct: 55 VRVLDAGTGFGQYAYYIARRYPRAEVVGVDLKTDYLEQARRFVARTPVAGRVRFAQDDLT 114 Query: 159 S-SVEGLFDVIVS 170 EG FD+I+S Sbjct: 115 RLQTEGPFDLILS 127 >gi|229593165|ref|YP_002875284.1| hypothetical protein PFLU5795 [Pseudomonas fluorescens SBW25] gi|229365031|emb|CAY53198.1| conserved hypothetical protein [Pseudomonas fluorescens SBW25] Length = 398 Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust. Identities = 43/142 (30%), Positives = 66/142 (46%), Gaps = 35/142 (24%) Query: 100 RILDLGT--GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 R+LDL + G V A S F VD S AL+ + NA NGV+E+ ++ D Sbjct: 223 RVLDLYSYIGGWGVQAAAFGASEVF---CVDASAFALDGVERNAALNGVAEKMTCIEGDV 279 Query: 158 FSSVEGL------FDVIVSNPP-YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210 F +++ L FDVIV++PP +I+ R D + +G YR + Sbjct: 280 FEALKELKASEERFDVIVADPPAFIK-----------RKKDMK-------NGEGAYRRLN 321 Query: 211 DGVSRHLNKDGL-----CSVEI 227 + R L+KDG+ CS+ + Sbjct: 322 EQAMRLLSKDGILVSASCSMHL 343 >gi|239918671|ref|YP_002958229.1| ubiquinone/menaquinone biosynthesis methyltransferase [Micrococcus luteus NCTC 2665] gi|281415112|ref|ZP_06246854.1| ubiquinone/menaquinone biosynthesis methyltransferase [Micrococcus luteus NCTC 2665] gi|239839878|gb|ACS31675.1| ubiquinone/menaquinone biosynthesis methyltransferase [Micrococcus luteus NCTC 2665] Length = 247 Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust. Identities = 17/43 (39%), Positives = 28/43 (65%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 R+LDL TGTG + +LK+ P + VG DI+ + +E+ ++ A Sbjct: 64 ARVLDLATGTGDLAFEVLKQHPDAQVVGADIAAEMMEVGRARA 106 >gi|313888904|ref|ZP_07822564.1| ribosomal protein L11 methyltransferase [Peptoniphilus harei ACS-146-V-Sch2b] gi|312845077|gb|EFR32478.1| ribosomal protein L11 methyltransferase [Peptoniphilus harei ACS-146-V-Sch2b] Length = 301 Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust. Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 4/92 (4%) Query: 90 LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 L R K+D I D+G G+G + +A LK + + VDI K ++ + NA N + ++ Sbjct: 157 LERYVKKDD-EIFDIGCGSGILAIAGLKLGAK-RALAVDIDDKCIDASHENADLNNLEDK 214 Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181 D + + V+G D+IVSN I +IVD Sbjct: 215 MDIKKGNLLDVVKGRADLIVSN--IIAEIIVD 244 >gi|283781143|ref|YP_003371898.1| O-methyltransferase family 2 [Pirellula staleyi DSM 6068] gi|283439596|gb|ADB18038.1| O-methyltransferase family 2 [Pirellula staleyi DSM 6068] Length = 352 Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust. Identities = 25/73 (34%), Positives = 43/73 (58%), Gaps = 3/73 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LDLG GTG +ALL++ P + + +D + L+++ A GV++R + L D FS+ Sbjct: 187 LLDLGGGTGIYSIALLRKYPQLRAIVLD-RPEVLKVSHEFAEQYGVADRLELLAGDMFSA 245 Query: 161 V--EGLFDVIVSN 171 G+ V++SN Sbjct: 246 ALPAGVDRVLLSN 258 >gi|261250290|ref|ZP_05942866.1| ribosomal RNA small subunit methyltransferase C [Vibrio orientalis CIP 102891] gi|260939406|gb|EEX95392.1| ribosomal RNA small subunit methyltransferase C [Vibrio orientalis CIP 102891] Length = 340 Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust. Identities = 35/123 (28%), Positives = 54/123 (43%), Gaps = 11/123 (8%) Query: 57 WRDFYNVRLTLSSDTFEPRP----ETELLVDSALAF-SLPRIEKRDVVRILDLGTGTGAV 111 W Y V +S T + P E + S L +LP + + +LD G G G + Sbjct: 159 WFKSYQVSYKETSLTIKSLPGVFSHGEFDIGSKLLLDTLPALSGK----VLDFGCGAGVI 214 Query: 112 CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSN 171 + +P + DIS A+E +K+ NG+S R SD +S + I+SN Sbjct: 215 GSVMAILNPEIELEMCDISALAVESSKATLAANGLSGR--VFASDIYSDTSNDYHFIISN 272 Query: 172 PPY 174 PP+ Sbjct: 273 PPF 275 >gi|311070753|ref|YP_003975676.1| ribosomal RNA methyltransferase [Bacillus atrophaeus 1942] gi|310871270|gb|ADP34745.1| ribosomal RNA methyltransferase [Bacillus atrophaeus 1942] Length = 201 Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust. Identities = 32/98 (32%), Positives = 51/98 (52%), Gaps = 10/98 (10%) Query: 78 TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137 + LL++S F P E LD+G G G + L+L + +D++ +A+E++ Sbjct: 46 SRLLIES---FEEPEAEGD----FLDVGCGYGPIGLSLASDFKDRTIHMIDVNERAVELS 98 Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPP 173 NA NG+ E QSD FS+V+ F I++NPP Sbjct: 99 NENAEHNGI-ENVRIYQSDLFSNVDSAQTFASIITNPP 135 >gi|302036312|ref|YP_003796634.1| hypothetical protein NIDE0946 [Candidatus Nitrospira defluvii] gi|300604376|emb|CBK40708.1| conserved protein of unknown function, putative SAM-dependent methyltransferase [Candidatus Nitrospira defluvii] Length = 373 Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust. Identities = 31/108 (28%), Positives = 54/108 (50%), Gaps = 4/108 (3%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 V D+GTGTG V A+L V D +AL A+ N + +R + +Q+D F Sbjct: 196 VLAFDIGTGTG-VLAAVLARRGVSHIVATDQDPRALACARENLARLELIDRVEVVQADLF 254 Query: 159 SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206 EG +++ NPP++ + + + D + R+ L G ++GL+ + Sbjct: 255 P--EGKAPLVLCNPPWVPARPTSPIEQAIYDPECRM-LTGFLNGLAAH 299 >gi|239983770|ref|ZP_04706294.1| putative methyltransferase [Streptomyces albus J1074] gi|291455575|ref|ZP_06594965.1| methyltransferase [Streptomyces albus J1074] gi|291358524|gb|EFE85426.1| methyltransferase [Streptomyces albus J1074] Length = 293 Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust. Identities = 23/58 (39%), Positives = 31/58 (53%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 RILDLG GTGA ALL + P + VD S L A G+++R T+++D Sbjct: 57 TRILDLGCGTGAGTFALLGQFPEARVTAVDTSAAHLRRLDEKARERGLADRVRTVEAD 114 >gi|84683977|ref|ZP_01011879.1| hypothetical protein 1099457000262_RB2654_16051 [Maritimibacter alkaliphilus HTCC2654] gi|84667730|gb|EAQ14198.1| hypothetical protein RB2654_16051 [Rhodobacterales bacterium HTCC2654] Length = 253 Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust. Identities = 33/107 (30%), Positives = 48/107 (44%), Gaps = 8/107 (7%) Query: 72 FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131 +PR VD F + D +LDLG G GA L L P + VGV+ Sbjct: 21 MQPRDGYRAGVDPV--FLAASVAAHDGESVLDLGCGAGAAGLCLATRVPGIRLVGVERQA 78 Query: 132 KALEIAKSNAVTNGVSERFDTLQ---SDWFSSV-EGLFDVIVSNPPY 174 ++A+ N+ N + D ++ SD S V E +D ++ NPPY Sbjct: 79 DYADLARKNSFDNDID--MDVVEADISDLPSEVKEESYDHVIMNPPY 123 >gi|319654859|ref|ZP_08008934.1| hypothetical protein HMPREF1013_05556 [Bacillus sp. 2_A_57_CT2] gi|317393422|gb|EFV74185.1| hypothetical protein HMPREF1013_05556 [Bacillus sp. 2_A_57_CT2] Length = 200 Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust. Identities = 27/74 (36%), Positives = 40/74 (54%), Gaps = 2/74 (2%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 ILD+G G G + L K P VD++ +AL +AK NA NG+ + +SD + Sbjct: 62 ILDVGCGYGPIGLTAAKLMPERTVHMVDVNERALGLAKENAELNGI-KNVQIYESDRLEN 120 Query: 161 VEG-LFDVIVSNPP 173 +G F I++NPP Sbjct: 121 TKGNKFAAILTNPP 134 >gi|315037605|ref|YP_004031173.1| Methyltransferase small [Lactobacillus amylovorus GRL 1112] gi|312275738|gb|ADQ58378.1| Methyltransferase small [Lactobacillus amylovorus GRL 1112] gi|327182901|gb|AEA31348.1| Methyltransferase small [Lactobacillus amylovorus GRL 1118] Length = 206 Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust. Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 3/75 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 ILD+GTG G + L K P VD++ + L +A+ NA N +S D SD ++ Sbjct: 67 ILDVGTGYGPIGLFAAKFWPDQTVDMVDVNERGLNLARQNAKNNHIS-NVDIYTSDCYAQ 125 Query: 161 VEG--LFDVIVSNPP 173 V+ F +I++NPP Sbjct: 126 VDNDKKFGLILTNPP 140 >gi|213024661|ref|ZP_03339108.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 83 Score = 41.6 bits (96), Expect = 0.13, Method: Composition-based stats. Identities = 26/57 (45%), Positives = 37/57 (64%), Gaps = 5/57 (8%) Query: 153 LQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISL---DGGIDGLSH 205 LQS WFS++ G FD+IVSNPPYI++ +VR F+PR +L + G+ L+H Sbjct: 27 LQSCWFSALSGQQFDMIVSNPPYIDAQDPHLSEGDVR-FEPRSALVADENGMADLTH 82 >gi|145636309|ref|ZP_01791978.1| phosphatidylserine synthase [Haemophilus influenzae PittHH] gi|145270474|gb|EDK10408.1| phosphatidylserine synthase [Haemophilus influenzae PittHH] Length = 232 Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust. Identities = 26/84 (30%), Positives = 44/84 (52%), Gaps = 4/84 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD--- 156 ILD+G+GTG + L L + + + V++ A++ A+ N + R +Q+D Sbjct: 39 ILDMGSGTGLLALMLAQRTEENCQIQAVELDPIAVKQAQENINDSVWKNRIQLIQTDIQH 98 Query: 157 WFSSVEGLFDVIVSNPPYIESVIV 180 + + FD+IV+NPPY E I Sbjct: 99 FLQTTAQTFDLIVANPPYFEQGIA 122 >gi|18976623|ref|NP_577980.1| hypothetical protein PF0251 [Pyrococcus furiosus DSM 3638] gi|18892190|gb|AAL80375.1| hypothetical protein PF0251 [Pyrococcus furiosus DSM 3638] Length = 398 Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust. Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 11/82 (13%) Query: 100 RILDLGTGTG--AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 R+LD+ T TG A+ A+ + +D S +A+E AK NA NGV +R + Sbjct: 221 RVLDVFTYTGGFAIHAAIAGAEEV---IAIDKSPRAIETAKENAKLNGVEDRIKFIVGSA 277 Query: 158 FSSVEGL------FDVIVSNPP 173 F +E L FD+++ +PP Sbjct: 278 FEEMEKLQKKGEKFDIVILDPP 299 >gi|51591148|emb|CAH22813.1| ribosomal protein L11 methyltransferase [Yersinia pseudotuberculosis IP 32953] Length = 304 Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust. Identities = 26/72 (36%), Positives = 42/72 (58%), Gaps = 4/72 (5%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159 ++D G G+G + +A LK + +G+DI +A++ ++ NA NGVSER + L D Sbjct: 173 LIDFGCGSGILAIAALKLG-AARAIGIDIDPQAIQASRDNAQRNGVSERLELYLAKD--Q 229 Query: 160 SVEGLFDVIVSN 171 E DV+V+N Sbjct: 230 PAELSADVVVAN 241 >gi|325956086|ref|YP_004286696.1| methyltransferase small [Lactobacillus acidophilus 30SC] gi|325332651|gb|ADZ06559.1| Methyltransferase small [Lactobacillus acidophilus 30SC] Length = 206 Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust. Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 3/75 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 ILD+GTG G + L K P VD++ + L +A+ NA N +S D SD ++ Sbjct: 67 ILDVGTGYGPIGLFAAKFWPDQTVDMVDVNERGLNLARQNAKNNHIS-NVDIYTSDCYAQ 125 Query: 161 VEG--LFDVIVSNPP 173 V+ F +I++NPP Sbjct: 126 VDNDKKFGLILTNPP 140 >gi|308190009|ref|YP_003922940.1| site-specific DNA-methyltransferase (adenine-specific) [Mycoplasma fermentans JER] gi|307624751|gb|ADN69056.1| site-specific DNA-methyltransferase (adenine-specific) [Mycoplasma fermentans JER] Length = 540 Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust. Identities = 41/144 (28%), Positives = 68/144 (47%), Gaps = 22/144 (15%) Query: 52 HRILGWRDFYNVRLTLSS--------DTFEPRPETELLVDSALA-FSLPRIE-KRDVVRI 101 H I + D Y +T+ + + F P+ +ELL L FS + E K++V + Sbjct: 188 HNIDAFGDAYEYLMTMYAANAGKSGGEFFTPQEVSELLASLTLVDFSSDKREMKKEVDSV 247 Query: 102 LDLGTGTGAVCLALLK---ESPFFKGV-GVDISCKALEIAKSNAVTNGVS------ERFD 151 D G+G++ L K + KG G +I+ +A+ N +G++ + D Sbjct: 248 YDPACGSGSLLLKFAKILGKDKVTKGFFGQEINLTTYNLARINMFLHGINFADFSIKHGD 307 Query: 152 TL-QSDWFSSVEGLFDVIVSNPPY 174 TL +F +V+ F+ IVSNPPY Sbjct: 308 TLNHPQYFENVKN-FEAIVSNPPY 330 >gi|284006323|emb|CBA71558.1| 16S RNA methyltransferase C [Arsenophonus nasoniae] Length = 338 Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust. Identities = 23/88 (26%), Positives = 43/88 (48%), Gaps = 2/88 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LD+ +G G + + K++P K D A+ + NG++ L SD +S Sbjct: 199 KLLDMASGCGVLSTVIGKKNPNIKLTLCDTHAAAIRSSIETLKINGLTGHI--LPSDIYS 256 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEV 187 ++E +D I+ NPP+ + + D E Sbjct: 257 TIEDSYDWIICNPPFHDGLKTDYTAAET 284 >gi|268317875|ref|YP_003291594.1| ribosomal L11 methyltransferase [Rhodothermus marinus DSM 4252] gi|262335409|gb|ACY49206.1| ribosomal L11 methyltransferase [Rhodothermus marinus DSM 4252] Length = 285 Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust. Identities = 27/73 (36%), Positives = 38/73 (52%), Gaps = 1/73 (1%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 R+LD GTGTG + +A LK + DI A E A+ N NGV++R + Q Sbjct: 149 ARVLDAGTGTGILTIAALKLG-AGSAIAFDIDPWAAENAQENFARNGVADRVEFRQGSIE 207 Query: 159 SSVEGLFDVIVSN 171 E FD+I++N Sbjct: 208 VVPERDFDLILAN 220 >gi|193214995|ref|YP_001996194.1| Mg-protoporphyrin IX methyl transferase [Chloroherpeton thalassium ATCC 35110] gi|193088472|gb|ACF13747.1| magnesium protoporphyrin O-methyltransferase [Chloroherpeton thalassium ATCC 35110] Length = 233 Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust. Identities = 32/116 (27%), Positives = 56/116 (48%), Gaps = 11/116 (9%) Query: 54 ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113 I G ++ ++R T+ + + E + ++ +LP+ ILD G GTG + Sbjct: 30 IYGQKEVSSIRKTVRDGHAQMMAQAESWL---MSHNLPK-----GATILDAGCGTGLFSI 81 Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIV 169 A+ K F +DI+ + +E AK +A GV++R + D S+ G FD +V Sbjct: 82 AIAKRG--FNVTAIDIAAQMVEQAKVDAKREGVADRINFNVGD-LESISGSFDAVV 134 >gi|157690889|ref|YP_001485351.1| 16S rRNA methyltransferase [Bacillus pumilus SAFR-032] gi|157679647|gb|ABV60791.1| possible 16S rRNA methyltransferase [Bacillus pumilus SAFR-032] Length = 201 Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust. Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 3/75 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LD+G G G + L+L E +D++ +A+E++K NA N + + QSD FS+ Sbjct: 62 VLDVGCGYGPIGLSLANEMTSRTIHMIDVNERAVELSKENAKHNRI-DNVRIYQSDLFSN 120 Query: 161 VE--GLFDVIVSNPP 173 V F I++NPP Sbjct: 121 VHSSAAFASILTNPP 135 >gi|145634581|ref|ZP_01790290.1| phosphatidylserine synthase [Haemophilus influenzae PittAA] gi|148825297|ref|YP_001290050.1| phosphatidylserine synthase [Haemophilus influenzae PittEE] gi|229844417|ref|ZP_04464557.1| phosphatidylserine synthase [Haemophilus influenzae 6P18H1] gi|262828354|sp|A5UA66|TRMN6_HAEIE RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName: Full=tRNA m6A37 methyltransferase gi|145268126|gb|EDK08121.1| phosphatidylserine synthase [Haemophilus influenzae PittAA] gi|148715457|gb|ABQ97667.1| phosphatidylserine synthase [Haemophilus influenzae PittEE] gi|229812666|gb|EEP48355.1| phosphatidylserine synthase [Haemophilus influenzae 6P18H1] Length = 232 Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust. Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 4/84 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD--- 156 ILD+G+GTG + L L + + + V++ A + A+ N + R +Q+D Sbjct: 39 ILDMGSGTGLLALMLAQRTEENCQIQAVELDPIAAKQAQENINNSVWKNRIQLIQTDIQH 98 Query: 157 WFSSVEGLFDVIVSNPPYIESVIV 180 + + FD+IV+NPPY E I Sbjct: 99 FLQTTAQTFDLIVANPPYFEQGIA 122 >gi|23097566|ref|NP_691032.1| hypothetical protein OB0111 [Oceanobacillus iheyensis HTE831] gi|22775789|dbj|BAC12067.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831] Length = 204 Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust. Identities = 31/76 (40%), Positives = 46/76 (60%), Gaps = 5/76 (6%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ-SDWFS 159 ILD+G G G + L+L E VDI+ +A+E+AK NA N ++ T+Q SD +S Sbjct: 65 ILDVGCGYGPIGLSLAAEFEDRAVSMVDINDRAVELAKRNASVNNITNV--TIQTSDIYS 122 Query: 160 SV-EGL-FDVIVSNPP 173 ++ E L F +V+NPP Sbjct: 123 AIGETLRFAAVVTNPP 138 >gi|325103137|ref|YP_004272791.1| methyltransferase small [Pedobacter saltans DSM 12145] gi|324971985|gb|ADY50969.1| methyltransferase small [Pedobacter saltans DSM 12145] Length = 237 Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust. Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 4/79 (5%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 I D+GTGTG + L L + + K +DI +A++ A N + R + Sbjct: 38 HICDIGTGTGVIALMLAQRNKNAKIDALDIDYRAVDTATKNFENSLFHARLKCYHHSFVE 97 Query: 160 SVE----GLFDVIVSNPPY 174 E +DVIVSNPP+ Sbjct: 98 FFEMNPLKKYDVIVSNPPF 116 >gi|304405871|ref|ZP_07387529.1| methyltransferase small [Paenibacillus curdlanolyticus YK9] gi|304345114|gb|EFM10950.1| methyltransferase small [Paenibacillus curdlanolyticus YK9] Length = 277 Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust. Identities = 23/86 (26%), Positives = 45/86 (52%), Gaps = 5/86 (5%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 +++DL TG G + L LL GV+I + ++AK + N + E+ ++ D + Sbjct: 66 KVIDLCTGNGVIPL-LLSTRTRAAIDGVEIQPRLADMAKRSVTLNNLDEQIQIIEGDLRT 124 Query: 160 ----SVEGLFDVIVSNPPYIESVIVD 181 + +G++D + NPPY+++ D Sbjct: 125 FPRTAGQGIYDAVTVNPPYMQTQTGD 150 >gi|126465775|ref|YP_001040884.1| RNA methylase [Staphylothermus marinus F1] gi|126014598|gb|ABN69976.1| putative RNA methylase [Staphylothermus marinus F1] Length = 160 Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust. Identities = 21/59 (35%), Positives = 32/59 (54%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 + DLG G G + + +KE K VG+D + + A+ NA NGVS R + D+F+ Sbjct: 30 VYDLGCGDGRILIVAVKEFNVKKAVGIDKDPERIREARKNAEKNGVSNRIVLINDDFFN 88 >gi|319442700|ref|ZP_07991856.1| cyclopropane-fatty-acyl-phospholipid synthase [Corynebacterium variabile DSM 44702] Length = 399 Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust. Identities = 35/132 (26%), Positives = 64/132 (48%), Gaps = 11/132 (8%) Query: 60 FYNVRLTLSSDTFEPRPETELLV--DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117 F + L+ SS F+ PE +L D+ + +L R + R+L++GTG G + L + Sbjct: 144 FLDEGLSYSSAFFDKHPEYDLATAQDAKVERALDRAGVGEGSRVLEIGTGWGELSLHAAR 203 Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIES 177 + V +S + ++A+ + G+++R D D + G +D IVS IE Sbjct: 204 RGA--QVTSVTLSTEQADLARERIASEGLADRVDVQLCD-YREATGTYDAIVS----IE- 255 Query: 178 VIVDCLGLEVRD 189 +++ +G E D Sbjct: 256 -MIEAVGAEYWD 266 >gi|260582312|ref|ZP_05850105.1| O-methyltransferase [Haemophilus influenzae NT127] gi|260094680|gb|EEW78575.1| O-methyltransferase [Haemophilus influenzae NT127] Length = 240 Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust. Identities = 26/84 (30%), Positives = 44/84 (52%), Gaps = 4/84 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD--- 156 ILD+G+GTG + L L + + + V++ A++ A+ N + R +Q+D Sbjct: 47 ILDMGSGTGLLALMLAQRTEENCQIQAVELDPIAVKQAQENINDSVWKNRIQLIQTDIQH 106 Query: 157 WFSSVEGLFDVIVSNPPYIESVIV 180 + + FD+IV+NPPY E I Sbjct: 107 FLQTTAQTFDLIVANPPYFEQGIA 130 >gi|239825684|ref|YP_002948308.1| methyltransferase small [Geobacillus sp. WCH70] gi|239805977|gb|ACS23042.1| methyltransferase small [Geobacillus sp. WCH70] Length = 200 Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust. Identities = 30/97 (30%), Positives = 51/97 (52%), Gaps = 9/97 (9%) Query: 78 TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137 T LL+++ F P+++ LD+G G G + L++ K P +DI+ +ALE+A Sbjct: 46 TRLLIET---FEEPKVDGD----FLDVGCGYGPIGLSIAKAFPNRHVDMIDINKRALELA 98 Query: 138 KSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPP 173 N N ++ +SD F+ V + F I++NPP Sbjct: 99 NENKHANHITNA-SIYESDLFAQVGDKKFAAILTNPP 134 >gi|317494237|ref|ZP_07952653.1| ribosomal protein L11 methyltransferase [Enterobacteriaceae bacterium 9_2_54FAA] gi|316918010|gb|EFV39353.1| ribosomal protein L11 methyltransferase [Enterobacteriaceae bacterium 9_2_54FAA] Length = 293 Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust. Identities = 25/72 (34%), Positives = 43/72 (59%), Gaps = 4/72 (5%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159 ++D G G+G + +A LK + +G+DI +A++ ++ NA NGVSER + L D + Sbjct: 162 VIDFGCGSGILAIAALKLG-AARAIGIDIDPQAIQASRDNAQRNGVSERLELYLPKDQPA 220 Query: 160 SVEGLFDVIVSN 171 + DV+V+N Sbjct: 221 DLSA--DVVVAN 230 >gi|91228318|ref|ZP_01262247.1| putative 16S rRNA m2G 1207 methyltransferase [Vibrio alginolyticus 12G01] gi|91188134|gb|EAS74437.1| putative 16S rRNA m2G 1207 methyltransferase [Vibrio alginolyticus 12G01] Length = 341 Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust. Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 6/86 (6%) Query: 89 SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148 +LP++ + +LD G G G + + K +P DI+ A+ +++ NG+S Sbjct: 196 TLPKLSGK----VLDFGCGAGVLGAFMAKANPEIAIEMCDINAYAITSSQATLEANGLSG 251 Query: 149 RFDTLQSDWFSSVEGLFDVIVSNPPY 174 R SD +S E + IVSNPP+ Sbjct: 252 R--VFASDIYSDTEKDYRFIVSNPPF 275 >gi|77918145|ref|YP_355960.1| putative methylase [Pelobacter carbinolicus DSM 2380] gi|77544228|gb|ABA87790.1| putative methylase [Pelobacter carbinolicus DSM 2380] Length = 269 Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust. Identities = 20/47 (42%), Positives = 25/47 (53%) Query: 93 IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKS 139 I K++ ILDLG G G L K SPF VD S + L +AK+ Sbjct: 53 ISKKNAASILDLGCGDGLFIYELAKASPFLNATLVDASSEMLSVAKA 99 >gi|297543642|ref|YP_003675944.1| methyltransferase small [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|296841417|gb|ADH59933.1| methyltransferase small [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 248 Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust. Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 4/80 (5%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 +I+DLG GTG + + + ++ GV+I ++A + V N + +R +Q D Sbjct: 45 KIVDLGCGTGIIPILIAAKTYDTFIYGVEIQEDMADMATRSVVINNMEKRIKIIQGDVRG 104 Query: 160 SVEGL----FDVIVSNPPYI 175 + L FD++ SNPPY+ Sbjct: 105 IEKTLGYEKFDIVTSNPPYM 124 >gi|241760554|ref|ZP_04758647.1| putative methyltransferase [Neisseria flavescens SK114] gi|241319058|gb|EER55560.1| putative methyltransferase [Neisseria flavescens SK114] Length = 371 Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust. Identities = 30/125 (24%), Positives = 57/125 (45%), Gaps = 14/125 (11%) Query: 97 DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 ++ D+GTG+G + A+L + + D + KA+ A +N G+++ + D Sbjct: 192 NIQTAFDIGTGSGVIA-AILTKRGIPNIIATDTNPKAIACATANLKRLGLNKAVNIQSID 250 Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216 F + D+IV NPP++ + +E +DP ++ +GV +H Sbjct: 251 LFP--KSCADLIVCNPPWLPAKPTS--AIETALYDPNHAM---------LTAFLNGVRKH 297 Query: 217 LNKDG 221 LN +G Sbjct: 298 LNPNG 302 >gi|169629596|ref|YP_001703245.1| putative methyltransferase [Mycobacterium abscessus ATCC 19977] gi|169241563|emb|CAM62591.1| Putative methyltransferase [Mycobacterium abscessus] Length = 201 Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust. Identities = 30/80 (37%), Positives = 44/80 (55%), Gaps = 4/80 (5%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 +R+ DL TG+G + LA KE +D+ A+E A+SNA V LQ DW Sbjct: 10 LRVADLCTGSGYLALAAAKEG-AAAVTALDMCPLAVECAQSNA--QRVGADITALQGDWL 66 Query: 159 SSVE-GLFDVIVSNPPYIES 177 + E G FD++++NPPY+ Sbjct: 67 RAKEFGPFDLVLANPPYVPG 86 >gi|223982606|ref|ZP_03632841.1| hypothetical protein HOLDEFILI_00115 [Holdemania filiformis DSM 12042] gi|223965443|gb|EEF69720.1| hypothetical protein HOLDEFILI_00115 [Holdemania filiformis DSM 12042] Length = 203 Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust. Identities = 26/73 (35%), Positives = 39/73 (53%), Gaps = 2/73 (2%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 ILDLG G G + + + K P + + VD++ +A+E+A NA N V SD F + Sbjct: 66 ILDLGCGYGVIGVTVKKMFPDAEMLMVDVNPRAVELAVLNAQKNSVEAEVRV--SDIFGN 123 Query: 161 VEGLFDVIVSNPP 173 V I++NPP Sbjct: 124 VTETLSDILTNPP 136 >gi|300173281|ref|YP_003772447.1| type I restriction-modification system subunit M [Leuconostoc gasicomitatum LMG 18811] gi|299887660|emb|CBL91628.1| type I restriction-modification system, M subunit [Leuconostoc gasicomitatum LMG 18811] Length = 531 Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust. Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 9/90 (10%) Query: 94 EKRDVVRILDLGTGTGAVCLALLKESPFFKGV---GVDISCKALEIAKSNAVTNGV-SER 149 E R I D G+G++ L + + K + G +++ +A+ N + +GV ER Sbjct: 213 EDRTPFHIYDPTMGSGSLMLNIRRYLSNPKQIHYHGQELNTTTYNLARMNLILHGVDQER 272 Query: 150 F-----DTLQSDWFSSVEGLFDVIVSNPPY 174 DTL SDW + FD +V NPPY Sbjct: 273 MNLNNGDTLDSDWPTEEPYQFDAVVMNPPY 302 >gi|293192305|ref|ZP_06609416.1| putative methyltransferase small domain protein [Actinomyces odontolyticus F0309] gi|292820220|gb|EFF79214.1| putative methyltransferase small domain protein [Actinomyces odontolyticus F0309] Length = 204 Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust. Identities = 28/75 (37%), Positives = 39/75 (52%), Gaps = 3/75 (4%) Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSS 160 LDLG G G + + ESP VD++ +A+++ + NA +NG R + SS Sbjct: 64 LDLGCGWGPIATIMSLESPNADVWAVDVNSRAVDLTQRNAQSNGAKGVRALKAEEALTSS 123 Query: 161 VEG--LFDVIVSNPP 173 E FDVI SNPP Sbjct: 124 QESDTRFDVIWSNPP 138 >gi|296127034|ref|YP_003634286.1| methyltransferase small [Brachyspira murdochii DSM 12563] gi|296018850|gb|ADG72087.1| methyltransferase small [Brachyspira murdochii DSM 12563] Length = 199 Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust. Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 2/76 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+LDLG G G V + K K V DI A+ +K NA+ NG+ + ++SD Sbjct: 43 RVLDLGCGYGIVGILAAKIIGEDKVVMCDIDDNAVNTSKENALLNGL-KNISIIKSDGLK 101 Query: 160 SVEGL-FDVIVSNPPY 174 ++ F +I+SNPPY Sbjct: 102 NINYKDFSLILSNPPY 117 >gi|294631977|ref|ZP_06710537.1| methyltransferase type 12 [Streptomyces sp. e14] gi|292835310|gb|EFF93659.1| methyltransferase type 12 [Streptomyces sp. e14] Length = 516 Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust. Identities = 22/50 (44%), Positives = 32/50 (64%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 R+LDLG G G + LLK++ + + VGVD+S +AL IA + +SER Sbjct: 301 RVLDLGCGEGQLVQTLLKDARYTEIVGVDVSVRALTIAGRRLKLDRMSER 350 >gi|225571896|ref|ZP_03780766.1| hypothetical protein CLOHYLEM_07870 [Clostridium hylemonae DSM 15053] gi|225159449|gb|EEG72068.1| hypothetical protein CLOHYLEM_07870 [Clostridium hylemonae DSM 15053] Length = 118 Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust. Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 1/72 (1%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDW 157 ++ILDLGTG+G + + K+ P +G+DI KALE+ + A V F T Sbjct: 47 MKILDLGTGSGYLSFPIAKKYPNISIIGLDIVEKALEVNRFKANEENVQNISFITYDGVN 106 Query: 158 FSSVEGLFDVIV 169 F + FD+++ Sbjct: 107 FPFADNEFDMVI 118 >gi|242279348|ref|YP_002991477.1| methyltransferase type 12 [Desulfovibrio salexigens DSM 2638] gi|242122242|gb|ACS79938.1| Methyltransferase type 12 [Desulfovibrio salexigens DSM 2638] Length = 345 Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust. Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 3/74 (4%) Query: 84 SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143 ++L SLP E ++ R+LDLG G G +C+ ++ P +G D+ +E+A+ Sbjct: 163 ASLISSLP--EYSNIQRMLDLGCGPGIMCMEVVSNHPTMEGFLCDMP-PLIEVAQDEIAA 219 Query: 144 NGVSERFDTLQSDW 157 G+ R T+ D+ Sbjct: 220 AGLESRIHTIAGDY 233 >gi|119468454|ref|ZP_01611545.1| Putative ribosomal RNA small subunit methyltransferase D [Alteromonadales bacterium TW-7] gi|119447962|gb|EAW29227.1| Putative ribosomal RNA small subunit methyltransferase D [Alteromonadales bacterium TW-7] Length = 380 Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust. Identities = 31/95 (32%), Positives = 49/95 (51%), Gaps = 7/95 (7%) Query: 90 LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 LP+ K +I+DLG G G V + L P VD S A+E A+ N V ++ER Sbjct: 225 LPQTPK--AKKIIDLGCGNGVVGVMTLARCPKASVTFVDESYMAVESARLN-VEQNMAER 281 Query: 150 FDT---LQSDWFSSVE-GLFDVIVSNPPYIESVIV 180 FD +++D + E D+++ NPP+ ++ V Sbjct: 282 FDDCEFIENDCLTGFEKNSVDMVLCNPPFHQAQAV 316 >gi|52078600|ref|YP_077391.1| hypothetical protein BL02799 [Bacillus licheniformis ATCC 14580] gi|52783962|ref|YP_089791.1| YbxB [Bacillus licheniformis ATCC 14580] gi|52001811|gb|AAU21753.1| hypothetical protein with SAM binding motif [Bacillus licheniformis ATCC 14580] gi|52346464|gb|AAU39098.1| YbxB [Bacillus licheniformis ATCC 14580] Length = 201 Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust. Identities = 25/74 (33%), Positives = 43/74 (58%), Gaps = 3/74 (4%) Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 LD+G G G + L+L + +D++ +A+E++K NA+ N + + QSD F++V Sbjct: 63 LDVGCGYGPIGLSLAADFEDRMVHMIDVNERAVELSKENALNNQI-DNIKIYQSDLFANV 121 Query: 162 EGL--FDVIVSNPP 173 E F I++NPP Sbjct: 122 EPAKKFASIITNPP 135 >gi|332088087|gb|EGI93212.1| methyltransferase small domain protein [Shigella boydii 5216-82] Length = 245 Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust. Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 5/89 (5%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 V R LD+G G+G + L L + + + V++ +A A+ N + +ER + +D Sbjct: 45 VKRCLDIGAGSGLLALMLAQRTDDSVMIDAVELESEAAAQAQENINQSPWAERINVHTAD 104 Query: 157 ---WFSSVEGLFDVIVSNPPYIESVIVDC 182 W + FD+I+SNPPY + V+C Sbjct: 105 IQQWLTQQTVRFDLIISNPPYYQQG-VEC 132 >gi|154509065|ref|ZP_02044707.1| hypothetical protein ACTODO_01582 [Actinomyces odontolyticus ATCC 17982] gi|153798699|gb|EDN81119.1| hypothetical protein ACTODO_01582 [Actinomyces odontolyticus ATCC 17982] Length = 204 Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust. Identities = 28/75 (37%), Positives = 39/75 (52%), Gaps = 3/75 (4%) Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSS 160 LDLG G G + + ESP VD++ +A+++ + NA +NG R + SS Sbjct: 64 LDLGCGWGPIATIMSLESPNADVWAVDVNSRAVDLTQRNAQSNGAKGVRALKAEEALTSS 123 Query: 161 VEG--LFDVIVSNPP 173 E FDVI SNPP Sbjct: 124 QESDTRFDVIWSNPP 138 >gi|323136701|ref|ZP_08071782.1| methyltransferase small [Methylocystis sp. ATCC 49242] gi|322398018|gb|EFY00539.1| methyltransferase small [Methylocystis sp. ATCC 49242] Length = 245 Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust. Identities = 26/84 (30%), Positives = 42/84 (50%), Gaps = 8/84 (9%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 ILD+G G GAV L +P V+I A +A+ N NG+++R ++D + Sbjct: 43 ILDVGAGAGAVGLMAAVRAPGAAIGLVEIDPGAAALARENVAANGLADRVSVFEADVTAP 102 Query: 161 ----VEGLFD----VIVSNPPYIE 176 GL D ++++NPP+ E Sbjct: 103 GARRAAGLSDEKAALVLTNPPFYE 126 >gi|291565649|dbj|BAI87921.1| hypothetical protein [Arthrospira platensis NIES-39] Length = 415 Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust. Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 6/91 (6%) Query: 84 SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143 +A F + ++ +RILD G GTG+ L++ +P + +G+D+S A+ A+ Sbjct: 47 AAYGFCTGQKPQKTKIRILDAGCGTGSSTEYLIQLNPEAEVLGIDLSSGAIATAQERCRR 106 Query: 144 NGVSER------FDTLQSDWFSSVEGLFDVI 168 +G+S R F + +EG FD+I Sbjct: 107 SGISTRGTPEPQFKQMSLYDVGQLEGEFDLI 137 >gi|27363996|ref|NP_759524.1| putative O-methyltransferase [Vibrio vulnificus CMCP6] gi|81844774|sp|Q8DEQ3|TRMN6_VIBVU RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName: Full=tRNA m6A37 methyltransferase gi|27360113|gb|AAO09051.1| Predicted O-methyltransferase [Vibrio vulnificus CMCP6] Length = 239 Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust. Identities = 25/78 (32%), Positives = 34/78 (43%), Gaps = 1/78 (1%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS- 159 +LD+GTGTG + L + VDI A+E A+ N + R D Sbjct: 46 LLDIGTGTGLLSLMCAQRYVHLSITAVDIDAHAMEAAQENFSHSPWHSRLQLQHGDVLKL 105 Query: 160 SVEGLFDVIVSNPPYIES 177 + FD I+ NPPY S Sbjct: 106 NFTHRFDGIICNPPYFNS 123 >gi|300818852|ref|ZP_07099058.1| methyltransferase small domain protein [Escherichia coli MS 107-1] gi|300528637|gb|EFK49699.1| methyltransferase small domain protein [Escherichia coli MS 107-1] Length = 378 Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust. Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 4/91 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS--ERFDTLQSDWF 158 I+DLG G G + L LL ++P K V VD S A+ ++ N TN +R + + ++ Sbjct: 232 IVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRMNVETNMPEALDRCEFMINNAL 291 Query: 159 SSVEGL-FDVIVSNPPYIES-VIVDCLGLEV 187 S VE F+ ++ NPP+ + + D + E+ Sbjct: 292 SGVEPFRFNAVLCNPPFHQQHALTDNVAWEM 322 >gi|324119690|gb|EGC13571.1| methyltransferase small domain-containing protein [Escherichia coli E1167] Length = 378 Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust. Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 3/77 (3%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS--ERFDTLQSDWF 158 I+DLG G G + L LL ++P K V VD S A+ ++ N TN +R + + ++ Sbjct: 232 IVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRMNVETNMPEALDRCEFMINNAL 291 Query: 159 SSVEGL-FDVIVSNPPY 174 S VE F+ ++ NPP+ Sbjct: 292 SGVEPFRFNAVLCNPPF 308 >gi|315301184|ref|ZP_07872448.1| methyltransferase [Listeria ivanovii FSL F6-596] gi|313630454|gb|EFR98323.1| methyltransferase [Listeria ivanovii FSL F6-596] Length = 201 Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust. Identities = 24/74 (32%), Positives = 38/74 (51%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 +ILD+G G G + L + K + VD++ +ALE+AK NA N + S + + Sbjct: 62 KILDVGCGYGPMGLTIAKAFADSQMEMVDVNLRALELAKENAEINKTTNTHIYESSVYNN 121 Query: 160 SVEGLFDVIVSNPP 173 + I+SNPP Sbjct: 122 VTANDYQAIISNPP 135 >gi|256019001|ref|ZP_05432866.1| putative methyltransferase small domain [Shigella sp. D9] Length = 378 Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust. Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 3/77 (3%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS--ERFDTLQSDWF 158 I+DLG G G + L LL ++P K V VD S A+ ++ N TN +R + + ++ Sbjct: 232 IVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRMNVETNMPEALDRCEFMINNAL 291 Query: 159 SSVEGL-FDVIVSNPPY 174 S VE F+ ++ NPP+ Sbjct: 292 SGVEPFRFNAVLCNPPF 308 >gi|220932865|ref|YP_002509773.1| methyltransferase small [Halothermothrix orenii H 168] gi|219994175|gb|ACL70778.1| methyltransferase small [Halothermothrix orenii H 168] Length = 246 Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust. Identities = 26/98 (26%), Positives = 56/98 (57%), Gaps = 8/98 (8%) Query: 83 DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142 DS L + ++ +D ++DLG+G+G + L L + + +G++I + ++++K +A Sbjct: 26 DSVLLANFVKV--KDGESVVDLGSGSGVIPLLLAFKQKPGRVIGLEILPELVQLSKKSAR 83 Query: 143 TNGVSERFDTLQSDW-----FSSVEGLFDVIVSNPPYI 175 NG+ E + ++ D + +E + D++V NPPY+ Sbjct: 84 MNGLEEIIEFIEGDIKEIDDYIELESV-DLVVCNPPYM 120 >gi|322387142|ref|ZP_08060752.1| hypothetical protein HMPREF9423_0150 [Streptococcus infantis ATCC 700779] gi|321141671|gb|EFX37166.1| hypothetical protein HMPREF9423_0150 [Streptococcus infantis ATCC 700779] Length = 192 Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust. Identities = 51/191 (26%), Positives = 83/191 (43%), Gaps = 28/191 (14%) Query: 76 PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG-VDISCKAL 134 P+ + L D A ++ + ILD G GTG + L L K+S K V VDI+ K L Sbjct: 15 PKNQFLADLVNAEIKQQVSELSTKSILDFGGGTGLIALPLAKQS---KSVTLVDIAEKML 71 Query: 135 EIAKSNAVTNGVSERFDTLQSDW-FSSVEGLFDVIV-----SNPPYIESVIVDCLGLEVR 188 E A+ V N E +Q D +E FD+I+ + P+ +S GL + Sbjct: 72 EQARIK-VENQKLENLHLIQQDLVLKPLEQTFDLIIVSRVLHHMPHFDS------GLAM- 123 Query: 189 DFDPRISLDGGI--------DGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 F ++L G + DG +H I++ + L G ++ D + + + Sbjct: 124 -FKEHLTLGGQLFIADYTVPDGENHGFIISE-LEETLKNHGFSDIQTQILYSSDTLFLDK 181 Query: 241 SRKLFLVNAFK 251 +LFL +A + Sbjct: 182 PSQLFLTSAIR 192 >gi|191166840|ref|ZP_03028665.1| methyltransferase family protein [Escherichia coli B7A] gi|193061934|ref|ZP_03043030.1| methyltransferase family protein [Escherichia coli E22] gi|193067296|ref|ZP_03048264.1| methyltransferase family protein [Escherichia coli E110019] gi|194427684|ref|ZP_03060231.1| methyltransferase family protein [Escherichia coli B171] gi|209920555|ref|YP_002294639.1| hypothetical protein ECSE_3364 [Escherichia coli SE11] gi|218555652|ref|YP_002388565.1| putative methyltransferase small domain [Escherichia coli IAI1] gi|218696788|ref|YP_002404455.1| putative methyltransferase small domain [Escherichia coli 55989] gi|260845896|ref|YP_003223674.1| putative methyltransferase small domain [Escherichia coli O103:H2 str. 12009] gi|300821681|ref|ZP_07101827.1| methyltransferase small domain protein [Escherichia coli MS 119-7] gi|300905770|ref|ZP_07123504.1| methyltransferase small domain protein [Escherichia coli MS 84-1] gi|301301870|ref|ZP_07208004.1| methyltransferase small domain protein [Escherichia coli MS 124-1] gi|307310293|ref|ZP_07589941.1| rRNA (guanine-N(2)-)-methyltransferase [Escherichia coli W] gi|309793651|ref|ZP_07688077.1| methyltransferase small domain protein [Escherichia coli MS 145-7] gi|312972651|ref|ZP_07786824.1| ribosomal RNA large subunit methyltransferase G [Escherichia coli 1827-70] gi|331669892|ref|ZP_08370737.1| ribosomal RNA large subunit methyltransferase G (rRNA(guanine-N(2)-)-methyltransferase) (23S rRNA m2G1835methyltransferase) [Escherichia coli TA271] gi|331679159|ref|ZP_08379831.1| ribosomal RNA large subunit methyltransferase G (rRNA(guanine-N(2)-)-methyltransferase) (23S rRNA m2G1835methyltransferase) [Escherichia coli H591] gi|190903082|gb|EDV62806.1| methyltransferase family protein [Escherichia coli B7A] gi|192932154|gb|EDV84752.1| methyltransferase family protein [Escherichia coli E22] gi|192959253|gb|EDV89688.1| methyltransferase family protein [Escherichia coli E110019] gi|194414192|gb|EDX30467.1| methyltransferase family protein [Escherichia coli B171] gi|209913814|dbj|BAG78888.1| conserved hypothetical protein [Escherichia coli SE11] gi|218353520|emb|CAU99651.1| putative methyltransferase small domain [Escherichia coli 55989] gi|218362420|emb|CAR00044.1| putative methyltransferase small domain [Escherichia coli IAI1] gi|257761043|dbj|BAI32540.1| predicted methyltransferase small domain [Escherichia coli O103:H2 str. 12009] gi|300402369|gb|EFJ85907.1| methyltransferase small domain protein [Escherichia coli MS 84-1] gi|300525819|gb|EFK46888.1| methyltransferase small domain protein [Escherichia coli MS 119-7] gi|300842851|gb|EFK70611.1| methyltransferase small domain protein [Escherichia coli MS 124-1] gi|306909188|gb|EFN39683.1| rRNA (guanine-N(2)-)-methyltransferase [Escherichia coli W] gi|308122608|gb|EFO59870.1| methyltransferase small domain protein [Escherichia coli MS 145-7] gi|310332593|gb|EFP99806.1| ribosomal RNA large subunit methyltransferase G [Escherichia coli 1827-70] gi|315062390|gb|ADT76717.1| predicted methyltransferase small domain [Escherichia coli W] gi|315257000|gb|EFU36968.1| methyltransferase small domain protein [Escherichia coli MS 85-1] gi|320201994|gb|EFW76569.1| putative enzyme [Escherichia coli EC4100B] gi|323163134|gb|EFZ48967.1| ribosomal RNA large subunit methyltransferase G [Escherichia coli E128010] gi|323183033|gb|EFZ68431.1| ribosomal RNA large subunit methyltransferase G [Escherichia coli 1357] gi|323377022|gb|ADX49290.1| methyltransferase small [Escherichia coli KO11] gi|323941819|gb|EGB37998.1| methyltransferase small domain-containing protein [Escherichia coli E482] gi|323946847|gb|EGB42865.1| methyltransferase small domain-containing protein [Escherichia coli H120] gi|324018195|gb|EGB87414.1| methyltransferase small domain protein [Escherichia coli MS 117-3] gi|331062805|gb|EGI34719.1| ribosomal RNA large subunit methyltransferase G (rRNA(guanine-N(2)-)-methyltransferase) (23S rRNA m2G1835methyltransferase) [Escherichia coli TA271] gi|331073224|gb|EGI44547.1| ribosomal RNA large subunit methyltransferase G (rRNA(guanine-N(2)-)-methyltransferase) (23S rRNA m2G1835methyltransferase) [Escherichia coli H591] Length = 378 Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust. Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 3/77 (3%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS--ERFDTLQSDWF 158 I+DLG G G + L LL ++P K V VD S A+ ++ N TN +R + + ++ Sbjct: 232 IVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRMNVETNMPEALDRCEFMINNAL 291 Query: 159 SSVEGL-FDVIVSNPPY 174 S VE F+ ++ NPP+ Sbjct: 292 SGVEPFRFNAVLCNPPF 308 >gi|157162560|ref|YP_001459878.1| methyltransferase family protein [Escherichia coli HS] gi|229470494|sp|A8A4P1|RLMG_ECOHS RecName: Full=Ribosomal RNA large subunit methyltransferase G; AltName: Full=23S rRNA m2G1835 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rlmG gi|157068240|gb|ABV07495.1| methyltransferase family protein [Escherichia coli HS] Length = 378 Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust. Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 3/77 (3%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS--ERFDTLQSDWF 158 I+DLG G G + L LL ++P K V VD S A+ ++ N TN +R + + ++ Sbjct: 232 IVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRMNVETNMPEALDRCEFMINNAL 291 Query: 159 SSVEGL-FDVIVSNPPY 174 S VE F+ ++ NPP+ Sbjct: 292 SGVEPFRFNAVLCNPPF 308 >gi|330833924|ref|YP_004408652.1| rRNA methyltransferase small [Metallosphaera cuprina Ar-4] gi|329566063|gb|AEB94168.1| rRNA methyltransferase small [Metallosphaera cuprina Ar-4] Length = 186 Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust. Identities = 26/90 (28%), Positives = 48/90 (53%), Gaps = 1/90 (1%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 ++DLG G G + + L ++P + +D + A++ +K N + ER L+SD S+ Sbjct: 50 VVDLGCGYGPIGIYLALQNPSLRVYMLDANPLAVKASKENVERYKLKERVTVLRSDVLSA 109 Query: 161 VEGLFDVIVSNPPYIESV-IVDCLGLEVRD 189 ++ I SNPP + V I++ L +E + Sbjct: 110 LDVKASAIFSNPPLSKGVEILEKLAVEASE 139 >gi|253583475|ref|ZP_04860673.1| methyltransferase [Fusobacterium varium ATCC 27725] gi|251834047|gb|EES62610.1| methyltransferase [Fusobacterium varium ATCC 27725] Length = 393 Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust. Identities = 35/124 (28%), Positives = 56/124 (45%), Gaps = 27/124 (21%) Query: 76 PETELLVDSALAFSLPRIE---------KRDV-----------VRILDLGTGTGAVCLAL 115 PE ++ D+ L +S+ IE +RD + LD+ + +G +A Sbjct: 175 PERVIMEDNGLKYSIDIIEGQKTGFFLDQRDSRKFIRKYLTKDTKFLDVFSSSGGFSMAA 234 Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIV 169 LKE+ K +D ALE+ + N + NG F T++ D F ++ L FDVI Sbjct: 235 LKENCK-KVTAIDKEPHALELCRENYILNGFDGDFVTMEGDAFLLLKTLVGRNEKFDVIT 293 Query: 170 SNPP 173 +PP Sbjct: 294 LDPP 297 >gi|162451006|ref|YP_001613373.1| ubiquinone/menaquinone biosynthesis methyltransferase ubiE [Sorangium cellulosum 'So ce 56'] gi|161161588|emb|CAN92893.1| Ubiquinone/menaquinone biosynthesis methyltransferase ubiE [Sorangium cellulosum 'So ce 56'] Length = 499 Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust. Identities = 46/173 (26%), Positives = 75/173 (43%), Gaps = 45/173 (26%) Query: 4 LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGW------ 57 LR S + CR+ L +H ++ P VLDD++ +++ +A V +L + + GW Sbjct: 164 LRVSLARTCRLRELLAHLYVLVP--VLDDKKHYYVGDAEVENL----LAKGKGWLSEHPE 217 Query: 58 ------------RDFYNVRLT--LSSDTFEP------------RPETELLVDSA----LA 87 R + L ++ D P R E + +D A + Sbjct: 218 REAIALRYLKHSRPLFRAALARLVADDEASPEEAEDEKAAPEDRGEARMSLDEARREAVV 277 Query: 88 FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140 +L R E R V LDLG G G + L+ E F + G D+S ++LEIA++ Sbjct: 278 AALRRAEARSV---LDLGCGEGKLLKRLVDERVFERVAGADVSVRSLEIARNR 327 >gi|87307197|ref|ZP_01089342.1| hypothetical protein DSM3645_16780 [Blastopirellula marina DSM 3645] gi|87289937|gb|EAQ81826.1| hypothetical protein DSM3645_16780 [Blastopirellula marina DSM 3645] Length = 335 Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust. Identities = 31/104 (29%), Positives = 47/104 (45%), Gaps = 17/104 (16%) Query: 70 DTFEPRPETELLVDSALAFSLPRIEKRDVVRIL------------DLGTGTGAVCLALLK 117 D PE+ + D+A+ I R+ IL D+G G G+ +ALL Sbjct: 133 DYLSQHPESAAIFDAAMT----SIHGRETAAILEAYDFSQFGLIADVGGGNGSKLIALLT 188 Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 + P +G+ VD+ +E A N V GV+ER + D+F V Sbjct: 189 KHPQVRGMLVDLP-HVVERAAPNFVAAGVNERMTLIGGDFFVEV 231 >gi|320182100|gb|EFW57004.1| putative methyltransferase [Shigella boydii ATCC 9905] Length = 245 Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust. Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 5/89 (5%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 V R LD+G G+G + L L + + + V++ +A A+ N + +ER + +D Sbjct: 45 VKRCLDIGAGSGLLALMLAQRTDDSVMIDAVELESEAAAQAQENINQSPWAERINVHTAD 104 Query: 157 ---WFSSVEGLFDVIVSNPPYIESVIVDC 182 W + FD+I+SNPPY + V+C Sbjct: 105 IQQWLTQQTVRFDLIISNPPYYQQG-VEC 132 >gi|293449421|ref|ZP_06663842.1| ribosomal RNA large subunit methyltransferase G [Escherichia coli B088] gi|291322511|gb|EFE61940.1| ribosomal RNA large subunit methyltransferase G [Escherichia coli B088] Length = 378 Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust. Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 3/77 (3%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS--ERFDTLQSDWF 158 I+DLG G G + L LL ++P K V VD S A+ ++ N TN +R + + ++ Sbjct: 232 IVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRMNVETNMPEALDRCEFMINNAL 291 Query: 159 SSVEGL-FDVIVSNPPY 174 S VE F+ ++ NPP+ Sbjct: 292 SGVEPFRFNAVLCNPPF 308 >gi|116492640|ref|YP_804375.1| O-methyltransferase [Pediococcus pentosaceus ATCC 25745] gi|116102790|gb|ABJ67933.1| Predicted O-methyltransferase [Pediococcus pentosaceus ATCC 25745] Length = 251 Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust. Identities = 29/99 (29%), Positives = 50/99 (50%), Gaps = 5/99 (5%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 +D+ L + ++K +I+DL +G GAV L L K++ + V+I + E+A + Sbjct: 32 LDAVLLANFAEVKKASKTKIVDLCSGNGAVGLFLSKKTAGHVTM-VEIQSRLAEMAMRSI 90 Query: 142 VTNGVSERFDTLQ---SDWFSSVEG-LFDVIVSNPPYIE 176 N +++R+D D + + D IV NPPY E Sbjct: 91 QLNDLTDRYDVYNMPLKDALTKINADSIDNIVCNPPYFE 129 >gi|113475847|ref|YP_721908.1| type 12 methyltransferase [Trichodesmium erythraeum IMS101] gi|110166895|gb|ABG51435.1| Methyltransferase type 12 [Trichodesmium erythraeum IMS101] Length = 403 Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust. Identities = 23/63 (36%), Positives = 34/63 (53%) Query: 85 ALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN 144 A +F + K+ +RILD G GTG+ L+ +P VG+D+S AL +AK + Sbjct: 42 AYSFCTGQKPKKQDIRILDAGCGTGSSTDYLVHLNPQASVVGIDLSSGALRVAKERCSRS 101 Query: 145 GVS 147 G S Sbjct: 102 GAS 104 >gi|291435449|ref|ZP_06574839.1| methyltransferase [Streptomyces ghanaensis ATCC 14672] gi|291338344|gb|EFE65300.1| methyltransferase [Streptomyces ghanaensis ATCC 14672] Length = 228 Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust. Identities = 33/107 (30%), Positives = 54/107 (50%), Gaps = 10/107 (9%) Query: 72 FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131 + P+ +TELL + +P +LD+GTG + LAL + VD+S Sbjct: 21 YAPQEDTELLAGALSDEPVP-----PGADVLDMGTG--SGALALEAARRGTRVTAVDVSW 73 Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIES 177 +A+ + NA+ GV R + + F V G FD+I++NPPY+ + Sbjct: 74 RAVCTTRLNALVAGVPVRVR--RGNLFDPVRGRSFDLILANPPYVPA 118 >gi|213053185|ref|ZP_03346063.1| hypothetical protein Salmoneentericaenterica_09800 [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] Length = 378 Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust. Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 4/91 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN--GVSERFDTLQSDWF 158 I+DLG G G + L+LL ++P V VD S A++ ++ N TN ER + + ++ Sbjct: 232 IVDLGCGNGVIGLSLLAKNPQANVVFVDESPMAVDSSRLNVETNLPEAFERCEFMINNAL 291 Query: 159 SSVEGL-FDVIVSNPPYIES-VIVDCLGLEV 187 S VE F+ + NPP+ + + D + E+ Sbjct: 292 SGVEPFRFNAVFCNPPFHQKHALTDNIAWEM 322 >gi|168243053|ref|ZP_02667985.1| methyltransferase family protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|194450232|ref|YP_002047257.1| methyltransferase family protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|200387845|ref|ZP_03214457.1| methyltransferase family protein [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|229564344|sp|B4TIU8|RLMG_SALHS RecName: Full=Ribosomal RNA large subunit methyltransferase G; AltName: Full=23S rRNA m2G1835 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rlmG gi|194408536|gb|ACF68755.1| methyltransferase family protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|199604943|gb|EDZ03488.1| methyltransferase family protein [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|205337838|gb|EDZ24602.1| methyltransferase family protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] Length = 378 Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust. Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 4/91 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN--GVSERFDTLQSDWF 158 I+DLG G G + L+LL ++P V VD S A++ ++ N TN ER + + ++ Sbjct: 232 IVDLGCGNGVIGLSLLAKNPQANVVFVDESPMAVDSSRLNVETNLPEAFERCEFMINNAL 291 Query: 159 SSVEGL-FDVIVSNPPYIES-VIVDCLGLEV 187 S VE F+ + NPP+ + + D + E+ Sbjct: 292 SGVEPFRFNAVFCNPPFHQKHALTDNIAWEM 322 >gi|161760558|ref|YP_072057.2| ribosomal protein L11 methyltransferase [Yersinia pseudotuberculosis IP 32953] gi|186897061|ref|YP_001874173.1| ribosomal protein L11 methyltransferase [Yersinia pseudotuberculosis PB1/+] gi|60390350|sp|Q665E3|PRMA_YERPS RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11 Mtase gi|226710128|sp|B2K467|PRMA_YERPB RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11 Mtase gi|186700087|gb|ACC90716.1| ribosomal protein L11 methyltransferase [Yersinia pseudotuberculosis PB1/+] Length = 293 Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust. Identities = 26/72 (36%), Positives = 42/72 (58%), Gaps = 4/72 (5%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159 ++D G G+G + +A LK + +G+DI +A++ ++ NA NGVSER + L D Sbjct: 162 LIDFGCGSGILAIAALKLG-AARAIGIDIDPQAIQASRDNAQRNGVSERLELYLAKD--Q 218 Query: 160 SVEGLFDVIVSN 171 E DV+V+N Sbjct: 219 PAELSADVVVAN 230 >gi|269125964|ref|YP_003299334.1| type 12 methyltransferase [Thermomonospora curvata DSM 43183] gi|268310922|gb|ACY97296.1| Methyltransferase type 12 [Thermomonospora curvata DSM 43183] Length = 474 Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust. Identities = 30/97 (30%), Positives = 44/97 (45%), Gaps = 14/97 (14%) Query: 73 EPR-PETELLVDSALAFSLPRIEKR-----------DVVRILDLGTGTGAVCLALLKESP 120 EP+ P D L + P E+R D R++DLG G G + LL + Sbjct: 260 EPQAPPAACEEDGGLPAAAPLAEQRIRAVLQVLRDHDAPRVIDLGCGAGRLLTRLLADPF 319 Query: 121 FFKGVGVDISCKALEIAKSNA--VTNGVSERFDTLQS 155 F + GVD+S +AL +A+ NA G R++ Q Sbjct: 320 FTRVTGVDVSHRALAMARRNAERAAVGRERRWEVFQG 356 >gi|145300504|ref|YP_001143345.1| O-methyltransferase [Aeromonas salmonicida subsp. salmonicida A449] gi|262827853|sp|A4SRS5|TRMN6_AERS4 RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName: Full=tRNA m6A37 methyltransferase gi|142853276|gb|ABO91597.1| predicted O-methyltransferase [Aeromonas salmonicida subsp. salmonicida A449] Length = 236 Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust. Identities = 28/85 (32%), Positives = 41/85 (48%), Gaps = 4/85 (4%) Query: 91 PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSER 149 P E R R+LD+GTG+G V L L + S + VD+ A A+ N + R Sbjct: 35 PVAETR---RVLDIGTGSGLVALMLAQRSRSDCIIDAVDLDMNAATQARENVAASPWETR 91 Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPY 174 + ++ +D+IVSNPPY Sbjct: 92 INIMEGAIQDYQATPYDLIVSNPPY 116 >gi|257126532|ref|YP_003164646.1| methyltransferase small [Leptotrichia buccalis C-1013-b] gi|257050471|gb|ACV39655.1| methyltransferase small [Leptotrichia buccalis C-1013-b] Length = 242 Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust. Identities = 32/101 (31%), Positives = 46/101 (45%), Gaps = 10/101 (9%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 +DS L +I R +ILD+GTG G + L L + S + G+++ EI N Sbjct: 28 LDSVLLADFVKI-NRKTKKILDIGTGCGIIALLLAQRSK-AQITGIELQETMAEITIRNI 85 Query: 142 VTNGVSERFDTLQSD------WFSSVEGLFDVIVSNPPYIE 176 N + + D F+ E FD IV+NPPY E Sbjct: 86 NGNKFENQVKIINEDIKNYKNIFNRDE--FDTIVTNPPYFE 124 >gi|198244714|ref|YP_002217201.1| methyltransferase family protein [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|207858477|ref|YP_002245128.1| hypothetical protein SEN3062 [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|229564341|sp|B5FHV5|RLMG_SALDC RecName: Full=Ribosomal RNA large subunit methyltransferase G; AltName: Full=23S rRNA m2G1835 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rlmG gi|229564342|sp|B5QZ55|RLMG_SALEP RecName: Full=Ribosomal RNA large subunit methyltransferase G; AltName: Full=23S rRNA m2G1835 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rlmG gi|197939230|gb|ACH76563.1| methyltransferase family protein [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|206710280|emb|CAR34638.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|326624977|gb|EGE31322.1| methyltransferase family protein [Salmonella enterica subsp. enterica serovar Dublin str. 3246] Length = 378 Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust. Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 4/91 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN--GVSERFDTLQSDWF 158 I+DLG G G + L+LL ++P V VD S A++ ++ N TN ER + + ++ Sbjct: 232 IVDLGCGNGVIGLSLLAKNPQANVVFVDESPMAVDSSRLNVETNLPEAFERCEFMINNAL 291 Query: 159 SSVEGL-FDVIVSNPPYIES-VIVDCLGLEV 187 S VE F+ + NPP+ + + D + E+ Sbjct: 292 SGVEPFRFNAVFCNPPFHQKHALTDNIAWEM 322 >gi|152965470|ref|YP_001361254.1| methyltransferase small [Kineococcus radiotolerans SRS30216] gi|151359987|gb|ABS02990.1| methyltransferase small [Kineococcus radiotolerans SRS30216] Length = 202 Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust. Identities = 34/96 (35%), Positives = 45/96 (46%), Gaps = 10/96 (10%) Query: 82 VDSALAFSLPRIEKRDVVR-ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140 VD A LP IE D +LDLG G G + L+L P VD++ +AL++ + N Sbjct: 43 VDQGTAVLLPLIEDADAAGDVLDLGCGWGPIALSLALRRPRQVVHAVDVNERALDLLRHN 102 Query: 141 AVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPP 173 A GV+ R D + D F I SNPP Sbjct: 103 AARLGVAVRASLPDEVDEDLR------FTEIWSNPP 132 >gi|107026560|ref|YP_624071.1| methyltransferase type 11 [Burkholderia cenocepacia AU 1054] gi|116692250|ref|YP_837783.1| methyltransferase type 11 [Burkholderia cenocepacia HI2424] gi|105895934|gb|ABF79098.1| Methyltransferase type 11 [Burkholderia cenocepacia AU 1054] gi|116650250|gb|ABK10890.1| Methyltransferase type 11 [Burkholderia cenocepacia HI2424] Length = 282 Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust. Identities = 21/53 (39%), Positives = 32/53 (60%), Gaps = 1/53 (1%) Query: 99 VRILDLGTGTGAVCLALLKE-SPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150 R+LD+G GTGAV LA+ + + G+DIS + ++ A++ A GV RF Sbjct: 50 TRVLDVGCGTGAVTLAIARRLGASAQCTGIDISARMIDAARARAERGGVPARF 102 >gi|302871656|ref|YP_003840292.1| ribosomal protein L11 methyltransferase [Caldicellulosiruptor obsidiansis OB47] gi|302574515|gb|ADL42306.1| ribosomal protein L11 methyltransferase [Caldicellulosiruptor obsidiansis OB47] Length = 314 Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust. Identities = 37/132 (28%), Positives = 69/132 (52%), Gaps = 15/132 (11%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 + +LD+GTG+G + +A K+ + + VDI A+++AK NA NGV + +++ Sbjct: 170 MNVLDVGTGSGILAIAA-KKLLAKRVLAVDIDEVAVKVAKENANLNGV--EIEIKKNNLV 226 Query: 159 SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI---DGLSHYRTIADGVSR 215 +E FD++V+N ++ D + + + + R+ D GI G+ R + V + Sbjct: 227 EGIEEKFDIVVAN------IVADII-IRLSTYVNRVLKDSGIFISSGIIENRL--EDVLK 277 Query: 216 HLNKDGLCSVEI 227 K+GL VE+ Sbjct: 278 SFAKNGLKVVEV 289 >gi|226327274|ref|ZP_03802792.1| hypothetical protein PROPEN_01140 [Proteus penneri ATCC 35198] gi|225204492|gb|EEG86846.1| hypothetical protein PROPEN_01140 [Proteus penneri ATCC 35198] Length = 169 Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust. Identities = 22/74 (29%), Positives = 40/74 (54%), Gaps = 2/74 (2%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LD+ G G + L K++P K D++ A+ + + N + R + S+ +S+ Sbjct: 31 LLDMACGCGVLATVLGKKNPMLKLTLCDVNAAAISSSIATLNVNELEGR--VIASNVYSA 88 Query: 161 VEGLFDVIVSNPPY 174 VE +D I+SNPP+ Sbjct: 89 VEETYDWIISNPPF 102 >gi|16761992|ref|NP_457609.1| hypothetical protein STY3400 [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29143479|ref|NP_806821.1| hypothetical protein t3140 [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|213022213|ref|ZP_03336660.1| hypothetical protein Salmonelentericaenterica_05882 [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] gi|213417454|ref|ZP_03350596.1| hypothetical protein Salmonentericaenterica_05977 [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] gi|213427205|ref|ZP_03359955.1| hypothetical protein SentesTyphi_17297 [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213583083|ref|ZP_03364909.1| hypothetical protein SentesTyph_18488 [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] gi|213616324|ref|ZP_03372150.1| hypothetical protein SentesTyp_18364 [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] gi|213646099|ref|ZP_03376152.1| hypothetical protein SentesTy_01329 [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|213852651|ref|ZP_03382183.1| hypothetical protein SentesT_07161 [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|289825888|ref|ZP_06545048.1| hypothetical protein Salmonellentericaenterica_10825 [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|81853214|sp|Q8Z3L8|RLMG_SALTI RecName: Full=Ribosomal RNA large subunit methyltransferase G; AltName: Full=23S rRNA m2G1835 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rlmG gi|25511898|pir||AB0894 conserved hypothetical protein STY3400 [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16504295|emb|CAD07744.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Typhi] gi|29139113|gb|AAO70681.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] Length = 378 Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust. Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 4/91 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN--GVSERFDTLQSDWF 158 I+DLG G G + L+LL ++P V VD S A++ ++ N TN ER + + ++ Sbjct: 232 IVDLGCGNGVIGLSLLAKNPQANVVFVDESPMAVDSSRLNVETNLPEAFERCEFMINNAL 291 Query: 159 SSVEGL-FDVIVSNPPYIES-VIVDCLGLEV 187 S VE F+ + NPP+ + + D + E+ Sbjct: 292 SGVEPFRFNAVFCNPPFHQKHALTDNIAWEM 322 >gi|315640769|ref|ZP_07895871.1| methyltransferase [Enterococcus italicus DSM 15952] gi|315483524|gb|EFU74018.1| methyltransferase [Enterococcus italicus DSM 15952] Length = 187 Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust. Identities = 27/88 (30%), Positives = 47/88 (53%), Gaps = 7/88 (7%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LDL +G+G + + + K V VD + +A+ I K N E+F L+ D + Sbjct: 44 KVLDLFSGSGGLAIEAISRG-MDKAVCVDKNYQAISIIKENIQITKEPEKFVVLKMDANA 102 Query: 160 SVEGL------FDVIVSNPPYIESVIVD 181 +++ L FD+I+ +PPY + IVD Sbjct: 103 ALKKLSGEEMKFDLILFDPPYAKQEIVD 130 >gi|284051486|ref|ZP_06381696.1| hypothetical protein AplaP_08424 [Arthrospira platensis str. Paraca] Length = 441 Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust. Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 6/91 (6%) Query: 84 SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143 +A F + ++ +RILD G GTG+ L++ +P + +G+D+S A+ A+ Sbjct: 73 AAYGFCTGQKPQKTKIRILDAGCGTGSSTEYLIQLNPEAEVLGIDLSSGAIATAQERCRR 132 Query: 144 NGVSER------FDTLQSDWFSSVEGLFDVI 168 +G+S R F + +EG FD+I Sbjct: 133 SGISTRGTPEPQFKQMSLYDVGQLEGEFDLI 163 >gi|261248387|emb|CBG26224.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] Length = 378 Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust. Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 4/91 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN--GVSERFDTLQSDWF 158 I+DLG G G + L+LL ++P V VD S A++ ++ N TN ER + + ++ Sbjct: 232 IVDLGCGNGVIGLSLLAKNPQANVVFVDESPMAVDSSRLNVETNLPEAFERCEFMINNAL 291 Query: 159 SSVEGL-FDVIVSNPPYIES-VIVDCLGLEV 187 S VE F+ + NPP+ + + D + E+ Sbjct: 292 SGVEPFRFNAVFCNPPFHQKHALTDNIAWEM 322 >gi|205354134|ref|YP_002227935.1| hypothetical protein SG3116 [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|229564343|sp|B5REH7|RLMG_SALG2 RecName: Full=Ribosomal RNA large subunit methyltransferase G; AltName: Full=23S rRNA m2G1835 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rlmG gi|205273915|emb|CAR38917.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|326629254|gb|EGE35597.1| methyltransferase family protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 378 Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust. Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 4/91 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN--GVSERFDTLQSDWF 158 I+DLG G G + L+LL ++P V VD S A++ ++ N TN ER + + ++ Sbjct: 232 IVDLGCGNGVIGLSLLAKNPQANVVFVDESPMAVDSSRLNVETNLPEAFERCEFMINNAL 291 Query: 159 SSVEGL-FDVIVSNPPYIES-VIVDCLGLEV 187 S VE F+ + NPP+ + + D + E+ Sbjct: 292 SGVEPFRFNAVFCNPPFHQKHALTDNIAWEM 322 >gi|220910420|ref|YP_002485731.1| type 11 methyltransferase [Cyanothece sp. PCC 7425] gi|219867031|gb|ACL47370.1| Methyltransferase type 11 [Cyanothece sp. PCC 7425] Length = 390 Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust. Identities = 22/65 (33%), Positives = 34/65 (52%) Query: 83 DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142 +A +F R +D VRILD G GTG L +P + +D+S KAL +A++ Sbjct: 36 QAAYSFCTGRKPAQDKVRILDAGCGTGVGTEYLCHLNPQAQITAIDLSAKALSVAQTRCQ 95 Query: 143 TNGVS 147 +G + Sbjct: 96 KSGAT 100 >gi|312138720|ref|YP_004006056.1| methyltransferase [Rhodococcus equi 103S] gi|311888059|emb|CBH47371.1| putative methyltransferase [Rhodococcus equi 103S] Length = 377 Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust. Identities = 48/154 (31%), Positives = 72/154 (46%), Gaps = 14/154 (9%) Query: 90 LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 LPR+ R+ +DLG GTG + ++L K P + + D S A+ A + A NGV+ R Sbjct: 227 LPRM--REAGTAVDLGCGTGILAVSLAKAQPSAEVIASDQSAAAVASAAATARANGVAAR 284 Query: 150 FDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDP--RISLDGGIDGLSHY 206 ++ D SS+ E D+I+ NPP+ V G + FD R+ GG Sbjct: 285 VRVIRDDALSSLPESSVDLILCNPPFHVGAAVHT-GSAGKMFDAAGRVLRPGG-----EL 338 Query: 207 RTIAD---GVSRHLNKDGLCSVEIGYNQKVDVVR 237 T+ + G R L + + E+G N K V R Sbjct: 339 WTVYNSHLGYKRALERAVGRTEEVGRNPKFTVTR 372 >gi|255085917|ref|XP_002508925.1| predicted protein [Micromonas sp. RCC299] gi|226524203|gb|ACO70183.1| predicted protein [Micromonas sp. RCC299] Length = 174 Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust. Identities = 30/113 (26%), Positives = 56/113 (49%), Gaps = 9/113 (7%) Query: 72 FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG---AVCLALLKESPF--FKGVG 126 +EP ++ LLVD+ +A R+ L++G+GTG A L+++S F+ Sbjct: 2 YEPAEDSFLLVDTLVAEWDARLANDPPRCALEVGSGTGYVIASAAVLMRDSGLDDFRCHA 61 Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYI 175 D++ A+ ++ A +GV + +Q D + G D+++ NPPY+ Sbjct: 62 TDVNPDAVACTRATADAHGVGDYVTVIQCDLLGPLRERLRGKVDLLLFNPPYV 114 >gi|194471887|ref|ZP_03077871.1| methyltransferase family protein [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194458251|gb|EDX47090.1| methyltransferase family protein [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] Length = 378 Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust. Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 4/91 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN--GVSERFDTLQSDWF 158 I+DLG G G + L+LL ++P V VD S A++ ++ N TN ER + + ++ Sbjct: 232 IVDLGCGNGVIGLSLLAKNPQANVVFVDESPMAVDSSRLNVETNLPEAFERCEFMINNAL 291 Query: 159 SSVEGL-FDVIVSNPPYIES-VIVDCLGLEV 187 S VE F+ + NPP+ + + D + E+ Sbjct: 292 SGVEPFRFNAVFCNPPFHQKHALTDNIAWEM 322 >gi|161616215|ref|YP_001590180.1| hypothetical protein SPAB_04019 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|229564346|sp|A9N601|RLMG_SALPB RecName: Full=Ribosomal RNA large subunit methyltransferase G; AltName: Full=23S rRNA m2G1835 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rlmG gi|161365579|gb|ABX69347.1| hypothetical protein SPAB_04019 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] Length = 378 Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust. Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 4/91 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN--GVSERFDTLQSDWF 158 I+DLG G G + L+LL ++P V VD S A++ ++ N TN ER + + ++ Sbjct: 232 IVDLGCGNGVIGLSLLAKNPQANVVFVDESPMAVDSSRLNVETNLPEAFERCEFMINNAL 291 Query: 159 SSVEGL-FDVIVSNPPYIES-VIVDCLGLEV 187 S VE F+ + NPP+ + + D + E+ Sbjct: 292 SGVEPFRFNAVFCNPPFHQKHALTDNIAWEM 322 >gi|149245584|ref|XP_001527269.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL YB-4239] gi|146449663|gb|EDK43919.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL YB-4239] Length = 220 Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust. Identities = 42/150 (28%), Positives = 70/150 (46%), Gaps = 9/150 (6%) Query: 101 ILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSER---FDTLQSD 156 +L++GTG+G V +L+ P + DI+ A I N + SER D L+ D Sbjct: 47 VLEIGTGSGIVTTFMLQHILPQALYLASDINPSAC-ITARNTIRQNCSERANFVDILRMD 105 Query: 157 WFSSVE-GLFDVIVSNPPYI--ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213 SS+ + DV+V NPPY+ E + + E + ++L GG DG+ + + + Sbjct: 106 LASSLRTNIVDVLVFNPPYVPAEEMPIPPANNEEGELWLDLALLGGKDGMVTTWKVLNLL 165 Query: 214 SRHLNKDGLCSVEI-GYNQKVDVVRIFESR 242 L DG+ + N+ +V I +R Sbjct: 166 QEILASDGIAYILFCARNRPDEVAEIMRNR 195 >gi|16766519|ref|NP_462134.1| methyltransferase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|56415159|ref|YP_152234.1| hypothetical protein SPA3088 [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|167990223|ref|ZP_02571323.1| methyltransferase family protein [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168231825|ref|ZP_02656883.1| methyltransferase family protein [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|168237920|ref|ZP_02662978.1| methyltransferase family protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|168262775|ref|ZP_02684748.1| methyltransferase family protein [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168463565|ref|ZP_02697482.1| methyltransferase family protein [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|168819712|ref|ZP_02831712.1| methyltransferase family protein [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194735079|ref|YP_002116177.1| methyltransferase family protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197364089|ref|YP_002143726.1| hypothetical protein SSPA2884 [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|204928272|ref|ZP_03219472.1| putative ribosomal RNA small subunit methyltransferase D [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|238910022|ref|ZP_04653859.1| hypothetical protein SentesTe_02650 [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|81521597|sp|Q8ZLX5|RLMG_SALTY RecName: Full=Ribosomal RNA large subunit methyltransferase G; AltName: Full=23S rRNA m2G1835 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rlmG gi|81821326|sp|Q5PC93|RLMG_SALPA RecName: Full=Ribosomal RNA large subunit methyltransferase G; AltName: Full=23S rRNA m2G1835 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rlmG gi|229470396|sp|B5BG31|RLMG_SALPK RecName: Full=Ribosomal RNA large subunit methyltransferase G; AltName: Full=23S rRNA m2G1835 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rlmG gi|229470397|sp|B4TVV4|RLMG_SALSV RecName: Full=Ribosomal RNA large subunit methyltransferase G; AltName: Full=23S rRNA m2G1835 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rlmG gi|16421777|gb|AAL22093.1| putative methyltransferase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|56129416|gb|AAV78922.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|194710581|gb|ACF89802.1| methyltransferase family protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|195633487|gb|EDX51901.1| methyltransferase family protein [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197095566|emb|CAR61131.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|197289090|gb|EDY28459.1| methyltransferase family protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|204322594|gb|EDZ07791.1| putative ribosomal RNA small subunit methyltransferase D [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205331276|gb|EDZ18040.1| methyltransferase family protein [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205333928|gb|EDZ20692.1| methyltransferase family protein [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205343310|gb|EDZ30074.1| methyltransferase family protein [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205348321|gb|EDZ34952.1| methyltransferase family protein [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|267995416|gb|ACY90301.1| putative methyltransferase [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301159772|emb|CBW19291.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312914247|dbj|BAJ38221.1| hypothetical protein STMDT12_C32780 [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|320087674|emb|CBY97438.1| putative ribosomal RNA small subunit methyltransferase D [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|321225903|gb|EFX50957.1| 23S rRNA guanine-N-2- -methyltransferase rlmG [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|322613623|gb|EFY10564.1| hypothetical protein SEEM315_07845 [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322621216|gb|EFY18074.1| hypothetical protein SEEM971_20574 [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322624279|gb|EFY21113.1| hypothetical protein SEEM973_20690 [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322627983|gb|EFY24772.1| hypothetical protein SEEM974_20600 [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322633101|gb|EFY29843.1| hypothetical protein SEEM201_11695 [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322636322|gb|EFY33030.1| hypothetical protein SEEM202_14378 [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322643497|gb|EFY40059.1| hypothetical protein SEEM954_04760 [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322647612|gb|EFY44100.1| hypothetical protein SEEM054_00625 [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322648594|gb|EFY45041.1| hypothetical protein SEEM675_03756 [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322653646|gb|EFY49972.1| hypothetical protein SEEM965_21401 [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322657754|gb|EFY54022.1| hypothetical protein SEEM19N_17526 [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322663855|gb|EFY60054.1| hypothetical protein SEEM801_03816 [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322669134|gb|EFY65285.1| hypothetical protein SEEM507_10761 [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322672873|gb|EFY68980.1| hypothetical protein SEEM877_00025 [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322678137|gb|EFY74200.1| hypothetical protein SEEM867_02792 [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322681313|gb|EFY77346.1| hypothetical protein SEEM180_21284 [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322687757|gb|EFY83724.1| hypothetical protein SEEM600_15101 [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323131580|gb|ADX19010.1| putative methyltransferase [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|323195569|gb|EFZ80746.1| hypothetical protein SEEM581_10365 [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323199750|gb|EFZ84840.1| hypothetical protein SEEM501_16925 [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323202502|gb|EFZ87542.1| hypothetical protein SEEM460_17515 [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323208010|gb|EFZ92956.1| hypothetical protein SEEM020_19120 [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323212438|gb|EFZ97255.1| hypothetical protein SEEM6152_09418 [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323215080|gb|EFZ99828.1| hypothetical protein SEEM0077_03979 [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323222810|gb|EGA07175.1| hypothetical protein SEEM0047_10235 [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323224109|gb|EGA08402.1| hypothetical protein SEEM0055_22230 [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323230433|gb|EGA14551.1| hypothetical protein SEEM0052_19234 [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323235215|gb|EGA19301.1| hypothetical protein SEEM3312_06753 [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323239256|gb|EGA23306.1| hypothetical protein SEEM5258_06640 [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323244386|gb|EGA28392.1| hypothetical protein SEEM1156_00567 [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323247003|gb|EGA30969.1| SAM-dependent 23S ribosomal RNA mG1835 methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323254064|gb|EGA37884.1| SAM-dependent 23S ribosomal RNA mG1835 methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323256179|gb|EGA39915.1| SAM-dependent 23S ribosomal RNA mG1835 methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323262645|gb|EGA46201.1| hypothetical protein SEEM8284_02766 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323267259|gb|EGA50743.1| SAM-dependent 23S ribosomal RNA mG1835 methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323269339|gb|EGA52794.1| SAM-dependent 23S ribosomal RNA mG1835 methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] gi|332990085|gb|AEF09068.1| putative methyltransferase [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 378 Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust. Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 4/91 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN--GVSERFDTLQSDWF 158 I+DLG G G + L+LL ++P V VD S A++ ++ N TN ER + + ++ Sbjct: 232 IVDLGCGNGVIGLSLLAKNPQANVVFVDESPMAVDSSRLNVETNLPEAFERCEFMINNAL 291 Query: 159 SSVEGL-FDVIVSNPPYIES-VIVDCLGLEV 187 S VE F+ + NPP+ + + D + E+ Sbjct: 292 SGVEPFRFNAVFCNPPFHQKHALTDNIAWEM 322 >gi|328950160|ref|YP_004367495.1| Methyltransferase type 11 [Marinithermus hydrothermalis DSM 14884] gi|328450484|gb|AEB11385.1| Methyltransferase type 11 [Marinithermus hydrothermalis DSM 14884] Length = 216 Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust. Identities = 30/73 (41%), Positives = 39/73 (53%), Gaps = 8/73 (10%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT-NGVSERFDTLQSDWF 158 R+LDLGTGTG + L + GVD+S K L+ AK+ T V F+ L Sbjct: 49 RVLDLGTGTGNLAGRFLDRG--VEVTGVDLSQKMLQRAKAKYPTLETVEGHFEDL----- 101 Query: 159 SSVEGLFDVIVSN 171 S V GL+D IVS+ Sbjct: 102 SRVRGLYDAIVSS 114 >gi|259487544|tpe|CBF86301.1| TPA: TAM domain methyltransferase, putative (AFU_orthologue; AFUA_2G15860) [Aspergillus nidulans FGSC A4] Length = 373 Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust. Identities = 46/164 (28%), Positives = 67/164 (40%), Gaps = 24/164 (14%) Query: 14 VTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWR-DFYNV--------R 64 V S + D DSV D F T VR +E+ R +R Y + R Sbjct: 55 VLQTSDEDSLYDADSVADSSLSFAST---VRDYYYENGRRYHAYRYGQYPIPNDEEEQDR 111 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L ++ F+ LL L + P ++ RILD+GTGTGA L + ++ P + Sbjct: 112 LNITHHLFK------LLTGGDL-YRTPLAQQPAPKRILDIGTGTGAWALEMAEQFPEAEI 164 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVI 168 +G D+S + N D +SDW S + FD I Sbjct: 165 IGTDLSPIQPSFSPPNCTFI-----IDDAESDWAFSKDEPFDYI 203 >gi|254818552|ref|ZP_05223553.1| hypothetical protein MintA_01441 [Mycobacterium intracellulare ATCC 13950] Length = 250 Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust. Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 2/69 (2%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LD GTG G A+ S + G+D S A+E A++NA GVS F+ + Sbjct: 54 VLDPGTGPG--HHAIYYASKGYSATGIDGSAGAIERARANAEKAGVSVNFEVADATKLDG 111 Query: 161 VEGLFDVIV 169 +G FD +V Sbjct: 112 FDGHFDTVV 120 >gi|300709256|ref|XP_002996794.1| hypothetical protein NCER_100053 [Nosema ceranae BRL01] gi|239606119|gb|EEQ83123.1| hypothetical protein NCER_100053 [Nosema ceranae BRL01] Length = 196 Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust. Identities = 32/82 (39%), Positives = 46/82 (56%), Gaps = 16/82 (19%) Query: 100 RILDLGTGTGAVCLALLKESPFFKG---VGVDISCKALEIAKSNA-VTNGVSERFDTLQS 155 RILDL GTG + A+ FF VGVDI +A++I K N N V D +++ Sbjct: 51 RILDLCCGTGMLSAAV----SFFNPSTIVGVDIDYEAIKIYKENLDHLNNV----DIVKA 102 Query: 156 DWFSSVE---GLFDVIVSNPPY 174 D F+++E G FD ++ NPP+ Sbjct: 103 D-FNNLEFRSGFFDTVIMNPPF 123 >gi|229030573|ref|ZP_04186608.1| Methyltransferase type 11 [Bacillus cereus AH1271] gi|228730740|gb|EEL81685.1| Methyltransferase type 11 [Bacillus cereus AH1271] Length = 261 Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust. Identities = 24/61 (39%), Positives = 37/61 (60%), Gaps = 4/61 (6%) Query: 86 LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG-VGVDISCKALEIAKSNAVTN 144 L + + ++E R R+LD+ TG G V L +PFFK V +D++ K LE AK+ ++N Sbjct: 30 LQYVVQQVESRHNYRLLDIATGGGHVANLL---APFFKEVVALDLTEKMLESAKNFIMSN 86 Query: 145 G 145 G Sbjct: 87 G 87 >gi|254173067|ref|ZP_04879741.1| 23S rRNA (uracil-5-)-methyltransferase [Thermococcus sp. AM4] gi|214033223|gb|EEB74051.1| 23S rRNA (uracil-5-)-methyltransferase [Thermococcus sp. AM4] Length = 418 Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust. Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 4/77 (5%) Query: 97 DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 D R+LDL +G G + L K F+ G++I+ A+E+A NA NGV+ +F +++ Sbjct: 280 DGERVLDLYSGVGTFGVYLAKRG--FRVEGIEINPFAVEMANRNAKLNGVNAQFRVGRAE 337 Query: 157 WFSSVEGLFDVIVSNPP 173 + G +D ++ +PP Sbjct: 338 --ETPIGDYDTVIVDPP 352 >gi|150399401|ref|YP_001323168.1| hypothetical protein Mevan_0650 [Methanococcus vannielii SB] gi|150012104|gb|ABR54556.1| protein of unknown function DUF890 [Methanococcus vannielii SB] Length = 268 Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust. Identities = 33/132 (25%), Positives = 59/132 (44%), Gaps = 18/132 (13%) Query: 52 HRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAV 111 + I + + + + D P P ++ L + I+K+ + +L++GTG+G + Sbjct: 46 YNIAILKGVFGLDMDFHEDALIPTP-----INRYLFINEVFIKKQGIKSVLEIGTGSGIL 100 Query: 112 CLALLKESPFFKG--VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL----- 164 + + K +F D + L+IA N N +S D L S +EG+ Sbjct: 101 SIMIAK---YFNSRCTATDTLNEYLDIAMENICKNKLSNEIDLLNSKG-KIIEGIAELTG 156 Query: 165 --FDVIVSNPPY 174 FD+I+S PPY Sbjct: 157 KKFDLIISYPPY 168 >gi|241761758|ref|ZP_04759844.1| Cyclopropane-fatty-acyl-phospholipid synthase [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|260752518|ref|YP_003225411.1| Cyclopropane-fatty-acyl-phospholipid synthase [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|241373672|gb|EER63232.1| Cyclopropane-fatty-acyl-phospholipid synthase [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|258551881|gb|ACV74827.1| Cyclopropane-fatty-acyl-phospholipid synthase [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 415 Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust. Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 9/90 (10%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 RILD+G G G + L L + + +GV +S + L+IA+ A G+ +R D + Sbjct: 178 RILDIGCGWGGMAL-FLGQIADVEVLGVTLSEEQLKIARKRAKEAGLDDRVKFQLID-YR 235 Query: 160 SVEGLFDVIVS-------NPPYIESVIVDC 182 V+G FD IVS PPY ++ C Sbjct: 236 EVKGRFDRIVSVGMFEHVGPPYYKNFFNHC 265 >gi|88802687|ref|ZP_01118214.1| hypothetical protein PI23P_08855 [Polaribacter irgensii 23-P] gi|88781545|gb|EAR12723.1| hypothetical protein PI23P_08855 [Polaribacter irgensii 23-P] Length = 242 Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust. Identities = 39/152 (25%), Positives = 65/152 (42%), Gaps = 15/152 (9%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW--- 157 ILD+G GTG + L L + S V++ A E + N + +R + + Sbjct: 43 ILDIGAGTGVLSLMLAQRSDAMTIDAVELDENAYEQSVENFENSDWGDRLYCYNASFQEF 102 Query: 158 ---FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214 S E +D+IVSNPP+ + D + +S + + GVS Sbjct: 103 VAEISIEEETYDLIVSNPPFYTDTF--------KTLDEARNKARFTSSMS-FEELLLGVS 153 Query: 215 RHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246 + L++ G SV I + +K + + + KLFL Sbjct: 154 KILSETGCFSVIIPFKEKANFIALAGENKLFL 185 >gi|269140490|ref|YP_003297191.1| ribosomal protein L11 methyltransferase [Edwardsiella tarda EIB202] gi|267986151|gb|ACY85980.1| ribosomal protein L11 methyltransferase [Edwardsiella tarda EIB202] gi|304560281|gb|ADM42945.1| Ribosomal protein L11 methyltransferase [Edwardsiella tarda FL6-60] Length = 293 Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust. Identities = 25/72 (34%), Positives = 43/72 (59%), Gaps = 4/72 (5%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159 ++D G G+G + +A LK + +G+DI +A++ ++ NA NGVSER + L D + Sbjct: 162 VIDFGCGSGILAIAALKLG-AARAIGIDIDPQAIQASRDNAERNGVSERLELYLPKDQPA 220 Query: 160 SVEGLFDVIVSN 171 + DV+V+N Sbjct: 221 DLSA--DVVVAN 230 >gi|189195984|ref|XP_001934330.1| hypothetical protein PTRG_03997 [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187980209|gb|EDU46835.1| hypothetical protein PTRG_03997 [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 438 Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust. Identities = 44/185 (23%), Positives = 80/185 (43%), Gaps = 41/185 (22%) Query: 49 ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVD--SALAFSLPRIEKRDVVRILDLGT 106 + + +LG F ++ + PR +T V + L + P + +R+LDL T Sbjct: 74 KPLQYLLGSEYFGDLEIRCKPGVLIPRADTAASVTHLAGLLQNAPNLPPE--LRVLDLCT 131 Query: 107 GTGAVCLALL--------KESPFFKGVGVDISCKALEIA--------------------- 137 GTG C+ LL + + +G+DIS KA+ +A Sbjct: 132 GTG--CIPLLFKYQLSSARNDISLRLLGIDISPKAIGLAAKNLRRLQKHGQLNTQGNFDF 189 Query: 138 -KSNAVTNGVSERFDTLQSDW----FSSVEGLFDVIVSNPPYI-ESVIVDCLGLEVRDFD 191 ++N + N E+ + + S ++ + +D+++SNPPYI S VR F+ Sbjct: 190 LRANVMINPFVEQTEGIPSVKAALNYALMPSFWDILISNPPYISPSEFWKTTTRSVRGFE 249 Query: 192 PRISL 196 P+++L Sbjct: 250 PKLAL 254 >gi|254248615|ref|ZP_04941935.1| SAM-dependent methyltransferase [Burkholderia cenocepacia PC184] gi|124875116|gb|EAY65106.1| SAM-dependent methyltransferase [Burkholderia cenocepacia PC184] Length = 282 Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust. Identities = 21/53 (39%), Positives = 32/53 (60%), Gaps = 1/53 (1%) Query: 99 VRILDLGTGTGAVCLALLKE-SPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150 R+LD+G GTGAV LA+ + + G+DIS + ++ A++ A GV RF Sbjct: 50 TRVLDVGCGTGAVTLAIARRLGASAQCTGIDISARMIDAARARAERGGVPARF 102 >gi|309792423|ref|ZP_07686889.1| putative RNA methylase [Oscillochloris trichoides DG6] gi|308225533|gb|EFO79295.1| putative RNA methylase [Oscillochloris trichoides DG6] Length = 352 Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust. Identities = 28/99 (28%), Positives = 51/99 (51%), Gaps = 9/99 (9%) Query: 82 VDSALAFSLPRIEKRDVV-RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140 ++ A+A ++ R+ D R L++G G+G++ + L P + +G DI AL +K+N Sbjct: 183 LNGAVAHAMARLSLPDPTDRFLNIGCGSGSLLIERLLIGPTRRAIGCDIDPAALRCSKAN 242 Query: 141 AVTNGVSER-----FDTLQSDWFSSVEGLFDVIVSNPPY 174 G+SER +D Q ++ D IV++ P+ Sbjct: 243 VEAAGLSERCQLELWDACQLPLHNAS---MDAIVADLPF 278 >gi|284036603|ref|YP_003386533.1| RNA methyltransferase, TrmA family [Spirosoma linguale DSM 74] gi|283815896|gb|ADB37734.1| RNA methyltransferase, TrmA family [Spirosoma linguale DSM 74] Length = 476 Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust. Identities = 33/147 (22%), Positives = 69/147 (46%), Gaps = 15/147 (10%) Query: 40 NAIVRSLKHESIH--RILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR- 96 N I+ + K++S ++ W + + + TF P++ ++ A++L ++ + Sbjct: 265 NYILNTKKNDSYQDQEVVNWAGKPYIEEQMEALTFRIGPKSFYQTNAQQAYNLYKVAREF 324 Query: 97 ----DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER--- 149 R+ DL TGTG + L + + + VGV+ ++ A+ NA NG++ Sbjct: 325 AGLTGQERVYDLYTGTGTIALFVARLAKHV--VGVEYVEASVADARVNAQVNGIANTTFV 382 Query: 150 ---FDTLQSDWFSSVEGLFDVIVSNPP 173 + +D F + G DV++++PP Sbjct: 383 AGDMKAILTDEFFAEHGRPDVVITDPP 409 >gi|255659182|ref|ZP_05404591.1| putative SAM-dependent methyltransferase [Mitsuokella multacida DSM 20544] gi|260848633|gb|EEX68640.1| putative SAM-dependent methyltransferase [Mitsuokella multacida DSM 20544] Length = 257 Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust. Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 4/71 (5%) Query: 101 ILDLGTGTGAVCLALLKESPF-FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ILD+GTG G L L +P + +GVD+S K ++ A+ N + GV RF + + Sbjct: 69 ILDIGTGAGFFPLLL---APLGHEVIGVDLSEKMVQEARKNCLAAGVPARFRKMDAQALD 125 Query: 160 SVEGLFDVIVS 170 + FDVI+S Sbjct: 126 FADESFDVILS 136 >gi|70733157|ref|YP_262930.1| hypothetical protein PFL_5872 [Pseudomonas fluorescens Pf-5] gi|68347456|gb|AAY95062.1| conserved hypothetical protein [Pseudomonas fluorescens Pf-5] Length = 398 Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust. Identities = 43/142 (30%), Positives = 65/142 (45%), Gaps = 35/142 (24%) Query: 100 RILDLGT--GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 R+LDL + G V A S F VD S AL+ + NA NG +E+ ++ D Sbjct: 223 RVLDLYSYIGGWGVQAAAFGASEVF---CVDASAFALDGVERNAALNGFAEKMTCIEGDV 279 Query: 158 FSSVEGL------FDVIVSNPP-YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210 F +++ L FDVIV++PP +I+ R D + +G YR + Sbjct: 280 FEALKELKASEERFDVIVADPPAFIK-----------RKKDLK-------NGEGAYRRLN 321 Query: 211 DGVSRHLNKDGL-----CSVEI 227 + R LNKDG+ CS+ + Sbjct: 322 EQAMRLLNKDGILVSASCSMHL 343 >gi|67523419|ref|XP_659769.1| hypothetical protein AN2165.2 [Aspergillus nidulans FGSC A4] gi|40745053|gb|EAA64209.1| hypothetical protein AN2165.2 [Aspergillus nidulans FGSC A4] Length = 371 Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust. Identities = 46/164 (28%), Positives = 67/164 (40%), Gaps = 24/164 (14%) Query: 14 VTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWR-DFYNV--------R 64 V S + D DSV D F T VR +E+ R +R Y + R Sbjct: 53 VLQTSDEDSLYDADSVADSSLSFAST---VRDYYYENGRRYHAYRYGQYPIPNDEEEQDR 109 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L ++ F+ LL L + P ++ RILD+GTGTGA L + ++ P + Sbjct: 110 LNITHHLFK------LLTGGDL-YRTPLAQQPAPKRILDIGTGTGAWALEMAEQFPEAEI 162 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVI 168 +G D+S + N D +SDW S + FD I Sbjct: 163 IGTDLSPIQPSFSPPNCTFI-----IDDAESDWAFSKDEPFDYI 201 >gi|262037227|ref|ZP_06010710.1| methyltransferase small [Leptotrichia goodfellowii F0264] gi|261748747|gb|EEY36103.1| methyltransferase small [Leptotrichia goodfellowii F0264] Length = 201 Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust. Identities = 21/73 (28%), Positives = 42/73 (57%), Gaps = 1/73 (1%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LD+G G G V + L P D++ +ALE+++ N + +++ + ++S F + Sbjct: 64 VLDIGCGYGIVSVVLKTFYPLSSVTLSDVNERALELSEENLKNHNIND-YKIVKSFAFDN 122 Query: 161 VEGLFDVIVSNPP 173 + +D+I+SNPP Sbjct: 123 ISDKYDIIMSNPP 135 >gi|17552558|ref|NP_497990.1| hypothetical protein C38D4.9 [Caenorhabditis elegans] gi|3874828|emb|CAA86320.1| C. elegans protein C38D4.9, confirmed by transcript evidence [Caenorhabditis elegans] Length = 214 Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust. Identities = 26/79 (32%), Positives = 38/79 (48%), Gaps = 4/79 (5%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 +++D+G G G + +GVDI +AL+I N T V +R + LQ+D Sbjct: 50 KLIDIGCGCGMLMTTAATMYELETVLGVDIDDEALKICSRNLETAEVQDRCELLQADILD 109 Query: 160 S----VEGLFDVIVSNPPY 174 G FDV V NPP+ Sbjct: 110 PESDLPRGTFDVAVINPPF 128 >gi|260771155|ref|ZP_05880082.1| predicted O-methyltransferase [Vibrio furnissii CIP 102972] gi|260613752|gb|EEX38944.1| predicted O-methyltransferase [Vibrio furnissii CIP 102972] Length = 239 Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust. Identities = 24/76 (31%), Positives = 33/76 (43%), Gaps = 1/76 (1%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF- 158 ILD+GTGTG + L + P VDI A A N + + R Q + Sbjct: 45 HILDIGTGTGLLALMCAQRFPQASITAVDIDEHAFHAASHNVAHSPWANRIQVAQQNILQ 104 Query: 159 SSVEGLFDVIVSNPPY 174 + + D I+ NPPY Sbjct: 105 TQLNTPVDAIICNPPY 120 >gi|300781027|ref|ZP_07090881.1| exopolyphosphatase [Corynebacterium genitalium ATCC 33030] gi|300532734|gb|EFK53795.1| exopolyphosphatase [Corynebacterium genitalium ATCC 33030] Length = 505 Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust. Identities = 36/125 (28%), Positives = 54/125 (43%), Gaps = 4/125 (3%) Query: 52 HRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAV 111 H I G F + S P P+ L V +A L V +LDLGTG+G Sbjct: 106 HIIAGADRFIFSDMDASVTEHVPGPDHVLGVGAASLSLLSATPLTPVGTVLDLGTGSGVQ 165 Query: 112 CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVS 170 LA + D+ +AL++A + ++ + + WF V G FD IV+ Sbjct: 166 ALAQAGTAQHV--TATDVHPRALDLAAATMAGADIT-NVELREGPWFDLVAGQRFDRIVA 222 Query: 171 NPPYI 175 NPP++ Sbjct: 223 NPPFV 227 >gi|251791403|ref|YP_003006124.1| ribosomal protein L11 methyltransferase [Dickeya zeae Ech1591] gi|247540024|gb|ACT08645.1| ribosomal protein L11 methyltransferase [Dickeya zeae Ech1591] Length = 295 Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust. Identities = 35/108 (32%), Positives = 55/108 (50%), Gaps = 17/108 (15%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159 ++D G G+G + +A LK +G+DI +A++ ++ NA NGVSER + L D + Sbjct: 162 VIDFGCGSGILAIAALKLG-AAHAIGIDIDPQAIQASRDNAQRNGVSERLELYLPKDQPN 220 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL---DGGIDGLS 204 + DV+V+N L +R+ P IS+ GG GLS Sbjct: 221 DLSA--DVVVAN----------ILAGPLRELAPLISVLPKTGGHLGLS 256 >gi|187731581|ref|YP_001881356.1| putative methyltransferase [Shigella boydii CDC 3083-94] gi|262828745|sp|B2TYI8|TRMN6_SHIB3 RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName: Full=tRNA m6A37 methyltransferase gi|262831193|sp|Q31XR1|TRMN6_SHIBS RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName: Full=tRNA m6A37 methyltransferase gi|187428573|gb|ACD07847.1| putative methyltransferase [Shigella boydii CDC 3083-94] gi|320175855|gb|EFW50936.1| putative methyltransferase [Shigella dysenteriae CDC 74-1112] gi|320186376|gb|EFW61110.1| putative methyltransferase [Shigella flexneri CDC 796-83] Length = 245 Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust. Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 5/89 (5%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 V R LD+G G+G + L L + + + V++ +A A+ N + +ER + +D Sbjct: 45 VKRCLDIGAGSGLLALMLAQRTSDSVIIDAVELESEAAAQAQENINQSPWAERINVHTAD 104 Query: 157 ---WFSSVEGLFDVIVSNPPYIESVIVDC 182 W + FD+I+SNPPY + V+C Sbjct: 105 IQQWLTQQTVRFDLIISNPPYYQQG-VEC 132 >gi|262163924|ref|ZP_06031663.1| predicted O-methyltransferase [Vibrio mimicus VM223] gi|262027452|gb|EEY46118.1| predicted O-methyltransferase [Vibrio mimicus VM223] Length = 239 Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust. Identities = 37/149 (24%), Positives = 60/149 (40%), Gaps = 14/149 (9%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD---W 157 ILD+G GTG + L + + +DI A + + N+ + + R LQ+D W Sbjct: 46 ILDIGCGTGLLSLMCAQRFQSAQITALDIEPSAYQATEKNSENSPWANRIQCLQADVRYW 105 Query: 158 FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217 F I+ NPPY S G + F + G L H I + + + L Sbjct: 106 HPPQR--FSAIICNPPYFNS------GETAQQFARATARHTG--SLKHQELI-ECLPQLL 154 Query: 218 NKDGLCSVEIGYNQKVDVVRIFESRKLFL 246 DG+ S + + + + E L+L Sbjct: 155 EPDGVASFILPKTEGDQFIALAEQAGLYL 183 >gi|239928351|ref|ZP_04685304.1| hypothetical protein SghaA1_09003 [Streptomyces ghanaensis ATCC 14672] gi|291436678|ref|ZP_06576068.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672] gi|291339573|gb|EFE66529.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672] Length = 489 Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust. Identities = 22/52 (42%), Positives = 30/52 (57%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 R+LDLG G G + LL++ F + VGVD+S +AL IA + V ER Sbjct: 301 AARVLDLGCGQGQLVQELLRDPSFTEIVGVDVSMRALTIASRRLRLDRVGER 352 >gi|240144623|ref|ZP_04743224.1| SAM-dependent methyltransferase [Roseburia intestinalis L1-82] gi|257203339|gb|EEV01624.1| SAM-dependent methyltransferase [Roseburia intestinalis L1-82] gi|291540315|emb|CBL13426.1| Predicted O-methyltransferase [Roseburia intestinalis XB6B4] Length = 246 Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust. Identities = 23/80 (28%), Positives = 46/80 (57%), Gaps = 4/80 (5%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD--W 157 R+LDLGTGTG + + + ++ ++I ++ ++A+ + N + ++ + + D Sbjct: 49 RVLDLGTGTGIIPILMEAKTEAEDFKALEIQEESADMARRSVCYNHLEDKIEIVTGDIKE 108 Query: 158 FSSVEGL--FDVIVSNPPYI 175 S++ G FDVI +NPPY+ Sbjct: 109 ASAIFGASSFDVITTNPPYM 128 >gi|197262741|ref|ZP_03162815.1| methyltransferase family protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197240996|gb|EDY23616.1| methyltransferase family protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] Length = 378 Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust. Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 4/91 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN--GVSERFDTLQSDWF 158 I+DLG G G + L+LL ++P V VD S A++ ++ N TN ER + + ++ Sbjct: 232 IVDLGCGNGVIGLSLLAKNPQANVVFVDESPMAVDSSRLNVETNLPEAFERCEFMINNAL 291 Query: 159 SSVEGL-FDVIVSNPPYIES-VIVDCLGLEV 187 S VE F+ + NPP+ + + D + E+ Sbjct: 292 SGVEPFRFNAVFCNPPFHQKHALTDNIAWEM 322 >gi|73668549|ref|YP_304564.1| type I restriction-modification system methyltransferase subunit [Methanosarcina barkeri str. Fusaro] gi|72395711|gb|AAZ69984.1| type I restriction-modification system methyltransferase subunit [Methanosarcina barkeri str. Fusaro] Length = 680 Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust. Identities = 34/116 (29%), Positives = 56/116 (48%), Gaps = 14/116 (12%) Query: 72 FEPRPETELLVDSALAFSLPRIEKRDVVR-ILDLGTGTGAVCLALLKE--------SPFF 122 F PR L+V+ L+ ++ + +VR + D GTG + L + KE + Sbjct: 178 FTPREVIRLMVNLLLSQDQEKLAQNHIVRTVYDPACGTGGM-LTIAKEHILDHINPNANI 236 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG----LFDVIVSNPPY 174 K G +++ K I+KS+ + G + D ++ D S +G FD I+SNPPY Sbjct: 237 KLFGQEVNDKTFAISKSDMLIKGDDKDADNIKPDSSFSKDGHAGETFDYILSNPPY 292 >gi|315653117|ref|ZP_07906042.1| methyltransferase domain protein [Lactobacillus iners ATCC 55195] gi|315489482|gb|EFU79119.1| methyltransferase domain protein [Lactobacillus iners ATCC 55195] Length = 204 Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust. Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 3/75 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 ILD+GTG G + L K P + +DI+ +AL +AK NA N + + + SD + + Sbjct: 65 ILDVGTGYGPLGLFAAKLWPKSRVTMIDINERALALAKRNAQLNEI-DNVNIFSSDCYRN 123 Query: 161 V--EGLFDVIVSNPP 173 + + F +I++NPP Sbjct: 124 LDEQEQFGLILTNPP 138 >gi|295694828|ref|YP_003588066.1| methyltransferase small [Bacillus tusciae DSM 2912] gi|295410430|gb|ADG04922.1| methyltransferase small [Bacillus tusciae DSM 2912] Length = 210 Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust. Identities = 30/85 (35%), Positives = 45/85 (52%), Gaps = 5/85 (5%) Query: 93 IEKRDVV---RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 IE DV R+LDLG G G + +A P + DI+ +A+E+AK NA + +R Sbjct: 50 IESMDVPKRGRVLDLGCGYGPIGIAAALLEPGVQVTMADINERAVELAKENARRLRL-QR 108 Query: 150 FDTLQSDWFSSV-EGLFDVIVSNPP 173 + SD F+ + + FD + NPP Sbjct: 109 VEVYVSDGFAGLGDRRFDRVYCNPP 133 >gi|262193421|ref|YP_003264630.1| ribosomal L11 methyltransferase [Haliangium ochraceum DSM 14365] gi|262076768|gb|ACY12737.1| ribosomal L11 methyltransferase [Haliangium ochraceum DSM 14365] Length = 303 Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust. Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 1/80 (1%) Query: 92 RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151 R +V R D+G G+G + +A P GV VDI A + N NG+SER Sbjct: 149 RARGVEVQRCFDVGCGSGILFIAAAGMWPACSGVAVDIDPLAADATLENCERNGLSERV- 207 Query: 152 TLQSDWFSSVEGLFDVIVSN 171 + + V+G+FD++++N Sbjct: 208 AVSTTPTEEVDGVFDLVLAN 227 >gi|300868788|ref|ZP_07113397.1| conserved exported hypothetical protein [Oscillatoria sp. PCC 6506] gi|300333224|emb|CBN58589.1| conserved exported hypothetical protein [Oscillatoria sp. PCC 6506] Length = 230 Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust. Identities = 24/71 (33%), Positives = 41/71 (57%), Gaps = 3/71 (4%) Query: 90 LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 L ++ DVV DLG+G G + +A ++ +G+G+DI+ + + A NA GVS+R Sbjct: 92 LANVQSNDVV--YDLGSGDGRIVIAAAQKV-GARGIGIDINPERIREANENAQKAGVSDR 148 Query: 150 FDTLQSDWFSS 160 + Q+D F + Sbjct: 149 VEFRQADLFQT 159 >gi|261346502|ref|ZP_05974146.1| ribosomal RNA small subunit methyltransferase [Providencia rustigianii DSM 4541] gi|282565493|gb|EFB71028.1| ribosomal RNA small subunit methyltransferase [Providencia rustigianii DSM 4541] Length = 337 Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust. Identities = 22/79 (27%), Positives = 40/79 (50%), Gaps = 2/79 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 +LDL G G + + ++P D+S AL+ A + N ++ + + SD +S Sbjct: 199 NVLDLACGNGVLAAVVGSQNPNVTLTLSDVSSAALDSATATLAANKLTGKI--IPSDVYS 256 Query: 160 SVEGLFDVIVSNPPYIESV 178 + FD I+SNPP+ + + Sbjct: 257 EINDKFDWIISNPPFHDGI 275 >gi|2879819|emb|CAA41480.1| hypothetical protein [Pseudoalteromonas haloplanktis] Length = 232 Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust. Identities = 30/77 (38%), Positives = 40/77 (51%), Gaps = 6/77 (7%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN---GVSERFDTLQSDW 157 +LD+GTGTG + L + S V+I A A N + +S T+QS Sbjct: 39 LLDIGTGTGLLALMCKQRSSELDITAVEIDESAYTQALQNVANSPWPTISITHQTIQS-- 96 Query: 158 FSSVEGLFDVIVSNPPY 174 FSS E FDV++SNPPY Sbjct: 97 FSS-EVKFDVVISNPPY 112 >gi|325969180|ref|YP_004245372.1| methyltransferase [Vulcanisaeta moutnovskia 768-28] gi|323708383|gb|ADY01870.1| methyltransferase [Vulcanisaeta moutnovskia 768-28] Length = 200 Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust. Identities = 30/119 (25%), Positives = 53/119 (44%), Gaps = 7/119 (5%) Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 +++ + S+ + P E L + + +RI+D+G+GTG + L L E Sbjct: 3 MKIIVLSNVYPP-AEDSWQTAELLRWVMSNHANDGYLRIIDVGSGTGILALTALNEIVSK 61 Query: 123 KG----VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF--DVIVSNPPYI 175 G + D A + N V NG+ D + + ++ F D++VSNPPY+ Sbjct: 62 GGTAWVLAADHDYNASMNTRINLVNNGLYHYADVITMNLLDAIRTRFCLDIVVSNPPYL 120 >gi|307265689|ref|ZP_07547242.1| putative RNA methylase [Thermoanaerobacter wiegelii Rt8.B1] gi|306919333|gb|EFN49554.1| putative RNA methylase [Thermoanaerobacter wiegelii Rt8.B1] Length = 248 Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust. Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 12/84 (14%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 +I+DLG G+G + + + ++ GV+I ++A + V N + ER ++ D Sbjct: 45 KIVDLGCGSGIIPILIAAKTQDTFIYGVEIQEDMADMATRSVVINKMEERIKIIKGD--- 101 Query: 160 SVEGL--------FDVIVSNPPYI 175 V GL FD++ SNPPY+ Sbjct: 102 -VRGLEKILGYEKFDIVTSNPPYM 124 >gi|169825840|ref|YP_001695998.1| putative RNA methyltransferase [Lysinibacillus sphaericus C3-41] gi|168990328|gb|ACA37868.1| Hypothetical RNA methyltransferase [Lysinibacillus sphaericus C3-41] Length = 459 Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust. Identities = 44/154 (28%), Positives = 79/154 (51%), Gaps = 29/154 (18%) Query: 41 AIVRSLKHESIHRILG------W-RDFY-----NVRLTLSSDTF-EPRPE-TELLVDSAL 86 +I++++ HE + I G W +D +VR +S+ +F + PE TE+L AL Sbjct: 246 SIMQNVNHEKTNVIFGDDTLNLWGKDVIIDTIGDVRFEISARSFYQVNPEQTEVLYKQAL 305 Query: 87 AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146 ++ + ++R ++D G G + L L +++ +GV+I +A+E AK NAV NG Sbjct: 306 DYANLQGDER----VIDAYCGIGTISLFLAQKARAV--MGVEIVPQAIEDAKRNAVLNGF 359 Query: 147 SERF------DTLQSDWFSSVEGL-FDVIVSNPP 173 + + + + W+ EG DV+V +PP Sbjct: 360 TNTYFEAGPAEEVIPRWYK--EGKEADVLVVDPP 391 >gi|309784610|ref|ZP_07679245.1| methyltransferase small domain protein [Shigella dysenteriae 1617] gi|262831201|sp|Q32CU6|TRMN6_SHIDS RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName: Full=tRNA m6A37 methyltransferase gi|308927507|gb|EFP72979.1| methyltransferase small domain protein [Shigella dysenteriae 1617] Length = 245 Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust. Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 5/89 (5%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 V R LD+G G+G + L L + + + V++ +A A+ N + +ER + +D Sbjct: 45 VKRCLDIGAGSGLLALMLAQRTDDSVMIDAVELESEAAAQAQENINQSPWAERINVHTAD 104 Query: 157 ---WFSSVEGLFDVIVSNPPYIESVIVDC 182 W + FD+I+SNPPY + V+C Sbjct: 105 IQQWITQQTVRFDLIISNPPYYQQG-VEC 132 >gi|229505717|ref|ZP_04395227.1| predicted O-methyltransferase [Vibrio cholerae BX 330286] gi|229357940|gb|EEO22857.1| predicted O-methyltransferase [Vibrio cholerae BX 330286] Length = 240 Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust. Identities = 26/80 (32%), Positives = 36/80 (45%), Gaps = 5/80 (6%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD---W 157 ILD+G GTG + L + P +DI A A+ N + +ER + +D W Sbjct: 46 ILDIGCGTGLLSLMCAQRFPHAHITALDIEQTAYLAAEHNRQQSPWAERIECQHADILHW 105 Query: 158 FSSVEGLFDVIVSNPPYIES 177 S F I+ NPPY S Sbjct: 106 QPSKR--FAAIICNPPYFNS 123 >gi|212697151|ref|ZP_03305279.1| hypothetical protein ANHYDRO_01717 [Anaerococcus hydrogenalis DSM 7454] gi|212675926|gb|EEB35533.1| hypothetical protein ANHYDRO_01717 [Anaerococcus hydrogenalis DSM 7454] Length = 547 Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust. Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 8/90 (8%) Query: 87 AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146 A L ++K ILDL +GTG + K + K +G++I +A+E A NA N + Sbjct: 303 AIELANVDKNK--NILDLYSGTGTITQLFAKSAN--KAMGIEIVEEAVEKAFDNAKENQI 358 Query: 147 SERFDTLQSDWFSS---VEGLFDVIVSNPP 173 E D + D V+G +D++V +PP Sbjct: 359 -ENIDFIAGDVLEKINLVKGKYDIVVLDPP 387 >gi|157371913|ref|YP_001479902.1| methyltransferase small [Serratia proteamaculans 568] gi|262828677|sp|A8GI34|TRMN6_SERP5 RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName: Full=tRNA m6A37 methyltransferase gi|157323677|gb|ABV42774.1| methyltransferase small [Serratia proteamaculans 568] Length = 260 Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust. Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 4/85 (4%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 R+LD+G+G+G + L L + + + V++ A A N + + S R D Sbjct: 61 RVLDIGSGSGLIALMLAQRTAENVQIDAVELDEAAAAQAHDNVLESPWSLRIQVHAQDIH 120 Query: 159 SSVE---GLFDVIVSNPPYIESVIV 180 + G +D+IVSNPPY E + Sbjct: 121 HFAQHHAGQYDLIVSNPPYFEPAVA 145 >gi|326389210|ref|ZP_08210778.1| RNA methylase [Thermoanaerobacter ethanolicus JW 200] gi|325994573|gb|EGD52997.1| RNA methylase [Thermoanaerobacter ethanolicus JW 200] Length = 267 Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust. Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 12/84 (14%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 +I+DLG G+G + + + ++ GV+I ++A + V N + ER ++ D Sbjct: 64 KIVDLGCGSGIIPILIAAKTQDTFIYGVEIQEDMADMATRSVVINKMEERIKIIKGD--- 120 Query: 160 SVEGL--------FDVIVSNPPYI 175 V GL FD++ SNPPY+ Sbjct: 121 -VRGLEKILGYEKFDIVTSNPPYM 143 >gi|281602470|gb|ADA75454.1| hypothetical protein SFxv_3432 [Shigella flexneri 2002017] Length = 481 Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust. Identities = 30/97 (30%), Positives = 51/97 (52%), Gaps = 4/97 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS--ERFDTLQSDWF 158 I+DLG G G + L LL ++P K V VD S A+ ++ N TN +R + + ++ Sbjct: 335 IVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRSEFMINNAL 394 Query: 159 SSVEGL-FDVIVSNPPYIES-VIVDCLGLEVRDFDPR 193 S VE F+ ++ NPP+ + + D + E+ + R Sbjct: 395 SGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHYARR 431 >gi|110806967|ref|YP_690486.1| hypothetical protein SFV_3126 [Shigella flexneri 5 str. 8401] gi|110616515|gb|ABF05182.1| putative enzyme [Shigella flexneri 5 str. 8401] Length = 481 Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust. Identities = 30/97 (30%), Positives = 51/97 (52%), Gaps = 4/97 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS--ERFDTLQSDWF 158 I+DLG G G + L LL ++P K V VD S A+ ++ N TN +R + + ++ Sbjct: 335 IVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRSEFMINNAL 394 Query: 159 SSVEGL-FDVIVSNPPYIES-VIVDCLGLEVRDFDPR 193 S VE F+ ++ NPP+ + + D + E+ + R Sbjct: 395 SGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHYARR 431 >gi|303310641|ref|XP_003065332.1| hypothetical protein CPC735_045570 [Coccidioides posadasii C735 delta SOWgp] gi|240104994|gb|EER23187.1| hypothetical protein CPC735_045570 [Coccidioides posadasii C735 delta SOWgp] Length = 358 Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust. Identities = 40/126 (31%), Positives = 58/126 (46%), Gaps = 33/126 (26%) Query: 76 PETELLVDSALAFSLP--RIEKRDVVRILDLGTGTGAVCLALLKESPFFKG--VGVDISC 131 PE L +A F L R+ RILDLGTG G++ L LL+E F G VGVD S Sbjct: 130 PEKVLRFLTAEGFPLAPCNTSGREQPRILDLGTGNGSM-LTLLREEGGFLGDMVGVDYSE 188 Query: 132 KALEIAKSNAVTNGVS-------ERFDTLQS---------------------DWFSSVEG 163 +++E+A+ A +G E +D L + +WF + EG Sbjct: 189 RSVELARRLAGGDGGGQGRRIRFEVWDILAAGEGDDDDNDGSGGGNNGLDGLEWFPAAEG 248 Query: 164 LFDVIV 169 FD+++ Sbjct: 249 GFDIVL 254 >gi|169344693|ref|ZP_02865656.1| conserved hypothetical protein [Clostridium perfringens C str. JGS1495] gi|169297160|gb|EDS79274.1| conserved hypothetical protein [Clostridium perfringens C str. JGS1495] Length = 256 Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust. Identities = 27/97 (27%), Positives = 46/97 (47%), Gaps = 6/97 (6%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 VD+ L + + ++ V LDL TGTG + + + + VG++I + E+A +A Sbjct: 40 VDAVLLANFANVNRKHSV--LDLCTGTGIIPFIIYGKKNPKEAVGIEIQEEFAEMANRSA 97 Query: 142 VTNGVSERFD----TLQSDWFSSVEGLFDVIVSNPPY 174 N + ++ L+ S FDV+ NPPY Sbjct: 98 KINNIEDKVSFVCGDLKDKELSKSMPKFDVVTVNPPY 134 >gi|89109381|ref|AP_003161.1| predicted methyltransferase [Escherichia coli str. K-12 substr. W3110] gi|90111461|ref|NP_417070.2| tRNA (adenine-N(6)-)-methyltransferase [Escherichia coli str. K-12 substr. MG1655] gi|157162055|ref|YP_001459373.1| putative methyltransferase [Escherichia coli HS] gi|170019142|ref|YP_001724096.1| methyltransferase small [Escherichia coli ATCC 8739] gi|170082184|ref|YP_001731504.1| S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli str. K-12 substr. DH10B] gi|170679700|ref|YP_001744764.1| putative methyltransferase [Escherichia coli SMS-3-5] gi|188492006|ref|ZP_02999276.1| putative methyltransferase [Escherichia coli 53638] gi|194437703|ref|ZP_03069799.1| putative methyltransferase [Escherichia coli 101-1] gi|218706078|ref|YP_002413597.1| putative S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli UMN026] gi|238901740|ref|YP_002927536.1| putative S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli BW2952] gi|253772525|ref|YP_003035356.1| methyltransferase small [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254162550|ref|YP_003045658.1| putative S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli B str. REL606] gi|256021738|ref|ZP_05435603.1| predicted S-adenosyl-L-methionine-dependent methyltransferase [Escherichia sp. 4_1_40B] gi|297519406|ref|ZP_06937792.1| predicted S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli OP50] gi|307139212|ref|ZP_07498568.1| predicted S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli H736] gi|312973179|ref|ZP_07787351.1| methyltransferase small domain protein [Escherichia coli 1827-70] gi|331664143|ref|ZP_08365053.1| hypothetical protein ECMG_01291 [Escherichia coli TA143] gi|13638617|sp|P31825|TRMN6_ECOLI RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName: Full=tRNA m6A37 methyltransferase gi|262828123|sp|C5W7S9|TRMN6_ECOBB RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName: Full=tRNA m6A37 methyltransferase gi|262828135|sp|C6UBI3|TRMN6_ECOBR RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName: Full=tRNA m6A37 methyltransferase gi|262828142|sp|C4ZYJ8|TRMN6_ECOBW RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName: Full=tRNA m6A37 methyltransferase gi|262828150|sp|B1XBQ2|TRMN6_ECODH RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName: Full=tRNA m6A37 methyltransferase gi|262828154|sp|A8A386|TRMN6_ECOHS RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName: Full=tRNA m6A37 methyltransferase gi|262828219|sp|B1IVQ2|TRMN6_ECOLC RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName: Full=tRNA m6A37 methyltransferase gi|262828226|sp|B7N6G4|TRMN6_ECOLU RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName: Full=tRNA m6A37 methyltransferase gi|262828237|sp|B1LP88|TRMN6_ECOSM RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName: Full=tRNA m6A37 methyltransferase gi|85675466|dbj|BAE76751.1| predicted methyltransferase [Escherichia coli str. K12 substr. W3110] gi|87082131|gb|AAC75628.2| tRNA (adenine-N(6)-)-methyltransferase [Escherichia coli str. K-12 substr. MG1655] gi|157067735|gb|ABV06990.1| putative methyltransferase [Escherichia coli HS] gi|169754070|gb|ACA76769.1| methyltransferase small [Escherichia coli ATCC 8739] gi|169890019|gb|ACB03726.1| predicted S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli str. K-12 substr. DH10B] gi|170517418|gb|ACB15596.1| putative methyltransferase [Escherichia coli SMS-3-5] gi|188487205|gb|EDU62308.1| putative methyltransferase [Escherichia coli 53638] gi|194423509|gb|EDX39500.1| putative methyltransferase [Escherichia coli 101-1] gi|218433175|emb|CAR14073.1| putative S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli UMN026] gi|238863086|gb|ACR65084.1| predicted S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli BW2952] gi|242378175|emb|CAQ32950.1| tRNA m[6]A37 methyltransferase [Escherichia coli BL21(DE3)] gi|253323569|gb|ACT28171.1| methyltransferase small [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253974451|gb|ACT40122.1| predicted S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli B str. REL606] gi|253978618|gb|ACT44288.1| predicted S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli BL21(DE3)] gi|260448345|gb|ACX38767.1| methyltransferase small [Escherichia coli DH1] gi|309702961|emb|CBJ02292.1| putative DNA-binding protein [Escherichia coli ETEC H10407] gi|310331774|gb|EFP99009.1| methyltransferase small domain protein [Escherichia coli 1827-70] gi|315137199|dbj|BAJ44358.1| putative S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli DH1] gi|315615837|gb|EFU96469.1| methyltransferase small domain protein [Escherichia coli 3431] gi|323936315|gb|EGB32606.1| yfiC protein [Escherichia coli E1520] gi|323941162|gb|EGB37347.1| gyfiC [Escherichia coli E482] gi|323961190|gb|EGB56803.1| gyfiC [Escherichia coli H489] gi|323971099|gb|EGB66346.1| gyfiC [Escherichia coli TA007] gi|331059942|gb|EGI31919.1| hypothetical protein ECMG_01291 [Escherichia coli TA143] Length = 245 Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust. Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 5/89 (5%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 V R LD+G G+G + L L + + + V++ +A A+ N + +ER + +D Sbjct: 45 VKRCLDIGAGSGLLALMLAQRTDDSVMIDAVELESEAAAQAQENINQSPWAERINVHTAD 104 Query: 157 ---WFSSVEGLFDVIVSNPPYIESVIVDC 182 W + FD+I+SNPPY + V+C Sbjct: 105 IQQWITQQTVRFDLIISNPPYYQQG-VEC 132 >gi|325672686|ref|ZP_08152382.1| transferase [Rhodococcus equi ATCC 33707] gi|325556563|gb|EGD26229.1| transferase [Rhodococcus equi ATCC 33707] Length = 492 Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust. Identities = 29/85 (34%), Positives = 47/85 (55%), Gaps = 7/85 (8%) Query: 95 KRDVVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTL 153 R V +LD+GTG G + L+ + + V D++ +A ++ + A NG+ F+ L Sbjct: 152 SRPVGTVLDVGTGCG---IQALRAADYAGTVTATDVNPRATDLTAATAALNGLD--FEIL 206 Query: 154 QSDWFSSVEG-LFDVIVSNPPYIES 177 + WF V G FD IV+NPP++ S Sbjct: 207 EGSWFEPVAGRTFDQIVANPPFVVS 231 >gi|148260435|ref|YP_001234562.1| O-methyltransferase-like protein [Acidiphilium cryptum JF-5] gi|146402116|gb|ABQ30643.1| O-methyltransferase-like protein [Acidiphilium cryptum JF-5] Length = 239 Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust. Identities = 24/82 (29%), Positives = 37/82 (45%) Query: 93 IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152 + R R+++ GTG GA L L P +GVG++ + +A+ N TNG Sbjct: 35 VPARPGERVIEAGTGAGAGLLCLSYRVPELRGVGIERDPELAALARDNLRTNGFEGTTII 94 Query: 153 LQSDWFSSVEGLFDVIVSNPPY 174 + G FD +NPP+ Sbjct: 95 AADITGPPLTGPFDHAFANPPW 116 >gi|15640681|ref|NP_230310.1| hypothetical protein VC0661 [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121587873|ref|ZP_01677630.1| conserved hypothetical protein [Vibrio cholerae 2740-80] gi|153818696|ref|ZP_01971363.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457] gi|153822285|ref|ZP_01974952.1| conserved hypothetical protein [Vibrio cholerae B33] gi|227080842|ref|YP_002809393.1| hypothetical protein VCM66_0619 [Vibrio cholerae M66-2] gi|229508709|ref|ZP_04398202.1| predicted O-methyltransferase [Vibrio cholerae B33] gi|229519542|ref|ZP_04408985.1| predicted O-methyltransferase [Vibrio cholerae RC9] gi|229608736|ref|YP_002879384.1| predicted O-methyltransferase [Vibrio cholerae MJ-1236] gi|254850992|ref|ZP_05240342.1| conserved hypothetical protein [Vibrio cholerae MO10] gi|255743879|ref|ZP_05417835.1| predicted O-methyltransferase [Vibrio cholera CIRS 101] gi|262156098|ref|ZP_06029217.1| predicted O-methyltransferase [Vibrio cholerae INDRE 91/1] gi|298500777|ref|ZP_07010580.1| conserved hypothetical protein [Vibrio cholerae MAK 757] gi|81858152|sp|Q9KU62|TRMN6_VIBCH RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName: Full=tRNA m6A37 methyltransferase gi|262828776|sp|C3LSR6|TRMN6_VIBCM RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName: Full=tRNA m6A37 methyltransferase gi|9655099|gb|AAF93827.1| conserved hypothetical protein [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121547909|gb|EAX57993.1| conserved hypothetical protein [Vibrio cholerae 2740-80] gi|126510776|gb|EAZ73370.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457] gi|126520181|gb|EAZ77404.1| conserved hypothetical protein [Vibrio cholerae B33] gi|227008730|gb|ACP04942.1| conserved hypothetical protein [Vibrio cholerae M66-2] gi|229344231|gb|EEO09206.1| predicted O-methyltransferase [Vibrio cholerae RC9] gi|229354233|gb|EEO19163.1| predicted O-methyltransferase [Vibrio cholerae B33] gi|229371391|gb|ACQ61814.1| predicted O-methyltransferase [Vibrio cholerae MJ-1236] gi|254846697|gb|EET25111.1| conserved hypothetical protein [Vibrio cholerae MO10] gi|255738510|gb|EET93899.1| predicted O-methyltransferase [Vibrio cholera CIRS 101] gi|262030134|gb|EEY48779.1| predicted O-methyltransferase [Vibrio cholerae INDRE 91/1] gi|297540558|gb|EFH76616.1| conserved hypothetical protein [Vibrio cholerae MAK 757] Length = 240 Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust. Identities = 26/80 (32%), Positives = 36/80 (45%), Gaps = 5/80 (6%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD---W 157 ILD+G GTG + L + P +DI A A+ N + +ER + +D W Sbjct: 46 ILDIGCGTGLLSLMCAQRFPHAHITALDIEQTAYLAAEHNRQQSPWAERIECQHADILHW 105 Query: 158 FSSVEGLFDVIVSNPPYIES 177 S F I+ NPPY S Sbjct: 106 QPSKR--FAAIICNPPYFNS 123 >gi|240139856|ref|YP_002964333.1| putative methyltransferase small [Methylobacterium extorquens AM1] gi|254562275|ref|YP_003069370.1| methyltransferase small [Methylobacterium extorquens DM4] gi|240009830|gb|ACS41056.1| putative methyltransferase small [Methylobacterium extorquens AM1] gi|254269553|emb|CAX25519.1| putative methyltransferase small [Methylobacterium extorquens DM4] Length = 250 Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust. Identities = 25/85 (29%), Positives = 44/85 (51%), Gaps = 9/85 (10%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 + DLG TGAV LA+ + + + V V+ + +A+ NA NG+ R +++D + Sbjct: 44 LYDLGAATGAVGLAVARLTEVGRVVLVERDPDLVALARENAAANGLDGRVAVIEADLLAP 103 Query: 161 -----VEGL----FDVIVSNPPYIE 176 GL D++++NPP+ E Sbjct: 104 GVQRRAAGLEPDSADIVLTNPPFFE 128 >gi|182626807|ref|ZP_02954545.1| SAM-dependent methyltransferase [Clostridium perfringens D str. JGS1721] gi|177907853|gb|EDT70451.1| SAM-dependent methyltransferase [Clostridium perfringens D str. JGS1721] Length = 256 Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust. Identities = 27/97 (27%), Positives = 47/97 (48%), Gaps = 6/97 (6%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 VD+ L + + ++ V LDL TGTG + + + + VG++I + E+A +A Sbjct: 40 VDAVLLANFANVNRKHSV--LDLCTGTGIIPFIIYGKKNPKEVVGIEIQEEFAEMANRSA 97 Query: 142 VTNGVSER----FDTLQSDWFSSVEGLFDVIVSNPPY 174 N + ++ + L+ S FDV+ NPPY Sbjct: 98 KINNIEDKVSFVYGDLKDKELSKSMPKFDVVTVNPPY 134 >gi|18977199|ref|NP_578556.1| putative RNA methyltransferase [Pyrococcus furiosus DSM 3638] gi|50401623|sp|Q8U2K7|Y827_PYRFU RecName: Full=Uncharacterized RNA methyltransferase PF0827 gi|18892856|gb|AAL80951.1| putative RNA methyltransferase [Pyrococcus furiosus DSM 3638] Length = 409 Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust. Identities = 26/77 (33%), Positives = 46/77 (59%), Gaps = 4/77 (5%) Query: 97 DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 D ++LDL +G G L L K+ F VGV+I+ A+E+AK +A N ++ F +++ Sbjct: 269 DGSKVLDLYSGIGTFSLYLTKKG--FNVVGVEINKTAVEVAKLSAELNSLNVEFKAKRAE 326 Query: 157 WFSSVEGLFDVIVSNPP 173 ++EG +D ++ +PP Sbjct: 327 E-ENIEG-YDALILDPP 341 >gi|332089240|gb|EGI94347.1| hypothetical protein SD15574_3021 [Shigella dysenteriae 155-74] Length = 219 Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust. Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 4/84 (4%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 V R LD+G G+G + L L + + + V++ +A A+ N + +ER + +D Sbjct: 19 VKRCLDIGAGSGLLALMLAQRTDDSVMIDAVELESEAAAQAQENINQSPWAERINVHTAD 78 Query: 157 ---WFSSVEGLFDVIVSNPPYIES 177 W + FD+I+SNPPY + Sbjct: 79 IQQWLTQQTVRFDLIISNPPYYQQ 102 >gi|319649125|ref|ZP_08003333.1| YbxB protein [Bacillus sp. BT1B_CT2] gi|317388825|gb|EFV69644.1| YbxB protein [Bacillus sp. BT1B_CT2] Length = 184 Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust. Identities = 25/74 (33%), Positives = 43/74 (58%), Gaps = 3/74 (4%) Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 LD+G G G + L+L + +D++ +A+E++K NA+ N + + QSD F++V Sbjct: 46 LDVGCGYGPIGLSLAADFEDRMVHMIDVNERAVELSKENALNNQI-DNIKIYQSDLFANV 104 Query: 162 EGL--FDVIVSNPP 173 E F I++NPP Sbjct: 105 EPAKKFASIITNPP 118 >gi|313678696|ref|YP_004056436.1| methyltransferase small domain-containing protein [Mycoplasma bovis PG45] gi|312950166|gb|ADR24761.1| methyltransferase small domain protein [Mycoplasma bovis PG45] Length = 261 Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust. Identities = 21/84 (25%), Positives = 44/84 (52%), Gaps = 7/84 (8%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 + R+L++GT GA+ + + + + K ++I KA ++A SN + N ++ + +D+ Sbjct: 47 IKRMLEIGTNNGALSIFISERNKNLKIDAIEIQEKAAQLASSNVILNNKQDQITVITADF 106 Query: 158 -------FSSVEGLFDVIVSNPPY 174 V+ ++ IV NPP+ Sbjct: 107 NDFYKEHTKLVKPKYEAIVCNPPF 130 >gi|225719536|gb|ACO15614.1| Methyltransferase-like protein 5 [Caligus clemensi] Length = 210 Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust. Identities = 34/123 (27%), Positives = 56/123 (45%), Gaps = 13/123 (10%) Query: 58 RDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL-ALL 116 +DF + ++ L P + LL + ++ E + DLG+GTG + + A L Sbjct: 14 QDFQHPKILLEQYPTPPHIASRLLYTAQQSY-----EDIQGSIVADLGSGTGMLSIGASL 68 Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-----GLFDVIVSN 171 + G +D S A+ IA N G+ E D +Q D +E G+FD ++ N Sbjct: 69 LGASLVNGFEIDPS--AISIALDNVKEIGLQEPLDFIQMDALRLLESTPRRGIFDTVLMN 126 Query: 172 PPY 174 PP+ Sbjct: 127 PPF 129 >gi|313835743|gb|EFS73457.1| methyltransferase, HemK family [Propionibacterium acnes HL037PA2] gi|314928416|gb|EFS92247.1| methyltransferase, HemK family [Propionibacterium acnes HL044PA1] gi|314970113|gb|EFT14211.1| methyltransferase, HemK family [Propionibacterium acnes HL037PA3] gi|328906767|gb|EGG26539.1| methyltransferase small domain protein [Propionibacterium sp. P08] Length = 505 Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust. Identities = 43/153 (28%), Positives = 64/153 (41%), Gaps = 14/153 (9%) Query: 75 RPETELLVDSALAFSLPRIE-KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133 RP+ L V A + SL +I V R LD+G G G L L + + + V D++ +A Sbjct: 143 RPDYVLGVSPA-SVSLTQITIPTHVERALDMGCGCGVQSLHLSRHADYV--VATDVNPRA 199 Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDP 192 LE+A+ D + G FD+IV+NPPY+ + RD Sbjct: 200 LEMARLTCRL--CHADVDIRDGSLYDPCRGDTFDLIVTNPPYV-------MAPPSRDGQR 250 Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225 + +GG G + G LN G+ V Sbjct: 251 LVYREGGFAGDGLVEAVVRGAPARLNDGGVLQV 283 >gi|331684225|ref|ZP_08384821.1| hypothetical protein ECOG_00701 [Escherichia coli H299] gi|320196411|gb|EFW71035.1| putative methyltransferase [Escherichia coli WV_060327] gi|331079177|gb|EGI50379.1| hypothetical protein ECOG_00701 [Escherichia coli H299] Length = 245 Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust. Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 5/89 (5%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 V R LD+G G+G + L L + + + V++ +A A+ N + +ER + +D Sbjct: 45 VKRCLDIGAGSGLLALMLAQRTDDSVMIDAVELESEAAAQAQENINQSPWAERINVHTAD 104 Query: 157 ---WFSSVEGLFDVIVSNPPYIESVIVDC 182 W + FD+I+SNPPY + V+C Sbjct: 105 IQQWITQQTVRFDLIISNPPYYQQG-VEC 132 >gi|23335469|ref|ZP_00120705.1| COG2813: 16S RNA G1207 methylase RsmC [Bifidobacterium longum DJO10A] gi|189439026|ref|YP_001954107.1| 16S RNA G1207 methylase [Bifidobacterium longum DJO10A] gi|312132466|ref|YP_003999805.1| rsmc [Bifidobacterium longum subsp. longum BBMN68] gi|189427461|gb|ACD97609.1| 16S RNA G1207 methylase [Bifidobacterium longum DJO10A] gi|291516654|emb|CBK70270.1| 16S rRNA m(2)G 1207 methyltransferase [Bifidobacterium longum subsp. longum F8] gi|311773388|gb|ADQ02876.1| RsmC [Bifidobacterium longum subsp. longum BBMN68] Length = 218 Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust. Identities = 31/87 (35%), Positives = 41/87 (47%), Gaps = 16/87 (18%) Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 LDLG G G + L L ESP VD++ +AL++ +NA NG + T Q D S+ Sbjct: 63 LDLGCGWGPIALTLAFESPEANVWAVDVNERALDLTHANAQANGHT-NIHTAQVDESSTP 121 Query: 162 ---------------EGLFDVIVSNPP 173 + FDVI SNPP Sbjct: 122 LPAENQPAFCETVPSDLTFDVIWSNPP 148 >gi|262831234|sp|Q3YYU0|TRMN6_SHISS RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName: Full=tRNA m6A37 methyltransferase Length = 245 Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust. Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 5/89 (5%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 V R LD+G G+G + L L + + + V++ +A A+ N + +ER + +D Sbjct: 45 VKRCLDIGAGSGLLALMLAQRTSDSVIIDAVELESEAAAQAQENINQSPWAERINVHTAD 104 Query: 157 ---WFSSVEGLFDVIVSNPPYIESVIVDC 182 W + FD+I+SNPPY + V+C Sbjct: 105 IQQWLTQQTVRFDLIISNPPYYQQG-VEC 132 >gi|225351438|ref|ZP_03742461.1| hypothetical protein BIFPSEUDO_03033 [Bifidobacterium pseudocatenulatum DSM 20438] gi|225157782|gb|EEG71065.1| hypothetical protein BIFPSEUDO_03033 [Bifidobacterium pseudocatenulatum DSM 20438] Length = 247 Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust. Identities = 33/97 (34%), Positives = 49/97 (50%), Gaps = 4/97 (4%) Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 LDLG G G + L L SP +D++ +AL++ + NA NGV + +D S Sbjct: 109 LDLGCGWGPIALTLGFASPKADIWALDVNERALDLTRRNAELNGV-RNVHAVTADEIPS- 166 Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG 198 + FD+I SNPP V D L + + PR++ G Sbjct: 167 DMTFDLIWSNPPI--RVGKDVLHELLMTWLPRLNAGG 201 >gi|254424091|ref|ZP_05037809.1| Methyltransferase domain family [Synechococcus sp. PCC 7335] gi|196191580|gb|EDX86544.1| Methyltransferase domain family [Synechococcus sp. PCC 7335] Length = 426 Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust. Identities = 28/87 (32%), Positives = 45/87 (51%), Gaps = 3/87 (3%) Query: 84 SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143 +A +F R + + VRILD G GTG L+ +P + VG+D+S A+ +AK Sbjct: 65 AAYSFCTGRKPETNSVRILDAGCGTGVSTEYLVHLNPEAEVVGIDLSAGAIAVAKERCQR 124 Query: 144 NGV--SERFDTLQSDWFSSVEGLFDVI 168 +G + ++T D + G FD+I Sbjct: 125 SGADRASFYNTSIYD-VEQIPGKFDLI 150 >gi|218767557|ref|YP_002342069.1| ribosomal protein L11 methyltransferase [Neisseria meningitidis Z2491] gi|38605480|sp|Q9JW08|PRMA_NEIMA RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11 Mtase gi|121051565|emb|CAM07863.1| putative ribosomal protein L11 methyltransferase [Neisseria meningitidis Z2491] gi|319409821|emb|CBY90129.1| ribosomal protein L11 methyltransferase (L11 Mtase) [Neisseria meningitidis WUE 2594] Length = 295 Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust. Identities = 29/74 (39%), Positives = 39/74 (52%), Gaps = 11/74 (14%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDW 157 +LD G G+G + +A LK F VGVDI +A+ K NA N V +F D L Sbjct: 167 VLDYGCGSGILTIAALKLGAGF-AVGVDIDEQAVRAGKDNAEQNNVDAQFFLPDGLP--- 222 Query: 158 FSSVEGLFDVIVSN 171 +G FDV+V+N Sbjct: 223 ----QGQFDVVVAN 232 >gi|218701089|ref|YP_002408718.1| putative S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli IAI39] gi|262828101|sp|B7NRM8|TRMN6_ECO7I RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName: Full=tRNA m6A37 methyltransferase gi|218371075|emb|CAR18902.1| putative S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli IAI39] gi|323188310|gb|EFZ73602.1| methyltransferase small domain protein [Escherichia coli RN587/1] Length = 245 Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust. Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 5/89 (5%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 V R LD+G G+G + L L + + + V++ +A A+ N + +ER + +D Sbjct: 45 VKRCLDIGAGSGLLALMLAQRTDDSVMIDAVELESEAAAQAQENINQSPWAERINVHTAD 104 Query: 157 ---WFSSVEGLFDVIVSNPPYIESVIVDC 182 W + FD+I+SNPPY + V+C Sbjct: 105 IQQWITQQTVRFDLIISNPPYYQQG-VEC 132 >gi|163852522|ref|YP_001640565.1| methyltransferase small [Methylobacterium extorquens PA1] gi|163664127|gb|ABY31494.1| methyltransferase small [Methylobacterium extorquens PA1] Length = 250 Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust. Identities = 26/85 (30%), Positives = 44/85 (51%), Gaps = 9/85 (10%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 + DLG TGAV LA+ + S + V V+ + +A+ NA NG+ R +++D + Sbjct: 44 LYDLGAATGAVGLAVARLSEAGRVVLVERDTDLVALARENASANGLDGRVAVIEADLLAP 103 Query: 161 -----VEGL----FDVIVSNPPYIE 176 GL D++++NPP+ E Sbjct: 104 GAQRRAAGLEPDSADIVLTNPPFFE 128 >gi|168334727|ref|ZP_02692859.1| ribosomal protein L11 methyltransferase [Epulopiscium sp. 'N.t. morphotype B'] Length = 312 Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust. Identities = 29/89 (32%), Positives = 47/89 (52%), Gaps = 5/89 (5%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+LD+GTG+G + + K +GVDI ++++A N NGV++ +Q D Sbjct: 177 RVLDVGTGSGILGIVAAKLGASV--LGVDIDPMSVKVAIENVAINGVADDMAVVQGDLLE 234 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVR 188 V D+++SN I VI+ L +VR Sbjct: 235 VVAEKADIVISN--IIADVII-VLAAQVR 260 >gi|268611918|ref|ZP_06145645.1| type I restriction-modification system methylation subunit [Ruminococcus flavefaciens FD-1] Length = 534 Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust. Identities = 24/90 (26%), Positives = 43/90 (47%), Gaps = 9/90 (10%) Query: 94 EKRDVVRILDLGTGTGAVCLALLK---ESPFFKGVGVDISCKALEIAKSNAVTNGVS--- 147 E + + + D G+G++ L K + + + G ++S +A+ N +GV Sbjct: 217 EDKQGLLVYDAAMGSGSLLLNARKFSHKPDYIRYFGQELSTTTYNLARMNMFLHGVDPEN 276 Query: 148 ---ERFDTLQSDWFSSVEGLFDVIVSNPPY 174 DTL +DW + E FD+++ NPPY Sbjct: 277 QTLRNADTLDADWPTDEETDFDMVLMNPPY 306 >gi|117164966|emb|CAJ88518.1| putative methyltransferase [Streptomyces ambofaciens ATCC 23877] Length = 220 Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust. Identities = 34/119 (28%), Positives = 57/119 (47%), Gaps = 10/119 (8%) Query: 60 FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119 +V + + P+ +T LL + SLP +LD+GTG LA+ Sbjct: 1 MASVNFMVLPGVYAPQEDTALLTGALSDESLP-----PAASVLDVGTG--TGALAVAAAR 53 Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIES 177 + VD+S +A+ A+ NA +GV R + F+ V G FD++++NPPY+ + Sbjct: 54 RGARVTAVDVSWRAVCAARVNAARSGV--RIRVRHGNLFTPVRGETFDLVLANPPYVPA 110 >gi|313679199|ref|YP_004056938.1| 2-octaprenyl-6-methoxy-1,4-benzoquinone methylase; demethylmenaquinone methyltransferase [Oceanithermus profundus DSM 14977] gi|313151914|gb|ADR35765.1| 2-octaprenyl-6-methoxy-1,4-benzoquinone methylase; demethylmenaquinone methyltransferase [Oceanithermus profundus DSM 14977] Length = 234 Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust. Identities = 24/70 (34%), Positives = 36/70 (51%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 RILD+ TGTG V L L + P + VG D + + LE+A++ A G+ RF + Sbjct: 52 RILDVATGTGDVALLLKRARPEAEVVGGDFTPQMLELARAKAERAGLDVRFVEADALALP 111 Query: 160 SVEGLFDVIV 169 + FD + Sbjct: 112 FADASFDAVT 121 >gi|300922296|ref|ZP_07138421.1| methyltransferase small domain protein [Escherichia coli MS 182-1] gi|300421358|gb|EFK04669.1| methyltransferase small domain protein [Escherichia coli MS 182-1] Length = 378 Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust. Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 3/77 (3%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS--ERFDTLQSDWF 158 I+DLG G G + L LL ++P K V VD S A+ ++ N TN R + + ++ Sbjct: 232 IVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRMNVETNMPEALNRCEFMINNAL 291 Query: 159 SSVEGL-FDVIVSNPPY 174 S VE F+ ++ NPP+ Sbjct: 292 SGVEPFRFNAVLCNPPF 308 >gi|283788330|ref|YP_003368195.1| ribosomal RNA small subunit methyltransferase D [Citrobacter rodentium ICC168] gi|282951784|emb|CBG91493.1| putative ribosomal RNA small subunit methyltransferase D [Citrobacter rodentium ICC168] Length = 378 Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust. Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 4/91 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN--GVSERFDTLQSDWF 158 I+DLG G G + L LL ++P K V VD S A+ ++ N TN +R + + ++ Sbjct: 232 IVDLGCGNGVIGLTLLAKNPQAKVVFVDESPMAVASSRLNVETNLPDAVDRSEFMINNAL 291 Query: 159 SSVEGL-FDVIVSNPPYIES-VIVDCLGLEV 187 S VE F+ + NPP+ + + D + E+ Sbjct: 292 SGVEPFRFNAVFCNPPFHQKHALTDNIAWEM 322 >gi|28202126|gb|AAO27746.2| putative methyltransferase [Fusarium sporotrichioides] Length = 348 Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust. Identities = 29/90 (32%), Positives = 41/90 (45%), Gaps = 6/90 (6%) Query: 80 LLVDSAL-AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAK 138 LL+ AL A LP+ + + RILDLG GTG + + E P G+D+S + Sbjct: 94 LLLGGALHAAPLPKSDDQSDYRILDLGCGTGIWAIEMADEYPNASVAGIDLSPIQPDWVP 153 Query: 139 SNAVTNGVSERFDTLQSDWFSSVEGLFDVI 168 SN V + D + +W FD I Sbjct: 154 SNCVFH-----VDDYEDEWTYREHERFDYI 178 >gi|307243528|ref|ZP_07525676.1| THUMP domain protein [Peptostreptococcus stomatis DSM 17678] gi|306493084|gb|EFM65089.1| THUMP domain protein [Peptostreptococcus stomatis DSM 17678] Length = 382 Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust. Identities = 26/64 (40%), Positives = 38/64 (59%), Gaps = 3/64 (4%) Query: 115 LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE--RFDTLQSDWFSSVEGLFDVIVSNP 172 LLK+ F G DI +++EIAK+NA GV + RF+ + F+S E + I++NP Sbjct: 249 LLKDDESFTIYGYDIDPESIEIAKNNAEIAGVEKYIRFECRDATKFASNEE-YGFIITNP 307 Query: 173 PYIE 176 PY E Sbjct: 308 PYGE 311 >gi|37520580|ref|NP_923957.1| hypothetical protein glr1011 [Gloeobacter violaceus PCC 7421] gi|35211574|dbj|BAC88952.1| glr1011 [Gloeobacter violaceus PCC 7421] Length = 284 Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust. Identities = 27/85 (31%), Positives = 48/85 (56%), Gaps = 5/85 (5%) Query: 76 PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135 P +++V + L L R+ K D ++DLG G G + + +E +G+GVDI+ + +E Sbjct: 36 PTADVVVAAML--KLARVGKDDY--LIDLGCGDGRIVVTAAREH-GTRGLGVDIAPELVE 90 Query: 136 IAKSNAVTNGVSERFDTLQSDWFSS 160 ++++NA GV ER + D F + Sbjct: 91 LSRTNARRAGVDERVRFAEQDLFQT 115 >gi|299541918|ref|ZP_07052241.1| hypothetical protein BFZC1_23249 [Lysinibacillus fusiformis ZC1] gi|298725656|gb|EFI66297.1| hypothetical protein BFZC1_23249 [Lysinibacillus fusiformis ZC1] Length = 200 Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust. Identities = 31/98 (31%), Positives = 52/98 (53%), Gaps = 10/98 (10%) Query: 78 TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137 + +L+D AF +P I+ I D+G G G + L++ K +P +DI+ +A+ ++ Sbjct: 46 SRVLID---AFQMPDIDGA----IFDVGCGYGPIGLSIAKTNPDRTVFMMDINERAVALS 98 Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFD--VIVSNPP 173 + NA NGV + SD S V+ D I++NPP Sbjct: 99 QKNAQVNGV-QNVRIFVSDGLSMVDNDVDAAAILTNPP 135 >gi|261337500|ref|ZP_05965384.1| putative methyltransferase small domain protein [Bifidobacterium gallicum DSM 20093] gi|270277897|gb|EFA23751.1| putative methyltransferase small domain protein [Bifidobacterium gallicum DSM 20093] Length = 218 Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust. Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 4/97 (4%) Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 LDLG+G G + LA+ ++P + VD++ +++++ + NA NG + D V Sbjct: 78 LDLGSGWGPIALAMALDAPDARVYAVDVNERSIDLTRENAQANGCANIVAGTAQDVPDDV 137 Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG 198 F I SNPP + + L + + PR+ DG Sbjct: 138 R--FARIWSNPPI--RIGKEALHELLMTWLPRLEPDG 170 >gi|297565090|ref|YP_003684062.1| ubiquinone/menaquinone biosynthesis methyltransferase [Meiothermus silvanus DSM 9946] gi|296849539|gb|ADH62554.1| ubiquinone/menaquinone biosynthesis methyltransferase [Meiothermus silvanus DSM 9946] Length = 237 Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust. Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 1/77 (1%) Query: 93 IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152 IEK+ RILDL TGTG + L L + +P + +G D + LEIA+ A G+ F Sbjct: 51 IEKKPR-RILDLATGTGDMALLLKRLAPQAEVIGADFALPMLEIARQKARKLGLEIPFQQ 109 Query: 153 LQSDWFSSVEGLFDVIV 169 + + FD + Sbjct: 110 ADALALPFPDARFDAVT 126 >gi|294668436|ref|ZP_06733536.1| hypothetical protein NEIELOOT_00351 [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291309589|gb|EFE50832.1| hypothetical protein NEIELOOT_00351 [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 370 Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust. Identities = 35/120 (29%), Positives = 53/120 (44%), Gaps = 14/120 (11%) Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 D+GTG+G V ALL + + D + +AL A N G+ + +D F Sbjct: 196 FDIGTGSG-VLAALLAKRGLRQITATDNNPRALSCAGDNIRRLGLQRQIGIEAADLFP-- 252 Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221 EG D+IV NPP++ + +E +DP ++ + G H G HLN G Sbjct: 253 EGCADLIVCNPPWLPAKPTSA--VETALYDPDHAM---LRGFLH------GARSHLNSGG 301 >gi|237706154|ref|ZP_04536635.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA] gi|226899194|gb|EEH85453.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA] Length = 414 Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust. Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 4/91 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS--ERFDTLQSDWF 158 I+DLG G G + L LL ++P K V VD S A+ ++ N TN +R + + ++ Sbjct: 268 IVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNAL 327 Query: 159 SSVEGL-FDVIVSNPPYIES-VIVDCLGLEV 187 S VE F+ ++ NPP+ + + D + E+ Sbjct: 328 SGVEPFRFNAVLCNPPFHQQHALTDNVAWEM 358 >gi|297190845|ref|ZP_06908243.1| conserved hypothetical protein [Streptomyces pristinaespiralis ATCC 25486] gi|197722290|gb|EDY66198.1| conserved hypothetical protein [Streptomyces pristinaespiralis ATCC 25486] Length = 289 Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust. Identities = 21/70 (30%), Positives = 38/70 (54%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 V R+LD+G+G G + L + P+ + V VD + LE A++ A +G ++R T ++ Sbjct: 48 VRRVLDIGSGPGVITGLLAEAFPYAEVVAVDATAPLLERAQARAARHGQADRVRTHHAEL 107 Query: 158 FSSVEGLFDV 167 +E L + Sbjct: 108 PDGIEELGEA 117 >gi|113474212|ref|YP_720273.1| methyltransferase small [Trichodesmium erythraeum IMS101] gi|123352776|sp|Q119M4|TRMN6_TRIEI RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName: Full=tRNA m6A37 methyltransferase gi|110165260|gb|ABG49800.1| methyltransferase small [Trichodesmium erythraeum IMS101] Length = 239 Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust. Identities = 28/85 (32%), Positives = 46/85 (54%), Gaps = 7/85 (8%) Query: 100 RILDLGTGTGAVCLALLKESPFFK----GVGVDI--SCKALEIAKSNAVTNGVSERFDTL 153 +ILD+GTGTG + L L + S K V +DI S +A E + + ++ V ++ Sbjct: 40 KILDIGTGTGLIALMLAQRSSQLKVDIDAVEIDINSSIQARENVERSRWSDRVKVENYSI 99 Query: 154 QSDWFSSVEGLFDVIVSNPPYIESV 178 Q + + +D+IVSNPP+ E+ Sbjct: 100 QK-YIDICQKRYDLIVSNPPFFENA 123 >gi|322371733|ref|ZP_08046276.1| protein-L-isoaspartate O-methyltransferase [Haladaptatus paucihalophilus DX253] gi|320548618|gb|EFW90289.1| protein-L-isoaspartate O-methyltransferase [Haladaptatus paucihalophilus DX253] Length = 201 Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust. Identities = 28/72 (38%), Positives = 44/72 (61%), Gaps = 4/72 (5%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF-S 159 +LDLGTGTGA+ LAL + + +G DIS L+ A++ A NG+ E + + + Sbjct: 47 VLDLGTGTGAIALALAPGAE--RVIGRDISEGMLDEARTKAEENGI-ENVEFGEGRFRDP 103 Query: 160 SVEGLFDVIVSN 171 +V+G D++VSN Sbjct: 104 NVDGEVDIVVSN 115 >gi|312139425|ref|YP_004006761.1| methyltransferase [Rhodococcus equi 103S] gi|311888764|emb|CBH48076.1| putative methyltransferase [Rhodococcus equi 103S] Length = 492 Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust. Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 7/84 (8%) Query: 96 RDVVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQ 154 R V +LD+GTG G + L+ + + V D++ +A ++ + A NG+ F+ L+ Sbjct: 153 RPVGTVLDVGTGCG---IQALRAADYAGTVTATDVNPRATDLTAATAALNGLD--FEILE 207 Query: 155 SDWFSSVEG-LFDVIVSNPPYIES 177 WF V G FD IV+NPP++ S Sbjct: 208 GSWFEPVAGRTFDQIVANPPFVVS 231 >gi|307325108|ref|ZP_07604312.1| Methyltransferase type 12 [Streptomyces violaceusniger Tu 4113] gi|306889254|gb|EFN20236.1| Methyltransferase type 12 [Streptomyces violaceusniger Tu 4113] Length = 540 Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust. Identities = 21/40 (52%), Positives = 27/40 (67%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137 R+LDLG G G + ALLKE+ F + VGVD+S +AL A Sbjct: 323 AARVLDLGCGQGQLLGALLKEARFTEIVGVDVSMRALNEA 362 >gi|257898723|ref|ZP_05678376.1| conserved hypothetical protein [Enterococcus faecium Com15] gi|257836635|gb|EEV61709.1| conserved hypothetical protein [Enterococcus faecium Com15] Length = 186 Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust. Identities = 32/113 (28%), Positives = 53/113 (46%), Gaps = 10/113 (8%) Query: 75 RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134 RP T+ + +S P D +LDL G+G + + + + V VD + +AL Sbjct: 22 RPTTDKVKESIFNMIGPYF---DGETVLDLFAGSGGLAIEAVSRGCSY-AVCVDKNYQAL 77 Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPPYIESVIVD 181 +I K N E+F T++ D ++E L FD + +PPY + I+D Sbjct: 78 KIIKENIEITKEPEKFTTIKLDADKAIERLAAEKQQFDYLFLDPPYAKQKIID 130 >gi|161506215|ref|YP_001573327.1| hypothetical protein SARI_04407 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|229564340|sp|A9MPU2|RLMG_SALAR RecName: Full=Ribosomal RNA large subunit methyltransferase G; AltName: Full=23S rRNA m2G1835 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rlmG gi|160867562|gb|ABX24185.1| hypothetical protein SARI_04407 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 378 Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust. Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 4/91 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS--ERFDTLQSDWF 158 I+DLG G G + L+LL ++P V VD S A++ ++ N TN ER + + ++ Sbjct: 232 IVDLGCGNGVIGLSLLAKNPQANVVFVDESPMAVDSSRLNVETNMPEAFERCEFMINNAL 291 Query: 159 SSVEGL-FDVIVSNPPYIES-VIVDCLGLEV 187 S VE F+ + NPP+ + + D + E+ Sbjct: 292 SGVEPYRFNAVFCNPPFHQKHALTDNIAWEM 322 >gi|110642737|ref|YP_670467.1| hypothetical protein ECP_2577 [Escherichia coli 536] gi|123048967|sp|Q0TER3|TRMN6_ECOL5 RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName: Full=tRNA m6A37 methyltransferase gi|110344329|gb|ABG70566.1| hypothetical protein YfiC [Escherichia coli 536] Length = 245 Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust. Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 5/89 (5%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 V R LD+G G+G + L L + + + V++ +A A+ N + +ER + +D Sbjct: 45 VKRCLDIGAGSGLLALMLAQRTDDSVMIDAVELESEAAAQAQENINQSPWAERINVHTAD 104 Query: 157 ---WFSSVEGLFDVIVSNPPYIESVIVDC 182 W + FD+I+SNPPY + V+C Sbjct: 105 ILQWITQQTVRFDLIISNPPYYQQG-VEC 132 >gi|313127040|ref|YP_004037310.1| methyltransferase [Halogeometricum borinquense DSM 11551] gi|312293405|gb|ADQ67865.1| methyltransferase [Halogeometricum borinquense DSM 11551] Length = 342 Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust. Identities = 34/108 (31%), Positives = 49/108 (45%), Gaps = 14/108 (12%) Query: 79 ELLVDSALAFSLPRI--EKRDVV-------RILDLGTGTGAVCLALLKESPFFKGVGVDI 129 E L+D A + PR+ E+ VV R+ D+ G G + + K + VG D+ Sbjct: 162 EFLLDIAEVYFSPRLATERHRVVQQVTEGERVFDMFAGVGPFVIPMAKRGA--EVVGCDL 219 Query: 130 SCKALEIAKSNAVTNGVSERFDTLQS---DWFSSVEGLFDVIVSNPPY 174 + A+E + NA NGV ER Q D EG + IV N P+ Sbjct: 220 NAAAVEYLRENARRNGVEERVTARQGDVRDVADDYEGWANRIVMNLPH 267 >gi|306814361|ref|ZP_07448523.1| putative S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli NC101] gi|222034280|emb|CAP77021.1| Uncharacterized protein yfiC [Escherichia coli LF82] gi|305851755|gb|EFM52207.1| putative S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli NC101] gi|312947147|gb|ADR27974.1| putative S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli O83:H1 str. NRG 857C] Length = 245 Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust. Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 5/89 (5%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 V R LD+G G+G + L L + + + V++ +A A+ N + +ER + +D Sbjct: 45 VKRCLDIGAGSGLLALMLAQRTDDSVMIDAVELESEAAAQAQENINQSPWAERINVHTAD 104 Query: 157 ---WFSSVEGLFDVIVSNPPYIESVIVDC 182 W + FD+I+SNPPY + V+C Sbjct: 105 ILQWITQQTVRFDLIISNPPYYQQG-VEC 132 >gi|254502874|ref|ZP_05115025.1| Methyltransferase small domain family [Labrenzia alexandrii DFL-11] gi|222438945|gb|EEE45624.1| Methyltransferase small domain family [Labrenzia alexandrii DFL-11] Length = 347 Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust. Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 1/83 (1%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGV-DISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 R DLG G G + +L+++P + + + +AL++A+ N + + SD Sbjct: 201 RGADLGAGFGYLSRQVLEKAPKVAALDLYEAEKRALDLAEQNLAPFKGKKAMTGIWSDVT 260 Query: 159 SSVEGLFDVIVSNPPYIESVIVD 181 +EG +D +VSNPP+ +S D Sbjct: 261 KGIEGPYDFLVSNPPFHQSGKAD 283 >gi|254446424|ref|ZP_05059900.1| Methyltransferase domain family [Verrucomicrobiae bacterium DG1235] gi|198260732|gb|EDY85040.1| Methyltransferase domain family [Verrucomicrobiae bacterium DG1235] Length = 232 Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust. Identities = 27/83 (32%), Positives = 44/83 (53%), Gaps = 2/83 (2%) Query: 69 SDTFEPRPETELLVDSALAFSLPRI--EKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126 +D+++ R +T + +L L + E + RIL +G GTGA LAL K P ++ + Sbjct: 15 ADSYDSRWKTLAPFNESLHLQLALVLSELPEHARILCVGAGTGAELLALAKRYPKWRFLA 74 Query: 127 VDISCKALEIAKSNAVTNGVSER 149 VD S LE+ + +G S+R Sbjct: 75 VDPSQSMLEVCQRKVEESGFSDR 97 >gi|87241257|gb|ABD33115.1| SAM (and some other nucleotide) binding motif; Methyltransferase small; Tetratricopeptide-like helical [Medicago truncatula] Length = 971 Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust. Identities = 54/216 (25%), Positives = 92/216 (42%), Gaps = 33/216 (15%) Query: 62 NVRLTLS-SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAV----CLALL 116 +RL S ++ +EP ++ LVD+ LA +E + +++G G+G V L L Sbjct: 726 QIRLVSSHNEVYEPCDDSFALVDALLADRTNLLEHHPAL-CMEIGCGSGYVITSLALILG 784 Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNP 172 +E + DI+ A+++ + +GV + +D S +E G+ DV+V NP Sbjct: 785 QEGSGVNYIATDINPHAVKVTRETIEAHGVDAEL--IITDIASGLENRLAGMIDVMVVNP 842 Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLS---HYRTIADG----------VSRHLNK 219 PY+ + EV S GG +G S +AD V+ N Sbjct: 843 PYVPTPEA-----EVGSEGITASWAGGENGRSVIDRILPVADALLSEKGWLYMVTLTANN 897 Query: 220 DGLCSVEI---GYNQKVDVVRIFESRKLFLVNAFKD 252 +E+ GY K+ V R E L ++ ++D Sbjct: 898 PSEICLEMRKKGYTSKIVVQRSTEEESLHIIKFWRD 933 >gi|195117672|ref|XP_002003371.1| GI22924 [Drosophila mojavensis] gi|193913946|gb|EDW12813.1| GI22924 [Drosophila mojavensis] Length = 220 Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust. Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 4/76 (5%) Query: 102 LDLGTGTGAVCLALLKE-SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 L++G+G+G + AL K + + DI+ KA E K A+ NG R D+L+ + + Sbjct: 47 LEIGSGSGVIITALAKRLANTTHCLATDINPKACEATKRTAIRNGA--RLDSLRCNLTDA 104 Query: 161 V-EGLFDVIVSNPPYI 175 + D+++ NPPY+ Sbjct: 105 LRRRCIDLLLFNPPYV 120 >gi|154684624|ref|YP_001419785.1| YbxB [Bacillus amyloliquefaciens FZB42] gi|154350475|gb|ABS72554.1| YbxB [Bacillus amyloliquefaciens FZB42] Length = 201 Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust. Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 7/89 (7%) Query: 87 AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146 AF P I+ LD G G G + L+L E +D++ +A+E++ NA NG+ Sbjct: 52 AFEEPEIDGD----FLDAGCGYGPIGLSLAGEFTDRTVHMIDVNERAVELSNENAEKNGI 107 Query: 147 SERFDTLQSDWFSSVEG--LFDVIVSNPP 173 + QSD FS+++ F I++NPP Sbjct: 108 -KNVRIYQSDLFSNIDSAQTFASIITNPP 135 >gi|52079174|ref|YP_077965.1| putative RNA methyltransferase YefA [Bacillus licheniformis ATCC 14580] gi|52784541|ref|YP_090370.1| YefA [Bacillus licheniformis ATCC 14580] gi|52002385|gb|AAU22327.1| putative RNA methyltransferase YefA [Bacillus licheniformis ATCC 14580] gi|52347043|gb|AAU39677.1| YefA [Bacillus licheniformis ATCC 14580] Length = 462 Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust. Identities = 43/159 (27%), Positives = 79/159 (49%), Gaps = 29/159 (18%) Query: 36 FFLTNAIVRSLKHESIHRILG------WRDFY------NVRLTLSSDTF-EPRPE-TELL 81 F +IV+++ + + I G W + Y ++ +S+ +F + PE T++L Sbjct: 240 FPHVKSIVQNINPKKTNVIFGDETTVIWGEEYIYDTIGGIKFAISARSFYQVNPEQTKVL 299 Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 D AL ++ E+ ++D G G + L L K++ K GV+I +A+E AK NA Sbjct: 300 YDKALEYAELNGEET----VIDAYCGIGTISLFLAKQAK--KVYGVEIVPEAIEDAKRNA 353 Query: 142 VTNGV-SERFDTLQSD-----WFSSVEGL-FDVIVSNPP 173 NG+ + F+ +++ W+ EG+ D +V +PP Sbjct: 354 ELNGIENAEFEVGEAEVVIPKWYE--EGIAADTLVVDPP 390 >gi|332092601|gb|EGI97673.1| hypothetical protein SB359474_2998 [Shigella boydii 3594-74] Length = 219 Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust. Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 5/89 (5%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 V R LD+G G+G + L L + + + V++ +A A+ N + +ER + +D Sbjct: 19 VKRCLDIGAGSGLLALMLAQRTSDSVIIDAVELESEAAAQAQENINQSPWAERINVHTAD 78 Query: 157 ---WFSSVEGLFDVIVSNPPYIESVIVDC 182 W + FD+I+SNPPY + V+C Sbjct: 79 IQQWLTQQTVRFDLIISNPPYYQQG-VEC 106 >gi|297627202|ref|YP_003688965.1| transferase [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296922967|emb|CBL57549.1| transferase [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length = 505 Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust. Identities = 46/153 (30%), Positives = 66/153 (43%), Gaps = 14/153 (9%) Query: 75 RPETELLVDSALAFSLPRIEKRD-VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133 RP L V A + SL ++ D V LDLG G G L L + + DI+ +A Sbjct: 145 RPNYVLGVSPA-STSLAQLTVPDRVGSALDLGAGCGVQSLHLARHADTV--TLTDINPRA 201 Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDP 192 L++A+ NG+ D ++ V FD+IV+NPPY+ S D D Sbjct: 202 LDMARLTLALNGLD--LDVRAGSFYEPVAHDSFDLIVTNPPYVMSPPTDAA-------DR 252 Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225 + +GG G R + + HL GL V Sbjct: 253 LVYREGGFAGDGLVRHVVREGASHLADGGLLQV 285 >gi|170765846|ref|ZP_02900657.1| methyltransferase family protein [Escherichia albertii TW07627] gi|170124992|gb|EDS93923.1| methyltransferase family protein [Escherichia albertii TW07627] Length = 378 Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust. Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 4/91 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS--ERFDTLQSDWF 158 I+DLG G G + L LL ++P K V VD S A+ ++ N TN +R + + ++ Sbjct: 232 IVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNAL 291 Query: 159 SSVEGL-FDVIVSNPPYIES-VIVDCLGLEV 187 S VE F+ ++ NPP+ + + D + E+ Sbjct: 292 SGVEPFRFNAVLCNPPFHQQHALTDNVAWEM 322 >gi|215487919|ref|YP_002330350.1| predicted S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli O127:H6 str. E2348/69] gi|218559496|ref|YP_002392409.1| S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli S88] gi|227887611|ref|ZP_04005416.1| methyltransferase [Escherichia coli 83972] gi|312965491|ref|ZP_07779723.1| methyltransferase small domain protein [Escherichia coli 2362-75] gi|331658720|ref|ZP_08359664.1| hypothetical protein ECKG_04543 [Escherichia coli TA206] gi|262828199|sp|B7UH15|TRMN6_ECO27 RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName: Full=tRNA m6A37 methyltransferase gi|262828208|sp|B7MIR0|TRMN6_ECO45 RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName: Full=tRNA m6A37 methyltransferase gi|262831334|sp|Q8FF14|TRMN6_ECOL6 RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName: Full=tRNA m6A37 methyltransferase gi|262831340|sp|Q1R8F7|TRMN6_ECOUT RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName: Full=tRNA m6A37 methyltransferase gi|262831362|sp|A1AEA5|TRMN6_ECOK1 RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName: Full=tRNA m6A37 methyltransferase gi|215265991|emb|CAS10400.1| predicted S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli O127:H6 str. E2348/69] gi|218366265|emb|CAR04012.1| putative S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli S88] gi|227835961|gb|EEJ46427.1| methyltransferase [Escherichia coli 83972] gi|281179624|dbj|BAI55954.1| conserved hypothetical protein [Escherichia coli SE15] gi|294494020|gb|ADE92776.1| putative methyltransferase [Escherichia coli IHE3034] gi|307554594|gb|ADN47369.1| putative methyltransferase [Escherichia coli ABU 83972] gi|307625876|gb|ADN70180.1| putative S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli UM146] gi|312289911|gb|EFR17799.1| methyltransferase small domain protein [Escherichia coli 2362-75] gi|323949229|gb|EGB45120.1| hypothetical protein ERKG_04430 [Escherichia coli H252] gi|330912343|gb|EGH40853.1| putative O-methyltransferase [Escherichia coli AA86] gi|331054385|gb|EGI26412.1| hypothetical protein ECKG_04543 [Escherichia coli TA206] Length = 245 Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust. Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 5/89 (5%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 V R LD+G G+G + L L + + + V++ +A A+ N + +ER + +D Sbjct: 45 VKRCLDIGAGSGLLALMLAQRTDDSVMIDAVELESEAAAQAQENINQSPWAERINVHTAD 104 Query: 157 ---WFSSVEGLFDVIVSNPPYIESVIVDC 182 W + FD+I+SNPPY + V+C Sbjct: 105 ILQWITQQTVRFDLIISNPPYYQQG-VEC 132 >gi|13471576|ref|NP_103142.1| hypothetical protein mll1589 [Mesorhizobium loti MAFF303099] gi|14022318|dbj|BAB48928.1| mll1589 [Mesorhizobium loti MAFF303099] Length = 340 Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust. Identities = 29/74 (39%), Positives = 40/74 (54%), Gaps = 5/74 (6%) Query: 87 AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK-GVGVDISCKALEIAKSNAVTNG 145 A L + KR +LDLGTGTG + SP ++ GVG+D+S + L +A++N G Sbjct: 142 AAMLKLVGKRPFQSMLDLGTGTGRLLEIF---SPLYRRGVGIDMSREMLTVARANLDKAG 198 Query: 146 VSERFDTLQSDWFS 159 VS Q D FS Sbjct: 199 VSN-AQVRQGDIFS 211 >gi|300935709|ref|ZP_07150678.1| methyltransferase small domain protein [Escherichia coli MS 21-1] gi|300459098|gb|EFK22591.1| methyltransferase small domain protein [Escherichia coli MS 21-1] Length = 257 Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust. Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 5/89 (5%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 V R LD+G G+G + L L + + + V++ +A A+ N + +ER + +D Sbjct: 57 VKRCLDIGAGSGLLALMLAQRTDDSVMIDAVELESEAAAQAQENINQSPWAERINVHTAD 116 Query: 157 ---WFSSVEGLFDVIVSNPPYIESVIVDC 182 W + FD+I+SNPPY + V+C Sbjct: 117 IQQWITQQTVRFDLIISNPPYYQQG-VEC 144 >gi|293406017|ref|ZP_06650009.1| O-methyltransferase [Escherichia coli FVEC1412] gi|298381817|ref|ZP_06991416.1| yfiC protein [Escherichia coli FVEC1302] gi|291428225|gb|EFF01252.1| O-methyltransferase [Escherichia coli FVEC1412] gi|298279259|gb|EFI20773.1| yfiC protein [Escherichia coli FVEC1302] Length = 257 Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust. Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 5/89 (5%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 V R LD+G G+G + L L + + + V++ +A A+ N + +ER + +D Sbjct: 57 VKRCLDIGAGSGLLALMLAQRTDDSVMIDAVELESEAAAQAQENINQSPWAERINVHTAD 116 Query: 157 ---WFSSVEGLFDVIVSNPPYIESVIVDC 182 W + FD+I+SNPPY + V+C Sbjct: 117 IQQWITQQTVRFDLIISNPPYYQQG-VEC 144 >gi|118475607|ref|YP_892128.1| methyltransferase [Campylobacter fetus subsp. fetus 82-40] gi|118414833|gb|ABK83253.1| methyltransferase [Campylobacter fetus subsp. fetus 82-40] Length = 261 Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust. Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 3/72 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS- 159 I+D+G GTG V + L + K G+D+S LE+ +++A T G+ T SDW S Sbjct: 45 IIDIGCGTGTVAIPLASKGA--KVCGIDLSPGMLEVLENDAKTLGIDSLITTFISDWDSY 102 Query: 160 SVEGLFDVIVSN 171 ++ FD+++++ Sbjct: 103 EIKDKFDIVLTS 114 >gi|323167786|gb|EFZ53481.1| hypothetical protein SS53G_1987 [Shigella sonnei 53G] Length = 219 Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust. Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 5/89 (5%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 V R LD+G G+G + L L + + + V++ +A A+ N + +ER + +D Sbjct: 19 VKRCLDIGAGSGLLALMLAQRTSDSVIIDAVELESEAAAQAQENINQSPWAERINVHTAD 78 Query: 157 ---WFSSVEGLFDVIVSNPPYIESVIVDC 182 W + FD+I+SNPPY + V+C Sbjct: 79 IQQWLTQQTVRFDLIISNPPYYQQG-VEC 106 >gi|319647052|ref|ZP_08001278.1| YefA protein [Bacillus sp. BT1B_CT2] gi|317390876|gb|EFV71677.1| YefA protein [Bacillus sp. BT1B_CT2] Length = 458 Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust. Identities = 43/159 (27%), Positives = 79/159 (49%), Gaps = 29/159 (18%) Query: 36 FFLTNAIVRSLKHESIHRILG------WRDFY------NVRLTLSSDTF-EPRPE-TELL 81 F +IV+++ + + I G W + Y ++ +S+ +F + PE T++L Sbjct: 240 FPHVKSIVQNINPKKTNVIFGDETTVIWGEEYIYDTIGGIKFAISARSFYQVNPEQTKVL 299 Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 D AL ++ E+ ++D G G + L L K++ K GV+I +A+E AK NA Sbjct: 300 YDKALEYAELNGEET----VIDAYCGIGTISLFLAKQAK--KVYGVEIVPEAIEDAKRNA 353 Query: 142 VTNGV-SERFDTLQSD-----WFSSVEGL-FDVIVSNPP 173 NG+ + F+ +++ W+ EG+ D +V +PP Sbjct: 354 ELNGIENAEFEVGEAEVVIPKWYE--EGIAADTLVVDPP 390 >gi|315644350|ref|ZP_07897490.1| methyltransferase small [Paenibacillus vortex V453] gi|315280227|gb|EFU43519.1| methyltransferase small [Paenibacillus vortex V453] Length = 255 Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust. Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 5/80 (6%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD--- 156 RILD+ TG G V + LL G++I + ++A+ + NG+ E+ + D Sbjct: 51 RILDMCTGNGVVPI-LLSTRTGAPIEGIEIQPRLADMARRSVTMNGLQEQITIHEGDLRE 109 Query: 157 -WFSSVEGLFDVIVSNPPYI 175 + G +D+I NPPY+ Sbjct: 110 LYKEKGYGAYDLITVNPPYM 129 >gi|260857211|ref|YP_003231102.1| putative methyltransferase small domain [Escherichia coli O26:H11 str. 11368] gi|257755860|dbj|BAI27362.1| predicted methyltransferase small domain [Escherichia coli O26:H11 str. 11368] gi|323154541|gb|EFZ40741.1| ribosomal RNA large subunit methyltransferase G [Escherichia coli EPECa14] Length = 378 Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust. Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 4/91 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS--ERFDTLQSDWF 158 I+DLG G G + L LL ++P K V VD S A+ ++ N TN +R + + ++ Sbjct: 232 IVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRSEFMINNAL 291 Query: 159 SSVEGL-FDVIVSNPPYIES-VIVDCLGLEV 187 S VE F+ ++ NPP+ + + D + E+ Sbjct: 292 SGVEPFRFNAVLCNPPFHQQHALTDNVAWEM 322 >gi|218551605|ref|YP_002385397.1| methyltransferase small domain [Escherichia fergusonii ATCC 35469] gi|218359147|emb|CAQ91810.1| putative methyltransferase small domain [Escherichia fergusonii ATCC 35469] Length = 378 Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust. Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 3/77 (3%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS--ERFDTLQSDWF 158 I+DLG G G + L LL ++P K V VD S A+ ++ N TN +R + + ++ Sbjct: 232 IVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNAL 291 Query: 159 SSVEGL-FDVIVSNPPY 174 S VE F+ ++ NPP+ Sbjct: 292 SGVEPFRFNAVLCNPPF 308 >gi|239917256|ref|YP_002956814.1| 16S rRNA m(2)G 1207 methyltransferase [Micrococcus luteus NCTC 2665] gi|281414266|ref|ZP_06246008.1| 16S rRNA m(2)G 1207 methyltransferase [Micrococcus luteus NCTC 2665] gi|239838463|gb|ACS30260.1| 16S rRNA m(2)G 1207 methyltransferase [Micrococcus luteus NCTC 2665] Length = 211 Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust. Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 2/74 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R LD+G G G + L L SP + V+++ ++L++ + NA G+ D Sbjct: 66 RFLDVGAGWGPIALTLALRSPEAEVTAVEVNDRSLQLTRDNAAALGLGNVVALRPEDVPE 125 Query: 160 SVEGLFDVIVSNPP 173 E FD+I SNPP Sbjct: 126 GAE--FDLIWSNPP 137 >gi|220927646|ref|YP_002504555.1| methyltransferase small [Clostridium cellulolyticum H10] gi|219997974|gb|ACL74575.1| methyltransferase small [Clostridium cellulolyticum H10] Length = 196 Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust. Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 2/76 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LDLG G G V + K + D+ A+++A NA+ N V + L+SD F Sbjct: 48 KVLDLGCGYGVVGILASKIVGPENVIMTDVDENAIKLAIENALINSV-DSIKILKSDGFK 106 Query: 160 SV-EGLFDVIVSNPPY 174 + E F +I+SNPPY Sbjct: 107 ELKESGFSIILSNPPY 122 >gi|42573814|ref|NP_975003.1| ribosomal RNA adenine dimethylase family protein [Arabidopsis thaliana] gi|10177517|dbj|BAB10912.1| dimethyladenosine transferase-like protein [Arabidopsis thaliana] gi|332010821|gb|AED98204.1| Ribosomal RNA adenine dimethylase family protein [Arabidopsis thaliana] Length = 380 Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust. Identities = 20/74 (27%), Positives = 41/74 (55%), Gaps = 2/74 (2%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +L++G GTG + + LL+ + V V++ + +EI + +G +++ +Q D + Sbjct: 93 VLEIGPGTGNLTMKLLEAAQNV--VAVELDKRMVEILRKRVSDHGFADKLTIIQKDVLKT 150 Query: 161 VEGLFDVIVSNPPY 174 FD++V+N PY Sbjct: 151 DFPHFDLVVANIPY 164 >gi|92114677|ref|YP_574605.1| rRNA (guanine-N(2)-)-methyltransferase [Chromohalobacter salexigens DSM 3043] gi|122419455|sp|Q1QUF2|RSMC_CHRSD RecName: Full=Ribosomal RNA small subunit methyltransferase C; AltName: Full=16S rRNA m2G1207 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rsmC gi|91797767|gb|ABE59906.1| 16S rRNA m(2)G 1207 methyltransferase [Chromohalobacter salexigens DSM 3043] Length = 333 Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust. Identities = 27/82 (32%), Positives = 40/82 (48%), Gaps = 4/82 (4%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+LD+G G G + L + VD+ A+ + NGV+ + QSD F Sbjct: 195 RVLDVGCGDGILGAWLGVRG--AQVAAVDLDAFAVAATRRTFQANGVAG--EAWQSDVFG 250 Query: 160 SVEGLFDVIVSNPPYIESVIVD 181 V G +D IVSNPP+ + +D Sbjct: 251 DVSGSYDAIVSNPPFHQQRAID 272 >gi|187732632|ref|YP_001881841.1| methyltransferase family protein [Shigella boydii CDC 3083-94] gi|229470407|sp|B2U1T3|RLMG_SHIB3 RecName: Full=Ribosomal RNA large subunit methyltransferase G; AltName: Full=23S rRNA m2G1835 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rlmG gi|187429624|gb|ACD08898.1| methyltransferase family protein [Shigella boydii CDC 3083-94] Length = 378 Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust. Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 4/91 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS--ERFDTLQSDWF 158 I+DLG G G + L LL ++P K V VD S A+ ++ N TN +R + + ++ Sbjct: 232 IVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRSEFMINNAL 291 Query: 159 SSVEGL-FDVIVSNPPYIES-VIVDCLGLEV 187 S VE F+ ++ NPP+ + + D + E+ Sbjct: 292 SGVEPFRFNAVLCNPPFHQQHALTDNVAWEM 322 >gi|331648887|ref|ZP_08349975.1| ribosomal RNA large subunit methyltransferase G (rRNA(guanine-N(2)-)-methyltransferase) (23S rRNA m2G1835methyltransferase) [Escherichia coli M605] gi|330909150|gb|EGH37664.1| 23S rRNA (guanine-N-2-) -methyltransferase rlmG [Escherichia coli AA86] gi|331042634|gb|EGI14776.1| ribosomal RNA large subunit methyltransferase G (rRNA(guanine-N(2)-)-methyltransferase) (23S rRNA m2G1835methyltransferase) [Escherichia coli M605] Length = 378 Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust. Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 3/77 (3%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS--ERFDTLQSDWF 158 I+DLG G G + L LL ++P K V VD S A+ ++ N TN +R + + ++ Sbjct: 232 IVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNAL 291 Query: 159 SSVEGL-FDVIVSNPPY 174 S VE F+ ++ NPP+ Sbjct: 292 SGVEPFRFNAVLCNPPF 308 >gi|293416522|ref|ZP_06659161.1| ribosomal RNA large subunit methyltransferase G [Escherichia coli B185] gi|291431878|gb|EFF04861.1| ribosomal RNA large subunit methyltransferase G [Escherichia coli B185] Length = 378 Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust. Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 3/77 (3%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS--ERFDTLQSDWF 158 I+DLG G G + L LL ++P K V VD S A+ ++ N TN +R + + ++ Sbjct: 232 IVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNAL 291 Query: 159 SSVEGL-FDVIVSNPPY 174 S VE F+ ++ NPP+ Sbjct: 292 SGVEPFRFNAVLCNPPF 308 >gi|24114379|ref|NP_708889.1| putative enzyme [Shigella flexneri 2a str. 301] gi|30064427|ref|NP_838598.1| putative enzyme [Shigella flexneri 2a str. 2457T] gi|81837977|sp|Q821A5|RLMG_SHIFL RecName: Full=Ribosomal RNA large subunit methyltransferase G; AltName: Full=23S rRNA m2G1835 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rlmG gi|24053548|gb|AAN44596.1| putative enzyme [Shigella flexneri 2a str. 301] gi|30042686|gb|AAP18409.1| putative enzyme [Shigella flexneri 2a str. 2457T] gi|313648421|gb|EFS12864.1| ribosomal RNA large subunit methyltransferase G [Shigella flexneri 2a str. 2457T] gi|332752763|gb|EGJ83148.1| ribosomal RNA large subunit methyltransferase G [Shigella flexneri K-671] gi|332754595|gb|EGJ84961.1| ribosomal RNA large subunit methyltransferase G [Shigella flexneri 2747-71] gi|332765077|gb|EGJ95304.1| 23S rRNA methyltransferase [Shigella flexneri 2930-71] gi|333014758|gb|EGK34103.1| ribosomal RNA large subunit methyltransferase G [Shigella flexneri K-304] Length = 378 Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust. Identities = 30/97 (30%), Positives = 51/97 (52%), Gaps = 4/97 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS--ERFDTLQSDWF 158 I+DLG G G + L LL ++P K V VD S A+ ++ N TN +R + + ++ Sbjct: 232 IVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRSEFMINNAL 291 Query: 159 SSVEGL-FDVIVSNPPYIES-VIVDCLGLEVRDFDPR 193 S VE F+ ++ NPP+ + + D + E+ + R Sbjct: 292 SGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHYARR 328 >gi|328554280|gb|AEB24772.1| ribosomal protein L11 methyltransferase [Bacillus amyloliquefaciens TA208] gi|328912677|gb|AEB64273.1| Ribosomal protein L11 methyltransferase [Bacillus amyloliquefaciens LL3] Length = 311 Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust. Identities = 37/141 (26%), Positives = 66/141 (46%), Gaps = 30/141 (21%) Query: 56 GWRDFYN-------VRLTLSSDTFEPRPETELLV--DSALAF-------------SLPRI 93 W+ +Y+ + + +T+ P EL++ D +AF +L RI Sbjct: 113 AWKKYYHPVKISEKFTIVPTWETYTPVHTDELIIEMDPGMAFGTGTHPTTVLCIQALERI 172 Query: 94 -EKRDVVRILDLGTGTG--AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150 +K D R++D+GTG+G ++ A+L+ D+ A+E A+ N N VS+ Sbjct: 173 VQKGD--RVIDVGTGSGILSIAAAMLEAESVH---AYDLDPVAVESARLNVKLNKVSDTA 227 Query: 151 DTLQSDWFSSVEGLFDVIVSN 171 + Q++ + G DVIV+N Sbjct: 228 EVKQNNLLDGITGEHDVIVAN 248 >gi|329901539|ref|ZP_08272847.1| modification methylase, HemK family [Oxalobacteraceae bacterium IMCC9480] gi|327549082|gb|EGF33683.1| modification methylase, HemK family [Oxalobacteraceae bacterium IMCC9480] Length = 319 Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust. Identities = 21/48 (43%), Positives = 29/48 (60%), Gaps = 2/48 (4%) Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYI 175 DI+ AL A NA G+ R D F++V+G FD+I+SNPPY+ Sbjct: 168 DINPTALRYAAINADVAGIPVRLAL--GDTFAAVDGQFDLIISNPPYL 213 >gi|296241975|ref|YP_003649462.1| methyltransferase [Thermosphaera aggregans DSM 11486] gi|296094559|gb|ADG90510.1| methyltransferase [Thermosphaera aggregans DSM 11486] Length = 287 Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust. Identities = 47/157 (29%), Positives = 65/157 (41%), Gaps = 19/157 (12%) Query: 83 DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142 D+ L S RI + +V LD TG G + + E K V +I L IA+ N Sbjct: 121 DATLKASRARIRQGSIV--LDTCTGLGYTAITSI-ERGASKIVSTEIDPTVLWIAERNPW 177 Query: 143 TNGV-SERFDTLQSDWFSSVEGL----FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197 + G+ ER + D + V+ L FD I+ +PP + D GLE R+ Sbjct: 178 SRGLRDERITIINDDVLNLVKYLEDSFFDRIIHDPPRFSASTGDLYGLEFYRELFRVLKP 237 Query: 198 GGIDGLSHYR---------TIADGVSRHLNKDGLCSV 225 GGI L HY +I G+ L K G V Sbjct: 238 GGI--LYHYTGLPGFKSNYSILKGIKNRLEKAGFSRV 272 >gi|294101532|ref|YP_003553390.1| (uracil-5)-methyltransferase [Aminobacterium colombiense DSM 12261] gi|293616512|gb|ADE56666.1| (uracil-5)-methyltransferase [Aminobacterium colombiense DSM 12261] Length = 365 Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust. Identities = 38/114 (33%), Positives = 55/114 (48%), Gaps = 14/114 (12%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 +D A AF P+ EK V+ DL G+GA + + VGV+ S +A+E A SNA Sbjct: 207 LDEAEAFLSPK-EKEGVI---DLYCGSGASLKRWIGKG--CHTVGVETSAEAIESAGSNA 260 Query: 142 -----VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY--IESVIVDCLGLEVR 188 + S+R L + W ++EG + NPP IES + L L+ R Sbjct: 261 PGALLLRGTCSQRIPQL-AQWIETIEGYERLAYLNPPRTGIESDVRQWLALKAR 313 >gi|213408367|ref|XP_002174954.1| UbiE-like methyltransferase [Schizosaccharomyces japonicus yFS275] gi|212003001|gb|EEB08661.1| UbiE-like methyltransferase [Schizosaccharomyces japonicus yFS275] Length = 272 Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust. Identities = 22/67 (32%), Positives = 39/67 (58%), Gaps = 2/67 (2%) Query: 75 RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134 R ++ V ++ AF LP + +D +RILD+G G G + + + P + +G+D+S + Sbjct: 16 RSHSKRTVRNSAAFVLPFL--KDGMRILDIGCGPGTITIDFARMLPQAQVIGIDMSKDVI 73 Query: 135 EIAKSNA 141 IA+ NA Sbjct: 74 NIAEENA 80 >gi|194432131|ref|ZP_03064420.1| putative methyltransferase [Shigella dysenteriae 1012] gi|194419660|gb|EDX35740.1| putative methyltransferase [Shigella dysenteriae 1012] Length = 285 Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust. Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 4/84 (4%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 V R LD+G G+G + L L + + + V++ +A A+ N + +ER + +D Sbjct: 85 VKRCLDIGAGSGLLALMLAQRTDDSVMIDAVELESEAAAQAQENINQSPWAERINVHTAD 144 Query: 157 ---WFSSVEGLFDVIVSNPPYIES 177 W + FD+I+SNPPY + Sbjct: 145 IQQWLTQQTVRFDLIISNPPYYQQ 168 >gi|150024451|ref|YP_001295277.1| hypothetical protein FP0346 [Flavobacterium psychrophilum JIP02/86] gi|262828321|sp|A6GWI6|TRMN6_FLAPJ RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName: Full=tRNA m6A37 methyltransferase gi|149770992|emb|CAL42459.1| Protein of unknown function YfiC [Flavobacterium psychrophilum JIP02/86] Length = 234 Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust. Identities = 39/153 (25%), Positives = 71/153 (46%), Gaps = 14/153 (9%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS--- 155 + ILD+G GTG + L L + + + ++I +A E A N + S+R + Sbjct: 36 ISILDIGAGTGLIALMLAQRTSAVQIDALEIDEEAYEQATDNFENSPWSDRLFCYHAGLD 95 Query: 156 DWFSSVEGLFDVIVSNPP-YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214 ++ E +D+IV NPP Y E+ + E RD R S D + + + + Sbjct: 96 EFVEEPEDEYDLIVCNPPFYAENYKTNS---EQRDL-ARFS-----DAMP-FEELIEAAD 145 Query: 215 RHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLV 247 L+++G+ SV I Y ++ V + +L+ + Sbjct: 146 LLLSENGILSVIIPYKEEEKFVTLANEFELYPI 178 >gi|78213710|ref|YP_382489.1| hypothetical protein Syncc9605_2195 [Synechococcus sp. CC9605] gi|78198169|gb|ABB35934.1| conserved hypothetical protein [Synechococcus sp. CC9605] Length = 400 Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust. Identities = 29/78 (37%), Positives = 40/78 (51%), Gaps = 4/78 (5%) Query: 97 DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 + RILD G GTG L +P +GVDIS AL +A+ +G +E+ +L+ + Sbjct: 69 EAPRILDAGCGTGVSTDYLCHLNPGADVLGVDISDGALAVARERCRRSGAAEQVTSLRQE 128 Query: 157 WFS----SVEGLFDVIVS 170 S S EG FD I S Sbjct: 129 QRSLLDLSDEGSFDYINS 146 >gi|26249673|ref|NP_755713.1| putative ribosomal RNA small subunit methyltransferase D [Escherichia coli CFT073] gi|91212513|ref|YP_542499.1| putative ribosomal RNA small subunit methyltransferase D [Escherichia coli UTI89] gi|117625393|ref|YP_858716.1| putative ribosomal RNA small subunit methyltransferase D [Escherichia coli APEC O1] gi|191172240|ref|ZP_03033783.1| methyltransferase family protein [Escherichia coli F11] gi|218560168|ref|YP_002393081.1| methyltransferase small domain [Escherichia coli S88] gi|227887809|ref|ZP_04005614.1| ribosomal RNA small subunit methyltransferase D [Escherichia coli 83972] gi|293412462|ref|ZP_06655185.1| ribosomal RNA large subunit methyltransferase G [Escherichia coli B354] gi|300973026|ref|ZP_07172050.1| methyltransferase small domain protein [Escherichia coli MS 45-1] gi|300977562|ref|ZP_07173962.1| methyltransferase small domain protein [Escherichia coli MS 200-1] gi|301048074|ref|ZP_07195114.1| methyltransferase small domain protein [Escherichia coli MS 185-1] gi|331684737|ref|ZP_08385329.1| ribosomal RNA large subunit methyltransferase G (rRNA(guanine-N(2)-)-methyltransferase) (23S rRNA m2G1835methyltransferase) [Escherichia coli H299] gi|81474337|sp|Q8FDE5|RLMG_ECOL6 RecName: Full=Ribosomal RNA large subunit methyltransferase G; AltName: Full=23S rRNA m2G1835 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rlmG gi|122422364|sp|Q1R6P6|RLMG_ECOUT RecName: Full=Ribosomal RNA large subunit methyltransferase G; AltName: Full=23S rRNA m2G1835 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rlmG gi|229470495|sp|A1AG02|RLMG_ECOK1 RecName: Full=Ribosomal RNA large subunit methyltransferase G; AltName: Full=23S rRNA m2G1835 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rlmG gi|26110101|gb|AAN82287.1|AE016767_47 Putative ribosomal RNA small subunit methyltransferase D [Escherichia coli CFT073] gi|91074087|gb|ABE08968.1| putative ribosomal RNA small subunit methyltransferase D [Escherichia coli UTI89] gi|115514517|gb|ABJ02592.1| putative ribosomal RNA small subunit methyltransferase D [Escherichia coli APEC O1] gi|190907550|gb|EDV67146.1| methyltransferase family protein [Escherichia coli F11] gi|218366937|emb|CAR04708.1| putative methyltransferase small domain [Escherichia coli S88] gi|227835205|gb|EEJ45671.1| ribosomal RNA small subunit methyltransferase D [Escherichia coli 83972] gi|284923112|emb|CBG36205.1| putative ribosomal RNA small subunit methyltransferase D [Escherichia coli 042] gi|291469233|gb|EFF11724.1| ribosomal RNA large subunit methyltransferase G [Escherichia coli B354] gi|294490632|gb|ADE89388.1| methyltransferase family protein [Escherichia coli IHE3034] gi|300300088|gb|EFJ56473.1| methyltransferase small domain protein [Escherichia coli MS 185-1] gi|300308252|gb|EFJ62772.1| methyltransferase small domain protein [Escherichia coli MS 200-1] gi|300410918|gb|EFJ94456.1| methyltransferase small domain protein [Escherichia coli MS 45-1] gi|307555189|gb|ADN47964.1| methyltransferase family protein [Escherichia coli ABU 83972] gi|307625304|gb|ADN69608.1| putative methyltransferase small domain protein [Escherichia coli UM146] gi|315288871|gb|EFU48269.1| methyltransferase small domain protein [Escherichia coli MS 110-3] gi|315294960|gb|EFU54297.1| methyltransferase small domain protein [Escherichia coli MS 153-1] gi|323951385|gb|EGB47260.1| methyltransferase small domain-containing protein [Escherichia coli H252] gi|323957757|gb|EGB53471.1| methyltransferase small domain-containing protein [Escherichia coli H263] gi|324012058|gb|EGB81277.1| methyltransferase small domain protein [Escherichia coli MS 60-1] gi|331078352|gb|EGI49558.1| ribosomal RNA large subunit methyltransferase G (rRNA(guanine-N(2)-)-methyltransferase) (23S rRNA m2G1835methyltransferase) [Escherichia coli H299] Length = 378 Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust. Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 3/77 (3%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS--ERFDTLQSDWF 158 I+DLG G G + L LL ++P K V VD S A+ ++ N TN +R + + ++ Sbjct: 232 IVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNAL 291 Query: 159 SSVEGL-FDVIVSNPPY 174 S VE F+ ++ NPP+ Sbjct: 292 SGVEPFRFNAVLCNPPF 308 >gi|324008432|gb|EGB77651.1| methyltransferase small domain protein [Escherichia coli MS 57-2] Length = 219 Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust. Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 5/89 (5%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 V R LD+G G+G + L L + + + V++ +A A+ N + +ER + +D Sbjct: 19 VKRCLDIGAGSGLLALMLAQRTDDSVMIDAVELESEAAAQAQENINQSPWAERINVHTAD 78 Query: 157 ---WFSSVEGLFDVIVSNPPYIESVIVDC 182 W + FD+I+SNPPY + V+C Sbjct: 79 ILQWITQQTVRFDLIISNPPYYQQG-VEC 106 >gi|323491700|ref|ZP_08096878.1| ribosomal RNA small subunit methyltransferase C [Vibrio brasiliensis LMG 20546] gi|323314062|gb|EGA67148.1| ribosomal RNA small subunit methyltransferase C [Vibrio brasiliensis LMG 20546] Length = 376 Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust. Identities = 40/157 (25%), Positives = 75/157 (47%), Gaps = 14/157 (8%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER-FDTLQSD 156 + +LDLG G G + + + + +P K +D S A+E A+ N ++N SER + + ++ Sbjct: 231 IKHVLDLGCGNGVLSIKMGQLNPDIKLTCIDESFMAVESARQNLISNLGSERDIECIANN 290 Query: 157 WFSSVEGL-FDVIVSNPPY-IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214 + D+++ NPP+ + I D + ++ +I GG + + G + Sbjct: 291 CLDGMPATDVDMVMCNPPFHQQQAITDHIAWQMFCDAKQILSVGG-------QLLVIG-N 342 Query: 215 RHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK 251 RHL DG S G K +V + ++K ++ A K Sbjct: 343 RHLGYDGKLSRLFG---KSNVKVVAANKKFVILQATK 376 >gi|300898310|ref|ZP_07116658.1| conserved hypothetical protein [Escherichia coli MS 198-1] gi|300927701|ref|ZP_07143269.1| conserved hypothetical protein [Escherichia coli MS 187-1] gi|300951706|ref|ZP_07165526.1| conserved hypothetical protein [Escherichia coli MS 116-1] gi|300958784|ref|ZP_07170896.1| hypothetical protein HMPREF9547_04475 [Escherichia coli MS 175-1] gi|301024862|ref|ZP_07188499.1| conserved hypothetical protein [Escherichia coli MS 69-1] gi|301648339|ref|ZP_07248079.1| conserved hypothetical protein [Escherichia coli MS 146-1] gi|300314532|gb|EFJ64316.1| hypothetical protein HMPREF9547_04475 [Escherichia coli MS 175-1] gi|300357972|gb|EFJ73842.1| conserved hypothetical protein [Escherichia coli MS 198-1] gi|300396393|gb|EFJ79931.1| conserved hypothetical protein [Escherichia coli MS 69-1] gi|300449068|gb|EFK12688.1| conserved hypothetical protein [Escherichia coli MS 116-1] gi|300464254|gb|EFK27747.1| conserved hypothetical protein [Escherichia coli MS 187-1] gi|301073615|gb|EFK88421.1| conserved hypothetical protein [Escherichia coli MS 146-1] Length = 219 Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust. Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 5/89 (5%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 V R LD+G G+G + L L + + + V++ +A A+ N + +ER + +D Sbjct: 19 VKRCLDIGAGSGLLALMLAQRTDDSVMIDAVELESEAAAQAQENINQSPWAERINVHTAD 78 Query: 157 ---WFSSVEGLFDVIVSNPPYIESVIVDC 182 W + FD+I+SNPPY + V+C Sbjct: 79 IQQWITQQTVRFDLIISNPPYYQQG-VEC 106 >gi|239979327|ref|ZP_04701851.1| methyltransferase small [Streptomyces albus J1074] gi|291451202|ref|ZP_06590592.1| predicted protein [Streptomyces albus J1074] gi|291354151|gb|EFE81053.1| predicted protein [Streptomyces albus J1074] Length = 229 Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust. Identities = 42/158 (26%), Positives = 71/158 (44%), Gaps = 14/158 (8%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 L++G+GTG + +E +D+S +A+E + NA +G +R L+SD FS+ Sbjct: 64 FLEIGSGTGVTAVVAAQEG-CASVTALDLSEEAVENTRRNAARHGAGDRVRVLRSDLFSA 122 Query: 161 V--EGLFDVIVSNPPYIESV--IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216 + E FD+I N + E V+ L FDP G D +H R + + +R Sbjct: 123 LGPEERFDLIYWNSNFAEPPEGFVNETDLHHAFFDP------GYD--AHRRFLREAPAR- 173 Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYG 254 LN G + V+++R + + F+ G Sbjct: 174 LNPGGRVLLGFSSIGNVELLRALAAESGQKLTLFRSQG 211 >gi|218691387|ref|YP_002399599.1| putative methyltransferase small domain [Escherichia coli ED1a] gi|306816563|ref|ZP_07450695.1| putative methyltransferase small domain [Escherichia coli NC101] gi|331659376|ref|ZP_08360318.1| ribosomal RNA large subunit methyltransferase G (rRNA(guanine-N(2)-)-methyltransferase) (23S rRNA m2G1835methyltransferase) [Escherichia coli TA206] gi|331674628|ref|ZP_08375387.1| ribosomal RNA large subunit methyltransferase G (rRNA(guanine-N(2)-)-methyltransferase) (23S rRNA m2G1835methyltransferase) [Escherichia coli TA280] gi|218428951|emb|CAR09755.1| putative methyltransferase small domain [Escherichia coli ED1a] gi|281180137|dbj|BAI56467.1| conserved hypothetical protein [Escherichia coli SE15] gi|305850128|gb|EFM50587.1| putative methyltransferase small domain [Escherichia coli NC101] gi|315297785|gb|EFU57059.1| methyltransferase small domain protein [Escherichia coli MS 16-3] gi|323188470|gb|EFZ73755.1| ribosomal RNA large subunit methyltransferase G [Escherichia coli RN587/1] gi|324008839|gb|EGB78058.1| methyltransferase small domain protein [Escherichia coli MS 57-2] gi|331053958|gb|EGI25987.1| ribosomal RNA large subunit methyltransferase G (rRNA(guanine-N(2)-)-methyltransferase) (23S rRNA m2G1835methyltransferase) [Escherichia coli TA206] gi|331068067|gb|EGI39463.1| ribosomal RNA large subunit methyltransferase G (rRNA(guanine-N(2)-)-methyltransferase) (23S rRNA m2G1835methyltransferase) [Escherichia coli TA280] Length = 378 Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust. Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 3/77 (3%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS--ERFDTLQSDWF 158 I+DLG G G + L LL ++P K V VD S A+ ++ N TN +R + + ++ Sbjct: 232 IVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNAL 291 Query: 159 SSVEGL-FDVIVSNPPY 174 S VE F+ ++ NPP+ Sbjct: 292 SGVEPFRFNAVLCNPPF 308 >gi|110643328|ref|YP_671058.1| putative ribosomal RNA small subunit methyltransferase D [Escherichia coli 536] gi|170684079|ref|YP_001745354.1| methyltransferase family protein [Escherichia coli SMS-3-5] gi|123147664|sp|Q0TD22|RLMG_ECOL5 RecName: Full=Ribosomal RNA large subunit methyltransferase G; AltName: Full=23S rRNA m2G1835 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rlmG gi|229564327|sp|B1LFI2|RLMG_ECOSM RecName: Full=Ribosomal RNA large subunit methyltransferase G; AltName: Full=23S rRNA m2G1835 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rlmG gi|110344920|gb|ABG71157.1| putative ribosomal RNA small subunit methyltransferase D [Escherichia coli 536] gi|170521797|gb|ACB19975.1| methyltransferase family protein [Escherichia coli SMS-3-5] Length = 378 Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust. Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 3/77 (3%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS--ERFDTLQSDWF 158 I+DLG G G + L LL ++P K V VD S A+ ++ N TN +R + + ++ Sbjct: 232 IVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNAL 291 Query: 159 SSVEGL-FDVIVSNPPY 174 S VE F+ ++ NPP+ Sbjct: 292 SGVEPFRFNAVLCNPPF 308 >gi|74313522|ref|YP_311941.1| hypothetical protein SSON_3121 [Shigella sonnei Ss046] gi|82545340|ref|YP_409287.1| enzyme [Shigella boydii Sb227] gi|194431730|ref|ZP_03064021.1| methyltransferase family protein [Shigella dysenteriae 1012] gi|260869835|ref|YP_003236237.1| putative methyltransferase small domain [Escherichia coli O111:H- str. 11128] gi|123558746|sp|Q31WU9|RLMG_SHIBS RecName: Full=Ribosomal RNA large subunit methyltransferase G; AltName: Full=23S rRNA m2G1835 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rlmG gi|123616196|sp|Q3YXQ6|RLMG_SHISS RecName: Full=Ribosomal RNA large subunit methyltransferase G; AltName: Full=23S rRNA m2G1835 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rlmG gi|73856999|gb|AAZ89706.1| putative enzyme [Shigella sonnei Ss046] gi|81246751|gb|ABB67459.1| putative enzyme [Shigella boydii Sb227] gi|194420086|gb|EDX36164.1| methyltransferase family protein [Shigella dysenteriae 1012] gi|257766191|dbj|BAI37686.1| predicted methyltransferase small domain [Escherichia coli O111:H- str. 11128] gi|320177708|gb|EFW52697.1| putative enzyme [Shigella boydii ATCC 9905] gi|320184634|gb|EFW59431.1| putative enzyme [Shigella flexneri CDC 796-83] gi|323165037|gb|EFZ50827.1| ribosomal RNA large subunit methyltransferase G [Shigella sonnei 53G] gi|323173668|gb|EFZ59297.1| ribosomal RNA large subunit methyltransferase G [Escherichia coli LT-68] gi|323178790|gb|EFZ64366.1| ribosomal RNA large subunit methyltransferase G [Escherichia coli 1180] gi|332086559|gb|EGI91704.1| ribosomal RNA large subunit methyltransferase G [Shigella boydii 5216-82] gi|332086617|gb|EGI91759.1| ribosomal RNA large subunit methyltransferase G [Shigella dysenteriae 155-74] gi|332086761|gb|EGI91899.1| ribosomal RNA large subunit methyltransferase G [Shigella dysenteriae 155-74] gi|332092185|gb|EGI97263.1| ribosomal RNA large subunit methyltransferase G [Shigella boydii 3594-74] Length = 378 Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust. Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 4/91 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS--ERFDTLQSDWF 158 I+DLG G G + L LL ++P K V VD S A+ ++ N TN +R + + ++ Sbjct: 232 IVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRSEFMINNAL 291 Query: 159 SSVEGL-FDVIVSNPPYIES-VIVDCLGLEV 187 S VE F+ ++ NPP+ + + D + E+ Sbjct: 292 SGVEPFRFNAVLCNPPFHQQHALTDNVAWEM 322 >gi|15803625|ref|NP_289658.1| putative enzyme [Escherichia coli O157:H7 EDL933] gi|12517671|gb|AAG58217.1|AE005538_4 putative enzyme [Escherichia coli O157:H7 str. EDL933] Length = 378 Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust. Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 3/77 (3%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS--ERFDTLQSDWF 158 I+DLG G G + L LL ++P K V VD S A+ ++ N TN +R + + ++ Sbjct: 232 IVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNAL 291 Query: 159 SSVEGL-FDVIVSNPPY 174 S VE F+ ++ NPP+ Sbjct: 292 SGVEPFRFNAVLCNPPF 308 >gi|89109853|ref|AP_003633.1| predicted methyltransferase small domain [Escherichia coli str. K-12 substr. W3110] gi|90111535|ref|NP_417555.4| 23S rRNA mG1835 methyltransferase, SAM-dependent [Escherichia coli str. K-12 substr. MG1655] gi|170018665|ref|YP_001723619.1| rRNA (guanine-N(2)-)-methyltransferase [Escherichia coli ATCC 8739] gi|170082626|ref|YP_001731946.1| methyltransferase small subunit [Escherichia coli str. K-12 substr. DH10B] gi|188495269|ref|ZP_03002539.1| methyltransferase family protein [Escherichia coli 53638] gi|194439803|ref|ZP_03071869.1| methyltransferase family protein [Escherichia coli 101-1] gi|218701855|ref|YP_002409484.1| putative methyltransferase small domain [Escherichia coli IAI39] gi|238902194|ref|YP_002927990.1| putative methyltransferase small domain protein [Escherichia coli BW2952] gi|253772081|ref|YP_003034912.1| rRNA (guanine-N(2)-)-methyltransferase [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254163030|ref|YP_003046138.1| putative methyltransferase small domain protein [Escherichia coli B str. REL606] gi|256024337|ref|ZP_05438202.1| predicted methyltransferase small domain protein [Escherichia sp. 4_1_40B] gi|297518031|ref|ZP_06936417.1| predicted methyltransferase small domain protein [Escherichia coli OP50] gi|300931972|ref|ZP_07147269.1| methyltransferase small domain protein [Escherichia coli MS 187-1] gi|300950699|ref|ZP_07164590.1| methyltransferase small domain protein [Escherichia coli MS 116-1] gi|300958475|ref|ZP_07170613.1| methyltransferase small domain protein [Escherichia coli MS 175-1] gi|301025125|ref|ZP_07188718.1| methyltransferase small domain protein [Escherichia coli MS 196-1] gi|301644786|ref|ZP_07244761.1| methyltransferase small domain protein [Escherichia coli MS 146-1] gi|307139771|ref|ZP_07499127.1| predicted methyltransferase small domain protein [Escherichia coli H736] gi|9911104|sp|P42596|RLMG_ECOLI RecName: Full=Ribosomal RNA large subunit methyltransferase G; AltName: Full=23S rRNA m2G1835 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rlmG gi|229470493|sp|B1XG88|RLMG_ECODH RecName: Full=Ribosomal RNA large subunit methyltransferase G; AltName: Full=23S rRNA m2G1835 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rlmG gi|229470496|sp|B1IRN3|RLMG_ECOLC RecName: Full=Ribosomal RNA large subunit methyltransferase G; AltName: Full=23S rRNA m2G1835 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rlmG gi|85675884|dbj|BAE77134.1| predicted methyltransferase small domain [Escherichia coli str. K12 substr. W3110] gi|87082206|gb|AAC76119.2| 23S rRNA mG1835 methyltransferase, SAM-dependent [Escherichia coli str. K-12 substr. MG1655] gi|169753593|gb|ACA76292.1| rRNA (guanine-N(2)-)-methyltransferase [Escherichia coli ATCC 8739] gi|169890461|gb|ACB04168.1| predicted methyltransferase small domain [Escherichia coli str. K-12 substr. DH10B] gi|188490468|gb|EDU65571.1| methyltransferase family protein [Escherichia coli 53638] gi|194421251|gb|EDX37272.1| methyltransferase family protein [Escherichia coli 101-1] gi|218371841|emb|CAR19696.1| putative methyltransferase small domain [Escherichia coli IAI39] gi|238862672|gb|ACR64670.1| predicted methyltransferase small domain protein [Escherichia coli BW2952] gi|242378632|emb|CAQ33420.1| 23S rRNA m[2]G1835 methyltransferase [Escherichia coli BL21(DE3)] gi|253323125|gb|ACT27727.1| rRNA (guanine-N(2)-)-methyltransferase [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253974931|gb|ACT40602.1| predicted methyltransferase small domain protein [Escherichia coli B str. REL606] gi|253979087|gb|ACT44757.1| predicted methyltransferase small domain protein [Escherichia coli BL21(DE3)] gi|260447882|gb|ACX38304.1| rRNA (guanine-N(2)-)-methyltransferase [Escherichia coli DH1] gi|299880177|gb|EFI88388.1| methyltransferase small domain protein [Escherichia coli MS 196-1] gi|300314871|gb|EFJ64655.1| methyltransferase small domain protein [Escherichia coli MS 175-1] gi|300449995|gb|EFK13615.1| methyltransferase small domain protein [Escherichia coli MS 116-1] gi|300460395|gb|EFK23888.1| methyltransferase small domain protein [Escherichia coli MS 187-1] gi|301076940|gb|EFK91746.1| methyltransferase small domain protein [Escherichia coli MS 146-1] gi|309703514|emb|CBJ02854.1| putative ribosomal RNA small subunit methyltransferase D [Escherichia coli ETEC H10407] gi|315137676|dbj|BAJ44835.1| putative methyltransferase small domain protein [Escherichia coli DH1] gi|315617160|gb|EFU97769.1| ribosomal RNA large subunit methyltransferase G [Escherichia coli 3431] gi|323935916|gb|EGB32211.1| methyltransferase small domain-containing protein [Escherichia coli E1520] gi|323961047|gb|EGB56663.1| methyltransferase small domain-containing protein [Escherichia coli H489] gi|323970149|gb|EGB65422.1| methyltransferase small domain-containing protein [Escherichia coli TA007] gi|332345040|gb|AEE58374.1| ribosomal RNA large subunit methyltransferase G [Escherichia coli UMNK88] Length = 378 Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust. Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 3/77 (3%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS--ERFDTLQSDWF 158 I+DLG G G + L LL ++P K V VD S A+ ++ N TN +R + + ++ Sbjct: 232 IVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNAL 291 Query: 159 SSVEGL-FDVIVSNPPY 174 S VE F+ ++ NPP+ Sbjct: 292 SGVEPFRFNAVLCNPPF 308 >gi|325663767|ref|ZP_08152171.1| hypothetical protein HMPREF0490_02912 [Lachnospiraceae bacterium 4_1_37FAA] gi|331087287|ref|ZP_08336357.1| hypothetical protein HMPREF0987_02660 [Lachnospiraceae bacterium 9_1_43BFAA] gi|325470260|gb|EGC73493.1| hypothetical protein HMPREF0490_02912 [Lachnospiraceae bacterium 4_1_37FAA] gi|330408973|gb|EGG88434.1| hypothetical protein HMPREF0987_02660 [Lachnospiraceae bacterium 9_1_43BFAA] Length = 246 Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust. Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 8/80 (10%) Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD----- 156 LDLGTGTG + + L ++ G++I ++ ++A+ + N + ++ D Sbjct: 50 LDLGTGTGIIPILLEAKTEGEHFTGLEIQKESADMAQRSVAHNHLEQKITIQTGDIKEAG 109 Query: 157 -WFSSVEGLFDVIVSNPPYI 175 FS FDVI +NPPY+ Sbjct: 110 TIFSPAS--FDVITTNPPYM 127 >gi|320645454|gb|EFX14463.1| SAM-dependent 23S ribosomal RNA mG1835 methyltransferase [Escherichia coli O157:H- str. 493-89] gi|320650765|gb|EFX19222.1| SAM-dependent 23S ribosomal RNA mG1835 methyltransferase [Escherichia coli O157:H- str. H 2687] Length = 378 Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust. Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 3/77 (3%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS--ERFDTLQSDWF 158 I+DLG G G + L LL ++P K V VD S A+ ++ N TN +R + + ++ Sbjct: 232 IVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNAL 291 Query: 159 SSVEGL-FDVIVSNPPY 174 S VE F+ ++ NPP+ Sbjct: 292 SGVEPFRFNAVLCNPPF 308 >gi|301021894|ref|ZP_07185855.1| methyltransferase small domain protein [Escherichia coli MS 69-1] gi|300397810|gb|EFJ81348.1| methyltransferase small domain protein [Escherichia coli MS 69-1] Length = 378 Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust. Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 3/77 (3%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS--ERFDTLQSDWF 158 I+DLG G G + L LL ++P K V VD S A+ ++ N TN +R + + ++ Sbjct: 232 IVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNAL 291 Query: 159 SSVEGL-FDVIVSNPPY 174 S VE F+ ++ NPP+ Sbjct: 292 SGVEPFRFNAVLCNPPF 308 >gi|269962459|ref|ZP_06176808.1| ribosomal protein L11 methyltransferase [Vibrio harveyi 1DA3] gi|269832755|gb|EEZ86865.1| ribosomal protein L11 methyltransferase [Vibrio harveyi 1DA3] Length = 295 Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust. Identities = 33/112 (29%), Positives = 58/112 (51%), Gaps = 17/112 (15%) Query: 74 PRPET-ELLVDSALAFS----------LPRIEKRDVV--RILDLGTGTGAVCLALLKESP 120 P P+ +++D LAF L +E D+ ++D G G+G + +A +K Sbjct: 123 PEPDAVNVMLDPGLAFGTGTHPTTALCLEWLESLDLSGKTVIDFGCGSGILAIAAIKLG- 181 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF-DVIVSN 171 K +G+DI +AL+ ++ NA NGV+++ + + EGL DV+V+N Sbjct: 182 AGKVIGIDIDPQALQASRDNAERNGVADQLEVYLPQ--NQPEGLIADVVVAN 231 >gi|238064267|ref|ZP_04608976.1| methyltransferase type 12 [Micromonospora sp. ATCC 39149] gi|237886078|gb|EEP74906.1| methyltransferase type 12 [Micromonospora sp. ATCC 39149] Length = 328 Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust. Identities = 29/77 (37%), Positives = 37/77 (48%), Gaps = 4/77 (5%) Query: 90 LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 L I R RI+DLG G GA+ + LL E P GV +D+S A E A+ V +R Sbjct: 144 LSEIINRKPRRIVDLGAGAGALLIRLLTELPTSTGVALDLSSGACEEAERAGRRAQVGDR 203 Query: 150 FDTLQSDWFSSVEGLFD 166 + SVE L D Sbjct: 204 LTVVN----RSVETLVD 216 >gi|163843672|ref|YP_001628076.1| ribosomal protein L11 methyltransferase [Brucella suis ATCC 23445] gi|189037692|sp|B0CHK5|PRMA_BRUSI RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11 Mtase gi|163674395|gb|ABY38506.1| Ribosomal protein L11 methyltransferase [Brucella suis ATCC 23445] Length = 285 Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust. Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 5/83 (6%) Query: 93 IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152 ++ LDLGTG+ + +A+ + +P + DI A+ +A NA NGV+E T Sbjct: 142 VQTEHPTNALDLGTGSAVLAIAIARLAP-IPILATDIDPIAVTVAAENAAKNGVAEHIVT 200 Query: 153 LQSDWFSSV----EGLFDVIVSN 171 ++ F FD+IV+N Sbjct: 201 ATAEGFGHPIFRSYSPFDLIVAN 223 >gi|90406831|ref|ZP_01215023.1| 16S RNA G1207 methylase RsmC [Psychromonas sp. CNPT3] gi|90312068|gb|EAS40161.1| 16S RNA G1207 methylase RsmC [Psychromonas sp. CNPT3] Length = 348 Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust. Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 2/75 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ILD G G G + LL + +D++ AL AK + + N + + SD FS Sbjct: 210 NILDFGCGAGVIACYLLTKYSDLNVDLIDVNVYALASAKLSLLKNNLEG--EVFPSDVFS 267 Query: 160 SVEGLFDVIVSNPPY 174 V +D+++SNPP+ Sbjct: 268 DVNKKYDLLISNPPF 282 >gi|82778409|ref|YP_404758.1| putative enzyme [Shigella dysenteriae Sd197] gi|331654686|ref|ZP_08355686.1| ribosomal RNA large subunit methyltransferase G (rRNA(guanine-N(2)-)-methyltransferase) (23S rRNA m2G1835methyltransferase) [Escherichia coli M718] gi|81242557|gb|ABB63267.1| putative enzyme [Shigella dysenteriae Sd197] gi|331048068|gb|EGI20145.1| ribosomal RNA large subunit methyltransferase G (rRNA(guanine-N(2)-)-methyltransferase) (23S rRNA m2G1835methyltransferase) [Escherichia coli M718] Length = 388 Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust. Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 4/91 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS--ERFDTLQSDWF 158 I+DLG G G + L LL ++P K V VD S A+ ++ N TN +R + + ++ Sbjct: 242 IVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNAL 301 Query: 159 SSVEGL-FDVIVSNPPYIES-VIVDCLGLEV 187 S VE F+ ++ NPP+ + + D + E+ Sbjct: 302 SGVEPFRFNAVLCNPPFHQQHALTDNVAWEM 332 >gi|45655997|ref|YP_000083.1| RNA methyltransferase [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|51316692|sp|Q72W54|Y086_LEPIC RecName: Full=Uncharacterized RNA methyltransferase LIC_10086 gi|45599230|gb|AAS68720.1| RNA methyltransferase [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 415 Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust. Identities = 39/125 (31%), Positives = 61/125 (48%), Gaps = 12/125 (9%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDT--LQSD 156 RIL+L G+G + +AL +S +G +IS ++ AK N + NG+S F T L++D Sbjct: 271 RILELYCGSGLIAIAL--KSKTTSWLGYEISSDCVQQAKRNVLLNGISSCDFKTLNLETD 328 Query: 157 WFSSVEGLFDVI-VSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215 W S E L + NPP L +V + S +G + ++ T+ +S Sbjct: 329 WIDSEEVLNSSFWIMNPPRA------GLSKKVLQTLIKTSPNGFLYSSCNHSTLVRDLSL 382 Query: 216 HLNKD 220 LNKD Sbjct: 383 FLNKD 387 >gi|327295731|ref|XP_003232560.1| hypothetical protein TERG_06551 [Trichophyton rubrum CBS 118892] gi|326464871|gb|EGD90324.1| hypothetical protein TERG_06551 [Trichophyton rubrum CBS 118892] Length = 370 Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust. Identities = 47/177 (26%), Positives = 73/177 (41%), Gaps = 36/177 (20%) Query: 33 RQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVD--SALAFSL 90 RQR L + + + + ILG + F ++ + PRP+TE + + Sbjct: 56 RQRLQLL--VRQRAAGKPLQYILGDQPFGDLTILCREGVLIPRPDTESYTTRIAQRLLAE 113 Query: 91 PRIEKRDVVRILDLGTGTGAVCLALLKES----PFFKGVGVDISCKALEIAKSN------ 140 R+ VRI+D+ TGTG + L L P +GVDIS AL +AK N Sbjct: 114 NRLNPTRSVRIIDVCTGTGCIPLLLHSLLASLIPTISIIGVDISAAALSLAKKNLEYNIR 173 Query: 141 --AVTNGVSERFDTLQSDWFS-----------------SVEGL---FDVIVSNPPYI 175 A+ + + + +D S +GL D+++SNPPYI Sbjct: 174 NGALLSRARDEIHFVHADILDPCYLEPDGSELGKMLSRSNQGLSRGLDLLISNPPYI 230 >gi|319408182|emb|CBI81835.1| 3-demethylubiquinone-9 3-methyltransferase [Bartonella schoenbuchensis R1] Length = 248 Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust. Identities = 22/72 (30%), Positives = 41/72 (56%), Gaps = 2/72 (2%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 +RILD+G G G +C + + +G D S +E+AK++A+ +G+S + ++ Sbjct: 66 LRILDIGCGGGLLCEPMARLGATI--IGADASQTNIEVAKTHAIQSGLSIDYRATTAETL 123 Query: 159 SSVEGLFDVIVS 170 + E FDVI++ Sbjct: 124 ADEEEQFDVILN 135 >gi|255514009|gb|EET90273.1| methyltransferase small [Candidatus Micrarchaeum acidiphilum ARMAN-2] Length = 252 Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust. Identities = 34/126 (26%), Positives = 58/126 (46%), Gaps = 12/126 (9%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 V I + +G G + +LL + VDI+ +A+E+ + NG+ + D SD Sbjct: 45 VGTICEFCSGPGLIGFSLLANELCDRLCLVDINPEAIELCRYTIEQNGLEGKVDAFVSDG 104 Query: 158 FSSVEG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215 +V ++D+++SNPP+ + G E + I++D G +R V Sbjct: 105 LKNVPANQVWDLVISNPPHFD-------GSEKEYKNDLIAID---PGWRVHREFYADVGA 154 Query: 216 HLNKDG 221 HLNK G Sbjct: 155 HLNKGG 160 >gi|309785397|ref|ZP_07680028.1| ribosomal RNA large subunit methyltransferase G [Shigella dysenteriae 1617] gi|229470428|sp|Q32BN8|RLMG_SHIDS RecName: Full=Ribosomal RNA large subunit methyltransferase G; AltName: Full=23S rRNA m2G1835 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rlmG gi|308926517|gb|EFP71993.1| ribosomal RNA large subunit methyltransferase G [Shigella dysenteriae 1617] gi|325499864|gb|EGC97723.1| Ribosomal RNA large subunit methyltransferase G [Escherichia fergusonii ECD227] Length = 378 Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust. Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 3/77 (3%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS--ERFDTLQSDWF 158 I+DLG G G + L LL ++P K V VD S A+ ++ N TN +R + + ++ Sbjct: 232 IVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNAL 291 Query: 159 SSVEGL-FDVIVSNPPY 174 S VE F+ ++ NPP+ Sbjct: 292 SGVEPFRFNAVLCNPPF 308 >gi|218706708|ref|YP_002414227.1| putative methyltransferase small domain [Escherichia coli UMN026] gi|293406695|ref|ZP_06650621.1| ribosomal RNA large subunit methyltransferase G [Escherichia coli FVEC1412] gi|298382438|ref|ZP_06992035.1| ribosomal RNA large subunit methyltransferase G [Escherichia coli FVEC1302] gi|331664698|ref|ZP_08365603.1| ribosomal RNA large subunit methyltransferase G (rRNA(guanine-N(2)-)-methyltransferase) (23S rRNA m2G1835methyltransferase) [Escherichia coli TA143] gi|218433805|emb|CAR14722.1| putative methyltransferase small domain [Escherichia coli UMN026] gi|291426701|gb|EFE99733.1| ribosomal RNA large subunit methyltransferase G [Escherichia coli FVEC1412] gi|298277578|gb|EFI19094.1| ribosomal RNA large subunit methyltransferase G [Escherichia coli FVEC1302] gi|331057946|gb|EGI29928.1| ribosomal RNA large subunit methyltransferase G (rRNA(guanine-N(2)-)-methyltransferase) (23S rRNA m2G1835methyltransferase) [Escherichia coli TA143] Length = 378 Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust. Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 3/77 (3%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS--ERFDTLQSDWF 158 I+DLG G G + L LL ++P K V VD S A+ ++ N TN +R + + ++ Sbjct: 232 IVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNAL 291 Query: 159 SSVEGL-FDVIVSNPPY 174 S VE F+ ++ NPP+ Sbjct: 292 SGVEPFRFNAVLCNPPF 308 >gi|182416667|ref|ZP_02948072.1| SAM-dependent methyltransferase [Clostridium butyricum 5521] gi|237666253|ref|ZP_04526240.1| methyltransferase small [Clostridium butyricum E4 str. BoNT E BL5262] gi|182379482|gb|EDT76973.1| SAM-dependent methyltransferase [Clostridium butyricum 5521] gi|237658343|gb|EEP55896.1| methyltransferase small [Clostridium butyricum E4 str. BoNT E BL5262] Length = 250 Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust. Identities = 29/98 (29%), Positives = 47/98 (47%), Gaps = 8/98 (8%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 +D+ L ++ R R +DL TGTG V L + + VGV+I +E+A+ + Sbjct: 36 IDAVLLSDFANVKTRH--RAIDLCTGTGIVPFLLYGKYSPQEVVGVEIQSDMVEMAERSV 93 Query: 142 VTNGVSERFDTLQSDWFSSVEGL-----FDVIVSNPPY 174 N + + + D ++GL FDV+ NPPY Sbjct: 94 KLNSLESKVSFINLD-LKDIDGLKELGRFDVLTVNPPY 130 >gi|148273201|ref|YP_001222762.1| hypothetical protein CMM_2020 [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|147831131|emb|CAN02083.1| unnamed protein product [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 208 Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust. Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 4/95 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LD+G G G V L L SP VD++ +AL + ++NA + G+ L D + Sbjct: 63 LLDVGCGWGPVALDLAMRSPAATVWAVDVNERALALTRANARSLGLENVNAVLPEDVPAD 122 Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195 +E F + SNPP V + L + D+ PR+S Sbjct: 123 LE--FAAVWSNPPI--RVGKEALHGILLDWMPRLS 153 >gi|38704140|ref|NP_311993.2| hypothetical protein ECs3966 [Escherichia coli O157:H7 str. Sakai] gi|168749324|ref|ZP_02774346.1| methyltransferase family protein [Escherichia coli O157:H7 str. EC4113] gi|168754059|ref|ZP_02779066.1| methyltransferase family protein [Escherichia coli O157:H7 str. EC4401] gi|168762041|ref|ZP_02787048.1| methyltransferase family protein [Escherichia coli O157:H7 str. EC4501] gi|168769496|ref|ZP_02794503.1| methyltransferase family protein [Escherichia coli O157:H7 str. EC4486] gi|168773255|ref|ZP_02798262.1| methyltransferase family protein [Escherichia coli O157:H7 str. EC4196] gi|168781222|ref|ZP_02806229.1| methyltransferase family protein [Escherichia coli O157:H7 str. EC4076] gi|168785962|ref|ZP_02810969.1| methyltransferase family protein [Escherichia coli O157:H7 str. EC869] gi|168797679|ref|ZP_02822686.1| methyltransferase family protein [Escherichia coli O157:H7 str. EC508] gi|195937230|ref|ZP_03082612.1| hypothetical protein EscherichcoliO157_12376 [Escherichia coli O157:H7 str. EC4024] gi|208809571|ref|ZP_03251908.1| methyltransferase family protein [Escherichia coli O157:H7 str. EC4206] gi|208814358|ref|ZP_03255687.1| methyltransferase family protein [Escherichia coli O157:H7 str. EC4045] gi|208819645|ref|ZP_03259965.1| methyltransferase family protein [Escherichia coli O157:H7 str. EC4042] gi|209399561|ref|YP_002272557.1| methyltransferase family protein [Escherichia coli O157:H7 str. EC4115] gi|217326995|ref|ZP_03443078.1| methyltransferase family protein [Escherichia coli O157:H7 str. TW14588] gi|254795035|ref|YP_003079872.1| putative methyltransferase small domain-containing protein [Escherichia coli O157:H7 str. TW14359] gi|261228096|ref|ZP_05942377.1| predicted methyltransferase small domain protein [Escherichia coli O157:H7 str. FRIK2000] gi|261254952|ref|ZP_05947485.1| predicted methyltransferase small domain protein [Escherichia coli O157:H7 str. FRIK966] gi|229470492|sp|B5YRC4|RLMG_ECO5E RecName: Full=Ribosomal RNA large subunit methyltransferase G; AltName: Full=23S rRNA m2G1835 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rlmG gi|229470503|sp|Q8XAK8|RLMG_ECO57 RecName: Full=Ribosomal RNA large subunit methyltransferase G; AltName: Full=23S rRNA m2G1835 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rlmG gi|187770938|gb|EDU34782.1| methyltransferase family protein [Escherichia coli O157:H7 str. EC4196] gi|188016428|gb|EDU54550.1| methyltransferase family protein [Escherichia coli O157:H7 str. EC4113] gi|189000973|gb|EDU69959.1| methyltransferase family protein [Escherichia coli O157:H7 str. EC4076] gi|189358404|gb|EDU76823.1| methyltransferase family protein [Escherichia coli O157:H7 str. EC4401] gi|189361441|gb|EDU79860.1| methyltransferase family protein [Escherichia coli O157:H7 str. EC4486] gi|189367603|gb|EDU86019.1| methyltransferase family protein [Escherichia coli O157:H7 str. EC4501] gi|189374118|gb|EDU92534.1| methyltransferase family protein [Escherichia coli O157:H7 str. EC869] gi|189379623|gb|EDU98039.1| methyltransferase family protein [Escherichia coli O157:H7 str. EC508] gi|208729372|gb|EDZ78973.1| methyltransferase family protein [Escherichia coli O157:H7 str. EC4206] gi|208735635|gb|EDZ84322.1| methyltransferase family protein [Escherichia coli O157:H7 str. EC4045] gi|208739768|gb|EDZ87450.1| methyltransferase family protein [Escherichia coli O157:H7 str. EC4042] gi|209160961|gb|ACI38394.1| methyltransferase family protein [Escherichia coli O157:H7 str. EC4115] gi|217319362|gb|EEC27787.1| methyltransferase family protein [Escherichia coli O157:H7 str. TW14588] gi|254594435|gb|ACT73796.1| predicted methyltransferase small domain protein [Escherichia coli O157:H7 str. TW14359] gi|320189436|gb|EFW64095.1| putative enzyme [Escherichia coli O157:H7 str. EC1212] gi|320640157|gb|EFX09729.1| SAM-dependent 23S ribosomal RNA mG1835 methyltransferase [Escherichia coli O157:H7 str. G5101] gi|320666985|gb|EFX33961.1| SAM-dependent 23S ribosomal RNA mG1835 methyltransferase [Escherichia coli O157:H7 str. LSU-61] gi|326337788|gb|EGD61622.1| putative enzyme [Escherichia coli O157:H7 str. 1125] gi|326347353|gb|EGD71078.1| putative enzyme [Escherichia coli O157:H7 str. 1044] Length = 378 Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust. Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 3/77 (3%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS--ERFDTLQSDWF 158 I+DLG G G + L LL ++P K V VD S A+ ++ N TN +R + + ++ Sbjct: 232 IVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNAL 291 Query: 159 SSVEGL-FDVIVSNPPY 174 S VE F+ ++ NPP+ Sbjct: 292 SGVEPFRFNAVLCNPPF 308 >gi|81299140|ref|YP_399348.1| hypothetical protein Synpcc7942_0329 [Synechococcus elongatus PCC 7942] gi|81168021|gb|ABB56361.1| conserved hypothetical protein [Synechococcus elongatus PCC 7942] Length = 414 Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust. Identities = 40/144 (27%), Positives = 55/144 (38%), Gaps = 6/144 (4%) Query: 27 DSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL 86 DS L R RF A+ S+ + D Y D P SA Sbjct: 2 DSTLLGRSRFSFFAAMPDSVTQA----VSALYDAYPFPPEPMQDGPPPGYNWRWHYPSAY 57 Query: 87 AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146 AF R + RILD G GTG L +P + +DIS L +A+ +GV Sbjct: 58 AFCTGRAPQLGRPRILDAGCGTGVSTDYLAHLNPSAEITAIDISAGTLAVAQERCQRSGV 117 Query: 147 SERFDTLQSDWF--SSVEGLFDVI 168 ++R Q + + + G FD I Sbjct: 118 ADRIHFQQLSLYDVAQLPGEFDQI 141 >gi|254038254|ref|ZP_04872312.1| conserved hypothetical protein [Escherichia sp. 1_1_43] gi|331643782|ref|ZP_08344913.1| ribosomal RNA large subunit methyltransferase G (rRNA(guanine-N(2)-)-methyltransferase) (23S rRNA m2G1835methyltransferase) [Escherichia coli H736] gi|606022|gb|AAA57885.1| ORF_f388 [Escherichia coli str. K-12 substr. MG1655] gi|226839878|gb|EEH71899.1| conserved hypothetical protein [Escherichia sp. 1_1_43] gi|331037253|gb|EGI09477.1| ribosomal RNA large subunit methyltransferase G (rRNA(guanine-N(2)-)-methyltransferase) (23S rRNA m2G1835methyltransferase) [Escherichia coli H736] Length = 388 Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust. Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 4/91 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS--ERFDTLQSDWF 158 I+DLG G G + L LL ++P K V VD S A+ ++ N TN +R + + ++ Sbjct: 242 IVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNAL 301 Query: 159 SSVEGL-FDVIVSNPPYIES-VIVDCLGLEV 187 S VE F+ ++ NPP+ + + D + E+ Sbjct: 302 SGVEPFRFNAVLCNPPFHQQHALTDNVAWEM 332 >gi|13363439|dbj|BAB37389.1| putative enzyme [Escherichia coli O157:H7 str. Sakai] gi|209759090|gb|ACI77857.1| putative enzyme [Escherichia coli] gi|209759092|gb|ACI77858.1| putative enzyme [Escherichia coli] gi|209759096|gb|ACI77860.1| putative enzyme [Escherichia coli] Length = 388 Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust. Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 4/91 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS--ERFDTLQSDWF 158 I+DLG G G + L LL ++P K V VD S A+ ++ N TN +R + + ++ Sbjct: 242 IVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNAL 301 Query: 159 SSVEGL-FDVIVSNPPYIES-VIVDCLGLEV 187 S VE F+ ++ NPP+ + + D + E+ Sbjct: 302 SGVEPFRFNAVLCNPPFHQQHALTDNVAWEM 332 >gi|67464821|ref|XP_648602.1| dimethyladenosine transferase [Entamoeba histolytica HM-1:IMSS] gi|56464806|gb|EAL43214.1| dimethyladenosine transferase, putative [Entamoeba histolytica HM-1:IMSS] Length = 295 Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust. Identities = 26/76 (34%), Positives = 44/76 (57%), Gaps = 6/76 (7%) Query: 101 ILDLGTGTGAVCLALLKESPFFKG-VGVDISCK-ALEIAKSNAVTNGVSERFDTLQSDWF 158 +L++G GTG + + +L PF K + ++I + A E+ K +VT+ V ++ + +Q D+ Sbjct: 42 VLEIGPGTGNLTMKML---PFCKKLIAIEIDPRMAAELKKRVSVTDYV-KKLEIIQGDFL 97 Query: 159 SSVEGLFDVIVSNPPY 174 FDV VSN PY Sbjct: 98 KVELPYFDVCVSNTPY 113 >gi|295132390|ref|YP_003583066.1| hypothetical protein ZPR_0512 [Zunongwangia profunda SM-A87] gi|294980405|gb|ADF50870.1| protein containing methyltransferase small domain [Zunongwangia profunda SM-A87] Length = 240 Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust. Identities = 41/155 (26%), Positives = 69/155 (44%), Gaps = 14/155 (9%) Query: 96 RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155 D ILD+GTGTG + L + + S ++I A E A N + +R + Sbjct: 37 EDTDSILDVGTGTGVIALMMAQRSSAQLIDAIEIDENAYEQAVENFEHSDWGDRLFCYHA 96 Query: 156 DWFSSVEGL-----FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210 ++ VE + +D+I+SNPP+ S E RD R D L ++ + Sbjct: 97 EFGEFVEEMQDEEKYDLIISNPPFYNSDYK--TASEARDM-ARFQ-----DALP-FQLLL 147 Query: 211 DGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245 +G + L++ G +V I +Q+ D + + LF Sbjct: 148 EGATYLLSEKGRLAVIIPKSQEQDFLELAGDFNLF 182 >gi|119196521|ref|XP_001248864.1| hypothetical protein CIMG_02635 [Coccidioides immitis RS] Length = 391 Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust. Identities = 61/231 (26%), Positives = 86/231 (37%), Gaps = 62/231 (26%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRS-LKHESIHRILGWRDFYNV 63 RD S + L H + + DD R ++VR + + ILG + F + Sbjct: 27 RDLDSARNELRWLREHVHSLSKANACDDAWRQRQLKSMVRDRARGMPLQYILGDQPFGEL 86 Query: 64 RLTLSSDTFEPRPETE---------LLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLA 114 + PRPETE +L + + S P +RILDL TGTG + L Sbjct: 87 DILCRKGVLIPRPETESYTFRTARLILSELQMGSSSP-----APIRILDLCTGTGCIPLL 141 Query: 115 LLKES----PFFKGVGVDISCKALEIAKSNAVTN-------------------------- 144 L P VG+DIS KAL +A+ N N Sbjct: 142 LHSLLASSIPDLALVGIDISRKALSLARKNLEYNISQNHLLPRARQDISFLQANVLRDEK 201 Query: 145 --GVSERFDTLQS------DWFSSVE---------GLFDVIVSNPPYIESV 178 V D + S D+ S+ + G +DV++SNPPYI V Sbjct: 202 AELVKREGDAIPSLQAVLADFESAADIRNSRKDLRGQWDVLISNPPYISPV 252 >gi|16272371|ref|NP_438584.1| hypothetical protein HI0423 [Haemophilus influenzae Rd KW20] gi|260580514|ref|ZP_05848342.1| O-methyltransferase [Haemophilus influenzae RdAW] gi|1573395|gb|AAC22079.1| conserved hypothetical protein [Haemophilus influenzae Rd KW20] gi|260092856|gb|EEW76791.1| O-methyltransferase [Haemophilus influenzae RdAW] Length = 240 Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust. Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 4/84 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD--- 156 ILD+G GTG + L L + + + V++ A + A+ N + R Q D Sbjct: 47 ILDMGCGTGLLALMLAQRTEENCQIQAVELDPIAAKQAQENINNSVWKNRIQLTQVDIQH 106 Query: 157 WFSSVEGLFDVIVSNPPYIESVIV 180 + + E FD+IV+NPPY E I Sbjct: 107 FLQTTEQTFDLIVANPPYFEQGIA 130 >gi|291284462|ref|YP_003501280.1| hypothetical protein G2583_3808 [Escherichia coli O55:H7 str. CB9615] gi|290764335|gb|ADD58296.1| Putative enzyme [Escherichia coli O55:H7 str. CB9615] gi|320656144|gb|EFX24056.1| SAM-dependent 23S ribosomal RNA mG1835 methyltransferase [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320661834|gb|EFX29242.1| SAM-dependent 23S ribosomal RNA mG1835 methyltransferase [Escherichia coli O55:H7 str. USDA 5905] Length = 378 Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust. Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 3/77 (3%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS--ERFDTLQSDWF 158 I+DLG G G + L LL ++P K V VD S A+ ++ N TN +R + + ++ Sbjct: 232 IVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNAL 291 Query: 159 SSVEGL-FDVIVSNPPY 174 S VE F+ ++ NPP+ Sbjct: 292 SGVEPFRFNAVLCNPPF 308 >gi|260219477|emb|CBA26322.1| hypothetical protein Csp_E34100 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 423 Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust. Identities = 32/101 (31%), Positives = 47/101 (46%), Gaps = 8/101 (7%) Query: 82 VDSALAFSLPRIEKRDVVRIL-----DLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136 VD A LP +DV L D+GTG+G V A+L V D +A+ Sbjct: 219 VDLVAAAPLPAQSGKDVRDALPFVAFDIGTGSG-VLSAVLARRQDMHIVATDQDARAMAC 277 Query: 137 AKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIES 177 A N GV+ D Q+D F + G +++V NPP++ + Sbjct: 278 ATENFARLGVTAGIDLQQTDMFPA--GRANLVVCNPPWLPA 316 >gi|242398949|ref|YP_002994373.1| SAM-dependent methyltransferase, UbiE/COQ5 family [Thermococcus sibiricus MM 739] gi|242265342|gb|ACS90024.1| SAM-dependent methyltransferase, UbiE/COQ5 family [Thermococcus sibiricus MM 739] Length = 249 Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust. Identities = 25/62 (40%), Positives = 36/62 (58%), Gaps = 4/62 (6%) Query: 95 KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154 KR+V +ILDL GTG L L K ++ VG+D+ + LE+AK A G++ F +Q Sbjct: 39 KREVKKILDLACGTGIPTLELAKRG--YEVVGMDLHEEMLEVAKRKAKREGLTIEF--IQ 94 Query: 155 SD 156 D Sbjct: 95 GD 96 >gi|209759088|gb|ACI77856.1| putative enzyme [Escherichia coli] Length = 388 Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust. Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 4/91 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS--ERFDTLQSDWF 158 I+DLG G G + L LL ++P K V VD S A+ ++ N TN +R + + ++ Sbjct: 242 IVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNAL 301 Query: 159 SSVEGL-FDVIVSNPPYIES-VIVDCLGLEV 187 S VE F+ ++ NPP+ + + D + E+ Sbjct: 302 SGVEPFRFNAVLCNPPFHQQHALTDNVAWEM 332 >gi|154686805|ref|YP_001421966.1| ribosomal protein L11 methyltransferase [Bacillus amyloliquefaciens FZB42] gi|166223394|sp|A7Z6V9|PRMA_BACA2 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11 Mtase gi|154352656|gb|ABS74735.1| YqeT [Bacillus amyloliquefaciens FZB42] Length = 311 Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust. Identities = 37/141 (26%), Positives = 66/141 (46%), Gaps = 30/141 (21%) Query: 56 GWRDFYN-------VRLTLSSDTFEPRPETELLV--DSALAF-------------SLPRI 93 W+ +Y+ + + +T+ P EL++ D +AF +L RI Sbjct: 113 AWKKYYHPVKISEKFTIVPTWETYTPVHTDELIIEMDPGMAFGTGTHPTTVLCIQALERI 172 Query: 94 -EKRDVVRILDLGTGTG--AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150 +K D R++D+GTG+G ++ A+L+ D+ A+E A+ N N VS+ Sbjct: 173 VQKGD--RVIDVGTGSGILSIAAAMLEAESVH---AYDLDPVAVESARLNVKLNKVSDTA 227 Query: 151 DTLQSDWFSSVEGLFDVIVSN 171 + Q++ + G DVIV+N Sbjct: 228 EVKQNNLLDGITGEHDVIVAN 248 >gi|30698221|ref|NP_201437.2| ribosomal RNA adenine dimethylase family protein [Arabidopsis thaliana] gi|21539437|gb|AAM53271.1| dimethyladenosine transferase-like protein [Arabidopsis thaliana] gi|31711838|gb|AAP68275.1| At5g66360 [Arabidopsis thaliana] gi|332010820|gb|AED98203.1| Ribosomal RNA adenine dimethylase family protein [Arabidopsis thaliana] Length = 352 Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust. Identities = 20/74 (27%), Positives = 41/74 (55%), Gaps = 2/74 (2%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +L++G GTG + + LL+ + V V++ + +EI + +G +++ +Q D + Sbjct: 93 VLEIGPGTGNLTMKLLEAAQNV--VAVELDKRMVEILRKRVSDHGFADKLTIIQKDVLKT 150 Query: 161 VEGLFDVIVSNPPY 174 FD++V+N PY Sbjct: 151 DFPHFDLVVANIPY 164 >gi|193064025|ref|ZP_03045110.1| putative methyltransferase [Escherichia coli E22] gi|194429278|ref|ZP_03061805.1| putative methyltransferase [Escherichia coli B171] gi|209920054|ref|YP_002294138.1| hypothetical protein ECSE_2863 [Escherichia coli SE11] gi|218555157|ref|YP_002388070.1| putative S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli IAI1] gi|256017275|ref|ZP_05431140.1| putative S-adenosyl-L-methionine-dependent methyltransferase [Shigella sp. D9] gi|260845260|ref|YP_003223038.1| putative S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli O103:H2 str. 12009] gi|260856669|ref|YP_003230560.1| putative S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli O26:H11 str. 11368] gi|260869262|ref|YP_003235664.1| putative S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli O111:H- str. 11128] gi|307313854|ref|ZP_07593470.1| methyltransferase small [Escherichia coli W] gi|331669326|ref|ZP_08370174.1| hypothetical protein ECLG_01088 [Escherichia coli TA271] gi|262828119|sp|B7M8I9|TRMN6_ECO8A RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName: Full=tRNA m6A37 methyltransferase gi|262828233|sp|B6I5E9|TRMN6_ECOSE RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName: Full=tRNA m6A37 methyltransferase gi|262831209|sp|Q0T1T1|TRMN6_SHIF8 RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName: Full=tRNA m6A37 methyltransferase gi|262831223|sp|Q83QI2|TRMN6_SHIFL RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName: Full=tRNA m6A37 methyltransferase gi|192929260|gb|EDV82869.1| putative methyltransferase [Escherichia coli E22] gi|194412686|gb|EDX28981.1| putative methyltransferase [Escherichia coli B171] gi|209913313|dbj|BAG78387.1| conserved hypothetical protein [Escherichia coli SE11] gi|218361925|emb|CAQ99525.1| putative S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli IAI1] gi|257755318|dbj|BAI26820.1| predicted S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli O26:H11 str. 11368] gi|257760407|dbj|BAI31904.1| predicted S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli O103:H2 str. 12009] gi|257765618|dbj|BAI37113.1| predicted S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli O111:H- str. 11128] gi|306906355|gb|EFN36870.1| methyltransferase small [Escherichia coli W] gi|313648254|gb|EFS12698.1| methyltransferase small domain protein [Shigella flexneri 2a str. 2457T] gi|315061894|gb|ADT76221.1| predicted S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli W] gi|323156233|gb|EFZ42392.1| methyltransferase small domain protein [Escherichia coli EPECa14] gi|323159232|gb|EFZ45222.1| methyltransferase small domain protein [Escherichia coli E128010] gi|323177295|gb|EFZ62883.1| methyltransferase small domain protein [Escherichia coli 1180] gi|323184545|gb|EFZ69919.1| methyltransferase small domain protein [Escherichia coli 1357] gi|323377525|gb|ADX49793.1| methyltransferase small [Escherichia coli KO11] gi|331064520|gb|EGI36431.1| hypothetical protein ECLG_01088 [Escherichia coli TA271] gi|332753985|gb|EGJ84359.1| methyltransferase small domain protein [Shigella flexneri 4343-70] gi|332755824|gb|EGJ86182.1| methyltransferase small domain protein [Shigella flexneri 2747-71] gi|332761969|gb|EGJ92242.1| methyltransferase small domain protein [Shigella flexneri K-671] gi|332766577|gb|EGJ96782.1| S-adenosyl-L-methionine-dependent methyltransferase [Shigella flexneri 2930-71] gi|333000435|gb|EGK20017.1| methyltransferase small domain protein [Shigella flexneri VA-6] gi|333000850|gb|EGK20422.1| methyltransferase small domain protein [Shigella flexneri K-218] gi|333001668|gb|EGK21235.1| methyltransferase small domain protein [Shigella flexneri K-272] gi|333015944|gb|EGK35279.1| methyltransferase small domain protein [Shigella flexneri K-227] gi|333016822|gb|EGK36148.1| methyltransferase small domain protein [Shigella flexneri K-304] Length = 245 Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust. Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 5/89 (5%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 V R LD+G G+G + L L + + + V++ +A A+ N + +ER + +D Sbjct: 45 VKRCLDIGAGSGLLALMLAQRTSDSVIIDAVELESEAAAQAQENINQSPWAERINVHTAD 104 Query: 157 ---WFSSVEGLFDVIVSNPPYIESVIVDC 182 W + FD+I+SNPPY + V+C Sbjct: 105 IQQWITQQTVRFDLIISNPPYYQQG-VEC 132 >gi|325295579|ref|YP_004282093.1| hypothetical protein Dester_1403 [Desulfurobacterium thermolithotrophum DSM 11699] gi|325066027|gb|ADY74034.1| protein of unknown function Met10 [Desulfurobacterium thermolithotrophum DSM 11699] Length = 399 Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust. Identities = 30/85 (35%), Positives = 43/85 (50%), Gaps = 16/85 (18%) Query: 100 RILDL-----GTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154 R+LD G G A + KE V VD S AL++AK NA NGV+++F ++ Sbjct: 222 RVLDAFCHLGGFGIHAAVIGKAKEV-----VAVDSSQLALDLAKENAKLNGVADKFQFVK 276 Query: 155 SDWFSSVEGL------FDVIVSNPP 173 D F ++ + FD IV +PP Sbjct: 277 GDAFKVLKRMQQEGEKFDSIVIDPP 301 >gi|324112071|gb|EGC06049.1| methyltransferase small domain-containing protein [Escherichia fergusonii B253] Length = 378 Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust. Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 3/77 (3%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS--ERFDTLQSDWF 158 I+DLG G G + L LL ++P K V VD S A+ ++ N TN +R + + ++ Sbjct: 232 IVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNAL 291 Query: 159 SSVEGL-FDVIVSNPPY 174 S VE F+ ++ NPP+ Sbjct: 292 SGVEPFRFNAVLCNPPF 308 >gi|300974120|ref|ZP_07172470.1| methyltransferase small domain protein [Escherichia coli MS 200-1] gi|300982279|ref|ZP_07175990.1| methyltransferase small domain protein [Escherichia coli MS 45-1] gi|301047214|ref|ZP_07194306.1| methyltransferase small domain protein [Escherichia coli MS 185-1] gi|300300891|gb|EFJ57276.1| methyltransferase small domain protein [Escherichia coli MS 185-1] gi|300308943|gb|EFJ63463.1| methyltransferase small domain protein [Escherichia coli MS 200-1] gi|300408833|gb|EFJ92371.1| methyltransferase small domain protein [Escherichia coli MS 45-1] gi|315287991|gb|EFU47393.1| methyltransferase small domain protein [Escherichia coli MS 110-3] gi|315294532|gb|EFU53880.1| methyltransferase small domain protein [Escherichia coli MS 153-1] gi|315300544|gb|EFU59773.1| methyltransferase small domain protein [Escherichia coli MS 16-3] gi|324014380|gb|EGB83599.1| methyltransferase small domain protein [Escherichia coli MS 60-1] Length = 219 Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust. Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 5/89 (5%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 V R LD+G G+G + L L + + + V++ +A A+ N + +ER + +D Sbjct: 19 VKRCLDIGAGSGLLALMLAQRTDDSVMIDAVELESEAAAQAQENINQSPWAERINVHTAD 78 Query: 157 ---WFSSVEGLFDVIVSNPPYIESVIVDC 182 W + FD+I+SNPPY + V+C Sbjct: 79 ILQWITQQTVRFDLIISNPPYYQQG-VEC 106 >gi|290956813|ref|YP_003487995.1| methyltransferase [Streptomyces scabiei 87.22] gi|260646339|emb|CBG69434.1| putative methyltransferase [Streptomyces scabiei 87.22] Length = 496 Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust. Identities = 21/57 (36%), Positives = 33/57 (57%) Query: 93 IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 +++ R+LDLG G G + ALLK+ + + VG D+S +AL IA + + ER Sbjct: 298 LQESGAARVLDLGCGQGQLVQALLKDVRYTEIVGTDVSMRALTIAARRLKLDRMGER 354 >gi|242814941|ref|XP_002486472.1| arsenite methyltransferase, putative [Talaromyces stipitatus ATCC 10500] gi|218714811|gb|EED14234.1| arsenite methyltransferase, putative [Talaromyces stipitatus ATCC 10500] Length = 303 Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust. Identities = 24/54 (44%), Positives = 31/54 (57%), Gaps = 2/54 (3%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135 +S AF LP IEK D RILD+G G G++ K + VGVDIS + L+ Sbjct: 27 AESHAAFLLPHIEKGD--RILDVGCGPGSITTGFAKYASEGSIVGVDISAEVLQ 78 >gi|215488413|ref|YP_002330844.1| predicted methyltransferase small domain [Escherichia coli O127:H6 str. E2348/69] gi|215266485|emb|CAS10924.1| predicted methyltransferase small domain [Escherichia coli O127:H6 str. E2348/69] Length = 378 Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust. Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 3/77 (3%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS--ERFDTLQSDWF 158 I+DLG G G + L LL ++P K V VD S A+ ++ N TN +R + + ++ Sbjct: 232 IVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPESLDRCEFMINNAL 291 Query: 159 SSVEGL-FDVIVSNPPY 174 S VE F+ ++ NPP+ Sbjct: 292 SGVEPFRFNAVLCNPPF 308 >gi|126733998|ref|ZP_01749745.1| methyltransferase small [Roseobacter sp. CCS2] gi|126716864|gb|EBA13728.1| methyltransferase small [Roseobacter sp. CCS2] Length = 251 Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust. Identities = 34/110 (30%), Positives = 50/110 (45%), Gaps = 10/110 (9%) Query: 72 FEPRPETELLVDSA-LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130 ++PR VD LA S+P + V L+LG G G L L P GV++ Sbjct: 18 WQPRRGYRAGVDPVILAASVPAKSGQTV---LELGCGVGVASLCLAARVPGLHVTGVEVQ 74 Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPYIE 176 +A+ N V N + F+ + +D S GL FD ++ NPPY + Sbjct: 75 DVYSTLAQRNGVANDLP--FEVITADLRSLPAGLRQKRFDHVIMNPPYFD 122 >gi|20092700|ref|NP_618775.1| ubiE/COQ5 methyltransferase [Methanosarcina acetivorans C2A] gi|19917988|gb|AAM07255.1| ubiE/COQ5 methyltransferase [Methanosarcina acetivorans C2A] Length = 251 Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust. Identities = 35/115 (30%), Positives = 54/115 (46%), Gaps = 8/115 (6%) Query: 58 RDFYNVRLTLSSDTFEPRP--ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL 115 RDF+N R S TF+ P T + L R + D +ILD+G+GTG + L L Sbjct: 9 RDFWNYR----SQTFDKSPGHYTASKEEEEAWKGLLRSKLDDAEKILDIGSGTGFLSLML 64 Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170 ++ VG+D+S + + A + A G+S F ++ FD IV+ Sbjct: 65 ADMG--YEVVGIDLSEEMIARASAKAKERGLSIDFHQDDAEQLGFENNSFDAIVN 117 >gi|60681874|ref|YP_212018.1| hypothetical protein BF2394 [Bacteroides fragilis NCTC 9343] gi|81315061|sp|Q5LCS1|TRMN6_BACFN RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName: Full=tRNA m6A37 methyltransferase gi|60493308|emb|CAH08092.1| conserved hypothetical protein [Bacteroides fragilis NCTC 9343] Length = 237 Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust. Identities = 44/151 (29%), Positives = 67/151 (44%), Gaps = 14/151 (9%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW- 157 RILD+GTGTG V L +L + + ++I A + A N + R + + D+ Sbjct: 39 ARILDIGTGTGLVAL-MLAQRCSASVIALEIDGTAAQQAAENITRSPWGSRIEVVCQDFR 97 Query: 158 -FSSVEG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214 +S+ +D IVSNPPY D L D + + D LS Y + GVS Sbjct: 98 LYSNKNNSLKYDTIVSNPPY----FTDSLKCP----DSQRNTARHNDNLS-YEELLKGVS 148 Query: 215 RHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245 L+ +G +V I + I S+ L+ Sbjct: 149 NLLSPNGTFTVVIPMDASDSFKDIASSQGLY 179 >gi|325694149|gb|EGD36067.1| ribosomal RNA small subunit methyltransferase D [Streptococcus sanguinis SK150] Length = 182 Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust. Identities = 35/131 (26%), Positives = 59/131 (45%), Gaps = 16/131 (12%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+LDL G+G++ + + + V V+ +A I N ERFD L+ + Sbjct: 47 RVLDLYAGSGSLAIEAISRG-MEEAVLVERDRRAQAIISENIQMTKEPERFDLLKMESGR 105 Query: 160 SVE---GLFDVIVSNPPYI-ESVIVDCLGLEVRDF-----------DPRISLDGGIDGLS 204 ++E G FD+++ +PPY E ++ D LE R D + L I GL Sbjct: 106 ALEILTGAFDLVLLDPPYAKEQIVEDLEKLEERQLLGQDVLVVCETDKEVELPEEIAGLG 165 Query: 205 HYRTIADGVSR 215 ++ G+S+ Sbjct: 166 IWKQKIYGISK 176 >gi|312968571|ref|ZP_07782780.1| ribosomal RNA large subunit methyltransferase G [Escherichia coli 2362-75] gi|312286789|gb|EFR14700.1| ribosomal RNA large subunit methyltransferase G [Escherichia coli 2362-75] Length = 378 Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust. Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 3/77 (3%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS--ERFDTLQSDWF 158 I+DLG G G + L LL ++P K V VD S A+ ++ N TN +R + + ++ Sbjct: 232 IVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPESLDRCEFMINNAL 291 Query: 159 SSVEGL-FDVIVSNPPY 174 S VE F+ ++ NPP+ Sbjct: 292 SGVEPFRFNAVLCNPPF 308 >gi|300916708|ref|ZP_07133424.1| methyltransferase small domain protein [Escherichia coli MS 115-1] gi|300416003|gb|EFJ99313.1| methyltransferase small domain protein [Escherichia coli MS 115-1] Length = 409 Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust. Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 4/91 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS--ERFDTLQSDWF 158 I+DLG G G + L LL ++P K V VD S A+ ++ N TN +R + + ++ Sbjct: 263 IVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNAL 322 Query: 159 SSVEGL-FDVIVSNPPYIES-VIVDCLGLEV 187 S VE F+ ++ NPP+ + + D + E+ Sbjct: 323 SGVEPFRFNAVLCNPPFHQQHALTDNVAWEM 353 >gi|209759094|gb|ACI77859.1| putative enzyme [Escherichia coli] Length = 388 Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust. Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 4/91 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS--ERFDTLQSDWF 158 I+DLG G G + L LL ++P K V VD S A+ ++ N TN +R + + ++ Sbjct: 242 IVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNAL 301 Query: 159 SSVEGL-FDVIVSNPPYIES-VIVDCLGLEV 187 S VE F+ ++ NPP+ + + D + E+ Sbjct: 302 SGVEPFRFNAVLCNPPFHQQHALTDNVAWEM 332 >gi|24212798|ref|NP_710279.1| tRNA (uracil-5-)-methyltransferase [Leptospira interrogans serovar Lai str. 56601] gi|50401585|sp|Q8F9U1|Y098_LEPIN RecName: Full=Uncharacterized RNA methyltransferase LA_0098 gi|24193445|gb|AAN47297.1| tRNA (uracil-5-)-methyltransferase [Leptospira interrogans serovar Lai str. 56601] Length = 415 Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust. Identities = 39/125 (31%), Positives = 61/125 (48%), Gaps = 12/125 (9%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDT--LQSD 156 RIL+L G+G + +AL +S +G +IS ++ AK N + NG+S F T L++D Sbjct: 271 RILELYCGSGLIAIAL--KSKTTSWLGYEISSDCVQQAKRNVLLNGISSCDFKTLNLETD 328 Query: 157 WFSSVEGLFDVI-VSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215 W S E L + NPP L +V + S +G + ++ T+ +S Sbjct: 329 WIDSEEVLNSSFWIMNPPRA------GLSKKVLQTLIKTSPNGFLYSSCNHTTLVRDLSL 382 Query: 216 HLNKD 220 LNKD Sbjct: 383 FLNKD 387 >gi|261825063|pdb|3JWH|A Chain A, Crystal Structure Analysis Of The Methyltransferase Domain Of Bacterial-Avhen1-C gi|261825064|pdb|3JWH|B Chain B, Crystal Structure Analysis Of The Methyltransferase Domain Of Bacterial-Avhen1-C Length = 217 Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust. Identities = 23/70 (32%), Positives = 40/70 (57%), Gaps = 7/70 (10%) Query: 77 ETELLVDSALAFSLPRI-------EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129 E E V+ ++ + R+ ++ + R++DLG G G + LLK+S F + GVD+ Sbjct: 2 EEEAAVEKPISLNQQRMNGVVAALKQSNARRVIDLGCGQGNLLKILLKDSFFEQITGVDV 61 Query: 130 SCKALEIAKS 139 S ++LEIA+ Sbjct: 62 SYRSLEIAQE 71 >gi|229470425|sp|Q0T0I4|RLMG_SHIF8 RecName: Full=Ribosomal RNA large subunit methyltransferase G; AltName: Full=23S rRNA m2G1835 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rlmG gi|332753146|gb|EGJ83530.1| ribosomal RNA large subunit methyltransferase G [Shigella flexneri 4343-70] gi|333000107|gb|EGK19690.1| ribosomal RNA large subunit methyltransferase G [Shigella flexneri K-218] Length = 378 Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust. Identities = 30/97 (30%), Positives = 51/97 (52%), Gaps = 4/97 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS--ERFDTLQSDWF 158 I+DLG G G + L LL ++P K V VD S A+ ++ N TN +R + + ++ Sbjct: 232 IVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRSEFMINNAL 291 Query: 159 SSVEGL-FDVIVSNPPYIES-VIVDCLGLEVRDFDPR 193 S VE F+ ++ NPP+ + + D + E+ + R Sbjct: 292 SGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHYARR 328 >gi|156848589|ref|XP_001647176.1| hypothetical protein Kpol_1036p63 [Vanderwaltozyma polyspora DSM 70294] gi|156117860|gb|EDO19318.1| hypothetical protein Kpol_1036p63 [Vanderwaltozyma polyspora DSM 70294] Length = 220 Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust. Identities = 44/165 (26%), Positives = 80/165 (48%), Gaps = 13/165 (7%) Query: 72 FEPRPETELLVDSALAFSLPRIEK-RDVVRILDLGTGTGAVCLALLKES-PFFKG---VG 126 +EP ++ LL+D+ +EK +V + + G G+G V +++ P + Sbjct: 15 YEPSEDSFLLLDALEKEQGYLVEKFNGLVLVCEFGPGSGIVTTFMIQNRIPVGLNSVYLA 74 Query: 127 VDISCKA----LEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVD 181 VD+S A LE AK N G DT+Q + + + + DV++ NPPY+ + V Sbjct: 75 VDVSPWAVEATLETAKLNNCDKGTV--LDTVQGNLGTGLRKNQVDVLLFNPPYVPAEEVP 132 Query: 182 CLGLEVRDFDP-RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225 + D+ ++LDGG DG+ + + D + L+K+G+ + Sbjct: 133 EVPESKDDYKWLDLALDGGEDGMVVTQKVLDNLDSILSKNGVAYI 177 >gi|332998693|gb|EGK18289.1| ribosomal RNA large subunit methyltransferase G [Shigella flexneri VA-6] gi|332999849|gb|EGK19433.1| ribosomal RNA large subunit methyltransferase G [Shigella flexneri K-272] gi|333015719|gb|EGK35058.1| ribosomal RNA large subunit methyltransferase G [Shigella flexneri K-227] Length = 378 Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust. Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 4/91 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS--ERFDTLQSDWF 158 I+DLG G G + L LL ++P K V VD S A+ ++ N TN +R + + ++ Sbjct: 232 IVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRSEFMINNAL 291 Query: 159 SSVEGL-FDVIVSNPPYIES-VIVDCLGLEV 187 S VE F+ ++ NPP+ + + D + E+ Sbjct: 292 SGVEPFRFNAVLCNPPFHQQHALTDNVAWEM 322 >gi|281201671|gb|EFA75879.1| hypothetical protein PPL_10451 [Polysphondylium pallidum PN500] Length = 324 Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust. Identities = 51/202 (25%), Positives = 89/202 (44%), Gaps = 25/202 (12%) Query: 46 LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLG 105 L +E LG +D+ NV +EP ++ L +D AL + ++ + +++G Sbjct: 114 LPNEPNMSHLGSKDYQNV--------YEPAQDSFLFID-ALKKDVEYLKGLRPLVAVEIG 164 Query: 106 TGTGAVCL---ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162 +G+G V LL +F + DI+ A + A N V R D + + + S ++ Sbjct: 165 SGSGFVISYLSMLLNNDGYF--LSTDINPIAAMTSTRTATHNNV--RLDVVNTSFLSGID 220 Query: 163 ---GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 G DV++ NPPY+ + E+ S GGIDG + +S L++ Sbjct: 221 RLLGNVDVLLFNPPYVPTP-----SEEIEQGGIAASWAGGIDGREVIDKLLPQISNILSE 275 Query: 220 DG-LCSVEIGYNQKVDVVRIFE 240 G V + N+ +VV I + Sbjct: 276 KGCFYIVLVEENKPAEVVAIMK 297 >gi|320200139|gb|EFW74728.1| putative methyltransferase [Escherichia coli EC4100B] Length = 245 Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust. Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 5/89 (5%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 V R LD+G G+G + L L + + + V++ +A A+ N + +ER + +D Sbjct: 45 VKRCLDIGAGSGLLALMLAQRTSDSVIIDAVELESEAAAQAQENINQSPWAERINVHTAD 104 Query: 157 ---WFSSVEGLFDVIVSNPPYIESVIVDC 182 W + FD+I+SNPPY + V+C Sbjct: 105 IQQWITQQTVRFDLIISNPPYYQQG-VEC 132 >gi|308171997|ref|YP_003918702.1| ribosomal RNA methyltransferase [Bacillus amyloliquefaciens DSM 7] gi|307604861|emb|CBI41232.1| ribosomal RNA methyltransferase [Bacillus amyloliquefaciens DSM 7] gi|328551807|gb|AEB22299.1| ribosomal RNA methyltransferase [Bacillus amyloliquefaciens TA208] gi|328910068|gb|AEB61664.1| ribosomal RNA methyltransferase [Bacillus amyloliquefaciens LL3] Length = 201 Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust. Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 7/89 (7%) Query: 87 AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146 AF P I+ LD G G G + L+L E +D++ +A+E++ NA NG+ Sbjct: 52 AFEEPEIDGD----FLDAGCGYGPIGLSLAGEFTDRTVHMIDVNERAVELSNENAEKNGI 107 Query: 147 SERFDTLQSDWFSSVEG--LFDVIVSNPP 173 + QSD FS+++ F I++NPP Sbjct: 108 -KNVRIYQSDLFSNIDSAQTFASIITNPP 135 >gi|284991436|ref|YP_003409990.1| methylase of polypeptide chain release factors-like protein [Geodermatophilus obscurus DSM 43160] gi|284064681|gb|ADB75619.1| Methylase of polypeptide chain release factors-like protein [Geodermatophilus obscurus DSM 43160] Length = 238 Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust. Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 4/81 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF-- 158 +++LGTG ++ P + DIS ++E A+ N GV++R+ D+F Sbjct: 35 VVELGTGDATAIADVVAGLPELRVRSFDISAPSVERARENIAARGVADRYTVEFGDFFDR 94 Query: 159 --SSVEGLFDVIVSNPPYIES 177 S+ +++NPPYI + Sbjct: 95 ADSAAGPSASTVIANPPYIPA 115 >gi|186686438|ref|YP_001869634.1| methyltransferase type 11 [Nostoc punctiforme PCC 73102] gi|186468890|gb|ACC84691.1| Methyltransferase type 11 [Nostoc punctiforme PCC 73102] Length = 295 Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust. Identities = 38/138 (27%), Positives = 67/138 (48%), Gaps = 5/138 (3%) Query: 35 RFFLTNAIVRSL-KHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRI 93 RF + I+ S ++ H I G YN ++ T P E +V AL ++ ++ Sbjct: 41 RFRRDDVIIPSYYSSQNFHGITGGYLTYNAAVSYDPITQYVVPPNETIVRQALIDAV-KV 99 Query: 94 EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153 + R RILDLG GTG+ L L + P + +G+D+S L A+ A +G+ + Sbjct: 100 KPR---RILDLGCGTGSTTLMLKRAFPEAEVIGLDLSPYMLVRAEDKARNSGLEIVWRHG 156 Query: 154 QSDWFSSVEGLFDVIVSN 171 ++ S + FD++ ++ Sbjct: 157 NAEKTSFRDATFDLVTAS 174 >gi|332304898|ref|YP_004432749.1| methyltransferase small [Glaciecola agarilytica 4H-3-7+YE-5] gi|332172227|gb|AEE21481.1| methyltransferase small [Glaciecola agarilytica 4H-3-7+YE-5] Length = 383 Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust. Identities = 36/115 (31%), Positives = 54/115 (46%), Gaps = 21/115 (18%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA--------------VTNG 145 RI+DLG G G + L +L +SP VD S A+ AK N V+N Sbjct: 235 RIIDLGCGNGVLGLHVLHQSPDAHVTFVDESFMAIASAKMNIEQNMPDKLKQCEFLVSNC 294 Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSNPPY-IESVIVDCLGLEVRDFDPRISLDGG 199 + E T +D +SV D+++ NPP+ ++ I D + L++ RI GG Sbjct: 295 LDEYLRTPAND--ASV----DIVLCNPPFHQQNTITDHIALQMFKDSKRILKHGG 343 >gi|320353479|ref|YP_004194818.1| methyltransferase small [Desulfobulbus propionicus DSM 2032] gi|320121981|gb|ADW17527.1| methyltransferase small [Desulfobulbus propionicus DSM 2032] Length = 261 Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust. Identities = 30/99 (30%), Positives = 47/99 (47%), Gaps = 10/99 (10%) Query: 82 VDSALA--FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKS 139 VD+ LA F+ PR +R +LDLG G G + L L V +++ + + + Sbjct: 40 VDAVLAAHFAAPRAGER----LLDLGCGCGVIGLILAHRHAHIAVVSLELQEELAALTEE 95 Query: 140 NAVTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPY 174 N+ NG +R ++ D + E L D +V NPPY Sbjct: 96 NSRLNGFGDRLRVVRGDVRTVGEVLPPESVDWVVCNPPY 134 >gi|300864318|ref|ZP_07109195.1| UbiE/COQ5 methyltransferase (modular protein) [Oscillatoria sp. PCC 6506] gi|300337683|emb|CBN54341.1| UbiE/COQ5 methyltransferase (modular protein) [Oscillatoria sp. PCC 6506] Length = 334 Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust. Identities = 19/74 (25%), Positives = 40/74 (54%), Gaps = 2/74 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE--RFDTLQSDW 157 +ILD GTGT + + + + P ++ +G+D+S L++ + N G+ + + + + Sbjct: 160 KILDAGTGTARIPIIMRQMRPQWQVIGIDLSANMLKVGQENVEKAGMRSQIQLELIDAKK 219 Query: 158 FSSVEGLFDVIVSN 171 + FD++VSN Sbjct: 220 MPYPDNHFDLVVSN 233 >gi|293374642|ref|ZP_06620957.1| methyltransferase small domain protein [Turicibacter sanguinis PC909] gi|325845438|ref|ZP_08168731.1| methyltransferase small domain protein [Turicibacter sp. HGF1] gi|292646732|gb|EFF64727.1| methyltransferase small domain protein [Turicibacter sanguinis PC909] gi|325488544|gb|EGC90960.1| methyltransferase small domain protein [Turicibacter sp. HGF1] Length = 254 Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust. Identities = 33/99 (33%), Positives = 45/99 (45%), Gaps = 6/99 (6%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 +DS L P I K V I+DL TG V L L S GV+I + ++A N Sbjct: 33 LDSTLLGDYPTINK-GVKSIVDLCTGNAPVPLFLSLRSKAHI-TGVEIQDMSYDLATRNV 90 Query: 142 VTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPYIE 176 NG+ +R ++ D E L DV+ NPPY + Sbjct: 91 AVNGLEDRITIVKGDLKGIHEQLGKYAHDVVTCNPPYFK 129 >gi|291562843|emb|CBL41659.1| Predicted O-methyltransferase [butyrate-producing bacterium SS3/4] Length = 245 Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust. Identities = 23/80 (28%), Positives = 41/80 (51%), Gaps = 4/80 (5%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+LDLGTGTG + L L ++ ++I + +A+ + N + E+ + + D Sbjct: 48 RVLDLGTGTGIIPLLLSAKTEGEHFSALEIQDEIARMAERSIKLNHLEEKIEIVHGDIKE 107 Query: 160 SVE----GLFDVIVSNPPYI 175 + FDV+ +NPPY+ Sbjct: 108 ASRIFGAASFDVVTTNPPYM 127 >gi|260772190|ref|ZP_05881106.1| putative methyltransferase [Vibrio metschnikovii CIP 69.14] gi|260611329|gb|EEX36532.1| putative methyltransferase [Vibrio metschnikovii CIP 69.14] Length = 377 Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust. Identities = 32/92 (34%), Positives = 48/92 (52%), Gaps = 7/92 (7%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQS---D 156 I+DLG G G + + L + +P K + VD S A+E AK N N S+ RF+ L + D Sbjct: 234 IIDLGCGNGVLSVKLGQLNPQAKIISVDESFMAVESAKRNLEKNLSSQHRFECLTNNCLD 293 Query: 157 WFSSVEGLFDVIVSNPPY-IESVIVDCLGLEV 187 F +F IV NPP+ + I D + ++ Sbjct: 294 GFPDHSTMF--IVCNPPFHQQQAITDHIAWQM 323 >gi|254303806|ref|ZP_04971164.1| possible O-methyltransferase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148323998|gb|EDK89248.1| possible O-methyltransferase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 243 Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust. Identities = 35/117 (29%), Positives = 59/117 (50%), Gaps = 12/117 (10%) Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 N+++ SD F +DS L I K++ +ILDLGTG A+ L L K++ Sbjct: 15 NLKIIQRSDYFN------FSIDSLLISEFVSI-KKNTKKILDLGTGNAAIPLFLSKKTS- 66 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSER----FDTLQSDWFSSVEGLFDVIVSNPPY 174 K G++I + +A N N ++E+ +D +++ G FD ++SNPP+ Sbjct: 67 AKIYGIEIQEISYNLALRNININNLNEQIYIIYDNMKNYLKHFNIGSFDTVISNPPF 123 >gi|170735747|ref|YP_001777007.1| methyltransferase type 11 [Burkholderia cenocepacia MC0-3] gi|169817935|gb|ACA92517.1| Methyltransferase type 11 [Burkholderia cenocepacia MC0-3] Length = 282 Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust. Identities = 21/53 (39%), Positives = 32/53 (60%), Gaps = 1/53 (1%) Query: 99 VRILDLGTGTGAVCLALLKE-SPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150 R+LD+G GTGAV LA+ + + G+DIS + ++ A++ A GV RF Sbjct: 50 TRVLDVGCGTGAVTLAVARRLGASAQCTGIDISARMIDAARARAERGGVPARF 102 >gi|300937979|ref|ZP_07152761.1| methyltransferase small domain protein [Escherichia coli MS 21-1] gi|300457020|gb|EFK20513.1| methyltransferase small domain protein [Escherichia coli MS 21-1] Length = 378 Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust. Identities = 27/78 (34%), Positives = 43/78 (55%), Gaps = 3/78 (3%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS--ERFDTLQSDW 157 I+DLG G G + L LL ++P K V VD S A+ ++ N TN +R + + ++ Sbjct: 231 EIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNA 290 Query: 158 FSSVEGL-FDVIVSNPPY 174 S VE F+ ++ NPP+ Sbjct: 291 LSGVEPFRFNAVLCNPPF 308 >gi|262527564|sp|P44702|TRMN6_HAEIN RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName: Full=tRNA m6A37 methyltransferase Length = 232 Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust. Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 4/84 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD--- 156 ILD+G GTG + L L + + + V++ A + A+ N + R Q D Sbjct: 39 ILDMGCGTGLLALMLAQRTEENCQIQAVELDPIAAKQAQENINNSVWKNRIQLTQVDIQH 98 Query: 157 WFSSVEGLFDVIVSNPPYIESVIV 180 + + E FD+IV+NPPY E I Sbjct: 99 FLQTTEQTFDLIVANPPYFEQGIA 122 >gi|257463625|ref|ZP_05628016.1| ribosomal RNA small subunit methyltransferase C [Fusobacterium sp. D12] Length = 221 Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust. Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 4/77 (5%) Query: 102 LDLGTGTGAVCLALLKESPFFKG--VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 L++GTG G + + LL + F VDI +++AK NA NGVS RF FS Sbjct: 46 LEIGTGNGILPI-LLSQRGFVSKEYCAVDILESNIDLAKQNAENNGVSARFVCQDIRNFS 104 Query: 160 SVEGLFDVIVSNPPYIE 176 + + I +NPPY++ Sbjct: 105 E-KNAYTQIFANPPYMK 120 >gi|240103955|ref|YP_002960264.1| 23S rRNA (uracil-5-)-methyltransferase (rumA) [Thermococcus gammatolerans EJ3] gi|239911509|gb|ACS34400.1| 23S rRNA (uracil-5-)-methyltransferase (rumA) [Thermococcus gammatolerans EJ3] Length = 421 Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust. Identities = 37/140 (26%), Positives = 66/140 (47%), Gaps = 8/140 (5%) Query: 36 FFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPR-IE 94 ++ N + + I R G ++F ++ L + P + +S A L R + Sbjct: 218 YWSVNRTPSDVSYGEIERFWG-KEF--IKEELDGTVYLIHPNSFFQTNSYGAVELLREVA 274 Query: 95 KR-DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153 KR + R+LDL +G G + L ++ F G++I+ A+E+A NA NGV RF Sbjct: 275 KRAEGGRVLDLYSGVGTFGVYLARKG--FSVEGIEINPFAVEMANRNAEINGVEARFRVG 332 Query: 154 QSDWFSSVEGLFDVIVSNPP 173 S++ +D ++ +PP Sbjct: 333 ADKDVGSLQA-YDTVIVDPP 351 >gi|229173546|ref|ZP_04301089.1| Methyltransferase type 11 [Bacillus cereus MM3] gi|228609928|gb|EEK67207.1| Methyltransferase type 11 [Bacillus cereus MM3] Length = 261 Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust. Identities = 28/86 (32%), Positives = 44/86 (51%), Gaps = 5/86 (5%) Query: 86 LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG-VGVDISCKALEIAKSNAVTN 144 L + + ++E R R+LD+ TG G V L +P FK V +D++ K LE AK+ ++N Sbjct: 30 LQYVVQQVESRHNNRLLDIATGGGHVANVL---APLFKEVVALDLTEKMLENAKNFIISN 86 Query: 145 GVSE-RFDTLQSDWFSSVEGLFDVIV 169 G F ++ +G FD I Sbjct: 87 GYENVSFVAGNAESLPFADGFFDTIT 112 >gi|225619640|ref|YP_002720897.1| adenine/cytosine DNA methyltransferase [Brachyspira hyodysenteriae WA1] gi|225214459|gb|ACN83193.1| adenine/cytosine DNA methyltransferase [Brachyspira hyodysenteriae WA1] Length = 812 Score = 40.4 bits (93), Expect = 0.23, Method: Composition-based stats. Identities = 31/113 (27%), Positives = 59/113 (52%), Gaps = 11/113 (9%) Query: 90 LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAK----SNAVTNG 145 LP +DV+RIL+ G G+ L+K+ ++G ++I C ++I N N Sbjct: 441 LPEFSNKDVIRILEPSCGIGSFLPQLIKK---YQGKKLEIDCIDIDIENISIAKNIFFND 497 Query: 146 VSERFDTLQSDW-FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197 + F+ + +D+ ++ +D++V NPP+ ++I D L R++ R SL+ Sbjct: 498 NNITFNFINADFLLCDLDKKYDIVVGNPPF-GNIIKDKKLL--REYKKRSSLN 547 >gi|206901995|ref|YP_002249964.1| methyltransferase [Dictyoglomus thermophilum H-6-12] gi|206741098|gb|ACI20156.1| methyltransferase [Dictyoglomus thermophilum H-6-12] Length = 395 Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust. Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 7/83 (8%) Query: 97 DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 D +LD+ TG L LK K + VD S ALE+AK NA NG ++ + ++ + Sbjct: 217 DGAEVLDVFCYTGGFSLHALKYGAS-KVIAVDSSSTALEMAKENAKINGFIDKIEFIEEN 275 Query: 157 WFSSV-----EG-LFDVIVSNPP 173 F + EG FDV++ +PP Sbjct: 276 AFDLLRRFHKEGKTFDVVILDPP 298 >gi|51891645|ref|YP_074336.1| ribosomal protein L11 methyltransferase [Symbiobacterium thermophilum IAM 14863] gi|60390360|sp|Q67S51|PRMA_SYMTH RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11 Mtase gi|51855334|dbj|BAD39492.1| ribosomal protein L11 methyltransferase [Symbiobacterium thermophilum IAM 14863] Length = 304 Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust. Identities = 33/86 (38%), Positives = 47/86 (54%), Gaps = 9/86 (10%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS--ERFDTLQSDW 157 R++D+GTG+G + +A K + V +D+ A++ A+ NA NGV R TL Sbjct: 172 RVIDVGTGSGILAVA-AKHLGAAEVVAIDVDPVAVDAARENAGRNGVEIDVRLATLD--- 227 Query: 158 FSSVEGLFDVIVSNPPYIESVIVDCL 183 EG D+IV+N I SVIVD L Sbjct: 228 -QVAEGEADLIVAN--IIASVIVDIL 250 >gi|325685704|gb|EGD27783.1| methyltransferase domain protein [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 200 Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust. Identities = 40/143 (27%), Positives = 68/143 (47%), Gaps = 14/143 (9%) Query: 34 QRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRP---ETELLVDSALAFSL 90 +++F N V +H +R+ G N+ LT + F + LL++ L L Sbjct: 3 EQYFTENPTVDHDEHHVNYRLNG----INLNLTTDAGVFSKNRVDYGSGLLIEQMLDQEL 58 Query: 91 PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150 P ILD+G G G + L K+ P + VD++ +A+++A+ NA N + Sbjct: 59 PG------GNILDVGCGYGPIGLFAAKKWPGRQVDMVDVNERAMDLARRNAAAN-GAGNV 111 Query: 151 DTLQSDWFSSVEGLFDVIVSNPP 173 + SD + V G + +IV+NPP Sbjct: 112 NIFASDRYQEVSGQYAMIVTNPP 134 >gi|255647950|gb|ACU24432.1| unknown [Glycine max] Length = 234 Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust. Identities = 53/209 (25%), Positives = 89/209 (42%), Gaps = 32/209 (15%) Query: 69 SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAV----CLALLKESPFFKG 124 + +EP ++ LVD+ LA +E + +++G G+G V L L +E Sbjct: 20 QEVYEPCDDSFALVDALLADRNNLLEHHPTL-CMEIGCGSGYVITSLALILGQEVCGINY 78 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIESVIV 180 + DI+ A+ + +GV + +D S +E GL DV+V NPPY+ + Sbjct: 79 IATDINPHAVRVTHETLEAHGVGAEL--IVTDIASGLEDRLAGLVDVMVVNPPYVPTP-E 135 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG--------------LCSV- 225 D +G+E S GG +G S I R L++ G +C Sbjct: 136 DEVGVE----GITSSWAGGENGRSVINKILPVADRLLSEKGWLYMVTLTENNPFEICHQM 191 Query: 226 -EIGYNQKVDVVRIFESRKLFLVNAFKDY 253 + GY K+ V R E L ++ ++D+ Sbjct: 192 RKKGYASKIVVQRSTEEESLHIIKFWRDF 220 >gi|168984589|emb|CAQ12137.1| HemK methyltransferase family member 1 [Mus musculus] Length = 121 Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust. Identities = 31/102 (30%), Positives = 50/102 (49%), Gaps = 9/102 (8%) Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL---SHYRTIADGVSRHLNKDG 221 D++VSNPPYI ++ L E+ ++ ++LDGG +G+ +H T+A + LN G Sbjct: 16 LDLVVSNPPYIFRKDMEQLAPEICSYEDLVALDGGDEGMDIITHILTLAPQL---LNASG 72 Query: 222 LCSVEIGYNQKVDVVRIFESRK---LFLVNAFKDYGGNDRVL 260 +E+ V +S L LV +D+ G R L Sbjct: 73 SIFLEVDPRHPELVSSWLQSHPDLHLSLVGVREDFCGRPRFL 114 >gi|55377169|ref|YP_135019.1| protporphyrinogen oxidase [Haloarcula marismortui ATCC 43049] gi|55229894|gb|AAV45313.1| protporphyrinogen oxidase [Haloarcula marismortui ATCC 43049] Length = 208 Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust. Identities = 32/106 (30%), Positives = 51/106 (48%), Gaps = 15/106 (14%) Query: 72 FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131 ++P +++LL +A R+E D V LD+GTG+G V L + VGVD+S Sbjct: 32 YQPAEDSDLLARTARE----RVEAGDTV--LDVGTGSGYVAATLADAG--ARAVGVDVSP 83 Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIES 177 A A N V + + ++D FD++ NPPY+ + Sbjct: 84 LACREAAENGVPVVRGDLVEPFRAD-------AFDLVAFNPPYLPT 122 >gi|315172562|gb|EFU16579.1| type I restriction-modification system, M subunit [Enterococcus faecalis TX1346] Length = 537 Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust. Identities = 28/90 (31%), Positives = 41/90 (45%), Gaps = 9/90 (10%) Query: 94 EKRDVVRILDLGTGTGAVCLAL---LKESPFFKGVGVDISCKALEIAKSNAVTNGV-SER 149 E R I D G+G++ L + L G +++ +A+ N + +GV ER Sbjct: 219 ETRAPFHIYDPAMGSGSLMLNIRRYLTNPDQVHYHGQELNTTTFNLARMNLILHGVDKER 278 Query: 150 F-----DTLQSDWFSSVEGLFDVIVSNPPY 174 DTL +DW S FD +V NPPY Sbjct: 279 MNLNNGDTLDADWPSEEPYQFDSVVMNPPY 308 >gi|312872218|ref|ZP_07732291.1| methyltransferase small domain protein [Lactobacillus iners LEAF 2062A-h1] gi|311092302|gb|EFQ50673.1| methyltransferase small domain protein [Lactobacillus iners LEAF 2062A-h1] Length = 204 Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust. Identities = 25/75 (33%), Positives = 43/75 (57%), Gaps = 3/75 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 ILD+GTG G + L K P + +D++ +AL +AK NA N + + + SD + + Sbjct: 65 ILDVGTGYGPLGLFAAKLWPKSRVTMIDVNERALALAKRNAQLNEI-DNVNIFSSDCYRN 123 Query: 161 V--EGLFDVIVSNPP 173 + + F +I++NPP Sbjct: 124 LDEQEQFGLILTNPP 138 >gi|307946011|ref|ZP_07661346.1| ribosomal RNA small subunit methyltransferase C [Roseibium sp. TrichSKD4] gi|307769675|gb|EFO28901.1| ribosomal RNA small subunit methyltransferase C [Roseibium sp. TrichSKD4] Length = 351 Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust. Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 1/83 (1%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGV-DISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 R DLG G G + LL+++P + + + +AL++A+ N ++ + SD Sbjct: 202 RGADLGAGFGVLSRHLLEKAPKVTALDLYEAEKRALDLAQENLASDRDKVTLTGIWSDVT 261 Query: 159 SSVEGLFDVIVSNPPYIESVIVD 181 +EG +D IV NPP+ ++ D Sbjct: 262 KGIEGPYDFIVMNPPFHQTGKAD 284 >gi|261403492|ref|YP_003247716.1| methyltransferase small [Methanocaldococcus vulcanius M7] gi|261370485|gb|ACX73234.1| methyltransferase small [Methanocaldococcus vulcanius M7] Length = 196 Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust. Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 8/77 (10%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGV-DISCKALEIAKSNAVTNGVSERFD--TLQSDW 157 ILDLG G G + +AL E K V + DI+ +A+++AK N N + E +D + SD Sbjct: 59 ILDLGCGYGVIGIALADE---VKSVTMADINRRAIKLAKENIKLNNL-ENYDIRVVHSDL 114 Query: 158 FSSVEG-LFDVIVSNPP 173 + +V+ +D I++NPP Sbjct: 115 YENVKDRKYDKIITNPP 131 >gi|284033968|ref|YP_003383899.1| methyltransferase small [Kribbella flavida DSM 17836] gi|283813261|gb|ADB35100.1| methyltransferase small [Kribbella flavida DSM 17836] Length = 206 Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust. Identities = 28/73 (38%), Positives = 36/73 (49%), Gaps = 3/73 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER-FDTLQSDWFS 159 +LDLG G G + L E+P VD++ +ALE+ NA GV +R L D Sbjct: 62 VLDLGAGYGPIACGLAVENPDAVVWAVDVNNRALELTAINAAAAGVGDRVHPALPDDVPD 121 Query: 160 SVEGLFDVIVSNP 172 V FD I SNP Sbjct: 122 DVR--FDEIWSNP 132 >gi|153835710|ref|ZP_01988377.1| ribosomal protein L11 methyltransferase [Vibrio harveyi HY01] gi|148867643|gb|EDL66931.1| ribosomal protein L11 methyltransferase [Vibrio harveyi HY01] Length = 295 Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust. Identities = 33/112 (29%), Positives = 58/112 (51%), Gaps = 17/112 (15%) Query: 74 PRPET-ELLVDSALAFS----------LPRIEKRDVV--RILDLGTGTGAVCLALLKESP 120 P P+ +++D LAF L +E D+ ++D G G+G + +A +K Sbjct: 123 PEPDAVNVMLDPGLAFGTGTHPTTALCLEWLEGLDLSGKTVIDFGCGSGILAIAAIKLG- 181 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF-DVIVSN 171 K +G+DI +AL+ ++ NA NGV+++ + + EGL DV+V+N Sbjct: 182 AEKVIGIDIDPQALQASRDNAERNGVADQLEVFLPQ--NQPEGLIADVVVAN 231 >gi|74313138|ref|YP_311557.1| hypothetical protein SSON_2701 [Shigella sonnei Ss046] gi|73856615|gb|AAZ89322.1| putative enzyme [Shigella sonnei Ss046] Length = 285 Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust. Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 5/89 (5%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 V R LD+G G+G + L L + + + V++ +A A+ N + +ER + +D Sbjct: 85 VKRCLDIGAGSGLLALMLAQRTSDSVIIDAVELESEAAAQAQENINQSPWAERINVHTAD 144 Query: 157 ---WFSSVEGLFDVIVSNPPYIESVIVDC 182 W + FD+I+SNPPY + V+C Sbjct: 145 IQQWLTQQTVRFDLIISNPPYYQQG-VEC 172 >gi|56751193|ref|YP_171894.1| hypothetical protein syc1184_c [Synechococcus elongatus PCC 6301] gi|140216|sp|P08442|Y1184_SYNP6 RecName: Full=Uncharacterized protein syc1184_c gi|48010|emb|CAA28921.1| unnamed protein product [Synechococcus elongatus PCC 6301] gi|56686152|dbj|BAD79374.1| hypothetical protein [Synechococcus elongatus PCC 6301] Length = 417 Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust. Identities = 40/144 (27%), Positives = 55/144 (38%), Gaps = 6/144 (4%) Query: 27 DSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL 86 DS L R RF A+ S+ + D Y D P SA Sbjct: 5 DSTLLGRSRFSFFAAMPDSVTQA----VSALYDAYPFPPEPMQDGPPPGYNWRWHYPSAY 60 Query: 87 AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146 AF R + RILD G GTG L +P + +DIS L +A+ +GV Sbjct: 61 AFCTGRAPQLGRPRILDAGCGTGVSTDYLAHLNPSAEITAIDISAGTLAVAQERCQRSGV 120 Query: 147 SERFDTLQSDWF--SSVEGLFDVI 168 ++R Q + + + G FD I Sbjct: 121 ADRIHFQQLSLYDVAQLPGEFDQI 144 >gi|323352768|ref|ZP_08087738.1| ribosomal RNA small subunit methyltransferase D [Streptococcus sanguinis VMC66] gi|322121804|gb|EFX93550.1| ribosomal RNA small subunit methyltransferase D [Streptococcus sanguinis VMC66] Length = 182 Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust. Identities = 35/131 (26%), Positives = 59/131 (45%), Gaps = 16/131 (12%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+LDL G+G++ + + + V V+ +A I N ERFD L+ + Sbjct: 47 RVLDLYAGSGSLAIEAISRG-MEEAVLVEKDRRAQAIISENIQMTKEPERFDLLKMESGR 105 Query: 160 SVE---GLFDVIVSNPPYI-ESVIVDCLGLEVRDF-----------DPRISLDGGIDGLS 204 ++E G FD+++ +PPY E ++ D LE R D + L I GL Sbjct: 106 ALEMLTGSFDLVLLDPPYAKEQIVEDLEKLEERQLLSQDVLVVCETDKEVKLPEEIAGLG 165 Query: 205 HYRTIADGVSR 215 ++ G+S+ Sbjct: 166 IWKQKIYGISK 176 >gi|297527555|ref|YP_003669579.1| putative RNA methylase [Staphylothermus hellenicus DSM 12710] gi|297256471|gb|ADI32680.1| putative RNA methylase [Staphylothermus hellenicus DSM 12710] Length = 160 Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust. Identities = 21/59 (35%), Positives = 32/59 (54%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 + DLG G G + + +KE K VG+D + + A+ NA NGVS+R + D F+ Sbjct: 30 VYDLGCGDGRILIIAVKEFNVKKAVGIDKDPERIREARKNAEKNGVSDRIVLINDDIFN 88 >gi|295401929|ref|ZP_06811892.1| methyltransferase small [Geobacillus thermoglucosidasius C56-YS93] gi|312109252|ref|YP_003987568.1| methyltransferase small [Geobacillus sp. Y4.1MC1] gi|294976059|gb|EFG51674.1| methyltransferase small [Geobacillus thermoglucosidasius C56-YS93] gi|311214353|gb|ADP72957.1| methyltransferase small [Geobacillus sp. Y4.1MC1] Length = 200 Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust. Identities = 26/73 (35%), Positives = 39/73 (53%), Gaps = 2/73 (2%) Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 LD+G G G + LA+ K P +DI+ +ALE+A N N ++ +SD F V Sbjct: 63 LDVGCGYGPIGLAVAKSFPNRHVDMIDINKRALELANENKRVNHIA-NVSIYESDLFEQV 121 Query: 162 -EGLFDVIVSNPP 173 + F I++NPP Sbjct: 122 GDKKFAAILTNPP 134 >gi|256811406|ref|YP_003128775.1| methyltransferase small [Methanocaldococcus fervens AG86] gi|256794606|gb|ACV25275.1| methyltransferase small [Methanocaldococcus fervens AG86] Length = 196 Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust. Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 8/77 (10%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGV-DISCKALEIAKSNAVTNGVSERFD--TLQSDW 157 ILDLG G G + +AL E K V + DI+ +A+++AK N N + E +D + SD Sbjct: 59 ILDLGCGYGVIGIALADE---VKSVTMADINRRAIKLAKENIKLNNL-ENYDIRVVHSDL 114 Query: 158 FSSV-EGLFDVIVSNPP 173 + +V + +D I++NPP Sbjct: 115 YENVKDKKYDKIITNPP 131 >gi|126729900|ref|ZP_01745713.1| hypothetical protein SSE37_05480 [Sagittula stellata E-37] gi|126710019|gb|EBA09072.1| hypothetical protein SSE37_05480 [Sagittula stellata E-37] Length = 406 Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust. Identities = 21/53 (39%), Positives = 32/53 (60%), Gaps = 6/53 (11%) Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPP 173 VD S AL++A++ A GV++RF T Q D F ++ L +DV+V +PP Sbjct: 261 VDGSAPALDLARAGADAMGVADRFATRQGDAFDTLTALQEDDARYDVVVCDPP 313 >gi|119486111|ref|ZP_01620171.1| hypothetical protein L8106_17247 [Lyngbya sp. PCC 8106] gi|119456602|gb|EAW37731.1| hypothetical protein L8106_17247 [Lyngbya sp. PCC 8106] Length = 297 Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust. Identities = 32/112 (28%), Positives = 55/112 (49%), Gaps = 10/112 (8%) Query: 76 PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135 P TE +V L + R++ R +ILDLG GTG+ L L + P + +G+D+S L Sbjct: 84 PPTEPIVRQGLIDRI-RVKPR---QILDLGCGTGSTTLRLKQAFPEAEVIGIDLSPYMLV 139 Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSN------PPYIESVIVD 181 +A+ A G+ +F ++ +G FD++ ++ PP + I Sbjct: 140 VAELKAKKAGLEIQFHHANAEDTGFPDGSFDLVSASLLFHETPPDVAQTITQ 191 >gi|317061177|ref|ZP_07925662.1| 16S rRNA m(2)G 1207 methyltransferase [Fusobacterium sp. D12] gi|313686853|gb|EFS23688.1| 16S rRNA m(2)G 1207 methyltransferase [Fusobacterium sp. D12] Length = 222 Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust. Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 4/77 (5%) Query: 102 LDLGTGTGAVCLALLKESPFF--KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 L++GTG G + + LL + F + VDI +++AK NA NGVS RF FS Sbjct: 47 LEIGTGNGILPI-LLSQRGFVSKEYCAVDILESNIDLAKQNAENNGVSARFVCQDIRNFS 105 Query: 160 SVEGLFDVIVSNPPYIE 176 + + I +NPPY++ Sbjct: 106 E-KNAYTQIFANPPYMK 121 >gi|309810081|ref|ZP_07703927.1| methyltransferase small domain protein [Lactobacillus iners SPIN 2503V10-D] gi|308169580|gb|EFO71627.1| methyltransferase small domain protein [Lactobacillus iners SPIN 2503V10-D] Length = 204 Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust. Identities = 25/75 (33%), Positives = 43/75 (57%), Gaps = 3/75 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 ILD+GTG G + L K P + +D++ +AL +AK NA N + + + SD + + Sbjct: 65 ILDVGTGYGPLGLFAAKLWPKSRVTMIDVNERALALAKRNAQLNEI-DNVNIFSSDCYRN 123 Query: 161 V--EGLFDVIVSNPP 173 + + F +I++NPP Sbjct: 124 LDDQEQFGLILTNPP 138 >gi|291542880|emb|CBL15990.1| Predicted N6-adenine-specific DNA methylase [Ruminococcus bromii L2-63] Length = 371 Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust. Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 1/59 (1%) Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS-SVEGLFDVIVSNPPYIESVI 179 F+ G DI AL IAK NA GV++R D +E F I++NPPY E ++ Sbjct: 252 FRATGYDIDDSALAIAKKNAEIAGVADRITFANRDIKDFELEDGFQTIITNPPYGERLL 310 >gi|302887024|ref|XP_003042401.1| hypothetical protein NECHADRAFT_72681 [Nectria haematococca mpVI 77-13-4] gi|256723311|gb|EEU36688.1| hypothetical protein NECHADRAFT_72681 [Nectria haematococca mpVI 77-13-4] Length = 340 Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust. Identities = 26/82 (31%), Positives = 35/82 (42%), Gaps = 6/82 (7%) Query: 59 DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118 D N RL L F +++ L + P V R+LDLGTGTG L E Sbjct: 70 DIENERLDLQHHLFL------YTLENKLGLAPPNDHDAKVKRVLDLGTGTGIWALDYADE 123 Query: 119 SPFFKGVGVDISCKALEIAKSN 140 P + +G+D+S E N Sbjct: 124 HPEAEVIGIDLSPTQPEFVPPN 145 >gi|269124561|ref|YP_003297931.1| methyltransferase small [Thermomonospora curvata DSM 43183] gi|268309519|gb|ACY95893.1| methyltransferase small [Thermomonospora curvata DSM 43183] Length = 484 Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust. Identities = 38/131 (29%), Positives = 59/131 (45%), Gaps = 15/131 (11%) Query: 96 RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155 R V LDLGTG G L L + D++ +AL +A+ + +G+ + + L+ Sbjct: 148 RPVDNALDLGTGCGVQALHLRDRAARI--TATDLNPRALALARLSFALSGLKD-VELLEG 204 Query: 156 DWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214 + V+ FD+IVSNPP+ VI GL R + G+ G R + G + Sbjct: 205 SLYEPVKDRRFDLIVSNPPF---VISPGGGLVYR--------ESGLPGDEVCRRLVGGAA 253 Query: 215 RHLNKDGLCSV 225 L G C + Sbjct: 254 ERLTAGGWCQM 264 >gi|191174002|ref|ZP_03035519.1| putative methyltransferase [Escherichia coli F11] gi|190905693|gb|EDV65315.1| putative methyltransferase [Escherichia coli F11] gi|323955811|gb|EGB51569.1| hypothetical protein ERLG_03075 [Escherichia coli H263] Length = 257 Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust. Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 5/89 (5%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 V R LD+G G+G + L L + + + V++ +A A+ N + +ER + +D Sbjct: 57 VKRCLDIGAGSGLLALMLAQRTDDSVMIDAVELESEAAAQAQENINQSPWAERINVHTAD 116 Query: 157 ---WFSSVEGLFDVIVSNPPYIESVIVDC 182 W + FD+I+SNPPY + V+C Sbjct: 117 ILQWITQQTVRFDLIISNPPYYQQG-VEC 144 >gi|92116762|ref|YP_576491.1| methyltransferase type 11 [Nitrobacter hamburgensis X14] gi|91799656|gb|ABE62031.1| Methyltransferase type 11 [Nitrobacter hamburgensis X14] Length = 286 Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust. Identities = 44/175 (25%), Positives = 73/175 (41%), Gaps = 17/175 (9%) Query: 57 WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLAL 115 WRD+ + T T L +D ALA + I D +L++G G G C L Sbjct: 24 WRDWASKFGTALGATTRTGTAKMLEID-ALARRMSAIGLGDAPAHVLEVGCGNGLNCFGL 82 Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVSER--FDTLQSDWFSSVEGL---FDVIVS 170 + P + G+D + + ++ A+ AV NG +R F + S+ GL +DV+ + Sbjct: 83 AAQFPRMQLDGIDYTAEMIDAAREAAVANGFQDRSSFRIGNALELSAASGLLAQYDVVFT 142 Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGI----------DGLSHYRTIADGVSR 215 + I V+ + D R+ G + D +H RT+ D +R Sbjct: 143 DRCLINIESVELQMRAITDLAARVREGGHLIMIENSMATYDRQNHCRTLLDMPAR 197 >gi|82545028|ref|YP_408975.1| enzyme [Shigella boydii Sb227] gi|81246439|gb|ABB67147.1| putative enzyme [Shigella boydii Sb227] Length = 285 Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust. Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 4/84 (4%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 V R LD+G G+G + L L + + + V++ +A A+ N + +ER + +D Sbjct: 85 VKRCLDIGAGSGLLALMLAQRTSDSVIIDAVELESEAAAQAQENINQSPWAERINVHTAD 144 Query: 157 ---WFSSVEGLFDVIVSNPPYIES 177 W + FD+I+SNPPY + Sbjct: 145 IQQWLTQQTVRFDLIISNPPYYQQ 168 >gi|82778001|ref|YP_404350.1| putative enzyme [Shigella dysenteriae Sd197] gi|81242149|gb|ABB62859.1| putative enzyme [Shigella dysenteriae Sd197] Length = 285 Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust. Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 5/89 (5%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 V R LD+G G+G + L L + + + V++ +A A+ N + +ER + +D Sbjct: 85 VKRCLDIGAGSGLLALMLAQRTDDSVMIDAVELESEAAAQAQENINQSPWAERINVHTAD 144 Query: 157 ---WFSSVEGLFDVIVSNPPYIESVIVDC 182 W + FD+I+SNPPY + V+C Sbjct: 145 IQQWITQQTVRFDLIISNPPYYQQG-VEC 172 >gi|319936707|ref|ZP_08011120.1| methyltransferase [Coprobacillus sp. 29_1] gi|319808264|gb|EFW04829.1| methyltransferase [Coprobacillus sp. 29_1] Length = 244 Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust. Identities = 38/158 (24%), Positives = 76/158 (48%), Gaps = 17/158 (10%) Query: 46 LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLG 105 + +E ++ +L + D +++ D F +D+ L S I K D+ +I+D G Sbjct: 1 MSNEVVNYLLAYND---MKIIQRKDMFN------FSLDTVLLSSFCTINK-DLHKIIDFG 50 Query: 106 TGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-- 163 T A+ L L + + + +G++I A+++A N N + + + +D V+ Sbjct: 51 TNNAAIPLLLSRRTD-KEIIGIEIQKDAVDLAIKNVKLNHLENQITIIHNDIKDYVQTSE 109 Query: 164 LFDVIVSNPPYIE----SVIVDCLGLEVRDFDPRISLD 197 F +IV NPP+ + S I + L++ + +I+LD Sbjct: 110 KFKLIVCNPPFFKVGERSHINENEYLQIARHEIKINLD 147 >gi|253565583|ref|ZP_04843038.1| conserved hypothetical protein [Bacteroides sp. 3_2_5] gi|251945862|gb|EES86269.1| conserved hypothetical protein [Bacteroides sp. 3_2_5] Length = 237 Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust. Identities = 44/151 (29%), Positives = 67/151 (44%), Gaps = 14/151 (9%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW- 157 RILD+GTGTG V L +L + + ++I A + A N + R + + D+ Sbjct: 39 ARILDIGTGTGLVAL-MLAQRCSASVIALEIDGTAAQQAAENITRSPWGSRIEVVCQDFR 97 Query: 158 -FSSVEG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214 +S+ +D IVSNPPY D L D + + D LS Y + GVS Sbjct: 98 LYSNKNNSLKYDTIVSNPPY----FTDSLKCP----DSQRNTARHNDNLS-YEELLKGVS 148 Query: 215 RHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245 L+ +G +V I + I S+ L+ Sbjct: 149 NLLSPNGTFTVVIPMDASDSFKDIASSQGLY 179 >gi|193068411|ref|ZP_03049374.1| putative methyltransferase [Escherichia coli E110019] gi|192958363|gb|EDV88803.1| putative methyltransferase [Escherichia coli E110019] Length = 257 Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust. Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 5/89 (5%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 V R LD+G G+G + L L + + + V++ +A A+ N + +ER + +D Sbjct: 57 VKRCLDIGAGSGLLALMLAQRTSDSVIIDAVELESEAAAQAQENINQSPWAERINVHTAD 116 Query: 157 ---WFSSVEGLFDVIVSNPPYIESVIVDC 182 W + FD+I+SNPPY + V+C Sbjct: 117 IQQWITQQTVRFDLIISNPPYYQQG-VEC 144 >gi|158335166|ref|YP_001516338.1| UbiE/COQ5 family methlytransferase [Acaryochloris marina MBIC11017] gi|158305407|gb|ABW27024.1| methyltransferase, UbiE/COQ5 family, putative [Acaryochloris marina MBIC11017] Length = 280 Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust. Identities = 41/148 (27%), Positives = 69/148 (46%), Gaps = 21/148 (14%) Query: 77 ETELLVDSALAFSLPRIE---KRDVV--------RILDLGTGTGAVCLALLKESPFFKGV 125 E + D+ AF+ P E +R+V+ RILDLG GTG++ L L P + + Sbjct: 69 EAAVTYDAVTAFACPPHEMNLRREVLKSIQGQPQRILDLGCGTGSMTLMLKATYPQAEVI 128 Query: 126 GVDIS----CKALEIAKSNAVT----NGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIES 177 G+D+S C A ++ +T +G++E D L++ F + + V PP I Sbjct: 129 GLDLSPYMLCHAQHKSQKAQLTIHWLHGLAEATD-LKAHSFDVI-SICMVFHEMPPRISR 186 Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSH 205 +++ ++ I LDG + L H Sbjct: 187 LVLQECRRLLKSGGQLIILDGNQNRLRH 214 >gi|126733609|ref|ZP_01749356.1| ribosomal L11 methyltransferase [Roseobacter sp. CCS2] gi|126716475|gb|EBA13339.1| ribosomal L11 methyltransferase [Roseobacter sp. CCS2] Length = 313 Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust. Identities = 32/117 (27%), Positives = 57/117 (48%), Gaps = 20/117 (17%) Query: 74 PRPETELLVDSALAFSLPR-------IEKRDVV--------RILDLGTGTGAVCLALLKE 118 P + LL+D+A+AF +E D + +ILD+G GT + +A K Sbjct: 129 PDDKIPLLIDAAMAFGTGHHGTTKGCLEAFDALLSDGFEGEKILDVGCGTAVLGMAAAKV 188 Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV----EGLFDVIVSN 171 P + DI A+E+A++N ++NG+ +R + + F + G +D+I +N Sbjct: 189 LPH-PVLASDIDPVAVEVAQANVISNGLKDRVTCVVAAGFGAPALTENGPYDLIFAN 244 >gi|68536169|ref|YP_250874.1| putative transferase [Corynebacterium jeikeium K411] gi|68263768|emb|CAI37256.1| putative transferase [Corynebacterium jeikeium K411] Length = 559 Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust. Identities = 45/145 (31%), Positives = 68/145 (46%), Gaps = 19/145 (13%) Query: 99 VRILDLGTGTG--AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV-SERFDTLQS 155 R+LDLGTG+G A+ LA E K G DI +AL A++ A G+ S + +Q Sbjct: 175 ARVLDLGTGSGVLALVLAANAEVEPPKIFGSDIHARALNYARAAAAAQGLDSPLVNWVQG 234 Query: 156 DWF-----------SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204 WF S+ FDVIV+NPP++ VD LE + + D G+ + Sbjct: 235 SWFEPFSAESADTESTEAQRFDVIVANPPFVIGPSVD---LEAEEG--HVYRDSGLPLDA 289 Query: 205 HYRTIADGVSRHLNKDGLCSVEIGY 229 + + + +HL G + IG+ Sbjct: 290 ASQLVVEQSVQHLAPGGHAHLLIGW 314 >gi|309806665|ref|ZP_07700661.1| methyltransferase small domain protein [Lactobacillus iners LactinV 03V1-b] gi|308166970|gb|EFO69153.1| methyltransferase small domain protein [Lactobacillus iners LactinV 03V1-b] Length = 204 Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust. Identities = 25/75 (33%), Positives = 43/75 (57%), Gaps = 3/75 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 ILD+GTG G + L K P + +D++ +AL +AK NA N + + + SD + + Sbjct: 65 ILDVGTGYGPLGLFAAKLWPKSRVTMIDVNERALALAKRNAQLNEI-DNVNIFSSDCYRN 123 Query: 161 V--EGLFDVIVSNPP 173 + + F +I++NPP Sbjct: 124 LDEQEQFGLILTNPP 138 >gi|300820746|ref|ZP_07100896.1| conserved hypothetical protein [Escherichia coli MS 119-7] gi|300526499|gb|EFK47568.1| conserved hypothetical protein [Escherichia coli MS 119-7] gi|323173107|gb|EFZ58738.1| hypothetical protein ECLT68_2521 [Escherichia coli LT-68] gi|324020033|gb|EGB89252.1| hypothetical protein HMPREF9542_01309 [Escherichia coli MS 117-3] Length = 219 Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust. Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 5/89 (5%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 V R LD+G G+G + L L + + + V++ +A A+ N + +ER + +D Sbjct: 19 VKRCLDIGAGSGLLALMLAQRTSDSVIIDAVELESEAAAQAQENINQSPWAERINVHTAD 78 Query: 157 ---WFSSVEGLFDVIVSNPPYIESVIVDC 182 W + FD+I+SNPPY + V+C Sbjct: 79 IQQWITQQTVRFDLIISNPPYYQQG-VEC 106 >gi|295108645|emb|CBL22598.1| Predicted O-methyltransferase [Ruminococcus obeum A2-162] Length = 250 Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust. Identities = 27/98 (27%), Positives = 46/98 (46%), Gaps = 6/98 (6%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 +D+ L I K + V LD+GTGTG + + L + G++I + ++A+ + Sbjct: 36 MDAVLLSGFANIRKNETV--LDMGTGTGIIPILLKSKGKGGHLTGLEIQEECADMARRSV 93 Query: 142 VTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPYI 175 N + D + D + FDV+ SNPPY+ Sbjct: 94 RYNSLESDIDIICGDIKEAAATFGAASFDVVTSNPPYM 131 >gi|242088363|ref|XP_002440014.1| hypothetical protein SORBIDRAFT_09g024440 [Sorghum bicolor] gi|241945299|gb|EES18444.1| hypothetical protein SORBIDRAFT_09g024440 [Sorghum bicolor] Length = 401 Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust. Identities = 30/86 (34%), Positives = 46/86 (53%), Gaps = 14/86 (16%) Query: 74 PRPE-TELLVDSALAFSL---PRIEK-----RDVV----RILDLGTGTGAVCLALLKESP 120 P PE T +++D LAF + P + R+V+ R+LD GTGTG + +A LK Sbjct: 203 PDPEATNIIIDPGLAFGMGEHPTTKLCLLFLREVIKGGERVLDYGTGTGVLGIAALKMG- 261 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGV 146 + G+DI +A+ A N + NG+ Sbjct: 262 ATQSTGIDIDPQAITSASENLLLNGL 287 >gi|330931014|ref|XP_003303237.1| hypothetical protein PTT_15368 [Pyrenophora teres f. teres 0-1] gi|311320884|gb|EFQ88665.1| hypothetical protein PTT_15368 [Pyrenophora teres f. teres 0-1] Length = 384 Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust. Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 14/91 (15%) Query: 96 RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN--------AVTNGVS 147 +D RILDLG GTG C+ + E P + +GVD+S + N + S Sbjct: 150 KDPKRILDLGCGTGIWCMDMADEYPSAEILGVDLSPIQPQFTPPNCKFEIDDVTLPWTYS 209 Query: 148 ERFDTLQSDWFSSVEGLFDVIVSNPPYIESV 178 + FD F ++ GL+ I S P E + Sbjct: 210 QHFD------FINIRGLYGSIGSWPTLYEQI 234 >gi|309803516|ref|ZP_07697609.1| methyltransferase small domain protein [Lactobacillus iners LactinV 11V1-d] gi|309808222|ref|ZP_07702131.1| methyltransferase small domain protein [Lactobacillus iners LactinV 01V1-a] gi|308164400|gb|EFO66654.1| methyltransferase small domain protein [Lactobacillus iners LactinV 11V1-d] gi|308168510|gb|EFO70619.1| methyltransferase small domain protein [Lactobacillus iners LactinV 01V1-a] Length = 204 Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust. Identities = 25/75 (33%), Positives = 43/75 (57%), Gaps = 3/75 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 ILD+GTG G + L K P + +D++ +AL +AK NA N + + + SD + + Sbjct: 65 ILDVGTGYGPLGLFAAKLWPKSRVTMIDVNERALALAKRNAQLNEI-DNVNIFSSDCYRN 123 Query: 161 V--EGLFDVIVSNPP 173 + + F +I++NPP Sbjct: 124 LDDQEQFGLILTNPP 138 >gi|284922525|emb|CBG35612.1| putative DNA-binding protein [Escherichia coli 042] Length = 245 Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust. Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 5/89 (5%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 V R LD+G G+G + L L + + + V++ +A A+ N + +ER + +D Sbjct: 45 VKRCLDIGAGSGLLALMLAQRTDDSVMIDAVELENEAAAQAQENINQSPWAERINVHTAD 104 Query: 157 ---WFSSVEGLFDVIVSNPPYIESVIVDC 182 W + FD+I+SNPPY + V+C Sbjct: 105 IQQWITQQTVRFDLIISNPPYYQQG-VEC 132 >gi|261825067|pdb|3JWJ|A Chain A, Crystal Structure Analysis Of The Methyltransferase Domain Of Bacterial-Avhen1-Cn gi|261825068|pdb|3JWJ|B Chain B, Crystal Structure Analysis Of The Methyltransferase Domain Of Bacterial-Avhen1-Cn Length = 202 Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust. Identities = 19/47 (40%), Positives = 32/47 (68%) Query: 93 IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKS 139 +++ + R++DLG G G + LLK+S F + GVD+S ++LEIA+ Sbjct: 15 LKQSNARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQE 61 >gi|94969003|ref|YP_591051.1| methyltransferase type 12 [Candidatus Koribacter versatilis Ellin345] gi|94551053|gb|ABF40977.1| Methyltransferase type 12 [Candidatus Koribacter versatilis Ellin345] Length = 465 Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust. Identities = 19/46 (41%), Positives = 31/46 (67%) Query: 92 RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137 ++++ R++DLG G G + ALLKE F + G+D+S ++LEIA Sbjct: 280 KLKEAGAQRVVDLGCGEGKLLRALLKEKQFKEIFGMDVSYRSLEIA 325 >gi|271498832|ref|YP_003331857.1| ribosomal protein L11 methyltransferase [Dickeya dadantii Ech586] gi|270342387|gb|ACZ75152.1| ribosomal protein L11 methyltransferase [Dickeya dadantii Ech586] Length = 295 Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust. Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 17/108 (15%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159 ++D G G+G + +A LK +G+DI +A++ ++ NA NGVSER + L D Sbjct: 162 VIDFGCGSGILAIAALKLG-AAHAIGIDIDPQAIQASRDNAQRNGVSERLELYLPKDQPK 220 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL---DGGIDGLS 204 + DV+V+N L +R+ P IS+ GG GLS Sbjct: 221 DLSA--DVVVAN----------ILAGPLRELAPLISVLPKAGGHLGLS 256 >gi|212715539|ref|ZP_03323667.1| hypothetical protein BIFCAT_00437 [Bifidobacterium catenulatum DSM 16992] gi|212660906|gb|EEB21481.1| hypothetical protein BIFCAT_00437 [Bifidobacterium catenulatum DSM 16992] Length = 247 Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust. Identities = 33/97 (34%), Positives = 47/97 (48%), Gaps = 4/97 (4%) Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 LDLG G G + L L SP +D++ +AL++ + NA NGV + S V Sbjct: 109 LDLGCGWGPIALTLGFASPKADIWALDVNERALDLTRRNAELNGVRNVRAVTADEIPSDV 168 Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG 198 FD+I SNPP V D L + + PR++ G Sbjct: 169 T--FDLIWSNPPI--RVGKDVLHELLMTWLPRLNAGG 201 >gi|218442218|ref|YP_002380547.1| methyltransferase type 11 [Cyanothece sp. PCC 7424] gi|218174946|gb|ACK73679.1| Methyltransferase type 11 [Cyanothece sp. PCC 7424] Length = 199 Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust. Identities = 24/83 (28%), Positives = 40/83 (48%), Gaps = 5/83 (6%) Query: 90 LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 L +E R +LDLG GTG + L + P +G G+D+S + L A+ N +R Sbjct: 37 LEYVELRSAANVLDLGCGTGRLLHRLATQFPHLRGTGLDLSKEMLRQARQR---NQYPKR 93 Query: 150 FDTLQ--SDWFSSVEGLFDVIVS 170 +Q ++ +G FD + + Sbjct: 94 LIYIQGNAESLPFAQGQFDAVFN 116 >gi|257870490|ref|ZP_05650143.1| rRNA small subunit methyltransferase C [Enterococcus gallinarum EG2] gi|257804654|gb|EEV33476.1| rRNA small subunit methyltransferase C [Enterococcus gallinarum EG2] Length = 200 Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust. Identities = 26/74 (35%), Positives = 45/74 (60%), Gaps = 3/74 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 ILD+G G G + L+L S + +DI+ +A+++A+ NA NG+ E D S+ + + Sbjct: 63 ILDVGCGYGPIGLSLAYASQRPVEM-IDINQRAVDLAQGNAKRNGI-ENADIHASNIYET 120 Query: 161 V-EGLFDVIVSNPP 173 + +G + I+SNPP Sbjct: 121 LHQGEYAAILSNPP 134 >gi|300021789|ref|YP_003754400.1| ribosomal L11 methyltransferase [Hyphomicrobium denitrificans ATCC 51888] gi|299523610|gb|ADJ22079.1| ribosomal L11 methyltransferase [Hyphomicrobium denitrificans ATCC 51888] Length = 291 Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust. Identities = 19/75 (25%), Positives = 41/75 (54%), Gaps = 4/75 (5%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LDLG G+G + +A+ K P + V D+ +++++A N NGV+ + ++ + Sbjct: 153 VLDLGCGSGVLAIAVAKSLPHARIVAADMDAQSVKVAAENVRINGVARQIKVTEASATTH 212 Query: 161 VE----GLFDVIVSN 171 + FD++++N Sbjct: 213 PDIRSRAPFDLLIAN 227 >gi|17231222|ref|NP_487770.1| hypothetical protein alr3730 [Nostoc sp. PCC 7120] gi|17132864|dbj|BAB75429.1| alr3730 [Nostoc sp. PCC 7120] Length = 460 Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust. Identities = 19/46 (41%), Positives = 32/46 (69%) Query: 93 IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAK 138 +++ + R++DLG G G + LLK+S F + GVD+S ++LEIA+ Sbjct: 276 LKQSNARRVIDLGCGQGNLLKMLLKDSFFEQITGVDVSYRSLEIAQ 321 >gi|312873656|ref|ZP_07733703.1| methyltransferase small domain protein [Lactobacillus iners LEAF 2052A-d] gi|325911620|ref|ZP_08174028.1| methyltransferase small domain protein [Lactobacillus iners UPII 143-D] gi|311090909|gb|EFQ49306.1| methyltransferase small domain protein [Lactobacillus iners LEAF 2052A-d] gi|325476606|gb|EGC79764.1| methyltransferase small domain protein [Lactobacillus iners UPII 143-D] Length = 204 Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust. Identities = 25/75 (33%), Positives = 43/75 (57%), Gaps = 3/75 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 ILD+GTG G + L K P + +D++ +AL +AK NA N + + + SD + + Sbjct: 65 ILDVGTGYGPLGLFAAKLWPKSRVTMIDVNERALALAKRNAQLNEI-DNVNIFSSDCYRN 123 Query: 161 V--EGLFDVIVSNPP 173 + + F +I++NPP Sbjct: 124 LDDQEQFGLILTNPP 138 >gi|260767868|ref|ZP_05876803.1| ribosomal RNA small subunit methyltransferase C [Vibrio furnissii CIP 102972] gi|260617377|gb|EEX42561.1| ribosomal RNA small subunit methyltransferase C [Vibrio furnissii CIP 102972] Length = 342 Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust. Identities = 30/110 (27%), Positives = 52/110 (47%), Gaps = 4/110 (3%) Query: 82 VDSALAFSLPRIEKRDVV-RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140 +D F LP + + ++DLG G G + + + + +P VD S A+E A+ N Sbjct: 179 LDQGTRFLLPHLPSDTTLNHVIDLGCGNGVLSVRMGQLNPQVNITCVDESFMAVESARQN 238 Query: 141 AVTNGVSER-FDTLQSDWFSSVEGLF-DVIVSNPPY-IESVIVDCLGLEV 187 VTN ER + ++ E D++V NPP+ + I D + ++ Sbjct: 239 LVTNLGQERNIACIANNCLDGFEAAHTDMVVCNPPFHQQQAITDHIAWQM 288 >gi|315169213|gb|EFU13230.1| type I restriction-modification system, M subunit [Enterococcus faecalis TX1341] gi|315171542|gb|EFU15559.1| type I restriction-modification system, M subunit [Enterococcus faecalis TX1342] Length = 529 Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust. Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 9/90 (10%) Query: 94 EKRDVVRILDLGTGTGAVCLALLKESPFFKGV---GVDISCKALEIAKSNAVTNGVSER- 149 E + + + D G+G++ L + + K V G +++ +AK N + +GV Sbjct: 215 EDKKLFSVFDPTMGSGSLMLNVRNYLNYPKSVKYHGQELNTTTFNLAKMNLILHGVEAED 274 Query: 150 -----FDTLQSDWFSSVEGLFDVIVSNPPY 174 DTL DW + FD +V NPPY Sbjct: 275 MNLRNGDTLNKDWPTDEPYTFDSVVMNPPY 304 >gi|315148961|gb|EFT92977.1| type I restriction-modification system, M subunit [Enterococcus faecalis TX4244] Length = 529 Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust. Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 9/90 (10%) Query: 94 EKRDVVRILDLGTGTGAVCLALLKESPFFKGV---GVDISCKALEIAKSNAVTNGVSER- 149 E + + + D G+G++ L + + K V G +++ +AK N + +GV Sbjct: 215 EDKKLFSVFDPTMGSGSLMLNVRNYLNYPKSVKYHGQELNTTTFNLAKMNLILHGVEAED 274 Query: 150 -----FDTLQSDWFSSVEGLFDVIVSNPPY 174 DTL DW + FD +V NPPY Sbjct: 275 MNLRNGDTLNKDWPTDEPYTFDSVVMNPPY 304 >gi|313898104|ref|ZP_07831643.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Clostridium sp. HGF2] gi|312957132|gb|EFR38761.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Clostridium sp. HGF2] Length = 444 Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust. Identities = 35/123 (28%), Positives = 64/123 (52%), Gaps = 17/123 (13%) Query: 60 FYNVRLTLSSDTF---EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116 ++++ ++SS +F PR +TE+L AL F+ ++ ++ V LDL G G + + L Sbjct: 260 IHDLKFSISSKSFYQVNPR-QTEILYGKALEFA--KLTGKETV--LDLYCGVGTISMFLA 314 Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF------DVIVS 170 + + G++I +A+ A+ NA NG++ + + SD + L DVIV Sbjct: 315 QRAKHV--TGIEIVPQAIRDARKNAALNGIAN-IEFVCSDAADYAKKLCEQGAHPDVIVV 371 Query: 171 NPP 173 +PP Sbjct: 372 DPP 374 >gi|309805440|ref|ZP_07699487.1| methyltransferase small domain protein [Lactobacillus iners LactinV 09V1-c] gi|312870886|ref|ZP_07730991.1| methyltransferase small domain protein [Lactobacillus iners LEAF 3008A-a] gi|329920991|ref|ZP_08277519.1| methyltransferase small domain protein [Lactobacillus iners SPIN 1401G] gi|308165258|gb|EFO67494.1| methyltransferase small domain protein [Lactobacillus iners LactinV 09V1-c] gi|311093576|gb|EFQ51915.1| methyltransferase small domain protein [Lactobacillus iners LEAF 3008A-a] gi|328935267|gb|EGG31747.1| methyltransferase small domain protein [Lactobacillus iners SPIN 1401G] Length = 204 Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust. Identities = 25/75 (33%), Positives = 43/75 (57%), Gaps = 3/75 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 ILD+GTG G + L K P + +D++ +AL +AK NA N + + + SD + + Sbjct: 65 ILDVGTGYGPLGLFAAKLWPKSRVTMIDVNERALALAKRNAQLNEI-DNVNIFSSDCYRN 123 Query: 161 V--EGLFDVIVSNPP 173 + + F +I++NPP Sbjct: 124 LDEQEQFGLILTNPP 138 >gi|157130292|ref|XP_001661874.1| prip interacting protein. pimt [Aedes aegypti] gi|108871934|gb|EAT36159.1| prip interacting protein. pimt [Aedes aegypti] Length = 526 Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust. Identities = 36/137 (26%), Positives = 67/137 (48%), Gaps = 11/137 (8%) Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPY-IESVIV 180 K + +DI K +E+AK NA GV++R + + ++ + L DVI +PP+ S + Sbjct: 391 KVIAIDIDPKKIEMAKHNAAVYGVADRIEFITGNFLQLADKLRADVIFLSPPWGGPSYLK 450 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG---LCSVEIGYNQKVDVVR 237 D EV D + + + + R ++ V+ +L ++ ++ G N V++ + Sbjct: 451 D----EVYDLETSLIPVPATELMRKARMVSRNVAMYLPRNSNTQQLTMLAGPNNAVEIEQ 506 Query: 238 IFESRKLFLVNAFKDYG 254 F RKL + A+ YG Sbjct: 507 NFLDRKLIALTAY--YG 521 >gi|293410991|ref|ZP_06654567.1| O-methyltransferase [Escherichia coli B354] gi|293415844|ref|ZP_06658487.1| O-methyltransferase [Escherichia coli B185] gi|301021939|ref|ZP_07185898.1| methyltransferase small domain protein [Escherichia coli MS 196-1] gi|331643199|ref|ZP_08344334.1| hypothetical protein ECHG_02469 [Escherichia coli H736] gi|291433492|gb|EFF06471.1| O-methyltransferase [Escherichia coli B185] gi|291471459|gb|EFF13943.1| O-methyltransferase [Escherichia coli B354] gi|299881406|gb|EFI89617.1| methyltransferase small domain protein [Escherichia coli MS 196-1] gi|331039997|gb|EGI12217.1| hypothetical protein ECHG_02469 [Escherichia coli H736] Length = 285 Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust. Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 4/84 (4%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 V R LD+G G+G + L L + + + V++ +A A+ N + +ER + +D Sbjct: 85 VKRCLDIGAGSGLLALMLAQRTDDSVMIDAVELESEAAAQAQENINQSPWAERINVHTAD 144 Query: 157 ---WFSSVEGLFDVIVSNPPYIES 177 W + FD+I+SNPPY + Sbjct: 145 IQQWITQQTVRFDLIISNPPYYQQ 168 >gi|91774271|ref|YP_566963.1| precorrin-8W decarboxylase [Methanococcoides burtonii DSM 6242] gi|91713286|gb|ABE53213.1| cobalt-precorrin-6Y C(15)-methyltransferase (decarboxylating) [Methanococcoides burtonii DSM 6242] Length = 183 Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust. Identities = 19/55 (34%), Positives = 35/55 (63%) Query: 86 LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140 +A SL +++ +D + D+G GTGAV + K + FK V +D +A+E++++N Sbjct: 17 IAISLSKLDLKDGITFYDVGCGTGAVSIEASKTARNFKVVAIDAREEAIEVSRTN 71 >gi|56551929|ref|YP_162768.1| Cyclopropane-fatty-acyl-phospholipid synthase [Zymomonas mobilis subsp. mobilis ZM4] gi|56543503|gb|AAV89657.1| Cyclopropane-fatty-acyl-phospholipid synthase [Zymomonas mobilis subsp. mobilis ZM4] Length = 415 Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust. Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 9/90 (10%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 RILD+G G G + L L + + +GV +S + L++A+ A G+ +R D + Sbjct: 178 RILDIGCGWGGMAL-FLGQIADVEVLGVTLSEEQLKVARKRAKEAGLDDRVKFQLID-YR 235 Query: 160 SVEGLFDVIVS-------NPPYIESVIVDC 182 V+G FD IVS PPY ++ C Sbjct: 236 EVKGRFDRIVSVGMFEHVGPPYYKNFFNHC 265 >gi|320580184|gb|EFW94407.1| Putative S-adenosylmethionine-dependent methyltransferase [Pichia angusta DL-1] Length = 225 Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust. Identities = 35/135 (25%), Positives = 60/135 (44%), Gaps = 23/135 (17%) Query: 52 HRILGWRDFYNVRLTLSSDTFEPRPE------------TELLVDSALAFSLPRIEKRDVV 99 H LG +++++ L + F P+ E +VD + P V Sbjct: 8 HSKLGTKEYWDNFYKLEKENFAENPDDTGECWFADSGAEEKIVDFVFSNLDPN------V 61 Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD-----TLQ 154 I DLGTG G + +L+E + VGVD S +++ AK+ A TN ++ F L+ Sbjct: 62 SICDLGTGNGHLLFEILQEGWKGQLVGVDYSEASVQFAKTIAKTNDLNVEFYQSDILNLE 121 Query: 155 SDWFSSVEGLFDVIV 169 + + G FD+++ Sbjct: 122 DQFLKTNAGNFDLVL 136 >gi|327188145|gb|EGE55365.1| putative methyltransferase protein [Rhizobium etli CNPAF512] Length = 259 Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust. Identities = 20/72 (27%), Positives = 38/72 (52%), Gaps = 1/72 (1%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWF 158 R+LD+G G G + +P + VGVD+S + LE+A+ + G+ F+ + + Sbjct: 31 RVLDIGCGAGQTTREAARAAPQGEAVGVDVSAEMLEVARQRSTAEGLRNVVFEQADAQFH 90 Query: 159 SSVEGLFDVIVS 170 + + FD+ +S Sbjct: 91 AFLPASFDLCIS 102 >gi|325912951|ref|ZP_08175325.1| methyltransferase small domain protein [Lactobacillus iners UPII 60-B] gi|325477765|gb|EGC80903.1| methyltransferase small domain protein [Lactobacillus iners UPII 60-B] Length = 204 Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust. Identities = 25/75 (33%), Positives = 43/75 (57%), Gaps = 3/75 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 ILD+GTG G + L K P + +D++ +AL +AK NA N + + + SD + + Sbjct: 65 ILDVGTGYGPLGLFAAKLWPKSRVTMIDVNERALALAKRNAQLNEI-DNVNIFSSDCYRN 123 Query: 161 V--EGLFDVIVSNPP 173 + + F +I++NPP Sbjct: 124 LDEQEQFGLILTNPP 138 >gi|300920743|ref|ZP_07137149.1| conserved hypothetical protein [Escherichia coli MS 115-1] gi|300412314|gb|EFJ95624.1| conserved hypothetical protein [Escherichia coli MS 115-1] Length = 219 Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust. Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 5/89 (5%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 V R LD+G G+G + L L + + + V++ +A A+ N + +ER + +D Sbjct: 19 VKRCLDIGAGSGLLALMLAQRTDDSVVIDAVELESEAAAQAQENINQSPWAERINVHTAD 78 Query: 157 ---WFSSVEGLFDVIVSNPPYIESVIVDC 182 W + FD+I+SNPPY + V+C Sbjct: 79 IQQWITQQTVRFDLIISNPPYYQQG-VEC 106 >gi|300725760|ref|ZP_07059230.1| methyltransferase small domain protein [Prevotella bryantii B14] gi|299776933|gb|EFI73473.1| methyltransferase small domain protein [Prevotella bryantii B14] Length = 247 Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust. Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 7/91 (7%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ---SDW 157 ILD+GTGTG + L L + P + ++I A+ AK N + ++R D+ Sbjct: 47 ILDIGTGTGVLSLMLAQRFPNAQIQAIEIDENAVLDAKDNFFASPFADRIKLEHIAFQDY 106 Query: 158 FSSVE---GLFDVIVSNPPYIESVIVDCLGL 185 V+ ++D +V NPPY + + +C L Sbjct: 107 IKEVKDTMPIYDSVVCNPPYFDKSL-ECNNL 136 >gi|257417159|ref|ZP_05594153.1| type I restriction modification system protein HsdMI [Enterococcus faecalis AR01/DG] gi|257158987|gb|EEU88947.1| type I restriction modification system protein HsdMI [Enterococcus faecalis ARO1/DG] Length = 529 Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust. Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 9/90 (10%) Query: 94 EKRDVVRILDLGTGTGAVCLALLKESPFFKGV---GVDISCKALEIAKSNAVTNGVSER- 149 E + + + D G+G++ L + + K V G +++ +AK N + +GV Sbjct: 215 EDKKLFSVFDPTMGSGSLMLNVRNYLNYPKSVKYHGQELNTTTFNLAKMNLILHGVEAED 274 Query: 150 -----FDTLQSDWFSSVEGLFDVIVSNPPY 174 DTL DW + FD +V NPPY Sbjct: 275 MNLRNGDTLNKDWPTDEPYTFDSVVMNPPY 304 >gi|257078398|ref|ZP_05572759.1| type I restriction modification system protein HsdMI [Enterococcus faecalis JH1] gi|294780143|ref|ZP_06745515.1| type I restriction-modification system, M subunit [Enterococcus faecalis PC1.1] gi|256986428|gb|EEU73730.1| type I restriction modification system protein HsdMI [Enterococcus faecalis JH1] gi|294452686|gb|EFG21116.1| type I restriction-modification system, M subunit [Enterococcus faecalis PC1.1] Length = 529 Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust. Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 9/90 (10%) Query: 94 EKRDVVRILDLGTGTGAVCLALLKESPFFKGV---GVDISCKALEIAKSNAVTNGVSER- 149 E + + + D G+G++ L + + K V G +++ +AK N + +GV Sbjct: 215 EDKKLFSVFDPTMGSGSLMLNVRNYLNYPKSVKYHGQELNTTTFNLAKMNLILHGVEAED 274 Query: 150 -----FDTLQSDWFSSVEGLFDVIVSNPPY 174 DTL DW + FD +V NPPY Sbjct: 275 MNLRNGDTLNKDWPTDEPYTFDSVVMNPPY 304 >gi|256960372|ref|ZP_05564543.1| type I restriction modification system protein HsdMI [Enterococcus faecalis Merz96] gi|293384345|ref|ZP_06630230.1| type I restriction-modification system, M subunit [Enterococcus faecalis R712] gi|293388418|ref|ZP_06632926.1| type I restriction-modification system, M subunit [Enterococcus faecalis S613] gi|312908546|ref|ZP_07767490.1| type I restriction-modification system, M subunit [Enterococcus faecalis DAPTO 512] gi|312908984|ref|ZP_07767846.1| type I restriction-modification system, M subunit [Enterococcus faecalis DAPTO 516] gi|256950868|gb|EEU67500.1| type I restriction modification system protein HsdMI [Enterococcus faecalis Merz96] gi|291078337|gb|EFE15701.1| type I restriction-modification system, M subunit [Enterococcus faecalis R712] gi|291082193|gb|EFE19156.1| type I restriction-modification system, M subunit [Enterococcus faecalis S613] gi|310625513|gb|EFQ08796.1| type I restriction-modification system, M subunit [Enterococcus faecalis DAPTO 512] gi|311290684|gb|EFQ69240.1| type I restriction-modification system, M subunit [Enterococcus faecalis DAPTO 516] gi|315149120|gb|EFT93136.1| type I restriction-modification system, M subunit [Enterococcus faecalis TX0012] Length = 529 Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust. Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 9/90 (10%) Query: 94 EKRDVVRILDLGTGTGAVCLALLKESPFFKGV---GVDISCKALEIAKSNAVTNGVSER- 149 E + + + D G+G++ L + + K V G +++ +AK N + +GV Sbjct: 215 EDKKLFSVFDPTMGSGSLMLNVRNYLNYPKSVKYHGQELNTTTFNLAKMNLILHGVEAED 274 Query: 150 -----FDTLQSDWFSSVEGLFDVIVSNPPY 174 DTL DW + FD +V NPPY Sbjct: 275 MNLRNGDTLNKDWPTDEPYTFDSVVMNPPY 304 >gi|167760309|ref|ZP_02432436.1| hypothetical protein CLOSCI_02682 [Clostridium scindens ATCC 35704] gi|167662192|gb|EDS06322.1| hypothetical protein CLOSCI_02682 [Clostridium scindens ATCC 35704] Length = 246 Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust. Identities = 27/98 (27%), Positives = 53/98 (54%), Gaps = 6/98 (6%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 +D+ L S ++K + LDLG+GTG + + L ++ G++I ++ ++A+ + Sbjct: 32 MDAILLSSFATVKKNETA--LDLGSGTGILPILLEAKNEGAHYTGLEIQEESADMARRSV 89 Query: 142 VTNGVSERFDTLQSD--WFSSVEGL--FDVIVSNPPYI 175 N + ++ D + D S++ G F VI +NPPY+ Sbjct: 90 RHNHLQDKVDIITGDIKEASAIFGAASFHVITTNPPYM 127 >gi|301155360|emb|CBW14826.1| predicted S-adenosyl-L-methionine-dependent methyltransferase [Haemophilus parainfluenzae T3T1] Length = 215 Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust. Identities = 28/82 (34%), Positives = 39/82 (47%), Gaps = 4/82 (4%) Query: 97 DVVRILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155 D ILD+GTGTG V L L + S K V++ A + A+ N + R + Sbjct: 18 DCQHILDMGTGTGLVALMLAQRSHEHCKIEAVELDPLAAQQAQENFKASPWHNRLHLTRQ 77 Query: 156 D---WFSSVEGLFDVIVSNPPY 174 D + FD+IV+NPPY Sbjct: 78 DVQTYCLQTAHQFDLIVANPPY 99 >gi|298292265|ref|YP_003694204.1| Cyclopropane-fatty-acyl-phospholipid synthase [Starkeya novella DSM 506] gi|296928776|gb|ADH89585.1| Cyclopropane-fatty-acyl-phospholipid synthase [Starkeya novella DSM 506] Length = 405 Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust. Identities = 38/160 (23%), Positives = 73/160 (45%), Gaps = 9/160 (5%) Query: 16 GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL---TLSSDTF 72 GL+SH V +R+ +N + R+ + H +FY + L + S + Sbjct: 89 GLASHPVQQALRRGWRALRRWHQSNPLKRAASNAQSHYDHP-PEFYALWLDSRMIYSCAY 147 Query: 73 EPRPETEL--LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130 P PET L ++ L +++ +R+ ++G+G GA+ + L K ++++ Sbjct: 148 FPTPETSLEDAQEAKLRHIAAKLKLEPGMRVAEIGSGWGALAIYLAKLG--VHVTAINVA 205 Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170 + L +K A GV++R + D + + G FD +VS Sbjct: 206 TEQLAESKKRAQAAGVADRITFFERD-YRELTGTFDRVVS 244 >gi|229547563|ref|ZP_04436288.1| possible site-specific DNA-methyltransferase (adenine-specific) [Enterococcus faecalis TX1322] gi|229307336|gb|EEN73323.1| possible site-specific DNA-methyltransferase (adenine-specific) [Enterococcus faecalis TX1322] Length = 529 Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust. Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 9/90 (10%) Query: 94 EKRDVVRILDLGTGTGAVCLALLKESPFFKGV---GVDISCKALEIAKSNAVTNGVSER- 149 E + + + D G+G++ L + + K V G +++ +AK N + +GV Sbjct: 215 EDKKLFSVFDPTMGSGSLMLNVRNYLNYPKSVKYHGQELNTTTFNLAKMNLILHGVEAED 274 Query: 150 -----FDTLQSDWFSSVEGLFDVIVSNPPY 174 DTL DW + FD +V NPPY Sbjct: 275 MNLRNGDTLNKDWPTDEPYTFDSVVMNPPY 304 >gi|227517373|ref|ZP_03947422.1| possible site-specific DNA-methyltransferase (adenine-specific) [Enterococcus faecalis TX0104] gi|227075243|gb|EEI13206.1| possible site-specific DNA-methyltransferase (adenine-specific) [Enterococcus faecalis TX0104] Length = 529 Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust. Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 9/90 (10%) Query: 94 EKRDVVRILDLGTGTGAVCLALLKESPFFKGV---GVDISCKALEIAKSNAVTNGVSER- 149 E + + + D G+G++ L + + K V G +++ +AK N + +GV Sbjct: 215 EDKKLFSVFDPTMGSGSLMLNVRNYLNYPKSVKYHGQELNTTTFNLAKMNLILHGVEAED 274 Query: 150 -----FDTLQSDWFSSVEGLFDVIVSNPPY 174 DTL DW + FD +V NPPY Sbjct: 275 MNLRNGDTLNKDWPTDEPYTFDSVVMNPPY 304 >gi|218288634|ref|ZP_03492911.1| ribosomal protein L11 methyltransferase [Alicyclobacillus acidocaldarius LAA1] gi|218241291|gb|EED08466.1| ribosomal protein L11 methyltransferase [Alicyclobacillus acidocaldarius LAA1] Length = 316 Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust. Identities = 26/80 (32%), Positives = 44/80 (55%), Gaps = 7/80 (8%) Query: 96 RDVVRILDLGTGTG--AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153 R +R++D+GTGTG A+ AL+ + V +D+ A+ A N NG+ +R D Sbjct: 176 RPGMRVVDVGTGTGVLAIAAALVGAE---RVVAIDLDPVAVSAATDNVRKNGLEDRVDVR 232 Query: 154 QSDWFSSV--EGLFDVIVSN 171 Q D +++ + FD+ V+N Sbjct: 233 QGDLLAALRPDETFDLAVAN 252 >gi|20806632|ref|NP_621803.1| SAM-dependent methyltransferase [Thermoanaerobacter tengcongensis MB4] gi|20515079|gb|AAM23407.1| SAM-dependent methyltransferases [Thermoanaerobacter tengcongensis MB4] Length = 251 Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust. Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 6/81 (7%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 RI+DLG G G + + + ++ GV+I + +++A + N + R + D Sbjct: 48 RIVDLGCGNGIIPILIAAKTKDTFIYGVEIQEEMVDMAIRSVAINSLENRIKIIHGD-VR 106 Query: 160 SVEGL-----FDVIVSNPPYI 175 VE L FDV+ SNPPY+ Sbjct: 107 EVEKLLGYEKFDVVTSNPPYM 127 >gi|319891505|ref|YP_004148380.1| Ribosomal RNA small subunit methyltransferase C [Staphylococcus pseudintermedius HKU10-03] gi|317161201|gb|ADV04744.1| Ribosomal RNA small subunit methyltransferase C [Staphylococcus pseudintermedius HKU10-03] gi|323465323|gb|ADX77476.1| conserved hypothetical protein [Staphylococcus pseudintermedius ED99] Length = 202 Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust. Identities = 41/156 (26%), Positives = 66/156 (42%), Gaps = 22/156 (14%) Query: 19 SHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPET 78 SH PD+ D+++ I + + +H F ++ SD Sbjct: 2 SHYYDAHPDAATDEKE-------ITYAYQQHQLHLTTDAGVFSRDQVDFGSD-------- 46 Query: 79 ELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAK 138 LLV + L P +K I+D+G G G + L L K +P +D++ +AL +A+ Sbjct: 47 -LLVHTFLNAHPPGQKKT----IVDVGCGYGPIGLMLAKVAPHDHITMLDVNHRALGLAE 101 Query: 139 SNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPP 173 NA N +S +SD S V +V+NPP Sbjct: 102 KNAQRNQLS-NVTIQESDGLSQVANETQHYVVTNPP 136 >gi|315605276|ref|ZP_07880322.1| transferase [Actinomyces sp. oral taxon 180 str. F0310] gi|315313093|gb|EFU61164.1| transferase [Actinomyces sp. oral taxon 180 str. F0310] Length = 562 Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust. Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 5/82 (6%) Query: 95 KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154 + V LD+G G G L L + + V D+S +A + + NA N + D + Sbjct: 215 RESVESALDVGCGCGIQALYLATHA--SRVVATDLSARACALTQFNAALNEAT--IDVRE 270 Query: 155 SDWFSSVEG-LFDVIVSNPPYI 175 F VEG FD+IV+NPP++ Sbjct: 271 GSLFEPVEGETFDLIVTNPPFV 292 >gi|256783262|ref|ZP_05521693.1| hypothetical protein SlivT_02090 [Streptomyces lividans TK24] gi|289767135|ref|ZP_06526513.1| conserved hypothetical protein [Streptomyces lividans TK24] gi|289697334|gb|EFD64763.1| conserved hypothetical protein [Streptomyces lividans TK24] Length = 245 Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust. Identities = 29/86 (33%), Positives = 42/86 (48%), Gaps = 7/86 (8%) Query: 86 LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145 LA ++P D R+LDLG G L L P GVD+S AL+ A+ A G Sbjct: 29 LAHAVPG----DGARVLDLGCGGAEWLLRALTGHPRLTAEGVDVSASALDHARGAAARLG 84 Query: 146 VSERFDTLQSDW--FSSVEGLFDVIV 169 V++R D F++ G FD+++ Sbjct: 85 VADRLTLHHEDAARFAAPHG-FDLVL 109 >gi|114705922|ref|ZP_01438825.1| ribosomal protein L11 methyltransferase [Fulvimarina pelagi HTCC2506] gi|114538768|gb|EAU41889.1| ribosomal protein L11 methyltransferase [Fulvimarina pelagi HTCC2506] Length = 288 Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust. Identities = 30/85 (35%), Positives = 43/85 (50%), Gaps = 9/85 (10%) Query: 93 IEKRDVVRILDLGTGTG--AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150 I ++ +LDLGTG+ A+ A L P DI A+++A+ NA NGVS Sbjct: 144 IRRKRPKAVLDLGTGSAVLAIGAAKLGRLPVL---ATDIDPVAVDVARQNAGANGVSRLV 200 Query: 151 DTLQSDWFSSVE----GLFDVIVSN 171 D + F S + G FD+IV+N Sbjct: 201 DVAIATGFRSPKIRERGPFDLIVAN 225 >gi|332708898|ref|ZP_08428869.1| methylase involved in ubiquinone/menaquinone biosynthesis [Lyngbya majuscula 3L] gi|332352440|gb|EGJ32009.1| methylase involved in ubiquinone/menaquinone biosynthesis [Lyngbya majuscula 3L] Length = 344 Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust. Identities = 30/102 (29%), Positives = 47/102 (46%), Gaps = 14/102 (13%) Query: 97 DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE------IAKSNAVTNGVSERF 150 +V +LD+G G+GA C AL + P I C LE IAK +G+S+R Sbjct: 175 NVKHLLDVGGGSGAFCFALAQRYP-------QIHCTILELPTICKIAKEYIAESGLSDRV 227 Query: 151 DTLQSDWFS-SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFD 191 DT D+F +D ++ + + + CL L + F+ Sbjct: 228 DTCVGDFFKDPFPAGYDAVLFSNIFHDWGWEKCLYLAKQSFE 269 >gi|254479291|ref|ZP_05092632.1| Methyltransferase small domain superfamily protein [Carboxydibrachium pacificum DSM 12653] gi|214034766|gb|EEB75499.1| Methyltransferase small domain superfamily protein [Carboxydibrachium pacificum DSM 12653] Length = 241 Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust. Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 6/81 (7%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 RI+DLG G G + + + ++ GV+I + +++A + N + R + D Sbjct: 38 RIVDLGCGNGIIPILIAAKTKDTFIYGVEIQEEMVDMAIRSVAINSLENRIKIIHGD-VR 96 Query: 160 SVEGL-----FDVIVSNPPYI 175 VE L FDV+ SNPPY+ Sbjct: 97 EVEKLLGYEKFDVVTSNPPYM 117 >gi|118587631|ref|ZP_01545041.1| ribosomal RNA small subunit methyltransferase C [Stappia aggregata IAM 12614] gi|118439253|gb|EAV45884.1| ribosomal RNA small subunit methyltransferase C [Stappia aggregata IAM 12614] Length = 352 Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust. Identities = 30/107 (28%), Positives = 51/107 (47%), Gaps = 9/107 (8%) Query: 76 PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV-DISCKAL 134 P + LL D LP K R DLG G G + A+ +++P + + + +AL Sbjct: 185 PASRLLADQ-----LPATLKG---RGADLGAGFGYLTRAVFEKAPKVTSMDLFEAEKRAL 236 Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181 ++A+ N + + SD +EG +D +VSNPP+ ++ D Sbjct: 237 DLAEQNLAAFKGLRTMNGIWSDVTQGIEGPYDFVVSNPPFHQAGKAD 283 >gi|317502782|ref|ZP_07960888.1| ribosomal protein L11 methyltransferase [Prevotella salivae DSM 15606] gi|315666093|gb|EFV05654.1| ribosomal protein L11 methyltransferase [Prevotella salivae DSM 15606] Length = 305 Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust. Identities = 35/114 (30%), Positives = 54/114 (47%), Gaps = 13/114 (11%) Query: 60 FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119 F + +L + E T ++V + L F L R+LD G GTG + + LK Sbjct: 140 FIDAKLAFGTGNHET---TRMIVSTLLHFDLTD------KRVLDCGCGTGILGIVALKYG 190 Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW--FSSVEGLFDVIVSN 171 VG DI ++E AK NA N V E + Q D + + G+FD++++N Sbjct: 191 A-KSVVGYDIDEWSVENAKHNAEINNV-ENIEIYQGDANVLNHISGVFDIVLAN 242 >gi|302553085|ref|ZP_07305427.1| rRNA or tRNA methyltransferase [Streptomyces viridochromogenes DSM 40736] gi|302470703|gb|EFL33796.1| rRNA or tRNA methyltransferase [Streptomyces viridochromogenes DSM 40736] Length = 512 Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust. Identities = 39/132 (29%), Positives = 56/132 (42%), Gaps = 16/132 (12%) Query: 95 KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154 +R V LDLGTG+G L + + + D++ +AL I +G S D + Sbjct: 169 RRPVAAALDLGTGSGVQALHAARHA--TRVTATDLNPRALHITALTLALSG-SPAADLRE 225 Query: 155 SDWFSSV--EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212 F V + +D+IVSNPP+ VI L R DGG+ G RT+ Sbjct: 226 GSLFDPVRDDETYDLIVSNPPF---VISPGARLTYR--------DGGMGGDDLCRTLVSE 274 Query: 213 VSRHLNKDGLCS 224 LN+ G Sbjct: 275 AGERLNEGGFAQ 286 >gi|256854686|ref|ZP_05560050.1| type I restriction modification system protein HsdMI [Enterococcus faecalis T8] gi|256710246|gb|EEU25290.1| type I restriction modification system protein HsdMI [Enterococcus faecalis T8] gi|315030629|gb|EFT42561.1| type I restriction-modification system, M subunit [Enterococcus faecalis TX4000] Length = 529 Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust. Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 9/90 (10%) Query: 94 EKRDVVRILDLGTGTGAVCLALLKESPFFKGV---GVDISCKALEIAKSNAVTNGVSER- 149 E + + + D G+G++ L + + K V G +++ +AK N + +GV Sbjct: 215 EDKKLFSVFDPTMGSGSLMLNVRNYLNYPKSVKYHGQELNTTTFNLAKMNLILHGVEAED 274 Query: 150 -----FDTLQSDWFSSVEGLFDVIVSNPPY 174 DTL DW + FD +V NPPY Sbjct: 275 MNLRNGDTLNKDWPTDEPYTFDSVVMNPPY 304 >gi|254555737|ref|YP_003062154.1| 16S RNA methylase [Lactobacillus plantarum JDM1] gi|254044664|gb|ACT61457.1| 16S RNA methylase [Lactobacillus plantarum JDM1] Length = 202 Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust. Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 2/74 (2%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LDLGTG G + +AL +SP VD++ AL +A+ N N ++ + D + Sbjct: 63 MLDLGTGYGPIGMALAYQSPERTVDMVDVNELALSLARKNVALNQITNT-NIFTFDVYQQ 121 Query: 161 VEGL-FDVIVSNPP 173 V + IV+NPP Sbjct: 122 VTATNYAAIVTNPP 135 >gi|254502058|ref|ZP_05114209.1| Methyltransferase domain family [Labrenzia alexandrii DFL-11] gi|222438129|gb|EEE44808.1| Methyltransferase domain family [Labrenzia alexandrii DFL-11] Length = 207 Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust. Identities = 21/56 (37%), Positives = 33/56 (58%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 +L+LG GTG +A K P + G+DIS + LE A++N G+S+R ++ D Sbjct: 38 VLELGCGTGRNLIAAAKRYPKARFYGLDISEQMLETARANIEKAGLSDRIILVRGD 93 >gi|153826532|ref|ZP_01979199.1| conserved hypothetical protein [Vibrio cholerae MZO-2] gi|149739712|gb|EDM53919.1| conserved hypothetical protein [Vibrio cholerae MZO-2] Length = 240 Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust. Identities = 25/80 (31%), Positives = 36/80 (45%), Gaps = 5/80 (6%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD---W 157 ILD+G GTG + L + P +DI A A+ N + +ER + +D W Sbjct: 46 ILDIGCGTGLLSLMCAQRFPHAHITALDIEQTAYLAAEHNRQQSPWAERIECQHADILHW 105 Query: 158 FSSVEGLFDVIVSNPPYIES 177 + F I+ NPPY S Sbjct: 106 --QLSKRFAAIICNPPYFNS 123 >gi|124512804|ref|XP_001349758.1| methyl transferase-like protein, putative [Plasmodium falciparum 3D7] gi|23615175|emb|CAD52165.1| methyl transferase-like protein, putative [Plasmodium falciparum 3D7] Length = 222 Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust. Identities = 30/116 (25%), Positives = 62/116 (53%), Gaps = 10/116 (8%) Query: 67 LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL-----KESPF 121 + +D + P +T V+ AL + +I +D+ +L++G+G+G + L+L + Sbjct: 20 IRNDVYLPSSDTFTFVE-ALEEEVDKIS-QDINIVLEMGSGSGYIILSLYEMLLSRNKKI 77 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYI 175 VDI+ KA E K+ N + + ++++ F+++ LFD+++ NPPY+ Sbjct: 78 DMLYCVDINKKACECIKNLTYENKIF-NVEIIRNNLFNNIRRCELFDIVLFNPPYV 132 >gi|322795182|gb|EFZ18004.1| hypothetical protein SINV_01677 [Solenopsis invicta] Length = 215 Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust. Identities = 31/117 (26%), Positives = 57/117 (48%), Gaps = 23/117 (19%) Query: 71 TFEPRPETELLVDS------ALAFSLPRIEKRDVVRILDLGTGTG----AVCLALLKESP 120 +EP ++ LL+D+ L PRI L++G+G+G A+ +AL K + Sbjct: 16 VYEPSEDSYLLIDTLEADLNILHAMKPRI-------CLEIGSGSGIVITALAMALKKHNV 68 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYI 175 F + +DI+ A + ++ N V D +Q + ++ FD+++ NPPY+ Sbjct: 69 HF--IAIDINPDACRATRRTSLLNSVD--VDVVQMNLLDCIQAERTFDIVLFNPPYV 121 >gi|225558081|gb|EEH06366.1| methyltransferase [Ajellomyces capsulatus G186AR] gi|325095806|gb|EGC49116.1| methyltransferase [Ajellomyces capsulatus H88] Length = 343 Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust. Identities = 25/69 (36%), Positives = 35/69 (50%), Gaps = 5/69 (7%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R LDLGTGTG L E P + +GVD+S + V+ V D ++++W Sbjct: 110 RALDLGTGTGLWALDFGDEFPSSQAIGVDLSP-----IQPTWVSPNVKFYVDDIETEWGY 164 Query: 160 SVEGLFDVI 168 S E FD+I Sbjct: 165 SREEAFDII 173 >gi|118465195|ref|YP_879415.1| thiopurine S-methyltransferase (tpmt) superfamily protein [Mycobacterium avium 104] gi|118166482|gb|ABK67379.1| thiopurine S-methyltransferase (tpmt) superfamily protein [Mycobacterium avium 104] Length = 231 Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust. Identities = 48/196 (24%), Positives = 83/196 (42%), Gaps = 30/196 (15%) Query: 73 EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCK 132 EP+PE L+++ +LD G G AV L L + F VG+D S Sbjct: 34 EPQPEIAALIEAGKFHG----------DVLDAGCGEAAVSLYLAERG--FTTVGLDQSPT 81 Query: 133 ALEIAKSNAVTNGV-SERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFD 191 A+++A+ A G+ S F+ F+ +G F IV +S + + +E+R+ Sbjct: 82 AIKLAREKAARRGLTSASFEVADISDFTGYDGRFGTIV------DSTLFHSMPVELREGY 135 Query: 192 PRISLDGGIDGLSHYRTI-------ADGVSRHLNKDGLCSVEIGYNQKVDVV---RIFES 241 R + G S++ + A+G + +D L V +G +D + RI + Sbjct: 136 QRSIVQAAAPGASYFVLVFDRNAMPAEGPVNAVTEDELREV-VGKYWVIDEIRPARIHAN 194 Query: 242 RKLFLVNAFKDYGGND 257 + AF+ + G D Sbjct: 195 VPENFLAAFEAFAGAD 210 >gi|26248940|ref|NP_754980.1| hypothetical protein c3099 [Escherichia coli CFT073] gi|91211902|ref|YP_541888.1| hypothetical protein UTI89_C2897 [Escherichia coli UTI89] gi|117624796|ref|YP_853709.1| hypothetical protein APECO1_3956 [Escherichia coli APEC O1] gi|237705085|ref|ZP_04535566.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA] gi|331648322|ref|ZP_08349411.1| hypothetical protein ECIG_05212 [Escherichia coli M605] gi|26109346|gb|AAN81548.1|AE016764_230 Hypothetical protein yfiC [Escherichia coli CFT073] gi|91073476|gb|ABE08357.1| hypothetical protein YfiC [Escherichia coli UTI89] gi|115513920|gb|ABJ01995.1| conserved hypothetical protein [Escherichia coli APEC O1] gi|226901451|gb|EEH87710.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA] gi|331042871|gb|EGI15012.1| hypothetical protein ECIG_05212 [Escherichia coli M605] Length = 285 Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust. Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 4/84 (4%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 V R LD+G G+G + L L + + + V++ +A A+ N + +ER + +D Sbjct: 85 VKRCLDIGAGSGLLALMLAQRTDDSVMIDAVELESEAAAQAQENINQSPWAERINVHTAD 144 Query: 157 ---WFSSVEGLFDVIVSNPPYIES 177 W + FD+I+SNPPY + Sbjct: 145 ILQWITQQTVRFDLIISNPPYYQQ 168 >gi|262282766|ref|ZP_06060534.1| RsmD family RNA methyltransferase [Streptococcus sp. 2_1_36FAA] gi|262262057|gb|EEY80755.1| RsmD family RNA methyltransferase [Streptococcus sp. 2_1_36FAA] Length = 179 Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust. Identities = 35/131 (26%), Positives = 59/131 (45%), Gaps = 16/131 (12%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+LDL G+G++ + + + V V+ +A I N S RFD L+ + Sbjct: 44 RVLDLYAGSGSLAIEAISRG-MEEAVLVEKDRRAQVIISENIQMTKESTRFDLLKMESGR 102 Query: 160 SVE---GLFDVIVSNPPYI-ESVIVDCLGLEVRDF-----------DPRISLDGGIDGLS 204 ++E G FD+++ +PPY E ++ D LE R D + L I GL Sbjct: 103 ALEILTGTFDLVLLDPPYAKEQIVADLEKLEERQLLSQDVLVVCETDKEVELPEEIAGLG 162 Query: 205 HYRTIADGVSR 215 ++ G+S+ Sbjct: 163 IWKQKIYGISK 173 >gi|262163962|ref|ZP_06031701.1| 16S RNA G1207 methylase RsmC [Vibrio mimicus VM223] gi|262027490|gb|EEY46156.1| 16S RNA G1207 methylase RsmC [Vibrio mimicus VM223] Length = 340 Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust. Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 2/75 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 +++D+G G G + + K +P + DIS A+ ++ + N + R SD FS Sbjct: 203 KVIDIGCGAGVLGCVMAKLNPNIELEMTDISALAIRSSQETLLANHL--RGTVYPSDMFS 260 Query: 160 SVEGLFDVIVSNPPY 174 + +D IV+NPP+ Sbjct: 261 DTKHKYDYIVTNPPF 275 >gi|260912576|ref|ZP_05919108.1| TrmA family RNA methyltransferase [Prevotella sp. oral taxon 472 str. F0295] gi|260633341|gb|EEX51499.1| TrmA family RNA methyltransferase [Prevotella sp. oral taxon 472 str. F0295] Length = 502 Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust. Identities = 31/113 (27%), Positives = 56/113 (49%), Gaps = 13/113 (11%) Query: 72 FEPRPETELLVDSALAFSLPRIEKR-----DVVRILDLGTGTGAVCLALLKESPFFKGVG 126 F+ P++ ++ A+ L + +R + DL TGTG + + +++ K VG Sbjct: 324 FKVGPKSFYQTNTQQAYHLYDVARRFASLSGTETVYDLYTGTGTIANFVARQAK--KVVG 381 Query: 127 VDISCKALEIAKSNAVTNGVSER------FDTLQSDWFSSVEGLFDVIVSNPP 173 V+ +A+E AK N+ NG+S + +D F + G DVI+++PP Sbjct: 382 VEYVPEAIEDAKVNSELNGISNTTFYAGDMKDILNDEFIANNGQPDVIITDPP 434 >gi|159038496|ref|YP_001537749.1| methyltransferase type 12 [Salinispora arenicola CNS-205] gi|157917331|gb|ABV98758.1| Methyltransferase type 12 [Salinispora arenicola CNS-205] Length = 246 Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust. Identities = 35/132 (26%), Positives = 59/132 (44%), Gaps = 8/132 (6%) Query: 96 RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155 +D R L+ G G G A+ +P + VGVD+S K LE+A+ + R + Sbjct: 61 QDAGRTLEFGCGPGVYLEAVATHTPVPEIVGVDVSAKTLEVARRRVNDD---SRLRLVNG 117 Query: 156 DWFSSVE-GLFDVIV-SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI---A 210 D+++ +E G DV++ +N + + D + + P L G + + HY Sbjct: 118 DFWADLELGKADVVICANAIHHLGRVRDVIERLMSFVRPGGVLIGNVWTMDHYHEYQRNV 177 Query: 211 DGVSRHLNKDGL 222 G RHL + L Sbjct: 178 HGEMRHLGRSAL 189 >gi|157158975|ref|YP_001463899.1| putative methyltransferase [Escherichia coli E24377A] gi|191167988|ref|ZP_03029790.1| putative methyltransferase [Escherichia coli B7A] gi|218696203|ref|YP_002403870.1| putative S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli 55989] gi|262828192|sp|A7ZQ20|TRMN6_ECO24 RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName: Full=tRNA m6A37 methyltransferase gi|262828216|sp|B7LDG8|TRMN6_ECO55 RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName: Full=tRNA m6A37 methyltransferase gi|157081005|gb|ABV20713.1| putative methyltransferase [Escherichia coli E24377A] gi|190901995|gb|EDV61742.1| putative methyltransferase [Escherichia coli B7A] gi|218352935|emb|CAU98734.1| putative S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli 55989] gi|323944575|gb|EGB40644.1| methyltransferase small [Escherichia coli H120] gi|324118215|gb|EGC12111.1| methyltransferase small [Escherichia coli E1167] Length = 245 Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust. Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 5/89 (5%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 V R LD+G G+G + L L + + + V++ +A A+ N + +ER + +D Sbjct: 45 VKRCLDIGAGSGLLALMLAQRTDDSVIIDAVELESEAAAQAQENINQSPWAERINVHTAD 104 Query: 157 ---WFSSVEGLFDVIVSNPPYIESVIVDC 182 W + FD+I+SNPPY + V+C Sbjct: 105 IQQWITQQTVRFDLIISNPPYYQQG-VEC 132 >gi|332991616|gb|AEF01671.1| putative RNA methyltransferase [Alteromonas sp. SN2] Length = 258 Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust. Identities = 29/83 (34%), Positives = 41/83 (49%), Gaps = 4/83 (4%) Query: 99 VRILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 ILD+GTGTG + L + ++S K +DI A A +N + + +Q Sbjct: 55 AHILDIGTGTGILALMMAQQSLASAKITAIDIDEGAALQASANVGASPWPTKI-VVQHTK 113 Query: 158 FSSV--EGLFDVIVSNPPYIESV 178 S + + FD IVSNPPY E V Sbjct: 114 LSDLVADNTFDFIVSNPPYFEQV 136 >gi|156972541|ref|YP_001443448.1| ribosomal protein L11 methyltransferase [Vibrio harveyi ATCC BAA-1116] gi|166223500|sp|A7MXI3|PRMA_VIBHB RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11 Mtase gi|156524135|gb|ABU69221.1| hypothetical protein VIBHAR_00173 [Vibrio harveyi ATCC BAA-1116] Length = 295 Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust. Identities = 33/112 (29%), Positives = 57/112 (50%), Gaps = 17/112 (15%) Query: 74 PRPET-ELLVDSALAFS----------LPRIEKRDVV--RILDLGTGTGAVCLALLKESP 120 P P+ +++D LAF L +E D+ ++D G G+G + +A +K Sbjct: 123 PEPDAVNVMLDPGLAFGTGTHPTTALCLEWLESLDLSGKTVIDFGCGSGILAIAAIKLG- 181 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF-DVIVSN 171 K +G+DI +AL+ ++ NA NGV+ + + + EGL DV+V+N Sbjct: 182 AEKVIGIDIDPQALQASRDNAERNGVANQLEVFLPQ--NQPEGLIADVVVAN 231 >gi|154280649|ref|XP_001541137.1| predicted protein [Ajellomyces capsulatus NAm1] gi|150411316|gb|EDN06704.1| predicted protein [Ajellomyces capsulatus NAm1] Length = 343 Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust. Identities = 25/69 (36%), Positives = 35/69 (50%), Gaps = 5/69 (7%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R LDLGTGTG L E P + +GVD+S + V+ V D ++++W Sbjct: 110 RALDLGTGTGLWALDFGDEFPSSQAIGVDLSP-----IQPTWVSPNVKFYVDDIETEWGY 164 Query: 160 SVEGLFDVI 168 S E FD+I Sbjct: 165 SREEAFDII 173 >gi|27365037|ref|NP_760565.1| ribosomal RNA small subunit methyltransferase C [Vibrio vulnificus CMCP6] gi|81844705|sp|Q8DBY0|RSMC_VIBVU RecName: Full=Ribosomal RNA small subunit methyltransferase C; AltName: Full=16S rRNA m2G1207 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rsmC gi|27361183|gb|AAO10092.1| Ribosomal RNA small subunit methyltransferase C [Vibrio vulnificus CMCP6] Length = 340 Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust. Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 2/75 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LD G G G + + K +P + DI+ AL +++ NG+ R SD +S Sbjct: 203 KVLDFGCGAGVIGAFMAKRNPAIELEMCDINAYALASSEATLAANGLQGR--VFASDIYS 260 Query: 160 SVEGLFDVIVSNPPY 174 + I+SNPP+ Sbjct: 261 DTADDYRFIISNPPF 275 >gi|28899657|ref|NP_799262.1| ribosomal protein L11 methyltransferase [Vibrio parahaemolyticus RIMD 2210633] gi|153839616|ref|ZP_01992283.1| ribosomal protein L11 methyltransferase [Vibrio parahaemolyticus AQ3810] gi|260361497|ref|ZP_05774544.1| ribosomal protein L11 methyltransferase [Vibrio parahaemolyticus K5030] gi|260878172|ref|ZP_05890527.1| ribosomal protein L11 methyltransferase [Vibrio parahaemolyticus AN-5034] gi|260895468|ref|ZP_05903964.1| ribosomal protein L11 methyltransferase [Vibrio parahaemolyticus Peru-466] gi|260903324|ref|ZP_05911719.1| ribosomal protein L11 methyltransferase [Vibrio parahaemolyticus AQ4037] gi|38605240|sp|Q87KU2|PRMA_VIBPA RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11 Mtase gi|28807909|dbj|BAC61146.1| ribosomal protein L11 methyltransferase [Vibrio parahaemolyticus RIMD 2210633] gi|149746855|gb|EDM57843.1| ribosomal protein L11 methyltransferase [Vibrio parahaemolyticus AQ3810] gi|308088059|gb|EFO37754.1| ribosomal protein L11 methyltransferase [Vibrio parahaemolyticus Peru-466] gi|308094108|gb|EFO43803.1| ribosomal protein L11 methyltransferase [Vibrio parahaemolyticus AN-5034] gi|308109531|gb|EFO47071.1| ribosomal protein L11 methyltransferase [Vibrio parahaemolyticus AQ4037] gi|308112847|gb|EFO50387.1| ribosomal protein L11 methyltransferase [Vibrio parahaemolyticus K5030] gi|328472221|gb|EGF43091.1| ribosomal protein L11 methyltransferase [Vibrio parahaemolyticus 10329] Length = 295 Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust. Identities = 34/112 (30%), Positives = 57/112 (50%), Gaps = 17/112 (15%) Query: 74 PRPET-ELLVDSALAFS----------LPRIEKRDVV--RILDLGTGTGAVCLALLKESP 120 P P+ +++D LAF L +E D+ ++D G G+G + +A +K Sbjct: 123 PEPDAVNVMLDPGLAFGTGTHPTTALCLEWLESMDLSGKTVIDFGCGSGILAIAAIKLG- 181 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF-DVIVSN 171 K +G+DI +AL +K NA NGV+++ + + EGL DV+V+N Sbjct: 182 AEKVIGIDIDPQALLASKDNAERNGVADKLEVYLPQ--NQPEGLIADVVVAN 231 >gi|313836078|gb|EFS73792.1| methyltransferase small domain protein [Propionibacterium acnes HL037PA2] gi|314929614|gb|EFS93445.1| methyltransferase small domain protein [Propionibacterium acnes HL044PA1] gi|314970610|gb|EFT14708.1| methyltransferase small domain protein [Propionibacterium acnes HL037PA3] gi|328906180|gb|EGG25955.1| methyltransferase small domain protein [Propionibacterium sp. P08] Length = 206 Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust. Identities = 26/72 (36%), Positives = 37/72 (51%), Gaps = 1/72 (1%) Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 LDLG G G + AL + P + V VD++ A+++ NA GV +R + D Sbjct: 71 LDLGCGYGPIACALGRACPGSRVVSVDVNDLAIDLTTRNAKALGVGDRVHACRPDEVDP- 129 Query: 162 EGLFDVIVSNPP 173 + FD I SNPP Sbjct: 130 DLRFDEIWSNPP 141 >gi|258511431|ref|YP_003184865.1| hypothetical protein Aaci_1451 [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257478157|gb|ACV58476.1| Protein of unknown function methylase putative [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 413 Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust. Identities = 27/83 (32%), Positives = 40/83 (48%), Gaps = 7/83 (8%) Query: 97 DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 D +LD TGA + L G VDIS A+E+A+ NA NGV +R D ++ Sbjct: 235 DGAHVLDCFCHTGAFAVHALHYGAA-HGTAVDISADAVELARQNARRNGVLDRADFAVAN 293 Query: 157 WFSSVE------GLFDVIVSNPP 173 F + +DV++ +PP Sbjct: 294 AFDYLREQDARGARYDVVILDPP 316 >gi|254773164|ref|ZP_05214680.1| thiopurine S-methyltransferase (tpmt) superfamily protein [Mycobacterium avium subsp. avium ATCC 25291] Length = 222 Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust. Identities = 48/196 (24%), Positives = 83/196 (42%), Gaps = 30/196 (15%) Query: 73 EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCK 132 EP+PE L+++ +LD G G AV L L + F VG+D S Sbjct: 25 EPQPEIAALIEAGKFHG----------DVLDAGCGEAAVSLYLAERG--FTTVGLDQSPT 72 Query: 133 ALEIAKSNAVTNGV-SERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFD 191 A+++A+ A G+ S F+ F+ +G F IV +S + + +E+R+ Sbjct: 73 AIKLAREKAARRGLTSASFEVADISDFTGYDGRFGTIV------DSTLFHSMPVELREGY 126 Query: 192 PRISLDGGIDGLSHYRTI-------ADGVSRHLNKDGLCSVEIGYNQKVDVV---RIFES 241 R + G S++ + A+G + +D L V +G +D + RI + Sbjct: 127 QRSIVQAAAPGASYFVLVFDRNAMPAEGPVNAVTEDELREV-VGKYWVIDEIRPARIHAN 185 Query: 242 RKLFLVNAFKDYGGND 257 + AF+ + G D Sbjct: 186 VPENFLAAFEAFAGAD 201 >gi|254302821|ref|ZP_04970179.1| N6-adenine-specific methyltransferase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148323013|gb|EDK88263.1| N6-adenine-specific methyltransferase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 182 Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust. Identities = 34/126 (26%), Positives = 60/126 (47%), Gaps = 10/126 (7%) Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 R+ + F+ RP E + +S + P IE D + LDL +G+G++ L + + Sbjct: 11 RIIKTRKGFDTRPTLESVKESLFSIIAPYIE--DSI-FLDLFSGSGSISLEAISRGAK-R 66 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPPYIES 177 V ++ +AL+ N G S+R ++D ++E L FD+I +PPY ++ Sbjct: 67 AVMIEKDGEALKYIIENIDNLGFSDRCRAYKNDVIRAIEILGRKNEKFDIIFMDPPYQDN 126 Query: 178 VIVDCL 183 V L Sbjct: 127 VTKKVL 132 >gi|24113916|ref|NP_708426.1| putative enzyme [Shigella flexneri 2a str. 301] gi|30063976|ref|NP_838147.1| putative enzyme [Shigella flexneri 2a str. 2457T] gi|110806519|ref|YP_690039.1| hypothetical protein SFV_2638 [Shigella flexneri 5 str. 8401] gi|331678572|ref|ZP_08379247.1| hypothetical protein ECPG_01247 [Escherichia coli H591] gi|332278267|ref|ZP_08390680.1| conserved hypothetical protein [Shigella sp. D9] gi|24053019|gb|AAN44133.1| putative enzyme [Shigella flexneri 2a str. 301] gi|30042232|gb|AAP17957.1| putative enzyme [Shigella flexneri 2a str. 2457T] gi|110616067|gb|ABF04734.1| putative enzyme [Shigella flexneri 5 str. 8401] gi|281601987|gb|ADA74971.1| hypothetical protein SFxv_2894 [Shigella flexneri 2002017] gi|331075032|gb|EGI46352.1| hypothetical protein ECPG_01247 [Escherichia coli H591] gi|332100619|gb|EGJ03965.1| conserved hypothetical protein [Shigella sp. D9] Length = 285 Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust. Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 5/89 (5%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 V R LD+G G+G + L L + + + V++ +A A+ N + +ER + +D Sbjct: 85 VKRCLDIGAGSGLLALMLAQRTSDSVIIDAVELESEAAAQAQENINQSPWAERINVHTAD 144 Query: 157 ---WFSSVEGLFDVIVSNPPYIESVIVDC 182 W + FD+I+SNPPY + V+C Sbjct: 145 IQQWITQQTVRFDLIISNPPYYQQG-VEC 172 >gi|330444964|ref|ZP_08308618.1| ribosomal protein L11 methyltransferase [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328493082|dbj|GAA03115.1| ribosomal protein L11 methyltransferase [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 294 Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust. Identities = 39/131 (29%), Positives = 64/131 (48%), Gaps = 26/131 (19%) Query: 74 PRPET-ELLVDSALAFS----------LPRIEKRDVV--RILDLGTGTGAVCLALLKESP 120 P P+ +L+D LAF L ++ +D+ I+D G G+G + +A LK Sbjct: 123 PEPDAVNVLLDPGLAFGTGTHPTTSLCLEWLDGQDLTGKTIIDFGCGSGILAIAALKLG- 181 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFSSVEGLFDVIVSN-------- 171 K +G+DI +A+ ++ NA NGVSE + L D ++ D++V+N Sbjct: 182 AAKVIGIDIDPQAILASRDNAERNGVSENLELYLPKDQPEGIQA--DIVVANILAGPLRE 239 Query: 172 -PPYIESVIVD 181 P I+S+I D Sbjct: 240 LSPVIKSLIKD 250 >gi|229524747|ref|ZP_04414152.1| ribosomal protein L11 methyltransferase [Vibrio cholerae bv. albensis VL426] gi|229338328|gb|EEO03345.1| ribosomal protein L11 methyltransferase [Vibrio cholerae bv. albensis VL426] Length = 295 Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust. Identities = 28/73 (38%), Positives = 42/73 (57%), Gaps = 6/73 (8%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159 ++D G G+G + +A +K K +G+DI +AL +K NA NGV ++ D L D Sbjct: 163 VIDFGCGSGILAIAAIKLG-AAKVIGIDIDPQALLASKDNAARNGVEDKIDVYLPKD--- 218 Query: 160 SVEGLF-DVIVSN 171 EGL DV+V+N Sbjct: 219 QPEGLVADVVVAN 231 >gi|254172850|ref|ZP_04879524.1| ribosomal RNA small subunit methyltransferase C [Thermococcus sp. AM4] gi|214033006|gb|EEB73834.1| ribosomal RNA small subunit methyltransferase C [Thermococcus sp. AM4] Length = 195 Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust. Identities = 43/163 (26%), Positives = 65/163 (39%), Gaps = 35/163 (21%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+LDLG G GA+ + + + V D++ +A+ IA+ N NGV + + Sbjct: 59 RVLDLGCGYGAIGIVASRFVDYV--VMTDVNRRAVSIARKNLKINGVRNA-EVRWGSLYE 115 Query: 160 SVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 V+G FD I++NPP G EV R I RHLN Sbjct: 116 PVKGEKFDSIITNPPV-------HAGKEV------------------LREIVINAPRHLN 150 Query: 219 KDGLCSVEIGYNQKVDVVRIF------ESRKLFLVNAFKDYGG 255 GL + I Q ++ E R+L + ++ Y G Sbjct: 151 DGGLLQLVIKTKQGAKYIKALMDEHFTEVRELAKGSGYRVYAG 193 >gi|212697534|ref|ZP_03305662.1| hypothetical protein ANHYDRO_02107 [Anaerococcus hydrogenalis DSM 7454] gi|212675533|gb|EEB35140.1| hypothetical protein ANHYDRO_02107 [Anaerococcus hydrogenalis DSM 7454] Length = 374 Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust. Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 1/53 (1%) Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS-SVEGLFDVIVSNPPYIE 176 +G DIS A+++AK+NA+ GV E L D+ +++ F + +SNPPY E Sbjct: 254 LGSDISKNAIKLAKNNALNAGVYEDITFLNKDFREINLKDNFGIFISNPPYGE 306 >gi|296110374|ref|YP_003620755.1| methyltransferase (putative) [Leuconostoc kimchii IMSNU 11154] gi|295831905|gb|ADG39786.1| methyltransferase (putative) [Leuconostoc kimchii IMSNU 11154] Length = 253 Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust. Identities = 48/165 (29%), Positives = 74/165 (44%), Gaps = 19/165 (11%) Query: 102 LDLGTGTGAVCLALLKESPFFKGVG----VDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 +DLG GTGAV L SP K +G V+I + E+A+ + NG+ +R L SD Sbjct: 53 VDLGAGTGAVGLFY---SP--KVIGKIKLVEIQPELAEMAQRSIEMNGLQKRVSVLLSDM 107 Query: 158 ---FSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213 F+ ++ G + ++SNPPY + + R L + GL A Sbjct: 108 KDIFNDIQPGSVETVLSNPPYFPLNEMTKTNHDTHYELARHELTIDLPGL------AQVA 161 Query: 214 SRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258 ++ L +G + ++ DV FE RKL + YG +DR Sbjct: 162 NKLLKNNGKFYMVHRPDRLTDVFSAFEQRKLRIKRMQFVYGKSDR 206 >gi|291556131|emb|CBL33248.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Eubacterium siraeum V10Sc8a] Length = 493 Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust. Identities = 32/104 (30%), Positives = 54/104 (51%), Gaps = 14/104 (13%) Query: 76 PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135 P E L SA F+ P+ + +LDL G G + L++ + + K +GV+I +A+E Sbjct: 285 PCAEQLYSSACDFAEPKGKT-----VLDLYCGAGTIGLSMARTAK--KIIGVEIVPEAIE 337 Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEGLF------DVIVSNPP 173 AK NA+ NG++ + + +D + L DVI+ +PP Sbjct: 338 NAKQNALANGIT-NCEFICADAAEAARILHSRSLRPDVIMVDPP 380 >gi|262196150|ref|YP_003267359.1| amino acid adenylation protein [Haliangium ochraceum DSM 14365] gi|262079497|gb|ACY15466.1| amino acid adenylation domain protein [Haliangium ochraceum DSM 14365] Length = 2012 Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust. Identities = 42/147 (28%), Positives = 71/147 (48%), Gaps = 28/147 (19%) Query: 54 ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113 + GW Y+ + S + E + ++ RI + R+L++G GTG L Sbjct: 1026 LAGWTSSYDQQAIPSEEMLE-----------WVENTVERILETKPSRVLEIGCGTG---L 1071 Query: 114 ALLKESPFFKG-VGVDISCKALEIAKSN-AVTNGVSERFDTLQSDWFSSV-EGLFDVIVS 170 LL+ +P + VG+D S +ALE + + A + VS + +D F+ + + FD ++ Sbjct: 1072 LLLRVAPHVERFVGMDASSQALEYLRPHVAEFDNVS--LEQRTADQFAGLPDDSFDAVIL 1129 Query: 171 N--------PPYIESVIVDCLGLEVRD 189 N P Y+E+VI CL + VRD Sbjct: 1130 NSVAQYFPSPEYLETVIAGCLSV-VRD 1155 >gi|37680915|ref|NP_935524.1| 16S RNA G1207 methylase RsmC [Vibrio vulnificus YJ016] gi|81859839|sp|Q7MHY6|RSMC_VIBVY RecName: Full=Ribosomal RNA small subunit methyltransferase C; AltName: Full=16S rRNA m2G1207 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rsmC gi|37199665|dbj|BAC95495.1| 16S RNA G1207 methylase RsmC [Vibrio vulnificus YJ016] Length = 340 Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust. Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 2/75 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LD G G G + + K +P + DI+ AL +++ NG+ R SD +S Sbjct: 203 KVLDFGCGAGVIGAFMAKRNPTIELEMCDINAYALASSEATLAANGLQGR--VFASDIYS 260 Query: 160 SVEGLFDVIVSNPPY 174 + I+SNPP+ Sbjct: 261 DTADDYRFIISNPPF 275 >gi|225018720|ref|ZP_03707912.1| hypothetical protein CLOSTMETH_02670 [Clostridium methylpentosum DSM 5476] gi|224948448|gb|EEG29657.1| hypothetical protein CLOSTMETH_02670 [Clostridium methylpentosum DSM 5476] Length = 243 Score = 40.4 bits (93), Expect = 0.29, Method: Compositional matrix adjust. Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 3/72 (4%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+LDLG G G C+ +++ VG+DIS K L++A+ V R ++ F Sbjct: 45 RVLDLGCGYGWHCIYAMEQGA-ASAVGIDISHKMLQVAREKTAFPQVDYRCMPIEEIDFP 103 Query: 160 SVEGLFDVIVSN 171 S G FDV++S+ Sbjct: 104 S--GSFDVVISS 113 >gi|323334230|gb|EGA75613.1| Mtq2p [Saccharomyces cerevisiae AWRI796] Length = 221 Score = 40.4 bits (93), Expect = 0.29, Method: Compositional matrix adjust. Identities = 40/148 (27%), Positives = 73/148 (49%), Gaps = 9/148 (6%) Query: 101 ILDLGTGTGAVCLALLKESPFFKG----VGVDISCKALEIAKSNAVTNGVSERF-DTLQS 155 + ++G+G+G V L++ + + VDI+ ALE A N F + +Q+ Sbjct: 46 VCEIGSGSGIVTTFLMQNKIIPQENSIHLAVDINPWALEATLDTAKLNSCKSSFLEVIQA 105 Query: 156 DWFSSV-EGLFDVIVSNPPYIESVIV-DCLG-LEVRDFDPRISLDGGIDGLSHYRTIADG 212 D SS+ + DV++ NPPY+ + V D G E D ++L GG DG++ + Sbjct: 106 DLNSSIRDNQVDVLIFNPPYVPAECVPDVPGSREEADQWLDLALLGGKDGMAITDKLLRQ 165 Query: 213 VSRHLNKDGLCSVEI-GYNQKVDVVRIF 239 + + L+ DG+ + N+ +V++ F Sbjct: 166 LEQILSPDGVAYILFCARNKPKEVIKRF 193 >gi|302537499|ref|ZP_07289841.1| methyltransferase type 12 [Streptomyces sp. C] gi|302446394|gb|EFL18210.1| methyltransferase type 12 [Streptomyces sp. C] Length = 504 Score = 40.4 bits (93), Expect = 0.29, Method: Compositional matrix adjust. Identities = 21/50 (42%), Positives = 30/50 (60%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 R+LDLG G G + ALLK+ + + +GVD+S +AL IA + ER Sbjct: 311 RVLDLGCGEGHLVQALLKDPAYTEVLGVDVSVRALTIAARRLRLERMGER 360 >gi|320007975|gb|ADW02825.1| Methyltransferase type 12 [Streptomyces flavogriseus ATCC 33331] Length = 500 Score = 40.4 bits (93), Expect = 0.29, Method: Compositional matrix adjust. Identities = 20/38 (52%), Positives = 27/38 (71%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137 R+LDLG G G + ALLK+ F + VGVD+S +AL +A Sbjct: 310 RVLDLGCGQGQLLQALLKDVRFTEIVGVDVSMRALTVA 347 >gi|240104027|ref|YP_002960336.1| Ribosomal RNA small subunit methyltransferase C (rsmC) [Thermococcus gammatolerans EJ3] gi|239911581|gb|ACS34472.1| Ribosomal RNA small subunit methyltransferase C (rsmC) [Thermococcus gammatolerans EJ3] Length = 195 Score = 40.4 bits (93), Expect = 0.29, Method: Compositional matrix adjust. Identities = 43/163 (26%), Positives = 65/163 (39%), Gaps = 35/163 (21%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+LDLG G GA+ + + + V D++ +A+ IA+ N NGV + + Sbjct: 59 RVLDLGCGYGAIGIVASRFVDYV--VMTDVNKRAVSIARKNLKINGVRNA-EVRWGSLYE 115 Query: 160 SVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 V+G FD I++NPP G EV R I RHLN Sbjct: 116 PVKGEKFDSIITNPPV-------HAGKEV------------------LREIVINAPRHLN 150 Query: 219 KDGLCSVEIGYNQKVDVVRIF------ESRKLFLVNAFKDYGG 255 GL + I Q ++ E R+L + ++ Y G Sbjct: 151 DGGLLQLVIKTKQGAKYIKALMEETFTEVRELAKGSGYRVYAG 193 >gi|237736824|ref|ZP_04567305.1| methyltransferase [Fusobacterium mortiferum ATCC 9817] gi|229420686|gb|EEO35733.1| methyltransferase [Fusobacterium mortiferum ATCC 9817] Length = 393 Score = 40.4 bits (93), Expect = 0.29, Method: Compositional matrix adjust. Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 7/81 (8%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 R LD+ + +G +A LKE+ K V +D ALE+ + N NG + T++ D F Sbjct: 218 TRFLDVFSSSGGFSMAALKENCK-KVVAIDKEPHALELCRENYELNGFEGNYTTMEGDAF 276 Query: 159 SSVEGL------FDVIVSNPP 173 ++ L +DVI +PP Sbjct: 277 LLLKTLVGRGEKYDVITLDPP 297 >gi|218682093|ref|ZP_03529694.1| ribosomal protein L11 methyltransferase [Rhizobium etli CIAT 894] Length = 191 Score = 40.4 bits (93), Expect = 0.29, Method: Compositional matrix adjust. Identities = 28/85 (32%), Positives = 41/85 (48%), Gaps = 9/85 (10%) Query: 93 IEKRDVVRILDLGTGTGAVCLAL--LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150 + R V LDLGTG+G + +A+ LK P DI A ++A N NG++ Sbjct: 46 VRSRPVRNALDLGTGSGVLAIAVRKLKNIPVL---ATDIDPIATKVAAENVRRNGIASGI 102 Query: 151 DTLQSDWFSSV----EGLFDVIVSN 171 T + F S G FD+I++N Sbjct: 103 VTRTAPGFHSTAFSEHGPFDLIIAN 127 >gi|169830047|ref|YP_001700205.1| hypothetical protein Bsph_4631 [Lysinibacillus sphaericus C3-41] gi|168994535|gb|ACA42075.1| Hypothetical ybxB protein [Lysinibacillus sphaericus C3-41] Length = 202 Score = 40.4 bits (93), Expect = 0.29, Method: Compositional matrix adjust. Identities = 30/98 (30%), Positives = 52/98 (53%), Gaps = 10/98 (10%) Query: 78 TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137 + +L+D AF +P I+ I D+G G G + L++ K +P +DI+ +A+ ++ Sbjct: 48 SRVLID---AFQMPNIDGA----IFDIGCGYGPIGLSIAKANPDRTVCMMDINERAVALS 100 Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFD--VIVSNPP 173 + NA NGV + SD S V+ + I++NPP Sbjct: 101 QKNAQVNGV-QNVRIFVSDGLSMVDKDIEAAAILTNPP 137 >gi|240850051|ref|YP_002971444.1| 3-demethylubiquinone-9 3-methyltransferase [Bartonella grahamii as4aup] gi|240267174|gb|ACS50762.1| 3-demethylubiquinone-9 3-methyltransferase [Bartonella grahamii as4aup] Length = 247 Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust. Identities = 22/74 (29%), Positives = 43/74 (58%), Gaps = 2/74 (2%) Query: 97 DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 D ++ILD+G G G +C + + VGVD + +E+AK++A N +S + T+ ++ Sbjct: 64 DNLKILDIGCGGGLLCEPMARLGAMV--VGVDAAQTNIEVAKTHAAQNDLSIDYRTMTAE 121 Query: 157 WFSSVEGLFDVIVS 170 ++ FD+I++ Sbjct: 122 ALANEGEKFDIILN 135 >gi|167394422|ref|XP_001733536.1| dimethyladenosine transferase [Entamoeba dispar SAW760] gi|165894697|gb|EDR22603.1| dimethyladenosine transferase, putative [Entamoeba dispar SAW760] Length = 252 Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust. Identities = 26/76 (34%), Positives = 44/76 (57%), Gaps = 6/76 (7%) Query: 101 ILDLGTGTGAVCLALLKESPFFKG-VGVDISCK-ALEIAKSNAVTNGVSERFDTLQSDWF 158 +L++G GTG + + +L PF K + ++I + A E+ K +VT+ V ++ + +Q D+ Sbjct: 42 VLEIGPGTGNLTMKML---PFCKKLIAIEIDPRMAAELKKRVSVTDYV-KKLEIIQGDFL 97 Query: 159 SSVEGLFDVIVSNPPY 174 FDV VSN PY Sbjct: 98 KVELPYFDVCVSNTPY 113 >gi|54297147|ref|YP_123516.1| hypothetical protein lpp1192 [Legionella pneumophila str. Paris] gi|53750932|emb|CAH12343.1| hypothetical protein lpp1192 [Legionella pneumophila str. Paris] Length = 390 Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust. Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 2/75 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWF 158 R+LDL T TG L K + VD S +A+E AK+NAV N ++ F + + Sbjct: 223 RVLDLYTFTGGFALHAAKAGAL-QVTAVDSSAQAIEQAKNNAVLNHLNTIEFIKADAREY 281 Query: 159 SSVEGLFDVIVSNPP 173 + G +DV++ +PP Sbjct: 282 LKMAGEYDVVILDPP 296 >gi|315055317|ref|XP_003177033.1| hypothetical protein MGYG_01117 [Arthroderma gypseum CBS 118893] gi|311338879|gb|EFQ98081.1| hypothetical protein MGYG_01117 [Arthroderma gypseum CBS 118893] Length = 294 Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust. Identities = 33/95 (34%), Positives = 48/95 (50%), Gaps = 27/95 (28%) Query: 101 ILDLGTGTGAVCLALLKESPFFKG--VGVDISCKALEIAKSNA-VTNGVSE-----RFDT 152 ILDLGTG G++ L LL+E F G VGVD S K++E+A+ A ++G E RF+ Sbjct: 109 ILDLGTGNGSM-LTLLREEGGFTGPMVGVDYSIKSIELARQLAGQSDGQKEGDGGIRFEV 167 Query: 153 L------------------QSDWFSSVEGLFDVIV 169 + DWF +G FD+++ Sbjct: 168 WDILDPRHEEDIRGGVFGKEVDWFPFEQGGFDIVL 202 >gi|153938423|ref|YP_001389425.1| hypothetical protein CLI_0117 [Clostridium botulinum F str. Langeland] gi|152934319|gb|ABS39817.1| conserved hypothetical protein [Clostridium botulinum F str. Langeland] gi|295317535|gb|ADF97912.1| conserved hypothetical protein [Clostridium botulinum F str. 230613] Length = 246 Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust. Identities = 24/97 (24%), Positives = 51/97 (52%), Gaps = 6/97 (6%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 +D+ L + P I ++ +++DL +GTG + L ++ +G++I + ++AK + Sbjct: 32 IDAVLLANFPTI--KNGAKVVDLCSGTGIISFILAGKTNASNIIGIEIQKEIADMAKRSI 89 Query: 142 VTNGVSERFDTLQSDW--FSSVEGL--FDVIVSNPPY 174 N + E+ ++ D ++G+ DV+ NPPY Sbjct: 90 KYNNLQEKVRFIEGDLKNLKLLKGIEKVDVVTVNPPY 126 >gi|320155418|ref|YP_004187797.1| ribosomal RNA small subunit methyltransferase C [Vibrio vulnificus MO6-24/O] gi|319930730|gb|ADV85594.1| ribosomal RNA small subunit methyltransferase C [Vibrio vulnificus MO6-24/O] Length = 340 Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust. Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 2/75 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LD G G G + + K +P + DI+ AL +++ NG+ R SD +S Sbjct: 203 KVLDFGCGAGVIGAFMAKRNPTIELEMCDINAYALASSEATLAANGLQGR--VFASDIYS 260 Query: 160 SVEGLFDVIVSNPPY 174 + I+SNPP+ Sbjct: 261 DTADDYRFIISNPPF 275 >gi|260771799|ref|ZP_05880717.1| predicted O-methyltransferase [Vibrio metschnikovii CIP 69.14] gi|260613091|gb|EEX38292.1| predicted O-methyltransferase [Vibrio metschnikovii CIP 69.14] Length = 240 Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust. Identities = 35/127 (27%), Positives = 55/127 (43%), Gaps = 10/127 (7%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+LD+G GTG + L + + VDI +A A +N + S R + + D + Sbjct: 45 RLLDIGCGTGLLSLMCAQRFTHSQICAVDIDQQAFLAASNNIRRSVWSSRIEVMHGDINT 104 Query: 160 -SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 FD I+ NPPY S G + I+ + LSH + + D ++HL Sbjct: 105 LRFTQPFDAIICNPPYFNS------GQPAQQQTRAIARH--TETLSH-QQLLDCFAQHLP 155 Query: 219 KDGLCSV 225 G S+ Sbjct: 156 PQGTASL 162 >gi|222151580|ref|YP_002560736.1| hypothetical protein MCCL_1333 [Macrococcus caseolyticus JCSC5402] gi|222120705|dbj|BAH18040.1| conserved hypothetical protein [Macrococcus caseolyticus JCSC5402] Length = 244 Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust. Identities = 39/126 (30%), Positives = 59/126 (46%), Gaps = 22/126 (17%) Query: 51 IHRILGWRDFYN----VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGT 106 +H I DF+N VRL P E++ + LP + + ILD+G Sbjct: 1 MHNIYDNDDFFNRYKEVRLN-------PTSYNEMIEVPRIKELLPNLYNK---TILDIGC 50 Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW--FSSVEGL 164 G G + +L++SP + G+DIS ++ AK N V+ L +D+ F SV Sbjct: 51 GMGQLVQYMLEQSP-IQITGIDISSNMIQKAKENIQDQHVT----FLNNDFMEFDSVAD- 104 Query: 165 FDVIVS 170 +DVIVS Sbjct: 105 YDVIVS 110 >gi|315231428|ref|YP_004071864.1| LSU methyltransferase [Thermococcus barophilus MP] gi|315184456|gb|ADT84641.1| LSU methyltransferase [Thermococcus barophilus MP] Length = 396 Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust. Identities = 26/82 (31%), Positives = 44/82 (53%), Gaps = 11/82 (13%) Query: 100 RILDLGTGTG--AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 ++LD+ T TG A+ A+ K + +D S +A+E AK NA NGV ++ + + Sbjct: 220 KVLDVFTYTGGFAIHAAVAGAE---KVIAIDKSPRAIEQAKENAKLNGVEDKMEFIVGSA 276 Query: 158 FSSVEGL------FDVIVSNPP 173 F +E L FD+++ +PP Sbjct: 277 FPEMEKLQKRGEKFDIVILDPP 298 >gi|27364635|ref|NP_760163.1| ribosomal protein L11 methyltransferase [Vibrio vulnificus CMCP6] gi|320155029|ref|YP_004187408.1| ribosomal protein L11 methyltransferase [Vibrio vulnificus MO6-24/O] gi|38605292|sp|Q8DD03|PRMA_VIBVU RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11 Mtase gi|27360780|gb|AAO09690.1| ribosomal protein L11 methyltransferase [Vibrio vulnificus CMCP6] gi|319930341|gb|ADV85205.1| ribosomal protein L11 methyltransferase [Vibrio vulnificus MO6-24/O] Length = 295 Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust. Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 8/89 (8%) Query: 87 AFSLPRIEKRDVV--RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN 144 A L +E D+ ++D G G+G + +A +K K +G+DI +AL +K NA N Sbjct: 147 ALCLEWLESLDLSGKTVIDFGCGSGILAIAAIKLG-AEKVIGIDIDPQALLASKDNAQRN 205 Query: 145 GVSERFDT-LQSDWFSSVEGLF-DVIVSN 171 GV+++ D L D EGL DV+V+N Sbjct: 206 GVADQLDVYLPQD---QPEGLLADVVVAN 231 >gi|88855439|ref|ZP_01130103.1| hypothetical protein A20C1_01411 [marine actinobacterium PHSC20C1] gi|88815346|gb|EAR25204.1| hypothetical protein A20C1_01411 [marine actinobacterium PHSC20C1] Length = 207 Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust. Identities = 33/98 (33%), Positives = 46/98 (46%), Gaps = 4/98 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LDLG G G + L L ESP VD++ +AL++ ++NA + L D Sbjct: 63 LLDLGCGWGPMALTLALESPHATVWAVDVNERALDLVRANAKKLSIPNINAVLPGDVPED 122 Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG 198 V F I SNPP V D L + + PR+ LD Sbjct: 123 VT--FMSIWSNPPI--RVGKDELHNILETWLPRLELDA 156 >gi|218441230|ref|YP_002379559.1| methyltransferase type 11 [Cyanothece sp. PCC 7424] gi|218173958|gb|ACK72691.1| Methyltransferase type 11 [Cyanothece sp. PCC 7424] Length = 286 Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust. Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 11/95 (11%) Query: 100 RILDLGTGTGAVCLALLKESPFFKG--VGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 RILDLG GTG+ L LLK++ F G +G+D+S L +A A G+S ++ + Sbjct: 102 RILDLGCGTGSTTL-LLKQT-FVDGEIIGIDLSPYMLAMANYKAKQAGLSVQWQQGNALK 159 Query: 158 FSSVEGLFDVIVSN------PPYI-ESVIVDCLGL 185 + FDV+ ++ PP + ES++ +C L Sbjct: 160 THFPDASFDVVTASLLFHETPPMVAESILKECFRL 194 >gi|262037709|ref|ZP_06011151.1| putative methyltransferase UbiE [Leptotrichia goodfellowii F0264] gi|261748181|gb|EEY35578.1| putative methyltransferase UbiE [Leptotrichia goodfellowii F0264] Length = 235 Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust. Identities = 31/90 (34%), Positives = 47/90 (52%), Gaps = 7/90 (7%) Query: 82 VDSALAFSL-PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140 V+ + FSL P ++ + ++LDLG G G C+ +K K VG+DIS K L+IA+ Sbjct: 30 VEKPMLFSLLPDLKNK---KVLDLGCGYGENCVKFIKMGA-EKVVGIDISEKMLDIAQKE 85 Query: 141 AVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170 V + L + S + FD+IVS Sbjct: 86 NSDKKVV--YLNLAMEDISQINEKFDIIVS 113 >gi|261192711|ref|XP_002622762.1| methyltransferase [Ajellomyces dermatitidis SLH14081] gi|239589244|gb|EEQ71887.1| methyltransferase [Ajellomyces dermatitidis SLH14081] gi|239610220|gb|EEQ87207.1| methyltransferase [Ajellomyces dermatitidis ER-3] Length = 342 Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust. Identities = 26/71 (36%), Positives = 35/71 (49%), Gaps = 5/71 (7%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R LDLGTGTG L E P + +GVD+S + V V D +++DW Sbjct: 109 RALDLGTGTGLWALDFGDEYPSAQAIGVDLSP-----IQPTWVAPNVKFYVDDIETDWAY 163 Query: 160 SVEGLFDVIVS 170 S + FD+I S Sbjct: 164 SRDEPFDLIHS 174 >gi|218295159|ref|ZP_03495995.1| methyltransferase small [Thermus aquaticus Y51MC23] gi|218244362|gb|EED10887.1| methyltransferase small [Thermus aquaticus Y51MC23] Length = 374 Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust. Identities = 46/151 (30%), Positives = 70/151 (46%), Gaps = 11/151 (7%) Query: 53 RILGWR-DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAV 111 RILG FY++ S+ + + LL+ AL ++P ++ R R+LDLG G GA+ Sbjct: 192 RILGQAYTFYHLPGVFSAGRVD---KASLLLLEALVTAVPSLKGR---RVLDLGAGYGAL 245 Query: 112 CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSN 171 L L + V D+ L + +S NG+ R D + E FD+IV+N Sbjct: 246 TLPLARLGAEVTAVEDDL-VSVLSLRRSLE-ENGLEARALHSDVDEALTPEERFDIIVTN 303 Query: 172 PPYI--ESVIVDCLGLEVRDFDPRISLDGGI 200 PP+ +VI+D V R+ GG Sbjct: 304 PPFHVGGAVILDVAQAFVEAAAARLKPGGGF 334 >gi|239918289|ref|YP_002957847.1| methyltransferase family protein [Micrococcus luteus NCTC 2665] gi|239839496|gb|ACS31293.1| methyltransferase family protein [Micrococcus luteus NCTC 2665] Length = 558 Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust. Identities = 33/110 (30%), Positives = 48/110 (43%), Gaps = 12/110 (10%) Query: 76 PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135 PE L V A ++R V R LD+G G G L LL + D+S +AL Sbjct: 164 PEHVLGVGRASPTLAGATQRRPVARALDVGVGCGIQTLHLLAHADHV--TATDLSERALA 221 Query: 136 IAKSNAVTNG---------VSERFDTLQSDWFSSVEG-LFDVIVSNPPYI 175 + N + N + +R D + V G FD++VSNPP++ Sbjct: 222 FTRFNLLLNADVLGLDRERLEDRVRLAAGDLLAPVAGERFDLVVSNPPFV 271 >gi|153215832|ref|ZP_01950164.1| conserved hypothetical protein [Vibrio cholerae 1587] gi|124114549|gb|EAY33369.1| conserved hypothetical protein [Vibrio cholerae 1587] Length = 216 Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust. Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 5/80 (6%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD---W 157 ILD+G GTG + L + P +DI A A+ N + +E + +D W Sbjct: 22 ILDIGCGTGLLSLMCAQRFPHAHITALDIEQTAYLAAEHNRQQSPWAEHIECQHADILHW 81 Query: 158 FSSVEGLFDVIVSNPPYIES 177 S F I+ NPPY S Sbjct: 82 LPSKR--FAAIICNPPYFNS 99 >gi|21225714|ref|NP_631493.1| hypothetical protein SCO7445 [Streptomyces coelicolor A3(2)] gi|7160122|emb|CAB76308.1| hypothetical protein SC5C11.02 [Streptomyces coelicolor A3(2)] Length = 245 Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust. Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 3/75 (4%) Query: 97 DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 D R+LDLG G L L P GVD+S AL+ A+ A GV++R D Sbjct: 36 DGARVLDLGCGGAEWLLRALAGHPRLTAEGVDVSASALDHARGAAARLGVADRLTLHHED 95 Query: 157 W--FSSVEGLFDVIV 169 F++ G FD+++ Sbjct: 96 AARFAAPHG-FDLVL 109 >gi|327355275|gb|EGE84132.1| methyltransferase [Ajellomyces dermatitidis ATCC 18188] Length = 332 Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust. Identities = 26/71 (36%), Positives = 35/71 (49%), Gaps = 5/71 (7%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R LDLGTGTG L E P + +GVD+S + V V D +++DW Sbjct: 109 RALDLGTGTGLWALDFGDEYPSAQAIGVDLSP-----IQPTWVAPNVKFYVDDIETDWAY 163 Query: 160 SVEGLFDVIVS 170 S + FD+I S Sbjct: 164 SRDEPFDLIHS 174 >gi|308066857|ref|YP_003868462.1| hypothetical protein PPE_00022 [Paenibacillus polymyxa E681] gi|305856136|gb|ADM67924.1| Conserved hypothetical protein [Paenibacillus polymyxa E681] Length = 251 Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust. Identities = 33/119 (27%), Positives = 53/119 (44%), Gaps = 13/119 (10%) Query: 61 YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120 +N+R+ S + F +D+ L I +R +ILDL TG G V L LL Sbjct: 17 HNLRIIQSDEVFS------FSMDAVLLARFAGIPQRG--KILDLCTGNGVVPL-LLTTRT 67 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYI 175 G++I + ++A+ + NG+ + D V G++D I NPPY+ Sbjct: 68 KASIEGIEIQPRLADMARRSVSLNGLESAIQIREGDLRELVHITGHGVYDAITVNPPYM 126 >gi|238762789|ref|ZP_04623758.1| Methyltransferase small [Yersinia kristensenii ATCC 33638] gi|238699094|gb|EEP91842.1| Methyltransferase small [Yersinia kristensenii ATCC 33638] Length = 248 Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust. Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 4/85 (4%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 ++LD+G G+G + L + + S + GV++ +A + A SN + ++R + D Sbjct: 50 KVLDIGCGSGLIALMIAQRSASEVIIDGVELEPEAAQQAISNVAQSPWADRVRIYEQDVH 109 Query: 159 SSVEG---LFDVIVSNPPYIESVIV 180 E +D+IVSNPPY + Sbjct: 110 QFAENHLHQYDLIVSNPPYFAPAVA 134 >gi|218690691|ref|YP_002398903.1| putative S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli ED1a] gi|262828117|sp|B7MYK8|TRMN6_ECO81 RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName: Full=tRNA m6A37 methyltransferase gi|218428255|emb|CAR09174.2| putative S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli ED1a] Length = 245 Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust. Identities = 26/89 (29%), Positives = 46/89 (51%), Gaps = 5/89 (5%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 V R LD+G G+G + L L + + + V++ +A A+ N + +ER + +D Sbjct: 45 VKRCLDIGAGSGLLALMLAQRTDDSVMIDAVELESEAAAQAQENINQSPWAERINVHTAD 104 Query: 157 ---WFSSVEGLFDVIVSNPPYIESVIVDC 182 W + FD+++SNPPY + V+C Sbjct: 105 ILQWITQQTVRFDLVISNPPYYQQG-VEC 132 >gi|301163366|emb|CBW22916.1| conserved hypothetical protein [Bacteroides fragilis 638R] Length = 237 Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust. Identities = 44/151 (29%), Positives = 67/151 (44%), Gaps = 14/151 (9%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW- 157 RILD+GTGTG V L +L + + ++I A + A N + R + + D+ Sbjct: 39 ARILDIGTGTGLVAL-MLAQRCSASVIALEIDETAAQQAAENITRSPWGSRIEVVCQDFR 97 Query: 158 -FSSVEG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214 +S+ +D IVSNPPY D L D + + D LS Y + GVS Sbjct: 98 LYSNKNNSLKYDTIVSNPPY----FTDSLKCP----DSQRNTARHNDNLS-YEELLKGVS 148 Query: 215 RHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245 L+ +G +V I + I S+ L+ Sbjct: 149 NLLSPNGTFTVVIPMDASDSFKDIASSQGLY 179 >gi|296425053|ref|XP_002842058.1| hypothetical protein [Tuber melanosporum Mel28] gi|295638315|emb|CAZ86249.1| unnamed protein product [Tuber melanosporum] Length = 351 Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust. Identities = 34/110 (30%), Positives = 50/110 (45%), Gaps = 20/110 (18%) Query: 60 FYNVRLTLSSDTFEPRPETE------------LLVDSALAFSLPRIEKRDVVRILDLGTG 107 +Y ++LT S P E E LL+D L F P + D+ RILD+GTG Sbjct: 64 WYPIKLTWSRKYLIPNDEAEQDRLDIIHHVFLLLLDGKL-FRAPIGD--DIQRILDVGTG 120 Query: 108 TGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 TG + + P + +G D+S + + V VS + D +SDW Sbjct: 121 TGIWAMDAGEAYPAAEVIGTDLSP-----IQPSWVPPNVSFQIDDAESDW 165 >gi|212637715|ref|YP_002314240.1| putative SAM-dependent methyltransferase [Shewanella piezotolerans WP3] gi|212559199|gb|ACJ31653.1| Conserved hypothetical protein [Shewanella piezotolerans WP3] Length = 324 Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust. Identities = 31/101 (30%), Positives = 49/101 (48%), Gaps = 8/101 (7%) Query: 92 RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN-GVSERF 150 +I K D + +LD+GTG + L +S ++ VG D+ +LE A+ N G+S +F Sbjct: 96 KIPKGDKITVLDIGTGANVIYPLLGVQSYGWQFVGSDVDPASLENAQQIFAKNPGISGKF 155 Query: 151 DT-LQSDWFSSVEGL------FDVIVSNPPYIESVIVDCLG 184 LQ + G+ FDV + NPP+ S+ G Sbjct: 156 SCRLQGNTQHVFNGIINKDDRFDVTLCNPPFHASLAEASAG 196 >gi|126735895|ref|ZP_01751639.1| Predicted SAM-dependent methyltransferase [Roseobacter sp. CCS2] gi|126714452|gb|EBA11319.1| Predicted SAM-dependent methyltransferase [Roseobacter sp. CCS2] Length = 401 Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust. Identities = 22/53 (41%), Positives = 30/53 (56%), Gaps = 6/53 (11%) Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPP 173 VD S ALE+A + A GVS+RF T + D F + L FDV++ +PP Sbjct: 256 VDGSAPALELAATGASKMGVSDRFTTRKGDAFDVLAALAEEGETFDVVICDPP 308 >gi|238797913|ref|ZP_04641404.1| Ribosomal protein L11 methyltransferase [Yersinia mollaretii ATCC 43969] gi|238718218|gb|EEQ10043.1| Ribosomal protein L11 methyltransferase [Yersinia mollaretii ATCC 43969] Length = 296 Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust. Identities = 43/136 (31%), Positives = 66/136 (48%), Gaps = 20/136 (14%) Query: 87 AFSLPRIEKRDVV--RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN 144 A L ++ D+V ++D G G+G + +A LK +G+DI +A++ ++ NA N Sbjct: 146 ALCLQWLDGLDLVGKTVIDFGCGSGILAIAALKLG-AAHAIGIDIDPQAIQASRDNAQRN 204 Query: 145 GVSERFDT-LQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS---LDGGI 200 GVSER L D + + DV+V+N L +R+ P IS + GG Sbjct: 205 GVSERLALYLAKDQPADLSA--DVVVAN----------ILAGPLRELAPLISVLPVAGGH 252 Query: 201 DGLSH-YRTIADGVSR 215 GLS T A GV+ Sbjct: 253 LGLSGVLATQAAGVAE 268 >gi|332637903|ref|ZP_08416766.1| hypothetical protein WcibK1_04354 [Weissella cibaria KACC 11862] Length = 253 Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust. Identities = 28/91 (30%), Positives = 47/91 (51%), Gaps = 7/91 (7%) Query: 88 FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147 F+ PR R + +DLG G GAV L + + VGV+I + ++A + N ++ Sbjct: 40 FAQPRKNGRGLN--VDLGAGNGAVSL-FMAHKVAGQIVGVEIQERLADMATRSVQMNDLT 96 Query: 148 ERFDTLQSDW---FSSVE-GLFDVIVSNPPY 174 ++ + D F+ + G D++VSNPPY Sbjct: 97 DKITIINKDMRDIFTDIRPGSADMVVSNPPY 127 >gi|284048009|ref|YP_003398348.1| Methyltransferase type 11 [Acidaminococcus fermentans DSM 20731] gi|283952230|gb|ADB47033.1| Methyltransferase type 11 [Acidaminococcus fermentans DSM 20731] Length = 244 Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust. Identities = 28/97 (28%), Positives = 50/97 (51%), Gaps = 7/97 (7%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 D+ + P + ++ ++L+LG GTGAV L LL K +GVD++ +E+ + + Sbjct: 28 TDAVFLAAFPHLVRK--AKVLELGCGTGAVSL-LLANRGAEKVLGVDVNPHVVELFQRSI 84 Query: 142 VTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPY 174 N + +R + D +GL D++ +NPPY Sbjct: 85 RDNHLEDRVEGRVCDLRDFRDGLPCDALDLVAANPPY 121 >gi|222529538|ref|YP_002573420.1| 50S ribosomal protein L11 methyltransferase [Caldicellulosiruptor bescii DSM 6725] gi|254782825|sp|B9MJY9|PRMA_ANATD RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11 Mtase gi|222456385|gb|ACM60647.1| ribosomal protein L11 methyltransferase [Caldicellulosiruptor bescii DSM 6725] Length = 304 Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust. Identities = 34/107 (31%), Positives = 55/107 (51%), Gaps = 18/107 (16%) Query: 101 ILDLGTGTGAVCLALLKESPFF--KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 +LD+GTG+G + +A K F + + VDI A+++A+ NA NGV + ++D Sbjct: 172 VLDVGTGSGILAIAAKK---FLARRVLAVDIDEVAVKVAEENARLNGV--EIEIKKNDLV 226 Query: 159 SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDF-----DPRISLDGGI 200 +E FDV+V+N ++ D + RD D RI + GI Sbjct: 227 EGIEEKFDVVVAN------IVADIIMRLSRDVKKVLKDDRIFISSGI 267 >gi|254448299|ref|ZP_05061761.1| ribosomal RNA small subunit methyltransferase C [gamma proteobacterium HTCC5015] gi|198262166|gb|EDY86449.1| ribosomal RNA small subunit methyltransferase C [gamma proteobacterium HTCC5015] Length = 353 Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust. Identities = 34/104 (32%), Positives = 47/104 (45%), Gaps = 5/104 (4%) Query: 78 TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137 T +L+D+ S P K+D +LD G G + L L + VD+S AL A Sbjct: 195 TRVLLDNL--HSTPLSIKKDAP-LLDFAAGAGPIALWLKRRYADLNITLVDVSAIALFCA 251 Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181 NA N + Q+D V+G + IVSNPP+ V D Sbjct: 252 WMNAQVNDME--VVCQQADGLQGVDGEWQAIVSNPPFHTGVETD 293 >gi|89071135|ref|ZP_01158333.1| Cfa, cyclopropane-fatty-acyl-phospholipid synthase [Oceanicola granulosus HTCC2516] gi|89043320|gb|EAR49543.1| Cfa, cyclopropane-fatty-acyl-phospholipid synthase [Oceanicola granulosus HTCC2516] Length = 399 Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust. Identities = 29/99 (29%), Positives = 51/99 (51%), Gaps = 6/99 (6%) Query: 76 PETELLVDSALAFSLPRIEKRDVV----RILDLGTGTGAVCLALLKESPFFKGVGVDISC 131 PE ++ +++A I ++ ++ R+LD+G G G + L L ++ + VGV +S Sbjct: 149 PEPDMSLEAAQEAKKRHIARKLLIEPGDRVLDIGCGWGGMALTLARDFG-ARVVGVTLSE 207 Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170 + IA+ +S+R D D + VEG F+ IVS Sbjct: 208 EQHRIARERVAQAQLSDRIDIRLQD-YREVEGPFERIVS 245 >gi|117925507|ref|YP_866124.1| rRNA (guanine-N(2)-)-methyltransferase [Magnetococcus sp. MC-1] gi|229564333|sp|A0L9S5|RLMG_MAGSM RecName: Full=Ribosomal RNA large subunit methyltransferase G; AltName: Full=23S rRNA m2G1835 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rlmG gi|117609263|gb|ABK44718.1| 23S rRNA m(2)G-1835 methyltransferase / 16S rRNA m(2)G 1207 methyltransferase [Magnetococcus sp. MC-1] Length = 369 Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust. Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 1/76 (1%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 +++DLG G G + +A L+ +P + VD S +A + N E F + S Sbjct: 227 QVVDLGCGNGVLSIAALQRNPNSHVLAVDESWQATRSCQINLERVRTPEHFKVVWGHSLS 286 Query: 160 SVEGL-FDVIVSNPPY 174 +EG+ D+++ NPP+ Sbjct: 287 FIEGMQADLVLCNPPF 302 >gi|296532806|ref|ZP_06895483.1| probable ribosomal protein L11 methyltransferase [Roseomonas cervicalis ATCC 49957] gi|296266867|gb|EFH12815.1| probable ribosomal protein L11 methyltransferase [Roseomonas cervicalis ATCC 49957] Length = 304 Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust. Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 4/82 (4%) Query: 93 IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152 + R RILDLGTG+G + +A K K + DI ++ +A+ NA NG+ +F Sbjct: 151 MAHRRPKRILDLGTGSGILAMAAAKRL-HRKVLATDIEPWSVRVAQDNANMNGLRNQFRA 209 Query: 153 LQSDWF---SSVEGLFDVIVSN 171 +D + S G +D++ +N Sbjct: 210 KLADGWKHRSVRAGTYDLVFAN 231 >gi|291544856|emb|CBL17965.1| RNA methyltransferase, RsmD family [Ruminococcus sp. 18P13] Length = 180 Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust. Identities = 36/132 (27%), Positives = 61/132 (46%), Gaps = 18/132 (13%) Query: 75 RPETELLVD---SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131 RP T+ + + SA+ F LP ++LDL G+G + + L GV VD S Sbjct: 22 RPTTDKVKEAMFSAIQFQLPG------AQVLDLFAGSGQLGIEALSRGAA-HGVFVDQSS 74 Query: 132 KALEIAKSNAVTNG---VSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVR 188 +++ + + N T G VS Q D+ + + FD+ +PPY + ++ + L + Sbjct: 75 RSIAVVRENLETTGFTDVSAVVLKSQMDFLRTTDQRFDIAFLDPPYGKGILEETLPVLSE 134 Query: 189 DFDPRISLDGGI 200 +P GGI Sbjct: 135 YMNP-----GGI 141 >gi|281415516|ref|ZP_06247258.1| methyltransferase family protein [Micrococcus luteus NCTC 2665] Length = 558 Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust. Identities = 28/92 (30%), Positives = 43/92 (46%), Gaps = 12/92 (13%) Query: 94 EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG-------- 145 ++R V R LD+G G G L LL + D+S +AL + N + N Sbjct: 182 QRRPVARALDVGVGCGIQTLHLLAHADHV--TATDLSERALAFTRFNLLLNADVLGLDRE 239 Query: 146 -VSERFDTLQSDWFSSVEG-LFDVIVSNPPYI 175 + +R D + V G FD++VSNPP++ Sbjct: 240 RLEDRVRLAAGDLLAPVAGERFDLVVSNPPFV 271 >gi|254823031|ref|ZP_05228032.1| hypothetical protein MintA_24089 [Mycobacterium intracellulare ATCC 13950] Length = 249 Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust. Identities = 29/82 (35%), Positives = 42/82 (51%), Gaps = 15/82 (18%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDI-----SCKALEIAKSNAVTNGVSERFDTLQS 155 +LDLG G GAV LA K P + +GVD+ + + + +NAV GV++R + + Sbjct: 93 VLDLGCGRGAVLLAAAKRLPRGRAIGVDLWQADQTDNSRQATLANAVAEGVADRVEVRTA 152 Query: 156 DWFSSVEGL------FDVIVSN 171 D V L DV+VSN Sbjct: 153 D----VTALPLADESVDVVVSN 170 >gi|206890120|ref|YP_002248963.1| methyltransferase small domain family [Thermodesulfovibrio yellowstonii DSM 11347] gi|206742058|gb|ACI21115.1| methyltransferase small domain family [Thermodesulfovibrio yellowstonii DSM 11347] Length = 386 Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust. Identities = 27/78 (34%), Positives = 39/78 (50%), Gaps = 8/78 (10%) Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD----- 156 LDL GA + L K G+D S KA+EIAK NA+ N V ++ +++D Sbjct: 217 LDLFCYVGAWSIHLAKRGANI--TGIDSSEKAIEIAKQNAMLNNVQDKCRFIKADVFDYL 274 Query: 157 -WFSSVEGLFDVIVSNPP 173 W + +D IV +PP Sbjct: 275 RWEAKKGKKYDFIVVDPP 292 >gi|163844183|ref|YP_001628588.1| methyltransferase small [Brucella suis ATCC 23445] gi|163674906|gb|ABY39017.1| methyltransferase small [Brucella suis ATCC 23445] Length = 340 Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust. Identities = 30/114 (26%), Positives = 50/114 (43%), Gaps = 8/114 (7%) Query: 73 EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV-DISC 131 EP + +D A +EK + DLG G G + LK + K + + + Sbjct: 172 EPGMFSHGAIDKGSALLARHMEKIVFGNVADLGAGWGYLAAQCLKYADRIKNIDLYEADY 231 Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWF----SSVEGLFDVIVSNPPYIESVIVD 181 +ALE A+ N G S + +WF + G++D ++ NPP+ E + D Sbjct: 232 EALEAARGNLERLGAS---IPISFNWFDVTSEKIAGIYDTVIMNPPFYEGRVTD 282 >gi|300817648|ref|ZP_07097863.1| conserved hypothetical protein [Escherichia coli MS 107-1] gi|300927048|ref|ZP_07142800.1| hypothetical protein HMPREF9548_05033 [Escherichia coli MS 182-1] gi|301330323|ref|ZP_07222970.1| conserved hypothetical protein [Escherichia coli MS 78-1] gi|309794371|ref|ZP_07688794.1| conserved hypothetical protein [Escherichia coli MS 145-7] gi|300416932|gb|EFK00243.1| hypothetical protein HMPREF9548_05033 [Escherichia coli MS 182-1] gi|300529636|gb|EFK50698.1| conserved hypothetical protein [Escherichia coli MS 107-1] gi|300843657|gb|EFK71417.1| conserved hypothetical protein [Escherichia coli MS 78-1] gi|308121827|gb|EFO59089.1| conserved hypothetical protein [Escherichia coli MS 145-7] Length = 219 Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust. Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 5/89 (5%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 V R LD+G G+G + L L + + + V++ +A A+ N + +ER + +D Sbjct: 19 VKRCLDIGAGSGLLALMLAQRTDDSVIIDAVELESEAAAQAQENINQSPWAERINVHTAD 78 Query: 157 ---WFSSVEGLFDVIVSNPPYIESVIVDC 182 W + FD+I+SNPPY + V+C Sbjct: 79 IQQWITQQTVRFDLIISNPPYYQQG-VEC 106 >gi|282865460|ref|ZP_06274511.1| Trans-aconitate 2-methyltransferase [Streptomyces sp. ACTE] gi|282559504|gb|EFB65055.1| Trans-aconitate 2-methyltransferase [Streptomyces sp. ACTE] Length = 264 Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust. Identities = 42/140 (30%), Positives = 57/140 (40%), Gaps = 21/140 (15%) Query: 95 KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154 R RI DLG G G V L + P + G D S + LE A+++A R D + Sbjct: 33 PRPTPRIADLGCGAGNVTALLAADRPEARVTGYDNSTRMLEQARTHA-----GPRLDFAE 87 Query: 155 SD---WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI-------SLDGGIDGLS 204 +D W E +D+IVSN + + GL R D + + G D S Sbjct: 88 ADVATW--EPEETYDLIVSN--ALLQWVPGHTGLFPRWLDALVPGGVLAFQVPGNFDAPS 143 Query: 205 H--YRTIADGVSRHLNKDGL 222 H R +AD H GL Sbjct: 144 HTLLRELADSPRWHGTLGGL 163 >gi|157273446|gb|ABV27345.1| putative methyltransferase [Candidatus Chloracidobacterium thermophilum] Length = 183 Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust. Identities = 32/117 (27%), Positives = 51/117 (43%), Gaps = 10/117 (8%) Query: 75 RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134 RP ++ + ++ PRI + LDL G+GAV + L + V+ S +AL Sbjct: 22 RPTSDRMRETLFNILAPRISDKA---FLDLCAGSGAVGIEALSRGAA-RATFVERSRRAL 77 Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPPYIESVIVDCLGL 185 N G+ E + +Q D S+++ FD I +PPY S+ L L Sbjct: 78 MALVENLARCGIGEEAEVIQRDAISAIKQFVQAGRRFDFIFCDPPYASSLYEPLLAL 134 >gi|115378992|ref|ZP_01466123.1| methyltransferase [Stigmatella aurantiaca DW4/3-1] gi|115363996|gb|EAU63100.1| methyltransferase [Stigmatella aurantiaca DW4/3-1] Length = 228 Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust. Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 4/79 (5%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R++DLGTG+G + L L K + G+++ + +A+ N N ++ +Q D Sbjct: 31 RLIDLGTGSGIIPLVLAKRLGLREVTGLELQPRLYSLAERNVYLNRCEQQVTLVQGDLRQ 90 Query: 160 S----VEGLFDVIVSNPPY 174 G F ++ NPPY Sbjct: 91 VSRLFAAGSFCHVLCNPPY 109 >gi|307129032|ref|YP_003881048.1| methylase for 50S ribosomal subunit protein L11 [Dickeya dadantii 3937] gi|306526561|gb|ADM96491.1| methylase for 50S ribosomal subunit protein L11 [Dickeya dadantii 3937] Length = 295 Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust. Identities = 19/51 (37%), Positives = 32/51 (62%), Gaps = 1/51 (1%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151 ++D G G+G + +A LK +G+DI +A++ ++ NA NGVSER + Sbjct: 162 VIDFGCGSGILAIAALKLG-AAHAIGIDIDPQAIQASRDNAQRNGVSERLE 211 >gi|300361859|ref|ZP_07058036.1| ribosomal protein L11 methyltransferase [Lactobacillus gasseri JV-V03] gi|300354478|gb|EFJ70349.1| ribosomal protein L11 methyltransferase [Lactobacillus gasseri JV-V03] Length = 315 Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust. Identities = 27/102 (26%), Positives = 54/102 (52%), Gaps = 8/102 (7%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 + +LD+GTG+G + +A K + +G DIS +A+ AK N N + + D +++ Sbjct: 179 MSVLDVGTGSGILAIAASKLGA-SQVLGTDISDEAVTAAKENIALNNI-DNIDVRKANLL 236 Query: 159 SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200 ++ +D+IV+N ++ D L + D D ++ +G + Sbjct: 237 KDIDEKYDLIVAN------ILADILLELIPDLDSHLNENGKV 272 >gi|75910114|ref|YP_324410.1| hypothetical protein Ava_3910 [Anabaena variabilis ATCC 29413] gi|75703839|gb|ABA23515.1| conserved hypothetical protein [Anabaena variabilis ATCC 29413] Length = 219 Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust. Identities = 26/85 (30%), Positives = 47/85 (55%), Gaps = 5/85 (5%) Query: 76 PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135 P +++VD+ L + ++ K DV + DLG+G G + ++ +G G+DI+ + ++ Sbjct: 68 PTPQVVVDAMLQVA--QVGKNDV--LYDLGSGDGRIVNTAAQKF-GTRGTGIDINPERIQ 122 Query: 136 IAKSNAVTNGVSERFDTLQSDWFSS 160 A NA GVS+R +Q D F + Sbjct: 123 EANENAQKAGVSDRVKFVQQDLFKT 147 >gi|170017258|ref|YP_001728177.1| Type I restriction-modification system, M subunit [Leuconostoc citreum KM20] gi|169804115|gb|ACA82733.1| Type I restriction-modification system, M subunit [Leuconostoc citreum KM20] Length = 531 Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust. Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 9/90 (10%) Query: 94 EKRDVVRILDLGTGTGAVCLALLKESPFFKGV---GVDISCKALEIAKSNAVTNGVSE-- 148 E R I D G+G++ L + + K V G +++ +A+ N + +GV + Sbjct: 213 EDRAPFHIYDPTMGSGSLMLNIRRYLSNPKQVHYHGQELNTTTYNLARMNLILHGVDQDR 272 Query: 149 ----RFDTLQSDWFSSVEGLFDVIVSNPPY 174 DTL +DW + FD +V NPPY Sbjct: 273 MNLNNGDTLDADWPTEEPHQFDAVVMNPPY 302 >gi|197119799|ref|YP_002140226.1| O-methyltransferase [Geobacter bemidjiensis Bem] gi|197089159|gb|ACH40430.1| O-methyltransferase, putative [Geobacter bemidjiensis Bem] Length = 258 Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust. Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 4/79 (5%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R +DLGTG G + L L + ++ +IA N + NG+S+R + ++ D S Sbjct: 57 RCVDLGTGCGVIALLLARLGENASVAAIEFQQVMAQIAARNVMMNGLSDRVEVVEEDVVS 116 Query: 160 SVEGL----FDVIVSNPPY 174 FD++VSNPPY Sbjct: 117 VKSRFLVDSFDLVVSNPPY 135 >gi|37681321|ref|NP_935930.1| ribosomal protein L11 methyltransferase [Vibrio vulnificus YJ016] gi|38605128|sp|P60094|PRMA_VIBVY RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11 Mtase gi|37200072|dbj|BAC95901.1| ribosomal protein L11 methylase [Vibrio vulnificus YJ016] Length = 295 Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust. Identities = 28/73 (38%), Positives = 43/73 (58%), Gaps = 6/73 (8%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159 ++D G G+G + +A +K K +G+DI +AL +K NA NGV+++ D L D Sbjct: 163 VIDFGCGSGILAIAAIKLG-AEKVIGIDIDPQALLASKDNAQRNGVADQLDVYLPQD--- 218 Query: 160 SVEGLF-DVIVSN 171 EGL DV+V+N Sbjct: 219 QPEGLLADVVVAN 231 >gi|225554311|gb|EEH02611.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR] Length = 500 Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust. Identities = 52/218 (23%), Positives = 80/218 (36%), Gaps = 59/218 (27%) Query: 38 LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETE--------LLVDSALAFS 89 L + R + + ILG + F + + PRPETE LL+ Sbjct: 88 LREMVRRRARGVPLQYILGDQPFGELEMLCRRGVLIPRPETESYTTRVANLLLSKLAPTR 147 Query: 90 LPRIEKRD--------VVRILDLGTGTGAVCLALLKES----PFFKGVGVDISCKALEIA 137 + RD +RI+DL TGTG + L L P + GVDIS +AL++A Sbjct: 148 RKGLAHRDECKCEHLPTLRIVDLCTGTGCIPLLLHSLLSPVFPKLQICGVDISARALKLA 207 Query: 138 KSN-----------------------AVTNGVSERFDTLQSDWFSS-------------- 160 + N V +G SE + S S Sbjct: 208 RENLKHNIALGMLSERAREEVSFVKGNVLSGQSELSELYTSSVTPSSKTAAAAAAAAEPE 267 Query: 161 VEGLFDVIVSNPPYIESV--IVDCLGLEVRDFDPRISL 196 + + +++SNPPYI VR ++P+++L Sbjct: 268 INPVITILLSNPPYISPAQFANGTTARSVRRYEPKLAL 305 >gi|14521889|ref|NP_127366.1| hypothetical protein PAB1237 [Pyrococcus abyssi GE5] gi|5459109|emb|CAB50595.1| Hypothetical protein, Met-10+ like protein [Pyrococcus abyssi GE5] Length = 396 Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust. Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 11/82 (13%) Query: 100 RILDLGTGTG--AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 R+LD+ T TG A+ A+ + +D S +A+E AK NA NGV ++ + Sbjct: 220 RVLDVFTYTGGFAIHAAIAGADEV---IAIDKSPRAIETAKENAKLNGVEDKIKFIVGSA 276 Query: 158 FSSVEGL------FDVIVSNPP 173 F +E L FDV++ +PP Sbjct: 277 FEEMEKLQKKGEKFDVVILDPP 298 >gi|325688191|gb|EGD30210.1| ribosomal RNA small subunit methyltransferase D [Streptococcus sanguinis SK72] Length = 182 Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust. Identities = 35/131 (26%), Positives = 60/131 (45%), Gaps = 16/131 (12%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+LDL G+G++ + + + V V+ +A I N ERFD L+ + Sbjct: 47 RVLDLYAGSGSLAIEAISRG-MEEAVLVERDRRAQAIISENIQMTKEPERFDLLKMESGR 105 Query: 160 SVE---GLFDVIVSNPPYI-ESVIVDCLGLE-----------VRDFDPRISLDGGIDGLS 204 ++E G FD+++ +PPY E ++ D LE V + D + L I GL Sbjct: 106 ALEILTGAFDLVLLDPPYAKEQIVADLEKLEESRLLSQDVLVVCETDKEVELPEEIAGLG 165 Query: 205 HYRTIADGVSR 215 ++ G+S+ Sbjct: 166 IWKQKIYGISK 176 >gi|322834711|ref|YP_004214738.1| ribosomal protein L11 methyltransferase [Rahnella sp. Y9602] gi|321169912|gb|ADW75611.1| ribosomal protein L11 methyltransferase [Rahnella sp. Y9602] Length = 294 Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust. Identities = 41/138 (29%), Positives = 62/138 (44%), Gaps = 28/138 (20%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL----QSD 156 ++D G G+G + +A LK VG+DI +A++ ++ NA NGVSER Q D Sbjct: 162 VIDFGCGSGILAIAALKLGAKHV-VGIDIDPQAIQASRDNAERNGVSERLSLYLPKDQPD 220 Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS---LDGGIDGL-----SHYRT 208 S+ DV+V+N L +R+ P IS + GG GL S ++ Sbjct: 221 NLSA-----DVVVAN----------ILAGPLRELAPLISVLPVAGGHLGLSGVLASQAQS 265 Query: 209 IADGVSRHLNKDGLCSVE 226 +AD D + E Sbjct: 266 VADAYKDQFELDPVAEKE 283 >gi|319782824|ref|YP_004142300.1| methyltransferase type 11 [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317168712|gb|ADV12250.1| Methyltransferase type 11 [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 340 Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust. Identities = 25/62 (40%), Positives = 36/62 (58%), Gaps = 4/62 (6%) Query: 87 AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK-GVGVDISCKALEIAKSNAVTNG 145 A L + KR +LDLGTGTG + SP ++ GVG+D+S + L +A++N G Sbjct: 142 AAMLKLVGKRPFQSMLDLGTGTGRLLEIF---SPLYRRGVGIDMSREMLTVARANLDKAG 198 Query: 146 VS 147 VS Sbjct: 199 VS 200 >gi|291533323|emb|CBL06436.1| RNA methyltransferase, RsmD family [Megamonas hypermegale ART12/1] Length = 190 Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust. Identities = 29/106 (27%), Positives = 55/106 (51%), Gaps = 9/106 (8%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LDL +GTG + L L + VD S ++ K NA + ++ L++D F++ Sbjct: 45 VLDLFSGTGNLSLEALSRGANH-AIMVDCSLDSISTIKFNATHTKLIDKSTILKADVFAT 103 Query: 161 VEGL------FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200 ++ L FD+I +PPY + + + L + + ++ P ++ DG I Sbjct: 104 IKKLHLKQTKFDIIFCDPPYHQDLCLKVLQM-LHEY-PLLTEDGII 147 >gi|226365309|ref|YP_002783092.1| hypothetical protein ROP_59000 [Rhodococcus opacus B4] gi|226243799|dbj|BAH54147.1| hypothetical protein [Rhodococcus opacus B4] Length = 380 Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust. Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 2/86 (2%) Query: 90 LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 LPR+ R + DLG GTG + ++L + P + D S A+ A + A NG+ R Sbjct: 231 LPRVNPRARAAV-DLGCGTGILAVSLARLLPEVSVIATDQSSAAVASAAATARANGLDGR 289 Query: 150 FDTLQSDWFSSVEG-LFDVIVSNPPY 174 TL+ D SS+ DV++ NPP+ Sbjct: 290 ISTLRDDAMSSLATDSQDVVLCNPPF 315 >gi|126654237|ref|ZP_01726031.1| hypothetical protein BB14905_22023 [Bacillus sp. B14905] gi|126589295|gb|EAZ83452.1| hypothetical protein BB14905_22023 [Bacillus sp. B14905] Length = 200 Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust. Identities = 30/98 (30%), Positives = 52/98 (53%), Gaps = 10/98 (10%) Query: 78 TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137 + +L+D AF +P I+ I D+G G G + L++ K +P +DI+ +A+ ++ Sbjct: 46 SRVLID---AFQMPNIDGA----IFDIGCGYGPIGLSIAKANPDRTVCMMDINERAVALS 98 Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFD--VIVSNPP 173 + NA NGV + SD S V+ + I++NPP Sbjct: 99 QKNAQVNGV-QNVRIFVSDGLSMVDKDIEAAAILTNPP 135 >gi|85705712|ref|ZP_01036809.1| hypothetical protein ROS217_10442 [Roseovarius sp. 217] gi|85669702|gb|EAQ24566.1| hypothetical protein ROS217_10442 [Roseovarius sp. 217] Length = 257 Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust. Identities = 29/95 (30%), Positives = 44/95 (46%), Gaps = 9/95 (9%) Query: 86 LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145 LA S+P R +LDLG G+G L + P G++I +A+ N+ TNG Sbjct: 39 LAASVP---ARAGQTLLDLGCGSGIAALCVAARVPGVSLAGLEIQPAYAVLARRNSATNG 95 Query: 146 VSERFDTLQSDWFSSVEGL----FDVIVSNPPYIE 176 ++ D + D L FD ++ NPPY + Sbjct: 96 LA--LDVTEGDIADLPAELRARQFDHVIVNPPYFD 128 >gi|300901471|ref|ZP_07119554.1| methyltransferase small domain protein [Escherichia coli MS 198-1] gi|300355109|gb|EFJ70979.1| methyltransferase small domain protein [Escherichia coli MS 198-1] Length = 376 Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust. Identities = 27/78 (34%), Positives = 43/78 (55%), Gaps = 3/78 (3%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS--ERFDTLQSDW 157 I+DLG G G + L LL ++P K V VD S A+ ++ N TN +R + + ++ Sbjct: 267 EIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNA 326 Query: 158 FSSVEGL-FDVIVSNPPY 174 S VE F+ ++ NPP+ Sbjct: 327 LSGVEPFRFNAVLCNPPF 344 >gi|288930622|ref|YP_003434682.1| methyltransferase type 11 [Ferroglobus placidus DSM 10642] gi|288892870|gb|ADC64407.1| Methyltransferase type 11 [Ferroglobus placidus DSM 10642] Length = 246 Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust. Identities = 26/52 (50%), Positives = 33/52 (63%), Gaps = 6/52 (11%) Query: 97 DVVRILDLGTGTG--AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146 D +RILD+GTGTG AV LA L VG+DIS + L++A+ AV GV Sbjct: 42 DKMRILDVGTGTGFLAVILAELGHEV----VGIDISEEMLKVARRKAVDKGV 89 >gi|223939007|ref|ZP_03630892.1| methyltransferase small [bacterium Ellin514] gi|223892303|gb|EEF58779.1| methyltransferase small [bacterium Ellin514] Length = 288 Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust. Identities = 33/131 (25%), Positives = 63/131 (48%), Gaps = 15/131 (11%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 + LDLG+G G+V + P + V ++ +++ +A+ +A NG+ R++ D+ Sbjct: 78 ACKALDLGSGIGSVGMIAAWRLPGAQFVTIEAQDESVRLARKSARFNGLEARYEIRHGDF 137 Query: 158 FSSV----EGLFDVIVSNPPYIESVIVDCLGLEVR-DFDPRISLDGGIDG-LSHYRTIAD 211 + LFD+++ +PPY LG + D +I+ + G +SHY +A Sbjct: 138 RDPNILRDDELFDLVLGSPPYFP------LGSGIEGDHPQKIACRFEVRGDISHYCAMA- 190 Query: 212 GVSRHLNKDGL 222 ++HL G Sbjct: 191 --TKHLAPGGF 199 >gi|182435368|ref|YP_001823087.1| hypothetical protein SGR_1575 [Streptomyces griseus subsp. griseus NBRC 13350] gi|178463884|dbj|BAG18404.1| conserved hypothetical protein [Streptomyces griseus subsp. griseus NBRC 13350] Length = 497 Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust. Identities = 22/50 (44%), Positives = 30/50 (60%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 R+LDLG G G + LLK+ F + VGVD+S +AL IA + + ER Sbjct: 301 RVLDLGCGQGQLVQELLKDVRFTEIVGVDVSMRALTIASRRLKLDRMGER 350 >gi|92118256|ref|YP_577985.1| ribosomal L11 methyltransferase [Nitrobacter hamburgensis X14] gi|91801150|gb|ABE63525.1| [LSU ribosomal protein L11P]-lysine N-methyltransferase [Nitrobacter hamburgensis X14] Length = 298 Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust. Identities = 31/97 (31%), Positives = 49/97 (50%), Gaps = 14/97 (14%) Query: 80 LLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAK 138 LL+D L +PR R+LDLG GTG + +A K + V DI ++ +A+ Sbjct: 146 LLLDHVLRSKMPR-------RVLDLGAGTGVLAIAAAKA--LRRNVLASDIDPRSTIVAR 196 Query: 139 SNAVTNGVSERFDTLQSDWFSS----VEGLFDVIVSN 171 NAV NGV ++ + FS+ FD++++N Sbjct: 197 ENAVLNGVGNLVWSICATGFSAPLFRARAPFDLVLAN 233 >gi|75907816|ref|YP_322112.1| hypothetical protein Ava_1594 [Anabaena variabilis ATCC 29413] gi|75701541|gb|ABA21217.1| conserved hypothetical protein [Anabaena variabilis ATCC 29413] Length = 461 Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust. Identities = 19/46 (41%), Positives = 32/46 (69%) Query: 93 IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAK 138 +++ + R++DLG G G + LLK+S F + GVD+S ++LEIA+ Sbjct: 276 LKQSNARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQ 321 >gi|323979005|gb|EGB74084.1| methyltransferase small domain-containing protein [Escherichia coli TW10509] Length = 378 Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust. Identities = 26/77 (33%), Positives = 43/77 (55%), Gaps = 3/77 (3%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS--ERFDTLQSDWF 158 ++DLG G G + L LL ++P K V VD S A+ ++ N TN +R + + ++ Sbjct: 232 VVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNAL 291 Query: 159 SSVEGL-FDVIVSNPPY 174 S VE F+ ++ NPP+ Sbjct: 292 SGVEPFRFNAVLCNPPF 308 >gi|291531341|emb|CBK96926.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Eubacterium siraeum 70/3] Length = 449 Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust. Identities = 32/104 (30%), Positives = 54/104 (51%), Gaps = 14/104 (13%) Query: 76 PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135 P E L SA F+ P+ + +LDL G G + L++ + + K +GV+I +A+E Sbjct: 285 PCAEQLYSSACDFAEPKGKT-----VLDLYCGAGTIGLSMARTAK--KIIGVEIVPEAIE 337 Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEGLF------DVIVSNPP 173 AK NA+ NG++ + + +D + L DVI+ +PP Sbjct: 338 NAKQNALANGITN-CEFICADAAEAARILHSRNLRPDVIMVDPP 380 >gi|254413900|ref|ZP_05027669.1| methyltransferase, UbiE/COQ5 family [Microcoleus chthonoplastes PCC 7420] gi|196179497|gb|EDX74492.1| methyltransferase, UbiE/COQ5 family [Microcoleus chthonoplastes PCC 7420] Length = 292 Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust. Identities = 26/87 (29%), Positives = 45/87 (51%), Gaps = 6/87 (6%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 RILDLG GTG+ L L + P + +G+D+S L +A+ A GV ++ +++ Sbjct: 103 RILDLGCGTGSTTLLLKQAFPEAEVIGLDLSPYMLVMAERKAKAAGVEIQWRHGKAEETG 162 Query: 160 SVEGLFDVIVSN------PPYIESVIV 180 E FD++ ++ PP + I+ Sbjct: 163 LPEASFDLVTASLLFHETPPAVAKSIL 189 >gi|109896410|ref|YP_659665.1| rRNA (guanine-N(2)-)-methyltransferase [Pseudoalteromonas atlantica T6c] gi|123361452|sp|Q15ZS7|RSMC_PSEA6 RecName: Full=Ribosomal RNA small subunit methyltransferase C; AltName: Full=16S rRNA m2G1207 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rsmC gi|109698691|gb|ABG38611.1| 16S rRNA m(2)G 1207 methyltransferase [Pseudoalteromonas atlantica T6c] Length = 343 Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust. Identities = 29/101 (28%), Positives = 50/101 (49%), Gaps = 4/101 (3%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAV-CLALLKESPFFKGVGVDISCKALEIAKSN 140 +D+ L I++ RILD G G + C A LK +P + V D+S A+ ++ + Sbjct: 188 LDTGTQLLLDNIDRVVSGRILDFACGAGIIGCFAGLK-NPQAQVVMSDVSALAIYCSQKS 246 Query: 141 AVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181 A NGV + + S+ ++ G F + +NPP+ + D Sbjct: 247 AELNGVKAQ--VIPSNGLGALTGKFAQVFTNPPFHTGIKTD 285 >gi|310657890|ref|YP_003935611.1| hypothetical protein CLOST_0580 [Clostridium sticklandii DSM 519] gi|308824668|emb|CBH20706.1| conserved protein of unknown function [Clostridium sticklandii] Length = 570 Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust. Identities = 39/146 (26%), Positives = 67/146 (45%), Gaps = 20/146 (13%) Query: 97 DVVRILDLGTGTGAVCLALL-----------KESPFFKG--VGVDISCKALEIAKSNAVT 143 + +ILD G + +AL K S F K +G+DI A+E+AK N Sbjct: 32 EAAKILDPCIGGASFDIALFQALEQEYIKSYKLSEFLKTNFIGIDIEASAIELAKENLKK 91 Query: 144 NGVS--ERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFD-PRISLDGG 199 G+S + + D+ + E FD+I+ NPPYI + +VRD + + + G Sbjct: 92 VGISYADNLNLKCKDYLTDFNEQGFDLIIGNPPYIGEKGNRAVFSKVRDTEFGKKYYEKG 151 Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSV 225 +D ++ + LN+DG+ ++ Sbjct: 152 MD---YFYFFIEKSLEILNEDGILAM 174 >gi|297562502|ref|YP_003681476.1| methyltransferase type 11 [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296846950|gb|ADH68970.1| Methyltransferase type 11 [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 259 Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust. Identities = 38/129 (29%), Positives = 55/129 (42%), Gaps = 9/129 (6%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS---ERFDTLQS 155 +R+LDLG GTGA ALL+ P + VD S LE A++ VS R + L Sbjct: 54 LRLLDLGCGTGASTAALLRALPRARIAAVDASPGMLEAARAKRWPESVSFHRARAEDLTP 113 Query: 156 DWF-SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214 +W V G D + + +I +C + R L G + H ++AD VS Sbjct: 114 EWARRHVGGPVDAV-----FGAYLIRNCPDPDALLASVRALLKPGGRVVLHEYSVADSVS 168 Query: 215 RHLNKDGLC 223 +C Sbjct: 169 AQAVWSAVC 177 >gi|167750197|ref|ZP_02422324.1| hypothetical protein EUBSIR_01171 [Eubacterium siraeum DSM 15702] gi|167656759|gb|EDS00889.1| hypothetical protein EUBSIR_01171 [Eubacterium siraeum DSM 15702] Length = 493 Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust. Identities = 32/104 (30%), Positives = 54/104 (51%), Gaps = 14/104 (13%) Query: 76 PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135 P E L SA F+ P+ + +LDL G G + L++ + + K +GV+I +A+E Sbjct: 285 PCAEQLYSSACDFAEPKGKT-----VLDLYCGAGTIGLSMARTAK--KIIGVEIVPEAIE 337 Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEGLF------DVIVSNPP 173 AK NA+ NG++ + + +D + L DVI+ +PP Sbjct: 338 NAKQNALANGIT-NCEFICADAAEAARILHSRNLRPDVIMVDPP 380 >gi|119498171|ref|XP_001265843.1| S-adenosylmethionine-dependent methyltransferase, putative [Neosartorya fischeri NRRL 181] gi|119414007|gb|EAW23946.1| S-adenosylmethionine-dependent methyltransferase, putative [Neosartorya fischeri NRRL 181] Length = 357 Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust. Identities = 23/47 (48%), Positives = 34/47 (72%), Gaps = 3/47 (6%) Query: 94 EKRDVVRILDLGTGTGAVCLALLKESPFFKG--VGVDISCKALEIAK 138 E+R ILDLGTG G++ LALL++ F+G VGVD S +++E+A+ Sbjct: 117 ERRRQPSILDLGTGNGSM-LALLRKRGGFRGVMVGVDYSARSVELAR 162 >gi|289582957|ref|YP_003481423.1| methyltransferase type 11 [Natrialba magadii ATCC 43099] gi|289532510|gb|ADD06861.1| Methyltransferase type 11 [Natrialba magadii ATCC 43099] Length = 209 Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust. Identities = 22/47 (46%), Positives = 29/47 (61%), Gaps = 2/47 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147 +LDLGTGTGA+ LAL ++ + VG DIS +E A S A G+ Sbjct: 46 VLDLGTGTGAIALALAPDAE--RVVGRDISEGMMEEAASKAADQGIE 90 >gi|56418563|ref|YP_145881.1| hypothetical protein GK0028 [Geobacillus kaustophilus HTA426] gi|56378405|dbj|BAD74313.1| hypothetical conserved protein [Geobacillus kaustophilus HTA426] Length = 248 Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust. Identities = 25/90 (27%), Positives = 48/90 (53%), Gaps = 9/90 (10%) Query: 100 RILDLGTGTGAVCLALLKESPFFKG--VGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 +I+DL TG G + L L + + KG +G++I + ++A+ + NG+ + + + D Sbjct: 47 QIVDLCTGNGVIPLLLSRRT---KGTIIGIEIQERLCDMARRSVQYNGLEGQIEIIHGDI 103 Query: 158 FSSVEGL----FDVIVSNPPYIESVIVDCL 183 + + + +DV+ NPPY +V D L Sbjct: 104 KEAPQRIGYSRYDVVTCNPPYFPAVGKDEL 133 >gi|260060773|ref|YP_003193853.1| putative RNA methyltransferase [Robiginitalea biformata HTCC2501] gi|88784903|gb|EAR16072.1| putative RNA methyltransferase [Robiginitalea biformata HTCC2501] Length = 237 Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust. Identities = 33/152 (21%), Positives = 65/152 (42%), Gaps = 18/152 (11%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW-- 157 ++LD+G+G G + L L + P V++ A N + ++R W Sbjct: 40 QLLDVGSGNGLLGLMLAQRCPSGDIEAVEVDPGAYVCCVENFEASPWADRLFCYHCSWEE 99 Query: 158 -FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDP---RISLDGGIDGLSHYRTIADGV 213 + G +D+I+SNPP+ +V +P R + + + ++ +GV Sbjct: 100 FVAESAGPYDMIISNPPFHPE--------QVSSHEPARERARREASLP----FNSLLEGV 147 Query: 214 SRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245 R L + GL SV + + + D ++ + L+ Sbjct: 148 DRLLAEQGLFSVVVPFASEADFTKLAAALGLY 179 >gi|332706038|ref|ZP_08426110.1| methylase involved in ubiquinone/menaquinone biosynthesis [Lyngbya majuscula 3L] gi|332355130|gb|EGJ34598.1| methylase involved in ubiquinone/menaquinone biosynthesis [Lyngbya majuscula 3L] Length = 111 Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust. Identities = 21/50 (42%), Positives = 28/50 (56%) Query: 90 LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKS 139 L IE + +LDLG GTG + L +E P +G GVD+S K L A+ Sbjct: 37 LEYIELTNQPNVLDLGCGTGRLLNRLAQEFPNLRGTGVDLSTKMLAQARQ 86 >gi|322392309|ref|ZP_08065770.1| type I restriction-modification system DNA-methyltransferase [Streptococcus peroris ATCC 700780] gi|321144844|gb|EFX40244.1| type I restriction-modification system DNA-methyltransferase [Streptococcus peroris ATCC 700780] Length = 533 Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust. Identities = 32/112 (28%), Positives = 54/112 (48%), Gaps = 13/112 (11%) Query: 72 FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV---GVD 128 + P+P +L+ + +AF L R E ++ I D G+G++ L K S + V G + Sbjct: 199 YTPQPVAKLM--TQIAF-LGR-ENQEGFTIYDATMGSGSLLLNAKKYSHKPQTVVYFGQE 254 Query: 129 ISCKALEIAKSNAVTNGVS------ERFDTLQSDWFSSVEGLFDVIVSNPPY 174 ++ +A+ N + +GV DTL DW + FD ++ NPPY Sbjct: 255 LNTSTYNLARMNMILHGVPVENQFLHNADTLDEDWPTQEPTNFDGVLMNPPY 306 >gi|311900508|dbj|BAJ32916.1| putative methyltransferase [Kitasatospora setae KM-6054] Length = 300 Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust. Identities = 31/83 (37%), Positives = 43/83 (51%), Gaps = 6/83 (7%) Query: 77 ETELLVD--SALAFSLP-RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133 + E+L D +A+ + LP E R V LDLG GTGA ALL P + VD S Sbjct: 44 DAEVLADHLAAIIYWLPLDAEPRHV---LDLGAGTGAGTFALLHRFPTARVTAVDASPGH 100 Query: 134 LEIAKSNAVTNGVSERFDTLQSD 156 L + A G+++R T+Q+D Sbjct: 101 LLRLREKAHALGLADRVATVQAD 123 >gi|312902060|ref|ZP_07761321.1| type I restriction-modification system, M subunit [Enterococcus faecalis TX0470] gi|311290842|gb|EFQ69398.1| type I restriction-modification system, M subunit [Enterococcus faecalis TX0470] Length = 529 Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust. Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 9/90 (10%) Query: 94 EKRDVVRILDLGTGTGAVCLALLKESPFFKGV---GVDISCKALEIAKSNAVTNGVSER- 149 E + + + D G+G++ L + + K V G +++ +AK N + +GV Sbjct: 215 EDKKLFSVFDPTMGSGSLMLNVRNYLNYPKSVKYHGQELNTTTYNLAKMNLILHGVEAED 274 Query: 150 -----FDTLQSDWFSSVEGLFDVIVSNPPY 174 DTL DW + FD +V NPPY Sbjct: 275 MNLRNGDTLNKDWPTDEPYTFDSVVMNPPY 304 >gi|311031619|ref|ZP_07709709.1| ribosomal protein L11 methyltransferase [Bacillus sp. m3-13] Length = 313 Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust. Identities = 35/139 (25%), Positives = 63/139 (45%), Gaps = 26/139 (18%) Query: 56 GWRDFYN-------VRLTLSSDTFEPRPETELLV--DSALAFS----------LPRIEK- 95 W+ +YN + + +T+EP E ++ D +AF + IE+ Sbjct: 113 AWKKYYNPVKISEKFTIVPTWETYEPVSSDEKIIELDPGMAFGTGTHPTTVLCIQAIERT 172 Query: 96 -RDVVRILDLGTGTG--AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152 + +++D+GTG+G ++ A+L +D+ A+E AK N N V Sbjct: 173 VKPQDKVIDVGTGSGVLSIAAAMLDAKEVL---ALDLDDVAVESAKLNIKLNKVHPTVTV 229 Query: 153 LQSDWFSSVEGLFDVIVSN 171 Q++ +VEG DV+V+N Sbjct: 230 KQNNLLKNVEGPVDVVVAN 248 >gi|310821604|ref|YP_003953962.1| ubiquinone/menaquinone biosynthesis methyltransferase [Stigmatella aurantiaca DW4/3-1] gi|309394676|gb|ADO72135.1| Ubiquinone/menaquinone biosynthesis methyltransferase [Stigmatella aurantiaca DW4/3-1] Length = 244 Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust. Identities = 21/57 (36%), Positives = 31/57 (54%) Query: 93 IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 +E + R+LDL TGTG + L +LK P VG+D S +EI + G+S + Sbjct: 52 LELKPGYRVLDLATGTGDLALKVLKHHPEGTVVGLDPSEGMMEIGRKKVAEEGLSAK 108 >gi|114706082|ref|ZP_01438985.1| hypothetical protein FP2506_16489 [Fulvimarina pelagi HTCC2506] gi|114538928|gb|EAU42049.1| hypothetical protein FP2506_16489 [Fulvimarina pelagi HTCC2506] Length = 115 Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust. Identities = 23/53 (43%), Positives = 32/53 (60%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151 RIL +G GTGA L+L + P + VGVD S + L+I ++ GVS+R D Sbjct: 59 ARILCVGAGTGAEILSLARAYPTWSFVGVDPSAEMLKICGASLNDAGVSDRCD 111 >gi|145241390|ref|XP_001393341.1| arsenite methyltransferase [Aspergillus niger CBS 513.88] gi|134077878|emb|CAK40104.1| unnamed protein product [Aspergillus niger] Length = 290 Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust. Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 2/70 (2%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 +S AF LP + D ILD+G G G + + + + + G+DIS L AKS A Sbjct: 27 AESEAAFLLPHLRTTDY--ILDVGCGPGTITIGFTRYATKGRTTGIDISPDVLRKAKSMA 84 Query: 142 VTNGVSERFD 151 G S +++ Sbjct: 85 AEAGCSMKWE 94 >gi|24376235|ref|NP_720343.1| type II DNA modification methyltransferase [Shewanella oneidensis MR-1] gi|24344700|gb|AAN52943.1| type II DNA modification methyltransferase, subtype gamma [Shewanella oneidensis MR-1] Length = 570 Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust. Identities = 35/140 (25%), Positives = 67/140 (47%), Gaps = 21/140 (15%) Query: 101 ILDLGTGTGAVCLALLKE---SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 I D G G + L+ L + + +G DI+ +++E++K + + R + + D+ Sbjct: 54 IADPAIGDGELILSFLSSLDSTDNIEVIGFDINLESIELSKKRILNFYPNVRINLIHGDY 113 Query: 158 FS-SVEG----------LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG-LSH 205 + G FD I++NPPY+ + + LG E F +S + G+ G + Sbjct: 114 LDYCINGNSDLCEYKLPKFDAIIANPPYVRTQV---LGAEQSQF---LSKNFGLKGRVDI 167 Query: 206 YRTIADGVSRHLNKDGLCSV 225 Y+ G+S+ L++DG+ V Sbjct: 168 YQAFLIGMSKCLSEDGVAGV 187 >gi|113474245|ref|YP_720306.1| type 11 methyltransferase [Trichodesmium erythraeum IMS101] gi|110165293|gb|ABG49833.1| Methyltransferase type 11 [Trichodesmium erythraeum IMS101] Length = 211 Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust. Identities = 23/80 (28%), Positives = 44/80 (55%), Gaps = 2/80 (2%) Query: 69 SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128 ++ ++ R ++ ++ + + +I+ + +ILD+ GTG LLK++P + +G+D Sbjct: 14 ANIYDWRWQSYIMNTLSFLHTWEQIDPQ--AKILDVACGTGEFERLLLKKNPTQRIIGID 71 Query: 129 ISCKALEIAKSNAVTNGVSE 148 IS K L IA+ TN E Sbjct: 72 ISEKMLNIARKKYQTNSNVE 91 >gi|305681483|ref|ZP_07404290.1| methyltransferase small domain protein [Corynebacterium matruchotii ATCC 14266] gi|305659688|gb|EFM49188.1| methyltransferase small domain protein [Corynebacterium matruchotii ATCC 14266] Length = 530 Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust. Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 4/94 (4%) Query: 84 SALAFSLPRIEKRDVV-RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142 A + SL R+ R V LDLG G+G LA L + + D+ +AL++A++ Sbjct: 161 GAASLSLLRMTCRTPVDSALDLGAGSGVQALAQLGCA--SQVTLTDVHPRALDMAEATLA 218 Query: 143 TNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYI 175 G + + L+ WF V G FD IV+NPP++ Sbjct: 219 AAGALPQAELLEGSWFEPVAGRTFDRIVANPPFV 252 >gi|239982975|ref|ZP_04705499.1| hypothetical protein SalbJ_26314 [Streptomyces albus J1074] gi|291454809|ref|ZP_06594199.1| conserved hypothetical protein [Streptomyces albus J1074] gi|291357758|gb|EFE84660.1| conserved hypothetical protein [Streptomyces albus J1074] Length = 512 Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust. Identities = 18/45 (40%), Positives = 30/45 (66%) Query: 93 IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137 + + R+LDLG G G + ALLK++ + + VG+D+S +AL +A Sbjct: 293 LARAGAARVLDLGCGQGQLVQALLKDARYTEIVGLDVSVRALAVA 337 >gi|239926646|ref|ZP_04683599.1| modification methylase, HemK family protein [Streptomyces ghanaensis ATCC 14672] gi|291434962|ref|ZP_06574352.1| modification methylase [Streptomyces ghanaensis ATCC 14672] gi|291337857|gb|EFE64813.1| modification methylase [Streptomyces ghanaensis ATCC 14672] Length = 114 Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust. Identities = 29/110 (26%), Positives = 53/110 (48%), Gaps = 4/110 (3%) Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215 D + ++G D++ +NPPY+ +V + E P ++ G DGL+ R + +R Sbjct: 5 DLLAELDGTVDLVTANPPYVPERLV--IPAEWSVHQPAQAIYSGWDGLTVPRAVVATAAR 62 Query: 216 HLNKDGLCSVEIGYNQKVD-VVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 L G+ ++E Y+ VD +V + S V + D+ G R ++ R Sbjct: 63 LLKDGGVLAME-HYDAIVDEIVELVRSAGFESVTSHVDHDGFPRYVIARR 111 >gi|210608457|ref|ZP_03287833.1| hypothetical protein CLONEX_00012 [Clostridium nexile DSM 1787] gi|210153033|gb|EEA84039.1| hypothetical protein CLONEX_00012 [Clostridium nexile DSM 1787] Length = 546 Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust. Identities = 32/78 (41%), Positives = 43/78 (55%), Gaps = 10/78 (12%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWF 158 + DL +GTG + L +P K V GV+I +A+E AK NA NG+S RF + D F Sbjct: 314 VFDLFSGTGTIAQVL---APVAKQVIGVEIVEEAVEAAKENAEHNGLSNCRF--IAGDVF 368 Query: 159 S---SVEGLFDVIVSNPP 173 +E DVIV +PP Sbjct: 369 KVLDEIEEKPDVIVLDPP 386 >gi|160901890|ref|YP_001567471.1| RNA methyltransferase [Petrotoga mobilis SJ95] gi|160359534|gb|ABX31148.1| RNA methyltransferase, TrmA family [Petrotoga mobilis SJ95] Length = 387 Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust. Identities = 25/70 (35%), Positives = 41/70 (58%), Gaps = 8/70 (11%) Query: 78 TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137 TE+L +AL+++ E DVV D +GTG + L L ++ K G++I +A+E A Sbjct: 227 TEVLYQTALSYA----ENSDVV--YDFYSGTGTISLLLANKAK--KVYGIEIIKEAVEAA 278 Query: 138 KSNAVTNGVS 147 K NA+ N ++ Sbjct: 279 KQNAILNNIN 288 >gi|115380548|ref|ZP_01467510.1| ubiquinone/menaquinone biosynthesis methyltransferase UbiE [Stigmatella aurantiaca DW4/3-1] gi|115362449|gb|EAU61722.1| ubiquinone/menaquinone biosynthesis methyltransferase UbiE [Stigmatella aurantiaca DW4/3-1] Length = 260 Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust. Identities = 21/57 (36%), Positives = 31/57 (54%) Query: 93 IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 +E + R+LDL TGTG + L +LK P VG+D S +EI + G+S + Sbjct: 68 LELKPGYRVLDLATGTGDLALKVLKHHPEGTVVGLDPSEGMMEIGRKKVAEEGLSAK 124 >gi|229105723|ref|ZP_04236352.1| Type I restriction-modification system, M subunit [Bacillus cereus Rock3-28] gi|228677612|gb|EEL31860.1| Type I restriction-modification system, M subunit [Bacillus cereus Rock3-28] Length = 497 Score = 40.0 bits (92), Expect = 0.36, Method: Compositional matrix adjust. Identities = 23/84 (27%), Positives = 43/84 (51%), Gaps = 4/84 (4%) Query: 95 KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS-ERFDTL 153 K ++ + D G+G++ L + KE+ +K G + +A+ N + + + +RFD Sbjct: 204 KSEIRSVYDGTCGSGSLLLRVGKEAKVYKYYGQEKVSTTYNLARMNMLLHDIPYQRFDIK 263 Query: 154 QSDWFSSVEGL---FDVIVSNPPY 174 +D + L F+ IV+NPPY Sbjct: 264 NADTLEEPQHLDERFEAIVANPPY 287 >gi|238854674|ref|ZP_04645004.1| ribosomal protein L11 methyltransferase [Lactobacillus jensenii 269-3] gi|260664383|ref|ZP_05865235.1| ribosomal protein L11 methyltransferase [Lactobacillus jensenii SJ-7A-US] gi|282932935|ref|ZP_06338332.1| ribosomal protein L11 methyltransferase [Lactobacillus jensenii 208-1] gi|238832464|gb|EEQ24771.1| ribosomal protein L11 methyltransferase [Lactobacillus jensenii 269-3] gi|260561448|gb|EEX27420.1| ribosomal protein L11 methyltransferase [Lactobacillus jensenii SJ-7A-US] gi|281302970|gb|EFA95175.1| ribosomal protein L11 methyltransferase [Lactobacillus jensenii 208-1] Length = 314 Score = 40.0 bits (92), Expect = 0.36, Method: Compositional matrix adjust. Identities = 43/152 (28%), Positives = 73/152 (48%), Gaps = 25/152 (16%) Query: 78 TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEI 136 T LV AL SL + V++LD+GTG+G + +A K K V DIS +A+ Sbjct: 162 TTQLVMMALERSLTK-----PVKVLDVGTGSGILAIAASKLGA--KSVLATDISDEAVTA 214 Query: 137 AKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL 196 A N N ++ + ++++ V+G FD+I++N ++ + L + D D ++ Sbjct: 215 ANENIALNKLN-NIEVIKANLLKDVDGKFDLILAN------ILAEILFDLIPDLDKHLAP 267 Query: 197 DG-----GIDGLSHYRTIADGVSRHLNKDGLC 223 +G GID L A+ V + L +G Sbjct: 268 NGKVIFSGIDYLQ-----AEKVKQRLADNGFS 294 >gi|167565996|ref|ZP_02358912.1| hypothetical protein BoklE_25784 [Burkholderia oklahomensis EO147] Length = 329 Score = 40.0 bits (92), Expect = 0.36, Method: Compositional matrix adjust. Identities = 36/121 (29%), Positives = 56/121 (46%), Gaps = 13/121 (10%) Query: 71 TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130 +F P+PE +L K +I+DLG+G+G + +L + +GVGVD+S Sbjct: 139 SFYPQPERAIL-------------KLRPKKIVDLGSGSGGFLIRMLHQLDGARGVGVDLS 185 Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDF 190 A AK A NG +ER + L S +E + ++ + V+ D L E R Sbjct: 186 ETATAQAKQAAEANGFAERLEFLHRPIQSLIEDPTPLKGADVVHAGFVMHDLLPAEERTL 245 Query: 191 D 191 D Sbjct: 246 D 246 >gi|315443843|ref|YP_004076722.1| methylase involved in ubiquinone/menaquinone biosynthesis [Mycobacterium sp. Spyr1] gi|315262146|gb|ADT98887.1| methylase involved in ubiquinone/menaquinone biosynthesis [Mycobacterium sp. Spyr1] Length = 206 Score = 40.0 bits (92), Expect = 0.36, Method: Compositional matrix adjust. Identities = 28/81 (34%), Positives = 46/81 (56%), Gaps = 5/81 (6%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R LDLG G G L L + ++ VGVDIS AL A A G+++R Q+D + Sbjct: 38 RALDLGCGEGGDTLWLAEHG--WEVVGVDISDTALRRAAEEADKRGLADRVQLRQTDLSA 95 Query: 160 SV-EGLFDVIVSNPPYIESVI 179 S +G+FD++ + +++S++ Sbjct: 96 SFPDGVFDLVSAQ--FLQSMV 114 >gi|257095671|ref|YP_003169312.1| 50S ribosomal protein L11 methyltransferase [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257048195|gb|ACV37383.1| ribosomal protein L11 methyltransferase [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 296 Score = 40.0 bits (92), Expect = 0.36, Method: Compositional matrix adjust. Identities = 38/111 (34%), Positives = 57/111 (51%), Gaps = 18/111 (16%) Query: 74 PRPETELLV-DSALAF---SLPRIE------KRDV---VRILDLGTGTGAVCLALLKESP 120 P PE +LV D +AF S P +R V + +LD G G+G + +A + Sbjct: 128 PDPEAMVLVLDPGMAFGTGSHPTTRLCLEWLERSVTPGLSVLDYGCGSGILAIASARLG- 186 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSN 171 + VGVDI +A+ ++SNA NGVS RF + + G FD++V+N Sbjct: 187 AAEVVGVDIDEQAVIASRSNAERNGVSARFQGSGRE----LNGQFDLVVAN 233 >gi|261417528|ref|YP_003251210.1| methyltransferase small [Geobacillus sp. Y412MC61] gi|297528403|ref|YP_003669678.1| methyltransferase small [Geobacillus sp. C56-T3] gi|319765185|ref|YP_004130686.1| methyltransferase small [Geobacillus sp. Y412MC52] gi|261373985|gb|ACX76728.1| methyltransferase small [Geobacillus sp. Y412MC61] gi|297251655|gb|ADI25101.1| methyltransferase small [Geobacillus sp. C56-T3] gi|317110051|gb|ADU92543.1| methyltransferase small [Geobacillus sp. Y412MC52] Length = 249 Score = 40.0 bits (92), Expect = 0.36, Method: Compositional matrix adjust. Identities = 25/90 (27%), Positives = 48/90 (53%), Gaps = 9/90 (10%) Query: 100 RILDLGTGTGAVCLALLKESPFFKG--VGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 +I+DL TG G + L L + + KG +G++I + ++A+ + NG+ + + + D Sbjct: 48 QIVDLCTGNGVIPLLLSRRT---KGTIIGIEIQERLCDMARRSVQYNGLEGQIEIIHGDI 104 Query: 158 FSSVEGL----FDVIVSNPPYIESVIVDCL 183 + + + +DV+ NPPY +V D L Sbjct: 105 KEAPQRIGYSRYDVVTCNPPYFPAVGKDEL 134 >gi|134293400|ref|YP_001117136.1| methyltransferase type 11 [Burkholderia vietnamiensis G4] gi|134136557|gb|ABO57671.1| Methyltransferase type 11 [Burkholderia vietnamiensis G4] Length = 283 Score = 40.0 bits (92), Expect = 0.36, Method: Compositional matrix adjust. Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 1/71 (1%) Query: 101 ILDLGTGTGAVCLALLKE-SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 +LD+G GTGAV LA+ + + + GVDIS + + A+ A +GV+ F + Sbjct: 53 VLDVGCGTGAVTLAIARRLAKDAQCTGVDISARMIAAARERAERDGVAAEFVHADAQTHP 112 Query: 160 SVEGLFDVIVS 170 FD+IVS Sbjct: 113 FARERFDLIVS 123 >gi|282862493|ref|ZP_06271555.1| Methyltransferase type 11 [Streptomyces sp. ACTE] gi|282562832|gb|EFB68372.1| Methyltransferase type 11 [Streptomyces sp. ACTE] Length = 237 Score = 40.0 bits (92), Expect = 0.36, Method: Compositional matrix adjust. Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 4/74 (5%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 +R+LDLG GTGA ALL+ +P + D S LE A++ + V RF ++ Sbjct: 50 LRVLDLGCGTGASTRALLRAAPHARITAADASAGMLERARAKRWPSNV--RFLHRSAEAL 107 Query: 159 SSV--EGLFDVIVS 170 +S +G++D + + Sbjct: 108 ASAGHDGVYDAVFA 121 >gi|261212266|ref|ZP_05926552.1| 16S RNA G1207 methylase RsmC [Vibrio sp. RC341] gi|260838874|gb|EEX65525.1| 16S RNA G1207 methylase RsmC [Vibrio sp. RC341] Length = 340 Score = 40.0 bits (92), Expect = 0.36, Method: Compositional matrix adjust. Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 2/75 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 +++D+G G G + + K +P + DIS A+ ++ + N +S R SD S Sbjct: 203 KVIDIGCGAGVLGCVMAKLNPEIELEMTDISALAIRSSQETLIANQLSGR--VYPSDMLS 260 Query: 160 SVEGLFDVIVSNPPY 174 +V + IV+NPP+ Sbjct: 261 NVGSQYHYIVTNPPF 275 >gi|227508544|ref|ZP_03938593.1| site-specific DNA-methyltransferase (adenine-specific), HsdM subunit [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227191876|gb|EEI71943.1| site-specific DNA-methyltransferase (adenine-specific), HsdM subunit [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 532 Score = 40.0 bits (92), Expect = 0.36, Method: Compositional matrix adjust. Identities = 25/92 (27%), Positives = 48/92 (52%), Gaps = 8/92 (8%) Query: 89 SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS- 147 L + + +V + D G+G++ L + + + G +++ +A+ N + +G++ Sbjct: 216 QLVTLNREEVRTVYDPTMGSGSLLLRVGDYAKVAEYYGQELNGTTYNLARMNMLMHGINY 275 Query: 148 ERFD-----TLQSDWFSSVEGLFDVIVSNPPY 174 RFD TL++D F E FD +V+NPPY Sbjct: 276 SRFDLRQGDTLENDQFP--ERTFDAVVANPPY 305 >gi|302383414|ref|YP_003819237.1| methyltransferase small [Brevundimonas subvibrioides ATCC 15264] gi|302194042|gb|ADL01614.1| methyltransferase small [Brevundimonas subvibrioides ATCC 15264] Length = 254 Score = 40.0 bits (92), Expect = 0.36, Method: Compositional matrix adjust. Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 4/81 (4%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+L+ G G GAV + P GV+ A+ + N N + +R +Q+D Sbjct: 52 RVLEAGCGVGAVLTQIAARRPGVVVTGVERDPAAVALGACNVGLNALQDRMAVVQADVAG 111 Query: 160 SVEGL----FDVIVSNPPYIE 176 L FD VSNPP+ + Sbjct: 112 GFAALGRERFDWAVSNPPFFD 132 >gi|227510763|ref|ZP_03940812.1| type I site-specific deoxyribonuclease [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227189765|gb|EEI69832.1| type I site-specific deoxyribonuclease [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 540 Score = 40.0 bits (92), Expect = 0.36, Method: Compositional matrix adjust. Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 9/88 (10%) Query: 96 RDVVRILDLGTGTGAVCLAL---LKESPFFKGVGVDISCKALEIAKSNAVTNGVS----- 147 + V I D G+G++ L + +++ G +++ +A+ N + +GVS Sbjct: 230 KQVRTIYDPAVGSGSLLLNVGQHVQDPSLVSYHGQELNTTTYNLARMNLMLHGVSYDDMH 289 Query: 148 -ERFDTLQSDWFSSVEGLFDVIVSNPPY 174 DTL DW LFD +V NPPY Sbjct: 290 LRNGDTLSKDWPVDEPYLFDAVVMNPPY 317 >gi|227523728|ref|ZP_03953777.1| site-specific DNA-methyltransferase (adenine-specific), HsdM subunit [Lactobacillus hilgardii ATCC 8290] gi|227089043|gb|EEI24355.1| site-specific DNA-methyltransferase (adenine-specific), HsdM subunit [Lactobacillus hilgardii ATCC 8290] Length = 532 Score = 40.0 bits (92), Expect = 0.36, Method: Compositional matrix adjust. Identities = 25/92 (27%), Positives = 48/92 (52%), Gaps = 8/92 (8%) Query: 89 SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS- 147 L + + +V + D G+G++ L + + + G +++ +A+ N + +G++ Sbjct: 216 QLVTLNREEVRTVYDPTMGSGSLLLRVGDYAKVAEYYGQELNGTTYNLARMNMLMHGINY 275 Query: 148 ERFD-----TLQSDWFSSVEGLFDVIVSNPPY 174 RFD TL++D F E FD +V+NPPY Sbjct: 276 SRFDLRQGDTLENDQFP--ERTFDAVVANPPY 305 >gi|116671900|ref|YP_832833.1| methyltransferase small [Arthrobacter sp. FB24] gi|116612009|gb|ABK04733.1| methyltransferase small [Arthrobacter sp. FB24] Length = 547 Score = 40.0 bits (92), Expect = 0.36, Method: Compositional matrix adjust. Identities = 32/95 (33%), Positives = 42/95 (44%), Gaps = 20/95 (21%) Query: 95 KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG--------- 145 +R V R LDLGTG G LL + DIS +AL + N + N Sbjct: 187 RRQVPRALDLGTGCGIQTFHLLHHADHV--TATDISARALAFTRFNLLLNAGALGIDPAT 244 Query: 146 ----VSERFDTLQSDWFSSVEG-LFDVIVSNPPYI 175 VS R +L V G FD++VSNPP++ Sbjct: 245 PEDRVSLRLGSL----LEPVAGEAFDLVVSNPPFV 275 >gi|284052982|ref|ZP_06383192.1| methyltransferase type 11 [Arthrospira platensis str. Paraca] gi|291571130|dbj|BAI93402.1| putative methyltransferase [Arthrospira platensis NIES-39] Length = 289 Score = 40.0 bits (92), Expect = 0.37, Method: Compositional matrix adjust. Identities = 20/51 (39%), Positives = 31/51 (60%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150 RILDLG GTG+ L L + P + +G+D+S L +A++ A G+ +F Sbjct: 102 RILDLGCGTGSTTLLLKQTFPNAEVIGLDLSPYMLAVAETKAKQAGLDIKF 152 >gi|254506473|ref|ZP_05118615.1| ribosomal protein L11 methyltransferase [Vibrio parahaemolyticus 16] gi|219550647|gb|EED27630.1| ribosomal protein L11 methyltransferase [Vibrio parahaemolyticus 16] Length = 295 Score = 40.0 bits (92), Expect = 0.37, Method: Compositional matrix adjust. Identities = 34/112 (30%), Positives = 56/112 (50%), Gaps = 17/112 (15%) Query: 74 PRPET-ELLVDSALAFS----------LPRIEKRDVV--RILDLGTGTGAVCLALLKESP 120 P P+ +++D LAF L +E D+ ++D G G+G + +A +K Sbjct: 123 PEPDAVNVMLDPGLAFGTGTHPTTALCLEWLEGLDLTGKTVIDFGCGSGILAIAAIKLG- 181 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF-DVIVSN 171 K +G+DI +AL +K NA NGV+++ + EGL DV+V+N Sbjct: 182 AEKVIGIDIDPQALLASKDNAERNGVADQLEVFLPQ--DQPEGLIADVVVAN 231 >gi|50955207|ref|YP_062495.1| hypothetical protein Lxx15950 [Leifsonia xyli subsp. xyli str. CTCB07] gi|50951689|gb|AAT89390.1| conserved hypothetical protein [Leifsonia xyli subsp. xyli str. CTCB07] Length = 203 Score = 40.0 bits (92), Expect = 0.37, Method: Compositional matrix adjust. Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 4/75 (5%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 + LDLG G G + L L ESP VD++ +AL++ + NA G+ + + + D Sbjct: 63 QFLDLGCGWGPLALTLALESPHATVWAVDVNTRALDVVRRNAEKLGL-KNVNPVTPD--R 119 Query: 160 SVEGL-FDVIVSNPP 173 +GL F I SNPP Sbjct: 120 VPDGLEFTTIWSNPP 134 >gi|17229012|ref|NP_485560.1| hypothetical protein alr1520 [Nostoc sp. PCC 7120] gi|17135340|dbj|BAB77886.1| alr1520 [Nostoc sp. PCC 7120] Length = 219 Score = 40.0 bits (92), Expect = 0.37, Method: Compositional matrix adjust. Identities = 26/85 (30%), Positives = 47/85 (55%), Gaps = 5/85 (5%) Query: 76 PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135 P + +VD+ L + ++ K DV + DLG+G G + ++ +G+G+DI+ + ++ Sbjct: 68 PTPQPVVDAMLQVA--QVGKNDV--LYDLGSGDGRIVNTAAQKF-GTRGIGIDINPERIQ 122 Query: 136 IAKSNAVTNGVSERFDTLQSDWFSS 160 A NA GVS+R +Q D F + Sbjct: 123 EANENAQKAGVSDRVKFVQQDLFKT 147 >gi|312622232|ref|YP_004023845.1| 50S ribosomal protein L11 methyltransferase [Caldicellulosiruptor kronotskyensis 2002] gi|312202699|gb|ADQ46026.1| ribosomal protein L11 methyltransferase [Caldicellulosiruptor kronotskyensis 2002] Length = 306 Score = 40.0 bits (92), Expect = 0.37, Method: Compositional matrix adjust. Identities = 36/136 (26%), Positives = 68/136 (50%), Gaps = 26/136 (19%) Query: 57 WRDFY------NVRLTLSSDTFEPR-PETELLVDSALAFS----------LPRIEK--RD 97 W+ +Y N+ + S + ++ +T + +D +AF L I+K + Sbjct: 109 WKKYYKPVEIGNIVIVPSWEDYKAEDSKTIVWLDPGMAFGTGTHESTILCLEAIQKYVKP 168 Query: 98 VVRILDLGTGTGAVCLALLKESPFF--KGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155 + +LD+GTG+G + +A K F + + VDI A+++A+ NA NGV + ++ Sbjct: 169 GMDVLDVGTGSGILAIAAKK---FLARRVLAVDIDEVAVKVAEENARLNGV--EIEIKKN 223 Query: 156 DWFSSVEGLFDVIVSN 171 D +E FDV+++N Sbjct: 224 DLVEGIEEKFDVVIAN 239 >gi|229817998|ref|ZP_04448280.1| hypothetical protein BIFANG_03285 [Bifidobacterium angulatum DSM 20098] gi|229784602|gb|EEP20716.1| hypothetical protein BIFANG_03285 [Bifidobacterium angulatum DSM 20098] Length = 211 Score = 40.0 bits (92), Expect = 0.37, Method: Compositional matrix adjust. Identities = 34/106 (32%), Positives = 51/106 (48%), Gaps = 11/106 (10%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE----RFDT---- 152 +LDLG G G + L+L SP +D++ +ALE+ NA NG R D Sbjct: 62 LLDLGCGWGPIALSLAMASPEANVWALDVNERALELTALNAKRNGCGNVRTVRTDADALP 121 Query: 153 LQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG 198 ++ D S + FD I SNPP + + L + ++ PR+S G Sbjct: 122 VEPDAISP-DLTFDAIWSNPPI--RIGKEALHTLLMNWLPRLSDTG 164 >gi|225021251|ref|ZP_03710443.1| hypothetical protein CORMATOL_01263 [Corynebacterium matruchotii ATCC 33806] gi|224945984|gb|EEG27193.1| hypothetical protein CORMATOL_01263 [Corynebacterium matruchotii ATCC 33806] Length = 530 Score = 40.0 bits (92), Expect = 0.37, Method: Compositional matrix adjust. Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 4/94 (4%) Query: 84 SALAFSLPRIEKRDVV-RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142 A + SL R+ R V LDLG G+G LA L + + D+ +AL++A++ Sbjct: 161 GAASLSLLRMTCRTPVDSALDLGAGSGVQALAQLGCA--SQVTLTDVHPRALDMAEATLA 218 Query: 143 TNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYI 175 G + + L+ WF V G FD IV+NPP++ Sbjct: 219 AAGALPQTELLEGSWFEPVAGRTFDRIVANPPFV 252 >gi|209526553|ref|ZP_03275079.1| Methyltransferase type 11 [Arthrospira maxima CS-328] gi|209493059|gb|EDZ93388.1| Methyltransferase type 11 [Arthrospira maxima CS-328] Length = 289 Score = 40.0 bits (92), Expect = 0.37, Method: Compositional matrix adjust. Identities = 20/51 (39%), Positives = 31/51 (60%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150 RILDLG GTG+ L L + P + +G+D+S L +A++ A G+ +F Sbjct: 102 RILDLGCGTGSTTLLLKQTFPNAEVIGLDLSPYMLAVAETKAKQAGLDIKF 152 >gi|52081093|ref|YP_079884.1| ribosomal protein L11 methyltransferase [Bacillus licheniformis ATCC 14580] gi|52786472|ref|YP_092301.1| ribosomal protein L11 methyltransferase [Bacillus licheniformis ATCC 14580] gi|319644949|ref|ZP_07999182.1| ribosomal protein L11 methyltransferase [Bacillus sp. BT1B_CT2] gi|81825250|sp|Q65H56|PRMA_BACLD RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11 Mtase gi|52004304|gb|AAU24246.1| Ribosomal protein L11 methyltransferase [Bacillus licheniformis ATCC 14580] gi|52348974|gb|AAU41608.1| YqeT [Bacillus licheniformis ATCC 14580] gi|317392758|gb|EFV73552.1| ribosomal protein L11 methyltransferase [Bacillus sp. BT1B_CT2] Length = 311 Score = 40.0 bits (92), Expect = 0.37, Method: Compositional matrix adjust. Identities = 25/73 (34%), Positives = 42/73 (57%), Gaps = 5/73 (6%) Query: 101 ILDLGTGTG--AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 ++D+GTGTG ++ A+L+ G D+ A+E A+ N+ N VS+ + Q++ Sbjct: 179 VVDVGTGTGILSIASAMLRAKQVE---GYDLDPVAVESARLNSKLNKVSDHIEIKQNNLL 235 Query: 159 SSVEGLFDVIVSN 171 VEG D+IV+N Sbjct: 236 DGVEGEKDIIVAN 248 >gi|297580750|ref|ZP_06942676.1| conserved hypothetical protein [Vibrio cholerae RC385] gi|297535166|gb|EFH74001.1| conserved hypothetical protein [Vibrio cholerae RC385] Length = 340 Score = 40.0 bits (92), Expect = 0.37, Method: Compositional matrix adjust. Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 2/75 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 +++D+G G G + + K +P + DIS A+ ++ V N + SD FS Sbjct: 203 KVIDIGCGAGVLGCVMAKLNPHIELEMTDISALAIRSSQETLVANQLHGH--VYPSDMFS 260 Query: 160 SVEGLFDVIVSNPPY 174 +D IV+NPP+ Sbjct: 261 DTGHHYDYIVTNPPF 275 >gi|262392969|ref|YP_003284823.1| ribosomal protein L11 methyltransferase [Vibrio sp. Ex25] gi|262336563|gb|ACY50358.1| ribosomal protein L11 methyltransferase [Vibrio sp. Ex25] Length = 295 Score = 40.0 bits (92), Expect = 0.37, Method: Compositional matrix adjust. Identities = 34/112 (30%), Positives = 57/112 (50%), Gaps = 17/112 (15%) Query: 74 PRPET-ELLVDSALAFS----------LPRIEKRDVV--RILDLGTGTGAVCLALLKESP 120 P P+ +++D LAF L +E D+ ++D G G+G + +A +K Sbjct: 123 PDPDAVNVMLDPGLAFGTGTHPTTALCLEWLESMDLSGKTVIDFGCGSGILAIAAIKLG- 181 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF-DVIVSN 171 K +G+DI +AL +K NA NGV+++ + + EGL DV+V+N Sbjct: 182 AEKVIGIDIDPQALLASKDNAERNGVADKLEVYLPQ--NQPEGLIADVVVAN 231 >gi|258645194|ref|ZP_05732663.1| SAM-dependent methyltransferase [Dialister invisus DSM 15470] gi|260402543|gb|EEW96090.1| SAM-dependent methyltransferase [Dialister invisus DSM 15470] Length = 249 Score = 40.0 bits (92), Expect = 0.37, Method: Compositional matrix adjust. Identities = 36/123 (29%), Positives = 58/123 (47%), Gaps = 10/123 (8%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 +DS LA I K+D RI DLGTGTG + L LL +I+ ++A+ N Sbjct: 33 LDSILAAHYVSIRKKD--RIADLGTGTGVIAL-LLSALGGEDITAFEINPVMADLARRNV 89 Query: 142 VTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIE---SVIVDCLGLEVRDFDPRI 194 N S+ ++ D + + G F+ +V NPPY E + C G+ ++ + Sbjct: 90 NGNNKSDCIKVVEYDCRNVKKIYPTGSFNSVVVNPPYREIGTGRMNHCEGVASASYELNV 149 Query: 195 SLD 197 +L+ Sbjct: 150 TLE 152 >gi|220908397|ref|YP_002483708.1| Histone methylation DOT1 family protein [Cyanothece sp. PCC 7425] gi|219865008|gb|ACL45347.1| Histone methylation DOT1 family protein [Cyanothece sp. PCC 7425] Length = 207 Score = 40.0 bits (92), Expect = 0.37, Method: Compositional matrix adjust. Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 1/60 (1%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 + DLG+G G V + + + +GVGVDI + ++ AK NA GVS+R +Q D F + Sbjct: 78 VYDLGSGDGRVVI-IAAQKYGARGVGVDIDPQRIQEAKVNAQRAGVSDRVRFIQQDLFQT 136 >gi|319789216|ref|YP_004150849.1| protein of unknown function Met10 [Thermovibrio ammonificans HB-1] gi|317113718|gb|ADU96208.1| protein of unknown function Met10 [Thermovibrio ammonificans HB-1] Length = 399 Score = 40.0 bits (92), Expect = 0.38, Method: Compositional matrix adjust. Identities = 22/55 (40%), Positives = 32/55 (58%), Gaps = 6/55 (10%) Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPP 173 V VD S AL++A+ NA NGV E+F ++ D F ++ + FD IV +PP Sbjct: 247 VAVDSSQLALDLARENAALNGVEEKFTFVKGDAFKVLKEMSLWGEKFDSIVIDPP 301 >gi|223982933|ref|ZP_03633145.1| hypothetical protein HOLDEFILI_00421 [Holdemania filiformis DSM 12042] gi|223965094|gb|EEF69394.1| hypothetical protein HOLDEFILI_00421 [Holdemania filiformis DSM 12042] Length = 402 Score = 40.0 bits (92), Expect = 0.38, Method: Compositional matrix adjust. Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 7/79 (8%) Query: 100 RILDLGTGTGAVCL-ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 R+LD + TG L A L + V VD+S AL+ ++NAV N + +R +++D F Sbjct: 230 RVLDCFSHTGGFALNAALGNAQSV--VAVDVSQTALDQGRANAVLNHLEDRIQFVKADVF 287 Query: 159 SSVE----GLFDVIVSNPP 173 ++ G +D+IV +PP Sbjct: 288 EYLDRCAMGQYDIIVLDPP 306 >gi|145223482|ref|YP_001134160.1| methyltransferase type 11 [Mycobacterium gilvum PYR-GCK] gi|145215968|gb|ABP45372.1| Methyltransferase type 11 [Mycobacterium gilvum PYR-GCK] Length = 206 Score = 40.0 bits (92), Expect = 0.38, Method: Compositional matrix adjust. Identities = 28/81 (34%), Positives = 46/81 (56%), Gaps = 5/81 (6%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R LDLG G G L L + ++ VGVDIS AL A A G+++R Q+D + Sbjct: 38 RALDLGCGEGGDTLWLAEHG--WEVVGVDISDTALRRAAEEADKRGLADRVQLRQTDLSA 95 Query: 160 SV-EGLFDVIVSNPPYIESVI 179 S +G+FD++ + +++S++ Sbjct: 96 SFPDGVFDLVSAQ--FLQSMV 114 >gi|297617814|ref|YP_003702973.1| ribosomal protein L11 methyltransferase [Syntrophothermus lipocalidus DSM 12680] gi|297145651|gb|ADI02408.1| ribosomal protein L11 methyltransferase [Syntrophothermus lipocalidus DSM 12680] Length = 308 Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust. Identities = 37/136 (27%), Positives = 65/136 (47%), Gaps = 23/136 (16%) Query: 57 WRDFYNV-----RLTL--SSDTFEPRP-ETELLVDSALAFS----------LPRIEK--- 95 W+ +Y+ RL + S + + P E + +D +AF L IEK Sbjct: 109 WKSYYHSLKIGKRLVIKPSWEDYRAEPGEVVIEIDPGMAFGTGTHATTRFCLELIEKYVS 168 Query: 96 RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155 +D+ ++D+GTG+G + +A K + + +D+ A+++AK N NGV E+ + Sbjct: 169 KDMT-LIDIGTGSGILAIAAAKLGAR-RIIALDLDPVAVQVAKENVARNGVEEQVEVWNL 226 Query: 156 DWFSSVEGLFDVIVSN 171 D+ E D+IV N Sbjct: 227 DFREMPETRADLIVGN 242 >gi|284044885|ref|YP_003395225.1| methyltransferase type 11 [Conexibacter woesei DSM 14684] gi|283949106|gb|ADB51850.1| Methyltransferase type 11 [Conexibacter woesei DSM 14684] Length = 255 Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust. Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 2/67 (2%) Query: 90 LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 L R+E R +LDLG GTG + ALL+ P + V VD S +E A++ G R Sbjct: 26 LDRLELRGEETVLDLGCGTGRITRALLERLPAGRVVAVDGSAAMVERARAELA--GAGTR 83 Query: 150 FDTLQSD 156 +QSD Sbjct: 84 ATVIQSD 90 >gi|253581068|ref|ZP_04858328.1| methyltransferase type 11 [Ruminococcus sp. 5_1_39B_FAA] gi|251847604|gb|EES75574.1| methyltransferase type 11 [Ruminococcus sp. 5_1_39BFAA] Length = 246 Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust. Identities = 25/98 (25%), Positives = 50/98 (51%), Gaps = 6/98 (6%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 +D+ L +++K + LDLGTGTG + + L ++ G++I + ++A + Sbjct: 32 MDAVLLSGFAKVKKGETA--LDLGTGTGIIPILLKTKTNGKHFTGLEIQKECADMAGRSV 89 Query: 142 VTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYI 175 N + + + ++ D + + FDV+ SNPPY+ Sbjct: 90 RYNHLEDDVEIVRGDIKEAADIFGAASFDVVTSNPPYM 127 >gi|291326559|ref|ZP_06124994.2| ribosomal protein L11 methyltransferase [Providencia rettgeri DSM 1131] gi|291313550|gb|EFE54003.1| ribosomal protein L11 methyltransferase [Providencia rettgeri DSM 1131] Length = 319 Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust. Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 14/97 (14%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159 ++D G G+G + +A LK +G+DI +A+ ++ NA NGVSER L D + Sbjct: 187 VIDFGCGSGILAIAALKLG-AAHAIGIDIDPQAITASRDNAQRNGVSERLSLYLPKDQPN 245 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL 196 ++ DV+V+N L +R+ P IS+ Sbjct: 246 DLQA--DVVVAN----------ILAGPLRELAPMISV 270 >gi|224367223|ref|YP_002601386.1| two domain fusion protein (N:methyltransferase, C:TPR-repeat family protein) [Desulfobacterium autotrophicum HRM2] gi|223689939|gb|ACN13222.1| two domain fusion protein (N:methyltransferase, C:TPR-repeat family protein) [Desulfobacterium autotrophicum HRM2] Length = 450 Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust. Identities = 35/87 (40%), Positives = 45/87 (51%), Gaps = 8/87 (9%) Query: 86 LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTN 144 L F L R + + ILD+G GTG L PF K + GVD+S K LE A + N Sbjct: 278 LLFDLVRPYLTEQLNILDIGCGTG---LGAKLYQPFAKSLTGVDVSSKMLEKAAEKKLYN 334 Query: 145 GVSERFDTLQSDWFSSVEGLFDVIVSN 171 + E FD LQ DW + FD+I S+ Sbjct: 335 RL-EVFDILQ-DW--TFPKKFDLIYSS 357 >gi|72163488|ref|YP_291145.1| methyltransferase [Thermobifida fusca YX] gi|71917220|gb|AAZ57122.1| putative methyltransferase [Thermobifida fusca YX] Length = 241 Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust. Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 5/87 (5%) Query: 84 SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143 SA LPR K +RILDLG GTGA ALL +P + VD S L +A+ Sbjct: 39 SAARLRLPR--KGAGLRILDLGCGTGASTAALLHVAPHADILAVDASVGMLAVARRKTWP 96 Query: 144 NGVSERFDTLQSDWFSSVEGLFDVIVS 170 + V +F +++ + + G FD + + Sbjct: 97 DNV--QFHHARAETLAGI-GPFDAVFA 120 >gi|229512885|ref|ZP_04402352.1| ribosomal RNA small subunit methyltransferase C [Vibrio cholerae TMA 21] gi|229350134|gb|EEO15087.1| ribosomal RNA small subunit methyltransferase C [Vibrio cholerae TMA 21] Length = 340 Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust. Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 2/75 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 +++D+G G G + + K +P + DIS A+ ++ V N + SD FS Sbjct: 203 KVIDIGCGAGVLGCVMAKLNPHIELEMTDISALAIRSSQETLVANQLHGH--VYPSDMFS 260 Query: 160 SVEGLFDVIVSNPPY 174 +D IV+NPP+ Sbjct: 261 DTGHHYDYIVTNPPF 275 >gi|212544756|ref|XP_002152532.1| conserved hypothetical protein [Penicillium marneffei ATCC 18224] gi|210065501|gb|EEA19595.1| conserved hypothetical protein [Penicillium marneffei ATCC 18224] Length = 339 Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust. Identities = 55/205 (26%), Positives = 87/205 (42%), Gaps = 44/205 (21%) Query: 18 SSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV---------RLTLS 68 S + IVD S DDR + +++ K+E+ R +RD + RL L Sbjct: 28 SDNSDIVDTSSTFDDRTTIV---SSIKNYKYENGRRYHSFRDGEYLLPNDEREQERLDLL 84 Query: 69 SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128 TF LL++ L R + VR+LD GTGTG + +E+P + +G D Sbjct: 85 HHTFR------LLLNGELY----RAPLSNPVRVLDFGTGTGVWAIDFAEENPRTEVLGTD 134 Query: 129 ISCKALEIAKSNAVTNGVSERF--DTLQSDWFSSVEGLFDVI--------VSNPPYIESV 178 +S SN RF D ++S+W + FD I + + + + Sbjct: 135 LSPIQPSWFPSNC-------RFEVDDVESEWLYGYQS-FDYIHCRGMTGSIRDWQKLFAQ 186 Query: 179 IVDCL----GLEVRDFDPRISLDGG 199 VD L +EV++++ IS D G Sbjct: 187 AVDNLQPGGWMEVQEYEIEISSDDG 211 >gi|157693045|ref|YP_001487507.1| ribosomal protein L11 methyltransferase [Bacillus pumilus SAFR-032] gi|166989894|sp|A8FFD0|PRMA_BACP2 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11 Mtase gi|157681803|gb|ABV62947.1| ribosomal protein L11 methyltransferase [Bacillus pumilus SAFR-032] Length = 311 Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust. Identities = 38/143 (26%), Positives = 64/143 (44%), Gaps = 34/143 (23%) Query: 56 GWRDFYN-------VRLTLSSDTFEPRPETELLV--DSALAF-------------SLPR- 92 W+ +Y+ + + + + P EL++ D +AF +L R Sbjct: 113 AWKKYYHPVKISEKFTIVPTWEEYTPVHSDELIIEMDPGMAFGTGTHPTTVLCIQALERY 172 Query: 93 IEKRDVVRILDLGTGTG----AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148 +++ D V +D+GTG+G A + K+ F D+ A+E AK N NGVSE Sbjct: 173 VKENDTV--IDVGTGSGILSVAAAMVGAKDIQAF-----DLDTVAVESAKQNIELNGVSE 225 Query: 149 RFDTLQSDWFSSVEGLFDVIVSN 171 + Q++ + G DVIV+N Sbjct: 226 QVTVKQNNLLDGISGEHDVIVAN 248 >gi|293446930|ref|ZP_06663352.1| O-methyltransferase [Escherichia coli B088] gi|291323760|gb|EFE63188.1| O-methyltransferase [Escherichia coli B088] Length = 285 Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust. Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 4/84 (4%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 V R LD+G G+G + L L + + + V++ +A A+ N + +ER + +D Sbjct: 85 VKRCLDIGAGSGLLALMLAQRTDDSVIIDAVELESEAAAQAQENINQSPWAERINVHTAD 144 Query: 157 ---WFSSVEGLFDVIVSNPPYIES 177 W + FD+I+SNPPY + Sbjct: 145 IQQWITQQTVRFDLIISNPPYYQQ 168 >gi|153825680|ref|ZP_01978347.1| conserved hypothetical protein [Vibrio cholerae MZO-2] gi|149740617|gb|EDM54726.1| conserved hypothetical protein [Vibrio cholerae MZO-2] Length = 340 Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust. Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 2/75 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 +++D+G G G + + K +P + DIS A+ ++ V N + SD FS Sbjct: 203 KVIDIGCGAGVLGCVMAKLNPHIELEMTDISALAIRSSQETLVANQLHGH--VYPSDMFS 260 Query: 160 SVEGLFDVIVSNPPY 174 +D IV+NPP+ Sbjct: 261 DTGHHYDYIVTNPPF 275 >gi|170719525|ref|YP_001747213.1| hypothetical protein PputW619_0338 [Pseudomonas putida W619] gi|169757528|gb|ACA70844.1| conserved hypothetical protein [Pseudomonas putida W619] Length = 398 Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust. Identities = 33/113 (29%), Positives = 54/113 (47%), Gaps = 30/113 (26%) Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPP-YIESVI 179 VD S AL+ + NA NG+SE+ ++ D F ++ L FDVI+++PP +I+ Sbjct: 249 VDASGFALDGVERNAALNGISEKLTCIEGDVFEALRELKAAEERFDVIIADPPAFIK--- 305 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL-----CSVEI 227 R D + +G + YR + + R L KDG+ CS+ + Sbjct: 306 --------RKKDLK-------NGEAAYRRLNEQAMRMLTKDGILVSASCSMHL 343 >gi|262191798|ref|ZP_06049970.1| 16S RNA G1207 methylase RsmC [Vibrio cholerae CT 5369-93] gi|262032332|gb|EEY50898.1| 16S RNA G1207 methylase RsmC [Vibrio cholerae CT 5369-93] Length = 340 Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust. Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 2/75 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 +++D+G G G + + K +P + DIS A+ ++ V N + SD FS Sbjct: 203 KVIDIGCGAGVLGCVMAKLNPHIELEMTDISALAIRSSQETLVANQLHGH--VYPSDMFS 260 Query: 160 SVEGLFDVIVSNPPY 174 +D IV+NPP+ Sbjct: 261 DTGHHYDYIVTNPPF 275 >gi|260598958|ref|YP_003211529.1| hypothetical protein CTU_31660 [Cronobacter turicensis z3032] gi|260218135|emb|CBA32941.1| Uncharacterized protein yfiC [Cronobacter turicensis z3032] Length = 256 Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust. Identities = 23/85 (27%), Positives = 42/85 (49%), Gaps = 4/85 (4%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD-- 156 R+LD+G G+G + L L + + + V++ +A E A+ N + + R +D Sbjct: 58 RVLDIGAGSGLLALMLAQRTDDTVTLDAVELDSQAAEQARENVAASPWAARIQVHDADIQ 117 Query: 157 -WFSSVEGLFDVIVSNPPYIESVIV 180 W +++IVSNPPY + + Sbjct: 118 AWAQQQTQRYELIVSNPPYYDKGVA 142 >gi|288930668|ref|YP_003434728.1| methylase [Ferroglobus placidus DSM 10642] gi|288892916|gb|ADC64453.1| methylase [Ferroglobus placidus DSM 10642] Length = 192 Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust. Identities = 36/151 (23%), Positives = 73/151 (48%), Gaps = 21/151 (13%) Query: 71 TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130 +E ++ELL+++A+ +++ DVV +++G G+G V L + F + DI+ Sbjct: 18 VYEVAEDSELLLEAAM----EEVKEEDVV--IEIGAGSGFVSEKLKGKCKFL--LATDIN 69 Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDF 190 A ++ K + + + +D F ++G F +I+ NPPY+E + +G D+ Sbjct: 70 PHAAKMCKEKGL--------EVVIADLFRGIKGKFTLILFNPPYLELEEEEKVG----DW 117 Query: 191 DPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221 + ++DGG G+ L ++G Sbjct: 118 LEK-AIDGGRGGIEVSVEFLKQAKEKLKENG 147 >gi|91218041|ref|ZP_01254992.1| putative RNA methyltransferase [Psychroflexus torquis ATCC 700755] gi|91183788|gb|EAS70180.1| putative RNA methyltransferase [Psychroflexus torquis ATCC 700755] Length = 184 Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust. Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 8/79 (10%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER------FDTLQ 154 + DL TGTG + + K++ VG++ +A+E AKSNA NG+ L Sbjct: 40 VYDLYTGTGTIAQFVAKKAKHV--VGIESVLEAIEDAKSNAKLNGIENTSFFAGDMKKLF 97 Query: 155 SDWFSSVEGLFDVIVSNPP 173 + F G DVI+++PP Sbjct: 98 NSEFIEKHGQPDVIITDPP 116 >gi|90961485|ref|YP_535401.1| methyltransferase [Lactobacillus salivarius UCC118] gi|227890575|ref|ZP_04008380.1| methyltransferase [Lactobacillus salivarius ATCC 11741] gi|301299660|ref|ZP_07205916.1| methyltransferase small domain protein [Lactobacillus salivarius ACS-116-V-Col5a] gi|90820679|gb|ABD99318.1| Methyltransferase [Lactobacillus salivarius UCC118] gi|227867513|gb|EEJ74934.1| methyltransferase [Lactobacillus salivarius ATCC 11741] gi|300852728|gb|EFK80356.1| methyltransferase small domain protein [Lactobacillus salivarius ACS-116-V-Col5a] Length = 252 Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust. Identities = 32/117 (27%), Positives = 59/117 (50%), Gaps = 13/117 (11%) Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 +++ SS+ F + LL D A + K+ +I+DL G GAV L L + Sbjct: 20 IKIIQSSEVFSFSIDAVLLADFADSL------KKKNSKIVDLCAGNGAVGL-FLSQKVNG 72 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF-----DVIVSNPPY 174 K + V+I + ++A+ + + N + ++ L D ++++GL D++V NPPY Sbjct: 73 KIIQVEIQKRLADMARRSILLNNLEDKITILNED-LNNLQGLISKDSVDMVVCNPPY 128 >gi|332026824|gb|EGI66933.1| N(6)-adenine-specific DNA methyltransferase 1 [Acromyrmex echinatior] Length = 215 Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust. Identities = 31/108 (28%), Positives = 54/108 (50%), Gaps = 7/108 (6%) Query: 72 FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAV--CLALLKESPFFKGVGVDI 129 +EP ++ LLVD AL L + L++G+G+G V LA+ + + + +DI Sbjct: 17 YEPSEDSYLLVD-ALEADLEILHAMKPRICLEIGSGSGIVITALAMALKRHNVQFIAIDI 75 Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYI 175 + A + ++ N V D LQ + + + FD+I+ NPPY+ Sbjct: 76 NPDACRATRRTSLINSVD--VDILQMNLLDCIRIKYTFDIILFNPPYV 121 >gi|319891440|ref|YP_004148315.1| Predicted O-methyltransferase [Staphylococcus pseudintermedius HKU10-03] gi|317161136|gb|ADV04679.1| Predicted O-methyltransferase [Staphylococcus pseudintermedius HKU10-03] gi|323465390|gb|ADX77543.1| conserved hypothetical protein [Staphylococcus pseudintermedius ED99] Length = 241 Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust. Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 7/100 (7%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 D+ L + KRD RILD+ G G + L LL + GV+I + + +A + Sbjct: 29 TDALLLGHFTEVRKRD--RILDMCAGNGVIPL-LLSDKGNNVITGVEIQPQLVNMAVRSV 85 Query: 142 VTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPYIES 177 N + +R ++ D + ++ FD+I NPPY ++ Sbjct: 86 QYNHLEDRITMVEMDINALIQAYSPAQFDLITCNPPYFKA 125 >gi|326332390|ref|ZP_08198668.1| S-adenosylmethionine-dependent methyltransferase [Nocardioidaceae bacterium Broad-1] gi|325949798|gb|EGD41860.1| S-adenosylmethionine-dependent methyltransferase [Nocardioidaceae bacterium Broad-1] Length = 357 Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust. Identities = 24/68 (35%), Positives = 37/68 (54%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 RILD+G G G +AL + P +G+DI ++++A +NA GV +R L D + Sbjct: 179 RILDVGCGGGWSSIALARAYPEATVLGIDIDQPSVDMAVANAREAGVEDRVRFLCQDAAT 238 Query: 160 SVEGLFDV 167 EG D+ Sbjct: 239 VQEGTVDM 246 >gi|312127403|ref|YP_003992277.1| 50S ribosomal protein L11 methyltransferase [Caldicellulosiruptor hydrothermalis 108] gi|311777422|gb|ADQ06908.1| ribosomal protein L11 methyltransferase [Caldicellulosiruptor hydrothermalis 108] Length = 304 Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust. Identities = 25/73 (34%), Positives = 43/73 (58%), Gaps = 7/73 (9%) Query: 101 ILDLGTGTGAVCLALLKESPFF--KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 +LD+GTG+G + +A K F + + VDI A+++A+ NA NGV + ++D Sbjct: 172 VLDVGTGSGILAIAAKK---FLAKRVLAVDIDEVAVKVAEENARLNGV--EIEIKKNDLV 226 Query: 159 SSVEGLFDVIVSN 171 +E FDV+++N Sbjct: 227 EGIEEKFDVVIAN 239 >gi|212224096|ref|YP_002307332.1| 23S rRNA (uracil-5-)-methyltransferase [Thermococcus onnurineus NA1] gi|212009053|gb|ACJ16435.1| 23S rRNA (uracil-5-)-methyltransferase [Thermococcus onnurineus NA1] Length = 419 Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust. Identities = 30/90 (33%), Positives = 48/90 (53%), Gaps = 5/90 (5%) Query: 85 ALAFSLPRIEK-RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143 ALA L +E D R+LDL +G G + L K F GV+++ A+E+A+ NA Sbjct: 267 ALALLLKTVEGFADGERVLDLYSGVGTFGVWLAKRG--FAVEGVELNPFAVEMARKNAEL 324 Query: 144 NGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173 NGV F +++ + G +D ++ +PP Sbjct: 325 NGVDVVFKVGRAE--ETSIGDYDTVIVDPP 352 >gi|149182883|ref|ZP_01861342.1| methyltransferase [Bacillus sp. SG-1] gi|148849386|gb|EDL63577.1| methyltransferase [Bacillus sp. SG-1] Length = 380 Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust. Identities = 23/56 (41%), Positives = 33/56 (58%), Gaps = 3/56 (5%) Query: 125 VGVDISCKALEIAKSNAVTNGVSE--RFDTLQSDWFSSVEGLFDVIVSNPPYIESV 178 +G DI + +E+AKSNA G+ E +F +Q F S + + VIV NPPY E + Sbjct: 256 MGTDIDHRMVEVAKSNAFEAGLGELIQFKQMQVKDFHS-DKSYGVIVGNPPYGERI 310 >gi|254976148|ref|ZP_05272620.1| hypothetical protein CdifQC_12574 [Clostridium difficile QCD-66c26] gi|255093538|ref|ZP_05323016.1| hypothetical protein CdifC_12879 [Clostridium difficile CIP 107932] gi|255315281|ref|ZP_05356864.1| hypothetical protein CdifQCD-7_13052 [Clostridium difficile QCD-76w55] gi|255517949|ref|ZP_05385625.1| hypothetical protein CdifQCD-_12616 [Clostridium difficile QCD-97b34] gi|255651065|ref|ZP_05397967.1| hypothetical protein CdifQCD_12831 [Clostridium difficile QCD-37x79] gi|260684131|ref|YP_003215416.1| hypothetical protein CD196_2397 [Clostridium difficile CD196] gi|260687790|ref|YP_003218924.1| hypothetical protein CDR20291_2444 [Clostridium difficile R20291] gi|306520921|ref|ZP_07407268.1| hypothetical protein CdifQ_14881 [Clostridium difficile QCD-32g58] gi|260210294|emb|CBA64593.1| conserved hypothetical protein [Clostridium difficile CD196] gi|260213807|emb|CBE05773.1| conserved hypothetical protein [Clostridium difficile R20291] Length = 184 Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust. Identities = 28/93 (30%), Positives = 50/93 (53%), Gaps = 13/93 (13%) Query: 100 RILDLGTGTGAV---CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 +LDL GTG++ CL+ +S F VDIS ++++I KSN V L D Sbjct: 44 EVLDLFAGTGSLGIECLSRGAKSCTF----VDISKESIDIVKSNVKKARVESESIILNLD 99 Query: 157 WFSSVEGL------FDVIVSNPPYIESVIVDCL 183 + ++++ L FD+I +PPY +++ ++ + Sbjct: 100 FKTAIDKLKLQNSKFDIIFMDPPYYKNMFIEAI 132 >gi|329667224|gb|AEB93172.1| putative methyltransferase [Lactobacillus johnsonii DPC 6026] Length = 294 Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust. Identities = 28/102 (27%), Positives = 53/102 (51%), Gaps = 8/102 (7%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 + +LD+GTG+G + +A K +G DIS +A+ AK N N + + D +++ Sbjct: 158 MSVLDVGTGSGILAIAASKLGASHV-LGTDISDEAVTAAKENIALNNI-DNIDVRKANLL 215 Query: 159 SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200 ++ +D+IV+N ++ D L + D D ++ +G I Sbjct: 216 KDIDEKYDLIVAN------ILADILLELIPDLDNHLNENGKI 251 >gi|322388270|ref|ZP_08061874.1| type I restriction-modification system DNA-methyltransferase [Streptococcus infantis ATCC 700779] gi|321140942|gb|EFX36443.1| type I restriction-modification system DNA-methyltransferase [Streptococcus infantis ATCC 700779] Length = 533 Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust. Identities = 32/112 (28%), Positives = 54/112 (48%), Gaps = 13/112 (11%) Query: 72 FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV---GVD 128 + P+P +L+ + +AF L R E ++ I D G+G++ L K S + V G + Sbjct: 199 YTPQPVAKLM--TQIAF-LGR-EDQEGFTIYDATMGSGSLLLNAKKYSHKPQTVVYFGQE 254 Query: 129 ISCKALEIAKSNAVTNGVS------ERFDTLQSDWFSSVEGLFDVIVSNPPY 174 ++ +A+ N + +GV DTL DW + FD ++ NPPY Sbjct: 255 LNTSTYNLARMNMILHGVPVENQFLHNADTLDEDWPTQEPTNFDGVLMNPPY 306 >gi|258625579|ref|ZP_05720465.1| Ribosomal RNA small subunit methyltransferase C [Vibrio mimicus VM603] gi|258582132|gb|EEW06995.1| Ribosomal RNA small subunit methyltransferase C [Vibrio mimicus VM603] Length = 340 Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust. Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 2/75 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 +++D+G G G + + K +P + DIS A+ ++ + N + R SD FS Sbjct: 203 KVIDIGCGAGVLGCVMAKLNPNIELEMTDISALAIRSSQETLLANHL--RGTVYPSDMFS 260 Query: 160 SVEGLFDVIVSNPPY 174 + +D +V+NPP+ Sbjct: 261 DTKHKYDYVVTNPPF 275 >gi|303322338|ref|XP_003071162.1| hypothetical protein CPC735_037230 [Coccidioides posadasii C735 delta SOWgp] gi|240110861|gb|EER29017.1| hypothetical protein CPC735_037230 [Coccidioides posadasii C735 delta SOWgp] gi|320040653|gb|EFW22586.1| conserved hypothetical protein [Coccidioides posadasii str. Silveira] Length = 391 Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust. Identities = 51/184 (27%), Positives = 70/184 (38%), Gaps = 61/184 (33%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETE---------LLVDSALAFSLPRIEKRDVVRI 101 + ILG + F + + PRPETE +L + + S P +RI Sbjct: 74 LQYILGDQPFGELDILCRKGVLIPRPETESYTFRTARLILSELRMGSSSP-----APIRI 128 Query: 102 LDLGTGTGAVCLALLKES----PFFKGVGVDISCKALEIAKSNAVTN------------- 144 LDL TGTG + L L P VG+DIS KAL +A+ N N Sbjct: 129 LDLCTGTGCIPLLLHSLLASSIPDLALVGIDISRKALSLARENLEYNISQNHLLPRARQD 188 Query: 145 ---------------GVSERFDTLQS------DWFSSVE---------GLFDVIVSNPPY 174 V D + S D+ S+ + G +DV++SNPPY Sbjct: 189 ISFLQANVLRDEKAELVKREGDAIPSLQAVLADFESAADIRNSRKDLRGQWDVLISNPPY 248 Query: 175 IESV 178 I V Sbjct: 249 ISPV 252 >gi|326776007|ref|ZP_08235272.1| Methyltransferase type 12 [Streptomyces cf. griseus XylebKG-1] gi|326656340|gb|EGE41186.1| Methyltransferase type 12 [Streptomyces cf. griseus XylebKG-1] Length = 511 Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust. Identities = 22/50 (44%), Positives = 30/50 (60%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 R+LDLG G G + LLK+ F + VGVD+S +AL IA + + ER Sbjct: 315 RVLDLGCGQGQLVQELLKDVRFTEIVGVDVSMRALTIASRRLKLDRMGER 364 >gi|238782960|ref|ZP_04626988.1| Ribosomal protein L11 methyltransferase [Yersinia bercovieri ATCC 43970] gi|238716163|gb|EEQ08147.1| Ribosomal protein L11 methyltransferase [Yersinia bercovieri ATCC 43970] Length = 289 Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust. Identities = 39/120 (32%), Positives = 59/120 (49%), Gaps = 18/120 (15%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159 ++D G G+G + +A LK +G+DI +A++ ++ NA NGVSER L D + Sbjct: 157 VIDFGCGSGILAIAALKLG-ATHAIGIDIDPQAIQASRDNAQRNGVSERLALYLAKDQPA 215 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS---LDGGIDGLSH-YRTIADGVSR 215 + DV+V+N L +R+ P IS + GG GLS T A GV+ Sbjct: 216 DLSA--DVVVAN----------ILAGPLRELAPLISVLPVAGGHLGLSGVLATQAAGVAE 263 >gi|254291240|ref|ZP_04962035.1| conserved hypothetical protein [Vibrio cholerae AM-19226] gi|150422804|gb|EDN14756.1| conserved hypothetical protein [Vibrio cholerae AM-19226] Length = 340 Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust. Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 2/75 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 +++D+G G G + + K +P + DIS A+ ++ V N + SD FS Sbjct: 203 KVIDIGCGAGVLGCVMAKLNPHIELEMTDISALAIRSSQETLVANQLHGH--VYPSDMFS 260 Query: 160 SVEGLFDVIVSNPPY 174 +D IV+NPP+ Sbjct: 261 DTGHHYDYIVTNPPF 275 >gi|32455489|ref|NP_862615.1| hypothetical protein pAH82_p16 [Lactococcus lactis subsp. lactis] gi|7767522|gb|AAF69138.1|AF228680_2 HsdM [Lactococcus lactis] gi|9789463|gb|AAF98315.1|AF243383_16 HsdM [Lactococcus lactis subsp. lactis] Length = 537 Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust. Identities = 28/90 (31%), Positives = 41/90 (45%), Gaps = 9/90 (10%) Query: 94 EKRDVVRILDLGTGTGAVCLAL---LKESPFFKGVGVDISCKALEIAKSNAVTNGV-SER 149 E R I D G+G++ L + L G +++ +A+ N + +GV ER Sbjct: 219 ESRAPFHIYDPAMGSGSLMLNIRRYLINPNQVHYHGQELNTTTFNLARMNLILHGVDKER 278 Query: 150 F-----DTLQSDWFSSVEGLFDVIVSNPPY 174 DTL +DW S FD +V NPPY Sbjct: 279 MNLNNGDTLDADWPSEEPYQFDSVVMNPPY 308 >gi|295398035|ref|ZP_06808091.1| site-specific DNA-methyltransferase [Aerococcus viridans ATCC 11563] gi|294973793|gb|EFG49564.1| site-specific DNA-methyltransferase [Aerococcus viridans ATCC 11563] Length = 384 Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust. Identities = 24/55 (43%), Positives = 36/55 (65%), Gaps = 5/55 (9%) Query: 125 VGVDISCKALEIAKSNAVTNGVSER--FDTLQ-SDWFSSVEGLFDVIVSNPPYIE 176 +G DI + +EIAK+NA GV ++ F +Q SD+ ++ E + VIV+NPPY E Sbjct: 256 MGSDIDHRMIEIAKANAEAAGVGDQIEFKQMQLSDFTTNKE--YGVIVANPPYGE 308 >gi|323309835|gb|EGA63039.1| Mtq2p [Saccharomyces cerevisiae FostersO] Length = 221 Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust. Identities = 40/148 (27%), Positives = 72/148 (48%), Gaps = 9/148 (6%) Query: 101 ILDLGTGTGAVCLALLKESPFFKG----VGVDISCKALEIAKSNAVTNGVSERF-DTLQS 155 + ++G+G+G V L++ + + VDI+ ALE A N F + +Q+ Sbjct: 46 VCEIGSGSGIVTTFLMQNKIIPQENSIHLAVDINPWALEATLDTAKLNSCKSSFLEVIQA 105 Query: 156 DWFSSV-EGLFDVIVSNPPYIESVIV-DCLG-LEVRDFDPRISLDGGIDGLSHYRTIADG 212 D SS+ DV++ NPPY+ + V D G E D ++L GG DG++ + Sbjct: 106 DLNSSIRNNQVDVLIFNPPYVPAECVPDVPGSREEADQWLDLALLGGKDGMAITDKLLRQ 165 Query: 213 VSRHLNKDGLCSVEI-GYNQKVDVVRIF 239 + + L+ DG+ + N+ +V++ F Sbjct: 166 LEQILSPDGVAYILFCARNKPKEVIKRF 193 >gi|313113033|ref|ZP_07798671.1| type I restriction-modification system, M subunit [Faecalibacterium cf. prausnitzii KLE1255] gi|310624647|gb|EFQ07964.1| type I restriction-modification system, M subunit [Faecalibacterium cf. prausnitzii KLE1255] Length = 848 Score = 39.7 bits (91), Expect = 0.41, Method: Composition-based stats. Identities = 33/123 (26%), Positives = 61/123 (49%), Gaps = 25/123 (20%) Query: 77 ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136 E LL+ +A+ L + R+ ++I D +G+G++ + + + + + G G +I A E+ Sbjct: 192 EVSLLMSEIVAYHL---KDREEIKIYDPTSGSGSLLINIGQCAARYMGNGNNIKYYAQEL 248 Query: 137 AKS-------NAVTNG------VSERFDTLQSDW--------FSSVEGLF-DVIVSNPPY 174 ++ N V G V+ DTL+ DW ++ + LF D +VSNPPY Sbjct: 249 KENTYNLTRMNLVMRGILPDNIVTRNGDTLEEDWPYFEENDPVNTYDPLFVDAVVSNPPY 308 Query: 175 IES 177 ++ Sbjct: 309 SQA 311 >gi|229520914|ref|ZP_04410336.1| ribosomal RNA small subunit methyltransferase C [Vibrio cholerae TM 11079-80] gi|229342147|gb|EEO07143.1| ribosomal RNA small subunit methyltransferase C [Vibrio cholerae TM 11079-80] Length = 340 Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust. Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 2/75 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 +++D+G G G + + K +P + DIS A+ ++ V N + SD FS Sbjct: 203 KVIDIGCGAGVLGCVMAKLNPHIELEMTDISALAIRSSQETLVANQLHGH--VYPSDMFS 260 Query: 160 SVEGLFDVIVSNPPY 174 +D IV+NPP+ Sbjct: 261 DTGHHYDYIVTNPPF 275 >gi|212544758|ref|XP_002152533.1| conserved hypothetical protein [Penicillium marneffei ATCC 18224] gi|210065502|gb|EEA19596.1| conserved hypothetical protein [Penicillium marneffei ATCC 18224] Length = 335 Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust. Identities = 55/205 (26%), Positives = 87/205 (42%), Gaps = 44/205 (21%) Query: 18 SSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV---------RLTLS 68 S + IVD S DDR + +++ K+E+ R +RD + RL L Sbjct: 24 SDNSDIVDTSSTFDDRTTIV---SSIKNYKYENGRRYHSFRDGEYLLPNDEREQERLDLL 80 Query: 69 SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128 TF LL++ L R + VR+LD GTGTG + +E+P + +G D Sbjct: 81 HHTFR------LLLNGELY----RAPLSNPVRVLDFGTGTGVWAIDFAEENPRTEVLGTD 130 Query: 129 ISCKALEIAKSNAVTNGVSERF--DTLQSDWFSSVEGLFDVI--------VSNPPYIESV 178 +S SN RF D ++S+W + FD I + + + + Sbjct: 131 LSPIQPSWFPSNC-------RFEVDDVESEWLYGYQS-FDYIHCRGMTGSIRDWQKLFAQ 182 Query: 179 IVDCL----GLEVRDFDPRISLDGG 199 VD L +EV++++ IS D G Sbjct: 183 AVDNLQPGGWMEVQEYEIEISSDDG 207 >gi|324993433|gb|EGC25353.1| ribosomal RNA small subunit methyltransferase D [Streptococcus sanguinis SK405] gi|327461707|gb|EGF08038.1| ribosomal RNA small subunit methyltransferase D [Streptococcus sanguinis SK1] gi|327489560|gb|EGF21353.1| ribosomal RNA small subunit methyltransferase D [Streptococcus sanguinis SK1058] Length = 182 Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust. Identities = 35/131 (26%), Positives = 58/131 (44%), Gaps = 16/131 (12%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+LDL G+G++ + + V V+ +A I N ERFD L+ + Sbjct: 47 RVLDLYAGSGSLAIEAISRG-MEAAVLVEKDRRAQAIISENIQMTKEPERFDLLKMESGR 105 Query: 160 SVE---GLFDVIVSNPPYI-ESVIVDCLGLEVRDF-----------DPRISLDGGIDGLS 204 ++E G FD+++ +PPY E ++ D LE R D + L I GL Sbjct: 106 ALEMLTGSFDLVLLDPPYAKEQIVEDLEKLEERQLLGQDVLVVCETDKEVELPEEIAGLG 165 Query: 205 HYRTIADGVSR 215 ++ G+S+ Sbjct: 166 IWKQKIYGISK 176 >gi|296390860|ref|ZP_06880335.1| hypothetical protein PaerPAb_22015 [Pseudomonas aeruginosa PAb1] Length = 221 Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust. Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 5/94 (5%) Query: 90 LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 L + +R R+LD+G G G +C AL E + VG+D S + +E+A+ A G R Sbjct: 39 LQALRQRAPRRLLDIGCGEGWLCRALAGE--VGECVGIDASPELIELAR--AAGGGSFRR 94 Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183 + D S + G FD +V N ++ + CL Sbjct: 95 LAYRELDAASGL-GRFDALVCNFSLLDEDLAGCL 127 >gi|261380685|ref|ZP_05985258.1| methyltransferase domain protein [Neisseria subflava NJ9703] gi|284796395|gb|EFC51742.1| methyltransferase domain protein [Neisseria subflava NJ9703] Length = 371 Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust. Identities = 31/125 (24%), Positives = 56/125 (44%), Gaps = 14/125 (11%) Query: 97 DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 ++ D+GTG+G + A+L + + D + KA+ A +N G+ + + D Sbjct: 192 NIQTAFDIGTGSGVIA-AILAKRGIPDIIATDTNPKAIACAIANLERLGLDKAVNIQSID 250 Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216 F E D+IV NPP++ + +E +DP ++ +GV +H Sbjct: 251 LFP--ETCADLIVCNPPWLPAKPTS--AIETALYDPNHAM---------LTAFLNGVRQH 297 Query: 217 LNKDG 221 LN +G Sbjct: 298 LNPNG 302 >gi|49475201|ref|YP_033242.1| 3-demethylubiquinone-9 3-methyltransferase [Bartonella henselae str. Houston-1] gi|57013201|sp|Q6G5K3|UBIG_BARHE RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName: Full=3,4-dihydroxy-5-hexaprenylbenzoate methyltransferase; Short=DHHB methyltransferase gi|49238006|emb|CAF27211.1| 3-demethylubiquinone-93-methyltransferase [Bartonella henselae str. Houston-1] Length = 247 Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust. Identities = 22/72 (30%), Positives = 40/72 (55%), Gaps = 2/72 (2%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 ++ILD+G G G +C + + VG D S +E+AK +A NG+S + T ++ Sbjct: 66 LKILDIGCGGGLLCEPMARLGAMV--VGADASQTNIEVAKIHAAQNGLSIDYRTTTAEAL 123 Query: 159 SSVEGLFDVIVS 170 ++ FD+I++ Sbjct: 124 ATEGEQFDIILN 135 >gi|305665426|ref|YP_003861713.1| hypothetical protein FB2170_03980 [Maribacter sp. HTCC2170] gi|88710181|gb|EAR02413.1| hypothetical protein FB2170_03980 [Maribacter sp. HTCC2170] Length = 237 Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust. Identities = 36/135 (26%), Positives = 62/135 (45%), Gaps = 12/135 (8%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS---DW 157 ILD+GTGTG + L + S +++ A E N + +R + ++ Sbjct: 41 ILDIGTGTGLIALMAAQRSEAETIDAIEVEEGAYEQCVDNFEASPWGDRLFCYHAGLDEF 100 Query: 158 FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217 +E +D+IVSNPP+ + G RD R + D L DGVS+ L Sbjct: 101 VDEIEDKYDLIVSNPPFYAEDVTS--GNNARD-KARQNQSLPFDEL------IDGVSKLL 151 Query: 218 NKDGLCSVEIGYNQK 232 +++G+ +V + Y ++ Sbjct: 152 SQNGVFTVIVPYKEE 166 >gi|319941749|ref|ZP_08016071.1| ribosomal protein L11 methyltransferase [Sutterella wadsworthensis 3_1_45B] gi|319804682|gb|EFW01549.1| ribosomal protein L11 methyltransferase [Sutterella wadsworthensis 3_1_45B] Length = 298 Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust. Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 9/74 (12%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+LD G GTG + + K+ + G DI +A+E A+ NA+ N V +F W Sbjct: 166 RVLDYGCGTGILAIGA-KKLGAAEVCGTDIDPQAVEAARDNAIRNDVEAQF------WLP 218 Query: 160 S--VEGLFDVIVSN 171 + EG F ++V+N Sbjct: 219 ADMPEGTFSIVVAN 232 >gi|315608028|ref|ZP_07883021.1| ribosomal protein L11 methyltransferase [Prevotella buccae ATCC 33574] gi|315250497|gb|EFU30493.1| ribosomal protein L11 methyltransferase [Prevotella buccae ATCC 33574] Length = 288 Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust. Identities = 34/96 (35%), Positives = 48/96 (50%), Gaps = 10/96 (10%) Query: 78 TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137 T ++V + L L D RILD G GTG + +A K + VG DI ++E Sbjct: 139 TRMMVSTLLNMDL------DGKRILDCGCGTGILGIAAAKMGA-REVVGYDIDEWSVENT 191 Query: 138 KSNAVTNGVSERFDTLQSDW--FSSVEGLFDVIVSN 171 + NA N V E F+ D + V GLFDV+++N Sbjct: 192 RHNAELNHV-ENFEVYHGDAHVLNHVNGLFDVVLAN 226 >gi|301169123|emb|CBW28720.1| predicted S-adenosyl-L-methionine-dependent methyltransferase [Haemophilus influenzae 10810] Length = 240 Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust. Identities = 26/84 (30%), Positives = 42/84 (50%), Gaps = 4/84 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD--- 156 ILD+G GTG + L L + + + V++ A + A+ N + R +Q+D Sbjct: 47 ILDMGCGTGLLALMLAQRTEENCQIQAVELDPIAAKQAQENINDSVWKNRIQLIQTDIQH 106 Query: 157 WFSSVEGLFDVIVSNPPYIESVIV 180 + + FD+IV+NPPY E I Sbjct: 107 FLQTTAQTFDLIVANPPYFEQGIA 130 >gi|295687569|ref|YP_003591262.1| cyclopropane-fatty-acyl-phospholipid synthase [Caulobacter segnis ATCC 21756] gi|295429472|gb|ADG08644.1| Cyclopropane-fatty-acyl-phospholipid synthase [Caulobacter segnis ATCC 21756] Length = 393 Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust. Identities = 47/192 (24%), Positives = 83/192 (43%), Gaps = 30/192 (15%) Query: 57 WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSL--PRIEKRDVVRILDLGTGTGAVCLA 114 +R F + + S FE RP+ L A +L ++ + ++ LD+G+G G + + Sbjct: 126 YRRFLDADMQYSCAYFE-RPDMTLEEAQAAKKALIGRKLLIQPGMKTLDIGSGWGGLSMT 184 Query: 115 LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174 L K+ + GV +S + L +AK A T G+ +R D +D + + FD IVS Sbjct: 185 LAKDFGA-RMTGVTLSTEQLALAKERAETAGLGDRIDFRLTD-YRDLNEPFDRIVS-VGM 241 Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE-IGYNQKV 233 +E V G +++T D ++R L++DG+ + IG Sbjct: 242 LEHV-----------------------GAPNFQTYFDTIARLLDEDGVALIHSIGKMHGP 278 Query: 234 DVVRIFESRKLF 245 F + +F Sbjct: 279 GATNAFTQKYIF 290 >gi|255326733|ref|ZP_05367809.1| methyltransferase small [Rothia mucilaginosa ATCC 25296] gi|255295950|gb|EET75291.1| methyltransferase small [Rothia mucilaginosa ATCC 25296] Length = 583 Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust. Identities = 29/92 (31%), Positives = 41/92 (44%), Gaps = 12/92 (13%) Query: 94 EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS------ 147 E+ V R LD+GTG G LL + DIS +AL + N + N + Sbjct: 180 ERTPVKRALDVGTGCGIQTFHLLAHAEHV--TATDISERALAFTRFNLLLNAQALNIDPQ 237 Query: 148 ---ERFDTLQSDWFSSVEG-LFDVIVSNPPYI 175 R + V G LFD++VSNPP++ Sbjct: 238 NPQARVSLREGSLLEPVAGELFDLVVSNPPFV 269 >gi|239621147|ref|ZP_04664178.1| conserved hypothetical protein [Bifidobacterium longum subsp. infantis CCUG 52486] gi|239515608|gb|EEQ55475.1| conserved hypothetical protein [Bifidobacterium longum subsp. infantis CCUG 52486] Length = 218 Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust. Identities = 30/87 (34%), Positives = 41/87 (47%), Gaps = 16/87 (18%) Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 LDLG G G + L L ESP VD++ +A+++ +NA NG + T Q D S+ Sbjct: 63 LDLGCGWGPIALTLAFESPEANVWAVDVNERAVDLTHANAQANGHT-NIHTAQVDESSTP 121 Query: 162 ---------------EGLFDVIVSNPP 173 + FDVI SNPP Sbjct: 122 LPAENQPAFCETVPSDLTFDVIWSNPP 148 >gi|145483771|ref|XP_001427908.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124394991|emb|CAK60510.1| unnamed protein product [Paramecium tetraurelia] Length = 460 Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust. Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 4/77 (5%) Query: 96 RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155 ++ V I DLG G G + L KE + +GV+I K +E+AK N + V+ D + + Sbjct: 143 KEFVIITDLGCGVGGNTVQLAKECHYV--IGVEIESKLIELAKKNCHHSRVN--VDLINA 198 Query: 156 DWFSSVEGLFDVIVSNP 172 D F+ DVI NP Sbjct: 199 DIFTLNNLKTDVIFVNP 215 >gi|330835849|ref|YP_004410577.1| putative methylase [Metallosphaera cuprina Ar-4] gi|329567988|gb|AEB96093.1| putative methylase [Metallosphaera cuprina Ar-4] Length = 199 Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust. Identities = 35/123 (28%), Positives = 63/123 (51%), Gaps = 15/123 (12%) Query: 56 GWRDF--YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113 G+R F +L L + +EP ++ELL S+ +EK + +LD+G+G+G L Sbjct: 3 GYRYFSYLGYKLCLDDNVYEPAEDSELLA------SILDLEKGE--SVLDVGSGSG--IL 52 Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNP 172 ++ S + + VDI+ A + + +A N + D L D + + + FD ++ NP Sbjct: 53 GIVAHSLGARVISVDINPFASLVTQCSARLNNID--IDVLNCDLTTCLRDVAFDSVIFNP 110 Query: 173 PYI 175 PY+ Sbjct: 111 PYL 113 >gi|319940773|ref|ZP_08015113.1| PUA domain-containing protein [Sutterella wadsworthensis 3_1_45B] gi|319805793|gb|EFW02569.1| PUA domain-containing protein [Sutterella wadsworthensis 3_1_45B] Length = 401 Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust. Identities = 30/85 (35%), Positives = 45/85 (52%), Gaps = 7/85 (8%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 +R L+ TG LALLK + V VD S +AL +A++NA NG + R + L D F Sbjct: 227 LRALNCFCYTGGFSLALLKGGAE-EVVSVDSSEEALAMARANAERNGFTNRAEWLCEDVF 285 Query: 159 SSVEGL------FDVIVSNPPYIES 177 + + L FD+++ +PP S Sbjct: 286 TCLRRLRDAGEKFDLVILDPPKFAS 310 >gi|227533323|ref|ZP_03963372.1| type I site-specific deoxyribonuclease [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|227189042|gb|EEI69109.1| type I site-specific deoxyribonuclease [Lactobacillus paracasei subsp. paracasei ATCC 25302] Length = 538 Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust. Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 9/88 (10%) Query: 96 RDVVRILDLGTGTGAVCLAL---LKESPFFKGVGVDISCKALEIAKSNAVTNGVS----- 147 + V I D G+G++ L + +++ G +++ +A+ N + +GVS Sbjct: 230 KQVRTIYDPAVGSGSLLLNVGQHVQDPNLVSYHGQELNTTTYNLARMNLMLHGVSYDDMH 289 Query: 148 -ERFDTLQSDWFSSVEGLFDVIVSNPPY 174 DTL DW LFD +V NPPY Sbjct: 290 LRNGDTLSKDWPVDEPYLFDAVVMNPPY 317 >gi|56609587|gb|AAW03320.1| hypothetical protein [Cystobacter fuscus] Length = 185 Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust. Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 9/91 (9%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVG-VDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 R+LDL GTGA+ L + KGV VD +AL + ++N T G S R + L Sbjct: 46 RVLDLYAGTGALGLEAVSRGA--KGVVLVDSDREALALCRANTDTLGFSARVEVLAQPVA 103 Query: 159 SSVEGL------FDVIVSNPPYIESVIVDCL 183 ++E L F +I ++PPY V+ L Sbjct: 104 RALETLGRRGDRFQLIFADPPYAARVVETVL 134 >gi|6320344|ref|NP_010424.1| Mtq2p [Saccharomyces cerevisiae S288c] gi|74676352|sp|Q03920|MTQ2_YEAST RecName: Full=eRF1 methyltransferase catalytic subunit MTQ2; Short=eRF1 MTase catalytic subunit MTQ2; AltName: Full=N(5)-glutamine methyltransferase MTQ2 gi|665673|emb|CAA88222.1| unknown [Saccharomyces cerevisiae] gi|45269245|gb|AAS56002.1| YDR140W [Saccharomyces cerevisiae] gi|151942124|gb|EDN60480.1| methyltransferase [Saccharomyces cerevisiae YJM789] gi|190404901|gb|EDV08168.1| conserved hypothetical protein [Saccharomyces cerevisiae RM11-1a] gi|207346679|gb|EDZ73106.1| YDR140Wp-like protein [Saccharomyces cerevisiae AWRI1631] gi|256274421|gb|EEU09324.1| Mtq2p [Saccharomyces cerevisiae JAY291] gi|259145381|emb|CAY78645.1| Mtq2p [Saccharomyces cerevisiae EC1118] gi|285811159|tpg|DAA11983.1| TPA: Mtq2p [Saccharomyces cerevisiae S288c] gi|323305651|gb|EGA59392.1| Mtq2p [Saccharomyces cerevisiae FostersB] gi|323338288|gb|EGA79519.1| Mtq2p [Saccharomyces cerevisiae Vin13] gi|323349311|gb|EGA83538.1| Mtq2p [Saccharomyces cerevisiae Lalvin QA23] gi|323355726|gb|EGA87542.1| Mtq2p [Saccharomyces cerevisiae VL3] Length = 221 Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust. Identities = 40/148 (27%), Positives = 72/148 (48%), Gaps = 9/148 (6%) Query: 101 ILDLGTGTGAVCLALLKESPFFKG----VGVDISCKALEIAKSNAVTNGVSERF-DTLQS 155 + ++G+G+G V L++ + + VDI+ ALE A N F + +Q+ Sbjct: 46 VCEIGSGSGIVTTFLMQNKIIPQENSIHLAVDINPWALEATLDTAKLNSCKSSFLEVIQA 105 Query: 156 DWFSSV-EGLFDVIVSNPPYIESVIV-DCLG-LEVRDFDPRISLDGGIDGLSHYRTIADG 212 D SS+ DV++ NPPY+ + V D G E D ++L GG DG++ + Sbjct: 106 DLNSSIRNNQVDVLIFNPPYVPAECVPDVPGSREEADQWLDLALLGGKDGMAITDKLLRQ 165 Query: 213 VSRHLNKDGLCSVEI-GYNQKVDVVRIF 239 + + L+ DG+ + N+ +V++ F Sbjct: 166 LEQILSPDGVAYILFCARNKPKEVIKRF 193 >gi|116048706|ref|YP_792494.1| hypothetical protein PA14_54050 [Pseudomonas aeruginosa UCBPP-PA14] gi|115583927|gb|ABJ09942.1| conserved hypothetical protein [Pseudomonas aeruginosa UCBPP-PA14] Length = 221 Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust. Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 5/94 (5%) Query: 90 LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 L + +R R+LD+G G G +C AL E + VG+D S + +E+A+ A G R Sbjct: 39 LQALRQRAPRRLLDIGCGEGWLCRALAGE--VGECVGIDASPELIELAR--AAGGGSFRR 94 Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183 + D S + G FD +V N ++ + CL Sbjct: 95 LAYRELDAASGL-GRFDALVCNFSLLDEDLAGCL 127 >gi|315222012|ref|ZP_07863923.1| methylase family protein [Streptococcus anginosus F0211] gi|315188978|gb|EFU22682.1| methylase family protein [Streptococcus anginosus F0211] Length = 393 Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust. Identities = 30/79 (37%), Positives = 39/79 (49%), Gaps = 13/79 (16%) Query: 110 AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-------RFDTLQSDWFSSVE 162 A L +K+ +G DI + +EIAK NA GVSE R L +D + Sbjct: 254 ARALGQIKQDIQLDILGTDIDARMVEIAKRNAEEAGVSEQIVFKQMRLQDLHTD---KIN 310 Query: 163 GLFDVIVSNPPYIESVIVD 181 G VIVSNPPY E ++ D Sbjct: 311 G---VIVSNPPYGERLLDD 326 >gi|307288976|ref|ZP_07568944.1| N-6 DNA Methylase [Enterococcus faecalis TX0109] gi|306500067|gb|EFM69416.1| N-6 DNA Methylase [Enterococcus faecalis TX0109] Length = 343 Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust. Identities = 29/107 (27%), Positives = 48/107 (44%), Gaps = 9/107 (8%) Query: 94 EKRDVVRILDLGTGTGAVCLAL---LKESPFFKGVGVDISCKALEIAKSNAVTNGV-SER 149 ++R + D G+G++ L + L K G +++ +AK N + +GV +E Sbjct: 27 KERPFFSVFDPTMGSGSLMLNVRNYLTHPDNVKYHGQELNTTTYNLAKMNLILHGVDAEE 86 Query: 150 F-----DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFD 191 DTL DW + FD +V NPPY + D L+ F+ Sbjct: 87 MNLRNGDTLNKDWPTDEPYTFDAVVMNPPYSANWSADTTFLDDSRFN 133 >gi|260557187|ref|ZP_05829403.1| ribosomal RNA small subunit methyltransferase C [Acinetobacter baumannii ATCC 19606] gi|260409293|gb|EEX02595.1| ribosomal RNA small subunit methyltransferase C [Acinetobacter baumannii ATCC 19606] Length = 337 Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust. Identities = 34/135 (25%), Positives = 55/135 (40%), Gaps = 3/135 (2%) Query: 47 KHESIHRILGWRDFYNVRLTLSSDTFEPRPE--TELLVDSALAFSLPRIEKRDVVRILDL 104 K E I + W Y V++ T P ++ +D+ A LP + + RI D Sbjct: 142 KTEKIKPLESWLKTYTVQVNEQELTICALPGVFSQTHLDAGTAVLLPYLNQVKSGRIADF 201 Query: 105 GTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV-SERFDTLQSDWFSSVEG 163 G G G + L K + +DI AL+ + NG+ S++ + Sbjct: 202 GCGAGIISCYLAKANSSNIIHALDIDAFALQSTEMTFSRNGIGSDQLRLQPVTGIADAPT 261 Query: 164 LFDVIVSNPPYIESV 178 D IVSNPP+ + + Sbjct: 262 ELDAIVSNPPFHQGI 276 >gi|257889088|ref|ZP_05668741.1| type I restriction-modification system M subunit [Enterococcus faecium 1,141,733] gi|257825160|gb|EEV52074.1| type I restriction-modification system M subunit [Enterococcus faecium 1,141,733] Length = 512 Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust. Identities = 26/90 (28%), Positives = 43/90 (47%), Gaps = 9/90 (10%) Query: 94 EKRDVVRILDLGTGTGAVCLAL---LKESPFFKGVGVDISCKALEIAKSNAVTNGV-SER 149 ++R + D G+G++ L + L + K G +++ +AK N + +GV +E Sbjct: 196 KERRFFSVFDPTMGSGSLMLNVRNYLTHTDNVKYHGQELNTTTYNLAKMNLILHGVDAEE 255 Query: 150 F-----DTLQSDWFSSVEGLFDVIVSNPPY 174 DTL DW + FD +V NPPY Sbjct: 256 MNLRNGDTLNKDWPTDEPYTFDAVVMNPPY 285 >gi|254496396|ref|ZP_05109277.1| 3-demethylubiquinone-9 3-methyltransferase [Legionella drancourtii LLAP12] gi|254354387|gb|EET13041.1| 3-demethylubiquinone-9 3-methyltransferase [Legionella drancourtii LLAP12] Length = 230 Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust. Identities = 34/124 (27%), Positives = 56/124 (45%), Gaps = 16/124 (12%) Query: 70 DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129 DT P + ++ L F + DV +LD+G G G +C A+ K K G+D Sbjct: 24 DTEGPLKTLHDINETRLQFIAQHVNLTDV-SVLDIGCGGGILCEAMAKSGA--KVTGIDA 80 Query: 130 SCKALEIAKSNAVTNGVS--------ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181 C+A++ A+ +A +N ++ E + Q D + +E L V Y E V+ Sbjct: 81 ECEAIQAAQEHAKSNDLAIDYFCTPVETYKNKQYDVITCMEMLEHV-----EYPEIVLEH 135 Query: 182 CLGL 185 C+ L Sbjct: 136 CIRL 139 >gi|2689699|gb|AAB91416.1| modification subunit [Lactococcus lactis subsp. lactis bv. diacetylactis] Length = 531 Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust. Identities = 28/90 (31%), Positives = 41/90 (45%), Gaps = 9/90 (10%) Query: 94 EKRDVVRILDLGTGTGAVCLAL---LKESPFFKGVGVDISCKALEIAKSNAVTNGV-SER 149 E R I D G+G++ L + L G +++ +A+ N + +GV ER Sbjct: 213 ESRAPFHIYDPAMGSGSLMLNIRRYLLNPNQVHYHGQELNTTTFNLARMNLILHGVDKER 272 Query: 150 F-----DTLQSDWFSSVEGLFDVIVSNPPY 174 DTL +DW S FD +V NPPY Sbjct: 273 MNLNNGDTLDADWPSEEPYQFDSVVMNPPY 302 >gi|54294134|ref|YP_126549.1| hypothetical protein lpl1198 [Legionella pneumophila str. Lens] gi|53753966|emb|CAH15437.1| hypothetical protein lpl1198 [Legionella pneumophila str. Lens] gi|307609945|emb|CBW99473.1| hypothetical protein LPW_12461 [Legionella pneumophila 130b] Length = 390 Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust. Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 2/75 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWF 158 R+LDL T TG L K VD S +A+E AK+NAV N ++ F + + Sbjct: 223 RVLDLYTFTGGFALHAAKAGALHV-TAVDSSAQAIEQAKNNAVLNHLNTIEFIKADAREY 281 Query: 159 SSVEGLFDVIVSNPP 173 + G +DV++ +PP Sbjct: 282 LKMAGEYDVVILDPP 296 >gi|313105613|ref|ZP_07791879.1| hypothetical protein PA39016_000080049 [Pseudomonas aeruginosa 39016] gi|310878381|gb|EFQ36975.1| hypothetical protein PA39016_000080049 [Pseudomonas aeruginosa 39016] Length = 221 Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust. Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 5/94 (5%) Query: 90 LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 L + +R R+LD+G G G +C AL E + VG+D S + +E+A+ A G R Sbjct: 39 LQALRQRAPRRLLDIGCGEGWLCRALAGE--VGECVGIDASPELIELAR--AAGGGSFRR 94 Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183 + D S + G FD +V N ++ + CL Sbjct: 95 LAYRELDAASGL-GRFDALVCNFSLLDEDLAGCL 127 >gi|291276853|ref|YP_003516625.1| hypothetical protein HMU06260 [Helicobacter mustelae 12198] gi|290964047|emb|CBG39887.1| Putative hypothetical protein [Helicobacter mustelae 12198] Length = 258 Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust. Identities = 34/102 (33%), Positives = 49/102 (48%), Gaps = 8/102 (7%) Query: 83 DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF-FKGVGVDISCKALEIAKSNA 141 DS ++ R R +LD+G G+G L LL F V+ +A+ NA Sbjct: 20 DSLFLYAFARNFLRKKFSLLDVGAGSGI--LGLLCARDFAISATLVEKDAHNAFLAQQNA 77 Query: 142 VTNGVSERFDTLQSDW--FSSVEGLFDVIVSNPPYIESVIVD 181 TN + + Q D+ F S E +DVI+SNPP+ S I+D Sbjct: 78 ATNQLEA--EVYQGDFLDFCSSER-YDVILSNPPFYRSEILD 116 >gi|257460669|ref|ZP_05625770.1| methyltransferase small [Campylobacter gracilis RM3268] gi|257442000|gb|EEV17142.1| methyltransferase small [Campylobacter gracilis RM3268] Length = 413 Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust. Identities = 31/84 (36%), Positives = 47/84 (55%), Gaps = 11/84 (13%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGV---DISCKALEIAKSNAVTNGVSERFDTLQSDW 157 +LD+G G G + L L ++ FK + + +I + LEI K N+ NG++ + L +D+ Sbjct: 215 VLDVGAGCGILGLLLKRD---FKSINLSLLEIQERNLEILKLNSSQNGLAA--EILHADF 269 Query: 158 --FSSVEGLFDVIVSNPPYIESVI 179 F S E FD IVSNPP+ I Sbjct: 270 AEFKS-EKRFDFIVSNPPFYRERI 292 >gi|46019874|emb|CAE52400.1| putative restriction-modification enzyme type I M subunit [Streptococcus thermophilus] Length = 537 Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust. Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 9/90 (10%) Query: 94 EKRDVVRILDLGTGTGAVCLALLKESPFFKGV---GVDISCKALEIAKSNAVTNGV-SER 149 E R I D G+G++ L + + V G +++ +A+ N + +GV ER Sbjct: 219 ESRVPFHIYDPAMGSGSLMLNIRRYLIHPNQVHYHGQELNTTTFNLARMNLILHGVDKER 278 Query: 150 F-----DTLQSDWFSSVEGLFDVIVSNPPY 174 DTL +DW S FD +V NPPY Sbjct: 279 MNLNNGDTLDADWPSEEPYQFDSVVMNPPY 308 >gi|324990698|gb|EGC22634.1| ribosomal RNA small subunit methyltransferase D [Streptococcus sanguinis SK353] Length = 182 Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust. Identities = 34/131 (25%), Positives = 57/131 (43%), Gaps = 16/131 (12%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD--- 156 R+LDL G+G++ + + V V+ +A I N ERFD L+ + Sbjct: 47 RVLDLYAGSGSLAIEAISRG-METAVLVEKDRRAQAIISENIQMTKELERFDLLKMESGR 105 Query: 157 WFSSVEGLFDVIVSNPPYI-ESVIVDCLGLEVRDF-----------DPRISLDGGIDGLS 204 ++ G FD+++ +PPY E ++ D LE R D + L I GL Sbjct: 106 ALDTLTGAFDLVLLDPPYAKEQIVADLEKLEERQLLSQDVLVVCETDKEVELPEEIAGLG 165 Query: 205 HYRTIADGVSR 215 ++ G+S+ Sbjct: 166 IWKQKIYGISK 176 >gi|297183728|gb|ADI19852.1| methylase of polypeptide chain release factors [uncultured alpha proteobacterium EB000_46D07] Length = 71 Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust. Identities = 25/51 (49%), Positives = 35/51 (68%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 +R+LDLGTG+G + LALL E P GVG+DI+ AL A+ NA + + +R Sbjct: 1 MRLLDLGTGSGCLLLALLSELPEAYGVGIDINSDALATARCNAASLNLGDR 51 >gi|262172301|ref|ZP_06039979.1| 16S RNA G1207 methylase RsmC [Vibrio mimicus MB-451] gi|261893377|gb|EEY39363.1| 16S RNA G1207 methylase RsmC [Vibrio mimicus MB-451] Length = 340 Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust. Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 2/75 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 +++D+G G G + + K +P + DIS A+ ++ + N + R SD FS Sbjct: 203 KVIDIGCGAGVLGCVMAKLNPNIELEMTDISALAIRSSQETLLANQL--RGTVYPSDMFS 260 Query: 160 SVEGLFDVIVSNPPY 174 + +D +V+NPP+ Sbjct: 261 DTKHKYDYVVTNPPF 275 >gi|153217439|ref|ZP_01951181.1| conserved hypothetical protein [Vibrio cholerae 1587] gi|124113552|gb|EAY32372.1| conserved hypothetical protein [Vibrio cholerae 1587] Length = 340 Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust. Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 2/75 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 +++D+G G G + + K +P + DIS A+ ++ V N + SD FS Sbjct: 203 KVIDIGCGAGVLGCVMAKLNPHIELEMTDISALAIRSSQETLVANQLHGH--VYPSDMFS 260 Query: 160 SVEGLFDVIVSNPPY 174 +D IV+NPP+ Sbjct: 261 DTGHHYDYIVTNPPF 275 >gi|23465867|ref|NP_696470.1| hypothetical protein BL1306 [Bifidobacterium longum NCC2705] gi|227547538|ref|ZP_03977587.1| possible 16S rRNA methyltransferase [Bifidobacterium longum subsp. infantis ATCC 55813] gi|317483527|ref|ZP_07942511.1| methyltransferase small domain-containing protein [Bifidobacterium sp. 12_1_47BFAA] gi|23326568|gb|AAN25106.1| conserved hypothetical protein possibly in upfoo20 [Bifidobacterium longum NCC2705] gi|227211948|gb|EEI79844.1| possible 16S rRNA methyltransferase [Bifidobacterium longum subsp. infantis ATCC 55813] gi|316915017|gb|EFV36455.1| methyltransferase small domain-containing protein [Bifidobacterium sp. 12_1_47BFAA] Length = 218 Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust. Identities = 30/87 (34%), Positives = 41/87 (47%), Gaps = 16/87 (18%) Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 LDLG G G + L L ESP VD++ +A+++ +NA NG + T Q D S+ Sbjct: 63 LDLGCGWGPIALTLAFESPEANVWAVDVNERAVDLTHANAQANGHT-NIHTAQVDESSTP 121 Query: 162 ---------------EGLFDVIVSNPP 173 + FDVI SNPP Sbjct: 122 LPAENQPAFCETVPSDLTFDVIWSNPP 148 >gi|322804332|emb|CBZ01882.1| predicted O-methyltransferase [Clostridium botulinum H04402 065] Length = 246 Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust. Identities = 24/98 (24%), Positives = 50/98 (51%), Gaps = 8/98 (8%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 +D+ L + P I ++ +++DL +GTG + L ++ +G++I + ++AK + Sbjct: 32 IDAVLLANFPTI--KNGAKVVDLCSGTGIISFILAGKTNASNIIGIEIQKEIADMAKRSI 89 Query: 142 VTNGVSERFDTLQSD-----WFSSVEGLFDVIVSNPPY 174 N + E+ ++ D +E + DV+ NPPY Sbjct: 90 KYNNLQEKVRFIEGDLKNLKLLKDIEKV-DVVTVNPPY 126 >gi|296106821|ref|YP_003618521.1| Predicted SAM-dependent methyltransferase [Legionella pneumophila 2300/99 Alcoy] gi|295648722|gb|ADG24569.1| Predicted SAM-dependent methyltransferase [Legionella pneumophila 2300/99 Alcoy] Length = 390 Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust. Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 2/75 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWF 158 R+LDL T TG L K VD S +A+E AK+NAV N ++ F + + Sbjct: 223 RVLDLYTFTGGFALHAAKAGALHV-TAVDSSAQAIEQAKNNAVLNHLNTIEFIKADAREY 281 Query: 159 SSVEGLFDVIVSNPP 173 + G +DV++ +PP Sbjct: 282 LKMAGEYDVVILDPP 296 >gi|289706188|ref|ZP_06502552.1| methyltransferase small domain protein [Micrococcus luteus SK58] gi|289557100|gb|EFD50427.1| methyltransferase small domain protein [Micrococcus luteus SK58] Length = 528 Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust. Identities = 28/92 (30%), Positives = 43/92 (46%), Gaps = 12/92 (13%) Query: 94 EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG-------- 145 ++R V R LD+G G G L LL + D+S +AL + N + N Sbjct: 182 QRRPVARALDVGVGCGIQTLHLLAHADHV--TATDLSERALAFTRFNLLLNADVLGLDRE 239 Query: 146 -VSERFDTLQSDWFSSVEG-LFDVIVSNPPYI 175 + +R D + V G FD++VSNPP++ Sbjct: 240 RLEDRVRLAAGDLLAPVAGERFDLVVSNPPFV 271 >gi|260102294|ref|ZP_05752531.1| type I restriction-modification system [Lactobacillus helveticus DSM 20075] gi|260083891|gb|EEW68011.1| type I restriction-modification system [Lactobacillus helveticus DSM 20075] Length = 540 Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust. Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 9/88 (10%) Query: 96 RDVVRILDLGTGTGAVCLAL---LKESPFFKGVGVDISCKALEIAKSNAVTNGVS----- 147 + V I D G+G++ L + +++ G +++ +A+ N + +GVS Sbjct: 230 KQVRTIYDPAVGSGSLLLNVGQHVQDPNLVSYHGQELNTTTYNLARMNLMLHGVSYDDMH 289 Query: 148 -ERFDTLQSDWFSSVEGLFDVIVSNPPY 174 DTL DW LFD +V NPPY Sbjct: 290 LRNGDTLSKDWPVDEPYLFDAVVMNPPY 317 >gi|206563136|ref|YP_002233899.1| putative methyltransferase [Burkholderia cenocepacia J2315] gi|198039176|emb|CAR55140.1| putative methyltransferase [Burkholderia cenocepacia J2315] Length = 282 Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust. Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 1/53 (1%) Query: 99 VRILDLGTGTGAVCLALLKE-SPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150 R+LD+G GTGAV LA+ + + G+DIS + ++ A++ A +G+ RF Sbjct: 50 TRVLDVGCGTGAVTLAIARRLGASTQCTGIDISARMIDAARARADRSGLPARF 102 >gi|120434502|ref|YP_860199.1| hypothetical protein GFO_0132 [Gramella forsetii KT0803] gi|262828327|sp|A0LXM6|TRMN6_GRAFK RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName: Full=tRNA m6A37 methyltransferase gi|117576652|emb|CAL65121.1| conserved hypothetical protein [Gramella forsetii KT0803] Length = 240 Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust. Identities = 43/154 (27%), Positives = 68/154 (44%), Gaps = 22/154 (14%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 ILD+GTGTG + L L + S ++I A E + N + +R + + Sbjct: 42 ILDIGTGTGLIALMLAQRSDAELIDALEIEENAYEQSVENFENSDWGDRLFCYHAAFDEF 101 Query: 161 VEGL-----FDVIVSNPP-YIESVIVDCLGLEVRD---FDPRISLDGGIDGLSHYRTIAD 211 VE + +D+I+SNPP Y E+ G E RD F + L I G SH Sbjct: 102 VEEMQDEEKYDLIISNPPFYSENYKT---GDEYRDQARFADALPLTELIQGASHL----- 153 Query: 212 GVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245 L+++G + I ++++ + I S LF Sbjct: 154 -----LSENGHLDLIIPFSEERKALEITSSHNLF 182 >gi|326407943|gb|ADZ65012.1| type I restriction-modification system, M subunit [Lactococcus lactis subsp. lactis CV56] Length = 531 Score = 39.7 bits (91), Expect = 0.44, Method: Compositional matrix adjust. Identities = 28/90 (31%), Positives = 41/90 (45%), Gaps = 9/90 (10%) Query: 94 EKRDVVRILDLGTGTGAVCLAL---LKESPFFKGVGVDISCKALEIAKSNAVTNGV-SER 149 E R I D G+G++ L + L G +++ +A+ N + +GV ER Sbjct: 213 ESRAPFHIYDPAMGSGSLMLNIRRYLINPNQVHYHGQELNTTTFNLARMNLILHGVDKER 272 Query: 150 F-----DTLQSDWFSSVEGLFDVIVSNPPY 174 DTL +DW S FD +V NPPY Sbjct: 273 MNLNNGDTLDADWPSEEPYQFDSVVMNPPY 302 >gi|319939681|ref|ZP_08014040.1| methyltransferase [Streptococcus anginosus 1_2_62CV] gi|319811270|gb|EFW07576.1| methyltransferase [Streptococcus anginosus 1_2_62CV] Length = 393 Score = 39.7 bits (91), Expect = 0.44, Method: Compositional matrix adjust. Identities = 30/79 (37%), Positives = 39/79 (49%), Gaps = 13/79 (16%) Query: 110 AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-------RFDTLQSDWFSSVE 162 A L +K+ +G DI + +EIAK NA GVSE R L +D + Sbjct: 254 ARALGQIKQDIQLDILGTDIDARMVEIAKRNAEEAGVSEQILFKQMRLQDLHTD---KIN 310 Query: 163 GLFDVIVSNPPYIESVIVD 181 G VIVSNPPY E ++ D Sbjct: 311 G---VIVSNPPYGERLLDD 326 >gi|310821830|ref|YP_003954188.1| hypothetical protein STAUR_4581 [Stigmatella aurantiaca DW4/3-1] gi|309394902|gb|ADO72361.1| conserved uncharacterized protein [Stigmatella aurantiaca DW4/3-1] Length = 250 Score = 39.7 bits (91), Expect = 0.44, Method: Compositional matrix adjust. Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 4/79 (5%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R++DLGTG+G + L L K + G+++ + +A+ N N ++ +Q D Sbjct: 53 RLIDLGTGSGIIPLVLAKRLGLREVTGLELQPRLYSLAERNVYLNRCEQQVTLVQGDLRQ 112 Query: 160 S----VEGLFDVIVSNPPY 174 G F ++ NPPY Sbjct: 113 VSRLFAAGSFCHVLCNPPY 131 >gi|261250466|ref|ZP_05943041.1| ribosomal protein L11 methyltransferase [Vibrio orientalis CIP 102891] gi|260939035|gb|EEX95022.1| ribosomal protein L11 methyltransferase [Vibrio orientalis CIP 102891] Length = 295 Score = 39.7 bits (91), Expect = 0.44, Method: Compositional matrix adjust. Identities = 34/112 (30%), Positives = 56/112 (50%), Gaps = 17/112 (15%) Query: 74 PRPET-ELLVDSALAFS----------LPRIEKRDVV--RILDLGTGTGAVCLALLKESP 120 P P+ +++D LAF L +E D+ ++D G G+G + +A +K Sbjct: 123 PEPDAVNVMLDPGLAFGTGTHPTTALCLEWLEGLDLTGKTVIDFGCGSGILAIAAIKLG- 181 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF-DVIVSN 171 K +G+DI +AL +K NA NGV+++ + EGL DV+V+N Sbjct: 182 AEKVIGIDIDPQALLASKDNAERNGVADQLEVFLPQ--DQPEGLIADVVVAN 231 >gi|21228051|ref|NP_633973.1| methyltransferase [Methanosarcina mazei Go1] gi|20906485|gb|AAM31645.1| methyltransferase [Methanosarcina mazei Go1] Length = 266 Score = 39.7 bits (91), Expect = 0.44, Method: Compositional matrix adjust. Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 6/88 (6%) Query: 77 ETELLVDSALAFSLPRIEKRDVV-----RILDLGTGTGAVCLALLKESPFFKGVGVDISC 131 E E L S A +L ++ D V ++L+ G G GA + L K +P + +DIS Sbjct: 10 EREALRLSEQAETLEKLLHHDTVYPPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISP 69 Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LE A+ N NG+ + LQ++ FS Sbjct: 70 ESLEKARENTEKNGI-KNVKFLQANIFS 96 >gi|81427947|ref|YP_394946.1| putative nucleotide methyltransferase [Lactobacillus sakei subsp. sakei 23K] gi|78609588|emb|CAI54634.1| Putative nucleotide methyltransferase [Lactobacillus sakei subsp. sakei 23K] Length = 201 Score = 39.7 bits (91), Expect = 0.44, Method: Compositional matrix adjust. Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 1/73 (1%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 ILD+G G G + + L K +P + VD++ +AL +A+ N N + + +S + + Sbjct: 63 ILDMGCGYGPIGMTLAKLAPERQIDMVDVNERALGLAQKNCDLNQI-QNVAIFESAEYQN 121 Query: 161 VEGLFDVIVSNPP 173 V + I++NPP Sbjct: 122 VTAQYAAILTNPP 134 >gi|157157132|ref|YP_001464546.1| methyltransferase family protein [Escherichia coli E24377A] gi|229470500|sp|A7ZRW7|RLMG_ECO24 RecName: Full=Ribosomal RNA large subunit methyltransferase G; AltName: Full=23S rRNA m2G1835 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rlmG gi|157079162|gb|ABV18870.1| methyltransferase family protein [Escherichia coli E24377A] Length = 378 Score = 39.7 bits (91), Expect = 0.44, Method: Compositional matrix adjust. Identities = 26/77 (33%), Positives = 43/77 (55%), Gaps = 3/77 (3%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS--ERFDTLQSDWF 158 I+DLG G G + L LL ++P K V VD S A+ ++ N TN +R + + ++ Sbjct: 232 IVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRMNVETNMPEALDRCEFMINNAL 291 Query: 159 SSVEGL-FDVIVSNPPY 174 S V+ F+ ++ NPP+ Sbjct: 292 SGVKPFRFNAVLCNPPF 308 >gi|332796421|ref|YP_004457921.1| methyltransferase small domain-containing protein [Acidianus hospitalis W1] gi|332694156|gb|AEE93623.1| methyltransferase small domain protein [Acidianus hospitalis W1] Length = 184 Score = 39.7 bits (91), Expect = 0.44, Method: Compositional matrix adjust. Identities = 33/141 (23%), Positives = 61/141 (43%), Gaps = 26/141 (18%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 ++DLG G G + + + ++ K +D++ A+ AK N + R ++SD S+ Sbjct: 49 VVDLGCGYGVIGIFIALKNENLKVYMLDVNPLAIATAKMNVERYNLQNRVVVMKSDVLSA 108 Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220 ++ D I SNPP L G+D L + A+ + L K Sbjct: 109 LQEKVDAIYSNPP----------------------LSKGVDFLQKF---AEQSAEKLKKG 143 Query: 221 GLCSVEIGYNQKVDVVRIFES 241 G + + Y + +V++IF + Sbjct: 144 GFIQMVV-YKGENNVLKIFSN 163 >gi|283458471|ref|YP_003363097.1| 16S RNA G1207 methylase RsmC [Rothia mucilaginosa DY-18] gi|283134512|dbj|BAI65277.1| 16S RNA G1207 methylase RsmC [Rothia mucilaginosa DY-18] Length = 207 Score = 39.7 bits (91), Expect = 0.44, Method: Compositional matrix adjust. Identities = 31/112 (27%), Positives = 50/112 (44%), Gaps = 7/112 (6%) Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 V +T ++ F P +D A L R+LD+G G G + L L +P Sbjct: 28 KVTVTTANGIFSPS-----GIDKGTAILLQEAPDPQGTRMLDIGCGWGPITLTLAMLAPQ 82 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173 + VD++ +++ + + NA G+S T+ + E FD I SNPP Sbjct: 83 AQVHAVDVNSRSIGLTERNAAALGLSNV--TVGTPESVDPELRFDTIWSNPP 132 >gi|227879343|ref|ZP_03997207.1| methyltransferase [Lactobacillus crispatus JV-V01] gi|256844518|ref|ZP_05550004.1| conserved hypothetical protein [Lactobacillus crispatus 125-2-CHN] gi|256849093|ref|ZP_05554526.1| conserved hypothetical protein [Lactobacillus crispatus MV-1A-US] gi|262047575|ref|ZP_06020530.1| 16S RNA methylase RsmC [Lactobacillus crispatus MV-3A-US] gi|293381049|ref|ZP_06627070.1| methyltransferase small domain protein [Lactobacillus crispatus 214-1] gi|295692235|ref|YP_003600845.1| methyltransferase small [Lactobacillus crispatus ST1] gi|312977928|ref|ZP_07789674.1| 16S RNA methylase [Lactobacillus crispatus CTV-05] gi|227861064|gb|EEJ68719.1| methyltransferase [Lactobacillus crispatus JV-V01] gi|256613596|gb|EEU18799.1| conserved hypothetical protein [Lactobacillus crispatus 125-2-CHN] gi|256713869|gb|EEU28857.1| conserved hypothetical protein [Lactobacillus crispatus MV-1A-US] gi|260572151|gb|EEX28716.1| 16S RNA methylase RsmC [Lactobacillus crispatus MV-3A-US] gi|290922349|gb|EFD99330.1| methyltransferase small domain protein [Lactobacillus crispatus 214-1] gi|295030341|emb|CBL49820.1| Methyltransferase small [Lactobacillus crispatus ST1] gi|310895235|gb|EFQ44303.1| 16S RNA methylase [Lactobacillus crispatus CTV-05] Length = 206 Score = 39.7 bits (91), Expect = 0.44, Method: Compositional matrix adjust. Identities = 38/149 (25%), Positives = 69/149 (46%), Gaps = 18/149 (12%) Query: 31 DDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSL 90 + Q +F T+ + +H + + D +++ T + F +++ VD + Sbjct: 4 EKNQMYFATDPTAKHDQHVVDYHV----DNIDLKFTTDAGVF-----SKMRVDYGSGVLI 54 Query: 91 PRIEKRDVV----RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146 + +DVV ILD+GTG G + L K P VD++ + L +AK NA N + Sbjct: 55 KAM--KDVVFPKDNILDVGTGYGPIGLFAAKFWPDQTVDMVDVNERGLSLAKQNAQVNHI 112 Query: 147 SERFDTLQSDWFSSVEG--LFDVIVSNPP 173 + + SD + V+ F +I++NPP Sbjct: 113 -DNVNIYSSDCYEHVDNDKKFGLILTNPP 140 >gi|254465429|ref|ZP_05078840.1| SAM-dependent methyltransferase [Rhodobacterales bacterium Y4I] gi|206686337|gb|EDZ46819.1| SAM-dependent methyltransferase [Rhodobacterales bacterium Y4I] Length = 404 Score = 39.7 bits (91), Expect = 0.44, Method: Compositional matrix adjust. Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 7/81 (8%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 R+LD+ + G LA+L + VD S ALE+A A G ++F Q D F Sbjct: 231 ARVLDVFSHVGGFGLAMLAGG-AGQATCVDGSAAALELAAQGAEAGGFKDKFTARQGDAF 289 Query: 159 SSVEGL------FDVIVSNPP 173 + L FDV++ +PP Sbjct: 290 DVLTALGEEGESFDVVICDPP 310 >gi|118589217|ref|ZP_01546623.1| hypothetical protein SIAM614_06728 [Stappia aggregata IAM 12614] gi|118437917|gb|EAV44552.1| hypothetical protein SIAM614_06728 [Stappia aggregata IAM 12614] Length = 218 Score = 39.7 bits (91), Expect = 0.44, Method: Compositional matrix adjust. Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 2/66 (3%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF-- 158 +L+LG GTG +A K P + GVDIS LE A+ N G+++R ++ D Sbjct: 48 VLELGCGTGRNLIAAAKAYPDVRFFGVDISRNMLETAQKNIDKAGLTDRITLVEGDAANP 107 Query: 159 SSVEGL 164 ++ EGL Sbjct: 108 AATEGL 113 >gi|323359328|ref|YP_004225724.1| 16S RNA G1207 methylase RsmC [Microbacterium testaceum StLB037] gi|323275699|dbj|BAJ75844.1| 16S RNA G1207 methylase RsmC [Microbacterium testaceum StLB037] Length = 367 Score = 39.7 bits (91), Expect = 0.44, Method: Compositional matrix adjust. Identities = 24/80 (30%), Positives = 36/80 (45%), Gaps = 1/80 (1%) Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS- 160 +DL GTG V L P + + D S A+ A++ A NGV++R ++ D S Sbjct: 228 IDLACGTGIVAATLATRHPSLRVLACDQSAIAVASARATAEANGVADRVTVVRDDMLGSH 287 Query: 161 VEGLFDVIVSNPPYIESVIV 180 + I NPP+ V Sbjct: 288 ADDSAAFIALNPPFHSGAAV 307 >gi|333023841|ref|ZP_08451905.1| hypothetical protein STTU_1345 [Streptomyces sp. Tu6071] gi|332743693|gb|EGJ74134.1| hypothetical protein STTU_1345 [Streptomyces sp. Tu6071] Length = 528 Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust. Identities = 20/53 (37%), Positives = 32/53 (60%) Query: 97 DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 + R+LDLG G G + LLK++ F +G+D+S +AL+IA + + ER Sbjct: 330 NATRVLDLGCGEGTLVRELLKDTRFTHVLGMDVSQRALQIAARRLRVDRMPER 382 >gi|300070273|gb|ADJ59673.1| type I restriction-modification system, M subunit [Lactococcus lactis subsp. cremoris NZ9000] Length = 539 Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust. Identities = 28/90 (31%), Positives = 41/90 (45%), Gaps = 9/90 (10%) Query: 94 EKRDVVRILDLGTGTGAVCLAL---LKESPFFKGVGVDISCKALEIAKSNAVTNGV-SER 149 E R I D G+G++ L + L G +++ +A+ N + +GV ER Sbjct: 213 ESRAPFHIYDPAMGSGSLMLNIRRYLINPNQVHYHGQELNTTTFNLARMNLILHGVDKER 272 Query: 150 F-----DTLQSDWFSSVEGLFDVIVSNPPY 174 DTL +DW S FD +V NPPY Sbjct: 273 MNLNNGDTLDADWPSEEPYQFDSVVMNPPY 302 >gi|297625531|ref|YP_003687294.1| rRNA (guanine-N2-)-methyltransferase [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296921296|emb|CBL55849.1| rRNA (guanine-N2-)-methyltransferase [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length = 329 Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust. Identities = 27/83 (32%), Positives = 41/83 (49%), Gaps = 5/83 (6%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG--VSERFDTLQSDWF 158 +LDLG G+G + L + +P GVD S A++ + + NG V+ + +DW Sbjct: 191 LLDLGCGSGILATLLARANPEATVHGVDTSLAAVDSTRITSEANGRHVTVHWAWNLNDWP 250 Query: 159 SSVEGLFDVIVSNPPYIESVIVD 181 + DVIV NPP+ V D Sbjct: 251 ADS---LDVIVCNPPFHRGVAKD 270 >gi|125623518|ref|YP_001032001.1| putative type I site-specific deoxyribonuclease [Lactococcus lactis subsp. cremoris MG1363] gi|124492326|emb|CAL97260.1| putative type I site-specific deoxyribonuclease [Lactococcus lactis subsp. cremoris MG1363] Length = 545 Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust. Identities = 28/90 (31%), Positives = 41/90 (45%), Gaps = 9/90 (10%) Query: 94 EKRDVVRILDLGTGTGAVCLAL---LKESPFFKGVGVDISCKALEIAKSNAVTNGV-SER 149 E R I D G+G++ L + L G +++ +A+ N + +GV ER Sbjct: 219 ESRAPFHIYDPAMGSGSLMLNIRRYLINPNQVHYHGQELNTTTFNLARMNLILHGVDKER 278 Query: 150 F-----DTLQSDWFSSVEGLFDVIVSNPPY 174 DTL +DW S FD +V NPPY Sbjct: 279 MNLNNGDTLDADWPSEEPYQFDSVVMNPPY 308 >gi|119510746|ref|ZP_01629873.1| hypothetical protein N9414_05394 [Nodularia spumigena CCY9414] gi|119464610|gb|EAW45520.1| hypothetical protein N9414_05394 [Nodularia spumigena CCY9414] Length = 393 Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust. Identities = 27/86 (31%), Positives = 40/86 (46%), Gaps = 1/86 (1%) Query: 84 SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143 +A F R + +RILD G G+G L+ +P + VG+D+S LE+AK Sbjct: 41 AAYNFCTGRKPPKQDIRILDAGCGSGVSTEYLVHLNPQAQVVGIDLSAGTLEVAKERCKR 100 Query: 144 NGVSE-RFDTLQSDWFSSVEGLFDVI 168 +G F L + G FD+I Sbjct: 101 SGADRVEFHHLSLYDVEQLPGEFDLI 126 >gi|77359469|ref|YP_339044.1| SAM-dependent methyltransferase(yfiC) [Pseudoalteromonas haloplanktis TAC125] gi|123587949|sp|Q3IG80|TRMN6_PSEHT RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName: Full=tRNA m6A37 methyltransferase gi|76874380|emb|CAI85601.1| conserved protein of unknown function ; putative SAM-dependent methyltransferase(yfiC) [Pseudoalteromonas haloplanktis TAC125] Length = 232 Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust. Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 6/77 (7%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN---GVSERFDTLQSDW 157 +LD+GTGTG + L + SP V++ A + A N + + ++Q+ Sbjct: 39 LLDIGTGTGLLALMCKQRSPQLTITAVEVDKNAYQQALQNIAASPWPNIEVHQQSIQT-- 96 Query: 158 FSSVEGLFDVIVSNPPY 174 F+S + FDV+++NPPY Sbjct: 97 FNSAQP-FDVVIANPPY 112 >gi|116747965|ref|YP_844652.1| type 12 methyltransferase [Syntrophobacter fumaroxidans MPOB] gi|116697029|gb|ABK16217.1| Methyltransferase type 12 [Syntrophobacter fumaroxidans MPOB] Length = 338 Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust. Identities = 25/80 (31%), Positives = 38/80 (47%), Gaps = 3/80 (3%) Query: 93 IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152 + R+ +RILD+G G+G A + G G+DI A+ A +N G+ +RF Sbjct: 162 VSGRNPMRILDVGCGSGVFLHAAHSANRNATGAGLDIDEAAVRQATNNIAQWGLEDRFRI 221 Query: 153 LQSDWF---SSVEGLFDVIV 169 D +EG FD+I Sbjct: 222 FHGDTRHPPGGLEGPFDLIT 241 >gi|228473017|ref|ZP_04057774.1| 23S rRNA-methyltransferase [Capnocytophaga gingivalis ATCC 33624] gi|228275599|gb|EEK14376.1| 23S rRNA-methyltransferase [Capnocytophaga gingivalis ATCC 33624] Length = 469 Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust. Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 8/79 (10%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE------RFDTLQ 154 + DL TGTG + + K++ K +GV+ +A+ AK NA N +S + Sbjct: 326 VYDLYTGTGTIAQFVAKKAK--KVIGVEAVPEAIADAKENAQNNQISNVDFFVGDMKNVF 383 Query: 155 SDWFSSVEGLFDVIVSNPP 173 ++ F + GL DVI+++PP Sbjct: 384 NEEFITTHGLPDVIITDPP 402 >gi|257387512|ref|YP_003177285.1| methyltransferase type 11 [Halomicrobium mukohataei DSM 12286] gi|257169819|gb|ACV47578.1| Methyltransferase type 11 [Halomicrobium mukohataei DSM 12286] Length = 250 Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust. Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 2/77 (2%) Query: 95 KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154 KR R+LD+G G G+ L ++ GVDIS A+E+ + A G+ F T Sbjct: 43 KRPTDRVLDVGCGNGSHVLFFAEQG--LSAAGVDISKPAIELGRQRAAETGLDVDFKTGD 100 Query: 155 SDWFSSVEGLFDVIVSN 171 + S FD++VS+ Sbjct: 101 AADLSWGSETFDLVVSD 117 >gi|225023405|ref|ZP_03712597.1| hypothetical protein EIKCOROL_00263 [Eikenella corrodens ATCC 23834] gi|224943883|gb|EEG25092.1| hypothetical protein EIKCOROL_00263 [Eikenella corrodens ATCC 23834] Length = 369 Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust. Identities = 35/119 (29%), Positives = 52/119 (43%), Gaps = 15/119 (12%) Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162 D+GTG+G V ALL D S +A+ A++N G+ LQ+D F E Sbjct: 193 DIGTGSG-VIAALLARRGLQPVTATDNSPRAVACARANFQRLGLPP-IRLLQTDLFP--E 248 Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221 G D+IV NPP++ + +E +DP G + ++ HLN G Sbjct: 249 GCADLIVCNPPWLPA--KPAADIETALYDP---------GSAMLQSFLQQAPAHLNPGG 296 >gi|332665116|ref|YP_004447904.1| type 12 methyltransferase [Haliscomenobacter hydrossis DSM 1100] gi|332333930|gb|AEE51031.1| Methyltransferase type 12 [Haliscomenobacter hydrossis DSM 1100] Length = 464 Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust. Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 4/59 (6%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKS----NAVTNGVSERFDTLQS 155 +LDLG G G + LL+E F + VGVD+S +L++A +T ER + LQS Sbjct: 286 VLDLGCGEGRLLKMLLREGQFTRIVGVDVSFYSLQVATRRLYLKEMTPKQKERIELLQS 344 >gi|322692228|gb|EFY84166.1| hypothetical protein MAC_09792 [Metarhizium acridum CQMa 102] Length = 225 Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust. Identities = 40/131 (30%), Positives = 60/131 (45%), Gaps = 15/131 (11%) Query: 64 RLTLSSDTFEPR--PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 +L + + P+ PET + LP I K L++G G+G + L L Sbjct: 34 QLQIHPSVYSPKYFPETLWYGQN-----LPSIVKGG--SFLEIGVGSGLISLHLAASGS- 85 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY-IESVIV 180 K VG DI+ A+E + N N F + SD F ++G FD I N P+ I++ + Sbjct: 86 -KVVGADINPFAVETTQQNFSRNQQEGTF--IVSDIFDKIDGRFDFIFWNHPWQIDASVP 142 Query: 181 DCLGLEVRDFD 191 D L E + FD Sbjct: 143 DELKTE-KTFD 152 >gi|304414236|ref|ZP_07395604.1| methylase for 50S ribosomal subunit protein L11 [Candidatus Regiella insecticola LSR1] gi|304283450|gb|EFL91846.1| methylase for 50S ribosomal subunit protein L11 [Candidatus Regiella insecticola LSR1] Length = 330 Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust. Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 3/67 (4%) Query: 87 AFSLPRIEKRDVV--RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN 144 A L ++ D+V I+D G G+G + +A LK +G+DI +A++ ++ N N Sbjct: 181 ALCLQWLDSLDLVGKTIIDFGCGSGILAIAALKLGAA-HAIGIDIDAQAIQASRDNVQRN 239 Query: 145 GVSERFD 151 GVSE D Sbjct: 240 GVSENLD 246 >gi|268679452|ref|YP_003303883.1| methyltransferase [Sulfurospirillum deleyianum DSM 6946] gi|268617483|gb|ACZ11848.1| methyltransferase [Sulfurospirillum deleyianum DSM 6946] Length = 253 Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust. Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 7/74 (9%) Query: 101 ILDLGTGTG--AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 +LD+G+GTG ++ LALL +D S K L I K +A G+ T QSDW Sbjct: 47 LLDIGSGTGTFSIPLALLH----VNVTAIDTSAKMLAILKEDAQNEGIEGFIKTYQSDWD 102 Query: 159 S-SVEGLFDVIVSN 171 S ++ +D+++++ Sbjct: 103 SFALTTPYDIVLAS 116 >gi|22416339|emb|CAC87150.1| restriction-modification enzyme type I M subunit [Streptococcus thermophilus] Length = 531 Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust. Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 9/90 (10%) Query: 94 EKRDVVRILDLGTGTGAVCLALLKESPFFKGV---GVDISCKALEIAKSNAVTNGV-SER 149 E R I D G+G++ L + + V G +++ +A+ N + +GV ER Sbjct: 213 ESRVPFHIYDPAMGSGSLMLNIRRYLIHPNQVHYHGQELNTTTFNLARMNLILHGVDKER 272 Query: 150 F-----DTLQSDWFSSVEGLFDVIVSNPPY 174 DTL +DW S FD +V NPPY Sbjct: 273 MNLNNGDTLDADWPSEEPYQFDSVVMNPPY 302 >gi|330830946|ref|YP_004393898.1| ribosomal protein L11 methyltransferase [Aeromonas veronii B565] gi|328806082|gb|AEB51281.1| Ribosomal protein L11 methyltransferase [Aeromonas veronii B565] Length = 292 Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust. Identities = 42/168 (25%), Positives = 78/168 (46%), Gaps = 23/168 (13%) Query: 24 VDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV-----RLTLSSDTFE-PRPE 77 DP + Q+ F N + + E + W D ++ RL + + P P+ Sbjct: 64 TDPAPTIAFFQQIFGENVGYKVEQLEDKDWVREWMDHFHPMQFGERLWICPSWRDVPNPD 123 Query: 78 T-ELLVDSALAFS----------LPRIEKRDVV--RILDLGTGTGAVCLALLKESPFFKG 124 +++D LAF L ++ D+ ++D G G+G + +A LK + Sbjct: 124 AVNVMLDPGLAFGTGTHPTTALCLQWLDGLDLAGKTVVDFGCGSGILGIAALKLG-AARV 182 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFSSVEGLFDVIVSN 171 +G+DI +A++ ++ NA NGV+++ + L +D VE DV+V+N Sbjct: 183 IGIDIDPQAIQASRDNAARNGVADQIELYLPADQPQDVEA--DVVVAN 228 >gi|150401069|ref|YP_001324835.1| methyltransferase small [Methanococcus aeolicus Nankai-3] gi|150013772|gb|ABR56223.1| methyltransferase small [Methanococcus aeolicus Nankai-3] Length = 201 Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust. Identities = 29/120 (24%), Positives = 56/120 (46%), Gaps = 15/120 (12%) Query: 62 NVRLTLSSDT--FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119 N + T +D+ F P+ +D + ++ ILD+G G G V +++ E Sbjct: 23 NKKFTFKTDSGIFSPKK-----IDKGTKILVEALQLGKNYDILDIGCGYGVVGISIANEV 77 Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGV-----SERFDTLQSDWFSSVEG-LFDVIVSNPP 173 DI+ +A+ +AK N N + ++ +Q + + +V+ +D+I+SNPP Sbjct: 78 NSI--TMTDINNRAVNLAKKNLKLNNIDKYLEEDKITIVQGNLYQNVKNKKYDLIISNPP 135 >gi|221134002|ref|ZP_03560307.1| hypothetical protein GHTCC_03659 [Glaciecola sp. HTCC2999] Length = 388 Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust. Identities = 31/89 (34%), Positives = 47/89 (52%), Gaps = 8/89 (8%) Query: 90 LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 LP IE VV DLG G G + +L ++P K VD S A+E AK N V + E+ Sbjct: 233 LPLIEGEHVV---DLGCGNGVIGCTVLADAPNAKVTFVDESYMAIESAKRN-VQDNFPEQ 288 Query: 150 F---DTLQSDWFSSVE-GLFDVIVSNPPY 174 + D + ++ S V+ D+++ NPP+ Sbjct: 289 YAQCDFVVANCLSQVDLEHVDLVLCNPPF 317 >gi|332654575|ref|ZP_08420318.1| putative methyltransferase [Ruminococcaceae bacterium D16] gi|332516539|gb|EGJ46145.1| putative methyltransferase [Ruminococcaceae bacterium D16] Length = 409 Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust. Identities = 29/80 (36%), Positives = 43/80 (53%), Gaps = 8/80 (10%) Query: 100 RILDLGTGTGAVCL-ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 R+LD T TG+ L A L + VD+S A+++A+ NAV NG+ R D L +D F Sbjct: 238 RVLDCFTHTGSFALNAALGGAEHV--TAVDVSQAAVDLARDNAVRNGLEGRMDFLCADVF 295 Query: 159 SSVEGL-----FDVIVSNPP 173 + L +D I+ +PP Sbjct: 296 DLLPTLEHQPDYDFIILDPP 315 >gi|282863639|ref|ZP_06272697.1| methyltransferase small [Streptomyces sp. ACTE] gi|282561340|gb|EFB66884.1| methyltransferase small [Streptomyces sp. ACTE] Length = 505 Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust. Identities = 38/131 (29%), Positives = 56/131 (42%), Gaps = 15/131 (11%) Query: 95 KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154 +R V LDLGTG+G L + + + D++ +AL+ + +G + D + Sbjct: 154 RRPVASALDLGTGSGIQALHAAQHA--TQVTATDVNPRALDFTRLTLALSGAAP-ADLRE 210 Query: 155 SDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213 F V L +D+IVSNPP+ VI L R DGG+ G RT+ Sbjct: 211 GSLFEPVGDLTYDLIVSNPPF---VISPGARLTYR--------DGGMGGDDLCRTLVQQA 259 Query: 214 SRHLNKDGLCS 224 LN G Sbjct: 260 GDRLNDGGYAQ 270 >gi|297735070|emb|CBI17432.3| unnamed protein product [Vitis vinifera] Length = 383 Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust. Identities = 24/84 (28%), Positives = 46/84 (54%), Gaps = 3/84 (3%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +L++G GTG + L LL+ + + V V++ + +EI + +G+ ++ + D + Sbjct: 78 VLEIGPGTGNLTLRLLQAAQ--RVVAVELDARMVEILRKRVAEHGLEDQLTVICKDALKT 135 Query: 161 VEGLFDVIVSNPPY-IESVIVDCL 183 FD++V+N PY I S +V L Sbjct: 136 DFPQFDLVVANIPYGISSPLVAKL 159 >gi|210622471|ref|ZP_03293176.1| hypothetical protein CLOHIR_01124 [Clostridium hiranonis DSM 13275] gi|210154184|gb|EEA85190.1| hypothetical protein CLOHIR_01124 [Clostridium hiranonis DSM 13275] Length = 189 Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust. Identities = 32/109 (29%), Positives = 55/109 (50%), Gaps = 15/109 (13%) Query: 101 ILDLGTGTGAV---CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 +LDL G+G++ CL+ E F D+S ++++I +SN V + D+ Sbjct: 45 VLDLFAGSGSLGIECLSRGAEHCVFS----DLSKESIKIIQSNIKKARVERESTVINKDY 100 Query: 158 FSSVEGL------FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200 + + + FD+I+ +PPY E + VDC +E D + +S DG I Sbjct: 101 KNVISDMGIKKQEFDIIMLDPPYYEGLFVDC--IERIDKNQILSEDGVI 147 >gi|163790646|ref|ZP_02185074.1| type I restriction-modification system methyltransferase subunit [Carnobacterium sp. AT7] gi|159874094|gb|EDP68170.1| type I restriction-modification system methyltransferase subunit [Carnobacterium sp. AT7] Length = 540 Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust. Identities = 28/112 (25%), Positives = 47/112 (41%), Gaps = 13/112 (11%) Query: 72 FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK---ESPFFKGVGVD 128 + P+P +L+ L E + + D G+G++ L K E G + Sbjct: 201 YTPQPVAKLMTQIVLQGK----ENQKGFSVYDPTMGSGSLLLNAKKYSNEPGTISYFGQE 256 Query: 129 ISCKALEIAKSNAVTNGVS------ERFDTLQSDWFSSVEGLFDVIVSNPPY 174 ++ +A+ N + +GVS DTL DW + FD ++ NPPY Sbjct: 257 LNTSTYNLARMNMILHGVSTANQDLHNADTLDQDWPTEEPTNFDAVLMNPPY 308 >gi|51245141|ref|YP_065025.1| putative SAM-dependent methyltransferase [Desulfotalea psychrophila LSv54] gi|81642445|sp|Q6ANQ6|RLMF_DESPS RecName: Full=Ribosomal RNA large subunit methyltransferase F; AltName: Full=23S rRNA mA1618 methyltransferase; AltName: Full=rRNA adenine N-6-methyltransferase gi|50876178|emb|CAG36018.1| conserved hypothetical protein [Desulfotalea psychrophila LSv54] Length = 309 Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust. Identities = 31/102 (30%), Positives = 52/102 (50%), Gaps = 11/102 (10%) Query: 86 LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA----KSNA 141 LA LP K +R+LD+GTG + + +S + VG DI A++IA ++N+ Sbjct: 101 LAEDLPTSAKGKKIRVLDIGTGANCIYPIIGSQSYGWHFVGTDIDPLAIKIAGMIVQANS 160 Query: 142 VTNG---VSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESV 178 NG + ++ D + F + E FD+ + NPP+ S+ Sbjct: 161 CLNGKITLKQQLD--KKLIFKGIINEDKFDLTMCNPPFHASL 200 >gi|313677810|ref|YP_004055806.1| methyltransferase small [Marivirga tractuosa DSM 4126] gi|312944508|gb|ADR23698.1| methyltransferase small [Marivirga tractuosa DSM 4126] Length = 237 Score = 39.7 bits (91), Expect = 0.47, Method: Compositional matrix adjust. Identities = 24/81 (29%), Positives = 43/81 (53%), Gaps = 1/81 (1%) Query: 97 DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 +V +L++GTGTG + L L + K V+I+ A E A++N + + R + D Sbjct: 36 NVRAVLEVGTGTGVLSLMLAQRFSDIKIDAVEINPIAYEEAQNNFKNSKWNARLKVVLED 95 Query: 157 WFS-SVEGLFDVIVSNPPYIE 176 + + +D+I SNPP+ + Sbjct: 96 FIEFETDHKYDLIFSNPPFFK 116 >gi|302552775|ref|ZP_07305117.1| conserved hypothetical protein [Streptomyces viridochromogenes DSM 40736] gi|302470393|gb|EFL33486.1| conserved hypothetical protein [Streptomyces viridochromogenes DSM 40736] Length = 258 Score = 39.7 bits (91), Expect = 0.47, Method: Compositional matrix adjust. Identities = 22/89 (24%), Positives = 45/89 (50%) Query: 81 LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140 L ++ A + R+ + +LD+G G G + L +L+ +P KG+GVD+ + L + Sbjct: 28 LSETRAAQLVARLTRNTPKTVLDIGCGWGELMLRVLEAAPRAKGIGVDLDAEDLSRGRRA 87 Query: 141 AVTNGVSERFDTLQSDWFSSVEGLFDVIV 169 A G++ R ++ + G D+++ Sbjct: 88 AEQRGLTTRARFVEESATGTTRGPADLVL 116 >gi|300214333|gb|ADJ78749.1| Methyltransferase [Lactobacillus salivarius CECT 5713] Length = 252 Score = 39.7 bits (91), Expect = 0.47, Method: Compositional matrix adjust. Identities = 32/117 (27%), Positives = 59/117 (50%), Gaps = 13/117 (11%) Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 +++ SS+ F + LL D A + K+ +I+DL G GAV L L + Sbjct: 20 IKIIQSSEVFSFSIDAILLADFADSL------KKKNSKIVDLCAGNGAVGL-FLSQKVNG 72 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF-----DVIVSNPPY 174 K + V+I + ++A+ + + N + ++ L D ++++GL D++V NPPY Sbjct: 73 KIIQVEIQKRLADMARRSILLNNLEDKITILNED-LNNLQGLISKDSVDMVVCNPPY 128 >gi|294979860|pdb|3MGG|A Chain A, Crystal Structure Of Methyl Transferase From Methanosarcina Mazei gi|294979861|pdb|3MGG|B Chain B, Crystal Structure Of Methyl Transferase From Methanosarcina Mazei Length = 276 Score = 39.7 bits (91), Expect = 0.47, Method: Compositional matrix adjust. Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 6/88 (6%) Query: 77 ETELLVDSALAFSLPRIEKRDVV-----RILDLGTGTGAVCLALLKESPFFKGVGVDISC 131 E E L S A +L ++ D V ++L+ G G GA + L K +P + +DIS Sbjct: 12 EREALRLSEQAETLEKLLHHDTVYPPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISP 71 Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LE A+ N NG+ + LQ++ FS Sbjct: 72 ESLEKARENTEKNGI-KNVKFLQANIFS 98 >gi|42519266|ref|NP_965196.1| methyltransferase [Lactobacillus johnsonii NCC 533] gi|81832209|sp|Q74IX0|PRMA_LACJO RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11 Mtase gi|41583554|gb|AAS09162.1| probable methyltransferase [Lactobacillus johnsonii NCC 533] Length = 315 Score = 39.7 bits (91), Expect = 0.47, Method: Compositional matrix adjust. Identities = 28/102 (27%), Positives = 53/102 (51%), Gaps = 8/102 (7%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 + +LD+GTG+G + +A K +G DIS +A+ AK N N + + D +++ Sbjct: 179 MSVLDVGTGSGILAIAASKLGASHV-LGTDISDEAVTAAKENIALNNI-DNIDVRKANLL 236 Query: 159 SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200 ++ +D+IV+N ++ D L + D D ++ +G I Sbjct: 237 KDIDEKYDLIVAN------ILADILLELIPDLDNHLNENGKI 272 >gi|10956197|ref|NP_051026.1| type IC modification subunit [Streptococcus thermophilus] gi|6137148|gb|AAF04357.1| type IC modification subunit [Streptococcus thermophilus] Length = 531 Score = 39.7 bits (91), Expect = 0.47, Method: Compositional matrix adjust. Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 9/90 (10%) Query: 94 EKRDVVRILDLGTGTGAVCLALLKESPFFKGV---GVDISCKALEIAKSNAVTNGV-SER 149 E R I D G+G++ L + + V G +++ +A+ N + +GV ER Sbjct: 213 ESRVPFHIYDPAMGSGSLMLNIRRYLIHPNQVHYHGQELNTTTFNLARMNLILHGVDKER 272 Query: 150 F-----DTLQSDWFSSVEGLFDVIVSNPPY 174 DTL +DW S FD +V NPPY Sbjct: 273 MNLNNGDTLDADWPSEEPYQFDSVVMNPPY 302 >gi|330752034|emb|CBL80546.1| RNA methyltransferase [uncultured Flavobacteria bacterium] Length = 484 Score = 39.7 bits (91), Expect = 0.47, Method: Compositional matrix adjust. Identities = 27/87 (31%), Positives = 43/87 (49%), Gaps = 2/87 (2%) Query: 62 NVRLTLSSDTFEPRPET-ELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120 N +++ S F+ P++ E L + ++L + E D ++DL GTG + L S Sbjct: 300 NFEISMKS-FFQTNPKSAEKLYLKVIEYALEKKEAIDNTIVMDLFCGTGTIGQILASRST 358 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVS 147 K +GVDI A+ AK NA N + Sbjct: 359 NAKIIGVDIVASAINDAKKNAKINNIQ 385 >gi|325847814|ref|ZP_08170036.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|325480832|gb|EGC83885.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 548 Score = 39.7 bits (91), Expect = 0.47, Method: Compositional matrix adjust. Identities = 28/90 (31%), Positives = 46/90 (51%), Gaps = 8/90 (8%) Query: 87 AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146 A L ++K +LDL +GTG + K + K VG++I +A+E A NA N + Sbjct: 303 AIELANVDKNK--NVLDLYSGTGTITQLFAKAAN--KAVGIEIVEEAVEKAFDNAKENQI 358 Query: 147 SERFDTLQSDWFSS---VEGLFDVIVSNPP 173 E + + D V+G +D++V +PP Sbjct: 359 -ENINFIAGDVLEKIDLVKGKYDIVVLDPP 387 >gi|238758367|ref|ZP_04619545.1| Ribosomal protein L11 methyltransferase [Yersinia aldovae ATCC 35236] gi|238703490|gb|EEP96029.1| Ribosomal protein L11 methyltransferase [Yersinia aldovae ATCC 35236] Length = 293 Score = 39.7 bits (91), Expect = 0.47, Method: Compositional matrix adjust. Identities = 39/120 (32%), Positives = 60/120 (50%), Gaps = 18/120 (15%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159 ++D G G+G + +A LK +G+DI +A++ ++ NA NGVSER L D + Sbjct: 162 VIDFGCGSGILAIAALKLG-AAHAIGIDIDPQAIQASRDNAQRNGVSERLALYLAKDQPA 220 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS---LDGGIDGLSH-YRTIADGVSR 215 + DV+V+N L +R+ P IS + GG GLS T A GV++ Sbjct: 221 DLSA--DVVVAN----------ILAGPLRELAPLISVLPVAGGHLGLSGVLATQAVGVAQ 268 >gi|209696241|ref|YP_002264171.1| ribosomal protein L11 methyltransferase [Aliivibrio salmonicida LFI1238] gi|226706548|sp|B6ENA3|PRMA_ALISL RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11 Mtase gi|208010194|emb|CAQ80521.1| ribosomal protein L11 methyltransferase [Aliivibrio salmonicida LFI1238] Length = 294 Score = 39.7 bits (91), Expect = 0.47, Method: Compositional matrix adjust. Identities = 28/90 (31%), Positives = 46/90 (51%), Gaps = 14/90 (15%) Query: 74 PRPET-ELLVDSALAFS----------LPRIEKRDVV--RILDLGTGTGAVCLALLKESP 120 P P+ +++D LAF L +E D+ ++D G G+G + +A +K Sbjct: 123 PEPDAINVMLDPGLAFGTGTHATTALCLEWLESIDLTGKTVIDFGCGSGILAIAAIKLGA 182 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERF 150 K VG+DI +A+ +K NA NGV+E+ Sbjct: 183 A-KVVGIDIDPQAITASKDNATRNGVAEQL 211 >gi|154250010|ref|YP_001410835.1| hypothetical protein Fnod_1331 [Fervidobacterium nodosum Rt17-B1] gi|154153946|gb|ABS61178.1| conserved hypothetical protein [Fervidobacterium nodosum Rt17-B1] Length = 182 Score = 39.7 bits (91), Expect = 0.47, Method: Compositional matrix adjust. Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 4/75 (5%) Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD---WFS 159 D+ G+G+V +L + V VD+S KA+ K NA G+ ++ + D + Sbjct: 46 DVCCGSGSVGFEMLSNGAK-EVVFVDVSNKAISTVKENAKNLGLDDKIKIYKEDVRRFLE 104 Query: 160 SVEGLFDVIVSNPPY 174 S +FD+I S+PPY Sbjct: 105 SYGNVFDIIYSDPPY 119 >gi|71282529|ref|YP_271142.1| ribosomal RNA small subunit methyltransferase C [Colwellia psychrerythraea 34H] gi|123630908|sp|Q47VN0|RSMC_COLP3 RecName: Full=Ribosomal RNA small subunit methyltransferase C; AltName: Full=16S rRNA m2G1207 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rsmC gi|71148269|gb|AAZ28742.1| ribosomal RNA small subunit methyltransferase C [Colwellia psychrerythraea 34H] Length = 357 Score = 39.7 bits (91), Expect = 0.47, Method: Compositional matrix adjust. Identities = 36/146 (24%), Positives = 60/146 (41%), Gaps = 35/146 (23%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV---DISCKALEIAK 138 +D A L + + ++LD G G G + + K+ F G + D+S AL A+ Sbjct: 201 LDVGTALLLSNLPSKMTGKVLDFGCGAGVISCFIGKK---FSGTNLSLLDVSALALTSAQ 257 Query: 139 SNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG 198 + NG+S + S+ S V + +VSNPP+ + V Sbjct: 258 ESLALNGLSG--NVFPSNSLSDVNEHYQHVVSNPPFHQGV-------------------- 295 Query: 199 GIDGLSHYRTIAD---GVSRHLNKDG 221 +HY+ D G+++ LNK G Sbjct: 296 ----KTHYQASEDFLAGINKKLNKQG 317 >gi|297623439|ref|YP_003704873.1| ubiquinone/menaquinone biosynthesis methyltransferase [Truepera radiovictrix DSM 17093] gi|297164619|gb|ADI14330.1| ubiquinone/menaquinone biosynthesis methyltransferase [Truepera radiovictrix DSM 17093] Length = 270 Score = 39.7 bits (91), Expect = 0.48, Method: Compositional matrix adjust. Identities = 23/71 (32%), Positives = 35/71 (49%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 +R+LD+ TGT + LAL + P + VGVD + L I + A G+S R + Sbjct: 64 LRVLDVATGTADLALALKRARPQAEVVGVDFAEPMLAIGRRKARARGLSVRLELGDGLAL 123 Query: 159 SSVEGLFDVIV 169 + FDV+ Sbjct: 124 PYGDAQFDVVT 134 >gi|258509976|ref|YP_003175639.1| Type I restriction modification system protein HsdMI, M subunit [Lactobacillus rhamnosus Lc 705] gi|257152817|emb|CAR91788.1| Type I restriction-modification system, M subunit [Lactobacillus rhamnosus Lc 705] Length = 540 Score = 39.7 bits (91), Expect = 0.48, Method: Compositional matrix adjust. Identities = 25/86 (29%), Positives = 40/86 (46%), Gaps = 9/86 (10%) Query: 98 VVRILDLGTGTGAVCLAL---LKESPFFKGVGVDISCKALEIAKSNAVTNGVS------E 148 V I D G+G++ L + +++ G +++ +A+ N + +GVS Sbjct: 232 VRTIYDPAVGSGSLLLNVGQHVQDPSLVSYHGQELNTTTFNLARMNLMLHGVSYDDMHLR 291 Query: 149 RFDTLQSDWFSSVEGLFDVIVSNPPY 174 DTL DW LFD +V NPPY Sbjct: 292 NGDTLSKDWPVDEPYLFDAVVMNPPY 317 >gi|256395760|ref|YP_003117324.1| methylase [Catenulispora acidiphila DSM 44928] gi|256361986|gb|ACU75483.1| methylase [Catenulispora acidiphila DSM 44928] Length = 215 Score = 39.7 bits (91), Expect = 0.48, Method: Compositional matrix adjust. Identities = 41/115 (35%), Positives = 63/115 (54%), Gaps = 12/115 (10%) Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L + ++PR +T+LL+D+ L R R+LDLGTG+GAV +A + + Sbjct: 4 LFVPPGVYQPRSDTDLLIDALRNERLGRN-----CRVLDLGTGSGAVAVAAARRG--ARV 56 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQ-SDWFSSV-EGLFDVIVSNPPYIES 177 VDIS +A+ N V + RF ++ D+ ++ G FDV+VSNPPY+ S Sbjct: 57 TAVDISRRAVATTWVNGV---LHRRFIRVRRGDFLEALGPGRFDVVVSNPPYVPS 108 >gi|332667668|ref|YP_004450456.1| tRNA (adenine-N(6)-)-methyltransferase [Haliscomenobacter hydrossis DSM 1100] gi|332336482|gb|AEE53583.1| tRNA (adenine-N(6)-)-methyltransferase [Haliscomenobacter hydrossis DSM 1100] Length = 264 Score = 39.7 bits (91), Expect = 0.48, Method: Compositional matrix adjust. Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 3/78 (3%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ---SD 156 RILD+G GTG + + L + + V++ A E A+ N + R + + D Sbjct: 66 RILDIGAGTGIIAIMLGQRNAEAIIHAVEVDDLAFEQAQENMRNAPWANRLEVIHHSIQD 125 Query: 157 WFSSVEGLFDVIVSNPPY 174 + + +D+IVSNPP+ Sbjct: 126 FAETQPQQYDLIVSNPPF 143 >gi|308188308|ref|YP_003932439.1| ribosomal protein L11 methyltransferase [Pantoea vagans C9-1] gi|308058818|gb|ADO10990.1| ribosomal protein L11 methyltransferase [Pantoea vagans C9-1] Length = 293 Score = 39.7 bits (91), Expect = 0.48, Method: Compositional matrix adjust. Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 10/65 (15%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---------D 151 ++D G G+G + +A LK + +G+DI +A++ ++ NA NGVS+R D Sbjct: 162 VIDFGCGSGILAIAALKLG-AAQAIGIDIDPQAIQASRDNAKRNGVSDRLSLYLPHQQPD 220 Query: 152 TLQSD 156 LQ+D Sbjct: 221 NLQAD 225 >gi|269103477|ref|ZP_06156174.1| hypothetical 16S RNA G1207 methylase RsmC [Photobacterium damselae subsp. damselae CIP 102761] gi|268163375|gb|EEZ41871.1| hypothetical 16S RNA G1207 methylase RsmC [Photobacterium damselae subsp. damselae CIP 102761] Length = 339 Score = 39.7 bits (91), Expect = 0.48, Method: Compositional matrix adjust. Identities = 26/97 (26%), Positives = 48/97 (49%), Gaps = 11/97 (11%) Query: 78 TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137 +ELL+++ LP++ + +LD G G G + + + P DIS A+E A Sbjct: 189 SELLLNN-----LPQLHGK----VLDFGCGAGVIGAVMKAKYPEIDVELCDISALAIESA 239 Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174 K N ++ F +D + ++ G + ++SNPP+ Sbjct: 240 KETFKVNNLTGSFTA--TDVYKTLTGPYQFLISNPPF 274 >gi|293335775|ref|NP_001170403.1| hypothetical protein LOC100384389 [Zea mays] gi|224035659|gb|ACN36905.1| unknown [Zea mays] Length = 401 Score = 39.7 bits (91), Expect = 0.48, Method: Compositional matrix adjust. Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 14/86 (16%) Query: 74 PRPE-TELLVDSALAFSL---PRIEK-----RDVVR----ILDLGTGTGAVCLALLKESP 120 P PE T +++D LAF + P + R+V++ +LD GTGTG + +A LK Sbjct: 203 PDPEATNIIIDPGLAFGMGEHPTTKLCLLFLREVIKGGECVLDYGTGTGVLGIAALKMG- 261 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGV 146 + G+DI +A+ A N + NG+ Sbjct: 262 ATQSTGIDIDPQAIASASENLLLNGL 287 >gi|210134633|ref|YP_002301072.1| type I R-M system M protein [Helicobacter pylori P12] gi|210132601|gb|ACJ07592.1| type I R-M system M protein [Helicobacter pylori P12] Length = 543 Score = 39.7 bits (91), Expect = 0.48, Method: Compositional matrix adjust. Identities = 29/90 (32%), Positives = 43/90 (47%), Gaps = 9/90 (10%) Query: 94 EKRDVVRILDLGTGTGAVCLALLKE--SPFFKGVGVDISCKALEIAKSNAVTNGVSERF- 150 E V+I D TGTG + +AL + + DIS K+L + K N + N ++ Sbjct: 226 EPTQSVKIYDPSTGTGTLLMALAHQIGTTSCTLYAQDISQKSLRMLKLNLILNDLTHSLR 285 Query: 151 -----DTLQSDWFSS-VEGLFDVIVSNPPY 174 +TL + + S G D IVSNPP+ Sbjct: 286 YAIEGNTLTNPYHSKECHGKMDYIVSNPPF 315 >gi|145641855|ref|ZP_01797430.1| 16S ribosomal RNA m2G1207 methyltransferase [Haemophilus influenzae R3021] gi|145273477|gb|EDK13348.1| 16S ribosomal RNA m2G1207 methyltransferase [Haemophilus influenzae 22.4-21] Length = 112 Score = 39.7 bits (91), Expect = 0.48, Method: Compositional matrix adjust. Identities = 30/98 (30%), Positives = 46/98 (46%), Gaps = 29/98 (29%) Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLE 186 DI ALE A+ N + + + SD FS +EG FD+I+SNPP+ + Sbjct: 2 TDIHAMALESARKTLSENQL--QGEVYASDVFSDIEGKFDLIISNPPFHD---------- 49 Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSR---HLNKDG 221 GID + YRT+ + +++ HLN+ G Sbjct: 50 ------------GID--TAYRTVKELITQAKWHLNQGG 73 >gi|292489102|ref|YP_003531989.1| hypothetical protein EAMY_2634 [Erwinia amylovora CFBP1430] gi|292900224|ref|YP_003539593.1| methyltransferase [Erwinia amylovora ATCC 49946] gi|291200072|emb|CBJ47198.1| putative methyltransferase [Erwinia amylovora ATCC 49946] gi|291554536|emb|CBA22118.1| Uncharacterized protein yfiC [Erwinia amylovora CFBP1430] gi|312173259|emb|CBX81514.1| Uncharacterized protein yfiC [Erwinia amylovora ATCC BAA-2158] Length = 245 Score = 39.7 bits (91), Expect = 0.48, Method: Compositional matrix adjust. Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 4/82 (4%) Query: 97 DVVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQS 155 +V R LD+G+G+G + L L + + + V++ A A+ N + ++ Q+ Sbjct: 44 NVQRALDIGSGSGLIALMLAQRTADPVQIDAVELDEAAALQAQENVAASPWPDKVRVQQA 103 Query: 156 D---WFSSVEGLFDVIVSNPPY 174 D W E + +IVSNPPY Sbjct: 104 DIVEWTQRCEHRYSLIVSNPPY 125 >gi|218884715|ref|YP_002429097.1| Predicted rRNA or tRNA methylase [Desulfurococcus kamchatkensis 1221n] gi|218766331|gb|ACL11730.1| Predicted rRNA or tRNA methylase [Desulfurococcus kamchatkensis 1221n] Length = 193 Score = 39.7 bits (91), Expect = 0.48, Method: Compositional matrix adjust. Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 1/77 (1%) Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 +DLG G+G + L L + K + +DI AL + N V N + + L SD S+ Sbjct: 26 MDLGCGSGVLGLHALLKGYCEKVIFIDIDEDALNTVRENTVLNNAAGKNIILSSDTGISI 85 Query: 162 -EGLFDVIVSNPPYIES 177 E D++++NPPY+ + Sbjct: 86 KESSIDLVLANPPYLPA 102 >gi|332976078|gb|EGK12947.1| UbiE/COQ5 family methyltransferase [Psychrobacter sp. 1501(2011)] Length = 185 Score = 39.7 bits (91), Expect = 0.49, Method: Compositional matrix adjust. Identities = 34/97 (35%), Positives = 46/97 (47%), Gaps = 15/97 (15%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 +LD G GTG AL + K + +DIS K +EIAK+ A+ + + E + LQ+D F Sbjct: 14 VLDYGCGTGTTACAL---AHHVKQIHAIDISLKMIEIAKAKAIMSKI-ENINFLQTDIFD 69 Query: 160 S--VEGLFDVI--------VSNPPYIESVIVDCLGLE 186 FD I VSNP + I D L E Sbjct: 70 KRYHNDSFDTILAFNMLHTVSNPHEVTQRIHDLLKPE 106 >gi|307289959|ref|ZP_07569887.1| N-6 DNA Methylase [Enterococcus faecalis TX0411] gi|306498983|gb|EFM68473.1| N-6 DNA Methylase [Enterococcus faecalis TX0411] Length = 330 Score = 39.7 bits (91), Expect = 0.49, Method: Compositional matrix adjust. Identities = 29/107 (27%), Positives = 48/107 (44%), Gaps = 9/107 (8%) Query: 94 EKRDVVRILDLGTGTGAVCLAL---LKESPFFKGVGVDISCKALEIAKSNAVTNGV-SER 149 ++R + D G+G++ L + L K G +++ +AK N + +GV +E Sbjct: 197 KERPFFSVFDPTMGSGSLMLNVRNYLTHPDNVKYHGQELNTTTYNLAKMNLILHGVDAEE 256 Query: 150 F-----DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFD 191 DTL DW + FD +V NPPY + D L+ F+ Sbjct: 257 MNIRNGDTLNKDWPTDEPYTFDAVVMNPPYSANWSADTTFLDDSRFN 303 >gi|297797749|ref|XP_002866759.1| ribosomal RNA adenine dimethylase family protein [Arabidopsis lyrata subsp. lyrata] gi|297312594|gb|EFH43018.1| ribosomal RNA adenine dimethylase family protein [Arabidopsis lyrata subsp. lyrata] Length = 376 Score = 39.7 bits (91), Expect = 0.49, Method: Compositional matrix adjust. Identities = 20/74 (27%), Positives = 40/74 (54%), Gaps = 2/74 (2%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +L++G GTG + + LL+ + V V++ + +EI + +G + + +Q D + Sbjct: 86 VLEIGPGTGNLTMKLLEAAQDV--VAVELDKRMVEILRKRVSDHGFAHKLTIIQKDVLKT 143 Query: 161 VEGLFDVIVSNPPY 174 FD++V+N PY Sbjct: 144 DFPQFDLVVANIPY 157 >gi|295692844|ref|YP_003601454.1| ribosomal protein l11 methyltransferase [Lactobacillus crispatus ST1] gi|312977234|ref|ZP_07788982.1| ribosomal protein L11 methyltransferase [Lactobacillus crispatus CTV-05] gi|295030950|emb|CBL50429.1| Ribosomal protein L11 methyltransferase [Lactobacillus crispatus ST1] gi|310895665|gb|EFQ44731.1| ribosomal protein L11 methyltransferase [Lactobacillus crispatus CTV-05] Length = 314 Score = 39.7 bits (91), Expect = 0.49, Method: Compositional matrix adjust. Identities = 23/73 (31%), Positives = 42/73 (57%), Gaps = 2/73 (2%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 + ++D+GTG+G + +A K + DIS +++ AK NA N ++ T ++ Sbjct: 178 MNVVDVGTGSGILAIAASKLGA-TDVLATDISDESMTAAKQNAALNDIN-NIHTQKTSLL 235 Query: 159 SSVEGLFDVIVSN 171 + V+G FD+IV+N Sbjct: 236 ADVKGKFDIIVAN 248 >gi|256843050|ref|ZP_05548538.1| 50S ribosomal protein L11 methyltransferase [Lactobacillus crispatus 125-2-CHN] gi|256614470|gb|EEU19671.1| 50S ribosomal protein L11 methyltransferase [Lactobacillus crispatus 125-2-CHN] Length = 314 Score = 39.7 bits (91), Expect = 0.49, Method: Compositional matrix adjust. Identities = 23/73 (31%), Positives = 42/73 (57%), Gaps = 2/73 (2%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 + ++D+GTG+G + +A K + DIS +++ AK NA N ++ T ++ Sbjct: 178 MNVVDVGTGSGILAIAASKLGA-TDVLATDISDESMTAAKQNAALNDIN-NIHTQKTSLL 235 Query: 159 SSVEGLFDVIVSN 171 + V+G FD+IV+N Sbjct: 236 ADVKGKFDIIVAN 248 >gi|227879056|ref|ZP_03996946.1| ribosomal protein L11 methyltransferase [Lactobacillus crispatus JV-V01] gi|262046024|ref|ZP_06018988.1| 50S ribosomal protein L11 methyltransferase [Lactobacillus crispatus MV-3A-US] gi|293381313|ref|ZP_06627316.1| ribosomal protein L11 methyltransferase [Lactobacillus crispatus 214-1] gi|227861351|gb|EEJ68980.1| ribosomal protein L11 methyltransferase [Lactobacillus crispatus JV-V01] gi|260573983|gb|EEX30539.1| 50S ribosomal protein L11 methyltransferase [Lactobacillus crispatus MV-3A-US] gi|290922129|gb|EFD99128.1| ribosomal protein L11 methyltransferase [Lactobacillus crispatus 214-1] Length = 314 Score = 39.7 bits (91), Expect = 0.49, Method: Compositional matrix adjust. Identities = 23/73 (31%), Positives = 42/73 (57%), Gaps = 2/73 (2%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 + ++D+GTG+G + +A K + DIS +++ AK NA N ++ T ++ Sbjct: 178 MNVVDVGTGSGILAIAASKLGA-TDVLATDISDESMTAAKQNAALNDIN-NIHTQKTSLL 235 Query: 159 SSVEGLFDVIVSN 171 + V+G FD+IV+N Sbjct: 236 ADVKGKFDIIVAN 248 >gi|294630601|ref|ZP_06709161.1| transferase [Streptomyces sp. e14] gi|292833934|gb|EFF92283.1| transferase [Streptomyces sp. e14] Length = 506 Score = 39.7 bits (91), Expect = 0.49, Method: Compositional matrix adjust. Identities = 41/132 (31%), Positives = 56/132 (42%), Gaps = 16/132 (12%) Query: 95 KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154 +R V LD+GTG+G L + + + D++ +AL I +G D Q Sbjct: 163 RRPVGSALDVGTGSGIQALHAGRHA--TRVTATDVNPRALHITALTLALSGAPA-ADLRQ 219 Query: 155 SDWFSSV-EG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212 F + EG FD+IVSNPP+ VI L R DGG+ G RTI Sbjct: 220 GSLFEPLREGETFDLIVSNPPF---VISPGARLTYR--------DGGMGGDDLCRTIVQQ 268 Query: 213 VSRHLNKDGLCS 224 LN+ G Sbjct: 269 SGERLNEGGFAQ 280 >gi|256850298|ref|ZP_05555727.1| ribosomal protein L11 methyltransferase [Lactobacillus crispatus MV-1A-US] gi|256712935|gb|EEU27927.1| ribosomal protein L11 methyltransferase [Lactobacillus crispatus MV-1A-US] Length = 314 Score = 39.7 bits (91), Expect = 0.49, Method: Compositional matrix adjust. Identities = 23/73 (31%), Positives = 42/73 (57%), Gaps = 2/73 (2%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 + ++D+GTG+G + +A K + DIS +++ AK NA N ++ T ++ Sbjct: 178 MNVVDVGTGSGILAIAASKLGA-TDVLATDISDESMTAAKQNAALNDIN-NIHTQKTSLL 235 Query: 159 SSVEGLFDVIVSN 171 + V+G FD+IV+N Sbjct: 236 ADVKGKFDIIVAN 248 >gi|258404841|ref|YP_003197583.1| methyltransferase small [Desulfohalobium retbaense DSM 5692] gi|257797068|gb|ACV68005.1| methyltransferase small [Desulfohalobium retbaense DSM 5692] Length = 249 Score = 39.7 bits (91), Expect = 0.49, Method: Compositional matrix adjust. Identities = 25/83 (30%), Positives = 40/83 (48%), Gaps = 7/83 (8%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 ++LDLG G G V L P + GVD + + + A+ NA G+ +R +++D Sbjct: 39 TQVLDLGAGCGVVGFGLALRQPGIQLTGVDCNPEMVAAARENAARLGLEQRAVFVEADAA 98 Query: 159 ---SSVEGL----FDVIVSNPPY 174 + L F ++V NPPY Sbjct: 99 LVRDTATPLDPESFPLVVCNPPY 121 >gi|227893571|ref|ZP_04011376.1| possible site-specific DNA-methyltransferase (adenine-specific) [Lactobacillus ultunensis DSM 16047] gi|227864623|gb|EEJ72044.1| possible site-specific DNA-methyltransferase (adenine-specific) [Lactobacillus ultunensis DSM 16047] Length = 565 Score = 39.7 bits (91), Expect = 0.49, Method: Compositional matrix adjust. Identities = 36/140 (25%), Positives = 57/140 (40%), Gaps = 21/140 (15%) Query: 72 FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG------- 124 + P+ +ELL +L + + + D G+G++ L K G Sbjct: 224 YTPQKVSELLT----KLTLVNKNYPNGMTVYDPAMGSGSLLLNFRKYIEDVGGKENEVIY 279 Query: 125 VGVDISCKALEIAKSNAVTNGVSE------RFDTLQSDWFSSVEGLFDVIVSNPPYIESV 178 G +I+ +AK N + +GV DTL DW + +FD +V NPPY + Sbjct: 280 YGQEINMSTFNLAKMNMILHGVDSSNQHLRNGDTLDEDWPPLSQTMFDSVVMNPPYSQHW 339 Query: 179 IVDCLGLEVRDFDPRISLDG 198 + L+ DPR S G Sbjct: 340 SANKGFLQ----DPRFSPYG 355 >gi|170756863|ref|YP_001779688.1| hypothetical protein CLD_0725 [Clostridium botulinum B1 str. Okra] gi|169122075|gb|ACA45911.1| conserved hypothetical protein [Clostridium botulinum B1 str. Okra] Length = 246 Score = 39.7 bits (91), Expect = 0.49, Method: Compositional matrix adjust. Identities = 24/97 (24%), Positives = 51/97 (52%), Gaps = 6/97 (6%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 +D+ L + P I ++ +++DL +GTG + L ++ +G++I + ++AK + Sbjct: 32 IDAVLLANFPTI--KNGAKVVDLCSGTGIIPFILAGKTNASNIIGIEIQKEIADMAKRSI 89 Query: 142 VTNGVSERFDTLQSDW--FSSVEGL--FDVIVSNPPY 174 N + E+ ++ D ++G+ DV+ NPPY Sbjct: 90 KYNNLQEKVRFIEGDLKNLKLLKGIEKVDVVTVNPPY 126 >gi|162447040|ref|YP_001620172.1| ribosomal RNA small subunit methyltransferase C [Acholeplasma laidlawii PG-8A] gi|161985147|gb|ABX80796.1| ribosomal RNA small subunit methyltransferase C [Acholeplasma laidlawii PG-8A] Length = 197 Score = 39.7 bits (91), Expect = 0.49, Method: Compositional matrix adjust. Identities = 28/73 (38%), Positives = 40/73 (54%), Gaps = 2/73 (2%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LD+G+G G + + L K P +DI+ +ALE+ N N V +S+ FS Sbjct: 61 LLDVGSGIGVIGIILKKVHPNLDVTQIDINTRALELNIKNNKLNQVETT--VYESNLFSH 118 Query: 161 VEGLFDVIVSNPP 173 V+ FD IVSNPP Sbjct: 119 VDKTFDCIVSNPP 131 >gi|169596751|ref|XP_001791799.1| hypothetical protein SNOG_01145 [Phaeosphaeria nodorum SN15] gi|160707366|gb|EAT90794.2| hypothetical protein SNOG_01145 [Phaeosphaeria nodorum SN15] Length = 830 Score = 39.7 bits (91), Expect = 0.49, Method: Compositional matrix adjust. Identities = 44/183 (24%), Positives = 78/183 (42%), Gaps = 52/183 (28%) Query: 99 VRILDLGTGTGAVCLALL--------KESPFFKGVGVDISCKALEIAKSN-----AVTNG 145 +R+LDL TGTG C+ LL ++ + + VD+S +AL +A+ N A G Sbjct: 124 LRLLDLCTGTG--CIPLLFRHELYSARQDVHLRALAVDVSEEALALARHNLRSVDASRAG 181 Query: 146 VSE------RFDTLQSDWFSSVEG---------------LFDVIVSNPPYI-ESVIVDCL 183 + + D L + V G +D+++SNPPYI S Sbjct: 182 TKQDRIHLLKADVLLDPFADQVTGAPSLKAAMNDYRQPPFWDILISNPPYISPSDYWKTT 241 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 VR ++P+++L S H+ D + + + Y++ +D+ R E++ Sbjct: 242 TRSVRGYEPKLAL-------------VPPQSPHI--DDIQTADAFYSRLLDIARDVEAKI 286 Query: 244 LFL 246 + L Sbjct: 287 VLL 289 >gi|9280295|dbj|BAB01750.1| N6-DNA-methyltransferase-like protein [Arabidopsis thaliana] Length = 246 Score = 39.7 bits (91), Expect = 0.49, Method: Compositional matrix adjust. Identities = 36/124 (29%), Positives = 61/124 (49%), Gaps = 12/124 (9%) Query: 63 VRLTLSS-DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL----K 117 +RL S + +EP ++ LVD+ LA IE + +++G G+G V +L+ Sbjct: 8 IRLVSSHREVYEPCDDSFALVDALLADRTNLIEHNPKI-CMEIGCGSGYVITSLILLLQN 66 Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPP 173 E P + +D + A + K +GV+ D + +D + +E G DVIV NPP Sbjct: 67 EVPGVHYLAIDTNPIATRVTKETLEAHGVNA--DVICADLATGLEKRLAGSVDVIVVNPP 124 Query: 174 YIES 177 Y+ + Sbjct: 125 YVPT 128 >gi|295425584|ref|ZP_06818271.1| methyltransferase domain protein [Lactobacillus amylolyticus DSM 11664] gi|295064600|gb|EFG55521.1| methyltransferase domain protein [Lactobacillus amylolyticus DSM 11664] Length = 205 Score = 39.3 bits (90), Expect = 0.50, Method: Compositional matrix adjust. Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 3/75 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 ILD+GTG G + L K P VD++ + L++AK NA N + + + SD ++ Sbjct: 67 ILDVGTGYGPLGLFAAKFWPNQTVEMVDVNERGLKLAKRNAQLNHI-DNVEIYSSDVYAQ 125 Query: 161 VE--GLFDVIVSNPP 173 V+ F +I++NPP Sbjct: 126 VDKSKKFGLIITNPP 140 >gi|18309261|ref|NP_561195.1| hypothetical protein CPE0279 [Clostridium perfringens str. 13] gi|168207833|ref|ZP_02633838.1| conserved hypothetical protein [Clostridium perfringens E str. JGS1987] gi|18143937|dbj|BAB79985.1| conserved hypothetical protein [Clostridium perfringens str. 13] gi|170660846|gb|EDT13529.1| conserved hypothetical protein [Clostridium perfringens E str. JGS1987] Length = 256 Score = 39.3 bits (90), Expect = 0.50, Method: Compositional matrix adjust. Identities = 27/97 (27%), Positives = 46/97 (47%), Gaps = 6/97 (6%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 VD+ L + + ++ V LDL TGTG + + + + VG++I + E+A +A Sbjct: 40 VDAVLLANFANVNRKHSV--LDLCTGTGIIPFIIYGKKNPKEVVGIEIQEEFAEMANRSA 97 Query: 142 VTNGVSERFD----TLQSDWFSSVEGLFDVIVSNPPY 174 N + ++ L+ S FDV+ NPPY Sbjct: 98 KINNIEDKVSFVCGDLKDKELSKSMPKFDVVTVNPPY 134 >gi|304321920|ref|YP_003855563.1| 50S ribosomal protein L11 methyltransferase [Parvularcula bermudensis HTCC2503] gi|303300822|gb|ADM10421.1| ribosomal protein L11 methyltransferase, putative [Parvularcula bermudensis HTCC2503] Length = 297 Score = 39.3 bits (90), Expect = 0.50, Method: Compositional matrix adjust. Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 8/88 (9%) Query: 89 SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS- 147 +L + K + R+LDLGTG+G + +A + P + V DI ++ IA NA N Sbjct: 144 ALTALAKGEPRRLLDLGTGSGVLAIAARRLFPEARIVATDIDAPSVAIAAENAALNKAPG 203 Query: 148 ----ERFDTLQSDWFSSVEGLFDVIVSN 171 E Q + EG FD+I++N Sbjct: 204 IVFLEATGVPQE---VAEEGPFDIILAN 228 >gi|312876839|ref|ZP_07736816.1| ribosomal protein L11 methyltransferase [Caldicellulosiruptor lactoaceticus 6A] gi|311796354|gb|EFR12706.1| ribosomal protein L11 methyltransferase [Caldicellulosiruptor lactoaceticus 6A] Length = 304 Score = 39.3 bits (90), Expect = 0.50, Method: Compositional matrix adjust. Identities = 25/73 (34%), Positives = 43/73 (58%), Gaps = 7/73 (9%) Query: 101 ILDLGTGTGAVCLALLKESPFF--KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 +LD+GTG+G + +A K F + + VDI A+++A+ NA NGV + ++D Sbjct: 172 VLDVGTGSGILAIAAKK---FLAKRVLAVDIDEVAVKVAEENARLNGV--EIEIKKNDLV 226 Query: 159 SSVEGLFDVIVSN 171 +E FDV+++N Sbjct: 227 EGIEEKFDVVIAN 239 >gi|298250699|ref|ZP_06974503.1| Methyltransferase type 11 [Ktedonobacter racemifer DSM 44963] gi|297548703|gb|EFH82570.1| Methyltransferase type 11 [Ktedonobacter racemifer DSM 44963] Length = 302 Score = 39.3 bits (90), Expect = 0.50, Method: Compositional matrix adjust. Identities = 21/49 (42%), Positives = 29/49 (59%) Query: 95 KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143 + DV ILD+GTGTG + + + P VGVDIS +LE S++ T Sbjct: 75 RPDVTTILDVGTGTGIWPVEMARLFPQAHIVGVDISAASLEFTSSSSYT 123 >gi|242785309|ref|XP_002480568.1| S-adenosylmethionine-dependent methyltransferase, putative [Talaromyces stipitatus ATCC 10500] gi|218720715|gb|EED20134.1| S-adenosylmethionine-dependent methyltransferase, putative [Talaromyces stipitatus ATCC 10500] Length = 330 Score = 39.3 bits (90), Expect = 0.50, Method: Compositional matrix adjust. Identities = 23/40 (57%), Positives = 31/40 (77%), Gaps = 3/40 (7%) Query: 101 ILDLGTGTGAVCLALLKESPFFKG--VGVDISCKALEIAK 138 ILDLGTG G++ LALL++ FKG VGVD S K++E+A+ Sbjct: 98 ILDLGTGNGSM-LALLRKRGGFKGVMVGVDYSEKSVELAR 136 >gi|197103170|ref|YP_002128548.1| SAM-dependent methyltransferase [Phenylobacterium zucineum HLK1] gi|196480446|gb|ACG79973.1| SAM-dependent methyltransferase [Phenylobacterium zucineum HLK1] Length = 233 Score = 39.3 bits (90), Expect = 0.50, Method: Compositional matrix adjust. Identities = 25/72 (34%), Positives = 35/72 (48%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 R+L +G GTGA L+L P + VGVD S + L + + GV +R + LQ Sbjct: 50 ARVLSVGVGTGAEILSLAAAFPGWSFVGVDPSPEMLAVGRRRLEQAGVLQRCELLQGYAG 109 Query: 159 SSVEGLFDVIVS 170 + FD VS Sbjct: 110 DAPREEFDTAVS 121 >gi|284161197|ref|YP_003399820.1| methylase [Archaeoglobus profundus DSM 5631] gi|284011194|gb|ADB57147.1| methylase [Archaeoglobus profundus DSM 5631] Length = 183 Score = 39.3 bits (90), Expect = 0.50, Method: Compositional matrix adjust. Identities = 27/106 (25%), Positives = 53/106 (50%), Gaps = 16/106 (15%) Query: 71 TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130 + P ++ELL++ AL E R+ +L++G G+G V + ++ F + DI+ Sbjct: 8 VYPPAEDSELLLEVALR------EVREDDEVLEVGVGSGFVAEKIKEKCQFL--LATDIN 59 Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE 176 A ++A+ + D +++D + F +I+ NPPY+E Sbjct: 60 PFACKMAREKGI--------DVVRTDLVKGIRKKFTLILFNPPYLE 97 >gi|269966803|ref|ZP_06180876.1| ribosomal protein L11 methyltransferase [Vibrio alginolyticus 40B] gi|269828470|gb|EEZ82731.1| ribosomal protein L11 methyltransferase [Vibrio alginolyticus 40B] Length = 295 Score = 39.3 bits (90), Expect = 0.50, Method: Compositional matrix adjust. Identities = 34/112 (30%), Positives = 57/112 (50%), Gaps = 17/112 (15%) Query: 74 PRPET-ELLVDSALAFS----------LPRIEKRDVV--RILDLGTGTGAVCLALLKESP 120 P P+ +++D LAF L +E D+ ++D G G+G + +A +K Sbjct: 123 PDPDAVNVMLDPGLAFGTGTHPTTALCLEWLESMDLSGKTVIDFGCGSGILAIAAIKLG- 181 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF-DVIVSN 171 K +G+DI +AL +K NA NGV+++ + + EGL DV+V+N Sbjct: 182 AEKVIGIDIDPQALLASKDNAERNGVADKLEVYLPQ--NQPEGLVADVVVAN 231 >gi|302549517|ref|ZP_07301859.1| methyltransferase type 11 [Streptomyces viridochromogenes DSM 40736] gi|302467135|gb|EFL30228.1| methyltransferase type 11 [Streptomyces viridochromogenes DSM 40736] Length = 288 Score = 39.3 bits (90), Expect = 0.50, Method: Compositional matrix adjust. Identities = 29/97 (29%), Positives = 45/97 (46%), Gaps = 10/97 (10%) Query: 75 RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134 RP +LLV++ + R+LD+G GTG + A+ + VGVDIS + Sbjct: 40 RPFEDLLVEA--------MASERAGRVLDVGCGTGGITRAVARR--VGPCVGVDISGPMI 89 Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSN 171 E A++ A GV F + + G FD ++S Sbjct: 90 EAARAWAEREGVPASFVRADAQEHAFEPGTFDAVISR 126 >gi|168026308|ref|XP_001765674.1| predicted protein [Physcomitrella patens subsp. patens] gi|162683100|gb|EDQ69513.1| predicted protein [Physcomitrella patens subsp. patens] Length = 284 Score = 39.3 bits (90), Expect = 0.50, Method: Compositional matrix adjust. Identities = 32/115 (27%), Positives = 58/115 (50%), Gaps = 10/115 (8%) Query: 70 DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL---LKESPFFKGVG 126 D +EP ++ LVD+ LA +E+R + L++G G+G V +L L + + Sbjct: 53 DVYEPCDDSFALVDALLADKANLVERRPKL-CLEVGCGSGYVITSLALILADECHAQFFA 111 Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIES 177 DIS A ++ + +G+ + D + +D +E G DV++ NPPY+ + Sbjct: 112 TDISQTAAQVTRETLSAHGL--QADVVVTDLVHGLEKRLAGSVDVLLFNPPYVPT 164 >gi|91228891|ref|ZP_01262793.1| ribosomal protein L11 methyltransferase [Vibrio alginolyticus 12G01] gi|91187556|gb|EAS73886.1| ribosomal protein L11 methyltransferase [Vibrio alginolyticus 12G01] Length = 295 Score = 39.3 bits (90), Expect = 0.50, Method: Compositional matrix adjust. Identities = 34/112 (30%), Positives = 57/112 (50%), Gaps = 17/112 (15%) Query: 74 PRPET-ELLVDSALAFS----------LPRIEKRDVV--RILDLGTGTGAVCLALLKESP 120 P P+ +++D LAF L +E D+ ++D G G+G + +A +K Sbjct: 123 PDPDAVNVMLDPGLAFGTGTHPTTALCLEWLESMDLSGKTVIDFGCGSGILAIAAIKLG- 181 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF-DVIVSN 171 K +G+DI +AL +K NA NGV+++ + + EGL DV+V+N Sbjct: 182 AEKVIGIDIDPQALLASKDNAERNGVADKLEVYLPQ--NQPEGLVADVVVAN 231 >gi|51012781|gb|AAT92684.1| YIL064W [Saccharomyces cerevisiae] Length = 257 Score = 39.3 bits (90), Expect = 0.50, Method: Compositional matrix adjust. Identities = 46/185 (24%), Positives = 86/185 (46%), Gaps = 22/185 (11%) Query: 69 SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128 SD+ + + LVD+ A+ RI + ++DLGTG+G + L + K VG+D Sbjct: 70 SDSDAEQKMIDFLVDNIGAY---RISEN--ASVVDLGTGSGHMLFELHQTEFQGKLVGID 124 Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSS--VEGLFDVIVSNPPYIESVIVDCLGLE 186 S +++++A + A GV Q+D FS G +D++ ++ +D + L Sbjct: 125 YSEESVKLASNIAEATGVDNFISFQQADIFSGDWKPGKYDIV------LDKGTLDAISL- 177 Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246 + ++G +D + Y + V R L KDG+ + + ++V+I E+ L + Sbjct: 178 -----SGMKINGKLDVVDVYAGV---VERILKKDGIFLITSCNFTQDELVKIIETDNLKM 229 Query: 247 VNAFK 251 K Sbjct: 230 WKTIK 234 >gi|304396992|ref|ZP_07378872.1| ribosomal protein L11 methyltransferase [Pantoea sp. aB] gi|304355788|gb|EFM20155.1| ribosomal protein L11 methyltransferase [Pantoea sp. aB] Length = 293 Score = 39.3 bits (90), Expect = 0.51, Method: Compositional matrix adjust. Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 10/65 (15%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---------D 151 ++D G G+G + +A LK + +G+DI +A++ ++ NA NGVS+R D Sbjct: 162 VIDFGCGSGILAIAALKLG-AAQAIGIDIDPQAIQASRDNAERNGVSDRLSLYLPHQQPD 220 Query: 152 TLQSD 156 LQ+D Sbjct: 221 NLQAD 225 >gi|294851395|ref|ZP_06792068.1| ribosomal RNA small subunit methyltransferase C [Brucella sp. NVSL 07-0026] gi|294819984|gb|EFG36983.1| ribosomal RNA small subunit methyltransferase C [Brucella sp. NVSL 07-0026] Length = 340 Score = 39.3 bits (90), Expect = 0.51, Method: Compositional matrix adjust. Identities = 30/114 (26%), Positives = 50/114 (43%), Gaps = 8/114 (7%) Query: 73 EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV-DISC 131 EP + +D A +EK + DLG G G + LK + K + + + Sbjct: 172 EPGMFSHGAIDKGSALLARHMEKIVFGNVADLGAGWGYLAAQCLKYADRIKNIDLYEADY 231 Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWF----SSVEGLFDVIVSNPPYIESVIVD 181 +ALE A+ N G S + +WF + G++D ++ NPP+ E + D Sbjct: 232 EALEAARGNLERLGAS---IPISFNWFDVTSEKIAGIYDTVIMNPPFHEGRVTD 282 >gi|283477517|emb|CAY73433.1| Uncharacterized protein yfiC [Erwinia pyrifoliae DSM 12163] Length = 245 Score = 39.3 bits (90), Expect = 0.51, Method: Compositional matrix adjust. Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 4/82 (4%) Query: 97 DVVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQS 155 +V R LD+G+G+G + L L + + + V++ A A+ N + ++ Q+ Sbjct: 44 NVQRALDIGSGSGLIALMLAQRTADRVHIDAVELDEAAALQAQENVAASPWPDKVRVQQA 103 Query: 156 D---WFSSVEGLFDVIVSNPPY 174 D W E + +IVSNPPY Sbjct: 104 DIVEWTQRCEHRYSLIVSNPPY 125 >gi|261381312|ref|ZP_05985885.1| ribosomal protein L11 methyltransferase [Neisseria subflava NJ9703] gi|284795802|gb|EFC51149.1| ribosomal protein L11 methyltransferase [Neisseria subflava NJ9703] Length = 295 Score = 39.3 bits (90), Expect = 0.51, Method: Compositional matrix adjust. Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 11/74 (14%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDW 157 +LD G G+G + +A LK +GVDI +A+ +K NA N V +F D L Sbjct: 167 VLDYGCGSGILAIAALKLGAG-SAIGVDIDEQAIRASKDNAAQNNVDAQFYLPDGLP--- 222 Query: 158 FSSVEGLFDVIVSN 171 +G FDV+V+N Sbjct: 223 ----QGQFDVVVAN 232 >gi|168211815|ref|ZP_02637440.1| conserved hypothetical protein [Clostridium perfringens B str. ATCC 3626] gi|170710232|gb|EDT22414.1| conserved hypothetical protein [Clostridium perfringens B str. ATCC 3626] Length = 256 Score = 39.3 bits (90), Expect = 0.51, Method: Compositional matrix adjust. Identities = 26/97 (26%), Positives = 47/97 (48%), Gaps = 6/97 (6%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 VD+ L + + ++ V LDL TGTG + + + + VG++I + E+A +A Sbjct: 40 VDAVLLANFANVNRKHSV--LDLCTGTGIIPFIIYGKKNPKEVVGIEIQEEFAEMANRSA 97 Query: 142 VTNGVSERFD----TLQSDWFSSVEGLFDVIVSNPPY 174 N + ++ L+ + + FDV+ NPPY Sbjct: 98 KINNIEDKVSFVCGDLKDKELNKLMPKFDVVTVNPPY 134 >gi|110800155|ref|YP_694735.1| hypothetical protein CPF_0275 [Clostridium perfringens ATCC 13124] gi|110674802|gb|ABG83789.1| conserved hypothetical protein [Clostridium perfringens ATCC 13124] Length = 249 Score = 39.3 bits (90), Expect = 0.51, Method: Compositional matrix adjust. Identities = 26/97 (26%), Positives = 47/97 (48%), Gaps = 6/97 (6%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 VD+ L + + ++ V LDL TGTG + + + + VG++I + E+A +A Sbjct: 33 VDAVLLANFANVNRKHSV--LDLCTGTGIIPFIIYGKKNPKEVVGIEIQEEFAEMANRSA 90 Query: 142 VTNGVSERFD----TLQSDWFSSVEGLFDVIVSNPPY 174 N + ++ L+ + + FDV+ NPPY Sbjct: 91 KINNIEDKVSFVCGDLKDKELNKLMPKFDVVTVNPPY 127 >gi|254718208|ref|ZP_05180019.1| methyltransferase [Brucella sp. 83/13] gi|265983165|ref|ZP_06095900.1| methyltransferase small [Brucella sp. 83/13] gi|306839948|ref|ZP_07472742.1| methyltransferase small [Brucella sp. NF 2653] gi|264661757|gb|EEZ32018.1| methyltransferase small [Brucella sp. 83/13] gi|306404912|gb|EFM61197.1| methyltransferase small [Brucella sp. NF 2653] Length = 340 Score = 39.3 bits (90), Expect = 0.51, Method: Compositional matrix adjust. Identities = 30/114 (26%), Positives = 50/114 (43%), Gaps = 8/114 (7%) Query: 73 EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV-DISC 131 EP + +D A +EK + DLG G G + LK + K + + + Sbjct: 172 EPGMFSHGAIDKGSALLARHMEKIVFGNVADLGAGWGYLAAQCLKYADRIKNIDLYEADY 231 Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWF----SSVEGLFDVIVSNPPYIESVIVD 181 +ALE A+ N G S + +WF + G++D ++ NPP+ E + D Sbjct: 232 EALEAARGNLERLGAS---IPISFNWFDVTSEKIAGIYDTVIMNPPFHEGRVTD 282 >gi|225077502|ref|ZP_03720701.1| hypothetical protein NEIFLAOT_02565 [Neisseria flavescens NRL30031/H210] gi|224951164|gb|EEG32373.1| hypothetical protein NEIFLAOT_02565 [Neisseria flavescens NRL30031/H210] Length = 295 Score = 39.3 bits (90), Expect = 0.51, Method: Compositional matrix adjust. Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 11/74 (14%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDW 157 +LD G G+G + +A LK +GVDI +A+ +K NA N V +F D L Sbjct: 167 VLDYGCGSGILAIAALKLGAG-SAIGVDIDEQAIRASKDNAAQNNVDAQFYLPDGLP--- 222 Query: 158 FSSVEGLFDVIVSN 171 +G FDV+V+N Sbjct: 223 ----QGQFDVVVAN 232 >gi|212711053|ref|ZP_03319181.1| hypothetical protein PROVALCAL_02122 [Providencia alcalifaciens DSM 30120] gi|212686221|gb|EEB45749.1| hypothetical protein PROVALCAL_02122 [Providencia alcalifaciens DSM 30120] Length = 306 Score = 39.3 bits (90), Expect = 0.51, Method: Compositional matrix adjust. Identities = 39/129 (30%), Positives = 59/129 (45%), Gaps = 22/129 (17%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159 ++D G G+G + +A LK +G+DI +A+ ++ NA NGVSER L D Sbjct: 174 VIDFGCGSGILAIAALKLG-AAHAIGIDIDPQAILASRDNAERNGVSERLSLYLPKDQPQ 232 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL---DGGIDGL-----SHYRTIAD 211 ++ DV+V+N L +R+ P IS+ GG GL S ++AD Sbjct: 233 DLQA--DVVVAN----------ILAGPLRELAPMISVLPRVGGHLGLSGVLASQAESVAD 280 Query: 212 GVSRHLNKD 220 N D Sbjct: 281 AYRADFNID 289 >gi|182434921|ref|YP_001822640.1| hypothetical protein SGR_1128 [Streptomyces griseus subsp. griseus NBRC 13350] gi|178463437|dbj|BAG17957.1| hypothetical protein [Streptomyces griseus subsp. griseus NBRC 13350] Length = 310 Score = 39.3 bits (90), Expect = 0.51, Method: Compositional matrix adjust. Identities = 26/68 (38%), Positives = 38/68 (55%), Gaps = 2/68 (2%) Query: 89 SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148 LP K V R+LD+G+G G V L + P + V VD + L+ AK A G+S+ Sbjct: 62 GLPTAPK--VRRVLDIGSGPGVVSCLLAEVFPEAEVVAVDATPALLDRAKDRARRLGLSD 119 Query: 149 RFDTLQSD 156 RF TL+++ Sbjct: 120 RFRTLEAE 127 >gi|148555871|ref|YP_001263453.1| cyclopropane-fatty-acyl-phospholipid synthase [Sphingomonas wittichii RW1] gi|148501061|gb|ABQ69315.1| cyclopropane-fatty-acyl-phospholipid synthase [Sphingomonas wittichii RW1] Length = 408 Score = 39.3 bits (90), Expect = 0.51, Method: Compositional matrix adjust. Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 9/90 (10%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+LD+G G G + L L + +G+ +S + L++A+ A GVS+R D + Sbjct: 180 RVLDIGCGWGGMAL-YLNRAADVDVLGITLSEEQLKVARERAAAAGVSDRVRFELID-YR 237 Query: 160 SVEGLFDVIVS-------NPPYIESVIVDC 182 ++EG FD IVS P E+ + C Sbjct: 238 ALEGKFDRIVSVGMFEHVGVPQYETFFMKC 267 >gi|56750156|ref|YP_170857.1| membrane-associated protein [Synechococcus elongatus PCC 6301] gi|56685115|dbj|BAD78337.1| membrane-associated protein [Synechococcus elongatus PCC 6301] Length = 211 Score = 39.3 bits (90), Expect = 0.51, Method: Compositional matrix adjust. Identities = 26/90 (28%), Positives = 43/90 (47%), Gaps = 3/90 (3%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 + + + +L RI +LDLG GTG++ L + P K G+DIS L IA+ Sbjct: 27 IHATIQETLKRITISSQASVLDLGCGTGSLLQQLAAQYPTVKLSGLDISAAMLAIARQKL 86 Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSN 171 S + T +++ E FD+++S Sbjct: 87 PD---SVKLQTGEANELPFPEHHFDLVIST 113 >gi|323498781|ref|ZP_08103767.1| ribosomal protein L11 methyltransferase [Vibrio sinaloensis DSM 21326] gi|323316143|gb|EGA69168.1| ribosomal protein L11 methyltransferase [Vibrio sinaloensis DSM 21326] Length = 295 Score = 39.3 bits (90), Expect = 0.52, Method: Compositional matrix adjust. Identities = 34/112 (30%), Positives = 58/112 (51%), Gaps = 17/112 (15%) Query: 74 PRPET-ELLVDSALAFS----------LPRIEKRDVV--RILDLGTGTGAVCLALLKESP 120 P P+ +++D LAF L +E D+ ++D G G+G + +A +K Sbjct: 123 PEPDAVNVMLDPGLAFGTGTHPTTALCLEWLEGLDLTGKTVIDFGCGSGILAIAAIKLG- 181 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFSSVEGLFDVIVSN 171 K +G+DI +AL +K NA NGV+E+ + L D + + + DV+V+N Sbjct: 182 AEKVIGIDIDPQALLASKDNAERNGVAEQLEVFLPQDQPAGL--IADVVVAN 231 >gi|237744130|ref|ZP_04574611.1| methyltransferase [Fusobacterium sp. 7_1] gi|260494285|ref|ZP_05814416.1| RsmD family RNA methyltransferase [Fusobacterium sp. 3_1_33] gi|229431359|gb|EEO41571.1| methyltransferase [Fusobacterium sp. 7_1] gi|260198431|gb|EEW95947.1| RsmD family RNA methyltransferase [Fusobacterium sp. 3_1_33] Length = 182 Score = 39.3 bits (90), Expect = 0.52, Method: Compositional matrix adjust. Identities = 33/126 (26%), Positives = 58/126 (46%), Gaps = 10/126 (7%) Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 R+ + F+ RP E + +S + P IE LDL +G+G++ L + + Sbjct: 11 RIIKTRKGFDTRPTLESVKESLFSIITPYIEGS---VFLDLFSGSGSISLEAISRGAK-R 66 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPPYIES 177 V ++ +AL+ N G S+R ++D ++E L FD+I +PPY ++ Sbjct: 67 AVMIEKDGEALKYIIENIDNLGFSDRCRAYKNDVIRAIEILGRKNEKFDIIFMDPPYQDN 126 Query: 178 VIVDCL 183 V L Sbjct: 127 VTKKVL 132 >gi|297618670|ref|YP_003706775.1| hypothetical protein Mvol_0142 [Methanococcus voltae A3] gi|297377647|gb|ADI35802.1| protein of unknown function Met10 [Methanococcus voltae A3] Length = 411 Score = 39.3 bits (90), Expect = 0.52, Method: Compositional matrix adjust. Identities = 27/82 (32%), Positives = 47/82 (57%), Gaps = 11/82 (13%) Query: 100 RILDLGTGTGAVCL-ALLKESPFFKGVGVDISCKALEIAKSNAVTNGV-SERFDTLQSDW 157 ++LD+ + TG + A +K + VD+S KALE AK N NG+ S++++ + D Sbjct: 239 KVLDICSYTGGFAVHAGIKGAEI---TSVDMSEKALEFAKENMELNGIGSDKYNGICGDA 295 Query: 158 FSSVEGL------FDVIVSNPP 173 FS ++ + FDV++ +PP Sbjct: 296 FSIMKEMINRGEKFDVVILDPP 317 >gi|117164676|emb|CAJ88222.1| putative methyltransferase [Streptomyces ambofaciens ATCC 23877] Length = 243 Score = 39.3 bits (90), Expect = 0.52, Method: Compositional matrix adjust. Identities = 27/73 (36%), Positives = 39/73 (53%), Gaps = 3/73 (4%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 +R+LDLG GTGA LALL+ +P + VD S L A + V RF L ++ Sbjct: 50 LRVLDLGCGTGASTLALLRAAPRARITAVDASAGMLRRALAKPWPARV--RFLHLTAEEV 107 Query: 159 SSV-EGLFDVIVS 170 ++ EG FD + + Sbjct: 108 ATAGEGPFDAVFA 120 >gi|108760929|ref|YP_634776.1| trans-aconitate methyltransferase [Myxococcus xanthus DK 1622] gi|108464809|gb|ABF89994.1| trans-aconitate methyltransferase [Myxococcus xanthus DK 1622] Length = 255 Score = 39.3 bits (90), Expect = 0.52, Method: Compositional matrix adjust. Identities = 28/83 (33%), Positives = 41/83 (49%), Gaps = 5/83 (6%) Query: 90 LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 L R++ ++ DLG GTG + L + P + GVD S + +E A+ A V R Sbjct: 22 LSRVDAASPSQVADLGCGTGDLTRVLAERWPSAQVSGVDASSEMIEAARRGAPVGSV--R 79 Query: 150 FDTLQ-SDWFSSVEGLFDVIVSN 171 F+ +DW S DV+VSN Sbjct: 80 FEVADLADWAPSAP--LDVLVSN 100 >gi|23503017|ref|NP_699144.1| methyltransferase [Brucella suis 1330] gi|225626534|ref|ZP_03784573.1| methyltransferase [Brucella ceti str. Cudo] gi|254705169|ref|ZP_05166997.1| methyltransferase [Brucella suis bv. 3 str. 686] gi|254707315|ref|ZP_05169143.1| methyltransferase [Brucella pinnipedialis M163/99/10] gi|254709145|ref|ZP_05170956.1| methyltransferase [Brucella pinnipedialis B2/94] gi|254713430|ref|ZP_05175241.1| methyltransferase [Brucella ceti M644/93/1] gi|254716213|ref|ZP_05178024.1| methyltransferase [Brucella ceti M13/05/1] gi|256030670|ref|ZP_05444284.1| methyltransferase [Brucella pinnipedialis M292/94/1] gi|256158671|ref|ZP_05456554.1| methyltransferase [Brucella ceti M490/95/1] gi|256254075|ref|ZP_05459611.1| methyltransferase [Brucella ceti B1/94] gi|256370565|ref|YP_003108076.1| methyltransferase [Brucella microti CCM 4915] gi|260169574|ref|ZP_05756385.1| methyltransferase [Brucella sp. F5/99] gi|261217987|ref|ZP_05932268.1| methyltransferase small [Brucella ceti M13/05/1] gi|261221216|ref|ZP_05935497.1| methyltransferase [Brucella ceti B1/94] gi|261314797|ref|ZP_05953994.1| methyltransferase small [Brucella pinnipedialis M163/99/10] gi|261316644|ref|ZP_05955841.1| methyltransferase small [Brucella pinnipedialis B2/94] gi|261321163|ref|ZP_05960360.1| methyltransferase small [Brucella ceti M644/93/1] gi|261755874|ref|ZP_05999583.1| methyltransferase small [Brucella suis bv. 3 str. 686] gi|261759101|ref|ZP_06002810.1| methyltransferase small [Brucella sp. F5/99] gi|265987716|ref|ZP_06100273.1| methyltransferase [Brucella pinnipedialis M292/94/1] gi|265997177|ref|ZP_06109734.1| methyltransferase [Brucella ceti M490/95/1] gi|23349058|gb|AAN31059.1| methyltransferase [Brucella suis 1330] gi|225618191|gb|EEH15234.1| methyltransferase [Brucella ceti str. Cudo] gi|256000728|gb|ACU49127.1| methyltransferase [Brucella microti CCM 4915] gi|260919800|gb|EEX86453.1| methyltransferase [Brucella ceti B1/94] gi|260923076|gb|EEX89644.1| methyltransferase small [Brucella ceti M13/05/1] gi|261293853|gb|EEX97349.1| methyltransferase small [Brucella ceti M644/93/1] gi|261295867|gb|EEX99363.1| methyltransferase small [Brucella pinnipedialis B2/94] gi|261303823|gb|EEY07320.1| methyltransferase small [Brucella pinnipedialis M163/99/10] gi|261739085|gb|EEY27081.1| methyltransferase small [Brucella sp. F5/99] gi|261745627|gb|EEY33553.1| methyltransferase small [Brucella suis bv. 3 str. 686] gi|262551645|gb|EEZ07635.1| methyltransferase [Brucella ceti M490/95/1] gi|264659913|gb|EEZ30174.1| methyltransferase [Brucella pinnipedialis M292/94/1] Length = 340 Score = 39.3 bits (90), Expect = 0.52, Method: Compositional matrix adjust. Identities = 30/114 (26%), Positives = 50/114 (43%), Gaps = 8/114 (7%) Query: 73 EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV-DISC 131 EP + +D A +EK + DLG G G + LK + K + + + Sbjct: 172 EPGMFSHGAIDKGSALLARHMEKIVFGNVADLGAGWGYLAAQCLKYADRIKNIDLYEADY 231 Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWF----SSVEGLFDVIVSNPPYIESVIVD 181 +ALE A+ N G S + +WF + G++D ++ NPP+ E + D Sbjct: 232 EALEAARGNLERLGAS---IPISFNWFDVTSEKIAGIYDTVIMNPPFHEGRVTD 282 >gi|323489776|ref|ZP_08095001.1| putative RNA methyltransferase [Planococcus donghaensis MPA1U2] gi|323396514|gb|EGA89335.1| putative RNA methyltransferase [Planococcus donghaensis MPA1U2] Length = 453 Score = 39.3 bits (90), Expect = 0.52, Method: Compositional matrix adjust. Identities = 35/120 (29%), Positives = 62/120 (51%), Gaps = 15/120 (12%) Query: 62 NVRLTLSSDTF-EPRP-ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119 +VR +S+ +F + P +TE+L ALA++ E+ ++D G G + L L + + Sbjct: 273 DVRFEISARSFYQINPVQTEVLYGQALAYAQLTGEET----VIDAYCGIGTISLFLAQRA 328 Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERF------DTLQSDWFSSVEGLFDVIVSNPP 173 F +GV+I +A+E AK NA NG++ + + W+ + DV+V +PP Sbjct: 329 KFV--MGVEIVPQAIEDAKRNAELNGLTNTLFEAGPAEQVIPRWYKEGKKA-DVLVVDPP 385 >gi|312869028|ref|ZP_07729205.1| conserved hypothetical protein [Lactobacillus oris PB013-T2-3] gi|311095454|gb|EFQ53721.1| conserved hypothetical protein [Lactobacillus oris PB013-T2-3] Length = 253 Score = 39.3 bits (90), Expect = 0.52, Method: Compositional matrix adjust. Identities = 32/117 (27%), Positives = 58/117 (49%), Gaps = 11/117 (9%) Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 +VRL S + F +D+ L R +R +R +DL G A+ L L + Sbjct: 21 DVRLIQSPNCFA------FSLDAVLLADFVRPNQRQRLRTVDLCAGNAAIGL-FLHDKLG 73 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ---SDWFSSV-EGLFDVIVSNPPY 174 + + V++ + ++A+ + NG++ER+ L +D FS + + DV++ NPPY Sbjct: 74 GQFIEVELQPRIADMARRSIELNGLAERYQVLNLDIADVFSVIPKDSADVVLCNPPY 130 >gi|261253767|ref|ZP_05946340.1| ribosomal RNA small subunit methyltransferase C [Vibrio orientalis CIP 102891] gi|260937158|gb|EEX93147.1| ribosomal RNA small subunit methyltransferase C [Vibrio orientalis CIP 102891] Length = 376 Score = 39.3 bits (90), Expect = 0.52, Method: Compositional matrix adjust. Identities = 40/158 (25%), Positives = 75/158 (47%), Gaps = 14/158 (8%) Query: 97 DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN-GVSERFDTLQS 155 ++ +LDLG G G + + + + +P K VD S A+E A+ N + N G + + + Sbjct: 230 NLKHVLDLGCGNGVLSVKMGQLNPAIKLTCVDESFMAVESARQNLIQNLGDDREIECIAN 289 Query: 156 DWFSSVE-GLFDVIVSNPPY-IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213 + ++E D+I+ NPP+ + I D + ++ +I GG + + G Sbjct: 290 NCLENLEQNDVDMIMCNPPFHQQQAITDHIAWQMFCDAKQILRVGG-------QLLVIG- 341 Query: 214 SRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK 251 +RHL DG + G K +V + ++K ++ A K Sbjct: 342 NRHLGYDGKLARLFG---KSNVKVVAANKKFVILQATK 376 >gi|254700801|ref|ZP_05162629.1| methyltransferase [Brucella suis bv. 5 str. 513] gi|261751309|ref|ZP_05995018.1| methyltransferase small [Brucella suis bv. 5 str. 513] gi|261741062|gb|EEY28988.1| methyltransferase small [Brucella suis bv. 5 str. 513] Length = 340 Score = 39.3 bits (90), Expect = 0.52, Method: Compositional matrix adjust. Identities = 30/114 (26%), Positives = 50/114 (43%), Gaps = 8/114 (7%) Query: 73 EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV-DISC 131 EP + +D A +EK + DLG G G + LK + K + + + Sbjct: 172 EPGMFSHGAIDKGSALLARHMEKIVFGNVADLGAGWGYLAAQCLKYADRIKNIDLYEADY 231 Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWF----SSVEGLFDVIVSNPPYIESVIVD 181 +ALE A+ N G S + +WF + G++D ++ NPP+ E + D Sbjct: 232 EALEAARGNLERLGAS---IPISFNWFDVTSEKIAGIYDTVIMNPPFHEGRVTD 282 >gi|241759137|ref|ZP_04757245.1| ribosomal protein L11 methyltransferase [Neisseria flavescens SK114] gi|319639456|ref|ZP_07994206.1| ribosomal protein L11 methyltransferase [Neisseria mucosa C102] gi|241320556|gb|EER56833.1| ribosomal protein L11 methyltransferase [Neisseria flavescens SK114] gi|317399351|gb|EFV80022.1| ribosomal protein L11 methyltransferase [Neisseria mucosa C102] Length = 295 Score = 39.3 bits (90), Expect = 0.52, Method: Compositional matrix adjust. Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 11/74 (14%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDW 157 +LD G G+G + +A LK +GVDI +A+ +K NA N V +F D L Sbjct: 167 VLDYGCGSGILAIAALKLGAG-SAIGVDIDEQAIRASKDNAAQNNVDAQFYLPDGLP--- 222 Query: 158 FSSVEGLFDVIVSN 171 +G FDV+V+N Sbjct: 223 ----QGQFDVVVAN 232 >gi|154506231|ref|ZP_02042969.1| hypothetical protein RUMGNA_03773 [Ruminococcus gnavus ATCC 29149] gi|153793730|gb|EDN76150.1| hypothetical protein RUMGNA_03773 [Ruminococcus gnavus ATCC 29149] Length = 559 Score = 39.3 bits (90), Expect = 0.52, Method: Compositional matrix adjust. Identities = 31/78 (39%), Positives = 43/78 (55%), Gaps = 10/78 (12%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWF 158 + DL +GTG + L +P K V GV+I +A+E AK NA NG+S +F + D F Sbjct: 314 VFDLFSGTGTIAQVL---APVAKQVIGVEIIEEAVEAAKENAAHNGLSNCKF--IAGDVF 368 Query: 159 S---SVEGLFDVIVSNPP 173 +E DVIV +PP Sbjct: 369 KVLDEIEEKPDVIVLDPP 386 >gi|81300217|ref|YP_400425.1| membrane-associated protein [Synechococcus elongatus PCC 7942] gi|81169098|gb|ABB57438.1| membrane-associated protein [Synechococcus elongatus PCC 7942] Length = 213 Score = 39.3 bits (90), Expect = 0.52, Method: Compositional matrix adjust. Identities = 26/90 (28%), Positives = 43/90 (47%), Gaps = 3/90 (3%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 + + + +L RI +LDLG GTG++ L + P K G+DIS L IA+ Sbjct: 29 IHATIQETLKRITISSQASVLDLGCGTGSLLQQLAAQYPTVKLSGLDISAAMLAIARQKL 88 Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSN 171 S + T +++ E FD+++S Sbjct: 89 PD---SVKLQTGEANELPFPEHHFDLVIST 115 >gi|284997868|ref|YP_003419635.1| putative methylase [Sulfolobus islandicus L.D.8.5] gi|284445763|gb|ADB87265.1| putative methylase [Sulfolobus islandicus L.D.8.5] Length = 207 Score = 39.3 bits (90), Expect = 0.53, Method: Compositional matrix adjust. Identities = 42/155 (27%), Positives = 71/155 (45%), Gaps = 27/155 (17%) Query: 53 RILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG--A 110 RI+ +R F +L L+ T+EP +T++L++ L ++ K + ++LD+G+G+G Sbjct: 5 RIVEFRGF---KLCLNDQTYEPSDDTDILLN------LLKVGKGE--KVLDMGSGSGILG 53 Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIV 169 + ++ F + + L K N + N S L D S + FDV + Sbjct: 54 IWSLIMGGKVMFVDINPYATTSTLCSLKVNNLYNS-SNYLGVLNCDLLSCLRKYDFDVAI 112 Query: 170 SNPPYIESVIVDCLGLEVRDFDPRI--SLDGGIDG 202 NPPY L V +++ I S GG DG Sbjct: 113 FNPPY----------LPVEEYNEWIGYSWSGGKDG 137 >gi|255583924|ref|XP_002532710.1| n6-DNA-methyltransferase, putative [Ricinus communis] gi|223527556|gb|EEF29677.1| n6-DNA-methyltransferase, putative [Ricinus communis] Length = 256 Score = 39.3 bits (90), Expect = 0.53, Method: Compositional matrix adjust. Identities = 33/123 (26%), Positives = 62/123 (50%), Gaps = 8/123 (6%) Query: 62 NVRLTLS-SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAV----CLALL 116 +RL S + +EP ++ LVD+ LA + ++ V ++G G+G V L L Sbjct: 7 QIRLVSSHPEVYEPCDDSFALVDALLADRINLLDHNPKV-CFEVGCGSGYVITSLALMLR 65 Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGV-SERFDT-LQSDWFSSVEGLFDVIVSNPPY 174 ++ P + D++ A+ + + +GV +E T + S ++G+ DV+V NPPY Sbjct: 66 QQIPGVYYIATDLNPHAVRVTRETLEAHGVHAELISTDIASGLEKRLQGMVDVMVVNPPY 125 Query: 175 IES 177 + + Sbjct: 126 VPT 128 >gi|307151735|ref|YP_003887119.1| type 11 methyltransferase [Cyanothece sp. PCC 7822] gi|306981963|gb|ADN13844.1| Methyltransferase type 11 [Cyanothece sp. PCC 7822] Length = 285 Score = 39.3 bits (90), Expect = 0.53, Method: Compositional matrix adjust. Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 5/61 (8%) Query: 92 RIEKRDVV-----RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146 R E D++ ILDLG GTG+ L L + P + +G+D+S L +AK A T G+ Sbjct: 89 RTEAIDIIGGQPRNILDLGCGTGSTTLILKQRFPDAQVMGIDLSPYMLAMAKYKAATAGL 148 Query: 147 S 147 + Sbjct: 149 N 149 >gi|119719784|ref|YP_920279.1| putative methylase [Thermofilum pendens Hrk 5] gi|119524904|gb|ABL78276.1| putative methylase [Thermofilum pendens Hrk 5] Length = 179 Score = 39.3 bits (90), Expect = 0.53, Method: Compositional matrix adjust. Identities = 52/192 (27%), Positives = 88/192 (45%), Gaps = 33/192 (17%) Query: 71 TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130 +EPR +T LL+D L R + V ++++G G G V + + + VGVDI+ Sbjct: 2 VYEPREDTFLLLDC-----LKRGFRGGV--LVEVGCGKGVVSVYASNRADYV--VGVDIA 52 Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRD 189 +A+ +++ A + D +Q+D + + DV+ SNPPY L + R+ Sbjct: 53 WEAVRLSRELARASKEC-LVDFVQADMLNPFRDSSADVVASNPPY--------LPCDYRE 103 Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDG----LCSVEIGYNQKVDVVR-------I 238 DP + GG DG+ +A R L + G + S + + +DV+R + Sbjct: 104 -DPLVC--GGEDGVEFSARLAREAFRVLRRSGELFLVASSISNFERLLDVLRGLYASVEV 160 Query: 239 FESRKLFLVNAF 250 E R+LF F Sbjct: 161 AEERRLFFEKLF 172 >gi|78499686|gb|ABB45840.1| hypothetical protein [Eutrema halophilum] Length = 310 Score = 39.3 bits (90), Expect = 0.53, Method: Compositional matrix adjust. Identities = 21/74 (28%), Positives = 40/74 (54%), Gaps = 2/74 (2%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +L++G GTG + + LL+ + V V+I + +EI +G+ ++ +Q D + Sbjct: 77 VLEIGPGTGNLTMKLLEAAQNV--VAVEIDKRMVEILGKRVADHGLEDKLTIIQKDVLKT 134 Query: 161 VEGLFDVIVSNPPY 174 FD++V+N PY Sbjct: 135 DFPQFDLVVANIPY 148 >gi|15231240|ref|NP_187952.1| methyltransferase/ nucleic acid binding [Arabidopsis thaliana] gi|18377858|gb|AAL67115.1| AT3g13440/MRP15_7 [Arabidopsis thaliana] gi|20453313|gb|AAM19895.1| AT3g13440/MRP15_7 [Arabidopsis thaliana] gi|332641833|gb|AEE75354.1| S-adenosyl-L-methionine-dependent methyltransferase-like protein [Arabidopsis thaliana] Length = 278 Score = 39.3 bits (90), Expect = 0.53, Method: Compositional matrix adjust. Identities = 36/124 (29%), Positives = 61/124 (49%), Gaps = 12/124 (9%) Query: 63 VRLTLSS-DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL----K 117 +RL S + +EP ++ LVD+ LA IE + +++G G+G V +L+ Sbjct: 40 IRLVSSHREVYEPCDDSFALVDALLADRTNLIEHNPKI-CMEIGCGSGYVITSLILLLQN 98 Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPP 173 E P + +D + A + K +GV+ D + +D + +E G DVIV NPP Sbjct: 99 EVPGVHYLAIDTNPIATRVTKETLEAHGVNA--DVICADLATGLEKRLAGSVDVIVVNPP 156 Query: 174 YIES 177 Y+ + Sbjct: 157 YVPT 160 >gi|325284032|ref|YP_004256573.1| Ribosomal protein L11 methyltransferase [Deinococcus proteolyticus MRP] gi|324315841|gb|ADY26956.1| Ribosomal protein L11 methyltransferase [Deinococcus proteolyticus MRP] Length = 275 Score = 39.3 bits (90), Expect = 0.53, Method: Compositional matrix adjust. Identities = 28/83 (33%), Positives = 44/83 (53%), Gaps = 13/83 (15%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS---ERFD--TLQS 155 +LD+GTG+G + +A K GVDI + + +A+ NA NG+S +FD TL Sbjct: 129 VLDVGTGSGVLAMAAAKLGADLA-YGVDIDPQTIPVARENAAQNGLSAPQAQFDEGTLAQ 187 Query: 156 DWFSSVEGL-------FDVIVSN 171 F++ G +DV+V+N Sbjct: 188 GSFTAPAGHAALAEQGYDVLVAN 210 >gi|260779560|ref|ZP_05888450.1| ribosomal protein L11 methyltransferase [Vibrio coralliilyticus ATCC BAA-450] gi|260604369|gb|EEX30673.1| ribosomal protein L11 methyltransferase [Vibrio coralliilyticus ATCC BAA-450] Length = 295 Score = 39.3 bits (90), Expect = 0.53, Method: Compositional matrix adjust. Identities = 34/112 (30%), Positives = 56/112 (50%), Gaps = 17/112 (15%) Query: 74 PRPET-ELLVDSALAFS----------LPRIEKRDVVR--ILDLGTGTGAVCLALLKESP 120 P P+ +++D LAF L +E D+ ++D G G+G + +A +K Sbjct: 123 PEPDAVNVMLDPGLAFGTGTHPTTALCLEWLEGLDLSSKTVIDFGCGSGILAIAAIKLG- 181 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF-DVIVSN 171 K +G+DI +AL +K NA NGV+++ + EGL DV+V+N Sbjct: 182 AEKVIGIDIDPQALIASKDNAERNGVADKLEVFLPQ--DQPEGLIADVVVAN 231 >gi|126700177|ref|YP_001089074.1| hypothetical protein CD2559 [Clostridium difficile 630] gi|255101721|ref|ZP_05330698.1| hypothetical protein CdifQCD-6_12989 [Clostridium difficile QCD-63q42] gi|255307590|ref|ZP_05351761.1| hypothetical protein CdifA_13437 [Clostridium difficile ATCC 43255] gi|115251614|emb|CAJ69447.1| conserved hypothetical protein [Clostridium difficile] Length = 184 Score = 39.3 bits (90), Expect = 0.53, Method: Compositional matrix adjust. Identities = 28/93 (30%), Positives = 50/93 (53%), Gaps = 13/93 (13%) Query: 100 RILDLGTGTGAV---CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 +LDL GTG++ CL+ +S F VDIS ++++I KSN V L D Sbjct: 44 EVLDLFAGTGSLGIECLSRGAKSCTF----VDISKESIDIVKSNIKKARVESESIILNLD 99 Query: 157 WFSSVEGL------FDVIVSNPPYIESVIVDCL 183 + ++++ L FD+I +PPY +++ ++ + Sbjct: 100 FKTAIDKLKLQNSKFDIIFMDPPYYKNMFIEAI 132 >gi|329113330|ref|ZP_08242111.1| tRNA (adenine-N(6)-)-methyltransferase [Acetobacter pomorum DM001] gi|326697155|gb|EGE48815.1| tRNA (adenine-N(6)-)-methyltransferase [Acetobacter pomorum DM001] Length = 251 Score = 39.3 bits (90), Expect = 0.53, Method: Compositional matrix adjust. Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 10/90 (11%) Query: 93 IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152 + R +L++G G GA L LL +P +G GV+ +A+ N V N ++ Sbjct: 39 VPARKGQHVLEIGCGAGAGLLCLLHRAPTLQGTGVEKESDTATLAQQNMVAN--HQQNIR 96 Query: 153 LQSDWFSSV--------EGLFDVIVSNPPY 174 + + F V E FD ++NPP+ Sbjct: 97 ILNATFPDVFLEDNPLPEQYFDHCMANPPW 126 >gi|319956549|ref|YP_004167812.1| methyltransferase small [Nitratifractor salsuginis DSM 16511] gi|319418953|gb|ADV46063.1| methyltransferase small [Nitratifractor salsuginis DSM 16511] Length = 232 Score = 39.3 bits (90), Expect = 0.53, Method: Compositional matrix adjust. Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 4/83 (4%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF- 158 ++LD+G G G + L L ++ P + + K LE A N NG+ D+ Sbjct: 31 KLLDVGCGVGIISLLLGRDYPV-EVYLAEKQPKMLEYALHNFTLNGIEAH--AYPGDFLE 87 Query: 159 SSVEGLFDVIVSNPPYIESVIVD 181 + +E FD+IVSNPP+ + + Sbjct: 88 AQIEERFDLIVSNPPFYDPRVTQ 110 >gi|293399720|ref|ZP_06643866.1| methyltransferase domain protein [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291306120|gb|EFE47363.1| methyltransferase domain protein [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 198 Score = 39.3 bits (90), Expect = 0.53, Method: Compositional matrix adjust. Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 5/95 (5%) Query: 82 VDSALAFSLPRIEKRDVVR--ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKS 139 VD L + KRD ++ ILD+G G G + + + P VD++ +A+ +AK Sbjct: 41 VDFGTQVFLNTLLKRDELQDTILDVGCGYGPIGIIIKHTYPDKHVEMVDVNPRAIALAKE 100 Query: 140 NAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPP 173 NA N V + +SD ++ V G + I++NPP Sbjct: 101 NAKANHVDVQIH--ESDVYAQVTGNTYTDILTNPP 133 >gi|289192748|ref|YP_003458689.1| methyltransferase small [Methanocaldococcus sp. FS406-22] gi|288939198|gb|ADC69953.1| methyltransferase small [Methanocaldococcus sp. FS406-22] Length = 197 Score = 39.3 bits (90), Expect = 0.53, Method: Compositional matrix adjust. Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 8/77 (10%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGV-DISCKALEIAKSNAVTNGVSERFD--TLQSDW 157 ILDLG G G + +AL E K V + DI+ +A+++AK N N + E +D + SD Sbjct: 59 ILDLGCGYGVIGIALADE---VKSVTMADINRRAIKLAKENIKLNNL-EGYDIRVIHSDL 114 Query: 158 FSSV-EGLFDVIVSNPP 173 + +V + +D I++NPP Sbjct: 115 YENVRDREYDKIITNPP 131 >gi|157151004|ref|YP_001449953.1| methyltransferase, putative [Streptococcus gordonii str. Challis substr. CH1] gi|157075798|gb|ABV10481.1| methyltransferase, putative [Streptococcus gordonii str. Challis substr. CH1] Length = 179 Score = 39.3 bits (90), Expect = 0.53, Method: Compositional matrix adjust. Identities = 35/131 (26%), Positives = 57/131 (43%), Gaps = 16/131 (12%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD--- 156 R+LDL G+G++ + + V V+ +A I N S RFD L+ + Sbjct: 44 RVLDLYAGSGSLAIEAISRG-METAVLVEKDRRAQAIISENIQMTKESTRFDLLKMESAR 102 Query: 157 WFSSVEGLFDVIVSNPPYI-ESVIVDCLGLEVRDF-----------DPRISLDGGIDGLS 204 ++ G FD+++ +PPY E V+ D LE R D + L I GL Sbjct: 103 ALDTLTGTFDLVLLDPPYAKEQVVADLEKLEERQLLSQDVLVVCETDKDVELPEEIAGLG 162 Query: 205 HYRTIADGVSR 215 ++ G+S+ Sbjct: 163 IWKQKIYGISK 173 >gi|52841423|ref|YP_095222.1| hypothetical protein lpg1190 [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|148358776|ref|YP_001249983.1| hypothetical protein LPC_0657 [Legionella pneumophila str. Corby] gi|52628534|gb|AAU27275.1| SAM-dependent methyltransferase [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|148280549|gb|ABQ54637.1| hypothetical protein LPC_0657 [Legionella pneumophila str. Corby] Length = 390 Score = 39.3 bits (90), Expect = 0.53, Method: Compositional matrix adjust. Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 2/75 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWF 158 R+LDL T TG L K VD S +A+E AK+NAV N ++ F + + Sbjct: 223 RVLDLYTFTGGFALHAAKAGALHV-TAVDSSVQAIEQAKNNAVLNHLNTIEFIKADAREY 281 Query: 159 SSVEGLFDVIVSNPP 173 + G +DV++ +PP Sbjct: 282 LKMAGEYDVVILDPP 296 >gi|332292761|ref|YP_004431370.1| RNA methyltransferase, TrmA family [Krokinobacter diaphorus 4H-3-7-5] gi|332170847|gb|AEE20102.1| RNA methyltransferase, TrmA family [Krokinobacter diaphorus 4H-3-7-5] Length = 470 Score = 39.3 bits (90), Expect = 0.54, Method: Compositional matrix adjust. Identities = 27/80 (33%), Positives = 44/80 (55%), Gaps = 10/80 (12%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV--SERF-----DTL 153 + DL TGTG + + K++ K +GV+ A+E AK NA NG+ +E F Sbjct: 327 VYDLYTGTGTIAQFVAKKAR--KVIGVEAVPDAIEAAKENAKLNGIENTEFFVGDMKKVF 384 Query: 154 QSDWFSSVEGLFDVIVSNPP 173 +D F + G+ D+I+++PP Sbjct: 385 NTD-FINTHGVPDIIITDPP 403 >gi|322689524|ref|YP_004209258.1| hypothetical protein BLIF_1341 [Bifidobacterium longum subsp. infantis 157F] gi|322691481|ref|YP_004221051.1| hypothetical protein BLLJ_1292 [Bifidobacterium longum subsp. longum JCM 1217] gi|320456337|dbj|BAJ66959.1| conserved hypothetical protein [Bifidobacterium longum subsp. longum JCM 1217] gi|320460860|dbj|BAJ71480.1| conserved hypothetical protein [Bifidobacterium longum subsp. infantis 157F] Length = 200 Score = 39.3 bits (90), Expect = 0.54, Method: Compositional matrix adjust. Identities = 30/87 (34%), Positives = 41/87 (47%), Gaps = 16/87 (18%) Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 LDLG G G + L L ESP VD++ +A+++ +NA NG + T Q D S+ Sbjct: 45 LDLGCGWGPIALTLAFESPEANVWAVDVNERAVDLTHANAQANGHT-NIHTAQVDESSTP 103 Query: 162 ---------------EGLFDVIVSNPP 173 + FDVI SNPP Sbjct: 104 LPAENQPAFCETVPSDLTFDVIWSNPP 130 >gi|312875748|ref|ZP_07735743.1| methyltransferase small domain protein [Lactobacillus iners LEAF 2053A-b] gi|311088740|gb|EFQ47189.1| methyltransferase small domain protein [Lactobacillus iners LEAF 2053A-b] Length = 204 Score = 39.3 bits (90), Expect = 0.54, Method: Compositional matrix adjust. Identities = 25/75 (33%), Positives = 43/75 (57%), Gaps = 3/75 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 ILD+GTG G + L K P + +D++ +AL +AK NA N + + + SD + + Sbjct: 65 ILDVGTGYGPLGLFAAKLWPKSRVTMIDVNERALALAKRNAQLNEI-DNVNIFCSDCYRN 123 Query: 161 V--EGLFDVIVSNPP 173 + + F +I++NPP Sbjct: 124 LDDQEQFGLILTNPP 138 >gi|326775438|ref|ZP_08234703.1| Methyltransferase type 12 [Streptomyces cf. griseus XylebKG-1] gi|326655771|gb|EGE40617.1| Methyltransferase type 12 [Streptomyces cf. griseus XylebKG-1] Length = 310 Score = 39.3 bits (90), Expect = 0.54, Method: Compositional matrix adjust. Identities = 26/68 (38%), Positives = 38/68 (55%), Gaps = 2/68 (2%) Query: 89 SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148 LP K V R+LD+G+G G V L + P + V VD + L+ AK A G+S+ Sbjct: 62 GLPTAPK--VRRVLDIGSGPGVVSCLLAEVFPEAEVVAVDATPALLDRAKDRARRLGLSD 119 Query: 149 RFDTLQSD 156 RF TL+++ Sbjct: 120 RFRTLEAE 127 >gi|212637878|ref|YP_002314398.1| methyltransferase [Anoxybacillus flavithermus WK1] gi|212559358|gb|ACJ32413.1| Methyltransferase (UbiE/COQ5 family) [Anoxybacillus flavithermus WK1] Length = 244 Score = 39.3 bits (90), Expect = 0.54, Method: Compositional matrix adjust. Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 5/81 (6%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 ++DL TG G + L L K + K VGV+I K ++AK + N + ++ + + D Sbjct: 47 LVDLCTGNGVIPLLLSKRTKG-KIVGVEIQEKIYDMAKRSVQYNELEKQIEIIHGDIKHM 105 Query: 161 VEGL----FDVIVSNPPYIES 177 L FDV+ NPPY + Sbjct: 106 PAYLGHSKFDVVTCNPPYFPT 126 >gi|19173510|ref|NP_597313.1| similarity to HYPOTHETICAL PROTEINS with N6-adenine methyltransferase signature [Encephalitozoon cuniculi GB-M1] gi|19171099|emb|CAD26489.1| similarity to HYPOTHETICAL PROTEINS with N6-adenine methyltransferase signature [Encephalitozoon cuniculi GB-M1] Length = 199 Score = 39.3 bits (90), Expect = 0.54, Method: Compositional matrix adjust. Identities = 29/93 (31%), Positives = 43/93 (46%), Gaps = 10/93 (10%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 ILDL GTG + A SP + +GVD+ ALEI + N++ ++ D Sbjct: 52 ILDLCCGTGMLSFACSYFSPSYI-LGVDLCPVALEIFRQNSLEFQINADLLRCSIDDLIF 110 Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPR 193 + G FD + NPP+ G ++R D R Sbjct: 111 INGRFDTAIINPPF---------GTKIRHADTR 134 >gi|328697680|ref|XP_003240407.1| PREDICTED: hypothetical protein LOC100163046 isoform 2 [Acyrthosiphon pisum] Length = 508 Score = 39.3 bits (90), Expect = 0.54, Method: Compositional matrix adjust. Identities = 34/122 (27%), Positives = 57/122 (46%), Gaps = 7/122 (5%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 ++D G G+ + K + +DI K +EIA+ NA GV++R + D+F+ Sbjct: 342 LIDPFCGAGSNVIQFAKTCELV--IAIDIDPKKIEIARHNAELYGVADRIQFIIGDYFTL 399 Query: 161 VEGLF-DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG-LSHYRTIADGVSRHLN 218 L DV+ +PP+ ++D LE + GGI +S R I ++ HL Sbjct: 400 APTLKGDVVFLSPPWGGPDLMD---LEEYKLSYIMPEKGGIKQMMSLTRQITSNIALHLP 456 Query: 219 KD 220 K+ Sbjct: 457 KN 458 >gi|307287470|ref|ZP_07567522.1| N-6 DNA Methylase [Enterococcus faecalis TX0109] gi|306501516|gb|EFM70815.1| N-6 DNA Methylase [Enterococcus faecalis TX0109] Length = 343 Score = 39.3 bits (90), Expect = 0.54, Method: Compositional matrix adjust. Identities = 29/107 (27%), Positives = 48/107 (44%), Gaps = 9/107 (8%) Query: 94 EKRDVVRILDLGTGTGAVCLAL---LKESPFFKGVGVDISCKALEIAKSNAVTNGV-SER 149 ++R + D G+G++ L + L K G +++ +AK N + +GV +E Sbjct: 27 KERRFFSVFDPTMGSGSLMLNVRNYLTHPDNVKYHGQELNTTTYNLAKMNLILHGVDAEE 86 Query: 150 F-----DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFD 191 DTL DW + FD +V NPPY + D L+ F+ Sbjct: 87 MNLRNGDTLNKDWPTDEPYTFDAVVMNPPYSANWSADTTFLDDSRFN 133 >gi|256820983|ref|YP_003142262.1| RNA methyltransferase, TrmA family [Capnocytophaga ochracea DSM 7271] gi|256582566|gb|ACU93701.1| RNA methyltransferase, TrmA family [Capnocytophaga ochracea DSM 7271] Length = 471 Score = 39.3 bits (90), Expect = 0.54, Method: Compositional matrix adjust. Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 8/79 (10%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE------RFDTLQ 154 + DL TGTG + + K++ K +GV+ +A+ AK NA NG+ + Sbjct: 324 VYDLYTGTGTIAQFVAKKAK--KVIGVEAVPEAIADAKDNAFANGIENVTFYVGDMKNIF 381 Query: 155 SDWFSSVEGLFDVIVSNPP 173 +D F G DVI+++PP Sbjct: 382 NDTFIEENGTPDVIITDPP 400 >gi|192292397|ref|YP_001993002.1| ribosomal L11 methyltransferase [Rhodopseudomonas palustris TIE-1] gi|192286146|gb|ACF02527.1| ribosomal L11 methyltransferase [Rhodopseudomonas palustris TIE-1] Length = 296 Score = 39.3 bits (90), Expect = 0.54, Method: Compositional matrix adjust. Identities = 24/79 (30%), Positives = 44/79 (55%), Gaps = 11/79 (13%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+LDLGTGTG + +A K + + DI +++ +A+ NA NGV + +Q++W + Sbjct: 157 RVLDLGTGTGVLAIAAAK-ALRHTVLATDIDKQSVAVARENARLNGVG---NLVQAEWAT 212 Query: 160 -------SVEGLFDVIVSN 171 + FD++++N Sbjct: 213 GFASPVFAAHAPFDLVLAN 231 >gi|699324|gb|AAA63085.1| u471f [Mycobacterium leprae] Length = 125 Score = 39.3 bits (90), Expect = 0.54, Method: Compositional matrix adjust. Identities = 32/101 (31%), Positives = 46/101 (45%), Gaps = 6/101 (5%) Query: 164 LFDVIVS---NPPYI--ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 L D +S NPPY+ + V+ L EV +DPR ++ GG DG++ I R L Sbjct: 13 LMDASISLWPNPPYVPDDPVVQSILEPEVTQYDPRHAVFGGPDGMALTADIVGLAGRWLR 72 Query: 219 KDGLCSVEIGYNQKVDVVRIFESRKLF-LVNAFKDYGGNDR 258 GL +VE + V + + LF V +D G R Sbjct: 73 PGGLFAVEHDDSTSVPTLDLVYRTDLFDDVLTHRDLAGRPR 113 >gi|39936576|ref|NP_948852.1| ribosomal L11 methyltransferase [Rhodopseudomonas palustris CGA009] gi|39650432|emb|CAE28955.1| conserved hypothetical protein [Rhodopseudomonas palustris CGA009] Length = 311 Score = 39.3 bits (90), Expect = 0.54, Method: Compositional matrix adjust. Identities = 24/79 (30%), Positives = 44/79 (55%), Gaps = 11/79 (13%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+LDLGTGTG + +A K + + DI +++ +A+ NA NGV + +Q++W + Sbjct: 172 RVLDLGTGTGVLAIAAAK-ALRHTVLATDIDKQSVAVARENARLNGVG---NLVQAEWAT 227 Query: 160 -------SVEGLFDVIVSN 171 + FD++++N Sbjct: 228 GFASPVFAAHAPFDLVLAN 246 >gi|34763572|ref|ZP_00144507.1| METHYLTRANSFERASE [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|237742322|ref|ZP_04572803.1| methyltransferase [Fusobacterium sp. 4_1_13] gi|256845601|ref|ZP_05551059.1| RsmD family RNA methyltransferase [Fusobacterium sp. 3_1_36A2] gi|294785110|ref|ZP_06750398.1| RNA methyltransferase, RsmD family [Fusobacterium sp. 3_1_27] gi|27886761|gb|EAA23899.1| METHYLTRANSFERASE [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|229429970|gb|EEO40182.1| methyltransferase [Fusobacterium sp. 4_1_13] gi|256719160|gb|EEU32715.1| RsmD family RNA methyltransferase [Fusobacterium sp. 3_1_36A2] gi|294486824|gb|EFG34186.1| RNA methyltransferase, RsmD family [Fusobacterium sp. 3_1_27] Length = 182 Score = 39.3 bits (90), Expect = 0.54, Method: Compositional matrix adjust. Identities = 33/126 (26%), Positives = 58/126 (46%), Gaps = 10/126 (7%) Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 R+ + F+ RP E + +S + P IE LDL +G+G++ L + + Sbjct: 11 RIIKTRKGFDTRPTLESVKESLFSIIAPYIEGS---VFLDLFSGSGSISLEAISRGAK-R 66 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPPYIES 177 V ++ +AL+ N G S+R ++D ++E L FD+I +PPY ++ Sbjct: 67 AVMIEKDGEALKYIIENIDNLGFSDRCRAYKNDVIRAIEILGRKNEKFDIIFMDPPYQDN 126 Query: 178 VIVDCL 183 V L Sbjct: 127 VTKKVL 132 >gi|300727618|ref|ZP_07061007.1| ribosomal protein L11 methyltransferase [Prevotella bryantii B14] gi|299775138|gb|EFI71741.1| ribosomal protein L11 methyltransferase [Prevotella bryantii B14] Length = 273 Score = 39.3 bits (90), Expect = 0.55, Method: Compositional matrix adjust. Identities = 35/120 (29%), Positives = 56/120 (46%), Gaps = 19/120 (15%) Query: 69 SDTFEP---RPETELLVDSALAFSLPRIEKRDVV------------RILDLGTGTGAVCL 113 ++TF P + E+ +D+ AF + ++ RILD G GTG + L Sbjct: 93 AETFHPEQSKDHIEIGIDAVQAFGTGTHQTTRMIVSALLHMGVHDKRILDCGCGTGILGL 152 Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW--FSSVEGLFDVIVSN 171 A K VG DI ++E AK NA NGV + + D + + G+FD++++N Sbjct: 153 AASKLGA-KDIVGYDIDEWSVENAKHNAEINGV-KNMEIYHGDANVLNHISGIFDIVLAN 210 >gi|292655251|ref|YP_003535148.1| protein-L-isoaspartate O-methyltransferase [Haloferax volcanii DS2] gi|291370660|gb|ADE02887.1| protein-L-isoaspartate O-methyltransferase [Haloferax volcanii DS2] Length = 208 Score = 39.3 bits (90), Expect = 0.55, Method: Compositional matrix adjust. Identities = 22/47 (46%), Positives = 30/47 (63%), Gaps = 2/47 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147 +LDLGTGTGA+ LAL ++ + VG DIS LE A++ A G+ Sbjct: 47 VLDLGTGTGAIALALAPDAK--RVVGRDISEGMLEQARTKAAEVGIE 91 >gi|218531357|ref|YP_002422173.1| methyltransferase small [Methylobacterium chloromethanicum CM4] gi|218523660|gb|ACK84245.1| methyltransferase small [Methylobacterium chloromethanicum CM4] Length = 250 Score = 39.3 bits (90), Expect = 0.55, Method: Compositional matrix adjust. Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 9/85 (10%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 + DLG TGAV LA+ + + V V+ + +A+ NA NG+ R +++D + Sbjct: 44 LYDLGAATGAVGLAVARLCEVGRVVLVERDPDLVALARENAAANGLDARVAVIEADILAP 103 Query: 161 -----VEGL----FDVIVSNPPYIE 176 G+ D++++NPP+ E Sbjct: 104 GAQRRAAGMEPDSADIVLTNPPFFE 128 >gi|152967304|ref|YP_001363088.1| methylase [Kineococcus radiotolerans SRS30216] gi|151361821|gb|ABS04824.1| putative methylase [Kineococcus radiotolerans SRS30216] Length = 236 Score = 39.3 bits (90), Expect = 0.55, Method: Compositional matrix adjust. Identities = 32/96 (33%), Positives = 48/96 (50%), Gaps = 8/96 (8%) Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGL 185 VD+S +A+ A++NA V R + D F V + F ++++NPPY+ + D L Sbjct: 58 VDLSHRAVLTARANARLARV--RVQVRRGDLFEPVRDRRFGLVLANPPYVPAA-TDRLP- 113 Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221 P S DGGIDG + I +GV+ L G Sbjct: 114 ---RHRPGRSWDGGIDGRAVLDRICEGVAGVLTPGG 146 >gi|120609940|ref|YP_969618.1| methyltransferase small [Acidovorax citrulli AAC00-1] gi|120588404|gb|ABM31844.1| methyltransferase small [Acidovorax citrulli AAC00-1] Length = 388 Score = 39.3 bits (90), Expect = 0.55, Method: Compositional matrix adjust. Identities = 33/104 (31%), Positives = 49/104 (47%), Gaps = 4/104 (3%) Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162 D+GTGTG V A+L + V D +AL A+ N V D LQ+D F Sbjct: 215 DIGTGTG-VLAAVLARRGVRRVVATDQDPRALACARENLQRLRVLPAVDILQADLFPP-- 271 Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206 G ++V NPP++ + + V D D + L G + GL+ + Sbjct: 272 GRAPLVVCNPPWVPARAAAPVERAVYDEDSGM-LRGFLGGLAEH 314 >gi|42518924|ref|NP_964854.1| hypothetical protein LJ0998 [Lactobacillus johnsonii NCC 533] gi|41583210|gb|AAS08820.1| hypothetical protein LJ_0998 [Lactobacillus johnsonii NCC 533] Length = 182 Score = 39.3 bits (90), Expect = 0.55, Method: Compositional matrix adjust. Identities = 27/90 (30%), Positives = 46/90 (51%), Gaps = 7/90 (7%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LDL G+GA+ + + + + V VDIS +A ++ K N ERF L+ Sbjct: 44 QVLDLYAGSGALGIEAVSRG-YDEAVLVDISGQACQVIKKNVELTKEEERFRVLKCSDNR 102 Query: 160 SVEGL------FDVIVSNPPYIESVIVDCL 183 +++ L FD+I +PPY + IV + Sbjct: 103 AIKILQDEGKKFDLIFLDPPYAKQKIVKIM 132 >gi|326798466|ref|YP_004316285.1| methyltransferase type 11 [Sphingobacterium sp. 21] gi|326549230|gb|ADZ77615.1| Methyltransferase type 11 [Sphingobacterium sp. 21] Length = 196 Score = 39.3 bits (90), Expect = 0.55, Method: Compositional matrix adjust. Identities = 26/71 (36%), Positives = 36/71 (50%), Gaps = 3/71 (4%) Query: 88 FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147 + ++ K D+ I DLG G G + + KE GVGVDI ++ A NA GVS Sbjct: 59 LQIAQVNKNDL--IYDLGCGDGRIVITAAKEY-GATGVGVDIDPNRIKEANRNAQKEGVS 115 Query: 148 ERFDTLQSDWF 158 ++ LQ D F Sbjct: 116 DKVQFLQQDLF 126 >gi|325285147|ref|YP_004260937.1| RNA methyltransferase, TrmA family [Cellulophaga lytica DSM 7489] gi|324320601|gb|ADY28066.1| RNA methyltransferase, TrmA family [Cellulophaga lytica DSM 7489] Length = 470 Score = 39.3 bits (90), Expect = 0.55, Method: Compositional matrix adjust. Identities = 32/114 (28%), Positives = 55/114 (48%), Gaps = 15/114 (13%) Query: 72 FEPRPETELLVDSALAFSLPRIEKRDVVR------ILDLGTGTGAVCLALLKESPFFKGV 125 F+ P++ +S A+ L +I RD + DL TGTG + + K++ K V Sbjct: 292 FKINPKSFYQTNSEQAYELYKI-TRDFAELSGDELVYDLYTGTGTIAQFVSKKAK--KVV 348 Query: 126 GVDISCKALEIAKSNAVTNGVSER------FDTLQSDWFSSVEGLFDVIVSNPP 173 G++ +A+E AK+NA N + + + F + G DVI+++PP Sbjct: 349 GIEAVPEAIEDAKANAKHNKIDNTVFYAGDMKKIFNPEFIAQNGTPDVIITDPP 402 >gi|293552874|ref|ZP_06673532.1| RNA methyltransferase, RsmD family [Enterococcus faecium E1039] gi|291603008|gb|EFF33202.1| RNA methyltransferase, RsmD family [Enterococcus faecium E1039] Length = 186 Score = 39.3 bits (90), Expect = 0.55, Method: Compositional matrix adjust. Identities = 32/113 (28%), Positives = 52/113 (46%), Gaps = 10/113 (8%) Query: 75 RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134 RP T+ + +S P D +LDL G+G + + + V VD + +AL Sbjct: 22 RPTTDKVKESIFNMIGPYF---DGETVLDLFAGSGGLAIEAVSRG-CSHAVCVDKNYQAL 77 Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPPYIESVIVD 181 +I K N E+F T++ D ++E L FD + +PPY + I+D Sbjct: 78 KIIKENIEITKEPEKFTTIKLDADKAIERLAEEEQQFDYLFLDPPYAKQKIID 130 >gi|163839486|ref|YP_001623891.1| 16S rRNA m2G1207 methyltransferase [Renibacterium salmoninarum ATCC 33209] gi|162952962|gb|ABY22477.1| 16S rRNA m2G1207 methyltransferase [Renibacterium salmoninarum ATCC 33209] Length = 205 Score = 39.3 bits (90), Expect = 0.55, Method: Compositional matrix adjust. Identities = 36/142 (25%), Positives = 62/142 (43%), Gaps = 5/142 (3%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LD+G G G + L L +SP + VD++ ++L + NA G+ + + S Sbjct: 66 LLDIGCGWGPIALTLALKSPQARIHAVDVNERSLALTAENAAALGLGNVQVSQPDELDPS 125 Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220 + F I SNPP V D L +R + PR++ G + +D + R + ++ Sbjct: 126 IR--FQTIWSNPPI--RVGKDVLHHILRTWLPRLTPSGTAYLVVQKNLGSDSLQRWITEE 181 Query: 221 GLCSVEIGYNQKVDVVRIFESR 242 +E+ RI E R Sbjct: 182 -FADLEVRRFSTAKSFRILEVR 202 >gi|161620078|ref|YP_001593965.1| methyltransferase small [Brucella canis ATCC 23365] gi|260567363|ref|ZP_05837833.1| methyltransferase [Brucella suis bv. 4 str. 40] gi|161336889|gb|ABX63194.1| methyltransferase small [Brucella canis ATCC 23365] gi|260156881|gb|EEW91961.1| methyltransferase [Brucella suis bv. 4 str. 40] Length = 340 Score = 39.3 bits (90), Expect = 0.55, Method: Compositional matrix adjust. Identities = 30/114 (26%), Positives = 50/114 (43%), Gaps = 8/114 (7%) Query: 73 EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV-DISC 131 EP + +D A +EK + DLG G G + LK + K + + + Sbjct: 172 EPGMFSHGAIDKGSALLARHMEKIVFGNVADLGAGWGYLAAQCLKYADRIKNIDLYEADY 231 Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWF----SSVEGLFDVIVSNPPYIESVIVD 181 +ALE A+ N G S + +WF + G++D ++ NPP+ E + D Sbjct: 232 EALEAARGNLERLGAS---IPISFNWFDVTSEKIAGIYDTVIMNPPFHEGRVTD 282 >gi|149913260|ref|ZP_01901794.1| methyltransferase small [Roseobacter sp. AzwK-3b] gi|149813666|gb|EDM73492.1| methyltransferase small [Roseobacter sp. AzwK-3b] Length = 256 Score = 39.3 bits (90), Expect = 0.55, Method: Compositional matrix adjust. Identities = 36/123 (29%), Positives = 52/123 (42%), Gaps = 14/123 (11%) Query: 59 DFYNVRLTLSSDTFEPRPETELLVDSAL-AFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117 DF RL +S +PR VD L A S+P R +LDLG G G L L Sbjct: 14 DFLGGRLRIS----QPREGYRAGVDPVLLAASVP---ARAGDTVLDLGCGVGVAGLCLAS 66 Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPP 173 G+++ C +A+ NA NG++ + + D E F ++ NPP Sbjct: 67 RVDGLALAGLELQCAYAALARQNASVNGIT--MEVVTGDVSDMPEQFRQRQFTHVLVNPP 124 Query: 174 YIE 176 Y + Sbjct: 125 YFD 127 >gi|315224184|ref|ZP_07866024.1| 23S rRNA (uracil-5-)-methyltransferase [Capnocytophaga ochracea F0287] gi|314945917|gb|EFS97926.1| 23S rRNA (uracil-5-)-methyltransferase [Capnocytophaga ochracea F0287] Length = 471 Score = 39.3 bits (90), Expect = 0.56, Method: Compositional matrix adjust. Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 8/79 (10%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE------RFDTLQ 154 + DL TGTG + + K++ K +GV+ +A+ AK NA NG+ + Sbjct: 324 VYDLYTGTGTIAQFVAKKAK--KVIGVEAVPEAITDAKDNAFANGIENVTFYVGDMKNIF 381 Query: 155 SDWFSSVEGLFDVIVSNPP 173 +D F G DVI+++PP Sbjct: 382 NDTFIEENGTPDVIITDPP 400 >gi|293571943|ref|ZP_06682957.1| RNA methyltransferase, RsmD family [Enterococcus faecium E980] gi|291607961|gb|EFF37269.1| RNA methyltransferase, RsmD family [Enterococcus faecium E980] Length = 186 Score = 39.3 bits (90), Expect = 0.56, Method: Compositional matrix adjust. Identities = 32/113 (28%), Positives = 52/113 (46%), Gaps = 10/113 (8%) Query: 75 RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134 RP T+ + +S P D +LDL G+G + + + V VD + +AL Sbjct: 22 RPTTDKVKESIFNMIGPYF---DGETVLDLFAGSGGLAIEAVSRG-CSHAVCVDKNYQAL 77 Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPPYIESVIVD 181 +I K N E+F T++ D ++E L FD + +PPY + I+D Sbjct: 78 KIIKENIEITKEPEKFTTIKLDADKAIERLAAEKQQFDYLFLDPPYAKQKIID 130 >gi|255066137|ref|ZP_05317992.1| ribosomal protein L11 methyltransferase [Neisseria sicca ATCC 29256] gi|255049682|gb|EET45146.1| ribosomal protein L11 methyltransferase [Neisseria sicca ATCC 29256] Length = 295 Score = 39.3 bits (90), Expect = 0.56, Method: Compositional matrix adjust. Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 11/74 (14%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDW 157 +LD G G+G + +A LK VGVDI +A+ +K NA N V +F D L Sbjct: 167 VLDYGCGSGILTIAALKLGAG-SAVGVDIDEQAIRASKDNAAQNNVDAQFYLPDGLP--- 222 Query: 158 FSSVEGLFDVIVSN 171 +G FD++V+N Sbjct: 223 ----QGQFDIVVAN 232 >gi|242240478|ref|YP_002988659.1| MCP methyltransferase, CheR-type [Dickeya dadantii Ech703] gi|242132535|gb|ACS86837.1| MCP methyltransferase, CheR-type [Dickeya dadantii Ech703] Length = 4483 Score = 39.3 bits (90), Expect = 0.56, Method: Composition-based stats. Identities = 34/107 (31%), Positives = 51/107 (47%), Gaps = 7/107 (6%) Query: 68 SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 SS T + P E+ L ++ RI + RIL++G G+G + LL +S ++ +G Sbjct: 1028 SSFTGQALPLAEM--QQWLENTVARISRYPSRRILEIGCGSGLILQHLLADSDYY--LGT 1083 Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQS--DWFSSVE-GLFDVIVSN 171 DIS L K A G S R QS D + + G FD ++ N Sbjct: 1084 DISANTLAKLKKWAAQQGDSHRLVLQQSPADALADLPLGQFDTVILN 1130 >gi|330997886|ref|ZP_08321720.1| methyltransferase domain protein [Paraprevotella xylaniphila YIT 11841] gi|329569490|gb|EGG51260.1| methyltransferase domain protein [Paraprevotella xylaniphila YIT 11841] Length = 236 Score = 39.3 bits (90), Expect = 0.56, Method: Compositional matrix adjust. Identities = 27/95 (28%), Positives = 49/95 (51%), Gaps = 4/95 (4%) Query: 97 DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 D ILD+GTG+G + + L ++ + +G+DI +A+ A N S+R + Sbjct: 38 DSKYILDIGTGSGLIAIMLAQKCNAYI-IGIDIDEEAVNQATDNGKKTPWSQRLHFEVEN 96 Query: 157 WFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDF 190 + + + FD+I NPP+ + + C G E R++ Sbjct: 97 ALTYIPQKKFDLITCNPPFFTNSL-QCPG-EKRNY 129 >gi|284165470|ref|YP_003403749.1| methyltransferase type 11 [Haloterrigena turkmenica DSM 5511] gi|284015125|gb|ADB61076.1| Methyltransferase type 11 [Haloterrigena turkmenica DSM 5511] Length = 266 Score = 39.3 bits (90), Expect = 0.56, Method: Compositional matrix adjust. Identities = 30/101 (29%), Positives = 50/101 (49%), Gaps = 7/101 (6%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWF 158 R+LD+G GTG L + VG+D++ LE+A+ NA G + + T ++ Sbjct: 46 RVLDVGCGTGNAALTARRSGADV--VGLDLAHDMLELARENAALAGYDDIGWLTGDAEAL 103 Query: 159 SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199 +G FDV++SN ++ + G E+R R + GG Sbjct: 104 PVSDGAFDVVLSNFGHVFAPDSTAAGAELR----RATKSGG 140 >gi|268608561|ref|ZP_06142288.1| methyltransferase small [Ruminococcus flavefaciens FD-1] Length = 240 Score = 39.3 bits (90), Expect = 0.56, Method: Compositional matrix adjust. Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 3/78 (3%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKA---LEIAKSNAVTNGVSERFDTLQSD 156 + DLGTG G + L + K+ P VDI A L++ + T G+ L+ Sbjct: 40 KACDLGTGCGIIPLIMQKKLPPQITYAVDIQQGAIDQLKMGMERSETEGIVPICADLKEL 99 Query: 157 WFSSVEGLFDVIVSNPPY 174 W + G D++ NPPY Sbjct: 100 WEGAPLGQLDLVTCNPPY 117 >gi|220935907|ref|YP_002514806.1| putative RNA methylase [Thioalkalivibrio sp. HL-EbGR7] gi|219997217|gb|ACL73819.1| putative RNA methylase [Thioalkalivibrio sp. HL-EbGR7] Length = 426 Score = 39.3 bits (90), Expect = 0.56, Method: Compositional matrix adjust. Identities = 46/168 (27%), Positives = 77/168 (45%), Gaps = 35/168 (20%) Query: 38 LTNAIVRSLKHESIH-RILGWRDFYNVRLTLSSDTF-EPR----PETELLVDSALAFSLP 91 + +AI+ +L H+++H + + WR+ VR D + P PET L + F P Sbjct: 140 MQDAILEAL-HKAVHPKAVLWRNDSPVRELEGLDLYMRPALGEVPETVTLTEHGARFHAP 198 Query: 92 RI---------EKRDV----------VRILDLGTGTGAVCL-ALLKESPFFKGVGVDISC 131 + ++RD +++LDL + GA + A L + VD S Sbjct: 199 LLSGQKTGWFFDQRDNRAWLARVSRGMKVLDLFSYVGAWGVQAALNGAESV--TCVDASG 256 Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPP 173 ALE +NA NGV +R ++ D F ++ L FDV++++PP Sbjct: 257 DALESMAANAAENGVGDRVSGVKGDAFEVLKQLREDQARFDVVITDPP 304 >gi|312793762|ref|YP_004026685.1| 50S ribosomal protein L11 methyltransferase [Caldicellulosiruptor kristjanssonii 177R1B] gi|312180902|gb|ADQ41072.1| ribosomal protein L11 methyltransferase [Caldicellulosiruptor kristjanssonii 177R1B] Length = 304 Score = 39.3 bits (90), Expect = 0.57, Method: Compositional matrix adjust. Identities = 25/73 (34%), Positives = 43/73 (58%), Gaps = 7/73 (9%) Query: 101 ILDLGTGTGAVCLALLKESPFF--KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 +LD+GTG+G + +A K F + + VDI A+++A+ NA NGV + ++D Sbjct: 172 VLDVGTGSGILAIAAKK---FLAKRVLAVDIDEVAVKVAEENARLNGV--EIEIKKNDLV 226 Query: 159 SSVEGLFDVIVSN 171 +E FDV+++N Sbjct: 227 EGIEEKFDVVIAN 239 >gi|298373691|ref|ZP_06983680.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Bacteroidetes oral taxon 274 str. F0058] gi|298274743|gb|EFI16295.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Bacteroidetes oral taxon 274 str. F0058] Length = 477 Score = 39.3 bits (90), Expect = 0.57, Method: Compositional matrix adjust. Identities = 34/104 (32%), Positives = 55/104 (52%), Gaps = 17/104 (16%) Query: 83 DSALAFSLPRIEKRDVVRI------LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136 +S A++L ++ RD RI DL TGTG + + +++ K +G++ +A+E Sbjct: 306 NSRQAYNLYKV-VRDFARIDDRMLVYDLYTGTGTIANFVARKAK--KVIGIEYVPEAIED 362 Query: 137 AKSNAVTNGV--SERF-----DTLQSDWFSSVEGLFDVIVSNPP 173 AK N+ NG+ +E F D L S F G DVI+++PP Sbjct: 363 AKENSAINGIVNTEFFAGDMKDVL-SQSFVDYHGQPDVIITDPP 405 >gi|227551291|ref|ZP_03981340.1| methyltransferase [Enterococcus faecium TX1330] gi|257896087|ref|ZP_05675740.1| conserved hypothetical protein [Enterococcus faecium Com12] gi|293377504|ref|ZP_06623700.1| RNA methyltransferase, RsmD family [Enterococcus faecium PC4.1] gi|227179571|gb|EEI60543.1| methyltransferase [Enterococcus faecium TX1330] gi|257832652|gb|EEV59073.1| conserved hypothetical protein [Enterococcus faecium Com12] gi|292643873|gb|EFF61987.1| RNA methyltransferase, RsmD family [Enterococcus faecium PC4.1] Length = 186 Score = 39.3 bits (90), Expect = 0.57, Method: Compositional matrix adjust. Identities = 32/113 (28%), Positives = 52/113 (46%), Gaps = 10/113 (8%) Query: 75 RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134 RP T+ + +S P D +LDL G+G + + + V VD + +AL Sbjct: 22 RPTTDKVKESIFNMIGPYF---DGETVLDLFAGSGGLAIEAVSRG-CSHAVCVDKNYQAL 77 Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPPYIESVIVD 181 +I K N E+F T++ D ++E L FD + +PPY + I+D Sbjct: 78 KIIKENIEITKEPEKFTTIKLDADKAIERLATEKQQFDYLFLDPPYAKQKIID 130 >gi|302530427|ref|ZP_07282769.1| conserved hypothetical protein [Streptomyces sp. AA4] gi|302439322|gb|EFL11138.1| conserved hypothetical protein [Streptomyces sp. AA4] Length = 245 Score = 39.3 bits (90), Expect = 0.58, Method: Compositional matrix adjust. Identities = 27/66 (40%), Positives = 34/66 (51%), Gaps = 4/66 (6%) Query: 89 SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148 SLPR D V +LDLG G + L P + VGVD S AL A+S A+ GV++ Sbjct: 35 SLPR---EDAV-VLDLGCGGAEWLIRALDAYPELRAVGVDTSEFALSRARSAAIERGVAD 90 Query: 149 RFDTLQ 154 R Q Sbjct: 91 RLTLHQ 96 >gi|225431251|ref|XP_002267827.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 383 Score = 39.3 bits (90), Expect = 0.58, Method: Compositional matrix adjust. Identities = 24/84 (28%), Positives = 46/84 (54%), Gaps = 3/84 (3%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +L++G GTG + L LL+ + + V V++ + +EI + +G+ ++ + D + Sbjct: 78 VLEIGPGTGNLTLRLLQAAQ--RVVAVELDARMVEILRKRVAEHGLEDQLTVICKDALKT 135 Query: 161 VEGLFDVIVSNPPY-IESVIVDCL 183 FD++V+N PY I S +V L Sbjct: 136 DFPQFDLVVANIPYGISSPLVAKL 159 >gi|134100436|ref|YP_001106097.1| glycine sarcosine N-methyltransferase [Saccharopolyspora erythraea NRRL 2338] gi|291005085|ref|ZP_06563058.1| glycine sarcosine N-methyltransferase [Saccharopolyspora erythraea NRRL 2338] gi|133913059|emb|CAM03172.1| glycine sarcosine N-methyltransferase [Saccharopolyspora erythraea NRRL 2338] Length = 568 Score = 39.3 bits (90), Expect = 0.58, Method: Compositional matrix adjust. Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 6/90 (6%) Query: 83 DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142 +S +F + +++ R V +LD+ TGTG + LL+E F+ V D S + L A SN + Sbjct: 67 ESEGSFFIDQLKARGVRSVLDVATGTGFHSVRLLEEG--FEAVSADGSPQMLAKAFSNGL 124 Query: 143 TNGVSERFDTLQSDW---FSSVEGLFDVIV 169 T G + +DW V G +D I+ Sbjct: 125 TYG-GHILRVVHADWRWLNRDVHGEYDAII 153 >gi|19704664|ref|NP_604226.1| methyltransferase [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|19714972|gb|AAL95525.1| Methyltransferase [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] Length = 182 Score = 39.3 bits (90), Expect = 0.58, Method: Compositional matrix adjust. Identities = 33/126 (26%), Positives = 58/126 (46%), Gaps = 10/126 (7%) Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 R+ + F+ RP E + +S + P IE LDL +G+G++ L + + Sbjct: 11 RIIKTRKGFDTRPTLESVKESLFSIIAPYIEGS---IFLDLFSGSGSISLEAISRGAK-R 66 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPPYIES 177 V ++ +AL+ N G S+R ++D ++E L FD+I +PPY ++ Sbjct: 67 AVMIEKDGEALKYIIENIDNLGFSDRCRAYKNDVIRAIEILGRKNEKFDIIFMDPPYQDN 126 Query: 178 VIVDCL 183 V L Sbjct: 127 VTKKVL 132 >gi|39995555|ref|NP_951506.1| ribosomal protein L11 methyltransferase [Geobacter sulfurreducens PCA] gi|60390515|sp|Q74G05|PRMA_GEOSL RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11 Mtase gi|39982318|gb|AAR33779.1| ribosomal protein L11 methyltransferase [Geobacter sulfurreducens PCA] gi|298504561|gb|ADI83284.1| ribosomal protein L11 methyltransferase [Geobacter sulfurreducens KN400] Length = 299 Score = 39.3 bits (90), Expect = 0.58, Method: Compositional matrix adjust. Identities = 34/137 (24%), Positives = 64/137 (46%), Gaps = 27/137 (19%) Query: 56 GWRDFY-------NVRLTLSSDTFEPRPETELL-VDSALAF-------------SLPRIE 94 GWR + ++ + + + F P P +++ +D +AF +L + Sbjct: 104 GWRQHFVPTRIGRHLVIKPTWEPFAPEPGDQVIELDPGMAFGTGTHPTTRLCLEALETLG 163 Query: 95 KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154 + D R+LD+GTG+G + +A ++ + +G DI A+ +A N NGV T Sbjct: 164 RPD--RVLDVGTGSGILAIAAVRLGA-RQVIGTDIDPDAVIVAGENCALNGVEVELVTTP 220 Query: 155 SDWFSSVEGLFDVIVSN 171 + + G FDV+++N Sbjct: 221 ---LALIPGRFDVVLAN 234 >gi|23097497|ref|NP_690963.1| hypothetical protein OB0042 [Oceanobacillus iheyensis HTE831] gi|22775720|dbj|BAC11998.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831] Length = 246 Score = 39.3 bits (90), Expect = 0.58, Method: Compositional matrix adjust. Identities = 32/105 (30%), Positives = 47/105 (44%), Gaps = 12/105 (11%) Query: 84 SALAFSLPRIEKRDVVRI-------LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136 +A AFSL + D I LDL TG G + L LL K GV+I + + Sbjct: 26 TAFAFSLDAVLLADFASIPKKRGAILDLCTGNGVIPL-LLSRKTTAKITGVEIQDRIYSM 84 Query: 137 AKSNAVTNGVSERFDTLQSDW--FSSVEGL--FDVIVSNPPYIES 177 A+ N N + + + D +V G FD++ NPPY ++ Sbjct: 85 AERNVKLNQLQSQLHMIHGDLKEMQAVLGQSSFDMVTCNPPYFKT 129 >gi|67516749|ref|XP_658260.1| hypothetical protein AN0656.2 [Aspergillus nidulans FGSC A4] gi|74681487|sp|Q5BFM4|Y0656_EMENI RecName: Full=Uncharacterized methyltransferase AN0656 gi|40746276|gb|EAA65432.1| hypothetical protein AN0656.2 [Aspergillus nidulans FGSC A4] gi|259489076|tpe|CBF89047.1| TPA: Uncharacterized methyltransferase AN0656 (EC 2.1.1.-) [Source:UniProtKB/Swiss-Prot;Acc:Q5BFM4] [Aspergillus nidulans FGSC A4] Length = 286 Score = 39.3 bits (90), Expect = 0.58, Method: Compositional matrix adjust. Identities = 36/130 (27%), Positives = 57/130 (43%), Gaps = 11/130 (8%) Query: 49 ESIHRILGWRDFYNV--RLTLSSDTFEPR---PETELLVDSALAFSLPRIEKRDVVRILD 103 E+I W + Y+ + DTFE + P LV + V++++D Sbjct: 30 ETIEAYNKWAEVYDTDGNFLQALDTFEMKDLLPRFLCLVQTQTNGKSNMTPGEQVLKLVD 89 Query: 104 LGTGTGAVCLALLKESPF-FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162 LG GTG L L K +P + +G+D S LE+A+ N GV D + V Sbjct: 90 LGCGTGRNTLQLAKSAPKEAQIIGLDASPGMLEVAEGNLKAQGVMGTVDERR-----VVL 144 Query: 163 GLFDVIVSNP 172 G++D++ P Sbjct: 145 GVYDLLSPRP 154 >gi|260464326|ref|ZP_05812518.1| transcriptional regulator, ArsR family [Mesorhizobium opportunistum WSM2075] gi|259029950|gb|EEW31234.1| transcriptional regulator, ArsR family [Mesorhizobium opportunistum WSM2075] Length = 340 Score = 39.3 bits (90), Expect = 0.58, Method: Compositional matrix adjust. Identities = 27/74 (36%), Positives = 40/74 (54%), Gaps = 5/74 (6%) Query: 87 AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK-GVGVDISCKALEIAKSNAVTNG 145 A L + +R +LDLGTGTG + SP ++ G+G+D+S + L +A++N G Sbjct: 142 AAMLKLVGRRPFQSMLDLGTGTGRLLEIF---SPLYRRGIGIDMSREMLTVARANLDKAG 198 Query: 146 VSERFDTLQSDWFS 159 VS Q D FS Sbjct: 199 VSN-AQVRQGDIFS 211 >gi|46580744|ref|YP_011552.1| ribosomal protein L11 methyltransferase [Desulfovibrio vulgaris str. Hildenborough] gi|46450164|gb|AAS96812.1| ribosomal protein L11 methyltransferase, putative [Desulfovibrio vulgaris str. Hildenborough] gi|311234458|gb|ADP87312.1| ribosomal L11 methyltransferase [Desulfovibrio vulgaris RCH1] Length = 283 Score = 39.3 bits (90), Expect = 0.58, Method: Compositional matrix adjust. Identities = 31/79 (39%), Positives = 40/79 (50%), Gaps = 8/79 (10%) Query: 96 RDVVRILDLGTGTG--AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153 R + LDLGTG+G + ALL G G DI A+E A N NGV+E FD + Sbjct: 148 RAGMSFLDLGTGSGILGIGCALLG----LSGTGTDIDPLAVENADENRHINGVAEAFDVM 203 Query: 154 QSDWFSSVEG-LFDVIVSN 171 V G FDV+++N Sbjct: 204 AGS-TEVVRGRTFDVVLAN 221 >gi|327438590|dbj|BAK14955.1| SAM-dependent methyltransferase [Solibacillus silvestris StLB046] Length = 454 Score = 39.3 bits (90), Expect = 0.59, Method: Compositional matrix adjust. Identities = 36/121 (29%), Positives = 63/121 (52%), Gaps = 17/121 (14%) Query: 62 NVRLTLSSDTF-EPRP-ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119 NVR +S+ +F + P +TE+L AL ++ + R++D G G++ L L +++ Sbjct: 274 NVRFEISARSFYQVNPVQTEVLYKQALDYA----QLTGNERVIDAYCGIGSISLFLAQKA 329 Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERF------DTLQSDWFSSVEGL-FDVIVSNP 172 +GV+I +A+E AK NA NG + + + + W+ EG DV+V +P Sbjct: 330 GHV--MGVEIVEQAIEDAKRNAALNGFTNTYFEAGPAEEVIPRWYK--EGKEADVLVVDP 385 Query: 173 P 173 P Sbjct: 386 P 386 >gi|259907667|ref|YP_002648023.1| Putative enzyme [Erwinia pyrifoliae Ep1/96] gi|224963289|emb|CAX54774.1| Putative enzyme [Erwinia pyrifoliae Ep1/96] Length = 256 Score = 39.3 bits (90), Expect = 0.59, Method: Compositional matrix adjust. Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 4/82 (4%) Query: 97 DVVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQS 155 +V R LD+G+G+G + L L + + + V++ A A+ N + ++ Q+ Sbjct: 55 NVQRALDIGSGSGLIALMLAQRTADRVHIDAVELDEAAALQAQENVAASPWPDKVRVQQA 114 Query: 156 D---WFSSVEGLFDVIVSNPPY 174 D W E + +IVSNPPY Sbjct: 115 DIVEWTQRCEHRYSLIVSNPPY 136 >gi|209527492|ref|ZP_03275996.1| Methyltransferase type 11 [Arthrospira maxima CS-328] gi|209492100|gb|EDZ92451.1| Methyltransferase type 11 [Arthrospira maxima CS-328] Length = 441 Score = 39.3 bits (90), Expect = 0.59, Method: Compositional matrix adjust. Identities = 25/91 (27%), Positives = 45/91 (49%), Gaps = 6/91 (6%) Query: 84 SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143 +A F + ++ +RILD G GTG+ L++ +P + +G+D+S A+ A+ Sbjct: 73 AAYGFCTGQKPQKTKIRILDAGCGTGSSTEYLIQLNPEAEVLGIDLSSGAIATAQERCRR 132 Query: 144 NGVS------ERFDTLQSDWFSSVEGLFDVI 168 +G+S +F + +EG FD I Sbjct: 133 SGISTPGTPEPQFQQMSLYDVGQLEGEFDFI 163 >gi|120601968|ref|YP_966368.1| ribosomal L11 methyltransferase [Desulfovibrio vulgaris DP4] gi|120562197|gb|ABM27941.1| [LSU ribosomal protein L11P]-lysine N-methyltransferase [Desulfovibrio vulgaris DP4] Length = 283 Score = 39.3 bits (90), Expect = 0.59, Method: Compositional matrix adjust. Identities = 31/79 (39%), Positives = 40/79 (50%), Gaps = 8/79 (10%) Query: 96 RDVVRILDLGTGTG--AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153 R + LDLGTG+G + ALL G G DI A+E A N NGV+E FD + Sbjct: 148 RAGMSFLDLGTGSGILGIGCALLG----LSGTGTDIDPLAVENADENRHINGVAEAFDVM 203 Query: 154 QSDWFSSVEG-LFDVIVSN 171 V G FDV+++N Sbjct: 204 AGS-TEVVRGRTFDVVLAN 221 >gi|50305189|ref|XP_452553.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|49641686|emb|CAH01404.1| KLLA0C07931p [Kluyveromyces lactis] Length = 232 Score = 39.3 bits (90), Expect = 0.59, Method: Compositional matrix adjust. Identities = 31/99 (31%), Positives = 46/99 (46%), Gaps = 29/99 (29%) Query: 57 WRDFYNVRLTLSSDTFEPRPE----------------TELLVDSALAFSLPRIEKRDVVR 100 W DFY +L FE PE E L+D+ +++ ++ Sbjct: 18 WDDFY----SLEKQNFEENPEDTGECWFADNDAEEKMVEFLLDNLGEYNI-----KEDSS 68 Query: 101 ILDLGTGTGAVCLALLKESPFFKG--VGVDISCKALEIA 137 ++DLGTG G + LL+E FKG +GVD S K++E A Sbjct: 69 MIDLGTGNGHLLFTLLEEG--FKGEMIGVDYSEKSVEFA 105 >gi|56751462|ref|YP_172163.1| hypothetical protein syc1453_c [Synechococcus elongatus PCC 6301] gi|81298857|ref|YP_399065.1| ubiquinone/menaquinone biosynthesis methylase-like protein [Synechococcus elongatus PCC 7942] gi|56686421|dbj|BAD79643.1| hypothetical protein [Synechococcus elongatus PCC 6301] gi|81167738|gb|ABB56078.1| Methylase involved in ubiquinone/menaquinone biosynthesis-like [Synechococcus elongatus PCC 7942] Length = 447 Score = 39.3 bits (90), Expect = 0.59, Method: Compositional matrix adjust. Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 1/69 (1%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFS 159 ILD+G G+G L L +P + +GVD+S K++E+A+ G E +F L D Sbjct: 61 ILDVGCGSGYKTLMLALANPGAEIIGVDLSLKSVELAQERLKFQGFPEVKFYALGLDEIG 120 Query: 160 SVEGLFDVI 168 +E FD I Sbjct: 121 QLEIAFDYI 129 >gi|261364176|ref|ZP_05977059.1| ribosomal protein L11 methyltransferase [Neisseria mucosa ATCC 25996] gi|288567782|gb|EFC89342.1| ribosomal protein L11 methyltransferase [Neisseria mucosa ATCC 25996] Length = 295 Score = 39.3 bits (90), Expect = 0.59, Method: Compositional matrix adjust. Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 11/74 (14%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDW 157 +LD G G+G + +A LK VGVDI +A+ +K NA N V +F D L Sbjct: 167 VLDYGCGSGILTIAALKLGAG-SAVGVDIDEQAIRASKDNAAQNNVDAQFYLPDGLP--- 222 Query: 158 FSSVEGLFDVIVSN 171 +G FD++V+N Sbjct: 223 ----QGQFDIVVAN 232 >gi|212633321|ref|YP_002309846.1| ribosomal protein L11 methyltransferase [Shewanella piezotolerans WP3] gi|226710113|sp|B8CHY3|PRMA_SHEPW RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11 Mtase gi|212554805|gb|ACJ27259.1| Ribosomal protein L11 methyltransferase [Shewanella piezotolerans WP3] Length = 293 Score = 39.3 bits (90), Expect = 0.59, Method: Compositional matrix adjust. Identities = 26/72 (36%), Positives = 41/72 (56%), Gaps = 4/72 (5%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 ++D G G+G + +A LK K GVDI +A+E +K+NA NGV ++ + Sbjct: 162 VIDFGCGSGILAVAALKLG-AEKVTGVDIDYQAIEASKANAERNGVEDQLALYLPE--DQ 218 Query: 161 VEGLF-DVIVSN 171 EGL D++V+N Sbjct: 219 PEGLIADILVAN 230 >gi|144575060|gb|AAZ43715.2| putative DNA methylase [Mycoplasma synoviae 53] Length = 263 Score = 39.3 bits (90), Expect = 0.59, Method: Compositional matrix adjust. Identities = 22/80 (27%), Positives = 39/80 (48%), Gaps = 7/80 (8%) Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 L++GT GA+ + + S K ++I KALE+A+ N N + + + + D+ Sbjct: 55 LEIGTNNGALSIFVASRSKKLKIDALEIQAKALELAEINVKLNNLENQINLIHGDFNDFY 114 Query: 162 EG-------LFDVIVSNPPY 174 + +DVI NPP+ Sbjct: 115 KNHCNKTLPKYDVIFCNPPF 134 >gi|153801757|ref|ZP_01956343.1| conserved hypothetical protein [Vibrio cholerae MZO-3] gi|124122722|gb|EAY41465.1| conserved hypothetical protein [Vibrio cholerae MZO-3] Length = 340 Score = 39.3 bits (90), Expect = 0.59, Method: Compositional matrix adjust. Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 2/75 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 +++D+G G G + K +P + DIS A+ ++ V N + SD FS Sbjct: 203 KVIDIGCGAGVFGCVMAKLNPHIELEMTDISALAIRSSQETLVANQLHGH--VYPSDMFS 260 Query: 160 SVEGLFDVIVSNPPY 174 +D IV+NPP+ Sbjct: 261 DTGHHYDYIVTNPPF 275 >gi|329116119|ref|ZP_08244836.1| type I restriction-modification system, M subunit [Streptococcus parauberis NCFD 2020] gi|326906524|gb|EGE53438.1| type I restriction-modification system, M subunit [Streptococcus parauberis NCFD 2020] Length = 531 Score = 39.3 bits (90), Expect = 0.60, Method: Compositional matrix adjust. Identities = 27/90 (30%), Positives = 41/90 (45%), Gaps = 9/90 (10%) Query: 94 EKRDVVRILDLGTGTGAVCLAL---LKESPFFKGVGVDISCKALEIAKSNAVTNGV-SER 149 E R I D G+G++ L + L G +++ +A+ N + +GV ER Sbjct: 213 ESRAPFHIYDPAMGSGSLMLNIRRYLINPNQVHYHGQELNTTTFNLARMNLILHGVDKER 272 Query: 150 F-----DTLQSDWFSSVEGLFDVIVSNPPY 174 DTL +DW S FD ++ NPPY Sbjct: 273 MNLNNGDTLDADWPSEEPYQFDSVIMNPPY 302 >gi|315158691|gb|EFU02708.1| type I restriction-modification system, M subunit [Enterococcus faecalis TX0312] Length = 531 Score = 39.3 bits (90), Expect = 0.60, Method: Compositional matrix adjust. Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 9/90 (10%) Query: 94 EKRDVVRILDLGTGTGAVCLAL---LKESPFFKGVGVDISCKALEIAKSNAVTNGV-SER 149 ++R + D G+G++ L + L K G +++ +AK N + +GV +E Sbjct: 215 KERPFFSVFDPTMGSGSLMLNVRNYLTHPDNVKYHGQELNTTTYNLAKMNLILHGVDAEE 274 Query: 150 F-----DTLQSDWFSSVEGLFDVIVSNPPY 174 DTL DW + FD +V NPPY Sbjct: 275 MNIRNGDTLNKDWPTDEPYTFDAVVMNPPY 304 >gi|294788574|ref|ZP_06753816.1| ribosomal protein L11 methyltransferase [Simonsiella muelleri ATCC 29453] gi|294483451|gb|EFG31136.1| ribosomal protein L11 methyltransferase [Simonsiella muelleri ATCC 29453] Length = 296 Score = 39.3 bits (90), Expect = 0.60, Method: Compositional matrix adjust. Identities = 28/75 (37%), Positives = 38/75 (50%), Gaps = 11/75 (14%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSD 156 +LD G G+G + +A LK GVDI +A+ ++ NA N V F DTL Sbjct: 166 NVLDYGCGSGILAIAALKLGA-GSATGVDIDPQAIIASQDNATQNHVQAAFYLPDTLP-- 222 Query: 157 WFSSVEGLFDVIVSN 171 EG FDV+V+N Sbjct: 223 -----EGQFDVVVAN 232 >gi|325684219|gb|EGD26395.1| ribosomal protein L11 methyltransferase [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 314 Score = 39.3 bits (90), Expect = 0.60, Method: Compositional matrix adjust. Identities = 30/103 (29%), Positives = 54/103 (52%), Gaps = 10/103 (9%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 + + D+GTG+G + +A K K V DIS +++ AK NA NG+ + ++ Sbjct: 178 LTVADVGTGSGILAIAAHKLGA--KSVLATDISDESMTAAKENAALNGIQD-IALQKTSL 234 Query: 158 FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200 + V+G FD+IV+N + +++D + D +S DG + Sbjct: 235 LAGVDGKFDLIVAN--ILAEILLDL----IPQLDSHLSEDGQV 271 >gi|310764826|gb|ADP09776.1| Putative enzyme [Erwinia sp. Ejp617] Length = 245 Score = 39.3 bits (90), Expect = 0.60, Method: Compositional matrix adjust. Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 4/82 (4%) Query: 97 DVVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQS 155 +V R LD+G+G+G + L L + + + V++ A A+ N + ++ Q+ Sbjct: 44 NVQRALDIGSGSGLIALMLAQRTADRVHIDAVELDEAAALQAQENVAASPWPDKVRVRQA 103 Query: 156 D---WFSSVEGLFDVIVSNPPY 174 D W E + +IVSNPPY Sbjct: 104 DIVEWTQRCEHRYSLIVSNPPY 125 >gi|308177328|ref|YP_003916734.1| methyltransferase [Arthrobacter arilaitensis Re117] gi|307744791|emb|CBT75763.1| putative methyltransferase [Arthrobacter arilaitensis Re117] Length = 408 Score = 39.3 bits (90), Expect = 0.60, Method: Compositional matrix adjust. Identities = 32/125 (25%), Positives = 53/125 (42%), Gaps = 14/125 (11%) Query: 97 DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 D+ D+GTGTG V A+L + +G DI +A++ A N G+S + Sbjct: 229 DLSLAFDIGTGTG-VLSAVLAHRGVKQVIGTDIHQRAVDCANDNFARLGISAAAHAQLTS 287 Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216 F EG ++V NPP++ L + D + ++ + G+ H Sbjct: 288 MFP--EGRAPLVVCNPPWLPGSAPSTLDAAIYDPESKMLMQ-----------FLRGLPGH 334 Query: 217 LNKDG 221 L K+G Sbjct: 335 LTKNG 339 >gi|254439341|ref|ZP_05052835.1| Methyltransferase small domain family [Octadecabacter antarcticus 307] gi|198254787|gb|EDY79101.1| Methyltransferase small domain family [Octadecabacter antarcticus 307] Length = 253 Score = 39.3 bits (90), Expect = 0.60, Method: Compositional matrix adjust. Identities = 37/133 (27%), Positives = 55/133 (41%), Gaps = 8/133 (6%) Query: 60 FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119 F RLTL T R + ++ +A + R +L+LG GTGA L L Sbjct: 12 FLGGRLTLQQPTKGYRAGVDPVLLAAA------VRARVGQSVLELGCGTGAALLCLATRV 65 Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ-SDWFSSVEGL-FDVIVSNPPYIES 177 V++ +I ++NAV N + T D + + L FD ++ NPPY E Sbjct: 66 SGLGLHAVEVQPHYADICRANAVANHIDAMIWTADLRDLPADLRALTFDHVIVNPPYFER 125 Query: 178 VIVDCLGLEVRDF 190 + L RD Sbjct: 126 ASGNSSPLPDRDI 138 >gi|298292298|ref|YP_003694237.1| ArsR family transcriptional regulator [Starkeya novella DSM 506] gi|296928809|gb|ADH89618.1| transcriptional regulator, ArsR family [Starkeya novella DSM 506] Length = 338 Score = 39.3 bits (90), Expect = 0.61, Method: Compositional matrix adjust. Identities = 28/71 (39%), Positives = 40/71 (56%), Gaps = 7/71 (9%) Query: 76 PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135 PETE V+SA+ L + V +LDLGTGTG + E +GVG+D+S + L Sbjct: 139 PETE--VESAIKSIL---SGQRVGALLDLGTGTGRILELFADE--MERGVGIDLSAEMLA 191 Query: 136 IAKSNAVTNGV 146 +A++N GV Sbjct: 192 VARANLERAGV 202 >gi|257887591|ref|ZP_05667244.1| conserved hypothetical protein [Enterococcus faecium 1,141,733] gi|257823645|gb|EEV50577.1| conserved hypothetical protein [Enterococcus faecium 1,141,733] Length = 185 Score = 39.3 bits (90), Expect = 0.61, Method: Compositional matrix adjust. Identities = 32/113 (28%), Positives = 52/113 (46%), Gaps = 10/113 (8%) Query: 75 RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134 RP T+ + +S P D +LDL G+G + + + V VD + +AL Sbjct: 22 RPTTDKVKESIFNMIGPYF---DGETVLDLFAGSGGLAIEAVSRG-CSHAVCVDKNYQAL 77 Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPPYIESVIVD 181 +I K N E+F T++ D ++E L FD + +PPY + I+D Sbjct: 78 KIIKENIEITKEPEKFTTIKLDADKAIERLATEKQQFDYLFLDPPYAKQKIID 130 >gi|197302048|ref|ZP_03167109.1| hypothetical protein RUMLAC_00776 [Ruminococcus lactaris ATCC 29176] gi|197298857|gb|EDY33396.1| hypothetical protein RUMLAC_00776 [Ruminococcus lactaris ATCC 29176] Length = 559 Score = 39.3 bits (90), Expect = 0.61, Method: Compositional matrix adjust. Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 10/78 (12%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWF 158 + DL +GTG + L +P K V GV+I +A+E AK NA+ NG+S +F + D F Sbjct: 314 VFDLFSGTGTIGQVL---APVAKKVIGVEIIEEAVEAAKENALRNGLSNCKF--IAGDVF 368 Query: 159 S---SVEGLFDVIVSNPP 173 +E DVIV +PP Sbjct: 369 KVLDEIEEKPDVIVLDPP 386 >gi|170039575|ref|XP_001847606.1| prip interacting protein, pimt [Culex quinquefasciatus] gi|167863124|gb|EDS26507.1| prip interacting protein, pimt [Culex quinquefasciatus] Length = 1016 Score = 39.3 bits (90), Expect = 0.61, Method: Composition-based stats. Identities = 35/135 (25%), Positives = 66/135 (48%), Gaps = 11/135 (8%) Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPY-IESVIVDC 182 + +DI K +E+AK NA GV++R + + D+ + + L D + +PP+ S + D Sbjct: 883 IAIDIDPKKIEMAKHNAAVYGVADRIEFIVGDFLALADRLQADAVFLSPPWGGPSYLKD- 941 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG---LCSVEIGYNQKVDVVRIF 239 EV D + + + + R I+ V+ +L ++ ++ G N V++ + F Sbjct: 942 ---EVYDLEASLIPVPATELMRKARQISPNVALYLPRNSNTQQLTMLAGPNNAVEIEQNF 998 Query: 240 ESRKLFLVNAFKDYG 254 RKL + A+ YG Sbjct: 999 LDRKLIALTAY--YG 1011 >gi|45358902|ref|NP_988459.1| SAM-binding motif-containing protein [Methanococcus maripaludis S2] gi|45047768|emb|CAF30895.1| SAM (and some other nucleotide) binding motif [Methanococcus maripaludis S2] Length = 264 Score = 39.3 bits (90), Expect = 0.61, Method: Compositional matrix adjust. Identities = 37/141 (26%), Positives = 61/141 (43%), Gaps = 12/141 (8%) Query: 94 EKRDVVRILDLGTGTGAVCLALLKESPFFKG--VGVDISCKALEIAKSNAVTNGVSERFD 151 EK D+ +L++GTG+G + + + K +F+ D L+IAK N N ++ + + Sbjct: 83 EKDDIKDVLEIGTGSGIISILIAK---YFECNVTATDTVSDYLKIAKDNISKNNLTSKIN 139 Query: 152 TLQS------DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL-DGGIDGLS 204 + S D FD+I+S PPY V F + L GG G Sbjct: 140 LIDSKGKIIFDIPELKNKKFDLIISYPPYYADNSVASKRSFGGAFASEVELIGGGAYGEV 199 Query: 205 HYRTIADGVSRHLNKDGLCSV 225 + I + HLN G+ ++ Sbjct: 200 FSQKIIEEGMDHLNNGGIVAI 220 >gi|307823227|ref|ZP_07653457.1| ribosomal L11 methyltransferase [Methylobacter tundripaludum SV96] gi|307736002|gb|EFO06849.1| ribosomal L11 methyltransferase [Methylobacter tundripaludum SV96] Length = 242 Score = 39.3 bits (90), Expect = 0.62, Method: Compositional matrix adjust. Identities = 29/97 (29%), Positives = 49/97 (50%), Gaps = 6/97 (6%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+LD+GTGTG + L + + K V+++ A + A N + +R + + D S Sbjct: 38 RVLDIGTGTGVLAL-MAAQLGAAKVTAVELTQVAFKEADINFNNSPWVDRLEAVHQDIQS 96 Query: 160 ---SVEGLFDVIVSNPPYIESVI--VDCLGLEVRDFD 191 + +D+I+SNPP+ E+ + VD L R D Sbjct: 97 FALTASRQYDLIISNPPFFENHLKTVDTLRNSARHTD 133 >gi|160913554|ref|ZP_02076245.1| hypothetical protein EUBDOL_00030 [Eubacterium dolichum DSM 3991] gi|158434106|gb|EDP12395.1| hypothetical protein EUBDOL_00030 [Eubacterium dolichum DSM 3991] Length = 189 Score = 39.3 bits (90), Expect = 0.62, Method: Compositional matrix adjust. Identities = 37/144 (25%), Positives = 65/144 (45%), Gaps = 12/144 (8%) Query: 46 LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLG 105 ++ E RI+ + + R+ + + RP T+ + ++ + P D ILDL Sbjct: 1 MRSEKNMRIVAGK--FGSRVIQAVEGQTTRPTTDKVKEAIFSRIGPYF---DGGSILDLF 55 Query: 106 TGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL- 164 G+GA+ L + V VD++ KA+ SN GV + L+ D+ +++ L Sbjct: 56 AGSGAISLEAISRG-MEHAVLVDMNGKAISTITSNIKALGVRDACTVLKMDYKTALHKLE 114 Query: 165 -----FDVIVSNPPYIESVIVDCL 183 FDV+ +PPY + I L Sbjct: 115 EQKQSFDVVFLDPPYKKQQISSIL 138 >gi|69247256|ref|ZP_00604274.1| Conserved hypothetical protein 95 [Enterococcus faecium DO] gi|257878119|ref|ZP_05657772.1| conserved hypothetical protein [Enterococcus faecium 1,230,933] gi|257881095|ref|ZP_05660748.1| conserved hypothetical protein [Enterococcus faecium 1,231,502] gi|257884758|ref|ZP_05664411.1| conserved hypothetical protein [Enterococcus faecium 1,231,501] gi|257889682|ref|ZP_05669335.1| conserved hypothetical protein [Enterococcus faecium 1,231,410] gi|257892381|ref|ZP_05672034.1| conserved hypothetical protein [Enterococcus faecium 1,231,408] gi|258616379|ref|ZP_05714149.1| methylase, putative [Enterococcus faecium DO] gi|260559168|ref|ZP_05831354.1| conserved hypothetical protein [Enterococcus faecium C68] gi|261207703|ref|ZP_05922388.1| conserved hypothetical protein [Enterococcus faecium TC 6] gi|289566279|ref|ZP_06446710.1| RsmD family RNA methyltransferase [Enterococcus faecium D344SRF] gi|293563699|ref|ZP_06678139.1| putative methyltransferase [Enterococcus faecium E1162] gi|293569401|ref|ZP_06680698.1| putative methyltransferase [Enterococcus faecium E1071] gi|294615869|ref|ZP_06695711.1| RNA methyltransferase, RsmD family [Enterococcus faecium E1636] gi|294617304|ref|ZP_06696945.1| RNA methyltransferase, RsmD family [Enterococcus faecium E1679] gi|294623500|ref|ZP_06702348.1| putative methyltransferase [Enterococcus faecium U0317] gi|314938775|ref|ZP_07846049.1| RNA methyltransferase, RsmD family [Enterococcus faecium TX0133a04] gi|314941125|ref|ZP_07848022.1| RNA methyltransferase, RsmD family [Enterococcus faecium TX0133C] gi|314947924|ref|ZP_07851329.1| RNA methyltransferase, RsmD family [Enterococcus faecium TX0082] gi|314953021|ref|ZP_07855981.1| RNA methyltransferase, RsmD family [Enterococcus faecium TX0133A] gi|314993350|ref|ZP_07858720.1| RNA methyltransferase, RsmD family [Enterococcus faecium TX0133B] gi|314997589|ref|ZP_07862520.1| RNA methyltransferase, RsmD family [Enterococcus faecium TX0133a01] gi|68194929|gb|EAN09398.1| Conserved hypothetical protein 95 [Enterococcus faecium DO] gi|257812347|gb|EEV41105.1| conserved hypothetical protein [Enterococcus faecium 1,230,933] gi|257816753|gb|EEV44081.1| conserved hypothetical protein [Enterococcus faecium 1,231,502] gi|257820596|gb|EEV47744.1| conserved hypothetical protein [Enterococcus faecium 1,231,501] gi|257826042|gb|EEV52668.1| conserved hypothetical protein [Enterococcus faecium 1,231,410] gi|257828760|gb|EEV55367.1| conserved hypothetical protein [Enterococcus faecium 1,231,408] gi|260074925|gb|EEW63241.1| conserved hypothetical protein [Enterococcus faecium C68] gi|260078086|gb|EEW65792.1| conserved hypothetical protein [Enterococcus faecium TC 6] gi|289161919|gb|EFD09788.1| RsmD family RNA methyltransferase [Enterococcus faecium D344SRF] gi|291587927|gb|EFF19778.1| putative methyltransferase [Enterococcus faecium E1071] gi|291591255|gb|EFF22922.1| RNA methyltransferase, RsmD family [Enterococcus faecium E1636] gi|291596461|gb|EFF27713.1| RNA methyltransferase, RsmD family [Enterococcus faecium E1679] gi|291597094|gb|EFF28297.1| putative methyltransferase [Enterococcus faecium U0317] gi|291604277|gb|EFF33771.1| putative methyltransferase [Enterococcus faecium E1162] gi|313588306|gb|EFR67151.1| RNA methyltransferase, RsmD family [Enterococcus faecium TX0133a01] gi|313592177|gb|EFR71022.1| RNA methyltransferase, RsmD family [Enterococcus faecium TX0133B] gi|313594896|gb|EFR73741.1| RNA methyltransferase, RsmD family [Enterococcus faecium TX0133A] gi|313599985|gb|EFR78828.1| RNA methyltransferase, RsmD family [Enterococcus faecium TX0133C] gi|313641913|gb|EFS06493.1| RNA methyltransferase, RsmD family [Enterococcus faecium TX0133a04] gi|313645693|gb|EFS10273.1| RNA methyltransferase, RsmD family [Enterococcus faecium TX0082] Length = 186 Score = 39.3 bits (90), Expect = 0.62, Method: Compositional matrix adjust. Identities = 32/113 (28%), Positives = 52/113 (46%), Gaps = 10/113 (8%) Query: 75 RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134 RP T+ + +S P D +LDL G+G + + + V VD + +AL Sbjct: 22 RPTTDKVKESIFNMIGPYF---DGETVLDLFAGSGGLAIEAVSRG-CSHAVCVDKNYQAL 77 Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPPYIESVIVD 181 +I K N E+F T++ D ++E L FD + +PPY + I+D Sbjct: 78 KIIKENIEITKEPEKFTTIKLDADKAIERLAAEKQQFDYLFLDPPYAKQKIID 130 >gi|326470899|gb|EGD94908.1| hypothetical protein TESG_02408 [Trichophyton tonsurans CBS 112818] gi|326478462|gb|EGE02472.1| hypothetical protein TEQG_01508 [Trichophyton equinum CBS 127.97] Length = 296 Score = 39.3 bits (90), Expect = 0.62, Method: Compositional matrix adjust. Identities = 33/91 (36%), Positives = 47/91 (51%), Gaps = 23/91 (25%) Query: 101 ILDLGTGTGAVCLALLKESPFFKG--VGVDISCKALEIAKSNAVT----NGVS-ERFDTL 153 ILDLGTG G++ L LL+E F G VGVD S K++E+A+ A G+ E +D L Sbjct: 107 ILDLGTGNGSM-LTLLREEGGFSGPMVGVDYSVKSIELARRLAGQGEGDGGIRFEVWDIL 165 Query: 154 ---------------QSDWFSSVEGLFDVIV 169 + DWF +G FD+++ Sbjct: 166 DPRHEGDIRSGVFGKEVDWFPFEQGGFDIVL 196 >gi|313891792|ref|ZP_07825397.1| methyltransferase small domain protein [Dialister microaerophilus UPII 345-E] gi|313119786|gb|EFR42973.1| methyltransferase small domain protein [Dialister microaerophilus UPII 345-E] Length = 246 Score = 39.3 bits (90), Expect = 0.62, Method: Compositional matrix adjust. Identities = 32/97 (32%), Positives = 46/97 (47%), Gaps = 7/97 (7%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 +DS L I+ +D +I DLGTGTG + L LL +I+ +IAK N Sbjct: 33 IDSVLLAHYVSIKNKD--KIADLGTGTGIIPL-LLSALGAKDIAAFEINPVMADIAKRNV 89 Query: 142 VTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPY 174 N ++ L+ D+ E G F +V+NPPY Sbjct: 90 SGNKKNDIIKVLECDYKKIKEYYPTGSFTSVVANPPY 126 >gi|313898494|ref|ZP_07832031.1| putative 23S rRNA m5C1962 methyltransferase [Clostridium sp. HGF2] gi|312956876|gb|EFR38507.1| putative 23S rRNA m5C1962 methyltransferase [Clostridium sp. HGF2] Length = 400 Score = 39.3 bits (90), Expect = 0.62, Method: Compositional matrix adjust. Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 5/78 (6%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R++D + TG L + + V VD+S AL+ A +NA N + R +++D F Sbjct: 230 RVMDCFSHTGGFALNAAYGNAS-QVVAVDVSQTALDQAYANAKLNHLENRISFVKADVFK 288 Query: 160 SV----EGLFDVIVSNPP 173 + EG FD+IV +PP Sbjct: 289 YLDTCKEGQFDIIVLDPP 306 >gi|296327942|ref|ZP_06870477.1| RsmD family RNA methyltransferase [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|296154898|gb|EFG95680.1| RsmD family RNA methyltransferase [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 182 Score = 39.3 bits (90), Expect = 0.62, Method: Compositional matrix adjust. Identities = 33/126 (26%), Positives = 58/126 (46%), Gaps = 10/126 (7%) Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 R+ + F+ RP E + +S + P IE LDL +G+G++ L + + Sbjct: 11 RIIKTRKGFDTRPTLESVKESLFSIIAPYIEGS---IFLDLFSGSGSISLEAISRGAK-R 66 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPPYIES 177 V ++ +AL+ N G S+R ++D ++E L FD+I +PPY ++ Sbjct: 67 AVMIEKDGEALKYIIENIDNLGFSDRCRAYKNDVIRAIEILGRKNEKFDIIFMDPPYQDN 126 Query: 178 VIVDCL 183 V L Sbjct: 127 VTKKVL 132 >gi|282165451|ref|YP_003357836.1| putative methyltransferase [Methanocella paludicola SANAE] gi|282157765|dbj|BAI62853.1| putative methyltransferase [Methanocella paludicola SANAE] Length = 220 Score = 39.3 bits (90), Expect = 0.62, Method: Compositional matrix adjust. Identities = 18/55 (32%), Positives = 33/55 (60%) Query: 93 IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147 +E+ RILD+GTG G + +A+ ++ + G+D+S ++IA + A GV+ Sbjct: 44 LERLPAGRILDVGTGPGRLPIAIASKNKYVHVTGLDLSADMVKIAPALAAKRGVT 98 >gi|282883270|ref|ZP_06291868.1| protein YpsC [Peptoniphilus lacrimalis 315-B] gi|281296900|gb|EFA89398.1| protein YpsC [Peptoniphilus lacrimalis 315-B] Length = 378 Score = 39.3 bits (90), Expect = 0.62, Method: Compositional matrix adjust. Identities = 20/54 (37%), Positives = 34/54 (62%), Gaps = 1/54 (1%) Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFS-SVEGLFDVIVSNPPYIESVIV 180 D+S KA+E+AK+N+ G+ E + Q D + +E + V+++NPPY E + V Sbjct: 259 DVSYKAIEVAKNNSAILGLDEDINFFQKDIRNLDLEDNYGVLITNPPYGERLAV 312 >gi|257076612|ref|ZP_05570973.1| ribosomal protein L11 methyltransferase [Ferroplasma acidarmanus fer1] Length = 204 Score = 39.3 bits (90), Expect = 0.62, Method: Compositional matrix adjust. Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 9/76 (11%) Query: 101 ILDLGTGTG--AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 ++DLGTGTG A+ L S G+DI +EI++ NA +E ++ Sbjct: 58 VIDLGTGTGIFAIGSCYLGAS---HATGIDIDPAMIEISRRNAEPFPCAEFINS----SI 110 Query: 159 SSVEGLFDVIVSNPPY 174 S V G +D ++ NPP+ Sbjct: 111 SEVHGNYDTVIMNPPF 126 >gi|281411982|ref|YP_003346061.1| ubiquinone/menaquinone biosynthesis methyltransferase [Thermotoga naphthophila RKU-10] gi|281373085|gb|ADA66647.1| ubiquinone/menaquinone biosynthesis methyltransferase [Thermotoga naphthophila RKU-10] Length = 220 Score = 39.3 bits (90), Expect = 0.62, Method: Compositional matrix adjust. Identities = 19/40 (47%), Positives = 26/40 (65%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKS 139 ++LDL TGTG V L +++P K G+D S K LEIA+ Sbjct: 41 KVLDLATGTGDVARLLKRKAPHLKITGLDSSSKMLEIAEK 80 >gi|34557787|ref|NP_907602.1| Type I restriction enzyme modification subunit [Wolinella succinogenes DSM 1740] gi|34483504|emb|CAE10502.1| TYPE I RESTRICTION ENZYME (MODIFICATION SUBUNIT) [Wolinella succinogenes] Length = 560 Score = 39.3 bits (90), Expect = 0.62, Method: Compositional matrix adjust. Identities = 48/194 (24%), Positives = 76/194 (39%), Gaps = 31/194 (15%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGT---------GTGAVCLALLKESPFFKGVGVDISCK 132 ++ +S P+ ++ +LD+ G G + L+L K S + G ++ + Sbjct: 108 LNKLYVYSTPQEVNELIISLLDIAPKDEVYNPCYGMGTLFLSLSKRSKTIRLFGEELDGR 167 Query: 133 ALEIAKSNAVTNGVSERF----DTLQSDWFSSVEGL--FDVIVSNPPYIESVIVDCLGLE 186 +IAK A G+ E D L+ F + +G FD IV NPP+ LG+E Sbjct: 168 LAKIAKLMARVGGIQEMHLFVNDILKKPVFKNEKGFRQFDKIVCNPPF-----SAHLGIE 222 Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246 D R S G + S HL + G V +VR +K FL Sbjct: 223 YLKNDERFSRYGILAKSSPELVFLTHALMHLKQRG-----------VFIVRNQTLQKSFL 271 Query: 247 VNAFKDYGGNDRVL 260 ++ DRV+ Sbjct: 272 EEKLRERMVEDRVI 285 >gi|300814276|ref|ZP_07094548.1| conserved hypothetical protein [Peptoniphilus sp. oral taxon 836 str. F0141] gi|300511543|gb|EFK38771.1| conserved hypothetical protein [Peptoniphilus sp. oral taxon 836 str. F0141] Length = 378 Score = 39.3 bits (90), Expect = 0.63, Method: Compositional matrix adjust. Identities = 20/54 (37%), Positives = 34/54 (62%), Gaps = 1/54 (1%) Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFS-SVEGLFDVIVSNPPYIESVIV 180 D+S KA+E+AK+N+ G+ E + Q D + +E + V+++NPPY E + V Sbjct: 259 DVSYKAIEVAKNNSAILGLDEDINFFQKDIRNLDLEDNYGVLITNPPYGERLAV 312 >gi|268319353|ref|YP_003293009.1| methyltransferase , ribosomal protein L11 [Lactobacillus johnsonii FI9785] gi|262397728|emb|CAX66742.1| methyltransferase , ribosomal protein L11 [Lactobacillus johnsonii FI9785] Length = 315 Score = 39.3 bits (90), Expect = 0.63, Method: Compositional matrix adjust. Identities = 28/102 (27%), Positives = 52/102 (50%), Gaps = 8/102 (7%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 + +LD+GTG+G + +A K +G DIS +A+ AK N N + + D +++ Sbjct: 179 MSVLDVGTGSGILAIAASKLGASHV-LGTDISDEAVTAAKENIALNNI-DNIDVRKANLL 236 Query: 159 SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200 + +D+IV+N ++ D L + D D ++ +G I Sbjct: 237 KDINEKYDLIVAN------ILADILLELIPDLDNHLNENGKI 272 >gi|219558681|ref|ZP_03537757.1| hypothetical protein MtubT1_15792 [Mycobacterium tuberculosis T17] gi|289570849|ref|ZP_06451076.1| conserved hypothetical protein [Mycobacterium tuberculosis T17] gi|289544603|gb|EFD48251.1| conserved hypothetical protein [Mycobacterium tuberculosis T17] Length = 250 Score = 39.3 bits (90), Expect = 0.63, Method: Compositional matrix adjust. Identities = 32/122 (26%), Positives = 48/122 (39%), Gaps = 19/122 (15%) Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV-----------------RILDLGTG 107 +T D +P E+ D +A LP D+ +LD GTG Sbjct: 1 MTAQFDPADPTRFEEMYRDDRVAHGLPAATPWDIGGPQPVVQQLVALGAIRGEVLDPGTG 60 Query: 108 TGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDV 167 G A+ + + G+D S A+E A+ NA GVS F + ++G FD Sbjct: 61 PGH--HAIYYAAKGYAATGIDGSVAAIERARDNARKAGVSVNFQVGDATTLDGLDGRFDT 118 Query: 168 IV 169 +V Sbjct: 119 VV 120 >gi|221134702|ref|ZP_03561005.1| methyltransferase small [Glaciecola sp. HTCC2999] Length = 247 Score = 39.3 bits (90), Expect = 0.63, Method: Compositional matrix adjust. Identities = 22/81 (27%), Positives = 47/81 (58%), Gaps = 6/81 (7%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQS---D 156 ILD+G+G+G + L + ++S + GV+ K+ E + N+++ + + +QS Sbjct: 47 ILDIGSGSGVLSLMMAQQSAEHAHITGVETDKKSFEQSIKNSLSTRFNAKIKFVQSRIQH 106 Query: 157 WFSSVEGLFDVIVSNPPYIES 177 ++SS + +I+SNPP+ ++ Sbjct: 107 FYSSQR--YHLIISNPPHFQN 125 >gi|88802991|ref|ZP_01118518.1| tRNA (uracil-5-) -methyltransferase [Polaribacter irgensii 23-P] gi|88781849|gb|EAR13027.1| tRNA (uracil-5-) -methyltransferase [Polaribacter irgensii 23-P] Length = 485 Score = 39.3 bits (90), Expect = 0.63, Method: Compositional matrix adjust. Identities = 32/114 (28%), Positives = 57/114 (50%), Gaps = 12/114 (10%) Query: 72 FEPRPE-TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130 F+ P+ E L + + + L K D ++DL GTG + + +S + +GVDI Sbjct: 309 FQTNPKCAEKLYNKVVEYVLEDKTKVDNTVVMDLFCGTGTIGQIVASKSKNAQIIGVDIV 368 Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY---IESVIVD 181 A+E A+ NA N ++ +F++ G F + S+P Y I+++I+D Sbjct: 369 ASAIEDAEKNAKRNNIT------GVQFFAADVGKF--LTSHPEYENKIKTIILD 414 >gi|315152687|gb|EFT96703.1| type I restriction-modification system, M subunit [Enterococcus faecalis TX0031] Length = 531 Score = 39.3 bits (90), Expect = 0.63, Method: Compositional matrix adjust. Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 9/90 (10%) Query: 94 EKRDVVRILDLGTGTGAVCLAL---LKESPFFKGVGVDISCKALEIAKSNAVTNGV-SER 149 ++R + D G+G++ L + L K G +++ +AK N + +GV +E Sbjct: 215 KERPFFSVFDPTMGSGSLMLNVRNYLTHPDNVKYHGQELNTTTYNLAKMNLILHGVDAEE 274 Query: 150 F-----DTLQSDWFSSVEGLFDVIVSNPPY 174 DTL DW + FD +V NPPY Sbjct: 275 MNLRNGDTLNKDWPTDEPYTFDAVVMNPPY 304 >gi|88601597|ref|YP_501775.1| hypothetical protein Mhun_0285 [Methanospirillum hungatei JF-1] gi|88187059|gb|ABD40056.1| conserved hypothetical protein [Methanospirillum hungatei JF-1] Length = 242 Score = 39.3 bits (90), Expect = 0.63, Method: Compositional matrix adjust. Identities = 29/104 (27%), Positives = 51/104 (49%), Gaps = 10/104 (9%) Query: 69 SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128 ++ F P EL + L+F I R + I++LG+GTG +L + P ++ +D Sbjct: 37 TNLFRILPNAELFFSTCLSF----IPHRKI-SIMELGSGTGYFTALMLSQYPEYQITCMD 91 Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSN 171 S + LE+AK G + ++ D + + EG +D I+S Sbjct: 92 KSPEMLELAKRKEELTGCT----FIEGDITTGLPEGNYDCIIST 131 >gi|15609812|ref|NP_217191.1| hypothetical protein Rv2675c [Mycobacterium tuberculosis H37Rv] gi|15842213|ref|NP_337250.1| hypothetical protein MT2749 [Mycobacterium tuberculosis CDC1551] gi|31793847|ref|NP_856340.1| hypothetical protein Mb2694c [Mycobacterium bovis AF2122/97] gi|121638550|ref|YP_978774.1| hypothetical protein BCG_2688c [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148662516|ref|YP_001284039.1| hypothetical protein MRA_2703 [Mycobacterium tuberculosis H37Ra] gi|148823865|ref|YP_001288619.1| hypothetical protein TBFG_12690 [Mycobacterium tuberculosis F11] gi|167970103|ref|ZP_02552380.1| hypothetical protein MtubH3_19538 [Mycobacterium tuberculosis H37Ra] gi|215404638|ref|ZP_03416819.1| hypothetical protein Mtub0_13320 [Mycobacterium tuberculosis 02_1987] gi|215412473|ref|ZP_03421213.1| hypothetical protein Mtub9_14035 [Mycobacterium tuberculosis 94_M4241A] gi|215412476|ref|ZP_03421216.1| hypothetical protein Mtub9_14050 [Mycobacterium tuberculosis 94_M4241A] gi|215428101|ref|ZP_03426020.1| hypothetical protein MtubT9_17593 [Mycobacterium tuberculosis T92] gi|215431615|ref|ZP_03429534.1| hypothetical protein MtubE_13273 [Mycobacterium tuberculosis EAS054] gi|218754412|ref|ZP_03533208.1| hypothetical protein MtubG1_13709 [Mycobacterium tuberculosis GM 1503] gi|224991042|ref|YP_002645731.1| hypothetical protein JTY_2682 [Mycobacterium bovis BCG str. Tokyo 172] gi|253798243|ref|YP_003031244.1| hypothetical protein TBMG_01298 [Mycobacterium tuberculosis KZN 1435] gi|254232782|ref|ZP_04926109.1| conserved hypothetical protein [Mycobacterium tuberculosis C] gi|254551730|ref|ZP_05142177.1| hypothetical protein Mtube_14947 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|260187692|ref|ZP_05765166.1| hypothetical protein MtubCP_16914 [Mycobacterium tuberculosis CPHL_A] gi|260201801|ref|ZP_05769292.1| hypothetical protein MtubT4_17325 [Mycobacterium tuberculosis T46] gi|260205985|ref|ZP_05773476.1| hypothetical protein MtubK8_16975 [Mycobacterium tuberculosis K85] gi|289444217|ref|ZP_06433961.1| conserved hypothetical protein [Mycobacterium tuberculosis T46] gi|289448330|ref|ZP_06438074.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A] gi|289553539|ref|ZP_06442749.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 605] gi|289575373|ref|ZP_06455600.1| conserved hypothetical protein [Mycobacterium tuberculosis K85] gi|289746475|ref|ZP_06505853.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987] gi|289751327|ref|ZP_06510705.1| conserved hypothetical protein [Mycobacterium tuberculosis T92] gi|289754777|ref|ZP_06514155.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054] gi|289762846|ref|ZP_06522224.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 1503] gi|294994232|ref|ZP_06799923.1| hypothetical protein Mtub2_06888 [Mycobacterium tuberculosis 210] gi|297635283|ref|ZP_06953063.1| hypothetical protein MtubK4_14225 [Mycobacterium tuberculosis KZN 4207] gi|297732279|ref|ZP_06961397.1| hypothetical protein MtubKR_14374 [Mycobacterium tuberculosis KZN R506] gi|298526145|ref|ZP_07013554.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] gi|298526147|ref|ZP_07013556.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] gi|306776955|ref|ZP_07415292.1| hypothetical protein TMAG_03062 [Mycobacterium tuberculosis SUMu001] gi|306780857|ref|ZP_07419194.1| hypothetical protein TMBG_02812 [Mycobacterium tuberculosis SUMu002] gi|306785480|ref|ZP_07423802.1| hypothetical protein TMCG_01921 [Mycobacterium tuberculosis SUMu003] gi|306790078|ref|ZP_07428400.1| hypothetical protein TMDG_00389 [Mycobacterium tuberculosis SUMu004] gi|306794161|ref|ZP_07432463.1| hypothetical protein TMEG_03352 [Mycobacterium tuberculosis SUMu005] gi|306807523|ref|ZP_07444191.1| hypothetical protein TMGG_02194 [Mycobacterium tuberculosis SUMu007] gi|306968733|ref|ZP_07481394.1| hypothetical protein TMIG_02174 [Mycobacterium tuberculosis SUMu009] gi|306973068|ref|ZP_07485729.1| hypothetical protein TMJG_01658 [Mycobacterium tuberculosis SUMu010] gi|307080776|ref|ZP_07489946.1| hypothetical protein TMKG_03104 [Mycobacterium tuberculosis SUMu011] gi|307085368|ref|ZP_07494481.1| hypothetical protein TMLG_02388 [Mycobacterium tuberculosis SUMu012] gi|313659612|ref|ZP_07816492.1| hypothetical protein MtubKV_14379 [Mycobacterium tuberculosis KZN V2475] gi|1550716|emb|CAB02328.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium tuberculosis H37Rv] gi|13882502|gb|AAK47064.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551] gi|31619441|emb|CAD94879.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium bovis AF2122/97] gi|121494198|emb|CAL72676.1| Conserved hypothetical protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|124601841|gb|EAY60851.1| conserved hypothetical protein [Mycobacterium tuberculosis C] gi|148506668|gb|ABQ74477.1| hypothetical protein MRA_2703 [Mycobacterium tuberculosis H37Ra] gi|148722392|gb|ABR07017.1| conserved hypothetical protein [Mycobacterium tuberculosis F11] gi|224774157|dbj|BAH26963.1| hypothetical protein JTY_2682 [Mycobacterium bovis BCG str. Tokyo 172] gi|253319746|gb|ACT24349.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 1435] gi|289417136|gb|EFD14376.1| conserved hypothetical protein [Mycobacterium tuberculosis T46] gi|289421288|gb|EFD18489.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A] gi|289438171|gb|EFD20664.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 605] gi|289539804|gb|EFD44382.1| conserved hypothetical protein [Mycobacterium tuberculosis K85] gi|289687003|gb|EFD54491.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987] gi|289691914|gb|EFD59343.1| conserved hypothetical protein [Mycobacterium tuberculosis T92] gi|289695364|gb|EFD62793.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054] gi|289710352|gb|EFD74368.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 1503] gi|298495939|gb|EFI31233.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] gi|298495941|gb|EFI31235.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] gi|308214612|gb|EFO74011.1| hypothetical protein TMAG_03062 [Mycobacterium tuberculosis SUMu001] gi|308326258|gb|EFP15109.1| hypothetical protein TMBG_02812 [Mycobacterium tuberculosis SUMu002] gi|308329863|gb|EFP18714.1| hypothetical protein TMCG_01921 [Mycobacterium tuberculosis SUMu003] gi|308333429|gb|EFP22280.1| hypothetical protein TMDG_00389 [Mycobacterium tuberculosis SUMu004] gi|308337496|gb|EFP26347.1| hypothetical protein TMEG_03352 [Mycobacterium tuberculosis SUMu005] gi|308346118|gb|EFP34969.1| hypothetical protein TMGG_02194 [Mycobacterium tuberculosis SUMu007] gi|308353696|gb|EFP42547.1| hypothetical protein TMIG_02174 [Mycobacterium tuberculosis SUMu009] gi|308357542|gb|EFP46393.1| hypothetical protein TMJG_01658 [Mycobacterium tuberculosis SUMu010] gi|308361490|gb|EFP50341.1| hypothetical protein TMKG_03104 [Mycobacterium tuberculosis SUMu011] gi|308365097|gb|EFP53948.1| hypothetical protein TMLG_02388 [Mycobacterium tuberculosis SUMu012] gi|323718735|gb|EGB27896.1| hypothetical protein TMMG_02682 [Mycobacterium tuberculosis CDC1551A] gi|326904289|gb|EGE51222.1| hypothetical protein TBPG_02187 [Mycobacterium tuberculosis W-148] gi|328458015|gb|AEB03438.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 4207] Length = 250 Score = 39.3 bits (90), Expect = 0.63, Method: Compositional matrix adjust. Identities = 32/122 (26%), Positives = 48/122 (39%), Gaps = 19/122 (15%) Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV-----------------RILDLGTG 107 +T D +P E+ D +A LP D+ +LD GTG Sbjct: 1 MTAQFDPADPTRFEEMYRDDRVAHGLPAATPWDIGGPQPVVQQLVALGAIRGEVLDPGTG 60 Query: 108 TGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDV 167 G A+ + + G+D S A+E A+ NA GVS F + ++G FD Sbjct: 61 PGH--HAIYYAAKGYAATGIDGSVAAIERARDNARKAGVSVNFQVGDATTLDGLDGRFDT 118 Query: 168 IV 169 +V Sbjct: 119 VV 120 >gi|328697682|ref|XP_001948506.2| PREDICTED: hypothetical protein LOC100163046 isoform 1 [Acyrthosiphon pisum] Length = 520 Score = 39.3 bits (90), Expect = 0.64, Method: Compositional matrix adjust. Identities = 34/122 (27%), Positives = 57/122 (46%), Gaps = 7/122 (5%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 ++D G G+ + K + +DI K +EIA+ NA GV++R + D+F+ Sbjct: 354 LIDPFCGAGSNVIQFAKTCELV--IAIDIDPKKIEIARHNAELYGVADRIQFIIGDYFTL 411 Query: 161 VEGLF-DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG-LSHYRTIADGVSRHLN 218 L DV+ +PP+ ++D LE + GGI +S R I ++ HL Sbjct: 412 APTLKGDVVFLSPPWGGPDLMD---LEEYKLSYIMPEKGGIKQMMSLTRQITSNIALHLP 468 Query: 219 KD 220 K+ Sbjct: 469 KN 470 >gi|323966612|gb|EGB62045.1| methyltransferase small domain-containing protein [Escherichia coli M863] gi|327251870|gb|EGE63556.1| ribosomal RNA large subunit methyltransferase G [Escherichia coli STEC_7v] Length = 378 Score = 39.3 bits (90), Expect = 0.64, Method: Compositional matrix adjust. Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 3/77 (3%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS--ERFDTLQSDWF 158 ++DLG G G + L LL ++P K V VD S A+ + N TN +R + + ++ Sbjct: 232 VVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSHLNVETNMPEALDRCEFMINNAL 291 Query: 159 SSVEGL-FDVIVSNPPY 174 S VE F+ ++ NPP+ Sbjct: 292 SGVEPFRFNAVLCNPPF 308 >gi|284164984|ref|YP_003403263.1| methyltransferase type 11 [Haloterrigena turkmenica DSM 5511] gi|284014639|gb|ADB60590.1| Methyltransferase type 11 [Haloterrigena turkmenica DSM 5511] Length = 219 Score = 39.3 bits (90), Expect = 0.64, Method: Compositional matrix adjust. Identities = 27/74 (36%), Positives = 40/74 (54%), Gaps = 8/74 (10%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE---RFDTLQSDW 157 +LDLGTGTGA+ LAL ++ + VG DIS +E A+ A G+ + T + Sbjct: 46 VLDLGTGTGAIALALAPDAD--RVVGRDISEGMMEEAEQKADDEGLENLEFEYGTFREPE 103 Query: 158 FSSVEGLFDVIVSN 171 + +G DV+ SN Sbjct: 104 Y---DGPVDVVTSN 114 >gi|227890128|ref|ZP_04007933.1| ribosomal protein L11 methyltransferase [Lactobacillus johnsonii ATCC 33200] gi|227849303|gb|EEJ59389.1| ribosomal protein L11 methyltransferase [Lactobacillus johnsonii ATCC 33200] Length = 315 Score = 39.3 bits (90), Expect = 0.64, Method: Compositional matrix adjust. Identities = 28/102 (27%), Positives = 52/102 (50%), Gaps = 8/102 (7%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 + +LD+GTG+G + +A K +G DIS +A+ AK N N + + D +++ Sbjct: 179 MSVLDVGTGSGILAIAASKLGASHV-LGTDISDEAVTAAKENIALNNI-DNIDVRKANLL 236 Query: 159 SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200 + +D+IV+N ++ D L + D D ++ +G I Sbjct: 237 KDINEKYDLIVAN------ILADILLELIPDLDNHLNENGKI 272 >gi|6322125|ref|NP_012200.1| See1p [Saccharomyces cerevisiae S288c] gi|731822|sp|P40516|SEE1_YEAST RecName: Full=N-lysine methyltransferase SEE1; AltName: Full=Secretion and early endocytosis protein 1 gi|557805|emb|CAA86159.1| unnamed protein product [Saccharomyces cerevisiae] gi|285812587|tpg|DAA08486.1| TPA: See1p [Saccharomyces cerevisiae S288c] Length = 257 Score = 39.3 bits (90), Expect = 0.64, Method: Compositional matrix adjust. Identities = 46/185 (24%), Positives = 85/185 (45%), Gaps = 22/185 (11%) Query: 69 SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128 SD+ + + LVD+ A+ RI + ++DLGTG G + L + K VG+D Sbjct: 70 SDSDAEQKMIDFLVDNIGAY---RISEN--ASVVDLGTGNGHMLFELHQTEFQGKLVGID 124 Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSS--VEGLFDVIVSNPPYIESVIVDCLGLE 186 S +++++A + A GV Q+D FS G +D++ ++ +D + L Sbjct: 125 YSEESVKLASNIAEATGVDNFISFQQADIFSGDWKPGKYDIV------LDKGTLDAISL- 177 Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246 + ++G +D + Y + V R L KDG+ + + ++V+I E+ L + Sbjct: 178 -----SGMKINGKLDVVDVYAGV---VERILKKDGIFLITSCNFTQDELVKIIETDNLKM 229 Query: 247 VNAFK 251 K Sbjct: 230 WKTIK 234 >gi|307176346|gb|EFN65957.1| N(6)-adenine-specific DNA methyltransferase 1 [Camponotus floridanus] Length = 233 Score = 39.3 bits (90), Expect = 0.64, Method: Compositional matrix adjust. Identities = 34/110 (30%), Positives = 53/110 (48%), Gaps = 9/110 (8%) Query: 72 FEPRPETELLVDSALAFSLPRIEKRDVVRI-LDLGTGTGAVCLAL-LKESPFFKG--VGV 127 + P ++ LL+D AL L I I L++G+G+G V AL + PF + + Sbjct: 17 YNPSEDSYLLID-ALEEDLQNILYATKPAICLEIGSGSGIVITALAMALKPFHNAHFIAI 75 Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFS--SVEGLFDVIVSNPPYI 175 DI+ A K ++ N V D L + V+ +DVI+ NPPY+ Sbjct: 76 DINPDACRATKRTSLINSVD--VDVLHMNLLDCIQVKNTYDVILFNPPYV 123 >gi|108760564|ref|YP_631581.1| putative methyltransferase [Myxococcus xanthus DK 1622] gi|108464444|gb|ABF89629.1| putative methyltransferase [Myxococcus xanthus DK 1622] Length = 185 Score = 39.3 bits (90), Expect = 0.64, Method: Compositional matrix adjust. Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 7/93 (7%) Query: 97 DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 D R+LDL GTGA+ L + + V VD +AL + + NA G++ + + L + Sbjct: 43 DGQRVLDLYAGTGALGLEAVSRGA-GQAVLVDQDREALTLCRENAQAVGLAGQVEVLAAP 101 Query: 157 WFSSVEGL------FDVIVSNPPYIESVIVDCL 183 ++E L F++I ++PPY V+ L Sbjct: 102 VARALETLKRRGDRFELIFADPPYAARVVETVL 134 >gi|90407141|ref|ZP_01215329.1| ribosomal protein L11 methyltransferase [Psychromonas sp. CNPT3] gi|90311717|gb|EAS39814.1| ribosomal protein L11 methyltransferase [Psychromonas sp. CNPT3] Length = 230 Score = 39.3 bits (90), Expect = 0.64, Method: Compositional matrix adjust. Identities = 33/117 (28%), Positives = 62/117 (52%), Gaps = 19/117 (16%) Query: 71 TFEPRPE---TELLVDSALAFS----------LPRIEKRDVVR--ILDLGTGTGAVCLAL 115 +++P P+ +++D LAF L +E +D+ I+D G G+G + +A Sbjct: 52 SWKPVPDENAVNVMLDPGLAFGTGTHPTTALCLTWLEGQDLRDKVIIDFGCGSGILAIAA 111 Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFSSVEGLFDVIVSN 171 LK + +G+DI +A+ ++ NA NGVS++ + L D + ++ DV+V+N Sbjct: 112 LKLG-AKRVIGIDIDPQAITASRDNATRNGVSDQLELYLADDLPNGIQA--DVLVAN 165 >gi|46136379|ref|XP_389881.1| hypothetical protein FG09705.1 [Gibberella zeae PH-1] Length = 1026 Score = 39.3 bits (90), Expect = 0.64, Method: Composition-based stats. Identities = 29/96 (30%), Positives = 42/96 (43%), Gaps = 7/96 (7%) Query: 68 SSDTFEPRPETELLVDSALAF------SLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 + D EP PE E V A + P+ E + RILD + +G L E PF Sbjct: 99 NEDAAEPAPEDEPQVTEEAANPDVADPAQPKKEYKPAFRILDALSASGLRALRYAHELPF 158 Query: 122 FKGVGV-DISCKALEIAKSNAVTNGVSERFDTLQSD 156 V D+S A + + NA NG+ ++ + Q D Sbjct: 159 VTSVKANDLSDTAADSIRMNAKHNGLDDKINVTQGD 194 >gi|310639494|ref|YP_003944252.1| methyltransferase small [Paenibacillus polymyxa SC2] gi|309244444|gb|ADO54011.1| Methyltransferase small [Paenibacillus polymyxa SC2] Length = 252 Score = 38.9 bits (89), Expect = 0.65, Method: Compositional matrix adjust. Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 5/80 (6%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 +ILDL TG G V + LL G++I + ++A+ + NG+ + + + D Sbjct: 49 KILDLCTGNGVVPI-LLTTRTKASIEGIEIQPRLADMARRSVSLNGLEDAIEIREGDLRE 107 Query: 160 SVE----GLFDVIVSNPPYI 175 V+ G +D I NPPY+ Sbjct: 108 LVQITGHGAYDAITVNPPYM 127 >gi|316933204|ref|YP_004108186.1| ribosomal L11 methyltransferase [Rhodopseudomonas palustris DX-1] gi|315600918|gb|ADU43453.1| ribosomal L11 methyltransferase [Rhodopseudomonas palustris DX-1] Length = 327 Score = 38.9 bits (89), Expect = 0.65, Method: Compositional matrix adjust. Identities = 24/79 (30%), Positives = 44/79 (55%), Gaps = 11/79 (13%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+LDLGTGTG + +A K + + DI +++ +A+ NA NGV + +Q++W + Sbjct: 188 RVLDLGTGTGVLAIAAAK-ALRHTVLATDIDKQSVAVARENARLNGVG---NLVQAEWAT 243 Query: 160 -------SVEGLFDVIVSN 171 + FD++++N Sbjct: 244 GFASPVFAAHAPFDLVLAN 262 >gi|269966937|ref|ZP_06181009.1| putative 16S rRNA m2G 1207 methyltransferase [Vibrio alginolyticus 40B] gi|269828420|gb|EEZ82682.1| putative 16S rRNA m2G 1207 methyltransferase [Vibrio alginolyticus 40B] Length = 341 Score = 38.9 bits (89), Expect = 0.65, Method: Compositional matrix adjust. Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 6/86 (6%) Query: 89 SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148 +LP++ + +LD G G G + + K +P DI+ A+ +++ NG+S Sbjct: 196 TLPKLSGK----VLDFGCGAGVLGAFMAKANPEIAIEMCDINAYAITSSQATLEANGLSG 251 Query: 149 RFDTLQSDWFSSVEGLFDVIVSNPPY 174 R SD +S + IVSNPP+ Sbjct: 252 R--VFASDIYSDTAKDYRFIVSNPPF 275 >gi|229530429|ref|ZP_04419817.1| ribosomal RNA small subunit methyltransferase C [Vibrio cholerae 12129(1)] gi|229332202|gb|EEN97690.1| ribosomal RNA small subunit methyltransferase C [Vibrio cholerae 12129(1)] gi|327483426|gb|AEA77833.1| Ribosomal RNA small subunit methyltransferase C [Vibrio cholerae LMA3894-4] Length = 340 Score = 38.9 bits (89), Expect = 0.65, Method: Compositional matrix adjust. Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 2/75 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 +++D+G G G + + K +P + DIS A+ ++ V N + SD FS Sbjct: 203 KVIDIGCGAGVLGGVMAKLNPHIELEMTDISALAIRSSQETLVANQLHGH--VYPSDMFS 260 Query: 160 SVEGLFDVIVSNPPY 174 +D IV+NPP+ Sbjct: 261 DTGHHYDYIVTNPPF 275 >gi|229000793|ref|ZP_04160297.1| Methyltransferase [Bacillus mycoides Rock3-17] gi|228758956|gb|EEM07998.1| Methyltransferase [Bacillus mycoides Rock3-17] Length = 250 Score = 38.9 bits (89), Expect = 0.65, Method: Compositional matrix adjust. Identities = 36/138 (26%), Positives = 61/138 (44%), Gaps = 18/138 (13%) Query: 48 HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTG 107 ++ + R GW DF ++ T+E E + R + DV +LD+GTG Sbjct: 10 YDKVGRSNGW-DFSKLKYVTEGATWEFYEEV-----------IERCKSSDV--LLDIGTG 55 Query: 108 TGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEGLFD 166 G L + + F +G+D S +E A+SN VS RF ++SD FD Sbjct: 56 GGENVLRIAPAALFM--IGIDNSSGMIEKAQSNLEKASVSNVRFFKMESDGLMFPHSFFD 113 Query: 167 VI-VSNPPYIESVIVDCL 183 ++ + P++ + I + Sbjct: 114 IVSCCHAPFVAAEIAKVI 131 >gi|284988732|ref|YP_003407286.1| methyltransferase small [Geodermatophilus obscurus DSM 43160] gi|284061977|gb|ADB72915.1| methyltransferase small [Geodermatophilus obscurus DSM 43160] Length = 374 Score = 38.9 bits (89), Expect = 0.65, Method: Compositional matrix adjust. Identities = 32/91 (35%), Positives = 46/91 (50%), Gaps = 2/91 (2%) Query: 85 ALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN 144 AL +L R+ D LDLG GTG + +L P + D S A+ A A N Sbjct: 219 ALLAALRRMTP-DARTALDLGCGTGVLATSLALARPGLTVLAGDQSAAAVASAAETAAAN 277 Query: 145 GVSERFDTLQSDWFSSV-EGLFDVIVSNPPY 174 GV++R ++ D SSV + D++V NPP+ Sbjct: 278 GVADRVRVVRDDAASSVPDTSVDLVVCNPPF 308 >gi|254171789|ref|ZP_04878465.1| methyltransferase [Thermococcus sp. AM4] gi|214033685|gb|EEB74511.1| methyltransferase [Thermococcus sp. AM4] Length = 210 Score = 38.9 bits (89), Expect = 0.65, Method: Compositional matrix adjust. Identities = 28/76 (36%), Positives = 37/76 (48%), Gaps = 8/76 (10%) Query: 101 ILDLGTGTG--AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 + DLGTGTG A+ LL K V+I KALE+A+ NA GV F F Sbjct: 51 VADLGTGTGVLAIGAKLLGAE---KVYAVEIDEKALEVARRNAERAGVDVEFINADVSEF 107 Query: 159 SSVEGLFDVIVSNPPY 174 + D ++ NPP+ Sbjct: 108 NE---RVDTVIMNPPF 120 >gi|193215887|ref|YP_001997086.1| type 12 methyltransferase [Chloroherpeton thalassium ATCC 35110] gi|193089364|gb|ACF14639.1| Methyltransferase type 12 [Chloroherpeton thalassium ATCC 35110] Length = 273 Score = 38.9 bits (89), Expect = 0.65, Method: Compositional matrix adjust. Identities = 30/85 (35%), Positives = 44/85 (51%), Gaps = 7/85 (8%) Query: 88 FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147 F + +++R V ++LD+ TGTG + LLK F+ V VD S L A NA +G Sbjct: 50 FFISALKERGVKKVLDVSTGTGFHSVRLLKAG--FEVVSVDGSADMLAKAFENARKHGYI 107 Query: 148 ERFDTLQSDW---FSSVEGLFDVIV 169 R T+ +DW V G +D I+ Sbjct: 108 LR--TVLADWRFLNRDVHGEYDAII 130 >gi|71894318|ref|YP_278426.1| putative DNA methylase [Mycoplasma synoviae 53] Length = 258 Score = 38.9 bits (89), Expect = 0.65, Method: Compositional matrix adjust. Identities = 22/80 (27%), Positives = 39/80 (48%), Gaps = 7/80 (8%) Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 L++GT GA+ + + S K ++I KALE+A+ N N + + + + D+ Sbjct: 50 LEIGTNNGALSIFVASRSKKLKIDALEIQAKALELAEINVKLNNLENQINLIHGDFNDFY 109 Query: 162 EG-------LFDVIVSNPPY 174 + +DVI NPP+ Sbjct: 110 KNHCNKTLPKYDVIFCNPPF 129 >gi|229089986|ref|ZP_04221238.1| Type I restriction-modification system, M subunit [Bacillus cereus Rock3-42] gi|228693333|gb|EEL47042.1| Type I restriction-modification system, M subunit [Bacillus cereus Rock3-42] Length = 530 Score = 38.9 bits (89), Expect = 0.65, Method: Compositional matrix adjust. Identities = 24/90 (26%), Positives = 41/90 (45%), Gaps = 9/90 (10%) Query: 94 EKRDVVRILDLGTGTGAVCLALLKESPFFKGV---GVDISCKALEIAKSNAVTNGVSER- 149 E + + + D G+G++ L + F V G +++ +AK N + +GV + Sbjct: 214 ESKKLFSVFDPTMGSGSLMLNIRNYINFPDSVKYHGQELNTTTYNLAKMNLILHGVDKED 273 Query: 150 -----FDTLQSDWFSSVEGLFDVIVSNPPY 174 DTL DW + FD ++ NPPY Sbjct: 274 IRLRNADTLNKDWPTEEPYTFDSVLMNPPY 303 >gi|261344929|ref|ZP_05972573.1| ribosomal protein L11 methyltransferase [Providencia rustigianii DSM 4541] gi|282567070|gb|EFB72605.1| ribosomal protein L11 methyltransferase [Providencia rustigianii DSM 4541] Length = 294 Score = 38.9 bits (89), Expect = 0.65, Method: Compositional matrix adjust. Identities = 30/97 (30%), Positives = 48/97 (49%), Gaps = 14/97 (14%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159 ++D G G+G + +A LK +G+DI +A+ ++ NA NGVSER L D Sbjct: 162 VIDFGCGSGILAIAALKLG-AAHAIGIDIDPQAITASRDNAERNGVSERLSLYLAKDQPQ 220 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL 196 ++ DV+V+N L +R+ P IS+ Sbjct: 221 DLQA--DVVVAN----------ILAGPLRELAPMISV 245 >gi|254365337|ref|ZP_04981382.1| conserved hypothetical protein [Mycobacterium tuberculosis str. Haarlem] gi|134150850|gb|EBA42895.1| conserved hypothetical protein [Mycobacterium tuberculosis str. Haarlem] Length = 250 Score = 38.9 bits (89), Expect = 0.65, Method: Compositional matrix adjust. Identities = 32/122 (26%), Positives = 48/122 (39%), Gaps = 19/122 (15%) Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV-----------------RILDLGTG 107 +T D +P E+ D +A LP D+ +LD GTG Sbjct: 1 MTAQFDPADPTRFEEMYRDDRVAHGLPAATPWDIGGPQPVVQQLVALGAIRGEVLDPGTG 60 Query: 108 TGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDV 167 G A+ + + G+D S A+E A+ NA GVS F + ++G FD Sbjct: 61 PGH--HAIYYAAKGYAATGIDGSVAAIERARDNARKAGVSVNFQVGDATTLDGLDGRFDT 118 Query: 168 IV 169 +V Sbjct: 119 VV 120 >gi|257462584|ref|ZP_05626994.1| methyltransferase [Fusobacterium sp. D12] gi|317060236|ref|ZP_07924721.1| methyltransferase [Fusobacterium sp. D12] gi|313685912|gb|EFS22747.1| methyltransferase [Fusobacterium sp. D12] Length = 393 Score = 38.9 bits (89), Expect = 0.66, Method: Compositional matrix adjust. Identities = 23/81 (28%), Positives = 40/81 (49%), Gaps = 7/81 (8%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 R LD+ + +G +A L++ + + +D AL + + N V NG F T++ D F Sbjct: 218 TRFLDVFSSSGGFSMAALRDGAK-EVIAIDKDAHALALCRENYVLNGFHSPFSTMEGDAF 276 Query: 159 SSVEGL------FDVIVSNPP 173 +E L F++I +PP Sbjct: 277 LLLETLGNRKERFNIITLDPP 297 >gi|269792808|ref|YP_003317712.1| Methyltransferase type 11 [Thermanaerovibrio acidaminovorans DSM 6589] gi|269100443|gb|ACZ19430.1| Methyltransferase type 11 [Thermanaerovibrio acidaminovorans DSM 6589] Length = 248 Score = 38.9 bits (89), Expect = 0.66, Method: Compositional matrix adjust. Identities = 31/121 (25%), Positives = 60/121 (49%), Gaps = 14/121 (11%) Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES-- 119 +R ++ F PR + VD+ L + R++ ++ L++G G + L L++ + Sbjct: 12 RLRAEQPAEGFGPR----VTVDTILLGAFVRLKGN--LKALEVGCAHGILSLMLIQRARA 65 Query: 120 --PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF----SSVEGLFDVIVSNPP 173 + VG+DI + +E+A N +G++++ + D S E FD++V NPP Sbjct: 66 LGANLRVVGIDIQPQLVEMAMRNRDLHGMTDQVRFIPMDLMELKGSWEEAPFDLVVCNPP 125 Query: 174 Y 174 Y Sbjct: 126 Y 126 >gi|228472752|ref|ZP_04057510.1| methyltransferase small [Capnocytophaga gingivalis ATCC 33624] gi|228275803|gb|EEK14569.1| methyltransferase small [Capnocytophaga gingivalis ATCC 33624] Length = 237 Score = 38.9 bits (89), Expect = 0.66, Method: Compositional matrix adjust. Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 3/77 (3%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVD---ISCKALEIAKSNAVTNGVSERFDTLQSDW 157 ILD+GTGTG + L + + P V+ +S K + S + + E F+ D+ Sbjct: 40 ILDIGTGTGVLSLMMAQRFPLSHIHAVELHPLSAKECRLNVSLSPWHQAVEVFEMDIRDF 99 Query: 158 FSSVEGLFDVIVSNPPY 174 S+ +D+I+SNPP+ Sbjct: 100 ASTSATAYDLIISNPPF 116 >gi|145347856|ref|XP_001418376.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144578605|gb|ABO96669.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 865 Score = 38.9 bits (89), Expect = 0.66, Method: Composition-based stats. Identities = 35/116 (30%), Positives = 61/116 (52%), Gaps = 14/116 (12%) Query: 78 TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137 T LL+ S L P IE++ +++LD +G G + A+ ++ + +D ALE A Sbjct: 702 TTLLLRSVL----PTIERKSKLKVLDYCSGAGQIAAAVRAKAKKSRLWLLDADACALEAA 757 Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEG---LFDVIVSNPPYIESVIVDCLGLEVRDF 190 K N +S+ + + SD + ++E FD+I+SNPP + VD + +R+F Sbjct: 758 KRN-----LSDDVEFILSDGWRALEKSDRAFDLILSNPPVHLGLAVDF--VPIREF 806 >gi|126642861|ref|YP_001085845.1| ribosomal RNA small subunit methyltransferase C [Acinetobacter baumannii ATCC 17978] Length = 246 Score = 38.9 bits (89), Expect = 0.66, Method: Compositional matrix adjust. Identities = 34/135 (25%), Positives = 54/135 (40%), Gaps = 3/135 (2%) Query: 47 KHESIHRILGWRDFYNVRLTLSSDTFEPRPE--TELLVDSALAFSLPRIEKRDVVRILDL 104 K E I + W Y V++ T P ++ +D A LP + + RI D Sbjct: 51 KTEKIKPLESWLKTYTVQVNEQELTICALPGVFSQTHLDVGTAVLLPYLNQVKSGRIADF 110 Query: 105 GTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV-SERFDTLQSDWFSSVEG 163 G G G + L K + +DI AL+ + NG+ S++ + Sbjct: 111 GCGAGIISCYLAKANSSNIIHALDIDAFALQSTEMTFSRNGIGSDQLRLQPVTGIADAPT 170 Query: 164 LFDVIVSNPPYIESV 178 D IVSNPP+ + + Sbjct: 171 ELDAIVSNPPFHQGI 185 >gi|58337232|ref|YP_193817.1| ribosomal protein L11 methyltransferase [Lactobacillus acidophilus NCFM] gi|227903815|ref|ZP_04021620.1| ribosomal protein L11 methyltransferase [Lactobacillus acidophilus ATCC 4796] gi|81311476|sp|Q5FKI8|PRMA_LACAC RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11 Mtase gi|58254549|gb|AAV42786.1| methyltransferase [Lactobacillus acidophilus NCFM] gi|227868702|gb|EEJ76123.1| ribosomal protein L11 methyltransferase [Lactobacillus acidophilus ATCC 4796] Length = 314 Score = 38.9 bits (89), Expect = 0.66, Method: Compositional matrix adjust. Identities = 42/175 (24%), Positives = 80/175 (45%), Gaps = 34/175 (19%) Query: 56 GWRDFYNV-------RLTLSSDTFEPRPETELLV--DSALAF----------SLPRIEKR 96 W+ +Y+V + + ++P + L+ D LAF ++ IE+ Sbjct: 114 AWQKYYHVIDFSRHLAIVPEWEDYQPAFSDQQLIKLDPGLAFGTGNHKTTQLAMMGIERA 173 Query: 97 DV--VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154 V + ++D+GTG+G + +A K + DIS +++ AK N+ N ++ + Sbjct: 174 MVKPMSVVDVGTGSGILAIAASKLGAT-NVLATDISDESMTAAKQNSALNNLT-NIKVQK 231 Query: 155 SDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG-----GIDGLS 204 + + VEG FD+IV+N + +++D + D ++ DG GID L Sbjct: 232 TSLLAGVEGKFDIIVAN--ILAEILLDL----IPQMDAHLNKDGQVIFSGIDYLQ 280 >gi|54026812|ref|YP_121054.1| hypothetical protein nfa48380 [Nocardia farcinica IFM 10152] gi|54018320|dbj|BAD59690.1| hypothetical protein [Nocardia farcinica IFM 10152] Length = 383 Score = 38.9 bits (89), Expect = 0.66, Method: Compositional matrix adjust. Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 14/108 (12%) Query: 81 LVDSALAFSLPRIE-------------KRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 +V AFS PR++ K D +DLG GTG + +AL K P + VG Sbjct: 203 VVAHGAAFSGPRLDIGTRFLLEHLKLMKPDARDAIDLGCGTGILAVALAKARPGLRVVGT 262 Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPY 174 D S A+ A++ A N V++R ++ D SS + D+++ NPP+ Sbjct: 263 DQSAAAVASAEATAAANAVADRVRVVRDDAMSSAPDNSADLVLCNPPF 310 >gi|145220570|ref|YP_001131279.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Prosthecochloris vibrioformis DSM 265] gi|145206734|gb|ABP37777.1| 23S rRNA m(5)U-1939 methyltransferase [Chlorobium phaeovibrioides DSM 265] Length = 484 Score = 38.9 bits (89), Expect = 0.66, Method: Compositional matrix adjust. Identities = 26/81 (32%), Positives = 45/81 (55%), Gaps = 9/81 (11%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER--FDTLQSDW 157 R+ DL GTG + L L + + + +G+++ +++ A+SNA +NG+ F T D Sbjct: 330 RVYDLYCGTGTITLWLARHAE--RAIGLEVVESSIQDARSNAESNGIGNAYFFQTDLKDL 387 Query: 158 FSSVE-----GLFDVIVSNPP 173 + +E G DVIV++PP Sbjct: 388 GAMMERLEEHGRPDVIVTDPP 408 >gi|312881561|ref|ZP_07741342.1| 16S RNA G1207 methylase RsmC [Vibrio caribbenthicus ATCC BAA-2122] gi|309370764|gb|EFP98235.1| 16S RNA G1207 methylase RsmC [Vibrio caribbenthicus ATCC BAA-2122] Length = 377 Score = 38.9 bits (89), Expect = 0.66, Method: Compositional matrix adjust. Identities = 41/157 (26%), Positives = 70/157 (44%), Gaps = 14/157 (8%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER-FDTLQSD 156 + ++DLG G G + + + + +P K VD S A+ AK N N E D + ++ Sbjct: 232 IKHVIDLGCGNGVLAIKMARLNPGIKLTCVDESFMAIASAKRNLAQNLTEEHDIDLIANN 291 Query: 157 WFSSVE-GLFDVIVSNPPY-IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214 + DVI+ NPP+ + I D + ++ +I GG + + G + Sbjct: 292 CLDDLNIKNVDVILCNPPFHQQQTITDHIAWQMFCDAKQILKPGG-------QLLVIG-N 343 Query: 215 RHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK 251 RHL DG S G K +V + ++K ++ A K Sbjct: 344 RHLGYDGKLSRLFG---KRNVSVVASNKKFVILQASK 377 >gi|259501367|ref|ZP_05744269.1| methyltransferase domain protein [Lactobacillus iners DSM 13335] gi|302190912|ref|ZP_07267166.1| Methyltransferase small [Lactobacillus iners AB-1] gi|259167220|gb|EEW51715.1| methyltransferase domain protein [Lactobacillus iners DSM 13335] Length = 204 Score = 38.9 bits (89), Expect = 0.66, Method: Compositional matrix adjust. Identities = 25/75 (33%), Positives = 42/75 (56%), Gaps = 3/75 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 ILD+GTG G + L K P +D++ +AL +AK NA N + + + S+ + S Sbjct: 65 ILDVGTGYGPLGLFAAKLWPKSHVTMIDVNERALALAKRNAQLNEI-DNVNIFSSECYRS 123 Query: 161 V--EGLFDVIVSNPP 173 + + F +I++NPP Sbjct: 124 LDEQEQFGLILTNPP 138 >gi|195927220|pdb|2JJQ|A Chain A, The Crystal Structure Of Pyrococcus Abyssi Trna (Uracil-54, C5)-Methyltransferase In Complex With S-Adenosyl-L- Homocysteine Length = 425 Score = 38.9 bits (89), Expect = 0.66, Method: Compositional matrix adjust. Identities = 42/151 (27%), Positives = 69/151 (45%), Gaps = 9/151 (5%) Query: 25 DPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDS 84 DP + D ++ N + + I R G ++F +R L + P + +S Sbjct: 219 DPTNYFDFDSIYWSVNRSKSDVSYGDIERFWG-KEF--IRERLDDVDYLIHPNSFFQTNS 275 Query: 85 ALAFSLPRI--EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142 A +L R E + +ILD+ +G G + L K F G D + A+E+A+ N Sbjct: 276 YQAVNLVRKVSELVEGEKILDMYSGVGTFGIYLAKRG--FNVKGFDSNEFAIEMARRNVE 333 Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173 N V F+ + SD SV+G FD ++ +PP Sbjct: 334 INNVDAEFE-VASDREVSVKG-FDTVIVDPP 362 >gi|169350757|ref|ZP_02867695.1| hypothetical protein CLOSPI_01530 [Clostridium spiroforme DSM 1552] gi|169292620|gb|EDS74753.1| hypothetical protein CLOSPI_01530 [Clostridium spiroforme DSM 1552] Length = 546 Score = 38.9 bits (89), Expect = 0.66, Method: Compositional matrix adjust. Identities = 29/112 (25%), Positives = 54/112 (48%), Gaps = 13/112 (11%) Query: 72 FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP---FFKGVGVD 128 + P+ +++L A+A E + + + D G+G++ L K S K G + Sbjct: 211 YTPQAVSKILTKIAIAGQ----ENKKGLSVYDPCMGSGSLLLNAKKYSKDPRNIKYYGQE 266 Query: 129 ISCKALEIAKSNAVTNGV---SERF---DTLQSDWFSSVEGLFDVIVSNPPY 174 + +A+ N +GV +++ DTL +DW + E FD+++ NPPY Sbjct: 267 LMTSTYNLARMNMFLHGVVPENQKLRNGDTLDADWPTDEETNFDMVLMNPPY 318 >gi|317123571|ref|YP_004097683.1| methyltransferase type 11 [Intrasporangium calvum DSM 43043] gi|315587659|gb|ADU46956.1| Methyltransferase type 11 [Intrasporangium calvum DSM 43043] Length = 251 Score = 38.9 bits (89), Expect = 0.67, Method: Compositional matrix adjust. Identities = 25/84 (29%), Positives = 46/84 (54%), Gaps = 10/84 (11%) Query: 101 ILDLGTGTGA-VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 +LDLG+G G V ++ + +P K +G+D++ + LE+A++NA G+ D Sbjct: 84 VLDLGSGAGGDVLISAKRVAPGGKAIGIDMTPEMLELARANAREAGI---------DNAE 134 Query: 160 SVEGLFDVIVSNPPYIESVIVDCL 183 VEG + I + ++ VI +C+ Sbjct: 135 FVEGYLEHIPLDEDSVDVVISNCV 158 >gi|226306448|ref|YP_002766408.1| hypothetical protein RER_29610 [Rhodococcus erythropolis PR4] gi|226185565|dbj|BAH33669.1| conserved hypothetical protein [Rhodococcus erythropolis PR4] Length = 474 Score = 38.9 bits (89), Expect = 0.67, Method: Compositional matrix adjust. Identities = 32/89 (35%), Positives = 47/89 (52%), Gaps = 11/89 (12%) Query: 74 PRPETELL---VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130 PRP+ L VD+ LA +L R+ R +V D+G G G + AL+ + F K VGVD+S Sbjct: 267 PRPDPPLARLRVDAVLA-TLQRLHVRTIV---DIGCGEGKLLEALMPHAQFDKLVGVDVS 322 Query: 131 CKALEIA----KSNAVTNGVSERFDTLQS 155 + L A K +++ ER +QS Sbjct: 323 ARELTRAQRRLKFTEMSDVQRERVSLMQS 351 >gi|323481373|gb|ADX80812.1| Type I restriction-modification system methylation subunit [Enterococcus faecalis 62] Length = 343 Score = 38.9 bits (89), Expect = 0.67, Method: Compositional matrix adjust. Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 9/90 (10%) Query: 94 EKRDVVRILDLGTGTGAVCLAL---LKESPFFKGVGVDISCKALEIAKSNAVTNGV-SER 149 ++R + D G+G++ L + L K G +++ +AK N + +GV +E Sbjct: 215 KERRFFSVFDPTMGSGSLMLNVRNYLTHPDNVKYHGQELNTTTYNLAKMNLILHGVDAEE 274 Query: 150 F-----DTLQSDWFSSVEGLFDVIVSNPPY 174 DTL DW + FD +V NPPY Sbjct: 275 MNLRNGDTLNKDWPTDEPYTFDAVVMNPPY 304 >gi|294670650|ref|ZP_06735526.1| hypothetical protein NEIELOOT_02373 [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291307620|gb|EFE48863.1| hypothetical protein NEIELOOT_02373 [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 295 Score = 38.9 bits (89), Expect = 0.67, Method: Compositional matrix adjust. Identities = 28/74 (37%), Positives = 38/74 (51%), Gaps = 11/74 (14%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDW 157 +LD G G+G + +A LK VGVDI +A+ NAV N V +F D L Sbjct: 167 VLDYGCGSGILTIAALKLG-AASAVGVDIDPQAIAAGTGNAVQNRVETKFYLPDELP--- 222 Query: 158 FSSVEGLFDVIVSN 171 +G FDV+V+N Sbjct: 223 ----DGQFDVVVAN 232 >gi|195380820|ref|XP_002049159.1| GJ21427 [Drosophila virilis] gi|194143956|gb|EDW60352.1| GJ21427 [Drosophila virilis] Length = 215 Score = 38.9 bits (89), Expect = 0.67, Method: Compositional matrix adjust. Identities = 22/56 (39%), Positives = 31/56 (55%), Gaps = 1/56 (1%) Query: 96 RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151 + R+LDLG G G +AL E F + GVD S KA+E+AK A ++ +D Sbjct: 56 KQTARVLDLGCGNGMFLIALANEG-FTQLTGVDYSPKAIELAKGIAKDQALNISYD 110 >gi|194364414|ref|YP_002027024.1| type 11 methyltransferase [Stenotrophomonas maltophilia R551-3] gi|194347218|gb|ACF50341.1| Methyltransferase type 11 [Stenotrophomonas maltophilia R551-3] Length = 275 Score = 38.9 bits (89), Expect = 0.67, Method: Compositional matrix adjust. Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 1/66 (1%) Query: 92 RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN-AVTNGVSERF 150 +I+ R+L++G+G GA LL+ P GVD+S L+ A+ N A T S+R+ Sbjct: 36 QIDYSGARRLLEVGSGVGAQTEILLRRFPELHVTGVDLSETQLQTARENLARTPWCSDRY 95 Query: 151 DTLQSD 156 Q+D Sbjct: 96 TLQQAD 101 >gi|15640643|ref|NP_230272.1| hypothetical protein VC0623 [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121587955|ref|ZP_01677709.1| conserved hypothetical protein [Vibrio cholerae 2740-80] gi|121728278|ref|ZP_01681310.1| conserved hypothetical protein [Vibrio cholerae V52] gi|147673438|ref|YP_001216116.1| hypothetical protein VC0395_A0151 [Vibrio cholerae O395] gi|153818927|ref|ZP_01971594.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457] gi|153822984|ref|ZP_01975651.1| conserved hypothetical protein [Vibrio cholerae B33] gi|227080804|ref|YP_002809355.1| Ribosomal RNA small subunit methyltransferase C [Vibrio cholerae M66-2] gi|229505754|ref|ZP_04395264.1| ribosomal RNA small subunit methyltransferase C [Vibrio cholerae BX 330286] gi|229509212|ref|ZP_04398697.1| ribosomal RNA small subunit methyltransferase C [Vibrio cholerae B33] gi|229519578|ref|ZP_04409021.1| 16S RNA G1207 methylase RsmC [Vibrio cholerae RC9] gi|229608865|ref|YP_002879513.1| ribosomal RNA small subunit methyltransferase C [Vibrio cholerae MJ-1236] gi|254850856|ref|ZP_05240206.1| conserved hypothetical protein [Vibrio cholerae MO10] gi|255744159|ref|ZP_05418112.1| ribosomal RNA small subunit methyltransferase C [Vibrio cholera CIRS 101] gi|262155733|ref|ZP_06028857.1| ribosomal RNA small subunit methyltransferase C [Vibrio cholerae INDRE 91/1] gi|262169925|ref|ZP_06037615.1| ribosomal RNA small subunit methyltransferase C [Vibrio cholerae RC27] gi|298500740|ref|ZP_07010543.1| conserved hypothetical protein [Vibrio cholerae MAK 757] gi|81858155|sp|Q9KUA0|RSMC_VIBCH RecName: Full=Ribosomal RNA small subunit methyltransferase C; AltName: Full=16S rRNA m2G1207 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rsmC gi|226712996|sp|A5F942|RSMC_VIBC3 RecName: Full=Ribosomal RNA small subunit methyltransferase C; AltName: Full=16S rRNA m2G1207 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rsmC gi|9655057|gb|AAF93789.1| conserved hypothetical protein [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121547802|gb|EAX57890.1| conserved hypothetical protein [Vibrio cholerae 2740-80] gi|121629472|gb|EAX61899.1| conserved hypothetical protein [Vibrio cholerae V52] gi|126510544|gb|EAZ73138.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457] gi|126519491|gb|EAZ76714.1| conserved hypothetical protein [Vibrio cholerae B33] gi|146315321|gb|ABQ19860.1| conserved hypothetical protein [Vibrio cholerae O395] gi|227008692|gb|ACP04904.1| Ribosomal RNA small subunit methyltransferase C [Vibrio cholerae M66-2] gi|227012448|gb|ACP08658.1| Ribosomal RNA small subunit methyltransferase C [Vibrio cholerae O395] gi|229344267|gb|EEO09242.1| 16S RNA G1207 methylase RsmC [Vibrio cholerae RC9] gi|229353784|gb|EEO18720.1| ribosomal RNA small subunit methyltransferase C [Vibrio cholerae B33] gi|229357977|gb|EEO22894.1| ribosomal RNA small subunit methyltransferase C [Vibrio cholerae BX 330286] gi|229371520|gb|ACQ61943.1| ribosomal RNA small subunit methyltransferase C [Vibrio cholerae MJ-1236] gi|254846561|gb|EET24975.1| conserved hypothetical protein [Vibrio cholerae MO10] gi|255738099|gb|EET93491.1| ribosomal RNA small subunit methyltransferase C [Vibrio cholera CIRS 101] gi|262021659|gb|EEY40370.1| ribosomal RNA small subunit methyltransferase C [Vibrio cholerae RC27] gi|262030444|gb|EEY49084.1| ribosomal RNA small subunit methyltransferase C [Vibrio cholerae INDRE 91/1] gi|297540521|gb|EFH76579.1| conserved hypothetical protein [Vibrio cholerae MAK 757] Length = 340 Score = 38.9 bits (89), Expect = 0.67, Method: Compositional matrix adjust. Identities = 21/75 (28%), Positives = 38/75 (50%), Gaps = 2/75 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 +++D+G+G G + + K +P + DIS A+ ++ V N + SD FS Sbjct: 203 KVIDIGSGAGVLGCVMAKLNPHIELEMTDISALAIRSSQETLVANQLHGH--VYPSDMFS 260 Query: 160 SVEGLFDVIVSNPPY 174 ++ IV+NPP+ Sbjct: 261 DTGHHYNYIVTNPPF 275 >gi|330835225|ref|YP_004409953.1| methyltransferase [Metallosphaera cuprina Ar-4] gi|329567364|gb|AEB95469.1| methyltransferase [Metallosphaera cuprina Ar-4] Length = 191 Score = 38.9 bits (89), Expect = 0.68, Method: Compositional matrix adjust. Identities = 38/120 (31%), Positives = 56/120 (46%), Gaps = 28/120 (23%) Query: 74 PRPETEL---LVDSALAFSL-------PRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 P+P+ EL L S +A ++ IE + R+ DLG GTG CL + Sbjct: 8 PKPKWELEQYLTPSYIASTIVWTAYVRGEIENK---RVADLGCGTGRFCLGI-------S 57 Query: 124 GVG-----VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESV 178 +G VDI +LE+AKS T F +++D +S G FD + NPP+ +V Sbjct: 58 ALGGHCTCVDIDRDSLEVAKSTLRTIDAEAEF--VEAD-CNSFNGRFDTAIQNPPFGNAV 114 >gi|258615581|ref|ZP_05713351.1| hypothetical protein EfaeD_07707 [Enterococcus faecium DO] Length = 411 Score = 38.9 bits (89), Expect = 0.68, Method: Compositional matrix adjust. Identities = 29/107 (27%), Positives = 48/107 (44%), Gaps = 9/107 (8%) Query: 94 EKRDVVRILDLGTGTGAVCLAL---LKESPFFKGVGVDISCKALEIAKSNAVTNGV-SER 149 ++R + D G+G++ L + L K G +++ +AK N + +GV +E Sbjct: 96 KERRFFSVFDPTMGSGSLMLNVRNYLTHPDNVKYHGQELNTTTYNLAKMNLILHGVDAEE 155 Query: 150 F-----DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFD 191 DTL DW + FD +V NPPY + D L+ F+ Sbjct: 156 MNLRNGDTLNKDWPTDEPYTFDAVVMNPPYSANWSADTTFLDDSRFN 202 >gi|302887342|ref|XP_003042559.1| hypothetical protein NECHADRAFT_81086 [Nectria haematococca mpVI 77-13-4] gi|256723471|gb|EEU36846.1| hypothetical protein NECHADRAFT_81086 [Nectria haematococca mpVI 77-13-4] Length = 333 Score = 38.9 bits (89), Expect = 0.68, Method: Compositional matrix adjust. Identities = 34/120 (28%), Positives = 48/120 (40%), Gaps = 17/120 (14%) Query: 80 LLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKS 139 L D+ L S P + V R+LD+GTGTG + E P +GVD+S Sbjct: 81 LTFDNKLGLSPPNLPGSKVKRVLDVGTGTGIWAIDFGDEHPDATVIGVDLSPIQPSFVPP 140 Query: 140 NAVTN--------GVSERFDTLQS--------DWFSSVEGLFDVIVSNPPYIESVIVDCL 183 N SE FD + S +W S +E +F + Y+E VD + Sbjct: 141 NVQFEIDDIDEEWTYSEPFDYIHSRFMNFSVQNWQSYLEKIFKNLAPG-GYVELQDVDVI 199 >gi|228991705|ref|ZP_04151645.1| Methyltransferase type 11 [Bacillus pseudomycoides DSM 12442] gi|228997806|ref|ZP_04157410.1| Methyltransferase type 11 [Bacillus mycoides Rock3-17] gi|229005345|ref|ZP_04163059.1| Methyltransferase type 11 [Bacillus mycoides Rock1-4] gi|228755875|gb|EEM05206.1| Methyltransferase type 11 [Bacillus mycoides Rock1-4] gi|228761938|gb|EEM10880.1| Methyltransferase type 11 [Bacillus mycoides Rock3-17] gi|228768028|gb|EEM16651.1| Methyltransferase type 11 [Bacillus pseudomycoides DSM 12442] Length = 264 Score = 38.9 bits (89), Expect = 0.68, Method: Compositional matrix adjust. Identities = 23/61 (37%), Positives = 36/61 (59%), Gaps = 4/61 (6%) Query: 86 LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG-VGVDISCKALEIAKSNAVTN 144 L + + +++ R +R+LD+ TG G V L +P FK V +D++ K LE AK+ TN Sbjct: 33 LQYVVQQVKNRKNIRLLDIATGGGHVANLL---APIFKEVVALDLTEKMLEKAKAFIQTN 89 Query: 145 G 145 G Sbjct: 90 G 90 >gi|221121476|ref|XP_002156231.1| PREDICTED: similar to predicted protein [Hydra magnipapillata] Length = 212 Score = 38.9 bits (89), Expect = 0.68, Method: Compositional matrix adjust. Identities = 30/108 (27%), Positives = 54/108 (50%), Gaps = 6/108 (5%) Query: 72 FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVC--LALLKESPFFKGVGVDI 129 +EP +T LL+D+ L ++ + + L++G+G+G V LA + E+ F + DI Sbjct: 19 YEPSEDTFLLIDT-LEKEQHILKSQKPLICLEVGSGSGVVITFLAKITENKSFY-IATDI 76 Query: 130 SCKALEIAKSNAVTNGV--SERFDTLQSDWFSSVEGLFDVIVSNPPYI 175 + A +K N V D+ S ++G D+++ NPPY+ Sbjct: 77 NLNACICSKKTGHENNVYVETHCDSFASSMMQRLQGNIDILLFNPPYV 124 >gi|183597992|ref|ZP_02959485.1| hypothetical protein PROSTU_01343 [Providencia stuartii ATCC 25827] gi|188022766|gb|EDU60806.1| hypothetical protein PROSTU_01343 [Providencia stuartii ATCC 25827] Length = 294 Score = 38.9 bits (89), Expect = 0.68, Method: Compositional matrix adjust. Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 14/97 (14%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159 ++D G G+G + +A LK + +G+DI +A+ ++ NA NGVSER L D Sbjct: 162 VIDFGCGSGILAIAALKLG-AAQAIGIDIDPQAIIASRDNAERNGVSERLSLYLPKDQPK 220 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL 196 ++ DV+V+N L +R+ P IS+ Sbjct: 221 ELQA--DVVVAN----------ILAGPLRELAPMISV 245 >gi|296110699|ref|YP_003621080.1| hypothetical protein LKI_02840 [Leuconostoc kimchii IMSNU 11154] gi|295832230|gb|ADG40111.1| hypothetical protein LKI_02840 [Leuconostoc kimchii IMSNU 11154] Length = 514 Score = 38.9 bits (89), Expect = 0.69, Method: Compositional matrix adjust. Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 9/83 (10%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGV---GVDISCKALEIAKSNAVTNGVS------ERFD 151 + D G+G++ L + + K + G +++ +A+ N + +GVS D Sbjct: 221 VYDPAMGSGSLLLTVAGQVTGNKTIAYHGQELNTTTFNLARMNLMLHGVSFEDIHVRNGD 280 Query: 152 TLQSDWFSSVEGLFDVIVSNPPY 174 TL +DW + FD +V NPPY Sbjct: 281 TLDNDWPAQEPYQFDAVVMNPPY 303 >gi|332969290|gb|EGK08317.1| type 12 methyltransferase [Desmospora sp. 8437] Length = 213 Score = 38.9 bits (89), Expect = 0.69, Method: Compositional matrix adjust. Identities = 18/46 (39%), Positives = 32/46 (69%) Query: 93 IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAK 138 ++K VR++DLG G G + L+++ F + +G+D+S +ALEIA+ Sbjct: 8 LKKDGAVRVMDLGCGEGRLLKRLVRDKQFQEVLGMDVSPRALEIAE 53 >gi|323492070|ref|ZP_08097232.1| ribosomal protein L11 methyltransferase [Vibrio brasiliensis LMG 20546] gi|323313631|gb|EGA66733.1| ribosomal protein L11 methyltransferase [Vibrio brasiliensis LMG 20546] Length = 295 Score = 38.9 bits (89), Expect = 0.69, Method: Compositional matrix adjust. Identities = 34/112 (30%), Positives = 56/112 (50%), Gaps = 17/112 (15%) Query: 74 PRPET-ELLVDSALAFS----------LPRIEKRDVV--RILDLGTGTGAVCLALLKESP 120 P P+ +++D LAF L +E D+ ++D G G+G + +A +K Sbjct: 123 PEPDAVNVMLDPGLAFGTGTHPTTALCLEWLEGLDLSGKTVIDFGCGSGILAIAAIKLG- 181 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF-DVIVSN 171 K +G+DI +AL +K NA NGV+++ + EGL DV+V+N Sbjct: 182 AEKVIGIDIDPQALLASKDNAERNGVADQLEVFLPQ--DQPEGLIADVVVAN 231 >gi|269956054|ref|YP_003325843.1| methyltransferase small [Xylanimonas cellulosilytica DSM 15894] gi|269304735|gb|ACZ30285.1| methyltransferase small [Xylanimonas cellulosilytica DSM 15894] Length = 210 Score = 38.9 bits (89), Expect = 0.69, Method: Compositional matrix adjust. Identities = 32/94 (34%), Positives = 45/94 (47%), Gaps = 4/94 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LDLG G G + L L SP VD+S +AL++ + NA G++ T D Sbjct: 68 LLDLGCGWGPIALTLATRSPGATVWAVDVSERALDLTRRNAERLGLAN-VRTATPD-AVP 125 Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194 + F I SNPP V D L +R + PR+ Sbjct: 126 ADVRFSAIWSNPPI--RVGKDVLHGMLRTWLPRL 157 >gi|195927327|pdb|2VS1|A Chain A, The Crystal Structure Of Pyrococcus Abyssi Trna (Uracil-54, C5)-Methyltransferase In Complex With S-Adenosyl-L- Homocysteine Length = 425 Score = 38.9 bits (89), Expect = 0.69, Method: Compositional matrix adjust. Identities = 42/151 (27%), Positives = 69/151 (45%), Gaps = 9/151 (5%) Query: 25 DPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDS 84 DP + D ++ N + + I R G ++F +R L + P + +S Sbjct: 219 DPTNYFDFDSIYWSVNRSKSDVSYGDIERFWG-KEF--IRERLDDVDYLIHPNSFFQTNS 275 Query: 85 ALAFSLPRI--EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142 A +L R E + +ILD+ +G G + L K F G D + A+E+A+ N Sbjct: 276 YQAVNLVRKVSELVEGEKILDMYSGVGTFGIYLAKRG--FNVKGFDSNEFAIEMARRNVE 333 Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173 N V F+ + SD SV+G FD ++ +PP Sbjct: 334 INNVDAEFE-VASDREVSVKG-FDTVIVDPP 362 >gi|188587917|ref|YP_001922499.1| SAM-dependent methyltransferase [Clostridium botulinum E3 str. Alaska E43] gi|188498198|gb|ACD51334.1| SAM-dependent methyltransferase [Clostridium botulinum E3 str. Alaska E43] Length = 250 Score = 38.9 bits (89), Expect = 0.69, Method: Compositional matrix adjust. Identities = 22/80 (27%), Positives = 43/80 (53%), Gaps = 6/80 (7%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R++DL TGTG + L + + G++I + +++A+ + N + ++ ++ D Sbjct: 52 RVIDLCTGTGIIPFLLYGKYNPKEIYGLEIQEEMVKMAEKSVKLNALEDKITIIKED-LK 110 Query: 160 SVEGL-----FDVIVSNPPY 174 ++E L FDV+ NPPY Sbjct: 111 NIEYLKKMDKFDVVTVNPPY 130 >gi|14521283|ref|NP_126758.1| putative RNA methyltransferase [Pyrococcus abyssi GE5] gi|50401701|sp|Q9UZR7|Y1078_PYRAB RecName: Full=Uncharacterized RNA methyltransferase PYRAB10780 gi|5458501|emb|CAB49989.1| RNA methyltransferase, putative [Pyrococcus abyssi GE5] Length = 405 Score = 38.9 bits (89), Expect = 0.69, Method: Compositional matrix adjust. Identities = 42/151 (27%), Positives = 69/151 (45%), Gaps = 9/151 (5%) Query: 25 DPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDS 84 DP + D ++ N + + I R G ++F +R L + P + +S Sbjct: 199 DPTNYFDFDSIYWSVNRSKSDVSYGDIERFWG-KEF--IRERLDDVDYLIHPNSFFQTNS 255 Query: 85 ALAFSLPRI--EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142 A +L R E + +ILD+ +G G + L K F G D + A+E+A+ N Sbjct: 256 YQAVNLVRKVSELVEGEKILDMYSGVGTFGIYLAKRG--FNVKGFDSNEFAIEMARRNVE 313 Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173 N V F+ + SD SV+G FD ++ +PP Sbjct: 314 INNVDAEFE-VASDREVSVKG-FDTVIVDPP 342 >gi|298207515|ref|YP_003715694.1| hypothetical protein CA2559_04650 [Croceibacter atlanticus HTCC2559] gi|83850151|gb|EAP88019.1| hypothetical protein CA2559_04650 [Croceibacter atlanticus HTCC2559] Length = 236 Score = 38.9 bits (89), Expect = 0.69, Method: Compositional matrix adjust. Identities = 36/153 (23%), Positives = 65/153 (42%), Gaps = 20/153 (13%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 ILD+G GTG + L + + S + V++ A E N + +R + + Sbjct: 38 ILDVGAGTGVIALQMAQRSNAEQIDAVEVDGDAYEQTVENFENSDWGDRLFCYHASFIQL 97 Query: 161 VEGL-----FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI---DGLSHYRTIADG 212 VE L +D+I+ NPP+ D+ S D L ++ + G Sbjct: 98 VEELEGDEFYDLIICNPPFFS-----------EDYKSNTSQRDQARFQDALP-FQDLISG 145 Query: 213 VSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245 VS+ L+ +G SV I ++++ + I + L+ Sbjct: 146 VSKLLSPNGQFSVIIPFSEEQKFIEIAKEHNLY 178 >gi|119384686|ref|YP_915742.1| SAM-dependent methyltransferase [Paracoccus denitrificans PD1222] gi|119374453|gb|ABL70046.1| SAM-dependent methyltransferase [Paracoccus denitrificans PD1222] Length = 398 Score = 38.9 bits (89), Expect = 0.69, Method: Compositional matrix adjust. Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 6/53 (11%) Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPP 173 VD S ALE+A+ A G R T Q D F +E L FD+++ +PP Sbjct: 251 VDGSAAALELARGGARAMGAEARLTTRQGDAFEQMEALAAEGAQFDLVICDPP 303 >gi|88860284|ref|ZP_01134922.1| putative ribosomal RNA small subunit methyltransferase C [Pseudoalteromonas tunicata D2] gi|88817482|gb|EAR27299.1| putative ribosomal RNA small subunit methyltransferase C [Pseudoalteromonas tunicata D2] Length = 343 Score = 38.9 bits (89), Expect = 0.70, Method: Compositional matrix adjust. Identities = 25/93 (26%), Positives = 44/93 (47%), Gaps = 2/93 (2%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 +D A L + D +LD G G G + L K++P + + +D+S A + Sbjct: 188 LDHGTALLLKTMTTPDAGTVLDFGCGAGIISAYLGKKNPKLEFICIDVSAFATTATELTL 247 Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174 N + + TL S+ S ++ + IV+NPP+ Sbjct: 248 AANNI--KGVTLLSNGLSELKDKVNHIVTNPPF 278 >gi|325001248|ref|ZP_08122360.1| ubiquinone/menaquinone biosynthesis methylase [Pseudonocardia sp. P1] Length = 130 Score = 38.9 bits (89), Expect = 0.70, Method: Compositional matrix adjust. Identities = 29/82 (35%), Positives = 37/82 (45%), Gaps = 2/82 (2%) Query: 81 LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140 L SA LPR +R+LD G GTGA ALL +P + V VD S LE A++ Sbjct: 50 LRASAARMRLPRDGA--GLRLLDAGCGTGASTAALLGVAPRAEIVAVDASAGMLERARTK 107 Query: 141 AVTNGVSERFDTLQSDWFSSVE 162 V+ T W S+ Sbjct: 108 PWPGSVTFVHSTADDHWPSTAS 129 >gi|317061082|ref|ZP_07925567.1| ribosomal protein L11 methyltransferase [Fusobacterium sp. D12] gi|313686758|gb|EFS23593.1| ribosomal protein L11 methyltransferase [Fusobacterium sp. D12] Length = 313 Score = 38.9 bits (89), Expect = 0.70, Method: Compositional matrix adjust. Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 3/73 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV-SERFDTLQSDWFS 159 +LD+GTG+G + + K F GVDI A+E+A N N V E+++ L + Sbjct: 179 VLDVGTGSGILMIVAEKLGARFV-CGVDIDELAVEVAHENLELNAVPKEKYEVLHGNLIE 237 Query: 160 SVEGL-FDVIVSN 171 +E +DV+V+N Sbjct: 238 KIEAKSYDVVVAN 250 >gi|307941570|ref|ZP_07656925.1| methyltransferase type 11 [Roseibium sp. TrichSKD4] gi|307775178|gb|EFO34384.1| methyltransferase type 11 [Roseibium sp. TrichSKD4] Length = 217 Score = 38.9 bits (89), Expect = 0.70, Method: Compositional matrix adjust. Identities = 21/56 (37%), Positives = 29/56 (51%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 +L+LG GTG +A K P + G+DIS + L A+ N G S R +Q D Sbjct: 48 VLELGCGTGRNLIAAAKRYPSAQFFGLDISDQMLATARKNIEKAGYSNRIKLIQGD 103 >gi|299535232|ref|ZP_07048556.1| putative RNA methyltransferase [Lysinibacillus fusiformis ZC1] gi|298729353|gb|EFI69904.1| putative RNA methyltransferase [Lysinibacillus fusiformis ZC1] Length = 455 Score = 38.9 bits (89), Expect = 0.70, Method: Compositional matrix adjust. Identities = 36/121 (29%), Positives = 64/121 (52%), Gaps = 17/121 (14%) Query: 62 NVRLTLSSDTF-EPRPE-TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119 +VR +S+ +F + PE TE+L AL ++ + + R++D G G + L L +++ Sbjct: 274 DVRFEISARSFYQVNPEQTEVLYKQALDYA----DLQGDERVIDAYCGIGTISLFLAQKA 329 Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERF------DTLQSDWFSSVEGL-FDVIVSNP 172 +GV+I +A+E AK NA+ NG + + + + W+ EG DV+V +P Sbjct: 330 KTV--MGVEIVPQAIEDAKRNALLNGFTNTYFEAGPAEEVIPRWYK--EGKEADVLVVDP 385 Query: 173 P 173 P Sbjct: 386 P 386 >gi|257893689|ref|ZP_05673342.1| type I restriction-modification system M subunit [Enterococcus faecium 1,231,408] gi|257830068|gb|EEV56675.1| type I restriction-modification system M subunit [Enterococcus faecium 1,231,408] Length = 512 Score = 38.9 bits (89), Expect = 0.70, Method: Compositional matrix adjust. Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 9/90 (10%) Query: 94 EKRDVVRILDLGTGTGAVCLAL---LKESPFFKGVGVDISCKALEIAKSNAVTNGV-SER 149 ++R + D G+G++ L + L K G +++ +AK N + +GV +E Sbjct: 196 KERRFFSVFDPTMGSGSLMLNVRNYLTHPDNVKYHGQELNTTTYNLAKMNLILHGVDAEE 255 Query: 150 F-----DTLQSDWFSSVEGLFDVIVSNPPY 174 DTL DW + FD +V NPPY Sbjct: 256 MNLRNGDTLNKDWPTDEPYTFDAVVMNPPY 285 >gi|194016025|ref|ZP_03054640.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Bacillus pumilus ATCC 7061] gi|194012380|gb|EDW21947.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Bacillus pumilus ATCC 7061] Length = 460 Score = 38.9 bits (89), Expect = 0.70, Method: Compositional matrix adjust. Identities = 40/160 (25%), Positives = 81/160 (50%), Gaps = 29/160 (18%) Query: 35 RFFLTNAIVRSLKHESIHRILG------WRDFY------NVRLTLSSDTF-EPRP-ETEL 80 RF +IV+++ + + I G W + Y +++ +S+ +F + P +T++ Sbjct: 240 RFPHVRSIVQNVNSKKTNVIFGDETTVLWGEEYIYDTIGDIKFAISARSFYQVNPAQTKV 299 Query: 81 LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140 L D AL ++ ++ ++V +D G G + L L +++ + GV+I +A+E AK N Sbjct: 300 LYDKALEYA--ELQGEEIV--IDAYCGIGTISLFLAQKAG--RVYGVEIVPEAIEDAKRN 353 Query: 141 AVTNGVSE------RFDTLQSDWFSSVEGL-FDVIVSNPP 173 A N ++ +T+ +W+ EG+ D +V +PP Sbjct: 354 AALNEINNVEFAVGEAETVIPNWYK--EGIKADTLVVDPP 391 >gi|209550153|ref|YP_002282070.1| ribosomal protein L11 methyltransferase [Rhizobium leguminosarum bv. trifolii WSM2304] gi|226710104|sp|B5ZWH3|PRMA_RHILW RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11 Mtase gi|209535909|gb|ACI55844.1| ribosomal L11 methyltransferase [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 292 Score = 38.9 bits (89), Expect = 0.70, Method: Compositional matrix adjust. Identities = 28/85 (32%), Positives = 40/85 (47%), Gaps = 9/85 (10%) Query: 93 IEKRDVVRILDLGTGTGAVCLAL--LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150 + R V LDLGTG+G + +A+ LK P DI A +A N NG++ Sbjct: 147 VRSRPVRNALDLGTGSGVLAIAVRKLKNIPVL---ATDIDPIATRVAAENVRRNGIASGI 203 Query: 151 DTLQSDWFSSV----EGLFDVIVSN 171 T + F S G FD+I++N Sbjct: 204 VTRTAPGFHSTAFSEHGPFDLIIAN 228 >gi|15896660|ref|NP_350009.1| S-adenosylmethionine-dependent methyltransferase [Clostridium acetobutylicum ATCC 824] gi|15026507|gb|AAK81349.1|AE007839_3 S-adenosylmethionine-dependent methyltransferase [Clostridium acetobutylicum ATCC 824] gi|325510824|gb|ADZ22460.1| S-adenosylmethionine-dependent methyltransferase [Clostridium acetobutylicum EA 2018] Length = 207 Score = 38.9 bits (89), Expect = 0.70, Method: Compositional matrix adjust. Identities = 29/85 (34%), Positives = 43/85 (50%), Gaps = 4/85 (4%) Query: 90 LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 + RI + + +LD+G GTG V L +L + G+D+S K +EIAK N + Sbjct: 40 IKRILRANPKTVLDVGCGTGNV-LKILAKDENLSLYGLDLSEKMIEIAKKNLKGRAELKL 98 Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPY 174 D+ W S+ FDVIV N + Sbjct: 99 GDSENMPWKSNS---FDVIVCNASF 120 >gi|331674025|ref|ZP_08374788.1| hypothetical protein ECNG_00610 [Escherichia coli TA280] gi|331069298|gb|EGI40690.1| hypothetical protein ECNG_00610 [Escherichia coli TA280] Length = 285 Score = 38.9 bits (89), Expect = 0.71, Method: Compositional matrix adjust. Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 4/83 (4%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 V R LD+G G+G + L L + + + V++ +A A+ N + ++R + +D Sbjct: 85 VKRCLDIGAGSGLLALMLAQRTDDSVMIDAVELESEAAAQAQENINQSPWAKRINVHTAD 144 Query: 157 ---WFSSVEGLFDVIVSNPPYIE 176 W + FD+I+SNPPY + Sbjct: 145 IQQWIAQQTVRFDLIISNPPYYQ 167 >gi|322389141|ref|ZP_08062703.1| methyltransferase [Streptococcus parasanguinis ATCC 903] gi|321144151|gb|EFX39567.1| methyltransferase [Streptococcus parasanguinis ATCC 903] Length = 248 Score = 38.9 bits (89), Expect = 0.71, Method: Compositional matrix adjust. Identities = 29/99 (29%), Positives = 51/99 (51%), Gaps = 7/99 (7%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 VDS L P++ KR + I+DL G GAV L + + +GV+I + ++A + Sbjct: 33 VDSVLLSRFPKLPKRGL--IVDLCAGNGAVGLFASTRTE-AQILGVEIQERLADMATRSI 89 Query: 142 VTNGVSERFDTLQSDWFS---SVEG-LFDVIVSNPPYIE 176 NG++++ + D ++G D+I+ NPPY + Sbjct: 90 ALNGLNQQMSMITDDLKHLPRHIKGSKVDIILCNPPYFK 128 >gi|320095377|ref|ZP_08027057.1| transferase [Actinomyces sp. oral taxon 178 str. F0338] gi|319977682|gb|EFW09345.1| transferase [Actinomyces sp. oral taxon 178 str. F0338] Length = 434 Score = 38.9 bits (89), Expect = 0.71, Method: Compositional matrix adjust. Identities = 28/75 (37%), Positives = 36/75 (48%), Gaps = 5/75 (6%) Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 LDLG G G L L + V D+S +A + + NA NG D F V Sbjct: 77 LDLGCGCGTQALYLATHC--GRVVATDLSARAGALTQFNAALNGAP--IDVRVGSLFEPV 132 Query: 162 EG-LFDVIVSNPPYI 175 G FD+IVSNPP++ Sbjct: 133 SGESFDLIVSNPPFV 147 >gi|312136784|ref|YP_004004121.1| methyltransferase type 11 [Methanothermus fervidus DSM 2088] gi|311224503|gb|ADP77359.1| Methyltransferase type 11 [Methanothermus fervidus DSM 2088] Length = 260 Score = 38.9 bits (89), Expect = 0.71, Method: Compositional matrix adjust. Identities = 31/97 (31%), Positives = 48/97 (49%), Gaps = 7/97 (7%) Query: 77 ETELLVDSALAFSLPRIEKRDVVRILDLGTGTG--AVCLALLKESPFFKGVGVDISCKAL 134 E + L D+ + + D + +LD+GTGTG A+ LA L S +D+S + L Sbjct: 28 EKKWLFDAWKNLLKKVLPEEDNLSVLDIGTGTGFLAIVLAELGHSV----TAIDVSSRML 83 Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVS 170 IAK A+ G++ F + S V FDV++S Sbjct: 84 NIAKKRAIQRGLNINFKLEDAMNLSDVYSEDFDVVIS 120 >gi|307325284|ref|ZP_07604487.1| methylase [Streptomyces violaceusniger Tu 4113] gi|306889088|gb|EFN20071.1| methylase [Streptomyces violaceusniger Tu 4113] Length = 237 Score = 38.9 bits (89), Expect = 0.71, Method: Compositional matrix adjust. Identities = 27/77 (35%), Positives = 39/77 (50%), Gaps = 4/77 (5%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LD+GTG+GA+ L + VD+S A+ A G+ R L D + Sbjct: 54 VLDVGTGSGALALVAAGRG-AAQVTAVDVSPLAVGATWLRARLKGLPVRV--LHGDLLTP 110 Query: 161 VEGL-FDVIVSNPPYIE 176 V G FD+IV+NPPY+ Sbjct: 111 VAGRGFDLIVANPPYVP 127 >gi|291326172|ref|ZP_06123484.2| putative methyltransferase [Providencia rettgeri DSM 1131] gi|291315282|gb|EFE55735.1| putative methyltransferase [Providencia rettgeri DSM 1131] Length = 373 Score = 38.9 bits (89), Expect = 0.71, Method: Compositional matrix adjust. Identities = 31/96 (32%), Positives = 44/96 (45%), Gaps = 3/96 (3%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 RILDLG+G+G + ++ GVG+D+S E AK A GVS R + +D Sbjct: 163 ARILDLGSGSGEMLCTWARDHAI-TGVGIDMSQLFSEQAKRRAEELGVSSRVQFIHNDAA 221 Query: 159 SSV-EGLFDVIVS-NPPYIESVIVDCLGLEVRDFDP 192 V E FDV+ +I +GL + P Sbjct: 222 GYVAEEKFDVVACIGATWIAGGFAGTVGLLAQSLKP 257 >gi|52079176|ref|YP_077967.1| Type I restriction modification system protein HsdMI [Bacillus licheniformis ATCC 14580] gi|52784543|ref|YP_090372.1| hypothetical protein BLi00744 [Bacillus licheniformis ATCC 14580] gi|52002387|gb|AAU22329.1| Type I restriction modification system protein HsdMI [Bacillus licheniformis ATCC 14580] gi|52347045|gb|AAU39679.1| putative protein [Bacillus licheniformis ATCC 14580] Length = 530 Score = 38.9 bits (89), Expect = 0.71, Method: Compositional matrix adjust. Identities = 23/90 (25%), Positives = 42/90 (46%), Gaps = 9/90 (10%) Query: 94 EKRDVVRILDLGTGTGAVCLALLKESPFFKGV---GVDISCKALEIAKSNAVTNGVSER- 149 E + + + D G+G++ L + + V G +++ +AK N + +GV++ Sbjct: 214 EDKKLFSVFDPTMGSGSLMLNIRNYINYPDSVKYHGQELNTTTFNLAKMNLILHGVNKED 273 Query: 150 -----FDTLQSDWFSSVEGLFDVIVSNPPY 174 DTL DW + FD ++ NPPY Sbjct: 274 MRLRNGDTLNKDWPTDEPYTFDAVLMNPPY 303 >gi|118579841|ref|YP_901091.1| methyltransferase small [Pelobacter propionicus DSM 2379] gi|118502551|gb|ABK99033.1| methyltransferase small [Pelobacter propionicus DSM 2379] Length = 268 Score = 38.9 bits (89), Expect = 0.71, Method: Compositional matrix adjust. Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 4/82 (4%) Query: 97 DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 D R+ DLGTG G + L L + VG + + +A NA NG+ +R ++ D Sbjct: 66 DDARLADLGTGCGVIPLLLCRRFGSATAVGFESNGSMARLAAENARRNGLEQRAAFVERD 125 Query: 157 WFSSVEGL----FDVIVSNPPY 174 FD + +NPP+ Sbjct: 126 ILELRRHYPVSSFDGVTANPPF 147 >gi|270293232|ref|ZP_06199443.1| type I restriction-modification system, M subunit [Streptococcus sp. M143] gi|270279211|gb|EFA25057.1| type I restriction-modification system, M subunit [Streptococcus sp. M143] Length = 533 Score = 38.9 bits (89), Expect = 0.72, Method: Compositional matrix adjust. Identities = 32/112 (28%), Positives = 53/112 (47%), Gaps = 13/112 (11%) Query: 72 FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV---GVD 128 + P+P +L+ + +AF L R E + I D G+G++ L K S + V G + Sbjct: 199 YTPQPVAKLM--TQIAF-LGR-EDQQGFTIYDATMGSGSLLLNAKKYSHKPQTVVYFGQE 254 Query: 129 ISCKALEIAKSNAVTNGVS------ERFDTLQSDWFSSVEGLFDVIVSNPPY 174 ++ +A+ N + +GV DTL DW + FD ++ NPPY Sbjct: 255 LNTSTYNLARMNMILHGVPVENQFLHNADTLDEDWPTQEPTNFDGVLMNPPY 306 >gi|195977713|ref|YP_002122957.1| putative methylase [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|195974418|gb|ACG61944.1| putative methylase [Streptococcus equi subsp. zooepidemicus MGCS10565] Length = 179 Score = 38.9 bits (89), Expect = 0.72, Method: Compositional matrix adjust. Identities = 26/84 (30%), Positives = 42/84 (50%), Gaps = 4/84 (4%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW-- 157 R+LDL G+G + + + + V V+ KA I ++N S++F L+ D Sbjct: 44 RVLDLFAGSGGLSIEAISRG-MSEAVLVERDRKAQAIIQANIEMTKASQQFTLLKMDAER 102 Query: 158 -FSSVEGLFDVIVSNPPYIESVIV 180 F + G FDV+ +PPY + IV Sbjct: 103 AFDHLSGQFDVVFLDPPYAKETIV 126 >gi|294619904|ref|ZP_06699280.1| type I restriction-modification system, M subunit [Enterococcus faecium E1679] gi|291593841|gb|EFF25339.1| type I restriction-modification system, M subunit [Enterococcus faecium E1679] Length = 531 Score = 38.9 bits (89), Expect = 0.72, Method: Compositional matrix adjust. Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 9/90 (10%) Query: 94 EKRDVVRILDLGTGTGAVCLAL---LKESPFFKGVGVDISCKALEIAKSNAVTNGV-SER 149 ++R + D G+G++ L + L K G +++ +AK N + +GV +E Sbjct: 215 KERRFFSVFDPTMGSGSLMLNVRNYLTHPDNVKYHGQELNTTTYNLAKMNLILHGVDAEE 274 Query: 150 F-----DTLQSDWFSSVEGLFDVIVSNPPY 174 DTL DW + FD +V NPPY Sbjct: 275 MNLRNGDTLNKDWPTDEPYTFDAVVMNPPY 304 >gi|118777359|ref|XP_307877.2| AGAP009458-PA [Anopheles gambiae str. PEST] gi|116132913|gb|EAA03648.2| AGAP009458-PA [Anopheles gambiae str. PEST] Length = 230 Score = 38.9 bits (89), Expect = 0.72, Method: Compositional matrix adjust. Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 5/88 (5%) Query: 93 IEKRDVVRILDLGTGTGAVCLALLKESPFFKG--VGVDISCKALEIAKSNAVTNGVSERF 150 I+ R +++G G+G V +AL K P + +G D++ A + + A NG R Sbjct: 37 IKARQPSLCVEIGPGSGVVIVALSKHLPAGQTHCIGFDLNPNACRMTQKTAHLNG--SRV 94 Query: 151 DTLQSDWFSSVEGL-FDVIVSNPPYIES 177 D + D + + D++V NPPY+ + Sbjct: 95 DVVNMDLLAGLRPTSVDLLVFNPPYVPT 122 >gi|15643454|ref|NP_228500.1| hypothetical protein TM0691 [Thermotoga maritima MSB8] gi|170288042|ref|YP_001738280.1| methyltransferase type 11 [Thermotoga sp. RQ2] gi|281411919|ref|YP_003345998.1| Methyltransferase type 11 [Thermotoga naphthophila RKU-10] gi|4981214|gb|AAD35773.1|AE001741_6 conserved hypothetical protein [Thermotoga maritima MSB8] gi|170175545|gb|ACB08597.1| Methyltransferase type 11 [Thermotoga sp. RQ2] gi|281373022|gb|ADA66584.1| Methyltransferase type 11 [Thermotoga naphthophila RKU-10] Length = 216 Score = 38.9 bits (89), Expect = 0.72, Method: Compositional matrix adjust. Identities = 31/85 (36%), Positives = 43/85 (50%), Gaps = 11/85 (12%) Query: 96 RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155 ++V +L+LG+G G V AL K K VGV+ + E A N + ER + Sbjct: 37 KNVRSVLELGSGVGTVSFALAKLY-NVKVVGVEKEKELYEKALEGISLNKLEERVSFVN- 94 Query: 156 DWFSSVEGL------FDVIVSNPPY 174 SSVE L FD++VSNPP+ Sbjct: 95 ---SSVEELSFPPESFDMVVSNPPH 116 >gi|186684950|ref|YP_001868146.1| methyltransferase type 11 [Nostoc punctiforme PCC 73102] gi|186467402|gb|ACC83203.1| Methyltransferase type 11 [Nostoc punctiforme PCC 73102] Length = 393 Score = 38.9 bits (89), Expect = 0.72, Method: Compositional matrix adjust. Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 2/78 (2%) Query: 92 RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RF 150 + +K+D+ RILD G GTG L+ +P VG+D+S AL++AK +G + F Sbjct: 50 KPQKQDI-RILDAGCGTGVSTEYLVHLNPQASVVGIDLSTGALDVAKERCQRSGANRVEF 108 Query: 151 DTLQSDWFSSVEGLFDVI 168 L + G FD+I Sbjct: 109 HHLSLFDVEQLPGEFDLI 126 >gi|299136874|ref|ZP_07030057.1| Methyltransferase type 12 [Acidobacterium sp. MP5ACTX8] gi|298601389|gb|EFI57544.1| Methyltransferase type 12 [Acidobacterium sp. MP5ACTX8] Length = 481 Score = 38.9 bits (89), Expect = 0.73, Method: Compositional matrix adjust. Identities = 20/50 (40%), Positives = 30/50 (60%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 R+LDLG G G + LL + F +G+D+S ++LEIAK + + ER Sbjct: 290 RVLDLGCGEGKLLRYLLADQQFEAILGMDVSWRSLEIAKDRLKLDQLPER 339 >gi|294616002|ref|ZP_06695828.1| type I restriction-modification system, M subunit [Enterococcus faecium E1636] gi|291591136|gb|EFF22819.1| type I restriction-modification system, M subunit [Enterococcus faecium E1636] Length = 530 Score = 38.9 bits (89), Expect = 0.73, Method: Compositional matrix adjust. Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 9/90 (10%) Query: 94 EKRDVVRILDLGTGTGAVCLAL---LKESPFFKGVGVDISCKALEIAKSNAVTNGV-SER 149 ++R + D G+G++ L + L K G +++ +AK N + +GV +E Sbjct: 215 KERRFFSVFDPTMGSGSLMLNVRNYLTHPDNVKYHGQELNTTTYNLAKMNLILHGVDAEE 274 Query: 150 F-----DTLQSDWFSSVEGLFDVIVSNPPY 174 DTL DW + FD +V NPPY Sbjct: 275 MNLRNGDTLNKDWPTDEPYTFDAVVMNPPY 304 >gi|281412831|ref|YP_003346910.1| Methyltransferase type 11 [Thermotoga naphthophila RKU-10] gi|281373934|gb|ADA67496.1| Methyltransferase type 11 [Thermotoga naphthophila RKU-10] Length = 248 Score = 38.9 bits (89), Expect = 0.73, Method: Compositional matrix adjust. Identities = 39/115 (33%), Positives = 58/115 (50%), Gaps = 13/115 (11%) Query: 59 DFYNVRLTLSSDTFEPRPETEL---LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL 115 +FY+ R+ + D+ P+ +L L+ S L L ++ R+LDLG GTG L L Sbjct: 7 EFYD-RIARAYDSMYETPKWKLYHRLIGSFLEEYL-----KNPCRVLDLGGGTGKWSLFL 60 Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL--QSDWFSSVEGLFDVI 168 + F+ V VD S + LE+A+ V N V R + L S F +V L DV+ Sbjct: 61 QERG--FEVVLVDPSKEMLEVAREKGVKNVVEARAEDLPFPSGAFEAVLALGDVL 113 >gi|156975686|ref|YP_001446593.1| 16S rRNA m2G 1207 methyltransferase [Vibrio harveyi ATCC BAA-1116] gi|226713152|sp|A7MUT5|RSMC_VIBHB RecName: Full=Ribosomal RNA small subunit methyltransferase C; AltName: Full=16S rRNA m2G1207 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rsmC gi|156527280|gb|ABU72366.1| hypothetical protein VIBHAR_03421 [Vibrio harveyi ATCC BAA-1116] Length = 341 Score = 38.9 bits (89), Expect = 0.73, Method: Compositional matrix adjust. Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 6/86 (6%) Query: 89 SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148 +LP++ + +LD G G G + + K +P DI+ A+ +++ NG+S Sbjct: 196 TLPKLSGK----VLDFGCGAGVLGAFMAKANPEIAIEMCDINAYAITSSQATLEANGLSG 251 Query: 149 RFDTLQSDWFSSVEGLFDVIVSNPPY 174 R SD +S + IVSNPP+ Sbjct: 252 R--VFASDIYSDTAKDYRFIVSNPPF 275 >gi|325269122|ref|ZP_08135742.1| methyltransferase [Prevotella multiformis DSM 16608] gi|324988509|gb|EGC20472.1| methyltransferase [Prevotella multiformis DSM 16608] Length = 243 Score = 38.9 bits (89), Expect = 0.73, Method: Compositional matrix adjust. Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 5/80 (6%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD----TLQ 154 ILD+GTGTG + L + + P +++ AL A+ N + + +R TLQ Sbjct: 45 AHILDIGTGTGLIALMMAQRFPSAHIDAIEMDEGALADARLNIMRSPFKDRISVIGVTLQ 104 Query: 155 SDWFSSVEGLFDVIVSNPPY 174 + + + +D IV NPPY Sbjct: 105 R-YRAQADRPYDAIVCNPPY 123 >gi|311896054|dbj|BAJ28462.1| hypothetical protein KSE_26500 [Kitasatospora setae KM-6054] Length = 535 Score = 38.9 bits (89), Expect = 0.73, Method: Compositional matrix adjust. Identities = 22/52 (42%), Positives = 30/52 (57%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 R+LDLG G G + ALLKE + +GVD+S +AL IA + + ER Sbjct: 335 AARVLDLGCGQGELVGALLKEPRVTEVLGVDVSSRALTIAARRLRLDRLPER 386 >gi|291531688|emb|CBK97273.1| Predicted N6-adenine-specific DNA methylase [Eubacterium siraeum 70/3] Length = 376 Score = 38.9 bits (89), Expect = 0.73, Method: Compositional matrix adjust. Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 3/68 (4%) Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW--FSSVEGLFDVIVSN 171 A +++ FK G DI +A+ + + NAV GV E + Q D F+ EG V++ N Sbjct: 244 ANIRKPENFKLYGFDIDPEAVRLTRDNAVKAGVGEYIEVKQRDIADFTYPEGC-TVVLCN 302 Query: 172 PPYIESVI 179 PPY E ++ Sbjct: 303 PPYGERML 310 >gi|229493682|ref|ZP_04387467.1| methyltransferase type 12 [Rhodococcus erythropolis SK121] gi|229319643|gb|EEN85479.1| methyltransferase type 12 [Rhodococcus erythropolis SK121] Length = 467 Score = 38.9 bits (89), Expect = 0.73, Method: Compositional matrix adjust. Identities = 31/89 (34%), Positives = 46/89 (51%), Gaps = 11/89 (12%) Query: 74 PRPETELL---VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130 PRP+ L VD+ LA +L R+ R +V D+G G G + L+ + F K VGVD+S Sbjct: 260 PRPDPPLARLRVDAVLA-TLQRLHVRTIV---DIGCGEGKLIEVLMPHAQFDKLVGVDVS 315 Query: 131 CKALEIA----KSNAVTNGVSERFDTLQS 155 + L A K +++ ER +QS Sbjct: 316 ARELTRAQRRLKFTEMSDAQRERVSLMQS 344 >gi|323340835|ref|ZP_08081087.1| methyltransferase [Lactobacillus ruminis ATCC 25644] gi|323091958|gb|EFZ34578.1| methyltransferase [Lactobacillus ruminis ATCC 25644] Length = 248 Score = 38.9 bits (89), Expect = 0.73, Method: Compositional matrix adjust. Identities = 35/118 (29%), Positives = 56/118 (47%), Gaps = 11/118 (9%) Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 +++ SS+ F + LL D F+ P +K +I+DL G GAV L L +S Sbjct: 19 IKIIQSSEVFSFSLDAVLLAD----FANPAKKKEQ--KIVDLCAGNGAVGLFLTPKSS-A 71 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPYIE 176 + V+I + ++AK + NG+ ER + D + + L D + NPPY E Sbjct: 72 QIYEVEIQPRLADMAKRSIDLNGLEERVTVINDDLNNVFDYLAKDSIDTVTCNPPYFE 129 >gi|194017752|ref|ZP_03056362.1| ribosomal protein L11 methyltransferase [Bacillus pumilus ATCC 7061] gi|194010652|gb|EDW20224.1| ribosomal protein L11 methyltransferase [Bacillus pumilus ATCC 7061] Length = 311 Score = 38.9 bits (89), Expect = 0.73, Method: Compositional matrix adjust. Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 9/75 (12%) Query: 101 ILDLGTGTG----AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 ++D+GTG+G A + K+ F D+ A+E AK N NGVSE+ Q++ Sbjct: 179 VIDVGTGSGILSVAAAMVGAKDIQAF-----DLDTVAVESAKQNIELNGVSEQVTVKQNN 233 Query: 157 WFSSVEGLFDVIVSN 171 + G DVIV+N Sbjct: 234 LLDGISGERDVIVAN 248 >gi|297618925|ref|YP_003707030.1| methyltransferase small [Methanococcus voltae A3] gi|297377902|gb|ADI36057.1| methyltransferase small [Methanococcus voltae A3] Length = 214 Score = 38.9 bits (89), Expect = 0.73, Method: Compositional matrix adjust. Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 5/76 (6%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER-FDTLQSDWFS 159 ILD+G G GA+ ++L + + DI+ +++ +AK N N V + Q + + Sbjct: 59 ILDMGCGYGAIGISLADDVNSV--IMTDINKRSVSLAKQNIKLNHVKNKNIKIFQGNLYE 116 Query: 160 SV--EGLFDVIVSNPP 173 V + FD I+SNPP Sbjct: 117 EVPKDAKFDTIISNPP 132 >gi|329121039|ref|ZP_08249670.1| SAM-dependent methyltransferase [Dialister micraerophilus DSM 19965] gi|327471201|gb|EGF16655.1| SAM-dependent methyltransferase [Dialister micraerophilus DSM 19965] Length = 246 Score = 38.9 bits (89), Expect = 0.74, Method: Compositional matrix adjust. Identities = 32/97 (32%), Positives = 46/97 (47%), Gaps = 7/97 (7%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 +DS L I+ +D +I DLGTGTG + L LL +I+ +IAK N Sbjct: 33 IDSVLLAHYVSIKNKD--KIADLGTGTGIIPL-LLSALGAKDIAAFEINPIMADIAKRNV 89 Query: 142 VTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPY 174 N ++ L+ D+ E G F +V+NPPY Sbjct: 90 SGNKKNDIIKVLECDYKKIKEYYPTGSFTSVVANPPY 126 >gi|312952954|ref|ZP_07771810.1| type I restriction-modification system, M subunit [Enterococcus faecalis TX0102] gi|310629095|gb|EFQ12378.1| type I restriction-modification system, M subunit [Enterococcus faecalis TX0102] Length = 531 Score = 38.9 bits (89), Expect = 0.74, Method: Compositional matrix adjust. Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 9/90 (10%) Query: 94 EKRDVVRILDLGTGTGAVCLAL---LKESPFFKGVGVDISCKALEIAKSNAVTNGV-SER 149 ++R + D G+G++ L + L K G +++ +AK N + +GV +E Sbjct: 215 KERRFFSVFDPTMGSGSLMLNVRNYLTHPDNVKYHGQELNTTTYNLAKMNLILHGVDAEE 274 Query: 150 F-----DTLQSDWFSSVEGLFDVIVSNPPY 174 DTL DW + FD +V NPPY Sbjct: 275 MNLRNGDTLNKDWPTDEPYTFDAVVMNPPY 304 >gi|262831373|sp|C6CNL2|TRMN6_DICZE RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName: Full=tRNA m6A37 methyltransferase Length = 253 Score = 38.9 bits (89), Expect = 0.74, Method: Compositional matrix adjust. Identities = 30/94 (31%), Positives = 46/94 (48%), Gaps = 5/94 (5%) Query: 93 IEKRDVVRILDLGTGTGAVCLALLKESPF-FKGVGVDISCKALEIAKSNAVTNGVSERFD 151 + R+ RILD+G G+G + L L + S F GV++ A A NA + ++ Sbjct: 42 VPLREETRILDIGCGSGLLGLMLAQRSGGRFPIDGVELDAAASTQAADNAAASPWADCIR 101 Query: 152 TLQSD---WFSSVEGLFDVIVSNPPYIESVIVDC 182 +D + + + +IVSNPPY S VDC Sbjct: 102 IYPADIVGYAQTATRRYSLIVSNPPYF-SPGVDC 134 >gi|300711088|ref|YP_003736902.1| methylase [Halalkalicoccus jeotgali B3] gi|299124771|gb|ADJ15110.1| methylase [Halalkalicoccus jeotgali B3] Length = 191 Score = 38.9 bits (89), Expect = 0.75, Method: Compositional matrix adjust. Identities = 34/123 (27%), Positives = 55/123 (44%), Gaps = 14/123 (11%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LD GTG+G V + + K + + D++ A E A+ + + D +S Sbjct: 39 VLDCGTGSGHVGVRMRKAGA--RVIASDLNPHACERAREAGLEAVRGDLLDPFRS----- 91 Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220 G+FD + NPPY+ + E D+ ++L GG G + DGV R L D Sbjct: 92 --GVFDAVAFNPPYLPTEPE----TEWDDW-MEVALSGGQSGRAVIEPFLDGVGRVLAPD 144 Query: 221 GLC 223 G+ Sbjct: 145 GIA 147 >gi|218895170|ref|YP_002443581.1| hypothetical protein BCG9842_B5277 [Bacillus cereus G9842] gi|218542779|gb|ACK95173.1| conserved hypothetical protein [Bacillus cereus G9842] Length = 246 Score = 38.9 bits (89), Expect = 0.75, Method: Compositional matrix adjust. Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 5/81 (6%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LDL TG V L LL K GV+I + ++ + NG+ ER + D Sbjct: 48 LLDLCTGNAVVPL-LLSTRTKGKITGVEIQERLYDMGVRSVQYNGLEERIHLIHGDLKDM 106 Query: 161 VEGL----FDVIVSNPPYIES 177 E L +DV+ NPPY ++ Sbjct: 107 PEKLGRHQYDVVTCNPPYFQT 127 >gi|153835389|ref|ZP_01988056.1| ribosomal RNA small subunit methyltransferase C (rRNA(guanine-N(2)-)-methyltransferase) [Vibrio harveyi HY01] gi|148868091|gb|EDL67260.1| ribosomal RNA small subunit methyltransferase C (rRNA(guanine-N(2)-)-methyltransferase) [Vibrio harveyi HY01] Length = 341 Score = 38.9 bits (89), Expect = 0.75, Method: Compositional matrix adjust. Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 6/86 (6%) Query: 89 SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148 +LP++ + +LD G G G + + K +P DI+ A+ +++ NG+S Sbjct: 196 TLPKLSGK----VLDFGCGAGVLGAFMAKANPEIAIEMCDINAYAITSSQATLEANGLSG 251 Query: 149 RFDTLQSDWFSSVEGLFDVIVSNPPY 174 R SD +S + IVSNPP+ Sbjct: 252 R--VFASDIYSDTAKDYRFIVSNPPF 275 >gi|148270523|ref|YP_001244983.1| methyltransferase type 11 [Thermotoga petrophila RKU-1] gi|147736067|gb|ABQ47407.1| Methyltransferase type 11 [Thermotoga petrophila RKU-1] Length = 248 Score = 38.9 bits (89), Expect = 0.75, Method: Compositional matrix adjust. Identities = 39/115 (33%), Positives = 58/115 (50%), Gaps = 13/115 (11%) Query: 59 DFYNVRLTLSSDTFEPRPETEL---LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL 115 +FY+ R+ + D+ P+ +L L+ S L L ++ R+LDLG GTG L L Sbjct: 7 EFYD-RIARAYDSMYETPKWKLYHRLIGSFLEEYL-----KNPCRVLDLGGGTGKWSLFL 60 Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL--QSDWFSSVEGLFDVI 168 + F+ V VD S + LE+A+ V N V R + L S F +V L DV+ Sbjct: 61 QERG--FEVVLVDPSKEMLEVAREKGVKNVVEARAEDLPFPSGAFEAVLALGDVL 113 >gi|58336710|ref|YP_193295.1| hypothetical protein LBA0373 [Lactobacillus acidophilus NCFM] gi|58254027|gb|AAV42264.1| hypothetical protein LBA0373 [Lactobacillus acidophilus NCFM] Length = 206 Score = 38.9 bits (89), Expect = 0.75, Method: Compositional matrix adjust. Identities = 26/96 (27%), Positives = 48/96 (50%), Gaps = 9/96 (9%) Query: 80 LLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKS 139 +L+ + S P+ ILD+GTG G + L K P + +D++ + L +A+ Sbjct: 52 VLIKAMKDISFPK------ANILDVGTGYGPIGLFAAKFWPDQEVDMIDVNERGLNLARE 105 Query: 140 NAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPP 173 NA N + E + S+ + ++ F +I++NPP Sbjct: 106 NAKVNNI-ENVNIYASNCYEQIDNDKKFGLILTNPP 140 >gi|46578868|ref|YP_009676.1| hypothetical protein DVU0452 [Desulfovibrio vulgaris str. Hildenborough] gi|46448280|gb|AAS94935.1| hypothetical protein DVU_0452 [Desulfovibrio vulgaris str. Hildenborough] Length = 559 Score = 38.9 bits (89), Expect = 0.75, Method: Compositional matrix adjust. Identities = 23/54 (42%), Positives = 30/54 (55%) Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 DLGTG G V LALL S GVG++ + A++NA G+S RF +D Sbjct: 287 DLGTGCGVVGLALLLGSSRLSGVGIEQDAALVNAARANAHRLGLSTRFTVHHAD 340 >gi|16262543|ref|NP_435336.1| putative methyltransferase [Sinorhizobium meliloti 1021] gi|307300711|ref|ZP_07580486.1| Methyltransferase type 11 [Sinorhizobium meliloti BL225C] gi|14523153|gb|AAK64748.1| putative methyltransferase [Sinorhizobium meliloti 1021] gi|306904245|gb|EFN34830.1| Methyltransferase type 11 [Sinorhizobium meliloti BL225C] Length = 261 Score = 38.9 bits (89), Expect = 0.75, Method: Compositional matrix adjust. Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 1/72 (1%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV-SERFDTLQSDWF 158 R+LD+G G G + +P + +GVDIS + LE A+ + G+ + F+ + + Sbjct: 31 RVLDIGCGAGQTTREAARAAPQGEAIGVDISAEMLEEARRRSAAEGLRNAMFEQGDAQFH 90 Query: 159 SSVEGLFDVIVS 170 G FD+ +S Sbjct: 91 GFPTGSFDLCIS 102 >gi|332364614|gb|EGJ42383.1| type I restriction-modification system DNA-methyltransferase [Streptococcus sanguinis SK1059] Length = 533 Score = 38.9 bits (89), Expect = 0.75, Method: Compositional matrix adjust. Identities = 32/112 (28%), Positives = 53/112 (47%), Gaps = 13/112 (11%) Query: 72 FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV---GVD 128 + P+P +L+ + +AF L R E + I D G+G++ L K S + V G + Sbjct: 199 YTPQPVAKLM--TQIAF-LGR-EDQQGFTIYDATMGSGSLLLNAKKYSHKPQTVVYFGQE 254 Query: 129 ISCKALEIAKSNAVTNGVS------ERFDTLQSDWFSSVEGLFDVIVSNPPY 174 ++ +A+ N + +GV DTL DW + FD ++ NPPY Sbjct: 255 LNTSTYNLARMNMILHGVPVENQFLHNADTLDEDWPTQEPTNFDGVLMNPPY 306 >gi|300718657|ref|YP_003743460.1| ribosomal protein L11 methyltransferase [Erwinia billingiae Eb661] gi|299064493|emb|CAX61613.1| Ribosomal protein L11 methyltransferase [Erwinia billingiae Eb661] Length = 293 Score = 38.9 bits (89), Expect = 0.75, Method: Compositional matrix adjust. Identities = 44/151 (29%), Positives = 69/151 (45%), Gaps = 36/151 (23%) Query: 74 PRPET-ELLVDSALAFS----------LPRIEKRDVV--RILDLGTGTGAVCLALLKESP 120 P PE +++D LAF L ++ D+ ++D G G+G + +A LK Sbjct: 122 PDPEAVNVMLDPGLAFGTGTHPTTSMCLTWLDGLDLQGKTVIDFGCGSGILAIAALKLG- 180 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTL----QSDWFSSVEGLFDVIVSNPPYIE 176 +G+DI +A++ ++ NA NGVS+R Q D S+ DV+V+N Sbjct: 181 AASAIGIDIDPQAIQASRDNAERNGVSDRLSLYLPHEQPDNLSA-----DVVVAN----- 230 Query: 177 SVIVDCLGLEVRDFDPRIS---LDGGIDGLS 204 L +R+ P IS + GG GLS Sbjct: 231 -----ILAGPLRELAPLISVLPVKGGSLGLS 256 >gi|229550755|ref|ZP_04439480.1| possible site-specific DNA-methyltransferase (adenine-specific) [Lactobacillus rhamnosus LMS2-1] gi|229315866|gb|EEN81839.1| possible site-specific DNA-methyltransferase (adenine-specific) [Lactobacillus rhamnosus LMS2-1] Length = 540 Score = 38.9 bits (89), Expect = 0.75, Method: Compositional matrix adjust. Identities = 25/86 (29%), Positives = 40/86 (46%), Gaps = 9/86 (10%) Query: 98 VVRILDLGTGTGAVCLAL---LKESPFFKGVGVDISCKALEIAKSNAVTNGVS------E 148 V I D G+G++ L + +++ G +++ +A+ N + +GVS Sbjct: 232 VRTIYDPAVGSGSLLLNVGQHVQDPNLVSYHGQELNTTTYNLARMNLMLHGVSYDDMHLR 291 Query: 149 RFDTLQSDWFSSVEGLFDVIVSNPPY 174 DTL DW LFD +V NPPY Sbjct: 292 NGDTLSKDWPVDEPYLFDAVVMNPPY 317 >gi|119383374|ref|YP_914430.1| ribosomal L11 methyltransferase [Paracoccus denitrificans PD1222] gi|119373141|gb|ABL68734.1| [LSU ribosomal protein L11P]-lysine N-methyltransferase [Paracoccus denitrificans PD1222] Length = 289 Score = 38.9 bits (89), Expect = 0.75, Method: Compositional matrix adjust. Identities = 26/97 (26%), Positives = 50/97 (51%), Gaps = 16/97 (16%) Query: 74 PRPETELLVDSALAF-------------SLPRI--EKRDVVRILDLGTGTGAVCLALLKE 118 P LL+++A+AF +L R+ E + RI+D+G GT + +A + Sbjct: 110 PAGAEALLIEAAMAFGTGHHATTKGCLLALDRLIAEGVEPRRIVDIGCGTAVLAMAAARS 169 Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155 P G DI +A+++A++N + NG+ R + +++ Sbjct: 170 FPVIVLAG-DIDPQAVDVARANVIANGLDGRVECVEA 205 >gi|320533776|ref|ZP_08034375.1| conserved domain protein [Actinomyces sp. oral taxon 171 str. F0337] gi|320134009|gb|EFW26358.1| conserved domain protein [Actinomyces sp. oral taxon 171 str. F0337] Length = 267 Score = 38.9 bits (89), Expect = 0.76, Method: Compositional matrix adjust. Identities = 31/98 (31%), Positives = 41/98 (41%), Gaps = 26/98 (26%) Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS-------------- 147 +DLG G G L LL+ + + V DIS +AL NA GVS Sbjct: 1 MDLGCGCGIQTLYLLRHAEYV--VATDISARALAFTAFNAALAGVSVAGALGAGTESVAG 58 Query: 148 ---------ERFDTLQSDWFSSVEGL-FDVIVSNPPYI 175 R + L+ V G FD+IVSNPP++ Sbjct: 59 SESGSDSGAGRLELLRGSLLEPVAGRRFDLIVSNPPFV 96 >gi|291556758|emb|CBL33875.1| Predicted N6-adenine-specific DNA methylase [Eubacterium siraeum V10Sc8a] Length = 376 Score = 38.9 bits (89), Expect = 0.76, Method: Compositional matrix adjust. Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 3/68 (4%) Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW--FSSVEGLFDVIVSN 171 A +++ FK G DI +A+ + + NAV GV E + Q D F+ EG V++ N Sbjct: 244 ANIRKPENFKLYGFDIDPEAVRLTRDNAVKAGVGEYIEVKQRDVADFTYPEGC-TVVLCN 302 Query: 172 PPYIESVI 179 PPY E ++ Sbjct: 303 PPYGERML 310 >gi|256853743|ref|ZP_05559108.1| type I restriction-modification system M subunit [Enterococcus faecalis T8] gi|256710686|gb|EEU25729.1| type I restriction-modification system M subunit [Enterococcus faecalis T8] gi|315030240|gb|EFT42172.1| type I restriction-modification system, M subunit [Enterococcus faecalis TX4000] gi|315144777|gb|EFT88793.1| type I restriction-modification system, M subunit [Enterococcus faecalis TX2141] Length = 530 Score = 38.9 bits (89), Expect = 0.76, Method: Compositional matrix adjust. Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 9/90 (10%) Query: 94 EKRDVVRILDLGTGTGAVCLAL---LKESPFFKGVGVDISCKALEIAKSNAVTNGV-SER 149 ++R + D G+G++ L + L K G +++ +AK N + +GV +E Sbjct: 215 KERRFFSVFDPTMGSGSLMLNVRNYLTHPDNVKYHGQELNTTTYNLAKMNLILHGVDAEE 274 Query: 150 F-----DTLQSDWFSSVEGLFDVIVSNPPY 174 DTL DW + FD +V NPPY Sbjct: 275 MNLRNGDTLNKDWPTDEPYTFDAVVMNPPY 304 >gi|300867820|ref|ZP_07112462.1| methyltransferase type 12 [Oscillatoria sp. PCC 6506] gi|300334151|emb|CBN57634.1| methyltransferase type 12 [Oscillatoria sp. PCC 6506] Length = 393 Score = 38.9 bits (89), Expect = 0.76, Method: Compositional matrix adjust. Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 3/87 (3%) Query: 84 SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143 +A +F + + +RILD G G+G L+ +P VG+D+S LE+AK Sbjct: 41 AAYSFCTGQKPDKQDIRILDAGCGSGVSTEYLVHLNPEASVVGIDLSSGTLEVAKERCRR 100 Query: 144 NGVSER--FDTLQSDWFSSVEGLFDVI 168 +G +ER F L +EG FD+I Sbjct: 101 SG-AERVAFHHLSLYDAGQLEGEFDLI 126 >gi|315497958|ref|YP_004086762.1| ribosomal l11 methyltransferase [Asticcacaulis excentricus CB 48] gi|315415970|gb|ADU12611.1| ribosomal L11 methyltransferase [Asticcacaulis excentricus CB 48] Length = 289 Score = 38.9 bits (89), Expect = 0.76, Method: Compositional matrix adjust. Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 1/58 (1%) Query: 93 IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150 ++K R+LD+G GTG + +A K + VG DI ++ I+ NA N + RF Sbjct: 145 LKKHRYERVLDVGAGTGVLAIAAAKTGTKY-AVGTDIDAISVRISNENAKLNAAAARF 201 >gi|293556630|ref|ZP_06675196.1| type I restriction-modification system, M subunit [Enterococcus faecium E1039] gi|291601216|gb|EFF31502.1| type I restriction-modification system, M subunit [Enterococcus faecium E1039] Length = 531 Score = 38.9 bits (89), Expect = 0.77, Method: Compositional matrix adjust. Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 9/90 (10%) Query: 94 EKRDVVRILDLGTGTGAVCLAL---LKESPFFKGVGVDISCKALEIAKSNAVTNGV-SER 149 ++R + D G+G++ L + L K G +++ +AK N + +GV +E Sbjct: 215 KERRFFSVFDPTMGSGSLMLNVRNYLTHPDNVKYHGQELNTTTYNLAKMNLILHGVDAEE 274 Query: 150 F-----DTLQSDWFSSVEGLFDVIVSNPPY 174 DTL DW + FD +V NPPY Sbjct: 275 MNLRNGDTLNKDWPTDEPYTFDAVVMNPPY 304 >gi|257090571|ref|ZP_05584932.1| type I restriction-modification system M subunit [Enterococcus faecalis CH188] gi|312905100|ref|ZP_07764221.1| type I restriction-modification system, M subunit [Enterococcus faecalis TX0635] gi|256999383|gb|EEU85903.1| type I restriction-modification system M subunit [Enterococcus faecalis CH188] gi|310631490|gb|EFQ14773.1| type I restriction-modification system, M subunit [Enterococcus faecalis TX0635] gi|315579072|gb|EFU91263.1| type I restriction-modification system, M subunit [Enterococcus faecalis TX0630] Length = 530 Score = 38.9 bits (89), Expect = 0.77, Method: Compositional matrix adjust. Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 9/90 (10%) Query: 94 EKRDVVRILDLGTGTGAVCLAL---LKESPFFKGVGVDISCKALEIAKSNAVTNGV-SER 149 ++R + D G+G++ L + L K G +++ +AK N + +GV +E Sbjct: 215 KERRFFSVFDPTMGSGSLMLNVRNYLTHPDNVKYHGQELNTTTYNLAKMNLILHGVDAEE 274 Query: 150 F-----DTLQSDWFSSVEGLFDVIVSNPPY 174 DTL DW + FD +V NPPY Sbjct: 275 MNLRNGDTLNKDWPTDEPYTFDAVVMNPPY 304 >gi|237785867|ref|YP_002906572.1| methylase of peptide chain release factor [Corynebacterium kroppenstedtii DSM 44385] gi|237758779|gb|ACR18029.1| methylase of peptide chain release factor [Corynebacterium kroppenstedtii DSM 44385] Length = 388 Score = 38.9 bits (89), Expect = 0.77, Method: Compositional matrix adjust. Identities = 32/103 (31%), Positives = 46/103 (44%), Gaps = 17/103 (16%) Query: 24 VDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVD 83 VDPD+ F + I R + E + I+G F + L + F PRPETEL+V+ Sbjct: 63 VDPDTA------EFFESCISRREQREPLQHIMGTVRFAGIDLLVGPGAFVPRPETELIVE 116 Query: 84 SA---LAFSLPRIEKRDV--------VRILDLGTGTGAVCLAL 115 A L +L +D I+DL TG G + L + Sbjct: 117 WAGKQLRRALDNRSDKDGSSKPVPTDYTIVDLCTGPGTLALGV 159 >gi|295837555|ref|ZP_06824488.1| methyltransferase [Streptomyces sp. SPB74] gi|197698363|gb|EDY45296.1| methyltransferase [Streptomyces sp. SPB74] Length = 338 Score = 38.9 bits (89), Expect = 0.77, Method: Compositional matrix adjust. Identities = 22/57 (38%), Positives = 29/57 (50%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 I+DLG+GTGA ALL P VD S L+ + A G+ R T+Q+D Sbjct: 111 HIVDLGSGTGAGTFALLDRFPEAHVTAVDSSAPHLQRLREKACAAGLDGRVRTVQAD 167 >gi|154496263|ref|ZP_02034959.1| hypothetical protein BACCAP_00548 [Bacteroides capillosus ATCC 29799] gi|150274346|gb|EDN01423.1| hypothetical protein BACCAP_00548 [Bacteroides capillosus ATCC 29799] Length = 399 Score = 38.9 bits (89), Expect = 0.77, Method: Compositional matrix adjust. Identities = 23/56 (41%), Positives = 33/56 (58%), Gaps = 3/56 (5%) Query: 126 GVDISCKALEIAKSNAVTNGVSE--RFDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179 G DI KA+EIA+SNA GV + RF+ + F E + +V+NPPY E ++ Sbjct: 282 GGDIDPKAVEIARSNAEKAGVDDVVRFEVADATRFHRSEP-YGRVVTNPPYGERIM 336 >gi|119482041|ref|XP_001261049.1| TAM domain methyltransferase, putative [Neosartorya fischeri NRRL 181] gi|119409203|gb|EAW19152.1| TAM domain methyltransferase, putative [Neosartorya fischeri NRRL 181] Length = 331 Score = 38.9 bits (89), Expect = 0.77, Method: Compositional matrix adjust. Identities = 30/90 (33%), Positives = 40/90 (44%), Gaps = 6/90 (6%) Query: 79 ELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAK 138 +LLV L + P + RILD+GTGTG L + + P + VG D+S A Sbjct: 76 KLLVGGDL-YRAPILNDGPPKRILDVGTGTGIWPLEMADDFPDAEIVGTDLSPIQPNWAP 134 Query: 139 SNAVTNGVSERFDTLQSDWFSSVEGLFDVI 168 N N D +SDW + FD I Sbjct: 135 PNCTFN-----VDDAESDWTFTPAEAFDYI 159 >gi|69245865|ref|ZP_00603682.1| Type I restriction-modification system M subunit [Enterococcus faecium DO] gi|257879183|ref|ZP_05658836.1| type I restriction-modification system M subunit [Enterococcus faecium 1,230,933] gi|257881998|ref|ZP_05661651.1| type I restriction-modification system M subunit [Enterococcus faecium 1,231,502] gi|257890013|ref|ZP_05669666.1| type I restriction-modification system M subunit [Enterococcus faecium 1,231,410] gi|260560170|ref|ZP_05832347.1| type I restriction-modification system M subunit [Enterococcus faecium C68] gi|293560248|ref|ZP_06676747.1| type I restriction-modification system, M subunit [Enterococcus faecium E1162] gi|294620836|ref|ZP_06700040.1| type I restriction-modification system, M subunit [Enterococcus faecium U0317] gi|314947719|ref|ZP_07851126.1| type I restriction-modification system, M subunit [Enterococcus faecium TX0082] gi|68195567|gb|EAN10009.1| Type I restriction-modification system M subunit [Enterococcus faecium DO] gi|257813411|gb|EEV42169.1| type I restriction-modification system M subunit [Enterococcus faecium 1,230,933] gi|257817656|gb|EEV44984.1| type I restriction-modification system M subunit [Enterococcus faecium 1,231,502] gi|257826373|gb|EEV52999.1| type I restriction-modification system M subunit [Enterococcus faecium 1,231,410] gi|260073737|gb|EEW62062.1| type I restriction-modification system M subunit [Enterococcus faecium C68] gi|291599621|gb|EFF30634.1| type I restriction-modification system, M subunit [Enterococcus faecium U0317] gi|291605792|gb|EFF35227.1| type I restriction-modification system, M subunit [Enterococcus faecium E1162] gi|313645699|gb|EFS10279.1| type I restriction-modification system, M subunit [Enterococcus faecium TX0082] Length = 530 Score = 38.9 bits (89), Expect = 0.77, Method: Compositional matrix adjust. Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 9/90 (10%) Query: 94 EKRDVVRILDLGTGTGAVCLAL---LKESPFFKGVGVDISCKALEIAKSNAVTNGV-SER 149 ++R + D G+G++ L + L K G +++ +AK N + +GV +E Sbjct: 215 KERRFFSVFDPTMGSGSLMLNVRNYLTHPDNVKYHGQELNTTTYNLAKMNLILHGVDAEE 274 Query: 150 F-----DTLQSDWFSSVEGLFDVIVSNPPY 174 DTL DW + FD +V NPPY Sbjct: 275 MNLRNGDTLNKDWPTDEPYTFDAVVMNPPY 304 >gi|328474212|gb|EGF45017.1| ribosomal RNA small subunit methyltransferase C [Vibrio parahaemolyticus 10329] Length = 341 Score = 38.9 bits (89), Expect = 0.78, Method: Compositional matrix adjust. Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 2/75 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LD G G G + + K +P DI+ A+ +++ NG+S R SD +S Sbjct: 203 KVLDFGCGAGVLGAFMAKANPEIAIEMCDINAYAITSSQATLEANGLSGR--VFASDIYS 260 Query: 160 SVEGLFDVIVSNPPY 174 + I+SNPP+ Sbjct: 261 DTANDYRFIISNPPF 275 >gi|167751246|ref|ZP_02423373.1| hypothetical protein EUBSIR_02232 [Eubacterium siraeum DSM 15702] gi|167655753|gb|EDR99882.1| hypothetical protein EUBSIR_02232 [Eubacterium siraeum DSM 15702] Length = 376 Score = 38.9 bits (89), Expect = 0.78, Method: Compositional matrix adjust. Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 3/68 (4%) Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW--FSSVEGLFDVIVSN 171 A +++ FK G DI +A+ + + NAV GV E + Q D F+ EG V++ N Sbjct: 244 ANIRKPENFKLYGFDIDPEAVRLTRDNAVKAGVGEYIEVKQRDVADFTYPEGC-TVVLCN 302 Query: 172 PPYIESVI 179 PPY E ++ Sbjct: 303 PPYGERML 310 >gi|153838411|ref|ZP_01991078.1| ribosomal RNA small subunit methyltransferase C (rRNA(guanine-N(2)-)-methyltransferase) [Vibrio parahaemolyticus AQ3810] gi|149748218|gb|EDM59077.1| ribosomal RNA small subunit methyltransferase C (rRNA(guanine-N(2)-)-methyltransferase) [Vibrio parahaemolyticus AQ3810] Length = 341 Score = 38.9 bits (89), Expect = 0.78, Method: Compositional matrix adjust. Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 2/75 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LD G G G + + K +P DI+ A+ +++ NG+S R SD +S Sbjct: 203 KVLDFGCGAGVLGAFMAKANPEIAIEMCDINAYAITSSQATLEANGLSGR--VFASDIYS 260 Query: 160 SVEGLFDVIVSNPPY 174 + I+SNPP+ Sbjct: 261 DTANDYRFIISNPPF 275 >gi|90415971|ref|ZP_01223904.1| possible methyltransferase [marine gamma proteobacterium HTCC2207] gi|90332345|gb|EAS47542.1| possible methyltransferase [marine gamma proteobacterium HTCC2207] Length = 260 Score = 38.9 bits (89), Expect = 0.78, Method: Compositional matrix adjust. Identities = 29/89 (32%), Positives = 51/89 (57%), Gaps = 5/89 (5%) Query: 86 LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145 L +LP +E + +RILD+G G G + +AL K + V D+S + LE+A+ A+ G Sbjct: 38 LLAALPDLEIQAPLRILDIGGGLGQLTVALAKLG--HQVVYNDLSQQMLEVAQKLALEEG 95 Query: 146 VSERFDTLQSDWFS-SVEGL--FDVIVSN 171 V ++ Q + + +GL FD+++S+ Sbjct: 96 VMDKIIWCQQPYQTLKDQGLERFDLVMSH 124 >gi|84617327|emb|CAI94687.1| hypothetical protein [Streptomyces achromogenes subsp. rubradiris] Length = 331 Score = 38.9 bits (89), Expect = 0.78, Method: Compositional matrix adjust. Identities = 21/51 (41%), Positives = 30/51 (58%), Gaps = 2/51 (3%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150 R+LD+G GTG V AL+ + VG+D + A+EIA+ A G+ RF Sbjct: 174 RVLDVGCGTGEV--ALMAAALGLPTVGIDPASTAIEIARRKAEERGLQARF 222 >gi|56421054|ref|YP_148372.1| hypothetical protein GK2519 [Geobacillus kaustophilus HTA426] gi|56380896|dbj|BAD76804.1| hypothetical conserved protein [Geobacillus kaustophilus HTA426] Length = 247 Score = 38.9 bits (89), Expect = 0.78, Method: Compositional matrix adjust. Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 5/80 (6%) Query: 89 SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148 + + KR R++D+G GTG + + L K ++ GVD+S L +A++ A GV Sbjct: 29 AFAQYTKRPGRRVIDIGCGTGELAIRLAKAG--WQVSGVDLSEHMLAVAQAKAEAEGVEV 86 Query: 149 RF---DTLQSDWFSSVEGLF 165 F + + D FS ++G F Sbjct: 87 PFFEQNMAELDGFSDLDGAF 106 >gi|313679089|ref|YP_004056828.1| rRNA (guanine-n(2)-)-methyltransferase [Oceanithermus profundus DSM 14977] gi|313151804|gb|ADR35655.1| rRNA (guanine-N(2)-)-methyltransferase [Oceanithermus profundus DSM 14977] Length = 381 Score = 38.9 bits (89), Expect = 0.78, Method: Compositional matrix adjust. Identities = 25/80 (31%), Positives = 43/80 (53%), Gaps = 4/80 (5%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 R+L+L G + L F VD+S AL A+ NA NG++ER + +++D F Sbjct: 207 ARVLNLFAYNGGFSVYALAGGAAF-ARSVDVSEGALADARENARLNGLAERHEAVRADVF 265 Query: 159 ---SSVEGLFDVIVSNPPYI 175 ++ E +D++V +PP + Sbjct: 266 EFLNAHEETYDLVVLDPPAL 285 >gi|307298996|ref|ZP_07578798.1| methyltransferase small [Thermotogales bacterium mesG1.Ag.4.2] gi|306915421|gb|EFN45806.1| methyltransferase small [Thermotogales bacterium mesG1.Ag.4.2] Length = 225 Score = 38.9 bits (89), Expect = 0.78, Method: Compositional matrix adjust. Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 5/80 (6%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE--RFDTLQ-SD 156 R L+LG G+G + + L K + GV++ + +A NA NGV RF D Sbjct: 46 RALELGAGSGVISIYLAKNFGL-EVTGVEVDRELHAVATKNASLNGVENLTRFVNCDIDD 104 Query: 157 WFSSVEG-LFDVIVSNPPYI 175 + ++ G +FD++VSNPP+ Sbjct: 105 YAANNRGEVFDMVVSNPPHF 124 >gi|257900171|ref|ZP_05679824.1| type I restriction-modification system M subunit [Enterococcus faecium Com15] gi|293379346|ref|ZP_06625491.1| type I restriction-modification system, M subunit [Enterococcus faecium PC4.1] gi|257838083|gb|EEV63157.1| type I restriction-modification system M subunit [Enterococcus faecium Com15] gi|292642038|gb|EFF60203.1| type I restriction-modification system, M subunit [Enterococcus faecium PC4.1] Length = 531 Score = 38.9 bits (89), Expect = 0.78, Method: Compositional matrix adjust. Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 9/90 (10%) Query: 94 EKRDVVRILDLGTGTGAVCLAL---LKESPFFKGVGVDISCKALEIAKSNAVTNGV-SER 149 ++R + D G+G++ L + L K G +++ +AK N + +GV +E Sbjct: 215 KERRFFSVFDPTMGSGSLMLNVRNYLTHPDNVKYHGQELNTTTYNLAKMNLILHGVDAEE 274 Query: 150 F-----DTLQSDWFSSVEGLFDVIVSNPPY 174 DTL DW + FD +V NPPY Sbjct: 275 MNLRNGDTLNKDWPTDEPYTFDAVVMNPPY 304 >gi|251788690|ref|YP_003003411.1| methyltransferase small [Dickeya zeae Ech1591] gi|247537311|gb|ACT05932.1| methyltransferase small [Dickeya zeae Ech1591] Length = 265 Score = 38.9 bits (89), Expect = 0.78, Method: Compositional matrix adjust. Identities = 30/94 (31%), Positives = 46/94 (48%), Gaps = 5/94 (5%) Query: 93 IEKRDVVRILDLGTGTGAVCLALLKESPF-FKGVGVDISCKALEIAKSNAVTNGVSERFD 151 + R+ RILD+G G+G + L L + S F GV++ A A NA + ++ Sbjct: 54 VPLREETRILDIGCGSGLLGLMLAQRSGGRFPIDGVELDAAASTQAADNAAASPWADCIR 113 Query: 152 TLQSD---WFSSVEGLFDVIVSNPPYIESVIVDC 182 +D + + + +IVSNPPY S VDC Sbjct: 114 IYPADIVGYAQTATRRYSLIVSNPPYF-SPGVDC 146 >gi|238852660|ref|ZP_04643070.1| ribosomal protein L11 methyltransferase [Lactobacillus gasseri 202-4] gi|238834806|gb|EEQ27033.1| ribosomal protein L11 methyltransferase [Lactobacillus gasseri 202-4] Length = 315 Score = 38.9 bits (89), Expect = 0.78, Method: Compositional matrix adjust. Identities = 40/166 (24%), Positives = 78/166 (46%), Gaps = 29/166 (17%) Query: 56 GWRDFYNV-------RLTLSSDTFEPR-PETELL-VDSALAFS----------LPRIEKR 96 W+ +Y+V + + + P P+ +L+ +D LAF L +E+ Sbjct: 115 AWQKYYHVIDFSRHLAIVPEWEDYHPAFPDQKLIRLDPGLAFGTGGHTTTQLVLLAMERA 174 Query: 97 DV--VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154 V + +LD+GTG+G + +A K +G DIS +A+ AK N N V+ + + Sbjct: 175 LVKPMSVLDIGTGSGILAIAASKLGASHV-LGTDISDEAVTAAKENIALNDVN-NINVRK 232 Query: 155 SDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200 ++ ++ +D+IV+N ++ D L + D D ++ +G + Sbjct: 233 ANLLKDIDDKYDLIVAN------ILADILLELIPDLDSHLNKEGKV 272 >gi|228905831|ref|ZP_04069729.1| hypothetical protein bthur0013_230 [Bacillus thuringiensis IBL 200] gi|228853771|gb|EEM98530.1| hypothetical protein bthur0013_230 [Bacillus thuringiensis IBL 200] Length = 246 Score = 38.9 bits (89), Expect = 0.78, Method: Compositional matrix adjust. Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 5/81 (6%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LDL TG V L LL K GV+I + ++ + NG+ ER + D Sbjct: 48 LLDLCTGNAVVPL-LLSTRTKGKITGVEIQERLYDMGVRSVQYNGLEERIHLIHGDLKDM 106 Query: 161 VEGL----FDVIVSNPPYIES 177 E L +DV+ NPPY ++ Sbjct: 107 PEKLGRHQYDVVTCNPPYFQT 127 >gi|218296340|ref|ZP_03497083.1| ribosomal L11 methyltransferase [Thermus aquaticus Y51MC23] gi|218243134|gb|EED09665.1| ribosomal L11 methyltransferase [Thermus aquaticus Y51MC23] Length = 252 Score = 38.9 bits (89), Expect = 0.78, Method: Compositional matrix adjust. Identities = 22/51 (43%), Positives = 31/51 (60%), Gaps = 2/51 (3%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150 R+LD+GTG+G LA+ E K +GVD+ L A++NA NGV +F Sbjct: 123 RVLDVGTGSG--ILAIAAEKLGGKALGVDVDPSVLPQAEANARRNGVYPQF 171 >gi|146309213|ref|YP_001189678.1| SAM-dependent methyltransferase [Pseudomonas mendocina ymp] gi|145577414|gb|ABP86946.1| SAM-dependent methyltransferase [Pseudomonas mendocina ymp] Length = 399 Score = 38.9 bits (89), Expect = 0.78, Method: Compositional matrix adjust. Identities = 42/142 (29%), Positives = 65/142 (45%), Gaps = 35/142 (24%) Query: 100 RILDLGT--GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 R+LDL + G V A S F VD S AL+ + NA NG +E+ ++ D Sbjct: 224 RVLDLFSYIGGWGVQAAAFGASEVF---CVDASGFALDGVERNATLNGFAEKITCVEGDV 280 Query: 158 FS------SVEGLFDVIVSNPP-YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210 F+ S E FDV++++PP +I+ R D + +G + YR + Sbjct: 281 FAALRELKSAEERFDVVIADPPAFIK-----------RKKDIK-------NGEAAYRRLN 322 Query: 211 DGVSRHLNKDGL-----CSVEI 227 + R LNKDG+ CS+ + Sbjct: 323 EIAMRLLNKDGILVSASCSMHL 344 >gi|330812398|ref|YP_004356860.1| hypothetical protein PSEBR_a5353 [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327380506|gb|AEA71856.1| Conserved hypothetical protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 398 Score = 38.9 bits (89), Expect = 0.79, Method: Compositional matrix adjust. Identities = 42/142 (29%), Positives = 65/142 (45%), Gaps = 35/142 (24%) Query: 100 RILDLGT--GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 R+LDL + G V A S F VD S AL+ + NA NG +E+ ++ D Sbjct: 223 RVLDLFSYIGGWGVQAAAFGASEVF---CVDASAFALDGVERNAALNGFAEKLTCIEGDV 279 Query: 158 FSSVEGL------FDVIVSNPP-YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210 F +++ L FDVIV++PP +I+ R D + +G YR + Sbjct: 280 FEALKELKASEERFDVIVADPPAFIK-----------RKKDLK-------NGEGAYRRLN 321 Query: 211 DGVSRHLNKDGL-----CSVEI 227 + R L+KDG+ CS+ + Sbjct: 322 EQAMRLLSKDGILVSASCSMHL 343 >gi|309791823|ref|ZP_07686310.1| methyltransferase small [Oscillochloris trichoides DG6] gi|308226145|gb|EFO79886.1| methyltransferase small [Oscillochloris trichoides DG6] Length = 195 Score = 38.9 bits (89), Expect = 0.79, Method: Compositional matrix adjust. Identities = 34/104 (32%), Positives = 47/104 (45%), Gaps = 9/104 (8%) Query: 71 TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130 +FE T+LL+ S P+ RILDLG G G + + + + P V D Sbjct: 32 SFEIDDGTDLLLRSVEPAITPQ-------RILDLGCGCGVIAITMAQRFPEAAVVAADKD 84 Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPP 173 A+ A++NA N V L S SV G +D+I SN P Sbjct: 85 LLAVRYARANAQLNAVPH-VQILGSVGLESVPAGPYDLIFSNIP 127 >gi|296241773|ref|YP_003649260.1| methyltransferase small [Thermosphaera aggregans DSM 11486] gi|296094357|gb|ADG90308.1| methyltransferase small [Thermosphaera aggregans DSM 11486] Length = 160 Score = 38.9 bits (89), Expect = 0.79, Method: Compositional matrix adjust. Identities = 39/113 (34%), Positives = 54/113 (47%), Gaps = 21/113 (18%) Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 +DLG+GTG V LL V VD+ AL +K N +S R T+ +SV Sbjct: 3 VDLGSGTGIVGSHLLSNGYCELAVLVDVMEDALTSSKMTLEVNNLSSRGITI-----TSV 57 Query: 162 EGL----FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210 E L D++VSNPPY+ + + D I+ +GG+ G Y TIA Sbjct: 58 EALGDGSVDMVVSNPPYLPA-------HAPSEID--IATEGGVKG---YETIA 98 >gi|262405018|ref|ZP_06081570.1| ribosomal protein L11 methyltransferase [Vibrio sp. RC586] gi|262348857|gb|EEY97998.1| ribosomal protein L11 methyltransferase [Vibrio sp. RC586] Length = 295 Score = 38.9 bits (89), Expect = 0.79, Method: Compositional matrix adjust. Identities = 35/113 (30%), Positives = 57/113 (50%), Gaps = 19/113 (16%) Query: 74 PRPET-ELLVDSALAFS----------LPRIEKRDVV--RILDLGTGTGAVCLALLKESP 120 P P+ +++D LAF L ++ D+ ++D G G+G + +A +K Sbjct: 123 PDPQAVNVMLDPGLAFGTGTHPTTALCLEWLDNLDLTGKTVIDFGCGSGILAIAAIKLG- 181 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFSSVEGLF-DVIVSN 171 K +G+DI +AL +K NA NGV ++ + L D EGL DV+V+N Sbjct: 182 AAKVIGIDIDPQALLASKDNAARNGVEDQIEVYLPKD---QPEGLLADVVVAN 231 >gi|149202837|ref|ZP_01879809.1| hypothetical protein RTM1035_09469 [Roseovarius sp. TM1035] gi|149144119|gb|EDM32153.1| hypothetical protein RTM1035_09469 [Roseovarius sp. TM1035] Length = 391 Score = 38.9 bits (89), Expect = 0.79, Method: Compositional matrix adjust. Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 6/53 (11%) Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPP 173 VD S AL +A A G++ERF+T + D F +E L FDV++ +PP Sbjct: 246 VDGSDPALGLATQGAARMGLAERFETRRGDAFDVMEALAAEGAQFDVVICDPP 298 >gi|153814681|ref|ZP_01967349.1| hypothetical protein RUMTOR_00896 [Ruminococcus torques ATCC 27756] gi|145848175|gb|EDK25093.1| hypothetical protein RUMTOR_00896 [Ruminococcus torques ATCC 27756] Length = 458 Score = 38.9 bits (89), Expect = 0.79, Method: Compositional matrix adjust. Identities = 29/77 (37%), Positives = 44/77 (57%), Gaps = 8/77 (10%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 + DL +GTG + AL +P K V GV+I +A+E AK NA NG+S + + D F Sbjct: 317 VFDLFSGTGTISQAL---APVAKKVIGVEIVEEAVEAAKENAERNGLS-NCEFIAGDVFE 372 Query: 160 SVEGLF---DVIVSNPP 173 ++ + DVI+ +PP Sbjct: 373 VLDDIKEKPDVIILDPP 389 >gi|327384000|gb|AEA55475.1| type I restriction modification system protein [Lactobacillus casei LC2W] gi|327387192|gb|AEA58665.1| type I restriction modification system protein [Lactobacillus casei BD-II] Length = 538 Score = 38.9 bits (89), Expect = 0.80, Method: Compositional matrix adjust. Identities = 25/86 (29%), Positives = 40/86 (46%), Gaps = 9/86 (10%) Query: 98 VVRILDLGTGTGAVCLAL---LKESPFFKGVGVDISCKALEIAKSNAVTNGVS------E 148 V I D G+G++ L + +++ G +++ +A+ N + +GVS Sbjct: 232 VRTIYDPAVGSGSLLLNVGQHVQDPNLVSYHGQELNTTTYNLARMNLMLHGVSYDDMHLR 291 Query: 149 RFDTLQSDWFSSVEGLFDVIVSNPPY 174 DTL DW LFD +V NPPY Sbjct: 292 NGDTLSKDWPVDEPYLFDAVVMNPPY 317 >gi|304311684|ref|YP_003811282.1| Ribosomal RNA small subunit methyltransferase C [gamma proteobacterium HdN1] gi|301797417|emb|CBL45637.1| Ribosomal RNA small subunit methyltransferase C [gamma proteobacterium HdN1] Length = 329 Score = 38.9 bits (89), Expect = 0.80, Method: Compositional matrix adjust. Identities = 32/124 (25%), Positives = 55/124 (44%), Gaps = 9/124 (7%) Query: 58 RDFYNVRLTLSSD--TFEPRP-----ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110 RD++ +RL D F +P E LA P++ ++ R+LDLG G G Sbjct: 138 RDYHRLRLIGEEDGLQFYSKPGQFGWEKIDAGSQLLASCFPQLFQQSPGRVLDLGCGYGY 197 Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170 + L + + P + D + AL + N + + + + D + GLFD ++ Sbjct: 198 LSLQVSRYHPS-QITATDNNSAALLSCRFNFQFHHI-HYGNVIADDCARQITGLFDTVIC 255 Query: 171 NPPY 174 NPP+ Sbjct: 256 NPPF 259 >gi|257466750|ref|ZP_05631061.1| methyltransferase [Fusobacterium gonidiaformans ATCC 25563] gi|315917899|ref|ZP_07914139.1| methyltransferase [Fusobacterium gonidiaformans ATCC 25563] gi|313691774|gb|EFS28609.1| methyltransferase [Fusobacterium gonidiaformans ATCC 25563] Length = 393 Score = 38.9 bits (89), Expect = 0.80, Method: Compositional matrix adjust. Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 7/81 (8%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 R LD+ + +G +A L++ + + +D ALE+ + N N F T++ D F Sbjct: 218 TRFLDVFSSSGGFSMAALRDGAR-EVIAIDKDAHALELCRENYELNHFQSNFSTMEGDAF 276 Query: 159 SSVEGL------FDVIVSNPP 173 +E L FD+I +PP Sbjct: 277 LLLETLGGRKEKFDIITLDPP 297 >gi|255074075|ref|XP_002500712.1| predicted protein [Micromonas sp. RCC299] gi|226515975|gb|ACO61970.1| predicted protein [Micromonas sp. RCC299] Length = 455 Score = 38.9 bits (89), Expect = 0.80, Method: Compositional matrix adjust. Identities = 38/124 (30%), Positives = 54/124 (43%), Gaps = 22/124 (17%) Query: 75 RPETELLVDSALAFSLPRIEKRDVVRILDLG----------TGTGAVCLALLKESPFFKG 124 R E +L F + + + R VR L G TG A+ AL + Sbjct: 246 RYEVDLTKGHKTGFYVDQRDNRAEVRALGAGKKRVLDVCCYTGGFAINAALGGAADV--- 302 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---------GLFDVIVSNPPYI 175 GVD S AL+IA+ NA NGV R +QS+ F ++ G FD+IV +PP + Sbjct: 303 TGVDSSPLALDIARRNADVNGVGARTTFVQSEAFKYLDDLVADSGNLGTFDMIVLDPPKL 362 Query: 176 ESVI 179 + Sbjct: 363 APSV 366 >gi|121710632|ref|XP_001272932.1| S-adenosylmethionine-dependent methyltransferase, putative [Aspergillus clavatus NRRL 1] gi|119401082|gb|EAW11506.1| S-adenosylmethionine-dependent methyltransferase, putative [Aspergillus clavatus NRRL 1] Length = 348 Score = 38.9 bits (89), Expect = 0.80, Method: Compositional matrix adjust. Identities = 22/40 (55%), Positives = 31/40 (77%), Gaps = 3/40 (7%) Query: 101 ILDLGTGTGAVCLALLKESPFFKG--VGVDISCKALEIAK 138 ILDLGTG G++ LALL++ FKG VGVD S +++E+A+ Sbjct: 106 ILDLGTGNGSM-LALLRKRGGFKGVMVGVDYSARSVELAR 144 >gi|254786393|ref|YP_003073822.1| type I restriction-modification system, M subunit [Teredinibacter turnerae T7901] gi|237686117|gb|ACR13381.1| type I restriction-modification system, M subunit [Teredinibacter turnerae T7901] Length = 535 Score = 38.9 bits (89), Expect = 0.80, Method: Compositional matrix adjust. Identities = 30/124 (24%), Positives = 62/124 (50%), Gaps = 17/124 (13%) Query: 68 SSDTFEPRPETELLVD-SALAFSLPRI-EKRDVVRILDLGTGTGAVCLALLKE-SPFFKG 124 + + + P+P +++L + L P +K+ + ++LD G+G++ L + K+ P G Sbjct: 201 AGEFYTPQPISQILSEIVTLDSQEPATGKKKKIKQVLDFACGSGSLLLNVRKQLGPHGIG 260 Query: 125 --VGVDISCKALEIAKSNAVTNGVSE------RFDTLQSDW------FSSVEGLFDVIVS 170 G + + +A+ N + +GV + DTL++DW + + FD +V+ Sbjct: 261 KIYGQEKNITTYNLARMNMLLHGVKDTEFEIHHGDTLENDWDILNEMNPAKKMQFDAVVA 320 Query: 171 NPPY 174 NPP+ Sbjct: 321 NPPF 324 >gi|108801815|ref|YP_642012.1| putative methylase [Mycobacterium sp. MCS] gi|119870968|ref|YP_940920.1| putative methylase [Mycobacterium sp. KMS] gi|108772234|gb|ABG10956.1| Putative methylase [Mycobacterium sp. MCS] gi|119697057|gb|ABL94130.1| putative methylase [Mycobacterium sp. KMS] Length = 231 Score = 38.9 bits (89), Expect = 0.80, Method: Compositional matrix adjust. Identities = 36/110 (32%), Positives = 53/110 (48%), Gaps = 19/110 (17%) Query: 72 FEPRPETELLVDSALAFSLPRIEKRDVV---RILDLGTGTG--AVCLALLKESPFFKGVG 126 + P+ +++LLVD +EK + R +DL TG+G AV AL S Sbjct: 19 YAPQEDSQLLVDI--------MEKTGLAVGRRAVDLCTGSGVVAVNAALQGASSV---TA 67 Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYI 175 DI +A+ A+ NA+ GV D W +VE FD++ NPPY+ Sbjct: 68 FDICPRAVRCARGNALGAGVD--VDVHLGSWARAVEFDPFDLVTCNPPYV 115 >gi|28899251|ref|NP_798856.1| putative 16S rRNA m2G 1207 methyltransferase [Vibrio parahaemolyticus RIMD 2210633] gi|260362175|ref|ZP_05775165.1| ribosomal RNA small subunit methyltransferase C [Vibrio parahaemolyticus K5030] gi|260879053|ref|ZP_05891408.1| ribosomal RNA small subunit methyltransferase C [Vibrio parahaemolyticus AN-5034] gi|260895928|ref|ZP_05904424.1| ribosomal RNA small subunit methyltransferase C [Vibrio parahaemolyticus Peru-466] gi|260903439|ref|ZP_05911834.1| ribosomal RNA small subunit methyltransferase C [Vibrio parahaemolyticus AQ4037] gi|81726990|sp|Q87LY1|RSMC_VIBPA RecName: Full=Ribosomal RNA small subunit methyltransferase C; AltName: Full=16S rRNA m2G1207 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rsmC gi|28807475|dbj|BAC60740.1| putative 16S rRNA m2G 1207 methyltransferase [Vibrio parahaemolyticus RIMD 2210633] gi|308085366|gb|EFO35061.1| ribosomal RNA small subunit methyltransferase C [Vibrio parahaemolyticus Peru-466] gi|308089537|gb|EFO39232.1| ribosomal RNA small subunit methyltransferase C [Vibrio parahaemolyticus AN-5034] gi|308106585|gb|EFO44125.1| ribosomal RNA small subunit methyltransferase C [Vibrio parahaemolyticus AQ4037] gi|308111050|gb|EFO48590.1| ribosomal RNA small subunit methyltransferase C [Vibrio parahaemolyticus K5030] Length = 341 Score = 38.9 bits (89), Expect = 0.80, Method: Compositional matrix adjust. Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 2/75 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LD G G G + + K +P DI+ A+ +++ NG+S R SD +S Sbjct: 203 KVLDFGCGAGVLGAFMAKANPEIAIEMCDINAYAITSSQATLEANGLSGR--VFASDIYS 260 Query: 160 SVEGLFDVIVSNPPY 174 + I+SNPP+ Sbjct: 261 DTANDYRFIISNPPF 275 >gi|254292788|ref|YP_003058811.1| ribosomal L11 methyltransferase [Hirschia baltica ATCC 49814] gi|254041319|gb|ACT58114.1| ribosomal L11 methyltransferase [Hirschia baltica ATCC 49814] Length = 313 Score = 38.9 bits (89), Expect = 0.81, Method: Compositional matrix adjust. Identities = 23/82 (28%), Positives = 43/82 (52%), Gaps = 5/82 (6%) Query: 94 EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153 +KR + ++LD+GTG+ + +A +K V DI +++ IAK NA N + L Sbjct: 141 KKRKLGKVLDIGTGSAVLAIAAMKSGASM-AVASDIDPESIRIAKINAENNKMGRNLHLL 199 Query: 154 ----QSDWFSSVEGLFDVIVSN 171 ++ F +G +D +++N Sbjct: 200 VATGANNAFIRNQGKYDTVMAN 221 >gi|258569605|ref|XP_002543606.1| predicted protein [Uncinocarpus reesii 1704] gi|237903876|gb|EEP78277.1| predicted protein [Uncinocarpus reesii 1704] Length = 362 Score = 38.9 bits (89), Expect = 0.81, Method: Compositional matrix adjust. Identities = 39/123 (31%), Positives = 52/123 (42%), Gaps = 44/123 (35%) Query: 100 RILDLGTGTGAVCL---ALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSERF----- 150 RILDL TGTG + L +LL S P VG+DIS KAL +A+ N N E Sbjct: 104 RILDLCTGTGCIPLLLHSLLAPSIPNLTIVGIDISPKALNLARRNLDYNISREHLLPRAK 163 Query: 151 ---DTLQSDWF------------SSVEGL--------------------FDVIVSNPPYI 175 LQ++ ++V GL +DV++SNPPYI Sbjct: 164 QDVHFLQANVLHDEETQRLNGVATTVPGLPTVLLDFPPAEANSGAKNADWDVLISNPPYI 223 Query: 176 ESV 178 + Sbjct: 224 STA 226 >gi|297619901|ref|YP_003708006.1| methylase [Methanococcus voltae A3] gi|297378878|gb|ADI37033.1| methylase [Methanococcus voltae A3] Length = 223 Score = 38.9 bits (89), Expect = 0.81, Method: Compositional matrix adjust. Identities = 42/155 (27%), Positives = 68/155 (43%), Gaps = 20/155 (12%) Query: 83 DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142 DS L F+ + K V LD+GTG+G L+ K + +GVDI+ A++ + N Sbjct: 26 DSELLFNNLKDVKNKTV--LDVGTGSGIQALSAFKNGADY-VLGVDINPYAIKTSYDNLK 82 Query: 143 TNGVSERFDTLQ--------SDWFSSVE----GLFDVIVSNPPYIESVIVDCLGLEVRDF 190 N E + L+ SD F ++ FDVI+ N PY+ + + L + Sbjct: 83 LNFNIENSNNLETLKIRFLYSDLFENITKSKIKKFDVILFNAPYLPTSEDEKLEKYL--- 139 Query: 191 DPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225 + DGG DG + ++L K G+ + Sbjct: 140 --NYAFDGGSDGRKVLDKFIKELPKYLKKGGVVKI 172 >gi|20807438|ref|NP_622609.1| ribosomal protein L11 methyltransferase [Thermoanaerobacter tengcongensis MB4] gi|38605369|sp|Q8RB66|PRMA_THETN RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11 Mtase gi|20515962|gb|AAM24213.1| Ribosomal protein L11 methylase [Thermoanaerobacter tengcongensis MB4] Length = 309 Score = 38.9 bits (89), Expect = 0.81, Method: Compositional matrix adjust. Identities = 31/107 (28%), Positives = 52/107 (48%), Gaps = 12/107 (11%) Query: 96 RDVVR----ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151 D+V+ + D+G G+G + +A K + G D+ A++IA+ N NG+ E + Sbjct: 168 EDIVKPGAIVFDVGCGSGILSIAASKLGASYV-YGADVDEMAVKIARENVKLNGL-ENVE 225 Query: 152 TLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG 198 QSD + G DVIV+N +I D + + D P + +G Sbjct: 226 IFQSDLLKNFRGKADVIVAN------IIADAIIRLIPDVLPHLKEEG 266 >gi|87301259|ref|ZP_01084100.1| possible methyltransferase [Synechococcus sp. WH 5701] gi|87284227|gb|EAQ76180.1| possible methyltransferase [Synechococcus sp. WH 5701] Length = 441 Score = 38.9 bits (89), Expect = 0.81, Method: Compositional matrix adjust. Identities = 33/93 (35%), Positives = 46/93 (49%), Gaps = 6/93 (6%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 V SA LP E VR+LD G GTG L +P + + VDIS ALE+A+ Sbjct: 78 VSSACTGRLP--EAGPPVRLLDAGCGTGVSTDYLAHLNPGAEILAVDISAGALEVARERL 135 Query: 142 VTNGVSERFDTLQSDWFSSV----EGLFDVIVS 170 +G + +L+ + S + EG FD+I S Sbjct: 136 RRSGGARHCSSLRLEQRSLLELDGEGPFDLINS 168 >gi|315648620|ref|ZP_07901717.1| type I restriction-modification system, M subunit [Paenibacillus vortex V453] gi|315275999|gb|EFU39347.1| type I restriction-modification system, M subunit [Paenibacillus vortex V453] Length = 530 Score = 38.9 bits (89), Expect = 0.82, Method: Compositional matrix adjust. Identities = 24/90 (26%), Positives = 41/90 (45%), Gaps = 9/90 (10%) Query: 94 EKRDVVRILDLGTGTGAVCLAL---LKESPFFKGVGVDISCKALEIAKSNAVTNGVSER- 149 E + + + D G+G++ L + L K G +++ +AK N + +GV + Sbjct: 214 EDKKLFSVFDPTMGSGSLMLNVRNYLNHPDNVKYHGQELNTTTYNLAKMNLILHGVDKED 273 Query: 150 -----FDTLQSDWFSSVEGLFDVIVSNPPY 174 DTL DW + FD ++ NPPY Sbjct: 274 MRLRNGDTLNKDWPTDEPYTFDSVLMNPPY 303 >gi|257452885|ref|ZP_05618184.1| methyltransferase [Fusobacterium sp. 3_1_5R] gi|317059427|ref|ZP_07923912.1| methyltransferase [Fusobacterium sp. 3_1_5R] gi|313685103|gb|EFS21938.1| methyltransferase [Fusobacterium sp. 3_1_5R] Length = 393 Score = 38.9 bits (89), Expect = 0.82, Method: Compositional matrix adjust. Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 7/81 (8%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 R LD+ + +G +A L++ + + +D ALE+ + N N F T++ D F Sbjct: 218 TRFLDVFSSSGGFSMAALRDGAR-EVIAIDKDAHALELCRENYELNHFQSNFSTMEGDAF 276 Query: 159 SSVEGL------FDVIVSNPP 173 +E L FD+I +PP Sbjct: 277 LLLETLGGRKEKFDIITLDPP 297 >gi|271964972|ref|YP_003339168.1| rRNA (guanine-N(2)-)-methyltransferase [Streptosporangium roseum DSM 43021] gi|270508147|gb|ACZ86425.1| rRNA (guanine-N(2)-)-methyltransferase [Streptosporangium roseum DSM 43021] Length = 384 Score = 38.9 bits (89), Expect = 0.82, Method: Compositional matrix adjust. Identities = 29/90 (32%), Positives = 49/90 (54%), Gaps = 8/90 (8%) Query: 89 SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN---G 145 +LPR +R R++DLG G G V +A +P + + +D S +A+ A++ N G Sbjct: 233 NLPR--RRGPERVVDLGCGNGVVGVAAALANPEAEVMFIDESYQAVASAEATFRANAGAG 290 Query: 146 VSERFDTLQSDWFSSVE-GLFDVIVSNPPY 174 + RF + D S V G D++++NPP+ Sbjct: 291 TTARF--VVGDGLSGVPAGTVDLVLNNPPF 318 >gi|71734107|ref|YP_273308.1| ribosomal RNA small subunit methyltransferase C [Pseudomonas syringae pv. phaseolicola 1448A] gi|123637922|sp|Q48MR4|RSMC_PSE14 RecName: Full=Ribosomal RNA small subunit methyltransferase C; AltName: Full=16S rRNA m2G1207 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rsmC gi|71554660|gb|AAZ33871.1| ribosomal RNA small subunit methyltransferase C [Pseudomonas syringae pv. phaseolicola 1448A] Length = 332 Score = 38.9 bits (89), Expect = 0.82, Method: Compositional matrix adjust. Identities = 27/105 (25%), Positives = 45/105 (42%), Gaps = 2/105 (1%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 +D A L I+K +LD G GTG + A+ + P + +D+ A ++ Sbjct: 176 LDRGSALLLENIDKLPSGNLLDFGCGTGVLGAAVKRRYPHNDVIMLDVDAFATASSRLTL 235 Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLE 186 NG+ + L D + + I+SNPP+ V D + E Sbjct: 236 AANGLQAQ--VLTGDGIDAAPMGLNTILSNPPFHVGVHTDYMATE 278 >gi|89097040|ref|ZP_01169931.1| YefA [Bacillus sp. NRRL B-14911] gi|89088420|gb|EAR67530.1| YefA [Bacillus sp. NRRL B-14911] Length = 458 Score = 38.9 bits (89), Expect = 0.82, Method: Compositional matrix adjust. Identities = 35/121 (28%), Positives = 64/121 (52%), Gaps = 17/121 (14%) Query: 62 NVRLTLSSDTF-EPRPE-TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119 +++ +S+ +F + PE T++L + AL ++ E+ ++D G G + L L +++ Sbjct: 276 DIKFAISARSFYQVNPEQTKVLYEKALEYADLSGEES----VIDAYCGIGTISLFLAQKA 331 Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSE------RFDTLQSDWFSSVEG-LFDVIVSNP 172 K GV+I +A+E AK NA NG++ + + DW+ EG DV+V +P Sbjct: 332 K--KVFGVEIVPEAIEDAKRNAALNGITNAEFAVGEAEKVIPDWYK--EGNQADVLVVDP 387 Query: 173 P 173 P Sbjct: 388 P 388 >gi|327400310|ref|YP_004341149.1| methylase [Archaeoglobus veneficus SNP6] gi|327315818|gb|AEA46434.1| methylase [Archaeoglobus veneficus SNP6] Length = 180 Score = 38.9 bits (89), Expect = 0.82, Method: Compositional matrix adjust. Identities = 38/155 (24%), Positives = 73/155 (47%), Gaps = 21/155 (13%) Query: 67 LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126 ++S+ + P ++ELL+++A+ E R +L++G G+G V + F + Sbjct: 1 MTSEVYPPSEDSELLLEAAMR------EIRLEDEVLEVGVGSGFVSERIKDLCRFL--IA 52 Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLE 186 DIS A+ +KS + + +++D + F +I+ NPPY+E + G Sbjct: 53 TDISPYAVRESKSKGI--------EVVRTDLCRGIRRKFTLILFNPPYLELSEKEKRG-- 102 Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221 D+ + ++DGG G+ D V L ++G Sbjct: 103 --DWLEK-AVDGGKGGIEVATRFLDEVKEVLAENG 134 >gi|228898788|ref|ZP_04063071.1| hypothetical protein bthur0014_230 [Bacillus thuringiensis IBL 4222] gi|228860813|gb|EEN05190.1| hypothetical protein bthur0014_230 [Bacillus thuringiensis IBL 4222] Length = 246 Score = 38.9 bits (89), Expect = 0.82, Method: Compositional matrix adjust. Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 5/81 (6%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LDL TG V L LL K GV+I + ++ + NG+ ER + D Sbjct: 48 LLDLCTGNAVVPL-LLSTRTKGKITGVEIQERLYDMGVRSVQYNGLKERIHLIHGDLKDM 106 Query: 161 VEGL----FDVIVSNPPYIES 177 E L +DV+ NPPY ++ Sbjct: 107 PEKLGRHQYDVVTCNPPYFQT 127 >gi|90579648|ref|ZP_01235457.1| 23S rRNA (uracil-5-)-methyltransferase [Vibrio angustum S14] gi|90439222|gb|EAS64404.1| 23S rRNA (uracil-5-)-methyltransferase [Vibrio angustum S14] Length = 384 Score = 38.9 bits (89), Expect = 0.82, Method: Compositional matrix adjust. Identities = 40/126 (31%), Positives = 59/126 (46%), Gaps = 11/126 (8%) Query: 75 RPETELLVDSALAFSLPRIEKRDVVRI-----LDLGTGTGAVCLALLKESPFFKGVGVDI 129 RP++ + +A SL KR V I DL G G L +E G++I Sbjct: 213 RPKSFFQTNPKVAESLYATAKRWVSEIKPTSMWDLFCGVGGFALHCAEEVEHV--TGIEI 270 Query: 130 SCKALEIAKSNAVTNGVSE-RFDTLQSDWFS-SVEGLFDVIVSNPPYIESVIVDCLGLEV 187 +A+E AK +A GV+ RF L S FS S E ++++ NPP I + L ++ Sbjct: 271 EPEAIESAKHSAEIMGVTNLRFAALDSTSFSQSNESAPELVLVNPP--RRGIGEQLCQQL 328 Query: 188 RDFDPR 193 DF P+ Sbjct: 329 NDFAPK 334 >gi|86156674|ref|YP_463459.1| 50S ribosomal protein L11P methyltransferase [Anaeromyxobacter dehalogenans 2CP-C] gi|85773185|gb|ABC80022.1| [LSU ribosomal protein L11P]-lysine N-methyltransferase [Anaeromyxobacter dehalogenans 2CP-C] Length = 287 Score = 38.9 bits (89), Expect = 0.82, Method: Compositional matrix adjust. Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 3/79 (3%) Query: 93 IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152 + R +LD+GTG+G + +A K + G D A+ +A+ NA NGV E Sbjct: 144 LAARPGASVLDVGTGSGLLAIAARKLG-AGRVTGNDNDPVAVAVARENAARNGVPEV--A 200 Query: 153 LQSDWFSSVEGLFDVIVSN 171 L ++ G FDV+V+N Sbjct: 201 LTEAALPAIGGAFDVVVAN 219 >gi|310790753|gb|EFQ26286.1| methyltransferase domain-containing protein [Glomerella graminicola M1.001] Length = 350 Score = 38.9 bits (89), Expect = 0.83, Method: Compositional matrix adjust. Identities = 26/78 (33%), Positives = 36/78 (46%), Gaps = 5/78 (6%) Query: 80 LLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKS 139 LL+D L + P E V R+LD+GTGTG L E P + GVD+S Sbjct: 78 LLLDDRLGVAPPCKEGAQVGRVLDVGTGTGIWALNFGDEHPEAEVYGVDLSPTLPGYVPP 137 Query: 140 NAVTNGVSERFDTLQSDW 157 N V+ D ++ +W Sbjct: 138 N-----VTFEIDDVEEEW 150 >gi|295839041|ref|ZP_06825974.1| methylase [Streptomyces sp. SPB74] gi|295827299|gb|EFG65338.1| methylase [Streptomyces sp. SPB74] Length = 218 Score = 38.9 bits (89), Expect = 0.83, Method: Compositional matrix adjust. Identities = 32/105 (30%), Positives = 47/105 (44%), Gaps = 9/105 (8%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 R+LDL TG+GA+ L D+S +A+ + NA +R L+ D Sbjct: 33 TRVLDLCTGSGALALLAALRGAHVSAT--DLSWRAVLSTRLNAAR--ARQRVRVLRGDLS 88 Query: 159 SSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202 V G FD++VSNPPY+ + RD ++ D G G Sbjct: 89 GPVRGQRFDLVVSNPPYVPAPGAP----RRRDHSAALAWDAGPGG 129 >gi|188527247|ref|YP_001909934.1| type I restriction enzyme M protein [Helicobacter pylori Shi470] gi|188143487|gb|ACD47904.1| type I restriction enzyme M protein [Helicobacter pylori Shi470] Length = 543 Score = 38.9 bits (89), Expect = 0.83, Method: Compositional matrix adjust. Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 21/96 (21%) Query: 94 EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD--------ISCKALEIAKSNAVTNG 145 E V+I D GTG + +AL + +G D IS K+L++ K N + N Sbjct: 226 EPTQSVKIYDPSAGTGTLLMALAHQ------IGTDSCTLYAQDISQKSLKMLKLNLILND 279 Query: 146 VSERF------DTLQSDWFSS-VEGLFDVIVSNPPY 174 ++ +TL + + S ++G D IVSNPP+ Sbjct: 280 LTHSLKYAIEGNTLTNPYHSKDLKGKMDYIVSNPPF 315 >gi|163756357|ref|ZP_02163471.1| hypothetical protein KAOT1_01874 [Kordia algicida OT-1] gi|161323709|gb|EDP95044.1| hypothetical protein KAOT1_01874 [Kordia algicida OT-1] Length = 430 Score = 38.9 bits (89), Expect = 0.83, Method: Compositional matrix adjust. Identities = 22/55 (40%), Positives = 30/55 (54%), Gaps = 6/55 (10%) Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPP 173 +DIS ALEIAKSNA N S + + + D F + L FD++V +PP Sbjct: 284 TSLDISAPALEIAKSNAKLNEFSGKHNIIVGDAFEELNHLAKAKQKFDIVVIDPP 338 >gi|300811169|ref|ZP_07091681.1| methyltransferase small domain protein [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|300497873|gb|EFK32883.1| methyltransferase small domain protein [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] Length = 200 Score = 38.9 bits (89), Expect = 0.84, Method: Compositional matrix adjust. Identities = 38/143 (26%), Positives = 68/143 (47%), Gaps = 14/143 (9%) Query: 34 QRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRP---ETELLVDSALAFSL 90 +++F N V +H + + G N+ LT + F + +L++ L L Sbjct: 3 EQYFTENPTVDHDEHHVNYHLNG----INLNLTTDAGVFSKNRVDYGSGVLIEQMLDQEL 58 Query: 91 PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150 P ILD+G G G + L K+ P + VD++ +A+++A+ NA N ++ Sbjct: 59 PG------GNILDVGCGYGPIGLFAAKKWPGRQVDMVDVNERAMDLARRNAAAN-GADNV 111 Query: 151 DTLQSDWFSSVEGLFDVIVSNPP 173 + SD + V G + +IV+NPP Sbjct: 112 NIFASDRYQEVSGQYAMIVTNPP 134 >gi|296314313|ref|ZP_06864254.1| ribosomal protein L11 methyltransferase [Neisseria polysaccharea ATCC 43768] gi|296838974|gb|EFH22912.1| ribosomal protein L11 methyltransferase [Neisseria polysaccharea ATCC 43768] Length = 295 Score = 38.9 bits (89), Expect = 0.84, Method: Compositional matrix adjust. Identities = 28/74 (37%), Positives = 39/74 (52%), Gaps = 11/74 (14%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDW 157 +LD G G+G + +A LK VGVDI +A+ +K NA N V +F D L Sbjct: 167 VLDYGCGSGILTIAALKLGAG-SAVGVDIDEQAIRASKDNAEQNNVDAQFFLPDGLP--- 222 Query: 158 FSSVEGLFDVIVSN 171 +G FDV+V+N Sbjct: 223 ----QGQFDVVVAN 232 >gi|262068284|ref|ZP_06027896.1| RNA methyltransferase, RsmD family [Fusobacterium periodonticum ATCC 33693] gi|291378022|gb|EFE85540.1| RNA methyltransferase, RsmD family [Fusobacterium periodonticum ATCC 33693] Length = 182 Score = 38.9 bits (89), Expect = 0.84, Method: Compositional matrix adjust. Identities = 31/126 (24%), Positives = 58/126 (46%), Gaps = 10/126 (7%) Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 R+ + F+ RP E + +S + P +E LDL +G+G++ L + + Sbjct: 11 RIIKTRKGFDTRPTLESVKESLFSIIAPYVENS---VFLDLFSGSGSISLEAVSRGAK-R 66 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPPYIES 177 V ++ +AL+ N G ++R ++D +VE L FD+I +PPY ++ Sbjct: 67 AVMIEKDGEALKYIIENIDNLGFTDRCRAYKNDVVRAVEILGRKKEKFDIIFMDPPYQDN 126 Query: 178 VIVDCL 183 + L Sbjct: 127 ITTKVL 132 >gi|257463526|ref|ZP_05627919.1| ribosomal protein L11 methyltransferase [Fusobacterium sp. D12] Length = 309 Score = 38.9 bits (89), Expect = 0.84, Method: Compositional matrix adjust. Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 3/73 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV-SERFDTLQSDWFS 159 +LD+GTG+G + + K F GVDI A+E+A N N V E+++ L + Sbjct: 175 VLDVGTGSGILMIVAEKLGARFV-CGVDIDELAVEVAHENLELNAVPKEKYEVLHGNLIE 233 Query: 160 SVEGL-FDVIVSN 171 +E +DV+V+N Sbjct: 234 KIEAKSYDVVVAN 246 >gi|239905363|ref|YP_002952102.1| hypothetical protein DMR_07250 [Desulfovibrio magneticus RS-1] gi|239795227|dbj|BAH74216.1| hypothetical protein [Desulfovibrio magneticus RS-1] Length = 248 Score = 38.9 bits (89), Expect = 0.84, Method: Compositional matrix adjust. Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 1/58 (1%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 RILDLG+G+G + ++ +GVGVD+S E A+S AV GV++R + D Sbjct: 38 TRILDLGSGSGEMLCTWARDHGI-RGVGVDMSSLFTEQARSRAVELGVADRVRFVHGD 94 >gi|154344058|ref|XP_001567973.1| hypothetical protein [Leishmania braziliensis MHOM/BR/75/M2904] gi|134065307|emb|CAM40735.1| conserved hypothetical protein [Leishmania braziliensis MHOM/BR/75/M2904] Length = 253 Score = 38.9 bits (89), Expect = 0.84, Method: Compositional matrix adjust. Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 6/63 (9%) Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162 D+G+G G VCL +L E+ K VGV+I + A+ S+R L SD FS E Sbjct: 110 DIGSGVGNVCLQVLSETKCLKSVGVEIIPSRIRAAEE------ASKRAKLLYSDIFSKKE 163 Query: 163 GLF 165 ++ Sbjct: 164 AVW 166 >gi|77461575|ref|YP_351082.1| SAM-dependent methyltransferase [Pseudomonas fluorescens Pf0-1] gi|77385578|gb|ABA77091.1| SAM-dependent methyltransferase [Pseudomonas fluorescens Pf0-1] Length = 398 Score = 38.9 bits (89), Expect = 0.84, Method: Compositional matrix adjust. Identities = 40/141 (28%), Positives = 60/141 (42%), Gaps = 33/141 (23%) Query: 100 RILDLGT--GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 R+LDL + G V A S F VD S AL+ + NA NG +++ ++ D Sbjct: 223 RVLDLYSYIGGWGVQAAAFGASEVF---CVDASGFALDGVERNAALNGFADKMTCIEGDV 279 Query: 158 FSSVEGL------FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIAD 211 F +++ L FDVIV++PP D +G YR + + Sbjct: 280 FEALKELKASEERFDVIVADPPAFIKRKKDL-----------------KNGEGAYRRLNE 322 Query: 212 GVSRHLNKDGL-----CSVEI 227 R LNKDG+ CS+ + Sbjct: 323 QAMRLLNKDGILFSASCSMHL 343 >gi|83854854|ref|ZP_00948384.1| hypothetical protein NAS141_09001 [Sulfitobacter sp. NAS-14.1] gi|83842697|gb|EAP81864.1| hypothetical protein NAS141_09001 [Sulfitobacter sp. NAS-14.1] Length = 249 Score = 38.9 bits (89), Expect = 0.84, Method: Compositional matrix adjust. Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 10/81 (12%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+L+LG G GA L L P + GV+I +A+ N + F+ +++D + Sbjct: 48 RVLELGCGVGAASLCLGARVPGLQLTGVEIQPAYAALARRN------NPAFEVVEADIDA 101 Query: 160 SVEGL----FDVIVSNPPYIE 176 L FD +++NPPY + Sbjct: 102 MPLALRQRQFDHVLANPPYFD 122 >gi|71002480|ref|XP_755921.1| TAM domain methyltransferase [Aspergillus fumigatus Af293] gi|66853559|gb|EAL93883.1| TAM domain methyltransferase, putative [Aspergillus fumigatus Af293] gi|159129976|gb|EDP55090.1| TAM domain methyltransferase, putative [Aspergillus fumigatus A1163] Length = 274 Score = 38.9 bits (89), Expect = 0.84, Method: Compositional matrix adjust. Identities = 30/90 (33%), Positives = 40/90 (44%), Gaps = 6/90 (6%) Query: 79 ELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAK 138 +LLV L + P + RILD+GTGTG L + + P + VG D+S A Sbjct: 19 KLLVGGDL-YRAPILNDGRPKRILDVGTGTGIWALEMADDFPDAEIVGTDLSPIQPNWAP 77 Query: 139 SNAVTNGVSERFDTLQSDWFSSVEGLFDVI 168 N N D +SDW + FD I Sbjct: 78 PNCTFN-----VDDAESDWTFTPAEAFDYI 102 >gi|330684125|gb|EGG95874.1| type I restriction-modification system, M subunit [Staphylococcus epidermidis VCU121] Length = 518 Score = 38.5 bits (88), Expect = 0.85, Method: Compositional matrix adjust. Identities = 24/84 (28%), Positives = 45/84 (53%), Gaps = 5/84 (5%) Query: 96 RDVVR-ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS-ERFDTL 153 +D +R + D G+G++ L + KE+ ++ G + + +A+ N + + V E FD Sbjct: 221 KDQLRNVYDPTCGSGSLLLRVGKETKVYRYNGQERNNTTYNLARMNMLLHDVRYENFDIQ 280 Query: 154 QSDWFSS---VEGLFDVIVSNPPY 174 +D + +E FD +V+NPPY Sbjct: 281 NADTLENPAFMEEKFDAVVANPPY 304 >gi|300789901|ref|YP_003770192.1| hypothetical protein AMED_8087 [Amycolatopsis mediterranei U32] gi|299799415|gb|ADJ49790.1| conserved hypothetical protein [Amycolatopsis mediterranei U32] Length = 455 Score = 38.5 bits (88), Expect = 0.85, Method: Compositional matrix adjust. Identities = 20/38 (52%), Positives = 26/38 (68%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAK 138 +LDLG G+GA+ L KE F + VGVD+S AL IA+ Sbjct: 280 VLDLGCGSGALLRVLEKERSFTEIVGVDVSSSALAIAE 317 >gi|291484992|dbj|BAI86067.1| ribosomal protein L11 methyltransferase [Bacillus subtilis subsp. natto BEST195] Length = 311 Score = 38.5 bits (88), Expect = 0.85, Method: Compositional matrix adjust. Identities = 36/141 (25%), Positives = 65/141 (46%), Gaps = 30/141 (21%) Query: 56 GWRDFYN-------VRLTLSSDTFEPRPETELLV--DSALAF-------------SLPR- 92 W+ +Y+ + + + + P EL++ D +AF +L R Sbjct: 113 AWKKYYHPVKISEKFTIVPTWEEYTPVHTDELIIEMDPGMAFGTGTHPTTVLCIQALERF 172 Query: 93 IEKRDVVRILDLGTGTG--AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150 ++K D +++D+GTG+G ++ A+LK D+ A+E A+ N N VS+ Sbjct: 173 VQKGD--KVIDVGTGSGILSIAAAMLKAESVH---AYDLDPVAVESARLNLKLNKVSDIA 227 Query: 151 DTLQSDWFSSVEGLFDVIVSN 171 Q++ +EG DVIV+N Sbjct: 228 QVKQNNLLDGIEGEHDVIVAN 248 >gi|269103647|ref|ZP_06156344.1| ribosomal protein L11 methyltransferase [Photobacterium damselae subsp. damselae CIP 102761] gi|268163545|gb|EEZ42041.1| ribosomal protein L11 methyltransferase [Photobacterium damselae subsp. damselae CIP 102761] Length = 294 Score = 38.5 bits (88), Expect = 0.85, Method: Compositional matrix adjust. Identities = 37/131 (28%), Positives = 64/131 (48%), Gaps = 26/131 (19%) Query: 74 PRPET-ELLVDSALAFS----------LPRIEKRDVV--RILDLGTGTGAVCLALLKESP 120 P PE +L+D LAF L ++ +D+ ++D G G+G + +A LK Sbjct: 123 PEPEAVNVLLDPGLAFGTGTHPTTSLCLEWLDGQDLTGKTVIDFGCGSGILAIAALKLG- 181 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFSSVEGLFDVIVSN-------- 171 K +G+DI +A+ ++ NA NGV++ + L D ++ DV+V+N Sbjct: 182 AAKVIGIDIDPQAILASRDNAERNGVADNLELYLPQDQPEGIQA--DVVVANILAGPLRE 239 Query: 172 -PPYIESVIVD 181 P I+S++ D Sbjct: 240 LSPVIKSLVKD 250 >gi|228937337|ref|ZP_04099984.1| hypothetical protein bthur0008_230 [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228963133|ref|ZP_04124303.1| hypothetical protein bthur0004_250 [Bacillus thuringiensis serovar sotto str. T04001] gi|228970223|ref|ZP_04130883.1| hypothetical protein bthur0003_220 [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228976793|ref|ZP_04137206.1| hypothetical protein bthur0002_220 [Bacillus thuringiensis Bt407] gi|228782889|gb|EEM31054.1| hypothetical protein bthur0002_220 [Bacillus thuringiensis Bt407] gi|228789458|gb|EEM37377.1| hypothetical protein bthur0003_220 [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228796518|gb|EEM43956.1| hypothetical protein bthur0004_250 [Bacillus thuringiensis serovar sotto str. T04001] gi|228822295|gb|EEM68276.1| hypothetical protein bthur0008_230 [Bacillus thuringiensis serovar berliner ATCC 10792] gi|326937826|gb|AEA13722.1| methyltransferase [Bacillus thuringiensis serovar chinensis CT-43] Length = 246 Score = 38.5 bits (88), Expect = 0.85, Method: Compositional matrix adjust. Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 5/81 (6%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LDL TG V L LL K GV+I + ++ + NG+ ER + D Sbjct: 48 LLDLCTGNAVVPL-LLSTRTKGKITGVEIQERLYDMGVRSVQYNGLEERIHLIHGDLKDM 106 Query: 161 VEGL----FDVIVSNPPYIES 177 E L +DV+ NPPY ++ Sbjct: 107 PEKLGRHQYDVVTCNPPYFQT 127 >gi|227889783|ref|ZP_04007588.1| possible rRNA (guanine-N(2)-)-methyltransferase [Lactobacillus johnsonii ATCC 33200] gi|227849647|gb|EEJ59733.1| possible rRNA (guanine-N(2)-)-methyltransferase [Lactobacillus johnsonii ATCC 33200] Length = 182 Score = 38.5 bits (88), Expect = 0.85, Method: Compositional matrix adjust. Identities = 26/90 (28%), Positives = 46/90 (51%), Gaps = 7/90 (7%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LDL G+GA+ + + + + V VDIS +A ++ K N ERF L+ Sbjct: 44 QVLDLYAGSGALGIEAVSRG-YDEAVLVDISGQACQVIKKNVELTKEEERFRVLKCSDNR 102 Query: 160 SVEGL------FDVIVSNPPYIESVIVDCL 183 +++ L FD++ +PPY + IV + Sbjct: 103 AIKILQDEGKKFDLVFLDPPYAKQKIVKIM 132 >gi|183982054|ref|YP_001850345.1| methyltransferase [Mycobacterium marinum M] gi|183175380|gb|ACC40490.1| methyltransferase [Mycobacterium marinum M] Length = 249 Score = 38.5 bits (88), Expect = 0.85, Method: Compositional matrix adjust. Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 2/69 (2%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LD GTG G A+ S + G+D S A+E A+ NA GVS F + Sbjct: 53 VLDPGTGPG--HHAIYYASKGYSATGIDGSATAIERARDNAAKAGVSVNFQVADATRLEG 110 Query: 161 VEGLFDVIV 169 ++ FD +V Sbjct: 111 LDNRFDTVV 119 >gi|157148660|ref|YP_001455979.1| hypothetical protein CKO_04488 [Citrobacter koseri ATCC BAA-895] gi|229470499|sp|A8APY0|RLMG_CITK8 RecName: Full=Ribosomal RNA large subunit methyltransferase G; AltName: Full=23S rRNA m2G1835 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rlmG gi|157085865|gb|ABV15543.1| hypothetical protein CKO_04488 [Citrobacter koseri ATCC BAA-895] Length = 378 Score = 38.5 bits (88), Expect = 0.85, Method: Compositional matrix adjust. Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 3/77 (3%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS--ERFDTLQSDWF 158 I+DLG G G + L LL ++P V VD S A+ ++ N TN +R + + ++ Sbjct: 232 IVDLGCGNGVIGLTLLAKNPQASVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNAL 291 Query: 159 SSVEGL-FDVIVSNPPY 174 S VE F+ ++ NPP+ Sbjct: 292 SGVEPFRFNAVLCNPPF 308 >gi|332363977|gb|EGJ41756.1| ribosomal RNA small subunit methyltransferase D [Streptococcus sanguinis SK355] Length = 182 Score = 38.5 bits (88), Expect = 0.85, Method: Compositional matrix adjust. Identities = 35/131 (26%), Positives = 59/131 (45%), Gaps = 16/131 (12%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+LDL G+G++ + + V V+ +A I N ERFD L+ + Sbjct: 47 RVLDLYAGSGSLAIEAISRG-METAVLVEKDRRAQAIISENIQMTKEPERFDLLKMESGR 105 Query: 160 SVE---GLFDVIVSNPPYI-ESVIVDCLGLEVR-----------DFDPRISLDGGIDGLS 204 ++E G FD+++ +PPY E ++ D LE R + D + L I GL Sbjct: 106 ALEMLTGSFDLVLLDPPYAKEQIVEDIEKLEERRLLSQDVLVVCETDKDVELPEEIAGLG 165 Query: 205 HYRTIADGVSR 215 ++ G+S+ Sbjct: 166 IWKQKIYGISK 176 >gi|308063301|gb|ADO05188.1| type I restriction enzyme M protein [Helicobacter pylori Sat464] Length = 543 Score = 38.5 bits (88), Expect = 0.85, Method: Compositional matrix adjust. Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 21/96 (21%) Query: 94 EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD--------ISCKALEIAKSNAVTNG 145 E V+I D GTG + +AL + +G D IS K+L++ K N + N Sbjct: 226 EPTQSVKIYDPSAGTGTLLMALAHQ------IGTDSCTLYAQDISQKSLKMLKLNLILND 279 Query: 146 VSERF------DTLQSDWFSS-VEGLFDVIVSNPPY 174 ++ +TL + + S ++G D IVSNPP+ Sbjct: 280 LTHSLKYAIEGNTLTNPYHSKDLKGKMDYIVSNPPF 315 >gi|224418458|ref|ZP_03656464.1| SAM dependent methyltransferase [Helicobacter canadensis MIT 98-5491] gi|253827774|ref|ZP_04870659.1| putative O-methyltransferase [Helicobacter canadensis MIT 98-5491] gi|313141990|ref|ZP_07804183.1| methyltransferase small [Helicobacter canadensis MIT 98-5491] gi|253511180|gb|EES89839.1| putative O-methyltransferase [Helicobacter canadensis MIT 98-5491] gi|313131021|gb|EFR48638.1| methyltransferase small [Helicobacter canadensis MIT 98-5491] Length = 230 Score = 38.5 bits (88), Expect = 0.85, Method: Compositional matrix adjust. Identities = 31/112 (27%), Positives = 57/112 (50%), Gaps = 23/112 (20%) Query: 77 ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC----- 131 +T L D AL + P+ ++L++G+G+G + L KE V +D++ Sbjct: 15 DTLFLYDFALKYFKPK------KQVLEVGSGSGVLGLLCAKE------VEMDLTMIEKNP 62 Query: 132 KALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180 K LE+ + N NGV + D L+ ++ ++ FD I+SNPP+ + ++ Sbjct: 63 KMLELCQHNLRINGVEAKLMGGDFLEYNF---LDLKFDYILSNPPFYHNGVI 111 >gi|170017344|ref|YP_001728263.1| O-methyltransferase [Leuconostoc citreum KM20] gi|169804201|gb|ACA82819.1| Predicted O-methyltransferase [Leuconostoc citreum KM20] Length = 253 Score = 38.5 bits (88), Expect = 0.85, Method: Compositional matrix adjust. Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 9/79 (11%) Query: 102 LDLGTGTGAVCLALLKESPFFKG--VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 +DLG GTGAV L +P G V+I + ++AK + N +++R ++SD + Sbjct: 53 VDLGAGTGAVGLFY---APKVTGKLALVEIQPELADMAKRSIAMNELTQRVSVIESDMKA 109 Query: 160 SVE----GLFDVIVSNPPY 174 E G + ++SNPPY Sbjct: 110 IFEDIQPGSVETVLSNPPY 128 >gi|118616599|ref|YP_904931.1| methyltransferase [Mycobacterium ulcerans Agy99] gi|118568709|gb|ABL03460.1| methyltransferase [Mycobacterium ulcerans Agy99] Length = 226 Score = 38.5 bits (88), Expect = 0.85, Method: Compositional matrix adjust. Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 3/81 (3%) Query: 92 RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RF 150 + E D RIL++G GTG + + + P + +G D +AL+ A+ T V E RF Sbjct: 51 QAELADCGRILEIGCGTGNLAIKAKRAQPRAEVIGSDPDPRALQRAQRK--TGNVEEVRF 108 Query: 151 DTLQSDWFSSVEGLFDVIVSN 171 D + +G FD ++S+ Sbjct: 109 DQGYAQRLPYADGEFDRVLSS 129 >gi|115927295|ref|XP_789127.2| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] gi|115946774|ref|XP_001197252.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] Length = 237 Score = 38.5 bits (88), Expect = 0.86, Method: Compositional matrix adjust. Identities = 36/107 (33%), Positives = 53/107 (49%), Gaps = 7/107 (6%) Query: 89 SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEI-AKSNAVTNGV 146 +L R+ VRILD+G GTG V L + ++ + GVD+S L++ K + V Sbjct: 69 ALTRLVPNRDVRILDVGCGTGLVGQQLYDKG--YRDIHGVDMSAGLLKVLEKKQIYSKLV 126 Query: 147 SERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV-DCLGLEVRDFDP 192 RFD S +G FDVI+S+ +I S + CL +R P Sbjct: 127 KARFDP--STPLQYADGYFDVIISSGVFIPSHLTHTCLPEIIRLLKP 171 >gi|116618301|ref|YP_818672.1| O-methyltransferase [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|116097148|gb|ABJ62299.1| Predicted O-methyltransferase [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 254 Score = 38.5 bits (88), Expect = 0.86, Method: Compositional matrix adjust. Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 9/79 (11%) Query: 102 LDLGTGTGAVCLALLKESPFFKG--VGVDISCKALEIAKSNAVTNGVSERFDTLQSDW-- 157 +DLG+GTGAV L +P G V+I + E+A+ + N + ER +Q+D Sbjct: 53 VDLGSGTGAVGLFY---APKVTGEIKLVEIQPELAEMAQRSIELNNLHERVSVVQADMKD 109 Query: 158 -FSSVE-GLFDVIVSNPPY 174 F+ ++ G + I++NPPY Sbjct: 110 IFNEIKPGSVETILTNPPY 128 >gi|240103925|ref|YP_002960234.1| 23S rRNA (uracil-5-)-methyltransferase (rumA) [Thermococcus gammatolerans EJ3] gi|239911479|gb|ACS34370.1| 23S rRNA (uracil-5-)-methyltransferase (rumA) [Thermococcus gammatolerans EJ3] Length = 421 Score = 38.5 bits (88), Expect = 0.87, Method: Compositional matrix adjust. Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 4/77 (5%) Query: 97 DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 D R+LDL +G G + L K F GV+++ A+E+A N NGV+ +F +++ Sbjct: 281 DGERVLDLYSGVGTFGVYLAKRG--FTVEGVEVNPFAVEMANRNTEINGVNAQFRVGRAE 338 Query: 157 WFSSVEGLFDVIVSNPP 173 + G +D ++ +PP Sbjct: 339 --ETPIGDYDTVIVDPP 353 >gi|254459389|ref|ZP_05072810.1| methyltransferase small [Campylobacterales bacterium GD 1] gi|207084002|gb|EDZ61293.1| methyltransferase small [Campylobacterales bacterium GD 1] Length = 231 Score = 38.5 bits (88), Expect = 0.87, Method: Compositional matrix adjust. Identities = 23/76 (30%), Positives = 41/76 (53%), Gaps = 3/76 (3%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+LD+G G G V L + +++P K V+ +E A N+ N + + ++D+ Sbjct: 31 RVLDVGAGCGIVGLLVARDNPKVKLEAVEKQEAFVEYATINSRVNKID--YKIHKNDFVE 88 Query: 160 SVEGL-FDVIVSNPPY 174 E + +D I+SNPP+ Sbjct: 89 LDENIKYDYIISNPPF 104 >gi|319956879|ref|YP_004168142.1| methyltransferase type 11 [Nitratifractor salsuginis DSM 16511] gi|319419283|gb|ADV46393.1| Methyltransferase type 11 [Nitratifractor salsuginis DSM 16511] Length = 194 Score = 38.5 bits (88), Expect = 0.87, Method: Compositional matrix adjust. Identities = 29/85 (34%), Positives = 43/85 (50%), Gaps = 4/85 (4%) Query: 87 AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146 A SL R+ LDL GTG LAL + ++ VD+S AL+I A +G+ Sbjct: 26 AKSLERLPAHQPGLALDLACGTGRNTLALARRG--WQVDAVDLSPVALQILTEQAQQSGL 83 Query: 147 SERFDTLQSDW--FSSVEGLFDVIV 169 ++R T D FS+ E +D+I+ Sbjct: 84 ADRIRTSMEDLDTFSAPEEHYDLIL 108 >gi|260893156|ref|YP_003239253.1| RNA methyltransferase, TrmA family [Ammonifex degensii KC4] gi|260865297|gb|ACX52403.1| RNA methyltransferase, TrmA family [Ammonifex degensii KC4] Length = 436 Score = 38.5 bits (88), Expect = 0.87, Method: Compositional matrix adjust. Identities = 29/101 (28%), Positives = 53/101 (52%), Gaps = 10/101 (9%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE------RFDTL 153 R++D G G + L L +++ + +G++IS +A+ +A NA NG+S + + Sbjct: 293 RVIDAYCGVGTITLFLARKAA--QVIGIEISPEAVALASVNAAQNGLSHVSFVKGAAEEV 350 Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194 + + EG+FD++V +PP + V L VR PR+ Sbjct: 351 LPELLAR-EGMFDLVVLDPPR-QGVKQAALESLVRAQVPRV 389 >gi|194770513|ref|XP_001967337.1| GF20002 [Drosophila ananassae] gi|190618099|gb|EDV33623.1| GF20002 [Drosophila ananassae] Length = 222 Score = 38.5 bits (88), Expect = 0.87, Method: Compositional matrix adjust. Identities = 33/110 (30%), Positives = 56/110 (50%), Gaps = 13/110 (11%) Query: 72 FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG----- 126 +EP ++ LL+D AL L +EK +++G+G+G + AL K+ G G Sbjct: 18 YEPAEDSFLLLD-ALEKDLNFLEKLKPSLCVEIGSGSGVIITALAKKI----GTGSICLA 72 Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYI 175 DI+ KA + + AV NG R ++ + ++ DV++ NPPY+ Sbjct: 73 TDINLKACDATRKTAVRNGA--RVCPIRCNLTDALRSRTVDVLLFNPPYV 120 >gi|189499722|ref|YP_001959192.1| Methyltransferase type 11 [Chlorobium phaeobacteroides BS1] gi|189495163|gb|ACE03711.1| Methyltransferase type 11 [Chlorobium phaeobacteroides BS1] Length = 267 Score = 38.5 bits (88), Expect = 0.87, Method: Compositional matrix adjust. Identities = 26/73 (35%), Positives = 39/73 (53%), Gaps = 2/73 (2%) Query: 101 ILDLGTGTGAVC-LALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWF 158 +LDLG+G G C LA K P +GVD++ +E A++NA NGV F + + Sbjct: 76 VLDLGSGAGFDCFLAAAKVGPQGNVIGVDMTPAMIEKARANAKNNGVENVEFRLGEIENL 135 Query: 159 SSVEGLFDVIVSN 171 + DV++SN Sbjct: 136 PVADNSVDVVISN 148 >gi|297582440|ref|YP_003698220.1| methyltransferase small [Bacillus selenitireducens MLS10] gi|297140897|gb|ADH97654.1| methyltransferase small [Bacillus selenitireducens MLS10] Length = 201 Score = 38.5 bits (88), Expect = 0.87, Method: Compositional matrix adjust. Identities = 30/100 (30%), Positives = 53/100 (53%), Gaps = 14/100 (14%) Query: 78 TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137 + LL++S F+ P E +LD+G G G + +AL + + +D++ +++E+A Sbjct: 46 SRLLIES---FTEPETEGD----LLDIGCGWGPIGIALAMSTDQRRINMIDVNERSVELA 98 Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFD----VIVSNPP 173 + NA NGV++ Q D + EGL I++NPP Sbjct: 99 RLNAEANGVADNVHIEQRD---ATEGLPGDGCAAILTNPP 135 >gi|315498624|ref|YP_004087428.1| methyltransferase small [Asticcacaulis excentricus CB 48] gi|315416636|gb|ADU13277.1| methyltransferase small [Asticcacaulis excentricus CB 48] Length = 244 Score = 38.5 bits (88), Expect = 0.88, Method: Compositional matrix adjust. Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 2/83 (2%) Query: 96 RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER--FDTL 153 + V L+LG G G V L+L+ P VG++ + + N G R + Sbjct: 41 KRAVSALELGCGVGGVILSLVARCPLVHVVGIERDEATFAVTQINLAQAGGDHRAILGDI 100 Query: 154 QSDWFSSVEGLFDVIVSNPPYIE 176 + + S FD+++SNPPY + Sbjct: 101 GAGYRSFDLARFDLVLSNPPYFD 123 >gi|154276818|ref|XP_001539254.1| predicted protein [Ajellomyces capsulatus NAm1] gi|150414327|gb|EDN09692.1| predicted protein [Ajellomyces capsulatus NAm1] Length = 508 Score = 38.5 bits (88), Expect = 0.88, Method: Compositional matrix adjust. Identities = 57/232 (24%), Positives = 84/232 (36%), Gaps = 66/232 (28%) Query: 38 LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETE--------LLVDSALAFS 89 L + R + + ILG + F ++ + PRPETE LL+ Sbjct: 88 LREMVRRRARGVPLQYILGDQPFGDLEMLCRRGVLIPRPETESYTARVANLLLSELAPTR 147 Query: 90 LPRIEKRD--------VVRILDLGTGTGAVCLALLKES----PFFKGVGVDISCKALEIA 137 + RD +RI+DL TGTG + L L P + GVDIS +AL +A Sbjct: 148 RKGLAHRDECKCEHLPTLRIVDLCTGTGCIPLLLHSLLSPVFPKLQICGVDISTRALRLA 207 Query: 138 KSNAVTN----GVSERF---------DTLQSDWFSSVEGLF------------------- 165 + N N +SER D L S + GL+ Sbjct: 208 RENLKHNIALGTLSERARDEVSFVKGDVLSGQ--SELSGLYTSSVTPASKTAAAAAAAAA 265 Query: 166 ----------DVIVSNPPYIESV--IVDCLGLEVRDFDPRISLDGGIDGLSH 205 +++SNPPYI VR ++P+++L G H Sbjct: 266 AAEPEINPVITILLSNPPYISPAQFANGTTARSVRRYEPKLALVPPARGPIH 317 >gi|329667531|gb|AEB93479.1| putative methyltransferase [Lactobacillus johnsonii DPC 6026] Length = 182 Score = 38.5 bits (88), Expect = 0.89, Method: Compositional matrix adjust. Identities = 26/90 (28%), Positives = 46/90 (51%), Gaps = 7/90 (7%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LDL G+GA+ + + + + V VDIS +A ++ K N ERF L+ Sbjct: 44 QVLDLYAGSGALGIEAVSRG-YDEAVLVDISGQACQVIKKNVELTKEEERFRVLKCSDNR 102 Query: 160 SVEGL------FDVIVSNPPYIESVIVDCL 183 +++ L FD++ +PPY + IV + Sbjct: 103 AIKILQDEGKKFDLVFLDPPYAKQKIVKIM 132 >gi|294651383|ref|ZP_06728701.1| rRNA (guanine-N(2)-)-methyltransferase [Acinetobacter haemolyticus ATCC 19194] gi|292822738|gb|EFF81623.1| rRNA (guanine-N(2)-)-methyltransferase [Acinetobacter haemolyticus ATCC 19194] Length = 341 Score = 38.5 bits (88), Expect = 0.89, Method: Compositional matrix adjust. Identities = 27/101 (26%), Positives = 43/101 (42%), Gaps = 1/101 (0%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 +D+ A +P + + +I D G G G + L K P +D+ AL + Sbjct: 179 LDTGTAVLVPYLPQVKSGKIADFGCGAGIISAYLAKLHPNQHIFALDVDAFALRSTEMTF 238 Query: 142 VTNGVSERFDTLQS-DWFSSVEGLFDVIVSNPPYIESVIVD 181 NG++ LQ F+ D IVSNPP+ + + D Sbjct: 239 QRNGLNLAHLHLQPVTGFADAPKDLDAIVSNPPFHQGIHTD 279 >gi|219110143|ref|XP_002176823.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217411358|gb|EEC51286.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 403 Score = 38.5 bits (88), Expect = 0.89, Method: Compositional matrix adjust. Identities = 31/111 (27%), Positives = 50/111 (45%), Gaps = 10/111 (9%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV-SERFDTLQSD-- 156 R+L++ G GA + L K K + +++ + + + N + NG+ SE D + D Sbjct: 257 RLLEMYCGCGAHTIPLAKTGLLSKILAIELDERLVRACQQNILLNGIDSELIDMVSQDAG 316 Query: 157 -WFSSVEGLFDVIVSNPPYI---ESVIVDCLGLEVRDFDPRISLDGGIDGL 203 W E FD+I+ +PP ESV C DF + + G D L Sbjct: 317 KWSQRCESSFDIILVDPPRQGLDESV---CQMATRGDFQHMLYISCGRDAL 364 >gi|213583008|ref|ZP_03364834.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 262 Score = 38.5 bits (88), Expect = 0.89, Method: Compositional matrix adjust. Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 2/66 (3%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LD+G G G + AL SP + D+S A+E +++ NG+ + S+ FS Sbjct: 199 KVLDVGCGAGVLSAALASHSPKVRLTLCDVSAPAVEASRATLAANGLEG--EVFASNVFS 256 Query: 160 SVEGLF 165 V+G F Sbjct: 257 EVKGRF 262 >gi|167573072|ref|ZP_02365946.1| hypothetical protein BoklC_24763 [Burkholderia oklahomensis C6786] Length = 329 Score = 38.5 bits (88), Expect = 0.89, Method: Compositional matrix adjust. Identities = 28/84 (33%), Positives = 42/84 (50%), Gaps = 13/84 (15%) Query: 71 TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130 +F P+PE +L K +I+DLG+G+G + +L + +GVGVD+S Sbjct: 139 SFYPQPERAIL-------------KLRPKKIVDLGSGSGGFLIRMLHQLDGARGVGVDLS 185 Query: 131 CKALEIAKSNAVTNGVSERFDTLQ 154 A AK A NG +ER + L Sbjct: 186 ETATAQAKQAAEANGFAERLEFLH 209 >gi|153868815|ref|ZP_01998555.1| O-methyltransferase, family 2 [Beggiatoa sp. PS] gi|152074608|gb|EDN71446.1| O-methyltransferase, family 2 [Beggiatoa sp. PS] Length = 332 Score = 38.5 bits (88), Expect = 0.89, Method: Compositional matrix adjust. Identities = 22/57 (38%), Positives = 34/57 (59%), Gaps = 1/57 (1%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 ++LDLG GTG+ +AL + +P K V VD + LEIA+ N +S+R ++ D Sbjct: 161 KLLDLGGGTGSYSIALCQANPQLKAVIVD-QKEPLEIAQRLVDENQLSDRITLIEGD 216 >gi|91216322|ref|ZP_01253289.1| ubiquinone/menaquinone biosynthesis methyltransferase [Psychroflexus torquis ATCC 700755] gi|91185460|gb|EAS71836.1| ubiquinone/menaquinone biosynthesis methyltransferase [Psychroflexus torquis ATCC 700755] Length = 243 Score = 38.5 bits (88), Expect = 0.89, Method: Compositional matrix adjust. Identities = 33/121 (27%), Positives = 59/121 (48%), Gaps = 19/121 (15%) Query: 93 IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152 ++K + ILD+ TGTG + +A+ +S K VG+DIS L++ K +++R + Sbjct: 53 VKKTNPKYILDVATGTGDLAIAMA-DSDAEKIVGLDISAGMLQVGKDKIQKKKLNKRIEM 111 Query: 153 LQSDWFSSVEGLFDVIVSNPPYIESVI-VDCLGLEVRDFDPRISLDGGIDGLSHYRTIAD 211 +Q+D N PY + + VR+F+ +LD G+ + YR ++ Sbjct: 112 VQAD------------SENLPYPDHTFDAITVAFGVRNFE---NLDKGLSEI--YRVLSP 154 Query: 212 G 212 G Sbjct: 155 G 155 >gi|283779451|ref|YP_003370206.1| hypothetical protein Psta_1671 [Pirellula staleyi DSM 6068] gi|283437904|gb|ADB16346.1| protein of unknown function Met10 [Pirellula staleyi DSM 6068] Length = 428 Score = 38.5 bits (88), Expect = 0.90, Method: Compositional matrix adjust. Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 8/81 (9%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LDL TG + K + +GVD+ + L++AK NA N V RF +Q+D F+ Sbjct: 242 VLDLCCYTGGFAVQAKKLGGASEVIGVDLDEEPLKLAKENANLNQVRCRF--VQADAFAY 299 Query: 161 VEGL------FDVIVSNPPYI 175 + + FDV+V +PP + Sbjct: 300 MRDMQSSGRKFDVVVLDPPKL 320 >gi|255527290|ref|ZP_05394170.1| methyltransferase [Clostridium carboxidivorans P7] gi|296188353|ref|ZP_06856745.1| hypothetical protein CLCAR_3880 [Clostridium carboxidivorans P7] gi|255509028|gb|EET85388.1| methyltransferase [Clostridium carboxidivorans P7] gi|296047479|gb|EFG86921.1| hypothetical protein CLCAR_3880 [Clostridium carboxidivorans P7] Length = 246 Score = 38.5 bits (88), Expect = 0.90, Method: Compositional matrix adjust. Identities = 26/97 (26%), Positives = 48/97 (49%), Gaps = 6/97 (6%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 VD+ L + +++ ++DL TGTG V L ++ K VG++I + +E+A + Sbjct: 33 VDAVLLANFAVVKRN--AEVIDLCTGTGIVPFILAGKTEASKIVGIEIQEEMVEMADRSC 90 Query: 142 VTNGVSERFDTLQSDW----FSSVEGLFDVIVSNPPY 174 + N + ++ + +D F DV+ NPPY Sbjct: 91 MFNKLEDKIKFINTDLKDLKFLKNLSKVDVVTVNPPY 127 >gi|118618639|ref|YP_906971.1| methyltransferase [Mycobacterium ulcerans Agy99] gi|118570749|gb|ABL05500.1| methyltransferase [Mycobacterium ulcerans Agy99] Length = 249 Score = 38.5 bits (88), Expect = 0.90, Method: Compositional matrix adjust. Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 2/69 (2%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LD GTG G A+ S + G+D S A+E A+ NA GVS F + Sbjct: 53 VLDPGTGPG--HHAIYYASKGYSATGIDGSATAIERARDNAAKAGVSVNFQVADATRLEG 110 Query: 161 VEGLFDVIV 169 ++ FD +V Sbjct: 111 LDNRFDTVV 119 >gi|49475843|ref|YP_033884.1| ribosomal protein L11 methyltransferase [Bartonella henselae str. Houston-1] gi|49238651|emb|CAF27895.1| Ribosomal protein l11 methyltransferase [Bartonella henselae str. Houston-1] Length = 289 Score = 38.5 bits (88), Expect = 0.90, Method: Compositional matrix adjust. Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 9/85 (10%) Query: 93 IEKRDVVRILDLGTGTG--AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150 ++ + LDLGTG+G A+ +A+LK + DI A+++A+ N NGV + Sbjct: 146 LQNENPQNALDLGTGSGILAIGIAMLKP---ISVLASDIDPVAIQVAQHNIQLNGVKKYI 202 Query: 151 DTLQSDWFSSVE----GLFDVIVSN 171 T+ + F+ E FD+IV+N Sbjct: 203 TTVTATGFNHDEIASRAPFDLIVAN 227 >gi|86133209|ref|ZP_01051791.1| RNA methyltransferase, TrmA family [Polaribacter sp. MED152] gi|85820072|gb|EAQ41219.1| RNA methyltransferase, TrmA family [Polaribacter sp. MED152] Length = 483 Score = 38.5 bits (88), Expect = 0.90, Method: Compositional matrix adjust. Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 2/87 (2%) Query: 62 NVRLTLSSDTFEPRPET-ELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120 N +++ S F+ P++ E L + + L K D ++DL GTG + + +S Sbjct: 300 NFEISMKS-FFQTNPKSAEKLYSKVVDYVLEDKSKVDNTVVMDLFCGTGTIGQIVASKSE 358 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVS 147 K VGVDI A+E AK NA N + Sbjct: 359 NAKIVGVDIVASAIEDAKENAKRNNIE 385 >gi|270290327|ref|ZP_06196552.1| methyltransferase [Pediococcus acidilactici 7_4] gi|304384854|ref|ZP_07367200.1| methyltransferase [Pediococcus acidilactici DSM 20284] gi|270281108|gb|EFA26941.1| methyltransferase [Pediococcus acidilactici 7_4] gi|304329048|gb|EFL96268.1| methyltransferase [Pediococcus acidilactici DSM 20284] Length = 250 Score = 38.5 bits (88), Expect = 0.90, Method: Compositional matrix adjust. Identities = 33/122 (27%), Positives = 60/122 (49%), Gaps = 13/122 (10%) Query: 57 WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116 +RD N+++ S F +D+ L + +++ +I+DL G GAV L L Sbjct: 15 YRD--NIQIIQSPSVFS------FSLDAVLLANFAEVKQSSKAQIVDLCAGNGAVGLFLS 66 Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ---SDWFSSVEG-LFDVIVSNP 172 K++ + V+I + E+A+ + + N + ER+ L +D +++ D IV NP Sbjct: 67 KKTNGHVTM-VEIQSRLAEMAERSILLNDLGERYRVLNLPLADSLGTIKTDSVDSIVCNP 125 Query: 173 PY 174 PY Sbjct: 126 PY 127 >gi|237740339|ref|ZP_04570820.1| methyltransferase [Fusobacterium sp. 2_1_31] gi|229422356|gb|EEO37403.1| methyltransferase [Fusobacterium sp. 2_1_31] Length = 182 Score = 38.5 bits (88), Expect = 0.90, Method: Compositional matrix adjust. Identities = 31/126 (24%), Positives = 58/126 (46%), Gaps = 10/126 (7%) Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 R+ + F+ RP E + +S + P +E LDL +G+G++ L + + Sbjct: 11 RIIKTRKGFDTRPTLESVKESLFSIIAPYVENS---VFLDLFSGSGSISLEAVSRGAK-R 66 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPPYIES 177 V ++ +AL+ N G ++R ++D +VE L FD+I +PPY ++ Sbjct: 67 AVMIEKDGEALKYIIENIDNLGFTDRCRAYKNDVVRAVEILGRKKEKFDIIFMDPPYQDN 126 Query: 178 VIVDCL 183 + L Sbjct: 127 ITTKVL 132 >gi|301059346|ref|ZP_07200273.1| methyltransferase domain protein [delta proteobacterium NaphS2] gi|300446575|gb|EFK10413.1| methyltransferase domain protein [delta proteobacterium NaphS2] Length = 248 Score = 38.5 bits (88), Expect = 0.91, Method: Compositional matrix adjust. Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 2/71 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R +D+GTGTG + L + F +G+DIS K + A+ NA G+ F T ++ Sbjct: 48 RAIDVGTGTGQFAIYLGRLG--FHVIGIDISEKMVRKARDNAQEYGLRIDFQTQDAEDLL 105 Query: 160 SVEGLFDVIVS 170 + FDVIVS Sbjct: 106 FKDNTFDVIVS 116 >gi|288916265|ref|ZP_06410644.1| Methyltransferase type 11 [Frankia sp. EUN1f] gi|288352244|gb|EFC86442.1| Methyltransferase type 11 [Frankia sp. EUN1f] Length = 225 Score = 38.5 bits (88), Expect = 0.91, Method: Compositional matrix adjust. Identities = 26/70 (37%), Positives = 36/70 (51%), Gaps = 2/70 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+LD+G GTG ALL S VGVD S A+E AK+ A G+ RF + + Sbjct: 53 RVLDVGCGTGE--HALLAASLGLDVVGVDTSALAIERAKAKAAERGLRARFRVENALRLA 110 Query: 160 SVEGLFDVIV 169 + FD ++ Sbjct: 111 DLPERFDTVL 120 >gi|329575569|gb|EGG57106.1| putative type I restriction-modification system, M subunit [Enterococcus faecalis TX1467] Length = 357 Score = 38.5 bits (88), Expect = 0.92, Method: Compositional matrix adjust. Identities = 25/90 (27%), Positives = 40/90 (44%), Gaps = 9/90 (10%) Query: 94 EKRDVVRILDLGTGTGAVCLALLKESPFFKGV---GVDISCKALEIAKSNAVTNGVSER- 149 E + + + D G+G++ L + + K V G +++ AK N + +GV Sbjct: 43 EDKKLFSVFDPTMGSGSLMLNVRNYLNYPKSVKYHGQELNTTTFNHAKMNLILHGVEAED 102 Query: 150 -----FDTLQSDWFSSVEGLFDVIVSNPPY 174 DTL DW + FD +V NPPY Sbjct: 103 MNLRNGDTLNKDWPTDEPYTFDSVVMNPPY 132 >gi|325860566|ref|ZP_08173670.1| methyltransferase domain protein [Prevotella denticola CRIS 18C-A] gi|325481951|gb|EGC84980.1| methyltransferase domain protein [Prevotella denticola CRIS 18C-A] Length = 232 Score = 38.5 bits (88), Expect = 0.92, Method: Compositional matrix adjust. Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 3/77 (3%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS---DW 157 ILD+GTGTG + L + + P V++ A+ A N V + +R + + + D+ Sbjct: 36 ILDIGTGTGLIALMMAQRFPSAHIDAVEMDEGAVADAHLNIVRSPFRDRINIIHTSLQDY 95 Query: 158 FSSVEGLFDVIVSNPPY 174 ++ IV NPPY Sbjct: 96 HPQNGCRYEAIVCNPPY 112 >gi|284107018|ref|ZP_06386331.1| O-methyltransferase, family 2:Generic methyltransferase [Candidatus Poribacteria sp. WGA-A3] gi|283829996|gb|EFC34274.1| O-methyltransferase, family 2:Generic methyltransferase [Candidatus Poribacteria sp. WGA-A3] Length = 338 Score = 38.5 bits (88), Expect = 0.92, Method: Compositional matrix adjust. Identities = 29/82 (35%), Positives = 41/82 (50%), Gaps = 3/82 (3%) Query: 92 RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151 +++ +D +LD+G G G L LK +P + GV ALE+AK A +R Sbjct: 158 QLDLKDAKTLLDVGGGPGTYALEFLKNNPTLQ-AGVWDRAPALEVAKEIAKPLRHGKRLS 216 Query: 152 TLQSDWF-SSVEGLFDVI-VSN 171 D F + V G FDV+ VSN Sbjct: 217 CYAGDLFDNPVPGKFDVMWVSN 238 >gi|157364267|ref|YP_001471034.1| methyltransferase small [Thermotoga lettingae TMO] gi|157314871|gb|ABV33970.1| methyltransferase small [Thermotoga lettingae TMO] Length = 210 Score = 38.5 bits (88), Expect = 0.92, Method: Compositional matrix adjust. Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 14/98 (14%) Query: 78 TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137 T++LV+ A+ ++LDLG G G V + + E P + D++ +A+E A Sbjct: 56 TKILVEHAIVHGK---------KVLDLGCGYGVVGIVVKGEYPDSEVYMSDVNERAVEFA 106 Query: 138 KSNAVTNG--VSERFDTLQSDWFSSVEGLFDVIVSNPP 173 + NA N V+ + + W E FDVI+ NPP Sbjct: 107 RINAKDNNVDVTIKCGSFYDPW---QEEKFDVILLNPP 141 >gi|194335867|ref|YP_002017661.1| type I restriction-modification system, M subunit [Pelodictyon phaeoclathratiforme BU-1] gi|194308344|gb|ACF43044.1| type I restriction-modification system, M subunit [Pelodictyon phaeoclathratiforme BU-1] Length = 544 Score = 38.5 bits (88), Expect = 0.92, Method: Compositional matrix adjust. Identities = 29/111 (26%), Positives = 55/111 (49%), Gaps = 16/111 (14%) Query: 94 EKRDVVRILDLGTGTGAVCLALLKESPFF---KGVGVDISCKALEIAKSNAVTNGVSE-- 148 +K+ ++ +LD G+G++ L + K+ + K G + + +A+ N + +GV + Sbjct: 229 KKKYLISVLDFACGSGSLLLNVRKKMGQYGIGKIYGQESNITTYNLARMNMLLHGVKDSE 288 Query: 149 ----RFDTLQSDW------FSSVEGLFDVIVSNPPY-IESVIVDCLGLEVR 188 DTL +DW + + FD +V+NPP+ + D LG +VR Sbjct: 289 FEIFHGDTLLNDWEMLREANPAKKKHFDAVVANPPFSYRWELTDALGDDVR 339 >gi|300361484|ref|ZP_07057661.1| probable methyltransferase [Lactobacillus gasseri JV-V03] gi|300354103|gb|EFJ69974.1| probable methyltransferase [Lactobacillus gasseri JV-V03] Length = 182 Score = 38.5 bits (88), Expect = 0.93, Method: Compositional matrix adjust. Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 7/90 (7%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+LDL G+GA+ + + + V VDIS +A +I + N +RF L+ Sbjct: 44 RVLDLYAGSGALGIEAVSRG-YDSAVLVDISGQACQIIRKNVELTKEEDRFRVLKCSDNR 102 Query: 160 SVEGL------FDVIVSNPPYIESVIVDCL 183 +++ L FD+I +PPY + IV + Sbjct: 103 AIKILNEEGKKFDLIFLDPPYAKQKIVKIM 132 >gi|254494871|ref|ZP_01052104.2| putative RNA methylase family UPF0020 [Polaribacter sp. MED152] gi|213690453|gb|EAQ41532.2| putative RNA methylase family UPF0020 [Polaribacter sp. MED152] Length = 391 Score = 38.5 bits (88), Expect = 0.93, Method: Compositional matrix adjust. Identities = 24/73 (32%), Positives = 41/73 (56%), Gaps = 4/73 (5%) Query: 114 ALLKE--SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF--DVIV 169 ALLK+ S FK +G D + A++ AK+N ++ + E ++F+S + +F I+ Sbjct: 248 ALLKKIRSSHFKIMGFDKAPSAIQKAKANVISANLEEFIGVHHVNFFNSTKEVFGNTTIL 307 Query: 170 SNPPYIESVIVDC 182 NPPY E + +D Sbjct: 308 FNPPYGERLNIDT 320 >gi|260063140|ref|YP_003196220.1| RNA methyltransferase, TrmA family protein [Robiginitalea biformata HTCC2501] gi|88784709|gb|EAR15879.1| RNA methyltransferase, TrmA family protein [Robiginitalea biformata HTCC2501] Length = 509 Score = 38.5 bits (88), Expect = 0.93, Method: Compositional matrix adjust. Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 8/80 (10%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RF-----DTL 153 R+ DL TG G + + +++ + +G++ A+E A+ NA NG+S RF L Sbjct: 362 RVYDLYTGLGTIAQFVARQA--REVIGIEAVADAIEAARVNAAENGISNTRFFAGDMKEL 419 Query: 154 QSDWFSSVEGLFDVIVSNPP 173 + F G DV++++PP Sbjct: 420 FTSEFLETHGRPDVVITDPP 439 >gi|324995254|gb|EGC27166.1| ribosomal RNA small subunit methyltransferase D [Streptococcus sanguinis SK678] Length = 182 Score = 38.5 bits (88), Expect = 0.93, Method: Compositional matrix adjust. Identities = 34/131 (25%), Positives = 59/131 (45%), Gaps = 16/131 (12%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD--- 156 R+LDL G+G++ + + V V+ +A I N SERFD L+ + Sbjct: 47 RVLDLYAGSGSLAIEAISRG-METAVLVEKDRRAQAIISENIQMTKESERFDLLKMESGR 105 Query: 157 WFSSVEGLFDVIVSNPPYI-ESVIVDCLGLE-----------VRDFDPRISLDGGIDGLS 204 ++ G FD+++ +PPY E ++ D LE V + + + L I GL Sbjct: 106 ALDTLTGAFDLVLLDPPYAKEQIVADLEKLEEGQLLSQDVLVVCETEKEVELPEEIAGLG 165 Query: 205 HYRTIADGVSR 215 ++ G+S+ Sbjct: 166 IWKQKIYGISK 176 >gi|296418756|ref|XP_002838991.1| hypothetical protein [Tuber melanosporum Mel28] gi|295634985|emb|CAZ83182.1| unnamed protein product [Tuber melanosporum] Length = 372 Score = 38.5 bits (88), Expect = 0.93, Method: Compositional matrix adjust. Identities = 28/89 (31%), Positives = 40/89 (44%), Gaps = 6/89 (6%) Query: 80 LLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKS 139 LL+ F+ P EK RILD+GTGTG + + ++ P + + D+S + Sbjct: 120 LLMTGGSLFAAPLDEKNPPQRILDIGTGTGIWAVDIAEQFPSAEVIATDLSP-----IQP 174 Query: 140 NAVTNGVSERFDTLQSDWFSSVEGLFDVI 168 N V + D Q DW E FD I Sbjct: 175 NWVPPNLRFEIDDAQDDWTWGDE-TFDYI 202 >gi|262831253|sp|Q8EI95|TRMN6_SHEON RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName: Full=tRNA m6A37 methyltransferase Length = 236 Score = 38.5 bits (88), Expect = 0.93, Method: Compositional matrix adjust. Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 6/82 (7%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD--- 156 +ILD+G G+G + L + S + V++ KA N V + ++R + D Sbjct: 37 QILDIGAGSGLLSLMAAQRS-LGRITAVELEEKAAAACLYNMVQSPWADRLSVIHCDIQD 95 Query: 157 --WFSSVEGLFDVIVSNPPYIE 176 + G FD I+ NPPY E Sbjct: 96 FCQQTQYHGFFDHIICNPPYFE 117 >gi|227822632|ref|YP_002826604.1| ribosomal protein L11 methyltransferase [Sinorhizobium fredii NGR234] gi|254783311|sp|C3MEL0|PRMA_RHISN RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11 Mtase gi|227341633|gb|ACP25851.1| ribosomal protein L11 methyltransferase [Sinorhizobium fredii NGR234] Length = 291 Score = 38.5 bits (88), Expect = 0.93, Method: Compositional matrix adjust. Identities = 27/80 (33%), Positives = 39/80 (48%), Gaps = 5/80 (6%) Query: 96 RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155 R V +LDLGTG+G + +A K G+ DI A +A NA NGV + + Sbjct: 150 RRVRNVLDLGTGSGVLAIAAWK-LLHVPGLATDIDPVATRVASDNARRNGVVDGLTFATA 208 Query: 156 DWFSS----VEGLFDVIVSN 171 F S G FD++++N Sbjct: 209 PGFHSTAFGTHGPFDLVIAN 228 >gi|160933690|ref|ZP_02081078.1| hypothetical protein CLOLEP_02551 [Clostridium leptum DSM 753] gi|156867567|gb|EDO60939.1| hypothetical protein CLOLEP_02551 [Clostridium leptum DSM 753] Length = 460 Score = 38.5 bits (88), Expect = 0.93, Method: Compositional matrix adjust. Identities = 31/94 (32%), Positives = 51/94 (54%), Gaps = 11/94 (11%) Query: 86 LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145 LA ++K D V LDL GTG + + + ++ K +GV++ +A+E AK+NAV NG Sbjct: 298 LAGEYASLQKEDTV--LDLYCGTGTIGMTMASKA--GKVIGVEVVPEAIEDAKANAVRNG 353 Query: 146 VSERFDTLQSDWFSSVEGLFD------VIVSNPP 173 V + + + D +V+ L V+V +PP Sbjct: 354 V-KNIEFICGDSAQAVQMLRKRGERPTVVVVDPP 386 >gi|16125773|ref|NP_420337.1| 50S ribosomal protein L11 methyltransferase [Caulobacter crescentus CB15] gi|221234531|ref|YP_002516967.1| ribosomal protein L11 methyltransferase [Caulobacter crescentus NA1000] gi|38605457|sp|Q9A838|PRMA_CAUCR RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11 Mtase gi|13422907|gb|AAK23505.1| ribosomal protein L11 methyltransferase, putative [Caulobacter crescentus CB15] gi|220963703|gb|ACL95059.1| ribosomal protein L11 methyltransferase [Caulobacter crescentus NA1000] Length = 288 Score = 38.5 bits (88), Expect = 0.93, Method: Compositional matrix adjust. Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 10/83 (12%) Query: 93 IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152 I+ R ++LD+G GTG + +A + VG DI ++ I+K NA+ N + R Sbjct: 145 IKARRFNKVLDVGAGTGLLAIAAARTGAKL-AVGTDIDKPSVRISKENALVNKANAR--- 200 Query: 153 LQSDWFSSVEGLFDVIVS-NPPY 174 F GL + +V+ N PY Sbjct: 201 -----FVHASGLSNRLVAENAPY 218 >gi|30262853|ref|NP_845230.1| UbiE/COQ5 family methlytransferase [Bacillus anthracis str. Ames] gi|47528184|ref|YP_019533.1| UbiE/COQ5 family methlytransferase [Bacillus anthracis str. 'Ames Ancestor'] gi|49185701|ref|YP_028953.1| UbiE/COQ5 family methlytransferase [Bacillus anthracis str. Sterne] gi|65320176|ref|ZP_00393135.1| COG0500: SAM-dependent methyltransferases [Bacillus anthracis str. A2012] gi|227814301|ref|YP_002814310.1| methyltransferase, UbiE/COQ5 family [Bacillus anthracis str. CDC 684] gi|254685448|ref|ZP_05149308.1| methyltransferase, UbiE/COQ5 family protein [Bacillus anthracis str. CNEVA-9066] gi|254722857|ref|ZP_05184645.1| methyltransferase, UbiE/COQ5 family protein [Bacillus anthracis str. A1055] gi|254737906|ref|ZP_05195609.1| methyltransferase, UbiE/COQ5 family protein [Bacillus anthracis str. Western North America USA6153] gi|254742921|ref|ZP_05200606.1| methyltransferase, UbiE/COQ5 family protein [Bacillus anthracis str. Kruger B] gi|254752220|ref|ZP_05204257.1| methyltransferase, UbiE/COQ5 family protein [Bacillus anthracis str. Vollum] gi|254760737|ref|ZP_05212761.1| methyltransferase, UbiE/COQ5 family protein [Bacillus anthracis str. Australia 94] gi|30257486|gb|AAP26716.1| methyltransferase, UbiE/COQ5 family [Bacillus anthracis str. Ames] gi|47503332|gb|AAT32008.1| methyltransferase, UbiE/COQ5 family [Bacillus anthracis str. 'Ames Ancestor'] gi|49179628|gb|AAT55004.1| methlytransferase, UbiE/COQ5 family [Bacillus anthracis str. Sterne] gi|227005462|gb|ACP15205.1| methyltransferase, UbiE/COQ5 family [Bacillus anthracis str. CDC 684] Length = 258 Score = 38.5 bits (88), Expect = 0.93, Method: Compositional matrix adjust. Identities = 23/61 (37%), Positives = 35/61 (57%), Gaps = 4/61 (6%) Query: 86 LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG-VGVDISCKALEIAKSNAVTN 144 L + + ++E R R+LD+ TG G V L +P FK V +D++ K LE AK ++N Sbjct: 30 LQYVVQQVESRHNNRLLDIATGGGHVANVL---APLFKEVVALDLTEKMLENAKKFIISN 86 Query: 145 G 145 G Sbjct: 87 G 87 >gi|327313660|ref|YP_004329097.1| methyltransferase domain-containing protein [Prevotella denticola F0289] gi|326945039|gb|AEA20924.1| methyltransferase domain protein [Prevotella denticola F0289] Length = 232 Score = 38.5 bits (88), Expect = 0.94, Method: Compositional matrix adjust. Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 3/77 (3%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS---DW 157 ILD+GTGTG + L + + P V++ A+ A N V + +R + + + D+ Sbjct: 36 ILDIGTGTGLIALMMAQRFPSAHIDAVEMDEGAVADAHLNIVRSPFRDRINIIHTSLQDY 95 Query: 158 FSSVEGLFDVIVSNPPY 174 ++ IV NPPY Sbjct: 96 HPQNGCRYEAIVCNPPY 112 >gi|319938985|ref|ZP_08013349.1| hypothetical protein HMPREF9459_00337 [Streptococcus anginosus 1_2_62CV] gi|319812035|gb|EFW08301.1| hypothetical protein HMPREF9459_00337 [Streptococcus anginosus 1_2_62CV] Length = 107 Score = 38.5 bits (88), Expect = 0.94, Method: Compositional matrix adjust. Identities = 19/51 (37%), Positives = 32/51 (62%) Query: 88 FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAK 138 +++ ++E+++V ILD+G G G L L + P K +G+DIS A+ AK Sbjct: 48 WAISQLEQQNVKNILDVGIGNGQSTLYLKQYFPNSKVIGIDISKTAITQAK 98 >gi|306820892|ref|ZP_07454512.1| possible SAM-dependent methyltransferase [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304551006|gb|EFM38977.1| possible SAM-dependent methyltransferase [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 249 Score = 38.5 bits (88), Expect = 0.94, Method: Compositional matrix adjust. Identities = 22/49 (44%), Positives = 30/49 (61%), Gaps = 2/49 (4%) Query: 94 EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142 +K D+ IL+LG GTG + LL+ ++ VGVDIS + L IAK V Sbjct: 36 DKEDIKNILELGCGTGNITQRLLEYG--YEVVGVDISGEMLSIAKEKLV 82 >gi|311113255|ref|YP_003984477.1| methyltransferase domain-containing protein [Rothia dentocariosa ATCC 17931] gi|310944749|gb|ADP41043.1| methyltransferase domain protein [Rothia dentocariosa ATCC 17931] Length = 248 Score = 38.5 bits (88), Expect = 0.94, Method: Compositional matrix adjust. Identities = 28/112 (25%), Positives = 53/112 (47%), Gaps = 7/112 (6%) Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 V +T ++ F P +D A L ++ + +LD+G G G + L+L +P Sbjct: 67 QVSVTTANGIFSPSG-----IDKGTAVLLAQVPEPHGKYMLDIGCGWGPITLSLAMLAPQ 121 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173 + G+D++ ++L + + NA G+ + + ++ FD I SNPP Sbjct: 122 SEVYGIDVNSRSLSLTEQNARALGLHNVSVSTPDEIDPTLR--FDTIWSNPP 171 >gi|294782567|ref|ZP_06747893.1| RNA methyltransferase, RsmD family [Fusobacterium sp. 1_1_41FAA] gi|294481208|gb|EFG28983.1| RNA methyltransferase, RsmD family [Fusobacterium sp. 1_1_41FAA] Length = 182 Score = 38.5 bits (88), Expect = 0.94, Method: Compositional matrix adjust. Identities = 31/126 (24%), Positives = 58/126 (46%), Gaps = 10/126 (7%) Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 R+ + F+ RP E + +S + P +E LDL +G+G++ L + + Sbjct: 11 RIIKTRKGFDTRPTLESVKESLFSIIAPYVENS---VFLDLFSGSGSISLEAVSRGAK-R 66 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPPYIES 177 V ++ +AL+ N G ++R ++D +VE L FD+I +PPY ++ Sbjct: 67 AVMIEKDGEALKYIIENIDNLGFTDRCRAYKNDVVRAVEILGRKKEKFDIIFMDPPYQDN 126 Query: 178 VIVDCL 183 + L Sbjct: 127 ITTKVL 132 >gi|311232731|gb|ADP85585.1| methyltransferase small [Desulfovibrio vulgaris RCH1] Length = 478 Score = 38.5 bits (88), Expect = 0.94, Method: Compositional matrix adjust. Identities = 23/54 (42%), Positives = 30/54 (55%) Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 DLGTG G V LALL S GVG++ + A++NA G+S RF +D Sbjct: 206 DLGTGCGVVGLALLLGSSRLSGVGIEQDAALVNAARANAHRLGLSTRFTVHHAD 259 >gi|226951700|ref|ZP_03822164.1| ribosomal RNA small subunit methyltransferase C [Acinetobacter sp. ATCC 27244] gi|226837565|gb|EEH69948.1| ribosomal RNA small subunit methyltransferase C [Acinetobacter sp. ATCC 27244] Length = 341 Score = 38.5 bits (88), Expect = 0.94, Method: Compositional matrix adjust. Identities = 27/101 (26%), Positives = 43/101 (42%), Gaps = 1/101 (0%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 +D+ A +P + + +I D G G G + L K P +D+ AL + Sbjct: 179 LDTGTAVLVPYLPQVKSGKIADFGCGAGIISAYLAKLHPNQHIFALDVDAFALRSTEMTF 238 Query: 142 VTNGVSERFDTLQS-DWFSSVEGLFDVIVSNPPYIESVIVD 181 NG++ LQ F+ D IVSNPP+ + + D Sbjct: 239 QRNGLNLAHLHLQPVTGFADAPKDLDAIVSNPPFHQGIHTD 279 >gi|226713008|sp|A3M8J9|RSMC_ACIBT RecName: Full=Ribosomal RNA small subunit methyltransferase C; AltName: Full=16S rRNA m2G1207 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rsmC gi|193078279|gb|ABO13243.2| ribosomal RNA small subunit methyltransferase C [Acinetobacter baumannii ATCC 17978] Length = 337 Score = 38.5 bits (88), Expect = 0.94, Method: Compositional matrix adjust. Identities = 34/135 (25%), Positives = 54/135 (40%), Gaps = 3/135 (2%) Query: 47 KHESIHRILGWRDFYNVRLTLSSDTFEPRPE--TELLVDSALAFSLPRIEKRDVVRILDL 104 K E I + W Y V++ T P ++ +D A LP + + RI D Sbjct: 142 KTEKIKPLESWLKTYTVQVNEQELTICALPGVFSQTHLDVGTAVLLPYLNQVKSGRIADF 201 Query: 105 GTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV-SERFDTLQSDWFSSVEG 163 G G G + L K + +DI AL+ + NG+ S++ + Sbjct: 202 GCGAGIISCYLAKANSSNIIHALDIDAFALQSTEMTFSRNGIGSDQLRLQPVTGIADAPT 261 Query: 164 LFDVIVSNPPYIESV 178 D IVSNPP+ + + Sbjct: 262 ELDAIVSNPPFHQGI 276 >gi|154322403|ref|XP_001560516.1| hypothetical protein BC1G_00544 [Botryotinia fuckeliana B05.10] gi|150847878|gb|EDN23071.1| hypothetical protein BC1G_00544 [Botryotinia fuckeliana B05.10] Length = 230 Score = 38.5 bits (88), Expect = 0.94, Method: Compositional matrix adjust. Identities = 32/87 (36%), Positives = 46/87 (52%), Gaps = 18/87 (20%) Query: 125 VGVDISCKALEIAKSNAVTNGV------SERF---DTL--QSDWFSSVEGLFDVIVSNPP 173 VG+DIS KAL+++ N N + S RF D L + +G+ DVIVSNPP Sbjct: 31 VGLDISKKALDLSIQNVRFNDLKRSAQQSVRFEFSDVLGDEEKILDKFQGVCDVIVSNPP 90 Query: 174 YIESVIVDCLGLE----VRDFDPRISL 196 YI D E VR+++P+++L Sbjct: 91 YISE---DGFNKETTRSVRNWEPKLAL 114 >gi|319954120|ref|YP_004165387.1| 23S rRNA m(5)u-1939 methyltransferase [Cellulophaga algicola DSM 14237] gi|319422780|gb|ADV49889.1| 23S rRNA m(5)U-1939 methyltransferase [Cellulophaga algicola DSM 14237] Length = 472 Score = 38.5 bits (88), Expect = 0.95, Method: Compositional matrix adjust. Identities = 23/79 (29%), Positives = 42/79 (53%), Gaps = 8/79 (10%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER------FDTLQ 154 + DL TGTG + + K++ K VG++ +A+E AK+NA+ N + + Sbjct: 328 VYDLYTGTGTIAQFVAKKAK--KVVGIEAVPEAIEDAKANAIFNKIENTSFFAGDMKNIF 385 Query: 155 SDWFSSVEGLFDVIVSNPP 173 ++ F G D+I+++PP Sbjct: 386 NEEFIRENGTPDIIITDPP 404 >gi|303248941|ref|ZP_07335188.1| Methyltransferase type 11 [Desulfovibrio fructosovorans JJ] gi|302489664|gb|EFL49600.1| Methyltransferase type 11 [Desulfovibrio fructosovorans JJ] Length = 255 Score = 38.5 bits (88), Expect = 0.95, Method: Compositional matrix adjust. Identities = 43/169 (25%), Positives = 69/169 (40%), Gaps = 31/169 (18%) Query: 92 RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151 RIEK DV R+LD+G G G L + P + G+D S + + A+ A + E D Sbjct: 25 RIEKEDVKRVLDVGCGPGNSSEVLARRFPRARVRGIDSSPEMIGSAR-QAHSEIDFELCD 83 Query: 152 TLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIAD 211 + S+EG +DV+ SN I + ++ + Sbjct: 84 AGKE--LESLEGGYDVVFSN--------------------------ACIQWVPDHKALLK 115 Query: 212 GVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 + L G+ +V+I NQ + +I +L +A+KD N RV Sbjct: 116 NMMGLLAPGGVLAVQIPMNQHEPIHKIIG--ELVTSDAWKDAFPNPRVF 162 >gi|300813552|ref|ZP_07093883.1| ribosomal protein L11 methyltransferase [Peptoniphilus sp. oral taxon 836 str. F0141] gi|300512300|gb|EFK39469.1| ribosomal protein L11 methyltransferase [Peptoniphilus sp. oral taxon 836 str. F0141] Length = 301 Score = 38.5 bits (88), Expect = 0.95, Method: Compositional matrix adjust. Identities = 30/93 (32%), Positives = 50/93 (53%), Gaps = 4/93 (4%) Query: 89 SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148 +L + K+D+ I D+G G+G + +A +K + VDI K ++ +K NA N V + Sbjct: 157 ALDKYVKKDM-SIFDIGCGSGILGIAAIKLGGKSATL-VDIDDKCIKASKENAKLNEVYD 214 Query: 149 RFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181 + + + +EG D+IVSN I +IVD Sbjct: 215 KVKVKKGNLLDVIEGKCDIIVSN--IIAEIIVD 245 >gi|296139974|ref|YP_003647217.1| methyltransferase type 11 [Tsukamurella paurometabola DSM 20162] gi|296028108|gb|ADG78878.1| Methyltransferase type 11 [Tsukamurella paurometabola DSM 20162] Length = 323 Score = 38.5 bits (88), Expect = 0.95, Method: Compositional matrix adjust. Identities = 36/139 (25%), Positives = 59/139 (42%), Gaps = 24/139 (17%) Query: 29 VLDDRQRFFLTNAIVR----SLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDS 84 +L QR T +VR + H H LG D+ + L S+ D+ Sbjct: 16 LLKQHQRLPETRGLVRVDDMTHDHSHAHTELGIHDWAAMAAELESE-----------ADT 64 Query: 85 ALAFSLPRIEKRDV-------VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137 L + + ++ D RILD+G G G L + P + + VD S + LE+A Sbjct: 65 YLPYVIGALDDFDARRCGPAPSRILDVGAGPGVFTAELARRYPDAEVIAVDGSPELLELA 124 Query: 138 KSNAVTNGVSERFDTLQSD 156 + A G++ +TL++D Sbjct: 125 RDRAARAGLT--IETLRTD 141 >gi|237753106|ref|ZP_04583586.1| conserved hypothetical protein [Helicobacter winghamensis ATCC BAA-430] gi|229375373|gb|EEO25464.1| conserved hypothetical protein [Helicobacter winghamensis ATCC BAA-430] Length = 266 Score = 38.5 bits (88), Expect = 0.95, Method: Compositional matrix adjust. Identities = 24/53 (45%), Positives = 29/53 (54%), Gaps = 4/53 (7%) Query: 90 LPRIEKRDVV--RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140 L R+ K V+ RILD G GTG C K +K VGVD+S +E AK N Sbjct: 33 LLRLFKECVIGDRILDFGCGTGIFCEYFAKNG--YKVVGVDVSFDMIEYAKKN 83 >gi|311741682|ref|ZP_07715504.1| conserved hypothetical protein [Corynebacterium pseudogenitalium ATCC 33035] gi|311303203|gb|EFQ79284.1| conserved hypothetical protein [Corynebacterium pseudogenitalium ATCC 33035] Length = 227 Score = 38.5 bits (88), Expect = 0.95, Method: Compositional matrix adjust. Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 2/67 (2%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKG--VGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 R+LDLG GTG + L ES + + VG D+S A+ IA+ A +G+ + + +D Sbjct: 55 ARVLDLGCGTGWLARTLAAESRYRRANIVGYDLSPNAIRIARERAAADGLGAQTEFHVAD 114 Query: 157 WFSSVEG 163 + + G Sbjct: 115 ILTPLAG 121 >gi|184159405|ref|YP_001847744.1| 16S RNA G1207 methylase RsmC [Acinetobacter baumannii ACICU] gi|332876245|ref|ZP_08444020.1| methyltransferase small domain protein [Acinetobacter baumannii 6014059] gi|226712933|sp|B2HYF8|RSMC_ACIBC RecName: Full=Ribosomal RNA small subunit methyltransferase C; AltName: Full=16S rRNA m2G1207 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rsmC gi|183210999|gb|ACC58397.1| 16S RNA G1207 methylase RsmC [Acinetobacter baumannii ACICU] gi|322509317|gb|ADX04771.1| rsmC [Acinetobacter baumannii 1656-2] gi|323519344|gb|ADX93725.1| 16S RNA G1207 methylase RsmC [Acinetobacter baumannii TCDC-AB0715] gi|332735517|gb|EGJ66569.1| methyltransferase small domain protein [Acinetobacter baumannii 6014059] Length = 337 Score = 38.5 bits (88), Expect = 0.95, Method: Compositional matrix adjust. Identities = 34/135 (25%), Positives = 54/135 (40%), Gaps = 3/135 (2%) Query: 47 KHESIHRILGWRDFYNVRLTLSSDTFEPRPE--TELLVDSALAFSLPRIEKRDVVRILDL 104 K E I + W Y V++ T P ++ +D A LP + + RI D Sbjct: 142 KTEKIKPLESWLKTYTVQVNEQELTICALPGVFSQTHLDVGTAVLLPYLNQVKSGRIADF 201 Query: 105 GTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV-SERFDTLQSDWFSSVEG 163 G G G + L K + +DI AL+ + NG+ S++ + Sbjct: 202 GCGAGIISCYLAKANSSNIIHALDIDAFALQSTEMTFSRNGIGSDQLRLQPVTGIADAPT 261 Query: 164 LFDVIVSNPPYIESV 178 D IVSNPP+ + + Sbjct: 262 ELDAIVSNPPFHQGI 276 >gi|163794459|ref|ZP_02188430.1| Ribosomal protein L11 methylase [alpha proteobacterium BAL199] gi|159180183|gb|EDP64706.1| Ribosomal protein L11 methylase [alpha proteobacterium BAL199] Length = 292 Score = 38.5 bits (88), Expect = 0.95, Method: Compositional matrix adjust. Identities = 38/124 (30%), Positives = 60/124 (48%), Gaps = 20/124 (16%) Query: 68 SSDTFEPRP--ETELLVDSALAF--------SLPRIEKRDVVR------ILDLGTGTGAV 111 SS E +P EL+VD+A AF +L +D+VR +LDLG G+G + Sbjct: 105 SSHVTETKPAGSIELIVDAARAFGSGSHATTALCLRALQDLVRRRRPRRVLDLGCGSGIL 164 Query: 112 CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS-DWFSSV---EGLFDV 167 +A K P + V VD+ ++ A NA NG + R T S W + + +D+ Sbjct: 165 AMATAKLVPSSRIVAVDLDPPSVTTAAENARLNGTATRIRTAVSRGWRAPLVRRTAPYDL 224 Query: 168 IVSN 171 +++N Sbjct: 225 VLAN 228 >gi|319947370|ref|ZP_08021603.1| methyltransferase [Streptococcus australis ATCC 700641] gi|319746612|gb|EFV98872.1| methyltransferase [Streptococcus australis ATCC 700641] Length = 248 Score = 38.5 bits (88), Expect = 0.96, Method: Compositional matrix adjust. Identities = 29/99 (29%), Positives = 48/99 (48%), Gaps = 7/99 (7%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 +DS L P++ R + I+DL G GAV L + VGV+I + ++A+ + Sbjct: 33 IDSVLLSRFPKLPNRGL--IVDLCAGNGAVGLFASTRTKA-TIVGVEIQERLADMAERSI 89 Query: 142 VTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPYIE 176 NG+S+R + D + D+I+ NPPY + Sbjct: 90 QLNGLSDRMSMITDDLKNLPHHFPGSKIDLILCNPPYFK 128 >gi|315659794|ref|ZP_07912653.1| S-adenosyl-L-methionine-dependent methyltransferase [Staphylococcus lugdunensis M23590] gi|315495082|gb|EFU83418.1| S-adenosyl-L-methionine-dependent methyltransferase [Staphylococcus lugdunensis M23590] Length = 227 Score = 38.5 bits (88), Expect = 0.96, Method: Compositional matrix adjust. Identities = 19/48 (39%), Positives = 30/48 (62%), Gaps = 2/48 (4%) Query: 93 IEKRDVV--RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAK 138 I K D++ ILD G GA L ++ PF +GVG+D++ K+L+ A+ Sbjct: 34 IAKEDIIGKTILDFGCNQGAFLRQLYQKVPFKQGVGIDLARKSLQKAE 81 >gi|315918150|ref|ZP_07914390.1| ribosomal protein L11 methyltransferase [Fusobacterium gonidiaformans ATCC 25563] gi|313692025|gb|EFS28860.1| ribosomal protein L11 methyltransferase [Fusobacterium gonidiaformans ATCC 25563] Length = 313 Score = 38.5 bits (88), Expect = 0.96, Method: Compositional matrix adjust. Identities = 32/102 (31%), Positives = 51/102 (50%), Gaps = 9/102 (8%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSDWFS 159 +LD+GTG+G + + K F GVDI A+E+A N N VS E++ L + Sbjct: 179 VLDVGTGSGILMIVAEKLGAGFV-CGVDIDELAVEVANENLELNKVSKEKYKVLHGNLIE 237 Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200 +E +DV+V+N ++ D L L ++D + G I Sbjct: 238 KIEKQSYDVVVAN------ILADVLLLLLKDISSVVKTGGKI 273 >gi|308061791|gb|ADO03679.1| type I restriction enzyme M protein [Helicobacter pylori Cuz20] Length = 543 Score = 38.5 bits (88), Expect = 0.96, Method: Compositional matrix adjust. Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 9/90 (10%) Query: 94 EKRDVVRILDLGTGTGAVCLALLKE--SPFFKGVGVDISCKALEIAKSNAVTNGVSERF- 150 E V+I D GTG + +AL + + DIS K+L++ K N + N ++ Sbjct: 226 EPTKSVKIYDPSAGTGTLLMALAHQIGTDSCTLYAQDISQKSLKMLKLNLILNDLTHSLK 285 Query: 151 -----DTLQSDWFSS-VEGLFDVIVSNPPY 174 +TL + + S ++G D IVSNPP+ Sbjct: 286 YAIEGNTLTNPYHSKDLKGKMDYIVSNPPF 315 >gi|125717481|ref|YP_001034614.1| hypothetical protein SSA_0624 [Streptococcus sanguinis SK36] gi|125497398|gb|ABN44064.1| Conserved hypothetical protein [Streptococcus sanguinis SK36] Length = 179 Score = 38.5 bits (88), Expect = 0.96, Method: Compositional matrix adjust. Identities = 34/131 (25%), Positives = 57/131 (43%), Gaps = 16/131 (12%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+LD G+G + + + + V V+ +A I N ERFD L+ + Sbjct: 44 RVLDFYAGSGGLAIEAISRG-MEEAVLVEKDRRAQAIISENIQMTKEPERFDLLKMESCR 102 Query: 160 SVE---GLFDVIVSNPPYI-ESVIVDCLGLEVRDF-----------DPRISLDGGIDGLS 204 ++E G FD+++ +PPY E ++ D LE R D + L I GL Sbjct: 103 ALEMLTGSFDLVLLDPPYAKEQIVEDLEKLEERQLLGQDVLVVCETDKEVELPEEIAGLG 162 Query: 205 HYRTIADGVSR 215 ++ G+S+ Sbjct: 163 IWKQKIYGISK 173 >gi|119487323|ref|ZP_01621074.1| hypothetical protein L8106_21402 [Lyngbya sp. PCC 8106] gi|119455878|gb|EAW37013.1| hypothetical protein L8106_21402 [Lyngbya sp. PCC 8106] Length = 413 Score = 38.5 bits (88), Expect = 0.96, Method: Compositional matrix adjust. Identities = 21/64 (32%), Positives = 34/64 (53%) Query: 84 SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143 +A F R + +RILD G GTG+ L+ +P +G+D+S A+ +AK Sbjct: 38 AAYNFCTGRTPPTENIRILDAGCGTGSSTEYLIGLNPQATVLGMDLSEGAIRVAKERTQR 97 Query: 144 NGVS 147 +G+S Sbjct: 98 SGIS 101 >gi|324326861|gb|ADY22121.1| methyltransferase [Bacillus thuringiensis serovar finitimus YBT-020] Length = 261 Score = 38.5 bits (88), Expect = 0.97, Method: Compositional matrix adjust. Identities = 23/61 (37%), Positives = 35/61 (57%), Gaps = 4/61 (6%) Query: 86 LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG-VGVDISCKALEIAKSNAVTN 144 L + + ++E R R+LD+ TG G V L +P FK V +D++ K LE AK ++N Sbjct: 30 LQYVVQQVESRHNNRLLDIATGGGHVANVL---APLFKEVVALDLTEKMLENAKKFIISN 86 Query: 145 G 145 G Sbjct: 87 G 87 >gi|309811280|ref|ZP_07705069.1| methyltransferase small domain protein [Dermacoccus sp. Ellin185] gi|308434762|gb|EFP58605.1| methyltransferase small domain protein [Dermacoccus sp. Ellin185] Length = 221 Score = 38.5 bits (88), Expect = 0.97, Method: Compositional matrix adjust. Identities = 25/72 (34%), Positives = 34/72 (47%), Gaps = 2/72 (2%) Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 LD+G G G + L SP + GVD++ +AL++ N G S S V Sbjct: 63 LDVGCGWGPITTTLALRSPSAQVWGVDVNRRALDLCADNVAAQGCSNVAVAQPSQVPDHV 122 Query: 162 EGLFDVIVSNPP 173 FD+I SNPP Sbjct: 123 R--FDLIWSNPP 132 >gi|52142621|ref|YP_084208.1| methyltransferase [Bacillus cereus E33L] gi|51976090|gb|AAU17640.1| methyltransferase [Bacillus cereus E33L] Length = 261 Score = 38.5 bits (88), Expect = 0.97, Method: Compositional matrix adjust. Identities = 23/61 (37%), Positives = 35/61 (57%), Gaps = 4/61 (6%) Query: 86 LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG-VGVDISCKALEIAKSNAVTN 144 L + + ++E R R+LD+ TG G V L +P FK V +D++ K LE AK ++N Sbjct: 30 LQYVVQQVESRHNNRLLDIATGGGHVANVL---APLFKEVVALDLTEKMLENAKKFIISN 86 Query: 145 G 145 G Sbjct: 87 G 87 >gi|88810697|ref|ZP_01125954.1| membrane-associated protein [Nitrococcus mobilis Nb-231] gi|88792327|gb|EAR23437.1| membrane-associated protein [Nitrococcus mobilis Nb-231] Length = 210 Score = 38.5 bits (88), Expect = 0.97, Method: Compositional matrix adjust. Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 3/90 (3%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 V ++ +L R+ + R+LD+G GTG + AL + P+ G+D S + L +A A Sbjct: 28 VSQSVEETLRRVPVQPSDRVLDIGCGTGTLLQALRQRYPYIALTGIDASAEMLAVA---A 84 Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSN 171 G S R + FD++VS Sbjct: 85 AKLGPSARLCLASAQRLPLRGEAFDLVVST 114 >gi|326385019|ref|ZP_08206691.1| methyltransferase small [Gordonia neofelifaecis NRRL B-59395] gi|326196233|gb|EGD53435.1| methyltransferase small [Gordonia neofelifaecis NRRL B-59395] Length = 502 Score = 38.5 bits (88), Expect = 0.97, Method: Compositional matrix adjust. Identities = 39/127 (30%), Positives = 59/127 (46%), Gaps = 15/127 (11%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R LD+GTG G L + V D + +AL +A + A NG +D + F Sbjct: 163 RALDVGTGCGVQALHMASHCDEI--VATDTNRRALALAAATARLNGFD--WDLREGSLFE 218 Query: 160 SVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 V G FD+IVSNPP++ +G +D+ I D G+ G R + + + HLN Sbjct: 219 PVAGERFDLIVSNPPFV-------VGTGAQDY---IYRDSGMVGDDISRQLVEQIGDHLN 268 Query: 219 KDGLCSV 225 G+ + Sbjct: 269 PGGVAQI 275 >gi|319953443|ref|YP_004164710.1| tRNA (adenine-n(6)-)-methyltransferase [Cellulophaga algicola DSM 14237] gi|319422103|gb|ADV49212.1| tRNA (adenine-N(6)-)-methyltransferase [Cellulophaga algicola DSM 14237] Length = 243 Score = 38.5 bits (88), Expect = 0.97, Method: Compositional matrix adjust. Identities = 37/155 (23%), Positives = 63/155 (40%), Gaps = 19/155 (12%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER-------FDTL 153 ILD+G GTG + L L + S +++ A E N + +R FD Sbjct: 40 ILDIGAGTGVISLMLAQRSYAENIEAIELDGDAFEQCTENFEASEWGDRLFCFHAGFDEF 99 Query: 154 QSDWFS---SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210 ++ L+DVIVSNPP+ + G + RD + + + Sbjct: 100 VDEYTEEDPEEAELYDVIVSNPPFYSEEVSS--GDDARD-------QARQNSSLPFDELV 150 Query: 211 DGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245 GVS+ L+ G+ + I Y ++ + + + LF Sbjct: 151 SGVSKLLSPKGIFATIIPYKEEENFIALAAQNNLF 185 >gi|237802005|ref|ZP_04590466.1| N-methyl-transferase related protein [Pseudomonas syringae pv. oryzae str. 1_6] gi|331024862|gb|EGI04918.1| N-methyl-transferase related protein [Pseudomonas syringae pv. oryzae str. 1_6] Length = 237 Score = 38.5 bits (88), Expect = 0.97, Method: Compositional matrix adjust. Identities = 37/120 (30%), Positives = 61/120 (50%), Gaps = 14/120 (11%) Query: 63 VRLTLSSDTFEPRP--ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120 V L L + + P + LLV++ + +L R +LDLG G+G + ++L + P Sbjct: 50 VELFLPPNVYHPGTGLSSSLLVEALSSENLGR-------AVLDLGCGSGYIGISLYR--P 100 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVI 179 V DIS ++ + N + R L+SD FS+++GL FD I+ NPP ++ I Sbjct: 101 GMDLVLADISKDSILSSTENLRRMEIPGR--VLESDLFSNLKGLRFDTILFNPPLLDKKI 158 >gi|239616418|ref|YP_002939740.1| methyltransferase [Kosmotoga olearia TBF 19.5.1] gi|239505249|gb|ACR78736.1| methyltransferase [Kosmotoga olearia TBF 19.5.1] Length = 187 Score = 38.5 bits (88), Expect = 0.97, Method: Compositional matrix adjust. Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 7/91 (7%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 +R+LDL +G+G + L S V +D S + K NA+ G E+ L +D+ Sbjct: 42 LRVLDLFSGSGIIAFEALSRSA-TNAVCIDSSRVSCNTIKKNALKLGCQEKLRILCADFR 100 Query: 159 SSVEGL------FDVIVSNPPYIESVIVDCL 183 ++ L FD I ++PP+ E+ I + L Sbjct: 101 RAIPKLEKSGERFDFIFADPPFGENYIPELL 131 >gi|168218269|ref|ZP_02643894.1| conserved hypothetical protein [Clostridium perfringens NCTC 8239] gi|182379728|gb|EDT77207.1| conserved hypothetical protein [Clostridium perfringens NCTC 8239] Length = 256 Score = 38.5 bits (88), Expect = 0.97, Method: Compositional matrix adjust. Identities = 26/97 (26%), Positives = 46/97 (47%), Gaps = 6/97 (6%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 VD+ L + + ++ V LDL TGTG + + + + VG++I + E+A +A Sbjct: 40 VDAVLLANFANVNRKHSV--LDLCTGTGIIPFIIYGKKNPKEVVGIEIQEEFAEMANRSA 97 Query: 142 VTNGVSERFD----TLQSDWFSSVEGLFDVIVSNPPY 174 N + ++ L+ + FDV+ NPPY Sbjct: 98 KINNIQDKVSFVCGDLKDKELNKSMPKFDVVTVNPPY 134 >gi|16803926|ref|NP_465411.1| hypothetical protein lmo1887 [Listeria monocytogenes EGD-e] gi|224500239|ref|ZP_03668588.1| hypothetical protein LmonF1_11379 [Listeria monocytogenes Finland 1988] gi|224501314|ref|ZP_03669621.1| hypothetical protein LmonFR_02125 [Listeria monocytogenes FSL R2-561] gi|254827229|ref|ZP_05231916.1| conserved hypothetical protein [Listeria monocytogenes FSL N3-165] gi|254831513|ref|ZP_05236168.1| hypothetical protein Lmon1_09168 [Listeria monocytogenes 10403S] gi|254899417|ref|ZP_05259341.1| hypothetical protein LmonJ_06374 [Listeria monocytogenes J0161] gi|254912444|ref|ZP_05262456.1| methyltransferase [Listeria monocytogenes J2818] gi|254936771|ref|ZP_05268468.1| conserved hypothetical protein [Listeria monocytogenes F6900] gi|255026341|ref|ZP_05298327.1| hypothetical protein LmonocytFSL_08325 [Listeria monocytogenes FSL J2-003] gi|284802332|ref|YP_003414197.1| hypothetical protein LM5578_2088 [Listeria monocytogenes 08-5578] gi|284995474|ref|YP_003417242.1| hypothetical protein LM5923_2039 [Listeria monocytogenes 08-5923] gi|315282908|ref|ZP_07871210.1| protein YpsC [Listeria marthii FSL S4-120] gi|16411340|emb|CAC99965.1| lmo1887 [Listeria monocytogenes EGD-e] gi|258599612|gb|EEW12937.1| conserved hypothetical protein [Listeria monocytogenes FSL N3-165] gi|258609367|gb|EEW21975.1| conserved hypothetical protein [Listeria monocytogenes F6900] gi|284057894|gb|ADB68835.1| hypothetical protein LM5578_2088 [Listeria monocytogenes 08-5578] gi|284060941|gb|ADB71880.1| hypothetical protein LM5923_2039 [Listeria monocytogenes 08-5923] gi|293590427|gb|EFF98761.1| methyltransferase [Listeria monocytogenes J2818] gi|313613446|gb|EFR87288.1| protein YpsC [Listeria marthii FSL S4-120] Length = 382 Score = 38.5 bits (88), Expect = 0.97, Method: Compositional matrix adjust. Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 3/54 (5%) Query: 125 VGVDISCKALEIAKSNAVTNGVSE--RFDTLQSDWFSSVEGLFDVIVSNPPYIE 176 +G DI + +EIAK NAV G+ + F LQ F + E + V+V+NPPY E Sbjct: 256 IGGDIDARLIEIAKQNAVEAGLGDLITFRQLQVADFQT-EDEYGVVVANPPYGE 308 >gi|134299906|ref|YP_001113402.1| PUA domain-containing protein [Desulfotomaculum reducens MI-1] gi|134052606|gb|ABO50577.1| SAM-dependent methyltransferase [Desulfotomaculum reducens MI-1] Length = 418 Score = 38.5 bits (88), Expect = 0.97, Method: Compositional matrix adjust. Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 11/82 (13%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER--------FD 151 R+LD TG + K + +G+DI+ ALE+A+ NA NG +R FD Sbjct: 246 RVLDCFCHTGTFSMYATKYGAK-EVLGLDIAAPALEVARVNAQLNGYGDRCTFKECNSFD 304 Query: 152 TLQSDWFSSVEGLFDVIVSNPP 173 L++ E FDV++ +PP Sbjct: 305 ELRA--MERAEEKFDVVILDPP 324 >gi|84516360|ref|ZP_01003720.1| hypothetical protein SKA53_05478 [Loktanella vestfoldensis SKA53] gi|84510056|gb|EAQ06513.1| hypothetical protein SKA53_05478 [Loktanella vestfoldensis SKA53] Length = 401 Score = 38.5 bits (88), Expect = 0.97, Method: Compositional matrix adjust. Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 6/55 (10%) Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPP 173 + +D S AL++A+ A GV++RF T + D F + L FDV++ +PP Sbjct: 254 LAIDGSAPALDLAEQGAAAMGVADRFSTRKGDAFDVLTALAEEGAQFDVVICDPP 308 >gi|295688864|ref|YP_003592557.1| ribosomal L11 methyltransferase [Caulobacter segnis ATCC 21756] gi|295430767|gb|ADG09939.1| ribosomal L11 methyltransferase [Caulobacter segnis ATCC 21756] Length = 288 Score = 38.5 bits (88), Expect = 0.98, Method: Compositional matrix adjust. Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 1/58 (1%) Query: 93 IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150 I+ R ++LD+G GTG + +A + VG DI ++ IAK NA N + RF Sbjct: 145 IKARKFNKVLDVGAGTGLLAIAAARTGTKL-AVGTDIDKPSVRIAKENAGVNKANARF 201 >gi|253991186|ref|YP_003042542.1| ribosomal protein L11 methyltransferase [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253782636|emb|CAQ85800.1| ribosomal protein L11 methyltransferase [Photorhabdus asymbiotica] Length = 296 Score = 38.5 bits (88), Expect = 0.98, Method: Compositional matrix adjust. Identities = 25/72 (34%), Positives = 41/72 (56%), Gaps = 4/72 (5%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159 I+D G G+G + +A LK +G+DI +A++ ++ NA NGV ER L D + Sbjct: 162 IIDFGCGSGILAIAALKLG-AAHAIGIDIDPQAIQASRDNAERNGVVERLTLYLAKDQPN 220 Query: 160 SVEGLFDVIVSN 171 +E DV+++N Sbjct: 221 DLES--DVVIAN 230 >gi|297563107|ref|YP_003682081.1| methyltransferase small [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296847555|gb|ADH69575.1| methyltransferase small [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 498 Score = 38.5 bits (88), Expect = 0.98, Method: Compositional matrix adjust. Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 6/80 (7%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSD 156 V R LD+GTG G L L + + V D++ +A+ +A + +GV++ R + Q Sbjct: 159 VERALDVGTGCGVQALHLASRA--REVVATDLNPRAVRLAGISLALSGVTDARLE--QGS 214 Query: 157 WFSSVEG-LFDVIVSNPPYI 175 + V G FD+IVSNPP++ Sbjct: 215 LYEPVAGERFDLIVSNPPFV 234 >gi|313127018|ref|YP_004037288.1| methylase involved in ubiquinone/menaquinone biosynthesis [Halogeometricum borinquense DSM 11551] gi|312293383|gb|ADQ67843.1| methylase involved in ubiquinone/menaquinone biosynthesis [Halogeometricum borinquense DSM 11551] Length = 212 Score = 38.5 bits (88), Expect = 0.98, Method: Compositional matrix adjust. Identities = 22/46 (47%), Positives = 29/46 (63%), Gaps = 2/46 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146 +LDLGTGTGA+ LAL ++ + VG DIS LE A+ A G+ Sbjct: 47 VLDLGTGTGAIALALAPDAK--RVVGRDISEGMLEQAREKAQDAGI 90 >gi|254508212|ref|ZP_05120336.1| ribosomal RNA small subunit methyltransferase C [Vibrio parahaemolyticus 16] gi|219548829|gb|EED25830.1| ribosomal RNA small subunit methyltransferase C [Vibrio parahaemolyticus 16] Length = 340 Score = 38.5 bits (88), Expect = 0.98, Method: Compositional matrix adjust. Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 2/75 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LD G G G + + +P + DIS A+E +K+ N +S + SD +S Sbjct: 203 KVLDFGCGAGVIGSVMATLNPEIELEMCDISALAVESSKATLAANQLSGK--VFASDVYS 260 Query: 160 SVEGLFDVIVSNPPY 174 + IVSNPP+ Sbjct: 261 DTSDDYQFIVSNPPF 275 >gi|220934355|ref|YP_002513254.1| methyltransferase type 12 [Thioalkalivibrio sp. HL-EbGR7] gi|219995665|gb|ACL72267.1| methyltransferase type 12 [Thioalkalivibrio sp. HL-EbGR7] Length = 268 Score = 38.5 bits (88), Expect = 0.98, Method: Compositional matrix adjust. Identities = 31/85 (36%), Positives = 41/85 (48%), Gaps = 7/85 (8%) Query: 88 FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147 F + +++R RILD+ TGTG + L++ F V D S + L A N G Sbjct: 51 FFIRALKERGARRILDVATGTGFHSVQLVEAG--FDVVSADGSAEMLAKAFENGRRRGHI 108 Query: 148 ERFDTLQSDW---FSSVEGLFDVIV 169 R T+QSDW V G FD IV Sbjct: 109 LR--TIQSDWRWLNRDVHGRFDAIV 131 >gi|331085151|ref|ZP_08334237.1| type I restriction-modification system [Lachnospiraceae bacterium 9_1_43BFAA] gi|330407934|gb|EGG87424.1| type I restriction-modification system [Lachnospiraceae bacterium 9_1_43BFAA] Length = 531 Score = 38.5 bits (88), Expect = 0.99, Method: Compositional matrix adjust. Identities = 24/90 (26%), Positives = 41/90 (45%), Gaps = 9/90 (10%) Query: 94 EKRDVVRILDLGTGTGAV---CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER- 149 E + +++ D G+G++ C +E + K G +I +A+ N + V Sbjct: 214 EGKKGLQVYDPCMGSGSLMLSCKNYSEEPDYIKYYGQEIMPSTYNLARMNMFLHRVHPEN 273 Query: 150 -----FDTLQSDWFSSVEGLFDVIVSNPPY 174 DTL +DW + + FDV+ NPPY Sbjct: 274 QHLRNADTLDADWPTDEDTEFDVVTMNPPY 303 >gi|325003102|ref|ZP_08124214.1| glycine sarcosine N-methyltransferase [Pseudonocardia sp. P1] Length = 288 Score = 38.5 bits (88), Expect = 0.99, Method: Compositional matrix adjust. Identities = 29/90 (32%), Positives = 43/90 (47%), Gaps = 6/90 (6%) Query: 83 DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142 +S F + ++ KR V +LD+ TGTG + LL+E F V D S + L A N + Sbjct: 57 ESEGKFFVEQLRKRGVKSVLDVATGTGFHSVRLLEEG--FDTVSADGSAEMLAKAFDNGM 114 Query: 143 TNGVSERFDTLQSDW---FSSVEGLFDVIV 169 G +Q+DW V G +D I+ Sbjct: 115 KYG-GHILRVVQADWRWLNRDVHGEYDAII 143 >gi|313632701|gb|EFR99675.1| protein YpsC [Listeria seeligeri FSL N1-067] gi|313637250|gb|EFS02758.1| protein YpsC [Listeria seeligeri FSL S4-171] Length = 382 Score = 38.5 bits (88), Expect = 0.99, Method: Compositional matrix adjust. Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 3/54 (5%) Query: 125 VGVDISCKALEIAKSNAVTNGVSE--RFDTLQSDWFSSVEGLFDVIVSNPPYIE 176 +G DI + +EIAK NAV G+ + F LQ F + E + V+V+NPPY E Sbjct: 256 IGGDIDARLIEIAKQNAVEAGLGDLISFRQLQVADFQT-EDEYGVVVANPPYGE 308 >gi|300312991|ref|YP_003777083.1| 3-demethylubiquinone-9 3-methyl transferase [Herbaspirillum seropedicae SmR1] gi|300075776|gb|ADJ65175.1| 3-demethylubiquinone-9 3-methyl transferase protein [Herbaspirillum seropedicae SmR1] Length = 241 Score = 38.5 bits (88), Expect = 0.99, Method: Compositional matrix adjust. Identities = 23/74 (31%), Positives = 45/74 (60%), Gaps = 9/74 (12%) Query: 100 RILDLGTGTGAVCLALLKESPFFKG---VGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 +++D+G G G +L ES KG G+D+S KAL++A +++ +GV R++ + ++ Sbjct: 59 KVIDIGCGGG-----ILAESMALKGGDVTGIDLSDKALKVADLHSMESGVQVRYEKIAAE 113 Query: 157 WFSSVE-GLFDVIV 169 ++ E G +DV+ Sbjct: 114 DMAAREAGQYDVVT 127 >gi|240171251|ref|ZP_04749910.1| hypothetical protein MkanA1_18201 [Mycobacterium kansasii ATCC 12478] Length = 247 Score = 38.5 bits (88), Expect = 0.99, Method: Compositional matrix adjust. Identities = 34/101 (33%), Positives = 44/101 (43%), Gaps = 12/101 (11%) Query: 74 PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133 P+P E LV AF R E +LD GTG G + + F GVD S A Sbjct: 31 PQPVVEQLV----AFGGIRGE------VLDPGTGPGYHAIHYASQG--FSVTGVDGSPSA 78 Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174 +E A+ NA GV+ F + EG FD +V + Y Sbjct: 79 IERARRNADRAGVTVDFRVADATRLDGFEGRFDTVVDSAFY 119 >gi|239907527|ref|YP_002954268.1| hypothetical protein DMR_28910 [Desulfovibrio magneticus RS-1] gi|239797393|dbj|BAH76382.1| hypothetical protein [Desulfovibrio magneticus RS-1] Length = 266 Score = 38.5 bits (88), Expect = 0.99, Method: Compositional matrix adjust. Identities = 28/83 (33%), Positives = 36/83 (43%), Gaps = 8/83 (9%) Query: 100 RILDLGTGTGAVCLALL--KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 R DLGTG GA L L P +G+D + A NA G++ERF L D Sbjct: 51 RTADLGTGCGAAGLGCLLAGADPAATCLGLDRDPDMVRAAGQNAARLGLAERFTALAVDL 110 Query: 158 FSSVEGL------FDVIVSNPPY 174 E D+++ NPPY Sbjct: 111 RGIREDARCLPESCDLVICNPPY 133 >gi|229564351|sp|A4XQA3|RLMG_PSEMY RecName: Full=Ribosomal RNA large subunit methyltransferase G; AltName: Full=23S rRNA m2G1835 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rlmG Length = 374 Score = 38.5 bits (88), Expect = 0.99, Method: Compositional matrix adjust. Identities = 27/94 (28%), Positives = 46/94 (48%), Gaps = 4/94 (4%) Query: 90 LPRIEKR-DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148 LP + + D R+ DLG G G + +A SP + VD S A++ A+ N + E Sbjct: 223 LPHLPRHLDARRVADLGCGNGVLGIAYALGSPQAQLTLVDESYMAVQSARENWAA-ALGE 281 Query: 149 RFDTLQS--DWFSSVEGLFDVIVSNPPYIESVIV 180 R T+++ G D+++ NPP+ + +V Sbjct: 282 RPATIRAGDGLAEQPAGSLDLVLCNPPFHQQQVV 315 >gi|238898007|ref|YP_002923687.1| methylation of 50S ribosomal subunit protein L11 [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|259534540|sp|C4K4P6|PRMA_HAMD5 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11 Mtase gi|229465765|gb|ACQ67539.1| methylation of 50S ribosomal subunit protein L11 [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 305 Score = 38.5 bits (88), Expect = 0.99, Method: Compositional matrix adjust. Identities = 19/50 (38%), Positives = 31/50 (62%), Gaps = 1/50 (2%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150 ++D G G+G + +A LK + +G+DI +A+E ++ NA NGVSE Sbjct: 169 LIDFGCGSGILAIAALKLGAK-QAIGIDIDPQAIEASRDNAQRNGVSEHL 217 >gi|182437096|ref|YP_001824815.1| putative methyltransferase [Streptomyces griseus subsp. griseus NBRC 13350] gi|178465612|dbj|BAG20132.1| putative methyltransferase [Streptomyces griseus subsp. griseus NBRC 13350] Length = 527 Score = 38.5 bits (88), Expect = 0.99, Method: Compositional matrix adjust. Identities = 37/131 (28%), Positives = 55/131 (41%), Gaps = 15/131 (11%) Query: 95 KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154 + V LD+GTG+G L + + + D++ +ALE + +G + D + Sbjct: 175 RAPVASALDIGTGSGIQALHAAQHA--SRVTATDLNPRALEFTRLTLALSGAAP-ADLRE 231 Query: 155 SDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213 F V FD+IVSNPP+ VI L R DGG+ G R + Sbjct: 232 GSLFEPVGSDTFDLIVSNPPF---VISPGARLTYR--------DGGMGGDDLCRALVQQS 280 Query: 214 SRHLNKDGLCS 224 HLN+ G Sbjct: 281 GAHLNEGGYAQ 291 >gi|169632498|ref|YP_001706234.1| ribosomal RNA small subunit methyltransferase C (rRNA (guanine-N(2)-)-methyltransferase) (16S rRNA m2G1207 methyltransferase) [Acinetobacter baumannii SDF] gi|226712934|sp|B0VRJ4|RSMC_ACIBS RecName: Full=Ribosomal RNA small subunit methyltransferase C; AltName: Full=16S rRNA m2G1207 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rsmC gi|169151290|emb|CAO99988.1| ribosomal RNA small subunit methyltransferase C (rRNA (guanine-N(2)-)-methyltransferase) (16S rRNA m2G1207 methyltransferase) [Acinetobacter baumannii] Length = 337 Score = 38.5 bits (88), Expect = 0.99, Method: Compositional matrix adjust. Identities = 34/135 (25%), Positives = 54/135 (40%), Gaps = 3/135 (2%) Query: 47 KHESIHRILGWRDFYNVRLTLSSDTFEPRPE--TELLVDSALAFSLPRIEKRDVVRILDL 104 K E I + W Y V++ T P ++ +D A LP + + RI D Sbjct: 142 KTEKIKPLESWLKTYTVQVNEQELTICALPGVFSQTHLDVGTAVLLPYLNQVKSGRIADF 201 Query: 105 GTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV-SERFDTLQSDWFSSVEG 163 G G G + L K + +DI AL+ + NG+ S++ + Sbjct: 202 GCGAGIISCYLAKANSSNIIHALDIDAFALQSTEMTFSRNGIGSDQLRLQPVTGIADAPT 261 Query: 164 LFDVIVSNPPYIESV 178 D IVSNPP+ + + Sbjct: 262 ELDAIVSNPPFHQGI 276 >gi|196042018|ref|ZP_03109304.1| methyltransferase, UbiE/COQ5 family [Bacillus cereus NVH0597-99] gi|229091895|ref|ZP_04223084.1| Methyltransferase type 11 [Bacillus cereus Rock3-42] gi|196027152|gb|EDX65773.1| methyltransferase, UbiE/COQ5 family [Bacillus cereus NVH0597-99] gi|228691475|gb|EEL45234.1| Methyltransferase type 11 [Bacillus cereus Rock3-42] Length = 261 Score = 38.5 bits (88), Expect = 0.99, Method: Compositional matrix adjust. Identities = 23/61 (37%), Positives = 35/61 (57%), Gaps = 4/61 (6%) Query: 86 LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG-VGVDISCKALEIAKSNAVTN 144 L + + ++E R R+LD+ TG G V L +P FK V +D++ K LE AK ++N Sbjct: 30 LQYVVQQVESRHNNRLLDIATGGGHVANVL---APLFKEVVALDLTEKMLENAKKFIISN 86 Query: 145 G 145 G Sbjct: 87 G 87 >gi|116629510|ref|YP_814682.1| ribosomal protein L11 methylase [Lactobacillus gasseri ATCC 33323] gi|311110846|ref|ZP_07712243.1| ribosomal protein L11 methyltransferase [Lactobacillus gasseri MV-22] gi|122273552|sp|Q043X8|PRMA_LACGA RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11 Mtase gi|116095092|gb|ABJ60244.1| [LSU ribosomal protein L11P]-lysine N-methyltransferase [Lactobacillus gasseri ATCC 33323] gi|311066000|gb|EFQ46340.1| ribosomal protein L11 methyltransferase [Lactobacillus gasseri MV-22] Length = 315 Score = 38.5 bits (88), Expect = 0.99, Method: Compositional matrix adjust. Identities = 27/102 (26%), Positives = 53/102 (51%), Gaps = 8/102 (7%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 + +LD+GTG+G + +A K +G DIS +A+ AK N N V+ + +++ Sbjct: 179 MSVLDIGTGSGILAIAASKLGASHV-LGTDISDEAVTAAKENIALNDVN-NINVRKANLL 236 Query: 159 SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200 ++ +D+IV+N ++ D L + D D ++ +G + Sbjct: 237 KDIDDKYDLIVAN------ILADILLELIPDLDSHLNKEGKV 272 >gi|317058263|ref|ZP_07922748.1| ribosomal protein L11 methyltransferase [Fusobacterium sp. 3_1_5R] gi|313683939|gb|EFS20774.1| ribosomal protein L11 methyltransferase [Fusobacterium sp. 3_1_5R] Length = 313 Score = 38.5 bits (88), Expect = 1.00, Method: Compositional matrix adjust. Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 3/73 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSDWFS 159 +LD+GTG+G + + K F GVDI A+E+A N N VS E++ L + Sbjct: 179 VLDVGTGSGILMIVAEKLGAGFV-CGVDIDELAVEVANENLELNKVSKEKYKVLHGNLIE 237 Query: 160 SVEGL-FDVIVSN 171 +E +DV+V+N Sbjct: 238 KIEKQSYDVVVAN 250 >gi|289435234|ref|YP_003465106.1| hypothetical protein lse_1871 [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289171478|emb|CBH28022.1| conserved hypothetical protein [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 382 Score = 38.5 bits (88), Expect = 1.00, Method: Compositional matrix adjust. Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 3/54 (5%) Query: 125 VGVDISCKALEIAKSNAVTNGVSE--RFDTLQSDWFSSVEGLFDVIVSNPPYIE 176 +G DI + +EIAK NAV G+ + F LQ F + E + V+V+NPPY E Sbjct: 256 IGGDIDARLIEIAKQNAVEAGLGDLISFRQLQVADFQT-EDEYGVVVANPPYGE 308 >gi|220936044|ref|YP_002514943.1| methyltransferase small [Thioalkalivibrio sp. HL-EbGR7] gi|219997354|gb|ACL73956.1| methyltransferase small [Thioalkalivibrio sp. HL-EbGR7] Length = 195 Score = 38.5 bits (88), Expect = 1.00, Method: Compositional matrix adjust. Identities = 32/103 (31%), Positives = 47/103 (45%), Gaps = 7/103 (6%) Query: 72 FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131 F PR +D+ L +E + LDLG G G + L L + +P + VD Sbjct: 34 FSPRG-----IDAGTRLLLDHVEVGEADDCLDLGCGYGPIGLTLARLAPKGRTCLVDKDF 88 Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPP 173 A++ + NA NG+ + S+ FS+V F VI SN P Sbjct: 89 VAVDYSNKNARINGIGNA-EAFLSNGFSAVGNRRFQVITSNLP 130 >gi|189198237|ref|XP_001935456.1| siroheme synthase [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187981404|gb|EDU48030.1| siroheme synthase [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 487 Score = 38.5 bits (88), Expect = 1.00, Method: Compositional matrix adjust. Identities = 30/106 (28%), Positives = 43/106 (40%), Gaps = 8/106 (7%) Query: 81 LVDSALAFSLPRIEKRDVVRILDLGTGTGAV-CLALLKESPFFKGVGVDISCKALEIAKS 139 L+DS + +R LD+GTG A+ L LK P + DI K+ E A Sbjct: 323 LIDSTSPNYTSNYDPNRQIRGLDIGTGASAIYTLLCLKSRPNWSMCATDIDKKSFESAAR 382 Query: 140 NAVTNGVSERFDTLQSDWFSSVEGL-------FDVIVSNPPYIESV 178 N N + R LQ+ + + L D + NPP+ V Sbjct: 383 NLALNTLMTRTKLLQTTELNPLIPLAALGVDHLDFTICNPPFFNDV 428 >gi|24372535|ref|NP_716577.1| hypothetical protein SO_0948 [Shewanella oneidensis MR-1] gi|24346547|gb|AAN54022.1|AE015540_2 conserved hypothetical protein [Shewanella oneidensis MR-1] Length = 220 Score = 38.5 bits (88), Expect = 1.00, Method: Compositional matrix adjust. Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 6/82 (7%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD--- 156 +ILD+G G+G + L + S + V++ KA N V + ++R + D Sbjct: 21 QILDIGAGSGLLSLMAAQRS-LGRITAVELEEKAAAACLYNMVQSPWADRLSVIHCDIQD 79 Query: 157 --WFSSVEGLFDVIVSNPPYIE 176 + G FD I+ NPPY E Sbjct: 80 FCQQTQYHGFFDHIICNPPYFE 101 >gi|121601757|ref|YP_989216.1| ribosomal protein L11 methyltransferase [Bartonella bacilliformis KC583] gi|120613934|gb|ABM44535.1| ribosomal protein L11 methyltransferase [Bartonella bacilliformis KC583] Length = 291 Score = 38.5 bits (88), Expect = 1.00, Method: Compositional matrix adjust. Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 11/87 (12%) Query: 93 IEKRDVVRILDLGTGTG--AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150 ++ + LDLGTG+G A+ +A+LK P DI A+++A+ N NGV + Sbjct: 146 VQNENPQNALDLGTGSGVLAIAIAMLKPIPVLAS---DIDPIAIQVAQHNIKLNGVEKYV 202 Query: 151 DTLQSDWFSSVE------GLFDVIVSN 171 + + F+ + FD+IV+N Sbjct: 203 TAVTASGFNYDDKETVPCAPFDLIVAN 229 >gi|329732227|gb|EGG68577.1| methyltransferase domain protein [Staphylococcus aureus subsp. aureus 21193] Length = 243 Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust. Identities = 27/82 (32%), Positives = 40/82 (48%), Gaps = 3/82 (3%) Query: 90 LPRIEKRDVVRILDLGTGTGAVCLALLKE-SPFFKGVGVDISCKALEIAKSNAVTNGVSE 148 L R + +D +R+LD+G TG V + K + VGVD++ L+IA N N VS Sbjct: 12 LDRAQIKDGMRVLDIGCATGEVTQLIAKRVGANGEVVGVDVNESLLKIANENNQYNNVSY 71 Query: 149 RFDTLQSDWFSSVEGLFDVIVS 170 ++ + G FD IV Sbjct: 72 QYSDIYQ--LPETMGHFDAIVG 91 >gi|300724436|ref|YP_003713756.1| 16S RNA m2G1207 methylase [Xenorhabdus nematophila ATCC 19061] gi|297630973|emb|CBJ91653.1| 16S RNA m2G1207 methylase [Xenorhabdus nematophila ATCC 19061] Length = 337 Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust. Identities = 22/74 (29%), Positives = 40/74 (54%), Gaps = 2/74 (2%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LD+ G+G + L K++P D++ A+ +K+ N + T S+ +S+ Sbjct: 200 LLDIACGSGVLATVLGKKNPDLALTLSDVNAAAITSSKATLKANKLEGSVVT--SNVYSA 257 Query: 161 VEGLFDVIVSNPPY 174 +E F+ IVSNPP+ Sbjct: 258 IEEKFNWIVSNPPF 271 >gi|290890803|ref|ZP_06553870.1| hypothetical protein AWRIB429_1260 [Oenococcus oeni AWRIB429] gi|290479575|gb|EFD88232.1| hypothetical protein AWRIB429_1260 [Oenococcus oeni AWRIB429] Length = 186 Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust. Identities = 27/112 (24%), Positives = 56/112 (50%), Gaps = 10/112 (8%) Query: 75 RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134 RP TE + ++ + P K +V LDL G+G++ + + + K VD + A+ Sbjct: 22 RPTTEKVKEALFSIIAP-YNKPGIV--LDLYAGSGSLGIEAVSRG-YRKAYLVDHARPAI 77 Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPPYIESVIV 180 E+ ++N + E F+ +++ +++ FD+++ +PPY + IV Sbjct: 78 EVIRNNVIATKSPENFEIIKAPASQAIKQFFDNQIRFDLVIFDPPYAKQHIV 129 >gi|290894242|ref|ZP_06557210.1| conserved hypothetical protein [Listeria monocytogenes FSL J2-071] gi|290556181|gb|EFD89727.1| conserved hypothetical protein [Listeria monocytogenes FSL J2-071] Length = 382 Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust. Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 3/54 (5%) Query: 125 VGVDISCKALEIAKSNAVTNGVSE--RFDTLQSDWFSSVEGLFDVIVSNPPYIE 176 +G DI + +EIAK NAV G+ + F LQ F + E + V+V+NPPY E Sbjct: 256 IGGDIDARLIEIAKQNAVEAGLGDLITFRQLQVADFQT-EDEYGVVVANPPYGE 308 >gi|217963961|ref|YP_002349639.1| methyltransferase [Listeria monocytogenes HCC23] gi|217333231|gb|ACK39025.1| methyltransferase [Listeria monocytogenes HCC23] gi|307571469|emb|CAR84648.1| RNA methylase domain protein [Listeria monocytogenes L99] Length = 382 Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust. Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 3/54 (5%) Query: 125 VGVDISCKALEIAKSNAVTNGVSE--RFDTLQSDWFSSVEGLFDVIVSNPPYIE 176 +G DI + +EIAK NAV G+ + F LQ F + E + V+V+NPPY E Sbjct: 256 IGGDIDARLIEIAKQNAVEAGLGDLITFRQLQVADFQT-EDEYGVVVANPPYGE 308 >gi|254852790|ref|ZP_05242138.1| conserved hypothetical protein [Listeria monocytogenes FSL R2-503] gi|300763803|ref|ZP_07073800.1| methyltransferase [Listeria monocytogenes FSL N1-017] gi|258606117|gb|EEW18725.1| conserved hypothetical protein [Listeria monocytogenes FSL R2-503] gi|300515539|gb|EFK42589.1| methyltransferase [Listeria monocytogenes FSL N1-017] Length = 382 Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust. Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 3/54 (5%) Query: 125 VGVDISCKALEIAKSNAVTNGVSE--RFDTLQSDWFSSVEGLFDVIVSNPPYIE 176 +G DI + +EIAK NAV G+ + F LQ F + E + V+V+NPPY E Sbjct: 256 IGGDIDARLIEIAKQNAVEAGLGDLITFRQLQVADFQT-EDEYGVVVANPPYGE 308 >gi|323450036|gb|EGB05920.1| hypothetical protein AURANDRAFT_66085 [Aureococcus anophagefferens] Length = 1652 Score = 38.5 bits (88), Expect = 1.0, Method: Composition-based stats. Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 4/75 (5%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ---SD 156 RIL+LG GTGAV L + P + D+ +AL + ++NA NGV++R D Sbjct: 313 RILELGAGTGAVGLWIALRYPTARVTLTDLP-EALPLIRANAALNGVADRVRVAPLAFGD 371 Query: 157 WFSSVEGLFDVIVSN 171 S + FDV+V + Sbjct: 372 PVPSEDDPFDVVVGS 386 >gi|315127803|ref|YP_004069806.1| 50S ribosomal protein L11 methyltransferase [Pseudoalteromonas sp. SM9913] gi|315016317|gb|ADT69655.1| 50S ribosomal protein L11 methyltransferase [Pseudoalteromonas sp. SM9913] Length = 293 Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust. Identities = 31/111 (27%), Positives = 57/111 (51%), Gaps = 16/111 (14%) Query: 74 PRPET-ELLVDSALAFS----------LPRIEKRDVV--RILDLGTGTGAVCLALLKESP 120 P P+ +L+D LAF L +E +D+ ++D G G+G + +A +K Sbjct: 122 PDPDAVNVLLDPGLAFGTGTHATTALCLKWLESQDLTGKTVVDFGCGSGILGIAAIKLGA 181 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSN 171 + +G+DI +ALE + NA NGV+++ + + + E D++V+N Sbjct: 182 E-RMIGIDIDPQALEASLDNANRNGVADKLEVYLPE--NQPEFTADIVVAN 229 >gi|313623187|gb|EFR93445.1| protein YpsC [Listeria innocua FSL J1-023] Length = 382 Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust. Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 3/54 (5%) Query: 125 VGVDISCKALEIAKSNAVTNGVSE--RFDTLQSDWFSSVEGLFDVIVSNPPYIE 176 +G DI + +EIAK NAV G+ + F LQ F + E + V+V+NPPY E Sbjct: 256 IGGDIDARLIEIAKQNAVEAGLGDLITFRQLQVADFQT-EDEYGVVVANPPYGE 308 >gi|291543369|emb|CBL16478.1| Predicted O-methyltransferase [Ruminococcus sp. 18P13] Length = 240 Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust. Identities = 25/96 (26%), Positives = 44/96 (45%), Gaps = 5/96 (5%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 D+ L + R + RDV DLGTG G + L + + P + G+DI +A+ + + Sbjct: 23 TDAFLLAAFSRYQARDVA--CDLGTGCGIIPLVMERHMPPRQIYGLDIQPEAIRLLEQTV 80 Query: 142 VTN---GVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174 N ++ L++ W + ++ NPPY Sbjct: 81 AENRLTNLTPVLGDLRTLWADAPLEQCTLVTCNPPY 116 >gi|237837693|ref|XP_002368144.1| hypothetical protein TGME49_032750 [Toxoplasma gondii ME49] gi|211965808|gb|EEB01004.1| hypothetical protein TGME49_032750 [Toxoplasma gondii ME49] gi|221488591|gb|EEE26805.1| conserved hypothetical protein [Toxoplasma gondii GT1] gi|221509090|gb|EEE34659.1| conserved hypothetical protein [Toxoplasma gondii VEG] Length = 383 Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust. Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 7/87 (8%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE----RFDTLQ 154 +++LD+G G V L + VG DIS ++LE+A+ N NG+ R Sbjct: 128 IKVLDIGVGANCVYPLLGCTEYGWTFVGSDISERSLELARENVNLNGLEPCVHLRHQQDP 187 Query: 155 SDWFSSV---EGLFDVIVSNPPYIESV 178 + +FS V LF + + NPP+ ES Sbjct: 188 AKFFSGVVENGELFALSMCNPPFHEST 214 >gi|57242392|ref|ZP_00370330.1| conserved hypothetical protein [Campylobacter upsaliensis RM3195] gi|57016677|gb|EAL53460.1| conserved hypothetical protein [Campylobacter upsaliensis RM3195] Length = 373 Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust. Identities = 33/114 (28%), Positives = 47/114 (41%), Gaps = 26/114 (22%) Query: 78 TELLVDSALAFSLPRIEKRDVVRILDLGTGTG------AVCLALLKESPFFKGVGVDISC 131 + LV++ I+ +D V +LD G+G A+ + + F K +G DI Sbjct: 21 ADFLVNAVYTMLKMHIDSKDYV-LLDSSCGSGNFLRTEAIIKSGFAKDSFSKIIGTDIDK 79 Query: 132 KALEIAK-----------SNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174 AL IAK NA+ N E F Q+D +IV NPPY Sbjct: 80 MALHIAKRTLDSRVILLHKNALHNVTREHFSITQTDKL--------IIVGNPPY 125 >gi|326777711|ref|ZP_08236976.1| methyltransferase small [Streptomyces cf. griseus XylebKG-1] gi|326658044|gb|EGE42890.1| methyltransferase small [Streptomyces cf. griseus XylebKG-1] Length = 510 Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust. Identities = 37/131 (28%), Positives = 55/131 (41%), Gaps = 15/131 (11%) Query: 95 KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154 + V LD+GTG+G L + + + D++ +ALE + +G + D + Sbjct: 158 RAPVASALDIGTGSGIQALHAAQHA--SRVTATDLNPRALEFTRLTLALSGAAP-ADLRE 214 Query: 155 SDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213 F V FD+IVSNPP+ VI L R DGG+ G R + Sbjct: 215 GSLFEPVGSDTFDLIVSNPPF---VISPGARLTYR--------DGGMGGDDLCRALVQRS 263 Query: 214 SRHLNKDGLCS 224 HLN+ G Sbjct: 264 GAHLNEGGYAQ 274 >gi|270004358|gb|EFA00806.1| hypothetical protein TcasGA2_TC003693 [Tribolium castaneum] Length = 734 Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust. Identities = 22/71 (30%), Positives = 39/71 (54%), Gaps = 5/71 (7%) Query: 105 GTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL 164 G G A+ A + + + +DI K +E+A++NA GV+++ D + D+F GL Sbjct: 584 GAGGNAIQFAFTCK----RVIAIDIDPKKIELARNNAEVYGVADKIDFIVGDFFHLAPGL 639 Query: 165 F-DVIVSNPPY 174 DV+ +PP+ Sbjct: 640 MADVVFFSPPW 650 >gi|253689448|ref|YP_003018638.1| methyltransferase small [Pectobacterium carotovorum subsp. carotovorum PC1] gi|262828548|sp|C6DC08|TRMN6_PECCP RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName: Full=tRNA m6A37 methyltransferase gi|251756026|gb|ACT14102.1| methyltransferase small [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 248 Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust. Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 4/87 (4%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQS- 155 V RILD+G+G+G + L L + S + V++ A + AK N + ++R Sbjct: 48 VTRILDIGSGSGLLALMLAQRSDTHVRIDAVELDSAASQQAKENISASPWADRIAVYAED 107 Query: 156 --DWFSSVEGLFDVIVSNPPYIESVIV 180 D+ + + +I+SNPPY I Sbjct: 108 IIDFADTRSADYSLIISNPPYFPPGIA 134 >gi|238062048|ref|ZP_04606757.1| SAM-dependent methyltransferase [Micromonospora sp. ATCC 39149] gi|237883859|gb|EEP72687.1| SAM-dependent methyltransferase [Micromonospora sp. ATCC 39149] Length = 494 Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust. Identities = 20/57 (35%), Positives = 32/57 (56%) Query: 93 IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 +E R+LDLG G GA+ AL+ + + + VG D+S +AL +A + + ER Sbjct: 289 LEASGATRVLDLGCGPGALLSALVGDRRYTEIVGTDVSTQALTLAARRLRLDRLPER 345 >gi|218297324|ref|ZP_03497949.1| methyltransferase small [Thermus aquaticus Y51MC23] gi|218242361|gb|EED08904.1| methyltransferase small [Thermus aquaticus Y51MC23] Length = 251 Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust. Identities = 33/127 (25%), Positives = 55/127 (43%), Gaps = 15/127 (11%) Query: 102 LDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 LDL +G+G + L S F V V+I+ A ++ N + NG +R + Sbjct: 23 LDLCSGSG---IQALHCSSFAASVDAVEINPLARQVLWCNVLLNGRHDRIQVWGGSLYDE 79 Query: 161 VEG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 + +D++V+NPP + + D GGIDG + R I G+ HL+ Sbjct: 80 LPENRQYDLVVANPPLVPFP---------EELDYPFVGHGGIDGFAVTRKIIQGLPEHLS 130 Query: 219 KDGLCSV 225 + G + Sbjct: 131 ETGRAQI 137 >gi|116873322|ref|YP_850103.1| hypothetical protein lwe1906 [Listeria welshimeri serovar 6b str. SLCC5334] gi|116742200|emb|CAK21324.1| conserved hypothetical protein [Listeria welshimeri serovar 6b str. SLCC5334] Length = 382 Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust. Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 3/54 (5%) Query: 125 VGVDISCKALEIAKSNAVTNGVSE--RFDTLQSDWFSSVEGLFDVIVSNPPYIE 176 +G DI + +EIAK NAV G+ + F LQ F + E + V+V+NPPY E Sbjct: 256 IGGDIDARLIEIAKQNAVEAGLGDLITFRQLQVADFQT-EDEYGVVVANPPYGE 308 >gi|301054412|ref|YP_003792623.1| methyltransferase [Bacillus anthracis CI] gi|300376581|gb|ADK05485.1| methyltransferase [Bacillus cereus biovar anthracis str. CI] Length = 261 Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust. Identities = 23/61 (37%), Positives = 35/61 (57%), Gaps = 4/61 (6%) Query: 86 LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG-VGVDISCKALEIAKSNAVTN 144 L + + ++E R R+LD+ TG G V L +P FK V +D++ K LE AK ++N Sbjct: 30 LQYVVQQVESRHNNRLLDIATGGGHVANVL---APLFKEVVALDLTEKMLENAKKFIISN 86 Query: 145 G 145 G Sbjct: 87 G 87 >gi|268322271|emb|CBH32793.1| putative O-methyltransferase [Streptomyces sp. C23201NS3] Length = 339 Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust. Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 2/76 (2%) Query: 97 DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 D+ ++D+ G GA+ A+LK +P +GV D + + A+ N +GV++R + + D Sbjct: 172 DIGTLVDVAGGRGALLSAVLKANPKTRGVLYD-QPEVVSEARQNFARSGVADRVEIIGGD 230 Query: 157 WFSSVEGLFDV-IVSN 171 +FSSV D ++SN Sbjct: 231 FFSSVPPAGDAYLLSN 246 >gi|220673234|emb|CAX12680.1| novel protein similar to vertebrate trimethylguanosine synthase homolog (S. cerevisiae) (TGS1) [Danio rerio] Length = 180 Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust. Identities = 39/151 (25%), Positives = 71/151 (47%), Gaps = 14/151 (9%) Query: 105 GTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL 164 G G A+ AL + + +G+DI L +A+ NA GV +R D LQ D+ L Sbjct: 33 GVGGNAIQFALTGK----RVIGIDIDPVRLALAQHNAAVYGVEQRIDFLQGDFLQLAPHL 88 Query: 165 -FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV----SRHLNK 219 D++ +PP+ + L +V + ++ D G + + I+D + R+ + Sbjct: 89 RGDMVFLSPPWGGP---EYLTADVFNIQTMMTPD-GFEIFRLSKMISDNIVYFLPRNADM 144 Query: 220 DGLCSVEIGYNQKVDVVRIFESRKLFLVNAF 250 + + S+ G KV+V + F + KL + A+ Sbjct: 145 EQIASLA-GPGGKVEVEQNFLNNKLKTITAY 174 >gi|189235563|ref|XP_969535.2| PREDICTED: similar to prip interacting protein, pimt [Tribolium castaneum] Length = 797 Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust. Identities = 22/71 (30%), Positives = 39/71 (54%), Gaps = 5/71 (7%) Query: 105 GTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL 164 G G A+ A + + + +DI K +E+A++NA GV+++ D + D+F GL Sbjct: 647 GAGGNAIQFAFTCK----RVIAIDIDPKKIELARNNAEVYGVADKIDFIVGDFFHLAPGL 702 Query: 165 F-DVIVSNPPY 174 DV+ +PP+ Sbjct: 703 MADVVFFSPPW 713 >gi|196032007|ref|ZP_03099421.1| methyltransferase, UbiE/COQ5 family [Bacillus cereus W] gi|218904009|ref|YP_002451843.1| methyltransferase, UbiE/COQ5 family [Bacillus cereus AH820] gi|228915486|ref|ZP_04079075.1| Methyltransferase type 11 [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228934157|ref|ZP_04096996.1| Methyltransferase type 11 [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228946498|ref|ZP_04108814.1| Methyltransferase type 11 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|195994758|gb|EDX58712.1| methyltransferase, UbiE/COQ5 family [Bacillus cereus W] gi|218539882|gb|ACK92280.1| methyltransferase, UbiE/COQ5 family [Bacillus cereus AH820] gi|228813176|gb|EEM59481.1| Methyltransferase type 11 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228825325|gb|EEM71119.1| Methyltransferase type 11 [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228844133|gb|EEM89193.1| Methyltransferase type 11 [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 261 Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust. Identities = 23/61 (37%), Positives = 35/61 (57%), Gaps = 4/61 (6%) Query: 86 LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG-VGVDISCKALEIAKSNAVTN 144 L + + ++E R R+LD+ TG G V L +P FK V +D++ K LE AK ++N Sbjct: 30 LQYVVQQVESRHNNRLLDIATGGGHVANVL---APLFKEVVALDLTEKMLENAKKFIISN 86 Query: 145 G 145 G Sbjct: 87 G 87 >gi|163788804|ref|ZP_02183249.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Flavobacteriales bacterium ALC-1] gi|159876041|gb|EDP70100.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Flavobacteriales bacterium ALC-1] Length = 484 Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust. Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 2/87 (2%) Query: 62 NVRLTLSSDTFEPRPE-TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120 N +++ S F+ P+ E L + ++L E D +LDL GTG + + ++ Sbjct: 300 NFEISMKS-FFQTNPKCAEKLYSKVVDYALEIKEAIDNTVVLDLFCGTGTIGQIIASKAN 358 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVS 147 K VGVDI A+E AK NA N + Sbjct: 359 NTKIVGVDIVASAIEDAKENAKRNNIE 385 >gi|49477893|ref|YP_036968.1| methyltransferase [Bacillus thuringiensis serovar konkukian str. 97-27] gi|228927937|ref|ZP_04090982.1| Methyltransferase type 11 [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|229122432|ref|ZP_04251645.1| Methyltransferase type 11 [Bacillus cereus 95/8201] gi|49329449|gb|AAT60095.1| methyltransferase [Bacillus thuringiensis serovar konkukian str. 97-27] gi|228660993|gb|EEL16620.1| Methyltransferase type 11 [Bacillus cereus 95/8201] gi|228831627|gb|EEM77219.1| Methyltransferase type 11 [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] Length = 261 Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust. Identities = 23/61 (37%), Positives = 35/61 (57%), Gaps = 4/61 (6%) Query: 86 LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG-VGVDISCKALEIAKSNAVTN 144 L + + ++E R R+LD+ TG G V L +P FK V +D++ K LE AK ++N Sbjct: 30 LQYVVQQVESRHNNRLLDIATGGGHVANVL---APLFKEVVALDLTEKMLENAKKFIISN 86 Query: 145 G 145 G Sbjct: 87 G 87 >gi|332361795|gb|EGJ39599.1| ribosomal RNA small subunit methyltransferase D [Streptococcus sanguinis SK1056] Length = 182 Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust. Identities = 34/131 (25%), Positives = 57/131 (43%), Gaps = 16/131 (12%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+LD G+G + + + + V V+ +A I N ERFD L+ + Sbjct: 47 RVLDFYAGSGGLAIEAISRG-MEEAVLVEKDRRAQAIISENIQMTKEPERFDLLKMESGR 105 Query: 160 SVE---GLFDVIVSNPPYI-ESVIVDCLGLEVRDF-----------DPRISLDGGIDGLS 204 ++E G FD+++ +PPY E ++ D LE R D + L I GL Sbjct: 106 ALEMLTGSFDLVLLDPPYAKEQIVEDLEKLEERQLLGQDVLVVCETDKEVELPEEIAGLG 165 Query: 205 HYRTIADGVSR 215 ++ G+S+ Sbjct: 166 IWKQKIYGISK 176 >gi|317139487|ref|XP_001817543.2| UMTA methyltransferase family protein [Aspergillus oryzae RIB40] Length = 321 Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust. Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 5/66 (7%) Query: 95 KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154 K DV R+LDLGTGTG + E P + +G D+S + V S D + Sbjct: 85 KNDVQRVLDLGTGTGIWAIDFADEHPSAQVIGTDLSP-----IQPRWVPPTCSFEIDDFE 139 Query: 155 SDWFSS 160 DW + Sbjct: 140 CDWLYT 145 >gi|268326444|emb|CBH40032.1| conserved hypothetical protein, SAM-dependent methyltransferase type 11 family [uncultured archaeon] Length = 260 Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust. Identities = 31/102 (30%), Positives = 55/102 (53%), Gaps = 5/102 (4%) Query: 72 FEPRP--ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129 F+ RP TE ++ F L ++ K+ + +ILD+GTGTG + ++L + + +G+DI Sbjct: 19 FDKRPGDRTEEQRNAWKQFFLEKLGKKPL-KILDVGTGTGFLSISLAEIG--HEVMGIDI 75 Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSN 171 S L A+ A G++ ++ S + FD++VSN Sbjct: 76 SEGMLSQARKKAEKRGLNFDLRIEDAESLSLEDETFDIVVSN 117 >gi|224539919|ref|ZP_03680458.1| hypothetical protein BACCELL_04830 [Bacteroides cellulosilyticus DSM 14838] gi|224518473|gb|EEF87578.1| hypothetical protein BACCELL_04830 [Bacteroides cellulosilyticus DSM 14838] Length = 235 Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust. Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 1/82 (1%) Query: 94 EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153 E +ILD+GTGTG + + L + + ++I A AK N + +R + Sbjct: 34 EAESSQKILDIGTGTGLIAIMLAQRYSLSQITAIEIDEAAAAQAKMNVARSPWIKRIQVI 93 Query: 154 QSDW-FSSVEGLFDVIVSNPPY 174 +D+ E +++IVSNPPY Sbjct: 94 CNDFSLFQTESKYNLIVSNPPY 115 >gi|168215155|ref|ZP_02640780.1| conserved hypothetical protein [Clostridium perfringens CPE str. F4969] gi|170713428|gb|EDT25610.1| conserved hypothetical protein [Clostridium perfringens CPE str. F4969] Length = 256 Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust. Identities = 26/97 (26%), Positives = 46/97 (47%), Gaps = 6/97 (6%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 VD+ L + + ++ V LDL TGTG + + + + VG++I + E+A +A Sbjct: 40 VDAVLLANFANVNRKHSV--LDLCTGTGIIPFIIYGKKNPKEVVGIEIQEEFAEMANRSA 97 Query: 142 VTNGVSERFD----TLQSDWFSSVEGLFDVIVSNPPY 174 N + ++ L+ + FDV+ NPPY Sbjct: 98 KINNIEDKVSFVCGDLKDKELNKSMPKFDVVTVNPPY 134 >gi|16801066|ref|NP_471334.1| hypothetical protein lin2000 [Listeria innocua Clip11262] gi|16414501|emb|CAC97230.1| lin2000 [Listeria innocua Clip11262] Length = 382 Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust. Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 3/54 (5%) Query: 125 VGVDISCKALEIAKSNAVTNGVSE--RFDTLQSDWFSSVEGLFDVIVSNPPYIE 176 +G DI + +EIAK NAV G+ + F LQ F + E + V+V+NPPY E Sbjct: 256 IGGDIDARLIEIAKQNAVEAGLGDLITFRQLQVADFQT-EDEYGVVVANPPYGE 308 >gi|46908119|ref|YP_014508.1| hypothetical protein LMOf2365_1916 [Listeria monocytogenes serotype 4b str. F2365] gi|47094193|ref|ZP_00231909.1| conserved hypothetical protein [Listeria monocytogenes str. 4b H7858] gi|226224490|ref|YP_002758597.1| hypothetical protein Lm4b_01903 [Listeria monocytogenes Clip81459] gi|254826071|ref|ZP_05231072.1| conserved hypothetical protein [Listeria monocytogenes FSL J1-194] gi|254931943|ref|ZP_05265302.1| conserved hypothetical protein [Listeria monocytogenes HPB2262] gi|254993929|ref|ZP_05276119.1| hypothetical protein LmonocytoFSL_13825 [Listeria monocytogenes FSL J2-064] gi|255521246|ref|ZP_05388483.1| hypothetical protein LmonocFSL_08490 [Listeria monocytogenes FSL J1-175] gi|46881389|gb|AAT04685.1| conserved hypothetical protein [Listeria monocytogenes serotype 4b str. F2365] gi|47017438|gb|EAL08255.1| conserved hypothetical protein [Listeria monocytogenes str. 4b H7858] gi|225876952|emb|CAS05661.1| unnamed protein product [Listeria monocytogenes serotype 4b str. CLIP 80459] gi|293583495|gb|EFF95527.1| conserved hypothetical protein [Listeria monocytogenes HPB2262] gi|293595312|gb|EFG03073.1| conserved hypothetical protein [Listeria monocytogenes FSL J1-194] gi|328466237|gb|EGF37394.1| putative N6-adenine-specific DNA methylase [Listeria monocytogenes 1816] gi|328473602|gb|EGF44439.1| putative N6-adenine-specific DNA methylase [Listeria monocytogenes 220] gi|332312328|gb|EGJ25423.1| Protein YpsC [Listeria monocytogenes str. Scott A] Length = 382 Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust. Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 3/54 (5%) Query: 125 VGVDISCKALEIAKSNAVTNGVSE--RFDTLQSDWFSSVEGLFDVIVSNPPYIE 176 +G DI + +EIAK NAV G+ + F LQ F + E + V+V+NPPY E Sbjct: 256 IGGDIDARLIEIAKQNAVEAGLGDLITFRQLQVADFQT-EDEYGVVVANPPYGE 308 >gi|327473427|gb|EGF18847.1| ribosomal RNA small subunit methyltransferase D [Streptococcus sanguinis SK408] Length = 182 Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust. Identities = 36/131 (27%), Positives = 58/131 (44%), Gaps = 16/131 (12%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+LDL G+G++ + L V V+ +A I N ERFD L+ + Sbjct: 47 RVLDLYAGSGSLAIEALSRG-METAVLVEKDRRAQAIISENIQMTKEPERFDLLKMESGR 105 Query: 160 SVE---GLFDVIVSNPPYI-ESVIVDCLGLEVR-----------DFDPRISLDGGIDGLS 204 +E G FD+++ +PPY E ++ D LE R + D + L I GL Sbjct: 106 VLEMLTGSFDLVLLDPPYAKEQIVEDIEKLEERRLLSQDVLVVCETDKDVELPEEIAGLG 165 Query: 205 HYRTIADGVSR 215 ++ G+S+ Sbjct: 166 IWKQKIYGISK 176 >gi|238921360|ref|YP_002934875.1| ribosomal protein L11 methyltransferase [Edwardsiella ictaluri 93-146] gi|259534519|sp|C5BEW8|PRMA_EDWI9 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11 Mtase gi|238870929|gb|ACR70640.1| ribosomal protein L11 methyltransferase, putative [Edwardsiella ictaluri 93-146] Length = 293 Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust. Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 4/72 (5%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159 ++D G G+G + +A LK + +G+DI +A++ ++ NA NGVS R + L D + Sbjct: 162 VIDFGCGSGILAIAALKLG-AARAIGIDIDPQAIQASRDNAERNGVSGRLELYLPKDQPA 220 Query: 160 SVEGLFDVIVSN 171 + DV+V+N Sbjct: 221 DLSA--DVVVAN 230 >gi|224223734|gb|ACN39749.1| SibZ [Streptosporangium sibiricum] Length = 336 Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust. Identities = 19/66 (28%), Positives = 35/66 (53%) Query: 94 EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153 E+R + +LD G G G + + + G+G+D S +A+ +A+ A +GV++R Sbjct: 151 ERRGIRTMLDAGCGAGQLLIDACRRDERLTGIGLDNSPEAIAVAEKLAREHGVADRIQFF 210 Query: 154 QSDWFS 159 +D F Sbjct: 211 VADAFE 216 >gi|19115526|ref|NP_594614.1| DUF890 family protein [Schizosaccharomyces pombe 972h-] gi|74626664|sp|O42662|MTT16_SCHPO RecName: Full=Putative methyltransferase-like protein C27D7.08c gi|4539588|emb|CAA15827.2| DUF890 family protein [Schizosaccharomyces pombe] Length = 385 Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust. Identities = 27/90 (30%), Positives = 42/90 (46%), Gaps = 8/90 (8%) Query: 95 KRDVVRILDLGTGTGAVCLALLKESPFFKG--VGVDISCKALEIAKSNAVTNGVSERFDT 152 ++D RI+ L GTGA C+ L + VG +I + E AKSN + N + + Sbjct: 71 QKDKKRIIGLDIGTGASCIYPLLGCRMYSYDFVGTEIDKFSFETAKSNILQNNMESQIKI 130 Query: 153 L----QSDWFSSVEGL--FDVIVSNPPYIE 176 + Q EG+ F ++ NPP+ E Sbjct: 131 VLRSKQDCLLPDTEGMEEFTFVMCNPPFYE 160 >gi|332983461|ref|YP_004464902.1| methyltransferase GidB [Mahella australiensis 50-1 BON] gi|332701139|gb|AEE98080.1| methyltransferase GidB [Mahella australiensis 50-1 BON] Length = 240 Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust. Identities = 32/95 (33%), Positives = 47/95 (49%), Gaps = 8/95 (8%) Query: 35 RFFLTNAIVR---SLKHESIHRILGWRDF---YNVRLTLSSDTFEPRPETELLVDSALAF 88 R FL N ++ SL E+I R + ++D +N + L+S T + + +DS L + Sbjct: 5 RAFLNNEALKCGISLDDEAIDRFMAYKDMLIEWNEHINLTSITDDMGIVIKHFIDSLLCY 64 Query: 89 SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 S I R RI+D+GTG G LAL P K Sbjct: 65 STGVI--RPDARIIDIGTGAGFPGLALKIAFPSLK 97 >gi|289449975|ref|YP_003474465.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Clostridiales genomosp. BVAB3 str. UPII9-5] gi|289184522|gb|ADC90947.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Clostridiales genomosp. BVAB3 str. UPII9-5] Length = 458 Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust. Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 11/80 (13%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE------RFDTLQ 154 ++D G G + L L + + F GV+I A+E+A+ NA NG+ + +T+ Sbjct: 314 VIDAYCGIGTISLYLARRAKFV--YGVEIVPAAIEMAERNAEVNGIHNASFVCGKAETVI 371 Query: 155 SDWFSSVEGLF-DVIVSNPP 173 W + EGL DV+V +PP Sbjct: 372 PQWVA--EGLAPDVVVVDPP 389 >gi|261212228|ref|ZP_05926514.1| predicted O-methyltransferase [Vibrio sp. RC341] gi|260838836|gb|EEX65487.1| predicted O-methyltransferase [Vibrio sp. RC341] Length = 239 Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust. Identities = 26/96 (27%), Positives = 42/96 (43%), Gaps = 11/96 (11%) Query: 85 ALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN 144 A AF++P ILD+G+GTG + + + P + +DI A + + N + Sbjct: 36 AWAFTIP------PRSILDIGSGTGLLSIMCAQRFPEAEITALDIELSAFQATEHNRKNS 89 Query: 145 GVSERFDTLQSD---WFSSVEGLFDVIVSNPPYIES 177 ++R D W + F I+ NPPY S Sbjct: 90 PWADRITCHHHDILHW--QPDRRFAAIICNPPYFNS 123 >gi|255028345|ref|ZP_05300296.1| hypothetical protein LmonL_02296 [Listeria monocytogenes LO28] Length = 383 Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust. Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 3/54 (5%) Query: 125 VGVDISCKALEIAKSNAVTNGVSE--RFDTLQSDWFSSVEGLFDVIVSNPPYIE 176 +G DI + +EIAK NAV G+ + F LQ F + E + V+V+NPPY E Sbjct: 256 IGGDIDARLIEIAKQNAVEAGLGDLITFRQLQVADFQT-EDEYGVVVANPPYGE 308 >gi|229077255|ref|ZP_04209949.1| Methyltransferase type 11 [Bacillus cereus Rock4-18] gi|228706086|gb|EEL58381.1| Methyltransferase type 11 [Bacillus cereus Rock4-18] Length = 175 Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust. Identities = 31/79 (39%), Positives = 42/79 (53%), Gaps = 10/79 (12%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKS----NAVTNGVSERFDTLQS 155 +ILD+GTG+G++ + L K P GVD E +KS NA GVS+R D L++ Sbjct: 8 KILDIGTGSGSLIIKLAKTFPKSFLTGVDYWGGNWEYSKSQCQQNAKIEGVSDRIDFLKA 67 Query: 156 DW----FSSVEGLFDVIVS 170 F+ E FD IVS Sbjct: 68 SAAELPFTDNE--FDTIVS 84 >gi|146305786|ref|YP_001186251.1| 16S rRNA m(2)G 1207 methyltransferase [Pseudomonas mendocina ymp] gi|145573987|gb|ABP83519.1| 16S rRNA m(2)G 1207 methyltransferase / 23S rRNA m(2)G-1835 methyltransferase [Pseudomonas mendocina ymp] Length = 377 Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust. Identities = 27/94 (28%), Positives = 46/94 (48%), Gaps = 4/94 (4%) Query: 90 LPRIEKR-DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148 LP + + D R+ DLG G G + +A SP + VD S A++ A+ N + E Sbjct: 226 LPHLPRHLDARRVADLGCGNGVLGIAYALGSPQAQLTLVDESYMAVQSARENWAA-ALGE 284 Query: 149 RFDTLQS--DWFSSVEGLFDVIVSNPPYIESVIV 180 R T+++ G D+++ NPP+ + +V Sbjct: 285 RPATIRAGDGLAEQPAGSLDLVLCNPPFHQQQVV 318 >gi|116491255|ref|YP_810799.1| N6-adenine-specific methylase [Oenococcus oeni PSU-1] gi|116091980|gb|ABJ57134.1| N6-adenine-specific methylase [Oenococcus oeni PSU-1] Length = 186 Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust. Identities = 27/112 (24%), Positives = 56/112 (50%), Gaps = 10/112 (8%) Query: 75 RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134 RP TE + ++ + P K +V LDL G+G++ + + + K VD + A+ Sbjct: 22 RPTTEKVKEALFSIIAP-YNKPGIV--LDLYAGSGSLGIEAVSRG-YRKAYLVDHARPAI 77 Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPPYIESVIV 180 E+ ++N + E F+ +++ +++ FD+++ +PPY + IV Sbjct: 78 EVIRNNVIATKSPENFEIIKAPASQAIKQFFDNQIRFDLVIFDPPYAKQHIV 129 >gi|261278877|pdb|3K0B|A Chain A, Crystal Structure Of A Predicted N6-Adenine-Specific Dna Methylase From Listeria Monocytogenes Str. 4b F2365 Length = 393 Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust. Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 3/54 (5%) Query: 125 VGVDISCKALEIAKSNAVTNGVSE--RFDTLQSDWFSSVEGLFDVIVSNPPYIE 176 +G DI + +EIAK NAV G+ + F LQ F + E + V+V+NPPY E Sbjct: 267 IGGDIDARLIEIAKQNAVEAGLGDLITFRQLQVADFQT-EDEYGVVVANPPYGE 319 >gi|148271616|ref|YP_001221177.1| putative SAM-dependent methyltransferase [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|147829546|emb|CAN00459.1| putative SAM-dependant methyltransferase [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 249 Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust. Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 5/73 (6%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD---W 157 +LDLG G G+ L L+ P VGVD S + + A G+++R + +++D W Sbjct: 39 VLDLGCGDGSWLLRALRRDPALIAVGVDHSDAGFDRVREQAEREGLADRLELVRADARSW 98 Query: 158 FSSVEGLFDVIVS 170 S+ FDV++S Sbjct: 99 SSNDR--FDVVLS 109 >gi|119473197|ref|ZP_01614894.1| methylation of 50S ribosomal subunit protein L11 (ribosomal protein L11 methyltransferase) [Alteromonadales bacterium TW-7] gi|119444561|gb|EAW25876.1| methylation of 50S ribosomal subunit protein L11 (ribosomal protein L11 methyltransferase) [Alteromonadales bacterium TW-7] Length = 293 Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust. Identities = 31/111 (27%), Positives = 57/111 (51%), Gaps = 16/111 (14%) Query: 74 PRPET-ELLVDSALAFS----------LPRIEKRDVV--RILDLGTGTGAVCLALLKESP 120 P P+ +L+D LAF L +E +D+ ++D G G+G + +A +K Sbjct: 122 PDPDAVNVLLDPGLAFGTGTHATTALCLKWLESQDLTGKTVVDFGCGSGILGIAAIKLGA 181 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSN 171 + +G+DI +ALE + NA NGV+++ + + + E D++V+N Sbjct: 182 E-RMIGIDIDPQALEASLDNANRNGVADKLEVYLPE--NQPEFTADIVVAN 229 >gi|253733802|ref|ZP_04867967.1| methyltransferase [Staphylococcus aureus subsp. aureus TCH130] gi|253728105|gb|EES96834.1| methyltransferase [Staphylococcus aureus subsp. aureus TCH130] Length = 245 Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust. Identities = 27/82 (32%), Positives = 40/82 (48%), Gaps = 3/82 (3%) Query: 90 LPRIEKRDVVRILDLGTGTGAVCLALLKE-SPFFKGVGVDISCKALEIAKSNAVTNGVSE 148 L R + +D +R+LD+G TG V + K + VGVD++ L+IA N N VS Sbjct: 14 LDRAQIKDGMRVLDIGCATGEVTQLIAKRVGANGEVVGVDVNESLLKIANENNQYNNVSY 73 Query: 149 RFDTLQSDWFSSVEGLFDVIVS 170 ++ + G FD IV Sbjct: 74 QYSDIYQ--LPETMGHFDAIVG 93 >gi|167625805|ref|YP_001676099.1| ribosomal protein L11 methyltransferase [Shewanella halifaxensis HAW-EB4] gi|189037703|sp|B0TJ37|PRMA_SHEHH RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11 Mtase gi|167355827|gb|ABZ78440.1| ribosomal protein L11 methyltransferase [Shewanella halifaxensis HAW-EB4] Length = 293 Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust. Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 4/72 (5%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD-TLQSDWFS 159 ++D G G+G + +A LK + G+DI +A+E +K+NA NGV ++ + L D Sbjct: 162 VIDFGCGSGILAVAALKLG-AERVTGIDIDYQAIEASKANAERNGVQDKLELYLPED--Q 218 Query: 160 SVEGLFDVIVSN 171 + L D++V+N Sbjct: 219 PADLLADILVAN 230 >gi|160914580|ref|ZP_02076795.1| hypothetical protein EUBDOL_00588 [Eubacterium dolichum DSM 3991] gi|158433738|gb|EDP12027.1| hypothetical protein EUBDOL_00588 [Eubacterium dolichum DSM 3991] Length = 198 Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust. Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 13/80 (16%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG------VSERFDTL 153 R+LDLG G G V + L K P +D++ +A+++AK N N VS ++ L Sbjct: 61 RVLDLGCGYGPVGVVLKKIYPTKAFEMIDVNPRAVQLAKENICRNQLEADVHVSNIYEDL 120 Query: 154 QSDWFSSVEGLFDVIVSNPP 173 + +S I++NPP Sbjct: 121 HQESYSD-------IITNPP 133 >gi|14521102|ref|NP_126577.1| menaquinone biosynthesis methlytransferase related [Pyrococcus abyssi GE5] gi|5458319|emb|CAB49808.1| SAM-dependent methyltransferase [Pyrococcus abyssi GE5] Length = 248 Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust. Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 2/59 (3%) Query: 92 RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150 R +R+V RILDL GTG L L K ++ +G+D+ + L++A+ + G+ F Sbjct: 36 REAEREVKRILDLACGTGTPTLELAKRG--YEVIGLDLHEEMLQVARRKSEKEGIKVEF 92 >gi|332290180|ref|YP_004421032.1| 16S ribosomal RNA m2G1207 methyltransferase [Gallibacterium anatis UMN179] gi|330433076|gb|AEC18135.1| 16S ribosomal RNA m2G1207 methyltransferase [Gallibacterium anatis UMN179] Length = 334 Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust. Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 2/75 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LD+G G G + L SP DI A+ +A + + + SD FS Sbjct: 196 KVLDVGCGAGVIGAYLKFHSPQIDLTMSDI--HAMALASATQTLQQNQLQGSVIASDVFS 253 Query: 160 SVEGLFDVIVSNPPY 174 + FD+I+SNPP+ Sbjct: 254 HINDKFDLIISNPPF 268 >gi|322372660|ref|ZP_08047196.1| type I restriction-modification system, M subunit [Streptococcus sp. C150] gi|321277702|gb|EFX54771.1| type I restriction-modification system, M subunit [Streptococcus sp. C150] Length = 534 Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust. Identities = 31/112 (27%), Positives = 54/112 (48%), Gaps = 13/112 (11%) Query: 72 FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV---GVD 128 + P+P +L+ + +AF L R +K+ I D G+G++ L + S + V G + Sbjct: 200 YTPQPVAKLM--TQIAF-LGREDKQGFT-IYDATMGSGSLLLNAKRYSRQPQTVVYFGQE 255 Query: 129 ISCKALEIAKSNAVTNGVS------ERFDTLQSDWFSSVEGLFDVIVSNPPY 174 ++ +A+ N + +GV DTL DW + FD ++ NPPY Sbjct: 256 LNTSTYNLARMNMILHGVPIENQFLHNADTLDEDWPTQEPTNFDGVLMNPPY 307 >gi|225628668|ref|ZP_03786702.1| methyltransferase [Brucella ceti str. Cudo] gi|237816713|ref|ZP_04595705.1| methyltransferase [Brucella abortus str. 2308 A] gi|260544387|ref|ZP_05820208.1| conserved hypothetical protein [Brucella abortus NCTC 8038] gi|260759651|ref|ZP_05871999.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292] gi|261216839|ref|ZP_05931120.1| conserved hypothetical protein [Brucella ceti M13/05/1] gi|261319067|ref|ZP_05958264.1| conserved hypothetical protein [Brucella pinnipedialis B2/94] gi|261319706|ref|ZP_05958903.1| conserved hypothetical protein [Brucella ceti M644/93/1] gi|261753205|ref|ZP_05996914.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686] gi|261756374|ref|ZP_06000083.1| conserved hypothetical protein [Brucella sp. F5/99] gi|294853221|ref|ZP_06793893.1| RsmD family RNA methyltransferase [Brucella sp. NVSL 07-0026] gi|297249904|ref|ZP_06933605.1| RsmD family RNA methyltransferase [Brucella abortus bv. 5 str. B3196] gi|225616514|gb|EEH13562.1| methyltransferase [Brucella ceti str. Cudo] gi|237787526|gb|EEP61742.1| methyltransferase [Brucella abortus str. 2308 A] gi|260097658|gb|EEW81532.1| conserved hypothetical protein [Brucella abortus NCTC 8038] gi|260669969|gb|EEX56909.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292] gi|260921928|gb|EEX88496.1| conserved hypothetical protein [Brucella ceti M13/05/1] gi|261292396|gb|EEX95892.1| conserved hypothetical protein [Brucella ceti M644/93/1] gi|261298290|gb|EEY01787.1| conserved hypothetical protein [Brucella pinnipedialis B2/94] gi|261736358|gb|EEY24354.1| conserved hypothetical protein [Brucella sp. F5/99] gi|261742958|gb|EEY30884.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686] gi|294818876|gb|EFG35876.1| RsmD family RNA methyltransferase [Brucella sp. NVSL 07-0026] gi|297173773|gb|EFH33137.1| RsmD family RNA methyltransferase [Brucella abortus bv. 5 str. B3196] Length = 196 Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust. Identities = 40/135 (29%), Positives = 63/135 (46%), Gaps = 14/135 (10%) Query: 48 HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDS---ALAFSLPRIEKRDVVRILDL 104 E+ RI+G + + R ++ T RP T+ +S LA S P +K + VR+LDL Sbjct: 6 REAAVRIVGGK--FRGRALVTPSTNAIRPTTDRTRESLFNILAHSFP--DKVEGVRVLDL 61 Query: 105 GTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-----RFDTLQSDWFS 159 GTGA+ L L + V+ S + I + N G+ R D Q Sbjct: 62 FAGTGALGLEALSRGARYATF-VEESAEGRGILRQNIEALGLQGHTKILRRDACQLGIVG 120 Query: 160 SVEGLFDVIVSNPPY 174 ++E FD++ ++PPY Sbjct: 121 TME-PFDLVFADPPY 134 >gi|261856467|ref|YP_003263750.1| biotin biosynthesis protein BioC [Halothiobacillus neapolitanus c2] gi|261836936|gb|ACX96703.1| biotin biosynthesis protein BioC [Halothiobacillus neapolitanus c2] Length = 266 Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust. Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 8/86 (9%) Query: 88 FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147 F L +IE R RILDLG GTG + A+ K P + V +D++ + L + T + Sbjct: 36 FELLKIEPR---RILDLGAGTGQMTRAMQKRYPSAQVVALDLAEQMLAVIPK---TGRIF 89 Query: 148 ERFDTLQSDW--FSSVEGLFDVIVSN 171 +R + +D G FDV++SN Sbjct: 90 KRRRVVCADMHQLPFKAGSFDVVISN 115 >gi|300744004|ref|ZP_07073024.1| putative methyltransferase small domain protein [Rothia dentocariosa M567] gi|300380365|gb|EFJ76928.1| putative methyltransferase small domain protein [Rothia dentocariosa M567] Length = 209 Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust. Identities = 28/112 (25%), Positives = 53/112 (47%), Gaps = 7/112 (6%) Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 V +T ++ F P +D A L ++ + +LD+G G G + L+L +P Sbjct: 28 QVSVTTANGIFSPSG-----IDKGTAVLLEQVPEPHGKYMLDIGCGWGPITLSLAMLAPQ 82 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173 + G+D++ ++L + + NA G+ + + ++ FD I SNPP Sbjct: 83 SEVYGIDVNSRSLSLTEQNARALGMHNVSVSTPDEIDPTLR--FDTIWSNPP 132 >gi|261215708|ref|ZP_05929989.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya] gi|260917315|gb|EEX84176.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya] Length = 196 Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust. Identities = 40/135 (29%), Positives = 63/135 (46%), Gaps = 14/135 (10%) Query: 48 HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDS---ALAFSLPRIEKRDVVRILDL 104 E+ RI+G + + R ++ T RP T+ +S LA S P +K + VR+LDL Sbjct: 6 REAAVRIVGGK--FRGRALVTPSTNAIRPTTDRTRESLFNILAHSFP--DKVEGVRVLDL 61 Query: 105 GTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-----RFDTLQSDWFS 159 GTGA+ L L + V+ S + I + N G+ R D Q Sbjct: 62 FAGTGALGLEALSRGARYATF-VEESAEGRGILRQNIEALGLQGHTKILRRDACQLGIVG 120 Query: 160 SVEGLFDVIVSNPPY 174 ++E FD++ ++PPY Sbjct: 121 TME-PFDLVFADPPY 134 >gi|257467012|ref|ZP_05631323.1| ribosomal protein L11 methyltransferase [Fusobacterium gonidiaformans ATCC 25563] Length = 309 Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust. Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 3/73 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSDWFS 159 +LD+GTG+G + + K F GVDI A+E+A N N VS E++ L + Sbjct: 175 VLDVGTGSGILMIVAEKLGAGFV-CGVDIDELAVEVANENLELNKVSKEKYKVLHGNLIE 233 Query: 160 SVEGL-FDVIVSN 171 +E +DV+V+N Sbjct: 234 KIEKQSYDVVVAN 246 >gi|257451704|ref|ZP_05617003.1| ribosomal protein L11 methyltransferase [Fusobacterium sp. 3_1_5R] Length = 309 Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust. Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 3/73 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSDWFS 159 +LD+GTG+G + + K F GVDI A+E+A N N VS E++ L + Sbjct: 175 VLDVGTGSGILMIVAEKLGAGFV-CGVDIDELAVEVANENLELNKVSKEKYKVLHGNLIE 233 Query: 160 SVEGL-FDVIVSN 171 +E +DV+V+N Sbjct: 234 KIEKQSYDVVVAN 246 >gi|254671001|emb|CBA07760.1| ribosomal protein L11 methyltransferase [Neisseria meningitidis alpha153] Length = 330 Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust. Identities = 28/74 (37%), Positives = 38/74 (51%), Gaps = 11/74 (14%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDW 157 +LD G G+G + +A LK VGVDI +A+ K NA N V +F D L Sbjct: 202 VLDYGCGSGILTIAALKLG-AGSAVGVDIDEQAVRAGKDNAEQNNVDAQFFLPDGLP--- 257 Query: 158 FSSVEGLFDVIVSN 171 +G FDV+V+N Sbjct: 258 ----QGQFDVVVAN 267 >gi|241896131|ref|ZP_04783427.1| site-specific DNA-methyltransferase [Weissella paramesenteroides ATCC 33313] gi|241870645|gb|EER74396.1| site-specific DNA-methyltransferase [Weissella paramesenteroides ATCC 33313] Length = 388 Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust. Identities = 23/55 (41%), Positives = 30/55 (54%), Gaps = 5/55 (9%) Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQ---SDWFSSVEGLFDVIVSNPPYIE 176 G DI +EIAK+NA GV E Q +DW S + + V+V+NPPY E Sbjct: 267 TGYDIDENMIEIAKANAEAAGVGEDITFKQLAAADW--STDKINGVLVANPPYGE 319 >gi|303290222|ref|XP_003064398.1| predicted protein [Micromonas pusilla CCMP1545] gi|226453996|gb|EEH51303.1| predicted protein [Micromonas pusilla CCMP1545] Length = 384 Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust. Identities = 21/58 (36%), Positives = 34/58 (58%), Gaps = 8/58 (13%) Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--------GLFDVIVSNPPYI 175 GVD S AL++A NA NGV++R +++D F ++ G +D+IV +PP + Sbjct: 233 GVDSSRPALDVAAKNASLNGVTDRIRWVKNDAFKHLDACLENGEAGTYDLIVLDPPKL 290 >gi|20094146|ref|NP_613993.1| 16S rRNA G1207 methylase [Methanopyrus kandleri AV19] gi|19887153|gb|AAM01923.1| 16S rRNA G1207 methylase [Methanopyrus kandleri AV19] Length = 199 Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust. Identities = 31/104 (29%), Positives = 49/104 (47%), Gaps = 9/104 (8%) Query: 76 PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135 P T+LL ++ ++ V +LDLG G G + + KE V D++ +A+ Sbjct: 44 PGTQLLAEN--------MDLEGVHSVLDLGCGYGVLGIVAAKELGEGHVVMTDVNRRAIW 95 Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESV 178 +A N N V + + + + VE FD IVSNPP E + Sbjct: 96 LANENRRLNDVEDITEVREGSLYDPVEDEEFDRIVSNPPIREGL 139 >gi|169762756|ref|XP_001727278.1| UMTA methyltransferase family protein [Aspergillus oryzae RIB40] gi|83770306|dbj|BAE60439.1| unnamed protein product [Aspergillus oryzae] Length = 342 Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust. Identities = 42/161 (26%), Positives = 68/161 (42%), Gaps = 18/161 (11%) Query: 14 VTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFE 73 V S + D S++D F ++ VR ++E+ R +R N + + +D E Sbjct: 11 VVDTSDEDSLCDAQSIIDSN---FSLHSTVRDYEYENGRRYHAYR---NGQYPMPNDEEE 64 Query: 74 P------RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 +LL+ AL + P + + RILD+GTGTG + + ++ P + VG Sbjct: 65 QDRLAFMHHLFKLLLGGAL-YRAPIEQAQTPQRILDVGTGTGIWAIDIAEDFPGAEIVGT 123 Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVI 168 D+S A N D +S+W S FD I Sbjct: 124 DLSPIQPNWAPPNCTF-----LVDDAESEWAFSPSEAFDYI 159 >gi|16331775|ref|NP_442503.1| hypothetical protein sll0487 [Synechocystis sp. PCC 6803] gi|1001736|dbj|BAA10573.1| sll0487 [Synechocystis sp. PCC 6803] Length = 402 Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust. Identities = 31/90 (34%), Positives = 42/90 (46%), Gaps = 3/90 (3%) Query: 84 SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143 +A F L R VRILD G GTG L+ +P + VDIS AL +A++ Sbjct: 41 AAHNFCLGRRPANQKVRILDAGCGTGVGTEYLVHLNPEAEVHAVDISEGALAVAQTRLQK 100 Query: 144 NGV---SERFDTLQSDWFSSVEGLFDVIVS 170 +GV F L + + + G FD I S Sbjct: 101 SGVVCDRVHFHHLSLENLAHLPGQFDYINS 130 >gi|306843587|ref|ZP_07476188.1| methyltransferase small [Brucella sp. BO1] gi|306276278|gb|EFM57978.1| methyltransferase small [Brucella sp. BO1] Length = 340 Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust. Identities = 30/114 (26%), Positives = 49/114 (42%), Gaps = 8/114 (7%) Query: 73 EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV-DISC 131 EP + +D A +EK + DLG G G + LK + K + + + Sbjct: 172 EPGMFSHGAIDKGSALLARHMEKIVFGNVADLGAGWGYLAAQCLKYADRIKNIDLYEADY 231 Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWF----SSVEGLFDVIVSNPPYIESVIVD 181 +ALE A N G S + +WF + G++D ++ NPP+ E + D Sbjct: 232 EALEAAHGNLERLGAS---IPISFNWFDVTSEKIAGIYDTVIMNPPFHEGRVTD 282 >gi|251779390|ref|ZP_04822310.1| SAM-dependent methyltransferase [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243083705|gb|EES49595.1| SAM-dependent methyltransferase [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 250 Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust. Identities = 22/80 (27%), Positives = 42/80 (52%), Gaps = 6/80 (7%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R++DL TGTG + L + + G++I + + +A+ + N + ++ ++ D Sbjct: 52 RVIDLCTGTGIIPFLLYGKYSPREIYGLEIQEEMVNMAEKSVKLNALEDKITFMKED-LK 110 Query: 160 SVEGL-----FDVIVSNPPY 174 ++E L FDV+ NPPY Sbjct: 111 NIEYLKKMDKFDVVTVNPPY 130 >gi|149911097|ref|ZP_01899724.1| Putative ribosomal RNA small subunit methyltransferase D (rRNA(guanine-N(2)-)-methyltransferase) (16S rRNA m2G966 [Moritella sp. PE36] gi|149805847|gb|EDM65836.1| Putative ribosomal RNA small subunit methyltransferase D (rRNA(guanine-N(2)-)-methyltransferase) (16S rRNA m2G966 [Moritella sp. PE36] Length = 375 Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust. Identities = 28/104 (26%), Positives = 47/104 (45%), Gaps = 4/104 (3%) Query: 88 FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147 F + + K + I+DLG G G + + + +P K VD S A+ AK NA N S Sbjct: 221 FFMQYLPKGEYQHIIDLGCGNGVIGITAARLNPQAKITFVDESFMAIASAKENAAANIAS 280 Query: 148 ERFDT---LQSDWFSSVEGLFDVIVSNPPY-IESVIVDCLGLEV 187 D + + + D+++ NPP+ E I D + ++ Sbjct: 281 HEQDVEFLVNNCLYDYEPHSVDLVLCNPPFHQEKAITDHIAWQM 324 >gi|325135641|gb|EGC58258.1| ribosomal protein L11 methyltransferase [Neisseria meningitidis M0579] Length = 330 Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust. Identities = 28/74 (37%), Positives = 38/74 (51%), Gaps = 11/74 (14%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDW 157 +LD G G+G + +A LK VGVDI +A+ K NA N V +F D L Sbjct: 202 VLDYGCGSGILTIAALKLG-AGSAVGVDIDEQAVRAGKDNAEQNNVDAQFFLPDGLP--- 257 Query: 158 FSSVEGLFDVIVSN 171 +G FDV+V+N Sbjct: 258 ----QGQFDVVVAN 267 >gi|255326353|ref|ZP_05367437.1| methyltransferase small [Rothia mucilaginosa ATCC 25296] gi|255296570|gb|EET75903.1| methyltransferase small [Rothia mucilaginosa ATCC 25296] Length = 207 Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust. Identities = 29/99 (29%), Positives = 42/99 (42%), Gaps = 16/99 (16%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 +D A L R+LD+G G G + L L +P + VD++ +++ + + NA Sbjct: 43 IDKGTAILLQEAPDPQGERMLDIGCGWGPITLTLAMLAPDAQVHAVDVNSRSISLTERNA 102 Query: 142 -------VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173 VT G E D E FD I SNPP Sbjct: 103 AALGLPNVTVGTPESVDP---------ELRFDTIWSNPP 132 >gi|255656537|ref|ZP_05401946.1| hypothetical protein CdifQCD-2_12754 [Clostridium difficile QCD-23m63] gi|296450012|ref|ZP_06891776.1| RsmD family RNA methyltransferase [Clostridium difficile NAP08] gi|296878393|ref|ZP_06902401.1| RsmD family RNA methyltransferase [Clostridium difficile NAP07] gi|296261282|gb|EFH08113.1| RsmD family RNA methyltransferase [Clostridium difficile NAP08] gi|296430691|gb|EFH16530.1| RsmD family RNA methyltransferase [Clostridium difficile NAP07] Length = 184 Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust. Identities = 27/93 (29%), Positives = 50/93 (53%), Gaps = 13/93 (13%) Query: 100 RILDLGTGTGAV---CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 +LDL GTG++ CL+ ++ F VDIS ++++I KSN V L D Sbjct: 44 EVLDLFAGTGSLGIECLSRGAKACTF----VDISKESIDIVKSNIKKARVESESIILNLD 99 Query: 157 WFSSVEGL------FDVIVSNPPYIESVIVDCL 183 + ++++ L FD+I +PPY +++ ++ + Sbjct: 100 FKTAIDKLKLQNSKFDIIFMDPPYYKNMFIEAI 132 >gi|224539551|ref|ZP_03680090.1| hypothetical protein BACCELL_04456 [Bacteroides cellulosilyticus DSM 14838] gi|224518832|gb|EEF87937.1| hypothetical protein BACCELL_04456 [Bacteroides cellulosilyticus DSM 14838] Length = 476 Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust. Identities = 32/116 (27%), Positives = 59/116 (50%), Gaps = 19/116 (16%) Query: 72 FEPRPETELLVDSALAFSLPRIEK-------RDVVRILDLGTGTGAVCLALLKESPFFKG 124 F+ P++ +S A++L +I + +++V DL TGTG + + K++ + Sbjct: 296 FKIGPKSFYQTNSEQAYNLYKIARNFAGLTGKELV--YDLYTGTGTIANFVSKQAR--QV 351 Query: 125 VGVDISCKALEIAKSNAVTNGVSERF-------DTLQSDWFSSVEGLFDVIVSNPP 173 +G++ +A+E AK NA NG+ D L D+ + G DVI+++PP Sbjct: 352 IGIEYVPEAIEDAKVNAEINGIKNTLFFAGDMKDMLTQDFINQY-GRPDVIITDPP 406 >gi|298242107|ref|ZP_06965914.1| Methyltransferase type 12 [Ktedonobacter racemifer DSM 44963] gi|297555161|gb|EFH89025.1| Methyltransferase type 12 [Ktedonobacter racemifer DSM 44963] Length = 475 Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust. Identities = 20/56 (35%), Positives = 30/56 (53%) Query: 83 DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAK 138 D L + I + R+LDLG G G + LL E F +G+D+S ++L IA+ Sbjct: 276 DQRLQAAFETIRQSGAKRVLDLGCGEGKLLRMLLTEKSFEHILGLDVSYRSLAIAR 331 >gi|87125410|ref|ZP_01081256.1| hypothetical protein RS9917_08330 [Synechococcus sp. RS9917] gi|86167179|gb|EAQ68440.1| hypothetical protein RS9917_08330 [Synechococcus sp. RS9917] Length = 407 Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust. Identities = 28/76 (36%), Positives = 38/76 (50%), Gaps = 4/76 (5%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 +R+LD G GTG L +P + VDIS ALE+A+ +G ER L+ + Sbjct: 63 LRLLDAGCGTGVSTDYLCHLNPGADVLAVDISAGALEVARERLRRSGGGERVVALRQEQR 122 Query: 159 S----SVEGLFDVIVS 170 S + EG FD I S Sbjct: 123 SLLDLAGEGPFDYINS 138 >gi|308487672|ref|XP_003106031.1| hypothetical protein CRE_20319 [Caenorhabditis remanei] gi|308254605|gb|EFO98557.1| hypothetical protein CRE_20319 [Caenorhabditis remanei] Length = 224 Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust. Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 4/82 (4%) Query: 97 DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 D V+++D+G G G + +G+D+ AL++ N V ER + LQ+D Sbjct: 47 DGVKLVDVGCGCGMLMTTAATLYEPESVLGIDLDEDALKVCARNIEFADVQERCEVLQAD 106 Query: 157 WFSS----VEGLFDVIVSNPPY 174 S G FDV + NPP+ Sbjct: 107 VLDSETDLPRGTFDVAIINPPF 128 >gi|296168231|ref|ZP_06850204.1| thiopurine S-methyltransferase family protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295896803|gb|EFG76434.1| thiopurine S-methyltransferase family protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 246 Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust. Identities = 30/101 (29%), Positives = 43/101 (42%), Gaps = 12/101 (11%) Query: 74 PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133 P+P + LV A+ R E +LD GTG G + + + G+D S A Sbjct: 30 PQPAVQQLV----AYGGIRGE------VLDPGTGPGYHAIHFAAQG--YSATGIDDSPSA 77 Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174 +E AK NA GV F + +G FD +V + Y Sbjct: 78 IERAKRNAERAGVEVDFQVADATRLEGFDGRFDTVVDSAFY 118 >gi|291566902|dbj|BAI89174.1| hypothetical protein [Arthrospira platensis NIES-39] Length = 442 Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust. Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 1/69 (1%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV-SERFDTLQSDWFS 159 ILD G G+G LAL +P K VG+DIS K++E +++ +G+ + F + + Sbjct: 62 ILDAGCGSGYKALALALANPGAKIVGIDISEKSVEASRNRLKYHGIENAEFHAMYIEELP 121 Query: 160 SVEGLFDVI 168 S+ FD I Sbjct: 122 SLGWEFDYI 130 >gi|302508441|ref|XP_003016181.1| S-adenosylmethionine-dependent methyltransferase, putative [Arthroderma benhamiae CBS 112371] gi|291179750|gb|EFE35536.1| S-adenosylmethionine-dependent methyltransferase, putative [Arthroderma benhamiae CBS 112371] Length = 319 Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust. Identities = 23/43 (53%), Positives = 30/43 (69%), Gaps = 3/43 (6%) Query: 101 ILDLGTGTGAVCLALLKESPFFKG--VGVDISCKALEIAKSNA 141 ILDLGTG G++ L LL+E F G VGVD S K++E+A+ A Sbjct: 119 ILDLGTGNGSM-LTLLREEGGFSGPMVGVDYSVKSIELARQLA 160 >gi|229159971|ref|ZP_04287976.1| Methyltransferase type 11 [Bacillus cereus R309803] gi|228623494|gb|EEK80315.1| Methyltransferase type 11 [Bacillus cereus R309803] Length = 212 Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust. Identities = 30/79 (37%), Positives = 42/79 (53%), Gaps = 10/79 (12%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKS----NAVTNGVSERFDTLQS 155 +ILD+GTG+G++ + L K P G+D E +KS NA GVS R D L++ Sbjct: 45 KILDIGTGSGSLIIKLAKTFPKSFLTGIDYWGGNWEYSKSKCQQNAEIEGVSNRIDFLKA 104 Query: 156 DW----FSSVEGLFDVIVS 170 F+ E FD+IVS Sbjct: 105 SAAELPFTDNE--FDIIVS 121 >gi|115524232|ref|YP_781143.1| precorrin-6y C5,15-methyltransferase, subunit CbiE [Rhodopseudomonas palustris BisA53] gi|115518179|gb|ABJ06163.1| precorrin-6Y C5,15-methyltransferase (decarboxylating) [Rhodopseudomonas palustris BisA53] Length = 407 Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust. Identities = 20/60 (33%), Positives = 32/60 (53%) Query: 87 AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146 A +L + R + D+G G+GA+ + L P + +G++ LE A+SNA T GV Sbjct: 246 AVTLSSLAPRGGELLWDIGAGSGAIGIEWLLADPHNRAIGIEARADRLETARSNASTLGV 305 >gi|85101730|ref|XP_961205.1| hypothetical protein NCU03816 [Neurospora crassa OR74A] gi|16944575|emb|CAC18256.2| conserved hypothetical protein [Neurospora crassa] gi|28922746|gb|EAA31969.1| predicted protein [Neurospora crassa OR74A] Length = 406 Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust. Identities = 48/211 (22%), Positives = 84/211 (39%), Gaps = 60/211 (28%) Query: 94 EKRDVVRILDLGTGTGAVCLALLKESPFFKG--------VGVDISCKALEIAKSNAVTNG 145 ++ + I+DL TGTG C+ LL S + VGVDIS KA+ +++ N N Sbjct: 122 DQHQPLNIIDLCTGTG--CIPLLLYSQLSRSLPLQSLNIVGVDISQKAINLSRQNLHHNL 179 Query: 146 VSERFDTLQS----------------DWFSSVE--------------------------- 162 + RF S D FS Sbjct: 180 HAHRFPRPSSPRDKSHPQRLLHFHKADIFSPTSLDPILSTPSSSSTSSSSSSSSSSSTGT 239 Query: 163 GLFDVIVSNPPYI-ESVIVDCLGLEVRDFDPRISLDGGIDGLS-HYRTIADGVSRHLNKD 220 G +D++ SNPPYI S VR+++P+++L ++ + H + D N+ Sbjct: 240 GEWDLLTSNPPYISPSGFALSTSRSVRNWEPKLALVPPVERVDLHQKHFYDHWYYPDNEI 299 Query: 221 GLCSVE-----IGYNQKVDVVRIFESRKLFL 246 L +VE + Y + +++ R + +++ + Sbjct: 300 LLQTVEYQEEDVFYARLLEIARTYRPKRVLM 330 >gi|325127520|gb|EGC50446.1| ribosomal protein L11 methyltransferase [Neisseria meningitidis N1568] Length = 295 Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust. Identities = 28/74 (37%), Positives = 38/74 (51%), Gaps = 11/74 (14%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDW 157 +LD G G+G + +A LK VGVDI +A+ K NA N V +F D L Sbjct: 167 VLDYGCGSGILTIAALKLGAG-SAVGVDIDEQAVRAGKDNAEQNNVDAQFFLPDGLP--- 222 Query: 158 FSSVEGLFDVIVSN 171 +G FDV+V+N Sbjct: 223 ----QGQFDVVVAN 232 >gi|317139489|ref|XP_003189172.1| UMTA methyltransferase family protein [Aspergillus oryzae RIB40] Length = 258 Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust. Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 5/66 (7%) Query: 95 KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154 K DV R+LDLGTGTG + E P + +G D+S + V S D + Sbjct: 22 KNDVQRVLDLGTGTGIWAIDFADEHPSAQVIGTDLSP-----IQPRWVPPTCSFEIDDFE 76 Query: 155 SDWFSS 160 DW + Sbjct: 77 CDWLYT 82 >gi|307704233|ref|ZP_07641155.1| RNA methylase family UPF0020 family protein [Streptococcus mitis SK597] gi|307622213|gb|EFO01228.1| RNA methylase family UPF0020 family protein [Streptococcus mitis SK597] Length = 385 Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust. Identities = 25/59 (42%), Positives = 33/59 (55%), Gaps = 13/59 (22%) Query: 125 VGVDISCKALEIAKSNAVTNGVSE-------RFDTLQSDWFSSVEGLFDVIVSNPPYIE 176 +G DI + +EIAK+NA GV+E R L+SD + G VI+SNPPY E Sbjct: 260 MGCDIDARMVEIAKANAQAAGVAEDITFKQMRVQDLRSD---KING---VIISNPPYGE 312 >gi|324992013|gb|EGC23935.1| type I restriction-modification system DNA-methyltransferase [Streptococcus sanguinis SK405] Length = 533 Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust. Identities = 32/112 (28%), Positives = 53/112 (47%), Gaps = 13/112 (11%) Query: 72 FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV---GVD 128 + P+P +L+ + +AF L R E + I D G+G++ L K S + V G + Sbjct: 199 YTPQPVAKLM--TQIAF-LGR-EDQQGFTIYDATMGSGSLLLNAKKFSHQPQTVQYFGQE 254 Query: 129 ISCKALEIAKSNAVTNGVS------ERFDTLQSDWFSSVEGLFDVIVSNPPY 174 ++ +A+ N + +GV DTL DW + FD ++ NPPY Sbjct: 255 LNTSTYNLARMNMILHGVPVENQFLHNADTLDEDWPTQEPTNFDGVLMNPPY 306 >gi|254520681|ref|ZP_05132737.1| type I restriction-modification system [Clostridium sp. 7_2_43FAA] gi|226914430|gb|EEH99631.1| type I restriction-modification system [Clostridium sp. 7_2_43FAA] Length = 518 Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust. Identities = 24/88 (27%), Positives = 46/88 (52%), Gaps = 8/88 (9%) Query: 93 IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS----- 147 ++K+D+ + D G+G++ L + KE+ G + +A+ N + +GVS Sbjct: 223 MDKKDLKNVYDPTCGSGSLLLRVSKEANVRTFYGQEKVSTTYNLARMNMILHGVSYKDFN 282 Query: 148 -ERFDTLQSDWFSSVEGLFDVIVSNPPY 174 + DTL++ ++ F+ IV+NPPY Sbjct: 283 IKNDDTLENPQHKDMK--FEAIVANPPY 308 >gi|212223247|ref|YP_002306483.1| ribosomal RNA small subunit methyltransferase C [Thermococcus onnurineus NA1] gi|212008204|gb|ACJ15586.1| ribosomal RNA small subunit methyltransferase C [Thermococcus onnurineus NA1] Length = 209 Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust. Identities = 41/163 (25%), Positives = 64/163 (39%), Gaps = 35/163 (21%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+LDLG G GA+ + + + V D++ +A+ IA+ N N V + + Sbjct: 73 RVLDLGCGYGAIGIVASRFVEYV--VMTDVNRRAVSIARKNLKINNVRNA-EVRWGSLYE 129 Query: 160 SVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 V G FD I++NPP + G + L R I RHLN Sbjct: 130 PVRGEKFDTIITNPP----------------------VHAGKEIL---REIVINAPRHLN 164 Query: 219 KDGLCSVEIGYNQKVDVVR------IFESRKLFLVNAFKDYGG 255 GL + I Q ++ E R+L + ++ Y G Sbjct: 165 DGGLLQLVIKTKQGAKYIKGLMEEHFTEVRELAKGSGYRVYAG 207 >gi|121700134|ref|XP_001268332.1| conserved hypothetical protein [Aspergillus clavatus NRRL 1] gi|119396474|gb|EAW06906.1| conserved hypothetical protein [Aspergillus clavatus NRRL 1] Length = 241 Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust. Identities = 37/130 (28%), Positives = 57/130 (43%), Gaps = 29/130 (22%) Query: 99 VRILDLGTGTGAVCLALLKESPFF-KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 +++L+ GTGAV AL +PF K VG+D+S + ++ SNA G + + D Sbjct: 56 IKVLEYACGTGAVSSAL---APFVDKVVGIDVSEEMIKQYNSNAKETGFAGKMAGYVGDL 112 Query: 158 FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFD-PRISLDGGIDGLSHYRTIADGVSR- 215 F+ ESV + G E +DFD +S+ L H+ + R Sbjct: 113 FA----------------ESVPAEISGPEFQDFDLVAVSM-----ALHHFDKPEFALKRL 151 Query: 216 --HLNKDGLC 223 L K G+C Sbjct: 152 GERLKKGGMC 161 >gi|27379183|ref|NP_770712.1| replicative DNA helicase [Bradyrhizobium japonicum USDA 110] gi|27352334|dbj|BAC49337.1| replicative DNA helicase [Bradyrhizobium japonicum USDA 110] Length = 418 Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust. Identities = 23/71 (32%), Positives = 39/71 (54%), Gaps = 2/71 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+LD+G+G G + L L E+ G+ +S + L++A + A G++ L D + Sbjct: 176 RVLDIGSGWGGLGL-YLAETAGADVTGITLSSEQLQLANARAAEKGLTRSAKFLLQD-YR 233 Query: 160 SVEGLFDVIVS 170 ++G FD IVS Sbjct: 234 DIDGPFDRIVS 244 >gi|254226733|ref|ZP_04920309.1| conserved hypothetical protein [Vibrio cholerae V51] gi|125620750|gb|EAZ49108.1| conserved hypothetical protein [Vibrio cholerae V51] Length = 340 Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust. Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 2/75 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 +++D+G G G + + K +P + DIS A+ ++ V N + SD FS Sbjct: 203 KVIDIGCGAGVLGCVMAKLNPHIELEMTDISALAIRSSQETLVANQLHGH--VYPSDMFS 260 Query: 160 SVEGLFDVIVSNPPY 174 ++ IV+NPP+ Sbjct: 261 DTGHHYNYIVTNPPF 275 >gi|329849998|ref|ZP_08264844.1| methyltransferase domain protein [Asticcacaulis biprosthecum C19] gi|328841909|gb|EGF91479.1| methyltransferase domain protein [Asticcacaulis biprosthecum C19] Length = 463 Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust. Identities = 20/54 (37%), Positives = 33/54 (61%) Query: 86 LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKS 139 L + L ++ R+V ++D+G G G + L K+ F K G D+S +ALEIA++ Sbjct: 271 LDWVLATLKAREVKTVVDMGCGEGRLVGMLSKDLAFEKITGCDVSLRALEIARA 324 >gi|325000046|ref|ZP_08121158.1| O-methyltransferase [Pseudonocardia sp. P1] Length = 334 Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust. Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 1/87 (1%) Query: 81 LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140 LVD A A + + D ++DLG GTGA+ +L P +G+ +D+ A + A Sbjct: 150 LVDEAGAAFVDAYDVPDGSTVVDLGGGTGALLRHVLTARPSCRGMLLDLPDVA-QRAHDE 208 Query: 141 AVTNGVSERFDTLQSDWFSSVEGLFDV 167 G++ R D + D+F +V G DV Sbjct: 209 LTAAGLASRCDVMLGDFFEAVPGGADV 235 >gi|256391479|ref|YP_003113043.1| methyltransferase type 12 [Catenulispora acidiphila DSM 44928] gi|256357705|gb|ACU71202.1| Methyltransferase type 12 [Catenulispora acidiphila DSM 44928] Length = 248 Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust. Identities = 17/51 (33%), Positives = 29/51 (56%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151 + D G G + L +L +P +G GVD+S + LE ++NA G+ +R + Sbjct: 39 VADYACGWGELLLRVLALAPSARGFGVDMSARDLERGRANAAARGLGDRVE 89 >gi|229077311|ref|ZP_04209992.1| hypothetical protein bcere0023_360 [Bacillus cereus Rock4-2] gi|228706002|gb|EEL58309.1| hypothetical protein bcere0023_360 [Bacillus cereus Rock4-2] Length = 338 Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust. Identities = 27/83 (32%), Positives = 39/83 (46%), Gaps = 9/83 (10%) Query: 101 ILDLGTGTGAVCLALLKESPFFKG--VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 +LDL TG V L L S KG GV+I + ++ + NG+ ER + D Sbjct: 48 LLDLCTGNAVVPLLL---STRTKGNITGVEIQERLYDMGVRSVQYNGLEERIHLIHGDLK 104 Query: 159 SSVEGL----FDVIVSNPPYIES 177 E L +DV+ NPPY ++ Sbjct: 105 DMPEKLGRHQYDVVTCNPPYFQT 127 >gi|323697914|ref|ZP_08109826.1| ribosomal L11 methyltransferase [Desulfovibrio sp. ND132] gi|323457846|gb|EGB13711.1| ribosomal L11 methyltransferase [Desulfovibrio desulfuricans ND132] Length = 287 Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust. Identities = 33/129 (25%), Positives = 56/129 (43%), Gaps = 27/129 (20%) Query: 47 KHESIHRILGWRDFY-NVRLTLSSDTFEP-------RPETELLVDSALAF---------- 88 + ES + + W+DF+ V S + P T ++++ +AF Sbjct: 72 EQESENWAMAWKDFFVPVNCGESFRIYPPWLNDDEENGTTHIVIEPKMAFGTGHHATTSL 131 Query: 89 ---SLPRIEKRDVV----RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 ++ R+ K + LDLGTG+G + + L K G+G+DI +A+ A N Sbjct: 132 CLATIGRLAKAGTIAEGKTFLDLGTGSGILGIGLSKLG--LTGIGLDIDPQAVVCAVENV 189 Query: 142 VTNGVSERF 150 NGV+E Sbjct: 190 AANGVTESM 198 >gi|317128302|ref|YP_004094584.1| ribosomal protein L11 methyltransferase [Bacillus cellulosilyticus DSM 2522] gi|315473250|gb|ADU29853.1| ribosomal protein L11 methyltransferase [Bacillus cellulosilyticus DSM 2522] Length = 313 Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust. Identities = 34/137 (24%), Positives = 63/137 (45%), Gaps = 22/137 (16%) Query: 56 GWRDFY-------NVRLTLSSDTFEPRPETELLV--DSALAFS----------LPRIEKR 96 W+ +Y N+ +T + + +E E EL++ D +AF + +EK Sbjct: 113 AWKKYYKPVKVSENITITPTWEEYEKVHEKELIIELDPGMAFGTGTHPTTVLCIQALEKH 172 Query: 97 DVV--RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154 + ++D+GTG+G + +A K + +D+ A++ A N N V +R D Q Sbjct: 173 LKLGDTVVDVGTGSGVLSIAAAKLGAQHI-LALDLDDVAVKAANLNVKLNRVQDRIDVKQ 231 Query: 155 SDWFSSVEGLFDVIVSN 171 S+ VE +I++N Sbjct: 232 SNLLEKVESNPTLIIAN 248 >gi|222149109|ref|YP_002550066.1| ribosomal protein L11 methyltransferase [Agrobacterium vitis S4] gi|254782824|sp|B9JXT0|PRMA_AGRVS RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11 Mtase gi|221736094|gb|ACM37057.1| ribosomal protein L11 methyltransferase [Agrobacterium vitis S4] Length = 290 Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust. Identities = 30/97 (30%), Positives = 44/97 (45%), Gaps = 16/97 (16%) Query: 81 LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK--ESPFFKGVGVDISCKALEIAK 138 ++DS + PR LDLGTG+G + +A+ K P DI A+ +AK Sbjct: 142 MIDSVVRARRPR-------NALDLGTGSGVLAIAVRKLVNVPVL---ATDIDPIAVRVAK 191 Query: 139 SNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSN 171 N NGV + + F S G FD+I++N Sbjct: 192 ENGTRNGVPNGIEWRTAPGFHSTAFGEFGPFDLIIAN 228 >gi|217033265|ref|ZP_03438696.1| hypothetical protein HP9810_9g18 [Helicobacter pylori 98-10] gi|216944206|gb|EEC23631.1| hypothetical protein HP9810_9g18 [Helicobacter pylori 98-10] Length = 543 Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust. Identities = 28/90 (31%), Positives = 44/90 (48%), Gaps = 9/90 (10%) Query: 94 EKRDVVRILDLGTGTGAVCLALLKE--SPFFKGVGVDISCKALEIAKSNAVTNGVSERF- 150 E V+I D GTG + +AL + + DIS K+L++ K N + N ++ Sbjct: 226 EPTQSVKIYDPSAGTGTLLMALAHQIGTDSCTLYAQDISQKSLKMLKLNLILNDLTHSLK 285 Query: 151 -----DTLQSDWFS-SVEGLFDVIVSNPPY 174 +TL + + S +G D IVSNPP+ Sbjct: 286 YAIEGNTLTNSYHSKECKGKMDYIVSNPPF 315 >gi|78043572|ref|YP_360269.1| hypothetical protein CHY_1437 [Carboxydothermus hydrogenoformans Z-2901] gi|77995687|gb|ABB14586.1| conserved hypothetical protein [Carboxydothermus hydrogenoformans Z-2901] Length = 390 Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust. Identities = 35/133 (26%), Positives = 63/133 (47%), Gaps = 23/133 (17%) Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPPYIESV 178 +GVDIS +A+ A+ NAV NG ++ ++++ F + L FD+++ +PP Sbjct: 241 IGVDISSEAITRAQENAVLNGFQDKIFFIEANCFDYLRELEKNRANFDIVILDPPAFTKS 300 Query: 179 IVDCLGLEVRDFDP------RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV--EIGYN 230 + L +R + ++ +GGI + S HL +D +V E ++ Sbjct: 301 -KEALPGAIRGYKEINLRALKLLNEGGI-------LVTSSCSYHLTEDLFWNVISEAAFD 352 Query: 231 QKVDVVRIFESRK 243 K VRI E+R+ Sbjct: 353 AK-KRVRIIEARR 364 >gi|15640321|ref|NP_229948.1| ribosomal protein L11 methyltransferase [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121727069|ref|ZP_01680260.1| ribosomal protein L11 methyltransferase [Vibrio cholerae V52] gi|153801523|ref|ZP_01956109.1| ribosomal protein L11 methyltransferase [Vibrio cholerae MZO-3] gi|153822832|ref|ZP_01975499.1| ribosomal protein L11 methyltransferase [Vibrio cholerae B33] gi|153827379|ref|ZP_01980046.1| ribosomal protein L11 methyltransferase [Vibrio cholerae MZO-2] gi|229509282|ref|ZP_04398765.1| ribosomal protein L11 methyltransferase [Vibrio cholerae B33] gi|229512698|ref|ZP_04402166.1| ribosomal protein L11 methyltransferase [Vibrio cholerae TMA 21] gi|229516226|ref|ZP_04405674.1| ribosomal protein L11 methyltransferase [Vibrio cholerae RC9] gi|229527211|ref|ZP_04416604.1| ribosomal protein L11 methyltransferase [Vibrio cholerae 12129(1)] gi|229606422|ref|YP_002877070.1| ribosomal protein L11 methyltransferase [Vibrio cholerae MJ-1236] gi|254286234|ref|ZP_04961193.1| ribosomal protein L11 methyltransferase [Vibrio cholerae AM-19226] gi|254851429|ref|ZP_05240779.1| ribosomal protein L11 methyltransferase [Vibrio cholerae MO10] gi|255744094|ref|ZP_05418048.1| ribosomal protein L11 methyltransferase [Vibrio cholera CIRS 101] gi|258624523|ref|ZP_05719467.1| ribosomal protein L11 methyltransferase [Vibrio mimicus VM603] gi|262161984|ref|ZP_06031001.1| ribosomal protein L11 methyltransferase [Vibrio cholerae INDRE 91/1] gi|262172603|ref|ZP_06040281.1| ribosomal protein L11 methyltransferase [Vibrio mimicus MB-451] gi|38605494|sp|Q9KV64|PRMA_VIBCH RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11 Mtase gi|9654704|gb|AAF93467.1| ribosomal protein L11 methyltransferase [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121630580|gb|EAX62970.1| ribosomal protein L11 methyltransferase [Vibrio cholerae V52] gi|124122928|gb|EAY41671.1| ribosomal protein L11 methyltransferase [Vibrio cholerae MZO-3] gi|126519650|gb|EAZ76873.1| ribosomal protein L11 methyltransferase [Vibrio cholerae B33] gi|149738709|gb|EDM53051.1| ribosomal protein L11 methyltransferase [Vibrio cholerae MZO-2] gi|150423649|gb|EDN15591.1| ribosomal protein L11 methyltransferase [Vibrio cholerae AM-19226] gi|229335219|gb|EEO00703.1| ribosomal protein L11 methyltransferase [Vibrio cholerae 12129(1)] gi|229346652|gb|EEO11622.1| ribosomal protein L11 methyltransferase [Vibrio cholerae RC9] gi|229350208|gb|EEO15160.1| ribosomal protein L11 methyltransferase [Vibrio cholerae TMA 21] gi|229353597|gb|EEO18534.1| ribosomal protein L11 methyltransferase [Vibrio cholerae B33] gi|229369077|gb|ACQ59500.1| ribosomal protein L11 methyltransferase [Vibrio cholerae MJ-1236] gi|254847134|gb|EET25548.1| ribosomal protein L11 methyltransferase [Vibrio cholerae MO10] gi|255738359|gb|EET93750.1| ribosomal protein L11 methyltransferase [Vibrio cholera CIRS 101] gi|258583220|gb|EEW08025.1| ribosomal protein L11 methyltransferase [Vibrio mimicus VM603] gi|261893679|gb|EEY39665.1| ribosomal protein L11 methyltransferase [Vibrio mimicus MB-451] gi|262028362|gb|EEY47018.1| ribosomal protein L11 methyltransferase [Vibrio cholerae INDRE 91/1] gi|327483165|gb|AEA77572.1| Ribosomal protein L11 methyltransferase [Vibrio cholerae LMA3894-4] Length = 295 Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust. Identities = 27/73 (36%), Positives = 42/73 (57%), Gaps = 6/73 (8%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159 ++D G G+G + +A +K K +G+DI +AL +K NA NGV ++ + L D Sbjct: 163 VIDFGCGSGILAIAAIKLG-AAKVIGIDIDPQALLASKDNAARNGVEDQIEVYLPKD--- 218 Query: 160 SVEGLF-DVIVSN 171 EGL DV+V+N Sbjct: 219 QPEGLVADVVVAN 231 >gi|312880708|ref|ZP_07740508.1| Methyltransferase type 11 [Aminomonas paucivorans DSM 12260] gi|310783999|gb|EFQ24397.1| Methyltransferase type 11 [Aminomonas paucivorans DSM 12260] Length = 218 Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust. Identities = 35/121 (28%), Positives = 54/121 (44%), Gaps = 16/121 (13%) Query: 85 ALAFSL-PRIEKRDV--------VRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKAL 134 A AF + PR +R + ++ LDLG G G + AL SP + GVD+S L Sbjct: 25 ASAFGMGPRFYERALGGLVLAPGMKALDLGCGPGGLSFALGARSPVDTQIHGVDLSVDQL 84 Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSN------PPYIESVIVDCLGLEVR 188 ++A A S RF D +G FD+++++ PP + V + +R Sbjct: 85 DLASRRAGRVSCSLRFHRCSMDELPFPDGEFDLVMTSMALHETPPEVRRRTVGEVARVLR 144 Query: 189 D 189 D Sbjct: 145 D 145 >gi|294632596|ref|ZP_06711156.1| mucin-2 [Streptomyces sp. e14] gi|292835929|gb|EFF94278.1| mucin-2 [Streptomyces sp. e14] Length = 337 Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust. Identities = 17/59 (28%), Positives = 32/59 (54%) Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 D+G G + L++ P G+GVD++ +A ++A+ N G+ +R +Q+D V Sbjct: 156 DIGCGAATRLIHLVESRPGTTGIGVDVNAEACQLARQNVKRAGLDDRITIVQADMLDVV 214 >gi|229520987|ref|ZP_04410408.1| ribosomal protein L11 methyltransferase [Vibrio cholerae TM 11079-80] gi|229341872|gb|EEO06873.1| ribosomal protein L11 methyltransferase [Vibrio cholerae TM 11079-80] Length = 295 Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust. Identities = 27/73 (36%), Positives = 42/73 (57%), Gaps = 6/73 (8%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159 ++D G G+G + +A +K K +G+DI +AL +K NA NGV ++ + L D Sbjct: 163 VIDFGCGSGILAIAAIKLG-AAKVIGIDIDPQALLASKDNAARNGVEDQIEVYLPKD--- 218 Query: 160 SVEGLF-DVIVSN 171 EGL DV+V+N Sbjct: 219 QPEGLVADVVVAN 231 >gi|238482815|ref|XP_002372646.1| UMTA methyltransferase family protein [Aspergillus flavus NRRL3357] gi|220700696|gb|EED57034.1| UMTA methyltransferase family protein [Aspergillus flavus NRRL3357] Length = 296 Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust. Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 5/66 (7%) Query: 95 KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154 K DV R+LDLGTGTG + E P + +G D+S + V S D + Sbjct: 60 KNDVQRVLDLGTGTGIWAIDFADEHPSAQVIGTDLSP-----IQPRWVPPTCSFEIDDFE 114 Query: 155 SDWFSS 160 DW + Sbjct: 115 CDWLYT 120 >gi|119961880|ref|YP_947365.1| methyltransferase small subunit [Arthrobacter aurescens TC1] gi|119948739|gb|ABM07650.1| putative methyltransferase small domain protein [Arthrobacter aurescens TC1] Length = 204 Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust. Identities = 36/144 (25%), Positives = 60/144 (41%), Gaps = 4/144 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 +LD+G G G + L L +P VD++ + + + NA G++ +L + Sbjct: 62 HLLDIGCGWGPIALTLGLMAPHAHVHAVDVNERCIALTNENATALGLTNVAASLPHEVDP 121 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 +VE FD I SNPP + D L + + PR++ G + +D + R L Sbjct: 122 AVE--FDTIWSNPPI--RIGKDELHSLLLTWLPRLAPGGNAWLVVQKNLGSDSLQRWLAA 177 Query: 220 DGLCSVEIGYNQKVDVVRIFESRK 243 + S + RI RK Sbjct: 178 ELDSSYTVSRESTSKTFRIIRVRK 201 >gi|146302843|ref|YP_001190159.1| methyltransferase small [Metallosphaera sedula DSM 5348] gi|145701093|gb|ABP94235.1| 16S rRNA m(2)G 1207 methyltransferase [Metallosphaera sedula DSM 5348] Length = 186 Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust. Identities = 27/101 (26%), Positives = 46/101 (45%), Gaps = 2/101 (1%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 + D+G G G + + + +P +D++ A++ ++ N G+ +R L+SD S Sbjct: 50 VADVGCGYGPIGIYVAIINPRLSVYMLDVNPLAVKASRENVERYGLGDRVKVLKSDLLSG 109 Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201 E I SNPP + VD L RD R+ G + Sbjct: 110 FEFRVKAIYSNPPLSKG--VDVLERLARDAPERLEKGGWVQ 148 >gi|116253028|ref|YP_768866.1| ribosomal protein L11 methyltransferase [Rhizobium leguminosarum bv. viciae 3841] gi|166223435|sp|Q1ME53|PRMA_RHIL3 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11 Mtase gi|115257676|emb|CAK08774.1| putative ribosomal protein L11 methyltransferase [Rhizobium leguminosarum bv. viciae 3841] Length = 292 Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust. Identities = 27/85 (31%), Positives = 41/85 (48%), Gaps = 9/85 (10%) Query: 93 IEKRDVVRILDLGTGTGAVCLAL--LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150 + R V LDLGTG+G + +A+ L+ P DI A ++A N NG++ Sbjct: 147 VRSRPVRNALDLGTGSGVLAIAVRKLRNIPVL---ATDIDPIATKVAAENVRRNGIASGI 203 Query: 151 DTLQSDWFSSV----EGLFDVIVSN 171 T + F S G FD+I++N Sbjct: 204 VTRTAPGFHSTAFSEHGPFDLIIAN 228 >gi|14520742|ref|NP_126217.1| hypothetical protein PAB0359 [Pyrococcus abyssi GE5] gi|5457958|emb|CAB49448.1| Ribosomal RNA small subunit methyltransferase C (rRNA (guanine-n2-)-methyltransferase) (16S rRNA M2G1207 methyltransferase) [Pyrococcus abyssi GE5] Length = 195 Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust. Identities = 32/97 (32%), Positives = 50/97 (51%), Gaps = 12/97 (12%) Query: 78 TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137 TELL+++ I K D +ILDLG G G + + + + V DI+ +A++IA Sbjct: 45 TELLIENM-------ILKPDW-KILDLGCGYGVIGIVASRFVNYV--VMTDINKRAVQIA 94 Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPP 173 + N NGV + + + VEG F I++NPP Sbjct: 95 RKNIKINGVKNA-EVRLGNLYEPVEGEKFHSIITNPP 130 >gi|297581756|ref|ZP_06943678.1| ribosomal protein L11 methyltransferase [Vibrio cholerae RC385] gi|297534163|gb|EFH73002.1| ribosomal protein L11 methyltransferase [Vibrio cholerae RC385] Length = 295 Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust. Identities = 27/73 (36%), Positives = 42/73 (57%), Gaps = 6/73 (8%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159 ++D G G+G + +A +K K +G+DI +AL +K NA NGV ++ + L D Sbjct: 163 VIDFGCGSGILAIAAIKLG-AAKVIGIDIDPQALLASKDNAARNGVEDQIEVYLPKD--- 218 Query: 160 SVEGLF-DVIVSN 171 EGL DV+V+N Sbjct: 219 QPEGLVADVVVAN 231 >gi|330872375|gb|EGH06524.1| SAM-dependent methyltransferase [Pseudomonas syringae pv. glycinea str. race 4] Length = 366 Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust. Identities = 33/113 (29%), Positives = 54/113 (47%), Gaps = 30/113 (26%) Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPP-YIESVI 179 VD S AL+ + NA NG +E+ ++ D F +++ L FDVIV++PP +I+ Sbjct: 249 VDASSFALDGVERNAALNGFAEKMTCIEGDVFEALKELKAGEERFDVIVADPPAFIK--- 305 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL-----CSVEI 227 R D + +G YR + + R L+KDG+ CS+ + Sbjct: 306 --------RKKDMK-------NGEGAYRRLNEQAMRLLSKDGILVSASCSMHL 343 >gi|325273728|ref|ZP_08139928.1| SAM-dependent methyltransferase [Pseudomonas sp. TJI-51] gi|324101148|gb|EGB98794.1| SAM-dependent methyltransferase [Pseudomonas sp. TJI-51] Length = 398 Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust. Identities = 32/113 (28%), Positives = 54/113 (47%), Gaps = 30/113 (26%) Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPP-YIESVI 179 VD S AL+ + NA NG+ E+ ++ D F ++ L FDVI+++PP +I+ Sbjct: 249 VDASGFALDGVERNAALNGIGEKLTCIEGDVFEALRELKAAEERFDVIIADPPAFIK--- 305 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL-----CSVEI 227 R D + +G + YR + + R L+KDG+ CS+ + Sbjct: 306 --------RKKDLK-------NGEAAYRRLNEQAMRMLSKDGILVSASCSMHL 343 >gi|290967768|ref|ZP_06559321.1| methyltransferase small domain protein [Megasphaera genomosp. type_1 str. 28L] gi|290782127|gb|EFD94702.1| methyltransferase small domain protein [Megasphaera genomosp. type_1 str. 28L] Length = 252 Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust. Identities = 28/87 (32%), Positives = 39/87 (44%), Gaps = 17/87 (19%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGV----GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 +LDLGTGTGA+ L L +GV ++++ +IA N + N E D Sbjct: 46 VLDLGTGTGAIPLILTA-----RGVRAVTALELNPIMADIAARNVILNHKEESIRIKHGD 100 Query: 157 ------WFSSVEGLFDVIVSNPPYIES 177 W S G F + +NPPY E Sbjct: 101 YRQPGKWLKS--GSFAAVYANPPYREK 125 >gi|289624668|ref|ZP_06457622.1| SAM-dependent methyltransferase [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|330871120|gb|EGH05829.1| SAM-dependent methyltransferase [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 398 Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust. Identities = 33/113 (29%), Positives = 54/113 (47%), Gaps = 30/113 (26%) Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPP-YIESVI 179 VD S AL+ + NA NG +E+ ++ D F +++ L FDVIV++PP +I+ Sbjct: 249 VDASSFALDGVERNAALNGFAEKMTCIEGDVFEALKELKAGEERFDVIVADPPAFIK--- 305 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL-----CSVEI 227 R D + +G YR + + R L+KDG+ CS+ + Sbjct: 306 --------RKKDMK-------NGKGAYRRLNEQAMRLLSKDGILVSASCSMHL 343 >gi|227874251|ref|ZP_03992450.1| O-methyltransferase [Oribacterium sinus F0268] gi|227839920|gb|EEJ50351.1| O-methyltransferase [Oribacterium sinus F0268] Length = 245 Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust. Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 11/87 (12%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF- 158 R+ DL TG G V L L ++ G++I +A+E+A+ + N + R L+ D Sbjct: 42 RVFDLCTGNGIVPLLLAAKTEAESIYGIEIQREAVELARRSVALNEEA-RIHILEGDLCK 100 Query: 159 ---------SSVEGLFDVIVSNPPYIE 176 S+ F V+ +NPPY++ Sbjct: 101 IQEQRTAEGKSLASSFTVVTANPPYMQ 127 >gi|227501269|ref|ZP_03931318.1| site-specific DNA-methyltransferase (adenine-specific) [Anaerococcus tetradius ATCC 35098] gi|227216502|gb|EEI81908.1| site-specific DNA-methyltransferase (adenine-specific) [Anaerococcus tetradius ATCC 35098] Length = 376 Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust. Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 2/65 (3%) Query: 112 CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD--WFSSVEGLFDVIV 169 LA + S +G DIS +A+ +AK+NA+ GV E ++ D + + + V++ Sbjct: 241 ALARIDYSKKLHILGSDISGRAISLAKNNAINAGVGEDIAFVKRDVKSLALAKDDYGVLI 300 Query: 170 SNPPY 174 SNPPY Sbjct: 301 SNPPY 305 >gi|254168246|ref|ZP_04875092.1| Putative RNA methylase family UPF0020 [Aciduliprofundum boonei T469] gi|197622755|gb|EDY35324.1| Putative RNA methylase family UPF0020 [Aciduliprofundum boonei T469] Length = 310 Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust. Identities = 38/144 (26%), Positives = 66/144 (45%), Gaps = 27/144 (18%) Query: 42 IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAF---------SLPR 92 IVR +++H L DF + +FE R L + + +L R Sbjct: 114 IVRVYAGKNLHIGLELYDF-------AEQSFESRRAKNLPISYPITMHPRLARAMINLAR 166 Query: 93 IEKRDVVRILDLGTGTGAVCL--ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150 +++ + RILD GTG++ + A++ K G DI + L+ +++N T G+ Sbjct: 167 VKRGE--RILDPFCGTGSILIEGAIIG----MKMHGSDIDERMLKASQTNLKTFGLEA-- 218 Query: 151 DTLQSDWFSSVEGLFDVIVSNPPY 174 L+ +EG +D IV++PPY Sbjct: 219 -ILEKKDVGEIEGYYDAIVTDPPY 241 >gi|330505434|ref|YP_004382303.1| SAM-dependent methyltransferase [Pseudomonas mendocina NK-01] gi|328919720|gb|AEB60551.1| SAM-dependent methyltransferase [Pseudomonas mendocina NK-01] Length = 399 Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust. Identities = 42/142 (29%), Positives = 65/142 (45%), Gaps = 35/142 (24%) Query: 100 RILDLGT--GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 R+LDL + G V A S F VD S AL+ + NA NG +E+ ++ D Sbjct: 224 RVLDLFSYIGGWGVQAAAFGASEVF---CVDASGFALDGVERNANLNGFAEKVTCVEGDV 280 Query: 158 FS------SVEGLFDVIVSNPP-YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210 F+ S E FDV++++PP +I+ R D + +G + YR + Sbjct: 281 FAALRELKSAEERFDVVIADPPAFIK-----------RKKDIK-------NGEAAYRRLN 322 Query: 211 DGVSRHLNKDGL-----CSVEI 227 + R LNKDG+ CS+ + Sbjct: 323 ETAMRLLNKDGILVSASCSMHL 344 >gi|296139549|ref|YP_003646792.1| methyltransferase small [Tsukamurella paurometabola DSM 20162] gi|296027683|gb|ADG78453.1| methyltransferase small [Tsukamurella paurometabola DSM 20162] Length = 494 Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust. Identities = 28/76 (36%), Positives = 42/76 (55%), Gaps = 5/76 (6%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LDLGTG G + + + V DIS +A A ++A NGV D DWF+ Sbjct: 163 VLDLGTGCGVHACGAARFA--DRVVATDISDRAAGFAAASAALNGVE--VDVRTGDWFAP 218 Query: 161 VEG-LFDVIVSNPPYI 175 V G FD++++NPP++ Sbjct: 219 VAGERFDLLLANPPFV 234 >gi|189466070|ref|ZP_03014855.1| hypothetical protein BACINT_02440 [Bacteroides intestinalis DSM 17393] gi|189434334|gb|EDV03319.1| hypothetical protein BACINT_02440 [Bacteroides intestinalis DSM 17393] Length = 476 Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust. Identities = 32/116 (27%), Positives = 59/116 (50%), Gaps = 19/116 (16%) Query: 72 FEPRPETELLVDSALAFSLPRIEK-------RDVVRILDLGTGTGAVCLALLKESPFFKG 124 F+ P++ +S A++L +I + +++V DL TGTG + + K++ + Sbjct: 296 FKIGPKSFYQTNSEQAYNLYKIARNFAGLTGKELV--YDLYTGTGTIANFVSKQAR--QV 351 Query: 125 VGVDISCKALEIAKSNAVTNGVSERF-------DTLQSDWFSSVEGLFDVIVSNPP 173 +G++ +A+E AK NA NG+ D L D+ + G DVI+++PP Sbjct: 352 IGIEYVPEAIEDAKVNAEINGIENTLFFAGDMKDMLTQDFINQY-GRPDVIITDPP 406 >gi|121634223|ref|YP_974468.1| ribosomal protein L11 methyltransferase [Neisseria meningitidis FAM18] gi|166223424|sp|A1KS36|PRMA_NEIMF RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11 Mtase gi|120865929|emb|CAM09666.1| putative ribosomal protein L11 methyltransferase [Neisseria meningitidis FAM18] gi|261393202|emb|CAX50821.1| ribosomal protein L11 methyltransferase (L11 Mtase) [Neisseria meningitidis 8013] gi|325131505|gb|EGC54212.1| ribosomal protein L11 methyltransferase [Neisseria meningitidis M6190] gi|325137551|gb|EGC60133.1| ribosomal protein L11 methyltransferase [Neisseria meningitidis ES14902] gi|325141598|gb|EGC64063.1| ribosomal protein L11 methyltransferase [Neisseria meningitidis 961-5945] gi|325197639|gb|ADY93095.1| ribosomal protein L11 methyltransferase [Neisseria meningitidis G2136] Length = 295 Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust. Identities = 28/74 (37%), Positives = 38/74 (51%), Gaps = 11/74 (14%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDW 157 +LD G G+G + +A LK VGVDI +A+ K NA N V +F D L Sbjct: 167 VLDYGCGSGILTIAALKLGAG-SAVGVDIDEQAVRAGKDNAEQNNVDAQFFLPDGLP--- 222 Query: 158 FSSVEGLFDVIVSN 171 +G FDV+V+N Sbjct: 223 ----QGQFDVVVAN 232 >gi|126437784|ref|YP_001073475.1| putative methylase [Mycobacterium sp. JLS] gi|126237584|gb|ABO00985.1| putative methylase [Mycobacterium sp. JLS] Length = 231 Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust. Identities = 35/110 (31%), Positives = 53/110 (48%), Gaps = 19/110 (17%) Query: 72 FEPRPETELLVDSALAFSLPRIEKRDVV---RILDLGTGTG--AVCLALLKESPFFKGVG 126 + P+ +++LL+D +EK + R +DL TG+G AV AL S Sbjct: 19 YAPQEDSQLLIDI--------MEKTGLAVGRRAVDLCTGSGVVAVNAALQGASSV---TA 67 Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYI 175 DI +A+ A+ NA+ GV D W +VE FD++ NPPY+ Sbjct: 68 FDICPRAVRCARGNALGAGVD--VDVHLGSWARAVEFDPFDLVTCNPPYV 115 >gi|2865243|gb|AAC15897.1| type IC modification subunit [Lactococcus lactis] Length = 531 Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust. Identities = 26/90 (28%), Positives = 40/90 (44%), Gaps = 9/90 (10%) Query: 94 EKRDVVRILDLGTGTGAVCLAL---LKESPFFKGVGVDISCKALEIAKSNAVTNGV-SER 149 E R I D G+G++ L + L G +++ +A+ N + +G+ ER Sbjct: 213 ETRAPFHIYDPAMGSGSLMLNIRRYLNNPDQVHYHGQELNTTTFNLARMNLILHGIDKER 272 Query: 150 F-----DTLQSDWFSSVEGLFDVIVSNPPY 174 DTL +DW S FD + NPPY Sbjct: 273 MNLNNGDTLDADWPSEEPYQFDSVCMNPPY 302 >gi|330508056|ref|YP_004384484.1| phosphatidylethanolamine N-methyltransferase [Methanosaeta concilii GP-6] gi|328928864|gb|AEB68666.1| phosphatidylethanolamine N-methyltransferase, putative [Methanosaeta concilii GP-6] Length = 256 Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust. Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 2/80 (2%) Query: 91 PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150 P ++ R R+LD+GTG G + L L + GVDIS +E A+ NA + G+ F Sbjct: 39 PFLQGRRYKRVLDVGTGPGFMALILAEMG--LDVTGVDISSGMIEKARQNAQSMGLQVDF 96 Query: 151 DTLQSDWFSSVEGLFDVIVS 170 + S FD++V+ Sbjct: 97 RHADGEQLSFDSESFDLLVN 116 >gi|309776642|ref|ZP_07671618.1| methyltransferase [Erysipelotrichaceae bacterium 3_1_53] gi|308915602|gb|EFP61366.1| methyltransferase [Erysipelotrichaceae bacterium 3_1_53] Length = 400 Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust. Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 5/78 (6%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R++D + TG L + + V VD+S AL+ A NA N + R +++D F Sbjct: 230 RVMDCFSHTGGFALNAAYGNAQ-QVVAVDVSQTALDQAYENAKLNQLENRISFVKADVFK 288 Query: 160 SV----EGLFDVIVSNPP 173 + EG FD+I+ +PP Sbjct: 289 YLDACEEGQFDIIILDPP 306 >gi|288554640|ref|YP_003426575.1| hypothetical protein BpOF4_08125 [Bacillus pseudofirmus OF4] gi|288545800|gb|ADC49683.1| hypothetical protein BpOF4_08125 [Bacillus pseudofirmus OF4] Length = 246 Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust. Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 5/82 (6%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF-- 158 ILDL +G G + L L + GV+I + ++A+ N N ++++ +D Sbjct: 49 ILDLCSGNGVIPLVLSTRTKA-TITGVEIQERLWDMARRNEELNKLNQQLHFELADLNHL 107 Query: 159 --SSVEGLFDVIVSNPPYIESV 178 S +G FDV+ NPPY E+V Sbjct: 108 PPSIKKGSFDVVTCNPPYFETV 129 >gi|256544972|ref|ZP_05472341.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Anaerococcus vaginalis ATCC 51170] gi|256399339|gb|EEU12947.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Anaerococcus vaginalis ATCC 51170] Length = 455 Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust. Identities = 27/90 (30%), Positives = 46/90 (51%), Gaps = 8/90 (8%) Query: 87 AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146 A L ++K +LDL +GTG + K + K +G++I +A+E A NA N + Sbjct: 303 AIELANVDKNK--NVLDLYSGTGTITQLFAKSAN--KAMGIEIIEEAVEKAFDNAKENEI 358 Query: 147 SERFDTLQSDWFSS---VEGLFDVIVSNPP 173 E + + D V+G +D++V +PP Sbjct: 359 -ENINFIAGDVLEKIDLVKGKYDIVVIDPP 387 >gi|121586350|ref|ZP_01676139.1| ribosomal protein L11 methyltransferase [Vibrio cholerae 2740-80] gi|153820015|ref|ZP_01972682.1| ribosomal protein L11 methyltransferase [Vibrio cholerae NCTC 8457] gi|153831236|ref|ZP_01983903.1| ribosomal protein L11 methyltransferase [Vibrio cholerae 623-39] gi|227080507|ref|YP_002809058.1| ribosomal protein L11 methyltransferase [Vibrio cholerae M66-2] gi|229506909|ref|ZP_04396417.1| ribosomal protein L11 methyltransferase [Vibrio cholerae BX 330286] gi|261210421|ref|ZP_05924715.1| ribosomal protein L11 methyltransferase [Vibrio sp. RC341] gi|298500926|ref|ZP_07010728.1| LSU ribosomal protein L11 methyltransferase [Vibrio cholerae MAK 757] gi|254783322|sp|C3LQP9|PRMA_VIBCM RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11 Mtase gi|121549470|gb|EAX59498.1| ribosomal protein L11 methyltransferase [Vibrio cholerae 2740-80] gi|126509437|gb|EAZ72031.1| ribosomal protein L11 methyltransferase [Vibrio cholerae NCTC 8457] gi|148873279|gb|EDL71414.1| ribosomal protein L11 methyltransferase [Vibrio cholerae 623-39] gi|227008395|gb|ACP04607.1| ribosomal protein L11 methyltransferase [Vibrio cholerae M66-2] gi|229356014|gb|EEO20933.1| ribosomal protein L11 methyltransferase [Vibrio cholerae BX 330286] gi|260840479|gb|EEX67045.1| ribosomal protein L11 methyltransferase [Vibrio sp. RC341] gi|297540430|gb|EFH76489.1| LSU ribosomal protein L11 methyltransferase [Vibrio cholerae MAK 757] Length = 295 Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust. Identities = 27/73 (36%), Positives = 42/73 (57%), Gaps = 6/73 (8%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159 ++D G G+G + +A +K K +G+DI +AL +K NA NGV ++ + L D Sbjct: 163 VIDFGCGSGILAIAAIKLG-AAKVIGIDIDPQALLASKDNAARNGVEDQIEVYLPKD--- 218 Query: 160 SVEGLF-DVIVSN 171 EGL DV+V+N Sbjct: 219 QPEGLVADVVVAN 231 >gi|118478236|ref|YP_895387.1| methyltransferase [Bacillus thuringiensis str. Al Hakam] gi|196043411|ref|ZP_03110649.1| methyltransferase, UbiE/COQ5 family [Bacillus cereus 03BB108] gi|225864863|ref|YP_002750241.1| methyltransferase, UbiE/COQ5 family [Bacillus cereus 03BB102] gi|229185105|ref|ZP_04312293.1| Methyltransferase type 11 [Bacillus cereus BGSC 6E1] gi|118417461|gb|ABK85880.1| methyltransferase [Bacillus thuringiensis str. Al Hakam] gi|196025720|gb|EDX64389.1| methyltransferase, UbiE/COQ5 family [Bacillus cereus 03BB108] gi|225785811|gb|ACO26028.1| methyltransferase, UbiE/COQ5 family [Bacillus cereus 03BB102] gi|228598362|gb|EEK55994.1| Methyltransferase type 11 [Bacillus cereus BGSC 6E1] Length = 261 Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust. Identities = 23/61 (37%), Positives = 35/61 (57%), Gaps = 4/61 (6%) Query: 86 LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG-VGVDISCKALEIAKSNAVTN 144 L + + ++E R R+LD+ TG G V L +P FK V +D++ K LE AK ++N Sbjct: 30 LQYVVQQVESRHNNRLLDIATGGGHVANVL---APLFKEVVALDLTEKMLENAKDFIISN 86 Query: 145 G 145 G Sbjct: 87 G 87 >gi|147675659|ref|YP_001218565.1| ribosomal protein L11 methyltransferase [Vibrio cholerae O395] gi|262167984|ref|ZP_06035683.1| ribosomal protein L11 methyltransferase [Vibrio cholerae RC27] gi|172047477|sp|A5F3S3|PRMA_VIBC3 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11 Mtase gi|146317542|gb|ABQ22081.1| ribosomal protein L11 methyltransferase [Vibrio cholerae O395] gi|227012152|gb|ACP08362.1| ribosomal protein L11 methyltransferase [Vibrio cholerae O395] gi|262023517|gb|EEY42219.1| ribosomal protein L11 methyltransferase [Vibrio cholerae RC27] Length = 295 Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust. Identities = 27/73 (36%), Positives = 42/73 (57%), Gaps = 6/73 (8%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159 ++D G G+G + +A +K K +G+DI +AL +K NA NGV ++ + L D Sbjct: 163 VIDFGCGSGILAIAAIKLG-AAKVIGIDIDPQALLASKDNAARNGVEDQIEVYLPKD--- 218 Query: 160 SVEGLF-DVIVSN 171 EGL DV+V+N Sbjct: 219 QPEGLVADVVVAN 231 >gi|325129518|gb|EGC52345.1| ribosomal protein L11 methyltransferase [Neisseria meningitidis OX99.30304] Length = 295 Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust. Identities = 28/74 (37%), Positives = 38/74 (51%), Gaps = 11/74 (14%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDW 157 +LD G G+G + +A LK VGVDI +A+ K NA N V +F D L Sbjct: 167 VLDYGCGSGILTIAALKLGAG-SAVGVDIDEQAVRAGKDNAEQNNVDAQFFLPDGLP--- 222 Query: 158 FSSVEGLFDVIVSN 171 +G FDV+V+N Sbjct: 223 ----QGQFDVVVAN 232 >gi|265984949|ref|ZP_06097684.1| conserved hypothetical protein [Brucella sp. 83/13] gi|264663541|gb|EEZ33802.1| conserved hypothetical protein [Brucella sp. 83/13] Length = 208 Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust. Identities = 40/135 (29%), Positives = 63/135 (46%), Gaps = 14/135 (10%) Query: 48 HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDS---ALAFSLPRIEKRDVVRILDL 104 E+ RI+G + + R ++ T RP T+ +S LA S P +K + VR+LDL Sbjct: 18 REAAVRIVGGK--FRGRALVTPSTNAIRPTTDRTRESLFNILAHSFP--DKVEGVRVLDL 73 Query: 105 GTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-----RFDTLQSDWFS 159 GTGA+ L L + V+ S + I + N G+ R D Q Sbjct: 74 FAGTGALGLEALSRGARYATF-VEESAEGRGILRQNIEALGLQGHTKILRRDACQLGIVG 132 Query: 160 SVEGLFDVIVSNPPY 174 ++E FD++ ++PPY Sbjct: 133 TME-PFDLVFADPPY 146 >gi|262192556|ref|ZP_06050706.1| ribosomal protein L11 methyltransferase [Vibrio cholerae CT 5369-93] gi|262031601|gb|EEY50189.1| ribosomal protein L11 methyltransferase [Vibrio cholerae CT 5369-93] Length = 295 Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust. Identities = 27/73 (36%), Positives = 42/73 (57%), Gaps = 6/73 (8%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159 ++D G G+G + +A +K K +G+DI +AL +K NA NGV ++ + L D Sbjct: 163 VIDFGCGSGILAIAAIKLG-AAKVIGIDIDPQALLASKDNAARNGVEDQIEVYLPKD--- 218 Query: 160 SVEGLF-DVIVSN 171 EGL DV+V+N Sbjct: 219 QPEGLVADVVVAN 231 >gi|118586739|ref|ZP_01544176.1| N6-adenine-specific methylase [Oenococcus oeni ATCC BAA-1163] gi|118432827|gb|EAV39556.1| N6-adenine-specific methylase [Oenococcus oeni ATCC BAA-1163] Length = 209 Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust. Identities = 27/112 (24%), Positives = 56/112 (50%), Gaps = 10/112 (8%) Query: 75 RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134 RP TE + ++ + P K +V LDL G+G++ + + + K VD + A+ Sbjct: 22 RPTTEKVKEALFSIIAP-YNKPGIV--LDLYAGSGSLGIEAVSRG-YRKAYLVDHARPAI 77 Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPPYIESVIV 180 E+ ++N + E F+ +++ +++ FD+++ +PPY + IV Sbjct: 78 EVIRNNVIATKSPENFEIIKAPASQAIKQFFDNQIRFDLVIFDPPYAKQHIV 129 >gi|302654689|ref|XP_003019145.1| S-adenosylmethionine-dependent methyltransferase, putative [Trichophyton verrucosum HKI 0517] gi|291182849|gb|EFE38500.1| S-adenosylmethionine-dependent methyltransferase, putative [Trichophyton verrucosum HKI 0517] Length = 325 Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust. Identities = 23/43 (53%), Positives = 30/43 (69%), Gaps = 3/43 (6%) Query: 101 ILDLGTGTGAVCLALLKESPFFKG--VGVDISCKALEIAKSNA 141 ILDLGTG G++ L LL+E F G VGVD S K++E+A+ A Sbjct: 123 ILDLGTGNGSM-LTLLREEGGFSGPMVGVDYSVKSIELARQLA 164 >gi|262067059|ref|ZP_06026671.1| putative N-6 adenine-specific DNA methylase [Fusobacterium periodonticum ATCC 33693] gi|291379226|gb|EFE86744.1| putative N-6 adenine-specific DNA methylase [Fusobacterium periodonticum ATCC 33693] Length = 243 Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust. Identities = 25/83 (30%), Positives = 47/83 (56%), Gaps = 5/83 (6%) Query: 96 RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER----FD 151 ++ +ILD+GTG + L L K++ K GV+I + ++A N N ++E+ +D Sbjct: 42 KNTKKILDIGTGNAVIPLFLSKKTSA-KIYGVEIQEISYQLALRNININNLNEQIYIIYD 100 Query: 152 TLQSDWFSSVEGLFDVIVSNPPY 174 +++ G FD+++SNPP+ Sbjct: 101 NIKNYLKHFTIGSFDIVLSNPPF 123 >gi|256833716|ref|YP_003162443.1| rRNA (guanine-N(2)-)-methyltransferase [Jonesia denitrificans DSM 20603] gi|256687247|gb|ACV10140.1| rRNA (guanine-N(2)-)-methyltransferase [Jonesia denitrificans DSM 20603] Length = 394 Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust. Identities = 22/83 (26%), Positives = 40/83 (48%), Gaps = 1/83 (1%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 RI+D+G G G + + + + P D+S +A+ A++ N V +R D Sbjct: 244 ARIVDVGCGNGLLGVWIARHHPHVSVTMTDVSAQAVRSARATVDLNNVGDRVSVRWMDAL 303 Query: 159 SSV-EGLFDVIVSNPPYIESVIV 180 S + + D++V NPP+ + V Sbjct: 304 SQLPDHSADLVVCNPPFHDGTAV 326 >gi|119513581|ref|ZP_01632595.1| hypothetical protein N9414_10785 [Nodularia spumigena CCY9414] gi|119461763|gb|EAW42786.1| hypothetical protein N9414_10785 [Nodularia spumigena CCY9414] Length = 460 Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust. Identities = 18/47 (38%), Positives = 31/47 (65%) Query: 93 IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKS 139 +++ + R++DLG G G + L+K+ F + GVD+S +ALEIA+ Sbjct: 276 LKQSNAKRVIDLGCGQGNLVKRLVKDGFFDQITGVDVSYRALEIAQE 322 >gi|330944165|gb|EGH46282.1| SAM-dependent methyltransferase [Pseudomonas syringae pv. pisi str. 1704B] Length = 344 Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust. Identities = 33/113 (29%), Positives = 54/113 (47%), Gaps = 30/113 (26%) Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPP-YIESVI 179 VD S AL+ + NA NG +E+ ++ D F +++ L FDVIV++PP +I+ Sbjct: 249 VDASSFALDGVERNAALNGFAEKMTCIEGDVFEALKELKAAEERFDVIVADPPAFIK--- 305 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL-----CSVEI 227 R D + +G YR + + R L+KDG+ CS+ + Sbjct: 306 --------RKKDMK-------NGEGAYRRLNEQAMRLLSKDGILVSASCSMHL 343 >gi|325204818|gb|ADZ00272.1| ribosomal protein L11 methyltransferase [Neisseria meningitidis M01-240355] Length = 295 Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust. Identities = 28/74 (37%), Positives = 38/74 (51%), Gaps = 11/74 (14%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDW 157 +LD G G+G + +A LK VGVDI +A+ K NA N V +F D L Sbjct: 167 VLDYGCGSGILTIAALKLGAG-SAVGVDIDEQAVRAGKDNAEQNNVDAQFFLPDGLP--- 222 Query: 158 FSSVEGLFDVIVSN 171 +G FDV+V+N Sbjct: 223 ----QGQFDVVVAN 232 >gi|283836357|ref|ZP_06356098.1| ribosomal RNA small subunit methyltransferase D [Citrobacter youngae ATCC 29220] gi|291067724|gb|EFE05833.1| ribosomal RNA small subunit methyltransferase D [Citrobacter youngae ATCC 29220] Length = 378 Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust. Identities = 27/91 (29%), Positives = 49/91 (53%), Gaps = 4/91 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS--ERFDTLQSDWF 158 I+DLG G G + L LL+++P V VD S A+ ++ N +N +R + + ++ Sbjct: 232 IVDLGCGNGVIGLTLLEKNPQASVVFVDESPMAVASSRLNVESNMPEALDRCEFMINNAL 291 Query: 159 SSVEGL-FDVIVSNPPYIES-VIVDCLGLEV 187 S VE F+ ++ NPP+ + + D + E+ Sbjct: 292 SGVEPFRFNAVLCNPPFHQKHALTDNIAWEM 322 >gi|182418400|ref|ZP_02949694.1| methyltransferase domain family [Clostridium butyricum 5521] gi|237666919|ref|ZP_04526904.1| methyltransferase family protein [Clostridium butyricum E4 str. BoNT E BL5262] gi|182377782|gb|EDT75326.1| methyltransferase domain family [Clostridium butyricum 5521] gi|237658118|gb|EEP55673.1| methyltransferase family protein [Clostridium butyricum E4 str. BoNT E BL5262] Length = 262 Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust. Identities = 20/50 (40%), Positives = 30/50 (60%), Gaps = 4/50 (8%) Query: 99 VRILDLGTGTGAVCLALLKESPFF-KGVGVDISCKALEIAKSNAVTNGVS 147 + I++LG G+G C L SPF + VG+D S KA+E+AK + N + Sbjct: 56 MNIIELGCGSGRFCKEL---SPFINRYVGIDYSPKAIELAKEMVIRNNIK 102 >gi|156740571|ref|YP_001430700.1| RNA methyltransferase [Roseiflexus castenholzii DSM 13941] gi|156231899|gb|ABU56682.1| RNA methyltransferase, TrmA family [Roseiflexus castenholzii DSM 13941] Length = 439 Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust. Identities = 38/116 (32%), Positives = 59/116 (50%), Gaps = 13/116 (11%) Query: 67 LSSDTFEPRPETELLVDSALAFSLPRI-------EKRDVVRILDLGTGTGAVCLALLKES 119 L+ TF RP T V+ A A +L + E R R+LDL G GA L L + + Sbjct: 255 LADLTFLLRPTTFFQVNVAAAATLLNLIRAGLGDEARG--RLLDLYCGAGAFTLPLARNA 312 Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDW-FSSVEGLFDVIVSNPP 173 + VGV+ A+ A+ +A N +S RF T ++ ++++G FD +V +PP Sbjct: 313 --IEIVGVEEYAGAVADAERSAAVNHISNVRFITGSAEAVLANLDGPFDAVVLDPP 366 >gi|309810841|ref|ZP_07704642.1| methyltransferase small domain protein [Dermacoccus sp. Ellin185] gi|308435147|gb|EFP58978.1| methyltransferase small domain protein [Dermacoccus sp. Ellin185] Length = 517 Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust. Identities = 41/137 (29%), Positives = 57/137 (41%), Gaps = 13/137 (9%) Query: 89 SLPRIEKRDVVRI-LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147 +L R R VR LDLGTG G L V D++ +AL NA N + Sbjct: 163 TLARWTPRRTVRTALDLGTGCGVQAAHLAGHVEHI--VASDLATRALAFVCFNAALNDLD 220 Query: 148 ERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206 + L V G FD+IVSNPP++ + G+ ++ DGG G + Sbjct: 221 --VEVLAGSMLEPVAGRRFDLIVSNPPFV--ITPRRPGMPEYEY-----RDGGAVGDAVV 271 Query: 207 RTIADGVSRHLNKDGLC 223 R + V HL G+ Sbjct: 272 RNLVRDVGAHLEPGGVA 288 >gi|302541969|ref|ZP_07294311.1| methyltransferase type 12 [Streptomyces hygroscopicus ATCC 53653] gi|302459587|gb|EFL22680.1| methyltransferase type 12 [Streptomyces himastatinicus ATCC 53653] Length = 540 Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust. Identities = 21/50 (42%), Positives = 30/50 (60%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 R+LDLG G G + LLK++ F + VGVD+S +AL A + + ER Sbjct: 334 RVLDLGCGQGQLLGELLKDARFTEIVGVDVSIRALNEAARRLRLDRMPER 383 >gi|150024827|ref|YP_001295653.1| RNA methyltransferase [Flavobacterium psychrophilum JIP02/86] gi|149771368|emb|CAL42837.1| Probable RNA methyltransferase [Flavobacterium psychrophilum JIP02/86] Length = 471 Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust. Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 8/79 (10%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE------RFDTLQ 154 + DL TGTG + + K++ K +GV+ +A+ AK NA N +S + Sbjct: 327 VYDLYTGTGTIAQFVSKQAK--KVIGVEAVPEAIADAKENAKRNNISNCEFFVGDMKNVF 384 Query: 155 SDWFSSVEGLFDVIVSNPP 173 +D F + G DVI+++PP Sbjct: 385 NDAFIAQHGHPDVIITDPP 403 >gi|327481744|gb|AEA85054.1| putative methyltransferase [Pseudomonas stutzeri DSM 4166] Length = 266 Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust. Identities = 17/58 (29%), Positives = 34/58 (58%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 ++DLG+G G + +A +++ +G+D+ + + AK+NA GV+++ Q D F Sbjct: 60 VIDLGSGDGRIAIAAVRDRGADSALGIDLDPERIREAKANAEAAGVADKVSFEQGDLF 117 >gi|315445419|ref|YP_004078298.1| methylase involved in ubiquinone/menaquinone biosynthesis [Mycobacterium sp. Spyr1] gi|315263722|gb|ADU00464.1| methylase involved in ubiquinone/menaquinone biosynthesis [Mycobacterium sp. Spyr1] Length = 212 Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust. Identities = 21/52 (40%), Positives = 30/52 (57%), Gaps = 2/52 (3%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151 R+LD+G GTG + L + +GVD + A+E A+ NA T G+ RFD Sbjct: 44 RVLDVGCGTGEHTILLTAAG--YDVLGVDGAPSAVEQARHNAKTRGIDARFD 93 >gi|166159352|gb|ABY83144.1| Azi5 [Streptomyces sahachiroi] Length = 345 Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust. Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 1/62 (1%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 V RI+D+G G GA + L ++ P G VD+ +A G++ R DT +D+ Sbjct: 175 VRRIMDVGGGAGATLIELCRQHPHLSGTVVDLP-HVCALAGERIAAAGMTGRIDTAAADF 233 Query: 158 FS 159 F+ Sbjct: 234 FA 235 >gi|194097642|ref|YP_002000680.1| ribosomal protein L11 methyltransferase [Neisseria gonorrhoeae NCCP11945] gi|291044650|ref|ZP_06570359.1| ribosomal protein L11 methyltransferase [Neisseria gonorrhoeae DGI2] gi|193932932|gb|ACF28756.1| ribosomal protein L11 methyltransferase [Neisseria gonorrhoeae NCCP11945] gi|291011544|gb|EFE03540.1| ribosomal protein L11 methyltransferase [Neisseria gonorrhoeae DGI2] Length = 311 Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust. Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 11/74 (14%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDW 157 +LD G G+G + +A LK VGVDI +A+ + NA N V +F D+L Sbjct: 183 VLDYGCGSGILTIAALKLG-AGSAVGVDIDEQAVRAGRDNAEQNNVDAQFFLPDSLP--- 238 Query: 158 FSSVEGLFDVIVSN 171 +G FDV+V+N Sbjct: 239 ----QGQFDVVVAN 248 >gi|188590813|ref|YP_001795413.1| hypothetical protein RALTA_A0018 [Cupriavidus taiwanensis LMG 19424] gi|170937707|emb|CAP62691.1| conserved hypothetical protein; putative methyltransferase [Cupriavidus taiwanensis LMG 19424] Length = 297 Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust. Identities = 25/71 (35%), Positives = 36/71 (50%), Gaps = 1/71 (1%) Query: 101 ILDLGTGTGAVCLALLKE-SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ILD+G GTG+ LAL + GVDIS L +A++ A G++ F + + Sbjct: 56 ILDVGCGTGSTTLALARHIGAQGHCTGVDISGPMLAVARTRAQREGINASFIHADAQEHA 115 Query: 160 SVEGLFDVIVS 170 FD+IVS Sbjct: 116 FAAASFDMIVS 126 >gi|146283352|ref|YP_001173505.1| putative methyltransferase [Pseudomonas stutzeri A1501] gi|145571557|gb|ABP80663.1| putative methyltransferase [Pseudomonas stutzeri A1501] Length = 348 Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust. Identities = 17/58 (29%), Positives = 34/58 (58%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 ++DLG+G G + +A +++ +G+D+ + + AK+NA GV+++ Q D F Sbjct: 142 VIDLGSGDGRIAIAAVRDRGADSALGIDLDPERIREAKANAEAAGVADKVSFEQGDLF 199 >gi|126656703|ref|ZP_01727917.1| hypothetical protein CY0110_23731 [Cyanothece sp. CCY0110] gi|126621923|gb|EAZ92631.1| hypothetical protein CY0110_23731 [Cyanothece sp. CCY0110] Length = 210 Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust. Identities = 19/51 (37%), Positives = 27/51 (52%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151 +LD+ GTG LLK+ P + +GVDIS + L+IAK E + Sbjct: 44 VLDVACGTGIFVEMLLKDYPTLQIIGVDISSEMLKIAKQKCQNYSTVEFYQ 94 >gi|94500339|ref|ZP_01306872.1| hypothetical protein RED65_06958 [Oceanobacter sp. RED65] gi|94427638|gb|EAT12615.1| hypothetical protein RED65_06958 [Oceanobacter sp. RED65] Length = 240 Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust. Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 6/84 (7%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD---W 157 +LDLG GTG + L +L ++ G+++ A A +N + S R LQ+D W Sbjct: 41 VLDLGMGTGVLGL-MLAQAFDAHITGIELDSDACRDAHTNIEASPFSNRVRVLQADIRQW 99 Query: 158 FSSVEGLFDVIVSNPPYIESVIVD 181 + D+IVSNPP+ + + + Sbjct: 100 RDTRRS--DLIVSNPPFFTAHLAN 121 >gi|152987646|ref|YP_001348611.1| hypothetical protein PSPA7_3251 [Pseudomonas aeruginosa PA7] gi|150962804|gb|ABR84829.1| hypothetical protein PSPA7_3251 [Pseudomonas aeruginosa PA7] Length = 224 Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust. Identities = 33/117 (28%), Positives = 56/117 (47%), Gaps = 15/117 (12%) Query: 69 SDTFEPR-----PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 +D++E R P ELL + A L R+ +R R+L +G G G L + P ++ Sbjct: 9 ADSYESRIGCLLPGYELLHLLSRAQLLARLPER--ARLLSVGCGAGGELAELAGQRPGWR 66 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180 V +D+S L +A+ G+ ER D + V GL ++PPY ++++ Sbjct: 67 FVALDLSADMLALARQRFAMLGLLERIDLHCGE----VAGL----PASPPYDAALLL 115 >gi|260905515|ref|ZP_05913837.1| hypothetical protein BlinB_09305 [Brevibacterium linens BL2] Length = 562 Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust. Identities = 30/102 (29%), Positives = 48/102 (47%), Gaps = 4/102 (3%) Query: 89 SLPRIEKRDVVRI-LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147 +L + RD V + D+GTG G L L + S + + DIS +AL + +A NGV Sbjct: 172 TLVSLTPRDQVSVSADIGTGCGIQALLLARHSD--RVIATDISERALHLTGLSAELNGVG 229 Query: 148 ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRD 189 + + D++VSNPP++ + + E RD Sbjct: 230 -NIELRAGSMLEPLHEQVDLLVSNPPFVITPRTNVTTFEYRD 270 >gi|116750684|ref|YP_847371.1| type 11 methyltransferase [Syntrophobacter fumaroxidans MPOB] gi|116699748|gb|ABK18936.1| Methyltransferase type 11 [Syntrophobacter fumaroxidans MPOB] Length = 229 Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust. Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 2/73 (2%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ--SDWF 158 ILD+GTG G + L + +P + G+DIS + +A+ N G E ++ ++ Sbjct: 54 ILDVGTGPGRLLPELARLNPRLRLTGLDISRAMVSVARENMAQAGFGETISIVEAAANHV 113 Query: 159 SSVEGLFDVIVSN 171 +G FD +VS Sbjct: 114 PFPDGRFDAVVST 126 >gi|194337569|ref|YP_002019363.1| magnesium protoporphyrin O-methyltransferase [Pelodictyon phaeoclathratiforme BU-1] gi|194310046|gb|ACF44746.1| magnesium protoporphyrin O-methyltransferase [Pelodictyon phaeoclathratiforme BU-1] Length = 232 Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust. Identities = 25/69 (36%), Positives = 35/69 (50%), Gaps = 3/69 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 ILD G GTG + L K +K VDI+ + + AK A GV E+ T + + S Sbjct: 69 ILDAGCGTGLFSIRLAKAG--YKVTSVDIASQMVNKAKEEATRQGV-EKNITFEVNTLES 125 Query: 161 VEGLFDVIV 169 V G +D +V Sbjct: 126 VSGTYDAVV 134 >gi|326802758|ref|YP_004320576.1| N-6 DNA Methylase [Aerococcus urinae ACS-120-V-Col10a] gi|326650095|gb|AEA00278.1| N-6 DNA Methylase [Aerococcus urinae ACS-120-V-Col10a] Length = 287 Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust. Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 10/79 (12%) Query: 126 GVDISCKALEIAKSNAVTNGVSERF------DTLQSDWFSSVEGLFDVIVSNPPYIESVI 179 G +I+ +AK N + +GV DTL +DW + FD+++ NPPY + Sbjct: 9 GQEINTSTYNLAKMNMMLHGVPTDHQKLRNGDTLDADWPTDEPTNFDIVLMNPPYSQKWS 68 Query: 180 VDCLGLEVRDFDPRISLDG 198 D L+ DPR + G Sbjct: 69 ADKGFLD----DPRFAAYG 83 >gi|314950056|ref|ZP_07853344.1| type I restriction-modification system, M subunit [Enterococcus faecium TX0082] gi|313643614|gb|EFS08194.1| type I restriction-modification system, M subunit [Enterococcus faecium TX0082] Length = 492 Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust. Identities = 35/139 (25%), Positives = 56/139 (40%), Gaps = 23/139 (16%) Query: 72 FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES------PFFKGV 125 + P+P +L+ L E + + D G+G++ L K S +F Sbjct: 201 YTPQPVAKLMTQIVLQGK----EDKKGFSVYDATMGSGSLLLNAKKYSHQPGTISYF--- 253 Query: 126 GVDISCKALEIAKSNAVTNGVS------ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179 G +++ +A+ N + +GV DTL DW + FD ++ NPPY Sbjct: 254 GQELNTSTYNLARMNMILHGVPIANQHLHNADTLDQDWPTEEPTNFDGVLMNPPYSAKWS 313 Query: 180 VDCLGLEVRDFDPRISLDG 198 D L+ DPR S G Sbjct: 314 ADKGFLD----DPRFSAYG 328 >gi|289626787|ref|ZP_06459741.1| ribosomal RNA small subunit methyltransferase C [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289648352|ref|ZP_06479695.1| ribosomal RNA small subunit methyltransferase C [Pseudomonas syringae pv. aesculi str. 2250] gi|330868460|gb|EGH03169.1| ribosomal RNA small subunit methyltransferase C [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 332 Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust. Identities = 27/105 (25%), Positives = 44/105 (41%), Gaps = 2/105 (1%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 +D A L I+K +LD G G G + A+ + P + +D+ A ++ Sbjct: 176 LDRGSALLLENIDKLPSGNLLDFGCGAGVLGAAVKRRYPHNDVIMLDVDAFATASSRLTL 235 Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLE 186 NG+ + L D S + I+SNPP+ V D + E Sbjct: 236 AANGLQAQ--VLTGDGIDSAPMGLNTILSNPPFHVGVHTDYMATE 278 >gi|283853586|ref|ZP_06370823.1| ribosomal L11 methyltransferase [Desulfovibrio sp. FW1012B] gi|283571011|gb|EFC19034.1| ribosomal L11 methyltransferase [Desulfovibrio sp. FW1012B] Length = 286 Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust. Identities = 38/119 (31%), Positives = 56/119 (47%), Gaps = 8/119 (6%) Query: 76 PETELLVDS-ALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134 P T L +++ A F+ RI + R LDLGTG+G + + L K GVG+DI +A+ Sbjct: 131 PTTALCLEAFADCFAAGRIGPGN--RFLDLGTGSGILGIGLCKLG--LTGVGLDIDPQAV 186 Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDP 192 A N N V S EG +FD++ +N + + +V G VR P Sbjct: 187 WCAAENLRRNHVEAAMGLAVGGAGSLAEGAVFDIVAAN--ILAAPLVAMAGRLVRHVAP 243 >gi|229003841|ref|ZP_04161650.1| Methyltransferase [Bacillus mycoides Rock1-4] gi|228757442|gb|EEM06678.1| Methyltransferase [Bacillus mycoides Rock1-4] Length = 250 Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust. Identities = 36/138 (26%), Positives = 60/138 (43%), Gaps = 18/138 (13%) Query: 48 HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTG 107 ++ + R GW DF + T+E E + R + DV +LD+GTG Sbjct: 10 YDKVGRSNGW-DFSKLEYVTEGATWEFYEEV-----------IERCKSSDV--LLDIGTG 55 Query: 108 TGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEGLFD 166 G L + + F +G+D S +E A+SN VS RF ++SD FD Sbjct: 56 GGENVLRIAPAALFM--IGIDNSSGMIEKAQSNLEKASVSNVRFFKMESDGLMFPHSFFD 113 Query: 167 VI-VSNPPYIESVIVDCL 183 ++ + P++ + I + Sbjct: 114 IVSCCHAPFVAAEIAKVI 131 >gi|237809371|ref|YP_002893811.1| RNA methyltransferase, TrmA family [Tolumonas auensis DSM 9187] gi|237501632|gb|ACQ94225.1| RNA methyltransferase, TrmA family [Tolumonas auensis DSM 9187] Length = 447 Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust. Identities = 37/154 (24%), Positives = 81/154 (52%), Gaps = 27/154 (17%) Query: 40 NAIVRSLKHESIHRILGWR------------DFYNVRLTLSSDTF---EPRPETELLVDS 84 ++++ ++ E ++RILG + + + + ++S+ +F P+ +T+ L + Sbjct: 233 DSVIHNINPERVNRILGSQQRVCYGAEAIEDELHGLTFSISAHSFYQVNPQ-QTDQLYAT 291 Query: 85 ALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN 144 AL F+ E + ++D+ G G + L L +E+ K +G+++ +A+E A+SNA N Sbjct: 292 ALQFA----ELKGDETVVDIYCGIGTISLYLAQEAS--KVIGIEVVSQAIEDARSNAKRN 345 Query: 145 GV--SERFDTLQSDWFSSV--EGL-FDVIVSNPP 173 + +E + + ++ +GL DV+V +PP Sbjct: 346 QLDNTEFYVGKAEEVVPALYAQGLRADVVVVDPP 379 >gi|297584203|ref|YP_003699983.1| putative RNA methylase [Bacillus selenitireducens MLS10] gi|297142660|gb|ADH99417.1| putative RNA methylase [Bacillus selenitireducens MLS10] Length = 380 Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust. Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 11/77 (14%) Query: 125 VGVDISCKALEIAKSNAVTNGVSE--RFDTLQSDWFSSVEGLFDVIVSNPPYIESV---- 178 +G D+ K +E+A++NA+ G+ + +F +++ F + F V+VSNPPY E + Sbjct: 256 LGTDLDPKMIELAENNAMEAGLGDIIQFKQMRASDFKPQKD-FGVVVSNPPYGERMQEKK 314 Query: 179 ----IVDCLGLEVRDFD 191 I LG +R FD Sbjct: 315 EVEQIYRELGQTLRPFD 331 >gi|39936145|ref|NP_948421.1| cyclopropane-fatty-acyl-phospholipid synthase [Rhodopseudomonas palustris CGA009] gi|39649999|emb|CAE28523.1| cyclopropane-fatty-acyl-phospholipid synthase [Rhodopseudomonas palustris CGA009] Length = 416 Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust. Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 2/71 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+LD+G+G G + L L E+ GV +S + L+ A + A G+++R L D + Sbjct: 174 RVLDIGSGWGGLGL-YLAETCGADVTGVTLSREQLQAANTRAAERGLADRARFLLQD-YR 231 Query: 160 SVEGLFDVIVS 170 V G FD IVS Sbjct: 232 DVPGPFDRIVS 242 >gi|329964803|ref|ZP_08301826.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Bacteroides fluxus YIT 12057] gi|328524654|gb|EGF51717.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Bacteroides fluxus YIT 12057] Length = 511 Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust. Identities = 31/114 (27%), Positives = 56/114 (49%), Gaps = 15/114 (13%) Query: 72 FEPRPETELLVDSALAFSLPRIEKRDV-----VRILDLGTGTGAVCLALLKESPFFKGVG 126 F+ P++ +S A++L +I + + DL TGTG + + K++ + +G Sbjct: 331 FKIGPKSFYQTNSEQAYNLYKIARNFAGLTGNELVYDLYTGTGTIANFVSKQAR--QVIG 388 Query: 127 VDISCKALEIAKSNAVTNGVSERF-------DTLQSDWFSSVEGLFDVIVSNPP 173 ++ +A+E AK NA NG+ D L D+ + G DVI+++PP Sbjct: 389 IEYVPEAIEDAKVNAEINGIHNTLFFAGDMKDMLTQDFINQY-GRPDVIITDPP 441 >gi|242813375|ref|XP_002486154.1| conserved hypothetical protein [Talaromyces stipitatus ATCC 10500] gi|218714493|gb|EED13916.1| conserved hypothetical protein [Talaromyces stipitatus ATCC 10500] Length = 350 Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust. Identities = 43/151 (28%), Positives = 64/151 (42%), Gaps = 20/151 (13%) Query: 23 IVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLV 82 VD S DDR IV S+K+ + F + L +D E + +LL Sbjct: 44 FVDAASSFDDR------TTIVSSIKNYKYENGRRYHSFRDGEYLLPNDERE-QERLDLLH 96 Query: 83 DS---ALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKS 139 + L+ L R + VR+LD GTGTG + +E+P + +G D+S S Sbjct: 97 HTFRLVLSGDLYRAPIHNPVRVLDFGTGTGVWAIDFAEENPSTEVLGTDLSPIQPSWFPS 156 Query: 140 NAVTNGVSERF--DTLQSDWFSSVEGLFDVI 168 N RF D ++S+W + FD I Sbjct: 157 NC-------RFEVDDVESEWLYGYQP-FDYI 179 >gi|154275640|ref|XP_001538671.1| predicted protein [Ajellomyces capsulatus NAm1] gi|150415111|gb|EDN10473.1| predicted protein [Ajellomyces capsulatus NAm1] Length = 357 Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust. Identities = 22/42 (52%), Positives = 30/42 (71%), Gaps = 4/42 (9%) Query: 101 ILDLGTGTGAVCLALLKESPFFKG---VGVDISCKALEIAKS 139 ILDLGTG G++ LALL++ F G VGVD S K++E+A+ Sbjct: 185 ILDLGTGNGSM-LALLRDEGGFTGGQMVGVDYSSKSIELARQ 225 >gi|41406223|ref|NP_959059.1| hypothetical protein MAP0125c [Mycobacterium avium subsp. paratuberculosis K-10] gi|41394571|gb|AAS02442.1| hypothetical protein MAP_0125c [Mycobacterium avium subsp. paratuberculosis K-10] Length = 231 Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust. Identities = 43/173 (24%), Positives = 74/173 (42%), Gaps = 27/173 (15%) Query: 73 EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCK 132 EP+PE L+++ +LD G G AV L L + F VG+D S Sbjct: 34 EPQPEIAALIEAGKFHG----------DVLDAGCGEAAVSLYLAERG--FTTVGLDQSPT 81 Query: 133 ALEIAKSNAVTNGV-SERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFD 191 A+++A+ A G+ S F+ F+ +G F IV +S + + +E+R+ Sbjct: 82 AIKLAREKAARRGLTSASFEVADISDFTGYDGRFGTIV------DSTLFHSMPVELREGY 135 Query: 192 PRISLDGGIDGLSHYRTI-------ADGVSRHLNKDGLCSVEIGYNQKVDVVR 237 R + G S++ + A+G + +D L V +G +D +R Sbjct: 136 QRSIVRAAAPGASYFVLVFDRNAMPAEGPVNAVTEDELREV-VGKYWVIDEIR 187 >gi|296273668|ref|YP_003656299.1| methyltransferase small [Arcobacter nitrofigilis DSM 7299] gi|296097842|gb|ADG93792.1| methyltransferase small [Arcobacter nitrofigilis DSM 7299] Length = 236 Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust. Identities = 21/82 (25%), Positives = 43/82 (52%), Gaps = 3/82 (3%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER-FDTLQSDWF 158 +LD+G+G+G + L + +++P ++ K E+ K N+ N + + + D Sbjct: 36 ELLDIGSGSGILGLLVARDNPRLNLNQCEVQEKFQELTKINSKNNKIESKIYKGKYQDI- 94 Query: 159 SSVEGLFDVIVSNPPYIESVIV 180 + + FD+ VSNPP+ + +V Sbjct: 95 -NFDKTFDICVSNPPFYHTNVV 115 >gi|302510681|ref|XP_003017292.1| hypothetical protein ARB_04171 [Arthroderma benhamiae CBS 112371] gi|291180863|gb|EFE36647.1| hypothetical protein ARB_04171 [Arthroderma benhamiae CBS 112371] Length = 398 Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust. Identities = 45/161 (27%), Positives = 67/161 (41%), Gaps = 34/161 (21%) Query: 49 ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVD--SALAFSLPRIEKRDVVRILDLGT 106 + + ILG + F + + PRP+TE + + R+ ++I+D+ T Sbjct: 70 KPLQYILGDQPFGELTILCREGVLIPRPDTESYTTRIAQRLLAENRLNPTRSIQIIDICT 129 Query: 107 GTGAVCLALLKES----PFFKGVGVDISCKALEIAKSN---AVTNG--VSERFDT----- 152 GTG + L L P +GVDIS AL +AK N + NG +S D Sbjct: 130 GTGCIPLLLHSLLASSVPTISIIGVDISATALSLAKKNLEYNIGNGSLLSRARDEIHFVH 189 Query: 153 --------LQSDWFSSVEGL----------FDVIVSNPPYI 175 L+SD E L D+++SNPPYI Sbjct: 190 ADILDPCYLESDGSELGEMLSRSNQGHSKGLDLLISNPPYI 230 >gi|169599420|ref|XP_001793133.1| hypothetical protein SNOG_02531 [Phaeosphaeria nodorum SN15] gi|160704606|gb|EAT90743.2| hypothetical protein SNOG_02531 [Phaeosphaeria nodorum SN15] Length = 253 Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust. Identities = 28/85 (32%), Positives = 40/85 (47%), Gaps = 13/85 (15%) Query: 96 RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155 +D RI+DLG GTG C+ + E P + +GVD+S I S + N E D + S Sbjct: 16 KDPKRIIDLGCGTGIWCMDMADEHPGAELIGVDLS----PIQPSFSPPNCKFE-LDDVTS 70 Query: 156 DW--------FSSVEGLFDVIVSNP 172 W F ++ GL+ I P Sbjct: 71 PWTYPTSHFDFVNIRGLYGSIADWP 95 >gi|90580618|ref|ZP_01236423.1| hypothetical 16S RNA G1207 methylase RsmC [Vibrio angustum S14] gi|90438276|gb|EAS63462.1| hypothetical 16S RNA G1207 methylase RsmC [Photobacterium angustum S14] Length = 340 Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust. Identities = 27/98 (27%), Positives = 49/98 (50%), Gaps = 12/98 (12%) Query: 78 TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137 +ELL+++ LP++ + +LD G G G + + + P DIS A+E A Sbjct: 189 SELLLNN-----LPKLHGK----VLDFGCGAGVIGAVMKAKYPTIDLELCDISALAIESA 239 Query: 138 KSN-AVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174 K V N + +F +D + ++ G + ++SNPP+ Sbjct: 240 KETFKVNNLEASKFTA--TDVYKTLTGPYQFLISNPPF 275 >gi|326403629|ref|YP_004283711.1| hypothetical protein ACMV_14820 [Acidiphilium multivorum AIU301] gi|325050491|dbj|BAJ80829.1| hypothetical protein ACMV_14820 [Acidiphilium multivorum AIU301] Length = 239 Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust. Identities = 23/82 (28%), Positives = 36/82 (43%) Query: 93 IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152 + R R+++ GTG GA L L P +GVG++ + +A+ N TNG Sbjct: 35 VPARPGERVIEAGTGAGAGLLCLSYRVPELRGVGIERDPELAALARDNLRTNGFEGTTII 94 Query: 153 LQSDWFSSVEGLFDVIVSNPPY 174 + G D +NPP+ Sbjct: 95 TADITGPPLTGPVDHAFANPPW 116 >gi|315633698|ref|ZP_07888988.1| ribosomal protein L11 methyltransferase [Aggregatibacter segnis ATCC 33393] gi|315477740|gb|EFU68482.1| ribosomal protein L11 methyltransferase [Aggregatibacter segnis ATCC 33393] Length = 294 Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust. Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 2/71 (2%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 ++D G G+G + +A LK VG+DI +A+ +++NA NGV++R SD S Sbjct: 162 VIDFGCGSGILAIAALKLGAK-SAVGIDIDPQAILASRNNAEQNGVADRLQLFLSDEKPS 220 Query: 161 VEGLFDVIVSN 171 + DV+V+N Sbjct: 221 -DLKADVVVAN 230 >gi|210622662|ref|ZP_03293302.1| hypothetical protein CLOHIR_01250 [Clostridium hiranonis DSM 13275] gi|210154100|gb|EEA85106.1| hypothetical protein CLOHIR_01250 [Clostridium hiranonis DSM 13275] Length = 386 Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust. Identities = 25/57 (43%), Positives = 33/57 (57%), Gaps = 3/57 (5%) Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW--FSSVEGLFDVIVSNPPYIE 176 FK G DI +++EIAK NA GV++ D +D F S E + IV+NPPY E Sbjct: 255 FKIYGYDIDPESIEIAKENAEIAGVADYIDFAVADATEFKSDEE-YGFIVTNPPYGE 310 >gi|154174576|ref|YP_001407723.1| ribosomal protein L11 methyltransferase [Campylobacter curvus 525.92] gi|153793114|gb|EAU00995.2| ribosomal protein L11 methyltransferase [Campylobacter curvus 525.92] Length = 277 Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust. Identities = 33/119 (27%), Positives = 55/119 (46%), Gaps = 32/119 (26%) Query: 73 EPRPETELLVDSALAFSLPRIEK------------RDVVRILDLGTGTGAVCLALLKESP 120 E + T +++D ALAF E ++ LD+G G+G + +AL K Sbjct: 107 ELKGVTNIIIDPALAFGSGHHESTGSCLLFLQKYAKNADEALDVGCGSGILSIALAK--- 163 Query: 121 FFKGVGVDISC-----KALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL---FDVIVSN 171 +G D+ +A+E +KSNA+ NGV+ W S+ L +D++V+N Sbjct: 164 ----LGCDVEACDTDEQAIESSKSNAMLNGVN-----FSKIWVGSIANLDKKYDIVVAN 213 >gi|108762522|ref|YP_629811.1| hypothetical protein MXAN_1559 [Myxococcus xanthus DK 1622] gi|108466402|gb|ABF91587.1| conserved hypothetical protein [Myxococcus xanthus DK 1622] Length = 201 Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust. Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 6/87 (6%) Query: 72 FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131 F P PE VD LA L ++ D V DLG+G G + ++ +++ VGVDI+ Sbjct: 47 FVPTPEGA--VDGMLA--LAGVKPGDTV--YDLGSGDGRIVISAVQKHGAKHAVGVDINP 100 Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWF 158 + + A NA GV + + Q D F Sbjct: 101 ERIAEANQNASQAGVKNKVEFRQGDLF 127 >gi|330965059|gb|EGH65319.1| SAM-dependent methyltransferase [Pseudomonas syringae pv. actinidiae str. M302091] Length = 398 Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust. Identities = 33/113 (29%), Positives = 54/113 (47%), Gaps = 30/113 (26%) Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPP-YIESVI 179 VD S AL+ + NA NG +E+ ++ D F +++ L FDVIV++PP +I+ Sbjct: 249 VDASSFALDGVERNAALNGFAEKMTCIEGDVFEALKELKAGEERFDVIVADPPAFIK--- 305 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL-----CSVEI 227 R D + +G YR + + R L+KDG+ CS+ + Sbjct: 306 --------RKKDMK-------NGEGAYRRLNEQAMRLLSKDGILISASCSMHL 343 >gi|329939422|ref|ZP_08288758.1| transferase [Streptomyces griseoaurantiacus M045] gi|329301651|gb|EGG45545.1| transferase [Streptomyces griseoaurantiacus M045] Length = 514 Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust. Identities = 36/126 (28%), Positives = 54/126 (42%), Gaps = 18/126 (14%) Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 LDLGTG+G L + + + D++ +AL I +G + D + F V Sbjct: 178 LDLGTGSGIQALHASRHA--TRVTATDVNPRALHITALTLALSG-APAADLREGSLFEPV 234 Query: 162 --EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL-DGGIDGLSHYRTIADGVSRHLN 218 E +D+IVSNPP++ S D R++ DGG+ G RT+ LN Sbjct: 235 PEEETYDLIVSNPPFVISP------------DARLTYRDGGMAGDDLCRTLVQQAGGRLN 282 Query: 219 KDGLCS 224 G Sbjct: 283 PGGFAQ 288 >gi|320527423|ref|ZP_08028604.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Solobacterium moorei F0204] gi|320132136|gb|EFW24685.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Solobacterium moorei F0204] Length = 377 Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust. Identities = 35/111 (31%), Positives = 61/111 (54%), Gaps = 10/111 (9%) Query: 67 LSSDTF-EPRPE-TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 +SS +F + PE TE+L +AL SL +I+ DVV LD G G + L + + Sbjct: 204 ISSKSFYQVNPEQTEVLYRTAL--SLVKIKDTDVV--LDACCGIGTISLLAAQSAKHV-- 257 Query: 125 VGVDISCKALEIAKSNAVTNGV--SERFDTLQSDWFSSVEGLFDVIVSNPP 173 +GV+I+ +A+ AK+NA N + +E + +++ + DV++ +PP Sbjct: 258 IGVEINPQAIRDAKNNAKHNKLLNTEFYAADATEFIQRMNIKTDVVILDPP 308 >gi|306842721|ref|ZP_07475364.1| methyltransferase small [Brucella sp. BO2] gi|306287167|gb|EFM58669.1| methyltransferase small [Brucella sp. BO2] Length = 340 Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust. Identities = 30/114 (26%), Positives = 49/114 (42%), Gaps = 8/114 (7%) Query: 73 EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV-DISC 131 EP + +D A +EK + DLG G G + LK + K + + + Sbjct: 172 EPGMFSHGAIDKGSALLARHMEKIVFGNVADLGAGWGYLAAQCLKYADRIKNIDLYEADY 231 Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWF----SSVEGLFDVIVSNPPYIESVIVD 181 +ALE A N G S + +WF + G++D ++ NPP+ E + D Sbjct: 232 EALEAAGGNLERLGAS---IPISFNWFDVTSEKIAGIYDTVIMNPPFHEGRVTD 282 >gi|159026016|emb|CAO86270.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 262 Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust. Identities = 32/90 (35%), Positives = 46/90 (51%), Gaps = 8/90 (8%) Query: 50 SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109 SI G R+F+NV LS T + + + L++ L F +P + ILD+G G G Sbjct: 18 SIREFYGEREFFNVGYWLSH-TQDQQEASSTLMEKLLEF-IPNKQGT----ILDVGCGLG 71 Query: 110 AVCLALLKESPFFKGVGVDISCKALEIAKS 139 A LLK P VG++IS +IA+S Sbjct: 72 ATTHYLLKYYPLTAIVGINIS--PTQIARS 99 >gi|222823924|ref|YP_002575498.1| methylase [Campylobacter lari RM2100] gi|222539146|gb|ACM64247.1| conserved hypothetical protein, possible methylase [Campylobacter lari RM2100] Length = 230 Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust. Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 11/82 (13%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN-----GVSERFDTLQ 154 ILD+G G G + L + ++ P K +DI + ++++ NA N G+ E F + Sbjct: 32 NILDIGCGCGILGLLIKQKFPNSKVYLLDIQEQNIKLSYKNAKENKLEIQGICEDFLNYK 91 Query: 155 SDWFSSVEGLFDVIVSNPPYIE 176 SD FD ++SNPP+ + Sbjct: 92 SDI------KFDFLISNPPFYK 107 >gi|300710301|ref|YP_003736115.1| pyridine nucleotide-disulfide oxidoreductase, class II, putative [Halalkalicoccus jeotgali B3] gi|299123984|gb|ADJ14323.1| pyridine nucleotide-disulfide oxidoreductase, class II, putative [Halalkalicoccus jeotgali B3] Length = 183 Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust. Identities = 28/74 (37%), Positives = 38/74 (51%), Gaps = 8/74 (10%) Query: 100 RILDLGTGTG--AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD- 156 R LD+ TG G A+CLA + +D S + LEIA+ A GVSER ++ D Sbjct: 36 RALDVATGGGRNAICLA----EHGYAVDAIDCSEEGLEIARDRASDRGVSERIGFVRDDV 91 Query: 157 -WFSSVEGLFDVIV 169 + G +DVIV Sbjct: 92 ETYDFPAGTYDVIV 105 >gi|297538148|ref|YP_003673917.1| ubiquinone biosynthesis O-methyltransferase [Methylotenera sp. 301] gi|297257495|gb|ADI29340.1| ubiquinone biosynthesis O-methyltransferase [Methylotenera sp. 301] Length = 246 Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust. Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 14/92 (15%) Query: 100 RILDLGTGTGAVCLALLKESPFFKG---VGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 R+LD+G G G +L ES +FKG VG+D+ KAL +AK + + +G + + + Sbjct: 63 RVLDVGCGGG-----ILSESMYFKGAEVVGIDLGEKALSVAKLHQLESGAKVDYQYIAVE 117 Query: 157 WFSSVE-GLFDVI-----VSNPPYIESVIVDC 182 ++ + FDV+ + + P S++ C Sbjct: 118 QLAAQQPASFDVVTCMEMLEHVPDPASIVAAC 149 >gi|294339085|emb|CAZ87437.1| putative S-adenosyl-L-methionine-dependent methyltransferase [Thiomonas sp. 3As] Length = 194 Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust. Identities = 31/92 (33%), Positives = 43/92 (46%), Gaps = 10/92 (10%) Query: 92 RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG------ 145 RIE +L+LG+G+GA+C A + V VD+ +A + + +A NG Sbjct: 46 RIEVSKPKVVLELGSGSGALCSAAASRWHDARLVTVDVDRQAPK--RLDAEHNGPSLKHS 103 Query: 146 --VSERFDTLQSDWFSSVEGLFDVIVSNPPYI 175 V + D SD G DV V NPPYI Sbjct: 104 HFVHDALDEALSDKIGLRLGTVDVAVCNPPYI 135 >gi|229525277|ref|ZP_04414682.1| ribosomal RNA small subunit methyltransferase C [Vibrio cholerae bv. albensis VL426] gi|229338858|gb|EEO03875.1| ribosomal RNA small subunit methyltransferase C [Vibrio cholerae bv. albensis VL426] Length = 244 Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust. Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 2/75 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 +++D+G G G + + K +P DIS A+ ++ V N + SD FS Sbjct: 107 KVIDIGCGAGVLGCVMAKLNPNIALEMTDISALAIRSSQETLVANQLHGH--VYPSDMFS 164 Query: 160 SVEGLFDVIVSNPPY 174 +D IV+NPP+ Sbjct: 165 DTGHHYDYIVTNPPF 179 >gi|331694923|ref|YP_004331162.1| type 11 methyltransferase [Pseudonocardia dioxanivorans CB1190] gi|326949612|gb|AEA23309.1| Methyltransferase type 11 [Pseudonocardia dioxanivorans CB1190] Length = 264 Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust. Identities = 26/72 (36%), Positives = 35/72 (48%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 +R+LDLG GTGA ALL +P + VD S + L A+ GV L+ Sbjct: 52 LRLLDLGCGTGASTAALLDAAPGAQVTAVDASAEMLAQARRKNWPPGVRFVHSRLEDLDR 111 Query: 159 SSVEGLFDVIVS 170 V G FD I++ Sbjct: 112 VGVTGPFDGILA 123 >gi|288560192|ref|YP_003423678.1| SAM-dependent methyltransferase [Methanobrevibacter ruminantium M1] gi|288542902|gb|ADC46786.1| SAM-dependent methyltransferase [Methanobrevibacter ruminantium M1] Length = 271 Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust. Identities = 23/56 (41%), Positives = 31/56 (55%), Gaps = 3/56 (5%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 ILDLG G G++ + L K++ GVD + K LEI NA G+ E TL+ D Sbjct: 63 ILDLGCGDGSITIPLAKKAKSV--TGVDSAYKMLEILNENAKKEGI-ENIRTLEED 115 >gi|256377581|ref|YP_003101241.1| methyltransferase type 12 [Actinosynnema mirum DSM 43827] gi|255921884|gb|ACU37395.1| Methyltransferase type 12 [Actinosynnema mirum DSM 43827] Length = 455 Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust. Identities = 27/80 (33%), Positives = 40/80 (50%), Gaps = 12/80 (15%) Query: 82 VDSALA---FSLPRIEKRDVVRIL---------DLGTGTGAVCLALLKESPFFKGVGVDI 129 +D+ALA SL R + V+ +L DLG G GA+ L+ E F + +GVD+ Sbjct: 243 LDNALAPPRVSLARQRRETVISVLREAGARSVVDLGCGGGALLRPLIAEPQFTRVLGVDV 302 Query: 130 SCKALEIAKSNAVTNGVSER 149 S AL +A + + ER Sbjct: 303 SAHALRVAARKLHLDTMGER 322 >gi|254422289|ref|ZP_05036007.1| hypothetical protein S7335_2439 [Synechococcus sp. PCC 7335] gi|196189778|gb|EDX84742.1| hypothetical protein S7335_2439 [Synechococcus sp. PCC 7335] Length = 475 Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust. Identities = 18/47 (38%), Positives = 30/47 (63%) Query: 93 IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKS 139 ++ + R++DLG G GA+ L ++ F + +GVD+S +ALE AK Sbjct: 280 LKSHNAKRVIDLGCGEGALLKVLWEDRFFERIMGVDVSFRALETAKK 326 >gi|330874682|gb|EGH08831.1| SAM-dependent methyltransferase [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 398 Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust. Identities = 33/113 (29%), Positives = 54/113 (47%), Gaps = 30/113 (26%) Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPP-YIESVI 179 VD S AL+ + NA NG +E+ ++ D F +++ L FDVIV++PP +I+ Sbjct: 249 VDASSFALDGVERNAALNGFAEKMTCIEGDVFEALKELKAGEERFDVIVADPPAFIK--- 305 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL-----CSVEI 227 R D + +G YR + + R L+KDG+ CS+ + Sbjct: 306 --------RKKDMK-------NGEGAYRRLNEQAMRLLSKDGILISASCSMHL 343 >gi|332286776|ref|YP_004418687.1| 2-oxoacid ferredoxin oxidoreductase [Pusillimonas sp. T7-7] gi|330430729|gb|AEC22063.1| 2-oxoacid ferredoxin oxidoreductase [Pusillimonas sp. T7-7] Length = 1176 Score = 38.1 bits (87), Expect = 1.3, Method: Composition-based stats. Identities = 34/115 (29%), Positives = 54/115 (46%), Gaps = 13/115 (11%) Query: 21 QVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETEL 80 QV+ +VL + R LT A+ ++L H+++ ++D Y V +SD F + Sbjct: 969 QVLAAEKAVLP-QGRPRLTMAVAQAL-----HKLMAYKDEYEVARLFTSDAFRQSLREQF 1022 Query: 81 LVDSALAFSL--PRIEKRD----VVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129 D +L F L P + +RD + R L LG G V +LL +G +DI Sbjct: 1023 EGDFSLRFHLAPPVLARRDPRTGIPRKLTLGPGMEKV-FSLLARGKILRGTWLDI 1076 >gi|325207478|gb|ADZ02930.1| ribosomal protein L11 methyltransferase [Neisseria meningitidis NZ-05/33] Length = 330 Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust. Identities = 27/74 (36%), Positives = 38/74 (51%), Gaps = 11/74 (14%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDW 157 +LD G G+G + +A LK VGVDI +A+ + NA N V +F D L Sbjct: 202 VLDYGCGSGILTIAALKLG-AGSAVGVDIDEQAVRAGRDNAAQNNVDAQFFLPDGLP--- 257 Query: 158 FSSVEGLFDVIVSN 171 +G FDV+V+N Sbjct: 258 ----QGQFDVVVAN 267 >gi|315303819|ref|ZP_07874310.1| protein YpsC [Listeria ivanovii FSL F6-596] gi|313627814|gb|EFR96456.1| protein YpsC [Listeria ivanovii FSL F6-596] Length = 424 Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust. Identities = 22/54 (40%), Positives = 33/54 (61%), Gaps = 3/54 (5%) Query: 125 VGVDISCKALEIAKSNAVTNGVSE--RFDTLQSDWFSSVEGLFDVIVSNPPYIE 176 +G DI + ++IAK NAV G+ + F LQ+ F + E + V+V+NPPY E Sbjct: 301 IGGDIDARLIDIAKQNAVEAGLGDLISFRQLQAADFQT-EDEYGVVVANPPYGE 353 >gi|313887799|ref|ZP_07821479.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Peptoniphilus harei ACS-146-V-Sch2b] gi|312846142|gb|EFR33523.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Peptoniphilus harei ACS-146-V-Sch2b] Length = 443 Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust. Identities = 33/106 (31%), Positives = 58/106 (54%), Gaps = 13/106 (12%) Query: 92 RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151 +I+ +D + + DL +GTG + L + + K +GV+I +A+E A+ NA NG+ + + Sbjct: 294 KIDAKDKL-VFDLYSGTGTITQVLAESAK--KVIGVEIVEEAVEAARENAKLNGI-DNVE 349 Query: 152 TLQSDWFSSVEGL---FDVIVSNPPY--IESVIVDCLGLEVRDFDP 192 + SD ++ L D+IV +PP I +D ++ DFDP Sbjct: 350 FIASDVLKVLDDLDKNPDLIVLDPPREGINPKAID----KIIDFDP 391 >gi|229120553|ref|ZP_04249798.1| Type I restriction-modification system, M subunit [Bacillus cereus 95/8201] gi|228662838|gb|EEL18433.1| Type I restriction-modification system, M subunit [Bacillus cereus 95/8201] Length = 530 Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust. Identities = 23/90 (25%), Positives = 41/90 (45%), Gaps = 9/90 (10%) Query: 94 EKRDVVRILDLGTGTGAVCLALLKESPFFKGV---GVDISCKALEIAKSNAVTNGVSER- 149 E + + + D G+G++ L + + V G +++ +AK N + +GV + Sbjct: 214 EDKKLFSVFDPTMGSGSLMLNIRNYINYPDSVKYHGQELNTTTYNLAKMNLILHGVDKED 273 Query: 150 -----FDTLQSDWFSSVEGLFDVIVSNPPY 174 DTL DW + FD ++ NPPY Sbjct: 274 IRLRNADTLNKDWPTEEPYTFDSVLMNPPY 303 >gi|198274964|ref|ZP_03207496.1| hypothetical protein BACPLE_01123 [Bacteroides plebeius DSM 17135] gi|198272411|gb|EDY96680.1| hypothetical protein BACPLE_01123 [Bacteroides plebeius DSM 17135] Length = 472 Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust. Identities = 26/80 (32%), Positives = 43/80 (53%), Gaps = 10/80 (12%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF-------DTL 153 + DL TGTG + + +++ K VG++ +A+E AK N+ NG+ D L Sbjct: 329 VYDLYTGTGTIANFVARQAR--KVVGIEYVPEAIEDAKVNSALNGIDNTLFYAGDMKDIL 386 Query: 154 QSDWFSSVEGLFDVIVSNPP 173 +D F + G DVI+++PP Sbjct: 387 TND-FIAEHGRPDVIITDPP 405 >gi|147794654|emb|CAN73506.1| hypothetical protein VITISV_007907 [Vitis vinifera] Length = 383 Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust. Identities = 24/84 (28%), Positives = 45/84 (53%), Gaps = 3/84 (3%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +L++G GTG + L LL+ + + V V + + +EI + +G+ ++ + D + Sbjct: 78 VLEIGPGTGNLTLRLLQAAQ--RVVAVXLDARMVEILRKRVAEHGLEDQLTVICKDALKT 135 Query: 161 VEGLFDVIVSNPPY-IESVIVDCL 183 FD++V+N PY I S +V L Sbjct: 136 DFPQFDLVVANIPYGISSPLVAKL 159 >gi|126347738|emb|CAJ89455.1| conserved hypothetical protein [Streptomyces ambofaciens ATCC 23877] Length = 248 Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust. Identities = 21/58 (36%), Positives = 34/58 (58%), Gaps = 1/58 (1%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 R+LDL +G+G + ++ F G GVDIS E A++ AV GV++R + + +D Sbjct: 38 TRVLDLASGSGEMLCTWARDL-GFTGTGVDISTVFTERARARAVELGVADRVEFVHAD 94 >gi|28867642|ref|NP_790261.1| hypothetical protein PSPTO_0412 [Pseudomonas syringae pv. tomato str. DC3000] gi|28850877|gb|AAO53956.1| conserved protein of unknown function [Pseudomonas syringae pv. tomato str. DC3000] gi|331014955|gb|EGH95011.1| SAM-dependent methyltransferase [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 398 Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust. Identities = 33/113 (29%), Positives = 54/113 (47%), Gaps = 30/113 (26%) Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPP-YIESVI 179 VD S AL+ + NA NG +E+ ++ D F +++ L FDVIV++PP +I+ Sbjct: 249 VDASSFALDGVERNAALNGFAEKMTCIEGDVFEALKELKAGEERFDVIVADPPAFIK--- 305 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL-----CSVEI 227 R D + +G YR + + R L+KDG+ CS+ + Sbjct: 306 --------RKKDMK-------NGEGAYRRLNEQAMRLLSKDGILISASCSMHL 343 >gi|306845523|ref|ZP_07478092.1| methyltransferase, putative [Brucella sp. BO1] gi|306273844|gb|EFM55671.1| methyltransferase, putative [Brucella sp. BO1] Length = 211 Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust. Identities = 40/135 (29%), Positives = 63/135 (46%), Gaps = 14/135 (10%) Query: 48 HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDS---ALAFSLPRIEKRDVVRILDL 104 E+ RI+G + + R ++ T RP T+ +S LA S P +K + VR+LDL Sbjct: 21 REAAVRIVGGK--FRGRALVTPSTNAIRPTTDRTRESLFNILAHSFP--DKVEGVRVLDL 76 Query: 105 GTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-----RFDTLQSDWFS 159 GTGA+ L L + V+ S + I + N G+ R D Q Sbjct: 77 FAGTGALGLEALSRGARYATF-VEESAEGRGILRQNIEALGLQGHTKILRRDACQLGIVG 135 Query: 160 SVEGLFDVIVSNPPY 174 ++E FD++ ++PPY Sbjct: 136 TME-PFDLVFADPPY 149 >gi|294790580|ref|ZP_06755738.1| type I restriction-modification system, M subunit [Scardovia inopinata F0304] gi|294458477|gb|EFG26830.1| type I restriction-modification system, M subunit [Scardovia inopinata F0304] Length = 566 Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust. Identities = 33/133 (24%), Positives = 56/133 (42%), Gaps = 30/133 (22%) Query: 94 EKRDVVR-------ILDLGTGTGAVCLALLKESPFFKG------VGVDISCKALEIAKSN 140 E +DV+ I D G+G++ L + KE G +++ +A+ N Sbjct: 239 ESKDVINNEDSTFTIYDPTMGSGSLLLTVQKELTGLDHRSRVHFYGQELNRTTFNLARMN 298 Query: 141 AVTNGVSER------FDTLQSDWFSSVEG-------LFDVIVSNPPYIESVIVDCLGLEV 187 + +GV + DTL+SDW V+ FD +V+NPPY + + ++ Sbjct: 299 LLMHGVGYQSMFLRNADTLESDWPDGVDAQGINHPLFFDAVVANPPYSQKWDNNATKMK- 357 Query: 188 RDFDPRISLDGGI 200 DPR G + Sbjct: 358 ---DPRFKEYGKL 367 >gi|222085073|ref|YP_002543603.1| cyclopropane-fatty-acyl-phospholipid synthase protein [Agrobacterium radiobacter K84] gi|221722521|gb|ACM25677.1| cyclopropane-fatty-acyl-phospholipid synthase protein [Agrobacterium radiobacter K84] Length = 419 Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust. Identities = 20/71 (28%), Positives = 39/71 (54%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+L++G+G G + + L + +P G+ +S + L++++ A G+S+R D+ Sbjct: 176 RVLEIGSGWGGMGMYLAEANPGLDFTGITLSEEQLKVSRERAAKRGLSDRVRFELQDYRY 235 Query: 160 SVEGLFDVIVS 170 + FD IVS Sbjct: 236 LKDRKFDRIVS 246 >gi|218888238|ref|YP_002437559.1| ribosomal L11 methyltransferase [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218759192|gb|ACL10091.1| ribosomal L11 methyltransferase [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 286 Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust. Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 2/76 (2%) Query: 96 RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155 R +R LDLGTG+G + + K GV DI A+E A+ N V N V+ D Sbjct: 151 RPGLRFLDLGTGSGILAIGCAKLG--MTGVATDIDMLAVENAEENRVINAVAPAIDVRLG 208 Query: 156 DWFSSVEGLFDVIVSN 171 ++ +DV+++N Sbjct: 209 STEAAQGERYDVLLAN 224 >gi|4590509|gb|AAD26590.1|AF136577_6 unknown [Synechococcus sp. PCC 7002] Length = 113 Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust. Identities = 16/61 (26%), Positives = 35/61 (57%) Query: 96 RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155 ++ +LDLGTGT + + L ++ P ++ G D++ L + + N V G++ + + + + Sbjct: 43 QETAFVLDLGTGTAQIPILLGQQRPQWQIKGTDLAQSMLALGQKNVVAAGLTAQIELVYA 102 Query: 156 D 156 D Sbjct: 103 D 103 >gi|330957099|gb|EGH57359.1| SAM-dependent methyltransferase [Pseudomonas syringae pv. maculicola str. ES4326] Length = 398 Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust. Identities = 33/113 (29%), Positives = 54/113 (47%), Gaps = 30/113 (26%) Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPP-YIESVI 179 VD S AL+ + NA NG +E+ ++ D F +++ L FDVIV++PP +I+ Sbjct: 249 VDASSFALDGVERNAALNGFAEKMTCIEGDVFEALKELKAGEERFDVIVADPPAFIK--- 305 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL-----CSVEI 227 R D + +G YR + + R L+KDG+ CS+ + Sbjct: 306 --------RKKDMK-------NGEGAYRRLNEQAMRLLSKDGILVSASCSMHL 343 >gi|306840966|ref|ZP_07473707.1| methyltransferase, putative [Brucella sp. BO2] gi|306289023|gb|EFM60288.1| methyltransferase, putative [Brucella sp. BO2] Length = 236 Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust. Identities = 40/135 (29%), Positives = 63/135 (46%), Gaps = 14/135 (10%) Query: 48 HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDS---ALAFSLPRIEKRDVVRILDL 104 E+ RI+G + + R ++ T RP T+ +S LA S P +K + VR+LDL Sbjct: 46 REAAVRIVGGK--FRGRALVTPSTNAIRPTTDRTRESLFNILAHSFP--DKVEGVRVLDL 101 Query: 105 GTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-----RFDTLQSDWFS 159 GTGA+ L L + V+ S + I + N G+ R D Q Sbjct: 102 FAGTGALGLEALSRGARYATF-VEESAEGRGILRQNIEALGLQGHTKILRRDACQLGIVG 160 Query: 160 SVEGLFDVIVSNPPY 174 ++E FD++ ++PPY Sbjct: 161 TME-PFDLVFADPPY 174 >gi|187934189|ref|YP_001887561.1| SAM-dependent methyltransferase [Clostridium botulinum B str. Eklund 17B] gi|187722342|gb|ACD23563.1| SAM-dependent methyltransferase [Clostridium botulinum B str. Eklund 17B] Length = 250 Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust. Identities = 22/84 (26%), Positives = 44/84 (52%), Gaps = 6/84 (7%) Query: 96 RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155 ++ R++DL TGTG + L + + G++I + + +A+ + N + ++ ++ Sbjct: 48 KNKYRVIDLCTGTGIIPFLLYGKYNPKEVYGLEIQEEMVNMAEKSVKLNALEDKITFIKE 107 Query: 156 DWFSSVEGL-----FDVIVSNPPY 174 D ++E L FDV+ NPPY Sbjct: 108 D-LKNIEYLKKMDKFDVVTVNPPY 130 >gi|33322013|gb|AAQ06725.1|AF496069_1 probable methyltransferase [Lactobacillus delbrueckii subsp. lactis] Length = 206 Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust. Identities = 36/137 (26%), Positives = 67/137 (48%), Gaps = 25/137 (18%) Query: 57 WRDFYNV-------RLTLSSDTFEP--RPETELLVDSALAF----------SLPRIEKRD 97 W+ +Y+V + + ++P + + + +D LAF ++ IE+ Sbjct: 43 WQKYYHVINLSRHLAIVPEWEDYQPAFKDQEIIRLDPGLAFGTGNHQTTQLAMLGIERAM 102 Query: 98 V--VRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQ 154 V + + D+GTG+G + +A K K V DIS +++ AK NA NG+ + + Sbjct: 103 VKPLTVADVGTGSGILAIAAHKLGA--KSVLATDISDESMTAAKENAALNGIHD-IALQK 159 Query: 155 SDWFSSVEGLFDVIVSN 171 + + V+G FD+IV+N Sbjct: 160 TSLLAGVDGKFDLIVAN 176 >gi|37521087|ref|NP_924464.1| hypothetical protein glr1518 [Gloeobacter violaceus PCC 7421] gi|35212083|dbj|BAC89459.1| glr1518 [Gloeobacter violaceus PCC 7421] Length = 440 Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust. Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 1/70 (1%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV-SERFDTLQSDWF 158 RILD G G+G LAL + +P + VG+D+S +++ +A+ +G S F L + Sbjct: 59 RILDAGCGSGFTSLALAQANPGARIVGIDLSERSVAVARERLAFHGFKSAEFHALPIERV 118 Query: 159 SSVEGLFDVI 168 + FD+I Sbjct: 119 GELGEDFDLI 128 >gi|331091394|ref|ZP_08340233.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Lachnospiraceae bacterium 2_1_46FAA] gi|330404258|gb|EGG83805.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Lachnospiraceae bacterium 2_1_46FAA] Length = 454 Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust. Identities = 33/82 (40%), Positives = 45/82 (54%), Gaps = 10/82 (12%) Query: 97 DVVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSE-RFDTLQ 154 D + I DL +GTG + L +P K V GV+I +A+E AK NA NG+S +F + Sbjct: 310 DNMTIYDLFSGTGTIGQIL---APVAKEVIGVEIIEEAVEAAKENAEHNGLSNCKF--IA 364 Query: 155 SDWFS---SVEGLFDVIVSNPP 173 D F +E DVIV +PP Sbjct: 365 GDVFKVLDEIEEKPDVIVLDPP 386 >gi|328950316|ref|YP_004367651.1| Ribosomal protein L11 methyltransferase [Marinithermus hydrothermalis DSM 14884] gi|328450640|gb|AEB11541.1| Ribosomal protein L11 methyltransferase [Marinithermus hydrothermalis DSM 14884] Length = 256 Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust. Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 5/73 (6%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 R+LDLGTG+G + +A + +GVD+ + A++NA N RF Sbjct: 122 ARVLDLGTGSGILAIAAAMRG--AEVLGVDVDASVIPQAEANARRNQAPARFKVGS---L 176 Query: 159 SSVEGLFDVIVSN 171 + E +D++V+N Sbjct: 177 EAAEPPYDLVVAN 189 >gi|238021858|ref|ZP_04602284.1| hypothetical protein GCWU000324_01762 [Kingella oralis ATCC 51147] gi|237866472|gb|EEP67514.1| hypothetical protein GCWU000324_01762 [Kingella oralis ATCC 51147] Length = 295 Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust. Identities = 27/74 (36%), Positives = 38/74 (51%), Gaps = 11/74 (14%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDW 157 +LD G G+G + +A LK GVDI +A++ + NAV N V F D L Sbjct: 167 VLDYGCGSGILTIAALKLG-AGSATGVDIDPQAIKASNDNAVQNEVQAAFYLPDGLP--- 222 Query: 158 FSSVEGLFDVIVSN 171 +G FDV+V+N Sbjct: 223 ----QGQFDVVVAN 232 >gi|223717793|dbj|BAH22767.1| putative methyltransferase [Microcystis aeruginosa K-139] Length = 262 Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust. Identities = 32/90 (35%), Positives = 46/90 (51%), Gaps = 8/90 (8%) Query: 50 SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109 SI G R+F+NV LS T + + + L++ L F +P + ILD+G G G Sbjct: 18 SIREFYGEREFFNVGYWLSH-TQDQQEASSTLMEKLLEF-IPNKQGT----ILDVGCGLG 71 Query: 110 AVCLALLKESPFFKGVGVDISCKALEIAKS 139 A LLK P VG++IS +IA+S Sbjct: 72 ATTHYLLKYYPLTAIVGINIS--PTQIARS 99 >gi|210621682|ref|ZP_03292758.1| hypothetical protein CLOHIR_00703 [Clostridium hiranonis DSM 13275] gi|210154661|gb|EEA85667.1| hypothetical protein CLOHIR_00703 [Clostridium hiranonis DSM 13275] Length = 183 Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust. Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 5/75 (6%) Query: 87 AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146 A +L ++E + LD+G GTG+VC+ ++P K V V+ A+E+ ++N GV Sbjct: 20 AIALSKLEIENAKSFLDVGAGTGSVCIEAALKNPEMKVVAVERHEHAVELIEANKEKFGV 79 Query: 147 S-----ERFDTLQSD 156 E + ++D Sbjct: 80 KNLEILEEYAPFETD 94 >gi|166368737|ref|YP_001661010.1| putative methyltransferase [Microcystis aeruginosa NIES-843] gi|166091110|dbj|BAG05818.1| putative methyltransferase [Microcystis aeruginosa NIES-843] Length = 262 Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust. Identities = 32/90 (35%), Positives = 46/90 (51%), Gaps = 8/90 (8%) Query: 50 SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109 SI G R+F+NV LS T + + + L++ L F +P + ILD+G G G Sbjct: 18 SIREFYGEREFFNVGYWLSH-TQDQQEASSTLMEKLLEF-IPNKQGT----ILDVGCGLG 71 Query: 110 AVCLALLKESPFFKGVGVDISCKALEIAKS 139 A LLK P VG++IS +IA+S Sbjct: 72 ATTHYLLKYYPLTAIVGINIS--PTQIARS 99 >gi|161869353|ref|YP_001598520.1| ribosomal protein L11 methyltransferase [Neisseria meningitidis 053442] gi|161594906|gb|ABX72566.1| ribosomal protein L11 methyltransferase [Neisseria meningitidis 053442] Length = 330 Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust. Identities = 28/74 (37%), Positives = 38/74 (51%), Gaps = 11/74 (14%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDW 157 +LD G G+G + +A LK VGVDI +A+ K NA N V +F + L S Sbjct: 202 VLDYGCGSGILTIAALKLG-AGSAVGVDIDEQAVRAGKDNAEQNNVDAQFYLPEQLPS-- 258 Query: 158 FSSVEGLFDVIVSN 171 G FDV+V+N Sbjct: 259 -----GQFDVVVAN 267 >gi|110803474|ref|YP_697596.1| hypothetical protein CPR_0266 [Clostridium perfringens SM101] gi|110683975|gb|ABG87345.1| conserved hypothetical protein [Clostridium perfringens SM101] Length = 249 Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust. Identities = 27/97 (27%), Positives = 46/97 (47%), Gaps = 6/97 (6%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 VD+ L + + ++ V LDL TGTG + + + + VG++I + E+A +A Sbjct: 33 VDAVLLANFANVNRKHSV--LDLCTGTGIIPFIIYGKKNPKEVVGIEIQEEFAEMANRSA 90 Query: 142 VTNGVSERFD----TLQSDWFSSVEGLFDVIVSNPPY 174 N V ++ L+ + FDV+ NPPY Sbjct: 91 KINDVQDKVSFICGDLKDKELNRSMPKFDVVTVNPPY 127 >gi|16329224|ref|NP_439952.1| hypothetical protein slr1117 [Synechocystis sp. PCC 6803] gi|1651704|dbj|BAA16632.1| slr1117 [Synechocystis sp. PCC 6803] Length = 253 Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust. Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 4/80 (5%) Query: 74 PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133 P ETE L A L RI+ +++ D+G GTGA L L + + +DI + Sbjct: 22 PGSETETLR----ALELTRIDPLAKLQVADIGCGTGASTLVLASKLQNAQITAIDIFPEF 77 Query: 134 LEIAKSNAVTNGVSERFDTL 153 L++ + A G SE+ +TL Sbjct: 78 LDVLSTRAKVMGYSEKIETL 97 >gi|303247328|ref|ZP_07333601.1| Methyltransferase type 11 [Desulfovibrio fructosovorans JJ] gi|302491242|gb|EFL51131.1| Methyltransferase type 11 [Desulfovibrio fructosovorans JJ] Length = 207 Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust. Identities = 44/156 (28%), Positives = 73/156 (46%), Gaps = 34/156 (21%) Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV-SERFDTLQSD--WF 158 LD+GTG+ AVC+ L K + V +D + LE+A+ N + + +ERF L++D Sbjct: 42 LDVGTGSAAVCIELAKITD-LSMVCLDAKPEVLELARENVTRHALPAERFRFLEADVTAI 100 Query: 159 SSVEGLFDVIVS--NPPYIE-----------------SVIVDCLGL-------EVRDFDP 192 +G D++VS + P+ E S ++ C G EVR P Sbjct: 101 PMEDGTVDLLVSRGSIPFWEDHVAAFAELNRVLAPGGSALIGC-GFSRYQPIEEVRAMRP 159 Query: 193 RISLDGGIDGLSHYRTIADG-VSRHLNKDGLCSVEI 227 + S +G D + ++ ADG + R L + G+ E+ Sbjct: 160 KWSGEGEKDSRNDWK--ADGYLPRVLKQAGIADAEV 193 >gi|213967814|ref|ZP_03395961.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato T1] gi|301382451|ref|ZP_07230869.1| SAM-dependent methyltransferase [Pseudomonas syringae pv. tomato Max13] gi|302061157|ref|ZP_07252698.1| SAM-dependent methyltransferase [Pseudomonas syringae pv. tomato K40] gi|302132050|ref|ZP_07258040.1| SAM-dependent methyltransferase [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213927590|gb|EEB61138.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato T1] Length = 398 Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust. Identities = 33/113 (29%), Positives = 54/113 (47%), Gaps = 30/113 (26%) Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPP-YIESVI 179 VD S AL+ + NA NG +E+ ++ D F +++ L FDVIV++PP +I+ Sbjct: 249 VDASSFALDGVERNAALNGFAEKMTCIEGDVFEALKELKAGEERFDVIVADPPAFIK--- 305 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL-----CSVEI 227 R D + +G YR + + R L+KDG+ CS+ + Sbjct: 306 --------RKKDMK-------NGEGAYRRLNEQAMRLLSKDGILISASCSMHL 343 >gi|218441023|ref|YP_002379352.1| RNA methylase [Cyanothece sp. PCC 7424] gi|218173751|gb|ACK72484.1| putative RNA methylase [Cyanothece sp. PCC 7424] Length = 211 Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust. Identities = 26/87 (29%), Positives = 47/87 (54%), Gaps = 9/87 (10%) Query: 76 PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF--KGVGVDISCKA 133 P +E +V L + ++ + D+ + DLG+G G + + K + + +GVGV+I K Sbjct: 56 PTSEAVVQEMLRIA--QVSENDI--LYDLGSGDGRIPI---KAAQLYGARGVGVEIDPKL 108 Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSS 160 ++ A NA GVS+R ++ D F + Sbjct: 109 VQEATENAKKAGVSDRVQFIEQDLFQT 135 >gi|145355780|ref|XP_001422128.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144582368|gb|ABP00445.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 493 Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust. Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 13/84 (15%) Query: 100 RILDLGTGTGAVCL--ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER-------- 149 R+LD+ TG L AL S V VD S AL++AK NA NG+ ++ Sbjct: 318 RVLDVCCYTGGFALNAALGGASDV---VAVDSSESALDMAKKNAELNGLQDKVNFVRADA 374 Query: 150 FDTLQSDWFSSVEGLFDVIVSNPP 173 FD +Q++ + G +DV+V +PP Sbjct: 375 FDFMQAEIDAGRAGSYDVVVLDPP 398 >gi|145596403|ref|YP_001160700.1| methyltransferase small [Salinispora tropica CNB-440] gi|145305740|gb|ABP56322.1| 16S rRNA m(2)G 1207 methyltransferase [Salinispora tropica CNB-440] Length = 201 Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust. Identities = 36/122 (29%), Positives = 53/122 (43%), Gaps = 12/122 (9%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LDLG G G + L P VD++ +A E+ +NA G + R D + Sbjct: 65 LLDLGCGFGPITCVLATSVPSATVWAVDVNERARELTTANAARVGAAGRVRVAPPDAVPA 124 Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220 FD I SNPP + + L + + PR++ GG+ L V+RHL D Sbjct: 125 AV-TFDQIWSNPPI--RIGKNELHQLLLRWLPRLA-PGGVAWLV--------VARHLGGD 172 Query: 221 GL 222 L Sbjct: 173 SL 174 >gi|59712995|ref|YP_205771.1| ribosomal protein L11 methyltransferase [Vibrio fischeri ES114] gi|197335525|ref|YP_002157181.1| ribosomal protein L11 methyltransferase [Vibrio fischeri MJ11] gi|81310870|sp|Q5E263|PRMA_VIBF1 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11 Mtase gi|226710127|sp|B5FC65|PRMA_VIBFM RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11 Mtase gi|59481096|gb|AAW86883.1| methylase for 50S ribosomal subunit protein L11 [Vibrio fischeri ES114] gi|197317015|gb|ACH66462.1| ribosomal protein L11 methyltransferase [Vibrio fischeri MJ11] Length = 294 Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust. Identities = 35/113 (30%), Positives = 58/113 (51%), Gaps = 19/113 (16%) Query: 74 PRPET-ELLVDSALAFS----------LPRIEKRDV--VRILDLGTGTGAVCLALLKESP 120 P P+ +++D LAF L +E D+ ++D G G+G + +A +K Sbjct: 123 PEPDAVNVMLDPGLAFGTGTHPTTSLCLEWLEGLDLEGKTVVDFGCGSGILAIAAIKLGA 182 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFSSVEGLF-DVIVSN 171 K +G+DI +A+ +K NA NGV+++ + L D EGL DV+V+N Sbjct: 183 A-KVIGIDIDPQAILASKDNATRNGVADQIELYLPQD---QPEGLIADVVVAN 231 >gi|45200911|ref|NP_986481.1| AGL186Cp [Ashbya gossypii ATCC 10895] gi|44985681|gb|AAS54305.1| AGL186Cp [Ashbya gossypii ATCC 10895] Length = 219 Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust. Identities = 30/128 (23%), Positives = 55/128 (42%), Gaps = 6/128 (4%) Query: 101 ILDLGTGTGAVCLALLKE---SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 + ++G G+G V +++ P + D+S AL + G ++D Sbjct: 45 VCEVGCGSGVVTAFMMQHEMPQPMSVYLATDVSPWALATTAETVQSTGCRGALCAARTDL 104 Query: 158 FSSV-EGLFDVIVSNPPYI--ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214 + + +G DV+V NPPY+ E V E + ++L+GG DG+ + + Sbjct: 105 VTGLADGQVDVLVFNPPYVPAEGVPQGPAAGEREERWLEVALEGGADGMEVTTRMLGALG 164 Query: 215 RHLNKDGL 222 R L G+ Sbjct: 165 RVLASSGV 172 >gi|30022540|ref|NP_834171.1| Type I restriction-modification system methylation subunit [Bacillus cereus ATCC 14579] gi|29898098|gb|AAP11372.1| Type I restriction-modification system methylation subunit [Bacillus cereus ATCC 14579] Length = 468 Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust. Identities = 23/90 (25%), Positives = 41/90 (45%), Gaps = 9/90 (10%) Query: 94 EKRDVVRILDLGTGTGAVCLAL---LKESPFFKGVGVDISCKALEIAKSNAVTNGVSER- 149 E + + + D G+G++ L + + K G +++ +AK N + +GV + Sbjct: 214 EDKKLFSVFDPTMGSGSLMLNIQNYINHPDSVKYHGQELNTTTYNLAKMNLILHGVDKED 273 Query: 150 -----FDTLQSDWFSSVEGLFDVIVSNPPY 174 DTL DW + FD ++ NPPY Sbjct: 274 MRLRNGDTLNKDWPTDEPYTFDSVLMNPPY 303 >gi|317177250|dbj|BAJ55039.1| Type I restriction enzyme M protein [Helicobacter pylori F16] Length = 543 Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust. Identities = 28/90 (31%), Positives = 44/90 (48%), Gaps = 9/90 (10%) Query: 94 EKRDVVRILDLGTGTGAVCLALLKE--SPFFKGVGVDISCKALEIAKSNAVTNGVSERF- 150 E V+I D GTG + +AL + + DIS K+L++ K N + N ++ Sbjct: 226 EPTQSVKIYDPSAGTGTLLMALAHQIGTDSCTLYAQDISQKSLKMLKLNLILNDLTHSLK 285 Query: 151 -----DTLQSDWFS-SVEGLFDVIVSNPPY 174 +TL + + S +G D IVSNPP+ Sbjct: 286 YAIEGNTLTNPYHSKECKGKMDYIVSNPPF 315 >gi|320012636|gb|ADW07486.1| Methyltransferase type 11 [Streptomyces flavogriseus ATCC 33331] Length = 290 Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust. Identities = 22/56 (39%), Positives = 30/56 (53%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 I+DLG GTGA ALL P VD S + L+ + A +GV R T+++D Sbjct: 56 IVDLGCGTGAGTFALLARFPEAHVTAVDSSAEHLQRLREKAGADGVEGRVRTVRAD 111 >gi|150866938|ref|XP_001386704.2| S-adenosylmethionine-dependent methyltransferase [Scheffersomyces stipitis CBS 6054] gi|149388194|gb|ABN68675.2| S-adenosylmethionine-dependent methyltransferase [Scheffersomyces stipitis CBS 6054] Length = 318 Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust. Identities = 64/245 (26%), Positives = 98/245 (40%), Gaps = 41/245 (16%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDS-ALAFSLPRIEKRD-----VVRILDL 104 + ILG + F ++ + PR ETE V A AF + + + ++D Sbjct: 61 LQYILGSQPFGSLDIHCRPGVLIPRWETEEWVTELADAFGKRKNTTNNGKLSNSLNVIDA 120 Query: 105 GTGTGAVCLALLKESPFF-KGV-----GVDISCKALEIAKSNAVTNGVS----------- 147 TGTG C+ LL S KGV G DIS +A +++ N S Sbjct: 121 CTGTG--CIPLLLHSDLLSKGVCSNVTGFDISLEAYKLSCENLAIYESSRDISDNGKVSF 178 Query: 148 ERFDTLQSDWFSSVEGL---FDVIVSNPPYI------ESVIVDCLGLEVRDFDPRISLDG 198 + D D +E D+I SNPPYI SV + VR +P ++L G Sbjct: 179 KHVDIFSHDLLEQLEVTSRSVDLITSNPPYIPLQDYKSSVDFNGTSRSVRLHEPALALVG 238 Query: 199 GIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR--IFESRKLFLVNAFKDYGGN 256 + Y T+ + E+GY ++ V+ +F +K + V + D GN Sbjct: 239 ENE---FYETLITKLVLPTKAKAFV-FELGYEEQAQRVKELLFPFKK-WKVKRYTDSAGN 293 Query: 257 DRVLL 261 R +L Sbjct: 294 IRCVL 298 >gi|66044239|ref|YP_234080.1| rRNA (guanine-N(2)-)-methyltransferase [Pseudomonas syringae pv. syringae B728a] gi|75503293|sp|Q4ZXT0|RSMC_PSEU2 RecName: Full=Ribosomal RNA small subunit methyltransferase C; AltName: Full=16S rRNA m2G1207 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rsmC gi|63254946|gb|AAY36042.1| rRNA (guanine-N(2)-)-methyltransferase [Pseudomonas syringae pv. syringae B728a] Length = 332 Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust. Identities = 26/105 (24%), Positives = 45/105 (42%), Gaps = 2/105 (1%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 +D A L I+K +LD G G G + A+ + P + + +D+ A ++ Sbjct: 176 LDRGSALLLENIDKLPSGNLLDFGCGAGVLGAAIKRRYPHNEVIMLDVDAFATASSRLTL 235 Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLE 186 NG+ + L D + + I+SNPP+ V D + E Sbjct: 236 AANGLQAQ--VLTGDGIDAAPMGLNTILSNPPFHVGVHTDYMATE 278 >gi|56967300|pdb|1XXL|A Chain A, The Crystal Structure Of Ycgj Protein From Bacillus Subitilis At 2.1 A Resolution gi|56967301|pdb|1XXL|B Chain B, The Crystal Structure Of Ycgj Protein From Bacillus Subitilis At 2.1 A Resolution gi|99032625|pdb|2GLU|A Chain A, The Crystal Structure Of Ycgj Protein From Bacillus Subitilis gi|99032626|pdb|2GLU|B Chain B, The Crystal Structure Of Ycgj Protein From Bacillus Subitilis Length = 239 Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust. Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 5/87 (5%) Query: 85 ALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG-VGVDISCKALEIAKSNAVT 143 +L + E R R+LD+G G G LA SP+ + +GVD + + +E+A S A Sbjct: 9 SLGLXIKTAECRAEHRVLDIGAGAGHTALAF---SPYVQECIGVDATKEXVEVASSFAQE 65 Query: 144 NGVSE-RFDTLQSDWFSSVEGLFDVIV 169 GV RF ++ + FD+I Sbjct: 66 KGVENVRFQQGTAESLPFPDDSFDIIT 92 >gi|330942318|gb|EGH44942.1| ribosomal RNA small subunit methyltransferase C [Pseudomonas syringae pv. pisi str. 1704B] Length = 332 Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust. Identities = 26/105 (24%), Positives = 45/105 (42%), Gaps = 2/105 (1%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 +D A L I+K +LD G G G + A+ + P + + +D+ A ++ Sbjct: 176 LDRGSALLLENIDKLPSGNLLDFGCGAGVLGAAIKRRYPHNEVIMLDVDAFATASSRLTL 235 Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLE 186 NG+ + L D + + I+SNPP+ V D + E Sbjct: 236 AANGLQAQ--VLTGDGIDAAPMGLNTILSNPPFHVGVHTDYMATE 278 >gi|330883391|gb|EGH17540.1| SAM-dependent methyltransferase [Pseudomonas syringae pv. glycinea str. race 4] Length = 190 Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust. Identities = 33/113 (29%), Positives = 54/113 (47%), Gaps = 30/113 (26%) Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPP-YIESVI 179 VD S AL+ + NA NG +E+ ++ D F +++ L FDVIV++PP +I+ Sbjct: 52 VDASSFALDGVERNAALNGFAEKMTCIEGDVFEALKELKAGEERFDVIVADPPAFIK--- 108 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL-----CSVEI 227 R D + +G YR + + R L+KDG+ CS+ + Sbjct: 109 --------RKKDMK-------NGEGAYRRLNEQAMRLLSKDGILVSASCSMHL 146 >gi|329766402|ref|ZP_08257948.1| putative methylase [Candidatus Nitrosoarchaeum limnia SFB1] gi|329137171|gb|EGG41461.1| putative methylase [Candidatus Nitrosoarchaeum limnia SFB1] Length = 181 Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust. Identities = 41/158 (25%), Positives = 68/158 (43%), Gaps = 35/158 (22%) Query: 67 LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126 L + + P +T + D IEK + + LD+G+G+G + L K F G Sbjct: 8 LRDEEYSPAEDTFFIAD--------YIEKENGLTALDVGSGSGYLTKLLAKNFIFVVGTD 59 Query: 127 VD-ISCKALEIAKSNAV-TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIES-VIVDCL 183 ++ I K + N V NG D L+S+ FD++V N PY+ + ++D Sbjct: 60 INFIVLKNQTYSTKNLVCCNGS----DALKSE--------FDLVVCNLPYLATDQVLDA- 106 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221 + DGGIDG + I D + +++ G Sbjct: 107 -----------TTDGGIDGFEIPKKIFDSIYKNIKVGG 133 >gi|317500123|ref|ZP_07958357.1| hypothetical protein HMPREF1026_00299 [Lachnospiraceae bacterium 8_1_57FAA] gi|331087648|ref|ZP_08336576.1| hypothetical protein HMPREF1025_00159 [Lachnospiraceae bacterium 3_1_46FAA] gi|316898478|gb|EFV20515.1| hypothetical protein HMPREF1026_00299 [Lachnospiraceae bacterium 8_1_57FAA] gi|330399827|gb|EGG79487.1| hypothetical protein HMPREF1025_00159 [Lachnospiraceae bacterium 3_1_46FAA] Length = 203 Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust. Identities = 46/143 (32%), Positives = 63/143 (44%), Gaps = 31/143 (21%) Query: 62 NVRLTLSSDTFEPRP---ETELLVDSALAFSLPRIEK---RDVVRILDLGTGTGAVCLAL 115 N+ S TF+ + +T + + A P IE +++ ILDLG GTGA+ L Sbjct: 2 NITKQKSQKTFDKQAADYDTNIQGEHARKLYKPIIENLKNKNIHSILDLGCGTGAL-LKE 60 Query: 116 LKESPFFKGV-GVDISCKALEIAKSNAVTN------GVSERFDTLQSDWFSSVEGLFDVI 168 +KE + + G+DIS LEIAK N + N G SER S FD I Sbjct: 61 IKELNIAEQLFGIDISPNMLEIAK-NKLGNDATLILGDSERLPFEDSS--------FDAI 111 Query: 169 VSN--------PPYIESVIVDCL 183 V N P +E + CL Sbjct: 112 VCNDSFHHYPQPDIVEKEVSRCL 134 >gi|315223192|ref|ZP_07865053.1| methyltransferase small domain protein [Streptococcus anginosus F0211] gi|315187624|gb|EFU21378.1| methyltransferase small domain protein [Streptococcus anginosus F0211] Length = 248 Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust. Identities = 29/99 (29%), Positives = 50/99 (50%), Gaps = 7/99 (7%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 VDS L P + KR + I+DL G GAV L + + + V+I + ++A+ + Sbjct: 33 VDSVLLSRFPNLPKRGL--IVDLCAGNGAVGLFASTRTK-AQIIAVEIQERLADMAERSI 89 Query: 142 VTNGVSERFDTLQSD---WFSSVEG-LFDVIVSNPPYIE 176 NG++ + +Q D ++G D+I+ NPPY + Sbjct: 90 ELNGLTHQMQVIQDDLKYLTHYIDGSKVDMILCNPPYFK 128 >gi|289580772|ref|YP_003479238.1| methylase [Natrialba magadii ATCC 43099] gi|289530325|gb|ADD04676.1| methylase [Natrialba magadii ATCC 43099] Length = 202 Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust. Identities = 44/177 (24%), Positives = 82/177 (46%), Gaps = 13/177 (7%) Query: 67 LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126 + ++ ++P ++ELL ++A + R + IL++GTG+G V + E+ + + Sbjct: 1 METEVYQPAEDSELLAEAACSQLSKRGREGPDATILEVGTGSGYVANRVADET-GARVIA 59 Query: 127 VDISCKALEIAKSNAVT------NGVSERFDTLQSDWFSS-VEGLFDVIVSNPPYIESVI 179 D++ A+ A+S G S +T+++D S + FD ++ NPPY+ + Sbjct: 60 SDLNPHAVRQARSEGSEESSEKGTGRSGAVETVRADLVSPFADDTFDAVLFNPPYLPTEP 119 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236 + E D+ +L GG DG + V R L DG+ + + VD V Sbjct: 120 EN----EWDDWMEH-ALSGGEDGRAVIDPFLASVGRVLAPDGVVYLLVSSLTGVDEV 171 >gi|268612020|ref|ZP_06145747.1| putative RNA methylase [Ruminococcus flavefaciens FD-1] Length = 353 Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust. Identities = 19/61 (31%), Positives = 31/61 (50%) Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESV 178 S F+G+G DI A+ + NA G+ R Q+D V+ +++ NPPY E + Sbjct: 233 SASFRGIGFDIDDDAVALTLDNAHKAGIKSRLKIEQADITKFVQPEDSIVICNPPYGERM 292 Query: 179 I 179 + Sbjct: 293 L 293 >gi|288930665|ref|YP_003434725.1| ribosomal L11 methyltransferase [Ferroglobus placidus DSM 10642] gi|288892913|gb|ADC64450.1| ribosomal L11 methyltransferase [Ferroglobus placidus DSM 10642] Length = 197 Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust. Identities = 29/117 (24%), Positives = 55/117 (47%), Gaps = 12/117 (10%) Query: 58 RDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117 + F N ++ L P E+++ + + + D+ + DLG GTG + +A Sbjct: 14 KGFKNPKIFLEQYVTPPALVAEIVLFAKM--------QNDLDLVFDLGCGTGIISIASAL 65 Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174 F +GVD+ +AL +A+ N+ T GV F + F++ + ++ NPP+ Sbjct: 66 LGAF--SIGVDVDREALSVARENSKTCGVPVDFVLCDVENFNAKKK--GTVIMNPPF 118 >gi|239501749|ref|ZP_04661059.1| Ribosomal RNA small subunit methyltransferase C [Acinetobacter baumannii AB900] Length = 337 Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust. Identities = 34/135 (25%), Positives = 54/135 (40%), Gaps = 3/135 (2%) Query: 47 KHESIHRILGWRDFYNVRLTLSSDTFEPRPE--TELLVDSALAFSLPRIEKRDVVRILDL 104 K E I + W Y V++ T P ++ +D A LP + + RI D Sbjct: 142 KIEKIKPLESWLKTYTVQVNEQELTICALPGVFSQTHLDVGTAVLLPYLNQVKSGRIADF 201 Query: 105 GTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV-SERFDTLQSDWFSSVEG 163 G G G + L K + +DI AL+ + NG+ S++ + Sbjct: 202 GCGAGIISCYLAKANSSNIIHALDIDAFALQSTEMTFSRNGIGSDQLRLQPVTGIADAPT 261 Query: 164 LFDVIVSNPPYIESV 178 D IVSNPP+ + + Sbjct: 262 ELDAIVSNPPFHQGI 276 >gi|330954994|gb|EGH55254.1| SAM-dependent methyltransferase [Pseudomonas syringae Cit 7] Length = 398 Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust. Identities = 33/113 (29%), Positives = 54/113 (47%), Gaps = 30/113 (26%) Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPP-YIESVI 179 VD S AL+ + NA NG +E+ ++ D F +++ L FDVIV++PP +I+ Sbjct: 249 VDASSFALDGVERNAALNGFAEKMTCIEGDVFEALKELKAAEERFDVIVADPPAFIK--- 305 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL-----CSVEI 227 R D + +G YR + + R L+KDG+ CS+ + Sbjct: 306 --------RKKDMK-------NGEGAYRRLNEQAMRLLSKDGILVSASCSMHL 343 >gi|313123576|ref|YP_004033835.1| ribosomal protein l11 methyltransferase [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|312280139|gb|ADQ60858.1| Ribosomal protein L11 methyltransferase [Lactobacillus delbrueckii subsp. bulgaricus ND02] Length = 314 Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust. Identities = 25/74 (33%), Positives = 42/74 (56%), Gaps = 4/74 (5%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 + + D+GTG+G + +A K K V DIS +++ AK NA NG+ + ++ Sbjct: 178 LTVADVGTGSGILAIAAHKLGA--KSVLATDISDESMTAAKENAALNGIHD-IALQKTSL 234 Query: 158 FSSVEGLFDVIVSN 171 + V+G FD+IV+N Sbjct: 235 LAGVDGKFDLIVAN 248 >gi|300853355|ref|YP_003778339.1| putative methyltransferase [Clostridium ljungdahlii DSM 13528] gi|300433470|gb|ADK13237.1| predicted methyltransferase [Clostridium ljungdahlii DSM 13528] Length = 250 Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust. Identities = 25/97 (25%), Positives = 51/97 (52%), Gaps = 6/97 (6%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 VD+ L + +I+ + + I+DL +GTG V + ++ G++I +++A + Sbjct: 33 VDAVLLANFAKIKPK--MNIIDLCSGTGIVPFIIAGKTKAQHITGMEIQKDMVDMATRSV 90 Query: 142 VTNGVSERFDTLQSDW--FSSVEGL--FDVIVSNPPY 174 + NG+ ++ + + D F ++ L DV+ NPPY Sbjct: 91 IFNGMEKKVEFIHRDLVDFEFLKKLPKADVVTVNPPY 127 >gi|302812046|ref|XP_002987711.1| hypothetical protein SELMODRAFT_126447 [Selaginella moellendorffii] gi|300144603|gb|EFJ11286.1| hypothetical protein SELMODRAFT_126447 [Selaginella moellendorffii] Length = 188 Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust. Identities = 28/79 (35%), Positives = 39/79 (49%), Gaps = 8/79 (10%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV-SERFDTL----- 153 ILD GTG+G + +A LK VGVDI A+ + SNA N + F+ Sbjct: 62 NILDYGTGSGILAIAALKMG-ASHAVGVDIDPMAVSSSASNATLNALDPHAFEVFIAAAD 120 Query: 154 -QSDWFSSVEGLFDVIVSN 171 + D G+FDV+V+N Sbjct: 121 DKDDPVPHGPGVFDVVVAN 139 >gi|297829886|ref|XP_002882825.1| hypothetical protein ARALYDRAFT_318122 [Arabidopsis lyrata subsp. lyrata] gi|297328665|gb|EFH59084.1| hypothetical protein ARALYDRAFT_318122 [Arabidopsis lyrata subsp. lyrata] Length = 278 Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust. Identities = 37/124 (29%), Positives = 59/124 (47%), Gaps = 12/124 (9%) Query: 63 VRLTLSS-DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL----K 117 +RL S + +EP ++ LVD+ LA IE + +++G G+G V +L+ Sbjct: 40 IRLVSSHREVYEPCDDSFALVDALLADRTNLIEHNPKI-CMEIGCGSGYVITSLILLLKN 98 Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPP 173 E P + D + A + K +GV D + +D S +E G DVIV NPP Sbjct: 99 EVPGVHYLATDTNPIATRVTKETLQAHGVDA--DVICADIASVLEKRLSGSVDVIVVNPP 156 Query: 174 YIES 177 Y+ + Sbjct: 157 YVPT 160 >gi|257482977|ref|ZP_05637018.1| hypothetical protein PsyrptA_06961 [Pseudomonas syringae pv. tabaci ATCC 11528] gi|330891351|gb|EGH24012.1| SAM-dependent methyltransferase [Pseudomonas syringae pv. mori str. 301020] gi|330985922|gb|EGH84025.1| SAM-dependent methyltransferase [Pseudomonas syringae pv. lachrymans str. M301315] gi|331011782|gb|EGH91838.1| SAM-dependent methyltransferase [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 398 Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust. Identities = 33/113 (29%), Positives = 54/113 (47%), Gaps = 30/113 (26%) Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPP-YIESVI 179 VD S AL+ + NA NG +E+ ++ D F +++ L FDVIV++PP +I+ Sbjct: 249 VDASSFALDGVERNAALNGFAEKMTCIEGDVFEALKELKAGEERFDVIVADPPAFIK--- 305 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL-----CSVEI 227 R D + +G YR + + R L+KDG+ CS+ + Sbjct: 306 --------RKKDMK-------NGEGAYRRLNEQAMRLLSKDGILVSASCSMHL 343 >gi|220922373|ref|YP_002497675.1| Cyclopropane-fatty-acyl-phospholipid synthase [Methylobacterium nodulans ORS 2060] gi|219946980|gb|ACL57372.1| Cyclopropane-fatty-acyl-phospholipid synthase [Methylobacterium nodulans ORS 2060] Length = 420 Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust. Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 1/71 (1%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+LD+G G G++ L L + G+ +S K L A++ A G+++R D F Sbjct: 180 RVLDIGCGWGSLALYLAAVAGCDDVRGITLSSKQLARARAQAEVQGLADRVRFALED-FR 238 Query: 160 SVEGLFDVIVS 170 +G FD IVS Sbjct: 239 RTQGTFDRIVS 249 >gi|150008602|ref|YP_001303345.1| ubiquinone/menaquinone biosynthesis methyltransferase [Parabacteroides distasonis ATCC 8503] gi|255014400|ref|ZP_05286526.1| ubiquinone/menaquinone biosynthesis methyltransferase [Bacteroides sp. 2_1_7] gi|298376132|ref|ZP_06986088.1| ubiquinone/menaquinone biosynthesis methyltransferase UbiE [Bacteroides sp. 3_1_19] gi|301309500|ref|ZP_07215442.1| ubiquinone/menaquinone biosynthesis methyltransferase UbiE [Bacteroides sp. 20_3] gi|149937026|gb|ABR43723.1| ubiquinone/menaquinone biosynthesis methyltransferase [Parabacteroides distasonis ATCC 8503] gi|298267169|gb|EFI08826.1| ubiquinone/menaquinone biosynthesis methyltransferase UbiE [Bacteroides sp. 3_1_19] gi|300832589|gb|EFK63217.1| ubiquinone/menaquinone biosynthesis methyltransferase UbiE [Bacteroides sp. 20_3] Length = 247 Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust. Identities = 29/110 (26%), Positives = 49/110 (44%), Gaps = 11/110 (10%) Query: 72 FEPRPETELLVDSALAFSLPRIEKRDVV---------RILDLGTGTGAVCLALLKESPFF 122 F+ ET ++ L+F + +I +R + ILD+ TGTG + +++ K+ Sbjct: 26 FDSIAETYDQLNHTLSFGIDKIWRRKGIAFLRPFSPKTILDIATGTGDLAISMYKKLRPD 85 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD--WFSSVEGLFDVIVS 170 VG DIS +E+ + G SE Q D + E FD + + Sbjct: 86 HIVGADISLGMMEVGRKKVAAAGYSEHISFEQQDCTALTYEENSFDAVTA 135 >gi|66047988|ref|YP_237829.1| hypothetical protein Psyr_4764 [Pseudomonas syringae pv. syringae B728a] gi|289672466|ref|ZP_06493356.1| SAM-dependent methyltransferase [Pseudomonas syringae pv. syringae FF5] gi|302188128|ref|ZP_07264801.1| SAM-dependent methyltransferase [Pseudomonas syringae pv. syringae 642] gi|63258695|gb|AAY39791.1| conserved hypothetical protein [Pseudomonas syringae pv. syringae B728a] gi|330970967|gb|EGH71033.1| SAM-dependent methyltransferase [Pseudomonas syringae pv. aceris str. M302273PT] gi|330980022|gb|EGH78288.1| SAM-dependent methyltransferase [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 398 Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust. Identities = 33/113 (29%), Positives = 54/113 (47%), Gaps = 30/113 (26%) Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPP-YIESVI 179 VD S AL+ + NA NG +E+ ++ D F +++ L FDVIV++PP +I+ Sbjct: 249 VDASSFALDGVERNAALNGFAEKMTCIEGDVFEALKELKAAEERFDVIVADPPAFIK--- 305 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL-----CSVEI 227 R D + +G YR + + R L+KDG+ CS+ + Sbjct: 306 --------RKKDMK-------NGEGAYRRLNEQAMRLLSKDGILVSASCSMHL 343 >gi|77359314|ref|YP_338889.1| 50S ribosomal protein L11 methyltransferase [Pseudoalteromonas haloplanktis TAC125] gi|123588623|sp|Q3IIC0|PRMA_PSEHT RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11 Mtase gi|76874225|emb|CAI85446.1| methylation of 50S ribosomal subunit protein L11 (ribosomal protein L11 methyltransferase) [Pseudoalteromonas haloplanktis TAC125] Length = 293 Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust. Identities = 31/111 (27%), Positives = 57/111 (51%), Gaps = 16/111 (14%) Query: 74 PRPET-ELLVDSALAFS----------LPRIEKRDVV--RILDLGTGTGAVCLALLKESP 120 P P+ +L+D LAF L +E +D+ ++D G G+G + +A +K Sbjct: 122 PDPDAVNVLLDPGLAFGTGTHATTALCLKWLESQDLTGKTVVDFGCGSGILGIAAIKLGA 181 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSN 171 + +G+DI +ALE + NA NGV+++ + + + E D++V+N Sbjct: 182 E-RMIGIDIDPQALEASLDNANRNGVADKLEVYLPE--NQPEFSADIVVAN 229 >gi|53713830|ref|YP_099822.1| RNA methyltransferase [Bacteroides fragilis YCH46] gi|60682048|ref|YP_212192.1| putative RNA methyltransferase [Bacteroides fragilis NCTC 9343] gi|253565800|ref|ZP_04843255.1| RNA methyltransferase [Bacteroides sp. 3_2_5] gi|265764175|ref|ZP_06092743.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Bacteroides sp. 2_1_16] gi|52216695|dbj|BAD49288.1| RNA methyltransferase [Bacteroides fragilis YCH46] gi|60493482|emb|CAH08268.1| putative RNA methyltransferase [Bacteroides fragilis NCTC 9343] gi|251946079|gb|EES86486.1| RNA methyltransferase [Bacteroides sp. 3_2_5] gi|263256783|gb|EEZ28129.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Bacteroides sp. 2_1_16] Length = 472 Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust. Identities = 32/115 (27%), Positives = 57/115 (49%), Gaps = 17/115 (14%) Query: 72 FEPRPETELLVDSALAFSLPRIEKRDVV------RILDLGTGTGAVCLALLKESPFFKGV 125 F+ P++ +S A++L ++ RD + DL TGTG + + +++ K + Sbjct: 295 FKVGPKSFYQTNSEQAYNLYKV-ARDFAGLTGDELVYDLYTGTGTIANFVSRQAR--KVI 351 Query: 126 GVDISCKALEIAKSNAVTNGVSERF-------DTLQSDWFSSVEGLFDVIVSNPP 173 G++ +A+E AK NA NG+ D L D+ + G DVI+++PP Sbjct: 352 GIEYVPEAIEDAKVNAEINGIENTLFFAGDMKDILTQDFINQY-GRPDVIITDPP 405 >gi|330723247|gb|AEC45617.1| Type I restriction-modification system methyltransferase subunit [Mycoplasma hyorhinis MCLD] Length = 906 Score = 37.7 bits (86), Expect = 1.4, Method: Composition-based stats. Identities = 35/116 (30%), Positives = 56/116 (48%), Gaps = 21/116 (18%) Query: 77 ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136 E LL+ +AF L + +D ++I D +G+G++ L + + F ++ A EI Sbjct: 222 EISLLMAEIVAFHL---KHKDNIKIYDPTSGSGSLLLNIGEVFQKFNKKKHSVTYYAQEI 278 Query: 137 AKS-------NAVTNGV------SERFDTLQSDW----FSSVEGL-FDVIVSNPPY 174 +S N + +GV + DTL+ DW +S E L D +VSNPPY Sbjct: 279 NESTYKLTKMNLILHGVNVSEIHARNADTLKQDWPIDKINSTEPLRVDSVVSNPPY 334 >gi|322786157|gb|EFZ12762.1| hypothetical protein SINV_00682 [Solenopsis invicta] Length = 280 Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust. Identities = 40/119 (33%), Positives = 56/119 (47%), Gaps = 15/119 (12%) Query: 95 KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154 ++D +R+LDLG G GA +A + K V DIS A NA+ N V ++ Sbjct: 134 RKDAIRMLDLGAGCGATAIAAKLMNGMCKIVANDISKVACVAIAMNAILNNVD-----IE 188 Query: 155 SDWFS----SVEGLFDVI-VSNPPY---IESVIVDCLGLEVRDFDPRISL-DGGIDGLS 204 W + +E L+DVI V + Y I + ++ LG E RI L D G GLS Sbjct: 189 VSWENLLQKPLEDLYDVIFVGDLLYDEEIANTLMTWLG-EAHKRGARIYLGDPGRHGLS 246 >gi|289678355|ref|ZP_06499245.1| ribosomal RNA small subunit methyltransferase C [Pseudomonas syringae pv. syringae FF5] Length = 207 Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust. Identities = 26/105 (24%), Positives = 45/105 (42%), Gaps = 2/105 (1%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 +D A L I+K +LD G G G + A+ + P + + +D+ A ++ Sbjct: 51 LDRGSALLLENIDKLPSGNLLDFGCGAGVLGAAIKRRYPHNEVIMLDVDAFATASSRLTL 110 Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLE 186 NG+ + L D + + I+SNPP+ V D + E Sbjct: 111 AANGLQAQ--VLTGDGIDAAPMGLNTILSNPPFHVGVHTDYMATE 153 >gi|289648508|ref|ZP_06479851.1| SAM-dependent methyltransferase [Pseudomonas syringae pv. aesculi str. 2250] Length = 398 Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust. Identities = 33/113 (29%), Positives = 54/113 (47%), Gaps = 30/113 (26%) Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPP-YIESVI 179 VD S AL+ + NA NG +E+ ++ D F +++ L FDVIV++PP +I+ Sbjct: 249 VDASSFALDGVERNAALNGFAEKMTCIEGDVFEALKELKAGEERFDVIVADPPAFIK--- 305 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL-----CSVEI 227 R D + +G YR + + R L+KDG+ CS+ + Sbjct: 306 --------RKKDMK-------NGEGAYRRLNEQAMRLLSKDGILVSASCSMHL 343 >gi|260891098|ref|ZP_05902361.1| putative methyltransferase [Leptotrichia hofstadii F0254] gi|260859125|gb|EEX73625.1| putative methyltransferase [Leptotrichia hofstadii F0254] Length = 236 Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust. Identities = 19/74 (25%), Positives = 37/74 (50%), Gaps = 1/74 (1%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 IL++G G G + L + + + + V++ E + N N + ++ L + + Sbjct: 67 ILEIGAGQGIMSLLISEIDMVERIIAVEVQKDVYETLEKNIEINNLRQKITPLNEN-IKN 125 Query: 161 VEGLFDVIVSNPPY 174 +EG ++ I SNPPY Sbjct: 126 IEGKYEFIFSNPPY 139 >gi|228984123|ref|ZP_04144309.1| Type I restriction-modification system, M subunit [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228775651|gb|EEM24031.1| Type I restriction-modification system, M subunit [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 530 Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust. Identities = 24/90 (26%), Positives = 41/90 (45%), Gaps = 9/90 (10%) Query: 94 EKRDVVRILDLGTGTGAVCLALLK---ESPFFKGVGVDISCKALEIAKSNAVTNGVSER- 149 E + + + D G+G++ L + K K G +++ +AK N + +GV + Sbjct: 214 EDKKLFSVFDPTMGSGSLMLNIRKYISHPDSVKYHGQELNTTTYNLAKMNLILHGVDKED 273 Query: 150 -----FDTLQSDWFSSVEGLFDVIVSNPPY 174 DTL DW + FD ++ NPPY Sbjct: 274 MRLRNGDTLNKDWPTDEPYTFDSVLMNPPY 303 >gi|261380921|ref|ZP_05985494.1| site-specific DNA-methyltransferase, HsdM subunit [Neisseria subflava NJ9703] gi|284796174|gb|EFC51521.1| site-specific DNA-methyltransferase, HsdM subunit [Neisseria subflava NJ9703] Length = 871 Score = 37.7 bits (86), Expect = 1.4, Method: Composition-based stats. Identities = 29/112 (25%), Positives = 51/112 (45%), Gaps = 17/112 (15%) Query: 77 ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL-------LKESPFFKGVGVDI 129 E LL+ +A ++ R+ + I D +G+G++ + + LK + K ++ Sbjct: 193 EVSLLMSEIIA---DHLKDREEISIYDPTSGSGSLLINIGHSVAKHLKSADSIKYYAQEL 249 Query: 130 SCKALEIAKSNAVTNGV------SERFDTLQSDWFSSVEGLF-DVIVSNPPY 174 + + N V G+ + DTL+ DW E L+ D +VSNPPY Sbjct: 250 KENTYNLTRMNLVMRGILPSNIFTRNADTLEDDWPLEGEPLYLDAVVSNPPY 301 >gi|225076051|ref|ZP_03719250.1| hypothetical protein NEIFLAOT_01083 [Neisseria flavescens NRL30031/H210] gi|224952611|gb|EEG33820.1| hypothetical protein NEIFLAOT_01083 [Neisseria flavescens NRL30031/H210] Length = 871 Score = 37.7 bits (86), Expect = 1.4, Method: Composition-based stats. Identities = 29/112 (25%), Positives = 51/112 (45%), Gaps = 17/112 (15%) Query: 77 ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL-------LKESPFFKGVGVDI 129 E LL+ +A ++ R+ + I D +G+G++ + + LK + K ++ Sbjct: 193 EVSLLMSEIIA---DHLKDREEISIYDPTSGSGSLLINIGHSVAKHLKSADSIKYYAQEL 249 Query: 130 SCKALEIAKSNAVTNGV------SERFDTLQSDWFSSVEGLF-DVIVSNPPY 174 + + N V G+ + DTL+ DW E L+ D +VSNPPY Sbjct: 250 KENTYNLTRMNLVMRGILPSNIFTRNADTLEDDWPLEGEPLYLDAVVSNPPY 301 >gi|222100803|ref|YP_002535371.1| Menaquinone biosynthesis methyltransferase ubiE [Thermotoga neapolitana DSM 4359] gi|221573193|gb|ACM24005.1| Menaquinone biosynthesis methyltransferase ubiE [Thermotoga neapolitana DSM 4359] Length = 223 Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust. Identities = 17/41 (41%), Positives = 27/41 (65%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140 ++LDL TGTG V L +++P + G+D+S + +EIAK Sbjct: 41 KVLDLATGTGDVIKLLKEKAPHLEVTGLDLSLEMMEIAKKK 81 >gi|301163521|emb|CBW23072.1| putative RNA methyltransferase [Bacteroides fragilis 638R] Length = 472 Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust. Identities = 32/115 (27%), Positives = 57/115 (49%), Gaps = 17/115 (14%) Query: 72 FEPRPETELLVDSALAFSLPRIEKRDVV------RILDLGTGTGAVCLALLKESPFFKGV 125 F+ P++ +S A++L ++ RD + DL TGTG + + +++ K + Sbjct: 295 FKVGPKSFYQTNSEQAYNLYKV-ARDFAGLTGDELVYDLYTGTGTIANFVSRQAR--KVI 351 Query: 126 GVDISCKALEIAKSNAVTNGVSERF-------DTLQSDWFSSVEGLFDVIVSNPP 173 G++ +A+E AK NA NG+ D L D+ + G DVI+++PP Sbjct: 352 GIEYVPEAIEDAKVNAEINGIENTLFFAGDMKDILTQDFINQY-GRPDVIITDPP 405 >gi|302802849|ref|XP_002983178.1| hypothetical protein SELMODRAFT_117965 [Selaginella moellendorffii] gi|300148863|gb|EFJ15520.1| hypothetical protein SELMODRAFT_117965 [Selaginella moellendorffii] Length = 188 Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust. Identities = 28/79 (35%), Positives = 39/79 (49%), Gaps = 8/79 (10%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV-SERFDTL----- 153 ILD GTG+G + +A LK VGVDI A+ + SNA N + F+ Sbjct: 62 NILDYGTGSGILAIAALKMG-ASHAVGVDIDPMAVSSSASNATLNALDPHAFEVFIAAAD 120 Query: 154 -QSDWFSSVEGLFDVIVSN 171 + D G+FDV+V+N Sbjct: 121 DKDDPVPHGPGVFDVVVAN 139 >gi|71736452|ref|YP_276895.1| hypothetical protein PSPPH_4795 [Pseudomonas syringae pv. phaseolicola 1448A] gi|71557005|gb|AAZ36216.1| conserved hypothetical protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|320326358|gb|EFW82411.1| SAM-dependent methyltransferase [Pseudomonas syringae pv. glycinea str. B076] gi|320331651|gb|EFW87589.1| SAM-dependent methyltransferase [Pseudomonas syringae pv. glycinea str. race 4] Length = 398 Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust. Identities = 33/113 (29%), Positives = 54/113 (47%), Gaps = 30/113 (26%) Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPP-YIESVI 179 VD S AL+ + NA NG +E+ ++ D F +++ L FDVIV++PP +I+ Sbjct: 249 VDASSFALDGVERNAALNGFAEKMTCIEGDVFEALKELKAGEERFDVIVADPPAFIK--- 305 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL-----CSVEI 227 R D + +G YR + + R L+KDG+ CS+ + Sbjct: 306 --------RKKDMK-------NGEGAYRRLNEQAMRLLSKDGILVSASCSMHL 343 >gi|94984726|ref|YP_604090.1| hypothetical protein Dgeo_0619 [Deinococcus geothermalis DSM 11300] gi|94555007|gb|ABF44921.1| SAM-dependent methyltransferase [Deinococcus geothermalis DSM 11300] Length = 403 Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust. Identities = 20/55 (36%), Positives = 32/55 (58%), Gaps = 4/55 (7%) Query: 125 VGVDISCKALEIAKSNAVTN-GVSERFDTLQSD---WFSSVEGLFDVIVSNPPYI 175 V +DIS AL A+ N N G+ R +T+Q+D W S + FD+++ +PP + Sbjct: 259 VSLDISAHALASAQRNFTLNPGLPARHETVQADVFRWLSQTDREFDLVILDPPSL 313 >gi|330975613|gb|EGH75679.1| ribosomal RNA small subunit methyltransferase C [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 332 Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust. Identities = 26/105 (24%), Positives = 45/105 (42%), Gaps = 2/105 (1%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 +D A L I+K +LD G G G + A+ + P + + +D+ A ++ Sbjct: 176 LDRGSALLLENIDKLPSGNLLDFGCGAGVLGAAIKRRYPHNEVIMLDVDAFATASSRLTL 235 Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLE 186 NG+ + L D + + I+SNPP+ V D + E Sbjct: 236 AANGLQAQ--VLTGDGIDAAPMGLNTILSNPPFHVGVHTDYMATE 278 >gi|319938777|ref|ZP_08013141.1| DNA methyltransferase signature protein [Streptococcus anginosus 1_2_62CV] gi|319811827|gb|EFW08093.1| DNA methyltransferase signature protein [Streptococcus anginosus 1_2_62CV] Length = 248 Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust. Identities = 29/99 (29%), Positives = 50/99 (50%), Gaps = 7/99 (7%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 VDS L P + KR + I+DL G GAV L + + + V+I + ++A+ + Sbjct: 33 VDSVLLSRFPNLPKRGL--IVDLCAGNGAVGLFASTRTK-AQIIAVEIQERLADMAERSI 89 Query: 142 VTNGVSERFDTLQSD---WFSSVEG-LFDVIVSNPPYIE 176 NG++ + +Q D ++G D+I+ NPPY + Sbjct: 90 ELNGLTHQMQVIQDDLKYLTHYIDGSKVDMILCNPPYFK 128 >gi|317179168|dbj|BAJ56956.1| Type I restriction enzyme M protein [Helicobacter pylori F30] Length = 543 Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust. Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 21/96 (21%) Query: 94 EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD--------ISCKALEIAKSNAVTNG 145 E V+I D GTG + +AL + +G D IS K+L++ K N + N Sbjct: 226 EPTQSVKIYDPSAGTGTLLMALAHQ------IGTDSCTLYAQDISQKSLKMLKLNLILND 279 Query: 146 VSERF------DTLQSDWFSS-VEGLFDVIVSNPPY 174 ++ +TL + + S +G D IVSNPP+ Sbjct: 280 LTHSLKYAIEGNTLTNPYHSKECKGKMDYIVSNPPF 315 >gi|312198563|ref|YP_004018624.1| methyltransferase type 11 [Frankia sp. EuI1c] gi|311229899|gb|ADP82754.1| Methyltransferase type 11 [Frankia sp. EuI1c] Length = 531 Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust. Identities = 32/108 (29%), Positives = 45/108 (41%), Gaps = 11/108 (10%) Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL-KESPFF 122 RL S EP TE + S + R R LD+G G G V + L + P Sbjct: 269 RLAAQSRVLEP--GTEAFLTS--------LGVRPGWRCLDVGCGHGQVSILLAGRVRPGG 318 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170 + VG+D S +L +A+ NA G + + W G FD+ S Sbjct: 319 QVVGIDASPASLAVARHNATRVGARIAWMNADASWLPVARGGFDLAYS 366 >gi|258623082|ref|ZP_05718095.1| Ribosomal RNA small subunit methyltransferase C [Vibrio mimicus VM573] gi|258584695|gb|EEW09431.1| Ribosomal RNA small subunit methyltransferase C [Vibrio mimicus VM573] Length = 340 Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust. Identities = 21/75 (28%), Positives = 38/75 (50%), Gaps = 2/75 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 +++D+G G G + + K +P + DIS A+ ++ + N + R SD S Sbjct: 203 KVIDIGCGAGVLGCVMAKLNPNIELEMTDISALAIRSSQETLLANHL--RGTVYPSDMLS 260 Query: 160 SVEGLFDVIVSNPPY 174 + +D IV+NPP+ Sbjct: 261 DTKHKYDYIVTNPPF 275 >gi|238917477|ref|YP_002930994.1| hypothetical protein EUBELI_01555 [Eubacterium eligens ATCC 27750] gi|238872837|gb|ACR72547.1| Hypothetical protein EUBELI_01555 [Eubacterium eligens ATCC 27750] Length = 470 Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust. Identities = 31/78 (39%), Positives = 43/78 (55%), Gaps = 10/78 (12%) Query: 101 ILDLGTGTGAVCLALLKESPFF-KGVGVDISCKALEIAKSNAVTNGVSE-RF---DTLQS 155 I DL TGTG + L SP K +GV+I +A+E AK NA NG++ F D L++ Sbjct: 330 IYDLYTGTGTIAQML---SPVASKVIGVEIVAEAVEAAKKNAAQNGLTNCEFIADDVLKA 386 Query: 156 DWFSSVEGLFDVIVSNPP 173 ++E D IV +PP Sbjct: 387 --LDNIEIKPDFIVLDPP 402 >gi|237802338|ref|ZP_04590799.1| SAM-dependent methyltransferase [Pseudomonas syringae pv. oryzae str. 1_6] gi|331025195|gb|EGI05251.1| SAM-dependent methyltransferase [Pseudomonas syringae pv. oryzae str. 1_6] Length = 398 Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust. Identities = 33/113 (29%), Positives = 54/113 (47%), Gaps = 30/113 (26%) Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPP-YIESVI 179 VD S AL+ + NA NG +E+ ++ D F +++ L FDVIV++PP +I+ Sbjct: 249 VDASSFALDGVERNAALNGFAEKMTCIEGDVFEALKELKAGEERFDVIVADPPAFIK--- 305 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL-----CSVEI 227 R D + +G YR + + R L+KDG+ CS+ + Sbjct: 306 --------RKKDMK-------NGEGAYRRLNEQAMRLLSKDGILVSASCSMHL 343 >gi|228994625|ref|ZP_04154449.1| Type I restriction-modification system, M subunit [Bacillus pseudomycoides DSM 12442] gi|228765110|gb|EEM13840.1| Type I restriction-modification system, M subunit [Bacillus pseudomycoides DSM 12442] Length = 517 Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust. Identities = 22/84 (26%), Positives = 42/84 (50%), Gaps = 4/84 (4%) Query: 95 KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS-ERFDTL 153 K ++ + D G+G++ L + KE+ + G + +A+ N + + + +RFD Sbjct: 224 KTEIKDVYDGTCGSGSLLLRVGKEAKVYNYYGQEKVSTTYNLARMNMLLHDIPYQRFDIK 283 Query: 154 QSDWFSSVEGL---FDVIVSNPPY 174 +D + L F+ IV+NPPY Sbjct: 284 NADTLEEPQHLDKRFEAIVANPPY 307 >gi|209964877|ref|YP_002297792.1| cyclopropane-fatty-acyl-phospholipid synthase [Rhodospirillum centenum SW] gi|209958343|gb|ACI98979.1| cyclopropane-fatty-acyl-phospholipid synthase [Rhodospirillum centenum SW] Length = 427 Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust. Identities = 25/71 (35%), Positives = 40/71 (56%), Gaps = 2/71 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+LD+G G G + L L + + + GV +S + L IA+ A G+S+R +D + Sbjct: 193 RVLDIGCGWGGLALHLARAAD-VEVTGVTLSQEQLAIARRRAEEAGLSDRVRFELAD-YR 250 Query: 160 SVEGLFDVIVS 170 ++G FD IVS Sbjct: 251 RLKGRFDRIVS 261 >gi|113866085|ref|YP_724574.1| SAM-dependent methyltransferase [Ralstonia eutropha H16] gi|113524861|emb|CAJ91206.1| SAM-dependent methyltransferase [Ralstonia eutropha H16] Length = 296 Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust. Identities = 29/97 (29%), Positives = 45/97 (46%), Gaps = 9/97 (9%) Query: 75 RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE-SPFFKGVGVDISCKA 133 RP LVD+ + K +LD+G GTG+ +AL ++ + G+DIS Sbjct: 38 RPLEGRLVDT--------VGKTSAQHVLDVGCGTGSTTIALARKLGAQGRCTGIDISEPM 89 Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170 L A++ A NG + F + ++ FD IVS Sbjct: 90 LAAARARAQHNGSTASFIRADAQDYAFAPASFDSIVS 126 >gi|325087789|gb|EGC41099.1| S-adenosylmethionine-dependent methyltransferase [Ajellomyces capsulatus H88] Length = 343 Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust. Identities = 22/41 (53%), Positives = 30/41 (73%), Gaps = 4/41 (9%) Query: 101 ILDLGTGTGAVCLALLKESPFFKG---VGVDISCKALEIAK 138 ILDLGTG G++ LALL++ F G VGVD S K++E+A+ Sbjct: 168 ILDLGTGNGSM-LALLRDEGGFTGGQMVGVDYSSKSIELAR 207 >gi|315045007|ref|XP_003171879.1| mitochondrial N(5)-glutamine methyltransferase MTQ1 [Arthroderma gypseum CBS 118893] gi|311344222|gb|EFR03425.1| mitochondrial N(5)-glutamine methyltransferase MTQ1 [Arthroderma gypseum CBS 118893] Length = 370 Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust. Identities = 47/177 (26%), Positives = 69/177 (38%), Gaps = 36/177 (20%) Query: 33 RQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVD--SALAFSL 90 RQR L + + + + + ILG + F + + PR +TE + + Sbjct: 56 RQR--LQSLVCQRAAGKPLQYILGDQPFGELTILCREGVLIPRLDTESYTTRIAQRLLAE 113 Query: 91 PRIEKRDVVRILDLGTGTGAVCL---ALLKES-PFFKGVGVDISCKALEIAKSN---AVT 143 R +RI+D+ TGTG + L +LL S P +GVDIS AL +AK N + Sbjct: 114 NRHNPTRSLRIIDICTGTGCIPLLLHSLLAPSIPTLSIIGVDISSTALSLAKKNLEYNIG 173 Query: 144 NGV-------------------------SERFDTLQSDWFSSVEGLFDVIVSNPPYI 175 NG TL S D+++SNPPYI Sbjct: 174 NGSLLSRARDEVRFVHADILDPCSLKPDGSELGTLLSRSGQDHSDRLDLLISNPPYI 230 >gi|302557272|ref|ZP_07309614.1| methyltransferase domain-containing protein [Streptomyces griseoflavus Tu4000] gi|302474890|gb|EFL37983.1| methyltransferase domain-containing protein [Streptomyces griseoflavus Tu4000] Length = 303 Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust. Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 1/66 (1%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 I+D G+G G + + P + V VD S LE A+ A G ++RFDT+ + S Sbjct: 63 IVDAGSGPGVIACLFAETFPGARVVAVDASGPLLERARDRAGRQGAADRFDTVTGE-LPS 121 Query: 161 VEGLFD 166 V G D Sbjct: 122 VLGELD 127 >gi|256822586|ref|YP_003146549.1| type 12 methyltransferase [Kangiella koreensis DSM 16069] gi|256796125|gb|ACV26781.1| Methyltransferase type 12 [Kangiella koreensis DSM 16069] Length = 260 Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust. Identities = 36/134 (26%), Positives = 56/134 (41%), Gaps = 30/134 (22%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ---SD 156 R+LDL G G ++L K + G+GVD+ ++ AK +A++ V + + ++ +D Sbjct: 56 RVLDLCCGKGVTLISLAKHYGW-HGIGVDVVEDFIQQAKIDAISQRVKSQAEFVRQNMAD 114 Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216 + LFDVIV D LG V D +S+H Sbjct: 115 FLKQNTELFDVIVF------PACTDVLGDRVESLDI--------------------LSKH 148 Query: 217 LNKDGLCSVEIGYN 230 +N DG VE Y Sbjct: 149 INDDGFILVESDYK 162 >gi|187779697|ref|ZP_02996170.1| hypothetical protein CLOSPO_03293 [Clostridium sporogenes ATCC 15579] gi|187773322|gb|EDU37124.1| hypothetical protein CLOSPO_03293 [Clostridium sporogenes ATCC 15579] Length = 704 Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust. Identities = 54/200 (27%), Positives = 83/200 (41%), Gaps = 36/200 (18%) Query: 24 VDP------DSVLDDRQRF---FLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEP 74 VDP + VLDD L N + S+ E IH+ F + + F P Sbjct: 142 VDPRINLSVEPVLDDNGEVKLPALENHTMGSIFEELIHK------FNEENNEQAGEHFTP 195 Query: 75 RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL-------ALLKESPFFKGV-- 125 R EL+ D + +I K + D GTG + L KE+ + Sbjct: 196 RHVVELMADITFLPVVDKI-KDGSYLVYDGACGTGGMLTIAEKRLQELAKENNKQISINL 254 Query: 126 -GVDISCKALEIAKSNAVTNGVSERFD------TLQSDWFSSVEGLFDVIVSNPPYIESV 178 G +I+ + I K++ + G ++ D TL +D FS+ FD ++SNPPY +S Sbjct: 255 YGQEINPETYAITKADMLLKGEGKQADNIAYGSTLSNDKFSTTN--FDFMLSNPPYGKSW 312 Query: 179 IVDC--LGLEVRDFDPRISL 196 D LG + DPR ++ Sbjct: 313 KTDLNKLGGKEHITDPRFAV 332 >gi|159026259|emb|CAO86408.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 219 Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust. Identities = 20/77 (25%), Positives = 42/77 (54%), Gaps = 6/77 (7%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW- 157 R+LD+GTGT + + + + P ++ + +D++ LEI + N ++ E+ + D Sbjct: 43 ARVLDVGTGTARIPIMISQLRPQWQIIAIDLADSMLEIGQKNILSANCQEKIKLEKVDGK 102 Query: 158 ---FSSVEGLFDVIVSN 171 + S + FD+++SN Sbjct: 103 NLPYQSEQ--FDLVISN 117 >gi|11497821|ref|NP_069043.1| hypothetical protein AF0205 [Archaeoglobus fulgidus DSM 4304] gi|2650438|gb|AAB91027.1| conserved hypothetical protein [Archaeoglobus fulgidus DSM 4304] Length = 204 Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust. Identities = 28/76 (36%), Positives = 39/76 (51%), Gaps = 8/76 (10%) Query: 101 ILDLGTGTG--AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 I+DLG GTG A+ +LL VGVD+ +AL+IA+ NA GV F + F Sbjct: 49 IIDLGCGTGILAIACSLLGHY----SVGVDLDVEALKIARDNAAELGVEADFVRSEVSKF 104 Query: 159 SSVEGLFDVIVSNPPY 174 + V+ NPP+ Sbjct: 105 RCKRKVTTVM--NPPF 118 >gi|119501757|ref|XP_001267635.1| O-methyltransferase, putative [Neosartorya fischeri NRRL 181] gi|119415801|gb|EAW25738.1| O-methyltransferase, putative [Neosartorya fischeri NRRL 181] Length = 236 Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust. Identities = 40/133 (30%), Positives = 63/133 (47%), Gaps = 10/133 (7%) Query: 100 RILDLGTGTGAVCLALLKESPFFKG---VGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 R+L+LGT TG LA L E+ G V VD+S K L+IA+ +G ++R ++ D Sbjct: 70 RVLELGTFTGVSALA-LHEATRQTGAEIVTVDLSEKYLKIAEDAFKRHGATDRIRVIKGD 128 Query: 157 WFS---SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL---DGGIDGLSHYRTIA 210 +EG FD+I + E L L+ + PR +L D ++GL R+I+ Sbjct: 129 CLKVLHELEGQFDLIYIDAEEDEYEAYIRLILDHKLLSPRGALIVDDTLLEGLVFDRSIS 188 Query: 211 DGVSRHLNKDGLC 223 + + L Sbjct: 189 KNFPAEIQEPYLA 201 >gi|332531769|ref|ZP_08407654.1| ribosomal protein L11 methyltransferase [Pseudoalteromonas haloplanktis ANT/505] gi|332038745|gb|EGI75187.1| ribosomal protein L11 methyltransferase [Pseudoalteromonas haloplanktis ANT/505] Length = 293 Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust. Identities = 31/111 (27%), Positives = 57/111 (51%), Gaps = 16/111 (14%) Query: 74 PRPET-ELLVDSALAFS----------LPRIEKRDVV--RILDLGTGTGAVCLALLKESP 120 P P+ +L+D LAF L +E +D+ ++D G G+G + +A +K Sbjct: 122 PDPDAVNVLLDPGLAFGTGTHATTALCLKWLESQDLTGKTVVDFGCGSGILGIAAIKLGA 181 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSN 171 + +G+DI +ALE + NA NGV+++ + + + E D++V+N Sbjct: 182 E-RMIGIDIDPQALEASLDNANRNGVADKLEVYLPE--NQPEFSADIVVAN 229 >gi|330951060|gb|EGH51320.1| ribosomal RNA small subunit methyltransferase C [Pseudomonas syringae Cit 7] Length = 198 Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust. Identities = 26/105 (24%), Positives = 45/105 (42%), Gaps = 2/105 (1%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 +D A L I+K +LD G G G + A+ + P + + +D+ A ++ Sbjct: 42 LDRGSALLLENIDKLPSGNLLDFGCGAGVLGAAIKRRYPHNEVIMLDVDAFATASSRLTL 101 Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLE 186 NG+ + L D + + I+SNPP+ V D + E Sbjct: 102 AANGLQAQ--VLTGDGIDAAPMGLNTILSNPPFHVGVHTDYMATE 144 >gi|325095018|gb|EGC48328.1| conserved hypothetical protein [Ajellomyces capsulatus H88] Length = 505 Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust. Identities = 50/218 (22%), Positives = 80/218 (36%), Gaps = 59/218 (27%) Query: 38 LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETE---LLVDSALAFSLPRIE 94 L + R + + ILG + F + + PRPETE V + L L Sbjct: 88 LREMVRRRARGVPLQYILGDQPFGELEMLCRRGVLIPRPETESYTTRVANLLLSKLAPTR 147 Query: 95 KRDV-------------VRILDLGTGTGAVCLALLKES----PFFKGVGVDISCKALEIA 137 ++D+ +RI+DL TGTG + L L P + VDIS +AL++A Sbjct: 148 QKDLTHRDECKCEHLPTLRIVDLCTGTGCIPLLLHSLLSPVFPKLQICAVDISTRALKLA 207 Query: 138 KSN--------AVTNGVSERFDTLQSDWFSSVEGL------------------------- 164 + N ++ E ++ D S + L Sbjct: 208 RENLKHNIALGMLSERAREEVSFVKGDVLSGLSELSGLCSSSVTPASKTAAAAAAAAEPE 267 Query: 165 ----FDVIVSNPPYIESV--IVDCLGLEVRDFDPRISL 196 +++SNPPYI VR ++PR++L Sbjct: 268 INPVITILLSNPPYISPAQFANGTTARSVRGYEPRLAL 305 >gi|312866463|ref|ZP_07726681.1| conserved hypothetical protein [Streptococcus downei F0415] gi|311098157|gb|EFQ56383.1| conserved hypothetical protein [Streptococcus downei F0415] Length = 384 Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust. Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 13/64 (20%) Query: 125 VGVDISCKALEIAKSNAVTNGVSE-------RFDTLQSDWFSSVEGLFDVIVSNPPYIES 177 +G DI + +EIAK+NA+ G+++ R L++D + G VIVSNPPY E Sbjct: 260 MGSDIDARMIEIAKNNALEAGLADVIKLKQMRLQDLKTD---KING---VIVSNPPYGER 313 Query: 178 VIVD 181 ++ D Sbjct: 314 LLDD 317 >gi|304388400|ref|ZP_07370509.1| ribosomal protein L11 methyltransferase [Neisseria meningitidis ATCC 13091] gi|304337612|gb|EFM03772.1| ribosomal protein L11 methyltransferase [Neisseria meningitidis ATCC 13091] Length = 295 Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust. Identities = 27/74 (36%), Positives = 38/74 (51%), Gaps = 11/74 (14%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDW 157 +LD G G+G + +A LK VGVDI +A+ + NA N V +F D L Sbjct: 167 VLDYGCGSGILTIAALKLGA-GSAVGVDIDEQAVRAGRDNAAQNNVDAQFFLPDGLP--- 222 Query: 158 FSSVEGLFDVIVSN 171 +G FDV+V+N Sbjct: 223 ----QGQFDVVVAN 232 >gi|229088748|ref|ZP_04220305.1| Type I restriction-modification system, M subunit [Bacillus cereus Rock3-44] gi|228694573|gb|EEL47992.1| Type I restriction-modification system, M subunit [Bacillus cereus Rock3-44] Length = 512 Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust. Identities = 23/90 (25%), Positives = 41/90 (45%), Gaps = 9/90 (10%) Query: 94 EKRDVVRILDLGTGTGAVCL---ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER- 149 E + + + D G+G++ L + + K G +++ +AK N + +GV + Sbjct: 196 EDKKLFSVFDPTMGSGSLMLNIRSYINHPDSVKYHGQELNTTTYNLAKMNLILHGVDKED 255 Query: 150 -----FDTLQSDWFSSVEGLFDVIVSNPPY 174 DTL DW + FD ++ NPPY Sbjct: 256 MRLRNGDTLNKDWPTDEPYTFDSVLMNPPY 285 >gi|297582533|ref|YP_003698313.1| type I restriction-modification system, M subunit [Bacillus selenitireducens MLS10] gi|297140990|gb|ADH97747.1| type I restriction-modification system, M subunit [Bacillus selenitireducens MLS10] Length = 531 Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust. Identities = 25/90 (27%), Positives = 39/90 (43%), Gaps = 9/90 (10%) Query: 94 EKRDVVRILDLGTGTGAVCLAL---LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150 E + + D G+G++ L + L K G +++ +AK N + +GV Sbjct: 215 EDKKWFSVFDPTMGSGSLMLNVRNYLNHPDKVKYHGQELNTTTFNLAKMNLILHGVDPEE 274 Query: 151 ------DTLQSDWFSSVEGLFDVIVSNPPY 174 DTL DW + FD +V NPPY Sbjct: 275 MRVRNGDTLNKDWPTDEPYTFDSVVMNPPY 304 >gi|313669084|ref|YP_004049368.1| ribosomal protein L11 methyltransferase [Neisseria lactamica ST-640] gi|313006546|emb|CBN88010.1| putative ribosomal protein L11 methyltransferase [Neisseria lactamica 020-06] Length = 295 Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust. Identities = 27/74 (36%), Positives = 38/74 (51%), Gaps = 11/74 (14%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDW 157 +LD G G+G + +A LK VGVDI +A+ + NA N V +F D L Sbjct: 167 VLDYGCGSGILTIAALKLGA-GSAVGVDIDEQAVRAGRDNAAQNNVDAQFFLPDGLP--- 222 Query: 158 FSSVEGLFDVIVSN 171 +G FDV+V+N Sbjct: 223 ----QGQFDVVVAN 232 >gi|282856081|ref|ZP_06265367.1| SAM-dependent methyltransferase [Pyramidobacter piscolens W5455] gi|282586102|gb|EFB91384.1| SAM-dependent methyltransferase [Pyramidobacter piscolens W5455] Length = 409 Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust. Identities = 25/80 (31%), Positives = 39/80 (48%), Gaps = 8/80 (10%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF-- 158 +LD T TG+ L ++ VD+S ALE+A+ NA NG + D + +D F Sbjct: 237 VLDCFTHTGSFALNAVRGGAAHV-TAVDVSAGALEMARHNAALNGCLGKMDFIAADVFDL 295 Query: 159 -----SSVEGLFDVIVSNPP 173 S G + +I+ +PP Sbjct: 296 LSDMASRGRGEYGMIILDPP 315 >gi|260775445|ref|ZP_05884342.1| ribosomal RNA small subunit methyltransferase C [Vibrio coralliilyticus ATCC BAA-450] gi|260608626|gb|EEX34791.1| ribosomal RNA small subunit methyltransferase C [Vibrio coralliilyticus ATCC BAA-450] Length = 357 Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust. Identities = 28/97 (28%), Positives = 45/97 (46%), Gaps = 11/97 (11%) Query: 78 TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137 ++LL+D+ A S ++LD G G G + + + K DIS A+E + Sbjct: 207 SQLLLDTLPALS---------GKVLDFGCGAGVIGSVMATLNAEIKLEMCDISALAVESS 257 Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174 K+ NG+ R SD +S + I+SNPP+ Sbjct: 258 KATLEANGLKGR--VFASDIYSDTSQDYQFIISNPPF 292 >gi|257056628|ref|YP_003134460.1| ubiquinone/menaquinone biosynthesis methylase [Saccharomonospora viridis DSM 43017] gi|256586500|gb|ACU97633.1| methylase involved in ubiquinone/menaquinone biosynthesis [Saccharomonospora viridis DSM 43017] Length = 244 Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust. Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 2/72 (2%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 +R+LD G GTGA ALL +P + V +D S + L A+ + V RF + Sbjct: 55 LRLLDAGCGTGASTAALLAVAPRAEIVAIDASARMLAEARRKPWPDSV--RFVHTSVEEL 112 Query: 159 SSVEGLFDVIVS 170 + V G FD I++ Sbjct: 113 AGVSGPFDGILA 124 >gi|229083613|ref|ZP_04215941.1| Uncharacterized RNA methyltransferase [Bacillus cereus Rock3-44] gi|228699703|gb|EEL52360.1| Uncharacterized RNA methyltransferase [Bacillus cereus Rock3-44] Length = 465 Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust. Identities = 45/185 (24%), Positives = 90/185 (48%), Gaps = 34/185 (18%) Query: 10 FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILG-----------WR 58 F+ R L + + I++ + +F +IV+++ + + I G Sbjct: 226 FITRTAELPNKEAIIEEIAT-----KFPEVKSIVQNVNTKRTNVIFGDTTTVLYGSEYIY 280 Query: 59 DFY-NVRLTLSSDTF-EPRPE-TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL 115 DF +++ +S+ +F + PE T++L D AL ++ +++ + V +D G G++ L L Sbjct: 281 DFIGDIKFAISARSFYQVNPEQTKVLYDKALEYA--KLDGNETV--IDAYCGIGSISLFL 336 Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVSE------RFDTLQSDWFSSVEGLF-DVI 168 +++ K GV+I +A+E AK NA N ++ + + +W+ EG+ D I Sbjct: 337 AQKAK--KVYGVEIVPEAIEDAKRNAELNNMTNAEFAVGEAEVVIPNWYK--EGIIADTI 392 Query: 169 VSNPP 173 V +PP Sbjct: 393 VVDPP 397 >gi|242824194|ref|XP_002488209.1| n6-DNA-methyltransferase, putative [Talaromyces stipitatus ATCC 10500] gi|218713130|gb|EED12555.1| n6-DNA-methyltransferase, putative [Talaromyces stipitatus ATCC 10500] Length = 361 Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust. Identities = 52/186 (27%), Positives = 79/186 (42%), Gaps = 43/186 (23%) Query: 47 KHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLV----DSAL-AFSLPRIEKRDVVRI 101 K + + ILG + F ++ + PR ETE D L A S + K +RI Sbjct: 78 KGKPLQYILGDQPFGDLDILCRKGVLIPRGETESFTFHTRDVILEAHSAKYLGKS--LRI 135 Query: 102 LDLGTGTGAVCLALLKESPF-FKG---VGVDISCKALEIAKSNAVTN------------- 144 LDL +G+G + L L FK VGVD+ +A+ +++ N + N Sbjct: 136 LDLCSGSGCISLLLHSLLASHFKDLTIVGVDVDPRAISLSQKNKLHNIRRGLLSPRAQNE 195 Query: 145 --------------GVSERFDTLQSDWF-SSVEGLFDVIVSNPPYIESVIVDCLGL---E 186 G DTLQ + S+ + +DV++SNPPYI + C G Sbjct: 196 VCFLKADILDSIESGKRSFLDTLQPHFPGSNTQSTWDVLISNPPYISTSNF-CNGTTSRS 254 Query: 187 VRDFDP 192 VR ++P Sbjct: 255 VRKYEP 260 >gi|187736397|ref|YP_001878509.1| type I restriction-modification system, M subunit [Akkermansia muciniphila ATCC BAA-835] gi|187426449|gb|ACD05728.1| type I restriction-modification system, M subunit [Akkermansia muciniphila ATCC BAA-835] Length = 853 Score = 37.7 bits (86), Expect = 1.5, Method: Composition-based stats. Identities = 43/171 (25%), Positives = 75/171 (43%), Gaps = 31/171 (18%) Query: 77 ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136 E LL+ +A L + R ++I D +G+G++ + + K + G G +I A E+ Sbjct: 192 EVSLLMSEIVAAHL---KDRQQIKIYDPTSGSGSLLINIGKCVARYMGGGDNIKYYAQEL 248 Query: 137 AKS-------NAVTNG------VSERFDTLQSDW--------FSSVEGLF-DVIVSNPPY 174 ++ N V G V+ DTL+ DW ++ + L+ D +VSNPPY Sbjct: 249 KENTYNLTRMNLVMRGILPNNIVTRNGDTLEEDWPYFDDNDPVNTYDPLYVDAVVSNPPY 308 Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225 +S ++ DPR G + Y + + HL DG+ ++ Sbjct: 309 SQS-----WNPADKESDPRYRFGLAPKGKADYAFLLHDL-YHLKPDGIMTI 353 >gi|158422529|ref|YP_001523821.1| putative O-methyltransferase [Azorhizobium caulinodans ORS 571] gi|158329418|dbj|BAF86903.1| putative O-methyltransferase [Azorhizobium caulinodans ORS 571] Length = 235 Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust. Identities = 23/84 (27%), Positives = 40/84 (47%), Gaps = 9/84 (10%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 RI+DLG G G LA+L V++ +A+ NA NG+S+R +++D + Sbjct: 28 RIVDLGAGVGTAGLAVLVRLREASAHLVELDPATAALARQNAAGNGMSDRCAIVEADVRT 87 Query: 160 ---------SVEGLFDVIVSNPPY 174 D++++NPP+ Sbjct: 88 LGKPAGPAEPAAQAADLVIANPPF 111 >gi|126434842|ref|YP_001070533.1| N-6 DNA methylase [Mycobacterium sp. JLS] gi|126234642|gb|ABN98042.1| N-6 DNA methylase [Mycobacterium sp. JLS] Length = 316 Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust. Identities = 38/128 (29%), Positives = 57/128 (44%), Gaps = 13/128 (10%) Query: 58 RDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR-ILDLGTGTGAVCLA-- 114 R F + D F PR L+VD + K VR I D GTG + Sbjct: 161 RKFAESNNAQAGDHFTPREVIALMVDILFHAQDDALTKPGTVRTIYDPAAGTGGMLSTAH 220 Query: 115 --LLKESPFFKGV--GVDISCKALEIAKSNAVTNG--VSERF--DTLQSDWFSSVEGLFD 166 L++ +P + V G DI+ ++ + KS+ + G V + DTL D F + FD Sbjct: 221 DHLIEMNPKARPVLYGQDINPRSYAMCKSDMIVKGQDVDNIYLGDTLTDDGFRT--KTFD 278 Query: 167 VIVSNPPY 174 ++SNPP+ Sbjct: 279 FLLSNPPF 286 >gi|325201498|gb|ADY96952.1| ribosomal protein L11 methyltransferase [Neisseria meningitidis M01-240149] Length = 295 Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust. Identities = 27/74 (36%), Positives = 38/74 (51%), Gaps = 11/74 (14%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDW 157 +LD G G+G + +A LK VGVDI +A+ + NA N V +F D L Sbjct: 167 VLDYGCGSGILTIAALKLGA-GSAVGVDIDEQAVRAGRDNAAQNNVDAQFFLPDGLP--- 222 Query: 158 FSSVEGLFDVIVSN 171 +G FDV+V+N Sbjct: 223 ----QGQFDVVVAN 232 >gi|325953669|ref|YP_004237329.1| rRNA (guanine-N(2)-)-methyltransferase [Weeksella virosa DSM 16922] gi|323436287|gb|ADX66751.1| rRNA (guanine-N(2)-)-methyltransferase [Weeksella virosa DSM 16922] Length = 383 Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust. Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 8/82 (9%) Query: 119 SPF-FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDV-IVSNPPYIE 176 PF +K VG D S ++IA+ N ++ + + + D+F+S + LF V +V NPPY E Sbjct: 250 KPFDYKIVGYDNSPMMVKIAEQNIISADLVDLIEVKHQDFFTSRKELFPVLLVFNPPYDE 309 Query: 177 ------SVIVDCLGLEVRDFDP 192 + +G +++ F P Sbjct: 310 RIENDNQIFYKQIGDQLKKFYP 331 >gi|290476530|ref|YP_003469435.1| 16S RNA m2G1207 methylase [Xenorhabdus bovienii SS-2004] gi|289175868|emb|CBJ82671.1| 16S RNA m2G1207 methylase [Xenorhabdus bovienii SS-2004] Length = 337 Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust. Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 2/74 (2%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LD+ G G + L K++P D++ A +K+ N + + + S+ +S+ Sbjct: 200 LLDIACGAGVLAAVLGKKNPELTLTLSDVNAAATISSKATLKANKLEG--NVITSNVYSA 257 Query: 161 VEGLFDVIVSNPPY 174 +E FD I+SNPP+ Sbjct: 258 IEEKFDWIISNPPF 271 >gi|282852112|ref|ZP_06261470.1| ribosomal protein L11 methyltransferase [Lactobacillus gasseri 224-1] gi|282556872|gb|EFB62476.1| ribosomal protein L11 methyltransferase [Lactobacillus gasseri 224-1] Length = 226 Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust. Identities = 27/102 (26%), Positives = 53/102 (51%), Gaps = 8/102 (7%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 + +LD+GTG+G + +A K +G DIS +A+ AK N N V+ + +++ Sbjct: 90 MSVLDIGTGSGILAIAASKLGASHV-LGTDISDEAVTAAKENIALNDVN-NINVRKANLL 147 Query: 159 SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200 ++ +D+IV+N ++ D L + D D ++ +G + Sbjct: 148 KDIDDKYDLIVAN------ILADILLELIPDLDSHLNKEGKV 183 >gi|239981073|ref|ZP_04703597.1| transferase [Streptomyces albus J1074] gi|291452940|ref|ZP_06592330.1| rRNA or tRNA methyltransferase [Streptomyces albus J1074] gi|291355889|gb|EFE82791.1| rRNA or tRNA methyltransferase [Streptomyces albus J1074] Length = 481 Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust. Identities = 38/123 (30%), Positives = 53/123 (43%), Gaps = 15/123 (12%) Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 LDLGTG+G AL + D++ +AL +G E + L+ F V Sbjct: 139 LDLGTGSG--IQALHASVDATRVTATDLNPRALSFTALTLALSGAPE-AELLEGSLFEPV 195 Query: 162 EG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220 +G +D+IVSNPP+ VI L R DGG+ G RT+ LN+ Sbjct: 196 DGNRYDLIVSNPPF---VISPGARLTYR--------DGGMSGDDLCRTLVQQAGDRLNEG 244 Query: 221 GLC 223 G Sbjct: 245 GYA 247 >gi|229512706|ref|ZP_04402174.1| type I restriction-modification system DNA-methyltransferase subunit M [Vibrio cholerae TMA 21] gi|229350216|gb|EEO15168.1| type I restriction-modification system DNA-methyltransferase subunit M [Vibrio cholerae TMA 21] Length = 523 Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust. Identities = 26/97 (26%), Positives = 48/97 (49%), Gaps = 6/97 (6%) Query: 84 SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES--PFFKGVGVDISCKALEIAKSNA 141 S L L ++ ++ + D G+G++ L + KE+ P K G + + +A+ N Sbjct: 209 SKLLAKLVTLDNPNIKSVYDPTCGSGSLLLRVAKEANNPDIKYYGQERNPSTYNLARMNM 268 Query: 142 VTNGVS-ERFDTLQSDWFSSVEGL---FDVIVSNPPY 174 + + V +RFD D + + L FD +V+NPP+ Sbjct: 269 IMHDVHYKRFDIENDDTLEAPQHLDLRFDAVVANPPF 305 >gi|269124815|ref|YP_003298185.1| type 11 methyltransferase [Thermomonospora curvata DSM 43183] gi|268309773|gb|ACY96147.1| Methyltransferase type 11 [Thermomonospora curvata DSM 43183] Length = 356 Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust. Identities = 25/78 (32%), Positives = 36/78 (46%) Query: 92 RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151 RI D RI D+G G G LAL + P G+D ++E A+ +A G+ R Sbjct: 170 RINGADRPRIADVGCGQGWSSLALARAFPNAWVDGIDADAASIEDARRHAAEAGLDGRLR 229 Query: 152 TLQSDWFSSVEGLFDVIV 169 D +G +D+IV Sbjct: 230 FRCEDAAELADGPYDLIV 247 >gi|206972576|ref|ZP_03233519.1| conserved hypothetical protein [Bacillus cereus AH1134] gi|229067799|ref|ZP_04201117.1| hypothetical protein bcere0025_240 [Bacillus cereus F65185] gi|229176635|ref|ZP_04304040.1| hypothetical protein bcere0005_230 [Bacillus cereus 172560W] gi|206732478|gb|EDZ49657.1| conserved hypothetical protein [Bacillus cereus AH1134] gi|228606802|gb|EEK64218.1| hypothetical protein bcere0005_230 [Bacillus cereus 172560W] gi|228715283|gb|EEL67141.1| hypothetical protein bcere0025_240 [Bacillus cereus F65185] Length = 246 Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust. Identities = 27/83 (32%), Positives = 39/83 (46%), Gaps = 9/83 (10%) Query: 101 ILDLGTGTGAVCLALLKESPFFKG--VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 +LDL TG V L L S KG GV+I + ++ + NG+ ER + D Sbjct: 48 LLDLCTGNAVVPLLL---STRTKGNITGVEIQERLYDMGVRSVQYNGLEERIHLIHGDLK 104 Query: 159 SSVEGL----FDVIVSNPPYIES 177 E L +DV+ NPPY ++ Sbjct: 105 DMPEKLGRHQYDVVTCNPPYFQT 127 >gi|330902934|gb|EGH33877.1| SAM-dependent methyltransferase [Pseudomonas syringae pv. japonica str. M301072PT] Length = 177 Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust. Identities = 33/113 (29%), Positives = 54/113 (47%), Gaps = 30/113 (26%) Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPP-YIESVI 179 VD S AL+ + NA NG +E+ ++ D F +++ L FDVIV++PP +I+ Sbjct: 44 VDASSFALDGVERNAALNGFAEKMTCIEGDVFEALKELKAAEERFDVIVADPPAFIK--- 100 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL-----CSVEI 227 R D + +G YR + + R L+KDG+ CS+ + Sbjct: 101 --------RKKDMK-------NGEGAYRRLNEQAMRLLSKDGILVSASCSMHL 138 >gi|312867208|ref|ZP_07727418.1| RNA methyltransferase, RsmD family [Streptococcus parasanguinis F0405] gi|311097337|gb|EFQ55571.1| RNA methyltransferase, RsmD family [Streptococcus parasanguinis F0405] Length = 179 Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust. Identities = 25/84 (29%), Positives = 41/84 (48%), Gaps = 4/84 (4%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW-- 157 R+LDL G+G + + + + V V+ +A EI +N ERF L+ + Sbjct: 44 RVLDLYAGSGGLSIEAVSRG-MSEAVLVERDRRAQEIVAANIAMTKEKERFQLLKMEAKQ 102 Query: 158 -FSSVEGLFDVIVSNPPYIESVIV 180 F + G FD++ +PPY + IV Sbjct: 103 AFGLLTGTFDLVFLDPPYAKEEIV 126 >gi|237731814|ref|ZP_04562295.1| conserved hypothetical protein [Citrobacter sp. 30_2] gi|226907353|gb|EEH93271.1| conserved hypothetical protein [Citrobacter sp. 30_2] Length = 270 Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust. Identities = 35/115 (30%), Positives = 48/115 (41%), Gaps = 21/115 (18%) Query: 59 DFYNVRLTLSSDTFEPRPE------------TELLVDSALAFSLPRIEKRDVVRILDLGT 106 D Y +L L++ T E +PE L DS L L +I+ + + D+G Sbjct: 10 DLYRKQLQLANRT-EKKPEHWDKRAEKMAENCASLTDSYLLQLLGKIDLKGAESLFDMGC 68 Query: 107 GTGAVCLALLKESPFFKGVGVD---ISCKALEIAKSNA-----VTNGVSERFDTL 153 G G V LAL K+ P GV +S A A+ NA V E +D L Sbjct: 69 GPGTVSLALAKKMPIIYGVDYSQGMLSVAARRAAQMNARHVQWVQRAWEEHWDDL 123 >gi|240147095|ref|ZP_04745696.1| conserved hypothetical protein [Roseburia intestinalis L1-82] gi|257200743|gb|EEU99027.1| conserved hypothetical protein [Roseburia intestinalis L1-82] Length = 498 Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust. Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 3/91 (3%) Query: 84 SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143 +A+ SL + ++ +ILD G G + + P + G+DI A+E A+ NA Sbjct: 336 AAMLVSLAKPYLKENAQILDPFCGVGTMLIERDIAQPAREKYGIDIFGPAIEGARENASL 395 Query: 144 NGVSERFDTLQSDWFS-SVEGLFDVIVSNPP 173 G E+ + + D+F + LFD I++N P Sbjct: 396 AG--EKINFIHRDYFDFKHDYLFDEIITNMP 424 >gi|255936501|ref|XP_002559277.1| Pc13g08520 [Penicillium chrysogenum Wisconsin 54-1255] gi|211583897|emb|CAP91921.1| Pc13g08520 [Penicillium chrysogenum Wisconsin 54-1255] Length = 290 Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust. Identities = 22/53 (41%), Positives = 31/53 (58%), Gaps = 1/53 (1%) Query: 96 RDVVRILDLGTGTGA-VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147 R+ ++DLG+G G V LA K P K +GVD++ LE+A+ NA G S Sbjct: 67 REGETVIDLGSGGGIDVLLAAKKVGPRGKAIGVDMTKSMLELARKNAEKAGAS 119 >gi|134045299|ref|YP_001096785.1| hypothetical protein MmarC5_0254 [Methanococcus maripaludis C5] gi|132662924|gb|ABO34570.1| protein of unknown function DUF890 [Methanococcus maripaludis C5] Length = 264 Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust. Identities = 25/89 (28%), Positives = 44/89 (49%), Gaps = 11/89 (12%) Query: 94 EKRDVVRILDLGTGTGAVCLALLKESPFFKG--VGVDISCKALEIAKSNAVTNGVSERFD 151 EK D+ +L++GTG+G + + + K +F+ D L+IA+ N N ++ + + Sbjct: 83 EKEDIKEVLEIGTGSGIISILIAK---YFECNVTATDTVFDYLKIAEENISKNNLNSKIN 139 Query: 152 TLQS------DWFSSVEGLFDVIVSNPPY 174 + S D FD+I+S PPY Sbjct: 140 LVDSKGKIIFDIPELKNKKFDLIISYPPY 168 >gi|302189124|ref|ZP_07265797.1| ribosomal RNA small subunit methyltransferase C [Pseudomonas syringae pv. syringae 642] Length = 332 Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust. Identities = 26/105 (24%), Positives = 45/105 (42%), Gaps = 2/105 (1%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 +D A L I+K +LD G G G + A+ + P + + +D+ A ++ Sbjct: 176 LDRGSALLLENIDKLPSGNLLDFGCGAGVLGAAIKRRYPHNEVIMLDVDAFATASSRLTL 235 Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLE 186 NG+ + L D + + I+SNPP+ V D + E Sbjct: 236 AANGLQAQ--VLTGDGIDAAPMGLNTILSNPPFHVGVHTDYMATE 278 >gi|239827791|ref|YP_002950415.1| MCP methyltransferase, CheR-type [Geobacillus sp. WCH70] gi|298351891|sp|C5D4V7|Y2453_GEOSW RecName: Full=Putative methyltransferase GWCH70_2453 gi|239808084|gb|ACS25149.1| MCP methyltransferase, CheR-type [Geobacillus sp. WCH70] Length = 247 Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust. Identities = 23/61 (37%), Positives = 33/61 (54%), Gaps = 2/61 (3%) Query: 90 LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 L + ++ RILD+G GTG + + L KE F GVD+S L IA++ A V+ Sbjct: 30 LKQYGRQGAKRILDVGCGTGELAVRLAKEG--FLVTGVDLSENMLAIAQAKAEAQQVTIE 87 Query: 150 F 150 F Sbjct: 88 F 88 >gi|241205537|ref|YP_002976633.1| ribosomal protein L11 methyltransferase [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240859427|gb|ACS57094.1| ribosomal L11 methyltransferase [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 292 Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust. Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 9/85 (10%) Query: 93 IEKRDVVRILDLGTGTGAVCLAL--LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150 + R V LDLGTG+G + +A+ L+ P DI A ++A N NG++ Sbjct: 147 VRSRLVRNALDLGTGSGVLAIAVRKLRNIPVL---ATDIDPIATKVAAENVRRNGIASGI 203 Query: 151 DTLQSDWFSSV----EGLFDVIVSN 171 T + F S +G FD+I++N Sbjct: 204 VTRTAPGFHSTAFSEQGPFDLIIAN 228 >gi|148238697|ref|YP_001224084.1| glycine-sarcosine methyltransferase [Synechococcus sp. WH 7803] gi|147847236|emb|CAK22787.1| Glycine-sarcosine methyltransferase [Synechococcus sp. WH 7803] Length = 302 Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust. Identities = 45/159 (28%), Positives = 68/159 (42%), Gaps = 23/159 (14%) Query: 14 VTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFE 73 +T SH P + DD QRF T VR H I + D ++ RL ++ Sbjct: 23 MTSTKSH-----PSANPDDAQRFGETPESVRETDHYQQEYIEQFADRWD-RLI----DWQ 72 Query: 74 PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133 R E E F + + + +LD+ TGTG + LL+E F+ V VD S Sbjct: 73 AREEAEG------DFFVKLLREHGAKSVLDVATGTGFHSVRLLREG--FEVVSVDGSPNM 124 Query: 134 LEIAKSNAVTNGVSERFDTLQSDWF---SSVEGLFDVIV 169 L A NA + + R T+ +DW + G +D ++ Sbjct: 125 LARAFKNARSRDLLMR--TVHADWRFLNRDIHGEYDAVI 161 >gi|83645197|ref|YP_433632.1| 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benz oquinol methylase [Hahella chejuensis KCTC 2396] gi|83633240|gb|ABC29207.1| 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benz oquinol methylase [Hahella chejuensis KCTC 2396] Length = 244 Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust. Identities = 29/95 (30%), Positives = 43/95 (45%), Gaps = 7/95 (7%) Query: 82 VDSALAFSLPRIEK-----RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136 +DSA+ P IEK R R+LD G G G + + + S +K +GVD+S + Sbjct: 26 MDSAVRDRFPAIEKVWGGLRRPHRVLDFGCGNGVLSYWMYQNSFAYKVLGVDVSKTGVRN 85 Query: 137 AKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSN 171 A G+ R T + G FD +VS+ Sbjct: 86 AHREFAQPGLDYRVITSPMN--VRQLGAFDAVVSS 118 >gi|30018306|ref|NP_829937.1| methyltransferase [Bacillus cereus ATCC 14579] gi|218232737|ref|YP_002364884.1| hypothetical protein BCB4264_A0039 [Bacillus cereus B4264] gi|228956476|ref|ZP_04118273.1| hypothetical protein bthur0005_230 [Bacillus thuringiensis serovar pakistani str. T13001] gi|229039939|ref|ZP_04189704.1| hypothetical protein bcere0027_220 [Bacillus cereus AH676] gi|229107721|ref|ZP_04237358.1| hypothetical protein bcere0018_230 [Bacillus cereus Rock1-15] gi|229125552|ref|ZP_04254585.1| hypothetical protein bcere0015_230 [Bacillus cereus BDRD-Cer4] gi|229142840|ref|ZP_04271283.1| hypothetical protein bcere0012_220 [Bacillus cereus BDRD-ST24] gi|229148444|ref|ZP_04276701.1| hypothetical protein bcere0011_230 [Bacillus cereus m1550] gi|229188320|ref|ZP_04315369.1| hypothetical protein bcere0002_230 [Bacillus cereus ATCC 10876] gi|296500867|ref|YP_003662567.1| methyltransferase [Bacillus thuringiensis BMB171] gi|29893846|gb|AAP07138.1| Methyltransferase [Bacillus cereus ATCC 14579] gi|218160694|gb|ACK60686.1| conserved hypothetical protein [Bacillus cereus B4264] gi|228595119|gb|EEK52889.1| hypothetical protein bcere0002_230 [Bacillus cereus ATCC 10876] gi|228634986|gb|EEK91558.1| hypothetical protein bcere0011_230 [Bacillus cereus m1550] gi|228640603|gb|EEK96990.1| hypothetical protein bcere0012_220 [Bacillus cereus BDRD-ST24] gi|228657869|gb|EEL13674.1| hypothetical protein bcere0015_230 [Bacillus cereus BDRD-Cer4] gi|228675694|gb|EEL30901.1| hypothetical protein bcere0018_230 [Bacillus cereus Rock1-15] gi|228727398|gb|EEL78590.1| hypothetical protein bcere0027_220 [Bacillus cereus AH676] gi|228803166|gb|EEM49987.1| hypothetical protein bthur0005_230 [Bacillus thuringiensis serovar pakistani str. T13001] gi|296321919|gb|ADH04847.1| methyltransferase [Bacillus thuringiensis BMB171] Length = 246 Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust. Identities = 27/83 (32%), Positives = 39/83 (46%), Gaps = 9/83 (10%) Query: 101 ILDLGTGTGAVCLALLKESPFFKG--VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 +LDL TG V L L S KG GV+I + ++ + NG+ ER + D Sbjct: 48 LLDLCTGNAVVPLLL---STRTKGNITGVEIQERLYDMGVRSVQYNGLEERIHLIHGDLK 104 Query: 159 SSVEGL----FDVIVSNPPYIES 177 E L +DV+ NPPY ++ Sbjct: 105 DMPEKLGRHQYDVVTCNPPYFQT 127 >gi|329295748|ref|ZP_08253084.1| ribosomal protein L11 methyltransferase [Plautia stali symbiont] Length = 293 Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust. Identities = 17/50 (34%), Positives = 32/50 (64%), Gaps = 1/50 (2%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150 ++D G G+G + +A LK + +G+DI +A++ ++ NA NGV++R Sbjct: 162 VIDFGCGSGILAIAALKLG-AAQAIGIDIDPQAIQASRDNAERNGVADRL 210 >gi|310794663|gb|EFQ30124.1| methyltransferase domain-containing protein [Glomerella graminicola M1.001] Length = 346 Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust. Identities = 22/61 (36%), Positives = 31/61 (50%), Gaps = 5/61 (8%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+LD+GTGTG + E P +GVD+S +SN V S + D ++ DW Sbjct: 107 RVLDVGTGTGIWAMDYADEHPEASVIGVDLS-----PIQSNYVPPNCSFQIDDIEEDWTW 161 Query: 160 S 160 S Sbjct: 162 S 162 >gi|303247595|ref|ZP_07333866.1| ribosomal L11 methyltransferase [Desulfovibrio fructosovorans JJ] gi|302491075|gb|EFL50969.1| ribosomal L11 methyltransferase [Desulfovibrio fructosovorans JJ] Length = 286 Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust. Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 3/73 (4%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD-TLQSDWF 158 R LDLGTG+G + + L K GVG+DI +A+ A N N V E + Sbjct: 154 RFLDLGTGSGILGIGLAKLG--LTGVGLDIDPQAVWCAAENLRLNAVDEAMSLAVGGVGA 211 Query: 159 SSVEGLFDVIVSN 171 S E +FD++ +N Sbjct: 212 VSPEAVFDIVAAN 224 >gi|296333297|ref|ZP_06875750.1| ribosomal protein L11 methyltransferase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305675198|ref|YP_003866870.1| ribosomal protein L11 methyltransferase [Bacillus subtilis subsp. spizizenii str. W23] gi|296149495|gb|EFG90391.1| ribosomal protein L11 methyltransferase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305413442|gb|ADM38561.1| ribosomal protein L11 methyltransferase [Bacillus subtilis subsp. spizizenii str. W23] Length = 311 Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust. Identities = 36/141 (25%), Positives = 65/141 (46%), Gaps = 30/141 (21%) Query: 56 GWRDFYN-------VRLTLSSDTFEPRPETELLV--DSALAF-------------SLPRI 93 W+ +Y+ + + + + P EL++ D +AF +L RI Sbjct: 113 AWKKYYHPVKISEKFTIVPTWEEYTPVHTDELIIEMDPGMAFGTGTHPTTVLCIQALERI 172 Query: 94 -EKRDVVRILDLGTGTG--AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150 +K D +++D+GTG+G ++ A+L+ D+ A+E A+ N N VS+ Sbjct: 173 VQKGD--KVIDVGTGSGILSIAAAMLEAESVH---AYDLDPVAVESARLNLKLNKVSDIA 227 Query: 151 DTLQSDWFSSVEGLFDVIVSN 171 Q++ +EG DVIV+N Sbjct: 228 QVKQNNLLDGIEGEHDVIVAN 248 >gi|240015800|ref|ZP_04722340.1| ribosomal protein L11 methyltransferase [Neisseria gonorrhoeae FA6140] gi|240114890|ref|ZP_04728952.1| ribosomal protein L11 methyltransferase [Neisseria gonorrhoeae PID18] gi|260441294|ref|ZP_05795110.1| ribosomal protein L11 methyltransferase [Neisseria gonorrhoeae DGI2] gi|268600547|ref|ZP_06134714.1| ribosomal protein L11 methyltransferase [Neisseria gonorrhoeae PID18] gi|268584678|gb|EEZ49354.1| ribosomal protein L11 methyltransferase [Neisseria gonorrhoeae PID18] Length = 295 Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust. Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 11/74 (14%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDW 157 +LD G G+G + +A LK VGVDI +A+ + NA N V +F D+L Sbjct: 167 VLDYGCGSGILTIAALKLGA-GSAVGVDIDEQAVRAGRDNAEQNNVDAQFFLPDSLP--- 222 Query: 158 FSSVEGLFDVIVSN 171 +G FDV+V+N Sbjct: 223 ----QGQFDVVVAN 232 >gi|239787602|emb|CAX84070.1| Ribosomal protein L11 methyltransferase [uncultured bacterium] Length = 283 Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust. Identities = 41/139 (29%), Positives = 63/139 (45%), Gaps = 29/139 (20%) Query: 57 WRDFYNV-----RLTLSSDTFEPRPETELLV---DSALAFS----------LPRIE---- 94 W++ Y+ RL + EP E LV D +AF L +E Sbjct: 88 WKESYHPLPVGQRLLVVPSWLEPPESGERLVLRMDPEMAFGSGAHATTRGCLELLEEVAG 147 Query: 95 KRDVVRILDLGTGTG--AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152 ++ + R+LDLGTG+G A+ A+L V D+ A+E A+ NA NGV+ R Sbjct: 148 QKGLGRVLDLGTGSGVLAIWAAMLGADGV---VATDLDPVAVETAERNARLNGVAGRVTV 204 Query: 153 LQSDWFSSVEGLFDVIVSN 171 ++S + G + IV+N Sbjct: 205 VESALVPA--GRYRTIVAN 221 >gi|229176526|ref|ZP_04303955.1| Type I restriction-modification system, M subunit [Bacillus cereus MM3] gi|228606963|gb|EEK64356.1| Type I restriction-modification system, M subunit [Bacillus cereus MM3] Length = 530 Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust. Identities = 23/90 (25%), Positives = 41/90 (45%), Gaps = 9/90 (10%) Query: 94 EKRDVVRILDLGTGTGAVCLAL---LKESPFFKGVGVDISCKALEIAKSNAVTNGVSER- 149 E + + + D G+G++ L + + K G +++ +AK N + +GV + Sbjct: 214 EDKKLFSVFDPTMGSGSLMLNIRNYINHPDSVKYHGQELNTTTYNLAKMNLILHGVDKED 273 Query: 150 -----FDTLQSDWFSSVEGLFDVIVSNPPY 174 DTL DW + FD ++ NPPY Sbjct: 274 MRLRNGDTLNKDWPTDEPYTFDSVLMNPPY 303 >gi|91201823|emb|CAJ74883.1| strongly similar to glycine-sarcosine-dimethylglycine methyltransferase [Candidatus Kuenenia stuttgartiensis] Length = 280 Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust. Identities = 28/85 (32%), Positives = 42/85 (49%), Gaps = 7/85 (8%) Query: 88 FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147 F + + +R +ILD+ TGTG + LLK F+ V D S + L A + +G Sbjct: 57 FFIEELRRRGARKILDVATGTGFHSIRLLKAG--FEVVSADGSPEMLAKAFATGREHGFI 114 Query: 148 ERFDTLQSDW---FSSVEGLFDVIV 169 R T+Q+DW V G FD ++ Sbjct: 115 LR--TVQADWRWLNRDVHGKFDAVI 137 >gi|152978325|ref|YP_001343954.1| ribosomal protein L11 methyltransferase [Actinobacillus succinogenes 130Z] gi|171704236|sp|A6VM22|PRMA_ACTSZ RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11 Mtase gi|150840048|gb|ABR74019.1| ribosomal protein L11 methyltransferase [Actinobacillus succinogenes 130Z] Length = 293 Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust. Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 2/71 (2%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 ++D G G+G + +A LK +G+DI +A+ + SNA NGV++R SD Sbjct: 162 VIDFGCGSGILAIAALKLGAK-NAIGIDIDPQAILASGSNAQANGVADRLQLFLSD-RQP 219 Query: 161 VEGLFDVIVSN 171 + DV+V+N Sbjct: 220 ADLKADVVVAN 230 >gi|330969342|gb|EGH69408.1| ribosomal RNA small subunit methyltransferase C [Pseudomonas syringae pv. aceris str. M302273PT] Length = 332 Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust. Identities = 26/105 (24%), Positives = 45/105 (42%), Gaps = 2/105 (1%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 +D A L I+K +LD G G G + A+ + P + + +D+ A ++ Sbjct: 176 LDRGSALLLENIDKLPSGNLLDFGCGAGVLGAAIKRRYPHNEVIMLDVDAFATASSRLTL 235 Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLE 186 NG+ + L D + + I+SNPP+ V D + E Sbjct: 236 AANGLQAQ--VLTGDGIDAAPMGLNTILSNPPFHVGVHTDYMATE 278 >gi|315221974|ref|ZP_07863885.1| RNA methyltransferase, RsmD family [Streptococcus anginosus F0211] gi|315188940|gb|EFU22644.1| RNA methyltransferase, RsmD family [Streptococcus anginosus F0211] Length = 214 Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust. Identities = 33/131 (25%), Positives = 58/131 (44%), Gaps = 16/131 (12%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+LDL G+G++ + + V V+ +A I N + ERF+ L+ + Sbjct: 79 RVLDLYAGSGSLAIEAISRG-MASAVLVEKDRRAQTIISQNIIMTKEKERFELLKMESNR 137 Query: 160 SVE---GLFDVIVSNPPYI-ESVIVDCLGLEVRDF-----------DPRISLDGGIDGLS 204 ++E G FD+++ +PPY E + D L R+ D + L I GL Sbjct: 138 ALELVTGQFDLVLLDPPYAKEQIAADIEKLVERELLSDDVLVVCETDKSVDLPEEIAGLG 197 Query: 205 HYRTIADGVSR 215 ++ G+S+ Sbjct: 198 IWKQKIYGISK 208 >gi|282850456|ref|ZP_06259835.1| type I restriction-modification system, M subunit [Veillonella parvula ATCC 17745] gi|282579949|gb|EFB85353.1| type I restriction-modification system, M subunit [Veillonella parvula ATCC 17745] Length = 533 Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust. Identities = 41/155 (26%), Positives = 69/155 (44%), Gaps = 32/155 (20%) Query: 95 KRDVVRILDLGTGTGAVCLALLKESP---------FFKGVGVDISCKALEIAKSNAVTNG 145 + D + D G+G++ L + E P F+ G +++ +A+ N + +G Sbjct: 225 QNDTFTVYDPTMGSGSLLLTVRNELPDGSRQGAVSFY---GQELNTVTYNLARMNLMMHG 281 Query: 146 VS------ERFDTLQSDWFSSVE--GL-----FDVIVSNPPYIESVIVDCLGLEVRDFDP 192 V+ DTL+SDW + G+ FD +V+NPPY S D +++ DP Sbjct: 282 VTYNNMTLNNADTLESDWPDGPDRDGIDRPRSFDAVVANPPY--SAKWDNSESKLK--DP 337 Query: 193 RISLDGGIDGLSH--YRTIADGVSRHLNKDGLCSV 225 R S G + S Y I + HLN +G ++ Sbjct: 338 RFSDYGKLAPASKADYAFILHSL-YHLNNEGTMAI 371 >gi|240013355|ref|ZP_04720268.1| ribosomal protein L11 methyltransferase [Neisseria gonorrhoeae DGI18] gi|240079937|ref|ZP_04724480.1| ribosomal protein L11 methyltransferase [Neisseria gonorrhoeae FA19] gi|240112144|ref|ZP_04726634.1| ribosomal protein L11 methyltransferase [Neisseria gonorrhoeae MS11] gi|240117094|ref|ZP_04731156.1| ribosomal protein L11 methyltransferase [Neisseria gonorrhoeae PID1] gi|240120428|ref|ZP_04733390.1| ribosomal protein L11 methyltransferase [Neisseria gonorrhoeae PID24-1] gi|240122730|ref|ZP_04735686.1| ribosomal protein L11 methyltransferase [Neisseria gonorrhoeae PID332] gi|240124921|ref|ZP_04737807.1| ribosomal protein L11 methyltransferase [Neisseria gonorrhoeae SK-92-679] gi|268596077|ref|ZP_06130244.1| ribosomal protein L11 methyltransferase [Neisseria gonorrhoeae FA19] gi|268598202|ref|ZP_06132369.1| ribosomal protein L11 methyltransferase [Neisseria gonorrhoeae MS11] gi|268602780|ref|ZP_06136947.1| ribosomal protein L11 methyltransferase [Neisseria gonorrhoeae PID1] gi|268681329|ref|ZP_06148191.1| ribosomal protein L11 methyltransferase [Neisseria gonorrhoeae PID332] gi|268683500|ref|ZP_06150362.1| ribosomal protein L11 methyltransferase [Neisseria gonorrhoeae SK-92-679] gi|268549865|gb|EEZ44884.1| ribosomal protein L11 methyltransferase [Neisseria gonorrhoeae FA19] gi|268582333|gb|EEZ47009.1| ribosomal protein L11 methyltransferase [Neisseria gonorrhoeae MS11] gi|268586911|gb|EEZ51587.1| ribosomal protein L11 methyltransferase [Neisseria gonorrhoeae PID1] gi|268621613|gb|EEZ54013.1| ribosomal protein L11 methyltransferase [Neisseria gonorrhoeae PID332] gi|268623784|gb|EEZ56184.1| ribosomal protein L11 methyltransferase [Neisseria gonorrhoeae SK-92-679] Length = 295 Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust. Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 11/74 (14%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDW 157 +LD G G+G + +A LK VGVDI +A+ + NA N V +F D+L Sbjct: 167 VLDYGCGSGILTIAALKLGA-GSAVGVDIDEQAVRAGRDNAEQNNVDAQFFLPDSLP--- 222 Query: 158 FSSVEGLFDVIVSN 171 +G FDV+V+N Sbjct: 223 ----QGQFDVVVAN 232 >gi|291301387|ref|YP_003512665.1| methyltransferase type 11 [Stackebrandtia nassauensis DSM 44728] gi|290570607|gb|ADD43572.1| Methyltransferase type 11 [Stackebrandtia nassauensis DSM 44728] Length = 243 Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust. Identities = 31/99 (31%), Positives = 46/99 (46%), Gaps = 10/99 (10%) Query: 93 IEKRDVVR--ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150 +E VR +LD+G G G L L ++ GVDIS ALE A+ A GV F Sbjct: 49 VEAAGQVRGTVLDVGCGLGENALFLAGRG--YRVTGVDISPTALEQARQRAADKGVEVDF 106 Query: 151 DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRD 189 + + ++ FD + I+S + CL E+R+ Sbjct: 107 VVGDATRLAGLDARFDTV------IDSALFHCLKPELRN 139 >gi|228918985|ref|ZP_04082365.1| hypothetical protein bthur0011_220 [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228840634|gb|EEM85895.1| hypothetical protein bthur0011_220 [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 246 Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust. Identities = 27/83 (32%), Positives = 39/83 (46%), Gaps = 9/83 (10%) Query: 101 ILDLGTGTGAVCLALLKESPFFKG--VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 +LDL TG V L L S KG GV+I + ++ + NG+ ER + D Sbjct: 48 LLDLCTGNAVVPLLL---STRTKGNITGVEIQERLYDMGVRSVQYNGLEERIHLIHGDLK 104 Query: 159 SSVEGL----FDVIVSNPPYIES 177 E L +DV+ NPPY ++ Sbjct: 105 DMPEKLGRHQYDVVTCNPPYFQT 127 >gi|16272916|ref|NP_439141.1| ribosomal protein L11 methyltransferase [Haemophilus influenzae Rd KW20] gi|1172623|sp|P44402|PRMA_HAEIN RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11 Mtase gi|1574006|gb|AAC22638.1| ribosomal protein L11 methyltransferase (prmA) [Haemophilus influenzae Rd KW20] Length = 296 Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust. Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 2/71 (2%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 ++D G G+G + +A LK VG+DI +A+ +++NA NGV++R SD S Sbjct: 163 VIDFGCGSGILAIAALKLGAK-SAVGIDIDPQAILASRNNAEQNGVTDRLQLFLSDEKPS 221 Query: 161 VEGLFDVIVSN 171 + DV+V+N Sbjct: 222 -DLKADVVVAN 231 >gi|116624370|ref|YP_826526.1| type 11 methyltransferase [Candidatus Solibacter usitatus Ellin6076] gi|116227532|gb|ABJ86241.1| Methyltransferase type 11 [Candidatus Solibacter usitatus Ellin6076] Length = 246 Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust. Identities = 34/110 (30%), Positives = 49/110 (44%), Gaps = 12/110 (10%) Query: 89 SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148 +LPR +R +LDLG G G + L K F + +DIS L IA++ + Sbjct: 52 NLPRRRRR----VLDLGCGAGLLAQELSKH--FDSVLAIDISEPMLAIARAKRSAPNIEY 105 Query: 149 RFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG 198 R + F EG FD +VS+ + I D G R F P ++ G Sbjct: 106 RLADASTAEF---EGEFDAVVSHTTFHH--IADVAGTITR-FKPMLARQG 149 >gi|323337190|gb|EGA78444.1| YIL064W-like protein [Saccharomyces cerevisiae Vin13] Length = 240 Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust. Identities = 45/185 (24%), Positives = 85/185 (45%), Gaps = 22/185 (11%) Query: 69 SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128 SD+ + + LVD+ A+ RI + ++DLGTG G + L + K VG+D Sbjct: 53 SDSDAEQKMIDFLVDNIGAY---RISEN--ASVVDLGTGNGHMLFELHQTEFQGKLVGID 107 Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSS--VEGLFDVIVSNPPYIESVIVDCLGLE 186 S +++++A + A GV Q+D FS G +D++ ++ +D + L Sbjct: 108 YSEESVKLASNIAEATGVDNFISFQQADIFSGDWNPGKYDIV------LDKGTLDAISL- 160 Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246 + ++G +D + Y + V + L KDG+ + + ++V+I E+ L + Sbjct: 161 -----SGMKINGKLDVVDVYAGV---VEKILEKDGIFLITSCNFTQDELVKIIETDNLKM 212 Query: 247 VNAFK 251 K Sbjct: 213 WKTIK 217 >gi|308374659|ref|ZP_07436882.2| hypothetical protein TMFG_03572 [Mycobacterium tuberculosis SUMu006] gi|308377091|ref|ZP_07441107.2| hypothetical protein TMHG_01874 [Mycobacterium tuberculosis SUMu008] gi|308341169|gb|EFP30020.1| hypothetical protein TMFG_03572 [Mycobacterium tuberculosis SUMu006] gi|308348924|gb|EFP37775.1| hypothetical protein TMHG_01874 [Mycobacterium tuberculosis SUMu008] Length = 225 Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust. Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 2/69 (2%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LD GTG G A+ + + G+D S A+E A+ NA GVS F + Sbjct: 29 VLDPGTGPGH--HAIYYAAKGYAATGIDGSVAAIERARDNARKAGVSVNFQVGDATTLDG 86 Query: 161 VEGLFDVIV 169 ++G FD +V Sbjct: 87 LDGRFDTVV 95 >gi|308180830|ref|YP_003924958.1| methyltransferase (putative) [Lactobacillus plantarum subsp. plantarum ST-III] gi|308046321|gb|ADN98864.1| methyltransferase (putative) [Lactobacillus plantarum subsp. plantarum ST-III] Length = 252 Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust. Identities = 27/100 (27%), Positives = 47/100 (47%), Gaps = 7/100 (7%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCL-ALLKESPFFKGVGVDISCKALEIAKSN 140 +D+ L ++ K +I+DL GTGAV L A K V+I + E+A+ + Sbjct: 33 LDAVLLGDFAQVAKGAKSQIVDLCAGTGAVGLFASAKTQGHI--TAVEIQPRLAEMAQRS 90 Query: 141 AVTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPYIE 176 + N ++++ L D + L D ++ NPPY + Sbjct: 91 VILNDLTQQMTVLNEDLLAITHQLPKDSVDTVLCNPPYFK 130 >gi|296392459|ref|YP_003657343.1| cyclopropane-fatty-acyl-phospholipid synthase [Segniliparus rotundus DSM 44985] gi|296179606|gb|ADG96512.1| Cyclopropane-fatty-acyl-phospholipid synthase [Segniliparus rotundus DSM 44985] Length = 428 Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust. Identities = 34/123 (27%), Positives = 53/123 (43%), Gaps = 23/123 (18%) Query: 60 FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDL------------GTG 107 F + + SS FE P T+ LP ++R V R+LDL GTG Sbjct: 167 FLDETMVYSSALFEQLPATQ--------DELPEAQRRKVDRLLDLAGVRAGSRVLEIGTG 218 Query: 108 TGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDV 167 G +CL + + V +SC+ E+A G +++ D + SV+G +D Sbjct: 219 WGELCLRAAQRGATVR--SVTLSCEQRELALDRVRRAGFADQVAVDLCD-YRSVDGQYDC 275 Query: 168 IVS 170 +VS Sbjct: 276 VVS 278 >gi|260583905|ref|ZP_05851653.1| methyltransferase [Granulicatella elegans ATCC 700633] gi|260158531|gb|EEW93599.1| methyltransferase [Granulicatella elegans ATCC 700633] Length = 381 Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust. Identities = 23/53 (43%), Positives = 31/53 (58%), Gaps = 5/53 (9%) Query: 125 VGVDISCKALEIAKSNAVTNGVSE--RFDTLQ-SDWFSSVEGLFDVIVSNPPY 174 +G DI +EIAK NA+ GVSE F +Q D+ + E V+V+NPPY Sbjct: 256 LGADIDGSMIEIAKQNAIKAGVSEHIEFKQMQLKDFRTKKEN--GVLVANPPY 306 >gi|209551793|ref|YP_002283710.1| methyltransferase type 11 [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209537549|gb|ACI57484.1| Methyltransferase type 11 [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 286 Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust. Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 2/73 (2%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 ++R+LDL GTG + L +G DIS + +A+S+A G+ RF Sbjct: 55 LIRVLDLACGTGRHAMELAVRGYVVEGS--DISSGMVAVARSSAAERGLDVRFHECSFQT 112 Query: 158 FSSVEGLFDVIVS 170 +++G FDV+++ Sbjct: 113 ADAIQGSFDVVLA 125 >gi|9392585|gb|AAF87202.1| glycine-sarcosine methyltransferase [Halorhodospira halochloris] Length = 268 Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust. Identities = 49/174 (28%), Positives = 69/174 (39%), Gaps = 45/174 (25%) Query: 88 FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147 F + ++KR RILD TGTG + LL+ F V D S + L A N G Sbjct: 50 FFIQELKKRGATRILDAATGTGFHSVRLLEAG--FDVVSADGSAEMLAKAFENGRKRGHI 107 Query: 148 ERFDTLQSDW---FSSVEGLFDVIVS-------------------------NPPYIESVI 179 R T+Q DW + G +D I+ NP E V+ Sbjct: 108 LR--TVQVDWRWLNRDIHGRYDAIICLGNSFTHLFNEKDRRKTLAEFYSALNP---EGVL 162 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS---RHLNKDGLCSVEIGYN 230 + L+ R++D LD G D Y +GVS H++ DGL + +N Sbjct: 163 I----LDQRNYDG--ILDHGYDSSHSYYYCGEGVSVYPEHVD-DGLARFKYEFN 209 >gi|114561846|ref|YP_749359.1| methyltransferase small [Shewanella frigidimarina NCIMB 400] gi|122300753|sp|Q087P4|TRMN6_SHEFN RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName: Full=tRNA m6A37 methyltransferase gi|114333139|gb|ABI70521.1| methyltransferase small [Shewanella frigidimarina NCIMB 400] Length = 251 Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust. Identities = 29/95 (30%), Positives = 39/95 (41%), Gaps = 28/95 (29%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ILD+G G+G + L + SP + A+EI NA +F+ QS W Sbjct: 37 HILDIGAGSGLLSLMAAQRSPHHTSI------IAVEI--DNAAAKAC--QFNIKQSPWSE 86 Query: 160 SV------------------EGLFDVIVSNPPYIE 176 +V E LFD I+ NPPY E Sbjct: 87 TVQLFHGAIQDFQQRHNNNDEPLFDHIICNPPYFE 121 >gi|302785964|ref|XP_002974754.1| hypothetical protein SELMODRAFT_102305 [Selaginella moellendorffii] gi|300157649|gb|EFJ24274.1| hypothetical protein SELMODRAFT_102305 [Selaginella moellendorffii] Length = 261 Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust. Identities = 35/119 (29%), Positives = 58/119 (48%), Gaps = 15/119 (12%) Query: 69 SDTFEPRPETELLVDSALA--FSLPRIEKRDVVRILDLGTGTGAV----CLALLKESPFF 122 +D +EP ++ LVD+ LA L ++ + +++G G+G V L L E Sbjct: 12 ADVYEPCDDSFALVDALLADRSHLAELQPK---LCMEIGCGSGYVISSLALMLRDEVESS 68 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIES 177 + V DI+ A E +GVS D +++D S +E G D++V NPPY+ + Sbjct: 69 QYVATDINQAATETTLETLKAHGVSA--DVVRTDLVSGLERRLAGSVDLLVFNPPYVPT 125 >gi|240281637|gb|EER45140.1| S-adenosylmethionine-dependent methyltransferase [Ajellomyces capsulatus H143] Length = 271 Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust. Identities = 22/41 (53%), Positives = 30/41 (73%), Gaps = 4/41 (9%) Query: 101 ILDLGTGTGAVCLALLKESPFFKG---VGVDISCKALEIAK 138 ILDLGTG G++ LALL++ F G VGVD S K++E+A+ Sbjct: 37 ILDLGTGNGSM-LALLRDEGGFTGGQMVGVDYSSKSIELAR 76 >gi|228950583|ref|ZP_04112718.1| hypothetical protein bthur0006_240 [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228809058|gb|EEM55542.1| hypothetical protein bthur0006_240 [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 246 Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust. Identities = 27/83 (32%), Positives = 39/83 (46%), Gaps = 9/83 (10%) Query: 101 ILDLGTGTGAVCLALLKESPFFKG--VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 +LDL TG V L L S KG GV+I + ++ + NG+ ER + D Sbjct: 48 LLDLCTGNAVVPLLL---STRTKGNITGVEIQERLYDMGVRSVQYNGLEERIHLIHGDLK 104 Query: 159 SSVEGL----FDVIVSNPPYIES 177 E L +DV+ NPPY ++ Sbjct: 105 DMPEKLGRHQYDVVTCNPPYFQT 127 >gi|225556777|gb|EEH05065.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR] Length = 344 Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust. Identities = 22/41 (53%), Positives = 30/41 (73%), Gaps = 4/41 (9%) Query: 101 ILDLGTGTGAVCLALLKESPFFKG---VGVDISCKALEIAK 138 ILDLGTG G++ LALL++ F G VGVD S K++E+A+ Sbjct: 172 ILDLGTGNGSM-LALLRDEGGFTGGQMVGVDYSPKSIELAR 211 >gi|163842198|ref|YP_001626603.1| cyclopropane-fatty-acyl-phospholipid synthase [Renibacterium salmoninarum ATCC 33209] gi|162955674|gb|ABY25189.1| cyclopropane-fatty-acyl-phospholipid synthase [Renibacterium salmoninarum ATCC 33209] Length = 406 Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust. Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 5/74 (6%) Query: 99 VRILDLGTGTGAVCLALLKESPFF--KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 +R+LD+G G G++ + L + F + VGV IS + A+ A GVSE+ + D Sbjct: 196 MRVLDIGCGWGSLSIEL---AELFDVQMVGVTISVEQRAFAQERARQRGVSEQVEIRLQD 252 Query: 157 WFSSVEGLFDVIVS 170 + G FD +VS Sbjct: 253 YREITGGPFDAVVS 266 >gi|115695312|ref|XP_001199139.1| PREDICTED: similar to MGC80481 protein [Strongylocentrotus purpuratus] gi|115740951|ref|XP_791145.2| PREDICTED: similar to MGC80481 protein [Strongylocentrotus purpuratus] Length = 1449 Score = 37.7 bits (86), Expect = 1.6, Method: Composition-based stats. Identities = 44/168 (26%), Positives = 73/168 (43%), Gaps = 15/168 (8%) Query: 17 LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRP 76 +++ +V+ + V DD Q+ R K+ S H I G N F R Sbjct: 1206 VNAEEVVREKGEVKDDDQKSKPKAKQRRQRKYTSKHDIAGGSKHLNKYWAQRYRLFS-RF 1264 Query: 77 ETELLVDSALAFSLP--RIEKRDVVR-----ILD--LGTGTGAVCLALLKESPFFKGVGV 127 + + +D +S+ RI + R I+D G+G A+ A E + V V Sbjct: 1265 DEGIKLDEEGWYSVTPERIAEHQAERCRCDLIVDAFCGSGGNAIQFAFTCE----RVVAV 1320 Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPY 174 DI +E+A+ NA GV +R + + D+F + L DV+ +PP+ Sbjct: 1321 DIDPAKIELARHNATVYGVEDRIEFIVGDFFKVADYLKADVVFLSPPW 1368 >gi|254495215|ref|ZP_05108139.1| methyltransferase [Polaribacter sp. MED152] gi|85819567|gb|EAQ40724.1| methyltransferase [Polaribacter sp. MED152] Length = 222 Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust. Identities = 25/86 (29%), Positives = 41/86 (47%), Gaps = 6/86 (6%) Query: 95 KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154 K +V ILD+G+GTG + L + + S F V+I A E N + +R Sbjct: 17 KDEVDSILDIGSGTGILGLMMAQRSEAFTIDAVEIDEAAYEQTVENFEGSDWGDRLFCYH 76 Query: 155 SDWFS------SVEGLFDVIVSNPPY 174 S++ E +D+++SNPP+ Sbjct: 77 SNFIDFADEIVEEEESYDLVISNPPF 102 >gi|317180666|dbj|BAJ58452.1| Type I restriction enzyme M protein [Helicobacter pylori F32] Length = 543 Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust. Identities = 28/90 (31%), Positives = 44/90 (48%), Gaps = 9/90 (10%) Query: 94 EKRDVVRILDLGTGTGAVCLALLKE--SPFFKGVGVDISCKALEIAKSNAVTNGVSERF- 150 E V+I D GTG + +AL + + DIS K+L++ K N + N ++ Sbjct: 226 EPTQNVKIYDPSAGTGTLLMALAHQIGTNSCTLYAQDISQKSLKMLKLNLILNDLTHSLK 285 Query: 151 -----DTLQSDWFSS-VEGLFDVIVSNPPY 174 +TL + + S +G D IVSNPP+ Sbjct: 286 YAIEGNTLTNPYHSKECKGKMDYIVSNPPF 315 >gi|297379660|gb|ADI34547.1| type I restriction enzyme M protein [Helicobacter pylori v225d] Length = 543 Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust. Identities = 28/90 (31%), Positives = 44/90 (48%), Gaps = 9/90 (10%) Query: 94 EKRDVVRILDLGTGTGAVCLALLKE--SPFFKGVGVDISCKALEIAKSNAVTNGVSERF- 150 E V+I D GTG + +AL + + DIS K+L++ K N + N ++ Sbjct: 226 EPTKSVKIYDPSAGTGTLLMALAHQIGTDSCTLYAQDISQKSLKMLKLNLILNDLTHSLK 285 Query: 151 -----DTLQSDWFSS-VEGLFDVIVSNPPY 174 +TL + + S +G D IVSNPP+ Sbjct: 286 YAIEGNTLTNPYHSKECKGKMDYIVSNPPF 315 >gi|229129743|ref|ZP_04258710.1| Type I restriction-modification system, M subunit [Bacillus cereus BDRD-Cer4] gi|228653659|gb|EEL09530.1| Type I restriction-modification system, M subunit [Bacillus cereus BDRD-Cer4] Length = 512 Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust. Identities = 23/90 (25%), Positives = 41/90 (45%), Gaps = 9/90 (10%) Query: 94 EKRDVVRILDLGTGTGAVCLAL---LKESPFFKGVGVDISCKALEIAKSNAVTNGVSER- 149 E + + + D G+G++ L + + K G +++ +AK N + +GV + Sbjct: 196 EDKKLFSVFDPTMGSGSLMLNIQNYINHPDSVKYHGQELNTTTYNLAKMNLILHGVDKED 255 Query: 150 -----FDTLQSDWFSSVEGLFDVIVSNPPY 174 DTL DW + FD ++ NPPY Sbjct: 256 MRLRNGDTLNKDWPTDEPYTFDSVLMNPPY 285 >gi|224046260|ref|XP_002197924.1| PREDICTED: trimethylguanosine synthase homolog [Taeniopygia guttata] Length = 892 Score = 37.7 bits (86), Expect = 1.6, Method: Composition-based stats. Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 5/71 (7%) Query: 105 GTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL 164 G G A+ AL + + + +DI + L +A+ NA GV+E D L D+ + GL Sbjct: 741 GVGGNAIQFALTSK----RVIAIDIDPEKLRLARHNAEVYGVAEHIDFLCGDFMALAAGL 796 Query: 165 -FDVIVSNPPY 174 DV+ +PP+ Sbjct: 797 CADVVFLSPPW 807 >gi|224367261|ref|YP_002601424.1| UbiE2 [Desulfobacterium autotrophicum HRM2] gi|223689977|gb|ACN13260.1| UbiE2 [Desulfobacterium autotrophicum HRM2] Length = 213 Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust. Identities = 26/84 (30%), Positives = 42/84 (50%), Gaps = 7/84 (8%) Query: 57 WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116 + FY++ + + S + + LVDSA ++EK+ R+LD+ +GTG+V LA Sbjct: 15 FAHFYDLFIKMHSHNYGEETR-KFLVDSA------QLEKKRHPRVLDICSGTGSVVLAFS 67 Query: 117 KESPFFKGVGVDISCKALEIAKSN 140 + P VG D + L AK Sbjct: 68 RSLPDSTAVGYDFALGMLYKAKEK 91 >gi|220910017|ref|YP_002485328.1| RNA methylase [Cyanothece sp. PCC 7425] gi|219866628|gb|ACL46967.1| putative RNA methylase [Cyanothece sp. PCC 7425] Length = 224 Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust. Identities = 25/85 (29%), Positives = 46/85 (54%), Gaps = 5/85 (5%) Query: 76 PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135 P +V++ L + ++ K D+ + DLG+G G + + ++ +GVG+DI + +E Sbjct: 71 PTPPEVVEAMLEVA--KVGKDDI--LYDLGSGDGRIVITAAQKF-GTRGVGIDIDPQRVE 125 Query: 136 IAKSNAVTNGVSERFDTLQSDWFSS 160 A NA GV++R +Q D F + Sbjct: 126 EANQNAKEAGVTDRVKFIQQDIFKA 150 >gi|297582376|ref|YP_003698156.1| methyltransferase small [Bacillus selenitireducens MLS10] gi|297140833|gb|ADH97590.1| methyltransferase small [Bacillus selenitireducens MLS10] Length = 241 Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust. Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 5/81 (6%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 RI+DL +GTGAV L ++ E ++I + +++ NGVSER D Sbjct: 43 RIIDLCSGTGAVPL-VMSERTNAAIDAIEIQEALVTMSRKTMAINGVSERVTIHHGDVSD 101 Query: 160 SVE----GLFDVIVSNPPYIE 176 + FD++ NPPY + Sbjct: 102 AGAVVPWNRFDLVTCNPPYFK 122 >gi|15673633|ref|NP_267807.1| hypothetical protein L100263 [Lactococcus lactis subsp. lactis Il1403] gi|12724662|gb|AAK05749.1|AE006395_9 hypothetical protein L100263 [Lactococcus lactis subsp. lactis Il1403] Length = 384 Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust. Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 8/74 (10%) Query: 126 GVDISCKALEIAKSNAVTNGVSE--RFDTLQSDWFSSVEGLFDVIVSNPPY-----IESV 178 G DI K +EIAK NA+ G+S+ ++ ++ F + + L V+VSNPPY +E Sbjct: 265 GFDIDGKMIEIAKHNALAAGLSDVIKYKQMRLQDFRT-DKLDGVLVSNPPYGVRLEVEEA 323 Query: 179 IVDCLGLEVRDFDP 192 + G + F P Sbjct: 324 VAALYGEMGKTFAP 337 >gi|46105458|ref|XP_380533.1| hypothetical protein FG00357.1 [Gibberella zeae PH-1] Length = 254 Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust. Identities = 49/199 (24%), Positives = 86/199 (43%), Gaps = 34/199 (17%) Query: 72 FEPRPETELLVDSALAFS----LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG--- 124 +EP ++ LL+D+ + S L ++++GTG+G V + + G Sbjct: 16 YEPAEDSYLLLDTLSSASETEYLQNAFPDAAPLVVEVGTGSGVVLAFVHAHAQKLFGTRQ 75 Query: 125 ---VGVDISCKALEIAKSNAVTNGVSERFDTLQS-------DWFSSV-EGLFDVIVSNPP 173 GVD++ A A V S+ DT S D +S+ EG DV++ NPP Sbjct: 76 VLTAGVDMNAFACR-ATVGTVAKAESDNPDTHASYLGSCMGDLTTSMREGAIDVLIFNPP 134 Query: 174 YI---------ESVIVDCLGLEVR-DFDP-----RISLDGGIDGLSHYRTIADGVSRHLN 218 Y+ ++ + D LG+ + FD +S GG+DG+ + + + R L+ Sbjct: 135 YVPTPEMPARPDTFVADDLGVTSKTSFDDDSYLLALSYAGGVDGMETTDRLIEALPRTLS 194 Query: 219 KDGLCSVEIGYNQKVDVVR 237 + G + + K D V+ Sbjct: 195 RRGCAYLLLCAQNKPDQVK 213 >gi|311695156|gb|ADP98029.1| rRNA (guanine-N2-)-methyltransferase, RsmD [marine bacterium HP15] Length = 385 Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust. Identities = 26/80 (32%), Positives = 38/80 (47%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LDL G G + LA L E + V D+S +A+ A+ N + D S Sbjct: 246 VLDLACGNGVLGLAALSERRDLQLVFSDVSSQAVLSARRNVEKAFPDAKAAFSHRDGIES 305 Query: 161 VEGLFDVIVSNPPYIESVIV 180 G FD+I+ NPP+ E +V Sbjct: 306 DLGAFDLILLNPPFHEGGVV 325 >gi|307319122|ref|ZP_07598552.1| Methyltransferase type 11 [Sinorhizobium meliloti AK83] gi|306895229|gb|EFN25985.1| Methyltransferase type 11 [Sinorhizobium meliloti AK83] Length = 261 Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust. Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 1/72 (1%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV-SERFDTLQSDWF 158 R+LD+G G G + +P + +GVDIS + LE A + G+ + F+ + + Sbjct: 31 RVLDIGCGAGQTTREAARAAPQGEAIGVDISAEMLEEASRRSAAEGLRNAMFEQGDAQFH 90 Query: 159 SSVEGLFDVIVS 170 G FD+ +S Sbjct: 91 GFPTGGFDLCIS 102 >gi|257880781|ref|ZP_05660434.1| type I restriction-modification system methyltransferase subunit [Enterococcus faecium 1,230,933] gi|257891263|ref|ZP_05670916.1| type I restriction-modification system methyltransferase subunit [Enterococcus faecium 1,231,410] gi|257815009|gb|EEV43767.1| type I restriction-modification system methyltransferase subunit [Enterococcus faecium 1,230,933] gi|257827623|gb|EEV54249.1| type I restriction-modification system methyltransferase subunit [Enterococcus faecium 1,231,410] Length = 540 Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust. Identities = 35/139 (25%), Positives = 56/139 (40%), Gaps = 23/139 (16%) Query: 72 FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES------PFFKGV 125 + P+P +L+ L E + + D G+G++ L K S +F Sbjct: 201 YTPQPVAKLMTQIVLQGK----EDKKGFSVYDATMGSGSLLLNAKKYSHQPGTISYF--- 253 Query: 126 GVDISCKALEIAKSNAVTNGVS------ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179 G +++ +A+ N + +GV DTL DW + FD ++ NPPY Sbjct: 254 GQELNTSTYNLARMNMILHGVPIANQHLHNADTLDQDWPTEEPTNFDGVLMNPPYSAKWS 313 Query: 180 VDCLGLEVRDFDPRISLDG 198 D L+ DPR S G Sbjct: 314 ADKGFLD----DPRFSAYG 328 >gi|190894546|ref|YP_001984839.1| putative methyltransferase [Rhizobium etli CIAT 652] gi|190700207|gb|ACE94289.1| putative methyltransferase protein [Rhizobium etli CIAT 652] Length = 259 Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust. Identities = 19/72 (26%), Positives = 37/72 (51%), Gaps = 1/72 (1%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWF 158 R+LD+G G G + +P + VGVD+ + LE+A+ + G+ F+ + + Sbjct: 31 RVLDIGCGAGQTTREAARAAPQGEAVGVDVLAEMLEVARQRSAAEGLRNVVFEQADAQFH 90 Query: 159 SSVEGLFDVIVS 170 + + FD+ +S Sbjct: 91 AFLPASFDLCIS 102 >gi|151943099|gb|EDN61434.1| conserved protein [Saccharomyces cerevisiae YJM789] Length = 257 Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust. Identities = 45/185 (24%), Positives = 85/185 (45%), Gaps = 22/185 (11%) Query: 69 SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128 SD+ + + LVD+ A+ RI + ++DLGTG G + L + K VG+D Sbjct: 70 SDSDAEQKMIDFLVDNIGAY---RISEN--ASVVDLGTGNGHMLFELHQTEFQGKLVGID 124 Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSS--VEGLFDVIVSNPPYIESVIVDCLGLE 186 S +++++A + A GV Q+D FS G +D++ ++ +D + L Sbjct: 125 YSEESVKLASNIAEATGVDNFISFQQADIFSGDWNPGKYDIV------LDKGTLDAISL- 177 Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246 + ++G +D + Y + V + L KDG+ + + ++V+I E+ L + Sbjct: 178 -----SGMKINGKLDVVDVYAGV---VEKILKKDGIFLITSCNFTQDELVKIIETDNLKM 229 Query: 247 VNAFK 251 K Sbjct: 230 WKTIK 234 >gi|83769909|dbj|BAE60044.1| unnamed protein product [Aspergillus oryzae] Length = 402 Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust. Identities = 21/40 (52%), Positives = 31/40 (77%), Gaps = 3/40 (7%) Query: 101 ILDLGTGTGAVCLALLKESPFFKG--VGVDISCKALEIAK 138 ILDLGTG G++ LALL++ F+G VGVD S +++E+A+ Sbjct: 175 ILDLGTGNGSM-LALLRKRGGFRGVMVGVDYSARSVELAR 213 >gi|320528569|ref|ZP_08029726.1| type I restriction-modification system, M subunit [Solobacterium moorei F0204] gi|320131155|gb|EFW23728.1| type I restriction-modification system, M subunit [Solobacterium moorei F0204] Length = 521 Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust. Identities = 26/97 (26%), Positives = 44/97 (45%), Gaps = 6/97 (6%) Query: 84 SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143 S L L + K + + D G+G++ L + KE+ G + +A+ N + Sbjct: 213 SKLLAKLVTVGKSKLKNVYDPTCGSGSLLLRVAKETDVVSFYGQEKVSTTYNLARMNMLL 272 Query: 144 NGVS------ERFDTLQSDWFSSVEGLFDVIVSNPPY 174 +GV E DTL+ ++ FD +V+NPPY Sbjct: 273 HGVPFNHFDIENNDTLEHPNEEHMKMRFDAVVANPPY 309 >gi|291536635|emb|CBL09747.1| Putative RNA methylase family UPF0020 [Roseburia intestinalis M50/1] Length = 498 Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust. Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 3/91 (3%) Query: 84 SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143 +A+ SL + ++ +ILD G G + + P + G+DI A+E A+ NA Sbjct: 336 AAMLVSLAKPYLKENAQILDPFCGVGTMLIERDIAQPAREKYGIDIFGPAIEGARENASL 395 Query: 144 NGVSERFDTLQSDWFS-SVEGLFDVIVSNPP 173 G E+ + + D+F + LFD I++N P Sbjct: 396 AG--EKINFIHRDYFDFKHDYLFDEIITNMP 424 >gi|260580069|ref|ZP_05847899.1| ribosomal protein L11 methyltransferase [Haemophilus influenzae RdAW] gi|260093353|gb|EEW77286.1| ribosomal protein L11 methyltransferase [Haemophilus influenzae RdAW] Length = 295 Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust. Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 2/71 (2%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 ++D G G+G + +A LK VG+DI +A+ +++NA NGV++R SD S Sbjct: 162 VIDFGCGSGILAIAALKLGAK-SAVGIDIDPQAILASRNNAEQNGVTDRLQLFLSDEKPS 220 Query: 161 VEGLFDVIVSN 171 + DV+V+N Sbjct: 221 -DLKADVVVAN 230 >gi|229015568|ref|ZP_04172563.1| Type I restriction-modification system, M subunit [Bacillus cereus AH1273] gi|228745715|gb|EEL95722.1| Type I restriction-modification system, M subunit [Bacillus cereus AH1273] Length = 497 Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust. Identities = 22/84 (26%), Positives = 42/84 (50%), Gaps = 4/84 (4%) Query: 95 KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS-ERFDTL 153 K ++ + D G+G++ L + KE+ + G + +A+ N + + + +RFD Sbjct: 204 KTEIKDVYDGTCGSGSLLLRVGKEAKVYNYYGQEKVSTTYNLARMNMLLHDIPYQRFDIK 263 Query: 154 QSDWFSSVEGL---FDVIVSNPPY 174 +D + L F+ IV+NPPY Sbjct: 264 NADTLEEPQHLDKRFEAIVANPPY 287 >gi|209527308|ref|ZP_03275817.1| Methyltransferase type 11 [Arthrospira maxima CS-328] gi|209492234|gb|EDZ92580.1| Methyltransferase type 11 [Arthrospira maxima CS-328] Length = 442 Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust. Identities = 24/69 (34%), Positives = 37/69 (53%), Gaps = 1/69 (1%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV-SERFDTLQSDWFS 159 ILD G G+G LAL +P K VG+DIS K++E ++ +G+ + F + + Sbjct: 62 ILDAGCGSGYKALALALANPGAKIVGIDISEKSVEASRDRLKYHGIENAEFHAMYIEELP 121 Query: 160 SVEGLFDVI 168 S+ FD I Sbjct: 122 SLGWEFDYI 130 >gi|315230888|ref|YP_004071324.1| TrmA-like RNA methyltransferase [Thermococcus barophilus MP] gi|315183916|gb|ADT84101.1| TrmA-like RNA methyltransferase [Thermococcus barophilus MP] Length = 420 Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust. Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 4/74 (5%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 +ILDL +G G + L K FK GV+ + A+E+A NA NGV F +++ Sbjct: 283 KILDLYSGLGTFGIWLAKRG--FKVEGVEANPFAVEMANKNAKLNGVDAVFRLGKAE--E 338 Query: 160 SVEGLFDVIVSNPP 173 + G +D V +PP Sbjct: 339 TAIGDYDTAVVDPP 352 >gi|169794820|ref|YP_001712613.1| ribosomal RNA small subunit methyltransferase C (rRNA (guanine-N(2)-)-methyltransferase) (16S rRNA m2G1207 methyltransferase) [Acinetobacter baumannii AYE] gi|215482367|ref|YP_002324549.1| Ribosomal RNA small subunit methyltransferase C [Acinetobacter baumannii AB307-0294] gi|301345439|ref|ZP_07226180.1| Ribosomal RNA small subunit methyltransferase C [Acinetobacter baumannii AB056] gi|301510342|ref|ZP_07235579.1| Ribosomal RNA small subunit methyltransferase C [Acinetobacter baumannii AB058] gi|301595020|ref|ZP_07240028.1| Ribosomal RNA small subunit methyltransferase C [Acinetobacter baumannii AB059] gi|226712932|sp|B7GWT8|RSMC_ACIB3 RecName: Full=Ribosomal RNA small subunit methyltransferase C; AltName: Full=16S rRNA m2G1207 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rsmC gi|226712981|sp|B0V4Z1|RSMC_ACIBY RecName: Full=Ribosomal RNA small subunit methyltransferase C; AltName: Full=16S rRNA m2G1207 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rsmC gi|169147747|emb|CAM85610.1| ribosomal RNA small subunit methyltransferase C (rRNA (guanine-N(2)-)-methyltransferase) (16S rRNA m2G1207 methyltransferase) [Acinetobacter baumannii AYE] gi|213987470|gb|ACJ57769.1| Ribosomal RNA small subunit methyltransferase C [Acinetobacter baumannii AB307-0294] Length = 337 Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust. Identities = 34/135 (25%), Positives = 54/135 (40%), Gaps = 3/135 (2%) Query: 47 KHESIHRILGWRDFYNVRLTLSSDTFEPRPE--TELLVDSALAFSLPRIEKRDVVRILDL 104 K E I + W Y V++ T P ++ +D A LP + + RI D Sbjct: 142 KIEKIKPLESWLKTYTVQVNGQELTICALPGVFSQTHLDVGTAVLLPYLNQVKSGRIADF 201 Query: 105 GTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV-SERFDTLQSDWFSSVEG 163 G G G + L K + +DI AL+ + NG+ S++ + Sbjct: 202 GCGAGIISCYLAKANSSNIIHALDIDAFALQSTEMTFSRNGIGSDQLRLQPVTGIADAPT 261 Query: 164 LFDVIVSNPPYIESV 178 D IVSNPP+ + + Sbjct: 262 ELDAIVSNPPFHQGI 276 >gi|90581289|ref|ZP_01237086.1| ribosomal protein L11 methyltransferase [Vibrio angustum S14] gi|90437528|gb|EAS62722.1| ribosomal protein L11 methyltransferase [Vibrio angustum S14] Length = 294 Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust. Identities = 37/131 (28%), Positives = 63/131 (48%), Gaps = 26/131 (19%) Query: 74 PRP-ETELLVDSALAFS----------LPRIEKRDVV--RILDLGTGTGAVCLALLKESP 120 P P +L+D LAF L ++ +D+ ++D G G+G + +A LK Sbjct: 123 PEPGAVNVLLDPGLAFGTGTHPTTSLCLEWLDSQDLTGKTVIDFGCGSGILAIAALKLG- 181 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFSSVEGLFDVIVSN-------- 171 K +G+DI +A+ ++ NA NGVS+ + L D ++ DV+V+N Sbjct: 182 AAKVIGIDIDPQAILASRDNAERNGVSDNLELYLPQDQPQGIQA--DVVVANILAGPLRE 239 Query: 172 -PPYIESVIVD 181 P I+S++ D Sbjct: 240 LSPVIKSLVKD 250 >gi|302760487|ref|XP_002963666.1| hypothetical protein SELMODRAFT_79357 [Selaginella moellendorffii] gi|300168934|gb|EFJ35537.1| hypothetical protein SELMODRAFT_79357 [Selaginella moellendorffii] Length = 262 Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust. Identities = 35/119 (29%), Positives = 58/119 (48%), Gaps = 15/119 (12%) Query: 69 SDTFEPRPETELLVDSALA--FSLPRIEKRDVVRILDLGTGTGAV----CLALLKESPFF 122 +D +EP ++ LVD+ LA L ++ + +++G G+G V L L E Sbjct: 12 ADVYEPCDDSFALVDALLADRSHLAELQPK---LCMEIGCGSGYVISSLALMLRDEVESS 68 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIES 177 + V DI+ A E +GVS D +++D S +E G D++V NPPY+ + Sbjct: 69 QYVATDINQAATETTLETLKAHGVSA--DVVRTDLVSGLERRLAGSVDLLVFNPPYVPT 125 >gi|255024124|ref|ZP_05296110.1| hypothetical protein LmonocyFSL_12983 [Listeria monocytogenes FSL J1-208] Length = 299 Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust. Identities = 22/52 (42%), Positives = 31/52 (59%), Gaps = 3/52 (5%) Query: 125 VGVDISCKALEIAKSNAVTNGVSE--RFDTLQSDWFSSVEGLFDVIVSNPPY 174 +G DI + +EIAK NAV G+ + F LQ F + E + V+V+NPPY Sbjct: 248 IGGDIDARLIEIAKQNAVEAGLGDLITFRQLQVADFQT-EDKYGVVVANPPY 298 >gi|229021766|ref|ZP_04178344.1| Type I restriction-modification system, M subunit [Bacillus cereus AH1272] gi|228739513|gb|EEL89931.1| Type I restriction-modification system, M subunit [Bacillus cereus AH1272] Length = 402 Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust. Identities = 22/84 (26%), Positives = 42/84 (50%), Gaps = 4/84 (4%) Query: 95 KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS-ERFDTL 153 K ++ + D G+G++ L + KE+ + G + +A+ N + + + +RFD Sbjct: 109 KTEIKDVYDGTCGSGSLLLRVGKEAKVYNYYGQEKVSTTYNLARMNMLLHDIPYQRFDIK 168 Query: 154 QSDWFSSVEGL---FDVIVSNPPY 174 +D + L F+ IV+NPPY Sbjct: 169 NADTLEEPQHLDKRFEAIVANPPY 192 >gi|15644141|ref|NP_229190.1| ubiquinone/menaquinone biosynthesis methyltransferase-related protein [Thermotoga maritima MSB8] gi|4981950|gb|AAD36459.1|AE001791_21 ubiquinone/menaquinone biosynthesis methyltransferase-related protein [Thermotoga maritima MSB8] Length = 248 Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust. Identities = 39/121 (32%), Positives = 61/121 (50%), Gaps = 14/121 (11%) Query: 53 RILGWRDFYNVRLTLSSDTFEPRPETEL---LVDSALAFSLPRIEKRDVVRILDLGTGTG 109 ++ W +FY+ R+ + D+ P+ +L L+ S L L ++ R+LDLG GTG Sbjct: 2 KLRSW-EFYD-RIARAYDSMYETPKWKLYHRLIGSFLEEYL-----KNPCRVLDLGGGTG 54 Query: 110 AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL--QSDWFSSVEGLFDV 167 L L + F+ V VD S + LE+A+ V N V + + L S F +V L DV Sbjct: 55 KWSLFLQERG--FEVVLVDPSKEMLEVAREKGVKNVVEAKAEDLPFPSGAFEAVLALGDV 112 Query: 168 I 168 + Sbjct: 113 L 113 >gi|121996838|ref|YP_001001625.1| 23S rRNA 5-methyluridine methyltransferase [Halorhodospira halophila SL1] gi|121588243|gb|ABM60823.1| 23S rRNA m(5)U-1939 methyltransferase [Halorhodospira halophila SL1] Length = 434 Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust. Identities = 30/96 (31%), Positives = 45/96 (46%), Gaps = 9/96 (9%) Query: 81 LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140 +V+ AL + P+ +R ILDL G G L L +E G+ D + +E A+ N Sbjct: 277 MVERALEWLQPQSGRR----ILDLFCGVGNFTLPLAREGATVTGIEGDP--RLVERAEEN 330 Query: 141 AVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPP 173 A NG+ F D + V G FD ++ +PP Sbjct: 331 AAANGLHADFAVADLATEEGTRRVAGGFDAVLLDPP 366 >gi|323348128|gb|EGA82382.1| YIL064W-like protein [Saccharomyces cerevisiae Lalvin QA23] Length = 249 Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust. Identities = 45/185 (24%), Positives = 85/185 (45%), Gaps = 22/185 (11%) Query: 69 SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128 SD+ + + LVD+ A+ RI + ++DLGTG G + L + K VG+D Sbjct: 62 SDSDAEQKMIDFLVDNIGAY---RISEN--ASVVDLGTGNGHMLFELHQTEFQGKLVGID 116 Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSS--VEGLFDVIVSNPPYIESVIVDCLGLE 186 S +++++A + A GV Q+D FS G +D++ ++ +D + L Sbjct: 117 YSEESVKLASNIAEATGVDNFISFQQADIFSGDWNPGKYDIV------LDKGTLDAISL- 169 Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246 + ++G +D + Y + V + L KDG+ + + ++V+I E+ L + Sbjct: 170 -----SGMKINGKLDVVDVYAGV---VEKILEKDGIFLITSCNFTQDELVKIIETDNLKM 221 Query: 247 VNAFK 251 K Sbjct: 222 WKTIK 226 >gi|237725460|ref|ZP_04555941.1| RNA methyltransferase [Bacteroides sp. D4] gi|229436147|gb|EEO46224.1| RNA methyltransferase [Bacteroides dorei 5_1_36/D4] Length = 473 Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust. Identities = 30/104 (28%), Positives = 53/104 (50%), Gaps = 17/104 (16%) Query: 83 DSALAFSLPRIEKRDVVR------ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136 +S A++L ++ R+ R + DL TGTG + + +++ K +G++ +A+E Sbjct: 306 NSGQAYNLYKV-ARNFARLTGNELVYDLYTGTGTIANFVSRQAK--KVIGIEYVPEAIED 362 Query: 137 AKSNAVTNGVSERF-------DTLQSDWFSSVEGLFDVIVSNPP 173 AK N+ NG+ D L + F S G DVI+++PP Sbjct: 363 AKVNSAINGIDNTLFYAGDMKDILTQE-FISQHGRPDVIITDPP 405 >gi|170759978|ref|YP_001785391.1| hypothetical protein CLK_3237 [Clostridium botulinum A3 str. Loch Maree] gi|169406967|gb|ACA55378.1| conserved hypothetical protein [Clostridium botulinum A3 str. Loch Maree] Length = 246 Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust. Identities = 23/98 (23%), Positives = 49/98 (50%), Gaps = 8/98 (8%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 +D+ L + P I ++ +++DL +GTG + L ++ +G++I + ++A + Sbjct: 32 IDAVLLANFPTI--KNGAKVVDLCSGTGIIPFILAGKTNASNIIGIEIQKEIADMANRSI 89 Query: 142 VTNGVSERFDTLQSD-----WFSSVEGLFDVIVSNPPY 174 N + E+ ++ D +E + DV+ NPPY Sbjct: 90 KYNNLQEKVKFIEGDLKNLKLLKDIEKV-DVVTVNPPY 126 >gi|168181163|ref|ZP_02615827.1| conserved hypothetical protein [Clostridium botulinum NCTC 2916] gi|226947286|ref|YP_002802377.1| hypothetical protein CLM_0103 [Clostridium botulinum A2 str. Kyoto] gi|182667993|gb|EDT79972.1| conserved hypothetical protein [Clostridium botulinum NCTC 2916] gi|226844213|gb|ACO86879.1| conserved hypothetical protein [Clostridium botulinum A2 str. Kyoto] Length = 246 Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust. Identities = 23/98 (23%), Positives = 49/98 (50%), Gaps = 8/98 (8%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 +D+ L + P I ++ +++DL +GTG + L ++ +G++I + ++A + Sbjct: 32 IDAVLLANFPTI--KNGAKVVDLCSGTGIIPFILAGKTNASNIIGIEIQKEIADMANRSI 89 Query: 142 VTNGVSERFDTLQSD-----WFSSVEGLFDVIVSNPPY 174 N + E+ ++ D +E + DV+ NPPY Sbjct: 90 KYNNLQEKVKFIEGDLKNLKLLKDIEKV-DVVTVNPPY 126 >gi|163755043|ref|ZP_02162164.1| hypothetical protein KAOT1_03477 [Kordia algicida OT-1] gi|161325110|gb|EDP96438.1| hypothetical protein KAOT1_03477 [Kordia algicida OT-1] Length = 470 Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust. Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 8/79 (10%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER------FDTLQ 154 + DL TGTG + + K++ K +GV+ +A+E AK NA N ++ + Sbjct: 326 VYDLYTGTGTIAQFVSKKAK--KVIGVESVPEAIEAAKENAAFNNITNTEFFVGDMKKVF 383 Query: 155 SDWFSSVEGLFDVIVSNPP 173 + F G DVI+++PP Sbjct: 384 NAEFIETHGTPDVIITDPP 402 >gi|15605998|ref|NP_213375.1| hypothetical protein aq_533 [Aquifex aeolicus VF5] gi|2983178|gb|AAC06779.1| hypothetical protein aq_533 [Aquifex aeolicus VF5] Length = 380 Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust. Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 3/77 (3%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS-DWF 158 R+LDL +G + K VGVDI+ +A+E+A+ NA N V F + D+ Sbjct: 213 RVLDLFCYSGGFSVYCANRGA--KVVGVDINKRAVELARENAKLNSVKADFVLGNAFDFI 270 Query: 159 SSVEGLFDVIVSNPPYI 175 + +D+I+++PP I Sbjct: 271 QESKEEWDLIIADPPAI 287 >gi|145628085|ref|ZP_01783886.1| ribosomal protein L11 methyltransferase [Haemophilus influenzae 22.1-21] gi|145630071|ref|ZP_01785853.1| ribosomal protein L11 methyltransferase [Haemophilus influenzae R3021] gi|145632363|ref|ZP_01788098.1| ribosomal protein L11 methyltransferase [Haemophilus influenzae 3655] gi|145634154|ref|ZP_01789865.1| ribosomal protein L11 methyltransferase [Haemophilus influenzae PittAA] gi|145638200|ref|ZP_01793810.1| ribosomal protein L11 methyltransferase [Haemophilus influenzae PittII] gi|148826374|ref|YP_001291127.1| ribosomal protein L11 methyltransferase [Haemophilus influenzae PittEE] gi|148828153|ref|YP_001292906.1| ribosomal protein L11 methyltransferase [Haemophilus influenzae PittGG] gi|229843963|ref|ZP_04464104.1| ribosomal protein L11 methyltransferase [Haemophilus influenzae 6P18H1] gi|229846036|ref|ZP_04466148.1| ribosomal protein L11 methyltransferase [Haemophilus influenzae 7P49H1] gi|260581943|ref|ZP_05849739.1| ribosomal protein L11 methyltransferase [Haemophilus influenzae NT127] gi|166223416|sp|A5UD93|PRMA_HAEIE RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11 Mtase gi|166223417|sp|A5UIB7|PRMA_HAEIG RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11 Mtase gi|144979860|gb|EDJ89519.1| ribosomal protein L11 methyltransferase [Haemophilus influenzae 22.1-21] gi|144984352|gb|EDJ91775.1| ribosomal protein L11 methyltransferase [Haemophilus influenzae R3021] gi|144987270|gb|EDJ93800.1| ribosomal protein L11 methyltransferase [Haemophilus influenzae 3655] gi|145268598|gb|EDK08591.1| ribosomal protein L11 methyltransferase [Haemophilus influenzae PittAA] gi|145272529|gb|EDK12436.1| ribosomal protein L11 methyltransferase [Haemophilus influenzae PittII] gi|148716534|gb|ABQ98744.1| ribosomal protein L11 methyltransferase [Haemophilus influenzae PittEE] gi|148719395|gb|ABR00523.1| ribosomal protein L11 methyltransferase [Haemophilus influenzae PittGG] gi|229811040|gb|EEP46757.1| ribosomal protein L11 methyltransferase [Haemophilus influenzae 7P49H1] gi|229812957|gb|EEP48645.1| ribosomal protein L11 methyltransferase [Haemophilus influenzae 6P18H1] gi|260095136|gb|EEW79028.1| ribosomal protein L11 methyltransferase [Haemophilus influenzae NT127] gi|301169703|emb|CBW29304.1| methylase for 50S ribosomal subunit protein L11 [Haemophilus influenzae 10810] gi|309751356|gb|ADO81340.1| Ribosomal protein L11 methyltransferase [Haemophilus influenzae R2866] gi|309973522|gb|ADO96723.1| Ribosomal protein L11 methyltransferase [Haemophilus influenzae R2846] Length = 295 Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust. Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 2/71 (2%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 ++D G G+G + +A LK VG+DI +A+ +++NA NGV++R SD S Sbjct: 162 VIDFGCGSGILAIAALKLGAK-SAVGIDIDPQAILASRNNAEQNGVADRLQLFLSDEKPS 220 Query: 161 VEGLFDVIVSN 171 + DV+V+N Sbjct: 221 -DLKADVVVAN 230 >gi|331085068|ref|ZP_08334155.1| RsmD family RNA methyltransferase [Lachnospiraceae bacterium 9_1_43BFAA] gi|330408768|gb|EGG88233.1| RsmD family RNA methyltransferase [Lachnospiraceae bacterium 9_1_43BFAA] Length = 189 Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust. Identities = 32/117 (27%), Positives = 53/117 (45%), Gaps = 10/117 (8%) Query: 64 RLTLSS-DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 RL L + D + RP T+ + ++ P + R LDL G+G + + L Sbjct: 10 RLQLKTLDGLDTRPTTDRIKETLFNMISPYLYD---CRFLDLFAGSGGIGIEALSRGAG- 65 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-----EGLFDVIVSNPPY 174 + V V+ + KA+ K N + ER T+ +D +++ G FD I +PPY Sbjct: 66 EAVFVEQNPKAMACIKENLKKTKLEERAVTMATDVMTALRRMEGSGTFDYIFMDPPY 122 >gi|218674489|ref|ZP_03524158.1| ribosomal protein L11 methyltransferase [Rhizobium etli GR56] Length = 288 Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust. Identities = 26/76 (34%), Positives = 37/76 (48%), Gaps = 9/76 (11%) Query: 102 LDLGTGTGAVCLAL--LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 LDLGTG+G + +A+ LK P DI A +A N NG++ T + F Sbjct: 152 LDLGTGSGVLAIAVRKLKNIPVL---ATDIDPIATRVAAENVRRNGIASGIATRTAPGFH 208 Query: 160 SV----EGLFDVIVSN 171 S G FD+I++N Sbjct: 209 STAFSEHGPFDLIIAN 224 >gi|218281999|ref|ZP_03488311.1| hypothetical protein EUBIFOR_00880 [Eubacterium biforme DSM 3989] gi|218216986|gb|EEC90524.1| hypothetical protein EUBIFOR_00880 [Eubacterium biforme DSM 3989] Length = 521 Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust. Identities = 26/97 (26%), Positives = 44/97 (45%), Gaps = 6/97 (6%) Query: 84 SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143 S L L + K + + D G+G++ L + KE+ G + +A+ N + Sbjct: 213 SKLLAKLVTVGKSKLKNVYDPTCGSGSLLLRVAKETDVVSFYGQEKVSTTYNLARMNMLL 272 Query: 144 NGVS------ERFDTLQSDWFSSVEGLFDVIVSNPPY 174 +GV E DTL+ ++ FD +V+NPPY Sbjct: 273 HGVPFNHFDIENNDTLEHPNEEHMKMRFDAVVANPPY 309 >gi|207092295|ref|ZP_03240082.1| type I restriction enzyme M protein [Helicobacter pylori HPKX_438_AG0C1] Length = 543 Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust. Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 21/96 (21%) Query: 94 EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD--------ISCKALEIAKSNAVTNG 145 E V+I D GTG + +AL + +G D IS K+L + K N + N Sbjct: 226 EPTQSVKIYDPSAGTGTLLMALAHQ------IGTDSCTLYAQDISQKSLRMLKLNLILND 279 Query: 146 VSERF------DTLQSDWFSS-VEGLFDVIVSNPPY 174 ++ +TL + + S +G D IVSNPP+ Sbjct: 280 LTHSLKNAIEGNTLTNPYHSKDYKGKMDYIVSNPPF 315 >gi|71033081|ref|XP_766182.1| hypothetical protein [Theileria parva strain Muguga] gi|68353139|gb|EAN33899.1| hypothetical protein TP01_0661 [Theileria parva] Length = 627 Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust. Identities = 18/64 (28%), Positives = 36/64 (56%), Gaps = 2/64 (3%) Query: 96 RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155 R+ +R++D +G G + + F +GV+++ K +EI K N ++ GV +D + Sbjct: 279 RNDIRVIDAFSGIGGNLIPFINN--FNYSLGVELNKKRVEICKDNILSYGVKNPYDLIHD 336 Query: 156 DWFS 159 D+F+ Sbjct: 337 DFFN 340 >gi|315023819|gb|EFT36821.1| Mannose-1-phosphate guanylyltransferase (GDP) [Riemerella anatipestifer RA-YM] Length = 351 Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust. Identities = 26/94 (27%), Positives = 46/94 (48%), Gaps = 3/94 (3%) Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI-GYNQ 231 P E + +D +E D I D G L + ++ D ++ ++ + S I YN Sbjct: 233 PKAEKISIDNGIMEKADNVYVIPADLGWSDLGTWNSVYDNAEKNDEQNSINSKYILTYNS 292 Query: 232 KVDVVRIFESRKLFLVNAFKDY--GGNDRVLLFC 263 K +V+R+ ES KL +++ +DY ++ LL C Sbjct: 293 KGNVIRLKESNKLAIIDGLQDYIVVDTEKALLIC 326 >gi|301107107|ref|XP_002902636.1| trans-aconitate 2-methyltransferase, putative [Phytophthora infestans T30-4] gi|262098510|gb|EEY56562.1| trans-aconitate 2-methyltransferase, putative [Phytophthora infestans T30-4] Length = 285 Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust. Identities = 31/99 (31%), Positives = 42/99 (42%), Gaps = 10/99 (10%) Query: 75 RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134 RP ELL A P + D V I+DLG GTG + + K P VD S L Sbjct: 26 RPALELL---ARVSDFPTTDD-DSVEIIDLGAGTGNMAPSFQKRWPSAHVTFVDSSTSML 81 Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173 E+A+ N +TL + F+ V+ F+ P Sbjct: 82 EVAQQEHDEN------ETLNTQGFAYVQADFETYAPERP 114 >gi|257869714|ref|ZP_05649367.1| conserved hypothetical protein [Enterococcus gallinarum EG2] gi|257803878|gb|EEV32700.1| conserved hypothetical protein [Enterococcus gallinarum EG2] Length = 244 Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust. Identities = 31/121 (25%), Positives = 61/121 (50%), Gaps = 13/121 (10%) Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 ++++ SS+ F +D+ L + P I KR RI+DL G GAV L + +++ Sbjct: 15 DIKIIQSSEVFS------FSLDAVLLANFPTIPKRG--RIVDLCAGNGAVGLFISRKTSA 66 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW---FSSVEG-LFDVIVSNPPYIES 177 +++ + ++A+ + NG+ E+ D F+ ++ D++V NPPY ++ Sbjct: 67 HI-YQIELQDRLADMAQRSVSLNGLEEQITVYPMDLKNIFTKIKPDSVDLLVCNPPYFKN 125 Query: 178 V 178 V Sbjct: 126 V 126 >gi|228475400|ref|ZP_04060119.1| type I restriction-modification system, M subunit [Staphylococcus hominis SK119] gi|228270583|gb|EEK12015.1| type I restriction-modification system, M subunit [Staphylococcus hominis SK119] Length = 518 Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust. Identities = 29/114 (25%), Positives = 54/114 (47%), Gaps = 12/114 (10%) Query: 93 IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS----- 147 + K+D+ + D G+G++ L + +E+ + G + + +A+ N + + V+ Sbjct: 219 VNKKDIKSVYDPTCGSGSLLLRVGREANVRQYYGQEYNSTTYNLARMNMLLHDVNYANFK 278 Query: 148 -ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200 E DT++ S + F+ +V+NPPY D LE DPR S G + Sbjct: 279 IENGDTIEDPAIS--DERFEAVVANPPYSAKWSSDPQFLE----DPRFSNYGKL 326 >gi|226365254|ref|YP_002783037.1| hypothetical protein ROP_58450 [Rhodococcus opacus B4] gi|226243744|dbj|BAH54092.1| hypothetical protein [Rhodococcus opacus B4] Length = 261 Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust. Identities = 20/50 (40%), Positives = 28/50 (56%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150 +LD+G G G+V L + P VGVD S + +E A+S AV +G F Sbjct: 35 VLDVGCGDGSVTLRIADRLPRGSVVGVDASPRMIEKARSRAVPDGARAEF 84 >gi|221195076|ref|ZP_03568132.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Atopobium rimae ATCC 49626] gi|221184979|gb|EEE17370.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Atopobium rimae ATCC 49626] Length = 452 Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust. Identities = 28/83 (33%), Positives = 41/83 (49%), Gaps = 8/83 (9%) Query: 99 VRILDLGTGTGAVCLALLKESPF----FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154 +RILD GTG + + KE+ + +GVD + +AK NA N VS RF Sbjct: 288 LRILDAYCGTGTIGICAAKEAGSRGIPVELIGVDQVENNIAMAKRNARANAVSARFVCDD 347 Query: 155 SDWFSSVE----GLFDVIVSNPP 173 + F + E +DV+V +PP Sbjct: 348 ATRFIAQEAKRGAPYDVVVLDPP 370 >gi|160893394|ref|ZP_02074180.1| hypothetical protein CLOL250_00944 [Clostridium sp. L2-50] gi|156864969|gb|EDO58400.1| hypothetical protein CLOL250_00944 [Clostridium sp. L2-50] Length = 251 Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust. Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 7/81 (8%) Query: 102 LDLGTGTGAVCLALLKESP---FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW- 157 +DLGTGTG + + L + P + VG++I E+A + N + ++ D Sbjct: 49 MDLGTGTGVIPILLAAKEPPDGTCQFVGLEIQDACAEMAGKSVRLNDLEQKVRIDHGDIR 108 Query: 158 ---FSSVEGLFDVIVSNPPYI 175 + + FD++ SNPPYI Sbjct: 109 EVSCNYRKASFDIVTSNPPYI 129 >gi|28211797|ref|NP_782741.1| methyltransferase, putative 3-demethylubiquinone-9 3-methyltransferase [Clostridium tetani E88] gi|28204239|gb|AAO36678.1| methyltransferase, putative 3-demethylubiquinone-9 3-methyltransferase [Clostridium tetani E88] Length = 207 Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust. Identities = 18/49 (36%), Positives = 29/49 (59%) Query: 90 LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAK 138 + +++ + ILD+G GTG++ LL E K G+DIS + L +AK Sbjct: 40 IKKLKNLNFNTILDVGCGTGSILFLLLYEKENIKAYGLDISEEMLNVAK 88 >gi|332852274|ref|ZP_08434079.1| methyltransferase small domain protein [Acinetobacter baumannii 6013150] gi|332870497|ref|ZP_08439261.1| methyltransferase small domain protein [Acinetobacter baumannii 6013113] gi|332729404|gb|EGJ60744.1| methyltransferase small domain protein [Acinetobacter baumannii 6013150] gi|332732234|gb|EGJ63502.1| methyltransferase small domain protein [Acinetobacter baumannii 6013113] Length = 339 Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust. Identities = 34/135 (25%), Positives = 54/135 (40%), Gaps = 3/135 (2%) Query: 47 KHESIHRILGWRDFYNVRLTLSSDTFEPRPE--TELLVDSALAFSLPRIEKRDVVRILDL 104 K E I + W Y V++ T P ++ +D A LP + + RI D Sbjct: 144 KIEKIKPLESWLKTYTVQVNGQELTICALPGVFSQTHLDVGTAVLLPYLNQVKSGRIADF 203 Query: 105 GTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV-SERFDTLQSDWFSSVEG 163 G G G + L K + +DI AL+ + NG+ S++ + Sbjct: 204 GCGAGIISCYLAKANSSNIIHALDIDAFALQSTEMTFSRNGIGSDQLRLQPVTGIADAPT 263 Query: 164 LFDVIVSNPPYIESV 178 D IVSNPP+ + + Sbjct: 264 ELDAIVSNPPFHQGI 278 >gi|288941779|ref|YP_003444019.1| hypothetical protein Alvin_2065 [Allochromatium vinosum DSM 180] gi|288897151|gb|ADC62987.1| protein of unknown function Met10 [Allochromatium vinosum DSM 180] Length = 398 Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust. Identities = 22/53 (41%), Positives = 28/53 (52%), Gaps = 6/53 (11%) Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPP 173 VD S ALE +SNA NG+S R LQ D F + L FD ++ +PP Sbjct: 249 VDASADALERLQSNAERNGLSARVRPLQGDAFEVLRQLRDQGRRFDTVLLDPP 301 >gi|167042719|gb|ABZ07439.1| hypothetical protein ALOHA_HF4000ANIW133O4ctg2g17 [uncultured marine crenarchaeote HF4000_ANIW133O4] Length = 180 Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust. Identities = 39/135 (28%), Positives = 56/135 (41%), Gaps = 29/135 (21%) Query: 69 SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128 ++++ P +T L D I+ LD+GTG+G LA L E F VG D Sbjct: 8 AESYPPSEDTFFLAD--------YIKNEKGESALDIGTGSGY--LAALLEKSFSLVVGTD 57 Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVR 188 +S L+ K D L FD+++ N PY+++ E+ Sbjct: 58 LSFNVLKKQKYFTTNTVCCNGADALNQQ--------FDLVICNMPYLKTD-------EIL 102 Query: 189 DFDPRISLDGGIDGL 203 D IS DGG DGL Sbjct: 103 D----ISTDGGRDGL 113 >gi|190406281|gb|EDV09548.1| conserved hypothetical protein [Saccharomyces cerevisiae RM11-1a] gi|207344319|gb|EDZ71503.1| YIL064Wp-like protein [Saccharomyces cerevisiae AWRI1631] gi|259147194|emb|CAY80447.1| EC1118_1I12_1255p [Saccharomyces cerevisiae EC1118] gi|323333162|gb|EGA74562.1| YIL064W-like protein [Saccharomyces cerevisiae AWRI796] Length = 257 Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust. Identities = 45/185 (24%), Positives = 85/185 (45%), Gaps = 22/185 (11%) Query: 69 SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128 SD+ + + LVD+ A+ RI + ++DLGTG G + L + K VG+D Sbjct: 70 SDSDAEQKMIDFLVDNIGAY---RISEN--ASVVDLGTGNGHMLFELHQTEFQGKLVGID 124 Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSS--VEGLFDVIVSNPPYIESVIVDCLGLE 186 S +++++A + A GV Q+D FS G +D++ ++ +D + L Sbjct: 125 YSEESVKLASNIAEATGVDNFISFQQADIFSGDWNPGKYDIV------LDKGTLDAISL- 177 Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246 + ++G +D + Y + V + L KDG+ + + ++V+I E+ L + Sbjct: 178 -----SGMKINGKLDVVDVYAGV---VEKILEKDGIFLITSCNFTQDELVKIIETDNLKM 229 Query: 247 VNAFK 251 K Sbjct: 230 WKTIK 234 >gi|332796503|ref|YP_004458003.1| methylase [Acidianus hospitalis W1] gi|332694238|gb|AEE93705.1| methylase [Acidianus hospitalis W1] Length = 197 Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust. Identities = 29/118 (24%), Positives = 63/118 (53%), Gaps = 13/118 (11%) Query: 59 DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118 +F ++L ++ + +EP +TELL+ S+ +I+K + +++++G+G+G L+++ Sbjct: 8 EFNGIKLCINDEVYEPAEDTELLL------SIVKIKKGE--KVVEIGSGSG--ILSIISA 57 Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYI 175 K +DI+ A ++ N + D + D + + + FDV + NPPY+ Sbjct: 58 KMGGKVYSIDINPFASLATLCSSKLNNL--YIDVINCDMLTCLRNITFDVGIFNPPYL 113 >gi|332286437|ref|YP_004418348.1| putative S-adenosyl-L-methionine (SAM)-dependent methyltransferase [Pusillimonas sp. T7-7] gi|330430390|gb|AEC21724.1| putative S-adenosyl-L-methionine (SAM)-dependent methyltransferase [Pusillimonas sp. T7-7] Length = 226 Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust. Identities = 27/73 (36%), Positives = 33/73 (45%), Gaps = 7/73 (9%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 RILD G G G L K P + G D+S ++LEIA T L SDW Sbjct: 48 TTRILDFGCGAGRSLPYLAKHFPGSEIWGYDVSQESLEIASKREPT-------AHLFSDW 100 Query: 158 FSSVEGLFDVIVS 170 + FDVIV+ Sbjct: 101 TKIADINFDVIVA 113 >gi|327395458|dbj|BAK12880.1| ribosomal protein L11 methyltransferase PrmA [Pantoea ananatis AJ13355] Length = 294 Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust. Identities = 17/50 (34%), Positives = 32/50 (64%), Gaps = 1/50 (2%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150 ++D G G+G + +A LK + +G+DI +A++ ++ NA NGV++R Sbjct: 162 VIDFGCGSGILAIAALKLG-AAQAIGIDIDLQAIQASRDNAERNGVADRL 210 >gi|321460102|gb|EFX71148.1| hypothetical protein DAPPUDRAFT_216956 [Daphnia pulex] Length = 218 Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust. Identities = 31/125 (24%), Positives = 57/125 (45%), Gaps = 10/125 (8%) Query: 59 DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118 D ++ T + +EP ++ L++D AL +P I+ L++G+G+G V L K Sbjct: 9 DLSHLNSTDYENVYEPAEDSFLMLD-ALESEIPFIKSLKPTICLEIGSGSGIVLTGLAKC 67 Query: 119 ----SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT--LQSDWFSSVEGLFDVIVSNP 172 +F +DI+ A ++ + A N V L ++ D++V NP Sbjct: 68 LGSCCAYF---SIDINPHAAQVTRKTACKNSVCLEVVNCDLVGPLLPQIQNKVDMLVFNP 124 Query: 173 PYIES 177 PY+ + Sbjct: 125 PYVPT 129 >gi|239927778|ref|ZP_04684731.1| hypothetical protein SghaA1_06116 [Streptomyces ghanaensis ATCC 14672] gi|291436121|ref|ZP_06575511.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672] gi|291339016|gb|EFE65972.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672] Length = 300 Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust. Identities = 20/56 (35%), Positives = 29/56 (51%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 ++D G+G G + + P + V VD S LE A A GV++RFDTL + Sbjct: 60 VVDAGSGPGVISCLFAETFPGARIVAVDGSKPLLERAADRAARQGVADRFDTLAGE 115 >gi|229042277|ref|ZP_04190029.1| Type I restriction-modification system, M subunit [Bacillus cereus AH676] gi|228727068|gb|EEL78273.1| Type I restriction-modification system, M subunit [Bacillus cereus AH676] Length = 530 Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust. Identities = 23/90 (25%), Positives = 41/90 (45%), Gaps = 9/90 (10%) Query: 94 EKRDVVRILDLGTGTGAVCLAL---LKESPFFKGVGVDISCKALEIAKSNAVTNGVSER- 149 E + + + D G+G++ L + + K G +++ +AK N + +GV + Sbjct: 214 EDKKLFSVFDPTMGSGSLMLNIRNYINHPDSVKYHGQELNTTTYNLAKMNLILHGVDKED 273 Query: 150 -----FDTLQSDWFSSVEGLFDVIVSNPPY 174 DTL DW + FD ++ NPPY Sbjct: 274 MSLRNGDTLNKDWPTDEPYTFDSVLMNPPY 303 >gi|297201351|ref|ZP_06918748.1| transferase [Streptomyces sviceus ATCC 29083] gi|197712785|gb|EDY56819.1| transferase [Streptomyces sviceus ATCC 29083] Length = 508 Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust. Identities = 36/125 (28%), Positives = 54/125 (43%), Gaps = 16/125 (12%) Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 LDLGTG+G L + + + D++ +AL I +G + D + F V Sbjct: 173 LDLGTGSGIQALHAAQHA--TRVTATDLNPRALHITALTLALSG-APAADLREGSLFEPV 229 Query: 162 EG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 + +D+IVSNPP+ VI L R DGG+ G R++ G LN+ Sbjct: 230 KQGETYDLIVSNPPF---VISPGARLTYR--------DGGMGGDDLCRSVVQGAGELLNE 278 Query: 220 DGLCS 224 G Sbjct: 279 GGFAQ 283 >gi|37521085|ref|NP_924462.1| hypothetical protein glr1516 [Gloeobacter violaceus PCC 7421] gi|35212081|dbj|BAC89457.1| glr1516 [Gloeobacter violaceus PCC 7421] Length = 449 Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust. Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 1/70 (1%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV-SERFDTLQSDWF 158 RILD G G+G LAL + +P + VG+D+S +++ +A+ +G S F L + Sbjct: 65 RILDAGCGSGFTSLALAQANPGARIVGIDLSERSVAVARERLAFHGFKSAEFHALPIERV 124 Query: 159 SSVEGLFDVI 168 + FD+I Sbjct: 125 GELGEDFDLI 134 >gi|89072497|ref|ZP_01159069.1| hypothetical 16S RNA G1207 methylase RsmC [Photobacterium sp. SKA34] gi|89051601|gb|EAR57054.1| hypothetical 16S RNA G1207 methylase RsmC [Photobacterium sp. SKA34] Length = 340 Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust. Identities = 26/98 (26%), Positives = 49/98 (50%), Gaps = 12/98 (12%) Query: 78 TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137 +ELL+++ LP++ + +LD G G G + + + P DIS A+E A Sbjct: 189 SELLLNN-----LPKLHGK----VLDFGCGAGVIGAVMKAKYPTIDLELCDISALAIESA 239 Query: 138 KSNAVTNGV-SERFDTLQSDWFSSVEGLFDVIVSNPPY 174 K N + + +F +D + ++ G + ++SNPP+ Sbjct: 240 KETFKVNNLDASKFTA--TDVYKTLTGPYQFLISNPPF 275 >gi|82539478|ref|XP_724124.1| hypothetical protein [Plasmodium yoelii yoelii str. 17XNL] gi|23478663|gb|EAA15689.1| hypothetical protein [Plasmodium yoelii yoelii] Length = 227 Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust. Identities = 47/162 (29%), Positives = 71/162 (43%), Gaps = 22/162 (13%) Query: 68 SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL-----KESPFF 122 SSDTF E L D A S +V +L++GTG+G + L L K Sbjct: 28 SSDTF---VFAEALEDDAETIS------SNVNMVLEMGTGSGYLILFLYELLLKKNKRID 78 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIESVIV 180 +DI+ A ++ NG+S + + SD F+++ G FD+I+ NPPY+E+ Sbjct: 79 LLYCIDINKDACNCVQNAINLNGIS-NVEIINSDLFNNLRKCGQFDIILFNPPYVETE-- 135 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL 222 E+ D S GG G V HL+ +G+ Sbjct: 136 ---QDEMNKTDIVASYAGGKHGREVILKFLHTVYDHLSNNGI 174 >gi|332521493|ref|ZP_08397947.1| RNA methyltransferase, TrmA family [Lacinutrix algicola 5H-3-7-4] gi|332042892|gb|EGI79091.1| RNA methyltransferase, TrmA family [Lacinutrix algicola 5H-3-7-4] Length = 470 Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust. Identities = 25/79 (31%), Positives = 38/79 (48%), Gaps = 8/79 (10%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE------RFDTLQ 154 + DL TGTG + + K++ K VGV+ A+ AK NA NG+ + Sbjct: 327 VYDLYTGTGTIAQFVAKQAK--KVVGVEAVPDAITAAKENAQLNGIDNVSFFVGDMKNVF 384 Query: 155 SDWFSSVEGLFDVIVSNPP 173 + F G DVI+++PP Sbjct: 385 NQEFIETHGQPDVIITDPP 403 >gi|325264034|ref|ZP_08130766.1| methyltransferase, UbiE/COQ5 family [Clostridium sp. D5] gi|324030518|gb|EGB91801.1| methyltransferase, UbiE/COQ5 family [Clostridium sp. D5] Length = 381 Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust. Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 2/89 (2%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 ++ILD+GT TG +A++ S K VDIS L+ A+S A +G S F + + Sbjct: 51 LKILDIGTATGF--MAIVCASLGHKVTAVDISRHMLKRARSAAAESGFSVTFLQMDAHQL 108 Query: 159 SSVEGLFDVIVSNPPYIESVIVDCLGLEV 187 G FDV++ + C+ +E+ Sbjct: 109 DFPSGSFDVVICRSTIWTILDPRCVYMEI 137 >gi|242398179|ref|YP_002993603.1| Cyclopropane-fatty-acyl-phospholipid synthase superfamily [Thermococcus sibiricus MM 739] gi|242264572|gb|ACS89254.1| Cyclopropane-fatty-acyl-phospholipid synthase superfamily [Thermococcus sibiricus MM 739] Length = 245 Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust. Identities = 35/116 (30%), Positives = 51/116 (43%), Gaps = 14/116 (12%) Query: 57 WRDFYNVRLTL---SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113 W +F++ + T + E + L++ F LP + +ILD+G G G L Sbjct: 6 WEEFFDREADYYLQEAFTKHTKKEIDFLLEE---FKLP-----EGAKILDVGCGVGRHSL 57 Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIV 169 L K ++ GVDIS K LE A+ A GV F + F+ E FD V Sbjct: 58 ELAKRG--YRVTGVDISQKMLEKAEERAQKEGVEVEFIKADATKFARNEK-FDAAV 110 >gi|237709870|ref|ZP_04540351.1| RNA methyltransferase [Bacteroides sp. 9_1_42FAA] gi|229455963|gb|EEO61684.1| RNA methyltransferase [Bacteroides sp. 9_1_42FAA] Length = 473 Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust. Identities = 30/104 (28%), Positives = 53/104 (50%), Gaps = 17/104 (16%) Query: 83 DSALAFSLPRIEKRDVVR------ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136 +S A++L ++ R+ R + DL TGTG + + +++ K +G++ +A+E Sbjct: 306 NSGQAYNLYKV-ARNFARLTGNELVYDLYTGTGTIANFVSRQAK--KVIGIEYVPEAIED 362 Query: 137 AKSNAVTNGVSERF-------DTLQSDWFSSVEGLFDVIVSNPP 173 AK N+ NG+ D L + F S G DVI+++PP Sbjct: 363 AKVNSAINGIDNTLFYAGDMKDILTQE-FISQHGRPDVIITDPP 405 >gi|269213887|ref|ZP_06158240.1| ribosomal protein L11 methyltransferase [Neisseria cinerea ATCC 14685] gi|269145275|gb|EEZ71693.1| ribosomal protein L11 methyltransferase [Neisseria cinerea ATCC 14685] Length = 139 Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust. Identities = 28/74 (37%), Positives = 39/74 (52%), Gaps = 11/74 (14%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDW 157 +LD G G+G + +A LK VGVDI +A+ +K NA N V +F D L Sbjct: 11 VLDYGCGSGILTIASLKLGAG-SAVGVDIDEQAIRASKDNAEQNNVDAQFFLPDGLP--- 66 Query: 158 FSSVEGLFDVIVSN 171 +G FDV+V+N Sbjct: 67 ----QGQFDVVVAN 76 >gi|332558075|ref|ZP_08412397.1| SAM-dependent methyltransferase [Rhodobacter sphaeroides WS8N] gi|332275787|gb|EGJ21102.1| SAM-dependent methyltransferase [Rhodobacter sphaeroides WS8N] Length = 396 Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust. Identities = 18/53 (33%), Positives = 32/53 (60%), Gaps = 6/53 (11%) Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIV 169 + + VD S AL +A++ A G+ +RF+T Q+D F ++E L FD+++ Sbjct: 245 RALAVDASGPALALAEAGAKLAGLGDRFETRQADAFQALEALGAEGARFDLVI 297 >gi|325661177|ref|ZP_08149804.1| RsmD family RNA methyltransferase [Lachnospiraceae bacterium 4_1_37FAA] gi|325472684|gb|EGC75895.1| RsmD family RNA methyltransferase [Lachnospiraceae bacterium 4_1_37FAA] Length = 189 Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust. Identities = 32/117 (27%), Positives = 53/117 (45%), Gaps = 10/117 (8%) Query: 64 RLTLSS-DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 RL L + D + RP T+ + ++ P + R LDL G+G + + L Sbjct: 10 RLQLKTLDGLDTRPTTDRIKETLFNMISPYLYD---CRFLDLFAGSGGIGIEALSRGAG- 65 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-----EGLFDVIVSNPPY 174 + V V+ + KA+ K N + ER T+ +D +++ G FD I +PPY Sbjct: 66 EAVFVEQNPKAMACIKENLKKTKLEERAVTMTTDVMTALRRMEGSGTFDYIFMDPPY 122 >gi|323345539|ref|ZP_08085762.1| ribosomal protein L11 methyltransferase [Prevotella oralis ATCC 33269] gi|323093653|gb|EFZ36231.1| ribosomal protein L11 methyltransferase [Prevotella oralis ATCC 33269] Length = 305 Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust. Identities = 37/117 (31%), Positives = 58/117 (49%), Gaps = 19/117 (16%) Query: 64 RLTLSSDTFEP----RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119 ++T+ DT + ET ++ SAL ++ EKR ILD G GTG + +A LK Sbjct: 135 KITIGIDTKQAFGTGTHETTRMIISAL-LTIDIKEKR----ILDCGCGTGILGIAALKLG 189 Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ-----SDWFSSVEGLFDVIVSN 171 + VG DI ++ +K NA N R D +Q + V G+FD++++N Sbjct: 190 A-AQAVGYDIDEWSVNNSKHNAQIN----RIDNMQVLHGNVHVLTHVNGIFDIVLAN 241 >gi|253988778|ref|YP_003040134.1| hypothetical protein PAU_01297 [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253780228|emb|CAQ83389.1| conserved hypothetical protein [Photorhabdus asymbiotica] Length = 244 Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust. Identities = 37/137 (27%), Positives = 60/137 (43%), Gaps = 13/137 (9%) Query: 97 DVVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQ- 154 D ILD+G G+G + L L + + + V++ A A+ N + + + Sbjct: 43 DKKAILDIGCGSGLIALMLAQRTDKNTKIDAVELDINAAFQAQENVEQSPWRRKVNVYHQ 102 Query: 155 --SDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212 +D+ +D+IVSNPPY E I C E R+ R + L+H R + D Sbjct: 103 DINDFADRYSQCYDLIVSNPPYFEPAIA-CRN-EARE-QARYT-----GSLTHQRLLQDA 154 Query: 213 VSRHLNKDGLCSVEIGY 229 + + DGL V + Y Sbjct: 155 -EKLITPDGLFCVVLPY 170 >gi|254172832|ref|ZP_04879506.1| 23S rRNA (uracil-5-)-methyltransferase [Thermococcus sp. AM4] gi|214032988|gb|EEB73816.1| 23S rRNA (uracil-5-)-methyltransferase [Thermococcus sp. AM4] Length = 418 Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust. Identities = 33/113 (29%), Positives = 54/113 (47%), Gaps = 5/113 (4%) Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPR-IEKR-DVVRILDLGTGTGAVCLALLKESP 120 +R L + P + +S A L R + KR D R+LDL +G G + L K Sbjct: 242 IREELDGTLYLIHPNSFFQTNSYGAVELLREVAKRVDGERVLDLYSGVGTFGVYLAKRG- 300 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173 F+ G++I+ A+++A NA NGV+ F S+ +D ++ +PP Sbjct: 301 -FRVEGIEINPFAVKMANRNAELNGVNASFRVGADRDVESLRA-YDTVIVDPP 351 >gi|116629813|ref|YP_814985.1| N6-adenine-specific methylase [Lactobacillus gasseri ATCC 33323] gi|282851681|ref|ZP_06261046.1| RNA methyltransferase, RsmD family [Lactobacillus gasseri 224-1] gi|116095395|gb|ABJ60547.1| N6-adenine-specific methylase [Lactobacillus gasseri ATCC 33323] gi|282557649|gb|EFB63246.1| RNA methyltransferase, RsmD family [Lactobacillus gasseri 224-1] Length = 182 Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust. Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 7/90 (7%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ-SD-- 156 ++LDL G+GA+ + + + V VDIS +A +I + N +RF L+ SD Sbjct: 44 QVLDLYAGSGALGIEAVSRG-YDSAVLVDISGQACQIIRKNVELTKEEDRFRVLKCSDNR 102 Query: 157 ---WFSSVEGLFDVIVSNPPYIESVIVDCL 183 + E FD+I +PPY + IV + Sbjct: 103 AIKILNEEEKKFDLIFLDPPYAKQKIVKIM 132 >gi|332673287|gb|AEE70104.1| type I restriction enzyme M protein [Helicobacter pylori 83] Length = 487 Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust. Identities = 28/90 (31%), Positives = 44/90 (48%), Gaps = 9/90 (10%) Query: 94 EKRDVVRILDLGTGTGAVCLALLKE--SPFFKGVGVDISCKALEIAKSNAVTNGVSERF- 150 E V+I D GTG + +AL + + DIS K+L++ K N + N ++ Sbjct: 226 EPTQNVKIYDPSAGTGTLLMALAHQIGTNSCTLYAQDISQKSLKMLKLNLILNDLTHSLK 285 Query: 151 -----DTLQSDWFSS-VEGLFDVIVSNPPY 174 +TL + + S +G D IVSNPP+ Sbjct: 286 YAIEGNTLTNPYHSKECKGRMDYIVSNPPF 315 >gi|329955143|ref|ZP_08296100.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Bacteroides clarus YIT 12056] gi|328526142|gb|EGF53161.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Bacteroides clarus YIT 12056] Length = 475 Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust. Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 10/80 (12%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF-------DTL 153 + DL TGTG + + K++ + +G++ +A+E AK NA NG+ D L Sbjct: 329 VYDLYTGTGTIANFVSKQAR--QVIGIEYVPEAIEDAKVNAEINGIKNTLFFAGDMKDML 386 Query: 154 QSDWFSSVEGLFDVIVSNPP 173 D+ + G DVI+++PP Sbjct: 387 TQDFINEY-GRPDVIITDPP 405 >gi|328953121|ref|YP_004370455.1| O-methyltransferase family 2 [Desulfobacca acetoxidans DSM 11109] gi|328453445|gb|AEB09274.1| O-methyltransferase family 2 [Desulfobacca acetoxidans DSM 11109] Length = 339 Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust. Identities = 18/69 (26%), Positives = 36/69 (52%), Gaps = 1/69 (1%) Query: 90 LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 L ++ +D+ +LDLG G + +A ++ P K D+ + IA+ N V +G++ R Sbjct: 161 LEQLNLKDIKHLLDLGGGPASYAIAFAQQYPQLKATVFDLPLP-ISIARENLVRHGLTSR 219 Query: 150 FDTLQSDWF 158 T+ ++ Sbjct: 220 VQTIAGNFL 228 >gi|312069129|ref|XP_003137538.1| hypothetical protein LOAG_01952 [Loa loa] gi|307767298|gb|EFO26532.1| hypothetical protein LOAG_01952 [Loa loa] Length = 493 Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust. Identities = 28/84 (33%), Positives = 41/84 (48%), Gaps = 10/84 (11%) Query: 102 LDLGTGTGAVCLALLKESPF-FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ--SDWF 158 +D+GTG V ALL F ++ V D A+EIA N NG++ER + ++ +D Sbjct: 105 IDIGTGASCV-YALLGAKQFGWRFVATDADAFAVEIASQNVEKNGMTERIEVVRVPADCM 163 Query: 159 ------SSVEGLFDVIVSNPPYIE 176 S E F + NPP+ E Sbjct: 164 IKNVVRSHPETEFTFCMCNPPFYE 187 >gi|317049792|ref|YP_004117440.1| 50S ribosomal protein L11 methyltransferase [Pantoea sp. At-9b] gi|316951409|gb|ADU70884.1| ribosomal protein L11 methyltransferase [Pantoea sp. At-9b] Length = 293 Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust. Identities = 17/50 (34%), Positives = 32/50 (64%), Gaps = 1/50 (2%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150 ++D G G+G + +A LK + +G+DI +A++ ++ NA NGV++R Sbjct: 162 VIDFGCGSGILAIAALKLG-AAQAIGIDIDPQAIQASRDNAERNGVADRL 210 >gi|109896776|ref|YP_660031.1| rRNA (guanine-N(2)-)-methyltransferase [Pseudoalteromonas atlantica T6c] gi|122972352|sp|Q15YR1|RLMG_PSEA6 RecName: Full=Ribosomal RNA large subunit methyltransferase G; AltName: Full=23S rRNA m2G1835 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rlmG gi|109699057|gb|ABG38977.1| 23S rRNA m(2)G-1835 methyltransferase [Pseudoalteromonas atlantica T6c] Length = 384 Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust. Identities = 31/109 (28%), Positives = 52/109 (47%), Gaps = 11/109 (10%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ------ 154 I+DLG G G + L +L +SP + VD S A+ AK N + + ++ D + Sbjct: 237 IVDLGCGNGVLGLHVLHKSPGAHVIFVDESFMAIASAKMN-IEQNMPDKLDQCKFIVSNC 295 Query: 155 -SDWFSS--VEGLFDVIVSNPPY-IESVIVDCLGLEVRDFDPRISLDGG 199 + SS E D+++ NPP+ ++ I D + L++ RI G Sbjct: 296 LDECLSSGENEATVDIVLCNPPFHQQNTITDHIALQMFKDSKRILKHAG 344 >gi|85096727|ref|XP_960315.1| hypothetical protein NCU07132 [Neurospora crassa OR74A] gi|28921802|gb|EAA31079.1| predicted protein [Neurospora crassa OR74A] Length = 229 Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust. Identities = 25/86 (29%), Positives = 45/86 (52%), Gaps = 4/86 (4%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 +ILDLG GTG + + + PF K VGVD+S ++ N + + + ++F Sbjct: 142 KILDLGCGTGKWTVEIADKFPFAKVVGVDLSPIQAVLSPEN--VEWWVDDIEDEEENFFE 199 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGL 185 + +D++ + Y+ S++VD GL Sbjct: 200 TERNDYDLVHAR--YLLSMVVDPAGL 223 >gi|307136455|gb|ADN34260.1| N6-DNA-methyltransferase [Cucumis melo subsp. melo] Length = 256 Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust. Identities = 30/114 (26%), Positives = 53/114 (46%), Gaps = 7/114 (6%) Query: 70 DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAV----CLALLKESPFFKGV 125 + +EP ++ LVD+ LA + ++ + L+ G G+G V L L KE+ + Sbjct: 17 EVYEPCDDSFALVDALLADRV-KLLNHNPTLCLEFGCGSGYVITSLALILGKEASATHYI 75 Query: 126 GVDISCKALEIAKSNAVTNGVSERF--DTLQSDWFSSVEGLFDVIVSNPPYIES 177 DI+ A+ + + +G+ L S + G DV+V NPPY+ + Sbjct: 76 ATDINPHAIRVTQETLEAHGLHAELVCTDLASGLEKRLAGSVDVLVVNPPYVPT 129 >gi|269961960|ref|ZP_06176315.1| Ribosomal RNA small subunit methyltransferase C [Vibrio harveyi 1DA3] gi|269833283|gb|EEZ87387.1| Ribosomal RNA small subunit methyltransferase C [Vibrio harveyi 1DA3] Length = 341 Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust. Identities = 24/86 (27%), Positives = 42/86 (48%), Gaps = 6/86 (6%) Query: 89 SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148 +LP++ + +LD G G G + + + +P DI+ A+ +++ NG+S Sbjct: 196 TLPKLSGK----VLDFGCGAGVLGAFMAQANPEIAIEMCDINAYAITSSQATLEANGLSG 251 Query: 149 RFDTLQSDWFSSVEGLFDVIVSNPPY 174 R SD +S + IVSNPP+ Sbjct: 252 R--VFASDIYSDTAKDYRFIVSNPPF 275 >gi|302520733|ref|ZP_07273075.1| methyltransferase [Streptomyces sp. SPB78] gi|302429628|gb|EFL01444.1| methyltransferase [Streptomyces sp. SPB78] Length = 308 Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust. Identities = 21/56 (37%), Positives = 28/56 (50%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 I+DLG+GTGA ALL P VD S L+ + A G+ R T+ +D Sbjct: 82 IVDLGSGTGAGTFALLARFPEAHVTAVDSSAPHLQRLREKACAAGLDGRVRTVHAD 137 >gi|227546793|ref|ZP_03976842.1| trans-aconitate 2-methyltransferase [Bifidobacterium longum subsp. infantis ATCC 55813] gi|322691575|ref|YP_004221145.1| trans-aconitate 2-methyltransferase [Bifidobacterium longum subsp. longum JCM 1217] gi|227212755|gb|EEI80636.1| trans-aconitate 2-methyltransferase [Bifidobacterium longum subsp. infantis ATCC 55813] gi|320456431|dbj|BAJ67053.1| trans-aconitate 2-methyltransferase [Bifidobacterium longum subsp. longum JCM 1217] Length = 258 Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust. Identities = 31/91 (34%), Positives = 40/91 (43%), Gaps = 14/91 (15%) Query: 86 LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV--- 142 LA LP + V R+LD+G G G L + P K +GVD S +E A+ Sbjct: 23 LAMQLP-PDDGSVTRVLDIGCGPGNSTAVLRERYPHAKILGVDSSPVMIETARKTYPDID 81 Query: 143 --TNGVSERFDTLQSDWFSSVEGLFDVIVSN 171 VS R D L +D FDV+ SN Sbjct: 82 FQLCDVSARLDELPAD--------FDVVFSN 104 >gi|226360022|ref|YP_002777800.1| hypothetical protein ROP_06080 [Rhodococcus opacus B4] gi|226238507|dbj|BAH48855.1| hypothetical protein [Rhodococcus opacus B4] Length = 283 Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust. Identities = 18/57 (31%), Positives = 33/57 (57%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 R++D+G GTG LAL + P + + +D S LE ++ A+ G+++R + +D Sbjct: 55 RVVDVGAGTGVGSLALARRFPAAEVIAIDRSEVMLERVRAAALGQGMADRVSGVHAD 111 >gi|225378659|ref|ZP_03755880.1| hypothetical protein ROSEINA2194_04328 [Roseburia inulinivorans DSM 16841] gi|225209496|gb|EEG91850.1| hypothetical protein ROSEINA2194_04328 [Roseburia inulinivorans DSM 16841] Length = 247 Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust. Identities = 21/80 (26%), Positives = 44/80 (55%), Gaps = 4/80 (5%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW-- 157 ++LDLGTGTG + + + ++ ++I ++ ++A+ + N + ++ + D Sbjct: 50 KVLDLGTGTGIIPILMEAKTDAADFTALEIQEESADMARRSVAYNHLEDKIKVVTGDIRD 109 Query: 158 FSSVEGL--FDVIVSNPPYI 175 S++ G F VI +NPPY+ Sbjct: 110 ASNIFGASSFHVITTNPPYM 129 >gi|148269321|ref|YP_001243781.1| ubiquinone/menaquinone biosynthesis methyltransferase [Thermotoga petrophila RKU-1] gi|147734865|gb|ABQ46205.1| ubiquinone/menaquinone biosynthesis methyltransferase [Thermotoga petrophila RKU-1] Length = 220 Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust. Identities = 18/40 (45%), Positives = 26/40 (65%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKS 139 ++LDL TGTG V L +++P + G+D S K LEIA+ Sbjct: 41 KVLDLATGTGDVARLLKRKAPHLEITGLDSSSKMLEIAEK 80 >gi|326799623|ref|YP_004317442.1| methyltransferase type 12 [Sphingobacterium sp. 21] gi|326550387|gb|ADZ78772.1| Methyltransferase type 12 [Sphingobacterium sp. 21] Length = 224 Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust. Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 5/85 (5%) Query: 89 SLPRIEKR-DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147 SLP I+ +LD+G GTG + + +P K +DIS + L +AK G+S Sbjct: 33 SLPLIQNHYHAENLLDIGAGTGLFSYFVYQVNPKLKYTLLDISPEMLAVAKRRFT--GLS 90 Query: 148 ERFDTLQSDWFS-SVEGLFDVIVSN 171 F L+ D+ S+ G +D+I+S+ Sbjct: 91 H-FSYLEMDYRERSLPGKYDIIISS 114 >gi|297156578|gb|ADI06290.1| O-methyltransferase family 2 [Streptomyces bingchenggensis BCW-1] Length = 363 Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust. Identities = 21/57 (36%), Positives = 33/57 (57%), Gaps = 1/57 (1%) Query: 94 EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150 +K +VV +LD+G GTG LL+ P +K G+D + + + +A + A GV RF Sbjct: 181 KKDEVVSVLDVGCGTGLYSQLLLERFPTWKAEGID-APRIIRLATAQAERLGVGSRF 236 >gi|268319679|ref|YP_003293335.1| hypothetical protein FI9785_1207 [Lactobacillus johnsonii FI9785] gi|262398054|emb|CAX67068.1| conserved hypothetical protein [Lactobacillus johnsonii FI9785] Length = 182 Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust. Identities = 26/90 (28%), Positives = 45/90 (50%), Gaps = 7/90 (7%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LDL G+GA+ + + + V VDIS +A ++ K N ERF L+ Sbjct: 44 QVLDLYAGSGALGIEAVSRG-YDGAVLVDISGQACQVIKKNVELTKEEERFRVLKCSDNR 102 Query: 160 SVEGL------FDVIVSNPPYIESVIVDCL 183 +++ L FD++ +PPY + IV + Sbjct: 103 AIKILQDEGKKFDLVFLDPPYAKQKIVKIM 132 >gi|260587915|ref|ZP_05853828.1| methyltransferase domain protein [Blautia hansenii DSM 20583] gi|260541442|gb|EEX22011.1| methyltransferase domain protein [Blautia hansenii DSM 20583] Length = 192 Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust. Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 4/79 (5%) Query: 96 RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155 ++ R+LD+ GTGA+ +AL +++P +D+S K EIAK+ N + FD Sbjct: 35 KEHTRVLDVACGTGAMFVALQEKNP-EHITAIDVSEKMAEIAKNKVKDNPL---FDVRCG 90 Query: 156 DWFSSVEGLFDVIVSNPPY 174 D+F + +D I+ Y Sbjct: 91 DFFEIEDEKYDCIMIYNAY 109 >gi|261855970|ref|YP_003263253.1| ribosomal protein L11 methyltransferase [Halothiobacillus neapolitanus c2] gi|261836439|gb|ACX96206.1| ribosomal protein L11 methyltransferase [Halothiobacillus neapolitanus c2] Length = 303 Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust. Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 16/87 (18%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDW 157 +R+LD+G G+G + LA L + G DI +AL+ ++ NA N + E RF W Sbjct: 168 LRVLDVGCGSGILALAALMKGASV-AYGTDIDPQALKASRDNAALNDIPEDRF------W 220 Query: 158 FS-----SVEGLFDVIVSN---PPYIE 176 + E FDV+++N P IE Sbjct: 221 LGLPEELAAEEKFDVLIANILAQPLIE 247 >gi|159128825|gb|EDP53939.1| S-adenosylmethionine-dependent methyltransferase, putative [Aspergillus fumigatus A1163] Length = 355 Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust. Identities = 21/40 (52%), Positives = 31/40 (77%), Gaps = 3/40 (7%) Query: 101 ILDLGTGTGAVCLALLKESPFFKG--VGVDISCKALEIAK 138 ILDLGTG G++ LALL++ F+G VGVD S +++E+A+ Sbjct: 124 ILDLGTGNGSM-LALLRKRGGFRGVMVGVDYSARSVELAR 162 >gi|70989121|ref|XP_749410.1| S-adenosylmethionine-dependent methyltransferase [Aspergillus fumigatus Af293] gi|66847041|gb|EAL87372.1| S-adenosylmethionine-dependent methyltransferase, putative [Aspergillus fumigatus Af293] Length = 355 Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust. Identities = 21/40 (52%), Positives = 31/40 (77%), Gaps = 3/40 (7%) Query: 101 ILDLGTGTGAVCLALLKESPFFKG--VGVDISCKALEIAK 138 ILDLGTG G++ LALL++ F+G VGVD S +++E+A+ Sbjct: 124 ILDLGTGNGSM-LALLRKRGGFRGVMVGVDYSARSVELAR 162 >gi|308182610|ref|YP_003926737.1| Type I restriction enzyme M protein [Helicobacter pylori PeCan4] gi|308064795|gb|ADO06687.1| Type I restriction enzyme M protein [Helicobacter pylori PeCan4] Length = 543 Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust. Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 21/96 (21%) Query: 94 EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD--------ISCKALEIAKSNAVTNG 145 E V+I D GTG + +AL + +G D IS K+L + K N + N Sbjct: 226 EPTQSVKIYDPSAGTGTLLMALAHQ------IGTDSCTLYAQDISQKSLRMLKLNLILND 279 Query: 146 VSERF------DTLQSDWFSS-VEGLFDVIVSNPPY 174 ++ +TL + + S +G D IVSNPP+ Sbjct: 280 LTHSLKYAIEGNTLTNPYHSKEFKGKMDFIVSNPPF 315 >gi|148378068|ref|YP_001252609.1| hypothetical protein CBO0060 [Clostridium botulinum A str. ATCC 3502] gi|153931253|ref|YP_001382467.1| hypothetical protein CLB_0096 [Clostridium botulinum A str. ATCC 19397] gi|153935508|ref|YP_001386019.1| hypothetical protein CLC_0108 [Clostridium botulinum A str. Hall] gi|148287552|emb|CAL81616.1| conserved hypothetical protein [Clostridium botulinum A str. ATCC 3502] gi|152927297|gb|ABS32797.1| conserved hypothetical protein [Clostridium botulinum A str. ATCC 19397] gi|152931422|gb|ABS36921.1| conserved hypothetical protein [Clostridium botulinum A str. Hall] Length = 246 Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust. Identities = 23/98 (23%), Positives = 49/98 (50%), Gaps = 8/98 (8%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 +D+ L + P I ++ +++DL +GTG + L ++ +G++I + ++A + Sbjct: 32 IDAVLLANFPTI--KNGAKVVDLCSGTGIIPFILAGKTNASNIIGIEIQKEIADMANRSI 89 Query: 142 VTNGVSERFDTLQSD-----WFSSVEGLFDVIVSNPPY 174 N + E+ ++ D +E + DV+ NPPY Sbjct: 90 KYNNLQEKVKFIEGDLKNLKLLKDIEKV-DVVTVNPPY 126 >gi|110678101|ref|YP_681108.1| 3-demethylubiquinone-9 3-methyltransferase [Roseobacter denitrificans OCh 114] gi|109454217|gb|ABG30422.1| 3-demethylubiquinone-9 3-methyltransferase [Roseobacter denitrificans OCh 114] Length = 206 Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust. Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 3/89 (3%) Query: 81 LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140 +V LAF +I+ RD R+LDLG G + AL + G+D + +A++ A+ + Sbjct: 38 MVPGRLAFFDRKIDWRDK-RVLDLGCAGGFMAEALCERGAIV--TGIDPAAQAIDAAREH 94 Query: 141 AVTNGVSERFDTLQSDWFSSVEGLFDVIV 169 A +G R+D + + + FD +V Sbjct: 95 AELDGHDIRYDVGKGETLPYADDSFDAVV 123 >gi|134298567|ref|YP_001112063.1| type 11 methyltransferase [Desulfotomaculum reducens MI-1] gi|134051267|gb|ABO49238.1| Methyltransferase type 11 [Desulfotomaculum reducens MI-1] Length = 251 Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust. Identities = 27/87 (31%), Positives = 39/87 (44%), Gaps = 2/87 (2%) Query: 83 DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142 +S L F + V R+LDLG G+G L K VG+D + + +A+ A Sbjct: 17 ESQLKFFRQTFDDLGVSRVLDLGCGSGNYPLEFAKWG--LTVVGLDYEQEMIRLAREKAR 74 Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIV 169 GVS F T ++G FD I+ Sbjct: 75 KAGVSVDFMTGDMRNLEDIDGKFDAII 101 >gi|322689614|ref|YP_004209348.1| trans-aconitate 2-methyltransferase [Bifidobacterium longum subsp. infantis 157F] gi|320460950|dbj|BAJ71570.1| trans-aconitate 2-methyltransferase [Bifidobacterium longum subsp. infantis 157F] Length = 258 Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust. Identities = 31/91 (34%), Positives = 40/91 (43%), Gaps = 14/91 (15%) Query: 86 LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV--- 142 LA LP + V R+LD+G G G L + P K +GVD S +E A+ Sbjct: 23 LAMQLP-PDDGSVTRVLDIGCGPGNSTAVLRERYPHAKILGVDSSPVMIETARKTYPDID 81 Query: 143 --TNGVSERFDTLQSDWFSSVEGLFDVIVSN 171 VS R D L +D FDV+ SN Sbjct: 82 FQLCDVSARLDELPAD--------FDVVFSN 104 >gi|291619128|ref|YP_003521870.1| PrmA [Pantoea ananatis LMG 20103] gi|291154158|gb|ADD78742.1| PrmA [Pantoea ananatis LMG 20103] Length = 294 Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust. Identities = 17/50 (34%), Positives = 32/50 (64%), Gaps = 1/50 (2%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150 ++D G G+G + +A LK + +G+DI +A++ ++ NA NGV++R Sbjct: 162 VIDFGCGSGILAIAALKLG-AAQAIGIDIDPQAIQASRDNAERNGVADRL 210 >gi|256269784|gb|EEU05050.1| YIL064W-like protein [Saccharomyces cerevisiae JAY291] Length = 257 Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust. Identities = 45/185 (24%), Positives = 85/185 (45%), Gaps = 22/185 (11%) Query: 69 SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128 SD+ + + LVD+ A+ RI + ++DLGTG G + L + K VG+D Sbjct: 70 SDSDAEQKMIDFLVDNIGAY---RISEN--ASVVDLGTGNGHMLFELHQTEFQGKLVGID 124 Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSS--VEGLFDVIVSNPPYIESVIVDCLGLE 186 S +++++A + A GV Q+D FS G +D++ ++ +D + L Sbjct: 125 YSEESVKLASNIAEATGVDNFISFQQADIFSGDWNPGKYDIV------LDKGTLDAISL- 177 Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246 + ++G +D + Y + V + L KDG+ + + ++V+I E+ L + Sbjct: 178 -----SGMKINGKLDVVDVYAGV---VEKILEKDGIFLITSCNFTQDELVKIIETDNLKM 229 Query: 247 VNAFK 251 K Sbjct: 230 WKTIK 234 >gi|221639058|ref|YP_002525320.1| SAM-dependent methyltransferase [Rhodobacter sphaeroides KD131] gi|221159839|gb|ACM00819.1| SAM-dependent methyltransferase [Rhodobacter sphaeroides KD131] Length = 396 Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust. Identities = 18/53 (33%), Positives = 32/53 (60%), Gaps = 6/53 (11%) Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIV 169 + + VD S AL +A++ A G+ +RF+T Q+D F ++E L FD+++ Sbjct: 245 RALAVDASGPALALAEAGAKLAGLGDRFETRQADAFQALEALGAEGARFDLVI 297 >gi|167762093|ref|ZP_02434220.1| hypothetical protein BACSTE_00443 [Bacteroides stercoris ATCC 43183] gi|167700052|gb|EDS16631.1| hypothetical protein BACSTE_00443 [Bacteroides stercoris ATCC 43183] Length = 241 Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust. Identities = 16/47 (34%), Positives = 31/47 (65%) Query: 93 IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKS 139 + +R I+D+ TGTG V +++ K+ P + VG+D+S + L++A+ Sbjct: 48 VAERKPTNIVDIATGTGDVAISMAKKIPTSQIVGIDLSEEMLKVAQQ 94 >gi|149920793|ref|ZP_01909256.1| type I restriction-modification system methylation subunit [Plesiocystis pacifica SIR-1] gi|149818311|gb|EDM77763.1| type I restriction-modification system methylation subunit [Plesiocystis pacifica SIR-1] Length = 591 Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust. Identities = 36/142 (25%), Positives = 64/142 (45%), Gaps = 29/142 (20%) Query: 68 SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE--------- 118 + + + PR L+VD+ ++ ++ I D GTG + LA ++ Sbjct: 262 AGEFYTPRSVVRLMVDT--------LDPQEGETIYDPACGTGGMLLAAVEHVKDAGGDPR 313 Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSE----RFDTLQSDWFSSVEG----LFDVIVS 170 + F K G + + +A+ N +GV E R DTL+ F+S E FD++++ Sbjct: 314 TFFGKLFGQEKNLTTASVARMNLQLHGVEEFDIRRGDTLRRPAFASAEDHSLRQFDIVLA 373 Query: 171 NPPYIESVIVDCLGLEVRDFDP 192 NPP+ + G +V + DP Sbjct: 374 NPPF----SLKNWGRDVWESDP 391 >gi|37521220|ref|NP_924597.1| hypothetical protein gll1651 [Gloeobacter violaceus PCC 7421] gi|35212216|dbj|BAC89592.1| gll1651 [Gloeobacter violaceus PCC 7421] Length = 224 Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust. Identities = 26/85 (30%), Positives = 44/85 (51%), Gaps = 5/85 (5%) Query: 76 PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135 P + +VD L + ++ K DV I DLG+G G + + K+ +G+G+DI+ + Sbjct: 74 PTPQEVVDQMLTVA--KVGKDDV--IYDLGSGDGRIVVTAAKQY-GARGIGIDINPARIV 128 Query: 136 IAKSNAVTNGVSERFDTLQSDWFSS 160 A NA GV+ + L+ D F + Sbjct: 129 EANENARKAGVTNQVRFLEQDLFET 153 >gi|46190628|ref|ZP_00121286.2| COG4106: Trans-aconitate methyltransferase [Bifidobacterium longum DJO10A] gi|189438940|ref|YP_001954021.1| trans-aconitate methyltransferase [Bifidobacterium longum DJO10A] gi|189427375|gb|ACD97523.1| Trans-aconitate methyltransferase [Bifidobacterium longum DJO10A] Length = 258 Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust. Identities = 31/91 (34%), Positives = 40/91 (43%), Gaps = 14/91 (15%) Query: 86 LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV--- 142 LA LP + V R+LD+G G G L + P K +GVD S +E A+ Sbjct: 23 LAMQLP-PDDGSVTRVLDIGCGPGNSTAVLRERYPHAKILGVDSSPVMIETARKTYPDID 81 Query: 143 --TNGVSERFDTLQSDWFSSVEGLFDVIVSN 171 VS R D L +D FDV+ SN Sbjct: 82 FQLCDVSARLDELPAD--------FDVVFSN 104 >gi|326774487|ref|ZP_08233752.1| Methyltransferase type 11 [Streptomyces cf. griseus XylebKG-1] gi|326654820|gb|EGE39666.1| Methyltransferase type 11 [Streptomyces cf. griseus XylebKG-1] Length = 248 Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust. Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 1/58 (1%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 R+LDL +G+G + ++ F G GVDIS E A++ A GV++R D L D Sbjct: 38 TRVLDLASGSGEMLCTWARDLGF-TGSGVDISTIFTEQAQARAAELGVADRVDFLHGD 94 >gi|291549934|emb|CBL26196.1| 23S rRNA m(5)U-1939 methyltransferase [Ruminococcus torques L2-14] Length = 456 Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust. Identities = 43/133 (32%), Positives = 64/133 (48%), Gaps = 21/133 (15%) Query: 53 RILGWRDFYNVRL------TLSSDTFEPRPE-TELLVDSALAFSLPRIEKRDVVRILDLG 105 RIL +DF+ +L F+P + E+L ++ + I D + DL Sbjct: 263 RILYGQDFFYEKLLGLEFKITPFSFFQPNSKGAEVLYETVREY----IGDIDNQVVFDLF 318 Query: 106 TGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFS---S 160 +GTG + L +P K V GV+I +A+E AK NAV NG+ +F + D F Sbjct: 319 SGTGTIGQVL---APVAKKVIGVEIIEEAVEAAKENAVRNGLYNCKF--IAGDVFKVLDE 373 Query: 161 VEGLFDVIVSNPP 173 +E DVIV +PP Sbjct: 374 IEEKPDVIVLDPP 386 >gi|268685806|ref|ZP_06152668.1| ribosomal protein L11 methyltransferase [Neisseria gonorrhoeae SK-93-1035] gi|268626090|gb|EEZ58490.1| ribosomal protein L11 methyltransferase [Neisseria gonorrhoeae SK-93-1035] Length = 311 Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust. Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 11/74 (14%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDW 157 +LD G G+G + +A LK VGVDI +A+ + NA N V +F D+L Sbjct: 183 VLDYGCGSGILTIAALKLG-AGSAVGVDIDEQAVRSGRDNAEQNNVDAQFFLPDSLP--- 238 Query: 158 FSSVEGLFDVIVSN 171 +G FDV+V+N Sbjct: 239 ----QGQFDVVVAN 248 >gi|281418183|ref|ZP_06249203.1| putative RNA methylase [Clostridium thermocellum JW20] gi|281409585|gb|EFB39843.1| putative RNA methylase [Clostridium thermocellum JW20] Length = 409 Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust. Identities = 30/82 (36%), Positives = 43/82 (52%), Gaps = 10/82 (12%) Query: 100 RILDLGTGTGAVCL-ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 R+LD T TG+ L A L + VDIS A+++AKSNAV NG+ + D + D F Sbjct: 236 RVLDCFTHTGSFGLNAALGGAEHV--TCVDISQSAIDMAKSNAVRNGLDGKMDFVCEDVF 293 Query: 159 SSVEGL-------FDVIVSNPP 173 + L +D I+ +PP Sbjct: 294 DLLTKLAEQKCHDYDYIILDPP 315 >gi|170287980|ref|YP_001738218.1| ubiquinone/menaquinone biosynthesis methyltransferase [Thermotoga sp. RQ2] gi|170175483|gb|ACB08535.1| ubiquinone/menaquinone biosynthesis methyltransferase [Thermotoga sp. RQ2] Length = 220 Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust. Identities = 18/40 (45%), Positives = 26/40 (65%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKS 139 ++LDL TGTG V L +++P + G+D S K LEIA+ Sbjct: 41 KVLDLATGTGDVARLLKRKAPHLEITGLDSSSKMLEIAEK 80 >gi|163759168|ref|ZP_02166254.1| Cyclopropane-fatty-acyl-phospholipid synthase [Hoeflea phototrophica DFL-43] gi|162283572|gb|EDQ33857.1| Cyclopropane-fatty-acyl-phospholipid synthase [Hoeflea phototrophica DFL-43] Length = 423 Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust. Identities = 42/144 (29%), Positives = 64/144 (44%), Gaps = 12/144 (8%) Query: 34 QRFFLTNAIVRSLKHESIHRILG---WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSL 90 +RF N + RS + H +G +R F + + S F PET ++ A Sbjct: 106 RRFQQNNVLSRSRANVKAHYDIGEDLYRLFLDRDMQYSCAYFPDGPET---IEDAQTLKK 162 Query: 91 PRIEKR----DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146 I + D R+LD+G G G + L L + + VGV +S + L +A+ A GV Sbjct: 163 RHIAAKLCLKDGQRVLDIGCGWGGMALYLAHVADV-EVVGVTLSERQLAVARRRAEILGV 221 Query: 147 SERFDTLQSDWFSSVEGLFDVIVS 170 S+R D + V FD +VS Sbjct: 222 SDRVRFELID-YREVTEKFDRVVS 244 >gi|126462072|ref|YP_001043186.1| SAM-dependent methyltransferase [Rhodobacter sphaeroides ATCC 17029] gi|126103736|gb|ABN76414.1| SAM-dependent methyltransferase [Rhodobacter sphaeroides ATCC 17029] Length = 396 Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust. Identities = 18/53 (33%), Positives = 32/53 (60%), Gaps = 6/53 (11%) Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIV 169 + + VD S AL +A++ A G+ +RF+T Q+D F ++E L FD+++ Sbjct: 245 RALAVDASGPALALAEAGAKLAGLGDRFETRQADAFQALEALGAEGARFDLVI 297 >gi|322382544|ref|ZP_08056424.1| hypothetical protein PL1_2270 [Paenibacillus larvae subsp. larvae B-3650] gi|321153460|gb|EFX45865.1| hypothetical protein PL1_2270 [Paenibacillus larvae subsp. larvae B-3650] Length = 185 Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust. Identities = 30/116 (25%), Positives = 57/116 (49%), Gaps = 10/116 (8%) Query: 75 RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134 RP T+ + ++ + P D +LDL GTG + + L KG+ VDI K+L Sbjct: 22 RPTTDKVKEAIFSMIGPYF---DGGSVLDLFAGTGGLGIEALSRG-MEKGIFVDIEKKSL 77 Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPPYIESVIVDCLG 184 + + N +S+R + ++D +++ L F+++ +PPY +I + +G Sbjct: 78 DTIRHNLEAAKLSDRAEVYRNDAKRALKILAKRNQQFNLVFLDPPYRMKMIRELIG 133 >gi|269795602|ref|YP_003315057.1| 16S rRNA m(2)G 1207 methyltransferase [Sanguibacter keddieii DSM 10542] gi|269097787|gb|ACZ22223.1| 16S rRNA m(2)G 1207 methyltransferase [Sanguibacter keddieii DSM 10542] Length = 217 Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust. Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 2/73 (2%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LDLG G G V L + ++P + VD++ +AL++ + NA G+ D + Sbjct: 65 VLDLGAGWGPVSLTMAMQNPQARVWAVDVNERALDLVRRNAARLGLENVTACTPDDVPAD 124 Query: 161 VEGLFDVIVSNPP 173 V F + SNPP Sbjct: 125 VR--FAQLWSNPP 135 >gi|254785988|ref|YP_003073417.1| RNA methyltransferase, RsmC family [Teredinibacter turnerae T7901] gi|237687034|gb|ACR14298.1| RNA methyltransferase, RsmC family [Teredinibacter turnerae T7901] Length = 342 Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust. Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 2/80 (2%) Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 LDLG G G + + LLK + + + + D + A+ + NG ++ F + +D SS+ Sbjct: 208 LDLGCGYGYLGVGLLK-AGWQQIIATDNNAAAVLACNATLTENG-AQNFSVVAADCGSSI 265 Query: 162 EGLFDVIVSNPPYIESVIVD 181 E D++V NPP+ + V+ Sbjct: 266 ERKADLVVCNPPFHQGFGVE 285 >gi|269926088|ref|YP_003322711.1| ribosomal protein L11 methyltransferase [Thermobaculum terrenum ATCC BAA-798] gi|269789748|gb|ACZ41889.1| ribosomal protein L11 methyltransferase [Thermobaculum terrenum ATCC BAA-798] Length = 315 Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust. Identities = 27/80 (33%), Positives = 41/80 (51%), Gaps = 4/80 (5%) Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 LDLGTG+G + A+ K + + VDI A+ AKS NG+S++ L+ Sbjct: 182 LDLGTGSGILAAAMAKLGAK-QVLAVDIDPVAVSAAKSTVERNGISDKVQVLEGS-IEKA 239 Query: 162 EGLFDVIVSNPPYIESVIVD 181 +D I +N I SVI++ Sbjct: 240 TAQYDFIAAN--IIASVIIE 257 >gi|182433951|ref|YP_001821670.1| hypothetical protein SGR_158 [Streptomyces griseus subsp. griseus NBRC 13350] gi|178462467|dbj|BAG16987.1| conserved hypothetical protein [Streptomyces griseus subsp. griseus NBRC 13350] Length = 255 Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust. Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 1/58 (1%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 R+LDL +G+G + ++ F G GVDIS E A++ A GV++R D L D Sbjct: 45 TRVLDLASGSGEMLCTWARDLGF-TGSGVDISTIFTEQAQARAAELGVADRVDFLHGD 101 >gi|167970986|ref|ZP_02553263.1| type I restriction-modification system, M subunit [Ureaplasma parvum serovar 6 str. ATCC 27818] gi|186701152|gb|EDU19434.1| type I restriction-modification system, M subunit [Ureaplasma parvum serovar 6 str. ATCC 27818] Length = 367 Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust. Identities = 31/110 (28%), Positives = 54/110 (49%), Gaps = 7/110 (6%) Query: 72 FEPRPETELLVDSALA-FSLPRIE-KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129 F P+ +ELLV+ L F+ + +R + ++ D G+G++ L K + K G +I Sbjct: 44 FTPQEVSELLVELTLIDFNNENKDVRRKIGKVYDPCCGSGSLLLKYAKLNEGVKFYGQEI 103 Query: 130 SCKALEIAKSNAVTNGVS-ERFDTLQSDWF----SSVEGLFDVIVSNPPY 174 + +A+ N + + ++FD D + + FD IVSNPPY Sbjct: 104 NLTTYNLARINMFLHNIGYDKFDIKLGDTLLDPKHNDDKPFDAIVSNPPY 153 >gi|1045230|emb|CAA63163.1| N-methyl-transferase [Streptomyces alboniger] Length = 228 Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust. Identities = 41/142 (28%), Positives = 65/142 (45%), Gaps = 20/142 (14%) Query: 102 LDLGTGTGAVCL-ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 L++G GTG + + A L S +DI+ KA+ +NA +GV +R L SD +++ Sbjct: 65 LEVGCGTGVISVTAALHGSDV---TALDINEKAVANTLANAERHGVEDRVRVLHSDLYAA 121 Query: 161 VEGL--FDVIVSNPP--YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216 +E FD I N P Y+E L FDP G G S + + G H Sbjct: 122 LEPTDRFDAIFWNVPWTYVEDGFPLSSDLHSAVFDP------GYQGQSRFIS---GARDH 172 Query: 217 LNKDG---LCSVEIGYNQKVDV 235 L G + + ++G +++D Sbjct: 173 LADGGRLLIGTADLGDRERIDA 194 >gi|85374263|ref|YP_458325.1| ribosomal protein L11 methylase [Erythrobacter litoralis HTCC2594] gi|84787346|gb|ABC63528.1| ribosomal protein L11 methylase [Erythrobacter litoralis HTCC2594] Length = 306 Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust. Identities = 16/48 (33%), Positives = 26/48 (54%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148 I D+GTGTG + L+ P DI + + ++NA TNG+++ Sbjct: 157 IADIGTGTGLLAFGALRLWPHATMTATDIDANCVPVIEANAATNGIAQ 204 >gi|331084510|ref|ZP_08333611.1| hypothetical protein HMPREF0992_02535 [Lachnospiraceae bacterium 6_1_63FAA] gi|330401218|gb|EGG80809.1| hypothetical protein HMPREF0992_02535 [Lachnospiraceae bacterium 6_1_63FAA] Length = 192 Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust. Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 4/79 (5%) Query: 96 RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155 ++ R+LD+ GTGA+ +AL +++P +D+S K EIAK+ N + FD Sbjct: 35 KEHTRVLDVACGTGAMFVALQEKNP-EHITAIDVSEKMAEIAKNKVKDNPL---FDVRCG 90 Query: 156 DWFSSVEGLFDVIVSNPPY 174 D+F + +D I+ Y Sbjct: 91 DFFEIEDEKYDCIMIYNAY 109 >gi|293397759|ref|ZP_06641965.1| 50S ribosomal protein L11 methyltransferase [Neisseria gonorrhoeae F62] gi|291611705|gb|EFF40774.1| 50S ribosomal protein L11 methyltransferase [Neisseria gonorrhoeae F62] Length = 311 Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust. Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 11/74 (14%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDW 157 +LD G G+G + +A LK VGVDI +A+ + NA N V +F D+L Sbjct: 183 VLDYGCGSGILTIAALKLG-AGSAVGVDIDEQAVRSGRDNAEQNNVDAQFFLPDSLP--- 238 Query: 158 FSSVEGLFDVIVSN 171 +G FDV+V+N Sbjct: 239 ----QGQFDVVVAN 248 >gi|296129408|ref|YP_003636658.1| methyltransferase small [Cellulomonas flavigena DSM 20109] gi|296021223|gb|ADG74459.1| methyltransferase small [Cellulomonas flavigena DSM 20109] Length = 205 Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust. Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 2/73 (2%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LDLG G G V L L SP + VD++ +AL++ + NA G+ D Sbjct: 69 LLDLGCGWGPVALTLALLSPDARVWAVDVNERALDLVRRNAARLGLGNVVAATPDD--VP 126 Query: 161 VEGLFDVIVSNPP 173 V+ F + SNPP Sbjct: 127 VDVAFAALWSNPP 139 >gi|148654529|ref|YP_001274734.1| RNA methyltransferase [Roseiflexus sp. RS-1] gi|148566639|gb|ABQ88784.1| RNA methyltransferase, TrmA family [Roseiflexus sp. RS-1] Length = 434 Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust. Identities = 38/110 (34%), Positives = 56/110 (50%), Gaps = 9/110 (8%) Query: 71 TFEPRPETELLVDSALAFSLPRIEKRDVV-----RILDLGTGTGAVCLALLKESPFFKGV 125 TF RP T V+ A A +L + + + R+LDL G G L L + + + V Sbjct: 260 TFLLRPTTFFQVNVAAATTLLNLIRAGLGDEAGGRLLDLYCGAGTFTLPLARAA--IQVV 317 Query: 126 GVDISCKALEIAKSNAVTNGVSE-RFDTLQSDW-FSSVEGLFDVIVSNPP 173 GV+ A+ A+ +A N VS RF +++ SS+EG FD IV +PP Sbjct: 318 GVEEYPGAVADAERSAAVNHVSNVRFVVGRAEAVLSSLEGDFDAIVLDPP 367 >gi|317163463|gb|ADV07004.1| ribosomal protein L11 methyltransferase [Neisseria gonorrhoeae TCDC-NG08107] Length = 311 Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust. Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 11/74 (14%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDW 157 +LD G G+G + +A LK VGVDI +A+ + NA N V +F D+L Sbjct: 183 VLDYGCGSGILTIAALKLG-AGSAVGVDIDEQAVRSGRDNAEQNNVDAQFFLPDSLP--- 238 Query: 158 FSSVEGLFDVIVSN 171 +G FDV+V+N Sbjct: 239 ----QGQFDVVVAN 248 >gi|268610816|ref|ZP_06144543.1| putative methyltransferase type 11 [Ruminococcus flavefaciens FD-1] Length = 214 Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust. Identities = 19/55 (34%), Positives = 30/55 (54%) Query: 90 LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN 144 L +EK +LD G GTG + L ++ P G+D++ K +E+AK A+ N Sbjct: 40 LAELEKEPFNDLLDCGCGTGPMLTLLHEKYPEKHYTGIDLTPKMIEVAKRKALKN 94 >gi|251793183|ref|YP_003007911.1| ribosomal protein L11 methyltransferase [Aggregatibacter aphrophilus NJ8700] gi|247534578|gb|ACS97824.1| ribosomal protein L11 methyltransferase [Aggregatibacter aphrophilus NJ8700] Length = 294 Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust. Identities = 20/56 (35%), Positives = 33/56 (58%), Gaps = 1/56 (1%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 ++D G G+G + +A LK VG+DI +A+ +++NA NGV++R SD Sbjct: 162 VIDFGCGSGILAIAALKLGAK-SAVGIDIDPQAILASRNNAEQNGVADRLQLFLSD 216 >gi|257388001|ref|YP_003177774.1| methyltransferase [Halomicrobium mukohataei DSM 12286] gi|257170308|gb|ACV48067.1| methyltransferase [Halomicrobium mukohataei DSM 12286] Length = 333 Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust. Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 11/87 (12%) Query: 79 ELLVDSALAFSLPRI--EKRDVV-------RILDLGTGTGAVCLALLKESPFFKGVGVDI 129 E LVD + PR+ E+ VV R LD+ G G + + VGVD+ Sbjct: 154 EFLVDLDAVYFSPRLATERHRVVEQVGADERALDMFAGVGPFVVPFAQRG--ATAVGVDV 211 Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSD 156 + A+E + NA NGV++R ++ D Sbjct: 212 NPTAIEYLRENARRNGVADRVTAIEGD 238 >gi|219126021|ref|XP_002183266.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217405541|gb|EEC45484.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 315 Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust. Identities = 24/87 (27%), Positives = 41/87 (47%), Gaps = 12/87 (13%) Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 +DLG+GTG + LL P +++ A+ +AV GV++RF T+++ + Sbjct: 95 VDLGSGTGGAAIRLLSAHPSLTATCLNLCEAQNATAQQDAVAAGVADRF-TVRTGSYDQA 153 Query: 162 E-----------GLFDVIVSNPPYIES 177 + GLFDV S ++ S Sbjct: 154 QALLLPENNKQPGLFDVCFSQDAFVHS 180 >gi|110639089|ref|YP_679298.1| SAM-dependent methyltransferase [Cytophaga hutchinsonii ATCC 33406] gi|123354403|sp|Q11RK8|TRMN6_CYTH3 RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName: Full=tRNA m6A37 methyltransferase gi|110281770|gb|ABG59956.1| SAM-dependent methyltransferase [Cytophaga hutchinsonii ATCC 33406] Length = 238 Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust. Identities = 25/80 (31%), Positives = 39/80 (48%), Gaps = 4/80 (5%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ---SDW 157 ILD+GTGTG + L L + S V+++ A + A N + +ER D+ Sbjct: 42 ILDIGTGTGLLALMLAQRSN-ADIDAVELNKDAAQQATDNFFNSPWNERLHVHTCSIQDY 100 Query: 158 FSSVEGLFDVIVSNPPYIES 177 F +D+IV NPP+ + Sbjct: 101 FKFTTKQYDLIVCNPPFFSA 120 >gi|323354593|gb|EGA86429.1| YIL064W-like protein [Saccharomyces cerevisiae VL3] Length = 257 Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust. Identities = 45/185 (24%), Positives = 85/185 (45%), Gaps = 22/185 (11%) Query: 69 SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128 SD+ + + LVD+ A+ RI + ++DLGTG G + L + K VG+D Sbjct: 70 SDSDAEQKMIDFLVDNIGAY---RISEN--ASVVDLGTGNGHMLFELHQTEFQGKLVGID 124 Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSS--VEGLFDVIVSNPPYIESVIVDCLGLE 186 S +++++A + A GV Q+D FS G +D++ ++ +D + L Sbjct: 125 YSEESVKLASNIAEATGVDNFISFQQADIFSGDWNPGKYDIV------LDKGTLDAISL- 177 Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246 + ++G +D + Y + V + L KDG+ + + ++V+I E+ L + Sbjct: 178 -----SGMXINGKLDVVDVYAGV---VEKILEKDGIFLITSCNFTQDELVKIIETDNLKM 229 Query: 247 VNAFK 251 K Sbjct: 230 WKTIK 234 >gi|319947512|ref|ZP_08021744.1| methyltransferase [Streptococcus australis ATCC 700641] gi|319746452|gb|EFV98713.1| methyltransferase [Streptococcus australis ATCC 700641] Length = 179 Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust. Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 5/95 (5%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW-- 157 R+LDL G+G + + + + V V+ +A I SN S +F L+ + Sbjct: 44 RVLDLYAGSGGLSIEAVSRG-MEQAVLVEKDRRAQGIIASNIQMTKESHKFQLLKMEAHQ 102 Query: 158 -FSSVEGLFDVIVSNPPYI-ESVIVDCLGLEVRDF 190 S ++G FD++ +PPY E ++ D L RD Sbjct: 103 ALSQLQGTFDLVFLDPPYAKEQIVADIEALAERDL 137 >gi|319775089|ref|YP_004137577.1| ribosomal protein L11 methyltransferase [Haemophilus influenzae F3047] gi|329123000|ref|ZP_08251571.1| ribosomal protein L11 methyltransferase [Haemophilus aegyptius ATCC 11116] gi|317449680|emb|CBY85886.1| ribosomal protein L11 methyltransferase [Haemophilus influenzae F3047] gi|327471931|gb|EGF17371.1| ribosomal protein L11 methyltransferase [Haemophilus aegyptius ATCC 11116] Length = 294 Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust. Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 2/71 (2%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 ++D G G+G + +A LK VG+DI +A+ +++NA NGV++R SD S Sbjct: 162 VIDFGCGSGILAIAALKLGAK-SAVGIDIDPQAILASRNNAEQNGVADRLQLFLSDEKPS 220 Query: 161 VEGLFDVIVSN 171 + DV+V+N Sbjct: 221 -DLKADVVVAN 230 >gi|307544298|ref|YP_003896777.1| 16S ribosomal RNA methyltransferase [Halomonas elongata DSM 2581] gi|307216322|emb|CBV41592.1| 16S ribosomal RNA m2G1207 methyltransferase [Halomonas elongata DSM 2581] Length = 329 Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust. Identities = 24/82 (29%), Positives = 40/82 (48%), Gaps = 5/82 (6%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LD+G G G + L + D++ A+E + TNG+ + SD ++ Sbjct: 193 VLDMGCGDGIIAAWLARRG--LAVTAADVNGFAVEATRRTLATNGLEG--EVFHSDVYAG 248 Query: 161 V-EGLFDVIVSNPPYIESVIVD 181 + + FD IVSNPP+ + VD Sbjct: 249 LPQTRFDAIVSNPPFHQERAVD 270 >gi|302331844|gb|ADL22037.1| putative methyltransferase [Staphylococcus aureus subsp. aureus JKD6159] Length = 243 Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust. Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 3/82 (3%) Query: 90 LPRIEKRDVVRILDLGTGTGAVCLALLKE-SPFFKGVGVDISCKALEIAKSNAVTNGVSE 148 L R + ++ +R+LD+G TG V + K + VGVD++ L+IA N N VS Sbjct: 12 LDRAQIKEGMRVLDIGCATGEVTQLIAKRVGANGEVVGVDVNESLLKIANENNQYNNVSY 71 Query: 149 RFDTLQSDWFSSVEGLFDVIVS 170 ++ + G FD IV Sbjct: 72 QYSDIYQ--LPETMGYFDAIVG 91 >gi|167574672|ref|ZP_02367546.1| NRPS/PKS hybrid [Burkholderia oklahomensis C6786] Length = 282 Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust. Identities = 36/121 (29%), Positives = 53/121 (43%), Gaps = 18/121 (14%) Query: 54 ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113 ++GW D Y+ PR E + D LA RI +R R+L++G GTG + L Sbjct: 37 LVGWADSYD-------GAPIPRDEMRMWRDEVLA----RIRERPSRRVLEIGCGTGMLLL 85 Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL---FDVIVS 170 L F VG+D S +A+ + G+ TL ++GL FD I+ Sbjct: 86 PLAASCERF--VGLDFSAQAIARLRRVVARRGLDTV--TLVERAADELDGLARDFDTIIV 141 Query: 171 N 171 N Sbjct: 142 N 142 >gi|77463198|ref|YP_352702.1| SAM-dependent methyltransferase [Rhodobacter sphaeroides 2.4.1] gi|77387616|gb|ABA78801.1| SAM-dependent methyltransferase [Rhodobacter sphaeroides 2.4.1] Length = 396 Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust. Identities = 18/53 (33%), Positives = 32/53 (60%), Gaps = 6/53 (11%) Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIV 169 + + VD S AL +A++ A G+ +RF+T Q+D F ++E L FD+++ Sbjct: 245 RALAVDASGPALALAEAGAKLAGLGDRFETRQADAFQALEALGAEGARFDLVI 297 >gi|50285219|ref|XP_445038.1| hypothetical protein [Candida glabrata CBS 138] gi|49524341|emb|CAG57938.1| unnamed protein product [Candida glabrata] Length = 223 Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust. Identities = 32/134 (23%), Positives = 62/134 (46%), Gaps = 9/134 (6%) Query: 101 ILDLGTGTGAVCLALLKESPFFKG-----VGVDISCKALEIAKSNAVTNGVSERF-DTLQ 154 + ++G G+G V +++ + G +D++ ALE + A N + + + +Q Sbjct: 46 VCEIGVGSGIVTTFMMQNTIPSAGHLNLYYAIDVNPWALESTLTTADINNCKKSYLEPVQ 105 Query: 155 SDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD--GGIDGLSHYRTIAD 211 +D SS D+++ NPPY+ + V + E D D + L GG DG+ + D Sbjct: 106 ADLTSSFRTREIDLLIFNPPYVPAEDVPTIPEETDDQDKWLDLALLGGEDGMDVTNKVLD 165 Query: 212 GVSRHLNKDGLCSV 225 + L+ G+ + Sbjct: 166 NLEAILSLRGVAYI 179 >gi|325335813|gb|ADZ12087.1| Mannose-1-phosphate guanylyltransferase [Riemerella anatipestifer RA-GD] Length = 344 Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust. Identities = 26/94 (27%), Positives = 46/94 (48%), Gaps = 3/94 (3%) Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI-GYNQ 231 P E + +D +E D I D G L + ++ D ++ ++ + S I YN Sbjct: 244 PKAEKISIDNGIMEKADNVYVIPADLGWSDLGTWNSVYDNAEKNDEQNSINSKYILTYNS 303 Query: 232 KVDVVRIFESRKLFLVNAFKDY--GGNDRVLLFC 263 K +V+R+ ES KL +++ +DY ++ LL C Sbjct: 304 KGNVIRLKESNKLAIIDGLQDYIVVDTEKALLIC 337 >gi|306821417|ref|ZP_07455022.1| SAM-dependent methyltransferase [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304550539|gb|EFM38525.1| SAM-dependent methyltransferase [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 248 Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust. Identities = 23/98 (23%), Positives = 48/98 (48%), Gaps = 6/98 (6%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 +D+ L + + +K D + DLGTGTG + + + +S K ++I ++A+ + Sbjct: 29 IDAVLLANFVKFKKNDT--LADLGTGTGIIPILVKAKSNIAKIYAIEIQKHIADMARRSV 86 Query: 142 VTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPYI 175 N + + L + ++ + D+I +NPPY+ Sbjct: 87 ELNNFQDDIEILNINLKDTLNFIPKYSIDIITTNPPYM 124 >gi|212223826|ref|YP_002307062.1| SAM-dependent methyltransferase [Thermococcus onnurineus NA1] gi|212008783|gb|ACJ16165.1| SAM-dependent methyltransferase [Thermococcus onnurineus NA1] Length = 272 Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust. Identities = 20/56 (35%), Positives = 34/56 (60%), Gaps = 2/56 (3%) Query: 95 KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150 +R+V R+LD+ GTGA L L++ ++ VG+DI+ + L +A+ A +S F Sbjct: 39 RREVRRVLDIACGTGAPTLELVRRG--YEVVGLDINEEMLTVARGKAQREELSVEF 92 >gi|323476892|gb|ADX82130.1| hypothetical protein SiH_0775 [Sulfolobus islandicus HVE10/4] Length = 319 Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust. Identities = 31/88 (35%), Positives = 44/88 (50%), Gaps = 16/88 (18%) Query: 99 VRILDLGTGTGAVCLALLK-------ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151 R+LD G G G A++K E P + VGV+I K E A+ N +S + Sbjct: 13 ARVLDAGCGEGVFIEAIIKWYSERGIELP--EIVGVEIDHKLAERARKK--FNNIS-KVK 67 Query: 152 TLQSDWFSSVE----GLFDVIVSNPPYI 175 ++ D+ + E G FD I+SNPPYI Sbjct: 68 IIEDDFLTVKEEKLGGEFDYIISNPPYI 95 >gi|256826666|ref|YP_003150625.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Cryptobacterium curtum DSM 15641] gi|256582809|gb|ACU93943.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Cryptobacterium curtum DSM 15641] Length = 543 Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust. Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 1/71 (1%) Query: 77 ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136 +TE+L +AL + + ILD GTG + L + P + +G+D + ++ Sbjct: 368 QTEVLYRTALEMAAC-TSSHQALTILDAYCGTGTIGLVAASQVPNSQVIGIDNASSSIRD 426 Query: 137 AKSNAVTNGVS 147 A+ NAV NG++ Sbjct: 427 ARQNAVHNGIA 437 >gi|225027843|ref|ZP_03717035.1| hypothetical protein EUBHAL_02103 [Eubacterium hallii DSM 3353] gi|224954790|gb|EEG35999.1| hypothetical protein EUBHAL_02103 [Eubacterium hallii DSM 3353] Length = 560 Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust. Identities = 39/122 (31%), Positives = 59/122 (48%), Gaps = 12/122 (9%) Query: 57 WRDFYNVRLTLSSDTFEPRPE--TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLA 114 + YN+R +S +F E+L D + E +D + I DL TGTG + Sbjct: 286 YEYLYNMRFKISPFSFFQTNTLGAEVLYDKVREYVG---ETKDKL-IYDLYTGTGTIAQM 341 Query: 115 LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF---DVIVSN 171 L S K VGV+I +A+E AK NAV N + + + + D V+ L D++V + Sbjct: 342 LA--SVASKVVGVEIVEEAVEAAKKNAVDNHL-DNCEFIAGDVLKVVDNLTKKPDILVLD 398 Query: 172 PP 173 PP Sbjct: 399 PP 400 >gi|225016200|ref|ZP_03705392.1| hypothetical protein CLOSTMETH_00103 [Clostridium methylpentosum DSM 5476] gi|224951022|gb|EEG32231.1| hypothetical protein CLOSTMETH_00103 [Clostridium methylpentosum DSM 5476] Length = 371 Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust. Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 3/70 (4%) Query: 112 CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFD--VIV 169 L L++ FK G DI +A+E+++ NA GV R Q D S+ E + +++ Sbjct: 242 ALDLIRRDAEFKAFGFDIDMQAVELSRDNAKKAGVLPRIRFAQGD-ISNFEPSEEKGIVI 300 Query: 170 SNPPYIESVI 179 NPPY E ++ Sbjct: 301 CNPPYGERML 310 >gi|154492216|ref|ZP_02031842.1| hypothetical protein PARMER_01850 [Parabacteroides merdae ATCC 43184] gi|154087441|gb|EDN86486.1| hypothetical protein PARMER_01850 [Parabacteroides merdae ATCC 43184] Length = 194 Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust. Identities = 25/54 (46%), Positives = 31/54 (57%), Gaps = 1/54 (1%) Query: 90 LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143 L R R +RILD+G GTG + LL SP + VGVDIS +E A+S T Sbjct: 30 LRRTGLRKGLRILDIGCGTGVLESYLLPYSP-LQIVGVDISPGMIEKARSKYAT 82 >gi|11993696|gb|AAG42853.1|AF323753_8 SnogM [Streptomyces nogalater] Length = 278 Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust. Identities = 22/58 (37%), Positives = 35/58 (60%), Gaps = 1/58 (1%) Query: 92 RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 RIE R+LD+G GTGA + L + + + VG+ IS + + +A ++A GV+ER Sbjct: 58 RIEVGPGQRVLDIGCGTGAPAVQLARAT-GAEVVGITISPEQVRLATAHAEREGVAER 114 >gi|328948517|ref|YP_004365854.1| hypothetical protein Tresu_1660 [Treponema succinifaciens DSM 2489] gi|328448841|gb|AEB14557.1| protein of unknown function Met10 [Treponema succinifaciens DSM 2489] Length = 415 Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust. Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 7/80 (8%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LD T TGA L +K + V VDIS +A+++ + N NG E+ + +D F Sbjct: 243 KVLDTFTHTGAFGLNAVKAGAR-EVVSVDISQEAVDMVEKNISLNGAEEKMKAVCADVFD 301 Query: 160 SVEGL------FDVIVSNPP 173 ++ FDVI+ +PP Sbjct: 302 LLKQYEASGEKFDVIILDPP 321 >gi|282883188|ref|ZP_06291787.1| ribosomal protein L11 methyltransferase [Peptoniphilus lacrimalis 315-B] gi|281297000|gb|EFA89497.1| ribosomal protein L11 methyltransferase [Peptoniphilus lacrimalis 315-B] Length = 301 Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust. Identities = 29/93 (31%), Positives = 49/93 (52%), Gaps = 4/93 (4%) Query: 89 SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148 +L + K+D+ I D+G G+G + +A +K VDI K ++ ++ NA N V + Sbjct: 157 ALDKYVKKDM-NIFDIGCGSGILGIAAIKLGGK-SATLVDIDDKCIKASEENAKLNEVYD 214 Query: 149 RFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181 + + + +EG D+IVSN I +IVD Sbjct: 215 KVKVKKGNLLDVIEGKCDIIVSN--IIAEIIVD 245 >gi|256841381|ref|ZP_05546888.1| 2-heptaprenyl-1,4-naphthoquinone methyltransferase [Parabacteroides sp. D13] gi|256737224|gb|EEU50551.1| 2-heptaprenyl-1,4-naphthoquinone methyltransferase [Parabacteroides sp. D13] Length = 247 Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust. Identities = 28/110 (25%), Positives = 49/110 (44%), Gaps = 11/110 (10%) Query: 72 FEPRPETELLVDSALAFSLPRIEKRDVV---------RILDLGTGTGAVCLALLKESPFF 122 F+ ET ++ L+F + +I +R + ILD+ TGTG + +++ K+ Sbjct: 26 FDSIAETYDQLNHTLSFGIDKIWRRKGIAFLRPFSPKTILDIATGTGDLAISMYKKLRPD 85 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD--WFSSVEGLFDVIVS 170 +G DIS +E+ + G SE Q D + E FD + + Sbjct: 86 HIIGADISLGMMEVGRKKVAAAGYSEHISFEQQDCTALTYEENSFDAVTA 135 >gi|167042826|gb|ABZ07544.1| putative ribosomal protein L11 methyltransferase (PrmA) [uncultured marine microorganism HF4000_ANIW137I15] Length = 337 Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust. Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 3/92 (3%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+LD+G G+G + +A K P + +DI A + NA N V+ R T++ Sbjct: 201 RVLDIGCGSGILGIAAAKWFPRCRVTSIDIDPGAYHATRDNARKNRVAGRM-TVREGSLE 259 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFD 191 G F +I++N Y+E + D GL R + Sbjct: 260 RTRGKFGLILAN-LYLEP-LRDLAGLMARRLE 289 >gi|182412125|ref|YP_001817191.1| methyltransferase type 11 [Opitutus terrae PB90-1] gi|177839339|gb|ACB73591.1| Methyltransferase type 11 [Opitutus terrae PB90-1] Length = 380 Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust. Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 3/51 (5%) Query: 101 ILDLGTGTGAVC-LALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150 +LDLG+GTG +C +A P + +GVD++ + LE+A+ NA V+ER Sbjct: 60 VLDLGSGTGKICFIAAQVVGPQGRVIGVDMTDEMLEVARRNAPV--VAERL 108 >gi|170289229|ref|YP_001739467.1| methyltransferase type 11 [Thermotoga sp. RQ2] gi|170176732|gb|ACB09784.1| Methyltransferase type 11 [Thermotoga sp. RQ2] Length = 248 Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust. Identities = 38/115 (33%), Positives = 58/115 (50%), Gaps = 13/115 (11%) Query: 59 DFYNVRLTLSSDTFEPRPETEL---LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL 115 +FY+ R+ + D+ P+ +L L+ S L L ++ R+LDLG GTG L L Sbjct: 7 EFYD-RIARAYDSMYETPKWKLYHRLIGSFLEEYL-----KNPCRVLDLGGGTGKWSLFL 60 Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL--QSDWFSSVEGLFDVI 168 + F+ V VD S + LE+A+ V N V + + L S F +V L DV+ Sbjct: 61 QERG--FEVVLVDPSKEMLEVAREKGVKNVVEAKAEDLPFPSGAFEAVLALGDVL 113 >gi|146277230|ref|YP_001167389.1| putative RNA methylase [Rhodobacter sphaeroides ATCC 17025] gi|145555471|gb|ABP70084.1| SAM-dependent methyltransferase [Rhodobacter sphaeroides ATCC 17025] Length = 427 Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust. Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 6/53 (11%) Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIV 169 + + VD S AL +A++ A G+ ERF+T Q D F +E L FD+++ Sbjct: 276 RALAVDASGPALALAEAGAKLAGLGERFETRQGDAFQVLEALGADGARFDLVI 328 >gi|319897511|ref|YP_004135708.1| ribosomal protein l11 methyltransferase [Haemophilus influenzae F3031] gi|317433017|emb|CBY81388.1| ribosomal protein L11 methyltransferase [Haemophilus influenzae F3031] Length = 294 Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust. Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 2/71 (2%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 ++D G G+G + +A LK VG+DI +A+ +++NA NGV++R SD S Sbjct: 162 VIDFGCGSGILAIAALKLGAK-SAVGIDIDPQAILASRNNAEQNGVADRLQLFLSDEKPS 220 Query: 161 VEGLFDVIVSN 171 + DV+V+N Sbjct: 221 -DLKADVVVAN 230 >gi|297571643|ref|YP_003697417.1| methyltransferase [Arcanobacterium haemolyticum DSM 20595] gi|296931990|gb|ADH92798.1| methyltransferase [Arcanobacterium haemolyticum DSM 20595] Length = 187 Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust. Identities = 40/142 (28%), Positives = 60/142 (42%), Gaps = 36/142 (25%) Query: 93 IEKRDVVR---ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 +E RD V +LDL G+GA+ L L + +GVD + +A+ +NA + Sbjct: 36 LEHRDFVDGCDVLDLFAGSGALALEALSRG-ATRAIGVDSAEEAIRAMNANARETQLP-- 92 Query: 150 FDTLQSDWFSSV-----EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204 ++S + V +G FDVI+ +PPY DF D + + Sbjct: 93 LKAIKSQVLTYVSQPGTDGPFDVIILDPPY--------------DFP-----DDSLTAIL 133 Query: 205 HYRTIADGVSRHLNKDGLCSVE 226 H + RHL DGL VE Sbjct: 134 HE------LPRHLKSDGLVVVE 149 >gi|256027760|ref|ZP_05441594.1| methyltransferase [Fusobacterium sp. D11] gi|289765717|ref|ZP_06525095.1| methyltransferase [Fusobacterium sp. D11] gi|289717272|gb|EFD81284.1| methyltransferase [Fusobacterium sp. D11] Length = 182 Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust. Identities = 34/126 (26%), Positives = 59/126 (46%), Gaps = 10/126 (7%) Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 R+ + F+ RP E + +S + P I K V LDL +G+G++ L + + Sbjct: 11 RIIKTRKGFDTRPTLESVKESLFSIITPYI-KGSV--FLDLFSGSGSISLEAISRGAK-R 66 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPPYIES 177 V ++ +AL+ N G S+R ++D ++E L FD+I +PPY ++ Sbjct: 67 AVMIEKDGEALKYIIENIDNLGFSDRCRAYKNDVVRAIEILGRKNEKFDIIFMDPPYQDN 126 Query: 178 VIVDCL 183 V L Sbjct: 127 VTKKVL 132 >gi|295835991|ref|ZP_06822924.1| methyltransferase type 12 [Streptomyces sp. SPB74] gi|197699359|gb|EDY46292.1| methyltransferase type 12 [Streptomyces sp. SPB74] Length = 525 Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust. Identities = 26/82 (31%), Positives = 39/82 (47%), Gaps = 1/82 (1%) Query: 69 SDTFEPRP-ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 ++T EP P L A L + R+LDLG G G + LLK+ F + + Sbjct: 293 TETGEPGPSRPATLASHRRAAILEALRAAHAARVLDLGCGEGTLVSELLKDPRFTHVLAM 352 Query: 128 DISCKALEIAKSNAVTNGVSER 149 D+S +AL+IA + + ER Sbjct: 353 DVSQRALQIAARRLHVDRMPER 374 >gi|209548146|ref|YP_002280063.1| Cyclopropane-fatty-acyl-phospholipid synthase [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209533902|gb|ACI53837.1| Cyclopropane-fatty-acyl-phospholipid synthase [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 419 Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust. Identities = 21/71 (29%), Positives = 40/71 (56%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 RIL++G+G G + + L + + + G+ +S + L++++S A G++ER D+ + Sbjct: 176 RILEIGSGWGGMGMYLTEATEGAEFTGITLSEEQLKVSRSRAEKRGLAERVRFELQDYRT 235 Query: 160 SVEGLFDVIVS 170 FD IVS Sbjct: 236 LTGRKFDRIVS 246 >gi|160934888|ref|ZP_02082274.1| hypothetical protein CLOLEP_03763 [Clostridium leptum DSM 753] gi|156866341|gb|EDO59713.1| hypothetical protein CLOLEP_03763 [Clostridium leptum DSM 753] Length = 246 Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust. Identities = 32/113 (28%), Positives = 51/113 (45%), Gaps = 14/113 (12%) Query: 67 LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126 L ++T +T LL D F LP K+ V +LG G GA+ + L+E P Sbjct: 18 LVNETHHFGTDTILLAD----FCLPVKGKQAV----ELGAGCGAISMIWLREQPPAHITA 69 Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-----GLFDVIVSNPPY 174 V+I +A+++ + N E L+ D ++ G D++ NPPY Sbjct: 70 VEIQEEAVDLLRRTVKYNEKEELVTVLRED-LRQLQGKLPMGAMDLVACNPPY 121 >gi|330508804|ref|YP_004385232.1| methyltransferase [Methanosaeta concilii GP-6] gi|328929612|gb|AEB69414.1| methyltransferase, putative [Methanosaeta concilii GP-6] Length = 277 Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust. Identities = 30/99 (30%), Positives = 51/99 (51%), Gaps = 6/99 (6%) Query: 76 PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVC-LALLKESPFFKGVGVDISCKAL 134 PE+ L + +L + + ++V LD+G+G G C LA + P K +GVDI+ + + Sbjct: 59 PESNLGLGCGNPVALASLSEGEIV--LDMGSGAGFDCFLASDRVGPSGKVIGVDITSEMV 116 Query: 135 EIAKSNAVTNGVSERFDTLQSDW--FSSVEGLFDVIVSN 171 E A++N+ G + D Q D + DV++SN Sbjct: 117 EKARANSRKGGYA-NIDFRQGDLENMPVADNYVDVVISN 154 >gi|327467251|gb|EGF12755.1| type I restriction-modification system DNA-methyltransferase [Streptococcus sanguinis SK330] Length = 533 Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust. Identities = 31/112 (27%), Positives = 52/112 (46%), Gaps = 13/112 (11%) Query: 72 FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV---GVD 128 + P+P +L+ + +AF L R E + D G+G++ L K S + V G + Sbjct: 199 YTPQPVAKLM--TQIAF-LGR-EDEQGFTLYDATMGSGSLLLNAKKYSHQPQTVQYFGQE 254 Query: 129 ISCKALEIAKSNAVTNGVS------ERFDTLQSDWFSSVEGLFDVIVSNPPY 174 ++ +A+ N + +GV DTL DW + FD ++ NPPY Sbjct: 255 LNTSTYNLARMNMILHGVPVENQFLHNADTLDEDWPTQEPTNFDGVLMNPPY 306 >gi|325690228|gb|EGD32232.1| ribosomal RNA small subunit methyltransferase D [Streptococcus sanguinis SK115] Length = 182 Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust. Identities = 33/131 (25%), Positives = 59/131 (45%), Gaps = 16/131 (12%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+LDL +G+G + + + + V+ +A I N ERFD L+ + Sbjct: 47 RVLDLYSGSGGLAIEAISRG-METAILVEKDRRAQAIISENIQMTKEPERFDLLKMESGR 105 Query: 160 SVE---GLFDVIVSNPPYI-ESVIVDCLGLE-----------VRDFDPRISLDGGIDGLS 204 ++E G FD+++ +PPY E ++ D LE V + + + L I GL Sbjct: 106 ALEMLTGAFDLVLLDPPYAKEQIVADLEKLEEGQLLSQDVLVVCETEKEVELPEEIAGLG 165 Query: 205 HYRTIADGVSR 215 ++ G+S+ Sbjct: 166 IWKQKIYGISK 176 >gi|307353043|ref|YP_003894094.1| type 11 methyltransferase [Methanoplanus petrolearius DSM 11571] gi|307156276|gb|ADN35656.1| Methyltransferase type 11 [Methanoplanus petrolearius DSM 11571] Length = 242 Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust. Identities = 32/130 (24%), Positives = 61/130 (46%), Gaps = 11/130 (8%) Query: 59 DFYNVRLTLSSDTFEPRPETELLV-DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117 D++N R T + F + E+ V L+ +P + +R ++GTG G + LAL Sbjct: 13 DYWNWRSTTYHEEFSDLIKEEMEVWKKTLSEYIP---EGKTIRAAEIGTGPGVLALALAD 69 Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNP----- 172 GVD+S + ++ A + A G+ +F ++ S +G +D+++S Sbjct: 70 LG--HSATGVDLSEEMIKKAANRAEELGIDAKFMQGDAENLSLDDGAYDLVISKYLMWTL 127 Query: 173 PYIESVIVDC 182 P+ E + +C Sbjct: 128 PHPEKFLEEC 137 >gi|170029884|ref|XP_001842821.1| HemK methyltransferase family member 2 [Culex quinquefasciatus] gi|167864803|gb|EDS28186.1| HemK methyltransferase family member 2 [Culex quinquefasciatus] Length = 222 Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust. Identities = 37/133 (27%), Positives = 59/133 (44%), Gaps = 16/133 (12%) Query: 102 LDLGTGTGAVCLALLK---ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 L++G G+G + AL K F +GVDI+ KA + N D + D Sbjct: 46 LEIGPGSGIIISALAKVLANGALF--LGVDINPKACRMTARTREMNECP--VDVVNMDLV 101 Query: 159 SS-VEGLFDVIVSNPPYIESVIVDC---LGLEVRDFDPRI-----SLDGGIDGLSHYRTI 209 V G+ D++V NPPY+ + DC L + F + S GG DG++ + Sbjct: 102 GGFVPGVVDLLVFNPPYVPTSEEDCPKELEEHIGQFGEGLHDLVKSWAGGCDGMAVTNRV 161 Query: 210 ADGVSRHLNKDGL 222 + R L+ +G+ Sbjct: 162 LATLDRILSPEGV 174 >gi|118463092|ref|YP_883670.1| methyltransferase small domain-containing protein [Mycobacterium avium 104] gi|254776972|ref|ZP_05218488.1| methyltransferase small domain-containing protein [Mycobacterium avium subsp. avium ATCC 25291] gi|118164379|gb|ABK65276.1| methyltransferase small domain family protein [Mycobacterium avium 104] Length = 249 Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust. Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 7/78 (8%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDI-----SCKALEIAKSNAVTNGVSERFDTLQS 155 +LDLG G GAV LA K P + +GVD+ + + + +NA GV++R + + Sbjct: 93 LLDLGCGRGAVLLAAAKRLPRGRAIGVDLWQADQTDNSEQATLANAAAEGVADRVELHTA 152 Query: 156 DW--FSSVEGLFDVIVSN 171 D + DV+VSN Sbjct: 153 DMTALPLADESVDVVVSN 170 >gi|86738912|ref|YP_479312.1| N-6 DNA methylase [Frankia sp. CcI3] gi|86565774|gb|ABD09583.1| N-6 DNA methylase [Frankia sp. CcI3] Length = 583 Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust. Identities = 40/131 (30%), Positives = 55/131 (41%), Gaps = 19/131 (14%) Query: 58 RDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRIL-DLGTGTGAVCLALL 116 R F S D + PR LLVD A + + +VR L D GTG + LAL Sbjct: 158 RKFNEAANETSGDHYTPRDAIRLLVDLLFAEKEADLSEAGIVRTLYDPTAGTGGM-LALA 216 Query: 117 KESPFFKGVGVDIS-------------CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG 163 +E + ++S CK+ +AK + TN +TL D F + Sbjct: 217 EEHLLAQNPDANLSLYGQEYNPQSYAICKSDLLAKGHDATNIAFG--NTLTDDAFKGRK- 273 Query: 164 LFDVIVSNPPY 174 FD +SNPPY Sbjct: 274 -FDFCMSNPPY 283 >gi|41410195|ref|NP_963031.1| hypothetical protein MAP4097 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41399029|gb|AAS06647.1| hypothetical protein MAP_4097 [Mycobacterium avium subsp. paratuberculosis K-10] Length = 257 Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust. Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 7/78 (8%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDI-----SCKALEIAKSNAVTNGVSERFDTLQS 155 +LDLG G GAV LA K P + +GVD+ + + + +NA GV++R + + Sbjct: 101 LLDLGCGRGAVLLAAAKRLPRGRAIGVDLWQADQTDNSEQATLANAAAEGVADRVELHTA 160 Query: 156 DW--FSSVEGLFDVIVSN 171 D + DV+VSN Sbjct: 161 DMTALPLADESVDVVVSN 178 >gi|312883994|ref|ZP_07743711.1| ribosomal RNA small subunit methyltransferase C [Vibrio caribbenthicus ATCC BAA-2122] gi|309368452|gb|EFP95987.1| ribosomal RNA small subunit methyltransferase C [Vibrio caribbenthicus ATCC BAA-2122] Length = 340 Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust. Identities = 30/97 (30%), Positives = 46/97 (47%), Gaps = 11/97 (11%) Query: 78 TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137 ++LL+D+ LP I+ + +LD G G G + + K +P + DIS AL +A Sbjct: 190 SQLLLDN-----LPDIDGK----VLDFGCGAGVIGCVIAKLNPDIELEMCDIS--ALAVA 238 Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174 S A + SD +S + IVSNPP+ Sbjct: 239 SSQATLERNQLNGNVFASDVYSDTGSDYHFIVSNPPF 275 >gi|296118142|ref|ZP_06836723.1| pyridine nucleotide-disulfide oxidoreductase domain protein [Corynebacterium ammoniagenes DSM 20306] gi|295968700|gb|EFG81944.1| pyridine nucleotide-disulfide oxidoreductase domain protein [Corynebacterium ammoniagenes DSM 20306] Length = 583 Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust. Identities = 22/57 (38%), Positives = 30/57 (52%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 RI++LG+GTG +AL + P VDIS + L+ A GV ER Q+D Sbjct: 51 RIVELGSGTGDNVIALAQRFPHADVHAVDISSELLDTVSVAATQAGVRERVRLHQAD 107 >gi|256375106|ref|YP_003098766.1| N-6 DNA methylase [Actinosynnema mirum DSM 43827] gi|255919409|gb|ACU34920.1| N-6 DNA methylase [Actinosynnema mirum DSM 43827] Length = 677 Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust. Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 5/77 (6%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVG--VDISCKALEIAKSNAVTNGVSERF-DTLQSDW 157 + D GTGA+ A ++ P + VG +D S + IA+ S R D+L++D Sbjct: 160 VFDPACGTGALLRAAVRSEPGIRPVGQELDPSLAQVAIARLAFAAGEASVRSGDSLRNDA 219 Query: 158 FSSVEGLFDVIVSNPPY 174 F + + DV+VSNPP+ Sbjct: 220 FPEL--VADVVVSNPPF 234 >gi|241895464|ref|ZP_04782760.1| site-specific DNA-methyltransferase (adenine-specific), HsdM subunit [Weissella paramesenteroides ATCC 33313] gi|241871438|gb|EER75189.1| site-specific DNA-methyltransferase (adenine-specific), HsdM subunit [Weissella paramesenteroides ATCC 33313] Length = 517 Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust. Identities = 21/80 (26%), Positives = 42/80 (52%), Gaps = 8/80 (10%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS------ERFDTLQ 154 + D G+G++ L + + G +++ + + N + +GVS ++ DTL+ Sbjct: 228 VYDPTMGSGSLLLRIGDYATVGNYYGQELNRTTYNLGRMNLLMHGVSYNQFSVQQGDTLE 287 Query: 155 SDWFSSVEGLFDVIVSNPPY 174 +D+F + FD +V+NPPY Sbjct: 288 NDYFEGQQ--FDAVVANPPY 305 >gi|164688031|ref|ZP_02212059.1| hypothetical protein CLOBAR_01676 [Clostridium bartlettii DSM 16795] gi|164602444|gb|EDQ95909.1| hypothetical protein CLOBAR_01676 [Clostridium bartlettii DSM 16795] Length = 524 Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust. Identities = 26/84 (30%), Positives = 42/84 (50%), Gaps = 8/84 (9%) Query: 97 DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS-ERF----- 150 DV+ D G+G++ L L K + G +++ +A+ N + +GV + F Sbjct: 223 DVLSAADPTCGSGSLLLRLNKYANVRTFFGQELTSTTYNLARMNMILHGVPYQNFTIYNG 282 Query: 151 DTLQSDWFSSVEGLFDVIVSNPPY 174 DTL+ D F E F + V+NPPY Sbjct: 283 DTLEEDHFE--ENKFRIQVANPPY 304 >gi|326498625|dbj|BAK02298.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 403 Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust. Identities = 28/86 (32%), Positives = 44/86 (51%), Gaps = 14/86 (16%) Query: 74 PRPE-TELLVDSALAFS--------LPRIEKRDVVR----ILDLGTGTGAVCLALLKESP 120 P P+ T +++D LAF L + RD ++ +LD GTGTG + +A LK Sbjct: 205 PDPQATNIIIDPGLAFGTGEHPTTKLCLLFLRDAIKGGEHVLDYGTGTGVLGIAALKMGA 264 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGV 146 G+DI +A+ A+ N + NG+ Sbjct: 265 ALS-TGIDIDPQAVSSARQNMLLNGM 289 >gi|302880075|ref|YP_003848639.1| 50S ribosomal protein L11 methyltransferase [Gallionella capsiferriformans ES-2] gi|302582864|gb|ADL56875.1| ribosomal protein L11 methyltransferase [Gallionella capsiferriformans ES-2] Length = 297 Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust. Identities = 23/72 (31%), Positives = 39/72 (54%), Gaps = 4/72 (5%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+LD G G+G + +A +K VGVD+ +A+ ++ NA N V E L + Sbjct: 167 RVLDYGCGSGILAIAAIKLG-AAHAVGVDVDAQAVTASRDNATANDVHEVAFYLPN---Q 222 Query: 160 SVEGLFDVIVSN 171 + G +D++V+N Sbjct: 223 APGGQYDLVVAN 234 >gi|241763998|ref|ZP_04762038.1| Methyltransferase type 11 [Acidovorax delafieldii 2AN] gi|241366672|gb|EER61137.1| Methyltransferase type 11 [Acidovorax delafieldii 2AN] Length = 220 Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust. Identities = 22/71 (30%), Positives = 32/71 (45%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 + D G GTG + L P + GVD L +A+ A + RFD S + Sbjct: 50 VSDAGCGTGTLALLAATACPQARVTGVDADPAILSLARRKAASVAAPIRFDEGLSTYLPY 109 Query: 161 VEGLFDVIVSN 171 +G FD +VS+ Sbjct: 110 GDGSFDRVVSS 120 >gi|227830362|ref|YP_002832142.1| methylase [Sulfolobus islandicus L.S.2.15] gi|227456810|gb|ACP35497.1| methylase [Sulfolobus islandicus L.S.2.15] Length = 207 Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust. Identities = 41/155 (26%), Positives = 70/155 (45%), Gaps = 27/155 (17%) Query: 53 RILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG--A 110 RI+ +R F +L L+ T+EP +T++L++ L ++ K + ++LD+G+G+G Sbjct: 5 RIVEFRGF---KLCLNDQTYEPSDDTDILLN------LLKVGKGE--KVLDMGSGSGILG 53 Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIV 169 + ++ F + + L K N + N L D S + FDV + Sbjct: 54 IWSLIMGGKVMFVDINPYATTSTLCSLKVNNLYNS-PNYLGVLNCDLLSCLRKYDFDVAI 112 Query: 170 SNPPYIESVIVDCLGLEVRDFDPRI--SLDGGIDG 202 NPPY L V +++ I S GG DG Sbjct: 113 FNPPY----------LPVEEYNEWIGYSWSGGKDG 137 >gi|261400540|ref|ZP_05986665.1| ribosomal protein L11 methyltransferase [Neisseria lactamica ATCC 23970] gi|269209607|gb|EEZ76062.1| ribosomal protein L11 methyltransferase [Neisseria lactamica ATCC 23970] Length = 245 Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust. Identities = 27/74 (36%), Positives = 38/74 (51%), Gaps = 11/74 (14%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDW 157 +LD G G+G + +A LK VGVDI +A+ + NA N V +F + L S Sbjct: 117 VLDYGCGSGILTIAALKLGA-GSAVGVDIDEQAVRAGRDNAAQNNVDAQFYLPEQLPS-- 173 Query: 158 FSSVEGLFDVIVSN 171 G FDV+V+N Sbjct: 174 -----GQFDVVVAN 182 >gi|169627497|ref|YP_001701146.1| methyltransferase [Mycobacterium abscessus ATCC 19977] gi|169239464|emb|CAM60492.1| Possible methyltransferase [Mycobacterium abscessus] Length = 232 Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust. Identities = 29/98 (29%), Positives = 44/98 (44%), Gaps = 13/98 (13%) Query: 73 EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCK 132 EP+PE +L+ E + +LD G G A L L + VG+D + K Sbjct: 36 EPQPEIAMLI----------AEGKVRGEVLDAGCGEAATSLYLAEVG--HTTVGLDSAPK 83 Query: 133 ALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEGLFDVIV 169 A+E+AK A G++ F F+ +G FD I+ Sbjct: 84 AIELAKGYAAERGLTNASFAVADISSFTGYDGRFDTII 121 >gi|67923204|ref|ZP_00516691.1| UbiE/COQ5 methyltransferase [Crocosphaera watsonii WH 8501] gi|67854935|gb|EAM50207.1| UbiE/COQ5 methyltransferase [Crocosphaera watsonii WH 8501] Length = 199 Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust. Identities = 18/38 (47%), Positives = 25/38 (65%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAK 138 +LDLG GTG + L K P KG+GVD+S + L+ A+ Sbjct: 48 VLDLGCGTGRLLNRLAKNFPELKGIGVDLSPQMLKEAR 85 >gi|226946159|ref|YP_002801232.1| rRNA (guanine-N(2)-)-methyltransferase [Azotobacter vinelandii DJ] gi|226721086|gb|ACO80257.1| rRNA (guanine-N(2)-)-methyltransferase [Azotobacter vinelandii DJ] Length = 333 Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust. Identities = 26/100 (26%), Positives = 43/100 (43%), Gaps = 2/100 (2%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 +D A L R++ +LD G G G + L + P + + +D+ AL ++ Sbjct: 176 LDRGTALLLERLDGLPPGDLLDFGCGAGVLGALLKRRYPQSRVILLDVDAFALASSRLTL 235 Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181 NG+ + T+ D IVSNPP+ + V D Sbjct: 236 AANGLEAQ--TIAGDGIRDAPDGLAAIVSNPPFHQGVHTD 273 >gi|196231067|ref|ZP_03129927.1| Methyltransferase type 12 [Chthoniobacter flavus Ellin428] gi|196224897|gb|EDY19407.1| Methyltransferase type 12 [Chthoniobacter flavus Ellin428] Length = 258 Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust. Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 3/70 (4%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 RIL++G G G +C + + P + VG+DIS +++E A+ +S L+ Sbjct: 47 RILEIGCGVGDICWRMRRRWPESEVVGLDISARSIETARRLFGDEKLSFVEGELKP---G 103 Query: 160 SVEGLFDVIV 169 +V G FD+IV Sbjct: 104 TVHGPFDLIV 113 >gi|323304494|gb|EGA58260.1| YIL064W-like protein [Saccharomyces cerevisiae FostersB] Length = 249 Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust. Identities = 44/185 (23%), Positives = 85/185 (45%), Gaps = 22/185 (11%) Query: 69 SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128 SD+ + + LVD+ A+ RI + ++DLGTG G + L + K VG+D Sbjct: 62 SDSDAEQKMIDFLVDNIGAY---RISEN--ASVVDLGTGNGHMLFELHQTEFQGKLVGID 116 Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSS--VEGLFDVIVSNPPYIESVIVDCLGLE 186 S +++++A + A GV Q+D FS G +D++ ++ +D + L Sbjct: 117 YSEESVKLASNIAEATGVDNFISFQQADIFSGDWXPGKYDIV------LDKGTLDAISL- 169 Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246 + ++G +D + Y + + + L KDG+ + + ++V+I E+ L + Sbjct: 170 -----SGMKINGKLDVVDVYAGVVEXI---LXKDGIFLITSCNFTQDELVKIIETDNLKM 221 Query: 247 VNAFK 251 K Sbjct: 222 WKTIK 226 >gi|318059292|ref|ZP_07978015.1| methyltransferase [Streptomyces sp. SA3_actG] gi|318078486|ref|ZP_07985818.1| methyltransferase [Streptomyces sp. SA3_actF] Length = 516 Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust. Identities = 19/53 (35%), Positives = 31/53 (58%) Query: 97 DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 + R+LDLG G G + LLK++ F + +D+S +AL+IA + + ER Sbjct: 318 NATRVLDLGCGEGTLVRELLKDTRFTHVLAMDVSQRALQIAARRLRVDRMPER 370 >gi|313206748|ref|YP_004045925.1| mannose-1-phosphate guanylyltransferase (gdp) [Riemerella anatipestifer DSM 15868] gi|312446064|gb|ADQ82419.1| mannose-1-phosphate guanylyltransferase (GDP) [Riemerella anatipestifer DSM 15868] Length = 362 Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust. Identities = 26/94 (27%), Positives = 46/94 (48%), Gaps = 3/94 (3%) Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI-GYNQ 231 P E + +D +E D I D G L + ++ D ++ ++ + S I YN Sbjct: 244 PKAEKISIDNGIMEKADNVYVIPADLGWSDLGTWNSVYDNAEKNDEQNSINSKYILTYNS 303 Query: 232 KVDVVRIFESRKLFLVNAFKDY--GGNDRVLLFC 263 K +V+R+ ES KL +++ +DY ++ LL C Sbjct: 304 KGNVIRLKESNKLAIIDGLQDYIVVDTEKALLIC 337 >gi|323343167|ref|ZP_08083398.1| methyltransferase domain protein [Erysipelothrix rhusiopathiae ATCC 19414] gi|322463231|gb|EFY08426.1| methyltransferase domain protein [Erysipelothrix rhusiopathiae ATCC 19414] Length = 194 Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust. Identities = 26/80 (32%), Positives = 44/80 (55%), Gaps = 17/80 (21%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGV---GVDISCKALEIAKSNAV---TNGVSERFDTL 153 ++ DLG G G V + L S FF + GVD++ +++E+A N NG+++ D L Sbjct: 60 KVADLGCGIGVVGVIL---SHFFSDLEMTGVDVNPRSVELANINYEKYNVNGINKIQDGL 116 Query: 154 QSDWFSSVEGLFDVIVSNPP 173 +G++D ++SNPP Sbjct: 117 --------DGMYDFVISNPP 128 >gi|302522464|ref|ZP_07274806.1| methyltransferase type 12 [Streptomyces sp. SPB78] gi|302431359|gb|EFL03175.1| methyltransferase type 12 [Streptomyces sp. SPB78] Length = 516 Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust. Identities = 19/53 (35%), Positives = 31/53 (58%) Query: 97 DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 + R+LDLG G G + LLK++ F + +D+S +AL+IA + + ER Sbjct: 318 NATRVLDLGCGEGTLVRELLKDTRFTHVLAMDVSQRALQIAARRLRVDRMPER 370 >gi|315231215|ref|YP_004071651.1| UbiE/COQ5-like methyltransferase [Thermococcus barophilus MP] gi|315184243|gb|ADT84428.1| UbiE/COQ5-like methyltransferase [Thermococcus barophilus MP] Length = 247 Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust. Identities = 31/97 (31%), Positives = 44/97 (45%), Gaps = 13/97 (13%) Query: 57 WRDFYN--VRLTLSSD-TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113 W DF++ R L T + E E L++ F LP+ +ILD+G G G + Sbjct: 6 WEDFFDREARHYLKEPFTKHTKEEVEFLLNE---FQLPK-----GAKILDVGCGVGRHSI 57 Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150 L K ++ G+DIS LE A+ A GV F Sbjct: 58 ELAKRG--YRVTGIDISQGMLEEARKRAQKEGVEVEF 92 >gi|89052980|ref|YP_508431.1| methyltransferase small [Jannaschia sp. CCS1] gi|88862529|gb|ABD53406.1| methyltransferase small [Jannaschia sp. CCS1] Length = 247 Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust. Identities = 34/120 (28%), Positives = 49/120 (40%), Gaps = 20/120 (16%) Query: 60 FYNVRLTLSSDTFEPRPETELLVDSA-LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118 F N R+ ++PR D LA + P V L+LG G G L L Sbjct: 16 FLNGRVM----AWQPRKGYRAATDPVFLAAACPATTGESV---LELGCGVGVAALCLQAR 68 Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPY 174 P + GV+ ++A+ N V D +Q+D S L FD +++NPPY Sbjct: 69 VPGVEVTGVERQAAYADLARRNGV--------DVVQADLTSLPTALRQRSFDHVIANPPY 120 >gi|323455833|gb|EGB11701.1| hypothetical protein AURANDRAFT_2373 [Aureococcus anophagefferens] Length = 394 Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust. Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 7/79 (8%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS----ERFDTLQSD 156 +LDL +G L K + GVD S A+++A+ NA NG+ E D S Sbjct: 227 VLDLYCYSGGFALNAAKHGAT-EARGVDSSATAVDLARRNAAANGLDACAFEEADV--SA 283 Query: 157 WFSSVEGLFDVIVSNPPYI 175 W + + +DV+V +PP + Sbjct: 284 WLKASDARYDVVVCDPPKL 302 >gi|313674919|ref|YP_004052915.1| 23S rRNA m(5)u-1939 methyltransferase [Marivirga tractuosa DSM 4126] gi|312941617|gb|ADR20807.1| 23S rRNA m(5)U-1939 methyltransferase [Marivirga tractuosa DSM 4126] Length = 466 Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust. Identities = 36/114 (31%), Positives = 57/114 (50%), Gaps = 15/114 (13%) Query: 72 FEPRPETELLVDSALAFSLPRIEKRDVVR------ILDLGTGTGAVCLALLKESPFFKGV 125 F+ P++ +S A+ L ++ RD + DL TGTG + L K + K + Sbjct: 289 FKIGPKSFYQTNSDQAYELYKV-ARDFANLKGEETVYDLYTGTGTIANFLAKSAK--KVI 345 Query: 126 GVDISCKALEIAKSNAVTNGV--SERFDTLQSDWFSS---VE-GLFDVIVSNPP 173 GV+ +A+E AK N+ N + +E F D F+ VE G DVI+++PP Sbjct: 346 GVEYVTEAIEDAKVNSKLNEIENTEFFSGDMKDVFNDEFLVEHGKADVIITDPP 399 >gi|288924992|ref|ZP_06418928.1| ribosomal protein L11 methyltransferase [Prevotella buccae D17] gi|288338182|gb|EFC76532.1| ribosomal protein L11 methyltransferase [Prevotella buccae D17] Length = 288 Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust. Identities = 33/96 (34%), Positives = 47/96 (48%), Gaps = 10/96 (10%) Query: 78 TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137 T ++V + L L D RILD G GTG + +A K + VG DI ++E Sbjct: 139 TRMMVSTLLNMDL------DGKRILDCGCGTGILGIAAAKMGA-REVVGYDIDEWSVENT 191 Query: 138 KSNAVTNGVSERFDTLQSDW--FSSVEGLFDVIVSN 171 + NA N V E + D + V GLFDV+++N Sbjct: 192 RHNAELNHV-ENLEVYHGDAHVLNHVNGLFDVVLAN 226 >gi|257388443|ref|YP_003178216.1| methyltransferase type 11 [Halomicrobium mukohataei DSM 12286] gi|257170750|gb|ACV48509.1| Methyltransferase type 11 [Halomicrobium mukohataei DSM 12286] Length = 210 Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust. Identities = 21/46 (45%), Positives = 28/46 (60%), Gaps = 2/46 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146 +LDLGTGTGA+ L L + + VG DIS LE A++ A G+ Sbjct: 47 VLDLGTGTGAIALPLADAAA--EVVGRDISEGMLEQARTKATERGI 90 >gi|89075352|ref|ZP_01161774.1| ribosomal protein L11 methyltransferase [Photobacterium sp. SKA34] gi|89048901|gb|EAR54470.1| ribosomal protein L11 methyltransferase [Photobacterium sp. SKA34] Length = 294 Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust. Identities = 32/112 (28%), Positives = 57/112 (50%), Gaps = 17/112 (15%) Query: 74 PRPET-ELLVDSALAFS----------LPRIEKRDVV--RILDLGTGTGAVCLALLKESP 120 P P+ +L+D LAF L ++ +D+ ++D G G+G + +A LK Sbjct: 123 PEPDAVNVLLDPGLAFGTGTHPTTSLCLEWLDGQDLTGKTVIDFGCGSGILAIAALKLG- 181 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFSSVEGLFDVIVSN 171 K +G+DI +A+ ++ NA NGVS+ + L D ++ D++V+N Sbjct: 182 AEKVIGIDIDPQAILASRDNAERNGVSDNLELYLPQDQPQGIQA--DIVVAN 231 >gi|315586430|gb|ADU40811.1| type I restriction enzyme M protein [Helicobacter pylori 35A] Length = 543 Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust. Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 21/96 (21%) Query: 94 EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD--------ISCKALEIAKSNAVTNG 145 E V+I D GTG + +AL + +G D IS K+L++ K N + N Sbjct: 226 EPTQNVKIYDPSAGTGTLLMALAHQ------IGTDSCTLYAQDISQKSLKMLKLNLILND 279 Query: 146 VSERF------DTLQSDWFSS-VEGLFDVIVSNPPY 174 ++ +TL + + S +G D IVSNPP+ Sbjct: 280 LTHSLKYAIEGNTLTNPYHSKKCKGEMDYIVSNPPF 315 >gi|229542669|ref|ZP_04431729.1| RNA methyltransferase, TrmA family [Bacillus coagulans 36D1] gi|229327089|gb|EEN92764.1| RNA methyltransferase, TrmA family [Bacillus coagulans 36D1] Length = 457 Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust. Identities = 32/120 (26%), Positives = 62/120 (51%), Gaps = 15/120 (12%) Query: 62 NVRLTLSSDTF-EPRP-ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119 +++ +S+ +F + P +T++L + AL ++ E ++D G G + L L +++ Sbjct: 276 DIKFAISAPSFYQVNPVQTKVLYEKALEYA----ELTGSETVIDAYCGIGTISLFLAQKA 331 Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSE------RFDTLQSDWFSSVEGLFDVIVSNPP 173 K GV+I +A+E AK NA NG++ +T+ W+ + DV+V +PP Sbjct: 332 --RKVFGVEIVPEAIEDAKRNAALNGITNVEFEAGTAETVIPKWYEAGNKA-DVLVVDPP 388 >gi|333025546|ref|ZP_08453610.1| putative methyltransferase type 12 [Streptomyces sp. Tu6071] gi|332745398|gb|EGJ75839.1| putative methyltransferase type 12 [Streptomyces sp. Tu6071] Length = 308 Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust. Identities = 21/57 (36%), Positives = 28/57 (49%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 I+DLG+GTGA ALL P VD S L+ + A G+ R T+ +D Sbjct: 81 HIVDLGSGTGAGTFALLARFPEAHVTAVDSSAPHLQRLREKACAAGLDGRVRTVHAD 137 >gi|323701207|ref|ZP_08112882.1| Eco57I restriction endonuclease [Desulfotomaculum nigrificans DSM 574] gi|323533809|gb|EGB23673.1| Eco57I restriction endonuclease [Desulfotomaculum nigrificans DSM 574] Length = 493 Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust. Identities = 31/101 (30%), Positives = 42/101 (41%), Gaps = 29/101 (28%) Query: 99 VRILDLGTGTGAVCLALL----KESPFFKGVGVDIS--------------------CKAL 134 + ILD G GTG + LAL+ KES F K + VD+ C Sbjct: 51 ISILDPGAGTGLLTLALIEKIIKES-FVKHISVDLFENDESLLPVLEENLRLIQEFCSQK 109 Query: 135 EIAKSNAVTNGVSERFDTLQSD-WFSSVEGLFDVIVSNPPY 174 E+ + N E F + D W E +D+I+ NPPY Sbjct: 110 EVHLIYKIYN---ENFISYNQDCWTEECEPKYDIIIGNPPY 147 >gi|261403896|ref|YP_003240137.1| methyltransferase small [Paenibacillus sp. Y412MC10] gi|261280359|gb|ACX62330.1| methyltransferase small [Paenibacillus sp. Y412MC10] Length = 255 Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust. Identities = 26/98 (26%), Positives = 47/98 (47%), Gaps = 7/98 (7%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 +D+ L I +R RILD+ TG G + + LL G++I + ++A+ + Sbjct: 35 MDAVLLARFASIPRRG--RILDMCTGNGVIPI-LLSTRTGAPIEGIEIQPRLADMARRSV 91 Query: 142 VTNGVSERFDTLQSD----WFSSVEGLFDVIVSNPPYI 175 V N + ++ + D + G +D+I NPPY+ Sbjct: 92 VMNDLQDQITIHEGDLRELYKEKGYGAYDLITVNPPYM 129 >gi|255721473|ref|XP_002545671.1| conserved hypothetical protein [Candida tropicalis MYA-3404] gi|240136160|gb|EER35713.1| conserved hypothetical protein [Candida tropicalis MYA-3404] Length = 222 Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust. Identities = 39/158 (24%), Positives = 70/158 (44%), Gaps = 12/158 (7%) Query: 95 KRDVVRILDLGTGTGAVCLALLKES-PFFKGVGVDI---SCKA-LEIAKSNAVTNGVSER 149 K + + ++GTG+G V + K P + DI +CK +E + N + Sbjct: 41 KESIPFVTEIGTGSGIVTTFIAKNVLPKAMFLATDINPHACKTVIETMRCNKENPQDAYL 100 Query: 150 FDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDP---RISLDGGIDGLSH 205 D+ Q S+V D++V NPPY+ + + + +D DP ++L GG DG+ Sbjct: 101 IDSTQMSLTSAVRPHTIDILVFNPPYVPA--SEIPEIPTQDEDPVWLDLALVGGEDGMVV 158 Query: 206 YRTIADGVSRHLNKDGLCSVEI-GYNQKVDVVRIFESR 242 + D + + L+ +G+ + N+ V I R Sbjct: 159 TWKVLDCLEQTLSSNGIAYILFCARNKPESVAEIMRER 196 >gi|237737638|ref|ZP_04568119.1| ribosomal protein L11 methyltransferase [Fusobacterium mortiferum ATCC 9817] gi|229419518|gb|EEO34565.1| ribosomal protein L11 methyltransferase [Fusobacterium mortiferum ATCC 9817] Length = 309 Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust. Identities = 33/104 (31%), Positives = 52/104 (50%), Gaps = 13/104 (12%) Query: 101 ILDLGTGTGAVCLAL--LKESPFFKGVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSDW 157 ++D+GTG+G + +A L S + G DI A+E AK N N +S E+ + D Sbjct: 175 VIDVGTGSGILMIAADRLGASEIY---GTDIDELAVESAKENLELNKISEEKAKVYKGDL 231 Query: 158 FSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200 S VE FDV+V+N ++ D L + + D + +G I Sbjct: 232 ISVVENKKFDVVVAN------ILADVLLILLHDISKVVKPNGKI 269 >gi|253702090|ref|YP_003023279.1| methyltransferase small [Geobacter sp. M21] gi|251776940|gb|ACT19521.1| methyltransferase small [Geobacter sp. M21] Length = 266 Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust. Identities = 27/79 (34%), Positives = 37/79 (46%), Gaps = 4/79 (5%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R DLGTG G + L L + V+ IA N + NG+S R + ++ D S Sbjct: 63 RCADLGTGCGVIALLLARLGENSSVAAVEFQQVMARIAARNVILNGLSGRVEVVEEDVVS 122 Query: 160 SVEGL----FDVIVSNPPY 174 FD++VSNPPY Sbjct: 123 VKSRFPVDSFDLVVSNPPY 141 >gi|160879469|ref|YP_001558437.1| methyltransferase [Clostridium phytofermentans ISDg] gi|160428135|gb|ABX41698.1| methyltransferase [Clostridium phytofermentans ISDg] Length = 185 Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust. Identities = 26/91 (28%), Positives = 45/91 (49%), Gaps = 10/91 (10%) Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 LDL +G+GA+ + L F V D S A++ K+N T + + + Q D S++ Sbjct: 46 LDLFSGSGAIGIEALSRGASF-AVFSDTSKTAVDCIKANIKTTHMEGQAEVFQKDAISTI 104 Query: 162 EGL------FDVIVSNPPY---IESVIVDCL 183 + + F +I +PPY E +I++ L Sbjct: 105 KAMEVAGKVFQIIFMDPPYNCDHEKIILEML 135 >gi|15643516|ref|NP_228562.1| ubiquinone/menaquinone biosynthesis methyltransferase, putative [Thermotoga maritima MSB8] gi|37999908|sp|Q9WZL2|UBIE_THEMA RecName: Full=Menaquinone biosynthesis methyltransferase ubiE gi|4981280|gb|AAD35835.1|AE001745_2 ubiquinone/menaquinone biosynthesis methyltransferase, putative [Thermotoga maritima MSB8] Length = 229 Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust. Identities = 18/40 (45%), Positives = 26/40 (65%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKS 139 ++LDL TGTG V L +++P + G+D S K LEIA+ Sbjct: 50 KVLDLATGTGDVARLLKRKAPHLEITGLDSSSKMLEIAEK 89 >gi|116627584|ref|YP_820203.1| type I restriction-modification system methyltransferase subunit [Streptococcus thermophilus LMD-9] gi|116100861|gb|ABJ66007.1| Type I restriction-modification system methyltransferase subunit [Streptococcus thermophilus LMD-9] Length = 534 Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust. Identities = 30/112 (26%), Positives = 54/112 (48%), Gaps = 13/112 (11%) Query: 72 FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV---GVD 128 + P+P +L+ + +AF L R +K+ + D G+G++ L + S + V G + Sbjct: 200 YTPQPVAKLM--TQIAF-LGREDKQGFT-LYDATMGSGSLLLNAKRYSRQPQTVVYFGQE 255 Query: 129 ISCKALEIAKSNAVTNGVS------ERFDTLQSDWFSSVEGLFDVIVSNPPY 174 ++ +A+ N + +GV DTL DW + FD ++ NPPY Sbjct: 256 LNTSTYNLARMNMILHGVPIENQFLHNADTLDEDWPTQEPTNFDGVLMNPPY 307 >gi|323497938|ref|ZP_08102947.1| ribosomal RNA small subunit methyltransferase C [Vibrio sinaloensis DSM 21326] gi|323316983|gb|EGA69985.1| ribosomal RNA small subunit methyltransferase C [Vibrio sinaloensis DSM 21326] Length = 376 Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust. Identities = 39/157 (24%), Positives = 73/157 (46%), Gaps = 18/157 (11%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN-GVSERFDTLQS--- 155 +++DLG G G + + L + +P + VD S ++E A N G + F + + Sbjct: 233 KVIDLGCGNGVLSVKLGQLNPNIQLTCVDESFMSIESASKNLTEALGNNREFRCVANNCL 292 Query: 156 DWFSSVEGLFDVIVSNPPY-IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214 D FS+ + D++V NPP+ + I D + ++ + +GG + + G + Sbjct: 293 DGFSAAQA--DLVVCNPPFHQQQAITDHIAWQMFCDAKHVLNNGG-------QLLVIG-N 342 Query: 215 RHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK 251 RHL DG + G K +V + ++K ++ A K Sbjct: 343 RHLGYDGKLTRLFG---KTNVKTVAANKKFVILQATK 376 >gi|317147316|ref|XP_001822046.2| S-adenosylmethionine-dependent methyltransferase [Aspergillus oryzae RIB40] Length = 316 Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust. Identities = 21/40 (52%), Positives = 31/40 (77%), Gaps = 3/40 (7%) Query: 101 ILDLGTGTGAVCLALLKESPFFKG--VGVDISCKALEIAK 138 ILDLGTG G++ LALL++ F+G VGVD S +++E+A+ Sbjct: 103 ILDLGTGNGSM-LALLRKRGGFRGVMVGVDYSARSVELAR 141 >gi|313904064|ref|ZP_07837444.1| methyltransferase [Eubacterium cellulosolvens 6] gi|313471213|gb|EFR66535.1| methyltransferase [Eubacterium cellulosolvens 6] Length = 189 Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust. Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 12/82 (14%) Query: 102 LDLGTGTGAVCLALLK---ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 LDL G+GA+ + L +S F VD S KA+E+ K N ++++ + Q D Sbjct: 46 LDLFAGSGAIGIEALSRGAQSCCF----VDQSRKAVEVIKENLAFCRLTDQAEVYQMDAV 101 Query: 159 SSVEGL-----FDVIVSNPPYI 175 S+V+ L FDV+ +PPY+ Sbjct: 102 SAVKSLANHEPFDVVFMDPPYL 123 >gi|294496389|ref|YP_003542882.1| methyltransferase [Methanohalophilus mahii DSM 5219] gi|292667388|gb|ADE37237.1| methyltransferase [Methanohalophilus mahii DSM 5219] Length = 201 Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust. Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 6/75 (8%) Query: 101 ILDLGTGTGAVCL-ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 + D+G GTG + + A + +P + VG D KA+ +A+ NAV GV F Sbjct: 50 VFDMGCGTGILAIGAAILGTP--EVVGYDSDPKAINVARENAVLMGVEVEFVNCP---IE 104 Query: 160 SVEGLFDVIVSNPPY 174 V G + +V NPP+ Sbjct: 105 KVSGKANTVVMNPPF 119 >gi|257125253|ref|YP_003163367.1| methyltransferase [Leptotrichia buccalis C-1013-b] gi|257049192|gb|ACV38376.1| methyltransferase [Leptotrichia buccalis C-1013-b] Length = 184 Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust. Identities = 44/177 (24%), Positives = 75/177 (42%), Gaps = 18/177 (10%) Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 R S + E RP E + ++ + ++ + LDL +GTG V L + Sbjct: 11 RRIKSREGRETRPTLERIKEAIFSIIGEKVAD---AKFLDLYSGTGNVSFEALSRGAK-R 66 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPPYIES 177 + ++ +AL I N G+ E+ ++D ++E L FD+I +PPY E+ Sbjct: 67 AIMIEEDKEALRIIIENVNHLGIEEKCRAYKNDVSRAIEILARKNEIFDIIFLDPPYKEN 126 Query: 178 VIVDCLGLEVRDFDPRISLDG-GIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233 + +E + + DG I S Y +AD + + D E YN+KV Sbjct: 127 ISTKT--IEKISEENLLERDGIIISEHSTYEKMADKIGNFVKYD-----ERDYNKKV 176 >gi|229579180|ref|YP_002837578.1| methylase [Sulfolobus islandicus Y.G.57.14] gi|228009894|gb|ACP45656.1| methylase [Sulfolobus islandicus Y.G.57.14] Length = 207 Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust. Identities = 41/155 (26%), Positives = 70/155 (45%), Gaps = 27/155 (17%) Query: 53 RILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG--A 110 RI+ +R F +L L+ T+EP +T++L++ L ++ K + ++LD+G+G+G Sbjct: 5 RIVEFRGF---KLCLNDQTYEPSDDTDILLN------LLKVGKGE--KVLDMGSGSGILG 53 Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIV 169 + ++ F + + L K N + N L D S + FDV + Sbjct: 54 IWSLIMGGKVMFVDINPYATTSTLCSLKVNNLYNS-PNYLGVLNCDLLSCLRKYDFDVAI 112 Query: 170 SNPPYIESVIVDCLGLEVRDFDPRI--SLDGGIDG 202 NPPY L V +++ I S GG DG Sbjct: 113 FNPPY----------LPVEEYNEWIGYSWSGGKDG 137 >gi|221236546|ref|YP_002518983.1| methyltransferase [Caulobacter crescentus NA1000] gi|220965719|gb|ACL97075.1| methyltransferase [Caulobacter crescentus NA1000] Length = 292 Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust. Identities = 30/81 (37%), Positives = 42/81 (51%), Gaps = 3/81 (3%) Query: 92 RIEKRDVVRILDLGTGTGAVCL-ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150 R + R +LD+G G+GA A + P + VG DIS LE+A+ A G+ E Sbjct: 56 RADLRAGEAVLDVGCGSGATTFEAAWRVGPQGRAVGADISGALLELARRRAGEQGL-EGV 114 Query: 151 DTLQSDWFSSVEGL-FDVIVS 170 D +Q+D + G FD IVS Sbjct: 115 DFVQADAQTHDFGAGFDAIVS 135 >gi|149182753|ref|ZP_01861217.1| probable methyltransferase [Bacillus sp. SG-1] gi|148849519|gb|EDL63705.1| probable methyltransferase [Bacillus sp. SG-1] Length = 248 Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust. Identities = 32/91 (35%), Positives = 46/91 (50%), Gaps = 9/91 (9%) Query: 83 DSALAFSLPRIEKRDV--VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140 DS + F + E V +LD+G GTG + L LLK+ + G+D+S L IA+ Sbjct: 20 DSWVEFVQAQAEHYSVEGKGLLDIGCGTGELSLRLLKQG--YSVTGIDLSEDMLFIAREK 77 Query: 141 AVTNGVSERFDTLQSDWFSSVEGL--FDVIV 169 A + G+ Q D S +EGL FD+I Sbjct: 78 AESEGLD--LPLFQQD-MSELEGLGQFDIIT 105 >gi|117620314|ref|YP_857842.1| ribosomal protein L11 methyltransferase [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|166223392|sp|A0KNJ1|PRMA_AERHH RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11 Mtase gi|117561721|gb|ABK38669.1| ribosomal protein L11 methyltransferase [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 292 Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust. Identities = 24/72 (33%), Positives = 44/72 (61%), Gaps = 4/72 (5%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159 ++D G G+G + +A LK + +G+DI +A++ ++ NA NGV+++ + L +D Sbjct: 160 VVDFGCGSGILGIAALKLG-AARVIGIDIDPQAIQASRDNAERNGVADQIELYLPADQPQ 218 Query: 160 SVEGLFDVIVSN 171 VE DV+V+N Sbjct: 219 DVEA--DVVVAN 228 >gi|312863190|ref|ZP_07723428.1| type I restriction-modification system, M subunit [Streptococcus vestibularis F0396] gi|311100726|gb|EFQ58931.1| type I restriction-modification system, M subunit [Streptococcus vestibularis F0396] Length = 534 Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust. Identities = 30/112 (26%), Positives = 54/112 (48%), Gaps = 13/112 (11%) Query: 72 FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV---GVD 128 + P+P +L+ + +AF L R +K+ + D G+G++ L + S + V G + Sbjct: 200 YTPQPVAKLM--TQIAF-LGREDKQGFT-LYDATMGSGSLLLNAKRYSRQPQTVVYFGQE 255 Query: 129 ISCKALEIAKSNAVTNGVS------ERFDTLQSDWFSSVEGLFDVIVSNPPY 174 ++ +A+ N + +GV DTL DW + FD ++ NPPY Sbjct: 256 LNTSTYNLARMNMILHGVPIENQFLHNADTLDEDWPTQEPTNFDGVLMNPPY 307 >gi|170698892|ref|ZP_02889953.1| Methyltransferase type 11 [Burkholderia ambifaria IOP40-10] gi|170136215|gb|EDT04482.1| Methyltransferase type 11 [Burkholderia ambifaria IOP40-10] Length = 282 Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust. Identities = 24/70 (34%), Positives = 36/70 (51%), Gaps = 1/70 (1%) Query: 102 LDLGTGTGAVCLALLKE-SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 LD+G GTGAV LA+ + GVDIS + + A++ A +G+ F + + Sbjct: 53 LDVGCGTGAVTLAIARRLGTHAHCTGVDISARMIAAAQARAERDGLGASFVDADAQTHAF 112 Query: 161 VEGLFDVIVS 170 FD+IVS Sbjct: 113 APDQFDLIVS 122 >gi|167567788|ref|ZP_02360704.1| NRPS/PKS hybrid [Burkholderia oklahomensis EO147] Length = 264 Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust. Identities = 36/121 (29%), Positives = 53/121 (43%), Gaps = 18/121 (14%) Query: 54 ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113 ++GW D Y+ PR E + D LA RI +R R+L++G GTG + L Sbjct: 28 LVGWADSYD-------GAPIPRDEMRMWRDEVLA----RIRERPSRRVLEIGCGTGMLLL 76 Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL---FDVIVS 170 L F VG+D S +A+ + G+ TL ++GL FD I+ Sbjct: 77 PLAASCERF--VGLDFSAQAIARLRRVVARRGLDTV--TLVERAADELDGLARDFDTIIV 132 Query: 171 N 171 N Sbjct: 133 N 133 >gi|166363380|ref|YP_001655653.1| methyltransferase [Microcystis aeruginosa NIES-843] gi|166085753|dbj|BAG00461.1| methyltransferase [Microcystis aeruginosa NIES-843] Length = 219 Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust. Identities = 18/75 (24%), Positives = 38/75 (50%), Gaps = 2/75 (2%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE--RFDTLQSD 156 R+LD+GTGT + + + + P ++ + +D++ LEI + N + E + + + Sbjct: 43 ARVLDVGTGTARIPIMISQLRPQWQIIAIDLADSMLEIGQKNILNANCQEQIKLEKVDGK 102 Query: 157 WFSSVEGLFDVIVSN 171 FD+++SN Sbjct: 103 NLPYQSEQFDLVISN 117 >gi|166030946|ref|ZP_02233775.1| hypothetical protein DORFOR_00627 [Dorea formicigenerans ATCC 27755] gi|166029213|gb|EDR47970.1| hypothetical protein DORFOR_00627 [Dorea formicigenerans ATCC 27755] Length = 242 Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust. Identities = 23/84 (27%), Positives = 44/84 (52%), Gaps = 9/84 (10%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 + D+GT G + + L++++ K + +DI+ LE A+ + G+S+R +T SD ++ Sbjct: 20 VADIGTDHGYIPIHLIEQNLSPKVIAMDINKGPLERARIHIAGYGMSDRIETRLSDGLAA 79 Query: 161 VEGLFDVIVSNPPYIESVIVDCLG 184 V P +E +IV +G Sbjct: 80 V---------KPKEVEEIIVAGMG 94 >gi|149920227|ref|ZP_01908699.1| O-methyltransferase, putative [Plesiocystis pacifica SIR-1] gi|149818993|gb|EDM78432.1| O-methyltransferase, putative [Plesiocystis pacifica SIR-1] Length = 356 Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust. Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 4/82 (4%) Query: 90 LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 LP++ + R+LD+G TG LA P + VD+ + LE+AK+N GV+ R Sbjct: 172 LPKVFASEPARVLDVGGNTGKFALACCGHDPKVEITIVDLP-RQLELAKANLREAGVASR 230 Query: 150 FDTLQSDWFS---SVEGLFDVI 168 + + ++ ++ G DVI Sbjct: 231 VEFVAANMLDPEVALPGGHDVI 252 >gi|148240360|ref|YP_001225747.1| SAM-dependent methyltransferase [Synechococcus sp. WH 7803] gi|147848899|emb|CAK24450.1| SAM-dependent methyltransferase [Synechococcus sp. WH 7803] Length = 406 Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust. Identities = 36/115 (31%), Positives = 52/115 (45%), Gaps = 17/115 (14%) Query: 61 YNVRLTLSSDTFEPRPETELLVDSALAFSLP-RIEKRDVVRILDLGTGTGAVCLALLKES 119 YN R L S VD A+ + P R + RILD G GTG L + Sbjct: 35 YNWRWCLDS------------VDGAVRGATPVRADAGTPPRILDAGCGTGVSTDYLCHLN 82 Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV----EGLFDVIVS 170 P + + VDIS AL +A+ +G +++ +L+ + S + EG FD I S Sbjct: 83 PGAEILAVDISAGALGLARERLHRSGGAQQVRSLRQEQRSLLDLKDEGPFDYINS 137 >gi|302332146|gb|ADL22339.1| Type I restriction-modification system methyltransferase subunit, HsdM_1 [Staphylococcus aureus subsp. aureus JKD6159] Length = 518 Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust. Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 5/92 (5%) Query: 96 RDVVR-ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS-ERFDTL 153 +D +R + D G+G++ L + KE+ ++ G + + +A+ N + + V E FD Sbjct: 221 KDKLRHVYDPTCGSGSLLLRVGKETKVYRYFGQERNNTTYNLARMNMLLHDVRYENFDIR 280 Query: 154 QSDWFSSVEGL---FDVIVSNPPYIESVIVDC 182 D + L FD +++NPPY I D Sbjct: 281 NDDTLENPAFLGNTFDAVIANPPYSAKWIADS 312 >gi|262383452|ref|ZP_06076588.1| ubiquinone/menaquinone biosynthesis methyltransferase [Bacteroides sp. 2_1_33B] gi|262294350|gb|EEY82282.1| ubiquinone/menaquinone biosynthesis methyltransferase [Bacteroides sp. 2_1_33B] Length = 247 Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust. Identities = 29/110 (26%), Positives = 49/110 (44%), Gaps = 11/110 (10%) Query: 72 FEPRPETELLVDSALAFSLPRIEKRDVV---------RILDLGTGTGAVCLALLKESPFF 122 F+ ET ++ L+F + +I +R + ILD+ TGTG + +++ K+ Sbjct: 26 FDSIAETYDQLNHTLSFGIDKIWRRKGIAFLRPFSPKTILDIATGTGDLAISMYKKLRPD 85 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD--WFSSVEGLFDVIVS 170 VG DIS +E+ + G SE Q D + E FD + + Sbjct: 86 HIVGADISLGMMEVGRKKVAAAGYSEYISFEQQDCTALTYEENSFDAVTA 135 >gi|152990737|ref|YP_001356459.1| hypothetical protein NIS_0992 [Nitratiruptor sp. SB155-2] gi|151422598|dbj|BAF70102.1| conserved hypothetical protein [Nitratiruptor sp. SB155-2] Length = 233 Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust. Identities = 23/81 (28%), Positives = 44/81 (54%), Gaps = 3/81 (3%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LD+GTG+G + L + ++ P ++I + +++A NA N + + ++ Sbjct: 32 VLDVGTGSGILALLIKRDYPKASVNAIEIQERFVKMANINADAN--KKDINIYFGNFLHM 89 Query: 161 V-EGLFDVIVSNPPYIESVIV 180 V E FD IVSNPP+ + ++ Sbjct: 90 VFEKRFDWIVSNPPFYHTEVL 110 >gi|124004506|ref|ZP_01689351.1| menaquinone biosynthesis methyltransferase UbiE [Microscilla marina ATCC 23134] gi|123990078|gb|EAY29592.1| menaquinone biosynthesis methyltransferase UbiE [Microscilla marina ATCC 23134] Length = 243 Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust. Identities = 21/47 (44%), Positives = 25/47 (53%), Gaps = 1/47 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146 ILD+ TGTG +A LK P K GVDIS LE+ K G+ Sbjct: 61 HILDVATGTGDFAIAALKAKP-TKVTGVDISAGMLEVGKQKIKKKGL 106 >gi|322494680|emb|CBZ29983.1| conserved hypothetical protein [Leishmania mexicana MHOM/GT/2001/U1103] Length = 253 Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust. Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 6/63 (9%) Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162 D+G+G G VCL +L E+ K VGV+I + A+ S+R L SD FS E Sbjct: 110 DIGSGVGNVCLQVLSETKCPKSVGVEIIPSRIRAAEE------ASKRAKLLYSDVFSKKE 163 Query: 163 GLF 165 ++ Sbjct: 164 AVW 166 >gi|307637134|gb|ADN79584.1| typeI restriction enzyme-M protein [Helicobacter pylori 908] gi|325995725|gb|ADZ51130.1| type I restriction enzyme M protein [Helicobacter pylori 2018] gi|325997321|gb|ADZ49529.1| type I restriction enzyme M protein [Helicobacter pylori 2017] Length = 381 Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust. Identities = 34/112 (30%), Positives = 52/112 (46%), Gaps = 22/112 (19%) Query: 78 TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD--------I 129 T L + S +A L I+ V+I D GTG + +AL + +G D I Sbjct: 211 TPLSIASIIA-KLLVIKPTQSVKIYDPSAGTGTLLMALAHQ------IGTDSCTLYAQDI 263 Query: 130 SCKALEIAKSNAVTNGVSERF------DTLQSDWFSS-VEGLFDVIVSNPPY 174 S K+L + K N + N ++ +TL + + S +G D IVSNPP+ Sbjct: 264 SQKSLRMLKLNLILNDLTHSLRYAIEGNTLTNPYHSKDHKGKMDFIVSNPPF 315 >gi|300727710|ref|ZP_07061096.1| methyltransferase small domain protein [Prevotella bryantii B14] gi|299774998|gb|EFI71604.1| methyltransferase small domain protein [Prevotella bryantii B14] Length = 241 Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust. Identities = 25/85 (29%), Positives = 46/85 (54%), Gaps = 11/85 (12%) Query: 100 RILDLGTGTGAVCLALLKESP--FFKGVGV-DISCK-ALEIAKSNAVTNGVSERFDTLQS 155 +LD+GTGTG + L + + P F + + D +C+ A+E +++ + + F LQ Sbjct: 38 HVLDIGTGTGLLALMMAQRYPNAFVDAIDIDDAACRQAVENVRNSIFHDQICVHFMDLQK 97 Query: 156 DWFSSVEG------LFDVIVSNPPY 174 ++ ++G +D I+SNPPY Sbjct: 98 -YYLFLQGNSGDVKKYDSIISNPPY 121 >gi|269218062|ref|ZP_06161916.1| modification methylase XamI [Actinomyces sp. oral taxon 848 str. F0332] gi|269212997|gb|EEZ79337.1| modification methylase XamI [Actinomyces sp. oral taxon 848 str. F0332] Length = 538 Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust. Identities = 23/81 (28%), Positives = 40/81 (49%), Gaps = 5/81 (6%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW- 157 R++D G G+G LA K P + GVD+ A + ++N G+++R + SD+ Sbjct: 104 TRVIDPGAGSGRYLLAAAKSFPEARLFGVDVDPLAALMLRANLAACGLADRAEVRVSDFR 163 Query: 158 ---FSSVEGLFDVIVSNPPYI 175 +G + + NPPY+ Sbjct: 164 TLSLPPADG-STLFLGNPPYV 183 >gi|242399746|ref|YP_002995171.1| Probable tRNA/rRNA methyltransferase [Thermococcus sibiricus MM 739] gi|242266140|gb|ACS90822.1| Probable tRNA/rRNA methyltransferase [Thermococcus sibiricus MM 739] Length = 393 Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust. Identities = 27/81 (33%), Positives = 42/81 (51%), Gaps = 9/81 (11%) Query: 100 RILDLGTGTGAVCL-ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 ++LD+ T TG + A + + K + VD S A+E AK NA N V + D L F Sbjct: 217 KVLDVFTYTGGFAIHAAVAGAE--KVIAVDKSPAAIEQAKENAKLNDVDGKMDFLVGSAF 274 Query: 159 SSVEGL------FDVIVSNPP 173 S +E + FD+++ +PP Sbjct: 275 SIMEKMQKKGEKFDIVILDPP 295 >gi|239998173|ref|ZP_04718097.1| ribosomal protein L11 methyltransferase [Neisseria gonorrhoeae 35/02] gi|240127432|ref|ZP_04740093.1| ribosomal protein L11 methyltransferase [Neisseria gonorrhoeae SK-93-1035] gi|268594025|ref|ZP_06128192.1| ribosomal protein L11 methyltransferase [Neisseria gonorrhoeae 35/02] gi|268547414|gb|EEZ42832.1| ribosomal protein L11 methyltransferase [Neisseria gonorrhoeae 35/02] Length = 295 Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust. Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 11/74 (14%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDW 157 +LD G G+G + +A LK VGVDI +A+ + NA N V +F D+L Sbjct: 167 VLDYGCGSGILTIAALKLGA-GSAVGVDIDEQAVRSGRDNAEQNNVDAQFFLPDSLP--- 222 Query: 158 FSSVEGLFDVIVSN 171 +G FDV+V+N Sbjct: 223 ----QGQFDVVVAN 232 >gi|227824077|ref|YP_002828050.1| methyltransferase small [Sinorhizobium fredii NGR234] gi|227343079|gb|ACP27297.1| methyltransferase small [Sinorhizobium fredii NGR234] Length = 338 Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust. Identities = 32/112 (28%), Positives = 47/112 (41%), Gaps = 4/112 (3%) Query: 70 DTFEPRPE--TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 D FE P + VD+ R+ K D G G G + + L + SP KG+ + Sbjct: 165 DVFEAAPGMFSHDRVDAGSELLASRLPKDFTGHAADFGAGWGYLSVMLAQASPGLKGIDL 224 Query: 128 -DISCKALEIAKSNAVTNGVSERFDTLQSDWFS-SVEGLFDVIVSNPPYIES 177 + +ALE A+ N N + D S +D+IV NPP+ E Sbjct: 225 FEADHEALEAARRNVKANAPTTPARFYWHDLTSEETRDKYDLIVMNPPFHEG 276 >gi|256851318|ref|ZP_05556707.1| ribosomal RNA small subunit methyltransferase B [Lactobacillus jensenii 27-2-CHN] gi|260660742|ref|ZP_05861657.1| ribosomal RNA small subunit methyltransferase B [Lactobacillus jensenii 115-3-CHN] gi|282933237|ref|ZP_06338624.1| ribosomal RNA small subunit methyltransferase B [Lactobacillus jensenii 208-1] gi|297206188|ref|ZP_06923583.1| ribosomal RNA small subunit methyltransferase B [Lactobacillus jensenii JV-V16] gi|256616380|gb|EEU21568.1| ribosomal RNA small subunit methyltransferase B [Lactobacillus jensenii 27-2-CHN] gi|260548464|gb|EEX24439.1| ribosomal RNA small subunit methyltransferase B [Lactobacillus jensenii 115-3-CHN] gi|281302741|gb|EFA94956.1| ribosomal RNA small subunit methyltransferase B [Lactobacillus jensenii 208-1] gi|297149314|gb|EFH29612.1| ribosomal RNA small subunit methyltransferase B [Lactobacillus jensenii JV-V16] Length = 437 Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust. Identities = 39/146 (26%), Positives = 59/146 (40%), Gaps = 21/146 (14%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LD G L + P K + +DI K L + K A V ER +TL D + Sbjct: 252 VLDTCAAPGGKTSQLAENLPQGKVISLDIHKKKLNLIKKYAERMHVDERVETLALDARKA 311 Query: 161 VEGL----FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV--- 213 E FD I+ + P C GL + P I D + + + I G+ Sbjct: 312 AEHFSDTKFDKILVDAP--------CSGLGLLRRKPEIRYDKTMKDVHNLARIQLGILNS 363 Query: 214 -SRHLNKDG-----LCSVEIGYNQKV 233 ++ L K+G CS+ I N++V Sbjct: 364 AAQLLKKNGELVYSTCSITIEENEQV 389 >gi|119509928|ref|ZP_01629070.1| hypothetical protein N9414_05594 [Nodularia spumigena CCY9414] gi|119465394|gb|EAW46289.1| hypothetical protein N9414_05594 [Nodularia spumigena CCY9414] Length = 238 Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust. Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 8/80 (10%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD--- 156 RIL+LG GTG + L + + P + + +D S + L+ A + G +++ +Q+D Sbjct: 44 RILELGCGTGELTLKIFQRFPDVEIIALDYSPRMLQCAGKKIKSAGYQQKWTGIQADFGE 103 Query: 157 WFSSVEGL-----FDVIVSN 171 W + E FD VS+ Sbjct: 104 WADNPEKFDIGSEFDACVSS 123 >gi|312867278|ref|ZP_07727488.1| methyltransferase small domain protein [Streptococcus parasanguinis F0405] gi|311097407|gb|EFQ55641.1| methyltransferase small domain protein [Streptococcus parasanguinis F0405] Length = 248 Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust. Identities = 27/99 (27%), Positives = 49/99 (49%), Gaps = 7/99 (7%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 VDS L P++ KR + I+DL G GAV L + + +GV+I + ++A + Sbjct: 33 VDSVLLSRFPKLPKRGL--IVDLCAGNGAVGLFASTRTE-AQIIGVEIQERLADMATRSI 89 Query: 142 VTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPYIE 176 N ++++ + D + + D+I+ NPPY + Sbjct: 90 ALNDLNQQMSMITDDLKHLPQHIGGSKVDIILCNPPYFK 128 >gi|229553103|ref|ZP_04441828.1| possible site-specific DNA-methyltransferase (adenine-specific) [Lactobacillus rhamnosus LMS2-1] gi|258540282|ref|YP_003174781.1| type I restriction-modification system, M subunit [Lactobacillus rhamnosus Lc 705] gi|229313600|gb|EEN79573.1| possible site-specific DNA-methyltransferase (adenine-specific) [Lactobacillus rhamnosus LMS2-1] gi|257151958|emb|CAR90930.1| Type I restriction-modification system, M subunit [Lactobacillus rhamnosus Lc 705] Length = 549 Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust. Identities = 39/148 (26%), Positives = 66/148 (44%), Gaps = 23/148 (15%) Query: 96 RDVVRILDLGTGTGAVCLALLKESPF-FKGV---GVDISCKALEIAKSNAV------TNG 145 +++ + D G+G++ L + E P K V G +++ +A+ N + TN Sbjct: 228 QEIFTVYDPTMGSGSLLLTVRDELPATVKAVMFHGQELNTTTFNLARMNLMMHNVPYTNM 287 Query: 146 VSERFDTLQSDWFSSVEG------LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199 DTL+ DW V G FD +V+NPPY S+ D +++ DPR G Sbjct: 288 SLRNADTLEDDWPDGVVGGVDSPRSFDAVVANPPY--SIHWDNSENKLK--DPRFKPFGA 343 Query: 200 IDGLSH--YRTIADGVSRHLNKDGLCSV 225 + S + + G+ HLN G ++ Sbjct: 344 LAPKSKADFAFVEHGL-YHLNDTGTMAI 370 >gi|158289899|ref|XP_001689406.1| AGAP010425-PA [Anopheles gambiae str. PEST] gi|157018380|gb|EDO64279.1| AGAP010425-PA [Anopheles gambiae str. PEST] Length = 468 Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust. Identities = 36/145 (24%), Positives = 66/145 (45%), Gaps = 27/145 (18%) Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPY------- 174 K + +DI + +E+AK NA GV++R + + D+ V+ L DV+ +PP+ Sbjct: 333 KVIAIDIDPRKIEMAKHNAAVYGVADRIEFIVGDFMQLVDRLQADVVFLSPPWGGPGYLK 392 Query: 175 -----IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY 229 +E ++ ++ + R+S + IA + R+ N L + G Sbjct: 393 DEVYNLEQSLLPVPATQLMEAAQRVS-----------KNIALYLPRNSNTQQLTML-AGP 440 Query: 230 NQKVDVVRIFESRKLFLVNAFKDYG 254 N V++ + F RKL + A+ YG Sbjct: 441 NGAVEIEQNFLDRKLIALTAY--YG 463 >gi|145238274|ref|XP_001391784.1| S-adenosylmethionine-dependent methyltransferase [Aspergillus niger CBS 513.88] gi|134076267|emb|CAK39552.1| unnamed protein product [Aspergillus niger] Length = 348 Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust. Identities = 21/44 (47%), Positives = 32/44 (72%), Gaps = 3/44 (6%) Query: 97 DVVRILDLGTGTGAVCLALLKESPFFKG--VGVDISCKALEIAK 138 D ILDLGTG G++ LALL++ +KG VG+D S +++E+A+ Sbjct: 125 DQPSILDLGTGNGSM-LALLRKRGGYKGAMVGIDYSIRSVELAR 167 >gi|126661911|ref|ZP_01732910.1| putative RNA methyltransferase [Flavobacteria bacterium BAL38] gi|126625290|gb|EAZ95979.1| putative RNA methyltransferase [Flavobacteria bacterium BAL38] Length = 470 Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust. Identities = 24/79 (30%), Positives = 42/79 (53%), Gaps = 8/79 (10%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE------RFDTLQ 154 + DL TGTG + + K++ K +GV+ +A+ AK+NA N ++ + Sbjct: 327 VYDLYTGTGTIAQFVSKQAK--KVIGVEAVPEAIIDAKANATRNNITNCEFYVGDMKNVF 384 Query: 155 SDWFSSVEGLFDVIVSNPP 173 +D F + G DVI+++PP Sbjct: 385 NDEFINQHGQPDVIITDPP 403 >gi|150397317|ref|YP_001327784.1| type 11 methyltransferase [Sinorhizobium medicae WSM419] gi|150028832|gb|ABR60949.1| Methyltransferase type 11 [Sinorhizobium medicae WSM419] Length = 340 Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust. Identities = 20/48 (41%), Positives = 30/48 (62%), Gaps = 2/48 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148 +LDLGTGTG + L E + +G+GVD S L +A+SN G+++ Sbjct: 160 LLDLGTGTGRILQ--LFEGIYRRGIGVDASRDMLAVARSNLDRAGITK 205 >gi|125984764|ref|XP_001356146.1| GA21936 [Drosophila pseudoobscura pseudoobscura] gi|195161922|ref|XP_002021805.1| GL26704 [Drosophila persimilis] gi|54644465|gb|EAL33206.1| GA21936 [Drosophila pseudoobscura pseudoobscura] gi|194103605|gb|EDW25648.1| GL26704 [Drosophila persimilis] Length = 216 Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust. Identities = 20/46 (43%), Positives = 28/46 (60%), Gaps = 1/46 (2%) Query: 96 RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 + R+LDLG G G +AL E + + GVD S KA+E+A+S A Sbjct: 58 KQTARVLDLGCGNGMFLVALANEG-YAQLTGVDYSPKAIELARSIA 102 >gi|302023422|ref|ZP_07248633.1| RNA methylase family protein [Streptococcus suis 05HAS68] Length = 327 Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust. Identities = 25/64 (39%), Positives = 33/64 (51%), Gaps = 13/64 (20%) Query: 125 VGVDISCKALEIAKSNAVTNGVSE-------RFDTLQSDWFSSVEGLFDVIVSNPPYIES 177 G DI + +EIAK NA GV + R L+SD + G VI+SNPPY E Sbjct: 199 AGSDIDARMIEIAKKNAFAAGVEQDIVFKQMRVQDLRSD---KING---VIISNPPYGER 252 Query: 178 VIVD 181 ++ D Sbjct: 253 LLDD 256 >gi|294782904|ref|ZP_06748230.1| N-6 adenine-specific DNA methylase [Fusobacterium sp. 1_1_41FAA] gi|294481545|gb|EFG29320.1| N-6 adenine-specific DNA methylase [Fusobacterium sp. 1_1_41FAA] Length = 243 Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust. Identities = 25/83 (30%), Positives = 46/83 (55%), Gaps = 5/83 (6%) Query: 96 RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER----FD 151 ++ +ILD+GTG + L L K + K GV+I + ++A N N ++E+ +D Sbjct: 42 KNTKKILDIGTGNAVIPLFLSKRTSA-KIYGVEIQEISYQLALRNININNLNEQIYIIYD 100 Query: 152 TLQSDWFSSVEGLFDVIVSNPPY 174 +++ G FD+++SNPP+ Sbjct: 101 NIKNYLKYFTIGSFDIVLSNPPF 123 >gi|254492950|ref|ZP_05106121.1| ribosomal protein L11 methyltransferase [Neisseria gonorrhoeae 1291] gi|226511990|gb|EEH61335.1| ribosomal protein L11 methyltransferase [Neisseria gonorrhoeae 1291] Length = 295 Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust. Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 11/74 (14%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDW 157 +LD G G+G + +A LK VGVDI +A+ + NA N V +F D+L Sbjct: 167 VLDYGCGSGILTIAALKLGA-GSAVGVDIDEQAVRSGRDNAEQNNVDAQFFLPDSLP--- 222 Query: 158 FSSVEGLFDVIVSN 171 +G FDV+V+N Sbjct: 223 ----QGQFDVVVAN 232 >gi|221308128|ref|ZP_03589975.1| hypothetical protein Bsubs1_01768 [Bacillus subtilis subsp. subtilis str. 168] gi|221312452|ref|ZP_03594257.1| hypothetical protein BsubsN3_01781 [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221317386|ref|ZP_03598680.1| hypothetical protein BsubsJ_01763 [Bacillus subtilis subsp. subtilis str. JH642] gi|221321649|ref|ZP_03602943.1| hypothetical protein BsubsS_01794 [Bacillus subtilis subsp. subtilis str. SMY] gi|255767092|ref|NP_388198.2| methyltransferase [Bacillus subtilis subsp. subtilis str. 168] gi|229485214|sp|O31474|YCGJ_BACSU RecName: Full=Uncharacterized methyltransferase ycgJ gi|225184719|emb|CAB12110.2| putative methyltransferase [Bacillus subtilis subsp. subtilis str. 168] Length = 253 Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust. Identities = 27/86 (31%), Positives = 41/86 (47%), Gaps = 5/86 (5%) Query: 86 LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG-VGVDISCKALEIAKSNAVTN 144 L + E R R+LD+G G G LA SP+ + +GVD + + +E+A S A Sbjct: 26 LGLMIKTAECRAEHRVLDIGAGAGHTALAF---SPYVQECIGVDATKEMVEVASSFAQEK 82 Query: 145 GVSE-RFDTLQSDWFSSVEGLFDVIV 169 GV RF ++ + FD+I Sbjct: 83 GVENVRFQQGTAESLPFPDDSFDIIT 108 >gi|195023706|ref|XP_001985735.1| GH20919 [Drosophila grimshawi] gi|193901735|gb|EDW00602.1| GH20919 [Drosophila grimshawi] Length = 218 Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust. Identities = 20/46 (43%), Positives = 27/46 (58%), Gaps = 1/46 (2%) Query: 96 RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 + R+LDLG G G +AL E F + GVD S KA+E+A+ A Sbjct: 57 KQSARVLDLGCGNGMFLIALANEG-FIQLTGVDYSPKAIELARGIA 101 >gi|167752427|ref|ZP_02424554.1| hypothetical protein ALIPUT_00671 [Alistipes putredinis DSM 17216] gi|167660668|gb|EDS04798.1| hypothetical protein ALIPUT_00671 [Alistipes putredinis DSM 17216] Length = 238 Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust. Identities = 20/50 (40%), Positives = 29/50 (58%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 RILD+ TGTG + LA+ + + +GVD+S L A+ A G+ ER Sbjct: 55 RILDVATGTGDLALAMARRMRGVQVLGVDLSENMLAEARRKATACGLDER 104 >gi|325579239|ref|ZP_08149195.1| ribosomal protein L11 methyltransferase [Haemophilus parainfluenzae ATCC 33392] gi|325159474|gb|EGC71608.1| ribosomal protein L11 methyltransferase [Haemophilus parainfluenzae ATCC 33392] Length = 295 Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust. Identities = 23/71 (32%), Positives = 40/71 (56%), Gaps = 2/71 (2%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 ++D G G+G + +A LK +G+DI +A+ +++NA NGV++R SD Sbjct: 162 VIDFGCGSGILAIAALKLGAK-NAIGIDIDPQAILASRNNAEQNGVADRLQLFLSD-DKP 219 Query: 161 VEGLFDVIVSN 171 + DV+V+N Sbjct: 220 ADLKADVVVAN 230 >gi|312135346|ref|YP_004002684.1| 50S ribosomal protein L11 methyltransferase [Caldicellulosiruptor owensensis OL] gi|311775397|gb|ADQ04884.1| ribosomal protein L11 methyltransferase [Caldicellulosiruptor owensensis OL] Length = 306 Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust. Identities = 27/90 (30%), Positives = 50/90 (55%), Gaps = 5/90 (5%) Query: 84 SALAFSLPRIEK--RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 + A L I+K + + +LD+GTG+G + +A K+ + + VDI A+++A NA Sbjct: 153 ESTALCLEAIQKYVKPGMDVLDVGTGSGILAIA-AKKLLASRVLAVDIDEVAVKVAMENA 211 Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSN 171 NGV + +++ +E FD++V+N Sbjct: 212 KLNGV--EIEIKKNNLVEGIEEKFDIVVAN 239 >gi|295099358|emb|CBK88447.1| 16S RNA G1207 methylase RsmC [Eubacterium cylindroides T2-87] Length = 196 Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust. Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 9/75 (12%) Query: 101 ILDLGTGTGAVCLALLKESPFFKG--VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 +LDLG G G + + L S F+K +DI+ +A E+AK N + + TL++D Sbjct: 62 VLDLGCGIGVIGIVL---SSFWKTNMTMIDINARACELAKKNLERHSIQA---TLKND-D 114 Query: 159 SSVEGLFDVIVSNPP 173 EG F+ I+ NPP Sbjct: 115 GIKEGNFECILLNPP 129 >gi|261837872|gb|ACX97638.1| type I restriction enzyme M protein [Helicobacter pylori 51] Length = 543 Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust. Identities = 28/90 (31%), Positives = 44/90 (48%), Gaps = 9/90 (10%) Query: 94 EKRDVVRILDLGTGTGAVCLALLKE--SPFFKGVGVDISCKALEIAKSNAVTNGVSERF- 150 E V+I D GTG + +AL + + DIS K+L++ K N + N ++ Sbjct: 226 EPTQNVKIYDPSAGTGTLLMALAHQIGTDSCTLYAQDISQKSLKMLKLNLILNDLTHSLK 285 Query: 151 -----DTLQSDWFS-SVEGLFDVIVSNPPY 174 +TL + + S +G D IVSNPP+ Sbjct: 286 YAIEGNTLTNPYHSKECKGEMDYIVSNPPF 315 >gi|164424513|ref|XP_960268.2| hypothetical protein NCU07107 [Neurospora crassa OR74A] gi|157070546|gb|EAA31032.2| conserved hypothetical protein [Neurospora crassa OR74A] Length = 326 Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust. Identities = 26/68 (38%), Positives = 33/68 (48%), Gaps = 6/68 (8%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 ILD+GTGTG + + E P +G DIS A N VS + D Q DW + Sbjct: 88 ILDIGTGTGNWAIDIATEFPSASVIGTDISAVQPTFAPPN-----VSFQIDDAQLDW-TF 141 Query: 161 VEGLFDVI 168 G FD+I Sbjct: 142 EPGHFDLI 149 >gi|153812010|ref|ZP_01964678.1| hypothetical protein RUMOBE_02403 [Ruminococcus obeum ATCC 29174] gi|149831909|gb|EDM86995.1| hypothetical protein RUMOBE_02403 [Ruminococcus obeum ATCC 29174] Length = 250 Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust. Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 4/84 (4%) Query: 96 RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155 R ++LD+GTGTG + L + G++I + ++A+ + N + D + Sbjct: 48 RQNEKVLDMGTGTGIIPFLLKAKDKGSHLTGLEIQEECADMARRSVSYNHLEADIDIVCG 107 Query: 156 DWFSSVE----GLFDVIVSNPPYI 175 D + E F + SNPPY+ Sbjct: 108 DIKEAAEIFGAASFHAVTSNPPYM 131 >gi|152998058|ref|YP_001342893.1| putative SAM-dependent methyltransferase [Marinomonas sp. MWYL1] gi|205829563|sp|A6W2M9|RLMF_MARMS RecName: Full=Ribosomal RNA large subunit methyltransferase F; AltName: Full=23S rRNA mA1618 methyltransferase; AltName: Full=rRNA adenine N-6-methyltransferase gi|150838982|gb|ABR72958.1| protein of unknown function DUF890 [Marinomonas sp. MWYL1] Length = 327 Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust. Identities = 33/111 (29%), Positives = 53/111 (47%), Gaps = 10/111 (9%) Query: 81 LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE----I 136 L D A +L I + V++LD+G G V + + ++ VG D++ A+ I Sbjct: 100 LADLLAASNLGVIPRGKGVKVLDVGVGANCVYPIIGHQEYGWQFVGSDVNPVAVATCDTI 159 Query: 137 AKSNAVTNG-VSERFDTLQSDWFSSV---EGLFDVIVSNPPY--IESVIVD 181 KSN G +S R T + F V + FD+ + NPP+ ES ++D Sbjct: 160 VKSNPCLKGAISARLQTQSAKLFDGVWKEKDRFDLTLCNPPFHTSESAMID 210 >gi|91774521|ref|YP_544277.1| putative SAM-dependent methyltransferase [Methylobacillus flagellatus KT] gi|123380658|sp|Q1H501|RLMF_METFK RecName: Full=Ribosomal RNA large subunit methyltransferase F; AltName: Full=23S rRNA mA1618 methyltransferase; AltName: Full=rRNA adenine N-6-methyltransferase gi|91708508|gb|ABE48436.1| 23S rRNA m(6)A-1618 methyltransferase [Methylobacillus flagellatus KT] Length = 336 Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust. Identities = 28/96 (29%), Positives = 43/96 (44%), Gaps = 8/96 (8%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE-----IAKSNAVTNGVSERFDTL 153 VR+LD+GTG V + ++ + VG DI+ +ALE +A + + + R Sbjct: 113 VRVLDIGTGANLVYPIIGQKEYGWHFVGTDINVEALENAQGIVAANPGLAGAIELRLQRN 172 Query: 154 QSDWFSSV---EGLFDVIVSNPPYIESVIVDCLGLE 186 FS V FD+ + NPP+ S G E Sbjct: 173 VGAVFSGVVQESERFDLTMCNPPFHASQAAAMAGTE 208 >gi|15790327|ref|NP_280151.1| hypothetical protein VNG1280C [Halobacterium sp. NRC-1] gi|169236060|ref|YP_001689260.1| hypothetical protein OE2833R [Halobacterium salinarum R1] gi|10580801|gb|AAG19631.1| conserved hypothetical protein [Halobacterium sp. NRC-1] gi|167727126|emb|CAP13912.1| conserved hypothetical protein [Halobacterium salinarum R1] Length = 200 Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust. Identities = 30/72 (41%), Positives = 40/72 (55%), Gaps = 4/72 (5%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFS 159 +LDLG GTGA+ L L ++ + VG DIS L A+ A T GV FDT + Sbjct: 46 VLDLGCGTGAIALGLAADA--GRVVGRDISDGMLTQAREKATTRGVDNVAFDTGRFRE-P 102 Query: 160 SVEGLFDVIVSN 171 + +G DV+VSN Sbjct: 103 NYDGDADVVVSN 114 >gi|332883049|gb|EGK03333.1| hypothetical protein HMPREF9456_01970 [Dysgonomonas mossii DSM 22836] Length = 236 Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust. Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 3/77 (3%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS---DW 157 ILD+GTGTG + L + + + +DI A+ AK N + R ++ + ++ Sbjct: 40 ILDVGTGTGLISLMMAQRNEKTIIDAIDIDSDAVSQAKDNIENSPFGNRINSWNASLQEF 99 Query: 158 FSSVEGLFDVIVSNPPY 174 S E ++VIVSNPP+ Sbjct: 100 SSKAEKRYNVIVSNPPF 116 >gi|318061095|ref|ZP_07979816.1| Methyltransferase type 12 [Streptomyces sp. SA3_actG] Length = 322 Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust. Identities = 21/57 (36%), Positives = 28/57 (49%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 I+DLG+GTGA ALL P VD S L+ + A G+ R T+ +D Sbjct: 95 HIVDLGSGTGAGTFALLARFPEAHVTAVDSSAPHLQRLREKACAAGLDGRVRTVHAD 151 >gi|225848651|ref|YP_002728814.1| SAM-dependent methyltransferase [Sulfurihydrogenibium azorense Az-Fu1] gi|225644243|gb|ACN99293.1| SAM-dependent methyltransferase [Sulfurihydrogenibium azorense Az-Fu1] Length = 254 Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust. Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 4/81 (4%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSD 156 +++DLGTG+G + + L + + G+++ ++A+ N N V D + Sbjct: 53 KLIDLGTGSGIILILLSLKYKNIQFYGLEVQQDLYQLAQKNIKLNNVKADLKLGDVKEVK 112 Query: 157 WFSSVEGLFDVIVSNPPYIES 177 F + FD +V NPPY +S Sbjct: 113 KFYEHQ-YFDYVVINPPYFKS 132 >gi|156838443|ref|XP_001642927.1| hypothetical protein Kpol_411p14 [Vanderwaltozyma polyspora DSM 70294] gi|156113507|gb|EDO15069.1| hypothetical protein Kpol_411p14 [Vanderwaltozyma polyspora DSM 70294] Length = 228 Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust. Identities = 44/182 (24%), Positives = 75/182 (41%), Gaps = 38/182 (20%) Query: 57 WRDFYNVRLTLSSDTFEPRPE-----------TELLVDSALAFSLPRIEKRDVVRILDLG 105 W DFY +L + F+ PE E+ + L ++ + I+DLG Sbjct: 18 WDDFY----SLERENFKENPEDVGECWFNDSDAEMRMVDFLNDNIGSYNIKSDSSIIDLG 73 Query: 106 TGTGAVCLALLKESPFFKGVGVDISCK----ALEIAKSNAVTNGVS-ERFDTLQSDWFSS 160 TG G + L + +GVD S + A EIAK+ + + E+ D Q++W Sbjct: 74 TGNGHLLFELFENDFDGSMLGVDYSEQSVNFATEIAKNKGYNDSIKFEQADIFQNNW--- 130 Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220 G FD++ ++ +D + L FD DG + + + + L+KD Sbjct: 131 NPGKFDIV------LDKGTLDAIALSGIKFD---------DGKTIVDIYSKVIEKLLDKD 175 Query: 221 GL 222 G+ Sbjct: 176 GV 177 >gi|138893974|ref|YP_001124427.1| RNA methyltransferase-like protein [Geobacillus thermodenitrificans NG80-2] gi|196250476|ref|ZP_03149167.1| RNA methyltransferase, TrmA family [Geobacillus sp. G11MC16] gi|134265487|gb|ABO65682.1| RNA methyltransferase-like protein [Geobacillus thermodenitrificans NG80-2] gi|196209966|gb|EDY04734.1| RNA methyltransferase, TrmA family [Geobacillus sp. G11MC16] Length = 460 Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust. Identities = 34/121 (28%), Positives = 61/121 (50%), Gaps = 17/121 (14%) Query: 62 NVRLTLSSDTF-EPRPE-TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119 +++ +S+ +F + PE T++L D AL ++ E ++D G G + L L K++ Sbjct: 277 DIQFAISARSFYQVNPEQTKVLYDKALEYA----ELTGTETVIDAYCGIGTISLFLAKKA 332 Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSE------RFDTLQSDWFSSVEGL-FDVIVSNP 172 GV+I +A+E AK NA NG++ + + W+ EG+ D +V +P Sbjct: 333 KHV--YGVEIVPEAIEDAKRNAALNGITNVTFAVGAAEDVIPRWYE--EGIRADCLVVDP 388 Query: 173 P 173 P Sbjct: 389 P 389 >gi|330900061|gb|EGH31480.1| N-methyl-transferase related protein [Pseudomonas syringae pv. japonica str. M301072PT] Length = 237 Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust. Identities = 27/80 (33%), Positives = 45/80 (56%), Gaps = 5/80 (6%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LDLG G+G + ++L + P V DIS ++ + N + R ++SD FS+ Sbjct: 83 VLDLGCGSGYIGISLYR--PGMDLVLADISKDSILSSTENLRRMEIPGR--VIESDLFSN 138 Query: 161 VEGL-FDVIVSNPPYIESVI 179 ++GL FD I+ NPP ++ I Sbjct: 139 LKGLRFDTILFNPPLLDKKI 158 >gi|331003128|ref|ZP_08326638.1| hypothetical protein HMPREF0491_01500 [Lachnospiraceae oral taxon 107 str. F0167] gi|330412959|gb|EGG92336.1| hypothetical protein HMPREF0491_01500 [Lachnospiraceae oral taxon 107 str. F0167] Length = 248 Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust. Identities = 21/80 (26%), Positives = 43/80 (53%), Gaps = 4/80 (5%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 I+DL TG+G V + L ++ + G++I ++A + + N + E+ D + D ++ Sbjct: 52 IIDLCTGSGIVPVLLSAKTSAKRITGIEIQKDIADMANRSVLYNSLEEKIDIINDDIANA 111 Query: 161 VEGL----FDVIVSNPPYIE 176 ++ + D I NPPY++ Sbjct: 112 LKYIKPCSVDTISVNPPYMK 131 >gi|313124290|ref|YP_004034549.1| 16S RNA methylase rsmc [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|312280853|gb|ADQ61572.1| 16S RNA methylase RsmC [Lactobacillus delbrueckii subsp. bulgaricus ND02] Length = 200 Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust. Identities = 38/143 (26%), Positives = 67/143 (46%), Gaps = 14/143 (9%) Query: 34 QRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRP---ETELLVDSALAFSL 90 +++F N V +H + + G N+ LT + F + +L++ L L Sbjct: 3 EQYFTENPTVDHDEHHVNYHLNG----INLNLTTDAGVFSKNRVDYGSGVLIEQMLDQEL 58 Query: 91 PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150 P ILD+G G G + L K+ P + VD++ +A+++A+ NA N + Sbjct: 59 PG------GNILDVGCGYGPIGLFAAKKWPGRQVDMVDVNERAMDLARRNAAAN-GAGNV 111 Query: 151 DTLQSDWFSSVEGLFDVIVSNPP 173 + SD + V G + +IV+NPP Sbjct: 112 NIFASDRYQEVSGQYAMIVTNPP 134 >gi|228478347|ref|ZP_04062955.1| type I restriction-modification system, M subunit [Streptococcus salivarius SK126] gi|228250026|gb|EEK09296.1| type I restriction-modification system, M subunit [Streptococcus salivarius SK126] Length = 534 Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust. Identities = 30/112 (26%), Positives = 54/112 (48%), Gaps = 13/112 (11%) Query: 72 FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV---GVD 128 + P+P +L+ + +AF L R +K+ + D G+G++ L + S + V G + Sbjct: 200 YTPQPVAKLM--TQIAF-LGREDKQGFT-LYDATMGSGSLLLNAKRYSRQPQTVVYFGQE 255 Query: 129 ISCKALEIAKSNAVTNGVS------ERFDTLQSDWFSSVEGLFDVIVSNPPY 174 ++ +A+ N + +GV DTL DW + FD ++ NPPY Sbjct: 256 LNTSTYNLARMNMILHGVPIENQFLHNADTLDEDWPTQEPTNFDGVLMNPPY 307 >gi|91789281|ref|YP_550233.1| methyltransferase small [Polaromonas sp. JS666] gi|91698506|gb|ABE45335.1| methyltransferase small [Polaromonas sp. JS666] Length = 417 Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust. Identities = 31/105 (29%), Positives = 50/105 (47%), Gaps = 4/105 (3%) Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 D+GTGTG + L S + V D +AL A+ N G + + +++ F Sbjct: 243 FDIGTGTGVLAAVLALRSGVQRVVATDQDPRALACARDNLKRLGFPQ-VEVREANLFP-- 299 Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206 EG +IV NPP++ + + V D D R+ L G + GL+ + Sbjct: 300 EGRAHIIVCNPPWLPARPGSPVEHAVYDEDSRMLL-GFLGGLAAH 343 >gi|75910532|ref|YP_324828.1| trans-aconitate 2-methyltransferase [Anabaena variabilis ATCC 29413] gi|75704257|gb|ABA23933.1| trans-aconitate 2-methyltransferase [Anabaena variabilis ATCC 29413] Length = 254 Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust. Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 4/79 (5%) Query: 93 IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152 ++ ++ +RILDLG GTG + L + +G+D S K L +A A G RF+ Sbjct: 28 VQPQENLRILDLGCGTGKLTQYLHDTLAAKETLGIDASEKMLSVASQFA---GNRLRFEQ 84 Query: 153 LQSDWFSSVEGLFDVIVSN 171 + + S EG FDV+ SN Sbjct: 85 GRIE-DSPGEGKFDVVFSN 102 >gi|157151457|ref|YP_001449876.1| type I restriction-modification system, M subunit [Streptococcus gordonii str. Challis substr. CH1] gi|157076251|gb|ABV10934.1| type I restriction-modification system, M subunit [Streptococcus gordonii str. Challis substr. CH1] Length = 535 Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust. Identities = 31/112 (27%), Positives = 52/112 (46%), Gaps = 13/112 (11%) Query: 72 FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV---GVD 128 + P+P +L+ + +AF L R E + D G+G++ L K S + V G + Sbjct: 201 YTPQPVAKLM--TQIAF-LGR-EDEQGFTLYDATMGSGSLLLNAKKYSHQPQTVQYFGQE 256 Query: 129 ISCKALEIAKSNAVTNGVS------ERFDTLQSDWFSSVEGLFDVIVSNPPY 174 ++ +A+ N + +GV DTL DW + FD ++ NPPY Sbjct: 257 LNTSTYNLARMNMILHGVPVENQFLHNADTLDEDWPTQEPTNFDGVLMNPPY 308 >gi|86358431|ref|YP_470323.1| ribosomal protein L11 methyltransferase [Rhizobium etli CFN 42] gi|123511392|sp|Q2K6E0|PRMA_RHIEC RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11 Mtase gi|86282533|gb|ABC91596.1| ribosomal protein L11 methyltransferase protein [Rhizobium etli CFN 42] Length = 292 Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust. Identities = 26/76 (34%), Positives = 37/76 (48%), Gaps = 9/76 (11%) Query: 102 LDLGTGTGAVCLAL--LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 LDLGTG+G + +A+ LK P DI A +A N NG++ T + F Sbjct: 156 LDLGTGSGVLAIAVRKLKNMPVL---ATDIDPIATRVAAENVRRNGIASGIVTRTAPGFH 212 Query: 160 SV----EGLFDVIVSN 171 S G FD+I++N Sbjct: 213 STAFSEHGPFDLIIAN 228 >gi|307308264|ref|ZP_07587973.1| transcriptional regulator, ArsR family [Sinorhizobium meliloti BL225C] gi|307319731|ref|ZP_07599156.1| transcriptional regulator, ArsR family [Sinorhizobium meliloti AK83] gi|306894662|gb|EFN25423.1| transcriptional regulator, ArsR family [Sinorhizobium meliloti AK83] gi|306901262|gb|EFN31868.1| transcriptional regulator, ArsR family [Sinorhizobium meliloti BL225C] Length = 340 Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust. Identities = 20/48 (41%), Positives = 30/48 (62%), Gaps = 2/48 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148 +LDLGTGTG + L E + +G+GVD S L +A+SN G+++ Sbjct: 160 LLDLGTGTGRILQ--LFEGIYRRGIGVDASRDMLAVARSNLDRAGITK 205 >gi|265753522|ref|ZP_06088877.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Bacteroides sp. 3_1_33FAA] gi|263235236|gb|EEZ20760.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Bacteroides sp. 3_1_33FAA] Length = 473 Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust. Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 10/80 (12%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF-------DTL 153 + DL TGTG + + +++ K +G++ +A+E AK N+ NG+ D L Sbjct: 329 VYDLYTGTGTIANFVSRQAK--KVIGIEYVPEAIEDAKVNSAINGIDNTLFYAGDMKDIL 386 Query: 154 QSDWFSSVEGLFDVIVSNPP 173 + F S G DVI+++PP Sbjct: 387 TQE-FISQHGRPDVIITDPP 405 >gi|257068719|ref|YP_003154974.1| putative N6-adenine-specific DNA methylase [Brachybacterium faecium DSM 4810] gi|256559537|gb|ACU85384.1| predicted N6-adenine-specific DNA methylase [Brachybacterium faecium DSM 4810] Length = 339 Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust. Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 1/75 (1%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LDL G+G + L + + VGVD+ A++ A+++ R D L D ++ Sbjct: 190 LLDLTCGSGTFLVEQLHAAVPARAVGVDLDPAAIDAARAHQRAARRKGRIDWLTGDVLTA 249 Query: 161 -VEGLFDVIVSNPPY 174 +EG F +V+NPP+ Sbjct: 250 DLEGGFTKMVTNPPW 264 >gi|312132380|ref|YP_003999719.1| protein [Bifidobacterium longum subsp. longum BBMN68] gi|291516180|emb|CBK69796.1| Methyltransferase domain [Bifidobacterium longum subsp. longum F8] gi|311772531|gb|ADQ02019.1| Hypothetical protein BBMN68_105 [Bifidobacterium longum subsp. longum BBMN68] Length = 135 Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust. Identities = 31/91 (34%), Positives = 40/91 (43%), Gaps = 14/91 (15%) Query: 86 LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV--- 142 LA LP + V R+LD+G G G L + P K +GVD S +E A+ Sbjct: 23 LAMQLP-PDDGSVTRVLDIGCGPGNSTAVLRERYPHAKILGVDSSPVMIETARKTYPDID 81 Query: 143 --TNGVSERFDTLQSDWFSSVEGLFDVIVSN 171 VS R D L +D FDV+ SN Sbjct: 82 FQLCDVSARLDELPAD--------FDVVFSN 104 >gi|16127725|ref|NP_422289.1| UbiE/COQ5 family methlytransferase [Caulobacter crescentus CB15] gi|13425221|gb|AAK25457.1| methlytransferase, UbiE/COQ5 family [Caulobacter crescentus CB15] Length = 276 Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust. Identities = 30/81 (37%), Positives = 42/81 (51%), Gaps = 3/81 (3%) Query: 92 RIEKRDVVRILDLGTGTGAVCL-ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150 R + R +LD+G G+GA A + P + VG DIS LE+A+ A G+ E Sbjct: 40 RADLRAGEAVLDVGCGSGATTFEAAWRVGPQGRAVGADISGALLELARRRAGEQGL-EGV 98 Query: 151 DTLQSDWFSSVEGL-FDVIVS 170 D +Q+D + G FD IVS Sbjct: 99 DFVQADAQTHDFGAGFDAIVS 119 >gi|319654336|ref|ZP_08008424.1| YefA protein [Bacillus sp. 2_A_57_CT2] gi|317394036|gb|EFV74786.1| YefA protein [Bacillus sp. 2_A_57_CT2] Length = 460 Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust. Identities = 32/120 (26%), Positives = 63/120 (52%), Gaps = 15/120 (12%) Query: 62 NVRLTLSSDTF-EPRPE-TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119 +++ +S+ +F + PE T++L D AL ++ E++ ++D G G + L L +++ Sbjct: 277 DIKFAISARSFYQVNPEQTKVLYDKALEYANLSGEEQ----VIDAYCGIGTISLFLAQKA 332 Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSE------RFDTLQSDWFSSVEGLFDVIVSNPP 173 GV+I +A+E AK NA NG++ + + + DW+ +V+V +PP Sbjct: 333 KEV--FGVEIVPEAIEDAKRNADLNGMTNASFAVGKAEEVIPDWYKK-GNTAEVLVVDPP 389 >gi|313888247|ref|ZP_07821918.1| methyltransferase small domain protein [Peptoniphilus harei ACS-146-V-Sch2b] gi|312845650|gb|EFR33040.1| methyltransferase small domain protein [Peptoniphilus harei ACS-146-V-Sch2b] Length = 131 Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust. Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 6/79 (7%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R LDLG G G + L + + + VDI+ LE + + + N + ++ ++ D F+ Sbjct: 38 RALDLGCGNGILSLRIADR--YEEIHSVDINKIVLENFRESLIVNRLEDKIKIIEKDVFA 95 Query: 160 SVE----GLFDVIVSNPPY 174 E FD IV NPPY Sbjct: 96 LKEVYETNYFDSIVFNPPY 114 >gi|269103445|ref|ZP_06156142.1| predicted O-methyltransferase [Photobacterium damselae subsp. damselae CIP 102761] gi|268163343|gb|EEZ41839.1| predicted O-methyltransferase [Photobacterium damselae subsp. damselae CIP 102761] Length = 237 Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust. Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 4/78 (5%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD---W 157 ILD+GTG+G + L + + +++ A +AK N + S R ++++ W Sbjct: 40 ILDIGTGSGLLALMAAQRTGDASITAIELDPTAALVAKDNFGHSPWSARLSCIEANLIHW 99 Query: 158 FSSV-EGLFDVIVSNPPY 174 F ++ + F IV NPPY Sbjct: 100 FPTISKQTFGSIVCNPPY 117 >gi|212693125|ref|ZP_03301253.1| hypothetical protein BACDOR_02632 [Bacteroides dorei DSM 17855] gi|212664230|gb|EEB24802.1| hypothetical protein BACDOR_02632 [Bacteroides dorei DSM 17855] Length = 473 Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust. Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 10/80 (12%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF-------DTL 153 + DL TGTG + + +++ K +G++ +A+E AK N+ NG+ D L Sbjct: 329 VYDLYTGTGTIANFVSRQAK--KVIGIEYVPEAIEDAKVNSAINGIDNTLFYAGDMKDIL 386 Query: 154 QSDWFSSVEGLFDVIVSNPP 173 + F S G DVI+++PP Sbjct: 387 TQE-FISQHGRPDVIITDPP 405 >gi|59800510|ref|YP_207222.1| ribosomal protein L11 methyltransferase [Neisseria gonorrhoeae FA 1090] gi|81311265|sp|Q5FAH7|PRMA_NEIG1 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11 Mtase gi|59717405|gb|AAW88810.1| putative ribosomal protein L11 methyltransferase [Neisseria gonorrhoeae FA 1090] Length = 295 Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust. Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 11/74 (14%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDW 157 +LD G G+G + +A LK VGVDI +A+ + NA N V +F D+L Sbjct: 167 VLDYGCGSGILTIAALKLGA-GSAVGVDIDEQAVRSGRDNAEQNNVDAQFFLPDSLP--- 222 Query: 158 FSSVEGLFDVIVSN 171 +G FDV+V+N Sbjct: 223 ----QGQFDVVVAN 232 >gi|330447453|ref|ZP_08311102.1| 16S rRNA m2G1207 methyltransferase [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328491644|dbj|GAA05599.1| 16S rRNA m2G1207 methyltransferase [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 340 Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust. Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 3/76 (3%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN-AVTNGVSERFDTLQSDWF 158 ++LD G G G + + + P DIS A+E AK V N + +F +D + Sbjct: 202 KVLDFGCGAGVIGAVMKAKYPAIDLELCDISALAIESAKETFKVNNLEASKFTA--TDVY 259 Query: 159 SSVEGLFDVIVSNPPY 174 ++ G + ++SNPP+ Sbjct: 260 KTLTGPYQFLISNPPF 275 >gi|148244517|ref|YP_001219211.1| hypothetical protein COSY_0362 [Candidatus Vesicomyosocius okutanii HA] gi|146326344|dbj|BAF61487.1| conserved hypothetical protein [Candidatus Vesicomyosocius okutanii HA] Length = 195 Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust. Identities = 38/118 (32%), Positives = 54/118 (45%), Gaps = 16/118 (13%) Query: 63 VRLTLSS--DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120 V LTL + F PR +D + ++ + + LDLG G G + LA+ K P Sbjct: 23 VNLTLKTRWGVFSPRS-----IDDGTKLFMKYLKIINDDKCLDLGCGYGPIGLAVAKSCP 77 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ---SDWFSSVEG--LFDVIVSNPP 173 + VD A+E++ NA N R D +Q SD F SV FD ++SN P Sbjct: 78 KTEVHMVDKDFIAVELSNINAKLN----RIDNIQVYLSDAFLSVNKTDYFDQVLSNVP 131 >gi|108798553|ref|YP_638750.1| methyltransferase type 11 [Mycobacterium sp. MCS] gi|108768972|gb|ABG07694.1| Methyltransferase type 11 [Mycobacterium sp. MCS] Length = 197 Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust. Identities = 20/63 (31%), Positives = 34/63 (53%) Query: 93 IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152 +E+R + L G GA +L + +GVD S +A+E+A++NA GV+ RF+ Sbjct: 21 LERRGAISGAVLDAGCGAGEHTILLTGLGYDVLGVDFSARAVELARANAAARGVNARFEV 80 Query: 153 LQS 155 + Sbjct: 81 ADA 83 >gi|57641442|ref|YP_183920.1| ribosomal RNA small subunit methyltransferase C [Thermococcus kodakarensis KOD1] gi|57159766|dbj|BAD85696.1| ribosomal RNA small subunit methyltransferase C [Thermococcus kodakarensis KOD1] Length = 195 Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust. Identities = 32/100 (32%), Positives = 50/100 (50%), Gaps = 18/100 (18%) Query: 78 TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137 TELL++S + + R+LDLG G G + + + + V D++ +A+ IA Sbjct: 45 TELLIESMVL--------QPGWRVLDLGCGYGPIGIVASRFVDYV--VMTDVNRRAVSIA 94 Query: 138 KSNAVTNGVSE---RFDTLQSDWFSSVEG-LFDVIVSNPP 173 K N NGV R+ +L + V G FD I++NPP Sbjct: 95 KKNLKINGVRNAEVRWGSL----YEPVAGEKFDSIITNPP 130 >gi|118580724|ref|YP_901974.1| RNA methyltransferase [Pelobacter propionicus DSM 2379] gi|118503434|gb|ABK99916.1| 23S rRNA m(5)U-1939 methyltransferase [Pelobacter propionicus DSM 2379] Length = 493 Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust. Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 17/83 (20%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS----------ERF 150 +LDL G G + L L + + + +GV++ A+E A+ NA NG+S E+ Sbjct: 342 VLDLYCGIGGIALTLARRA--RRVIGVEVVEAAVEDARRNARMNGISNCVFQAGDVAEQL 399 Query: 151 DTLQSDWFSSVEGLFDVIVSNPP 173 + L D EG+ DV+V NPP Sbjct: 400 EELAEDG----EGV-DVVVLNPP 417 >gi|268611482|ref|ZP_06145209.1| putative methyltransferase [Ruminococcus flavefaciens FD-1] Length = 186 Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust. Identities = 37/140 (26%), Positives = 61/140 (43%), Gaps = 14/140 (10%) Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 R ++ + + RP T+ + ++ + +IE DV LDL G+G + + + Sbjct: 11 RRLVAPEGMDVRPTTDKVKEAIFSAIQFQIEGADV---LDLFAGSGQMGIEAISRGAK-H 66 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQS----DWFSSVEGLFDVIVSNPPYIESVI 179 V +D S +AL N G ER+ + S D+ FD+I+ +PPY S I Sbjct: 67 AVFIDSSNRALRCVHENLRNTGF-ERYSEVISRDSYDYIKLTSQHFDIIILDPPYRHSHI 125 Query: 180 VDCLGLEVRDFDPRISLDGG 199 V+ L + DGG Sbjct: 126 VNILPFAAKKLK-----DGG 140 >gi|238619836|ref|YP_002914662.1| methylase [Sulfolobus islandicus M.16.4] gi|238380906|gb|ACR41994.1| methylase [Sulfolobus islandicus M.16.4] Length = 207 Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust. Identities = 41/155 (26%), Positives = 70/155 (45%), Gaps = 27/155 (17%) Query: 53 RILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG--A 110 RI+ +R F +L L+ T+EP +T++L++ L ++ K + ++LD+G+G+G Sbjct: 5 RIVEFRGF---KLCLNDQTYEPSDDTDILLN------LLKVGKGE--KVLDMGSGSGILG 53 Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIV 169 + ++ F + + L K N + N L D S + FDV + Sbjct: 54 IWSLIMGGKVIFVDINPYAATSTLCSLKVNNLYNS-PNYLGVLNCDLLSCLRKYDFDVAI 112 Query: 170 SNPPYIESVIVDCLGLEVRDFDPRI--SLDGGIDG 202 NPPY L V +++ I S GG DG Sbjct: 113 FNPPY----------LPVEEYNEWIGYSWSGGKDG 137 >gi|219871611|ref|YP_002475986.1| ribosomal protein L11 methyltransferase [Haemophilus parasuis SH0165] gi|254783305|sp|B8F6T6|PRMA_HAEPS RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11 Mtase gi|219691815|gb|ACL33038.1| ribosomal protein L11 methyltransferase [Haemophilus parasuis SH0165] Length = 294 Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust. Identities = 18/50 (36%), Positives = 32/50 (64%), Gaps = 1/50 (2%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150 ++D G G+G + +A LK K +G+DI +A+ +++NA NGV++R Sbjct: 162 VIDFGCGSGILAIAALKLGAK-KAIGIDIDPQAILASQNNAEVNGVADRL 210 >gi|218261867|ref|ZP_03476552.1| hypothetical protein PRABACTJOHN_02223 [Parabacteroides johnsonii DSM 18315] gi|218223715|gb|EEC96365.1| hypothetical protein PRABACTJOHN_02223 [Parabacteroides johnsonii DSM 18315] Length = 191 Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust. Identities = 32/81 (39%), Positives = 42/81 (51%), Gaps = 5/81 (6%) Query: 90 LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 L R R +RILD+G GTG + LL SP + VGVD+S +E A+S T V R Sbjct: 30 LQRTGLRKGLRILDIGCGTGVLESYLLPYSP-RQIVGVDLSPAMIEKARSKYATPVVDFR 88 Query: 150 FDTLQSDWFSSVEGLFDVIVS 170 Q+ W E FD I++ Sbjct: 89 ---CQNVWDIQGES-FDYIIA 105 >gi|124027170|ref|YP_001012490.1| methylase [Hyperthermus butylicus DSM 5456] gi|123977864|gb|ABM80145.1| Methylase [Hyperthermus butylicus DSM 5456] Length = 192 Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust. Identities = 18/59 (30%), Positives = 35/59 (59%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 + DLG+G G V + ++ K VGV+I +E++K+ A GV++R + ++ +F+ Sbjct: 30 VYDLGSGDGRVVVIAARDFCVEKAVGVEIDPALVEVSKAKARMEGVADRVEIIEDSFFN 88 >gi|94991200|ref|YP_599300.1| Type I restriction-modification system methylation subunit [Streptococcus pyogenes MGAS10270] gi|94544708|gb|ABF34756.1| Type I restriction-modification system methylation subunit [Streptococcus pyogenes MGAS10270] Length = 526 Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust. Identities = 24/90 (26%), Positives = 42/90 (46%), Gaps = 9/90 (10%) Query: 94 EKRDVVRILDLGTGTGAVCLALLK---ESPFFKGVGVDISCKALEIAKSNAVTNGVS--- 147 E + + + D G+G++ L K +S G +I+ +A+ N + +GV+ Sbjct: 215 EDQKGMTLYDPAMGSGSLLLNAKKYSNQSDTVSYYGQEINTSTYNLARMNMMLHGVAIEN 274 Query: 148 ---ERFDTLQSDWFSSVEGLFDVIVSNPPY 174 DTL +DW + FD ++ NPPY Sbjct: 275 QHLSNADTLDADWPTDEPTNFDGVLMNPPY 304 >gi|78188211|ref|YP_378549.1| Mg-protoporphyrin IX methyl transferase [Chlorobium chlorochromatii CaD3] gi|78170410|gb|ABB27506.1| Magnesium protoporphyrin O-methyltransferase [Chlorobium chlorochromatii CaD3] Length = 232 Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust. Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 4/95 (4%) Query: 75 RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134 R +++D A + L ++ +LD G GTG + L K +K VDI+ + + Sbjct: 44 RQGHAVMMDKAFDW-LEKLRLPKGATVLDAGCGTGLFSIRLAKAG--YKVKSVDIASQMV 100 Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIV 169 E A++ A GV+ D + + +V G +D +V Sbjct: 101 EKARAEATKQGVAGNMD-FEVNTIEAVSGTYDAVV 134 >gi|17989383|ref|NP_542016.1| methyltransferase [Brucella melitensis bv. 1 str. 16M] gi|17985256|gb|AAL54280.1| methyltransferase [Brucella melitensis bv. 1 str. 16M] Length = 221 Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust. Identities = 40/135 (29%), Positives = 62/135 (45%), Gaps = 14/135 (10%) Query: 48 HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDS---ALAFSLPRIEKRDVVRILDL 104 E+ RI+G + + R ++ T RP T+ +S LA S P +K + VR+LDL Sbjct: 31 REAAVRIVGGK--FRGRALVTPSTNAIRPTTDRTRESLFNILAHSFP--DKVEGVRVLDL 86 Query: 105 GTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-----RFDTLQSDWFS 159 GTGA+ L L + V+ S I + N G+ R D Q Sbjct: 87 FAGTGALGLEALSRGARYATF-VEESADGRGILRQNIEALGLQGHTKILRRDACQLGIVG 145 Query: 160 SVEGLFDVIVSNPPY 174 ++E FD++ ++PPY Sbjct: 146 TME-PFDLVFADPPY 159 >gi|330881583|gb|EGH15732.1| ribosomal RNA small subunit methyltransferase C [Pseudomonas syringae pv. glycinea str. race 4] Length = 296 Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust. Identities = 26/105 (24%), Positives = 44/105 (41%), Gaps = 2/105 (1%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 +D A L I+K +LD G G G + A+ + P + +D+ A ++ Sbjct: 140 LDRGSALLLENIDKLPSGNLLDFGCGAGVLGAAVKRRYPHNDVIMLDVDAFATASSRLTL 199 Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLE 186 NG+ + L D + + I+SNPP+ V D + E Sbjct: 200 AANGLQAQ--VLTGDGIDAAPMGLNTILSNPPFHVGVHTDYMATE 242 >gi|325297416|ref|YP_004257333.1| RNA methyltransferase, TrmA family [Bacteroides salanitronis DSM 18170] gi|324316969|gb|ADY34860.1| RNA methyltransferase, TrmA family [Bacteroides salanitronis DSM 18170] Length = 474 Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust. Identities = 32/115 (27%), Positives = 56/115 (48%), Gaps = 17/115 (14%) Query: 72 FEPRPETELLVDSALAFSLPRIEKRDVV------RILDLGTGTGAVCLALLKESPFFKGV 125 F+ P++ +S A++L ++ RD + DL TGTG + + +++ K + Sbjct: 295 FKVGPKSFYQTNSEQAYNLYKV-ARDFAGLTGNELVYDLYTGTGTIANFVSRQAK--KVI 351 Query: 126 GVDISCKALEIAKSNAVTNGVSERF-------DTLQSDWFSSVEGLFDVIVSNPP 173 G++ +A+E AK N+ NG+ D L D F G DVI+++PP Sbjct: 352 GIEYVPEAIEDAKVNSELNGIKNTLFYAGDMKDILTED-FIRTHGRPDVIITDPP 405 >gi|219666402|ref|YP_002456837.1| methyltransferase type 11 [Desulfitobacterium hafniense DCB-2] gi|219536662|gb|ACL18401.1| Methyltransferase type 11 [Desulfitobacterium hafniense DCB-2] Length = 257 Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust. Identities = 25/70 (35%), Positives = 35/70 (50%), Gaps = 2/70 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LD+GTG G ALL S + G+D S K +E A +NA G+ F + S Sbjct: 50 KVLDVGTGPG--FFALLMGSMGWDVHGIDCSEKMIETAVANAQKAGIDAEFSVMDSHSLD 107 Query: 160 SVEGLFDVIV 169 + FD IV Sbjct: 108 FPDNTFDYIV 117 >gi|167854908|ref|ZP_02477684.1| ribosomal protein L11 methyltransferase [Haemophilus parasuis 29755] gi|167853975|gb|EDS25213.1| ribosomal protein L11 methyltransferase [Haemophilus parasuis 29755] Length = 294 Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust. Identities = 18/50 (36%), Positives = 32/50 (64%), Gaps = 1/50 (2%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150 ++D G G+G + +A LK K +G+DI +A+ +++NA NGV++R Sbjct: 162 VIDFGCGSGILAIAALKLGAK-KAIGIDIDPQAILASQNNAEVNGVADRL 210 >gi|90424781|ref|YP_533151.1| ribosomal L11 methyltransferase [Rhodopseudomonas palustris BisB18] gi|90106795|gb|ABD88832.1| LSU ribosomal protein L11P methyltransferase [Rhodopseudomonas palustris BisB18] Length = 296 Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust. Identities = 24/83 (28%), Positives = 44/83 (53%), Gaps = 5/83 (6%) Query: 93 IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152 +++R +LDLGTGTG + +A K + + DI ++ +A+ NA NGV D Sbjct: 150 LKRRSPRNVLDLGTGTGVLAIAAAK-ALQQRVTASDIDPVSVRVARDNARLNGVGHLLDG 208 Query: 153 LQSDWFSSVE----GLFDVIVSN 171 + + F+ + FD++++N Sbjct: 209 ICAAGFADAQFRQAAPFDLVLAN 231 >gi|262401679|ref|ZP_06078245.1| 16S RNA G1207 methylase RsmC [Vibrio sp. RC586] gi|262352096|gb|EEZ01226.1| 16S RNA G1207 methylase RsmC [Vibrio sp. RC586] Length = 340 Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust. Identities = 25/86 (29%), Positives = 40/86 (46%), Gaps = 6/86 (6%) Query: 89 SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148 +LP+++ + ++D+G G G + + +P + DIS AL I S Sbjct: 196 TLPKLDGK----VIDIGCGAGVLGCVMATLNPEIELEMTDIS--ALAIRSSQETLQANQL 249 Query: 149 RFDTLQSDWFSSVEGLFDVIVSNPPY 174 R SD FS +D IV+NPP+ Sbjct: 250 RGRVYPSDMFSDTGTQYDYIVTNPPF 275 >gi|291615247|ref|YP_003525404.1| methyltransferase type 11 [Sideroxydans lithotrophicus ES-1] gi|291585359|gb|ADE13017.1| Methyltransferase type 11 [Sideroxydans lithotrophicus ES-1] Length = 285 Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust. Identities = 19/52 (36%), Positives = 29/52 (55%) Query: 96 RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147 RD ++LD+ GTG L+ K +P K D+S + LE+A NA G++ Sbjct: 48 RDTSQVLDIAAGTGEPGLSAAKLTPRGKVTLTDLSERMLEVANENAAHRGLA 99 >gi|256810806|ref|YP_003128175.1| methyltransferase small [Methanocaldococcus fervens AG86] gi|256794006|gb|ACV24675.1| methyltransferase small [Methanocaldococcus fervens AG86] Length = 210 Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust. Identities = 33/129 (25%), Positives = 56/129 (43%), Gaps = 19/129 (14%) Query: 62 NVRLTLSSDTFEPRPETEL---LVDSALAFSLPRIEKRDVVR--ILDLGTGTG--AVCLA 114 ++ + L S P P+ +L +D LA + D ++DLG GTG A+ Sbjct: 6 HLEMILDSLKSHPNPKADLEQYTIDGKLASDILFFAVNDFYGNVVIDLGCGTGRLAIGSK 65 Query: 115 LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---------DTLQSDWFSSVEGLF 165 +L + +G+DI +++E AK NA V F + +D + L Sbjct: 66 ILGAK---RAIGIDIDKESIETAKENAKKANVDVDFYCMDIRDVDNEFLNDILGEGKNLK 122 Query: 166 DVIVSNPPY 174 V++ NPP+ Sbjct: 123 KVVIQNPPF 131 >gi|197334549|ref|YP_002155201.1| methyltransferase [Vibrio fischeri MJ11] gi|262828790|sp|B5F9T8|TRMN6_VIBFM RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName: Full=tRNA m6A37 methyltransferase gi|197316039|gb|ACH65486.1| methyltransferase [Vibrio fischeri MJ11] Length = 234 Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust. Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 1/79 (1%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 +ILD+G GTG + L + + +++ A E+A+ N + ER + D+ S Sbjct: 39 QILDIGAGTGLLSLMSAQRNSNAHIDAIELMPIAAEVARLNFSQSPWKERLVLIHQDFLS 98 Query: 160 SVEGL-FDVIVSNPPYIES 177 +D I+ NPPY + Sbjct: 99 YQTAYEYDAIICNPPYFNN 117 >gi|94989256|ref|YP_597357.1| type I restriction-modification system methylation subunit [Streptococcus pyogenes MGAS9429] gi|94993144|ref|YP_601243.1| Type I restriction-modification system methylation subunit [Streptococcus pyogenes MGAS2096] gi|94542764|gb|ABF32813.1| type I restriction-modification system methylation subunit [Streptococcus pyogenes MGAS9429] gi|94546652|gb|ABF36699.1| Type I restriction-modification system methylation subunit [Streptococcus pyogenes MGAS2096] Length = 526 Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust. Identities = 24/90 (26%), Positives = 42/90 (46%), Gaps = 9/90 (10%) Query: 94 EKRDVVRILDLGTGTGAVCLALLK---ESPFFKGVGVDISCKALEIAKSNAVTNGVS--- 147 E + + + D G+G++ L K +S G +I+ +A+ N + +GV+ Sbjct: 215 EDQKGMTLYDPAMGSGSLLLNAKKYSHQSDTVSYYGQEINTSTYNLARMNMMLHGVAIEN 274 Query: 148 ---ERFDTLQSDWFSSVEGLFDVIVSNPPY 174 DTL +DW + FD ++ NPPY Sbjct: 275 QHLSNADTLDADWPTDEPTNFDGVLMNPPY 304 >gi|15965953|ref|NP_386306.1| putative methyltransferase transcription regulator protein [Sinorhizobium meliloti 1021] gi|15075222|emb|CAC46779.1| Probable transcriptional regulator [Sinorhizobium meliloti 1021] Length = 340 Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust. Identities = 20/48 (41%), Positives = 30/48 (62%), Gaps = 2/48 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148 +LDLGTGTG + L E + +G+GVD S L +A+SN G+++ Sbjct: 160 LLDLGTGTGRILQ--LFEGIYRRGIGVDASRDMLAVARSNLDRAGITK 205 >gi|329920434|ref|ZP_08277166.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Lactobacillus iners SPIN 1401G] gi|328936110|gb|EGG32563.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Lactobacillus iners SPIN 1401G] Length = 448 Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust. Identities = 32/95 (33%), Positives = 49/95 (51%), Gaps = 13/95 (13%) Query: 86 LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145 LA ++ DVV +D +G G + L++ K K +GV+I A++ AK NA+ NG Sbjct: 291 LAIQKAQLTANDVV--IDAYSGIGTIGLSVAKHVK--KVLGVEIVRDAVKDAKKNAILNG 346 Query: 146 VSE------RFDTLQSDWFSSVEGL-FDVIVSNPP 173 V+ + + L W + EGL DVI +PP Sbjct: 347 VNNAEYFEGKAEELMPQWAN--EGLKTDVIFVDPP 379 >gi|313147266|ref|ZP_07809459.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12] gi|313136033|gb|EFR53393.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12] Length = 463 Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust. Identities = 31/115 (26%), Positives = 57/115 (49%), Gaps = 17/115 (14%) Query: 72 FEPRPETELLVDSALAFSLPRIEKRDVV------RILDLGTGTGAVCLALLKESPFFKGV 125 F+ P++ +S A++L ++ RD + DL TGTG + + +++ + + Sbjct: 286 FKVGPKSFYQTNSGQAYNLYKV-ARDFAGLTGGELVYDLYTGTGTIANFVSRQAR--QVI 342 Query: 126 GVDISCKALEIAKSNAVTNGVSERF-------DTLQSDWFSSVEGLFDVIVSNPP 173 G++ +A+E AK NA NG+ D L D+ + G DVI+++PP Sbjct: 343 GIEYVPEAIEDAKVNAEINGIENTLFFAGDMKDILTQDFINQY-GRPDVIITDPP 396 >gi|227827665|ref|YP_002829445.1| methylase [Sulfolobus islandicus M.14.25] gi|229584869|ref|YP_002843371.1| methylase [Sulfolobus islandicus M.16.27] gi|227459461|gb|ACP38147.1| methylase [Sulfolobus islandicus M.14.25] gi|228019919|gb|ACP55326.1| methylase [Sulfolobus islandicus M.16.27] gi|323474723|gb|ADX85329.1| methylase [Sulfolobus islandicus REY15A] gi|323477451|gb|ADX82689.1| methylase [Sulfolobus islandicus HVE10/4] Length = 207 Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust. Identities = 41/155 (26%), Positives = 70/155 (45%), Gaps = 27/155 (17%) Query: 53 RILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG--A 110 RI+ +R F +L L+ T+EP +T++L++ L ++ K + ++LD+G+G+G Sbjct: 5 RIVEFRGF---KLCLNDQTYEPSDDTDILLN------LLKVGKGE--KVLDMGSGSGILG 53 Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIV 169 + ++ F + + L K N + N L D S + FDV + Sbjct: 54 IWSLIMGGKVIFVDINPYATTSTLCSLKVNNLYNS-PNYLGVLNCDLLSCLRKYDFDVAI 112 Query: 170 SNPPYIESVIVDCLGLEVRDFDPRI--SLDGGIDG 202 NPPY L V +++ I S GG DG Sbjct: 113 FNPPY----------LPVEEYNEWIGYSWSGGKDG 137 >gi|149174356|ref|ZP_01852983.1| cyclopropane-fatty-acyl-phospholipid synthase, putative [Planctomyces maris DSM 8797] gi|148846901|gb|EDL61237.1| cyclopropane-fatty-acyl-phospholipid synthase, putative [Planctomyces maris DSM 8797] Length = 367 Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust. Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 1/88 (1%) Query: 84 SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143 SAL+ + + +D + IL+LG G G++ L L + P + V S E + AV Sbjct: 110 SALSETCQHADIQDGMSILELGCGWGSLTLWLAENYPDSRITAVSNSHSQREYIEQQAVA 169 Query: 144 NGVSERFDTLQSDWFSSV-EGLFDVIVS 170 GV++R + +D + E +D +VS Sbjct: 170 RGVADRIQVITADMNEFIPEETYDRVVS 197 >gi|91791810|ref|YP_561461.1| ribosomal protein L11 methyltransferase [Shewanella denitrificans OS217] gi|123166517|sp|Q12S38|PRMA_SHEDO RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11 Mtase gi|91713812|gb|ABE53738.1| LSU ribosomal protein L11P methyltransferase [Shewanella denitrificans OS217] Length = 293 Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust. Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 4/73 (5%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++D G G+G + +A LK K GVDI +A++ +++NAV N V ++ + Sbjct: 161 EVIDFGCGSGILAIAALKLG-AKKVTGVDIDYQAIDASQANAVRNNVQDQLALYLPE--D 217 Query: 160 SVEGLF-DVIVSN 171 EGL DV+V+N Sbjct: 218 QPEGLIADVLVAN 230 >gi|330508817|ref|YP_004385245.1| methyltransferase [Methanosaeta concilii GP-6] gi|328929625|gb|AEB69427.1| methyltransferase, putative [Methanosaeta concilii GP-6] Length = 198 Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust. Identities = 29/83 (34%), Positives = 45/83 (54%), Gaps = 10/83 (12%) Query: 95 KRDVVRILDLGTGTG--AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152 + D+ + DLG GTG A+ AL+ + VGV+I AL A+ NA GV D Sbjct: 43 RNDLGTVCDLGCGTGVLAIGAALMGA----RAVGVEIDKDALATARKNAENLGV--HVDF 96 Query: 153 LQSDWFS-SVEGLFDVIVSNPPY 174 +++D +EG+ D ++ NPP+ Sbjct: 97 IRADVRKLELEGI-DTVIMNPPF 118 >gi|254672652|emb|CBA06466.1| ribosomal protein L11 methyltransferase [Neisseria meningitidis alpha275] Length = 262 Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust. Identities = 27/74 (36%), Positives = 38/74 (51%), Gaps = 11/74 (14%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDW 157 +LD G G+G + +A LK VGVDI +A+ + NA N V +F D L Sbjct: 134 VLDYGCGSGILTIAALKLG-AGSAVGVDIDEQAVRAGRDNAEQNNVDAQFFLPDGLP--- 189 Query: 158 FSSVEGLFDVIVSN 171 +G FDV+V+N Sbjct: 190 ----QGQFDVVVAN 199 >gi|228990041|ref|ZP_04150014.1| Methyltransferase [Bacillus pseudomycoides DSM 12442] gi|228769707|gb|EEM18297.1| Methyltransferase [Bacillus pseudomycoides DSM 12442] Length = 250 Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust. Identities = 34/138 (24%), Positives = 61/138 (44%), Gaps = 18/138 (13%) Query: 48 HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTG 107 ++ + R GW DF ++ T+E E + R + DV +LD+GTG Sbjct: 10 YDKVGRSNGW-DFSKLKYVTEGATWEFYEEV-----------IERCKSSDV--LLDIGTG 55 Query: 108 TGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEGLFD 166 G L + + F +G+D S +E A+SN VS RF ++S+ FD Sbjct: 56 GGENVLRIAPAALFM--IGIDNSSGMIETAQSNLEKASVSNVRFFQMESESLMFPHSFFD 113 Query: 167 VI-VSNPPYIESVIVDCL 183 ++ + P++ + + + Sbjct: 114 IVSCCHAPFVAAEVAKVI 131 >gi|167755129|ref|ZP_02427256.1| hypothetical protein CLORAM_00633 [Clostridium ramosum DSM 1402] gi|237733445|ref|ZP_04563926.1| methyltransferase [Mollicutes bacterium D7] gi|167705179|gb|EDS19758.1| hypothetical protein CLORAM_00633 [Clostridium ramosum DSM 1402] gi|229383480|gb|EEO33571.1| methyltransferase [Coprobacillus sp. D7] Length = 245 Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust. Identities = 22/81 (27%), Positives = 42/81 (51%), Gaps = 3/81 (3%) Query: 96 RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155 +DV +I+D GT A+ L LL + G++I +A+++A N N + + + + + Sbjct: 42 KDVKQIIDFGTNNAAIPL-LLSQRTNRPITGIEIQKEAVDLAIKNIELNNLETQINIVHA 100 Query: 156 DWFSSVEGLFDV--IVSNPPY 174 D V+ V ++ NPP+ Sbjct: 101 DIAEYVKDAKKVGLVICNPPF 121 >gi|55822680|ref|YP_141121.1| type I restriction-modification system methyltransferase subunit [Streptococcus thermophilus CNRZ1066] gi|55738665|gb|AAV62306.1| type I restriction-modification system methyltransferase subunit [Streptococcus thermophilus CNRZ1066] Length = 534 Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust. Identities = 30/112 (26%), Positives = 54/112 (48%), Gaps = 13/112 (11%) Query: 72 FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV---GVD 128 + P+P +L+ + +AF L R +K+ + D G+G++ L + S + V G + Sbjct: 200 YTPQPVAKLM--TQIAF-LGREDKQGFT-LYDATMGSGSLLLNAKRYSRQPQTVVYFGQE 255 Query: 129 ISCKALEIAKSNAVTNGVS------ERFDTLQSDWFSSVEGLFDVIVSNPPY 174 ++ +A+ N + +GV DTL DW + FD ++ NPPY Sbjct: 256 LNTSTYNLARMNMILHGVPIENQFLHNADTLDEDWPTQEPTNFDGVLMNPPY 307 >gi|13357655|ref|NP_077929.1| type I restriction enzyme M protein (fragment) [Ureaplasma parvum serovar 3 str. ATCC 700970] gi|170762197|ref|YP_001752181.1| type I restriction-modification system, M subunit [Ureaplasma parvum serovar 3 str. ATCC 27815] gi|183508500|ref|ZP_02689853.2| type I restriction-modification system, M subunit [Ureaplasma parvum serovar 14 str. ATCC 33697] gi|11357066|pir||E82933 type I restriction enzyme M protein, truncated homolog UU098 [imported] - Ureaplasma urealyticum gi|6899053|gb|AAF30504.1|AE002110_2 type I restriction enzyme M protein (fragment) [Ureaplasma parvum serovar 3 str. ATCC 700970] gi|168827774|gb|ACA33036.1| type I restriction-modification system, M subunit [Ureaplasma parvum serovar 3 str. ATCC 27815] gi|182675928|gb|EDT87833.1| type I restriction-modification system, M subunit [Ureaplasma parvum serovar 14 str. ATCC 33697] Length = 348 Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust. Identities = 31/110 (28%), Positives = 54/110 (49%), Gaps = 7/110 (6%) Query: 72 FEPRPETELLVDSALA-FSLPRIE-KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129 F P+ +ELLV+ L F+ + +R + ++ D G+G++ L K + K G +I Sbjct: 25 FTPQEVSELLVELTLIDFNNENKDVRRKIGKVYDPCCGSGSLLLKYAKLNEGVKFYGQEI 84 Query: 130 SCKALEIAKSNAVTNGVS-ERFDTLQSDWF----SSVEGLFDVIVSNPPY 174 + +A+ N + + ++FD D + + FD IVSNPPY Sbjct: 85 NLTTYNLARINMFLHNIGYDKFDIKLGDTLLDPKHNDDKPFDAIVSNPPY 134 >gi|318080044|ref|ZP_07987376.1| Methyltransferase type 12 [Streptomyces sp. SA3_actF] Length = 385 Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust. Identities = 21/56 (37%), Positives = 28/56 (50%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 I+DLG+GTGA ALL P VD S L+ + A G+ R T+ +D Sbjct: 173 IVDLGSGTGAGTFALLARFPEAHVTAVDSSAPHLQRLREKACAAGLDGRVRTVHAD 228 >gi|317486424|ref|ZP_07945251.1| hypothetical protein HMPREF0179_02609 [Bilophila wadsworthia 3_1_6] gi|316922334|gb|EFV43593.1| hypothetical protein HMPREF0179_02609 [Bilophila wadsworthia 3_1_6] Length = 262 Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust. Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 9/86 (10%) Query: 98 VVRILDLGTGTGAVCLA-LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF------ 150 +R +DLGTG G V LA LL + +G G+D + + + A++N G S+RF Sbjct: 56 TMRFIDLGTGCGVVGLAYLLLKRNICQGFGMDCNPELIAAAQNNTAKLGFSDRFALHTGE 115 Query: 151 --DTLQSDWFSSVEGLFDVIVSNPPY 174 DT + ++++NPP+ Sbjct: 116 LADTRFLENLRMEASPVQLVMANPPW 141 >gi|254519875|ref|ZP_05131931.1| ribosomal protein L11 methyltransferase [Clostridium sp. 7_2_43FAA] gi|226913624|gb|EEH98825.1| ribosomal protein L11 methyltransferase [Clostridium sp. 7_2_43FAA] Length = 313 Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust. Identities = 40/142 (28%), Positives = 65/142 (45%), Gaps = 15/142 (10%) Query: 89 SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148 SL + K D + D+G G+G + +A K VGVD+ A+E AK N N + E Sbjct: 170 SLEKYVKEDST-VFDVGCGSGILAIAAAKLGSKM-AVGVDLDPVAVESAKENVGYNNL-E 226 Query: 149 RFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG---IDGLSH 205 L + ++G D++V+N +I + + + D R+ D G G+ H Sbjct: 227 NIQILYGNLVEVIDGKADIVVAN------IIAEVICILTEDV-KRVLKDNGYFITSGIIH 279 Query: 206 YRTIADGVSRHLNKDGLCSVEI 227 R D V++ L + G +EI Sbjct: 280 DRV--DMVTKKLEETGFEVIEI 299 >gi|212638661|ref|YP_002315181.1| SAM-dependent methyltransferase [Anoxybacillus flavithermus WK1] gi|212560141|gb|ACJ33196.1| SAM-dependent methyltransferase [Anoxybacillus flavithermus WK1] Length = 246 Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust. Identities = 27/70 (38%), Positives = 36/70 (51%), Gaps = 3/70 (4%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+LDLG GTG + + L ++ F GVD+S + L IA+ A GV+ F F Sbjct: 38 RLLDLGCGTGELAIRLAEKG--FDVTGVDLSEQMLTIAQMKAEERGVNLSFFQQDMREFG 95 Query: 160 SVEGLFDVIV 169 E FD IV Sbjct: 96 PFEP-FDTIV 104 >gi|182433848|ref|YP_001821567.1| putative methyltransferase [Streptomyces griseus subsp. griseus NBRC 13350] gi|182440875|ref|YP_001828594.1| putative methyltransferase [Streptomyces griseus subsp. griseus NBRC 13350] gi|178462364|dbj|BAG16884.1| putative methyltransferase [Streptomyces griseus subsp. griseus NBRC 13350] gi|178469391|dbj|BAG23911.1| putative methyltransferase [Streptomyces griseus subsp. griseus NBRC 13350] Length = 238 Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust. Identities = 19/42 (45%), Positives = 24/42 (57%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140 +R+LDLG GTGA AL+ +P GVD S LE A + Sbjct: 50 LRVLDLGCGTGASTEALIAAAPLASVTGVDASAGMLERAAAK 91 >gi|119867652|ref|YP_937604.1| methyltransferase type 11 [Mycobacterium sp. KMS] gi|126434151|ref|YP_001069842.1| methyltransferase type 11 [Mycobacterium sp. JLS] gi|119693741|gb|ABL90814.1| Methyltransferase type 11 [Mycobacterium sp. KMS] gi|126233951|gb|ABN97351.1| Methyltransferase type 11 [Mycobacterium sp. JLS] Length = 210 Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust. Identities = 21/65 (32%), Positives = 36/65 (55%), Gaps = 4/65 (6%) Query: 93 IEKRDVVR--ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150 +E+R + +LD G G G + L + +GVD S +A+E+A++NA GV+ RF Sbjct: 34 LERRGAISGAVLDAGCGAGEHTILLTGLG--YDVLGVDFSARAVELARANAAARGVNARF 91 Query: 151 DTLQS 155 + + Sbjct: 92 EVADA 96 >gi|55820777|ref|YP_139219.1| type I restriction-modification system methyltransferase subunit [Streptococcus thermophilus LMG 18311] gi|55736762|gb|AAV60404.1| type I restriction-modification system methyltransferase subunit [Streptococcus thermophilus LMG 18311] Length = 534 Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust. Identities = 30/112 (26%), Positives = 54/112 (48%), Gaps = 13/112 (11%) Query: 72 FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV---GVD 128 + P+P +L+ + +AF L R +K+ + D G+G++ L + S + V G + Sbjct: 200 YTPQPVAKLM--TQIAF-LGREDKQGFT-LYDATMGSGSLLLNAKRYSRQPQTVVYFGQE 255 Query: 129 ISCKALEIAKSNAVTNGVS------ERFDTLQSDWFSSVEGLFDVIVSNPPY 174 ++ +A+ N + +GV DTL DW + FD ++ NPPY Sbjct: 256 LNTSTYNLARMNMILHGVPIENQFLHNADTLDEDWPTQEPTNFDGVLMNPPY 307 >gi|19746827|ref|NP_607963.1| type I site-specific deoxyribonuclease [Streptococcus pyogenes MGAS8232] gi|19749065|gb|AAL98462.1| putative type I site-specific deoxyribonuclease [Streptococcus pyogenes MGAS8232] Length = 526 Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust. Identities = 24/90 (26%), Positives = 42/90 (46%), Gaps = 9/90 (10%) Query: 94 EKRDVVRILDLGTGTGAVCLALLK---ESPFFKGVGVDISCKALEIAKSNAVTNGVS--- 147 E + + + D G+G++ L K +S G +I+ +A+ N + +GV+ Sbjct: 215 EDQKGMTLYDPAMGSGSLLLNAKKYSNQSDTVSYYGQEINTSTYNLARMNMMLHGVAIEN 274 Query: 148 ---ERFDTLQSDWFSSVEGLFDVIVSNPPY 174 DTL +DW + FD ++ NPPY Sbjct: 275 QHLSNADTLDADWPTDEPTNFDGVLMNPPY 304 >gi|21911180|ref|NP_665448.1| putative type I site-specific deoxyribonuclease hsdM modification subunit [Streptococcus pyogenes MGAS315] gi|28896556|ref|NP_802906.1| type I site-specific deoxyribonuclease [Streptococcus pyogenes SSI-1] gi|21905392|gb|AAM80251.1| putative type I site-specific deoxyribonuclease hsdM modification subunit [Streptococcus pyogenes MGAS315] gi|28811810|dbj|BAC64739.1| putative type I site-specific deoxyribonuclease [Streptococcus pyogenes SSI-1] Length = 526 Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust. Identities = 24/90 (26%), Positives = 42/90 (46%), Gaps = 9/90 (10%) Query: 94 EKRDVVRILDLGTGTGAVCLALLK---ESPFFKGVGVDISCKALEIAKSNAVTNGVS--- 147 E + + + D G+G++ L K +S G +I+ +A+ N + +GV+ Sbjct: 215 EDQKGMTLYDPAMGSGSLLLNAKKYSNQSDTVSYYGQEINTSTYNLARMNMMLHGVAIEN 274 Query: 148 ---ERFDTLQSDWFSSVEGLFDVIVSNPPY 174 DTL +DW + FD ++ NPPY Sbjct: 275 QHLSNADTLDADWPTDEPTNFDGVLMNPPY 304 >gi|198426404|ref|XP_002120567.1| PREDICTED: similar to Williams-Beuren syndrome chromosome region 27-like [Ciona intestinalis] Length = 231 Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust. Identities = 32/109 (29%), Positives = 55/109 (50%), Gaps = 6/109 (5%) Query: 87 AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG--VGVDISCKALEIAKSNAVTN 144 A +L E++ V ++LDLG+GTG V ++L K F+G +D + + L++AK + N Sbjct: 53 AATLLSEEQKKVFKVLDLGSGTGLVGVSLRKFG--FQGEVTALDGAAEMLQLAKKKNIYN 110 Query: 145 GVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV-DCLGLEVRDFDP 192 + TL + FD+I+S + +++ DCL R P Sbjct: 111 DCHQHILTLNHP-LPYPDDNFDLIISVGGFGNNMMQPDCLQEVFRVLKP 158 >gi|19074311|ref|NP_585817.1| N6 ADENINE SPECIFIC DNA METHYLASE (METHYLTRANSFERASE SUPERFAMILY) [Encephalitozoon cuniculi GB-M1] gi|19068953|emb|CAD25421.1| N6 ADENINE SPECIFIC DNA METHYLASE (METHYLTRANSFERASE SUPERFAMILY) [Encephalitozoon cuniculi GB-M1] Length = 164 Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust. Identities = 36/106 (33%), Positives = 52/106 (49%), Gaps = 18/106 (16%) Query: 70 DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129 D +EP +T L+D+ L R E ++ +LDLGT TG + L K + V D+ Sbjct: 2 DWYEPGEDTYTLMDA-----LER-EGLEMKIVLDLGTSTGVITEQLRKRNTV---VSTDL 52 Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYI 175 + +ALE + + R D L S SV DV+V NPPY+ Sbjct: 53 NIRALESHRGGNLV-----RADLLCSINQESV----DVVVFNPPYV 89 >gi|95928734|ref|ZP_01311480.1| ribosomal L11 methyltransferase [Desulfuromonas acetoxidans DSM 684] gi|95135079|gb|EAT16732.1| ribosomal L11 methyltransferase [Desulfuromonas acetoxidans DSM 684] Length = 198 Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust. Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 1/82 (1%) Query: 90 LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 L +E + ILDLG+GTG + +A LK V +DI A+ + N+ NGV Sbjct: 53 LEDLEGVNGATILDLGSGTGILAIAALKLGA-RSAVCIDIDPAAVATCRLNSQLNGVDAD 111 Query: 150 FDTLQSDWFSSVEGLFDVIVSN 171 D + + E +D++++N Sbjct: 112 IDHVCGTLSNLPEAAYDLVLAN 133 >gi|256617125|ref|ZP_05473971.1| type I restriction-modification system M subunit [Enterococcus faecalis ATCC 4200] gi|256596652|gb|EEU15828.1| type I restriction-modification system M subunit [Enterococcus faecalis ATCC 4200] Length = 304 Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust. Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 9/94 (9%) Query: 107 GTGAVCLAL---LKESPFFKGVGVDISCKALEIAKSNAVTNGV-SERF-----DTLQSDW 157 G+G++ L + L K G +++ +AK N + +GV +E DTL DW Sbjct: 2 GSGSLMLNVRNYLTHPDNVKYHGQELNTTTYNLAKMNLILHGVDAEEMNLRNGDTLNKDW 61 Query: 158 FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFD 191 + FD +V NPPY + D L+ F+ Sbjct: 62 PTDEPYTFDAVVMNPPYSANWSADTTFLDDSRFN 95 >gi|33865023|ref|NP_896582.1| hypothetical protein SYNW0487 [Synechococcus sp. WH 8102] gi|33638707|emb|CAE07002.1| conserved hypothetical protein [Synechococcus sp. WH 8102] Length = 389 Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust. Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 4/75 (5%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 RILD G GTG L +P + +G+DIS AL +A+ +G + + L+ + S Sbjct: 61 RILDAGCGTGVSTDYLCHLNPGAEVLGIDISEGALAVARERLQRSGAAAQVSQLRQEQRS 120 Query: 160 ----SVEGLFDVIVS 170 EG FD I S Sbjct: 121 LLDLESEGPFDYINS 135 >gi|27904799|ref|NP_777925.1| ribosomal RNA small subunit methyltransferase C [Buchnera aphidicola str. Bp (Baizongia pistaciae)] gi|38503321|sp|Q89AI2|RSMC_BUCBP RecName: Full=Ribosomal RNA small subunit methyltransferase C; AltName: Full=16S rRNA m2G1207 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rsmC gi|27904197|gb|AAO27030.1| ribosomal RNA small subunit methyltransferase C [Buchnera aphidicola str. Bp (Baizongia pistaciae)] Length = 326 Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust. Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 3/74 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LD+G G+G + L P K +D + ALE +K +N V + S+ +S+ Sbjct: 185 VLDIGCGSGVLSTYLATIFPEIKLTLIDSNIAALESSKLTLTSNNVCG--EIFPSNIYSN 242 Query: 161 VEGL-FDVIVSNPP 173 V FD+I+SNPP Sbjct: 243 VHYQNFDLIISNPP 256 >gi|223932616|ref|ZP_03624616.1| putative RNA methylase [Streptococcus suis 89/1591] gi|330832240|ref|YP_004401065.1| putative RNA methylase [Streptococcus suis ST3] gi|223898726|gb|EEF65087.1| putative RNA methylase [Streptococcus suis 89/1591] gi|329306463|gb|AEB80879.1| putative RNA methylase [Streptococcus suis ST3] Length = 388 Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust. Identities = 25/64 (39%), Positives = 33/64 (51%), Gaps = 13/64 (20%) Query: 125 VGVDISCKALEIAKSNAVTNGVSE-------RFDTLQSDWFSSVEGLFDVIVSNPPYIES 177 G DI + +EIAK NA GV + R L+SD + G VI+SNPPY E Sbjct: 260 AGSDIDARMIEIAKKNAFAAGVEQDIVFKQMRVQDLRSD---KING---VIISNPPYGER 313 Query: 178 VIVD 181 ++ D Sbjct: 314 LLDD 317 >gi|302417188|ref|XP_003006425.1| methyltransferase [Verticillium albo-atrum VaMs.102] gi|261354027|gb|EEY16455.1| methyltransferase [Verticillium albo-atrum VaMs.102] Length = 282 Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust. Identities = 26/64 (40%), Positives = 35/64 (54%), Gaps = 3/64 (4%) Query: 87 AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146 AF LP I+ D RILD+G G G + P + VG+DIS + L A+S +V G+ Sbjct: 36 AFVLPLIDPAD--RILDVGCGPGTITTGFATIVPQGEVVGIDISDEVLATARS-SVPAGL 92 Query: 147 SERF 150 S F Sbjct: 93 SNIF 96 >gi|260583861|ref|ZP_05851609.1| SmtA protein [Granulicatella elegans ATCC 700633] gi|260158487|gb|EEW93555.1| SmtA protein [Granulicatella elegans ATCC 700633] Length = 258 Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust. Identities = 18/47 (38%), Positives = 30/47 (63%), Gaps = 1/47 (2%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145 +++LD+GTG G + +L+E + +G+D+S K LE+AK N G Sbjct: 48 LKVLDIGTGPGFFTI-ILEELGYTNIMGIDVSEKMLEVAKENIQKYG 93 >gi|253571414|ref|ZP_04848820.1| conserved hypothetical protein [Bacteroides sp. 1_1_6] gi|251838622|gb|EES66707.1| conserved hypothetical protein [Bacteroides sp. 1_1_6] Length = 246 Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust. Identities = 28/72 (38%), Positives = 37/72 (51%), Gaps = 3/72 (4%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+LDLG G G C+ + E VGVDIS K LE+AK V + ++ F Sbjct: 45 RVLDLGCGYGWHCIYAM-EHGASSVVGVDISHKMLEVAKEKTHFPQVEYKCCAIEDVEFP 103 Query: 160 SVEGLFDVIVSN 171 E FDVI+S+ Sbjct: 104 --EESFDVILSS 113 >gi|239905332|ref|YP_002952071.1| putative ubiquinone/menaquinone biosynthesis methyltransferase UbiE [Desulfovibrio magneticus RS-1] gi|239795196|dbj|BAH74185.1| putative ubiquinone/menaquinone biosynthesis methyltransferase UbiE [Desulfovibrio magneticus RS-1] Length = 242 Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust. Identities = 17/47 (36%), Positives = 27/47 (57%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147 +LD TGTG V LA+ + P +G+D S L++A++ A V+ Sbjct: 60 VLDAATGTGEVALAIRRRRPGLTVIGLDFSPAMLDVARAKAAKAQVA 106 >gi|228995075|ref|ZP_04154823.1| Methyltransferase type 11 [Bacillus pseudomycoides DSM 12442] gi|228764670|gb|EEM13471.1| Methyltransferase type 11 [Bacillus pseudomycoides DSM 12442] Length = 207 Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust. Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 10/79 (12%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKS----NAVTNGVSERFDTLQS 155 +ILD+GTG+G++ + L K P G+D E +K+ NA GVS+R D L++ Sbjct: 40 KILDIGTGSGSLIIKLAKTFPKSFLTGIDYWGGNWEYSKAQCQQNAEIEGVSDRVDFLKA 99 Query: 156 DW----FSSVEGLFDVIVS 170 F+ E FD+IVS Sbjct: 100 SAAELPFNDDE--FDIIVS 116 >gi|139474406|ref|YP_001129122.1| type I restriction-modification system M protein [Streptococcus pyogenes str. Manfredo] gi|134272653|emb|CAM30920.1| type I restriction-modification system M protein [Streptococcus pyogenes str. Manfredo] Length = 526 Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust. Identities = 24/90 (26%), Positives = 42/90 (46%), Gaps = 9/90 (10%) Query: 94 EKRDVVRILDLGTGTGAVCLALLK---ESPFFKGVGVDISCKALEIAKSNAVTNGVS--- 147 E + + + D G+G++ L K +S G +I+ +A+ N + +GV+ Sbjct: 215 EDQKGMTLYDPAMGSGSLLLNAKKYSNQSDTVSYYGQEINTSTYNLARMNMMLHGVAIEN 274 Query: 148 ---ERFDTLQSDWFSSVEGLFDVIVSNPPY 174 DTL +DW + FD ++ NPPY Sbjct: 275 QHLSNADTLDADWPTDEPTNFDGVLMNPPY 304 >gi|120603527|ref|YP_967927.1| hypothetical protein Dvul_2484 [Desulfovibrio vulgaris DP4] gi|120563756|gb|ABM29500.1| conserved hypothetical protein [Desulfovibrio vulgaris DP4] Length = 438 Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust. Identities = 23/54 (42%), Positives = 29/54 (53%) Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 DLGTG G V LALL S GVG++ + A+ NA G+S RF +D Sbjct: 166 DLGTGCGVVGLALLLGSSRLSGVGIEQDAALVNAARVNAHRLGLSTRFTVHHAD 219 >gi|15669072|ref|NP_247877.1| hypothetical protein MJ_0882 [Methanocaldococcus jannaschii DSM 2661] gi|2842581|sp|Q58292|Y882_METJA RecName: Full=Putative protein methyltransferase MJ0882 gi|1499712|gb|AAB98886.1| conserved hypothetical protein [Methanocaldococcus jannaschii DSM 2661] Length = 197 Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust. Identities = 25/76 (32%), Positives = 43/76 (56%), Gaps = 6/76 (7%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD--TLQSDWF 158 ILDLG G G + +AL E DI+ +A+++AK N N + + +D + SD + Sbjct: 59 ILDLGCGYGVIGIALADEVK--STTMADINRRAIKLAKENIKLNNL-DNYDIRVVHSDLY 115 Query: 159 SSVEG-LFDVIVSNPP 173 +V+ ++ I++NPP Sbjct: 116 ENVKDRKYNKIITNPP 131 >gi|85714020|ref|ZP_01045009.1| 2-dehydropantoate 2-reductase [Nitrobacter sp. Nb-311A] gi|85699146|gb|EAQ37014.1| 2-dehydropantoate 2-reductase [Nitrobacter sp. Nb-311A] Length = 324 Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust. Identities = 30/108 (27%), Positives = 53/108 (49%), Gaps = 7/108 (6%) Query: 152 TLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIAD 211 T+Q+D S G FD+I+ + + + D + R PR ++ ++G+ H RT+ Sbjct: 77 TVQADGLS---GTFDLILLSCKAFD--LEDAIASFARAAGPRTAIIPLLNGMRHLRTLDA 131 Query: 212 GVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRV 259 R GLCS+ + N+K +VV + + L +D G ++RV Sbjct: 132 VFGRERVLGGLCSLAVTLNEKREVVHLAPMQSLRFGE--RDGGMSERV 177 >gi|228995690|ref|ZP_04155353.1| Uncharacterized RNA methyltransferase [Bacillus mycoides Rock3-17] gi|229003319|ref|ZP_04161149.1| Uncharacterized RNA methyltransferase [Bacillus mycoides Rock1-4] gi|228757937|gb|EEM07152.1| Uncharacterized RNA methyltransferase [Bacillus mycoides Rock1-4] gi|228764067|gb|EEM12951.1| Uncharacterized RNA methyltransferase [Bacillus mycoides Rock3-17] Length = 465 Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust. Identities = 32/121 (26%), Positives = 64/121 (52%), Gaps = 17/121 (14%) Query: 62 NVRLTLSSDTFEP--RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119 +++ +S+ +F R +T++L D AL ++ +++ + V +D G G++ L L +++ Sbjct: 285 DIKFAISARSFYQVNREQTKVLYDKALEYA--KLDGNETV--IDAYCGIGSISLFLAQKA 340 Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSE------RFDTLQSDWFSSVEGLF-DVIVSNP 172 K GV+I +A+E A NA N ++ + + +W+ EG+ D IV +P Sbjct: 341 K--KVYGVEIVPEAIEDANRNAALNNMTNAEFAVGEAEVVIPNWYK--EGVIADTIVVDP 396 Query: 173 P 173 P Sbjct: 397 P 397 >gi|223998224|ref|XP_002288785.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|220975893|gb|EED94221.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 417 Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust. Identities = 18/48 (37%), Positives = 28/48 (58%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147 RI+DLG GTG + + E P+ + GVD+S + +I++ NG S Sbjct: 297 RIVDLGCGTGLLGELVANEMPWVEVYGVDLSQRMADISRERKTVNGTS 344 >gi|118388069|ref|XP_001027135.1| dimethyladenosine transferase family protein [Tetrahymena thermophila] gi|89308905|gb|EAS06893.1| dimethyladenosine transferase family protein [Tetrahymena thermophila SB210] Length = 345 Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust. Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 2/74 (2%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +L++G GTG + LL+++ K + V+I + + + + +F+ +Q D S+ Sbjct: 39 VLEIGPGTGNLTALLLEKAK--KVIAVEIDPRMVAELNKRFKYSQHAHKFELIQGDAIST 96 Query: 161 VEGLFDVIVSNPPY 174 FDV V+N PY Sbjct: 97 EFPFFDVCVANTPY 110 >gi|47459066|ref|YP_015928.1| O-methyltransferase putative nucleic acid modification enzyme [Mycoplasma mobile 163K] gi|47458395|gb|AAT27717.1| O-methyltransferase putative nucleic acid modification enzyme [Mycoplasma mobile 163K] Length = 257 Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust. Identities = 32/156 (20%), Positives = 67/156 (42%), Gaps = 18/156 (11%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS- 159 IL++GT A+ + + + + K +++ KA+ +A N + N E+ + +++ S Sbjct: 51 ILEIGTNNAALAIFVSERNKNIKIDAIELQKKAIHLANFNVIMNSKEEQISIIHANFNSF 110 Query: 160 ------SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213 + +D I+ NPP+ + +G + L D ++ + G Sbjct: 111 WKKHNKNQAKKYDSIICNPPFYQ------IGKRQLKNVSKEKLIATYDLKLNFDQLIKGA 164 Query: 214 SRHLNKDGLCSVEIGYNQKVDVVRI-----FESRKL 244 S+ + + G SV I + +D I FE +K+ Sbjct: 165 SKIIKQKGYFSVVIPTERSIDFFTILRKYDFEPKKV 200 >gi|78062726|ref|YP_372634.1| methylase involved in ubiquinone/menaquinone biosynthesis-like [Burkholderia sp. 383] gi|77970611|gb|ABB11990.1| Methylase involved in ubiquinone/menaquinone biosynthesis-like protein [Burkholderia sp. 383] Length = 282 Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust. Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 9/76 (11%) Query: 76 PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE-SPFFKGVGVDISCKAL 134 P +LLVD+A S +LD+G GTGAV LA+ + + G+DIS + + Sbjct: 35 PLEKLLVDAAAPSS--------ARSVLDVGCGTGAVTLAIARRLGADVQCTGIDISARMI 86 Query: 135 EIAKSNAVTNGVSERF 150 + A++ A + V RF Sbjct: 87 DAAQARAERSSVPVRF 102 >gi|86148148|ref|ZP_01066447.1| 16S RNA G1207 methylase RsmC [Vibrio sp. MED222] gi|85834065|gb|EAQ52224.1| 16S RNA G1207 methylase RsmC [Vibrio sp. MED222] Length = 340 Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust. Identities = 31/128 (24%), Positives = 56/128 (43%), Gaps = 21/128 (16%) Query: 57 WRDFYNVRLTLSSDTFEPRPE----------TELLVDSALAFSLPRIEKRDVVRILDLGT 106 W Y V + S T + P ++LL+D+ LP+++ + +LD G Sbjct: 159 WFKTYTVNIGEQSLTVKSLPGVFSHGQFDVGSQLLLDT-----LPKLKGK----VLDFGC 209 Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFD 166 G G + + P + DIS A+ +++ NG++ + SD +S + Sbjct: 210 GAGVLGAVMASRHPDIELEMCDISAFAVASSQATLEANGLTG--NVFASDVYSDTSKDYQ 267 Query: 167 VIVSNPPY 174 I+SNPP+ Sbjct: 268 FIISNPPF 275 >gi|254804314|ref|YP_003082535.1| ribosomal protein L11 methyltransferase [Neisseria meningitidis alpha14] gi|254667856|emb|CBA03901.1| ribosomal protein L11 methyltransferase [Neisseria meningitidis alpha14] Length = 330 Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust. Identities = 27/74 (36%), Positives = 38/74 (51%), Gaps = 11/74 (14%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDW 157 +LD G G+G + +A LK VGVDI +A+ + NA N V +F D L Sbjct: 202 VLDYGCGSGILTIAALKLG-AGSAVGVDIDEQAVRAGRDNAEQNNVDAQFFLPDGLP--- 257 Query: 158 FSSVEGLFDVIVSN 171 +G FDV+V+N Sbjct: 258 ----QGQFDVVVAN 267 >gi|239620771|ref|ZP_04663802.1| trans-aconitate 2-methyltransferase [Bifidobacterium longum subsp. infantis CCUG 52486] gi|239516347|gb|EEQ56214.1| trans-aconitate 2-methyltransferase [Bifidobacterium longum subsp. infantis CCUG 52486] Length = 141 Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust. Identities = 31/91 (34%), Positives = 40/91 (43%), Gaps = 14/91 (15%) Query: 86 LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV--- 142 LA LP + V R+LD+G G G L + P K +GVD S +E A+ Sbjct: 29 LAMQLP-PDDGSVTRVLDIGCGPGNSTAVLRERYPHAKILGVDSSPVMIETARKTYPDID 87 Query: 143 --TNGVSERFDTLQSDWFSSVEGLFDVIVSN 171 VS R D L +D FDV+ SN Sbjct: 88 FQLCDVSARLDELPAD--------FDVVFSN 110 >gi|221310470|ref|ZP_03592317.1| ribosomal protein L11 methyltransferase [Bacillus subtilis subsp. subtilis str. 168] gi|221314793|ref|ZP_03596598.1| ribosomal protein L11 methyltransferase [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221319716|ref|ZP_03601010.1| ribosomal protein L11 methyltransferase [Bacillus subtilis subsp. subtilis str. JH642] gi|221323993|ref|ZP_03605287.1| ribosomal protein L11 methyltransferase [Bacillus subtilis subsp. subtilis str. SMY] gi|255767585|ref|NP_390423.2| ribosomal protein L11 methyltransferase [Bacillus subtilis subsp. subtilis str. 168] gi|321312029|ref|YP_004204316.1| ribosomal protein L11 methyltransferase [Bacillus subtilis BSn5] gi|251757309|sp|P54460|PRMA_BACSU RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11 Mtase gi|225185213|emb|CAB14487.2| ribosomal protein L11 methyltransferase [Bacillus subtilis subsp. subtilis str. 168] gi|320018303|gb|ADV93289.1| ribosomal protein L11 methyltransferase [Bacillus subtilis BSn5] Length = 311 Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust. Identities = 35/141 (24%), Positives = 65/141 (46%), Gaps = 30/141 (21%) Query: 56 GWRDFYN-------VRLTLSSDTFEPRPETELLV--DSALAF-------------SLPR- 92 W+ +Y+ + + + + P EL++ D +AF +L R Sbjct: 113 AWKKYYHPVKISEKFTIVPTWEEYTPVHTDELIIEMDPGMAFGTGTHPTTVLCIQALERF 172 Query: 93 IEKRDVVRILDLGTGTG--AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150 ++K D +++D+GTG+G ++ A+L+ D+ A+E A+ N N VS+ Sbjct: 173 VQKGD--KVIDVGTGSGILSIAAAMLEAESVH---AYDLDPVAVESARLNLKLNKVSDIA 227 Query: 151 DTLQSDWFSSVEGLFDVIVSN 171 Q++ +EG DVIV+N Sbjct: 228 QVKQNNLLDGIEGEHDVIVAN 248 >gi|104780129|ref|YP_606627.1| ribosomal RNA small subunit methyltransferase C [Pseudomonas entomophila L48] gi|226712963|sp|Q1IEU2|RSMC_PSEE4 RecName: Full=Ribosomal RNA small subunit methyltransferase C; AltName: Full=16S rRNA m2G1207 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rsmC gi|95109116|emb|CAK13813.1| putative ribosomal RNA small subunit methyltransferase C [Pseudomonas entomophila L48] Length = 332 Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust. Identities = 23/100 (23%), Positives = 43/100 (43%), Gaps = 2/100 (2%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 +D A L ++ +LD G G G + + + P + +D+ A+ ++ Sbjct: 176 LDKGTALLLEHLDGLPSGHVLDFGCGAGVLGATIKRRYPQSQVTLLDVDAFAVAASRLTL 235 Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181 NG+ + + D + G D+I+SNPP+ V D Sbjct: 236 AANGLEGQ--VISGDGIDAAPGELDLILSNPPFHTGVHTD 273 >gi|194467963|ref|ZP_03073949.1| type I restriction-modification system, M subunit [Lactobacillus reuteri 100-23] gi|194452816|gb|EDX41714.1| type I restriction-modification system, M subunit [Lactobacillus reuteri 100-23] Length = 549 Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust. Identities = 35/143 (24%), Positives = 66/143 (46%), Gaps = 22/143 (15%) Query: 100 RILDLGTGTGAVCLALLKESPF--FKGVGVDISCKALEIAKSNAVTNGVS------ERFD 151 + D G+G++ L + + P K G +++ +A+ N + + V + D Sbjct: 228 EVYDFACGSGSLLLTVQDQVPNRRLKYAGQELNTTTYNLARMNLMMHDVRYQNMTLKNAD 287 Query: 152 TLQSDWFSSVE--GL-----FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI--DG 202 TL+ DW ++ G+ FD++V+NPPY S D +++ DPR G + Sbjct: 288 TLEMDWPDGIDEHGVDHPHSFDMVVANPPY--SARWDNNDNKLK--DPRFKEYGALAPKT 343 Query: 203 LSHYRTIADGVSRHLNKDGLCSV 225 + Y + G+ HL +DG ++ Sbjct: 344 KADYAFLLHGL-YHLKQDGTMAI 365 >gi|20094927|ref|NP_614774.1| rRNA/ tRNA methylase [Methanopyrus kandleri AV19] gi|19888169|gb|AAM02704.1| Predicted rRNA/ tRNA methylase [Methanopyrus kandleri AV19] Length = 196 Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust. Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 5/77 (6%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+LD+GTG G L+ + + V D++ A+ A+ NA N ++ D D F Sbjct: 43 RVLDVGTGCGIQGLSAAAKG--CEVVATDVNPAAVHCARWNAHLNDLN--IDVRVGDLFE 98 Query: 160 SV-EGLFDVIVSNPPYI 175 V + FD+++ NPPY+ Sbjct: 99 PVRDERFDIVLFNPPYL 115 >gi|56808773|ref|ZP_00366489.1| COG0286: Type I restriction-modification system methyltransferase subunit [Streptococcus pyogenes M49 591] gi|209560056|ref|YP_002286528.1| Putative type I site-specific deoxyribonuclease [Streptococcus pyogenes NZ131] gi|209541257|gb|ACI61833.1| Putative type I site-specific deoxyribonuclease [Streptococcus pyogenes NZ131] Length = 526 Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust. Identities = 24/90 (26%), Positives = 42/90 (46%), Gaps = 9/90 (10%) Query: 94 EKRDVVRILDLGTGTGAVCLALLK---ESPFFKGVGVDISCKALEIAKSNAVTNGVS--- 147 E + + + D G+G++ L K +S G +I+ +A+ N + +GV+ Sbjct: 215 EDQKGMTLYDPAMGSGSLLLNAKKYSNQSDTVSYYGQEINTSTYNLARMNMMLHGVAIEN 274 Query: 148 ---ERFDTLQSDWFSSVEGLFDVIVSNPPY 174 DTL +DW + FD ++ NPPY Sbjct: 275 QHLSNADTLDADWPTDEPTNFDGVLMNPPY 304 >gi|325117932|emb|CBZ53483.1| hypothetical protein NCLIV_032700 [Neospora caninum Liverpool] Length = 560 Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust. Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 7/87 (8%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE----RFDTLQ 154 +++LD+G G V L + VG DIS ++LE+A+ N NG+ R Sbjct: 305 IKVLDIGVGANCVYPLLGCAEYGWTFVGSDISKRSLELARENVNLNGLGSCVHLRHQQDP 364 Query: 155 SDWFSSV---EGLFDVIVSNPPYIESV 178 +FS V +F + + NPP+ ES Sbjct: 365 VKFFSGVVENGEMFALSMCNPPFHEST 391 >gi|256830634|ref|YP_003159362.1| ribosomal L11 methyltransferase [Desulfomicrobium baculatum DSM 4028] gi|256579810|gb|ACU90946.1| ribosomal L11 methyltransferase [Desulfomicrobium baculatum DSM 4028] Length = 284 Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust. Identities = 38/131 (29%), Positives = 61/131 (46%), Gaps = 11/131 (8%) Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 LDLGTG+G + +A +K G G+DI A++ A NA N V++ F + + Sbjct: 153 LDLGTGSGILGIAAVKLG--LVGQGLDIDPVAVDNAHENAALNAVTDAFRPATGS-VTDI 209 Query: 162 --EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 E FD I++N + + ++D D R+S G + R AD V + Sbjct: 210 PREQHFDCILAN--ILANPLIDM----AEDICARLSRPGVLILSGILREQADRVVQAYTL 263 Query: 220 DGLCSVEIGYN 230 GL + +I Y+ Sbjct: 264 QGLAAPQIAYS 274 >gi|254409490|ref|ZP_05023271.1| Methyltransferase domain family [Microcoleus chthonoplastes PCC 7420] gi|196183487|gb|EDX78470.1| Methyltransferase domain family [Microcoleus chthonoplastes PCC 7420] Length = 223 Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust. Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 7/79 (8%) Query: 96 RDVVRILDLGTGTGAVCLALLK-ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154 + V RILDLGTG G + LALLK + P+ + + +D S L+ AK + E + Sbjct: 46 KTVKRILDLGTGDGRL-LALLKIDRPYVESIAIDFSPTMLDAAKQRFAGD---ETVKIIA 101 Query: 155 SDWFSSVE--GLFDVIVSN 171 D + G+FD IVS+ Sbjct: 102 HDLDHPLPELGIFDAIVSS 120 >gi|254414464|ref|ZP_05028230.1| Methyltransferase domain family [Microcoleus chthonoplastes PCC 7420] gi|196178694|gb|EDX73692.1| Methyltransferase domain family [Microcoleus chthonoplastes PCC 7420] Length = 264 Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust. Identities = 32/123 (26%), Positives = 51/123 (41%), Gaps = 17/123 (13%) Query: 76 PETELLVDSALAFSLPRIEKR-----------DVVRILDLGTGTGAVCLALLKESPFFKG 124 P + D+ A++ P E R RILDLG GTG+ L L + P Sbjct: 55 PIAAITYDTVTAYASPPNETRIREQLITTIENQPSRILDLGCGTGSTTLMLKQAFPEAVV 114 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIV------SNPPYIESV 178 +G+D+S L +A A G+ ++ ++ + FD++ PP I + Sbjct: 115 IGLDLSPYMLIVADYKAEQAGLDIQWQHGLAEAAGFDDASFDLVTVSMVLHETPPQISQL 174 Query: 179 IVD 181 IV Sbjct: 175 IVQ 177 >gi|171057155|ref|YP_001789504.1| cyclopropane-fatty-acyl-phospholipid synthase [Leptothrix cholodnii SP-6] gi|170774600|gb|ACB32739.1| Cyclopropane-fatty-acyl-phospholipid synthase [Leptothrix cholodnii SP-6] Length = 421 Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust. Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 18/93 (19%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGV---GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 R+L++G G GAV ++ +E +G GV +S + L+ A+ G++ER D D Sbjct: 207 RVLEIGCGWGAVAESVARE----RGAHLTGVTLSTEQLDYARQRLADAGLAERADLRLQD 262 Query: 157 WFSSVEGLFDVIVS-----------NPPYIESV 178 + + FD ++S P Y E+V Sbjct: 263 YRDIADAPFDAVISIEMFEAVGRSYWPSYFETV 295 >gi|134101248|ref|YP_001106909.1| SAM-dependent methyltransferase [Saccharopolyspora erythraea NRRL 2338] gi|291007762|ref|ZP_06565735.1| SAM-dependent methyltransferase [Saccharopolyspora erythraea NRRL 2338] gi|133913871|emb|CAM03984.1| SAM-dependent methyltransferase [Saccharopolyspora erythraea NRRL 2338] Length = 348 Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust. Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 14/99 (14%) Query: 90 LPRIEKRDV-----VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN 144 +P +E D R+ DLG G G+ + + + P VG D +++E+A+ A Sbjct: 156 IPALEGVDAKLTAGARVADLGCGLGSTSVLIAQAYPRTTVVGSDYHAESIELARKQAARA 215 Query: 145 GVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183 GV++R S S G FD++ + DCL Sbjct: 216 GVTDRVTFEVSTAQSFTGGDFDLV---------TMFDCL 245 >gi|146313175|ref|YP_001178249.1| rRNA (guanine-N(2)-)-methyltransferase [Enterobacter sp. 638] gi|229564328|sp|A4WER8|RLMG_ENT38 RecName: Full=Ribosomal RNA large subunit methyltransferase G; AltName: Full=23S rRNA m2G1835 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rlmG gi|145320051|gb|ABP62198.1| 23S rRNA m(2)G-1835 methyltransferase / 16S rRNA m(2)G 1207 methyltransferase [Enterobacter sp. 638] Length = 378 Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust. Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 3/78 (3%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS--ERFDTLQSDW 157 I+DLG G G V L LL+++P + D S A+ ++ N TN +R + + ++ Sbjct: 231 EIVDLGCGNGVVGLTLLEKNPEASVLFTDESPMAVASSRLNVETNMPEALDRCEFMINNA 290 Query: 158 FSSVEGL-FDVIVSNPPY 174 S VE F+ ++ NPP+ Sbjct: 291 LSGVEPFRFNAVLCNPPF 308 >gi|61162125|dbj|BAD91052.1| Fc1-cadherin [Folsomia candida] Length = 1565 Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust. Identities = 31/97 (31%), Positives = 47/97 (48%), Gaps = 17/97 (17%) Query: 152 TLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS-----HY 206 +LQ ++ +S GL I N P +S + D + LE+RD P + +D G G+S H Sbjct: 1196 SLQVEFMASKSGL---IFYNGPIYQSSVTDFMSLELRDGKPMLLMDYGT-GVSRLEIEHS 1251 Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 +ADG+S V I +N +R+ E RK Sbjct: 1252 PMLADGLSH--------KVHITWNPSAISMRVDECRK 1280 >gi|9955209|pdb|1DUS|A Chain A, Mj0882-A Hypothetical Protein From M. Jannaschii Length = 194 Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust. Identities = 25/76 (32%), Positives = 43/76 (56%), Gaps = 6/76 (7%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD--TLQSDWF 158 ILDLG G G + +AL E DI+ +A+++AK N N + + +D + SD + Sbjct: 56 ILDLGCGYGVIGIALADEVKST--TXADINRRAIKLAKENIKLNNL-DNYDIRVVHSDLY 112 Query: 159 SSVEG-LFDVIVSNPP 173 +V+ ++ I++NPP Sbjct: 113 ENVKDRKYNKIITNPP 128 >gi|327458795|gb|EGF05143.1| ribosomal RNA small subunit methyltransferase D [Streptococcus sanguinis SK1057] Length = 182 Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust. Identities = 33/131 (25%), Positives = 57/131 (43%), Gaps = 16/131 (12%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+LD G+G + + + + V V+ +A I N ERFD L+ + Sbjct: 47 RVLDFYAGSGGLAIEAISRG-MEEAVLVEKDRRAQAIISENIQMTKEPERFDLLKMESGR 105 Query: 160 SVE---GLFDVIVSNPPYI-ESVIVDCLGLEVRDF-----------DPRISLDGGIDGLS 204 ++E G FD+++ +PPY E ++ D LE R + + L I GL Sbjct: 106 ALEMLTGSFDLVLLDPPYAKEQIVEDLEKLEERQLLGQDVLVVCETEKEVELPEEIAGLG 165 Query: 205 HYRTIADGVSR 215 ++ G+S+ Sbjct: 166 IWKQKIYGISK 176 >gi|319405993|emb|CBI79625.1| ribosomal protein L11 methyltransferase [Bartonella sp. AR 15-3] Length = 289 Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust. Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 11/86 (12%) Query: 93 IEKRDVVRILDLGTGTG--AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150 I+ + LDLGTG+G A+ + +LK P DI A+++AK N NGV+E Sbjct: 146 IQDENPQNALDLGTGSGVLAIGIVMLKPIPVL---AADIDPIAVQVAKHNIRFNGVTEHV 202 Query: 151 DTL-----QSDWFSSVEGLFDVIVSN 171 + + D +S FD+IV+N Sbjct: 203 TAVTITDFRDDKVASC-APFDLIVAN 227 >gi|308389961|gb|ADO32281.1| putative ribosomal protein L11 methyltransferase [Neisseria meningitidis alpha710] Length = 330 Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust. Identities = 27/74 (36%), Positives = 38/74 (51%), Gaps = 11/74 (14%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDW 157 +LD G G+G + +A LK VGVDI +A+ + NA N V +F D L Sbjct: 202 VLDYGCGSGILTIAALKLG-AGSAVGVDIDEQAVRAGRDNAEQNNVDAQFFLPDGLP--- 257 Query: 158 FSSVEGLFDVIVSN 171 +G FDV+V+N Sbjct: 258 ----QGQFDVVVAN 267 >gi|298370003|ref|ZP_06981319.1| ribosomal protein L11 methyltransferase [Neisseria sp. oral taxon 014 str. F0314] gi|298281463|gb|EFI22952.1| ribosomal protein L11 methyltransferase [Neisseria sp. oral taxon 014 str. F0314] Length = 295 Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust. Identities = 27/74 (36%), Positives = 37/74 (50%), Gaps = 11/74 (14%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDW 157 +LD G G+G + +A LK VGVDI +A+ + NA N V F D L Sbjct: 167 VLDYGCGSGILTIAALKLGA-GSAVGVDIDEQAIRASNDNAAQNDVQAHFYLPDGL---- 221 Query: 158 FSSVEGLFDVIVSN 171 +G FDV+V+N Sbjct: 222 ---PQGQFDVVVAN 232 >gi|256822115|ref|YP_003146078.1| ubiquinone biosynthesis O-methyltransferase [Kangiella koreensis DSM 16069] gi|256795654|gb|ACV26310.1| ubiquinone biosynthesis O-methyltransferase [Kangiella koreensis DSM 16069] Length = 239 Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust. Identities = 25/92 (27%), Positives = 47/92 (51%), Gaps = 8/92 (8%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LD+G G G + A+ KE + G+D+ LE+AK + + +G+ + + ++ F+ Sbjct: 58 KVLDIGCGGGILTEAMAKEGA--QATGIDMGDMPLEVAKLHMLESGLDIDYQKITAEEFA 115 Query: 160 SVE-GLFDVI-----VSNPPYIESVIVDCLGL 185 G FDV+ + + P S+I C L Sbjct: 116 EQHAGQFDVVTCLEMLEHVPDPSSIIKACRKL 147 >gi|225011827|ref|ZP_03702265.1| RNA methyltransferase, TrmA family [Flavobacteria bacterium MS024-2A] gi|225004330|gb|EEG42302.1| RNA methyltransferase, TrmA family [Flavobacteria bacterium MS024-2A] Length = 471 Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust. Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 10/80 (12%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG-------VSERFDTL 153 + DL TGTG + L+L K+ K +GV+ +A+E A NA N V + D Sbjct: 325 VYDLYTGTGTIALSLAKQCA--KIIGVESVPEAIEAANENATFNKIKNATFEVGDMKDCF 382 Query: 154 QSDWFSSVEGLFDVIVSNPP 173 D F G +V++++PP Sbjct: 383 NDD-FIKRHGKAEVVITDPP 401 >gi|20429104|emb|CAD24416.1| hypothetical protein [Paracoccus zeaxanthinifaciens] Length = 246 Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust. Identities = 24/78 (30%), Positives = 33/78 (42%), Gaps = 6/78 (7%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +L+LG G G L L P + G++ +A NA G+ D L D Sbjct: 44 VLELGCGAGVASLCLAARVPGLRCTGLERQADYAALALRNAQECGLP--LDVLTGDLSDP 101 Query: 161 VEGL----FDVIVSNPPY 174 GL FD ++ NPPY Sbjct: 102 PAGLRGRGFDHVIMNPPY 119 >gi|15645091|ref|NP_207261.1| type I restriction enzyme M protein (hsdM) [Helicobacter pylori 26695] gi|2313567|gb|AAD07525.1| type I restriction enzyme M protein (hsdM) [Helicobacter pylori 26695] Length = 487 Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust. Identities = 28/91 (30%), Positives = 43/91 (47%), Gaps = 21/91 (23%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVD--------ISCKALEIAKSNAVTNGVSERF 150 V+I D GTG + +AL + +G D IS K+L + K N + N ++ Sbjct: 231 VKIYDPSAGTGTLLMALAHQ------IGTDSCTLYAQDISQKSLRMLKLNLILNDLTHSL 284 Query: 151 ------DTLQSDWFSS-VEGLFDVIVSNPPY 174 +TL + + S +G D IVSNPP+ Sbjct: 285 RNAIEGNTLTNPYHSKDFKGKMDYIVSNPPF 315 >gi|317009085|gb|ADU79665.1| type I restriction enzyme M protein [Helicobacter pylori India7] Length = 544 Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust. Identities = 28/91 (30%), Positives = 43/91 (47%), Gaps = 21/91 (23%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVD--------ISCKALEIAKSNAVTNGVSERF 150 V+I D GTG + +AL + +G D IS K+L + K N + N ++ Sbjct: 231 VKIYDPSAGTGTLLMALAHQ------IGTDSCTLYAQDISQKSLRMLKLNLILNDLTHSL 284 Query: 151 ------DTLQSDWFSS-VEGLFDVIVSNPPY 174 +TL + + S +G D IVSNPP+ Sbjct: 285 KNAIEGNTLTNPYHSKDFKGKMDYIVSNPPF 315 >gi|229819569|ref|YP_002881095.1| Methyltransferase type 12 [Beutenbergia cavernae DSM 12333] gi|229565482|gb|ACQ79333.1| Methyltransferase type 12 [Beutenbergia cavernae DSM 12333] Length = 257 Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust. Identities = 16/69 (23%), Positives = 36/69 (52%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 ++D+G G G + L L +P +G+G+D+ +A+ + A G+++R + + D Sbjct: 41 VVDIGCGWGELLLRTLAAAPTARGLGLDLDAEAVAHGTATAAARGLADRVELVAGDAKEH 100 Query: 161 VEGLFDVIV 169 + D ++ Sbjct: 101 LPDAVDAVI 109 >gi|126663522|ref|ZP_01734519.1| putative SAM-dependent methyltransferase [Flavobacteria bacterium BAL38] gi|126624470|gb|EAZ95161.1| putative SAM-dependent methyltransferase [Flavobacteria bacterium BAL38] Length = 302 Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust. Identities = 25/93 (26%), Positives = 45/93 (48%), Gaps = 8/93 (8%) Query: 93 IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN-----GVS 147 I+ + +RILD+G G + + ++ VG +I +A E A+ N +N V+ Sbjct: 103 IQTKHKIRILDVGIGANCIYPIIGVSEYDWRFVGSEIDKQAFEAAQENINSNQKLKENVA 162 Query: 148 ERFDTLQSDWFSSV---EGLFDVIVSNPPYIES 177 R + + F ++ E FD+ + NPP+ S Sbjct: 163 LRLQNSKRNIFKNIILPEDKFDMTICNPPFHSS 195 >gi|146299059|ref|YP_001193650.1| methyltransferase small [Flavobacterium johnsoniae UW101] gi|262828313|sp|A5FKD7|TRMN6_FLAJ1 RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName: Full=tRNA m6A37 methyltransferase gi|146153477|gb|ABQ04331.1| methyltransferase small [Flavobacterium johnsoniae UW101] Length = 235 Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust. Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 3/77 (3%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER---FDTLQSDW 157 ILD+G GTG + L L + + + ++I A E A N + +R F ++ Sbjct: 38 ILDIGAGTGIIALMLAQRTHAEQIDALEIDEDAYEQAVENFEASPWGDRLFCFHAGLDEF 97 Query: 158 FSSVEGLFDVIVSNPPY 174 E +D+IVSNPP+ Sbjct: 98 IEEPEDEYDLIVSNPPF 114 >gi|332711922|ref|ZP_08431852.1| methylase involved in ubiquinone/menaquinone biosynthesis [Lyngbya majuscula 3L] gi|332349250|gb|EGJ28860.1| methylase involved in ubiquinone/menaquinone biosynthesis [Lyngbya majuscula 3L] Length = 241 Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust. Identities = 32/127 (25%), Positives = 55/127 (43%), Gaps = 14/127 (11%) Query: 97 DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 D ++L+LG GTG + ++ P + G+D + LEIAK + + +++D Sbjct: 36 DGRQVLELGVGTGLLAQKYIELDPTCEFTGIDFTASMLEIAKQR-----LGNQVKLIEAD 90 Query: 157 WFS-SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215 + + FDV +SN G+ + + G + GL R V+R Sbjct: 91 AVTMDLNAKFDVGISNG--------GVWGILDQGDQAQWQFGGHVPGLEANRQGLANVAR 142 Query: 216 HLNKDGL 222 HL + GL Sbjct: 143 HLKEGGL 149 >gi|330964993|gb|EGH65253.1| ribosomal RNA small subunit methyltransferase C [Pseudomonas syringae pv. actinidiae str. M302091] Length = 332 Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust. Identities = 27/105 (25%), Positives = 44/105 (41%), Gaps = 2/105 (1%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 +D A L I+K +LD G G G + A+ + P V +D+ A ++ Sbjct: 176 LDRGSALLLENIDKLPSGNLLDFGCGAGVLGAAVKRRYPHNDVVMLDVDAFATASSRLTL 235 Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLE 186 NG+ + L D + + I+SNPP+ V D + E Sbjct: 236 AANGLEAQ--VLTGDGIDAAPMGLNTILSNPPFHVGVHTDYMATE 278 >gi|254719941|ref|ZP_05181752.1| methyltransferase [Brucella sp. 83/13] Length = 187 Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust. Identities = 39/130 (30%), Positives = 61/130 (46%), Gaps = 14/130 (10%) Query: 53 RILGWRDFYNVRLTLSSDTFEPRPETELLVDS---ALAFSLPRIEKRDVVRILDLGTGTG 109 RI+G + + R ++ T RP T+ +S LA S P +K + VR+LDL GTG Sbjct: 2 RIVGGK--FRGRALVTPSTNAIRPTTDRTRESLFNILAHSFP--DKVEGVRVLDLFAGTG 57 Query: 110 AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-----RFDTLQSDWFSSVEGL 164 A+ L L + V+ S + I + N G+ R D Q ++E Sbjct: 58 ALGLEALSRGARYATF-VEESAEGRGILRQNIEALGLQGHTKILRRDACQLGIVGTME-P 115 Query: 165 FDVIVSNPPY 174 FD++ ++PPY Sbjct: 116 FDLVFADPPY 125 >gi|171058002|ref|YP_001790351.1| O-methyltransferase family protein [Leptothrix cholodnii SP-6] gi|170775447|gb|ACB33586.1| O-methyltransferase family 2 [Leptothrix cholodnii SP-6] Length = 363 Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust. Identities = 26/88 (29%), Positives = 47/88 (53%), Gaps = 6/88 (6%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 VD A + +LP D ++DLG G G + +L+ P +GV D+ A++ A+++ Sbjct: 169 VDLARSPALP-----DAGVVIDLGGGHGELLAEVLRARPGLRGVLFDLD-HAVDGAQAHL 222 Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIV 169 GV+ER D+F+++ DV++ Sbjct: 223 REAGVAERVTVTSGDFFAALPRPVDVVL 250 >gi|89890519|ref|ZP_01202029.1| RNA methyltransferase [Flavobacteria bacterium BBFL7] gi|89517434|gb|EAS20091.1| RNA methyltransferase [Flavobacteria bacterium BBFL7] Length = 485 Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust. Identities = 32/105 (30%), Positives = 51/105 (48%), Gaps = 17/105 (16%) Query: 82 VDSALAFSLPRIEKRDVVR------ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135 +S AF L +I RD + DL TGTG + + K++ VG++ A+E Sbjct: 317 TNSKQAFELYKI-TRDFAGLTGEELVYDLYTGTGTIAQFVAKKANHV--VGIESVPVAIE 373 Query: 136 IAKSNAVTNGV-------SERFDTLQSDWFSSVEGLFDVIVSNPP 173 AK+NA NG+ + D +D F + G DV++++PP Sbjct: 374 DAKANAAHNGIDNTTFFAGDMRDVFTAD-FIAEHGAPDVVITDPP 417 >gi|327190724|gb|EGE57805.1| cyclopropane-fatty-acyl-phospholipid synthase protein [Rhizobium etli CNPAF512] Length = 419 Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust. Identities = 21/71 (29%), Positives = 39/71 (54%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 RIL++G+G G + + L + + G+ +S + L+++++ A G+SER D+ + Sbjct: 176 RILEIGSGWGGMGMYLAEATEGADFTGITLSEEQLKVSRTRAEKRGLSERVRFELQDYRT 235 Query: 160 SVEGLFDVIVS 170 FD IVS Sbjct: 236 MTGRKFDRIVS 246 >gi|260771831|ref|ZP_05880749.1| ribosomal RNA small subunit methyltransferase C [Vibrio metschnikovii CIP 69.14] gi|260613123|gb|EEX38324.1| ribosomal RNA small subunit methyltransferase C [Vibrio metschnikovii CIP 69.14] Length = 340 Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust. Identities = 27/97 (27%), Positives = 48/97 (49%), Gaps = 11/97 (11%) Query: 78 TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137 ++LL+DS LP ++ + +LD G G G + + +P + DIS A+ + Sbjct: 190 SQLLLDS-----LPSLQGK----VLDFGCGAGVLGCVMSILNPEIQLEMCDISALAIYSS 240 Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174 ++ NG++ R SD +S + IV+NPP+ Sbjct: 241 QATLAANGLTGR--VFASDVYSDTGQDYQSIVTNPPF 275 >gi|240277076|gb|EER40586.1| conserved hypothetical protein [Ajellomyces capsulatus H143] Length = 454 Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust. Identities = 55/220 (25%), Positives = 82/220 (37%), Gaps = 63/220 (28%) Query: 38 LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETE---LLVDSALAFSLPRIE 94 L + R + + ILG + F + + PRPETE V + L L Sbjct: 88 LREMVRRRARGVPLQYILGDQPFGELEMLCRRGVLIPRPETESYTTRVANLLLSKLAPTR 147 Query: 95 KRDV-------------VRILDLGTGTGAVCLALLKES----PFFKGVGVDISCKALEIA 137 ++D+ +RI+DL TGTG + L L P + VDIS +AL++A Sbjct: 148 QKDLTHRDECKCEHLPTLRIVDLCTGTGCIPLLLHSLLSPVFPKLQICAVDISTRALKLA 207 Query: 138 KSNAVTN----GVSERF---------DTLQSDWFSSVEGL-------------------- 164 + N N +SER D L S + GL Sbjct: 208 RENLKHNIALGMLSERAREEVSFVKGDVLSG--LSELSGLCSSSVTPASKTAAAAAAAAE 265 Query: 165 ------FDVIVSNPPYIESV--IVDCLGLEVRDFDPRISL 196 +++SNPPYI VR ++PR++L Sbjct: 266 PEINPVITILLSNPPYISPAQFANGTTARSVRRYEPRLAL 305 >gi|271963286|ref|YP_003337482.1| hypothetical protein Sros_1748 [Streptosporangium roseum DSM 43021] gi|270506461|gb|ACZ84739.1| hypothetical protein Sros_1748 [Streptosporangium roseum DSM 43021] Length = 247 Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust. Identities = 43/140 (30%), Positives = 54/140 (38%), Gaps = 25/140 (17%) Query: 90 LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 L R + RILDLG G L L+ P GVDIS AL A+ A G+S+R Sbjct: 29 LTRAKLAPGARILDLGCGEAPWVLRALELHPEAVADGVDISEHALTAAQKAADQRGLSDR 88 Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209 GL V + D G E D + DGL+ T+ Sbjct: 89 L------------GLHHVPAA----------DFTGTEPYDLVLCVGSTHAFDGLT--ATM 124 Query: 210 ADGVSRHLNKDGLCSVEIGY 229 D + RHL GL V G+ Sbjct: 125 QD-IRRHLRPGGLALVGEGF 143 >gi|229008418|ref|ZP_04165879.1| Methyltransferase type 11 [Bacillus mycoides Rock1-4] gi|228752855|gb|EEM02423.1| Methyltransferase type 11 [Bacillus mycoides Rock1-4] Length = 211 Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust. Identities = 29/80 (36%), Positives = 43/80 (53%), Gaps = 12/80 (15%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKS----NAVTNGVSERFDTLQS 155 +ILD+GTG+G++ + L K P G+D E +K+ NA GVS+R D L++ Sbjct: 40 KILDIGTGSGSLIIKLAKTFPKPFLTGIDYWGGNWEYSKAQCQQNAEIEGVSDRVDFLKA 99 Query: 156 DWFSSVE-----GLFDVIVS 170 S+ E FD+IVS Sbjct: 100 ---SAAELPFNDDEFDIIVS 116 >gi|255659201|ref|ZP_05404610.1| ribosomal protein L11 methyltransferase [Mitsuokella multacida DSM 20544] gi|260848653|gb|EEX68660.1| ribosomal protein L11 methyltransferase [Mitsuokella multacida DSM 20544] Length = 314 Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust. Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 1/73 (1%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 +R+ D+GTG+G + +A K + V +D A +A+ N N V +R T SD Sbjct: 176 MRVFDVGTGSGVLAVAAAKLGA-GEVVAMDYDRTAATVAQENVERNHVEDRVTTGVSDLL 234 Query: 159 SSVEGLFDVIVSN 171 + G D+I++N Sbjct: 235 KAFTGKADLIIAN 247 >gi|189466913|ref|ZP_03015698.1| hypothetical protein BACINT_03295 [Bacteroides intestinalis DSM 17393] gi|212694247|ref|ZP_03302375.1| hypothetical protein BACDOR_03773 [Bacteroides dorei DSM 17855] gi|255690867|ref|ZP_05414542.1| methyltransferase, UbiE/COQ5 family [Bacteroides finegoldii DSM 17565] gi|189435177|gb|EDV04162.1| hypothetical protein BACINT_03295 [Bacteroides intestinalis DSM 17393] gi|212662748|gb|EEB23322.1| hypothetical protein BACDOR_03773 [Bacteroides dorei DSM 17855] gi|260623501|gb|EEX46372.1| methyltransferase, UbiE/COQ5 family [Bacteroides finegoldii DSM 17565] Length = 246 Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust. Identities = 28/72 (38%), Positives = 37/72 (51%), Gaps = 3/72 (4%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+LDLG G G C+ + E VGVDIS K LE+AK V + ++ F Sbjct: 45 RVLDLGCGYGWHCIYAM-EHGASSVVGVDISHKMLEVAKEKTHFPQVEYKCCAIEDVEFP 103 Query: 160 SVEGLFDVIVSN 171 E FDVI+S+ Sbjct: 104 --EESFDVILSS 113 >gi|84393814|ref|ZP_00992560.1| 16S RNA G1207 methylase RsmC [Vibrio splendidus 12B01] gi|84375554|gb|EAP92455.1| 16S RNA G1207 methylase RsmC [Vibrio splendidus 12B01] Length = 340 Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust. Identities = 31/128 (24%), Positives = 56/128 (43%), Gaps = 21/128 (16%) Query: 57 WRDFYNVRLTLSSDTFEPRPE----------TELLVDSALAFSLPRIEKRDVVRILDLGT 106 W Y V + S T + P ++LL+D+ LP+++ + +LD G Sbjct: 159 WFKTYTVNIDEQSLTVKSLPGVFSHGQFDVGSQLLLDT-----LPKLKGK----VLDFGC 209 Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFD 166 G G + + P + DIS A+ +++ NG++ + SD +S + Sbjct: 210 GAGVLGAVMASRHPDIELEMCDISAFAVASSQATLEANGLTG--NVFASDVYSDTSKDYQ 267 Query: 167 VIVSNPPY 174 I+SNPP+ Sbjct: 268 FIISNPPF 275 >gi|329889421|ref|ZP_08267764.1| methyltransferase small domain protein [Brevundimonas diminuta ATCC 11568] gi|328844722|gb|EGF94286.1| methyltransferase small domain protein [Brevundimonas diminuta ATCC 11568] Length = 242 Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust. Identities = 25/88 (28%), Positives = 39/88 (44%), Gaps = 4/88 (4%) Query: 93 IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152 +E R R+++ G G GAV + + P G++ A +A+ NA N R Sbjct: 33 VEARPGERLIEAGCGAGAVLMQIAARRPGVLLTGLERDAAAAALARQNAELNNAEARTTI 92 Query: 153 LQSDWFSSVEGL----FDVIVSNPPYIE 176 ++ D L FD VSNPP+ + Sbjct: 93 VEGDVARGFRALDLSPFDWAVSNPPFFD 120 >gi|310818989|ref|YP_003951347.1| ribosomal protein L11 methyltransferase [Stigmatella aurantiaca DW4/3-1] gi|309392061|gb|ADO69520.1| Ribosomal protein L11 methyltransferase [Stigmatella aurantiaca DW4/3-1] Length = 288 Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust. Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 3/71 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LD+GTGTG + +A K + VG D ++E+A NA N + L Sbjct: 160 VLDVGTGTGVLAIAAKKLG-AGRVVGTDNDPTSVELAHENAAVNDTPDV--ELSGKGLEQ 216 Query: 161 VEGLFDVIVSN 171 V G FD++V+N Sbjct: 217 VPGTFDLVVAN 227 >gi|257482047|ref|ZP_05636088.1| ribosomal RNA small subunit methyltransferase C [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 308 Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust. Identities = 26/105 (24%), Positives = 44/105 (41%), Gaps = 2/105 (1%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 +D A L I+K +LD G G G + A+ + P + +D+ A ++ Sbjct: 152 LDRGSALLLENIDKLPSGNLLDFGCGAGVLGAAVKRRYPHNDVIMLDVDAFATASSRLTL 211 Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLE 186 NG+ + L D + + I+SNPP+ V D + E Sbjct: 212 AANGLQAQ--VLTGDGIDAAPMGLNTILSNPPFHVGVHTDYMATE 254 >gi|71904274|ref|YP_281077.1| type I restriction-modification system methylation subunit [Streptococcus pyogenes MGAS6180] gi|306826650|ref|ZP_07459954.1| type I restriction-modification system DNA-methyltransferase [Streptococcus pyogenes ATCC 10782] gi|71803369|gb|AAX72722.1| type I restriction-modification system methylation subunit [Streptococcus pyogenes MGAS6180] gi|304431177|gb|EFM34182.1| type I restriction-modification system DNA-methyltransferase [Streptococcus pyogenes ATCC 10782] Length = 526 Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust. Identities = 24/90 (26%), Positives = 42/90 (46%), Gaps = 9/90 (10%) Query: 94 EKRDVVRILDLGTGTGAVCLALLK---ESPFFKGVGVDISCKALEIAKSNAVTNGVS--- 147 E + + + D G+G++ L K +S G +I+ +A+ N + +GV+ Sbjct: 215 EDQKGMTLYDPAMGSGSLLLNAKKYSNQSDTVSYYGQEINTSTYNLARMNMMLHGVAIEN 274 Query: 148 ---ERFDTLQSDWFSSVEGLFDVIVSNPPY 174 DTL +DW + FD ++ NPPY Sbjct: 275 QHLSNADTLDADWPTDEPTNFDGVLMNPPY 304 >gi|23499967|ref|NP_699407.1| hypothetical protein BRA0207 [Brucella suis 1330] gi|62317154|ref|YP_223007.1| hypothetical protein BruAb2_0202 [Brucella abortus bv. 1 str. 9-941] gi|83269137|ref|YP_418428.1| N-6 adenine-specific DNA methylase [Brucella melitensis biovar Abortus 2308] gi|148558154|ref|YP_001257254.1| hypothetical protein BOV_A0186 [Brucella ovis ATCC 25840] gi|161620285|ref|YP_001594171.1| methyltransferase [Brucella canis ATCC 23365] gi|189022413|ref|YP_001932154.1| conserved hypothetical protein TIGR00095 [Brucella abortus S19] gi|254691363|ref|ZP_05154617.1| methyltransferase [Brucella abortus bv. 6 str. 870] gi|254698433|ref|ZP_05160261.1| methyltransferase [Brucella abortus bv. 2 str. 86/8/59] gi|254702621|ref|ZP_05164449.1| methyltransferase [Brucella suis bv. 3 str. 686] gi|254706248|ref|ZP_05168076.1| methyltransferase [Brucella pinnipedialis M163/99/10] gi|254711458|ref|ZP_05173269.1| methyltransferase [Brucella pinnipedialis B2/94] gi|254712061|ref|ZP_05173872.1| methyltransferase [Brucella ceti M644/93/1] gi|254715131|ref|ZP_05176942.1| methyltransferase [Brucella ceti M13/05/1] gi|254731880|ref|ZP_05190458.1| methyltransferase [Brucella abortus bv. 4 str. 292] gi|256014992|ref|YP_003105001.1| methyltransferase [Brucella microti CCM 4915] gi|256029911|ref|ZP_05443525.1| methyltransferase [Brucella pinnipedialis M292/94/1] gi|256059560|ref|ZP_05449759.1| methyltransferase [Brucella neotomae 5K33] gi|256158080|ref|ZP_05455998.1| methyltransferase [Brucella ceti M490/95/1] gi|256252965|ref|ZP_05458501.1| methyltransferase [Brucella ceti B1/94] gi|256256548|ref|ZP_05462084.1| methyltransferase [Brucella abortus bv. 9 str. C68] gi|260166987|ref|ZP_05753798.1| methyltransferase [Brucella sp. F5/99] gi|260568471|ref|ZP_05838940.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40] gi|260756975|ref|ZP_05869323.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870] gi|260762894|ref|ZP_05875226.1| conserved hypothetical protein [Brucella abortus bv. 2 str. 86/8/59] gi|260882786|ref|ZP_05894400.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68] gi|261220058|ref|ZP_05934339.1| conserved hypothetical protein [Brucella ceti B1/94] gi|261313692|ref|ZP_05952889.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10] gi|261323528|ref|ZP_05962725.1| conserved hypothetical protein [Brucella neotomae 5K33] gi|265986929|ref|ZP_06099486.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1] gi|265996595|ref|ZP_06109152.1| conserved hypothetical protein [Brucella ceti M490/95/1] gi|23463548|gb|AAN33412.1| conserved hypothetical protein TIGR00095 [Brucella suis 1330] gi|62197347|gb|AAX75646.1| conserved hypothetical protein TIGR00095 [Brucella abortus bv. 1 str. 9-941] gi|82939411|emb|CAJ12365.1| N-6 Adenine-specific DNA methylase:N6 adenine-specific DNA methyltransferase, N12 class:Conserved hypothetical protein 95 [Brucella melitensis biovar Abortus 2308] gi|148369439|gb|ABQ62311.1| conserved hypothetical protein TIGR00095 [Brucella ovis ATCC 25840] gi|161337096|gb|ABX63400.1| methyltransferase [Brucella canis ATCC 23365] gi|189020987|gb|ACD73708.1| conserved hypothetical protein TIGR00095 [Brucella abortus S19] gi|255997652|gb|ACU49339.1| methyltransferase [Brucella microti CCM 4915] gi|260155136|gb|EEW90217.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40] gi|260673315|gb|EEX60136.1| conserved hypothetical protein [Brucella abortus bv. 2 str. 86/8/59] gi|260677083|gb|EEX63904.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870] gi|260872314|gb|EEX79383.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68] gi|260918642|gb|EEX85295.1| conserved hypothetical protein [Brucella ceti B1/94] gi|261299508|gb|EEY03005.1| conserved hypothetical protein [Brucella neotomae 5K33] gi|261302718|gb|EEY06215.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10] gi|262550892|gb|EEZ07053.1| conserved hypothetical protein [Brucella ceti M490/95/1] gi|264659126|gb|EEZ29387.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1] Length = 187 Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust. Identities = 39/130 (30%), Positives = 61/130 (46%), Gaps = 14/130 (10%) Query: 53 RILGWRDFYNVRLTLSSDTFEPRPETELLVDS---ALAFSLPRIEKRDVVRILDLGTGTG 109 RI+G + + R ++ T RP T+ +S LA S P +K + VR+LDL GTG Sbjct: 2 RIVGGK--FRGRALVTPSTNAIRPTTDRTRESLFNILAHSFP--DKVEGVRVLDLFAGTG 57 Query: 110 AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-----RFDTLQSDWFSSVEGL 164 A+ L L + V+ S + I + N G+ R D Q ++E Sbjct: 58 ALGLEALSRGARYATF-VEESAEGRGILRQNIEALGLQGHTKILRRDACQLGIVGTME-P 115 Query: 165 FDVIVSNPPY 174 FD++ ++PPY Sbjct: 116 FDLVFADPPY 125 >gi|330873247|gb|EGH07396.1| ribosomal RNA small subunit methyltransferase C [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 332 Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust. Identities = 27/105 (25%), Positives = 44/105 (41%), Gaps = 2/105 (1%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 +D A L I+K +LD G G G + A+ + P V +D+ A ++ Sbjct: 176 LDRGSALLLENIDKLPSGNLLDFGCGAGVLGAAVKRRYPHNDVVMLDVDAFATASSRLTL 235 Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLE 186 NG+ + L D + + I+SNPP+ V D + E Sbjct: 236 AANGLEAQ--VLTGDGIDAAPMGLNTILSNPPFHVGVHTDYMATE 278 >gi|260774377|ref|ZP_05883291.1| ribosomal protein L11 methyltransferase [Vibrio metschnikovii CIP 69.14] gi|260610504|gb|EEX35709.1| ribosomal protein L11 methyltransferase [Vibrio metschnikovii CIP 69.14] Length = 295 Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust. Identities = 23/72 (31%), Positives = 42/72 (58%), Gaps = 4/72 (5%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 ++D G G+G + +A +K K +G+DI +AL+ ++ NA NGV+++ + + Sbjct: 163 VIDFGCGSGILAIAAIKLG-AAKVIGIDIDPQALQASRDNAERNGVADKIEVYLPQ--NQ 219 Query: 161 VEGLF-DVIVSN 171 E L DV+V+N Sbjct: 220 PENLVADVLVAN 231 >gi|238924708|ref|YP_002938224.1| hypothetical protein EUBREC_2357 [Eubacterium rectale ATCC 33656] gi|238876383|gb|ACR76090.1| hypothetical protein EUBREC_2357 [Eubacterium rectale ATCC 33656] Length = 240 Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust. Identities = 23/70 (32%), Positives = 39/70 (55%), Gaps = 1/70 (1%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 + D+GT G V +AL++ + K + VDI+ LE A + NG++E+ T S+ + Sbjct: 14 LCDVGTDHGYVPIALVQSNIIPKAIAVDINKGPLERANEHIRANGLTEQITTRLSNGLEA 73 Query: 161 V-EGLFDVIV 169 + +G D IV Sbjct: 74 IHDGEVDSIV 83 >gi|213691917|ref|YP_002322503.1| Methylase of polypeptide chain release factors-like protein [Bifidobacterium longum subsp. infantis ATCC 15697] gi|213523378|gb|ACJ52125.1| Methylase of polypeptide chain release factors-like protein [Bifidobacterium longum subsp. infantis ATCC 15697] gi|320458019|dbj|BAJ68640.1| hypothetical protein BLIJ_1052 [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 378 Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust. Identities = 41/141 (29%), Positives = 59/141 (41%), Gaps = 17/141 (12%) Query: 85 ALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN 144 ALA L R+ +LD G G LL S V+++ A E++ NA N Sbjct: 133 ALACRLGTAPSRN--NVLDYCAGPGIQ--GLLSASHGAHVTAVEVNPLASELSLCNARLN 188 Query: 145 GVSERFDTLQSDWFSSVEGL----FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200 + F+ + S L FD I +NPP L + P + DGG Sbjct: 189 KLDNLFNVINKSVIESETDLKNLRFDFICANPP--------LLPIPFNLNYPFVG-DGGT 239 Query: 201 DGLSHYRTIADGVSRHLNKDG 221 DGLS +R I + HL+++G Sbjct: 240 DGLSIFRQIMNYGIPHLSRNG 260 >gi|54023589|ref|YP_117831.1| putative DNA metyltransferase [Nocardia farcinica IFM 10152] gi|54015097|dbj|BAD56467.1| putative DNA methyltransferase [Nocardia farcinica IFM 10152] Length = 558 Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust. Identities = 36/134 (26%), Positives = 55/134 (41%), Gaps = 16/134 (11%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+LD G G + LAL E+ + GV I ++ +S + +DW + Sbjct: 44 RVLDPACGEGELLLALHGEAARVR-PGVPIRMTGYDLDESALARARARAAAAGMVADWHT 102 Query: 160 S---------VEGLFDVIVSNPPY--IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208 G FD I++NPPY ++ + D L R+F L G ID + T Sbjct: 103 GDFLSEAARLGPGRFDAIITNPPYVRVQHLGADTARLLSREF----GLHGRIDLTHPFVT 158 Query: 209 IADGVSRHLNKDGL 222 +A + R GL Sbjct: 159 VAPRLLRPAGVLGL 172 >gi|331090275|ref|ZP_08339162.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Lachnospiraceae bacterium 3_1_46FAA] gi|330401894|gb|EGG81469.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Lachnospiraceae bacterium 3_1_46FAA] Length = 459 Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust. Identities = 28/77 (36%), Positives = 43/77 (55%), Gaps = 8/77 (10%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 + DL +GTG + L +P K V GV+I +A+E AK NA NG+S + + D F Sbjct: 317 VFDLFSGTGTISQVL---APVAKKVIGVEIVEEAVEAAKENAERNGLS-NCEFIAGDVFE 372 Query: 160 SVEGLF---DVIVSNPP 173 ++ + DVI+ +PP Sbjct: 373 VLDDIKEKPDVIILDPP 389 >gi|300869811|ref|YP_003784682.1| type-I restriction-modification system HsdM [Brachyspira pilosicoli 95/1000] gi|300687510|gb|ADK30181.1| type-I restriction-modification system, HsdM [Brachyspira pilosicoli 95/1000] Length = 529 Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust. Identities = 30/112 (26%), Positives = 48/112 (42%), Gaps = 15/112 (13%) Query: 72 FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLA----LLKESPFFKGVGV 127 F P+ +ELL + K ++ R+ D G+G++ L L E G Sbjct: 214 FTPQEVSELLTKITIT------GKSEIKRVYDPACGSGSLLLKFKRILKDEEKKIHYFGQ 267 Query: 128 DISCKALEIAKSNAVTNGVS-ERFDTLQSDWFSSVEGL----FDVIVSNPPY 174 +I+ + + N + + E+FD D + + L FD IVSNPPY Sbjct: 268 EINITTYNLCRINMFLHDIGFEKFDIAHGDTLTEPKHLSDEPFDAIVSNPPY 319 >gi|300812615|ref|ZP_07093028.1| ribosomal protein L11 methyltransferase [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|300496396|gb|EFK31505.1| ribosomal protein L11 methyltransferase [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] Length = 314 Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust. Identities = 39/138 (28%), Positives = 68/138 (49%), Gaps = 27/138 (19%) Query: 57 WRDFYNVRLTLS---------SDTFEPRPETELL-VDSALAF----------SLPRIEKR 96 W+ +Y+V + LS D P + E++ +D LAF ++ IE+ Sbjct: 115 WQKYYHV-INLSRHLAIVPEWEDYQPPFKDQEIIRLDPGLAFGTGNHQTTQLAMLGIERA 173 Query: 97 DV--VRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTL 153 V + + D+GTG+G + +A K K V DIS +++ A+ NA NG+ + Sbjct: 174 MVKPLTVADVGTGSGILAIAAHKLGA--KSVLATDISDESMTAAEENAALNGIHD-IALQ 230 Query: 154 QSDWFSSVEGLFDVIVSN 171 ++ + V+G FD+IV+N Sbjct: 231 KTSLLADVDGKFDLIVAN 248 >gi|149918556|ref|ZP_01907045.1| ribosomal protein L11 methyltransferase [Plesiocystis pacifica SIR-1] gi|149820632|gb|EDM80044.1| ribosomal protein L11 methyltransferase [Plesiocystis pacifica SIR-1] Length = 342 Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust. Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 23/93 (24%) Query: 76 PETELLVDSALAF-------------------SLPRIEKRDVVRILDLGTGTGAVCLALL 116 PE EL++D AF ++P + R R+LDLG G+G + L+ L Sbjct: 153 PEAELVLDPGRAFGTGLHESTRACLQLLVNLAAVPSWQPR---RVLDLGCGSGILGLSAL 209 Query: 117 KESPFFKGVGV-DISCKALEIAKSNAVTNGVSE 148 + P G+ + D +A++ ++ NA NG+ E Sbjct: 210 RLRPDLGGLQLTDHDPEAVDTSRENAALNGLGE 242 >gi|116621453|ref|YP_823609.1| SAM-dependent methyltransferase [Candidatus Solibacter usitatus Ellin6076] gi|116224615|gb|ABJ83324.1| SAM-dependent methyltransferase [Candidatus Solibacter usitatus Ellin6076] Length = 387 Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust. Identities = 31/102 (30%), Positives = 44/102 (43%), Gaps = 17/102 (16%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R LD T TG L L + + V D S ALE A++N+ NG+ + D ++D F Sbjct: 217 RALDCFTSTGGFALHLAPKCEHVEAV--DSSGPALEAARANSTANGI-DNIDWNEADVFD 273 Query: 160 SVEGL------FDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195 + G F ++V +PP R DP IS Sbjct: 274 LLSGYANARRQFSMVVLDPP--------AFAKNKRSLDPAIS 307 >gi|327179732|gb|AEA30280.1| O-methyltransferase [Streptomyces sp. Acta 2897] Length = 342 Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust. Identities = 27/93 (29%), Positives = 41/93 (44%), Gaps = 4/93 (4%) Query: 71 TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130 F P L D F P +LD+G GTG LL+ P ++ G++ Sbjct: 147 NFWAPPIVAALADGFETFEWPTDRP---ASVLDIGCGTGLYSQLLLERFPKWRATGLEAP 203 Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG 163 A IA++ A GV++RFD D+++ G Sbjct: 204 HIA-PIAEAQAQRLGVADRFDVQVRDFWTESWG 235 >gi|326664911|ref|XP_003197913.1| PREDICTED: trimethylguanosine synthase-like [Danio rerio] Length = 809 Score = 37.0 bits (84), Expect = 2.8, Method: Composition-based stats. Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 5/71 (7%) Query: 105 GTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL 164 G G A+ AL + + +G+DI L +A+ NA GV +R D LQ D+ L Sbjct: 653 GVGGNAIQFALTGK----RVIGIDIDPVRLALAQHNAAVYGVEQRIDFLQGDFLQLAPHL 708 Query: 165 F-DVIVSNPPY 174 D++ +PP+ Sbjct: 709 RGDMVFLSPPW 719 >gi|291541026|emb|CBL14137.1| Predicted N6-adenine-specific DNA methylase [Roseburia intestinalis XB6B4] Length = 498 Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust. Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 3/91 (3%) Query: 84 SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143 +A+ SL + ++ +ILD G G + + P + G+DI A+E A+ NA Sbjct: 336 AAMLVSLAKPYLKENAQILDPFCGVGTMLIERDIAQPAREKYGIDIFGLAIEGARENASL 395 Query: 144 NGVSERFDTLQSDWFS-SVEGLFDVIVSNPP 173 G E+ + + D+F + LFD I++N P Sbjct: 396 AG--EKINFIHRDYFDFKHDYLFDEIITNMP 424 >gi|257054996|ref|YP_003132828.1| putative methyltransferase [Saccharomonospora viridis DSM 43017] gi|256584868|gb|ACU96001.1| putative methyltransferase [Saccharomonospora viridis DSM 43017] Length = 189 Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust. Identities = 36/117 (30%), Positives = 60/117 (51%), Gaps = 14/117 (11%) Query: 75 RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL----KESPFFKGVGVDIS 130 RP TEL V AL SL + D VR+LDL +G+GA+ L L +E+ F V+ Sbjct: 22 RPTTEL-VREALFSSLEAAGELDGVRVLDLYSGSGALGLEALSRGAREAMF-----VEAD 75 Query: 131 CKALEIAKSNAVTNGVSE--RFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185 A+E+ + N G+ R +++ F++++++PPY +V + LG+ Sbjct: 76 RTAVEVLRGNIARVGLGGVVRQGKVETVVAEPAPEPFELVLADPPY--AVDAETLGV 130 >gi|224026279|ref|ZP_03644645.1| hypothetical protein BACCOPRO_03035 [Bacteroides coprophilus DSM 18228] gi|224019515|gb|EEF77513.1| hypothetical protein BACCOPRO_03035 [Bacteroides coprophilus DSM 18228] Length = 246 Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust. Identities = 28/72 (38%), Positives = 37/72 (51%), Gaps = 3/72 (4%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+LDLG G G C+ + E VGVDIS K LE+AK V + ++ F Sbjct: 45 RVLDLGCGYGWHCIYAM-EHGASSVVGVDISHKMLEVAKEKTHFPQVEYKCCAIEDVEFP 103 Query: 160 SVEGLFDVIVSN 171 E FDVI+S+ Sbjct: 104 --EESFDVILSS 113 >gi|254470255|ref|ZP_05083659.1| ribosomal protein L11 methyltransferase [Pseudovibrio sp. JE062] gi|211960566|gb|EEA95762.1| ribosomal protein L11 methyltransferase [Pseudovibrio sp. JE062] Length = 300 Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust. Identities = 33/92 (35%), Positives = 45/92 (48%), Gaps = 12/92 (13%) Query: 88 FSLPRIEKRDVV-RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146 L R+ KR R+LDLGTGTG + +AL K + + + DI A+E A NA N V Sbjct: 145 LELQRLLKRHKYHRMLDLGTGTGVLGIALAKLTG-SEVLATDIDPIAIEAAIDNARKNNV 203 Query: 147 SERFDTLQSDWFSSVE-------GLFDVIVSN 171 F + VE G FD++V+N Sbjct: 204 GPLFKAFTG---AGVEDRRFNEFGPFDLVVAN 232 >gi|71282574|ref|YP_267298.1| ribosomal protein L11 methyltransferase [Colwellia psychrerythraea 34H] gi|123633940|sp|Q489G6|PRMA_COLP3 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11 Mtase gi|71148314|gb|AAZ28787.1| ribosomal protein L11 methyltransferase [Colwellia psychrerythraea 34H] Length = 293 Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust. Identities = 27/72 (37%), Positives = 41/72 (56%), Gaps = 5/72 (6%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159 ++D G G+G + LA LK K +G+DI +AL+ + +NA N VS+R + L D Sbjct: 163 VVDFGCGSGILSLAALKLG-AKKVIGIDIDPQALQASLANAERNNVSDRLELYLPKD--- 218 Query: 160 SVEGLFDVIVSN 171 E DV+V+N Sbjct: 219 QPEFKADVVVAN 230 >gi|33151297|ref|NP_872650.1| ribosomal protein L11 methyltransferase [Haemophilus ducreyi 35000HP] gi|38605187|sp|Q7VPN5|PRMA_HAEDU RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11 Mtase gi|33147517|gb|AAP95039.1| ribosomal protein L11 methyltransferase [Haemophilus ducreyi 35000HP] Length = 293 Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust. Identities = 22/72 (30%), Positives = 43/72 (59%), Gaps = 4/72 (5%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159 ++D G G+G + ++ LK + +G+DI +A+ +++NA NGV++R L D Sbjct: 162 VIDFGCGSGILAISALKLGAK-QAIGIDIDPQAILASQNNAAANGVADRLQLFLAKDQPQ 220 Query: 160 SVEGLFDVIVSN 171 +++ DV+V+N Sbjct: 221 ALQA--DVVVAN 230 >gi|15669845|ref|NP_248659.1| hypothetical protein MJ_1649 [Methanocaldococcus jannaschii DSM 2661] gi|3334438|sp|Q59043|Y1649_METJA RecName: Full=Putative ribosomal RNA large subunit methyltransferase MJ1649 gi|1592232|gb|AAB99670.1| conserved hypothetical protein [Methanocaldococcus jannaschii DSM 2661] Length = 387 Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust. Identities = 24/82 (29%), Positives = 47/82 (57%), Gaps = 11/82 (13%) Query: 100 RILDLGTGTGAVCL-ALLKESPFFKGVGVDISCKALEIAKSNAVTNGV-SERFDTLQSDW 157 R+LD+ TG + A ++ + VGVD+S KAL++A+ N N + +R++ ++ + Sbjct: 216 RVLDICCYTGGFSVHAAIRGAEV---VGVDLSKKALKLAEENIELNNIPKDRYEFIEGNA 272 Query: 158 FSSVEGL------FDVIVSNPP 173 F ++ + FDV++ +PP Sbjct: 273 FEVMKEMIEDKEKFDVVILDPP 294 >gi|116753331|ref|YP_842449.1| methyltransferase small [Methanosaeta thermophila PT] gi|116664782|gb|ABK13809.1| methyltransferase [Methanosaeta thermophila PT] Length = 209 Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust. Identities = 41/150 (27%), Positives = 66/150 (44%), Gaps = 23/150 (15%) Query: 97 DVVRILDLGTGTG--AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF--DT 152 ++ +++DLG GTG A+ ALL + GVDI +AL IA+ NA GV F Sbjct: 45 ELSQVIDLGCGTGILAIGAALLGAMAY----GVDIDRQALRIARENAEMLGVHVDFILGD 100 Query: 153 LQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212 ++ F V+ ++ NPP+ G + R L ++ TI + Sbjct: 101 IERIAFRRVK----TVIMNPPF---------GAQRASRGDRAFLKKAVEIADVIYTIHNA 147 Query: 213 VSRHLNKDGL--CSVEIGYNQKVDVVRIFE 240 S + + + C VE Y ++ + R FE Sbjct: 148 GSLNFVRSFVSPCRVEEVYKARIPIKRTFE 177 >gi|305664504|ref|YP_003860791.1| ubiquinone/menaquinone biosynthesis methyltransferase [Maribacter sp. HTCC2170] gi|88708521|gb|EAR00757.1| ubiquinone/menaquinone biosynthesis methyltransferase [Maribacter sp. HTCC2170] Length = 242 Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust. Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 1/64 (1%) Query: 93 IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152 ++K+ V ILD+ TGTG + + L+K VG+DIS LE+ K + + + Sbjct: 53 LKKKKPVNILDIATGTGDLAINLVKTGA-TNIVGLDISPGMLEVGKKKVAQKNLGQTIEM 111 Query: 153 LQSD 156 ++ D Sbjct: 112 VEGD 115 >gi|255009493|ref|ZP_05281619.1| putative RNA methyltransferase [Bacteroides fragilis 3_1_12] Length = 472 Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust. Identities = 31/115 (26%), Positives = 57/115 (49%), Gaps = 17/115 (14%) Query: 72 FEPRPETELLVDSALAFSLPRIEKRDVV------RILDLGTGTGAVCLALLKESPFFKGV 125 F+ P++ +S A++L ++ RD + DL TGTG + + +++ + + Sbjct: 295 FKVGPKSFYQTNSGQAYNLYKV-ARDFAGLTGGELVYDLYTGTGTIANFVSRQAR--QVI 351 Query: 126 GVDISCKALEIAKSNAVTNGVSERF-------DTLQSDWFSSVEGLFDVIVSNPP 173 G++ +A+E AK NA NG+ D L D+ + G DVI+++PP Sbjct: 352 GIEYVPEAIEDAKVNAEINGIENTLFFAGDMKDILTQDFINQY-GRPDVIITDPP 405 >gi|163814172|ref|ZP_02205564.1| hypothetical protein COPEUT_00326 [Coprococcus eutactus ATCC 27759] gi|158450621|gb|EDP27616.1| hypothetical protein COPEUT_00326 [Coprococcus eutactus ATCC 27759] Length = 189 Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust. Identities = 34/123 (27%), Positives = 55/123 (44%), Gaps = 10/123 (8%) Query: 67 LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126 ++ D+ + RP T+ + ++ P I LDL +G+GA+ + L + V Sbjct: 15 VTVDSMDTRPTTDRIKETLFNVLSPDIPG---CSFLDLFSGSGAIGIEALSRGAK-RAVF 70 Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPPYIESVIV 180 V+ KALE N + + L +D S+V L FD+I +PPY S+ Sbjct: 71 VENGRKALECINKNLDFTKLRDGAQVLSTDAVSAVNTLERQKDVFDIIFMDPPYGRSLER 130 Query: 181 DCL 183 D L Sbjct: 131 DVL 133 >gi|150020095|ref|YP_001305449.1| ribosomal L11 methyltransferase [Thermosipho melanesiensis BI429] gi|259534597|sp|A6LJG3|PRMA_THEM4 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11 Mtase gi|149792616|gb|ABR30064.1| ribosomal L11 methyltransferase [Thermosipho melanesiensis BI429] Length = 258 Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust. Identities = 42/128 (32%), Positives = 60/128 (46%), Gaps = 12/128 (9%) Query: 78 TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEI 136 T L + LA +L + R + +LDLG G+G L++L + GV VD A+E Sbjct: 111 TGLHTTTKLAATLLKKYLRQGMDVLDLGCGSG--ILSILAKKLGASGVLAVDNDKMAVES 168 Query: 137 AKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL 196 A N N V + SD +V+G +D+IVSN +I D L + D P+ Sbjct: 169 AIENVEKNNV--EVEIRVSDLLKNVDGKYDLIVSN------IIADVLVKALEDM-PKFLK 219 Query: 197 DGGIDGLS 204 GI LS Sbjct: 220 KNGIVILS 227 >gi|75812663|ref|YP_320280.1| amino acid adenylation [Anabaena variabilis ATCC 29413] gi|75705419|gb|ABA25091.1| Amino acid adenylation [Anabaena variabilis ATCC 29413] Length = 2867 Score = 37.0 bits (84), Expect = 2.8, Method: Composition-based stats. Identities = 37/145 (25%), Positives = 66/145 (45%), Gaps = 22/145 (15%) Query: 62 NVRLTLSSDTFEPRPETELL--VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119 ++R +SSDT +P PE E++ DS L ++ + R+L++G GTG + L + Sbjct: 2069 SLRAWISSDTNQPLPEAEVIEYADSTAQRILSVMQPK---RVLEIGCGTGVILLRVAPHC 2125 Query: 120 PFFKGVGVDISCKAL------------EIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDV 167 + G DIS AL +I + + + F + ++ F ++ + + Sbjct: 2126 THY--CGTDISDVALRYTQQQLAIRQPDILTKVSFLHRAAHNFQDIATEQFDTI--ILNE 2181 Query: 168 IVSNPPYIESVIVDCLGLEVRDFDP 192 +V + P IE VD L V+ P Sbjct: 2182 VVQHFPSIE-YFVDVLQSAVKVVQP 2205 >gi|323143727|ref|ZP_08078395.1| ribosomal protein L11 methyltransferase [Succinatimonas hippei YIT 12066] gi|322416440|gb|EFY07106.1| ribosomal protein L11 methyltransferase [Succinatimonas hippei YIT 12066] Length = 293 Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust. Identities = 35/123 (28%), Positives = 56/123 (45%), Gaps = 13/123 (10%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LD G G+G + +A LK + GVDI +ALE ++ NA NGV ++ SS Sbjct: 161 VLDYGCGSGILAIAALKLG-AKEAYGVDIDPQALEASEENAKRNGVLDKLTLCDGKKSSS 219 Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT-----IADGVSR 215 V+ P + +++ L E+ +++ GG+ LS T I D S+ Sbjct: 220 ------VLTPAPVTVANILCGPLA-ELEPHIAKLTAQGGMLALSGILTEQAPEIIDAYSK 272 Query: 216 HLN 218 N Sbjct: 273 DFN 275 >gi|300864070|ref|ZP_07108970.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506] gi|300337949|emb|CBN54116.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506] Length = 296 Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust. Identities = 29/114 (25%), Positives = 53/114 (46%), Gaps = 16/114 (14%) Query: 76 PETELLVDSAL---AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCK 132 P +E +V L +PR RILDLG GTG+ L L + P + +G+D+S Sbjct: 83 PPSEAIVRQGLIDAVMGVPR-------RILDLGCGTGSTTLMLKQAFPQAEVIGMDLSPY 135 Query: 133 ALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSN------PPYIESVIV 180 + +A+ A G++ ++ ++ FD++ ++ PP + I+ Sbjct: 136 MILVAEMKAQKAGLNIQWRHGNAEQTGFPNASFDLVTASLLFHETPPTVSQNIL 189 >gi|284048077|ref|YP_003398416.1| ribosomal protein L11 methyltransferase [Acidaminococcus fermentans DSM 20731] gi|283952298|gb|ADB47101.1| ribosomal protein L11 methyltransferase [Acidaminococcus fermentans DSM 20731] Length = 313 Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust. Identities = 34/132 (25%), Positives = 63/132 (47%), Gaps = 23/132 (17%) Query: 57 WRDFYN-------VRLTLSSDTFEPRPETELL-VDSALAFS----------LPRIEK--R 96 W+ +++ + + S +T+EP+ E +++ +D +AF + R+E+ Sbjct: 115 WKQYFHTTKVGKKIVIKPSWETYEPQGEEKVIALDPGMAFGTGTHATTSMCIQRLEELVT 174 Query: 97 DVVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQS 155 + D+GTG+G LA+ K + VDI KA+E+A+ N NG+S+R Q Sbjct: 175 PDCEVFDVGTGSG--ILAMAAALLGAKTIHAVDIDEKAVEVARENIAQNGLSDRVTVNQG 232 Query: 156 DWFSSVEGLFDV 167 + G D+ Sbjct: 233 NLLDGTPGQADL 244 >gi|163844394|ref|YP_001622049.1| methyltransferase [Brucella suis ATCC 23445] gi|163675117|gb|ABY39227.1| Methyltransferase [Brucella suis ATCC 23445] Length = 187 Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust. Identities = 39/130 (30%), Positives = 61/130 (46%), Gaps = 14/130 (10%) Query: 53 RILGWRDFYNVRLTLSSDTFEPRPETELLVDS---ALAFSLPRIEKRDVVRILDLGTGTG 109 RI+G + + R ++ T RP T+ +S LA S P +K + VR+LDL GTG Sbjct: 2 RIVGGK--FRGRALVTPSTNAIRPTTDRTRESLFNILAHSFP--DKVEGVRVLDLFAGTG 57 Query: 110 AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-----RFDTLQSDWFSSVEGL 164 A+ L L + V+ S + I + N G+ R D Q ++E Sbjct: 58 ALGLEALSRGARYATF-VEESAEGRGILRQNIEALGLQGHTKILRRDACQLGIVGTME-P 115 Query: 165 FDVIVSNPPY 174 FD++ ++PPY Sbjct: 116 FDLVFADPPY 125 >gi|52222860|gb|AAU34201.1| methyltransferase MppJ [Streptomyces hygroscopicus] Length = 337 Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust. Identities = 30/127 (23%), Positives = 55/127 (43%), Gaps = 9/127 (7%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 + DLG+G+G + + + P +G+GVDI+ A+ +A+ G ++ ++ D Sbjct: 162 VADLGSGSGERLIQIARRFPGVRGLGVDIADGAIAMAEKEVAAKGFGDQISFVRGD---- 217 Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220 D + + + E ++ C + DF PR + + L R V R L D Sbjct: 218 -ARTIDQVSARGEFAEVDLLTCF-MMGHDFWPR---ENCVQTLRKLRAAFPNVRRFLLGD 272 Query: 221 GLCSVEI 227 +V I Sbjct: 273 ATRTVGI 279 >gi|295398609|ref|ZP_06808640.1| O-methyltransferase [Aerococcus viridans ATCC 11563] gi|294973149|gb|EFG48945.1| O-methyltransferase [Aerococcus viridans ATCC 11563] Length = 252 Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust. Identities = 27/102 (26%), Positives = 48/102 (47%), Gaps = 7/102 (6%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL-LKESPFFKGVGVDISCKALEIAKSN 140 VD+ L ++ V +++D +G G + L L K S + G++I + ++AK + Sbjct: 33 VDAILLAHFAQVSSSRVKQVIDFCSGNGVIPLLLSAKTSDKTQIHGIEIQPQVADMAKRS 92 Query: 141 AVTNGVSERFDTLQSDWFSSVEGLF-----DVIVSNPPYIES 177 N ++++ Q D SV F DV+ NPPY + Sbjct: 93 MAHNDLADKITVHQMD-LKSVRDHFKKDSVDVVTCNPPYFKK 133 >gi|289705498|ref|ZP_06501890.1| methyltransferase small domain protein [Micrococcus luteus SK58] gi|289557727|gb|EFD51026.1| methyltransferase small domain protein [Micrococcus luteus SK58] Length = 405 Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust. Identities = 23/89 (25%), Positives = 43/89 (48%), Gaps = 1/89 (1%) Query: 94 EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153 + R R++DLG G G + + + P V D S A+ + A N V++R + Sbjct: 258 DPRPPGRVVDLGCGNGLLSVGAARLWPHVTVVATDQSAVAVASTLATARANRVADRVRAV 317 Query: 154 QSDWFSS-VEGLFDVIVSNPPYIESVIVD 181 + D ++ +G + ++ NPP+ + VD Sbjct: 318 RDDALATWPDGTEECVLLNPPFHDGNAVD 346 >gi|283469338|emb|CAQ48549.1| methyltransferase domain family [Staphylococcus aureus subsp. aureus ST398] Length = 243 Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust. Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 3/82 (3%) Query: 90 LPRIEKRDVVRILDLGTGTGAVCLALLKE-SPFFKGVGVDISCKALEIAKSNAVTNGVSE 148 L R + ++ +R+LD+G TG V + K + VGVD++ L+IA N N VS Sbjct: 12 LDRAQIKEGMRVLDIGCATGEVTQLIAKRVGANGEVVGVDVNESLLKIANENNQYNNVSY 71 Query: 149 RFDTLQSDWFSSVEGLFDVIVS 170 ++ + G FD IV Sbjct: 72 QYSDIYQ--LPETMGHFDAIVG 91 >gi|253581983|ref|ZP_04859207.1| ribosomal protein L11 methyltransferase [Fusobacterium varium ATCC 27725] gi|251836332|gb|EES64869.1| ribosomal protein L11 methyltransferase [Fusobacterium varium ATCC 27725] Length = 312 Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust. Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 13/104 (12%) Query: 101 ILDLGTGTGAVCLAL--LKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDW 157 ++D+GTG+G + +A L S + G DI A+E AK N N + E + + D Sbjct: 177 VIDVGTGSGILMIAADRLGASEIY---GTDIDELAVESAKENLELNKIDENKAKVFKGDL 233 Query: 158 FSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200 S VE FDV+V+N ++ D L + + D + DG I Sbjct: 234 ISVVENKKFDVVVAN------ILADVLLILLNDISKVVKKDGLI 271 >gi|254572646|ref|XP_002493432.1| hypothetical protein [Pichia pastoris GS115] gi|238033231|emb|CAY71253.1| Hypothetical protein PAS_chr4_0027 [Pichia pastoris GS115] Length = 387 Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust. Identities = 31/121 (25%), Positives = 54/121 (44%), Gaps = 6/121 (4%) Query: 59 DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118 +++ +++ L PR L + + + + D ILD+GTG + L Sbjct: 50 EYFQLKVQLDKTRLCPRIPNRLKYLRLVGSLVEQFKLGDSPLILDIGTGHTCIYPLLGSR 109 Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ-----SDWFSSVEGLFDVIVSNPP 173 ++ +G DI ++LE AK N VS L+ D F +E DV+++NPP Sbjct: 110 LTSWRFIGTDIDERSLECAKKVLEENNVSSERIQLKLVRSGDDPFMDIENC-DVVMTNPP 168 Query: 174 Y 174 + Sbjct: 169 F 169 >gi|187734982|ref|YP_001877094.1| methyltransferase [Akkermansia muciniphila ATCC BAA-835] gi|187425034|gb|ACD04313.1| methyltransferase [Akkermansia muciniphila ATCC BAA-835] Length = 191 Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust. Identities = 44/145 (30%), Positives = 68/145 (46%), Gaps = 19/145 (13%) Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 +TLS E RP T+ + ++ + P +++ DV LDL G+GA L L Sbjct: 11 ITLSVPKGEVRPTTDRVREAVFSILNPLMDRADV---LDLFAGSGAFGLEALSRGARDAR 67 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSD--WFSSVEGL----FDVIVSNPPYIESV 178 + VD S + A++N V G+ E +Q D F E L +D+I ++PPY Sbjct: 68 M-VDFSRLSCAAARANLVKTGL-EGGTVIQGDAVQFVRRELLAGRKYDIIFADPPY---- 121 Query: 179 IVDCLGLEVRDFDPRISLDGGIDGL 203 C G RDF ++ + G+ GL Sbjct: 122 ---CKGPADRDFIVELA-EAGVAGL 142 >gi|82407927|pdb|2AVN|A Chain A, Crystal Structure Of A UbiquinoneMENAQUINONE BIOSYNTHESIS Methyltransferase-Related Protein (Tm1389) From Thermotoga Maritima Msb8 At 2.35 A Resolution gi|82407928|pdb|2AVN|B Chain B, Crystal Structure Of A UbiquinoneMENAQUINONE BIOSYNTHESIS Methyltransferase-Related Protein (Tm1389) From Thermotoga Maritima Msb8 At 2.35 A Resolution Length = 260 Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust. Identities = 39/121 (32%), Positives = 61/121 (50%), Gaps = 14/121 (11%) Query: 53 RILGWRDFYNVRLTLSSDTFEPRPETEL---LVDSALAFSLPRIEKRDVVRILDLGTGTG 109 ++ W +FY+ R+ + D+ P+ +L L+ S L L ++ R+LDLG GTG Sbjct: 14 KLRSW-EFYD-RIARAYDSXYETPKWKLYHRLIGSFLEEYL-----KNPCRVLDLGGGTG 66 Query: 110 AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL--QSDWFSSVEGLFDV 167 L L + F+ V VD S + LE+A+ V N V + + L S F +V L DV Sbjct: 67 KWSLFLQERG--FEVVLVDPSKEXLEVAREKGVKNVVEAKAEDLPFPSGAFEAVLALGDV 124 Query: 168 I 168 + Sbjct: 125 L 125 >gi|332532819|ref|ZP_08408692.1| putative ribosomal RNA small subunit methyltransferase D [Pseudoalteromonas haloplanktis ANT/505] gi|332037665|gb|EGI74116.1| putative ribosomal RNA small subunit methyltransferase D [Pseudoalteromonas haloplanktis ANT/505] Length = 380 Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust. Identities = 30/95 (31%), Positives = 46/95 (48%), Gaps = 7/95 (7%) Query: 90 LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 LP K I+DLG G G V L L P VD S A+E A+ N N + ++ Sbjct: 225 LPETPK--AKSIIDLGCGNGVVGLMTLARCPNASVTFVDESYMAVESARLNVEIN-LGDK 281 Query: 150 FDT---LQSDWFSSVE-GLFDVIVSNPPYIESVIV 180 FD +++D + E D+++ NPP+ ++ V Sbjct: 282 FDNCEFIENDCLTGFERDSVDMVLCNPPFHQAQAV 316 >gi|317480611|ref|ZP_07939699.1| methyltransferase domain-containing protein [Bacteroides sp. 4_1_36] gi|316903237|gb|EFV25103.1| methyltransferase domain-containing protein [Bacteroides sp. 4_1_36] Length = 246 Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust. Identities = 28/72 (38%), Positives = 37/72 (51%), Gaps = 3/72 (4%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+LDLG G G C+ + E VGVDIS K LE+AK V + ++ F Sbjct: 45 RVLDLGCGYGWHCIYAM-EHGASSVVGVDISHKMLEVAKEKTHFPQVEYKCCAIEDVEFP 103 Query: 160 SVEGLFDVIVSN 171 E FDVI+S+ Sbjct: 104 --EESFDVILSS 113 >gi|303248612|ref|ZP_07334867.1| ubiquinone/menaquinone biosynthesis methyltransferase [Desulfovibrio fructosovorans JJ] gi|302489962|gb|EFL49886.1| ubiquinone/menaquinone biosynthesis methyltransferase [Desulfovibrio fructosovorans JJ] Length = 229 Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust. Identities = 18/47 (38%), Positives = 26/47 (55%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147 +LD TGTG V LA+ + P + +G+D S L +A+ GVS Sbjct: 47 VLDAATGTGEVALAIRRRRPGLRVLGLDFSPAMLAVAREKIRRRGVS 93 >gi|270294142|ref|ZP_06200344.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Bacteroides sp. D20] gi|317478899|ref|ZP_07938047.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Bacteroides sp. 4_1_36] gi|270275609|gb|EFA21469.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Bacteroides sp. D20] gi|316904933|gb|EFV26739.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Bacteroides sp. 4_1_36] Length = 473 Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust. Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 10/80 (12%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF-------DTL 153 + DL TGTG + + K + + +G++ +A+E AK NA NG+ D L Sbjct: 329 VYDLYTGTGTIANFVSKHAR--QVIGIEYVPEAIEDAKVNAEINGIKNTLFFAGDMKDML 386 Query: 154 QSDWFSSVEGLFDVIVSNPP 173 D+ + G DVI+++PP Sbjct: 387 TQDFINQY-GRPDVIITDPP 405 >gi|302555308|ref|ZP_07307650.1| methyltransferase type 12 [Streptomyces viridochromogenes DSM 40736] gi|302472926|gb|EFL36019.1| methyltransferase type 12 [Streptomyces viridochromogenes DSM 40736] Length = 313 Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust. Identities = 20/56 (35%), Positives = 29/56 (51%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 I+D G+G G V + P + V VD S LE A++ A GV +RF T+ + Sbjct: 73 IVDAGSGPGVVSCLFAETFPAARIVAVDGSAPLLERARARAERQGVGDRFSTIAGE 128 >gi|254695337|ref|ZP_05157165.1| methyltransferase [Brucella abortus bv. 3 str. Tulya] Length = 187 Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust. Identities = 39/130 (30%), Positives = 61/130 (46%), Gaps = 14/130 (10%) Query: 53 RILGWRDFYNVRLTLSSDTFEPRPETELLVDS---ALAFSLPRIEKRDVVRILDLGTGTG 109 RI+G + + R ++ T RP T+ +S LA S P +K + VR+LDL GTG Sbjct: 2 RIVGGK--FRGRALVTPSTNAIRPTTDRTRESLFNILAHSFP--DKVEGVRVLDLFAGTG 57 Query: 110 AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-----RFDTLQSDWFSSVEGL 164 A+ L L + V+ S + I + N G+ R D Q ++E Sbjct: 58 ALGLEALSRGARYATF-VEESAEGRGILRQNIEALGLQGHTKILRRDACQLGIVGTME-P 115 Query: 165 FDVIVSNPPY 174 FD++ ++PPY Sbjct: 116 FDLVFADPPY 125 >gi|268317880|ref|YP_003291599.1| ubiquinone/menaquinone biosynthesis methyltransferase [Rhodothermus marinus DSM 4252] gi|262335414|gb|ACY49211.1| ubiquinone/menaquinone biosynthesis methyltransferase [Rhodothermus marinus DSM 4252] Length = 245 Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust. Identities = 17/50 (34%), Positives = 29/50 (58%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 R+LD+ TGT + + + + P + VGVDI+ L++ + G+SER Sbjct: 62 RVLDVATGTADLAIEVARRLPVERVVGVDIAESMLQVGRQKVDRLGLSER 111 >gi|313126501|ref|YP_004036771.1| methyltransferase [Halogeometricum borinquense DSM 11551] gi|312292866|gb|ADQ67326.1| methyltransferase [Halogeometricum borinquense DSM 11551] Length = 207 Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust. Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 3/76 (3%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 ++DLGTGTG + L P + VGVDI AL+ A+ N + G + +++D + Sbjct: 52 VVDLGTGTGMLALGAALRGP-ARVVGVDIDADALDTARENRIRVGTTTPIHWVRADATQA 110 Query: 161 VEGLFD--VIVSNPPY 174 + + ++ NPP+ Sbjct: 111 PLCIDEPTTVLMNPPF 126 >gi|220930175|ref|YP_002507084.1| methyltransferase type 11 [Clostridium cellulolyticum H10] gi|220000503|gb|ACL77104.1| Methyltransferase type 11 [Clostridium cellulolyticum H10] Length = 246 Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust. Identities = 28/72 (38%), Positives = 37/72 (51%), Gaps = 3/72 (4%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+LDLG G G C+ + E VGVDIS K LE+AK V + ++ F Sbjct: 45 RVLDLGCGYGWHCIYAM-EHGASSVVGVDISHKMLEVAKEKTHFPQVEYKCCAIEDVEFP 103 Query: 160 SVEGLFDVIVSN 171 E FDVI+S+ Sbjct: 104 --EESFDVILSS 113 >gi|158319773|ref|YP_001512280.1| RNA methyltransferase [Alkaliphilus oremlandii OhILAs] gi|158139972|gb|ABW18284.1| RNA methyltransferase, TrmA family [Alkaliphilus oremlandii OhILAs] Length = 450 Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust. Identities = 26/77 (33%), Positives = 43/77 (55%), Gaps = 8/77 (10%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 + DL +GTG + + +P K V G++I +A+E+AK NA NG+ + + + D Sbjct: 310 VFDLYSGTGTIAQIM---APVAKKVIGIEIVEEAVEMAKENAKMNGL-DNVEFIAGDVLE 365 Query: 160 SVEGLF---DVIVSNPP 173 +V L D+IV +PP Sbjct: 366 AVNDLKEKPDLIVIDPP 382 >gi|319406074|emb|CBI79704.1| 3-demethylubiquinone-9 3-methyltransferase [Bartonella sp. AR 15-3] Length = 247 Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust. Identities = 22/72 (30%), Positives = 41/72 (56%), Gaps = 2/72 (2%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 +RILD+G G G +C + + +GVD + +E+AK +A+ +G+S + T ++ Sbjct: 66 LRILDIGCGGGLLCEPMARLGATV--IGVDAAQMNIEVAKIHAIQSGLSIDYRTATAEVL 123 Query: 159 SSVEGLFDVIVS 170 + FDVI++ Sbjct: 124 VNKGEQFDVILN 135 >gi|317501056|ref|ZP_07959262.1| 23S rRNA (Uracil-5-)-methyltransferase RumA [Lachnospiraceae bacterium 8_1_57FAA] gi|316897443|gb|EFV19508.1| 23S rRNA (Uracil-5-)-methyltransferase RumA [Lachnospiraceae bacterium 8_1_57FAA] Length = 460 Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust. Identities = 28/77 (36%), Positives = 43/77 (55%), Gaps = 8/77 (10%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 + DL +GTG + L +P K V GV+I +A+E AK NA NG+S + + D F Sbjct: 317 VFDLFSGTGTISQVL---APVAKKVIGVEIVEEAVEAAKENAERNGLS-NCEFIAGDVFE 372 Query: 160 SVEGLF---DVIVSNPP 173 ++ + DVI+ +PP Sbjct: 373 VLDDIKEKPDVIILDPP 389 >gi|225867900|ref|YP_002743848.1| methyltransferase [Streptococcus equi subsp. zooepidemicus] gi|225701176|emb|CAW98081.1| putative methyltransferase [Streptococcus equi subsp. zooepidemicus] Length = 247 Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust. Identities = 48/160 (30%), Positives = 71/160 (44%), Gaps = 17/160 (10%) Query: 81 LVDSALAFSLPRIEK-RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKS 139 L D AFSL + K RD ++L+L GTG + + F+ G+D+S + LE+AK Sbjct: 20 LYDKWTAFSLRHLPKSRDQQQLLELACGTGIQSVRFAQAG--FEVTGLDLSQEMLEVAKK 77 Query: 140 NAVTNGVSERFDTLQSDWFS-SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL-- 196 A + + F +Q + S G FDV+ Y +S+ +EV D + Sbjct: 78 RAQSAKKAITF--VQGNMLDLSQAGSFDVVTC---YSDSICYMQDEIEVGDVFKEVYQVL 132 Query: 197 -DGGI---DGLSHYRT--IADGVSRHLNKDGLCSVEIGYN 230 DGGI D S Y+ + G S H N + V Y Sbjct: 133 NDGGIFMFDVHSIYQMDHLFPGYSYHENAEEFAMVWDTYK 172 >gi|125974059|ref|YP_001037969.1| methyltransferase type 12 [Clostridium thermocellum ATCC 27405] gi|256004465|ref|ZP_05429445.1| Methyltransferase type 12 [Clostridium thermocellum DSM 2360] gi|281418209|ref|ZP_06249229.1| Methyltransferase type 12 [Clostridium thermocellum JW20] gi|125714284|gb|ABN52776.1| Methyltransferase type 12 [Clostridium thermocellum ATCC 27405] gi|255991606|gb|EEU01708.1| Methyltransferase type 12 [Clostridium thermocellum DSM 2360] gi|281409611|gb|EFB39869.1| Methyltransferase type 12 [Clostridium thermocellum JW20] gi|316941305|gb|ADU75339.1| Methyltransferase type 12 [Clostridium thermocellum DSM 1313] Length = 223 Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust. Identities = 26/72 (36%), Positives = 37/72 (51%), Gaps = 4/72 (5%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN-AVTNGVSERFDTLQSDWF 158 R+LDLG GTG + KE P + V VDI+ + LEI++ A + + + D Sbjct: 45 RVLDLGAGTGLLTYYWYKECPSAEYVLVDIADEMLEISRKRFAGIDRIQHKILDYSKD-- 102 Query: 159 SSVEGLFDVIVS 170 EG FD I+S Sbjct: 103 -LPEGNFDAIIS 113 >gi|325963544|ref|YP_004241450.1| 23S rRNA m(2)G-1835 methyltransferase [Arthrobacter phenanthrenivorans Sphe3] gi|323469631|gb|ADX73316.1| 23S rRNA m(2)G-1835 methyltransferase [Arthrobacter phenanthrenivorans Sphe3] Length = 398 Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust. Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 1/74 (1%) Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 +DLG GTG + ++ P D S A+ A++ A NG+SER LQ D ++ Sbjct: 252 VDLGCGTGILAAMYARQHPGSAVTATDQSAAAVASARATAGANGLSERITVLQDDALGTM 311 Query: 162 EGL-FDVIVSNPPY 174 D+++ NPP+ Sbjct: 312 AAASADLVLLNPPF 325 >gi|298485717|ref|ZP_07003796.1| Ribosomal RNA small subunit methyltransferase C [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298159743|gb|EFI00785.1| Ribosomal RNA small subunit methyltransferase C [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|320325729|gb|EFW81790.1| ribosomal RNA small subunit methyltransferase C [Pseudomonas syringae pv. glycinea str. B076] gi|320327352|gb|EFW83366.1| ribosomal RNA small subunit methyltransferase C [Pseudomonas syringae pv. glycinea str. race 4] gi|330988565|gb|EGH86668.1| ribosomal RNA small subunit methyltransferase C [Pseudomonas syringae pv. lachrymans str. M301315] gi|331008904|gb|EGH88960.1| ribosomal RNA small subunit methyltransferase C [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 332 Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust. Identities = 26/105 (24%), Positives = 44/105 (41%), Gaps = 2/105 (1%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 +D A L I+K +LD G G G + A+ + P + +D+ A ++ Sbjct: 176 LDRGSALLLENIDKLPSGNLLDFGCGAGVLGAAVKRRYPHNDVIMLDVDAFATASSRLTL 235 Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLE 186 NG+ + L D + + I+SNPP+ V D + E Sbjct: 236 AANGLQAQ--VLTGDGIDAAPMGLNTILSNPPFHVGVHTDYMATE 278 >gi|218463249|ref|ZP_03503340.1| ribosomal protein L11 methyltransferase [Rhizobium etli Kim 5] Length = 292 Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust. Identities = 26/76 (34%), Positives = 37/76 (48%), Gaps = 9/76 (11%) Query: 102 LDLGTGTGAVCLAL--LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 LDLGTG+G + +A+ LK P DI A +A N NG++ T + F Sbjct: 156 LDLGTGSGVLAIAVRKLKNIPVL---ATDIDPIATRVAAENVRRNGIASGIVTRTAPGFH 212 Query: 160 SV----EGLFDVIVSN 171 S G FD+I++N Sbjct: 213 STAFSEHGPFDLIIAN 228 >gi|218710465|ref|YP_002418086.1| 16S RNA methylase RsmC [Vibrio splendidus LGP32] gi|218323484|emb|CAV19661.1| 16S RNA methylase RsmC [Vibrio splendidus LGP32] Length = 340 Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust. Identities = 31/128 (24%), Positives = 56/128 (43%), Gaps = 21/128 (16%) Query: 57 WRDFYNVRLTLSSDTFEPRPE----------TELLVDSALAFSLPRIEKRDVVRILDLGT 106 W Y V + S T + P ++LL+D+ LP+++ + +LD G Sbjct: 159 WFKTYTVNIGEQSLTVKSLPGVFSHGQFDVGSQLLLDT-----LPKLKGK----VLDFGC 209 Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFD 166 G G + + P + DIS A+ +++ NG++ + SD +S + Sbjct: 210 GAGVLGAVMASRHPDIELEMCDISAFAVASSQATLEANGLTG--NVFASDVYSDTSKDYQ 267 Query: 167 VIVSNPPY 174 I+SNPP+ Sbjct: 268 FIISNPPF 275 >gi|218246859|ref|YP_002372230.1| type 12 methyltransferase [Cyanothece sp. PCC 8801] gi|218167337|gb|ACK66074.1| Methyltransferase type 12 [Cyanothece sp. PCC 8801] Length = 441 Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust. Identities = 17/45 (37%), Positives = 29/45 (64%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145 ILD+ G+G L+L + +P K +G+DIS +LE+A++ +G Sbjct: 62 ILDVACGSGYTTLSLAEANPGAKIIGIDISQASLEMAEARLKYHG 106 >gi|17227508|ref|NP_484056.1| hypothetical protein all0012 [Nostoc sp. PCC 7120] gi|17134990|dbj|BAB77536.1| all0012 [Nostoc sp. PCC 7120] Length = 399 Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust. Identities = 26/86 (30%), Positives = 41/86 (47%), Gaps = 1/86 (1%) Query: 84 SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143 +A +F R + +RILD G G+G L+ +P + VG+D+S L +AK Sbjct: 41 AAHSFCTGRKPAKQDIRILDAGCGSGVGTEYLVHLNPQAQVVGIDLSAGTLAVAKVRCQR 100 Query: 144 NGVSE-RFDTLQSDWFSSVEGLFDVI 168 +G + F L + G FD+I Sbjct: 101 SGANRVEFHHLSLYDVEQLPGEFDLI 126 >gi|331229725|ref|XP_003327528.1| hypothetical protein PGTG_09062 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309306518|gb|EFP83109.1| hypothetical protein PGTG_09062 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 225 Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust. Identities = 33/107 (30%), Positives = 54/107 (50%), Gaps = 21/107 (19%) Query: 100 RILDLGTGTGAVCLA-LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER-FDTLQSDW 157 R+LDLG G G + +A L S + +GVD+ AL +A++N + +S+ D +Q+D Sbjct: 54 RVLDLGCGCGILSIASTLLGSAY--TLGVDLDPDALLVARNNLASLDISDSTIDFIQADL 111 Query: 158 FSSV----------------EGLFDVIVSNPPY-IESVIVDCLGLEV 187 SS E FD +V NPP+ ++ +D + LE+ Sbjct: 112 SSSSSFRDLFGGHSRNDSEEEPFFDTVVMNPPFGTKNKGIDIVFLEI 158 >gi|291527129|emb|CBK92715.1| Predicted SAM-dependent methyltransferase [Eubacterium rectale M104/1] Length = 240 Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust. Identities = 23/70 (32%), Positives = 39/70 (55%), Gaps = 1/70 (1%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 + D+GT G V +AL++ + K + VDI+ LE A + NG++E+ T S+ + Sbjct: 14 LCDVGTDHGYVPIALVQSNIIPKAIAVDINKGPLERANEHIRANGLTEQITTRLSNGLEA 73 Query: 161 V-EGLFDVIV 169 + +G D IV Sbjct: 74 IHDGEVDSIV 83 >gi|302864689|ref|YP_003833326.1| methyltransferase [Micromonospora aurantiaca ATCC 27029] gi|302567548|gb|ADL43750.1| Methyltransferase type 12 [Micromonospora aurantiaca ATCC 27029] Length = 496 Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust. Identities = 20/50 (40%), Positives = 31/50 (62%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 R+LDLG G GA+ AL+ + F + VGVD+S ++L +A + + ER Sbjct: 302 RVLDLGCGGGALLTALVADRRFTEVVGVDVSDRSLGLAARRLRLDRLPER 351 >gi|254699497|ref|ZP_05161325.1| methyltransferase [Brucella suis bv. 5 str. 513] gi|261749952|ref|ZP_05993661.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513] gi|261739705|gb|EEY27631.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513] Length = 187 Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust. Identities = 39/130 (30%), Positives = 61/130 (46%), Gaps = 14/130 (10%) Query: 53 RILGWRDFYNVRLTLSSDTFEPRPETELLVDS---ALAFSLPRIEKRDVVRILDLGTGTG 109 RI+G + + R ++ T RP T+ +S LA S P +K + VR+LDL GTG Sbjct: 2 RIVGGK--FRGRALVTPSTNAIRPTTDRTRESLFNILAHSFP--DKVEGVRVLDLFAGTG 57 Query: 110 AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-----RFDTLQSDWFSSVEGL 164 A+ L L + V+ S + I + N G+ R D Q ++E Sbjct: 58 ALGLEALSRGARYATF-VEESAEGRGILRQNIEALGLQGHTKILRRDACQLGIVGTMEP- 115 Query: 165 FDVIVSNPPY 174 FD++ ++PPY Sbjct: 116 FDLVFADPPY 125 >gi|190890603|ref|YP_001977145.1| cyclopropane-fatty-acyl-phospholipid synthase [Rhizobium etli CIAT 652] gi|190695882|gb|ACE89967.1| cyclopropane-fatty-acyl-phospholipid synthase protein [Rhizobium etli CIAT 652] Length = 419 Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust. Identities = 21/71 (29%), Positives = 39/71 (54%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 RIL++G+G G + + L + + G+ +S + L+++++ A G+SER D+ + Sbjct: 176 RILEIGSGWGGMGMYLAEATEGADFTGITLSEEQLKVSRTRAEKRGLSERVRFELQDYRT 235 Query: 160 SVEGLFDVIVS 170 FD IVS Sbjct: 236 MTGRKFDRIVS 246 >gi|72004309|ref|XP_781570.1| PREDICTED: similar to MGC80044 protein [Strongylocentrotus purpuratus] gi|115969573|ref|XP_001176737.1| PREDICTED: similar to MGC80044 protein [Strongylocentrotus purpuratus] Length = 232 Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust. Identities = 31/85 (36%), Positives = 44/85 (51%), Gaps = 4/85 (4%) Query: 87 AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI-AKSNAVTNG 145 A +L R+ VRILD+G GTG V L ++ + GVD+S +L++ K + Sbjct: 63 ADALTRLVTNRDVRILDVGCGTGLVGQQLY-DNGYRDIHGVDMSAGSLKVLEKKQIYSKL 121 Query: 146 VSERFDTLQSDWFSSVEGLFDVIVS 170 V RFD S +G FDVI+S Sbjct: 122 VKARFDP--STPLQYADGYFDVIIS 144 >gi|322391010|ref|ZP_08064514.1| site-specific DNA-methyltransferase [Streptococcus parasanguinis ATCC 903] gi|321142240|gb|EFX37714.1| site-specific DNA-methyltransferase [Streptococcus parasanguinis ATCC 903] Length = 385 Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust. Identities = 25/59 (42%), Positives = 30/59 (50%), Gaps = 13/59 (22%) Query: 125 VGVDISCKALEIAKSNAVTNGVSE-------RFDTLQSDWFSSVEGLFDVIVSNPPYIE 176 +G DI + +EIAK NA GVS R L SD + G VI+SNPPY E Sbjct: 260 MGTDIDARMVEIAKENAQKAGVSSDITFKQMRVQDLHSD---KING---VIISNPPYGE 312 >gi|315608157|ref|ZP_07883149.1| 23S rRNA (uracil-5-)-methyltransferase [Prevotella buccae ATCC 33574] gi|315250126|gb|EFU30123.1| 23S rRNA (uracil-5-)-methyltransferase [Prevotella buccae ATCC 33574] Length = 490 Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust. Identities = 23/79 (29%), Positives = 41/79 (51%), Gaps = 8/79 (10%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER------FDTLQ 154 + DL TGTG + + +E+ + +G++ +A+E AK N+ NG+ + Sbjct: 347 VYDLYTGTGTIANFVAREAK--QVIGIEYVPEAIEDAKVNSEINGIDNTLFYAGDMKDIL 404 Query: 155 SDWFSSVEGLFDVIVSNPP 173 +D F G DVI+++PP Sbjct: 405 NDEFIRQHGRPDVIITDPP 423 >gi|268326452|emb|CBH40040.1| conserved hypothetical protein, SAM-dependent methyltransferase type 11 family [uncultured archaeon] Length = 247 Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust. Identities = 18/41 (43%), Positives = 28/41 (68%), Gaps = 2/41 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 +LDLGTGTG + +LK+ FK +G+D+S L++A+ A Sbjct: 57 VLDLGTGTGFLARIILKQG--FKVLGLDLSKNMLDVARRKA 95 >gi|254581416|ref|XP_002496693.1| ZYRO0D05940p [Zygosaccharomyces rouxii] gi|238939585|emb|CAR27760.1| ZYRO0D05940p [Zygosaccharomyces rouxii] Length = 222 Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust. Identities = 42/166 (25%), Positives = 76/166 (45%), Gaps = 13/166 (7%) Query: 72 FEPRPETELLVD---SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES-PFFKG--- 124 +EP ++ LL+D +F R + + + +LG G+G V L++ P G Sbjct: 15 YEPCEDSFLLLDGLEQEQSFLQTRFRNQLAI-VCELGPGSGIVTTFLMQNDIPHGNGSIY 73 Query: 125 VGVDISCKALEIAKSNAVTNGVSERF-DTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDC 182 + +DIS ALE + N R+ +QSD + + D++V NPPY+ + V Sbjct: 74 LALDISPWALEATQDAQRRNDCQNRYLSVIQSDLTKCLRQNSTDLLVFNPPYVPAEQVPD 133 Query: 183 LGLEVRDFDPR---ISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225 + + ++L GG DG+ R + D + L++ G+ + Sbjct: 134 RPSSNENDKSQWLDLALLGGEDGMVITRQVLDQLDTILSQQGVAYI 179 >gi|227513166|ref|ZP_03943215.1| methyltransferase [Lactobacillus buchneri ATCC 11577] gi|227083547|gb|EEI18859.1| methyltransferase [Lactobacillus buchneri ATCC 11577] Length = 250 Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust. Identities = 32/117 (27%), Positives = 53/117 (45%), Gaps = 11/117 (9%) Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 NV + S+D F +D+ L ++ + V I+DL +G GAV L L E+ Sbjct: 18 NVSIIQSNDVFS------FSLDAVLLAEFAQVGSKRVKNIIDLCSGNGAVGLFLSSETS- 70 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPY 174 + V+I K ++A + N + + + D ++ + DVIV NPPY Sbjct: 71 AQITMVEIQEKLADMAARSIQLNHLENQVHVVNDDLKNTTHYISKDSVDVIVCNPPY 127 >gi|190892563|ref|YP_001979105.1| ribosomal protein L11 methyltransferase [Rhizobium etli CIAT 652] gi|226710103|sp|B3PTU0|PRMA_RHIE6 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11 Mtase gi|190697842|gb|ACE91927.1| ribosomal protein L11 methyltransferase protein [Rhizobium etli CIAT 652] Length = 292 Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust. Identities = 26/76 (34%), Positives = 37/76 (48%), Gaps = 9/76 (11%) Query: 102 LDLGTGTGAVCLAL--LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 LDLGTG+G + +A+ LK P DI A +A N NG++ T + F Sbjct: 156 LDLGTGSGVLAIAVRKLKNIPVL---ATDIDPIATRVAAENVRRNGIASGIVTRTAPGFH 212 Query: 160 SV----EGLFDVIVSN 171 S G FD+I++N Sbjct: 213 STAFSEHGPFDLIIAN 228 >gi|189424062|ref|YP_001951239.1| ribosomal protein L11 methyltransferase [Geobacter lovleyi SZ] gi|226710087|sp|B3E5Z5|PRMA_GEOLS RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11 Mtase gi|189420321|gb|ACD94719.1| ribosomal protein L11 methyltransferase [Geobacter lovleyi SZ] Length = 305 Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 36/61 (59%), Gaps = 1/61 (1%) Query: 90 LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 +P E+ + ++ILDLGTG+G + +A K + VDI +A+ +A+ N N V++R Sbjct: 161 VPPPEQLEQIKILDLGTGSGILAIAAAKLG-ALQIDAVDIDPQAVIVAEENCALNKVADR 219 Query: 150 F 150 Sbjct: 220 I 220 >gi|326789431|ref|YP_004307252.1| methyltransferase type 11 [Clostridium lentocellum DSM 5427] gi|326540195|gb|ADZ82054.1| Methyltransferase type 11 [Clostridium lentocellum DSM 5427] Length = 205 Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust. Identities = 19/56 (33%), Positives = 33/56 (58%), Gaps = 5/56 (8%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 +LD+G GTG++ +L P K VGVD S + L++A+ + + +R + +Q D Sbjct: 47 VLDVGCGTGSLLYEILDRKPQVKAVGVDFSEEMLKVAR-----DKLPKRVELIQGD 97 >gi|328850496|gb|EGF99660.1| hypothetical protein MELLADRAFT_40156 [Melampsora larici-populina 98AG31] Length = 222 Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust. Identities = 42/174 (24%), Positives = 82/174 (47%), Gaps = 12/174 (6%) Query: 70 DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL---ALLKESPFFKGVG 126 D +EP +T +L+D AL L ++ + +++G+G+G V + +L P + Sbjct: 17 DVYEPAEDTFILLD-ALEADLDFLKALRPLICVEIGSGSGCVSVFAQKILSGIPTLH-IC 74 Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVDCLG 184 DI+ KAL + S N +S + +++ +S+ + D+++ NPPY+E+ + Sbjct: 75 TDINAKALTVTNSTFQKNSLSTP-NLVRTSLLNSLRLQSSVDLLLFNPPYVETSTEEY-- 131 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL--NKDGLCSVEIGYNQKVDVV 236 + S GG +G+ + D + L N+ L V I N+ ++V Sbjct: 132 EQATQGHIEASWAGGANGMELTNQLLDSLPSILSPNRGVLYLVAIKQNKPEEIV 185 >gi|322370432|ref|ZP_08044990.1| N-methylhydantoinase (ATP-hydrolyzing) B [Haladaptatus paucihalophilus DX253] gi|320549849|gb|EFW91505.1| N-methylhydantoinase (ATP-hydrolyzing) B [Haladaptatus paucihalophilus DX253] Length = 543 Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust. Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 1/57 (1%) Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV-VRIFESRKLFLVNAF 250 S DGG DG ++Y TIA G KDG+ V++G ++ V E+ V + Sbjct: 378 SRDGGDDGFTYYETIAGGFGGRPTKDGMDGVQVGMTNTLNTPVESLEAEYPLFVEEY 434 >gi|312867831|ref|ZP_07728036.1| conserved hypothetical protein [Streptococcus parasanguinis F0405] gi|311096586|gb|EFQ54825.1| conserved hypothetical protein [Streptococcus parasanguinis F0405] Length = 385 Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust. Identities = 25/59 (42%), Positives = 30/59 (50%), Gaps = 13/59 (22%) Query: 125 VGVDISCKALEIAKSNAVTNGVSE-------RFDTLQSDWFSSVEGLFDVIVSNPPYIE 176 +G DI + +EIAK NA GVS R L SD + G VI+SNPPY E Sbjct: 260 MGTDIDARMVEIAKENAQKAGVSSDITFKQMRVQDLHSD---KING---VIISNPPYGE 312 >gi|218509181|ref|ZP_03507059.1| ribosomal protein L11 methyltransferase [Rhizobium etli Brasil 5] Length = 211 Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust. Identities = 26/76 (34%), Positives = 37/76 (48%), Gaps = 9/76 (11%) Query: 102 LDLGTGTGAVCLAL--LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 LDLGTG+G + +A+ LK P DI A +A N NG++ T + F Sbjct: 75 LDLGTGSGVLAIAVRKLKNIPVLA---TDIDPIATRVAAENIRRNGIASGIVTRTAPGFH 131 Query: 160 SV----EGLFDVIVSN 171 S G FD+I++N Sbjct: 132 STAFSEHGPFDLIIAN 147 >gi|205374266|ref|ZP_03227065.1| hypothetical protein Bcoam_14119 [Bacillus coahuilensis m4-4] Length = 245 Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust. Identities = 48/163 (29%), Positives = 70/163 (42%), Gaps = 31/163 (19%) Query: 83 DSALAFSLPRIEKRDVV--RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140 D L+F+ ++E D+ ILDL GTG + + KE GVD+S L +AK Sbjct: 20 DLWLSFTKSKVENGDLKGKAILDLACGTGEMSIRFAKEG--MNVTGVDLSETMLMVAKDK 77 Query: 141 AVTNGVSERFDTLQSDWFSSVEGL--FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG 198 TN + D Q D +EGL FD++V + D L L G Sbjct: 78 --TNEANVSVDYYQQD-MKELEGLSEFDLVV--------LYCDSLNY----------LSG 116 Query: 199 GIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 D L+ ++ I D HL G+ ++ KVD + I +S Sbjct: 117 PKDVLATFKRIYD----HLKPGGMLLFDVHSPFKVDELFIDQS 155 >gi|257059901|ref|YP_003137789.1| methyltransferase type 12 [Cyanothece sp. PCC 8802] gi|256590067|gb|ACV00954.1| Methyltransferase type 12 [Cyanothece sp. PCC 8802] Length = 441 Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust. Identities = 17/45 (37%), Positives = 29/45 (64%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145 ILD+ G+G L+L + +P K +G+DIS +LE+A++ +G Sbjct: 62 ILDVACGSGYTTLSLAEANPGAKIIGIDISQASLEMAEARLKYHG 106 >gi|146281500|ref|YP_001171653.1| ribosomal RNA small subunit methyltransferase C [Pseudomonas stutzeri A1501] gi|226712968|sp|A4VIL0|RSMC_PSEU5 RecName: Full=Ribosomal RNA small subunit methyltransferase C; AltName: Full=16S rRNA m2G1207 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rsmC gi|145569705|gb|ABP78811.1| ribosomal RNA small subunit methyltransferase C [Pseudomonas stutzeri A1501] Length = 332 Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust. Identities = 21/79 (26%), Positives = 37/79 (46%), Gaps = 2/79 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+LD G G G + L + P + V +D+ A+E ++ NG+ + + D Sbjct: 194 RLLDFGCGAGILGATLKRRYPQSELVLLDVDAFAVESSRRTLAANGLEA--EVIAGDGID 251 Query: 160 SVEGLFDVIVSNPPYIESV 178 + I+SNPP+ + V Sbjct: 252 AAPRQLAAIISNPPFHQGV 270 >gi|75674847|ref|YP_317268.1| hypothetical protein Nwi_0650 [Nitrobacter winogradskyi Nb-255] gi|74419717|gb|ABA03916.1| hypothetical protein Nwi_0650 [Nitrobacter winogradskyi Nb-255] Length = 272 Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust. Identities = 26/94 (27%), Positives = 43/94 (45%), Gaps = 2/94 (2%) Query: 57 WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLAL 115 WRD+ + T T R L +D ALA + D +L++G G G C L Sbjct: 10 WRDWASKFGTAIGATTRTRTAKMLEID-ALARRMSMFGLGDAPAHVLEVGCGNGLNCFGL 68 Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 + P + G+D + + ++ A+ AV +G +R Sbjct: 69 AAQFPRMQLDGIDYTAEMIDAAREAAVASGFQDR 102 >gi|125974030|ref|YP_001037940.1| SAM-dependent methyltransferase [Clostridium thermocellum ATCC 27405] gi|125714255|gb|ABN52747.1| SAM-dependent methyltransferase [Clostridium thermocellum ATCC 27405] Length = 409 Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust. Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 10/82 (12%) Query: 100 RILDLGTGTGAVCL-ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 R+LD T TG+ L A L + VDIS A+++AK+NAV NG+ + D + D F Sbjct: 236 RVLDCFTHTGSFGLNAALGGAEHV--TCVDISQSAIDMAKANAVRNGLDGKMDFVCEDVF 293 Query: 159 SSVEGL-------FDVIVSNPP 173 + L +D I+ +PP Sbjct: 294 DLLTKLAEQKCHDYDYIILDPP 315 >gi|332289602|ref|YP_004420454.1| ribosomal protein L11 methyltransferase [Gallibacterium anatis UMN179] gi|330432498|gb|AEC17557.1| ribosomal protein L11 methyltransferase [Gallibacterium anatis UMN179] Length = 293 Score = 37.0 bits (84), Expect = 3.1, Method: Compositional matrix adjust. Identities = 23/72 (31%), Positives = 42/72 (58%), Gaps = 4/72 (5%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159 ++D G G+G + +A LK +G+DI +A++ ++ NA NGV +R L +D + Sbjct: 162 VIDFGCGSGILAIAALKLGAK-NAIGIDIDPQAIQASRENAKRNGVEDRLQLYLSADTPN 220 Query: 160 SVEGLFDVIVSN 171 ++ DV+V+N Sbjct: 221 DLKA--DVVVAN 230 >gi|261879348|ref|ZP_06005775.1| TrmA family RNA methyltransferase [Prevotella bergensis DSM 17361] gi|270333911|gb|EFA44697.1| TrmA family RNA methyltransferase [Prevotella bergensis DSM 17361] Length = 489 Score = 37.0 bits (84), Expect = 3.1, Method: Compositional matrix adjust. Identities = 23/79 (29%), Positives = 42/79 (53%), Gaps = 8/79 (10%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER------FDTLQ 154 I DL TGTG + + K++ + +G++ +A+E A+ N+ NG+ + Sbjct: 344 IYDLYTGTGTIANFVAKKAS--QVIGIEFVPEAIEDAQVNSRINGIENTQFFAGDMKNVL 401 Query: 155 SDWFSSVEGLFDVIVSNPP 173 +D F S G D+I+++PP Sbjct: 402 TDDFISEHGCPDIIITDPP 420 >gi|269118833|ref|YP_003307010.1| methyltransferase type 12 [Sebaldella termitidis ATCC 33386] gi|268612711|gb|ACZ07079.1| Methyltransferase type 12 [Sebaldella termitidis ATCC 33386] Length = 233 Score = 37.0 bits (84), Expect = 3.1, Method: Compositional matrix adjust. Identities = 40/141 (28%), Positives = 59/141 (41%), Gaps = 25/141 (17%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE------------ 148 +LDLG GTG + LK+ F +GVDIS LEIA+ + E Sbjct: 35 VLDLGCGTGEFLVKFLKDG--FTCIGVDISEVMLEIARDKTKESSDIELYQGDIRKFRTE 92 Query: 149 --------RFDTLQS-DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRD--FDPRISLD 197 FDT+ D FS +E D N +I D + E+ D F+ + LD Sbjct: 93 KPAEYIVCNFDTVNYFDKFSDLEDFLDCSYENLTEDGILIFDVVTEEIFDEMFENGVFLD 152 Query: 198 GGIDGLSHYRTIADGVSRHLN 218 + L+ +R +G + +N Sbjct: 153 EKENYLTIWRYDKEGENYIIN 173 >gi|227822675|ref|YP_002826647.1| transcriptional regulator, ArsR family [Sinorhizobium fredii NGR234] gi|227341676|gb|ACP25894.1| transcriptional regulator, ArsR family [Sinorhizobium fredii NGR234] Length = 339 Score = 37.0 bits (84), Expect = 3.1, Method: Compositional matrix adjust. Identities = 20/48 (41%), Positives = 30/48 (62%), Gaps = 2/48 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148 +LDLGTGTG + L E + +G+GVD S L +A+SN G+++ Sbjct: 160 LLDLGTGTGRILQ--LFEGLYRRGIGVDASRDMLAVARSNLDRAGITK 205 >gi|254518706|ref|ZP_05130762.1| conserved hypothetical protein [Clostridium sp. 7_2_43FAA] gi|226912455|gb|EEH97656.1| conserved hypothetical protein [Clostridium sp. 7_2_43FAA] Length = 385 Score = 37.0 bits (84), Expect = 3.1, Method: Compositional matrix adjust. Identities = 23/56 (41%), Positives = 34/56 (60%), Gaps = 3/56 (5%) Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW--FSSVEGLFDVIVSNPPYIE 176 K +G DI + L++A+SNA GVS+ + + D+ FS+ + IVSNPPY E Sbjct: 252 KLIGYDIDGRILKVARSNAEKAGVSKYIEFQRRDFKDFSN-SNKYGFIVSNPPYGE 306 >gi|167044872|gb|ABZ09539.1| hypothetical protein ALOHA_HF4000APKG8D22ctg14g9 [uncultured marine crenarchaeote HF4000_APKG8D22] Length = 176 Score = 37.0 bits (84), Expect = 3.1, Method: Compositional matrix adjust. Identities = 40/135 (29%), Positives = 58/135 (42%), Gaps = 29/135 (21%) Query: 69 SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128 ++++ P +T L D + EK + LD+GTG+G LA L E F VG D Sbjct: 4 AESYPPSEDTFFLADYI------KNEKGEFA--LDIGTGSGY--LAALLEKSFSLVVGTD 53 Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVR 188 +S L+ K D L FD+++ N PY+++ E+ Sbjct: 54 LSFNVLKKQKYFTTNTVCCNGADALNQQ--------FDLVICNMPYLKTD-------EIL 98 Query: 189 DFDPRISLDGGIDGL 203 D IS DGG DGL Sbjct: 99 D----ISTDGGRDGL 109 >gi|59711052|ref|YP_203828.1| S-adenosyl-L-methionine-dependent methyltransferase [Vibrio fischeri ES114] gi|75354570|sp|Q5E7Q6|TRMN6_VIBF1 RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName: Full=tRNA m6A37 methyltransferase gi|59479153|gb|AAW84940.1| predicted S-adenosyl-L-methionine-dependent methyltransferase [Vibrio fischeri ES114] Length = 234 Score = 37.0 bits (84), Expect = 3.1, Method: Compositional matrix adjust. Identities = 21/83 (25%), Positives = 39/83 (46%), Gaps = 1/83 (1%) Query: 96 RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155 R +ILD+G GTG + L + + +++ A ++A+ N + ER + Sbjct: 35 RACSQILDIGAGTGLLSLMSAQRNSDAHIDAIELMPIAADVARLNFYQSPWKERLTLIHH 94 Query: 156 DWFS-SVEGLFDVIVSNPPYIES 177 D+ + +D I+ NPPY + Sbjct: 95 DFLTYQAPHKYDAIICNPPYFNN 117 >gi|317491009|ref|ZP_07949445.1| hypothetical protein HMPREF0864_00208 [Enterobacteriaceae bacterium 9_2_54FAA] gi|316920556|gb|EFV41879.1| hypothetical protein HMPREF0864_00208 [Enterobacteriaceae bacterium 9_2_54FAA] Length = 249 Score = 37.0 bits (84), Expect = 3.1, Method: Compositional matrix adjust. Identities = 33/105 (31%), Positives = 52/105 (49%), Gaps = 7/105 (6%) Query: 75 RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKA 133 R E ++ DS L S I D +ILD+GTG+G + L L + + + V++ A Sbjct: 27 RCEMKVGTDSILLGSWTDISNLDG-KILDIGTGSGLLALMLAQRTTDVVQIDAVELDQNA 85 Query: 134 LEIAKSNAVTNGVSERFD----TLQSDWFSSVEGLFDVIVSNPPY 174 A N V + + R +LQ+ + + +D+IVSNPPY Sbjct: 86 ATQAAENFVLSPWANRMRVHTCSLQA-FAAQTSERYDLIVSNPPY 129 >gi|288925116|ref|ZP_06419052.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Prevotella buccae D17] gi|288338306|gb|EFC76656.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Prevotella buccae D17] Length = 480 Score = 37.0 bits (84), Expect = 3.1, Method: Compositional matrix adjust. Identities = 23/79 (29%), Positives = 41/79 (51%), Gaps = 8/79 (10%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER------FDTLQ 154 + DL TGTG + + +E+ + +G++ +A+E AK N+ NG+ + Sbjct: 337 VYDLYTGTGTIANFVAREAK--QVIGIEYVPEAIEDAKVNSEINGIDNTLFYAGDMKDIL 394 Query: 155 SDWFSSVEGLFDVIVSNPP 173 +D F G DVI+++PP Sbjct: 395 NDEFIRQHGRPDVIITDPP 413 >gi|269123365|ref|YP_003305942.1| Methyltransferase type 11 [Streptobacillus moniliformis DSM 12112] gi|268314691|gb|ACZ01065.1| Methyltransferase type 11 [Streptobacillus moniliformis DSM 12112] Length = 220 Score = 37.0 bits (84), Expect = 3.1, Method: Compositional matrix adjust. Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 3/60 (5%) Query: 80 LLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKS 139 L+++ L F L K + +++LDLG GTG + KE V VDIS +EIA+S Sbjct: 2 LIINHGLNF-LKSFSKGNKLKVLDLGCGTGTIASMFSKEGH--DVVAVDISSDMIEIAQS 58 >gi|227499799|ref|ZP_03929894.1| possible methyltransferase [Anaerococcus tetradius ATCC 35098] gi|227218103|gb|EEI83371.1| possible methyltransferase [Anaerococcus tetradius ATCC 35098] Length = 233 Score = 37.0 bits (84), Expect = 3.1, Method: Compositional matrix adjust. Identities = 28/117 (23%), Positives = 53/117 (45%), Gaps = 10/117 (8%) Query: 67 LSSDTFEPRPETELL-VDSALAFSLPRIEKRDVVRI------LDLGTGTGAVCLALLKES 119 +S + PR +++ VD + +F + I D R+ LD+G G+G + + Sbjct: 1 MSKLDYIPRTNIKMIHVDKSYSFGVDSIILGDFARMKSNKVALDIGAGSGVLSFLINSRY 60 Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPY 174 K V+I + ++ + N NG+ + + + D + E D I++NPPY Sbjct: 61 KLEKVFAVEIQKEKAKLLEENIKLNGI-KNIELINEDLNKIIIKENSIDYIITNPPY 116 >gi|170783206|ref|YP_001711540.1| hypothetical protein CMS_2907 [Clavibacter michiganensis subsp. sepedonicus] gi|169157776|emb|CAQ02978.1| conserved hypothetical protein [Clavibacter michiganensis subsp. sepedonicus] Length = 249 Score = 37.0 bits (84), Expect = 3.1, Method: Compositional matrix adjust. Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 3/72 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD--WF 158 +LDLG G G+ L L+ P VGVD S + A G+S R + + +D + Sbjct: 39 VLDLGCGDGSWLLRALRLEPSLTAVGVDHSDAGFGRVREQAEREGLSNRLELVCADARLW 98 Query: 159 SSVEGLFDVIVS 170 +S +G FDV++S Sbjct: 99 TSYDG-FDVVLS 109 >gi|15669849|ref|NP_248663.1| hypothetical protein MJ_1653 [Methanocaldococcus jannaschii DSM 2661] gi|3334439|sp|Q59047|Y1653_METJA RecName: Full=Putative ribosomal RNA large subunit methyltransferase MJ1653 gi|1500554|gb|AAB99674.1| conserved hypothetical protein [Methanocaldococcus jannaschii DSM 2661] Length = 385 Score = 37.0 bits (84), Expect = 3.1, Method: Compositional matrix adjust. Identities = 25/82 (30%), Positives = 46/82 (56%), Gaps = 11/82 (13%) Query: 100 RILDLGTGTGAVCL-ALLKESPFFKGVGVDISCKALEIAKSNAVTNGV-SERFDTLQSDW 157 R+LD+ TG + A ++ + VGVD+S KAL++A+ N N + +R++ ++ + Sbjct: 215 RVLDICCYTGGFSVHAAIRGAEV---VGVDLSKKALKLAEENMELNNIPKDRYEFIEGNA 271 Query: 158 FSSVEGL------FDVIVSNPP 173 F +E FDV++ +PP Sbjct: 272 FKVMEEFIEDGEKFDVVILDPP 293 >gi|227824691|ref|ZP_03989523.1| 50S ribosomal protein L11 methyltransferase [Acidaminococcus sp. D21] gi|226905190|gb|EEH91108.1| 50S ribosomal protein L11 methyltransferase [Acidaminococcus sp. D21] Length = 313 Score = 37.0 bits (84), Expect = 3.1, Method: Compositional matrix adjust. Identities = 32/137 (23%), Positives = 64/137 (46%), Gaps = 25/137 (18%) Query: 57 WRDFYNV-----RLTLSSD--TFEPRPETELL-VDSALAFS----------LPRIEK--R 96 W+ +++ ++ + D ++ P E +++ +D +AF + R+E+ Sbjct: 115 WKQYFHTTKIGSQIVIKPDWESYTPTAEEKVIELDPGMAFGTGTHATTRMCIERLEELVT 174 Query: 97 DVVRILDLGTGTG--AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154 + + D+GTG+G A+ AL+ +DI KA+E+AK N N +S R + Sbjct: 175 PNIDVYDVGTGSGILAMTAALMGARSIH---AIDIDGKAVEVAKENIAKNHLSNRITVKK 231 Query: 155 SDWFSSVEGLFDVIVSN 171 + + D+IV+N Sbjct: 232 GNLLDDADEKADLIVAN 248 >gi|157960220|ref|YP_001500254.1| ribosomal protein L11 methyltransferase [Shewanella pealeana ATCC 700345] gi|189037704|sp|A8GZI2|PRMA_SHEPA RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11 Mtase gi|157845220|gb|ABV85719.1| ribosomal protein L11 methyltransferase [Shewanella pealeana ATCC 700345] Length = 293 Score = 37.0 bits (84), Expect = 3.1, Method: Compositional matrix adjust. Identities = 24/72 (33%), Positives = 41/72 (56%), Gaps = 4/72 (5%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159 ++D G G+G + +A LK + G+DI +A+E +K+NA NGV ++ L D Sbjct: 162 VIDFGCGSGILAVAALKLG-AERVTGIDIDYQAIEASKANAERNGVEDKLALYLPED--Q 218 Query: 160 SVEGLFDVIVSN 171 + L D++V+N Sbjct: 219 PADLLADILVAN 230 >gi|172056821|ref|YP_001813281.1| ribosomal protein L11 methyltransferase [Exiguobacterium sibiricum 255-15] gi|226710085|sp|B1YKT1|PRMA_EXIS2 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11 Mtase gi|171989342|gb|ACB60264.1| ribosomal protein L11 methyltransferase [Exiguobacterium sibiricum 255-15] Length = 315 Score = 37.0 bits (84), Expect = 3.1, Method: Compositional matrix adjust. Identities = 33/137 (24%), Positives = 63/137 (45%), Gaps = 25/137 (18%) Query: 57 WRDFY-------NVRLTLSSDTFEPRPETELL-VDSALAFS----------LPRIEK--R 96 W+ FY ++ + + + P+P+ +++ +D +AF + IE + Sbjct: 117 WKQFYKPVKISRHLTVVPMWEEYTPQPDEKIIELDPGMAFGTGTHPTTVLCIQAIENYLQ 176 Query: 97 DVVRILDLGTGTG--AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154 D R++D+GTG+G A+ A L F +D+ A+ A N N VS++ Q Sbjct: 177 DNDRVVDVGTGSGVLAIAAAKLGAKDVF---ALDLDEVAVRSATDNVALNKVSQQVTVRQ 233 Query: 155 SDWFSSVEGLFDVIVSN 171 D ++ ++IV+N Sbjct: 234 GDLMKELKEPVELIVAN 250 >gi|330504880|ref|YP_004381749.1| 16S rRNA m(2)G 1207 methyltransferase [Pseudomonas mendocina NK-01] gi|328919166|gb|AEB59997.1| 16S rRNA m(2)G 1207 methyltransferase [Pseudomonas mendocina NK-01] Length = 331 Score = 37.0 bits (84), Expect = 3.1, Method: Compositional matrix adjust. Identities = 31/100 (31%), Positives = 46/100 (46%), Gaps = 2/100 (2%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 +D A L +++ ILD G G G + AL + P + +D+ ALE ++ Sbjct: 176 LDRGSALLLEHLDELPNGHILDFGCGAGVLGAALKRRYPDSELSLLDVDAFALESSRLTL 235 Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181 NG+S S+ EGL IVSNPP+ + V D Sbjct: 236 ARNGLSANL-IAGIGIESAPEGL-SAIVSNPPFHQGVHTD 273 >gi|326472306|gb|EGD96315.1| hypothetical protein TESG_03768 [Trichophyton tonsurans CBS 112818] gi|326480519|gb|EGE04529.1| S-adenosylmethionine-dependentmethyltransferase [Trichophyton equinum CBS 127.97] Length = 370 Score = 37.0 bits (84), Expect = 3.1, Method: Compositional matrix adjust. Identities = 43/162 (26%), Positives = 64/162 (39%), Gaps = 36/162 (22%) Query: 49 ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVD--SALAFSLPRIEKRDVVRILDLGT 106 + + ILG + F ++ + PR +TE + + R+ +RI+D+ T Sbjct: 70 KPLQYILGDQPFGDLTILCKEGVLIPRQDTESYTTRIAQRLLAENRLNPTKSIRIIDVCT 129 Query: 107 GTGAVCLALLKES----PFFKGVGVDISCKALEIAKSN---AVTNGV------------- 146 GTG + L L P +GVDIS AL +AK N + NG Sbjct: 130 GTGCIPLLLHSLLASSIPTISIIGVDISATALSLAKKNLEYNIRNGTLLSRARDEIHFVH 189 Query: 147 -------------SERFDTLQSDWFSSVEGLFDVIVSNPPYI 175 SE L +GL D+++SNPPYI Sbjct: 190 ADILDPRYLESDGSELGKMLSRSNQGHSKGL-DLLISNPPYI 230 >gi|292386151|gb|ADE22330.1| O-methyltransferase [Streptomyces galbus] Length = 409 Score = 37.0 bits (84), Expect = 3.1, Method: Compositional matrix adjust. Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 1/59 (1%) Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 D+G G LAL++ P G +D+ A+E A+ A G+S+RF + D+F+ V Sbjct: 249 DVGGSNGDFVLALMEADPQLSGQVLDLP-HAVEGARGEAAKRGLSDRFHAVAGDFFAEV 306 >gi|295111256|emb|CBL28006.1| Methylase involved in ubiquinone/menaquinone biosynthesis [Synergistetes bacterium SGP1] Length = 217 Score = 37.0 bits (84), Expect = 3.1, Method: Compositional matrix adjust. Identities = 27/88 (30%), Positives = 38/88 (43%), Gaps = 7/88 (7%) Query: 100 RILDLGTGTGAVCLALLKESPFFKG-VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 R LDLG G G + AL + SP VG DIS LE A+ A F D Sbjct: 52 RALDLGCGPGGLSYALAETSPASASIVGADISDDQLECARRGAGAFACKVEFLKASMDEL 111 Query: 159 SSVEGLFDVIVSN------PPYIESVIV 180 +G FD+++++ PP + + Sbjct: 112 PFPDGHFDLVMTSMALHETPPAVRRAAI 139 >gi|260888376|ref|ZP_05899639.1| SAM-dependent methyltransferase [Selenomonas sputigena ATCC 35185] gi|330838309|ref|YP_004412889.1| Methyltransferase type 11 [Selenomonas sputigena ATCC 35185] gi|260861912|gb|EEX76412.1| SAM-dependent methyltransferase [Selenomonas sputigena ATCC 35185] gi|329746073|gb|AEB99429.1| Methyltransferase type 11 [Selenomonas sputigena ATCC 35185] Length = 285 Score = 37.0 bits (84), Expect = 3.1, Method: Compositional matrix adjust. Identities = 32/110 (29%), Positives = 52/110 (47%), Gaps = 14/110 (12%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDI-----SCKALEIAKSNAVTNGVSER----F 150 RILD+G G+GA+ +A K +P + +GVD+ + + I + NA GV+ Sbjct: 120 RILDVGCGSGALTIACAKGNPACQAIGVDLWRGVYASFSQRICEENAAAEGVTNTEFRPG 179 Query: 151 DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200 D L+ D+ FD + SN Y+ I G + + R+ GG+ Sbjct: 180 DALKLDFPDES---FDAVTSN--YVYHNIPKISGQTMLEETLRVLKKGGV 224 >gi|227524381|ref|ZP_03954430.1| methyltransferase [Lactobacillus hilgardii ATCC 8290] gi|227088612|gb|EEI23924.1| methyltransferase [Lactobacillus hilgardii ATCC 8290] Length = 250 Score = 37.0 bits (84), Expect = 3.1, Method: Compositional matrix adjust. Identities = 32/117 (27%), Positives = 53/117 (45%), Gaps = 11/117 (9%) Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 NV + S+D F +D+ L ++ + V I+DL +G GAV L L E+ Sbjct: 18 NVSIIQSNDVFS------FSLDAVLLAEFAQVGSKRVKNIIDLCSGNGAVGLFLSSETS- 70 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPY 174 + V+I K ++A + N + + + D ++ + DVIV NPPY Sbjct: 71 AQITMVEIQEKLADMAARSIQLNHLENQVHVVNDDLKNTTHYISKDSVDVIVCNPPY 127 >gi|48477790|ref|YP_023496.1| ribosomal protein L11 methyltransferase [Picrophilus torridus DSM 9790] gi|48430438|gb|AAT43303.1| ribosomal protein L11 methyltransferase [Picrophilus torridus DSM 9790] Length = 204 Score = 37.0 bits (84), Expect = 3.1, Method: Compositional matrix adjust. Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 8/77 (10%) Query: 100 RILDLGTGTG--AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 R+ DLG G G A+ +L+ + G DI + +E++ N G S RF + Sbjct: 57 RVADLGCGYGVFAIGASLMGA---LESKGFDIDQEMIELSVKNNEIAGASARFFNMD--- 110 Query: 158 FSSVEGLFDVIVSNPPY 174 S ++ FD ++ NPP+ Sbjct: 111 VSKIDETFDTVIMNPPF 127 >gi|320593845|gb|EFX06248.1| ubiE/COQ5 methyltransferase [Grosmannia clavigera kw1407] Length = 264 Score = 37.0 bits (84), Expect = 3.2, Method: Compositional matrix adjust. Identities = 23/61 (37%), Positives = 31/61 (50%), Gaps = 2/61 (3%) Query: 87 AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146 AF LP + K D ILD+G G G++ + P VGVDIS + L A A G+ Sbjct: 10 AFLLPHLRKTD--HILDVGCGPGSITAGFAQYVPEGTVVGVDISAEVLARATQRAAELGL 67 Query: 147 S 147 + Sbjct: 68 A 68 >gi|332162700|ref|YP_004299277.1| hypothetical protein YE105_C3080 [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|318606805|emb|CBY28303.1| putative O-methyltransferase [Yersinia enterocolitica subsp. palearctica Y11] gi|325666930|gb|ADZ43574.1| hypothetical protein YE105_C3080 [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330860493|emb|CBX70797.1| uncharacterized protein yfiC [Yersinia enterocolitica W22703] Length = 248 Score = 37.0 bits (84), Expect = 3.2, Method: Compositional matrix adjust. Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 4/85 (4%) Query: 100 RILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 ++LD+G G+G + L + + S P GV++ +A + A SNA + +ER Q D Sbjct: 50 KVLDIGCGSGLIALMIAQRSTPEVMIDGVELEPEAAQQASSNAAQSPWAERVHIYQQDVH 109 Query: 159 SSVEG---LFDVIVSNPPYIESVIV 180 E +D+IVSNPPY + Sbjct: 110 QFAENHLHQYDLIVSNPPYFAPAVA 134 >gi|290958521|ref|YP_003489703.1| ribonucleotide methyltransferase [Streptomyces scabiei 87.22] gi|260648047|emb|CBG71155.1| putative ribonucleotide methyltransferase [Streptomyces scabiei 87.22] Length = 510 Score = 37.0 bits (84), Expect = 3.2, Method: Compositional matrix adjust. Identities = 37/125 (29%), Positives = 52/125 (41%), Gaps = 16/125 (12%) Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 LDLGTG+G L + + + D++ +AL I +GV D Q F V Sbjct: 172 LDLGTGSGIQALHATRHA--TRVTATDLNPRALHITALTLALSGVPA-ADLRQGSLFEPV 228 Query: 162 EG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 +D++VSNPP+ VI L R DGG+ G RT+ LN+ Sbjct: 229 RADERYDLVVSNPPF---VISPGARLTYR--------DGGMGGDDLCRTLVAQSGERLNE 277 Query: 220 DGLCS 224 G Sbjct: 278 GGFAQ 282 >gi|160889893|ref|ZP_02070896.1| hypothetical protein BACUNI_02324 [Bacteroides uniformis ATCC 8492] gi|156860885|gb|EDO54316.1| hypothetical protein BACUNI_02324 [Bacteroides uniformis ATCC 8492] Length = 473 Score = 37.0 bits (84), Expect = 3.2, Method: Compositional matrix adjust. Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 10/80 (12%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF-------DTL 153 + DL TGTG + + K + + +G++ +A+E AK NA NG+ D L Sbjct: 329 VYDLYTGTGTIANFVSKHAR--QVIGIEYVPEAIEDAKVNAEINGIKNTLFFAGDMKDML 386 Query: 154 QSDWFSSVEGLFDVIVSNPP 173 D+ + G DVI+++PP Sbjct: 387 TQDFINQY-GRPDVIITDPP 405 >gi|110668385|ref|YP_658196.1| fumarate hydratase [Haloquadratum walsbyi DSM 16790] gi|109626132|emb|CAJ52586.1| fumarate hydratase [Haloquadratum walsbyi DSM 16790] Length = 484 Score = 37.0 bits (84), Expect = 3.2, Method: Compositional matrix adjust. Identities = 28/101 (27%), Positives = 44/101 (43%), Gaps = 9/101 (8%) Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEV 187 D+ A+ IA AVT + DTL+S+ S E DVI + +++ LG E Sbjct: 142 DVIPTAMHIAADEAVTKDLLPALDTLESELASQAEAFDDVIKTGRTHLQDATPISLGQEF 201 Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228 + +I G+S T+ D HL++ L +G Sbjct: 202 DGYKTQIQ-----KGISRVETVTD----HLSELALGGTAVG 233 >gi|332686355|ref|YP_004456129.1| putative O-methyltransferase [Melissococcus plutonius ATCC 35311] gi|332370364|dbj|BAK21320.1| predicted O-methyltransferase [Melissococcus plutonius ATCC 35311] Length = 243 Score = 37.0 bits (84), Expect = 3.2, Method: Compositional matrix adjust. Identities = 39/173 (22%), Positives = 79/173 (45%), Gaps = 23/173 (13%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES--PFFKGVGVDISCKALEIAKS 139 +D+ L + PR+ K+ RI+DL G GAV L + K++ P + +++ + ++ K Sbjct: 29 LDAVLLANFPRLPKKG--RIVDLCAGNGAVGLFISKKTKAPI---IQIELQSRLADMGKR 83 Query: 140 NAVTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195 + N + ++ D ++ + D++V NPPY + + +P I Sbjct: 84 SIQLNHLEQQLTMHTLDLKNATSVIKKDSVDLVVCNPPYFKEQTMS-------QKNPNIH 136 Query: 196 LDGGIDGLSHYRTIADGV---SRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245 L I Y T+ + + S+ L +G ++ N+ +D++ IFE + Sbjct: 137 L--AIARHEIYTTLEEVIHVSSQLLKTNGRLAMVHRPNRFLDLLNIFEKENII 187 >gi|288555661|ref|YP_003427596.1| hypothetical protein BpOF4_13265 [Bacillus pseudofirmus OF4] gi|288546821|gb|ADC50704.1| hypothetical protein BpOF4_13265 [Bacillus pseudofirmus OF4] Length = 250 Score = 37.0 bits (84), Expect = 3.2, Method: Compositional matrix adjust. Identities = 19/49 (38%), Positives = 30/49 (61%), Gaps = 2/49 (4%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147 ++ILD+G GTG + L++L E GVD+S + L +A+ + GVS Sbjct: 38 IQILDVGCGTGELLLSMLDEGA--DVTGVDLSSEMLVVARDKCMKKGVS 84 >gi|116751314|ref|YP_848001.1| 50S ribosomal protein L11 methyltransferase [Syntrophobacter fumaroxidans MPOB] gi|166223498|sp|A0LQ64|PRMA_SYNFM RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11 Mtase gi|116700378|gb|ABK19566.1| LSU ribosomal protein L11P methyltransferase [Syntrophobacter fumaroxidans MPOB] Length = 290 Score = 37.0 bits (84), Expect = 3.2, Method: Compositional matrix adjust. Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 6/73 (8%) Query: 101 ILDLGTGTG--AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 +LD+GTG+G AV ALL P VD +A+E+A N NG+ + L Sbjct: 158 LLDVGTGSGILAVAAALLGFHPV---QAVDDDPEAVEVAAENIALNGMESAIELLAGT-A 213 Query: 159 SSVEGLFDVIVSN 171 G FDV+++N Sbjct: 214 RQASGAFDVVIAN 226 >gi|309379478|emb|CBX21844.1| unnamed protein product [Neisseria lactamica Y92-1009] Length = 295 Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust. Identities = 27/74 (36%), Positives = 38/74 (51%), Gaps = 11/74 (14%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDW 157 +LD G G+G + +A LK VGVDI +A+ + NA N V +F + L S Sbjct: 167 VLDYGCGSGILTIAALKLGAGST-VGVDIDEQAVRAGRDNAAQNNVDAQFYLPEQLPS-- 223 Query: 158 FSSVEGLFDVIVSN 171 G FDV+V+N Sbjct: 224 -----GQFDVVVAN 232 >gi|293391551|ref|ZP_06635885.1| ribosomal protein L11 methyltransferase [Aggregatibacter actinomycetemcomitans D7S-1] gi|290952085|gb|EFE02204.1| ribosomal protein L11 methyltransferase [Aggregatibacter actinomycetemcomitans D7S-1] Length = 294 Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust. Identities = 20/56 (35%), Positives = 33/56 (58%), Gaps = 1/56 (1%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 ++D G G+G + +A LK VG+DI +A+ +++NA NGV++R SD Sbjct: 162 VIDFGCGSGILAIAALKLGAK-SAVGIDIDPQAILASRNNAEQNGVADRLQLCLSD 216 >gi|262198876|ref|YP_003270085.1| ubiquinone/menaquinone biosynthesis methyltransferase [Haliangium ochraceum DSM 14365] gi|262082223|gb|ACY18192.1| ubiquinone/menaquinone biosynthesis methyltransferase [Haliangium ochraceum DSM 14365] Length = 269 Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust. Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 9/78 (11%) Query: 81 LVDSALAFSLPRIEKRDVV---------RILDLGTGTGAVCLALLKESPFFKGVGVDISC 131 L++ ++F + R +R V R+LDL TGT V +++ + P + VGVD S Sbjct: 42 LLNRVMSFGMDRRWRRKTVEALELGPGARVLDLATGTADVAMSIARSHPECEVVGVDPSA 101 Query: 132 KALEIAKSNAVTNGVSER 149 L+I + + + +R Sbjct: 102 GMLDIGREKIASEQLEDR 119 >gi|256004628|ref|ZP_05429605.1| putative RNA methylase [Clostridium thermocellum DSM 2360] gi|255991363|gb|EEU01468.1| putative RNA methylase [Clostridium thermocellum DSM 2360] gi|316941278|gb|ADU75312.1| SAM-dependent methyltransferase [Clostridium thermocellum DSM 1313] Length = 409 Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust. Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 10/82 (12%) Query: 100 RILDLGTGTGAVCL-ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 R+LD T TG+ L A L + VDIS A+++AK+NAV NG+ + D + D F Sbjct: 236 RVLDCFTHTGSFGLNAALGGAEHV--TCVDISQSAIDMAKANAVRNGLDGKMDFVCEDVF 293 Query: 159 SSVEGL-------FDVIVSNPP 173 + L +D I+ +PP Sbjct: 294 DLLTKLAEQKCHDYDYIILDPP 315 >gi|209694152|ref|YP_002262080.1| hypothetical protein VSAL_I0559 [Aliivibrio salmonicida LFI1238] gi|262827863|sp|B6EMW5|TRMN6_ALISL RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName: Full=tRNA m6A37 methyltransferase gi|208008103|emb|CAQ78244.1| conserved hypothetical protein [Aliivibrio salmonicida LFI1238] Length = 234 Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust. Identities = 27/97 (27%), Positives = 41/97 (42%), Gaps = 3/97 (3%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 D L + IE+ ILD+G GTG + L + + V++ A E+A N Sbjct: 23 TDGVLLGAWANIEQSK--NILDIGCGTGLLSLMSAQRNENSHVDAVELMPLAAEVALQNF 80 Query: 142 VTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIES 177 V + R + D L+D I+ NPPY + Sbjct: 81 VQSPWKNRLHLIHQDILHYHPAHLYDAIICNPPYFNN 117 >gi|153955234|ref|YP_001395999.1| methyltransferase [Clostridium kluyveri DSM 555] gi|219855660|ref|YP_002472782.1| hypothetical protein CKR_2317 [Clostridium kluyveri NBRC 12016] gi|146348092|gb|EDK34628.1| Predicted methyltransferase [Clostridium kluyveri DSM 555] gi|219569384|dbj|BAH07368.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 246 Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust. Identities = 28/72 (38%), Positives = 37/72 (51%), Gaps = 3/72 (4%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+LDLG G G C+ + E VGVDIS K LE+AK V + ++ F Sbjct: 45 RVLDLGCGYGWHCIYAM-EHGASSVVGVDISHKMLEVAKEKTHFPQVEYKCCAIEDVEFP 103 Query: 160 SVEGLFDVIVSN 171 E FDVI+S+ Sbjct: 104 --EESFDVILSS 113 >gi|308813696|ref|XP_003084154.1| predicted serine-pyruvate aminotransferase (ISS) [Ostreococcus tauri] gi|116056037|emb|CAL58570.1| predicted serine-pyruvate aminotransferase (ISS) [Ostreococcus tauri] Length = 868 Score = 36.6 bits (83), Expect = 3.2, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 8/56 (14%) Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWF--------SSVEGLFDVIVSNPP 173 VD S AL +A NA NGV+++ + +++D F S G +DV++ +PP Sbjct: 718 AVDSSESALAVAAQNAELNGVADKIEFVRADAFDFMQDALDSGAAGSYDVVILDPP 773 >gi|319404565|emb|CBI78171.1| 3-demethylubiquinone-9 3-methyltransferase [Bartonella rochalimae ATCC BAA-1498] Length = 247 Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust. Identities = 23/81 (28%), Positives = 45/81 (55%), Gaps = 3/81 (3%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 ++ILD+G G G +C + + +G D + +E+AK +A+ +G+S + T ++ Sbjct: 66 LKILDIGCGGGLLCEPMARLGATV--IGADAAQTNIEVAKIHAIQSGLSINYRTTTAEAL 123 Query: 159 SSVEGLFDVIVSNPPYIESVI 179 ++ FDVI+ N +E V+ Sbjct: 124 ANEGEQFDVIL-NMEVVEHVV 143 >gi|121535706|ref|ZP_01667510.1| protein of unknown function Met10 [Thermosinus carboxydivorans Nor1] gi|121305737|gb|EAX46675.1| protein of unknown function Met10 [Thermosinus carboxydivorans Nor1] Length = 393 Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust. Identities = 18/54 (33%), Positives = 32/54 (59%), Gaps = 6/54 (11%) Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPP 173 +DIS A+E+A+ NA NGV++R ++ F ++ L FD+++ +PP Sbjct: 246 AIDISEMAIELARKNAALNGVADRCSFEVANAFDALRELSDERRQFDIVILDPP 299 >gi|222055152|ref|YP_002537514.1| methyltransferase type 11 [Geobacter sp. FRC-32] gi|221564441|gb|ACM20413.1| Methyltransferase type 11 [Geobacter sp. FRC-32] Length = 275 Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust. Identities = 18/47 (38%), Positives = 25/47 (53%) Query: 97 DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143 + + ILD+ TGTG + L L + P + GVD S L A+ A T Sbjct: 48 EAIHILDVATGTGNMALTLARRMPRARITGVDFSAAMLAQAREKAQT 94 >gi|323137210|ref|ZP_08072289.1| Methyltransferase type 11 [Methylocystis sp. ATCC 49242] gi|322397568|gb|EFY00091.1| Methyltransferase type 11 [Methylocystis sp. ATCC 49242] Length = 242 Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust. Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 4/74 (5%) Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 ++G GTG LALL K + VD + + LE A+ N + R + ++D S++ Sbjct: 52 FEIGCGTGVCTLALLAGRDDLKLIAVDSAARMLEQARENLAGYVAAGRVEFKEADALSAL 111 Query: 162 EGL----FDVIVSN 171 + L DV+ SN Sbjct: 112 QALPDASVDVVASN 125 >gi|306821075|ref|ZP_07454693.1| ribosomal protein L11 methyltransferase [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304550911|gb|EFM38884.1| ribosomal protein L11 methyltransferase [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 319 Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust. Identities = 33/135 (24%), Positives = 62/135 (45%), Gaps = 21/135 (15%) Query: 57 WRDFYNVR-------LTLSSDTFEPRPETELL-VDSALAFS----------LPRIEK--R 96 W+ ++NV+ + S + + P+ +++ +D +AF + IEK + Sbjct: 120 WKKYFNVQKVSNSIVIKPSWEEYTPKAGEKIIDIDPGMAFGTGTHETTRMCINAIEKYMK 179 Query: 97 DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 ++D+G G+G + +A K V VD+ A++++K N NG S D D Sbjct: 180 KGDSLIDIGCGSGILSIAAAHLGAQ-KVVAVDLDRLAVKVSKENVELNGFSNTIDVRYGD 238 Query: 157 WFSSVEGLFDVIVSN 171 ++ DVIV+N Sbjct: 239 LTDVIDEKADVIVAN 253 >gi|256394948|ref|YP_003116512.1| methyltransferase type 11 [Catenulispora acidiphila DSM 44928] gi|256361174|gb|ACU74671.1| Methyltransferase type 11 [Catenulispora acidiphila DSM 44928] Length = 258 Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust. Identities = 19/56 (33%), Positives = 32/56 (57%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 I+D+G GTG+ AL + + + +D S L+ +S A + GV+ R T+Q+D Sbjct: 34 IVDIGAGTGSGTFALARRFEAAEVIAIDQSPTMLDRLQSAAASRGVAGRLRTVQAD 89 >gi|227510237|ref|ZP_03940286.1| methyltransferase [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227189889|gb|EEI69956.1| methyltransferase [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 250 Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust. Identities = 32/117 (27%), Positives = 53/117 (45%), Gaps = 11/117 (9%) Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 NV + S+D F +D+ L ++ + V I+DL +G GAV L L E+ Sbjct: 18 NVSIIQSNDVFS------FSLDAVLLAEFAQVGSKRVKNIIDLCSGNGAVGLFLSSETS- 70 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPY 174 + V+I K ++A + N + + + D ++ + DVIV NPPY Sbjct: 71 AQITMVEIQEKLADMAARSIQLNHLENQVHVVNDDLKNTTHYISKDSVDVIVCNPPY 127 >gi|311745306|ref|ZP_07719091.1| putative methyltransferase YbiN [Algoriphagus sp. PR1] gi|126577839|gb|EAZ82059.1| putative methyltransferase YbiN [Algoriphagus sp. PR1] Length = 319 Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust. Identities = 30/97 (30%), Positives = 46/97 (47%), Gaps = 11/97 (11%) Query: 89 SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN---- 144 LP EK V +LDLGTG + L + VG +I KA+ A+ N +N Sbjct: 106 KLPEGEK---VNVLDLGTGANCIYPLLGTRIYNWNFVGSEIDPKAIHSAQQNLNSNPQIL 162 Query: 145 -GVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIES 177 V+ R + S + + +FD+++ NPP+ ES Sbjct: 163 KKVNLRLQENPKEILSGIIRSDDVFDLVLCNPPFHES 199 >gi|16329773|ref|NP_440501.1| hypothetical protein slr1039 [Synechocystis sp. PCC 6803] gi|1652258|dbj|BAA17181.1| slr1039 [Synechocystis sp. PCC 6803] Length = 233 Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust. Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 2/73 (2%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER--FDTLQSDWF 158 +LD GTGT + + L + P ++ +D + L IAK N + G + + + + Sbjct: 46 VLDAGTGTARIPILLAQLRPAWQITAIDFARSMLAIAKENVIAAGCETQICLEFVDAKQL 105 Query: 159 SSVEGLFDVIVSN 171 G FD +++N Sbjct: 106 PYANGSFDGVIAN 118 >gi|319407558|emb|CBI81208.1| 3-demethylubiquinone-9 3-methyltransferase [Bartonella sp. 1-1C] Length = 247 Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust. Identities = 23/81 (28%), Positives = 45/81 (55%), Gaps = 3/81 (3%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 ++ILD+G G G +C + + +G D + +E+AK +A+ +G+S + T ++ Sbjct: 66 LKILDIGCGGGLLCEPMARLGATV--IGADAAQTNIEVAKIHAIQSGLSINYRTTTAEAL 123 Query: 159 SSVEGLFDVIVSNPPYIESVI 179 ++ FDVI+ N +E V+ Sbjct: 124 ANEGEQFDVIL-NMEVVEHVV 143 >gi|300173616|ref|YP_003772782.1| methyltransferase [Leuconostoc gasicomitatum LMG 18811] gi|299887995|emb|CBL91963.1| Methyltransferase [Leuconostoc gasicomitatum LMG 18811] Length = 185 Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust. Identities = 28/115 (24%), Positives = 54/115 (46%), Gaps = 18/115 (15%) Query: 75 RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG----VDIS 130 RP T+ + ++ + +P ++ +V LDL GTG + + + +G+G VD Sbjct: 22 RPTTDKVKEAMFSMLMPYLDGEEV---LDLYAGTGGLGIEAVS-----RGMGHATLVDRQ 73 Query: 131 CKALEIAKSNAVTNGVSERFDTLQS------DWFSSVEGLFDVIVSNPPYIESVI 179 +A+++ ++N E F L+ FS + FD+I +PPY + + Sbjct: 74 VQAIQVIQNNIEKTHDKEAFTVLKMPSQQALQKFSEEKTQFDLIFLDPPYAKETL 128 >gi|261868733|ref|YP_003256655.1| ribosomal protein L11 methyltransferase [Aggregatibacter actinomycetemcomitans D11S-1] gi|261414065|gb|ACX83436.1| ribosomal protein L11 methyltransferase [Aggregatibacter actinomycetemcomitans D11S-1] Length = 294 Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust. Identities = 20/56 (35%), Positives = 33/56 (58%), Gaps = 1/56 (1%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 ++D G G+G + +A LK VG+DI +A+ +++NA NGV++R SD Sbjct: 162 VIDFGCGSGILAIAALKLGAK-SAVGIDIDPQAILASRNNAEQNGVADRLQLCLSD 216 >gi|156379240|ref|XP_001631366.1| predicted protein [Nematostella vectensis] gi|156218405|gb|EDO39303.1| predicted protein [Nematostella vectensis] Length = 213 Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust. Identities = 47/158 (29%), Positives = 73/158 (46%), Gaps = 22/158 (13%) Query: 105 GTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL 164 G G A+ A E + + +DI ++ A+ NA GV++R + + D+ V L Sbjct: 62 GVGGNAIQFAFTCE----RVIAIDIDPVKIDCARHNAEIYGVADRIEFVLGDFRQIVPQL 117 Query: 165 -FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT-------IADGVSRH 216 DVI +PP+ C +V D ISL DG Y T IA + R+ Sbjct: 118 KADVIFLSPPWGGPGYA-C--ADVFDIQTMISL----DGFELYETAKRVTPNIAYFMPRN 170 Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYG 254 +N + L S+ G KV++ + F ++KL V A+ YG Sbjct: 171 VNMEQLTSL-AGPAGKVEIEQNFVNKKLKTVTAY--YG 205 >gi|123441354|ref|YP_001005341.1| hypothetical protein YE1008 [Yersinia enterocolitica subsp. enterocolitica 8081] gi|262828849|sp|A1JKJ4|TRMN6_YERE8 RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName: Full=tRNA m6A37 methyltransferase gi|122088315|emb|CAL11106.1| conserved hypothetical protein [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 251 Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust. Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 4/85 (4%) Query: 100 RILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 ++LD+G G+G + L + + S P GV++ +A + A SNA + +ER Q D Sbjct: 53 KVLDIGCGSGLIALMIAQRSTPEVMIDGVELEPEAAQQASSNAAQSPWAERVHIYQQDVH 112 Query: 159 SSVEG---LFDVIVSNPPYIESVIV 180 E +D+IVSNPPY + Sbjct: 113 QFAENHLHQYDLIVSNPPYFAPAVA 137 >gi|51246119|ref|YP_066003.1| hypothetical protein DP2267 [Desulfotalea psychrophila LSv54] gi|50877156|emb|CAG36996.1| hypothetical protein DP2267 [Desulfotalea psychrophila LSv54] Length = 265 Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust. Identities = 29/103 (28%), Positives = 49/103 (47%), Gaps = 14/103 (13%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC-----KALEI 136 +D+ LA + R RI+DLG+G+G + L + ++ +GV I+ + + Sbjct: 40 LDAVLAAHF--LPPRKQARIIDLGSGSGIIALIMAYR---WRNLGVHITGFERQQSLISL 94 Query: 137 AKSNAVTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPYI 175 AK N NG E + D ++ L F+ +VSNPP+ Sbjct: 95 AKGNIELNGYDEICTIKEGDVRHILQHLPPESFEQLVSNPPFF 137 >gi|17231019|ref|NP_487567.1| hypothetical protein alr3527 [Nostoc sp. PCC 7120] gi|17132660|dbj|BAB75226.1| alr3527 [Nostoc sp. PCC 7120] Length = 299 Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust. Identities = 36/110 (32%), Positives = 52/110 (47%), Gaps = 5/110 (4%) Query: 35 RFFLTNAIVRSL-KHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRI 93 RF T+ I+ S ++ H I G + +T T P E LV AL + ++ Sbjct: 41 RFRRTDVIIPSYYTSQNFHGIEGGYLNSSAAVTYDPITEYVLPPNETLVRQALIDGV-KV 99 Query: 94 EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143 + R RILDLG GTG+ L L + P +G+D+S L A+ A T Sbjct: 100 QPR---RILDLGCGTGSTTLMLKQAFPQADVIGLDLSPYMLVRAEDKART 146 >gi|328354743|emb|CCA41140.1| ribosomal RNA large subunit methyltransferase F [Pichia pastoris CBS 7435] Length = 333 Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust. Identities = 31/121 (25%), Positives = 54/121 (44%), Gaps = 6/121 (4%) Query: 59 DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118 +++ +++ L PR L + + + + D ILD+GTG + L Sbjct: 50 EYFQLKVQLDKTRLCPRIPNRLKYLRLVGSLVEQFKLGDSPLILDIGTGHTCIYPLLGSR 109 Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ-----SDWFSSVEGLFDVIVSNPP 173 ++ +G DI ++LE AK N VS L+ D F +E DV+++NPP Sbjct: 110 LTSWRFIGTDIDERSLECAKKVLEENNVSSERIQLKLVRSGDDPFMDIENC-DVVMTNPP 168 Query: 174 Y 174 + Sbjct: 169 F 169 >gi|225868982|ref|YP_002744930.1| methylase [Streptococcus equi subsp. zooepidemicus] gi|225702258|emb|CAX00017.1| putative methylase [Streptococcus equi subsp. zooepidemicus] Length = 179 Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust. Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 4/84 (4%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+LDL G+G + + + + V V+ KA I ++N S++F L+ D Sbjct: 44 RVLDLFAGSGGLSIEAISRG-MSEAVLVERDRKAQAIIQANIEMTKASQQFTLLKMDAER 102 Query: 160 SVE---GLFDVIVSNPPYIESVIV 180 +++ G FDV+ +PPY + IV Sbjct: 103 ALDHLSGQFDVVFLDPPYAKETIV 126 >gi|138896092|ref|YP_001126545.1| hypothetical protein GTNG_2455 [Geobacillus thermodenitrificans NG80-2] gi|134267605|gb|ABO67800.1| Conserved hypothetical protein [Geobacillus thermodenitrificans NG80-2] Length = 247 Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust. Identities = 44/179 (24%), Positives = 71/179 (39%), Gaps = 39/179 (21%) Query: 89 SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148 + R +R +++D+G GTG + + L K ++ GVD+S L IA+ A G+ Sbjct: 29 AFDRYAQRPGRQVIDIGCGTGELAIRLAKAG--WQVSGVDVSEHMLVIAQEKAEAAGIHV 86 Query: 149 RF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSH 205 F + + D FS ++G F + D L + D + Sbjct: 87 PFFEQNMAELDGFSDLDGAF------------IFCDALNYLTDEDDVK------------ 122 Query: 206 YRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 RT + V R L DGL ++ K+DV LF F D+G + + C Sbjct: 123 -RTFS-AVYRALGADGLLLFDVHSVYKMDV--------LFRDAVFADHGEDISYIWICH 171 >gi|119775680|ref|YP_928420.1| rRNA (guanine-N(2)-)-methyltransferase [Shewanella amazonensis SB2B] gi|229470399|sp|A1S8P4|RLMG_SHEAM RecName: Full=Ribosomal RNA large subunit methyltransferase G; AltName: Full=23S rRNA m2G1835 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rlmG gi|119768180|gb|ABM00751.1| 16S rRNA m(2)G 1207 methyltransferase [Shewanella amazonensis SB2B] Length = 383 Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust. Identities = 29/104 (27%), Positives = 50/104 (48%), Gaps = 4/104 (3%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFS 159 ++DLG G G + L + P + VD S A+E A+ N N + E R + + D S Sbjct: 242 VIDLGCGNGVLALKAAQTYPDARLYLVDESAMAVESARQNWALNALDEGRAEFIWDDCLS 301 Query: 160 SV--EGLFDVIVSNPPYIES-VIVDCLGLEVRDFDPRISLDGGI 200 + E D+++ NPP+ + I D + ++ + R GG+ Sbjct: 302 HLPNEVQADLVLCNPPFHQGEAITDHIAWQMFNDAKRALKPGGL 345 >gi|332712019|ref|ZP_08431949.1| methylase involved in ubiquinone/menaquinone biosynthesis [Lyngbya majuscula 3L] gi|332349347|gb|EGJ28957.1| methylase involved in ubiquinone/menaquinone biosynthesis [Lyngbya majuscula 3L] Length = 440 Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust. Identities = 19/48 (39%), Positives = 28/48 (58%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148 ILD G GTG L L + +P K +G+DIS ++L++A+ G E Sbjct: 61 ILDAGCGTGYGSLTLAEANPGAKIIGIDISEQSLDLARKRLSHYGFDE 108 >gi|315500982|ref|YP_004079869.1| methyltransferase type 12 [Micromonospora sp. L5] gi|315407601|gb|ADU05718.1| Methyltransferase type 12 [Micromonospora sp. L5] Length = 496 Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust. Identities = 20/50 (40%), Positives = 31/50 (62%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 R+LDLG G GA+ AL+ + F + VGVD+S ++L +A + + ER Sbjct: 302 RVLDLGCGGGALLTALVADRRFTEVVGVDVSDRSLGLAARRLRLDRLPER 351 >gi|254820322|ref|ZP_05225323.1| putative methyltransferase [Mycobacterium intracellulare ATCC 13950] Length = 257 Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust. Identities = 18/57 (31%), Positives = 30/57 (52%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 R+LDLG G+G A+L+ P + VD++ L A++ G+ ER + + D Sbjct: 40 RLLDLGVGSGRALSAVLRRRPDVRATAVDLAPNMLSTARALFDAEGIGERVELRRED 96 >gi|166031898|ref|ZP_02234727.1| hypothetical protein DORFOR_01599 [Dorea formicigenerans ATCC 27755] gi|166028351|gb|EDR47108.1| hypothetical protein DORFOR_01599 [Dorea formicigenerans ATCC 27755] Length = 183 Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust. Identities = 32/117 (27%), Positives = 58/117 (49%), Gaps = 10/117 (8%) Query: 64 RLTLSS-DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 RL L + D + RP T+ + ++ F++ E D LDL +G+G + + L Sbjct: 10 RLQLKTLDGMDTRPTTDRIKETL--FNMISAELYDS-NFLDLFSGSGGIGIEALSRGAA- 65 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-----EGLFDVIVSNPPY 174 V V+ + KA++ + N + + +R T+Q D F+++ E F+ I +PPY Sbjct: 66 NAVFVEKNPKAMKCIQENLESTKLKDRAKTMQMDVFAALSRLNGEWKFEYIFMDPPY 122 >gi|220914767|ref|YP_002490075.1| methyltransferase small [Methylobacterium nodulans ORS 2060] gi|219952518|gb|ACL62908.1| methyltransferase small [Methylobacterium nodulans ORS 2060] Length = 299 Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust. Identities = 27/76 (35%), Positives = 38/76 (50%), Gaps = 3/76 (3%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+LDLGTG+G + L LL+ D+S A+ +A N N S R D F Sbjct: 81 RLLDLGTGSGILAL-LLRSLGAHDITASDVSTSAVGLALENESLNFRSSRIRFFSGDLFV 139 Query: 160 SV-EG-LFDVIVSNPP 173 + EG +D ++ NPP Sbjct: 140 GLPEGDRYDTVIFNPP 155 >gi|111025328|ref|YP_707748.1| methyltransferase [Rhodococcus jostii RHA1] gi|110824307|gb|ABG99590.1| methyltransferase [Rhodococcus jostii RHA1] Length = 260 Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust. Identities = 33/104 (31%), Positives = 49/104 (47%), Gaps = 9/104 (8%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+LDL GTG + + +K+ + VD+S +A NA + S R ++ D Sbjct: 77 RVLDLCAGTGVLSVCAVKQG-AGRVTAVDVSRRAFATTWINARLHRRSVRV--VRGDLTE 133 Query: 160 SVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202 V FD++VSNPPY+ + + GL S D G DG Sbjct: 134 PVRSERFDLVVSNPPYVPA---ETAGLPYSGVA--RSWDAGTDG 172 >gi|327479677|gb|AEA82987.1| ribosomal RNA small subunit methyltransferase C [Pseudomonas stutzeri DSM 4166] Length = 332 Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust. Identities = 21/79 (26%), Positives = 37/79 (46%), Gaps = 2/79 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+LD G G G + L + P + V +D+ A+E ++ NG+ + + D Sbjct: 194 RLLDFGCGAGILGATLKRRYPQSELVLLDVDAFAVESSRRTLAANGLEA--EVIAGDGID 251 Query: 160 SVEGLFDVIVSNPPYIESV 178 + I+SNPP+ + V Sbjct: 252 AAPRQLAAIISNPPFHQGV 270 >gi|229002424|ref|ZP_04160533.1| Methyltransferase type 11 [Bacillus mycoides Rock3-17] gi|228758619|gb|EEM07751.1| Methyltransferase type 11 [Bacillus mycoides Rock3-17] Length = 207 Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust. Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 10/79 (12%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKS----NAVTNGVSERFDTLQS 155 +ILD+GTG+G++ + L K P G+D E +K+ NA GVS+R D L++ Sbjct: 40 KILDIGTGSGSLIIKLAKTFPKPFLTGIDYWGGNWEYSKAQCQQNAEIEGVSDRVDFLKA 99 Query: 156 DW----FSSVEGLFDVIVS 170 F+ E FD+IVS Sbjct: 100 SAAELPFNDDE--FDIIVS 116 >gi|118469810|ref|YP_886143.1| methylase [Mycobacterium smegmatis str. MC2 155] gi|118171097|gb|ABK71993.1| methylase, putative [Mycobacterium smegmatis str. MC2 155] Length = 222 Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust. Identities = 38/132 (28%), Positives = 62/132 (46%), Gaps = 9/132 (6%) Query: 72 FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131 + P+ +++LL+D+ L R + R+LDL TG+G V +A +DI Sbjct: 10 YRPQEDSQLLIDA-----LERSGEVPGRRVLDLCTGSGVVAIAAAHLGAEHV-TALDICP 63 Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDF 190 +A+E A +NA + + D W ++ FD++V NPPY+ + G Sbjct: 64 RAVEYATANAASA--AADVDVRLGTWNEALNWEPFDLVVCNPPYVPTSPAVDPGSVAPWA 121 Query: 191 DPRISLDGGIDG 202 P + DGG DG Sbjct: 122 GPATAWDGGADG 133 >gi|134300333|ref|YP_001113829.1| 50S ribosomal protein L11 methyltransferase [Desulfotomaculum reducens MI-1] gi|172044330|sp|A4J7F1|PRMA_DESRM RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11 Mtase gi|134053033|gb|ABO51004.1| [LSU ribosomal protein L11P]-lysine N-methyltransferase [Desulfotomaculum reducens MI-1] Length = 308 Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust. Identities = 33/125 (26%), Positives = 60/125 (48%), Gaps = 13/125 (10%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 + D+GTGTG + + K + + VD+ A+++++ N NGV + + + Sbjct: 174 VADVGTGTGILAITSAKLGAA-RVLAVDLDEVAVKVSQENVERNGVQDIVEVFHGNLLDK 232 Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG---IDGLSHYRTIADGVSRHL 217 VE DV+++N I + ++ L +V PRI GG G+ +R A+ V + L Sbjct: 233 VESKVDVVIAN---IVANVIMILAPDV----PRILKHGGYFITSGIIQFR--AEEVRQKL 283 Query: 218 NKDGL 222 + G Sbjct: 284 EQTGF 288 >gi|57641208|ref|YP_183686.1| SAM-dependent methyltransferase [Thermococcus kodakarensis KOD1] gi|57159532|dbj|BAD85462.1| SAM-dependent methyltransferase, UbiE/COQ5 family [Thermococcus kodakarensis KOD1] Length = 249 Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust. Identities = 19/56 (33%), Positives = 33/56 (58%), Gaps = 2/56 (3%) Query: 95 KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150 KR+V R+LDL GTG L L + ++ +G+D+ + L +A+ A G++ +F Sbjct: 39 KREVKRVLDLACGTGIPTLELAERG--YEVLGLDLHEEMLRVARRKAEARGLNVKF 92 >gi|186680772|ref|YP_001863968.1| methyltransferase type 12 [Nostoc punctiforme PCC 73102] gi|186463224|gb|ACC79025.1| Methyltransferase type 12 [Nostoc punctiforme PCC 73102] Length = 334 Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust. Identities = 20/64 (31%), Positives = 35/64 (54%), Gaps = 1/64 (1%) Query: 95 KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154 K + +++LD+ G +A+ + +P + GVD + LE+AK NA GV+ R+ T+ Sbjct: 162 KIEPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWAS-VLEVAKENARIQGVASRYHTIA 220 Query: 155 SDWF 158 F Sbjct: 221 GSAF 224 >gi|292489659|ref|YP_003532549.1| multifunctional cyclase-dehydratase-3-O-methyl transferase tcmN [Erwinia amylovora CFBP1430] gi|292898127|ref|YP_003537496.1| methyltransferase [Erwinia amylovora ATCC 49946] gi|291197975|emb|CBJ45077.1| putative methyltransferase [Erwinia amylovora ATCC 49946] gi|291555096|emb|CBA23219.1| Multifunctional cyclase-dehydratase-3-O-methyl transferase tcmN [Erwinia amylovora CFBP1430] gi|312173834|emb|CBX82088.1| Multifunctional cyclase-dehydratase-3-O-methyl transferase tcmN [Erwinia amylovora ATCC BAA-2158] Length = 351 Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust. Identities = 26/86 (30%), Positives = 36/86 (41%), Gaps = 5/86 (5%) Query: 90 LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 L + + ILDLG G G + P GVG+DIS A+E A + ++ R Sbjct: 163 LQALSDKSSSHILDLGCGAGQFLIDACLRDPSLTGVGLDISAPAIEEANELCIKYNLTNR 222 Query: 150 F-----DTLQSDWFSSVEGLFDVIVS 170 D Q D +S DVI + Sbjct: 223 LTFVVGDAFQPDSWSEECRKADVICA 248 >gi|302560459|ref|ZP_07312801.1| UbiE/COQ5 family methyltransferase [Streptomyces griseoflavus Tu4000] gi|302478077|gb|EFL41170.1| UbiE/COQ5 family methyltransferase [Streptomyces griseoflavus Tu4000] Length = 284 Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust. Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 10/91 (10%) Query: 87 AFSLPRIEKRDVV---RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143 AF+ P + + R+LD+G GTG L + + +GVD+S LE A+ +AV Sbjct: 34 AFNAPLFDAAGIAAGDRVLDVGCGTGQTTLIAARRAYDGSVLGVDLSAPMLERARRDAVA 93 Query: 144 NGVS----ERFDTLQSDWFSSVEGLFDVIVS 170 GV E+ D Q F E FDV++S Sbjct: 94 EGVGNVGFEQGDA-QVHPFPGQE--FDVVLS 121 >gi|253577952|ref|ZP_04855224.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA] gi|251850270|gb|EES78228.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA] Length = 837 Score = 36.6 bits (83), Expect = 3.4, Method: Composition-based stats. Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 6/79 (7%) Query: 94 EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER--FD 151 + +D ++ILD+GTG G + L + +K VD + + L+ AK NA + ER F Sbjct: 46 KAKDEIKILDIGTGPGFFPVILAEAG--YKVTAVDYTQEMLDTAKRNA--GNLCERISFY 101 Query: 152 TLQSDWFSSVEGLFDVIVS 170 + + +G+FDV++S Sbjct: 102 KMDAQNLEFEDGVFDVVIS 120 >gi|218290104|ref|ZP_03494266.1| methyltransferase small [Alicyclobacillus acidocaldarius LAA1] gi|218239813|gb|EED07002.1| methyltransferase small [Alicyclobacillus acidocaldarius LAA1] Length = 413 Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust. Identities = 26/83 (31%), Positives = 39/83 (46%), Gaps = 7/83 (8%) Query: 97 DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 D +LD TGA + L VDIS A+E+A+ NA NGV +R D ++ Sbjct: 235 DGAHVLDCFCHTGAFAVHALHYGAAHV-TAVDISADAVELARQNARRNGVLDRADFAVAN 293 Query: 157 WFSSVE------GLFDVIVSNPP 173 F + +DV++ +PP Sbjct: 294 AFDYLREQDARGARYDVVILDPP 316 >gi|115374327|ref|ZP_01461611.1| ribosomal protein L11 methyltransferase [Stigmatella aurantiaca DW4/3-1] gi|115368637|gb|EAU67588.1| ribosomal protein L11 methyltransferase [Stigmatella aurantiaca DW4/3-1] Length = 247 Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust. Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 3/71 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LD+GTGTG + +A K + VG D ++E+A NA N + L Sbjct: 119 VLDVGTGTGVLAIAAKKLG-AGRVVGTDNDPTSVELAHENAAVNDTPDV--ELSGKGLEQ 175 Query: 161 VEGLFDVIVSN 171 V G FD++V+N Sbjct: 176 VPGTFDLVVAN 186 >gi|28378753|ref|NP_785645.1| N6-adenine-specific methylase (putative) [Lactobacillus plantarum WCFS1] gi|28271590|emb|CAD64495.1| N6-adenine-specific methylase (putative) [Lactobacillus plantarum WCFS1] Length = 187 Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust. Identities = 36/139 (25%), Positives = 60/139 (43%), Gaps = 17/139 (12%) Query: 59 DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118 DF RL + + RP T+ + ++ P D + LDL G+G + + + Sbjct: 7 DFGGRRLK-AVPGMQTRPTTDKVKEAVFNIIGPYF---DGGQSLDLFAGSGGLSIEAVSR 62 Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW------FSSVEGLFDVIVSNP 172 + V +D +A++ K N V ERF+ ++ D +S + FD + +P Sbjct: 63 G-VARAVLIDRQYQAIKTIKDNIAVTKVPERFEVIKGDAERILDRLASQDEHFDWVFLDP 121 Query: 173 PYIESVIV------DCLGL 185 PY + IV D LGL Sbjct: 122 PYAKQQIVKDIQHCDALGL 140 >gi|87307314|ref|ZP_01089459.1| hypothetical protein DSM3645_17365 [Blastopirellula marina DSM 3645] gi|87290054|gb|EAQ81943.1| hypothetical protein DSM3645_17365 [Blastopirellula marina DSM 3645] Length = 389 Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust. Identities = 28/81 (34%), Positives = 46/81 (56%), Gaps = 9/81 (11%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWF 158 R+LD+ TG LA K + +G+D S KA+++A+ NA NG+S RF+++ D F Sbjct: 217 RVLDMFCYTGGFALAAAKLGGASEVIGIDGSDKAIDLARRNAERNGLSNVRFESV--DAF 274 Query: 159 SSVEGL------FDVIVSNPP 173 ++ L FD ++ +PP Sbjct: 275 DHLKALVDAGEKFDAVILDPP 295 >gi|329117152|ref|ZP_08245869.1| hypothetical protein SPB_1152 [Streptococcus parauberis NCFD 2020] gi|326907557|gb|EGE54471.1| hypothetical protein SPB_1152 [Streptococcus parauberis NCFD 2020] Length = 386 Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust. Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 13/63 (20%) Query: 126 GVDISCKALEIAKSNAVTNGVSE-------RFDTLQSDWFSSVEGLFDVIVSNPPYIESV 178 G DI + +EIAK NAV G+++ R L++D V G V++SNPPY E + Sbjct: 261 GFDIDARLIEIAKENAVEAGLADVITFKQMRLQDLKTD---KVNG---VLISNPPYGERL 314 Query: 179 IVD 181 + D Sbjct: 315 LDD 317 >gi|325913301|ref|ZP_08175669.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Lactobacillus iners UPII 60-B] gi|325477404|gb|EGC80548.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Lactobacillus iners UPII 60-B] Length = 448 Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust. Identities = 31/95 (32%), Positives = 49/95 (51%), Gaps = 13/95 (13%) Query: 86 LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145 LA ++ DVV +D +G G + L++ K K +GV+I A++ AK NA+ NG Sbjct: 291 LAIQKAQLTANDVV--IDAYSGIGTIGLSVAKHVK--KVLGVEIVRDAVKDAKKNAILNG 346 Query: 146 VSE------RFDTLQSDWFSSVEGL-FDVIVSNPP 173 ++ + + L W + EGL DVI +PP Sbjct: 347 INNAEYFEGKAEELMPQWAN--EGLKTDVIFVDPP 379 >gi|288930472|ref|YP_003434532.1| hypothetical protein Ferp_0067 [Ferroglobus placidus DSM 10642] gi|288892720|gb|ADC64257.1| protein of unknown function Met10 [Ferroglobus placidus DSM 10642] Length = 277 Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust. Identities = 44/172 (25%), Positives = 73/172 (42%), Gaps = 21/172 (12%) Query: 22 VIVDPDSVLDDRQRFFLTNAIVRSLKH-ESIHRILGW--RDF----YNVRLTLSSDTFEP 74 +I PD +L + + AI+ KH ++I R +G DF Y V ++T Sbjct: 31 IIEIPDEILHLKDE--IAKAILAKHKHVKTILRKVGEVEGDFRIAKYEVIYGGETETIAK 88 Query: 75 RPETELLVDSALAF-------SLPRIEK--RDVVRILDLGTGTGAVCLALLKESPFFKGV 125 LVD A+ RI K R+ R+L + G G + + + S + + Sbjct: 89 EHSCRFLVDPTKAYYTVKLSGERERIAKLVREGERVLVMYAGVGPYAIVIARLSKPREVI 148 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQS---DWFSSVEGLFDVIVSNPPY 174 G++++ A+E K N N V ++ D +EG+FD +V PY Sbjct: 149 GIELNPVAVEYFKKNVKLNKVEGIVKVIEGDVRDVVPKLEGVFDRVVMPAPY 200 >gi|239994805|ref|ZP_04715329.1| type I site-specific deoxyribonuclease [Alteromonas macleodii ATCC 27126] Length = 530 Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust. Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 5/96 (5%) Query: 84 SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE-SPFFKGVGVDISCKALEIAKSNAV 142 S L L + K + + D G+G++ L + KE K G + + +A+ N + Sbjct: 209 SKLLAKLVTMGKTKLKSVYDPTCGSGSLLLRVAKEVKEVGKYCGQESNPSTYNLARMNMI 268 Query: 143 TNGVSER-FDTLQSDWFSS---VEGLFDVIVSNPPY 174 +GV R FD Q D + +E F+ +V+NPP+ Sbjct: 269 LHGVHYRQFDIQQDDTLETPHHIEERFEAVVANPPF 304 >gi|21328671|gb|AAM48677.1| magnesium-protoporphyrin O-methyltransferase [uncultured marine proteobacterium] Length = 221 Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust. Identities = 27/72 (37%), Positives = 34/72 (47%), Gaps = 3/72 (4%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 R+LD G GTGA+ L + V VDIS K + IAK + VS + D F Sbjct: 60 ARVLDAGCGTGALAFQLAQAGADV--VAVDISPKLITIAKQRQPAH-VSGTLKLMAGDMF 116 Query: 159 SSVEGLFDVIVS 170 G FD IV+ Sbjct: 117 DPGLGHFDHIVA 128 >gi|332193981|gb|AEE32102.1| S-adenosylmethionine-dependent methyltransferase domain-containing protein [Arabidopsis thaliana] Length = 538 Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust. Identities = 20/75 (26%), Positives = 38/75 (50%), Gaps = 3/75 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 ++D TG G + S + + +D+ K L++AK NA GV+++ D ++ D+F Sbjct: 372 VIDCFTGVGGNAIQFASRSHYV--IAIDLDPKKLDLAKHNAAIYGVADKIDFVKGDFFDL 429 Query: 161 VEGL-FDVIVSNPPY 174 L + +PP+ Sbjct: 430 AHNLKAGTVFLSPPW 444 >gi|328886401|emb|CCA59640.1| hypothetical protein SVEN_6354 [Streptomyces venezuelae ATCC 10712] Length = 357 Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust. Identities = 21/59 (35%), Positives = 31/59 (52%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 V RILD+G+G G V L + P + V VD + + L A+ A G+ R TL ++ Sbjct: 116 VRRILDVGSGPGVVTSVLARAFPEAEAVAVDGTPELLTRAREYAEARGLGGRVSTLHAE 174 >gi|315652701|ref|ZP_07905675.1| O-methyltransferase [Eubacterium saburreum DSM 3986] gi|315484903|gb|EFU75311.1| O-methyltransferase [Eubacterium saburreum DSM 3986] Length = 249 Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust. Identities = 20/81 (24%), Positives = 42/81 (51%), Gaps = 4/81 (4%) Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 +DL TG+G V + L ++ K G++I ++A + N + E+ D + D +++ Sbjct: 54 VDLCTGSGIVPILLSTKTKAKKITGIEIQSDIADMASRSVSYNKLDEKIDIINDDISNAL 113 Query: 162 EGL----FDVIVSNPPYIESV 178 + + D + NPPY++ + Sbjct: 114 KYIKHSCVDTVCVNPPYMKDM 134 >gi|261749587|ref|YP_003257273.1| ubiquinone/menaquinone biosynthesis methyltransferase [Blattabacterium sp. (Periplaneta americana) str. BPLAN] gi|261497680|gb|ACX84130.1| ubiquinone/menaquinone biosynthesis methyltransferase [Blattabacterium sp. (Periplaneta americana) str. BPLAN] Length = 243 Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust. Identities = 18/65 (27%), Positives = 37/65 (56%) Query: 90 LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 L + +++ ++LD+ TGTG + L + K+ +G+D S + L+IA++ N + +R Sbjct: 47 LTKFSTKNIQKVLDIATGTGDLALLIAKKFHKTSVIGLDPSKEMLKIARNKIKDNFLKKR 106 Query: 150 FDTLQ 154 +Q Sbjct: 107 IQFVQ 111 >gi|237799768|ref|ZP_04588229.1| ribosomal RNA small subunit methyltransferase C [Pseudomonas syringae pv. oryzae str. 1_6] gi|331022623|gb|EGI02680.1| ribosomal RNA small subunit methyltransferase C [Pseudomonas syringae pv. oryzae str. 1_6] Length = 332 Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust. Identities = 26/105 (24%), Positives = 44/105 (41%), Gaps = 2/105 (1%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 +D A L I+K +LD G G G + A+ + P + + +D+ A + Sbjct: 176 LDRGSALLLENIDKLPSGNLLDFGCGAGVLGAAVKRRYPHNEVIMLDVDAFATASVRLTL 235 Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLE 186 NG+ + L D + + I+SNPP+ V D + E Sbjct: 236 AANGLEAQ--VLTGDGIDAAPMDLNTILSNPPFHVGVHTDYMATE 278 >gi|237730016|ref|ZP_04560497.1| conserved hypothetical protein [Citrobacter sp. 30_2] gi|226908622|gb|EEH94540.1| conserved hypothetical protein [Citrobacter sp. 30_2] Length = 378 Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust. Identities = 26/92 (28%), Positives = 48/92 (52%), Gaps = 4/92 (4%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS--ERFDTLQSDW 157 I+DLG G G + + LL ++P V VD S A+ ++ N +N +R + + ++ Sbjct: 231 EIVDLGCGNGVIGMTLLAKNPEASVVFVDESPMAVASSRLNVESNMPEALDRCEFMINNA 290 Query: 158 FSSVEGL-FDVIVSNPPYIES-VIVDCLGLEV 187 S VE F+ ++ NPP+ + + D + E+ Sbjct: 291 LSGVEPFRFNAVLCNPPFHQKHALTDNIAWEM 322 >gi|172037437|ref|YP_001803938.1| hypothetical protein cce_2524 [Cyanothece sp. ATCC 51142] gi|171698891|gb|ACB51872.1| unknown [Cyanothece sp. ATCC 51142] Length = 204 Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust. Identities = 17/40 (42%), Positives = 26/40 (65%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140 +LDLG GTG + L + P +G+GVD+S + L+ A+ N Sbjct: 48 VLDLGCGTGRLLNRLARTFPDLQGIGVDLSPQMLKQAREN 87 >gi|104774034|ref|YP_619014.1| Type I restriction-modification system, modification subunit [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|103423115|emb|CAI97854.1| Type I restriction-modification system, modification subunit [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] Length = 532 Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust. Identities = 30/109 (27%), Positives = 45/109 (41%), Gaps = 13/109 (11%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGV---GVDISCKALEIAKSNAV------TNGVSER 149 + + D G+G++ L K P + G +I+ +A+ N + N Sbjct: 218 MTVYDPAMGSGSLLLNFKKYVPNSSRITYYGQEINTSTFNLARMNMILHRVDLANQKLRN 277 Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG 198 DTL DW + FD +V NPPY + D L+ DPR S G Sbjct: 278 GDTLDEDWPAEEITNFDSVVMNPPYSQKWKADKGFLD----DPRFSKYG 322 >gi|328881226|emb|CCA54465.1| Ribosomal RNA small subunit methyltransferase C [Streptomyces venezuelae ATCC 10712] Length = 387 Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust. Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 2/78 (2%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN-GVSERFDTLQSDW 157 R+ DLG G G V LA+ P + V D S +A+ A+ N T+ G + + L D Sbjct: 243 ARVADLGCGNGVVGLAIALHEPDAELVFTDESYQAVASAEENFRTHVGDGRKAEFLVGDG 302 Query: 158 FSSV-EGLFDVIVSNPPY 174 + + +G D++++NPP+ Sbjct: 303 LADLPDGSVDLVLNNPPF 320 >gi|323140978|ref|ZP_08075888.1| putative 23S rRNA m5C1962 methyltransferase [Phascolarctobacterium sp. YIT 12067] gi|322414515|gb|EFY05324.1| putative 23S rRNA m5C1962 methyltransferase [Phascolarctobacterium sp. YIT 12067] Length = 407 Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust. Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 8/80 (10%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LD T TG+ L K VDIS +A+++A+ NA N S+ LQ++ F Sbjct: 235 VLDCFTHTGSFALNAAKGGAA-SVTAVDISAEAVQMAEHNAAINNCSDVMHGLQANVFDL 293 Query: 161 VEGLF-------DVIVSNPP 173 + LF D I+ +PP Sbjct: 294 LSDLFNKHSREYDFIILDPP 313 >gi|257465361|ref|ZP_05629732.1| ribosomal protein L11 methyltransferase [Actinobacillus minor 202] gi|257451021|gb|EEV25064.1| ribosomal protein L11 methyltransferase [Actinobacillus minor 202] Length = 294 Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust. Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 4/72 (5%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159 ++D G G+G + +A LK + +G+DI +A+ + +NA NGV++R + L D Sbjct: 162 VIDFGCGSGILAIAALKLGAK-RAIGIDIDPQAILASTNNAEANGVADRLELFLAKD--Q 218 Query: 160 SVEGLFDVIVSN 171 + L DV+V+N Sbjct: 219 PKDLLADVVVAN 230 >gi|240949870|ref|ZP_04754195.1| ribosomal protein L11 methyltransferase [Actinobacillus minor NM305] gi|240295687|gb|EER46392.1| ribosomal protein L11 methyltransferase [Actinobacillus minor NM305] Length = 294 Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust. Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 4/72 (5%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159 ++D G G+G + +A LK + +G+DI +A+ + +NA NGV++R + L D Sbjct: 162 VIDFGCGSGILAIAALKLGAK-RAIGIDIDPQAILASTNNAEANGVADRLELFLAKD--Q 218 Query: 160 SVEGLFDVIVSN 171 + L DV+V+N Sbjct: 219 PKDLLADVVVAN 230 >gi|189459439|ref|ZP_03008224.1| hypothetical protein BACCOP_00062 [Bacteroides coprocola DSM 17136] gi|189433896|gb|EDV02881.1| hypothetical protein BACCOP_00062 [Bacteroides coprocola DSM 17136] Length = 1002 Score = 36.6 bits (83), Expect = 3.6, Method: Composition-based stats. Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 10/68 (14%) Query: 119 SPFFKGVGVDISCKALEIAKS-----NAVTNGVSERFDTLQSDWFSSV-----EGLFDVI 168 S KG+G +I C + A+ + + E +T DW SS G FD + Sbjct: 478 SQILKGIGANIRCGNTLVGTDIEQHFPAIADNMRELQETNAFDWESSFPTVFENGGFDFV 537 Query: 169 VSNPPYIE 176 V NPPY+E Sbjct: 538 VGNPPYVE 545 >gi|225011632|ref|ZP_03702070.1| ubiquinone/menaquinone biosynthesis methyltransferase [Flavobacteria bacterium MS024-2A] gi|225004135|gb|EEG42107.1| ubiquinone/menaquinone biosynthesis methyltransferase [Flavobacteria bacterium MS024-2A] Length = 243 Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust. Identities = 21/49 (42%), Positives = 30/49 (61%), Gaps = 1/49 (2%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 ILD+ TGTG + LAL K + K +G+DIS LEI K + +++R Sbjct: 61 ILDIATGTGDLVLALAKLNA-KKIIGLDISPGMLEIGKKKVLAQNLTDR 108 >gi|86356538|ref|YP_468430.1| cyclopropane-fatty-acyl-phospholipid synthase protein [Rhizobium etli CFN 42] gi|86280640|gb|ABC89703.1| cyclopropane-fatty-acyl-phospholipid synthase protein [Rhizobium etli CFN 42] Length = 419 Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust. Identities = 22/71 (30%), Positives = 39/71 (54%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 RIL++G+G G + + L + + G+ +S + L++++S A G+SER D+ + Sbjct: 176 RILEIGSGWGGMGMYLAEATEGADFTGITLSEEQLKVSRSRAEKRGLSERVRFELQDYRT 235 Query: 160 SVEGLFDVIVS 170 FD IVS Sbjct: 236 MNGRKFDRIVS 246 >gi|327330728|gb|EGE72474.1| type I restriction-modification system, M subunit [Propionibacterium acnes HL097PA1] Length = 522 Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust. Identities = 30/111 (27%), Positives = 55/111 (49%), Gaps = 14/111 (12%) Query: 72 FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK--ESPFFKG-VGVD 128 F P+ +E+L A+ +K+ + ++ D G+G++ L K KG G + Sbjct: 205 FTPQEVSEVLARIAVG------DKKRIGKVYDPAVGSGSLLLKFAKLLGPENVKGFYGQE 258 Query: 129 ISCKALEIAKSNAVTNGVS-ERFDTLQSDWFSSV----EGLFDVIVSNPPY 174 I+ +A+ N +G++ E+FD + D ++ + F+ IVSNPPY Sbjct: 259 INLTTYNLARINMFLHGINYEQFDIVLGDTLTNPMHRDKEPFEAIVSNPPY 309 >gi|227508000|ref|ZP_03938049.1| methyltransferase family protein [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227192544|gb|EEI72611.1| methyltransferase family protein [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 241 Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust. Identities = 27/74 (36%), Positives = 38/74 (51%), Gaps = 7/74 (9%) Query: 90 LPRIEKRDVVRILDLGTGTGAVCLALLK-ESPFFKGVGVDI------SCKALEIAKSNAV 142 L + + D +LDLG G GAV +AL K PF K VGVD+ S +LE K N Sbjct: 71 LAKTDISDDATVLDLGCGHGAVLIALSKLLGPFGKAVGVDLWKNADQSHNSLEETKRNLE 130 Query: 143 TNGVSERFDTLQSD 156 V++ + + +D Sbjct: 131 IAKVADHTELVTAD 144 >gi|148979052|ref|ZP_01815297.1| 16S RNA G1207 methylase RsmC [Vibrionales bacterium SWAT-3] gi|145962025|gb|EDK27313.1| 16S RNA G1207 methylase RsmC [Vibrionales bacterium SWAT-3] Length = 340 Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust. Identities = 32/123 (26%), Positives = 54/123 (43%), Gaps = 11/123 (8%) Query: 57 WRDFYNVRLTLSSDTFEPRP----ETELLVDSALAF-SLPRIEKRDVVRILDLGTGTGAV 111 W Y V + S T + P E V S L +LP ++ + +LD G G G + Sbjct: 159 WFKTYTVNIGEQSLTVKSLPGVFSHGEFDVGSQLLLDTLPTLKGK----VLDFGCGAGVL 214 Query: 112 CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSN 171 + +P + DIS A+ +++ NG++ + SD +S + I+SN Sbjct: 215 GAVMASRNPDIELEMCDISAFAVASSQATLEANGLTGK--VFASDVYSDTAQDYQFIISN 272 Query: 172 PPY 174 PP+ Sbjct: 273 PPF 275 >gi|169344572|ref|ZP_02865538.1| modification methylase BsuBI [Clostridium perfringens C str. JGS1495] gi|169297182|gb|EDS79294.1| modification methylase BsuBI [Clostridium perfringens C str. JGS1495] Length = 493 Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust. Identities = 27/101 (26%), Positives = 46/101 (45%), Gaps = 26/101 (25%) Query: 96 RDVVRILDLGTGTGAVCLALLKE--SPFFKG-----------VGVDISCKALEIAKSNAV 142 +D + ILD G GTG + +L+ + FKG V +D+ K ++I K+ Sbjct: 47 KDNLNILDCGAGTGILAFSLVDKLIEEGFKGTLNIDLYENDEVVIDVLLKNIDIYKAKYK 106 Query: 143 TNGVSERFDTLQSDWF---------SSVEGLFDVIVSNPPY 174 + QS++ S +G +D+++SNPPY Sbjct: 107 NLNIK----VFQSNFILENMKLWEDKSFKGKYDIVISNPPY 143 >gi|189424156|ref|YP_001951333.1| hypothetical protein Glov_1090 [Geobacter lovleyi SZ] gi|189420415|gb|ACD94813.1| protein of unknown function Met10 [Geobacter lovleyi SZ] Length = 391 Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust. Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 6/55 (10%) Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPP 173 +G+DIS +A+ +A NA NG+S+R + D F + L F V+V +PP Sbjct: 243 LGLDISERAVALAGRNAALNGLSDRVSFEECDAFDRLRSLKLEGRSFGVVVMDPP 297 >gi|147920880|ref|YP_684471.1| methyltransferase [uncultured methanogenic archaeon RC-I] gi|116077947|emb|CAJ35145.2| putative methyltransferase (UbiE/COQ5 family) [uncultured methanogenic archaeon RC-I] Length = 220 Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust. Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 1/73 (1%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWF 158 R+LD+G+G G + + L +P VG+D+S ++IA + A G+ F +D Sbjct: 51 RVLDVGSGPGRLPIMLAARNPRLYVVGLDLSGDMVKIASATAAKKGLHNVEFRQGSADTL 110 Query: 159 SSVEGLFDVIVSN 171 + FD+++S Sbjct: 111 PFGDREFDLVIST 123 >gi|90407656|ref|ZP_01215836.1| 16S RNA G1207 methylase RsmC [Psychromonas sp. CNPT3] gi|90311247|gb|EAS39352.1| 16S RNA G1207 methylase RsmC [Psychromonas sp. CNPT3] Length = 384 Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust. Identities = 28/91 (30%), Positives = 43/91 (47%), Gaps = 10/91 (10%) Query: 97 DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 D I+DLG G G V +A L+ K +D S A++ A+ N + N ER D + Sbjct: 237 DFSNIVDLGCGNGIVGMAALEYYADSKVTFIDESYMAVDSARINTLKNFEEERSDNAR-- 294 Query: 157 WFSSVEGL-------FDVIVSNPPYIESVIV 180 F GL D+I+ NPP+ + ++ Sbjct: 295 -FVVNNGLVGFKAASHDLILCNPPFHQQQVI 324 >gi|87307648|ref|ZP_01089792.1| putative methyltransferase [Blastopirellula marina DSM 3645] gi|87289818|gb|EAQ81708.1| putative methyltransferase [Blastopirellula marina DSM 3645] Length = 354 Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust. Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 3/77 (3%) Query: 97 DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 D +LD+G GTG ALL+++P + + D + L+IA GV++R + + D Sbjct: 186 DAKLLLDVGGGTGIYSHALLQKNPHLRAIVFD-RPQVLKIAAQMGEAYGVNDRCEFVSGD 244 Query: 157 WFSS--VEGLFDVIVSN 171 F+ EG +++SN Sbjct: 245 MFADPLPEGADTILLSN 261 >gi|313682871|ref|YP_004060609.1| methyltransferase small [Sulfuricurvum kujiense DSM 16994] gi|313155731|gb|ADR34409.1| methyltransferase small [Sulfuricurvum kujiense DSM 16994] Length = 233 Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust. Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 9/79 (11%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKA---LEIAKSNAVTNGVSERFDTLQSD 156 ++LD+G G+G V L + ++ FK V ++ S K E A+ NA NG+ + + D Sbjct: 31 KMLDVGAGSGIVGLLVARD---FKEVVLEGSEKQSLYAEFARRNAQINGIG--YTLHEGD 85 Query: 157 WFS-SVEGLFDVIVSNPPY 174 + G +D IVSNPP+ Sbjct: 86 FLELGGHGSYDWIVSNPPF 104 >gi|42571775|ref|NP_973978.1| WW domain-containing protein [Arabidopsis thaliana] Length = 538 Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust. Identities = 20/75 (26%), Positives = 38/75 (50%), Gaps = 3/75 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 ++D TG G + S + + +D+ K L++AK NA GV+++ D ++ D+F Sbjct: 370 VIDCFTGVGGNAIQFASRSHYV--IAIDLDPKKLDLAKHNAAIYGVADKIDFVKGDFFDL 427 Query: 161 VEGL-FDVIVSNPPY 174 L + +PP+ Sbjct: 428 AHNLKAGTVFLSPPW 442 >gi|15603175|ref|NP_246248.1| hypothetical protein PM1310 [Pasteurella multocida subsp. multocida str. Pm70] gi|12721672|gb|AAK03394.1| unknown [Pasteurella multocida subsp. multocida str. Pm70] Length = 270 Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust. Identities = 25/74 (33%), Positives = 38/74 (51%), Gaps = 5/74 (6%) Query: 90 LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSE 148 + R++ +V +LD+G G GA+CLA+ +P K V G+D S L + + A G E Sbjct: 56 VSRMDLNNVESLLDVGCGGGAICLAI---APQVKQVYGLDYSEGMLSVLQQRATKLGF-E 111 Query: 149 RFDTLQSDWFSSVE 162 +Q W S E Sbjct: 112 HVQAIQKSWDDSWE 125 >gi|95929550|ref|ZP_01312292.1| conserved hypothetical protein 95 [Desulfuromonas acetoxidans DSM 684] gi|95134247|gb|EAT15904.1| conserved hypothetical protein 95 [Desulfuromonas acetoxidans DSM 684] Length = 189 Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust. Identities = 28/115 (24%), Positives = 53/115 (46%), Gaps = 4/115 (3%) Query: 68 SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 S E RP ++ + ++ + R+ D + +LDL GTGA+ L L G V Sbjct: 15 SVQGIEIRPTSDRVREALFSSLTSRLGSFDGMEVLDLFAGTGALGLEALSRGAAH-GCFV 73 Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQ---SDWFSSVEGLFDVIVSNPPYIESVI 179 D +A ++ +N+ +++R + + G FD+I +PPY + ++ Sbjct: 74 DSGRQAQKLIHTNSAHCAMAQRCQLIALPVERALDKLRGKFDLIFLDPPYRKGLV 128 >gi|331696796|ref|YP_004333035.1| methyltransferase small [Pseudonocardia dioxanivorans CB1190] gi|326951485|gb|AEA25182.1| methyltransferase small [Pseudonocardia dioxanivorans CB1190] Length = 497 Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust. Identities = 29/84 (34%), Positives = 42/84 (50%), Gaps = 5/84 (5%) Query: 95 KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154 +R V LDLGTG G L + S VG D++ +AL +A + +GV R + + Sbjct: 153 RRPVDATLDLGTGCGVQALHASRHSRTV--VGTDVAPRALALAAATLALSGV--RAELRE 208 Query: 155 SDWFSSVEG-LFDVIVSNPPYIES 177 W V G F +VSNPP++ Sbjct: 209 GPWLQPVAGRRFAHVVSNPPFVPG 232 >gi|284097326|ref|ZP_06385459.1| methyltransferase [Candidatus Poribacteria sp. WGA-A3] gi|283831164|gb|EFC35141.1| methyltransferase [Candidatus Poribacteria sp. WGA-A3] Length = 217 Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust. Identities = 19/72 (26%), Positives = 38/72 (52%), Gaps = 2/72 (2%) Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER--FDTLQSDWFS 159 LD+GTG + + L + P + +D+S + L+IAK + G+++R + + + Sbjct: 46 LDVGTGPAQIPILLAQRCPDIRITAIDLSEEMLKIAKRHVADAGLTDRITLELVDAKTLP 105 Query: 160 SVEGLFDVIVSN 171 + FD ++SN Sbjct: 106 YPDNTFDGLISN 117 >gi|18977544|ref|NP_578901.1| RNA methyltransferase [Pyrococcus furiosus DSM 3638] gi|50401622|sp|Q8U1N4|Y1172_PYRFU RecName: Full=Uncharacterized RNA methyltransferase PF1172 gi|18893255|gb|AAL81296.1| RNA methyltransferase [Pyrococcus furiosus DSM 3638] Length = 411 Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust. Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 4/74 (5%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 +++D+ +G G + L K+ K VG D + A+E+A NA N V F + SD Sbjct: 275 KVVDMYSGVGTFGVYLAKKG--MKVVGFDSNAFAIEMANKNAEINNVEAEF-FVASDREV 331 Query: 160 SVEGLFDVIVSNPP 173 ++G FD ++ +PP Sbjct: 332 DIKG-FDTVIVDPP 344 >gi|312875412|ref|ZP_07735416.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Lactobacillus iners LEAF 2053A-b] gi|311089075|gb|EFQ47515.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Lactobacillus iners LEAF 2053A-b] Length = 450 Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust. Identities = 31/95 (32%), Positives = 49/95 (51%), Gaps = 13/95 (13%) Query: 86 LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145 LA ++ DVV +D +G G + L++ K K +GV+I A++ AK NA+ NG Sbjct: 291 LAIQKAQLTANDVV--IDAYSGIGTIGLSVAKHVK--KVLGVEIVRDAVKDAKKNAILNG 346 Query: 146 VSE------RFDTLQSDWFSSVEGL-FDVIVSNPP 173 ++ + + L W + EGL DVI +PP Sbjct: 347 INNAEYFEGKAEELMPQWAN--EGLKTDVIFVDPP 379 >gi|225023544|ref|ZP_03712736.1| hypothetical protein EIKCOROL_00403 [Eikenella corrodens ATCC 23834] gi|224943685|gb|EEG24894.1| hypothetical protein EIKCOROL_00403 [Eikenella corrodens ATCC 23834] Length = 297 Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust. Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 11/75 (14%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSD 156 R+LD G G+G + +A LK GVDI +A+ ++SNA N + RF D L Sbjct: 166 RVLDYGCGSGILAIAALKLGAAVAD-GVDIDEQAIVASRSNAEQNEAAARFFLPDDLP-- 222 Query: 157 WFSSVEGLFDVIVSN 171 E +DV+V+N Sbjct: 223 -----EAEYDVVVAN 232 >gi|209524061|ref|ZP_03272612.1| Methyltransferase type 11 [Arthrospira maxima CS-328] gi|209495436|gb|EDZ95740.1| Methyltransferase type 11 [Arthrospira maxima CS-328] Length = 203 Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust. Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 3/63 (4%) Query: 94 EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153 E + ILD+G GTG + L K+ P +G G+D+S + ++ AK+ N +R L Sbjct: 41 EFPNSANILDIGCGTGRLLQRLAKQFPDLQGTGLDLSPQMIKEAKNQ---NVYGDRLQFL 97 Query: 154 QSD 156 Q + Sbjct: 98 QGN 100 >gi|307544769|ref|YP_003897248.1| ribosomal protein L11 methyltransferase [Halomonas elongata DSM 2581] gi|307216793|emb|CBV42063.1| ribosomal protein L11 methyltransferase [Halomonas elongata DSM 2581] Length = 304 Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust. Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 1/72 (1%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 +LD+G G+G + +A L+ G DI +AL ++ NA NGV E L+ Sbjct: 169 EVLDVGCGSGILAIAALRLG-ARHATGTDIDPQALTASRDNAERNGVDETALRLEYPESL 227 Query: 160 SVEGLFDVIVSN 171 E F ++V+N Sbjct: 228 EAEARFPLVVAN 239 >gi|282164174|ref|YP_003356559.1| putative methyltransferase [Methanocella paludicola SANAE] gi|282156488|dbj|BAI61576.1| putative methyltransferase [Methanocella paludicola SANAE] Length = 197 Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust. Identities = 29/76 (38%), Positives = 37/76 (48%), Gaps = 8/76 (10%) Query: 101 ILDLGTGTG--AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 + DLG GTG A+ LL K +G+D +ALEIAK NA V + F Sbjct: 50 VADLGCGTGVLAIGAGLLGTK---KIIGIDSDIRALEIAKKNASQLDVDIAWVCCDVRDF 106 Query: 159 SSVEGLFDVIVSNPPY 174 G FD +V NPP+ Sbjct: 107 C---GRFDTVVMNPPF 119 >gi|195437336|ref|XP_002066596.1| GK19357 [Drosophila willistoni] gi|194162681|gb|EDW77582.1| GK19357 [Drosophila willistoni] Length = 217 Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust. Identities = 30/106 (28%), Positives = 56/106 (52%), Gaps = 5/106 (4%) Query: 72 FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE-SPFFKGVGVDIS 130 +EP ++ LL+D AL L +E++ +++G+G+G + AL K+ S + DI+ Sbjct: 18 YEPAEDSFLLLD-ALEKDLQFLEEQQPHLCVEIGSGSGVIITALSKKFSNSALCLATDIN 76 Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYI 175 +A + KS A+ N + + L + + D++V NPPY+ Sbjct: 77 PRACKATKSTALKNHA--QVECLNCNLTQPLRKRSVDLLVFNPPYV 120 >gi|167568205|ref|ZP_02361079.1| methyltransferase [Burkholderia oklahomensis C6786] Length = 283 Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust. Identities = 31/98 (31%), Positives = 43/98 (43%), Gaps = 13/98 (13%) Query: 76 PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLA---LLKESPFFKGVGVDISCK 132 P ELLV++ + D +LD+G G GA LA LL E + VGVD+S Sbjct: 36 PFAELLVEA--------VRAGDGRHVLDVGCGAGATTLAVARLLGER--GRCVGVDVSEP 85 Query: 133 ALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170 + A+ A G RF + + FD I+S Sbjct: 86 LIAAARGRAEREGAPARFVRADAQTHAFAPASFDTIIS 123 >gi|163789936|ref|ZP_02184372.1| Putative methyltransferase [Carnobacterium sp. AT7] gi|159874876|gb|EDP68944.1| Putative methyltransferase [Carnobacterium sp. AT7] Length = 250 Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust. Identities = 25/101 (24%), Positives = 46/101 (45%), Gaps = 13/101 (12%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE--SPFFKGVGVDISCKALEIAKS 139 +D+ L + K D +++DL G G V L L ++ SP +G++I + +++A Sbjct: 32 LDAVLLADFAQPAKHDRAKVVDLCAGNGVVGLLLSQKTNSPI---IGIEIQERLVDMANR 88 Query: 140 NAVTNGVSERFDTLQSD------WFSSVEGLFDVIVSNPPY 174 NG+ ++ + D W + D + NPPY Sbjct: 89 TIQVNGLEKQVSIVHGDLSDASKWIK--KDTVDTLTCNPPY 127 >gi|156741118|ref|YP_001431247.1| methyltransferase small [Roseiflexus castenholzii DSM 13941] gi|156232446|gb|ABU57229.1| methyltransferase small [Roseiflexus castenholzii DSM 13941] Length = 198 Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust. Identities = 30/93 (32%), Positives = 43/93 (46%), Gaps = 2/93 (2%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 VD L I + ILDLG G G + + L + P + + VD A+ A+ NA Sbjct: 39 VDEGTDLFLRTIAPQTPQTILDLGCGCGVIGIVLARWFPQARVILVDRDLLAVRYARHNA 98 Query: 142 VTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPP 173 N + + + S F V + FD+IVSN P Sbjct: 99 ALNQ-TPNVEVIGSVGFEYVPDIPFDLIVSNIP 130 >gi|73661501|ref|YP_300282.1| SAM-dependent methyltransferase [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|72494016|dbj|BAE17337.1| putative SAM-dependent methyltransferase [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 240 Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust. Identities = 35/135 (25%), Positives = 64/135 (47%), Gaps = 9/135 (6%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 ++ILD+GTG G LA+L + G+D+S + ++ AK NA ++ F + ++ Sbjct: 47 MKILDIGTGAG--FLAILCGNLGSDVTGIDLSPEMIQSAKQNAESHHQDIHFQVMDAESL 104 Query: 159 SSVEGLFDVIVS-NPPYIESVIVDCLGLEVRDFDPR---ISLDG--GIDGLSHYRTIADG 212 + FD+++S N ++ +R P I++D G D + Y+++ Sbjct: 105 QFNDETFDMVISRNVTWLLPNTKAAYQEWLRVLKPNGKLINIDANYGNDSFTDYKSLNTE 164 Query: 213 VSRH-LNKDGLCSVE 226 + H L KD L E Sbjct: 165 HAHHTLGKDMLAESE 179 >gi|84998804|ref|XP_954123.1| hypothetical protein [Theileria annulata] gi|65305121|emb|CAI73446.1| hypothetical protein TA02905 [Theileria annulata] Length = 569 Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust. Identities = 18/65 (27%), Positives = 36/65 (55%), Gaps = 2/65 (3%) Query: 95 KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154 K +RI+D +G G + + + F +GV+++ +EI K N ++ GV ++D + Sbjct: 280 KNKDIRIIDAFSGIGGSLIPFI--NNFNYSLGVELNKNRVEICKDNILSYGVKNQYDLIH 337 Query: 155 SDWFS 159 D+F+ Sbjct: 338 DDFFN 342 >gi|88858407|ref|ZP_01133049.1| methylation of 50S ribosomal subunit protein L11 (ribosomal protein L11 methyltransferase) [Pseudoalteromonas tunicata D2] gi|88820024|gb|EAR29837.1| methylation of 50S ribosomal subunit protein L11 (ribosomal protein L11 methyltransferase) [Pseudoalteromonas tunicata D2] Length = 292 Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust. Identities = 34/112 (30%), Positives = 55/112 (49%), Gaps = 18/112 (16%) Query: 74 PRPET-ELLVDSALAFS----------LPRIEKRDVV--RILDLGTGTGAVCLALLKESP 120 P P +L+D LAF L +E D+ ++D G G+G + +A +K Sbjct: 122 PDPTAVNVLLDPGLAFGTGTHATTALCLEWLESLDLTGKTVVDFGCGSGILGIAAIKLGA 181 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFSSVEGLFDVIVSN 171 + +G+DI +ALE + NA NGV+ + + L D E + DV+V+N Sbjct: 182 A-RVIGIDIDPQALEASLDNAQRNGVAHQLEVYLPQD---QPEFMADVMVAN 229 >gi|158430598|pdb|2R3S|A Chain A, Crystal Structure Of A Putative O-Methyltransferase (Npun_r0239) From Nostoc Punctiforme Pcc 73102 At 2.15 A Resolution gi|158430599|pdb|2R3S|B Chain B, Crystal Structure Of A Putative O-Methyltransferase (Npun_r0239) From Nostoc Punctiforme Pcc 73102 At 2.15 A Resolution Length = 335 Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust. Identities = 20/64 (31%), Positives = 35/64 (54%), Gaps = 1/64 (1%) Query: 95 KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154 K + +++LD+ G +A+ + +P + GVD + LE+AK NA GV+ R+ T+ Sbjct: 163 KIEPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWAS-VLEVAKENARIQGVASRYHTIA 221 Query: 155 SDWF 158 F Sbjct: 222 GSAF 225 >gi|19920612|ref|NP_608733.1| CG9643 [Drosophila melanogaster] gi|7295871|gb|AAF51171.1| CG9643 [Drosophila melanogaster] gi|19527863|gb|AAL90046.1| AT11165p [Drosophila melanogaster] gi|220949650|gb|ACL87368.1| CG9643-PA [synthetic construct] gi|220958496|gb|ACL91791.1| CG9643-PA [synthetic construct] Length = 219 Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust. Identities = 25/79 (31%), Positives = 37/79 (46%) Query: 96 RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155 ++ R+LDLG G G + L E GVD S KA+E+A++ A N +S + Sbjct: 58 KEASRVLDLGCGNGMFLVGLANEGFTGDLTGVDYSPKAVELAQNIAEDNKLSITYKVADL 117 Query: 156 DWFSSVEGLFDVIVSNPPY 174 + G FDV+ Y Sbjct: 118 TQPQNELGQFDVVHDKGTY 136 >gi|115524138|ref|YP_781049.1| ribosomal L11 methyltransferase [Rhodopseudomonas palustris BisA53] gi|115518085|gb|ABJ06069.1| LSU ribosomal protein L11P methyltransferase [Rhodopseudomonas palustris BisA53] Length = 294 Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust. Identities = 25/85 (29%), Positives = 46/85 (54%), Gaps = 9/85 (10%) Query: 93 IEKRDVVRILDLGTGTGAVCLALLKES--PFFKGVGVDISCKALEIAKSNAVTNGVSERF 150 +++R++ +LDLGTGTG + +A K + P DI ++ +A NA NGV F Sbjct: 149 LKRRELRCVLDLGTGTGVLGIAAAKATHRPVLAS---DIDPVSVRVACDNAWLNGVGHLF 205 Query: 151 DTLQSDWFSS----VEGLFDVIVSN 171 + + + F+ + FD++++N Sbjct: 206 EGVCAAGFADARFRAKAPFDLVLAN 230 >gi|330465014|ref|YP_004402757.1| type 12 methyltransferase [Verrucosispora maris AB-18-032] gi|328807985|gb|AEB42157.1| methyltransferase type 12 [Verrucosispora maris AB-18-032] Length = 473 Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust. Identities = 19/50 (38%), Positives = 29/50 (58%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 R+LDLG G GA+ L+ + F + VG D+S +AL +A + + ER Sbjct: 295 RVLDLGCGGGALLATLIGDRRFTEIVGTDVSTQALSLAARRIRLDRLPER 344 >gi|220915009|ref|YP_002490317.1| Methyltransferase type 11 [Methylobacterium nodulans ORS 2060] gi|219952760|gb|ACL63150.1| Methyltransferase type 11 [Methylobacterium nodulans ORS 2060] Length = 254 Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust. Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 4/65 (6%) Query: 76 PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135 P+ L AL SL R DVV LDLG G G LAL+ E +G+G+D+S +E Sbjct: 34 PQRLLEYRLALVRSLARPRPSDVV--LDLGCGNGHHLLALVPE--VARGIGIDVSPGMIE 89 Query: 136 IAKSN 140 +A + Sbjct: 90 LAHAR 94 >gi|152972181|ref|YP_001337327.1| ribosomal protein L11 methyltransferase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|166223420|sp|A6TES6|PRMA_KLEP7 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11 Mtase gi|150957030|gb|ABR79060.1| ribosomal protein L11 methyltransferase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] Length = 293 Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust. Identities = 27/72 (37%), Positives = 44/72 (61%), Gaps = 4/72 (5%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159 ++D G G+G + +A LK K +G+DI +A++ ++ NA NGVSER + L D Sbjct: 162 VIDFGCGSGILAIAALKLG-AAKAIGIDIDPQAIQASRDNAQRNGVSERLELYLPQDQPE 220 Query: 160 SVEGLFDVIVSN 171 S++ DV+V+N Sbjct: 221 SMKA--DVVVAN 230 >gi|86132735|ref|ZP_01051327.1| RNA methyltransferase, TrmA family [Dokdonia donghaensis MED134] gi|85816689|gb|EAQ37875.1| RNA methyltransferase, TrmA family [Dokdonia donghaensis MED134] Length = 471 Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust. Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 8/79 (10%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV--SERF----DTLQ 154 + DL TGTG + + K++ K +GV+ A+ AK NA NG+ +E F + Sbjct: 327 VYDLYTGTGTIAQFVAKKAK--KVIGVEAVPDAITAAKENAKLNGIENAEFFVGDMKKVF 384 Query: 155 SDWFSSVEGLFDVIVSNPP 173 + F + G D+I+++PP Sbjct: 385 NSEFIATHGEPDIIITDPP 403 >gi|323702402|ref|ZP_08114067.1| ribosomal protein L11 methyltransferase [Desulfotomaculum nigrificans DSM 574] gi|323532708|gb|EGB22582.1| ribosomal protein L11 methyltransferase [Desulfotomaculum nigrificans DSM 574] Length = 308 Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust. Identities = 36/128 (28%), Positives = 61/128 (47%), Gaps = 13/128 (10%) Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 +D+GTGTG + + K K + VD+ A+++A+ N N V + + LQ + V Sbjct: 175 VDVGTGTGILAITAAKLG-AAKVIAVDLDEVAVQVARENVQRNQVQGQVEVLQGNLLDKV 233 Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG---IDGLSHYRTIADGVSRHLN 218 D++++N I VI+ L +VR +I GG G+ +R A+ V L Sbjct: 234 TQPVDLVIAN--IIAKVII-ILAPDVR----KILKPGGYFIASGIIRFR--AEEVREKLQ 284 Query: 219 KDGLCSVE 226 + G +E Sbjct: 285 EAGFKVLE 292 >gi|27378697|ref|NP_770226.1| hypothetical protein bll3586 [Bradyrhizobium japonicum USDA 110] gi|27351846|dbj|BAC48851.1| bll3586 [Bradyrhizobium japonicum USDA 110] Length = 533 Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust. Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 3/77 (3%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+L+LG G G L + + P + VGVD+S +E + N T G+S L D + Sbjct: 58 RVLELGCGVGGNLLPMAFQYPNSEFVGVDLSGVTIERGQRNIATLGLSN-IKLLHCDIMN 116 Query: 160 SVE--GLFDVIVSNPPY 174 E G FD I+++ Y Sbjct: 117 VDESFGQFDYIIAHGVY 133 >gi|239929819|ref|ZP_04686772.1| rRNA or tRNA methyltransferase [Streptomyces ghanaensis ATCC 14672] gi|291438151|ref|ZP_06577541.1| transferase [Streptomyces ghanaensis ATCC 14672] gi|291341046|gb|EFE68002.1| transferase [Streptomyces ghanaensis ATCC 14672] Length = 506 Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust. Identities = 36/132 (27%), Positives = 56/132 (42%), Gaps = 16/132 (12%) Query: 95 KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154 +R V LDLGTG+G L + + + D++ +AL I +G + + Sbjct: 163 RRPVSSALDLGTGSGIQALHATRHA--TRVTATDVNPRALHITALTLALSGAPA-AELRE 219 Query: 155 SDWFSSV--EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212 F+ V + +D+IVSNPP+ VI L R DGG+ G RT+ Sbjct: 220 GSLFTPVRDDETYDLIVSNPPF---VISPGARLTYR--------DGGMGGDDLCRTLVQE 268 Query: 213 VSRHLNKDGLCS 224 L++ G Sbjct: 269 AGERLSEGGFAQ 280 >gi|238896766|ref|YP_002921511.1| ribosomal protein L11 methyltransferase [Klebsiella pneumoniae NTUH-K2044] gi|262042816|ref|ZP_06015969.1| ribosomal protein L11 methyltransferase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|329997543|ref|ZP_08302821.1| ribosomal protein L11 methyltransferase [Klebsiella sp. MS 92-3] gi|238549093|dbj|BAH65444.1| ribosomal protein L11 methyltransferase [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|259039883|gb|EEW41001.1| ribosomal protein L11 methyltransferase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|328539026|gb|EGF65070.1| ribosomal protein L11 methyltransferase [Klebsiella sp. MS 92-3] Length = 293 Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust. Identities = 27/72 (37%), Positives = 44/72 (61%), Gaps = 4/72 (5%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159 ++D G G+G + +A LK K +G+DI +A++ ++ NA NGVSER + L D Sbjct: 162 VIDFGCGSGILAIAALKLG-AAKAIGIDIDPQAIQASRDNAQRNGVSERLELYLPQDQPE 220 Query: 160 SVEGLFDVIVSN 171 S++ DV+V+N Sbjct: 221 SMKA--DVVVAN 230 >gi|50294962|ref|XP_449892.1| hypothetical protein [Candida glabrata CBS 138] gi|49529206|emb|CAG62872.1| unnamed protein product [Candida glabrata] Length = 228 Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust. Identities = 33/131 (25%), Positives = 54/131 (41%), Gaps = 27/131 (20%) Query: 57 WRDFYNVRLTLSSDTFEPRPE----------------TELLVDSALAFSLPRIEKRDVVR 100 W DFY L FE PE E L+D+ ++ + Sbjct: 18 WDDFY----ALERQNFEKNPEDTGECWFNDNDAEEKMVEFLMDACGMHNISQ-----ECT 68 Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 ++DLGTG G + AL +E + +GVD S ++++ A + E Q+D F + Sbjct: 69 MIDLGTGNGHLLFALTEEGFHGQMLGVDYSEQSVKFANEIVANKELGEHLRFAQADIFDN 128 Query: 161 --VEGLFDVIV 169 G F+V++ Sbjct: 129 NWNPGKFNVVL 139 >gi|261838778|gb|ACX98544.1| hypothetical protein KHP_1356 [Helicobacter pylori 51] Length = 238 Score = 36.6 bits (83), Expect = 4.0, Method: Compositional matrix adjust. Identities = 26/103 (25%), Positives = 49/103 (47%), Gaps = 2/103 (1%) Query: 72 FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131 ++P DS + R ++ ILD+G+G G + L +++P V+ Sbjct: 9 YQPLNAYSYNSDSLFLYDFSRPFIKNSGAILDIGSGCGVLGLLCARDNPLASVHLVEKDS 68 Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174 K ++ NA+ ++ F++ D+ + L+DVIV NPP+ Sbjct: 69 KMAFCSQKNAIKFPNAQVFESDFLDFNPPI--LYDVIVCNPPF 109 >gi|260770654|ref|ZP_05879585.1| ribosomal protein L11 methyltransferase [Vibrio furnissii CIP 102972] gi|260614380|gb|EEX39568.1| ribosomal protein L11 methyltransferase [Vibrio furnissii CIP 102972] Length = 295 Score = 36.6 bits (83), Expect = 4.0, Method: Compositional matrix adjust. Identities = 27/73 (36%), Positives = 41/73 (56%), Gaps = 6/73 (8%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159 ++D G G+G + +A +K K +G+DI +AL +K NA NGV + + L D Sbjct: 163 VIDFGCGSGILAIAAIKLG-AAKVIGIDIDPQALLASKDNASRNGVEDLIEVYLPKD--- 218 Query: 160 SVEGLF-DVIVSN 171 EGL DV+V+N Sbjct: 219 QPEGLVADVVVAN 231 >gi|254360891|ref|ZP_04977037.1| ribosomal protein L11 methyltransferase [Mannheimia haemolytica PHL213] gi|153092370|gb|EDN73433.1| ribosomal protein L11 methyltransferase [Mannheimia haemolytica PHL213] Length = 293 Score = 36.6 bits (83), Expect = 4.0, Method: Compositional matrix adjust. Identities = 23/72 (31%), Positives = 42/72 (58%), Gaps = 4/72 (5%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159 ++D G G+G + +A LK + +G+DI +A+ +++NA NGV+E+ L D Sbjct: 162 VIDFGCGSGILAIAALKLGAK-QAIGIDIDPQAILASQNNAEANGVAEKLQLFLAKDQPR 220 Query: 160 SVEGLFDVIVSN 171 ++ DV+V+N Sbjct: 221 ELQA--DVVVAN 230 >gi|125558476|gb|EAZ04012.1| hypothetical protein OsI_26151 [Oryza sativa Indica Group] Length = 358 Score = 36.6 bits (83), Expect = 4.0, Method: Compositional matrix adjust. Identities = 21/74 (28%), Positives = 40/74 (54%), Gaps = 1/74 (1%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +L++G GTG + + LL ESP + V+I + ++ + G++ + +++D + Sbjct: 67 VLEVGPGTGNLTVRLL-ESPAARVSAVEIDPRMVDAVTARVDALGLAHKLTVIRADAVEA 125 Query: 161 VEGLFDVIVSNPPY 174 FDV V+N PY Sbjct: 126 EFPEFDVCVANIPY 139 >gi|189463386|ref|ZP_03012171.1| hypothetical protein BACCOP_04105 [Bacteroides coprocola DSM 17136] gi|189429815|gb|EDU98799.1| hypothetical protein BACCOP_04105 [Bacteroides coprocola DSM 17136] Length = 489 Score = 36.6 bits (83), Expect = 4.0, Method: Compositional matrix adjust. Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 10/80 (12%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF-------DTL 153 + DL TGTG + + +++ K +G++ +A+E AK N+ NG+ D L Sbjct: 346 VYDLYTGTGTIANFVSRQAR--KVIGIEYVPEAIEDAKVNSQINGIENTLFYAGDMKDIL 403 Query: 154 QSDWFSSVEGLFDVIVSNPP 173 D F + G DVI+++PP Sbjct: 404 TQD-FINEHGRPDVIITDPP 422 >gi|328717362|ref|XP_003246183.1| PREDICTED: hypothetical protein LOC100573105 [Acyrthosiphon pisum] Length = 592 Score = 36.6 bits (83), Expect = 4.0, Method: Compositional matrix adjust. Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 14/104 (13%) Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF---SSVEGLFDVIVSNPPYIES 177 F K + VDI + +AK NA GV ++ + + D+F + ++G DVIV++PP+ Sbjct: 239 FDKVIAVDIDADKIIMAKQNAAIYGVGDKIEFIVGDYFKLENQIKG--DVIVTSPPW--- 293 Query: 178 VIVDCLGLEVRDFDPRISLDGGIDG-LSHYRTIADGVSRHLNKD 220 G E D LD +D L +TIA + HL K+ Sbjct: 294 -----GGPEYSKMDVIGPLDLYMDKILEVGKTIAPKILLHLPKN 332 >gi|323356746|ref|YP_004223142.1| 16S RNA G1207 methylase RsmC [Microbacterium testaceum StLB037] gi|323273117|dbj|BAJ73262.1| 16S RNA G1207 methylase RsmC [Microbacterium testaceum StLB037] Length = 214 Score = 36.6 bits (83), Expect = 4.0, Method: Compositional matrix adjust. Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 2/72 (2%) Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 LDLG G G + L+L SP VD++ +AL++ + NA + G++ D + Sbjct: 64 LDLGCGWGPISLSLALSSPHATVWAVDVNERALDLVRRNAESLGLTNVNAVRPEDVPDDI 123 Query: 162 EGLFDVIVSNPP 173 F I SNPP Sbjct: 124 A--FRTIRSNPP 133 >gi|323140329|ref|ZP_08075261.1| methyltransferase domain protein [Phascolarctobacterium sp. YIT 12067] gi|322415187|gb|EFY05974.1| methyltransferase domain protein [Phascolarctobacterium sp. YIT 12067] Length = 242 Score = 36.6 bits (83), Expect = 4.0, Method: Compositional matrix adjust. Identities = 25/107 (23%), Positives = 52/107 (48%), Gaps = 7/107 (6%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 D+ + P + ++ ++L+LG GTGA+ + LL+ + +D + + + + + Sbjct: 31 TDAIFLGNFPHVVRK--AKVLELGCGTGAISM-LLESRGAAEVTALDCNPQVTRLVRQSV 87 Query: 142 VTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPYIESVIVDCLG 184 N + ++F + D + + L D++ SNPPY S V +G Sbjct: 88 ADNSLQDKFTVIDGDLRNYKQLLQPESMDLVASNPPYRNSGNVRQVG 134 >gi|268323315|emb|CBH36903.1| conserved hypothetical protein, methyltransferase domain family [uncultured archaeon] Length = 253 Score = 36.6 bits (83), Expect = 4.0, Method: Compositional matrix adjust. Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 2/72 (2%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 + ILD+GTGTG LALL K G+DIS LE ++ NA ++ F ++ Sbjct: 52 LNILDVGTGTG--FLALLFAELGHKVTGIDISKSMLEKSRCNAYKQKLAVNFMHGDAENL 109 Query: 159 SSVEGLFDVIVS 170 +G FD++++ Sbjct: 110 PFDDGSFDIVMN 121 >gi|328863963|gb|EGG13062.1| hypothetical protein MELLADRAFT_32299 [Melampsora larici-populina 98AG31] Length = 222 Score = 36.6 bits (83), Expect = 4.1, Method: Compositional matrix adjust. Identities = 43/180 (23%), Positives = 83/180 (46%), Gaps = 24/180 (13%) Query: 70 DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL---ALLKESPFFKGVG 126 D +EP +T +L+D AL L ++ + +++G+G+G V + +L P + Sbjct: 17 DVYEPAEDTFILLD-ALEADLDFLKALKPLICVEIGSGSGCVSVFAQKILSGIPTLH-IC 74 Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVDCLG 184 DI+ KAL + S N +S + +++ +S+ + D+++ NPPY+E+ Sbjct: 75 TDINSKALTVTDSTFQKNSLSTP-NLVRTSLLNSLRLQSSVDLLLFNPPYVET------- 126 Query: 185 LEVRDFDP------RISLDGGIDGLSHYRTIADGVSRHL--NKDGLCSVEIGYNQKVDVV 236 +F+ S GG +G+ + D + L N+ L V I N+ ++V Sbjct: 127 -STEEFEQATQGHIEASWAGGANGMELTNQLLDSLPSILSPNRGVLYLVAIKQNKPEEIV 185 >gi|224143306|ref|XP_002324910.1| predicted protein [Populus trichocarpa] gi|222866344|gb|EEF03475.1| predicted protein [Populus trichocarpa] Length = 386 Score = 36.6 bits (83), Expect = 4.1, Method: Compositional matrix adjust. Identities = 39/150 (26%), Positives = 68/150 (45%), Gaps = 14/150 (9%) Query: 35 RFFLTNAIVR--SLKHESIHRILGWRDFYNVRLT----LSSDTFEPRPETE-LLVDSALA 87 +F+L +I+R SL+ + D Y R T D F + + + LL + + Sbjct: 12 QFYLIQSILRQNSLRQLRTKPTHHYNDKYRTRNTKEDKQQDDLFLYKSKGQHLLTNQRIL 71 Query: 88 FSLPR---IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN 144 S+ R I D V L++G GTG + L LL + K V V+I + + + + Sbjct: 72 DSIVRKSSINPTDTV--LEIGPGTGNLTLKLLDVAS--KVVAVEIDKRMVGVLNKRVKEH 127 Query: 145 GVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174 G ++ ++ D + FD++V+N PY Sbjct: 128 GFEDKLSVIREDALKAEFPKFDLVVANIPY 157 >gi|152991152|ref|YP_001356874.1| ribosomal protein L11 methyltransferase [Nitratiruptor sp. SB155-2] gi|166223425|sp|A6Q4V8|PRMA_NITSB RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11 Mtase gi|151423013|dbj|BAF70517.1| ribosomal protein L11 methyltransferase [Nitratiruptor sp. SB155-2] Length = 280 Score = 36.6 bits (83), Expect = 4.1, Method: Compositional matrix adjust. Identities = 40/145 (27%), Positives = 70/145 (48%), Gaps = 30/145 (20%) Query: 72 FEPRP-ETELLVDSALAFS----------LPRIEK--RDVVRILDLGTGTGAVCLALLKE 118 +EP+ +T + +D ALAF L I+K + + +LD+G G+G + +A K Sbjct: 105 YEPKEGKTNIKIDPALAFGSGHHETTRGCLNAIQKYVQPGMELLDVGCGSGILSIAAAK- 163 Query: 119 SPFFKGVGVDI---SCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYI 175 KG VDI ALE ++ N NGV R + S ++ + +D++++N Sbjct: 164 ----KGAVVDICDTDALALEESQKNFSLNGVEFREGWVGS--AANAKKKYDIVIAN---- 213 Query: 176 ESVIVDCLGLEVRDFDPRISLDGGI 200 ++ D L + +D + +GGI Sbjct: 214 --IVADVLIMIAKDL-QETTKEGGI 235 >gi|148269384|ref|YP_001243844.1| methyltransferase type 11 [Thermotoga petrophila RKU-1] gi|147734928|gb|ABQ46268.1| Methyltransferase type 11 [Thermotoga petrophila RKU-1] Length = 216 Score = 36.6 bits (83), Expect = 4.1, Method: Compositional matrix adjust. Identities = 31/86 (36%), Positives = 43/86 (50%), Gaps = 13/86 (15%) Query: 96 RDVVRILDLGTGTGAVCLALLKESPFFKGVGV----DISCKALEIAKSNAVTNGVS---E 148 +DV +L+LG+G G V AL K + VGV ++ KALE N + VS Sbjct: 37 KDVRNVLELGSGVGTVSFALAKLY-NVQVVGVEKEKELYEKALEGISLNKLEGKVSFVNS 95 Query: 149 RFDTLQSDWFSSVEGLFDVIVSNPPY 174 + L W S FD++VSNPP+ Sbjct: 96 SVEELPFPWES-----FDMVVSNPPH 116 >gi|113460711|ref|YP_718777.1| ribosomal protein L11 methyltransferase [Haemophilus somnus 129PT] gi|122945185|sp|Q0I1Y6|PRMA_HAES1 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11 Mtase gi|112822754|gb|ABI24843.1| [LSU ribosomal protein L11P]-lysine N-methyltransferase [Haemophilus somnus 129PT] Length = 296 Score = 36.6 bits (83), Expect = 4.1, Method: Compositional matrix adjust. Identities = 23/71 (32%), Positives = 39/71 (54%), Gaps = 2/71 (2%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 ++D G G+G + +A LK VG+DI +A+ + +NA NGV+ER S+ Sbjct: 162 VIDFGCGSGILAIAALKLGAK-SAVGIDIDPQAILASYNNAEQNGVAERLQLFLSE-EKP 219 Query: 161 VEGLFDVIVSN 171 + DV+++N Sbjct: 220 TDLQADVVIAN 230 >gi|312278880|gb|ADQ63537.1| DNA methyltransferase signature protein [Streptococcus thermophilus ND03] Length = 254 Score = 36.6 bits (83), Expect = 4.1, Method: Compositional matrix adjust. Identities = 27/103 (26%), Positives = 53/103 (51%), Gaps = 11/103 (10%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCL--ALLKESPFFKGVGVDISCKALEIAKS 139 +DS L P+I K+ + I+DL +G GAV L + E+P + V++ + ++AK Sbjct: 33 IDSVLLSRFPKIPKKGL--IVDLCSGNGAVGLFASTRTEAPI---ILVELQERLADMAKR 87 Query: 140 NAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIESV 178 + N + ++ + D + ++ D+I+ NPPY ++ Sbjct: 88 SVTLNQLEDQVTVVNDDLKNLLDHAPRSQVDLILCNPPYFKAT 130 >gi|307354695|ref|YP_003895746.1| type 11 methyltransferase [Methanoplanus petrolearius DSM 11571] gi|307157928|gb|ADN37308.1| Methyltransferase type 11 [Methanoplanus petrolearius DSM 11571] Length = 288 Score = 36.6 bits (83), Expect = 4.1, Method: Compositional matrix adjust. Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 10/83 (12%) Query: 95 KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154 K + R+LD+G G GA+ + L + +DIS K LE K NA G+S ++ Sbjct: 66 KPEGARVLDIGCGPGALAIPLARAGADV--TAIDISSKTLEYLKDNAEKEGLS--VHPVK 121 Query: 155 SDWFSS------VEGLFDVIVSN 171 W+++ FD+++S+ Sbjct: 122 CHWWTADIDELGFRDQFDLVISS 144 >gi|307352202|ref|YP_003893253.1| type 11 methyltransferase [Methanoplanus petrolearius DSM 11571] gi|307155435|gb|ADN34815.1| Methyltransferase type 11 [Methanoplanus petrolearius DSM 11571] Length = 188 Score = 36.6 bits (83), Expect = 4.1, Method: Compositional matrix adjust. Identities = 22/58 (37%), Positives = 31/58 (53%), Gaps = 2/58 (3%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 +L+ G GTGA + K SP + VDIS K+LE+AK+ G + + L D F Sbjct: 41 VLEAGCGTGAQTPVITKNSPGAVIISVDISQKSLEVAKNRTTAEGRAGEY--LNCDIF 96 >gi|312115804|ref|YP_004013400.1| methyltransferase small [Rhodomicrobium vannielii ATCC 17100] gi|311220933|gb|ADP72301.1| methyltransferase small [Rhodomicrobium vannielii ATCC 17100] Length = 307 Score = 36.6 bits (83), Expect = 4.1, Method: Compositional matrix adjust. Identities = 47/175 (26%), Positives = 75/175 (42%), Gaps = 17/175 (9%) Query: 11 LCRVTGLSSHQVIVD---PDSVLDDRQR--FFLTNAIVRSLKHESIHRILGWRDFYNVR- 64 + +V G +SH + S LD R R A+ +L + S H +L + Sbjct: 1 MDQVLGQASHNPVAAGGASPSALDRRARPQSGFRKALRSTLHYLSYHFVLNHEGTQRAKA 60 Query: 65 ----LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120 L + F PR + A + ++ R V + D+GTG+G + LA + Sbjct: 61 AGFMLEVPPTVFHPR---YFISSETFAHFIDGLDLRGKV-VADIGTGSGILALAAARAGA 116 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPP 173 F + +DI+ A + A NA TNG L S+ ++ +FDVI S+PP Sbjct: 117 DFV-LALDINPNAADAAVQNAETNGYGPNVKGLCSNLMDAIPARPIFDVIFSSPP 170 >gi|327481990|gb|AEA85300.1| ribosomal protein L11 methyltransferase [Pseudomonas stutzeri DSM 4166] Length = 293 Score = 36.6 bits (83), Expect = 4.1, Method: Compositional matrix adjust. Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 15/91 (16%) Query: 74 PRPET-ELLVDSALAF---SLPRI---------EKRDVVRILDLGTGTGAVCLALLKESP 120 P P+ LL+D LAF + P + D +LD G G+G + +A L Sbjct: 121 PEPDAVNLLLDPGLAFGTGTHPTTALCLEWLDAQTLDDRSLLDFGCGSGILAIAGLLLG- 179 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVS-ERF 150 + VG DI +ALE ++ NA NG++ ERF Sbjct: 180 AHQAVGTDIDPQALEASRDNAERNGIAPERF 210 >gi|320590842|gb|EFX03285.1| methyltransferase type 12 [Grosmannia clavigera kw1407] Length = 434 Score = 36.6 bits (83), Expect = 4.1, Method: Compositional matrix adjust. Identities = 24/71 (33%), Positives = 33/71 (46%), Gaps = 5/71 (7%) Query: 88 FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147 F L I + ILD+GTGTG + + + P + VGVDIS + AV + V Sbjct: 154 FELTSIRLHNPRYILDVGTGTGEWAIGMGEAYPHCEVVGVDISA-----IQPTAVPHNVF 208 Query: 148 ERFDTLQSDWF 158 D + DW Sbjct: 209 FEVDDCEIDWM 219 >gi|294461690|gb|ADE76404.1| unknown [Picea sitchensis] Length = 390 Score = 36.6 bits (83), Expect = 4.1, Method: Compositional matrix adjust. Identities = 20/79 (25%), Positives = 41/79 (51%), Gaps = 2/79 (2%) Query: 96 RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155 R+ +L++G GTG + L LL+ + + + V+I + +E +++R + ++ Sbjct: 96 RETDTVLEIGPGTGNLTLELLQAA--RRVIAVEIDPRMIEAVHKRVQGTEMAQRLELVRG 153 Query: 156 DWFSSVEGLFDVIVSNPPY 174 D + FD+ V+N PY Sbjct: 154 DILRTDLPSFDICVANIPY 172 >gi|221639995|ref|YP_002526257.1| LSU ribosomal protein L11P methyltransferase [Rhodobacter sphaeroides KD131] gi|221160776|gb|ACM01756.1| LSU ribosomal protein L11P methyltransferase [Rhodobacter sphaeroides KD131] Length = 291 Score = 36.6 bits (83), Expect = 4.1, Method: Compositional matrix adjust. Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 4/76 (5%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++ D+G GT + +A + P + + DI A+E+A++N NG+ R L++ F Sbjct: 151 KVADVGCGTAVLAMAAARVFPEAQVLASDIDEVAVEVAEANVAINGLEGRVACLEAAGFD 210 Query: 160 SVE----GLFDVIVSN 171 E FD++ +N Sbjct: 211 HPEIAAAAPFDLVFAN 226 >gi|125600382|gb|EAZ39958.1| hypothetical protein OsJ_24395 [Oryza sativa Japonica Group] Length = 358 Score = 36.6 bits (83), Expect = 4.1, Method: Compositional matrix adjust. Identities = 21/74 (28%), Positives = 40/74 (54%), Gaps = 1/74 (1%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +L++G GTG + + LL ESP + V+I + ++ + G++ + +++D + Sbjct: 67 VLEVGPGTGNLTVRLL-ESPAARVSAVEIDPRMVDAVTARVDALGLAHKLTVIRADAVEA 125 Query: 161 VEGLFDVIVSNPPY 174 FDV V+N PY Sbjct: 126 EFPEFDVCVANIPY 139 >gi|147921607|ref|YP_684576.1| N6 adenine-specific DNA methyltransferase [uncultured methanogenic archaeon RC-I] gi|110619972|emb|CAJ35250.1| predicted N6 adenine-specific DNA methyltransferase [uncultured methanogenic archaeon RC-I] Length = 225 Score = 36.6 bits (83), Expect = 4.1, Method: Compositional matrix adjust. Identities = 29/96 (30%), Positives = 42/96 (43%), Gaps = 29/96 (30%) Query: 101 ILDLGTGTG--AVCLALLKESPFF----KGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154 ++DLG GTG A+ LLK+ K +G+D +ALE+AK+NA + G Sbjct: 50 VIDLGCGTGILAIGARLLKDDAGMDSTQKVIGIDSDIRALEVAKANAESLGT-------D 102 Query: 155 SDWFS----------------SVEGLFDVIVSNPPY 174 DW + FD +V NPP+ Sbjct: 103 VDWVHCDVRDVNNIPEIAVVLNAGSRFDTVVMNPPF 138 >gi|55377789|ref|YP_135639.1| protein-L-isoaspartate O-methyltransferase [Haloarcula marismortui ATCC 43049] gi|55230514|gb|AAV45933.1| protein-L-isoaspartate O-methyltransferase [Haloarcula marismortui ATCC 43049] Length = 204 Score = 36.6 bits (83), Expect = 4.1, Method: Compositional matrix adjust. Identities = 25/53 (47%), Positives = 30/53 (56%), Gaps = 4/53 (7%) Query: 94 EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146 E DVV LDLGTGTGA+ AL ++ +G DIS LE A+ A GV Sbjct: 42 ESDDVV--LDLGTGTGAIAFALASDAAEI--IGRDISDGMLEKAREKADGRGV 90 >gi|146277274|ref|YP_001167433.1| ribosomal L11 methyltransferase [Rhodobacter sphaeroides ATCC 17025] gi|145555515|gb|ABP70128.1| LSU ribosomal protein L11P methyltransferase [Rhodobacter sphaeroides ATCC 17025] Length = 291 Score = 36.6 bits (83), Expect = 4.1, Method: Compositional matrix adjust. Identities = 21/76 (27%), Positives = 38/76 (50%), Gaps = 4/76 (5%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++ D+G GT + +A P + DI A+E+A++N NG+ R L++ F Sbjct: 151 KVADVGCGTAVLAMAAASVFPEALVIASDIDEVAVEVAEANVAINGLGGRVTCLEAAGFD 210 Query: 160 ----SVEGLFDVIVSN 171 + E FD++ +N Sbjct: 211 HPRLAAEAPFDLVFAN 226 >gi|292659116|gb|ADE34498.1| SsfM2 [Streptomyces sp. SF2575] Length = 331 Score = 36.6 bits (83), Expect = 4.2, Method: Compositional matrix adjust. Identities = 24/70 (34%), Positives = 33/70 (47%), Gaps = 1/70 (1%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 V ++D+G G G + ALLK P KG VD +E AK GV++R T + Sbjct: 165 VKHVVDVGGGNGTLLAALLKGRPHLKGTVVD-RPHPIEGAKRKLAAEGVADRASTSAQSF 223 Query: 158 FSSVEGLFDV 167 F + DV Sbjct: 224 FDPLPKGGDV 233 >gi|317055875|ref|YP_004104342.1| type 11 methyltransferase [Ruminococcus albus 7] gi|315448144|gb|ADU21708.1| Methyltransferase type 11 [Ruminococcus albus 7] Length = 436 Score = 36.2 bits (82), Expect = 4.2, Method: Compositional matrix adjust. Identities = 19/53 (35%), Positives = 29/53 (54%) Query: 90 LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142 L IEK +LD G GTG + L ++ P + G+D++ K +EIAK + Sbjct: 40 LAEIEKEPFNDLLDCGCGTGPMLTLLHRKYPDKRYTGIDLTPKMIEIAKRKKM 92 >gi|304394132|ref|ZP_07376055.1| 3-demethylubiquinone-9 3-O-methyltransferase [Ahrensia sp. R2A130] gi|303293572|gb|EFL87949.1| 3-demethylubiquinone-9 3-O-methyltransferase [Ahrensia sp. R2A130] Length = 255 Score = 36.2 bits (82), Expect = 4.2, Method: Compositional matrix adjust. Identities = 22/72 (30%), Positives = 39/72 (54%), Gaps = 2/72 (2%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 +RILD+G G G +C L + + VG D +E+AK +A +GVS + ++ Sbjct: 73 LRILDIGCGGGLLCEPLARMGA--EVVGADAGETNIEVAKLHAAQSGVSVDYRATTAEAL 130 Query: 159 SSVEGLFDVIVS 170 ++ FDV+++ Sbjct: 131 AASGETFDVVLN 142 >gi|222480516|ref|YP_002566753.1| methylase [Halorubrum lacusprofundi ATCC 49239] gi|222453418|gb|ACM57683.1| methylase [Halorubrum lacusprofundi ATCC 49239] Length = 199 Score = 36.2 bits (82), Expect = 4.2, Method: Compositional matrix adjust. Identities = 37/142 (26%), Positives = 60/142 (42%), Gaps = 17/142 (11%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+L++GTG+G V + +E VG D++ A A+ V V++ ++D Sbjct: 44 RVLEVGTGSGWVAQQIAEER-GLDTVGSDLNPHAARQARERGVEGVVADLLSPYRAD--- 99 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 FD + NPPY+ + + G + +L GG G D V R L Sbjct: 100 ----AFDTVCFNPPYLPTDPDNEWGDWMEH-----ALSGGESGRELIEPFLDDVGRVLAP 150 Query: 220 DG----LCSVEIGYNQKVDVVR 237 G L S GY++ + +V Sbjct: 151 GGVVLLLVSSLTGYDEVLALVE 172 >gi|327470556|gb|EGF16012.1| glycerophosphoryl diester phosphodiesterase [Streptococcus sanguinis SK330] Length = 326 Score = 36.2 bits (82), Expect = 4.2, Method: Compositional matrix adjust. Identities = 26/107 (24%), Positives = 49/107 (45%), Gaps = 11/107 (10%) Query: 145 GVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC-----LGLEVRDFDPRISLDGG 199 G+++ FD ++DW S+ + D + PY+E+ I LG + +FD ++S D Sbjct: 44 GLAQTFDESKADWESNTAAMIDPPMH--PYLENTISSMQAAFDLGADAVEFDVKLSKDKQ 101 Query: 200 I----DGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 + D ++T +G + L ++IGY D + + R Sbjct: 102 LAVFHDATLEFKTGIEGEIQDYTMAELKKMDIGYGYTADGGKTYPFR 148 >gi|223039768|ref|ZP_03610053.1| methyltransferase small domain family [Campylobacter rectus RM3267] gi|222878960|gb|EEF14056.1| methyltransferase small domain family [Campylobacter rectus RM3267] Length = 231 Score = 36.2 bits (82), Expect = 4.2, Method: Compositional matrix adjust. Identities = 28/74 (37%), Positives = 41/74 (55%), Gaps = 1/74 (1%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LD+G G+G + L L ++ P +DI + +A +NA NG+ F T F S Sbjct: 32 VLDVGCGSGVLGLLLKRDFPKISLSLLDILEANVNLAAANASQNGLEAEFITADFAKFKS 91 Query: 161 VEGLFDVIVSNPPY 174 E FD+IVSNPP+ Sbjct: 92 -EKRFDLIVSNPPF 104 >gi|148377836|ref|YP_001256712.1| modification (methylase) protein of type irestriction-modification system HsdM [Mycoplasma agalactiae PG2] gi|148291882|emb|CAL59273.1| Modification (Methylase) protein of type Irestriction modification system HsdM [Mycoplasma agalactiae PG2] Length = 892 Score = 36.2 bits (82), Expect = 4.2, Method: Composition-based stats. Identities = 31/122 (25%), Positives = 53/122 (43%), Gaps = 26/122 (21%) Query: 93 IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI-------AKSNAVTNG 145 ++ R V+++ D +G+G++ L + +E + +S A E+ + N + Sbjct: 231 LKDRKVIKVYDPTSGSGSLLLTIGQEFKKYNSGNSPVSYYAQELKAEVFNLTRMNLIMKN 290 Query: 146 VS------ERFDTLQSDW-------FSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFD 191 +S DTL+ DW +SS + L D +VSNPPY + E D Sbjct: 291 ISPTEIHARNGDTLEQDWPMFENNDYSSYQHLSVDAVVSNPPYSQK-----WNAEKHTLD 345 Query: 192 PR 193 PR Sbjct: 346 PR 347 >gi|305666421|ref|YP_003862708.1| putative RNA methyltransferase [Maribacter sp. HTCC2170] gi|88708684|gb|EAR00919.1| putative RNA methyltransferase [Maribacter sp. HTCC2170] Length = 469 Score = 36.2 bits (82), Expect = 4.2, Method: Compositional matrix adjust. Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 10/80 (12%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG-------VSERFDTL 153 + DL TGTG + + K++ K +G++ +A+E AK+NA N V + + Sbjct: 326 VYDLYTGTGTIAQFVSKKAK--KVIGIESVPEAIEDAKANAANNKIDNVDFFVGDMKNVF 383 Query: 154 QSDWFSSVEGLFDVIVSNPP 173 D F + G D+I+++PP Sbjct: 384 NED-FINAHGSPDIIITDPP 402 >gi|170717872|ref|YP_001784928.1| ribosomal protein L11 methyltransferase [Haemophilus somnus 2336] gi|189037697|sp|B0UV84|PRMA_HAES2 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11 Mtase gi|168826001|gb|ACA31372.1| ribosomal protein L11 methyltransferase [Haemophilus somnus 2336] Length = 296 Score = 36.2 bits (82), Expect = 4.2, Method: Compositional matrix adjust. Identities = 23/71 (32%), Positives = 39/71 (54%), Gaps = 2/71 (2%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 ++D G G+G + +A LK VG+DI +A+ + +NA NGV+ER S+ Sbjct: 162 VIDFGCGSGILAIAALKLGAK-SAVGIDIDPQAILASYNNAEQNGVAERLQLFLSE-EKP 219 Query: 161 VEGLFDVIVSN 171 + DV+++N Sbjct: 220 TDLQADVVIAN 230 >gi|65317304|ref|ZP_00390263.1| COG2890: Methylase of polypeptide chain release factors [Bacillus anthracis str. A2012] Length = 81 Score = 36.2 bits (82), Expect = 4.2, Method: Composition-based stats. Identities = 26/83 (31%), Positives = 37/83 (44%), Gaps = 15/83 (18%) Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246 V++ +P+ +L GG DGL YR + + L K + + EIG Q DV K L Sbjct: 2 VKEHEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEIGVGQGEDV-------KGLL 54 Query: 247 VNAFK--------DYGGNDRVLL 261 AF D G DR++ Sbjct: 55 QQAFPHAHVEVVFDINGKDRMVF 77 >gi|330887823|gb|EGH20484.1| ribosomal RNA small subunit methyltransferase C [Pseudomonas syringae pv. mori str. 301020] Length = 232 Score = 36.2 bits (82), Expect = 4.3, Method: Compositional matrix adjust. Identities = 26/105 (24%), Positives = 44/105 (41%), Gaps = 2/105 (1%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 +D A L I+K +LD G G G + A+ + P + +D+ A ++ Sbjct: 76 LDRGSALLLENIDKLPSGNLLDFGCGAGVLGAAVKRRYPHNDVIMLDVDAFATASSRLTL 135 Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLE 186 NG+ + L D + + I+SNPP+ V D + E Sbjct: 136 AANGLQAQ--VLTGDGIDAAPMGLNTILSNPPFHVGVHTDYMATE 178 >gi|323340759|ref|ZP_08081011.1| type I restriction-modification system DNA-methyltransferase [Lactobacillus ruminis ATCC 25644] gi|323091882|gb|EFZ34502.1| type I restriction-modification system DNA-methyltransferase [Lactobacillus ruminis ATCC 25644] Length = 556 Score = 36.2 bits (82), Expect = 4.3, Method: Compositional matrix adjust. Identities = 39/157 (24%), Positives = 62/157 (39%), Gaps = 34/157 (21%) Query: 47 KHESIHRILGWRDFYNVRLT--------LSSDTFEPRPETELLVDSALAFSLPRIEKRDV 98 K E+ H ILG D Y + + F P + +L A P IE +V Sbjct: 174 KDEAGHDILG--DIYEYLIAEFAGNAGKKGGEFFTPHQVSLVLAKIIAANMDPEIEHPEV 231 Query: 99 VRILDLGTGTGAVCLALLKESPF--------FKGVGVDISCKALEIAKSNAVTNGVSERF 150 D G+G++ L + E + G +++ +A+ N + +GV + Sbjct: 232 Y---DFACGSGSLLLTVEDELQIPGSQKRRRVRYYGQELNTTNYNMARMNLMMHGVDYQM 288 Query: 151 ------DTLQSDWFSSVEG-------LFDVIVSNPPY 174 DTL++DW V FD +V+NPPY Sbjct: 289 MDLRNADTLENDWPDGVGNDNIDHPHFFDAVVANPPY 325 >gi|218893724|ref|YP_002442593.1| putative ribosomal RNA small subunit methyltransferase C [Pseudomonas aeruginosa LESB58] gi|226712962|sp|B7V0H2|RSMC_PSEA8 RecName: Full=Ribosomal RNA small subunit methyltransferase C; AltName: Full=16S rRNA m2G1207 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rsmC gi|218773952|emb|CAW29766.1| putative ribosomal RNA small subunit methyltransferase C [Pseudomonas aeruginosa LESB58] Length = 332 Score = 36.2 bits (82), Expect = 4.3, Method: Compositional matrix adjust. Identities = 22/81 (27%), Positives = 37/81 (45%), Gaps = 2/81 (2%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LD G G G + AL + P + +D+ A+E ++ NG+ + + +D Sbjct: 195 LLDFGCGAGVLGAALKRRYPASRLTLLDVDAFAVESSRLTLAANGLDG--EVIAADGIDG 252 Query: 161 VEGLFDVIVSNPPYIESVIVD 181 IVSNPP+ + V D Sbjct: 253 APRELAAIVSNPPFHQGVHTD 273 >gi|218440731|ref|YP_002379060.1| methyltransferase type 11 [Cyanothece sp. PCC 7424] gi|218173459|gb|ACK72192.1| Methyltransferase type 11 [Cyanothece sp. PCC 7424] Length = 440 Score = 36.2 bits (82), Expect = 4.3, Method: Compositional matrix adjust. Identities = 18/48 (37%), Positives = 30/48 (62%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148 ILD+ GTG L L + +P K +GVDIS +++++A+ +G +E Sbjct: 57 ILDVACGTGFTTLCLAEANPGAKIIGVDISEESVKLARERLSYHGFNE 104 >gi|104773938|ref|YP_618918.1| ribosomal protein L11 methyltransferase [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|123251925|sp|Q1GAH2|PRMA_LACDA RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11 Mtase gi|103423019|emb|CAI97705.1| Ribosomal protein L11 methyltransferase [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|325125608|gb|ADY84938.1| Methyltransferase [Lactobacillus delbrueckii subsp. bulgaricus 2038] Length = 314 Score = 36.2 bits (82), Expect = 4.3, Method: Compositional matrix adjust. Identities = 24/74 (32%), Positives = 42/74 (56%), Gaps = 4/74 (5%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 + + D+GTG+G + +A K K V DIS +++ A+ NA NG+ + ++ Sbjct: 178 LTVADVGTGSGILAIAAHKLGA--KSVLATDISDESMTAAEENAALNGIHD-IALQKTSL 234 Query: 158 FSSVEGLFDVIVSN 171 + V+G FD+IV+N Sbjct: 235 LADVDGKFDLIVAN 248 >gi|15602953|ref|NP_246025.1| ribosomal protein L11 methyltransferase [Pasteurella multocida subsp. multocida str. Pm70] gi|38605464|sp|Q9CLW2|PRMA_PASMU RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11 Mtase gi|12721427|gb|AAK03172.1| PrmA [Pasteurella multocida subsp. multocida str. Pm70] Length = 293 Score = 36.2 bits (82), Expect = 4.3, Method: Compositional matrix adjust. Identities = 23/71 (32%), Positives = 40/71 (56%), Gaps = 2/71 (2%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 ++D G G+G + +A LK VG+DI +A+ +++NA NGV++R S+ Sbjct: 162 VIDFGCGSGILAIAALKLGAK-SAVGIDIDPQAILASRNNAEQNGVADRLQLFLSE-DKP 219 Query: 161 VEGLFDVIVSN 171 + DV+V+N Sbjct: 220 ADLKADVVVAN 230 >gi|328544944|ref|YP_004305053.1| methyltransferase type 11 [polymorphum gilvum SL003B-26A1] gi|326414686|gb|ADZ71749.1| Methyltransferase type 11 [Polymorphum gilvum SL003B-26A1] Length = 224 Score = 36.2 bits (82), Expect = 4.3, Method: Compositional matrix adjust. Identities = 19/60 (31%), Positives = 33/60 (55%) Query: 90 LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 + R++ D +L+LG GTG +A + P G+DIS + L+ A +N G+++R Sbjct: 37 IARLDPGDGDTVLELGCGTGRNLIAAARRYPRTLFYGIDISSEMLDTAAANVARAGLADR 96 >gi|325680739|ref|ZP_08160277.1| hypothetical protein CUS_7776 [Ruminococcus albus 8] gi|324107519|gb|EGC01797.1| hypothetical protein CUS_7776 [Ruminococcus albus 8] Length = 371 Score = 36.2 bits (82), Expect = 4.3, Method: Compositional matrix adjust. Identities = 23/68 (33%), Positives = 32/68 (47%), Gaps = 6/68 (8%) Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181 FK G DI A+E+++ NA GV + Q D V+ + NPPY E + Sbjct: 253 FKAFGFDIDDIAVELSRDNAKKAGVGSKITVKQQDISKFVQPEECITFCNPPYGERL--- 309 Query: 182 CLGLEVRD 189 LE+RD Sbjct: 310 ---LEIRD 314 >gi|237747592|ref|ZP_04578072.1| ubiquinone biosynthesis O-methyltransferase [Oxalobacter formigenes OXCC13] gi|229378954|gb|EEO29045.1| ubiquinone biosynthesis O-methyltransferase [Oxalobacter formigenes OXCC13] Length = 231 Score = 36.2 bits (82), Expect = 4.3, Method: Compositional matrix adjust. Identities = 23/78 (29%), Positives = 44/78 (56%), Gaps = 6/78 (7%) Query: 93 IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152 +E RDV LD+G G G + +L KE G+D++ A+E A+S+++ + +S R+ Sbjct: 45 LENRDV---LDIGCGGGILSESLAKEKAIV--TGIDLASNAIETARSHSIESNLSIRYLI 99 Query: 153 LQSDWFSSVE-GLFDVIV 169 ++ + +E +DV+ Sbjct: 100 SSAEELADMEPAKYDVVT 117 >gi|190346296|gb|EDK38346.2| hypothetical protein PGUG_02444 [Meyerozyma guilliermondii ATCC 6260] Length = 223 Score = 36.2 bits (82), Expect = 4.3, Method: Compositional matrix adjust. Identities = 43/179 (24%), Positives = 80/179 (44%), Gaps = 31/179 (17%) Query: 66 TLSSDTFEPRPETELLVD----------SALAFSLPRIEKRDVVRILDLGTGTGAVCLAL 115 TL + +EP ++ LL+D S L S+P + ++G G+G V +A Sbjct: 9 TLDLNVYEPAEDSFLLLDCLEQDQHYLKSHLNTSVPIVS--------EIGAGSGIV-IAF 59 Query: 116 LKESPFFKGVGVDI-----SCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIV 169 +K + G+ + +C+A+ +A + GV +D Q D +++ D++V Sbjct: 60 IKRHLYPWGIYIPTDVNPHACQAV-LATLKKNSGGVPSIYDVCQMDCTTAIRSQCLDLLV 118 Query: 170 SNPPYIESVIVDCLGLEVRD---FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225 NPPY+ + V + D D ++L GG DG+ + +S L +G+ + Sbjct: 119 FNPPYVPAEAVPATPNTLDDETWLD--LALLGGDDGMEVTWRVLKNLSSILAPNGIAYI 175 >gi|218780743|ref|YP_002432061.1| ribosomal protein L11 methyltransferase [Desulfatibacillum alkenivorans AK-01] gi|226710071|sp|B8FBE9|PRMA_DESAA RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11 Mtase gi|218762127|gb|ACL04593.1| ribosomal protein L11 methyltransferase [Desulfatibacillum alkenivorans AK-01] Length = 310 Score = 36.2 bits (82), Expect = 4.3, Method: Compositional matrix adjust. Identities = 47/167 (28%), Positives = 66/167 (39%), Gaps = 25/167 (14%) Query: 29 VLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEP------RPETELLV 82 LDD + LT+ V K + W+ ++ S +P PE +L+ Sbjct: 81 ALDDLKGSVLTDYSVHFSKQDDQPWETAWKAHFHPIEIGESLVIKPSWEDYENPEKRMLI 140 Query: 83 --DSALAFS----------LPRIE----KRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126 D +AF L IE K+ R LD+GTG+G + + K K G Sbjct: 141 ELDPGMAFGTGTHPTTAVCLEMIETECLKKAPERFLDVGTGSGILMIGAYKLGA-RKVFG 199 Query: 127 VDISCKALEIAKSNAVTNGVSER-FDTLQSDWFSS-VEGLFDVIVSN 171 D ALE A N N V E F D + VEG FD++ +N Sbjct: 200 CDNDMDALEAAAKNLKGNQVHEGDFGLWLGDLLAGIVEGAFDMVAAN 246 >gi|159037065|ref|YP_001536318.1| methyltransferase small [Salinispora arenicola CNS-205] gi|157915900|gb|ABV97327.1| methyltransferase small [Salinispora arenicola CNS-205] Length = 494 Score = 36.2 bits (82), Expect = 4.3, Method: Compositional matrix adjust. Identities = 30/82 (36%), Positives = 46/82 (56%), Gaps = 5/82 (6%) Query: 95 KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154 +R V LDLGTG+G L L + + D+S +AL A + A NG + ++ L+ Sbjct: 153 RRPVETALDLGTGSGVQALHLSTHA--RRVTATDLSERALRFAATAAALNG--QDWELLR 208 Query: 155 SDWFSSVEGL-FDVIVSNPPYI 175 D + V G FD++VSNPP++ Sbjct: 209 GDLTAPVAGRRFDLVVSNPPFV 230 >gi|315178394|gb|ADT85308.1| ribosomal protein L11 methyltransferase [Vibrio furnissii NCTC 11218] Length = 295 Score = 36.2 bits (82), Expect = 4.3, Method: Compositional matrix adjust. Identities = 27/73 (36%), Positives = 41/73 (56%), Gaps = 6/73 (8%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159 ++D G G+G + +A +K K +G+DI +AL +K NA NGV + + L D Sbjct: 163 VIDFGCGSGILAIAAIKLG-AAKVIGIDIDPQALLASKDNASRNGVEDLIEVYLPKD--- 218 Query: 160 SVEGLF-DVIVSN 171 EGL DV+V+N Sbjct: 219 QPEGLVADVVVAN 231 >gi|330947951|ref|XP_003307015.1| hypothetical protein PTT_20336 [Pyrenophora teres f. teres 0-1] gi|311315194|gb|EFQ84902.1| hypothetical protein PTT_20336 [Pyrenophora teres f. teres 0-1] Length = 366 Score = 36.2 bits (82), Expect = 4.3, Method: Compositional matrix adjust. Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 5/69 (7%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+LD+GTGTG + E P + +G D+S + V V D +S+W Sbjct: 132 RVLDIGTGTGIWAIDFADEHPGAEVIGTDLSP-----IQPTWVPPNVKFYIDDAESEWVY 186 Query: 160 SVEGLFDVI 168 S + FD I Sbjct: 187 SPDEAFDFI 195 >gi|291320525|ref|YP_003515789.1| type I restriction modification system modification (methylase) protein [Mycoplasma agalactiae] gi|290752860|emb|CBH40835.1| Modification (Methylase) protein of type Irestriction modification system [Mycoplasma agalactiae] Length = 892 Score = 36.2 bits (82), Expect = 4.3, Method: Composition-based stats. Identities = 35/147 (23%), Positives = 65/147 (44%), Gaps = 30/147 (20%) Query: 68 SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 + + + P +EL+ +A+ L + R+ +++ D +G+G++ L + +E + Sbjct: 210 AGEFYTPHEVSELM-SKIVAYHL---KDREFIKVYDPTSGSGSLLLTIGQEFKKYNSGNS 265 Query: 128 DISCKALEI-------AKSNAVTNGVS------ERFDTLQSDW-------FSSVEGL-FD 166 +S A E+ + N + +S DTL+ DW +SS + L D Sbjct: 266 PVSYYAQELKAEVFNLTRMNLIMKNISPTEIHARNGDTLEQDWPMFENNDYSSYQHLSVD 325 Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPR 193 +VSNPPY ++ E DPR Sbjct: 326 AVVSNPPYSQN-----WNAEKHTLDPR 347 >gi|261493016|ref|ZP_05989558.1| ribosomal protein L11 methyltransferase [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261495164|ref|ZP_05991627.1| ribosomal protein L11 methyltransferase [Mannheimia haemolytica serotype A2 str. OVINE] gi|261309140|gb|EEY10380.1| ribosomal protein L11 methyltransferase [Mannheimia haemolytica serotype A2 str. OVINE] gi|261311360|gb|EEY12521.1| ribosomal protein L11 methyltransferase [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 293 Score = 36.2 bits (82), Expect = 4.3, Method: Compositional matrix adjust. Identities = 23/72 (31%), Positives = 42/72 (58%), Gaps = 4/72 (5%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159 ++D G G+G + +A LK + +G+DI +A+ +++NA NGV+E+ L D Sbjct: 162 VIDFGCGSGILAIAALKLGAK-QAIGIDIDPQAILASQNNAEANGVAEKLQLFLAKDQPR 220 Query: 160 SVEGLFDVIVSN 171 ++ DV+V+N Sbjct: 221 ELQA--DVVVAN 230 >gi|226311619|ref|YP_002771513.1| ribosomal protein L11 methyltransferase [Brevibacillus brevis NBRC 100599] gi|254782831|sp|C0ZB50|PRMA_BREBN RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11 Mtase gi|226094567|dbj|BAH43009.1| ribosomal protein L11 methyltransferase [Brevibacillus brevis NBRC 100599] Length = 313 Score = 36.2 bits (82), Expect = 4.3, Method: Compositional matrix adjust. Identities = 34/138 (24%), Positives = 64/138 (46%), Gaps = 24/138 (17%) Query: 56 GWRDFYNV-----RLTLSS--DTFEPRPETELLV--DSALAFS----------LPRIEKR 96 W+ +Y R+T+ + + P+ E+++ D +AF L +EK Sbjct: 114 AWKKYYKPVHVSDRMTIKPVWEEYVPKHPDEIIIEMDPGMAFGTGTHPTTILCLRALEKY 173 Query: 97 DVV--RILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTL 153 ++ D+GTGT + +A +K K V +D+ A+ A++N NGV E + Sbjct: 174 MAKGDQVYDVGTGTAILSIAAIKLGA--KDVLAMDLDEVAVRSAQANTELNGVHEHINVR 231 Query: 154 QSDWFSSVEGLFDVIVSN 171 Q++ +E +V+V+N Sbjct: 232 QNNLLDGIEEQVEVVVAN 249 >gi|170782229|ref|YP_001710562.1| putative methyltransferase [Clavibacter michiganensis subsp. sepedonicus] gi|169156798|emb|CAQ01962.1| putative methyltransferase [Clavibacter michiganensis subsp. sepedonicus] Length = 284 Score = 36.2 bits (82), Expect = 4.3, Method: Compositional matrix adjust. Identities = 19/56 (33%), Positives = 31/56 (55%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 ++DLG GTG +AL + + VD S L+ AV +G+++R T+Q+D Sbjct: 48 VVDLGAGTGTGTVALARSFGRAEVHAVDASAAMLDRVAERAVVDGLADRIRTVQAD 103 >gi|148377828|ref|YP_001256704.1| modification (methylase) protein of type irestriction-modification system [Mycoplasma agalactiae PG2] gi|148291874|emb|CAL59265.1| Modification (Methylase) protein of type Irestriction modification system [Mycoplasma agalactiae PG2] Length = 892 Score = 36.2 bits (82), Expect = 4.3, Method: Composition-based stats. Identities = 35/147 (23%), Positives = 65/147 (44%), Gaps = 30/147 (20%) Query: 68 SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 + + + P +EL+ +A+ L + R+ +++ D +G+G++ L + +E + Sbjct: 210 AGEFYTPHEVSELM-SKIVAYHL---KDREFIKVYDPTSGSGSLLLTIGQEFKKYNSGNS 265 Query: 128 DISCKALEI-------AKSNAVTNGVS------ERFDTLQSDW-------FSSVEGL-FD 166 +S A E+ + N + +S DTL+ DW +SS + L D Sbjct: 266 PVSYYAQELKAEVFNLTRMNLIMKNISPTEIHARNGDTLEQDWPMFENNDYSSYQHLSVD 325 Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPR 193 +VSNPPY ++ E DPR Sbjct: 326 AVVSNPPYSQN-----WNAEKHTLDPR 347 >gi|269121536|ref|YP_003309713.1| methyltransferase small [Sebaldella termitidis ATCC 33386] gi|268615414|gb|ACZ09782.1| methyltransferase small [Sebaldella termitidis ATCC 33386] Length = 222 Score = 36.2 bits (82), Expect = 4.4, Method: Compositional matrix adjust. Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 6/77 (7%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER---FDTLQSDW 157 +LD+G G G + L LL + + V+I + + + N N +S++ + T +D+ Sbjct: 49 LLDIGAGNGILPL-LLCNANLTEISAVEIQKNSFDCLEKNIDLNSLSDKIIPYHTDINDF 107 Query: 158 FSSVEGLFDVIVSNPPY 174 F E FD I+SNPPY Sbjct: 108 FPDFE--FDYIISNPPY 122 >gi|1303810|dbj|BAA12466.1| YqeT [Bacillus subtilis] gi|1890059|dbj|BAA12078.1| YqeT [Bacillus subtilis] Length = 311 Score = 36.2 bits (82), Expect = 4.4, Method: Compositional matrix adjust. Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 5/74 (6%) Query: 100 RILDLGTGTG--AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 +++D+GTG+G ++ A+L+ D+ A+E A+ N N VS+ Q++ Sbjct: 178 KVIDVGTGSGILSIAAAMLEAESVH---AYDLDPVAVESARLNLKLNKVSDIAQVKQNNL 234 Query: 158 FSSVEGLFDVIVSN 171 +EG DVIV+N Sbjct: 235 LDGIEGEHDVIVAN 248 >gi|257051330|ref|YP_003129163.1| methyltransferase [Halorhabdus utahensis DSM 12940] gi|256690093|gb|ACV10430.1| methyltransferase [Halorhabdus utahensis DSM 12940] Length = 326 Score = 36.2 bits (82), Expect = 4.4, Method: Compositional matrix adjust. Identities = 31/108 (28%), Positives = 50/108 (46%), Gaps = 14/108 (12%) Query: 79 ELLVDSALAFSLPRI--EKRDVV-------RILDLGTGTGAVCLALLKESPFFKGVGVDI 129 E ++D A + PR+ E+ VV + D+ G G + + KE VGVD+ Sbjct: 147 EFVLDLAAVYFSPRLATERHRVVEQVGAGEQAFDMFAGVGPFVIPMAKEG--ATCVGVDV 204 Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG---LFDVIVSNPPY 174 + A+E + NA N V++R ++ D +V D IV N P+ Sbjct: 205 NPDAIEYLRENARRNDVADRITAIEGDVRETVPAHADWADRIVMNLPH 252 >gi|121712078|ref|XP_001273654.1| UbiE/COQ5 family methyltransferase, putative [Aspergillus clavatus NRRL 1] gi|119401806|gb|EAW12228.1| UbiE/COQ5 family methyltransferase, putative [Aspergillus clavatus NRRL 1] Length = 276 Score = 36.2 bits (82), Expect = 4.4, Method: Compositional matrix adjust. Identities = 28/89 (31%), Positives = 42/89 (47%), Gaps = 10/89 (11%) Query: 96 RDVVRILDLGTGTGA-VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154 R+ ++DLG+G G V LA K P K +GVD++ K L +A+ N G+S Sbjct: 67 REGETVVDLGSGGGIDVILAARKVGPKGKAIGVDMTEKMLTLARENVEKAGISNA----- 121 Query: 155 SDWFSSVEGLFDVIVSNPPYIESVIVDCL 183 S VEG I + +I +C+ Sbjct: 122 ----SFVEGFITAIPLEDSTADCIISNCV 146 >gi|315179199|gb|ADT86113.1| 16S RNA G1207 methylase RsmC [Vibrio furnissii NCTC 11218] Length = 340 Score = 36.2 bits (82), Expect = 4.4, Method: Compositional matrix adjust. Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 2/75 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LD G G G + + P DIS A+ ++ NG+S R SD +S Sbjct: 203 KVLDFGCGAGVLGGVMAMLYPNIALEMCDISALAIRSSQETLAANGLSGR--VFASDVYS 260 Query: 160 SVEGLFDVIVSNPPY 174 + IV+NPP+ Sbjct: 261 DTASDYQFIVTNPPF 275 >gi|309803859|ref|ZP_07697944.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Lactobacillus iners LactinV 11V1-d] gi|308164093|gb|EFO66355.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Lactobacillus iners LactinV 11V1-d] Length = 450 Score = 36.2 bits (82), Expect = 4.4, Method: Compositional matrix adjust. Identities = 32/95 (33%), Positives = 49/95 (51%), Gaps = 13/95 (13%) Query: 86 LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145 LA ++ DVV +D +G G + L++ K K +GV+I A++ AK NA+ NG Sbjct: 291 LAIQKAQLTADDVV--IDAYSGIGTIGLSVAKHVK--KVLGVEIVRDAVKDAKKNAILNG 346 Query: 146 VSE------RFDTLQSDWFSSVEGL-FDVIVSNPP 173 V+ + + L W + EGL DVI +PP Sbjct: 347 VNNAEYFEGKAEELMPQWAN--EGLKTDVIFVDPP 379 >gi|237809272|ref|YP_002893712.1| 50S ribosomal protein L11 methyltransferase [Tolumonas auensis DSM 9187] gi|259534600|sp|C4LAF1|PRMA_TOLAT RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11 Mtase gi|237501533|gb|ACQ94126.1| ribosomal protein L11 methyltransferase [Tolumonas auensis DSM 9187] Length = 292 Score = 36.2 bits (82), Expect = 4.4, Method: Compositional matrix adjust. Identities = 23/72 (31%), Positives = 43/72 (59%), Gaps = 4/72 (5%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159 ++D G G+G + +A LK + +G+DI +A+E ++ NA NGVS++ + L D Sbjct: 160 LVDFGCGSGILAIAALKLG-AERVIGIDIDPQAIEASRDNAQRNGVSDQLELYLPEDQPK 218 Query: 160 SVEGLFDVIVSN 171 + + D++V+N Sbjct: 219 NFQA--DIVVAN 228 >gi|220912236|ref|YP_002487545.1| methyltransferase small [Arthrobacter chlorophenolicus A6] gi|219859114|gb|ACL39456.1| methyltransferase small [Arthrobacter chlorophenolicus A6] Length = 207 Score = 36.2 bits (82), Expect = 4.4, Method: Compositional matrix adjust. Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 2/73 (2%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LD+G G G + L + ++P + VD++ + + + NA G+S + + Sbjct: 63 LLDIGCGWGPIALTMALKAPHAQVYAVDVNERCIALTNGNAAALGLSNVAASTPDAVDPA 122 Query: 161 VEGLFDVIVSNPP 173 V+ FD I SNPP Sbjct: 123 VQ--FDTIWSNPP 133 >gi|170724872|ref|YP_001758898.1| ribosomal protein L11 methyltransferase [Shewanella woodyi ATCC 51908] gi|226710114|sp|B1KQE8|PRMA_SHEWM RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11 Mtase gi|169810219|gb|ACA84803.1| ribosomal protein L11 methyltransferase [Shewanella woodyi ATCC 51908] Length = 293 Score = 36.2 bits (82), Expect = 4.4, Method: Compositional matrix adjust. Identities = 19/54 (35%), Positives = 32/54 (59%), Gaps = 1/54 (1%) Query: 97 DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150 D ++D G G+G + +A LK K G+DI +A++ +K+NA NGV ++ Sbjct: 158 DNKEVIDFGCGSGILAVAALKLGAT-KVTGIDIDYQAIDASKANAERNGVEDQL 210 >gi|110635331|ref|YP_675539.1| 3-demethylubiquinone-9 3-methyltransferase [Mesorhizobium sp. BNC1] gi|123353220|sp|Q11E01|UBIG_MESSB RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName: Full=3,4-dihydroxy-5-hexaprenylbenzoate methyltransferase; Short=DHHB methyltransferase gi|110286315|gb|ABG64374.1| 3-demethylubiquinone-9 3-methyltransferase [Chelativorans sp. BNC1] Length = 253 Score = 36.2 bits (82), Expect = 4.4, Method: Compositional matrix adjust. Identities = 24/81 (29%), Positives = 43/81 (53%), Gaps = 3/81 (3%) Query: 91 PRIEKR-DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 PR K + +RILD+G G G +C + + VG D S +E+A+ +A+ +GVS Sbjct: 57 PRAAKPFEGLRILDIGCGGGLLCEPMARLGASV--VGADASATNIEVARLHALESGVSID 114 Query: 150 FDTLQSDWFSSVEGLFDVIVS 170 + ++ + FD+I++ Sbjct: 115 YRAETAEALADQGEKFDIILN 135 >gi|213965465|ref|ZP_03393660.1| putative transferase [Corynebacterium amycolatum SK46] gi|213951849|gb|EEB63236.1| putative transferase [Corynebacterium amycolatum SK46] Length = 227 Score = 36.2 bits (82), Expect = 4.5, Method: Compositional matrix adjust. Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 2/55 (3%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKG--VGVDISCKALEIAKSNAVTNGVSERFD 151 R+LDLG GTG + L E + + VG D+S A+ IA+ A G+ R + Sbjct: 55 ARVLDLGCGTGWLARMLAAEPRYRRANIVGYDLSPNAIRIARERAAVEGLGARTE 109 >gi|189188670|ref|XP_001930674.1| methyltransferase [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187972280|gb|EDU39779.1| methyltransferase [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 370 Score = 36.2 bits (82), Expect = 4.5, Method: Compositional matrix adjust. Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 5/69 (7%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+LD+GTGTG + E P + +G D+S + V V D +S+W Sbjct: 136 RVLDIGTGTGIWAIDFADEHPGAEVIGTDLSP-----IQPTWVPPNVKFYIDDAESEWVY 190 Query: 160 SVEGLFDVI 168 S + FD I Sbjct: 191 SPDEAFDFI 199 >gi|168703411|ref|ZP_02735688.1| hypothetical protein GobsU_28016 [Gemmata obscuriglobus UQM 2246] Length = 249 Score = 36.2 bits (82), Expect = 4.5, Method: Compositional matrix adjust. Identities = 19/44 (43%), Positives = 29/44 (65%), Gaps = 2/44 (4%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143 R+LDLG GTG +C+ ++ F VGVD+S + L A++NA + Sbjct: 54 RLLDLGCGTGRLCVHFARKG--FDCVGVDLSEEMLAKARANAAS 95 >gi|115472299|ref|NP_001059748.1| Os07g0509600 [Oryza sativa Japonica Group] gi|113611284|dbj|BAF21662.1| Os07g0509600 [Oryza sativa Japonica Group] Length = 347 Score = 36.2 bits (82), Expect = 4.5, Method: Compositional matrix adjust. Identities = 21/74 (28%), Positives = 40/74 (54%), Gaps = 1/74 (1%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +L++G GTG + + LL ESP + V+I + ++ + G++ + +++D + Sbjct: 56 VLEVGPGTGNLTVRLL-ESPAARVSAVEIDPRMVDAVTARVDALGLAHKLTVIRADAVEA 114 Query: 161 VEGLFDVIVSNPPY 174 FDV V+N PY Sbjct: 115 EFPEFDVCVANIPY 128 >gi|292655627|ref|YP_003535524.1| putative DNA methylase [Haloferax volcanii DS2] gi|291370592|gb|ADE02819.1| predicted DNA methylase [Haloferax volcanii DS2] Length = 208 Score = 36.2 bits (82), Expect = 4.5, Method: Compositional matrix adjust. Identities = 27/78 (34%), Positives = 39/78 (50%), Gaps = 5/78 (6%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LDLG+GTG + L SP + VGV++ AL A NA G S D +++D Sbjct: 52 VLDLGSGTGMLGLGAALRSP-ARVVGVELDDDALATATDNARRVGASAPIDWIRADATRL 110 Query: 161 VEGLFD----VIVSNPPY 174 L D ++ NPP+ Sbjct: 111 PLCLPDDRQVTVLMNPPF 128 >gi|226355221|ref|YP_002784961.1| N6-adenine-specific DNA methylase; RNA methylase [Deinococcus deserti VCD115] gi|226317211|gb|ACO45207.1| putative N6-adenine-specific DNA methylase; putative RNA methylase [Deinococcus deserti VCD115] Length = 364 Score = 36.2 bits (82), Expect = 4.5, Method: Compositional matrix adjust. Identities = 23/98 (23%), Positives = 53/98 (54%), Gaps = 1/98 (1%) Query: 82 VDSALAFSLPRIE-KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140 +++++A++ ++ +RD+ RI + +G+G + + P+ VGVDI KA+E ++SN Sbjct: 197 LNASIAYATHKLAGQRDIDRIFNPMSGSGTLLVERALMGPYDALVGVDIDPKAVECSRSN 256 Query: 141 AVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESV 178 G + + FD++V++ P+ +++ Sbjct: 257 LKAAGREVEVAMVDALHTGLPARSFDLVVADLPWGDAI 294 >gi|220912882|ref|YP_002488191.1| methyltransferase small [Arthrobacter chlorophenolicus A6] gi|219859760|gb|ACL40102.1| methyltransferase small [Arthrobacter chlorophenolicus A6] Length = 418 Score = 36.2 bits (82), Expect = 4.5, Method: Compositional matrix adjust. Identities = 29/100 (29%), Positives = 49/100 (49%), Gaps = 2/100 (2%) Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 +DLG GTG + + P K D S A+ A + A NG+ R LQ D S++ Sbjct: 276 VDLGCGTGILAAMYARTYPEAKVTATDQSAAAVASALATARANGLDGRISALQDDALSTM 335 Query: 162 -EGLFDVIVSNPPY-IESVIVDCLGLEVRDFDPRISLDGG 199 + D+++ NPP+ + + + GL++ + R+ GG Sbjct: 336 ADASADLVLLNPPFHVGAGVHAGAGLKLIEAAGRVLAPGG 375 >gi|194334774|ref|YP_002016634.1| Mg-protoporphyrin IX methyl transferase [Prosthecochloris aestuarii DSM 271] gi|194312592|gb|ACF46987.1| magnesium protoporphyrin O-methyltransferase [Prosthecochloris aestuarii DSM 271] Length = 233 Score = 36.2 bits (82), Expect = 4.5, Method: Compositional matrix adjust. Identities = 33/117 (28%), Positives = 56/117 (47%), Gaps = 13/117 (11%) Query: 57 WRDFY-NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR---ILDLGTGTGAVC 112 W Y N +L+ T R +++D A A+ IEK ++ + ILD G GTG Sbjct: 28 WASIYGNDKLSTVRSTV--RQGHAVMMDEAFAW----IEKLNLPKGATILDAGCGTGLFS 81 Query: 113 LALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIV 169 + L + ++ VDI+ + + AK +A GV+ D + + V+G +D +V Sbjct: 82 IRLAENG--YRVKAVDIASQMVGKAKEDATAKGVANMID-FEVNTIEEVKGQYDAVV 135 >gi|223937904|ref|ZP_03629804.1| Methyltransferase type 11 [bacterium Ellin514] gi|223893510|gb|EEF59971.1| Methyltransferase type 11 [bacterium Ellin514] Length = 389 Score = 36.2 bits (82), Expect = 4.5, Method: Compositional matrix adjust. Identities = 21/51 (41%), Positives = 32/51 (62%), Gaps = 3/51 (5%) Query: 101 ILDLGTGTGAVC-LALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150 +LDLG+GTG +C +A P + +GVD++ LE+A+ NA V+ER Sbjct: 66 VLDLGSGTGKICFIAAQVVGPQGRVIGVDMTDDMLEVARRNAPV--VAERL 114 >gi|307102795|gb|EFN51062.1| hypothetical protein CHLNCDRAFT_59324 [Chlorella variabilis] Length = 372 Score = 36.2 bits (82), Expect = 4.6, Method: Compositional matrix adjust. Identities = 38/125 (30%), Positives = 59/125 (47%), Gaps = 17/125 (13%) Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAV--CLALLKESPF 121 + T + +EP ++ LVD ALA ++ L++G+G+G V LALL Sbjct: 7 KTTFHREVYEPAEDSFALVD-ALAAHREAWRQQPPRMCLEVGSGSGYVITSLALL----- 60 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVS------ERFDTLQSDWFSS---VEGLFDVIVSNP 172 + +GV A +I + A + R D + D S+ VEGL DV+V NP Sbjct: 61 LQQLGVAAQLLATDINQQAAAATAATLAAHQVRRADIVVCDLASALPPVEGLVDVLVFNP 120 Query: 173 PYIES 177 PY+ + Sbjct: 121 PYVPT 125 >gi|227523212|ref|ZP_03953261.1| methyltransferase family protein [Lactobacillus hilgardii ATCC 8290] gi|227089599|gb|EEI24911.1| methyltransferase family protein [Lactobacillus hilgardii ATCC 8290] Length = 241 Score = 36.2 bits (82), Expect = 4.6, Method: Compositional matrix adjust. Identities = 27/74 (36%), Positives = 38/74 (51%), Gaps = 7/74 (9%) Query: 90 LPRIEKRDVVRILDLGTGTGAVCLALLK-ESPFFKGVGVDI------SCKALEIAKSNAV 142 L + + D +LDLG G GAV +AL K PF K VGVD+ S +LE K N Sbjct: 71 LAKTDISDDATVLDLGCGHGAVLIALSKLLGPFGKAVGVDLWKNADKSHNSLEETKRNLE 130 Query: 143 TNGVSERFDTLQSD 156 V++ + + +D Sbjct: 131 IAKVADHTELVTAD 144 >gi|149918120|ref|ZP_01906613.1| modification methylase HemK [Plesiocystis pacifica SIR-1] gi|149821125|gb|EDM80531.1| modification methylase HemK [Plesiocystis pacifica SIR-1] Length = 259 Score = 36.2 bits (82), Expect = 4.6, Method: Compositional matrix adjust. Identities = 26/79 (32%), Positives = 47/79 (59%), Gaps = 4/79 (5%) Query: 99 VRILDLGTGTGAV-CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 +R+LD+G G+GAV +A L+ + D+S A+ A++N +G+ +R + SD Sbjct: 84 LRVLDMGCGSGAVGVIAALRGAASVH--LADLSPDAVANARANVRRHGLEDRCEVRCSDL 141 Query: 158 FSSV-EGLFDVIVSNPPYI 175 F++ + FD+IV N P++ Sbjct: 142 FAAFSDERFDLIVFNVPFL 160 >gi|146308680|ref|YP_001189145.1| 16S rRNA m(2)G 1207 methyltransferase [Pseudomonas mendocina ymp] gi|226712964|sp|A4XYJ7|RSMC_PSEMY RecName: Full=Ribosomal RNA small subunit methyltransferase C; AltName: Full=16S rRNA m2G1207 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rsmC gi|145576881|gb|ABP86413.1| 16S rRNA m(2)G 1207 methyltransferase [Pseudomonas mendocina ymp] Length = 331 Score = 36.2 bits (82), Expect = 4.6, Method: Compositional matrix adjust. Identities = 25/97 (25%), Positives = 41/97 (42%), Gaps = 2/97 (2%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 +D A L ++ +LD G G G + AL + P + +D+ AL ++ Sbjct: 176 LDRGSALLLEHLDSLPQGHLLDFGCGAGVIGAALKRRYPSSRVSLLDVDAFALASSRLTL 235 Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESV 178 NG+ + + S G IVSNPP+ + V Sbjct: 236 ARNGLEA--ELIAGTGIESAPGELAAIVSNPPFHQGV 270 >gi|332531630|ref|ZP_08407527.1| cyclopropane-fatty-acyl-phospholipid synthase [Hylemonella gracilis ATCC 19624] gi|332038993|gb|EGI75422.1| cyclopropane-fatty-acyl-phospholipid synthase [Hylemonella gracilis ATCC 19624] Length = 410 Score = 36.2 bits (82), Expect = 4.6, Method: Compositional matrix adjust. Identities = 31/115 (26%), Positives = 54/115 (46%), Gaps = 3/115 (2%) Query: 57 WRDFYNVRLTLSSDTFEPRPET-ELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL 115 ++ + + R+ S FE ET E + L +++ R R+LD+G G GA+ + Sbjct: 136 YQTWLDPRMVYSCAYFENGDETLEEAQLKKIDHILNKVQVRPGHRLLDIGCGWGALVIRA 195 Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170 ++ + VGV +S ++A G+ E+ + D + VEG FD I S Sbjct: 196 AQKYG-ARCVGVTLSQNQFDLATERVKAAGLQEQIEIRLQD-YRDVEGQFDRITS 248 >gi|312870826|ref|ZP_07730932.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Lactobacillus iners LEAF 3008A-a] gi|312873060|ref|ZP_07733119.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Lactobacillus iners LEAF 2062A-h1] gi|311091293|gb|EFQ49678.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Lactobacillus iners LEAF 2062A-h1] gi|311093702|gb|EFQ52040.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Lactobacillus iners LEAF 3008A-a] Length = 450 Score = 36.2 bits (82), Expect = 4.6, Method: Compositional matrix adjust. Identities = 32/95 (33%), Positives = 49/95 (51%), Gaps = 13/95 (13%) Query: 86 LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145 LA ++ DVV +D +G G + L++ K K +GV+I A++ AK NA+ NG Sbjct: 291 LAIQKAQLTADDVV--IDAYSGIGTIGLSVAKHVK--KVLGVEIVRDAVKDAKKNAILNG 346 Query: 146 VSE------RFDTLQSDWFSSVEGL-FDVIVSNPP 173 V+ + + L W + EGL DVI +PP Sbjct: 347 VNNAEYFEGKAEELMPQWAN--EGLKTDVIFVDPP 379 >gi|296876846|ref|ZP_06900894.1| methyltransferase [Streptococcus parasanguinis ATCC 15912] gi|296432348|gb|EFH18147.1| methyltransferase [Streptococcus parasanguinis ATCC 15912] Length = 248 Score = 36.2 bits (82), Expect = 4.6, Method: Compositional matrix adjust. Identities = 27/99 (27%), Positives = 48/99 (48%), Gaps = 7/99 (7%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 VDS L P++ KR + I+DL G GAV L + + +GV+I + ++A + Sbjct: 33 VDSVLLSRFPKLPKRGL--IVDLCAGNGAVGLFASTRTE-AQIIGVEIQERLADMATRSI 89 Query: 142 VTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPYIE 176 N ++ + + D + + D+I+ NPPY + Sbjct: 90 ALNDLNRQMSMITDDLKHLPQHIKGSKVDIILCNPPYFK 128 >gi|288817382|ref|YP_003431729.1| SAM dependent methyl transferase [Hydrogenobacter thermophilus TK-6] gi|288786781|dbj|BAI68528.1| SAM dependent methyl transferase [Hydrogenobacter thermophilus TK-6] gi|308750989|gb|ADO44472.1| Methyltransferase type 11 [Hydrogenobacter thermophilus TK-6] Length = 391 Score = 36.2 bits (82), Expect = 4.6, Method: Compositional matrix adjust. Identities = 31/103 (30%), Positives = 50/103 (48%), Gaps = 8/103 (7%) Query: 77 ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136 +T +D A S+ R + R LDL TG L + K + + VDIS +ALE+ Sbjct: 197 KTGFYLDQRKARSMIRQLVKPGYRCLDLFCHTGGFALNMRKAGAG-EVLAVDISAQALEV 255 Query: 137 AKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPP 173 AK NA N + + ++ + F + L FD+++ +PP Sbjct: 256 AKRNAELNSL-DNIVWMEENAFDFMRKLHKEGQVFDLVLMDPP 297 >gi|257792982|ref|YP_003186381.1| Methyltransferase type 11 [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257479674|gb|ACV59992.1| Methyltransferase type 11 [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 270 Score = 36.2 bits (82), Expect = 4.6, Method: Compositional matrix adjust. Identities = 32/124 (25%), Positives = 58/124 (46%), Gaps = 19/124 (15%) Query: 58 RDFYNV------RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAV 111 +DFY+ S+D F P TE +++ +++ + RILD+G G G Sbjct: 25 KDFYDTVAVGSGPYPASTDRFSPAAPTEKILEY--------VKRTNCRRILDVGCGMGTT 76 Query: 112 CLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSER----FDTLQSDWFSSVEGLFD 166 L + +E + +GVD S K +E A++++++ R F ++ +EG FD Sbjct: 77 LLRMAQEHVSGVQFIGVDFSEKMIERARTSSLSLHDDLRKKIGFFVANAESLPYMEGQFD 136 Query: 167 VIVS 170 + S Sbjct: 137 FVFS 140 >gi|94496889|ref|ZP_01303463.1| ribosomal protein L11 methylase [Sphingomonas sp. SKA58] gi|94423565|gb|EAT08592.1| ribosomal protein L11 methylase [Sphingomonas sp. SKA58] Length = 333 Score = 36.2 bits (82), Expect = 4.6, Method: Compositional matrix adjust. Identities = 19/46 (41%), Positives = 25/46 (54%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146 + D+GTGTG + A L P + DI A+EI+ NA NGV Sbjct: 165 VADIGTGTGLLAFAALNLWPRAHAIASDIDPVAVEISADNARANGV 210 >gi|55821542|ref|YP_139984.1| hypothetical protein stu1566 [Streptococcus thermophilus LMG 18311] gi|55823470|ref|YP_141911.1| hypothetical protein str1566 [Streptococcus thermophilus CNRZ1066] gi|55737527|gb|AAV61169.1| conserved hypothetical protein [Streptococcus thermophilus LMG 18311] gi|55739455|gb|AAV63096.1| conserved hypothetical protein [Streptococcus thermophilus CNRZ1066] Length = 254 Score = 36.2 bits (82), Expect = 4.6, Method: Compositional matrix adjust. Identities = 27/103 (26%), Positives = 52/103 (50%), Gaps = 11/103 (10%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCL--ALLKESPFFKGVGVDISCKALEIAKS 139 +DS L P+I K+ + I+DL +G GAV L + E+P + V++ + ++AK Sbjct: 33 IDSVLLSRFPKIPKKGL--IVDLCSGNGAVGLFASTRTEAPI---ILVELQERLADMAKR 87 Query: 140 NAVTNGVSERFDTLQSDWFS----SVEGLFDVIVSNPPYIESV 178 + N + ++ + D + + D+I+ NPPY ++ Sbjct: 88 SVTLNQLEDQVTVVNDDLKNLLDHAPRSQVDLILCNPPYFKAT 130 >gi|330469018|ref|YP_004406761.1| N-6 DNA methylase [Verrucosispora maris AB-18-032] gi|328811989|gb|AEB46161.1| N-6 DNA methylase [Verrucosispora maris AB-18-032] Length = 581 Score = 36.2 bits (82), Expect = 4.6, Method: Compositional matrix adjust. Identities = 40/131 (30%), Positives = 54/131 (41%), Gaps = 19/131 (14%) Query: 58 RDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRIL-DLGTGTGAVCLALL 116 R F S D + PR LLVD A + + D+VR L D GTG + LAL Sbjct: 158 RKFNEAANETSGDHYTPRDAIRLLVDLLFAERDAELTEADIVRSLYDPTAGTGGM-LALA 216 Query: 117 KESPFFKGVGVDIS-------------CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG 163 +E + G + CK+ +AK + TN +TL F + Sbjct: 217 EEHLLAQNPGAKLRLYGQEYNPQSYAICKSDLLAKGHDTTNIAFG--NTLTDPAFKDRK- 273 Query: 164 LFDVIVSNPPY 174 FD +SNPPY Sbjct: 274 -FDFCMSNPPY 283 >gi|326509621|dbj|BAJ87026.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 236 Score = 36.2 bits (82), Expect = 4.6, Method: Compositional matrix adjust. Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 9/85 (10%) Query: 57 WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116 W+D + + PRPETE +VD A +E DLGTG+GA+ +A+ Sbjct: 153 WKDLV---VAVRDGVLIPRPETEAVVDMVGA-----VEGFQDGWWADLGTGSGAIAVAVA 204 Query: 117 KE-SPFFKGVGVDISCKALEIAKSN 140 + P + D+S A+E+A+ N Sbjct: 205 RMLGPAGRVFATDVSEVAVEVARLN 229 >gi|269119307|ref|YP_003307484.1| methyltransferase type 11 [Sebaldella termitidis ATCC 33386] gi|268613185|gb|ACZ07553.1| Methyltransferase type 11 [Sebaldella termitidis ATCC 33386] Length = 243 Score = 36.2 bits (82), Expect = 4.6, Method: Compositional matrix adjust. Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 9/90 (10%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 ILD+G G+G + L K + +G+DIS K L A+ ++N + R+ L + S Sbjct: 45 ILDIGCGSGDLSSILAKTANSV--LGIDISQKMLNTAREKNISNNI--RYQELSMENIDS 100 Query: 161 VEGLFDVIVSNPPY-----IESVIVDCLGL 185 + FD+ VS+ + E +I+D L Sbjct: 101 LSEKFDIAVSSLAFHYVENFEKLILDISKL 130 >gi|193662159|ref|XP_001950779.1| PREDICTED: trimethylguanosine synthase-like [Acyrthosiphon pisum] Length = 248 Score = 36.2 bits (82), Expect = 4.6, Method: Compositional matrix adjust. Identities = 21/71 (29%), Positives = 39/71 (54%), Gaps = 5/71 (7%) Query: 105 GTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL 164 G G+ ++ AL + K + +DI +E+A++NA GVS+R + + D+++ L Sbjct: 96 GAGSNSIQFALTSK----KVIAIDIDPIKIELARNNAKVYGVSDRIEFIIGDYYALAPTL 151 Query: 165 -FDVIVSNPPY 174 DV+ PP+ Sbjct: 152 KADVVFLAPPW 162 >gi|332993180|gb|AEF03235.1| 3-demethylubiquinone-9 3-methyltransferase [Alteromonas sp. SN2] Length = 234 Score = 36.2 bits (82), Expect = 4.7, Method: Compositional matrix adjust. Identities = 25/92 (27%), Positives = 51/92 (55%), Gaps = 8/92 (8%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 +++D+G G G + ++ K + VG+D++ +LEIAK + + +G++ + + ++ F+ Sbjct: 51 KVVDIGCGGGILAESMAKAGA--EVVGLDMASASLEIAKLHGLESGINVDYHCVTAESFA 108 Query: 160 -SVEGLFDVI-----VSNPPYIESVIVDCLGL 185 S G FDV+ + + P SV+ C L Sbjct: 109 DSHAGEFDVVTCMEMLEHVPDPASVVRSCAKL 140 >gi|296284180|ref|ZP_06862178.1| SAM-dependent methyltransferase [Citromicrobium bathyomarinum JL354] Length = 235 Score = 36.2 bits (82), Expect = 4.7, Method: Compositional matrix adjust. Identities = 25/72 (34%), Positives = 34/72 (47%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 R+L +G GTGA AL E VGVD S + LEIA+ G+ R + + Sbjct: 50 ARVLCVGVGTGADIFALASERADLTFVGVDPSAQMLEIARHRLDEAGIGARCELVHGYVD 109 Query: 159 SSVEGLFDVIVS 170 + E F +VS Sbjct: 110 AVAERDFAAVVS 121 >gi|296133941|ref|YP_003641188.1| ribosomal protein L11 methyltransferase [Thermincola sp. JR] gi|296032519|gb|ADG83287.1| ribosomal protein L11 methyltransferase [Thermincola potens JR] Length = 311 Score = 36.2 bits (82), Expect = 4.7, Method: Compositional matrix adjust. Identities = 22/76 (28%), Positives = 40/76 (52%), Gaps = 2/76 (2%) Query: 96 RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155 R+ ++ D+GTG+G LA+ + V +DI A+ +A+ NA NGV+ + + Sbjct: 173 REGHKVYDVGTGSG--ILAITGAKLGAEVVSIDIDEVAVRVARENAALNGVAAKVEVKLG 230 Query: 156 DWFSSVEGLFDVIVSN 171 D + D++V+N Sbjct: 231 DLLAGETEPADIVVAN 246 >gi|219130619|ref|XP_002185459.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217403173|gb|EEC43128.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 647 Score = 36.2 bits (82), Expect = 4.7, Method: Compositional matrix adjust. Identities = 28/104 (26%), Positives = 45/104 (43%), Gaps = 29/104 (27%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LDL TG+G LA L + V VD++ +AL++ + NA+ N + + + D S Sbjct: 293 LLDLCTGSGVQALAALTMEKANQAVCVDLNPRALQMTRLNAILNDLDTKVQCVLGDLTSD 352 Query: 161 V-------EGL----------------------FDVIVSNPPYI 175 V EG FD+I +NPP++ Sbjct: 353 VGRIYTNSEGSHDLAIDDKAQPLLDVLRRISPRFDLITANPPFL 396 >gi|14591077|ref|NP_143152.1| hypothetical protein PH1259 [Pyrococcus horikoshii OT3] gi|50401322|sp|O58994|Y1259_PYRHO RecName: Full=Uncharacterized RNA methyltransferase PH1259 gi|3257678|dbj|BAA30361.1| 412aa long hypothetical protein [Pyrococcus horikoshii OT3] Length = 412 Score = 36.2 bits (82), Expect = 4.7, Method: Compositional matrix adjust. Identities = 26/90 (28%), Positives = 52/90 (57%), Gaps = 5/90 (5%) Query: 85 ALAFSLPRIEKR-DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143 AL L +EK + ++LDL +G G + L L K F+ GV+++ ++E+AK +A Sbjct: 260 ALPLLLKSVEKFCEGSKVLDLYSGIGTLSLYLAKRG--FEVTGVEVNGTSVEMAKRSAEI 317 Query: 144 NGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173 N ++ F +++ + +EG ++ ++ +PP Sbjct: 318 NSINATFIQGKAE-DAELEG-YETLIVDPP 345 >gi|300727266|ref|ZP_07060682.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Prevotella bryantii B14] gi|299775504|gb|EFI72098.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Prevotella bryantii B14] Length = 484 Score = 36.2 bits (82), Expect = 4.7, Method: Compositional matrix adjust. Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 10/80 (12%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF-------DTL 153 + DL TGTG + + S K +G++ +A+E AK N+ NG+ D L Sbjct: 341 VYDLYTGTGTIANFVAHHSK--KVIGIEYVPEAIEDAKVNSEINGIDNTLFYAGDMKDIL 398 Query: 154 QSDWFSSVEGLFDVIVSNPP 173 D F G DVI+++PP Sbjct: 399 TDD-FIKQHGRPDVIITDPP 417 >gi|291531850|emb|CBK97435.1| Predicted O-methyltransferase [Eubacterium siraeum 70/3] Length = 245 Score = 36.2 bits (82), Expect = 4.7, Method: Compositional matrix adjust. Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 8/82 (9%) Query: 100 RILDLGTGTGAVCLAL---LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 ++ DL TG G V L + + + P + GV+I +A+E+ + N +S+R + D Sbjct: 41 KVCDLCTGCGIVPLIMCRNISKKPPKEIYGVEIMPEAVELFDKSVAENNLSDRIKPVLCD 100 Query: 157 WFSSVEGL----FDVIVSNPPY 174 +G+ FD++ NPPY Sbjct: 101 -LKDPQGVPREYFDIVTVNPPY 121 >gi|291526137|emb|CBK91724.1| Predicted SAM-dependent methyltransferase [Eubacterium rectale DSM 17629] Length = 240 Score = 36.2 bits (82), Expect = 4.7, Method: Compositional matrix adjust. Identities = 23/70 (32%), Positives = 39/70 (55%), Gaps = 1/70 (1%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 + D+GT G V +AL++ + K + VDI+ LE A + NG++E+ T S+ + Sbjct: 14 LCDVGTDHGYVPIALVQGNIIPKAIAVDINKGPLERANEHIRANGLTEQITTRLSNGLEA 73 Query: 161 V-EGLFDVIV 169 + +G D IV Sbjct: 74 IHDGEVDSIV 83 >gi|167749302|ref|ZP_02421429.1| hypothetical protein EUBSIR_00253 [Eubacterium siraeum DSM 15702] gi|167657747|gb|EDS01877.1| hypothetical protein EUBSIR_00253 [Eubacterium siraeum DSM 15702] Length = 245 Score = 36.2 bits (82), Expect = 4.7, Method: Compositional matrix adjust. Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 8/82 (9%) Query: 100 RILDLGTGTGAVCLAL---LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 ++ DL TG G V L + + + P + G++I +A+E+ + N +S+R + D Sbjct: 41 KVCDLCTGCGIVPLIMCRNISKKPPKEIYGIEIMPEAVELFDKSVAENNLSDRIKPVLCD 100 Query: 157 WFSSVEGL----FDVIVSNPPY 174 +G+ FD++ NPPY Sbjct: 101 -LKDPQGIPREYFDIVTVNPPY 121 >gi|84516663|ref|ZP_01004022.1| ribosomal protein L11 methyltransferase, putative [Loktanella vestfoldensis SKA53] gi|84509699|gb|EAQ06157.1| ribosomal protein L11 methyltransferase, putative [Loktanella vestfoldensis SKA53] Length = 287 Score = 36.2 bits (82), Expect = 4.7, Method: Compositional matrix adjust. Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 9/78 (11%) Query: 100 RILDLGTGTGAVCLALLK--ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 RILDLG GT + +A K P DI A+++A++N N + + D L + Sbjct: 142 RILDLGCGTAVLAMAAAKVLGGPVLAS---DIDPVAIDVARANVTANALDGQVDCLVAAG 198 Query: 158 FSS----VEGLFDVIVSN 171 F + G FD+I +N Sbjct: 199 FGGGDPRMTGPFDLIFAN 216 >gi|224006790|ref|XP_002292355.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|220971997|gb|EED90330.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 203 Score = 36.2 bits (82), Expect = 4.8, Method: Compositional matrix adjust. Identities = 42/132 (31%), Positives = 61/132 (46%), Gaps = 13/132 (9%) Query: 47 KH-ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLG 105 KH ESI L R F N ++ L E P + L S + ++ + + ILDLG Sbjct: 4 KHLESILSSLPHRVFPNPKIEL-----EQYPTSFQLTSSIVLTAISKNDAGPNRTILDLG 58 Query: 106 TGTGAVCL--ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG 163 GTG + L A+ S + VD +ALE+A+ N V V E + D G Sbjct: 59 CGTGMLGLGFAIANCSSVYL---VDCDDEALEMAREN-VEYLVEEELIGTECDGVDGEGG 114 Query: 164 -LFDVIVSNPPY 174 L D +++NPP+ Sbjct: 115 CLVDTVITNPPF 126 >gi|182418012|ref|ZP_02949318.1| methyltransferase [Clostridium butyricum 5521] gi|237667114|ref|ZP_04527098.1| methyltransferase [Clostridium butyricum E4 str. BoNT E BL5262] gi|182378183|gb|EDT75718.1| methyltransferase [Clostridium butyricum 5521] gi|237655462|gb|EEP53018.1| methyltransferase [Clostridium butyricum E4 str. BoNT E BL5262] Length = 387 Score = 36.2 bits (82), Expect = 4.8, Method: Compositional matrix adjust. Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 1/58 (1%) Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS-SVEGLFDVIVSNPPYIESV 178 K +G DI K L++A NA GV + + D+ S + IVSNPPY E + Sbjct: 251 LKIIGYDIDYKTLKVAMENAKKAGVDKYIQFQKRDFMEFSTSRKYGFIVSNPPYGERI 308 >gi|156358208|ref|XP_001624415.1| predicted protein [Nematostella vectensis] gi|156211193|gb|EDO32315.1| predicted protein [Nematostella vectensis] Length = 252 Score = 36.2 bits (82), Expect = 4.8, Method: Compositional matrix adjust. Identities = 36/147 (24%), Positives = 61/147 (41%), Gaps = 9/147 (6%) Query: 36 FFLTNAIVRSLK--HESIHRI-LGWRDFYNVRLTLSSDTFEPRPET---ELLVDSALAFS 89 FF TNA V ++ ++ R+ + RD+ F E LV A Sbjct: 6 FFDTNAAVEKMRIISQTKKRVTINQRDYVVSPTVFDGSVFGEWKYNFLVEELVSMARGLL 65 Query: 90 LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 + ++ L++G G GA+ + + P + DI+ A+E NA +GV Sbjct: 66 KQKSNTESSLKFLEVGAGMGAIAIEFALQVPQAEVWATDINPAAVEDVAENACLHGVENS 125 Query: 150 FDTLQSDWF--SSVEGL-FDVIVSNPP 173 +Q+D F ++G+ FD+I P Sbjct: 126 VTAIQADVFDCDGLKGMKFDMIFFRQP 152 >gi|38233824|ref|NP_939591.1| putative precorrin-6Y C5,15-methyltransferase [Corynebacterium diphtheriae NCTC 13129] gi|38200085|emb|CAE49765.1| Putative precorrin-6Y C5,15-methyltransferase [Corynebacterium diphtheriae] Length = 415 Score = 36.2 bits (82), Expect = 4.8, Method: Compositional matrix adjust. Identities = 27/103 (26%), Positives = 47/103 (45%), Gaps = 11/103 (10%) Query: 76 PETELLVDSAL------AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129 P++E + D L A ++ + + + D+G G+G++ + L+ +P V +I Sbjct: 230 PDSEYVTDGQLTKQHVRALAISALAPKPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEI 289 Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNP 172 S + E SNA+ GVS+R Q FD + NP Sbjct: 290 SEERRERILSNAINLGVSDRIAVQQ-----GAPRAFDDVPDNP 327 >gi|121998457|ref|YP_001003244.1| type 12 methyltransferase [Halorhodospira halophila SL1] gi|121589862|gb|ABM62442.1| glycine/sarcosine N-methyltransferase [Halorhodospira halophila SL1] Length = 268 Score = 36.2 bits (82), Expect = 4.8, Method: Compositional matrix adjust. Identities = 44/167 (26%), Positives = 67/167 (40%), Gaps = 31/167 (18%) Query: 88 FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147 F + ++KR R+LD+ TGTG + L + F+ V D S + L A N G Sbjct: 50 FFIQELKKRGAKRVLDVATGTGFHSVRLREAG--FEVVSADGSAEMLAKAFENGRKRGHI 107 Query: 148 ERFDTLQSDW---FSSVEGLFDVIVSNPPYIESVIVDC------------------LGLE 186 R T+Q DW + G +D I+ + +C L L+ Sbjct: 108 LR--TVQVDWRWLNQDIHGRYDAIICLGNSFTHLFNECDRRKTLAEFYSALNHDGVLILD 165 Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVS---RHLNKDGLCSVEIGYN 230 R++D LD G D Y D VS H++ DGL + ++ Sbjct: 166 QRNYDS--ILDHGYDSSHTYYYCGDDVSVYPEHVD-DGLARFKYAFS 209 >gi|312897474|ref|ZP_07756898.1| methyltransferase small domain protein [Megasphaera micronuciformis F0359] gi|310621535|gb|EFQ05071.1| methyltransferase small domain protein [Megasphaera micronuciformis F0359] Length = 244 Score = 36.2 bits (82), Expect = 4.8, Method: Compositional matrix adjust. Identities = 28/86 (32%), Positives = 42/86 (48%), Gaps = 7/86 (8%) Query: 97 DVVR--ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154 DV++ LDLGTGT A+ L +L + ++++ +IA N V NG + Sbjct: 42 DVIKGPTLDLGTGTAAIPL-ILSARGATEITALELNPVMADIAARNVVLNGKESCVVVRR 100 Query: 155 SDWFSSVE----GLFDVIVSNPPYIE 176 D+ E G F V+ +NPPY E Sbjct: 101 GDYRRIEELFPAGSFSVVYANPPYRE 126 >gi|225686061|ref|YP_002734033.1| methyltransferase [Brucella melitensis ATCC 23457] gi|256043126|ref|ZP_05446068.1| methyltransferase [Brucella melitensis bv. 1 str. Rev.1] gi|256111892|ref|ZP_05452848.1| methyltransferase [Brucella melitensis bv. 3 str. Ether] gi|256262818|ref|ZP_05465350.1| conserved hypothetical protein [Brucella melitensis bv. 2 str. 63/9] gi|260564348|ref|ZP_05834833.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M] gi|265989558|ref|ZP_06102115.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. Rev.1] gi|265993340|ref|ZP_06105897.1| conserved hypothetical protein [Brucella melitensis bv. 3 str. Ether] gi|225642166|gb|ACO02079.1| methyltransferase [Brucella melitensis ATCC 23457] gi|260151991|gb|EEW87084.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M] gi|262764210|gb|EEZ10242.1| conserved hypothetical protein [Brucella melitensis bv. 3 str. Ether] gi|263000227|gb|EEZ12917.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. Rev.1] gi|263092639|gb|EEZ16860.1| conserved hypothetical protein [Brucella melitensis bv. 2 str. 63/9] gi|326410385|gb|ADZ67449.1| methyltransferase [Brucella melitensis M28] gi|326553678|gb|ADZ88317.1| methyltransferase [Brucella melitensis M5-90] Length = 187 Score = 36.2 bits (82), Expect = 4.8, Method: Compositional matrix adjust. Identities = 39/130 (30%), Positives = 60/130 (46%), Gaps = 14/130 (10%) Query: 53 RILGWRDFYNVRLTLSSDTFEPRPETELLVDS---ALAFSLPRIEKRDVVRILDLGTGTG 109 RI+G + + R ++ T RP T+ +S LA S P +K + VR+LDL GTG Sbjct: 2 RIVGGK--FRGRALVTPSTNAIRPTTDRTRESLFNILAHSFP--DKVEGVRVLDLFAGTG 57 Query: 110 AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-----RFDTLQSDWFSSVEGL 164 A+ L L + V+ S I + N G+ R D Q ++E Sbjct: 58 ALGLEALSRGARYATF-VEESADGRGILRQNIEALGLQGHTKILRRDACQLGIVGTME-P 115 Query: 165 FDVIVSNPPY 174 FD++ ++PPY Sbjct: 116 FDLVFADPPY 125 >gi|151301132|ref|NP_001093089.1| methyltransferase [Bombyx mori] gi|87248173|gb|ABD36139.1| S-adenosylmethionine-dependent methyltransferase [Bombyx mori] gi|95102706|gb|ABF51291.1| methyltransferase [Bombyx mori] Length = 214 Score = 36.2 bits (82), Expect = 4.8, Method: Compositional matrix adjust. Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 8/79 (10%) Query: 101 ILDLGTGTGAVCL-ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ILD G G G + + A+L + F V +D ALE+ + N + E D +Q D+ S Sbjct: 56 ILDAGCGPGNLSIGAVLLGAGFVTSVEID--ADALEVFQEN-IQEMEIENIDIVQCDFLS 112 Query: 160 SV----EGLFDVIVSNPPY 174 E +FD ++ NPP+ Sbjct: 113 ESYFRWENMFDTVIMNPPF 131 >gi|37526150|ref|NP_929494.1| hypothetical protein plu2237 [Photorhabdus luminescens subsp. laumondii TTO1] gi|36785580|emb|CAE14530.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii TTO1] Length = 315 Score = 36.2 bits (82), Expect = 4.8, Method: Compositional matrix adjust. Identities = 18/37 (48%), Positives = 24/37 (64%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137 +LDLG GTG L L P + VG+D++ KALE+A Sbjct: 38 VLDLGCGTGHRLLGLASMYPDTQFVGIDMTDKALEVA 74 >gi|317407433|gb|EFV87394.1| SAM-dependent methyltransferase [Achromobacter xylosoxidans C54] Length = 284 Score = 36.2 bits (82), Expect = 4.8, Method: Compositional matrix adjust. Identities = 26/94 (27%), Positives = 46/94 (48%), Gaps = 6/94 (6%) Query: 76 PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135 P + LVD L + R+ RD R++DLG+G G + + + G++ + + Sbjct: 64 PTPQALVDKML--DMARVTPRD--RLMDLGSGDGRTVITAAQRG--LRAKGIEYNPDLVT 117 Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIV 169 +++SNA GV++R +D F + DVI Sbjct: 118 LSRSNAAKAGVADRATFEVADLFETDLSQADVIT 151 >gi|315923962|ref|ZP_07920190.1| methyltransferase [Pseudoramibacter alactolyticus ATCC 23263] gi|315622802|gb|EFV02755.1| methyltransferase [Pseudoramibacter alactolyticus ATCC 23263] Length = 259 Score = 36.2 bits (82), Expect = 4.8, Method: Compositional matrix adjust. Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 2/55 (3%) Query: 96 RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150 R + ++L+ G GTG + L L K+ F+ VD+S + L +A A T G+ RF Sbjct: 47 RPIKKVLEFGCGTGNITLELAKKG--FEVTAVDLSEEMLTVADEKADTAGLPVRF 99 >gi|302850509|ref|XP_002956781.1| hypothetical protein VOLCADRAFT_97821 [Volvox carteri f. nagariensis] gi|300257841|gb|EFJ42084.1| hypothetical protein VOLCADRAFT_97821 [Volvox carteri f. nagariensis] Length = 322 Score = 36.2 bits (82), Expect = 4.8, Method: Compositional matrix adjust. Identities = 39/150 (26%), Positives = 64/150 (42%), Gaps = 18/150 (12%) Query: 27 DSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVD-SA 85 +S+ D+ L + V L +SIH+ +G ++ PRP+ V + Sbjct: 70 NSLGDEALSALLEDEDVPELTVDSIHKFIGSSRYHTAGGV-------PRPKILAQVSGTG 122 Query: 86 LA-FSLPRIEK--RDVV-------RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135 LA + + R +K RD+V R+LD G G G L + K P K VD+ + LE Sbjct: 123 LAPWEIHRPQKFVRDLVLRRCFSGRVLDAGCGIGDNALYVAKACPGAKVTAVDVVPRCLE 182 Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEGLF 165 A + A + + D + +D + G Sbjct: 183 FAAAKANLRNMRNQLDLVVADLLENDSGCL 212 >gi|319407489|emb|CBI81138.1| ribosomal protein L11 methyltransferase [Bartonella sp. 1-1C] Length = 289 Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust. Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 9/85 (10%) Query: 93 IEKRDVVRILDLGTGTG--AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150 I+ + LDLGTG+G A+ +A+LK P + DI A+++A+ N NGV++ Sbjct: 146 IQNENPKNALDLGTGSGILAIGIAMLK--PIVV-LAADIDPIAIKVAQQNIRFNGVTDYV 202 Query: 151 DTLQSDWFS----SVEGLFDVIVSN 171 + FS + FD+IV+N Sbjct: 203 TAITITGFSDNKVASRAPFDLIVAN 227 >gi|302557047|ref|ZP_07309389.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptomyces griseoflavus Tu4000] gi|302474665|gb|EFL37758.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptomyces griseoflavus Tu4000] Length = 286 Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust. Identities = 15/34 (44%), Positives = 22/34 (64%) Query: 54 ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALA 87 ++GW +F+ R+T+ F PR TE LV+ ALA Sbjct: 71 VVGWAEFHGRRITVEPGVFVPRRRTEFLVEQALA 104 >gi|302846254|ref|XP_002954664.1| hypothetical protein VOLCADRAFT_33370 [Volvox carteri f. nagariensis] gi|300260083|gb|EFJ44305.1| hypothetical protein VOLCADRAFT_33370 [Volvox carteri f. nagariensis] Length = 214 Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust. Identities = 30/112 (26%), Positives = 53/112 (47%), Gaps = 11/112 (9%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 +++++ GTG G + L + V G +++ + +A+ NA G+SER+ S Sbjct: 31 LKVVEFGTGDGKPVINALNVTRLGCVVYGFELNPISAGLARDNAAAFGMSERYQVGTSAP 90 Query: 158 FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209 S G +++NPPY+ + D L E L GG+DG R++ Sbjct: 91 NSPTAGAV-CLIANPPYLPAPNSDILMPE---------LHGGVDGGELTRSL 132 >gi|296876980|ref|ZP_06901024.1| probable methyltransferase [Streptococcus parasanguinis ATCC 15912] gi|296432015|gb|EFH17818.1| probable methyltransferase [Streptococcus parasanguinis ATCC 15912] Length = 182 Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust. Identities = 24/84 (28%), Positives = 41/84 (48%), Gaps = 4/84 (4%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+LDL G+G + + + + V V+ +A EI +N ERF L+ + Sbjct: 47 RVLDLYAGSGGLSIEAVSRG-MSEAVLVERDRRAQEIVAANIAMTKEKERFQLLKMEAKQ 105 Query: 160 SV---EGLFDVIVSNPPYIESVIV 180 ++ G FD++ +PPY + IV Sbjct: 106 ALGLLTGTFDLVFLDPPYAKEEIV 129 >gi|296167043|ref|ZP_06849455.1| thiopurine S-methyltransferase family protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295897600|gb|EFG77194.1| thiopurine S-methyltransferase family protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 222 Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust. Identities = 32/118 (27%), Positives = 51/118 (43%), Gaps = 19/118 (16%) Query: 73 EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCK 132 EP+PE L+++ +LD G G AV L L + F VG+D S Sbjct: 25 EPQPEIAALIEAGKFHG----------DVLDAGCGEAAVSLFLAERG--FTTVGLDQSPT 72 Query: 133 ALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRD 189 A+++A A G++ FD F +G F IV +S + + +E+R+ Sbjct: 73 AIKLATEKAARRGLANATFDVADISAFGGYDGRFGTIV------DSTLFHSMPVELRE 124 >gi|163841474|ref|YP_001625879.1| methyltransferase [Renibacterium salmoninarum ATCC 33209] gi|162954950|gb|ABY24465.1| methyltransferase [Renibacterium salmoninarum ATCC 33209] Length = 544 Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust. Identities = 40/146 (27%), Positives = 57/146 (39%), Gaps = 16/146 (10%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS---------ERF 150 R LDLGTG G LL+ DIS +AL + N + N + R Sbjct: 165 RALDLGTGCGIQTFHLLRHVRHV--TATDISERALAFTRFNLLLNATALAVDPTDLEHRV 222 Query: 151 DTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209 V G FD+IVSNPP++ + D L F R DGG+ G ++ Sbjct: 223 SLRLGSLLEPVRGQRFDLIVSNPPFVITPRYDG-ELSADQFTYR---DGGLPGDEIVSSL 278 Query: 210 ADGVSRHLNKDGLCSVEIGYNQKVDV 235 + L + G + + +VD Sbjct: 279 VRALPDALVEGGTAQLLGNWEVRVDA 304 >gi|153829117|ref|ZP_01981784.1| conserved hypothetical protein [Vibrio cholerae 623-39] gi|148875375|gb|EDL73510.1| conserved hypothetical protein [Vibrio cholerae 623-39] Length = 340 Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust. Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 2/75 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 +++D+G G G + + K + + DIS A+ ++ V N + SD FS Sbjct: 203 KVIDIGCGAGVLGCVMAKLNSHIELEMTDISALAIRSSQETLVANQLHGH--VYPSDMFS 260 Query: 160 SVEGLFDVIVSNPPY 174 +D IV+NPP+ Sbjct: 261 DTGHHYDYIVTNPPF 275 >gi|28868361|ref|NP_790980.1| ribosomal RNA small subunit methyltransferase C [Pseudomonas syringae pv. tomato str. DC3000] gi|81732241|sp|Q887Y4|RSMC_PSESM RecName: Full=Ribosomal RNA small subunit methyltransferase C; AltName: Full=16S rRNA m2G1207 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rsmC gi|28851598|gb|AAO54675.1| ribosomal RNA small subunit methyltransferase C [Pseudomonas syringae pv. tomato str. DC3000] gi|331018085|gb|EGH98141.1| ribosomal RNA small subunit methyltransferase C [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 332 Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust. Identities = 27/105 (25%), Positives = 44/105 (41%), Gaps = 2/105 (1%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 +D A L I+K +LD G G G + A+ + P V +D+ A ++ Sbjct: 176 LDRGSALLLENIDKLPSGNLLDFGCGAGVLGAAVKRRYPHNDVVMLDVDAFATASSRLTL 235 Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLE 186 NG+ + T D + + I+SNPP+ V D + E Sbjct: 236 AANGLEAQVVT--GDGIDAAPMGLNTILSNPPFHVGVHTDYMATE 278 >gi|308064266|gb|ADO06153.1| hypothetical protein HPSAT_07255 [Helicobacter pylori Sat464] Length = 238 Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust. Identities = 26/87 (29%), Positives = 45/87 (51%), Gaps = 4/87 (4%) Query: 88 FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147 FS P I+ D ILD+G+G G + L +++P V+ K ++ NA+ + Sbjct: 27 FSRPFIKNSDA--ILDIGSGCGVLGLLCARDNPLASVHLVEKDGKMAFCSQKNALKFPNA 84 Query: 148 ERFDTLQSDWFSSVEGLFDVIVSNPPY 174 + F++ D+ + L+D IV NPP+ Sbjct: 85 QVFESDFLDFKPPI--LYDAIVCNPPF 109 >gi|282878591|ref|ZP_06287369.1| ribosomal protein L11 methyltransferase [Prevotella buccalis ATCC 35310] gi|281299291|gb|EFA91682.1| ribosomal protein L11 methyltransferase [Prevotella buccalis ATCC 35310] Length = 287 Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust. Identities = 34/111 (30%), Positives = 51/111 (45%), Gaps = 20/111 (18%) Query: 78 TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137 T +++ + L SL R+LD G GTG + +A LK VG DI ++E Sbjct: 136 TRMMIGAMLQLSLKG------KRVLDSGCGTGILGIAALKLGAEAV-VGFDIDEWSVENT 188 Query: 138 KSNAVTNGVSERFDTLQSDW--FSSVEGLFDVIVSN----------PPYIE 176 + NA N V + + D S V G+FDV+++N P Y+E Sbjct: 189 QHNAAINEV-DNIEVFHGDAHVLSHVSGVFDVVLANINRNILLNDMPAYLE 238 >gi|260771195|ref|ZP_05880122.1| ribosomal RNA small subunit methyltransferase C [Vibrio furnissii CIP 102972] gi|260613792|gb|EEX38984.1| ribosomal RNA small subunit methyltransferase C [Vibrio furnissii CIP 102972] Length = 340 Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust. Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 2/75 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LD G G G + + P DIS A+ ++ NG+S R SD +S Sbjct: 203 KVLDFGCGAGVLGGVMAMLYPNIALEMCDISALAIRSSQETLAANGLSGR--VFASDVYS 260 Query: 160 SVEGLFDVIVSNPPY 174 + IV+NPP+ Sbjct: 261 DTASDYQFIVTNPPF 275 >gi|256783490|ref|ZP_05521921.1| hypothetical protein SlivT_03280 [Streptomyces lividans TK24] gi|289767368|ref|ZP_06526746.1| conserved hypothetical protein [Streptomyces lividans TK24] gi|289697567|gb|EFD64996.1| conserved hypothetical protein [Streptomyces lividans TK24] Length = 248 Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust. Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 1/58 (1%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 R+LDL +G+G + ++ F G GVDI E A++ A GV++R D + D Sbjct: 38 TRVLDLASGSGEMLCTWARDLGF-TGTGVDIGSLFTEQARARAAELGVADRVDFIHGD 94 >gi|251783101|ref|YP_002997404.1| methyltransferase [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|242391731|dbj|BAH82190.1| methyltransferase [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|323127851|gb|ADX25148.1| methyltransferase [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 384 Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust. Identities = 23/58 (39%), Positives = 35/58 (60%), Gaps = 3/58 (5%) Query: 126 GVDISCKALEIAKSNAVTNGVSE--RFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181 G DI + +EIAKSNA G+S+ F ++ F + + + VI+SNPPY E ++ D Sbjct: 261 GFDIDSRMIEIAKSNAEEAGLSDVITFKQMRLQDFRT-DKVNGVIISNPPYGERLLDD 317 >gi|119776444|ref|YP_929184.1| hypothetical protein Sama_3312 [Shewanella amazonensis SB2B] gi|119768944|gb|ABM01515.1| conserved hypothetical protein [Shewanella amazonensis SB2B] Length = 211 Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust. Identities = 38/142 (26%), Positives = 57/142 (40%), Gaps = 22/142 (15%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 R+LDL G G + L L P G D+S + L +AK+ A+ +G F L Sbjct: 50 TRLLDLACGPGTLSLHLKSRFPHLAITGTDLSPRMLSLAKA-ALPDG---EFHCLDLRDT 105 Query: 159 SSVEGLFDVIVS--NPPYIES-----VIVDCLGLEVR-----------DFDPRISLDGGI 200 S + G FDVI PY++S ++ DC + D P + Sbjct: 106 SRLAGEFDVIACAFGLPYLDSQSAAQLLQDCAAKLAKGGLMYLSFIECDTTPHSQTNSHG 165 Query: 201 DGLSHYRTIADGVSRHLNKDGL 222 D + A+G+ L+ GL Sbjct: 166 DSVWRQGHTAEGIDSQLSAQGL 187 >gi|154250316|ref|YP_001411141.1| methyltransferase small [Fervidobacterium nodosum Rt17-B1] gi|154154252|gb|ABS61484.1| methyltransferase small [Fervidobacterium nodosum Rt17-B1] Length = 223 Score = 36.2 bits (82), Expect = 5.0, Method: Compositional matrix adjust. Identities = 24/84 (28%), Positives = 42/84 (50%), Gaps = 9/84 (10%) Query: 97 DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 D+ +++LG+GTG V AL K + G++I + E+A N + ++ L D Sbjct: 43 DIKNVIELGSGTGIVAFALAKLYNLYV-TGIEIQHELYELAIEGIHVNNLEDKVKFLHCD 101 Query: 157 ------WFSSVEGLFDVIVSNPPY 174 +F + FD++VSN P+ Sbjct: 102 VRDVENYFKAES--FDMVVSNFPF 123 >gi|300771365|ref|ZP_07081241.1| UbiE/COQ5 family methyltransferase [Sphingobacterium spiritivorum ATCC 33861] gi|300762035|gb|EFK58855.1| UbiE/COQ5 family methyltransferase [Sphingobacterium spiritivorum ATCC 33861] Length = 244 Score = 36.2 bits (82), Expect = 5.0, Method: Compositional matrix adjust. Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 6/86 (6%) Query: 86 LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145 L P E ++V LDLG G G C+ K+ +GVD+S K + AK N+ Sbjct: 34 LKMMFPDFENKNV---LDLGCGYGWHCI-YAKQQGASNVIGVDLSAKMIRKAKENSAGLD 89 Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSN 171 + R ++ F++ E FD+++S+ Sbjct: 90 IDYRQMAIEHVDFATEE--FDIVISS 113 >gi|20089604|ref|NP_615679.1| hypothetical protein MA0719 [Methanosarcina acetivorans C2A] gi|19914523|gb|AAM04159.1| conserved hypothetical protein [Methanosarcina acetivorans C2A] Length = 197 Score = 36.2 bits (82), Expect = 5.0, Method: Compositional matrix adjust. Identities = 30/76 (39%), Positives = 37/76 (48%), Gaps = 8/76 (10%) Query: 101 ILDLGTGTG--AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 + DLG GTG A+ LL K VG D KALE+A+ NA GV F + SD Sbjct: 50 VQDLGCGTGILAIGAKLLGAR---KVVGYDTDPKALEVARKNAERLGVEVEF--VCSD-I 103 Query: 159 SSVEGLFDVIVSNPPY 174 V G + NPP+ Sbjct: 104 KKVSGHVKTTLMNPPF 119 >gi|186685491|ref|YP_001868687.1| methyltransferase type 11 [Nostoc punctiforme PCC 73102] gi|186467943|gb|ACC83744.1| Methyltransferase type 11 [Nostoc punctiforme PCC 73102] Length = 265 Score = 36.2 bits (82), Expect = 5.0, Method: Compositional matrix adjust. Identities = 45/134 (33%), Positives = 62/134 (46%), Gaps = 20/134 (14%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGV---GVDISCKALEIAKSNAVTNGVSERFDTLQS 155 + +LD G GTG + L KG G+D S + +EIAK A N + F Sbjct: 55 LSVLDAGCGTGYLARQLC-----LKGASVTGIDFSPQMIEIAKFRASQNNLDIDFHLDSC 109 Query: 156 DWFSSV-EGLFDVIVSNPPYIESVIVDCLGLE--VRDFDPRISLDGGIDGL--SHYRTIA 210 S+ + FD+IVSN V++D L LE +R F+ R+ GI L SH Sbjct: 110 TELKSLPDEQFDMIVSN-----YVLMDLLDLEGAIRAFN-RVLKPSGIAILVFSH-PCFP 162 Query: 211 DGVSRHLNKDGLCS 224 G S +N+DG S Sbjct: 163 QGNSTTVNEDGTVS 176 >gi|114799616|ref|YP_759109.1| putative ribosomal protein L11 methyltransferase PrmA [Hyphomonas neptunium ATCC 15444] gi|114739790|gb|ABI77915.1| putative ribosomal protein L11 methyltransferase PrmA [Hyphomonas neptunium ATCC 15444] Length = 285 Score = 36.2 bits (82), Expect = 5.0, Method: Compositional matrix adjust. Identities = 23/55 (41%), Positives = 31/55 (56%), Gaps = 1/55 (1%) Query: 96 RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150 R R+LDLGTG+G + +A LK VG DI ++ +A+ NA N VS F Sbjct: 143 RKPGRVLDLGTGSGVLAIAALKVGAEM-AVGTDIDRDSVFVARDNARKNHVSRFF 196 >gi|148657852|ref|YP_001278057.1| methyltransferase small [Roseiflexus sp. RS-1] gi|148569962|gb|ABQ92107.1| methyltransferase small [Roseiflexus sp. RS-1] Length = 198 Score = 36.2 bits (82), Expect = 5.0, Method: Compositional matrix adjust. Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 2/74 (2%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 ILDLG G G + + L + P + + D A+ A+ NA N + + + S F Sbjct: 58 ILDLGCGCGVIGIVLARWFPQARVILADRDLLAVRYARHNAALNQ-TPNVEVIGSVGFEH 116 Query: 161 VEGL-FDVIVSNPP 173 + L FD+IVSN P Sbjct: 117 IPALPFDLIVSNIP 130 >gi|325681112|ref|ZP_08160642.1| putative 23S rRNA m5C1962 methyltransferase [Ruminococcus albus 8] gi|324107034|gb|EGC01320.1| putative 23S rRNA m5C1962 methyltransferase [Ruminococcus albus 8] Length = 409 Score = 36.2 bits (82), Expect = 5.1, Method: Compositional matrix adjust. Identities = 26/81 (32%), Positives = 44/81 (54%), Gaps = 9/81 (11%) Query: 100 RILDLGTGTGAVCL-ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 R+LD T TG+ L A + + VD+S A++ AK+NA NG+S++ D + +D F Sbjct: 237 RVLDCFTHTGSFALNAAMGGAEHV--TAVDVSQFAVDTAKANAERNGLSDKMDFVCADVF 294 Query: 159 SSVEGL------FDVIVSNPP 173 + L +D ++ +PP Sbjct: 295 DLLPKLAEEKAGYDFVILDPP 315 >gi|317048909|ref|YP_004116557.1| ubiquinone biosynthesis O-methyltransferase [Pantoea sp. At-9b] gi|316950526|gb|ADU70001.1| ubiquinone biosynthesis O-methyltransferase [Pantoea sp. At-9b] Length = 243 Score = 36.2 bits (82), Expect = 5.1, Method: Compositional matrix adjust. Identities = 25/92 (27%), Positives = 48/92 (52%), Gaps = 8/92 (8%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF-DTLQSDWF 158 ++LD+G G G + ++ +E G+D+ + LE+A+ +A+ +GVS + D Sbjct: 59 KVLDVGCGGGILAESMAREGANV--TGLDMGAEPLEVARLHALESGVSVNYVQQTVEDHA 116 Query: 159 SSVEGLFDVI-----VSNPPYIESVIVDCLGL 185 +S G +DV+ + + P SV++ C L Sbjct: 117 TSHAGEYDVVTCMEMLEHVPDPRSVVLACAQL 148 >gi|254881958|ref|ZP_05254668.1| RNA methyltransferase [Bacteroides sp. 4_3_47FAA] gi|319641039|ref|ZP_07995743.1| RNA methyltransferase [Bacteroides sp. 3_1_40A] gi|254834751|gb|EET15060.1| RNA methyltransferase [Bacteroides sp. 4_3_47FAA] gi|317387283|gb|EFV68158.1| RNA methyltransferase [Bacteroides sp. 3_1_40A] Length = 473 Score = 36.2 bits (82), Expect = 5.1, Method: Compositional matrix adjust. Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 10/80 (12%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF-------DTL 153 + DL TGTG + + +++ K +G++ +A+E AK N+ NG+ D L Sbjct: 329 VYDLYTGTGTIANFVSRQAK--KVIGIEYVPEAIEDAKVNSAINGIDNTLFYAGDMKDIL 386 Query: 154 QSDWFSSVEGLFDVIVSNPP 173 + F + G DVI+++PP Sbjct: 387 TQE-FINQHGRPDVIITDPP 405 >gi|196248986|ref|ZP_03147686.1| Methyltransferase type 12 [Geobacillus sp. G11MC16] gi|196211862|gb|EDY06621.1| Methyltransferase type 12 [Geobacillus sp. G11MC16] Length = 247 Score = 36.2 bits (82), Expect = 5.1, Method: Compositional matrix adjust. Identities = 44/179 (24%), Positives = 71/179 (39%), Gaps = 39/179 (21%) Query: 89 SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148 + R +R +++D+G GTG + + L K ++ GVD+S L IA+ A G+ Sbjct: 29 AFDRYAQRPGRQVIDIGCGTGELAIRLAKAG--WQVSGVDVSEHMLVIAQEKAEAAGIHV 86 Query: 149 RF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSH 205 F + + D FS ++G F + D L + D + Sbjct: 87 PFFEQNMAELDGFSDLDGAF------------IFCDALNYLTDEDDVK------------ 122 Query: 206 YRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 RT + V R L DGL ++ K+DV LF F D+G + + C Sbjct: 123 -RTFS-AVYRALGADGLLLFDVHSVYKMDV--------LFRDAVFADHGEDISYIWTCH 171 >gi|170099690|ref|XP_001881063.1| predicted protein [Laccaria bicolor S238N-H82] gi|164643742|gb|EDR07993.1| predicted protein [Laccaria bicolor S238N-H82] Length = 299 Score = 36.2 bits (82), Expect = 5.1, Method: Compositional matrix adjust. Identities = 28/76 (36%), Positives = 37/76 (48%), Gaps = 4/76 (5%) Query: 100 RILDLGTGTGAVCLALLKESPFFKG---VGVDISCKALEIAKSNAVTNGVSERFDTLQ-S 155 RILD+G G+G V + K KG VGVD S +E AK+N + + LQ Sbjct: 52 RILDVGCGSGEVTFVIDKVVRRQKGGLVVGVDYSESMIEKAKANGIEHAFIGDAQALQIP 111 Query: 156 DWFSSVEGLFDVIVSN 171 + F G FD + SN Sbjct: 112 EEFQEHVGKFDAVFSN 127 >gi|94499825|ref|ZP_01306361.1| methyltransferase, putative [Oceanobacter sp. RED65] gi|94428026|gb|EAT13000.1| methyltransferase, putative [Oceanobacter sp. RED65] Length = 189 Score = 36.2 bits (82), Expect = 5.1, Method: Compositional matrix adjust. Identities = 30/112 (26%), Positives = 54/112 (48%), Gaps = 9/112 (8%) Query: 75 RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134 RP T+ + ++ + P I +LD+ G+GA+ L GV ++ + KA+ Sbjct: 30 RPTTDRVRETLFNWLAPYIP---AAHVLDVFAGSGALGFEALSRGAE-HGVLLEKNAKAV 85 Query: 135 EIAKSNAVTNGVSERFDTLQSD---WFSSVEGLFDVIVSNPPYIESVIVDCL 183 + K N +S D +Q+D + + E FDVI +PP+ + ++ CL Sbjct: 86 KQLKENCQV--LSCNADVVQTDALVFLQNCEQAFDVIFLDPPFNKGLLPSCL 135 >gi|325285562|ref|YP_004261352.1| Ubiquinone/menaquinone biosynthesis methyltransferase ubiE [Cellulophaga lytica DSM 7489] gi|324321016|gb|ADY28481.1| Ubiquinone/menaquinone biosynthesis methyltransferase ubiE [Cellulophaga lytica DSM 7489] Length = 242 Score = 36.2 bits (82), Expect = 5.1, Method: Compositional matrix adjust. Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 1/64 (1%) Query: 93 IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152 I+ + V ILD+ TGTG + + L K K G+DIS LE+ K +S D Sbjct: 53 IKSKKPVTILDIATGTGDLAINLTKTGA-TKITGLDISPGMLEVGKQKVAAKNLSNTIDM 111 Query: 153 LQSD 156 + D Sbjct: 112 IIGD 115 >gi|149414444|ref|XP_001514044.1| PREDICTED: similar to THUMP domain containing 2, partial [Ornithorhynchus anatinus] Length = 343 Score = 36.2 bits (82), Expect = 5.1, Method: Compositional matrix adjust. Identities = 41/159 (25%), Positives = 64/159 (40%), Gaps = 32/159 (20%) Query: 25 DPDSVLDDRQRFFLTNAIVRSLKHESIHRILG--------WR---------------DFY 61 D DS R + AI R+ + + R++G W+ D Y Sbjct: 184 DNDSPFTFRVSCRCSGAIARAFTSQEVGRVIGMTLIKQFAWKADLRNPDLEIFIHLNDMY 243 Query: 62 NV------RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL 115 +V RL L+S T+ + A+A SL I +V LD G G + L Sbjct: 244 SVVGIPVFRLPLASRTYIKTAGLRSTIAWAMA-SLAEINAGSLV--LDPMCGLGTILLEA 300 Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154 KE P +G DIS L++A+ N G+ ++ + L+ Sbjct: 301 AKEWPDANYLGTDISNSQLQVARDNVNAAGLMDKIELLK 339 >gi|307720668|ref|YP_003891808.1| methyltransferase small [Sulfurimonas autotrophica DSM 16294] gi|306978761|gb|ADN08796.1| methyltransferase small [Sulfurimonas autotrophica DSM 16294] Length = 231 Score = 36.2 bits (82), Expect = 5.2, Method: Compositional matrix adjust. Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 3/76 (3%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LD+G G G V L + +++ + V+ + K+NA N +S + + D+ Sbjct: 31 KVLDVGAGCGIVGLLVARDNKKVELEAVEKQEAFIHFCKTNARVNNIS--YKLYECDFLE 88 Query: 160 SVE-GLFDVIVSNPPY 174 E +D I+SNPP+ Sbjct: 89 LTEKNKYDYIISNPPF 104 >gi|294775567|ref|ZP_06741077.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Bacteroides vulgatus PC510] gi|294450617|gb|EFG19107.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Bacteroides vulgatus PC510] Length = 473 Score = 36.2 bits (82), Expect = 5.2, Method: Compositional matrix adjust. Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 10/80 (12%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF-------DTL 153 + DL TGTG + + +++ K +G++ +A+E AK N+ NG+ D L Sbjct: 329 VYDLYTGTGTIANFVSRQAK--KVIGIEYVPEAIEDAKVNSAINGIDNTLFYAGDMKDIL 386 Query: 154 QSDWFSSVEGLFDVIVSNPP 173 + F + G DVI+++PP Sbjct: 387 TQE-FINQHGRPDVIITDPP 405 >gi|157377249|ref|YP_001475849.1| ribosomal protein L11 methyltransferase [Shewanella sediminis HAW-EB3] gi|189037705|sp|A8G0U8|PRMA_SHESH RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11 Mtase gi|157319623|gb|ABV38721.1| ribosomal protein L11 methyltransferase [Shewanella sediminis HAW-EB3] Length = 293 Score = 36.2 bits (82), Expect = 5.2, Method: Compositional matrix adjust. Identities = 18/51 (35%), Positives = 31/51 (60%), Gaps = 1/51 (1%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150 ++D G G+G + +A LK K G+DI +A++ +K+NA NGV ++ Sbjct: 161 EVIDFGCGSGILAVAALKLGAT-KVTGIDIDYQAIDASKANAERNGVEDQL 210 >gi|146318073|ref|YP_001197785.1| N6-adenine-specific DNA methylase [Streptococcus suis 05ZYH33] gi|253751266|ref|YP_003024407.1| RNA methylase family protein [Streptococcus suis SC84] gi|253753167|ref|YP_003026307.1| RNA methylase family protein [Streptococcus suis P1/7] gi|253754990|ref|YP_003028130.1| RNA methylase family protein [Streptococcus suis BM407] gi|145688879|gb|ABP89385.1| Predicted N6-adenine-specific DNA methylase [Streptococcus suis 05ZYH33] gi|251815555|emb|CAZ51138.1| putative RNA methylase family protein [Streptococcus suis SC84] gi|251817454|emb|CAZ55195.1| putative RNA methylase family protein [Streptococcus suis BM407] gi|251819412|emb|CAR44876.1| putative RNA methylase family protein [Streptococcus suis P1/7] gi|292557835|gb|ADE30836.1| Putative RNA methylase [Streptococcus suis GZ1] gi|319757546|gb|ADV69488.1| N6-adenine-specific DNA methylase [Streptococcus suis JS14] Length = 388 Score = 36.2 bits (82), Expect = 5.2, Method: Compositional matrix adjust. Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 13/64 (20%) Query: 125 VGVDISCKALEIAKSNAVTNGVSE-------RFDTLQSDWFSSVEGLFDVIVSNPPYIES 177 G DI + +EIAK NA GV + R L++D + G VI+SNPPY E Sbjct: 260 TGSDIDARMIEIAKKNAFAAGVEQDIVFKQMRVQDLRTD---KING---VIISNPPYGER 313 Query: 178 VIVD 181 ++ D Sbjct: 314 LLDD 317 >gi|21225490|ref|NP_631269.1| hypothetical protein SCO7213 [Streptomyces coelicolor A3(2)] gi|8546924|emb|CAB94636.1| conserved hypothetical protein SC2H12.12 [Streptomyces coelicolor A3(2)] Length = 248 Score = 36.2 bits (82), Expect = 5.2, Method: Compositional matrix adjust. Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 1/58 (1%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 R+LDL +G+G + ++ F G GVDI E A++ A GV++R D + D Sbjct: 38 TRVLDLASGSGEMLCTWARDLGF-TGTGVDIGSLFTEQARARAAELGVADRVDFIHGD 94 >gi|322388990|ref|ZP_08062560.1| ribosomal RNA small subunit methyltransferase D [Streptococcus parasanguinis ATCC 903] gi|321144295|gb|EFX39703.1| ribosomal RNA small subunit methyltransferase D [Streptococcus parasanguinis ATCC 903] Length = 182 Score = 36.2 bits (82), Expect = 5.2, Method: Compositional matrix adjust. Identities = 24/84 (28%), Positives = 41/84 (48%), Gaps = 4/84 (4%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+LDL G+G + + + + V V+ +A EI +N ERF L+ + Sbjct: 47 RVLDLYAGSGGLSIEAVSRG-MSEAVLVERDRRAQEIVAANIAMTKEKERFQLLKMEAKQ 105 Query: 160 SV---EGLFDVIVSNPPYIESVIV 180 ++ G FD++ +PPY + IV Sbjct: 106 ALGLLTGTFDLVFLDPPYAKEEIV 129 >gi|224010878|ref|XP_002294396.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|220969891|gb|EED88230.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 548 Score = 36.2 bits (82), Expect = 5.2, Method: Compositional matrix adjust. Identities = 19/47 (40%), Positives = 30/47 (63%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147 ++D+ GTG + L L+KE VGVDI+ A+ A++NA NG++ Sbjct: 376 LVDVCCGTGTIGLTLMKEGVVGSLVGVDIAKPAILDARANAEKNGMT 422 >gi|77164110|ref|YP_342635.1| UbiE/COQ5 methyltransferase [Nitrosococcus oceani ATCC 19707] gi|254435711|ref|ZP_05049218.1| Methyltransferase domain family [Nitrosococcus oceani AFC27] gi|76882424|gb|ABA57105.1| UbiE/COQ5 methyltransferase [Nitrosococcus oceani ATCC 19707] gi|207088822|gb|EDZ66094.1| Methyltransferase domain family [Nitrosococcus oceani AFC27] Length = 346 Score = 36.2 bits (82), Expect = 5.2, Method: Compositional matrix adjust. Identities = 30/81 (37%), Positives = 42/81 (51%), Gaps = 9/81 (11%) Query: 100 RILDLGTGTGAVCLALLK-ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL----- 153 R+LDLG G+G AL + P K VGVD++ + L +A+S+ + S FD + Sbjct: 64 RVLDLGCGSGRDVYALAQLVGPEGKVVGVDMTDEQLAVAQSHQGWHTESFGFDNVSFIKG 123 Query: 154 ---QSDWFSSVEGLFDVIVSN 171 + D G FDVIVSN Sbjct: 124 YIEKLDELDLEPGSFDVIVSN 144 >gi|150018307|ref|YP_001310561.1| methyltransferase type 11 [Clostridium beijerinckii NCIMB 8052] gi|149904772|gb|ABR35605.1| Methyltransferase type 11 [Clostridium beijerinckii NCIMB 8052] Length = 209 Score = 36.2 bits (82), Expect = 5.2, Method: Compositional matrix adjust. Identities = 28/76 (36%), Positives = 38/76 (50%), Gaps = 6/76 (7%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 +ILD+G GTG V + L F G+ GVDIS ++IAK N G S++ Sbjct: 51 KILDVGCGTGNVLIKLSANYKF--GLYGVDISENMIKIAKKNL---GDKAELKVGDSEYI 105 Query: 159 SSVEGLFDVIVSNPPY 174 + FDVIV N + Sbjct: 106 PWEDNSFDVIVCNASF 121 >gi|116513947|ref|YP_812853.1| ribosomal protein L11 methyltransferase [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|122275283|sp|Q04AV7|PRMA_LACDB RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11 Mtase gi|116093262|gb|ABJ58415.1| [LSU ribosomal protein L11P]-lysine N-methyltransferase [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] Length = 314 Score = 36.2 bits (82), Expect = 5.2, Method: Compositional matrix adjust. Identities = 24/74 (32%), Positives = 42/74 (56%), Gaps = 4/74 (5%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 + + D+GTG+G + +A K K V DIS +++ A+ NA NG+ + ++ Sbjct: 178 LTVADVGTGSGILAIAAHKLGA--KSVLATDISDESMTAAEENAALNGIYD-IALQKTSL 234 Query: 158 FSSVEGLFDVIVSN 171 + V+G FD+IV+N Sbjct: 235 LADVDGKFDLIVAN 248 >gi|213967188|ref|ZP_03395337.1| ribosomal RNA small subunit methyltransferase C [Pseudomonas syringae pv. tomato T1] gi|301381077|ref|ZP_07229495.1| ribosomal RNA small subunit methyltransferase C [Pseudomonas syringae pv. tomato Max13] gi|302061548|ref|ZP_07253089.1| ribosomal RNA small subunit methyltransferase C [Pseudomonas syringae pv. tomato K40] gi|302133231|ref|ZP_07259221.1| ribosomal RNA small subunit methyltransferase C [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213928030|gb|EEB61576.1| ribosomal RNA small subunit methyltransferase C [Pseudomonas syringae pv. tomato T1] Length = 332 Score = 36.2 bits (82), Expect = 5.3, Method: Compositional matrix adjust. Identities = 27/105 (25%), Positives = 44/105 (41%), Gaps = 2/105 (1%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 +D A L I+K +LD G G G + A+ + P V +D+ A ++ Sbjct: 176 LDRGSALLLENIDKLPSGNLLDFGCGAGVLGAAVKRRYPHNDVVMLDVDAFATASSRLTL 235 Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLE 186 NG+ + T D + + I+SNPP+ V D + E Sbjct: 236 AANGLEAQVVT--GDGIDAAPMGLNTILSNPPFHVGVHTDYMATE 278 >gi|163743145|ref|ZP_02150527.1| hypothetical protein RG210_14630 [Phaeobacter gallaeciensis 2.10] gi|161383562|gb|EDQ07949.1| hypothetical protein RG210_14630 [Phaeobacter gallaeciensis 2.10] Length = 404 Score = 36.2 bits (82), Expect = 5.3, Method: Compositional matrix adjust. Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 6/53 (11%) Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFS-----SVEGL-FDVIVSNPP 173 VD S AL++A+ A N ++RF Q D F + EG+ FDV++ +PP Sbjct: 258 VDGSAPALDLAREGAAANDFADRFAARQGDAFEVLTQLAEEGVQFDVVICDPP 310 >gi|150005861|ref|YP_001300605.1| RNA methyltransferase [Bacteroides vulgatus ATCC 8482] gi|149934285|gb|ABR40983.1| RNA methyltransferase [Bacteroides vulgatus ATCC 8482] Length = 473 Score = 36.2 bits (82), Expect = 5.3, Method: Compositional matrix adjust. Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 10/80 (12%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF-------DTL 153 + DL TGTG + + +++ K +G++ +A+E AK N+ NG+ D L Sbjct: 329 VYDLYTGTGTIANFVSRQAK--KVIGIEYVPEAIEDAKVNSAINGIDNTLFYAGDMKDIL 386 Query: 154 QSDWFSSVEGLFDVIVSNPP 173 + F + G DVI+++PP Sbjct: 387 TQE-FINQHGRPDVIITDPP 405 >gi|329766688|ref|ZP_08258231.1| 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Candidatus Nitrosoarchaeum limnia SFB1] gi|329136943|gb|EGG41236.1| 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Candidatus Nitrosoarchaeum limnia SFB1] Length = 259 Score = 36.2 bits (82), Expect = 5.3, Method: Compositional matrix adjust. Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 7/71 (9%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LD+G GTG ++ K+ +G+D S +A++IAKS + + F + S Sbjct: 49 VLDVGCGTGYFAYSVAKKGA--NVLGIDFSIEAIQIAKSQYIHPNL--EFKAID---VSK 101 Query: 161 VEGLFDVIVSN 171 ++ FDVIVSN Sbjct: 102 IKEKFDVIVSN 112 >gi|119489671|ref|ZP_01622430.1| hypothetical protein L8106_13140 [Lyngbya sp. PCC 8106] gi|119454408|gb|EAW35557.1| hypothetical protein L8106_13140 [Lyngbya sp. PCC 8106] Length = 245 Score = 36.2 bits (82), Expect = 5.3, Method: Compositional matrix adjust. Identities = 27/81 (33%), Positives = 38/81 (46%), Gaps = 5/81 (6%) Query: 95 KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---D 151 K V +LDLG G G + +L + P K V +D S + K+ + F D Sbjct: 43 KSQVNTVLDLGCGDGILGRTILTQYPHAKVVFLDFSEAMISAVKNKFQNSDYQVNFVLGD 102 Query: 152 TLQSDWFSSVE--GLFDVIVS 170 Q+ W + V+ G FDVIVS Sbjct: 103 FAQTSWVNWVQDFGKFDVIVS 123 >gi|89095195|ref|ZP_01168119.1| hypothetical protein MED92_08565 [Oceanospirillum sp. MED92] gi|89080553|gb|EAR59801.1| hypothetical protein MED92_08565 [Oceanospirillum sp. MED92] Length = 378 Score = 36.2 bits (82), Expect = 5.3, Method: Compositional matrix adjust. Identities = 30/93 (32%), Positives = 48/93 (51%), Gaps = 7/93 (7%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN---AVTNGVSERFDTLQSD 156 RI+DLG G G V L + +P + VD S A+ A N A N + F L +D Sbjct: 236 RIIDLGCGNGVVGLMAAERNPSAELTFVDESFMAVASASENFNAAFANTRTGSF--LATD 293 Query: 157 WFSSVE-GLFDVIVSNPPY-IESVIVDCLGLEV 187 +E D+I++NPP+ ++V+ D + L++ Sbjct: 294 CLKGIEKNSADLILNNPPFHQQNVVGDFIALQM 326 >gi|309809377|ref|ZP_07703239.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Lactobacillus iners SPIN 2503V10-D] gi|308170288|gb|EFO72319.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Lactobacillus iners SPIN 2503V10-D] Length = 449 Score = 36.2 bits (82), Expect = 5.3, Method: Compositional matrix adjust. Identities = 31/95 (32%), Positives = 49/95 (51%), Gaps = 13/95 (13%) Query: 86 LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145 LA ++ DVV +D +G G + L++ K K +GV+I A++ AK NA+ NG Sbjct: 291 LAIQKAQLTSDDVV--IDAYSGIGTIGLSVAKHVK--KVLGVEIVRDAVKDAKKNAILNG 346 Query: 146 VSE------RFDTLQSDWFSSVEGL-FDVIVSNPP 173 ++ + + L W + EGL DVI +PP Sbjct: 347 INNAEYFEGKAEELMPQWAN--EGLKTDVIFVDPP 379 >gi|149597718|ref|XP_001521263.1| PREDICTED: similar to HEMK homolog, partial [Ornithorhynchus anatinus] Length = 182 Score = 36.2 bits (82), Expect = 5.3, Method: Compositional matrix adjust. Identities = 19/47 (40%), Positives = 27/47 (57%) Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209 G D++VSNPPYI + L E+ ++ +LDGG DG+ R I Sbjct: 87 GPVDLVVSNPPYIFQSDMAHLAAEILSYEDPDALDGGEDGMKVIRDI 133 >gi|21224237|ref|NP_630016.1| methyltransferase [Streptomyces coelicolor A3(2)] gi|256784679|ref|ZP_05523110.1| methyltransferase [Streptomyces lividans TK24] gi|289768565|ref|ZP_06527943.1| methyltransferase [Streptomyces lividans TK24] gi|2808756|emb|CAA16186.1| putative methyltransferase [Streptomyces coelicolor A3(2)] gi|289698764|gb|EFD66193.1| methyltransferase [Streptomyces lividans TK24] Length = 362 Score = 36.2 bits (82), Expect = 5.3, Method: Compositional matrix adjust. Identities = 21/76 (27%), Positives = 41/76 (53%), Gaps = 3/76 (3%) Query: 81 LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140 LV+ A+A +L ++ VR+L++G G+G + +P + VD+ + A +N Sbjct: 175 LVEEAIARTL---DRNAPVRLLEVGCGSGTYVRYAAELNPRLSALAVDLQQDVADSAAAN 231 Query: 141 AVTNGVSERFDTLQSD 156 G+++R +T Q+D Sbjct: 232 MAEWGLTDRVETRQAD 247 >gi|84497365|ref|ZP_00996187.1| hypothetical protein JNB_14263 [Janibacter sp. HTCC2649] gi|84382253|gb|EAP98135.1| hypothetical protein JNB_14263 [Janibacter sp. HTCC2649] Length = 472 Score = 36.2 bits (82), Expect = 5.3, Method: Compositional matrix adjust. Identities = 26/70 (37%), Positives = 38/70 (54%), Gaps = 4/70 (5%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+LD+G TGA+ AL S V VD S +AL+IA+ T+G+S + Sbjct: 323 RVLDIGCSTGALTTALAGRSGAV--VAVDASARALDIARCGR-THGIS-WVQGVAPHVLR 378 Query: 160 SVEGLFDVIV 169 +EG FD++V Sbjct: 379 DIEGTFDLVV 388 >gi|260426046|ref|ZP_05780025.1| conserved hypothetical protein [Citreicella sp. SE45] gi|260420538|gb|EEX13789.1| conserved hypothetical protein [Citreicella sp. SE45] Length = 366 Score = 36.2 bits (82), Expect = 5.4, Method: Compositional matrix adjust. Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 6/55 (10%) Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPP 173 + VD S AL +A+ A G ++RF Q D FS+++ L F V++ +PP Sbjct: 219 LAVDGSAPALALAEEGARRMGAADRFAIRQGDAFSTLDALGQENARFGVVICDPP 273 >gi|195124780|ref|XP_002006865.1| GI18358 [Drosophila mojavensis] gi|193911933|gb|EDW10800.1| GI18358 [Drosophila mojavensis] Length = 217 Score = 36.2 bits (82), Expect = 5.4, Method: Compositional matrix adjust. Identities = 19/42 (45%), Positives = 25/42 (59%), Gaps = 1/42 (2%) Query: 96 RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137 + R+LDLG G G +AL E F + GVD S KA+E+A Sbjct: 56 KKTARVLDLGCGNGMFLIALANEG-FARLTGVDYSPKAIELA 96 >gi|309804713|ref|ZP_07698778.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Lactobacillus iners LactinV 09V1-c] gi|309808903|ref|ZP_07702784.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Lactobacillus iners LactinV 01V1-a] gi|325911406|ref|ZP_08173818.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Lactobacillus iners UPII 143-D] gi|308166105|gb|EFO68323.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Lactobacillus iners LactinV 09V1-c] gi|308167901|gb|EFO70038.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Lactobacillus iners LactinV 01V1-a] gi|325476756|gb|EGC79910.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Lactobacillus iners UPII 143-D] Length = 449 Score = 36.2 bits (82), Expect = 5.4, Method: Compositional matrix adjust. Identities = 31/95 (32%), Positives = 49/95 (51%), Gaps = 13/95 (13%) Query: 86 LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145 LA ++ DVV +D +G G + L++ K K +GV+I A++ AK NA+ NG Sbjct: 291 LAIQKAQLTSDDVV--IDAYSGIGTIGLSVAKHVK--KVLGVEIVRDAVKDAKKNAILNG 346 Query: 146 VSE------RFDTLQSDWFSSVEGL-FDVIVSNPP 173 ++ + + L W + EGL DVI +PP Sbjct: 347 INNAEYFEGKAEELMPQWAN--EGLKTDVIFVDPP 379 >gi|304404178|ref|ZP_07385840.1| Methyltransferase type 11 [Paenibacillus curdlanolyticus YK9] gi|304347156|gb|EFM12988.1| Methyltransferase type 11 [Paenibacillus curdlanolyticus YK9] Length = 764 Score = 36.2 bits (82), Expect = 5.4, Method: Compositional matrix adjust. Identities = 34/117 (29%), Positives = 50/117 (42%), Gaps = 7/117 (5%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 +R+L++G G G LAL P G + + +A IA++ VT S R D DW Sbjct: 265 LRVLEVGCGCGGTLLALKYRCPSAVLFGAERNEQARGIAEAVGVTMFSSGRPD----DWQ 320 Query: 159 SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR---TIADG 212 +G DVI+ + + + L +R P L G YR +ADG Sbjct: 321 LIEDGTLDVILIGEAHAYTAVPTQLTRMIRKLRPGGWLVAGFMNAKFYRYANRLADG 377 >gi|284050233|ref|ZP_06380443.1| methyltransferase, UbiE/COQ5 family protein [Arthrospira platensis str. Paraca] gi|291566565|dbj|BAI88837.1| putative methyltransferase [Arthrospira platensis NIES-39] Length = 203 Score = 36.2 bits (82), Expect = 5.4, Method: Compositional matrix adjust. Identities = 32/119 (26%), Positives = 54/119 (45%), Gaps = 17/119 (14%) Query: 94 EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153 E + ILD+G GTG + L K+ P +G G D+S + ++ AK+ N +R L Sbjct: 41 EFPNSANILDIGCGTGRLLQRLAKQFPDLEGTGFDLSPQMIKEAKNK---NIYGDRLQFL 97 Query: 154 QSDWFSSVEGL------FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206 Q + VE L FD + ++ + + E++ R+ GG+ L+ Y Sbjct: 98 QGN----VEALPFPESSFDAVFCTISFLHYPHPELVLAEIK----RVLRPGGVFYLADY 148 >gi|226438391|pdb|3GRZ|A Chain A, Crystal Structure Of Ribosomal Protein L11 Methylase From Lactobacillus Delbrueckii Subsp. Bulgaricus gi|226438392|pdb|3GRZ|B Chain B, Crystal Structure Of Ribosomal Protein L11 Methylase From Lactobacillus Delbrueckii Subsp. Bulgaricus Length = 205 Score = 36.2 bits (82), Expect = 5.4, Method: Compositional matrix adjust. Identities = 24/74 (32%), Positives = 42/74 (56%), Gaps = 4/74 (5%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 + + D+GTG+G + +A K K V DIS +++ A+ NA NG+ + ++ Sbjct: 62 LTVADVGTGSGILAIAAHKLGA--KSVLATDISDESMTAAEENAALNGIYD-IALQKTSL 118 Query: 158 FSSVEGLFDVIVSN 171 + V+G FD+IV+N Sbjct: 119 LADVDGKFDLIVAN 132 >gi|145637282|ref|ZP_01792943.1| ribosomal protein L11 methyltransferase [Haemophilus influenzae PittHH] gi|145640648|ref|ZP_01796231.1| ribosomal protein L11 methyltransferase [Haemophilus influenzae R3021] gi|145269534|gb|EDK09476.1| ribosomal protein L11 methyltransferase [Haemophilus influenzae PittHH] gi|145274574|gb|EDK14437.1| ribosomal protein L11 methyltransferase [Haemophilus influenzae 22.4-21] Length = 295 Score = 36.2 bits (82), Expect = 5.4, Method: Compositional matrix adjust. Identities = 24/71 (33%), Positives = 41/71 (57%), Gaps = 2/71 (2%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 ++D G G+G + +A LK VG+DI +A+ +++NA NGV++R S+ S Sbjct: 162 VIDFGCGSGILAIAALKLGAK-SAVGIDIDPQAILASRNNAEQNGVADRLQLFLSNEKPS 220 Query: 161 VEGLFDVIVSN 171 + DV+V+N Sbjct: 221 -DLKADVVVAN 230 >gi|90019953|ref|YP_525780.1| putative SAM-dependent methyltransferase [Saccharophagus degradans 2-40] gi|123396751|sp|Q21P11|RLMF_SACD2 RecName: Full=Ribosomal RNA large subunit methyltransferase F; AltName: Full=23S rRNA mA1618 methyltransferase; AltName: Full=rRNA adenine N-6-methyltransferase gi|89949553|gb|ABD79568.1| protein of unknown function DUF890 [Saccharophagus degradans 2-40] Length = 320 Score = 36.2 bits (82), Expect = 5.4, Method: Compositional matrix adjust. Identities = 25/89 (28%), Positives = 44/89 (49%), Gaps = 8/89 (8%) Query: 97 DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE-----IAKSNAVTNGVSERFD 151 + V++LD+GTG + L ++ VG DI+ ++L +A + + +S R Sbjct: 120 NAVKMLDVGTGANGIYTLLACAVYGWRCVGSDINSESLANVKAVLANNPTLNANISLRLQ 179 Query: 152 TLQSDWFSSV---EGLFDVIVSNPPYIES 177 + +FS + + FDV V NPP+ S Sbjct: 180 PNKDAFFSQIIQTDDYFDVSVCNPPFHAS 208 >gi|325479656|gb|EGC82748.1| hypothetical protein HMPREF9290_0077 [Anaerococcus prevotii ACS-065-V-Col13] Length = 376 Score = 35.8 bits (81), Expect = 5.5, Method: Compositional matrix adjust. Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 2/52 (3%) Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPY 174 +G DIS +A+ +AK+NA+ GV E ++ D S + +++SNPPY Sbjct: 254 LGSDISGRAISLAKNNALNAGVEEDIAFVKRDVSSLAISRDDYGILISNPPY 305 >gi|210621882|ref|ZP_03292879.1| hypothetical protein CLOHIR_00824 [Clostridium hiranonis DSM 13275] gi|210154513|gb|EEA85519.1| hypothetical protein CLOHIR_00824 [Clostridium hiranonis DSM 13275] Length = 248 Score = 35.8 bits (81), Expect = 5.5, Method: Compositional matrix adjust. Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 2/56 (3%) Query: 92 RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147 + E +V IL+L GTG + + L K+ + G+DIS + LE+A A GV Sbjct: 32 KSEGAEVQNILELACGTGNLTIPLTKKG--YDIAGIDISAEMLEVAMEKAEEEGVQ 85 >gi|113476020|ref|YP_722081.1| type 11 methyltransferase [Trichodesmium erythraeum IMS101] gi|110167068|gb|ABG51608.1| Methyltransferase type 11 [Trichodesmium erythraeum IMS101] Length = 439 Score = 35.8 bits (81), Expect = 5.5, Method: Compositional matrix adjust. Identities = 24/69 (34%), Positives = 36/69 (52%), Gaps = 1/69 (1%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV-SERFDTLQSDWFS 159 ILD G+G L L + +P K VG+DIS K++E+A+ +G + F L + Sbjct: 61 ILDAACGSGYKSLVLAEANPGAKIVGIDISEKSVELARQRLQYHGFDNAEFHVLSIEELP 120 Query: 160 SVEGLFDVI 168 S+ FD I Sbjct: 121 SLGLKFDYI 129 >gi|300725122|ref|YP_003714450.1| N-methyl-transferase [Xenorhabdus nematophila ATCC 19061] gi|297631667|emb|CBJ92380.1| N-methyl-transferase [Xenorhabdus nematophila ATCC 19061] Length = 234 Score = 35.8 bits (81), Expect = 5.5, Method: Compositional matrix adjust. Identities = 34/126 (26%), Positives = 56/126 (44%), Gaps = 14/126 (11%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+L++G G+G + + + V +DI+ A+ NA+ +GV + SD FS Sbjct: 69 RMLEVGCGSGVISVTAALNG-VSEVVALDINPNAVTNTLRNAIRHGVETKVSARVSDVFS 127 Query: 160 SVEGL--FDVIVSNPP--YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215 ++E FD+I N P Y++ L FDP + R + G S Sbjct: 128 ALEMTEDFDLIFWNVPWTYVDGDFDMASELHAAVFDPE---------YAGQRRLIQGASA 178 Query: 216 HLNKDG 221 +L K+G Sbjct: 179 YLRKNG 184 >gi|297156192|gb|ADI05904.1| UbiE family methyltransferase [Streptomyces bingchenggensis BCW-1] Length = 280 Score = 35.8 bits (81), Expect = 5.5, Method: Compositional matrix adjust. Identities = 20/49 (40%), Positives = 28/49 (57%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147 +RILD+G G G + L + P + +GVD + LE A+S A GVS Sbjct: 51 MRILDIGCGPGTITADLAELVPQGEVIGVDTAPDVLEQARSVAAERGVS 99 >gi|295698692|ref|YP_003603347.1| hypothetical adenine-specific methylase YfcB [Candidatus Riesia pediculicola USDA] gi|291157413|gb|ADD79858.1| hypothetical adenine-specific methylase YfcB [Candidatus Riesia pediculicola USDA] Length = 188 Score = 35.8 bits (81), Expect = 5.5, Method: Compositional matrix adjust. Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 10/93 (10%) Query: 60 FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119 F L + F PR L+D+ S+ +E + +ILDL TG+G + ++ + Sbjct: 101 FCEHELYVDERVFIPRSPISELIDNNFE-SIINVEPK---KILDLCTGSGCIAISC---A 153 Query: 120 PFFKGVGV---DISCKALEIAKSNAVTNGVSER 149 FK + DIS +ALE+A+ N + +SER Sbjct: 154 HIFKNSEIEASDISREALEVARKNIELHSLSER 186 >gi|331091196|ref|ZP_08340037.1| RsmD family RNA methyltransferase [Lachnospiraceae bacterium 2_1_46FAA] gi|330404643|gb|EGG84182.1| RsmD family RNA methyltransferase [Lachnospiraceae bacterium 2_1_46FAA] Length = 189 Score = 35.8 bits (81), Expect = 5.6, Method: Compositional matrix adjust. Identities = 31/117 (26%), Positives = 56/117 (47%), Gaps = 10/117 (8%) Query: 64 RLTLSS-DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 RL L + D E RP T+ + ++ P + LDL +G+G + + L Sbjct: 10 RLQLKTLDGLETRPTTDRIKETLFNMISPYLCD---CMFLDLFSGSGGIGIEALSRGAK- 65 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-----FDVIVSNPPY 174 + V V+ + KA++ K N + ++ T+Q+D ++++ L FD I +PPY Sbjct: 66 EAVFVENNPKAMQYIKENLAFTKLDKKAVTMQTDVITALKRLEGTTQFDYIFMDPPY 122 >gi|320100238|ref|YP_004175830.1| methyltransferase small [Desulfurococcus mucosus DSM 2162] gi|319752590|gb|ADV64348.1| methyltransferase small [Desulfurococcus mucosus DSM 2162] Length = 217 Score = 35.8 bits (81), Expect = 5.6, Method: Compositional matrix adjust. Identities = 51/191 (26%), Positives = 77/191 (40%), Gaps = 22/191 (11%) Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 ++L D + P D+ LA L K +DLG G+G + L L + Sbjct: 1 MKLVFVGDVYRPSD------DTWLALKLLDSLKPKAGLCVDLGCGSGILGLYGLIKGYCE 54 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182 + V VDI AL N N R + SD + + G D++++NPPY+ + Sbjct: 55 RTVFVDIDEDALATTLRNIPLNNAQARSIVVSSD-NAVLHGAADLVLANPPYLPAA---- 109 Query: 183 LGLEVRDFDPRISLDGGIDGLS---HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 E + D + +GG+ G H+ +A V L GL + VV Sbjct: 110 ---EGKVLDA--ATEGGVHGYEAVLHFINVAHEV---LRPGGLLILVYSSLSNQLVVEEH 161 Query: 240 ESRKLFLVNAF 250 SRK F + AF Sbjct: 162 LSRKGFTMVAF 172 >gi|308803496|ref|XP_003079061.1| ribosomal protein L11 methyltransferase (ISS) [Ostreococcus tauri] gi|116057515|emb|CAL51942.1| ribosomal protein L11 methyltransferase (ISS) [Ostreococcus tauri] Length = 811 Score = 35.8 bits (81), Expect = 5.6, Method: Composition-based stats. Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 7/76 (9%) Query: 101 ILDLGTGTGAVCL-ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++D G G+G + + ALL + + VGVD++ +A++ + NA NGV R T D Sbjct: 670 VVDFGCGSGVLAIGALLLGAE--RAVGVDLARQAVQSSMDNAKLNGVEHRLSTFLGDGTD 727 Query: 160 ----SVEGLFDVIVSN 171 G DV+++N Sbjct: 728 PGTPGANGQADVVIAN 743 >gi|109946712|ref|YP_663940.1| hypothetical protein Hac_0080 [Helicobacter acinonychis str. Sheeba] gi|109713933|emb|CAJ98941.1| conserved hypothetical protein [Helicobacter acinonychis str. Sheeba] Length = 238 Score = 35.8 bits (81), Expect = 5.6, Method: Compositional matrix adjust. Identities = 25/87 (28%), Positives = 45/87 (51%), Gaps = 4/87 (4%) Query: 88 FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147 FS P I+ ILD+G+G G + L +++P V+ K ++ NA+ + Sbjct: 27 FSCPLIKNSGA--ILDIGSGCGILGLLCARDNPLASVHLVEKDSKMAFCSQKNALKFPNT 84 Query: 148 ERFDTLQSDWFSSVEGLFDVIVSNPPY 174 + F++ D+ + L+DV+V NPP+ Sbjct: 85 QVFESNFLDFNPPI--LYDVVVCNPPF 109 >gi|66356834|ref|XP_625595.1| conserved methylase [Cryptosporidium parvum Iowa II] gi|46226592|gb|EAK87580.1| conserved methylase [Cryptosporidium parvum Iowa II] gi|323508673|dbj|BAJ77230.1| cgd5_4330 [Cryptosporidium parvum] gi|323509801|dbj|BAJ77793.1| cgd5_4330 [Cryptosporidium parvum] Length = 227 Score = 35.8 bits (81), Expect = 5.6, Method: Compositional matrix adjust. Identities = 22/83 (26%), Positives = 39/83 (46%), Gaps = 1/83 (1%) Query: 57 WRDFYNVRLTLSSDT-FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL 115 W +FY L +D + E +D+ + + + + R+LD+G G G + L Sbjct: 17 WEEFYENELDSYNDVGYRGEEWFEDYIDAIVDWVMETGCEVQSGRVLDIGCGNGLFLIDL 76 Query: 116 LKESPFFKGVGVDISCKALEIAK 138 ++ F VG+D A+E+AK Sbjct: 77 IRNINFSSAVGIDYIPSAIELAK 99 >gi|290476761|ref|YP_003469672.1| methylation of 50S ribosomal subunit protein L11 [Xenorhabdus bovienii SS-2004] gi|289176105|emb|CBJ82910.1| methylation of 50S ribosomal subunit protein L11 [Xenorhabdus bovienii SS-2004] Length = 293 Score = 35.8 bits (81), Expect = 5.6, Method: Compositional matrix adjust. Identities = 42/164 (25%), Positives = 74/164 (45%), Gaps = 29/164 (17%) Query: 74 PRPET-ELLVDSALAFS----------LPRIEKRDVV--RILDLGTGTGAVCLALLKESP 120 P P+ +++D LAF L ++ D+ ++D G G+G + +A LK Sbjct: 122 PEPDAVNVMLDPGLAFGTGTHPTTSLCLQWLDGLDLTGKTVIDFGCGSGILAIAALKLG- 180 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180 + +G+DI +A++ ++ NA NGVS + TL + D++++N Sbjct: 181 AKQAIGIDIDPQAIQASRDNAERNGVSAQL-TLYLSKNQPADLKCDIVIAN--------- 230 Query: 181 DCLGLEVRDFDPRIS---LDGGIDGLSH-YRTIADGVSRHLNKD 220 L +R+ P I GG GLS + A+GV + N + Sbjct: 231 -ILAGPLRELAPIIGSLPKSGGFLGLSGVLASQAEGVVQAYNNE 273 >gi|268323570|emb|CBH37158.1| hypothetical protein, containing methyltransferase domain [uncultured archaeon] Length = 225 Score = 35.8 bits (81), Expect = 5.6, Method: Compositional matrix adjust. Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 8/76 (10%) Query: 101 ILDLGTGTGAVCLA--LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 + DLG G G + + LL + VG+D +A+E+A++N+ GV+ F Sbjct: 79 VYDLGCGNGILGIGAKLLGAK---EVVGIDSDLRAIEVARANSERIGVAVEFKRCDV--- 132 Query: 159 SSVEGLFDVIVSNPPY 174 VEG D +V NPP+ Sbjct: 133 RDVEGTGDTVVMNPPF 148 >gi|94499206|ref|ZP_01305744.1| hypothetical protein RED65_10469 [Oceanobacter sp. RED65] gi|94428838|gb|EAT13810.1| hypothetical protein RED65_10469 [Oceanobacter sp. RED65] Length = 315 Score = 35.8 bits (81), Expect = 5.6, Method: Compositional matrix adjust. Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 8/88 (9%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE-----IAKSNAVTNGVSERFDTL 153 V LD+GTG + L +K V DI K+++ I + A++N + R T Sbjct: 106 VTALDIGTGASCIYSLLGNRIYDWKMVASDIDPKSIDNANAIIKANQALSNQIDCRLQTS 165 Query: 154 QSDWFSSV---EGLFDVIVSNPPYIESV 178 + F ++ + FD+ + NPP+ ES+ Sbjct: 166 EKYIFRNIIHNDEYFDITLCNPPFHESI 193 >gi|288800827|ref|ZP_06406284.1| RNA methyltransferase, RsmD family [Prevotella sp. oral taxon 299 str. F0039] gi|288332288|gb|EFC70769.1| RNA methyltransferase, RsmD family [Prevotella sp. oral taxon 299 str. F0039] Length = 181 Score = 35.8 bits (81), Expect = 5.7, Method: Compositional matrix adjust. Identities = 43/180 (23%), Positives = 77/180 (42%), Gaps = 35/180 (19%) Query: 71 TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL-KESPFFKGVGVDI 129 TF+ RP T+ ++ I+ D R LDL GTG++ + LL +E+ + G+ +D Sbjct: 18 TFKARPTTDFAKENIFNVLNGYIDFEDC-RALDLFAGTGSISIELLSREAQYVVGLELDR 76 Query: 130 -SCKALEIAKSNAVTNGVSERFDTLQSDWF---SSVEGLFDVIVSNPPYIESVIVDCLGL 185 C + + ++ + ++ D F S FD+I ++PPY L Sbjct: 77 DHCTFIR----QCIDKLGADNYSLIRGDVFRYLKSCRETFDLIFADPPY---------AL 123 Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245 + + P+I LD GI L++DG+ +E G + + F R+ + Sbjct: 124 KNLEEIPQIVLDKGI----------------LSEDGIFVLEHGKHNNFEQHPCFLERRAY 167 >gi|163748711|ref|ZP_02155964.1| ribosomal protein L11 methyltransferase [Shewanella benthica KT99] gi|161331821|gb|EDQ02625.1| ribosomal protein L11 methyltransferase [Shewanella benthica KT99] Length = 293 Score = 35.8 bits (81), Expect = 5.7, Method: Compositional matrix adjust. Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 1/51 (1%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150 ++D G G+G + +A LK K G+DI +A+E +K+NA N V +R Sbjct: 161 EVIDFGCGSGILAVAALKLGAK-KVTGIDIDYQAIEASKANAERNDVQDRL 210 >gi|86749135|ref|YP_485631.1| ribosomal L11 methyltransferase [Rhodopseudomonas palustris HaA2] gi|86572163|gb|ABD06720.1| LSU ribosomal protein L11P methyltransferase [Rhodopseudomonas palustris HaA2] Length = 296 Score = 35.8 bits (81), Expect = 5.7, Method: Compositional matrix adjust. Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 9/77 (11%) Query: 101 ILDLGTGTGAVCLALLK--ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 +LDLGTGTG + +A K P DI +++ +A+ NA NGV + F Sbjct: 158 VLDLGTGTGVLAIAAAKALRQPVLA---TDIDRQSVAVARENARLNGVGNLVHAEWATGF 214 Query: 159 SS----VEGLFDVIVSN 171 +S FD++++N Sbjct: 215 ASPAFAAHAPFDLVLAN 231 >gi|330503669|ref|YP_004380538.1| pcaF-2 [Pseudomonas mendocina NK-01] gi|328917955|gb|AEB58786.1| pcaF-2 [Pseudomonas mendocina NK-01] Length = 401 Score = 35.8 bits (81), Expect = 5.7, Method: Compositional matrix adjust. Identities = 22/81 (27%), Positives = 36/81 (44%), Gaps = 9/81 (11%) Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSH---------YRTIADGVSR 215 DVI N + I C L ++D DPR++ +GG + H T + + R Sbjct: 317 MDVIEFNEAFASQAIAVCRRLGLQDDDPRVNPNGGAIAIGHPLGASGARLVTTALNQLER 376 Query: 216 HLNKDGLCSVEIGYNQKVDVV 236 + LCS+ +G Q V ++ Sbjct: 377 QQGRYALCSMCVGVGQGVALI 397 >gi|307103327|gb|EFN51588.1| hypothetical protein CHLNCDRAFT_59200 [Chlorella variabilis] Length = 437 Score = 35.8 bits (81), Expect = 5.7, Method: Compositional matrix adjust. Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 1/56 (1%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154 V ++D G G+G + +A L VG DI A++ ++NA NGV+ER Q Sbjct: 236 VSVMDYGAGSGVLAVAALLMG-AAHAVGTDIEPLAVKSTQANAALNGVAERLAAYQ 290 >gi|301616799|ref|XP_002937838.1| PREDICTED: methyltransferase-like protein 10-like [Xenopus (Silurana) tropicalis] Length = 220 Score = 35.8 bits (81), Expect = 5.7, Method: Compositional matrix adjust. Identities = 21/51 (41%), Positives = 29/51 (56%), Gaps = 1/51 (1%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148 ILD+GTG G + + L K S + G+D S A+E+AKS GVS+ Sbjct: 60 TASILDIGTGNGMLLVELAK-SGYCNLTGIDYSSDAVELAKSICEKEGVSQ 109 >gi|157148837|ref|YP_001456156.1| ribosomal protein L11 methyltransferase [Citrobacter koseri ATCC BAA-895] gi|166223406|sp|A8AQF7|PRMA_CITK8 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11 Mtase gi|157086042|gb|ABV15720.1| hypothetical protein CKO_04670 [Citrobacter koseri ATCC BAA-895] Length = 293 Score = 35.8 bits (81), Expect = 5.7, Method: Compositional matrix adjust. Identities = 35/108 (32%), Positives = 58/108 (53%), Gaps = 17/108 (15%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159 ++D G G+G + +A LK K +G+DI +A++ ++ NA NGVSER + L D Sbjct: 162 VIDFGCGSGILAIAALKLG-AAKAIGIDIDPQAIQASRDNAERNGVSERLELYLPKDQPE 220 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS---LDGGIDGLS 204 +++ DV+V+N L +R+ P IS ++ G+ GLS Sbjct: 221 AMKA--DVVVAN----------ILAGPLRELAPLISVLPVESGLLGLS 256 >gi|86130776|ref|ZP_01049375.1| methyltransferase [Dokdonia donghaensis MED134] gi|85818187|gb|EAQ39347.1| methyltransferase [Dokdonia donghaensis MED134] Length = 272 Score = 35.8 bits (81), Expect = 5.7, Method: Compositional matrix adjust. Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 3/77 (3%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS---DW 157 ILD+GTGTG + L L + V++ A E A N + +R + ++ Sbjct: 42 ILDIGTGTGVIALMLAQRCDAQTIDAVELDDNAYEQATENFENSDWGDRLFCYHAHLYEF 101 Query: 158 FSSVEGLFDVIVSNPPY 174 + V+ +D+IV NPP+ Sbjct: 102 AAEVDDEYDLIVCNPPF 118 >gi|329934279|ref|ZP_08284358.1| O-methyltransferase [Streptomyces griseoaurantiacus M045] gi|329305875|gb|EGG49730.1| O-methyltransferase [Streptomyces griseoaurantiacus M045] Length = 346 Score = 35.8 bits (81), Expect = 5.8, Method: Compositional matrix adjust. Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 1/64 (1%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 V ++D+G G + LAL++ P +G +D+ A+E A A G+S+RF D+ Sbjct: 181 VSTVIDVGGADGHLVLALMEARPELRGQVLDLP-HAVEGAVEEAARRGLSDRFSGAAGDF 239 Query: 158 FSSV 161 F+ V Sbjct: 240 FAEV 243 >gi|310778972|ref|YP_003967305.1| 23S rRNA m(6)A-1618 methyltransferase [Ilyobacter polytropus DSM 2926] gi|309748295|gb|ADO82957.1| 23S rRNA m(6)A-1618 methyltransferase [Ilyobacter polytropus DSM 2926] Length = 299 Score = 35.8 bits (81), Expect = 5.8, Method: Compositional matrix adjust. Identities = 28/92 (30%), Positives = 47/92 (51%), Gaps = 8/92 (8%) Query: 95 KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-- 152 KR V++LD+GTG + + +S + V +I K++E AK +N V + T Sbjct: 99 KRKGVKVLDIGTGANCIYPIIGSQSYNWDFVASEIDPKSIENAKKIVNSNKVLKNKITLK 158 Query: 153 LQSDWFSSVEGL------FDVIVSNPPYIESV 178 LQ + + EG+ FD+ + NPP+ S+ Sbjct: 159 LQKNRENIFEGIIEKNDKFDLTMCNPPFHASL 190 >gi|195576207|ref|XP_002077968.1| GD22788 [Drosophila simulans] gi|194189977|gb|EDX03553.1| GD22788 [Drosophila simulans] Length = 219 Score = 35.8 bits (81), Expect = 5.8, Method: Compositional matrix adjust. Identities = 20/52 (38%), Positives = 29/52 (55%) Query: 96 RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147 ++ R+LDLG G G + L E GVD S KA+E+A++ A N +S Sbjct: 58 KEASRVLDLGCGNGMFLVGLANEGFTGDLTGVDYSPKAVELAQNIAQDNKLS 109 >gi|170291070|ref|YP_001737886.1| putative RNA methylase [Candidatus Korarchaeum cryptofilum OPF8] gi|170175150|gb|ACB08203.1| putative RNA methylase [Candidatus Korarchaeum cryptofilum OPF8] Length = 307 Score = 35.8 bits (81), Expect = 5.8, Method: Compositional matrix adjust. Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 3/75 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LD G G + L +L S + +GVDI+ K + AK+N +T G E ++ D S Sbjct: 161 VLDPFLGVGGIALEIL--SVGARLIGVDINEKLVIQAKNNLMTYGFLEGYELRVGDALSL 218 Query: 161 VEGL-FDVIVSNPPY 174 G+ D IV++PPY Sbjct: 219 ELGVRVDRIVTDPPY 233 >gi|82749813|ref|YP_415554.1| hypothetical protein SAB0036 [Staphylococcus aureus RF122] gi|82655344|emb|CAI79724.1| hypothetical protein SAB0036 [Staphylococcus aureus RF122] Length = 243 Score = 35.8 bits (81), Expect = 5.8, Method: Compositional matrix adjust. Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 3/81 (3%) Query: 90 LPRIEKRDVVRILDLGTGTGAVCLALLKE-SPFFKGVGVDISCKALEIAKSNAVTNGVSE 148 L R + + +R+LD+G TG V + K + VGVD++ L+IA N N VS Sbjct: 12 LDRAQIEEGMRVLDIGCATGEVTQLIAKRVGANGEVVGVDVNESLLKIANENNQYNNVSY 71 Query: 149 RFDTLQSDWFSSVEGLFDVIV 169 ++ + G FD IV Sbjct: 72 QYSDIYQ--LPETMGHFDAIV 90 >gi|15807395|ref|NP_296126.1| ubiquinone/menaquinone biosynthesis methyltransferase [Deinococcus radiodurans R1] gi|41019470|sp|Q9RRT0|UBIE_DEIRA RecName: Full=Menaquinone biosynthesis methyltransferase ubiE gi|6460221|gb|AAF11949.1|AE002071_3 ubiquinone/menaquinone biosynthesis methyltransferase [Deinococcus radiodurans R1] Length = 241 Score = 35.8 bits (81), Expect = 5.8, Method: Compositional matrix adjust. Identities = 18/52 (34%), Positives = 30/52 (57%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151 R+LD+ TGTG + L + +P + VG D + L++A+ A +S RF+ Sbjct: 60 RVLDVATGTGDFAIELKERAPQVEIVGSDFVPQMLDLARQKAGAKQLSIRFE 111 >gi|329848573|ref|ZP_08263601.1| methyltransferase small domain protein [Asticcacaulis biprosthecum C19] gi|328843636|gb|EGF93205.1| methyltransferase small domain protein [Asticcacaulis biprosthecum C19] Length = 229 Score = 35.8 bits (81), Expect = 5.8, Method: Compositional matrix adjust. Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 5/81 (6%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 + L+LG G G L+L P G++ +A+ NA NG +E ++ D + Sbjct: 28 KALELGCGAGGAILSLKARCPDLALTGIEREPVYAGLARENAALNGNAE-VTVIEGDIGA 86 Query: 160 SVE--GL--FDVIVSNPPYIE 176 + GL FD++ SNPP+ + Sbjct: 87 GFKTFGLDRFDLVFSNPPFFD 107 >gi|315225236|ref|ZP_07867053.1| SAM-dependent methyltransferase [Capnocytophaga ochracea F0287] gi|314944919|gb|EFS96951.1| SAM-dependent methyltransferase [Capnocytophaga ochracea F0287] Length = 240 Score = 35.8 bits (81), Expect = 5.8, Method: Compositional matrix adjust. Identities = 38/148 (25%), Positives = 68/148 (45%), Gaps = 12/148 (8%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER---FDTLQSDW 157 ILD+G GTG + L L + S V+I KA N + +R + ++ Sbjct: 38 ILDIGAGTGLLSLMLAQRSDAVVIDAVEIDEKAYIECTENFEESQWGDRLFCYHASFQEF 97 Query: 158 FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217 ++ ++D+I+SNPP+ + D E R + D LS + + +GVS+ L Sbjct: 98 ALEIDEVYDLIISNPPFYTA---DYKTAEKARNTARFT-----DTLS-FSELLEGVSQLL 148 Query: 218 NKDGLCSVEIGYNQKVDVVRIFESRKLF 245 + +G+ SV + Y++ + + LF Sbjct: 149 SDEGVFSVILPYSETEGFIALASGYGLF 176 >gi|313678340|ref|YP_004056080.1| type I restriction-modification system, M subunit [Mycoplasma bovis PG45] gi|312950090|gb|ADR24685.1| type I restriction-modification system, M subunit [Mycoplasma bovis PG45] Length = 892 Score = 35.8 bits (81), Expect = 5.8, Method: Composition-based stats. Identities = 32/128 (25%), Positives = 59/128 (46%), Gaps = 25/128 (19%) Query: 68 SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 + + + P +EL+ +A+ L + R+V+++ D +G+G++ + + E + Sbjct: 210 AGEFYTPHKVSELM-SKIIAYHL---KDREVIKVYDPTSGSGSLLITIGHEFKKYNNGDS 265 Query: 128 DISCKALEI-------AKSNAVTNGVS------ERFDTLQSDW-------FSSVEGL-FD 166 +S A E+ + N + +S DTL+ DW FSS + L D Sbjct: 266 PVSYYAQELKAEVFNLTRMNLIMKNISPTEIHARNGDTLEQDWPMFEDNDFSSYKHLSVD 325 Query: 167 VIVSNPPY 174 +VSNPPY Sbjct: 326 AVVSNPPY 333 >gi|68249563|ref|YP_248675.1| ribosomal protein L11 methyltransferase [Haemophilus influenzae 86-028NP] gi|81336008|sp|Q4QLT2|PRMA_HAEI8 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11 Mtase gi|68057762|gb|AAX88015.1| ribosomal protein L11 methyltransferase [Haemophilus influenzae 86-028NP] Length = 295 Score = 35.8 bits (81), Expect = 5.8, Method: Compositional matrix adjust. Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 2/71 (2%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 ++D G G+G + +A LK VG+DI +A+ ++ NA NGV +R SD S Sbjct: 162 VIDFGCGSGILAIAALKLGAK-SAVGIDIDPQAILASRDNAEQNGVVDRLQLFLSDEKPS 220 Query: 161 VEGLFDVIVSN 171 + DV+V+N Sbjct: 221 -DLKADVVVAN 230 >gi|152976525|ref|YP_001376042.1| biotin biosynthesis protein BioC [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152025277|gb|ABS23047.1| biotin biosynthesis protein BioC [Bacillus cytotoxicus NVH 391-98] Length = 285 Score = 35.8 bits (81), Expect = 5.8, Method: Compositional matrix adjust. Identities = 24/89 (26%), Positives = 45/89 (50%), Gaps = 7/89 (7%) Query: 90 LPRIEKR----DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145 L ++EKR +RIL+LG GTG + L+ P + +D + + +AK + Sbjct: 33 LSQLEKRYSKAAAIRILELGCGTGYITEKLVHLFPNAQITAIDFAESMIAVAKQRRHVDE 92 Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSNPPY 174 V+ R + ++ ++ +DVI+SN + Sbjct: 93 VTFRCEDIEK---LILDDFYDVIISNATF 118 >gi|323440388|gb|EGA98101.1| hypothetical protein SAO11_0832 [Staphylococcus aureus O11] Length = 243 Score = 35.8 bits (81), Expect = 5.9, Method: Compositional matrix adjust. Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 3/81 (3%) Query: 90 LPRIEKRDVVRILDLGTGTGAVCLALLKE-SPFFKGVGVDISCKALEIAKSNAVTNGVSE 148 L R + + +R+LD+G TG V + K + VGVD++ L+IA N N VS Sbjct: 12 LDRAQIEEGMRVLDIGCATGEVTQLIAKRVGANGEVVGVDVNESLLKIANENNQYNNVSY 71 Query: 149 RFDTLQSDWFSSVEGLFDVIV 169 ++ + G FD IV Sbjct: 72 QYSDIYQ--LPETMGHFDAIV 90 >gi|294656777|ref|XP_459095.2| DEHA2D14190p [Debaryomyces hansenii CBS767] gi|199431737|emb|CAG87263.2| DEHA2D14190p [Debaryomyces hansenii] Length = 278 Score = 35.8 bits (81), Expect = 5.9, Method: Compositional matrix adjust. Identities = 24/72 (33%), Positives = 41/72 (56%), Gaps = 3/72 (4%) Query: 77 ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA-VCLALLKESPFFKGVGVDISCKALE 135 E+ L V SL +++ +VV +DLG+G G V LA K P K +G+D+ + ++ Sbjct: 51 ESNLGVSCGNPLSLANLKEGEVV--VDLGSGGGIDVFLAAKKVGPHGKSIGIDMLKEMIK 108 Query: 136 IAKSNAVTNGVS 147 +A++NA G + Sbjct: 109 VARTNAEKGGYT 120 >gi|152982874|ref|YP_001355335.1| UbiE/COQ5 family methlytransferase [Janthinobacterium sp. Marseille] gi|151282951|gb|ABR91361.1| methlytransferase, UbiE/COQ5 family [Janthinobacterium sp. Marseille] Length = 281 Score = 35.8 bits (81), Expect = 5.9, Method: Compositional matrix adjust. Identities = 23/72 (31%), Positives = 42/72 (58%), Gaps = 1/72 (1%) Query: 100 RILDLGTGTGAVCLALLKE-SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 R+LD+G GTG+ LA+ ++ P VG+DIS + + A+++A G++ F + + Sbjct: 52 RVLDVGCGTGSTTLAVSRQLGPQGLCVGIDISQQMIAAAQASAKAQGLASGFICADAQTY 111 Query: 159 SSVEGLFDVIVS 170 + FD+I+S Sbjct: 112 AFAAASFDLIIS 123 >gi|194367355|ref|YP_002029965.1| sun protein [Stenotrophomonas maltophilia R551-3] gi|194350159|gb|ACF53282.1| sun protein [Stenotrophomonas maltophilia R551-3] Length = 443 Score = 35.8 bits (81), Expect = 5.9, Method: Compositional matrix adjust. Identities = 23/81 (28%), Positives = 35/81 (43%), Gaps = 8/81 (9%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD-- 156 R+LD G LL+ P + + +DI + L A+ + GV E TL +D Sbjct: 254 ARVLDACAAPGGKSAHLLERDPSLRLLALDIDARRLARARDTYIRTGVGEHVQTLAADAS 313 Query: 157 ----WFSSVEGLFDVIVSNPP 173 W+ V FD I+ + P Sbjct: 314 DPGSWWDGVP--FDAILLDAP 332 >gi|325662012|ref|ZP_08150631.1| hypothetical protein HMPREF0490_01369 [Lachnospiraceae bacterium 4_1_37FAA] gi|325471675|gb|EGC74894.1| hypothetical protein HMPREF0490_01369 [Lachnospiraceae bacterium 4_1_37FAA] Length = 238 Score = 35.8 bits (81), Expect = 5.9, Method: Compositional matrix adjust. Identities = 19/67 (28%), Positives = 38/67 (56%) Query: 97 DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 D + + D+GT G + +AL++E + V +DI+ L+ A+++ +SE+ DT +SD Sbjct: 17 DGMVVADIGTDHGYIPIALVQEGRCPRAVAMDINIGPLDRARAHIQAAELSEKIDTRRSD 76 Query: 157 WFSSVEG 163 ++ Sbjct: 77 GMKELKA 83 >gi|195342145|ref|XP_002037662.1| GM18180 [Drosophila sechellia] gi|194132512|gb|EDW54080.1| GM18180 [Drosophila sechellia] Length = 219 Score = 35.8 bits (81), Expect = 5.9, Method: Compositional matrix adjust. Identities = 25/79 (31%), Positives = 36/79 (45%) Query: 96 RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155 ++ R+LDLG G G + L E GVD S KA+E+A++ A N +S + Sbjct: 58 KEASRVLDLGCGNGMFLVGLANEGFTGDLTGVDYSPKAVELAQNIAQDNKLSITYKVADL 117 Query: 156 DWFSSVEGLFDVIVSNPPY 174 G FDV+ Y Sbjct: 118 TQPQDELGHFDVVHDKGTY 136 >gi|327401522|ref|YP_004342361.1| type 11 methyltransferase [Archaeoglobus veneficus SNP6] gi|327317030|gb|AEA47646.1| Methyltransferase type 11 [Archaeoglobus veneficus SNP6] Length = 252 Score = 35.8 bits (81), Expect = 6.0, Method: Compositional matrix adjust. Identities = 29/70 (41%), Positives = 38/70 (54%), Gaps = 11/70 (15%) Query: 89 SLPRIEKRDV--------VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140 SLP + RDV ++ILD+GTGTG LAL+ + VG+D+S LE+AK Sbjct: 31 SLPEVW-RDVLASVFERRMQILDVGTGTG--FLALILAELGHEVVGIDLSKGMLEVAKKK 87 Query: 141 AVTNGVSERF 150 A GV F Sbjct: 88 ARKLGVDVEF 97 >gi|288919872|ref|ZP_06414195.1| O-methyltransferase family 2 [Frankia sp. EUN1f] gi|288348704|gb|EFC82958.1| O-methyltransferase family 2 [Frankia sp. EUN1f] Length = 361 Score = 35.8 bits (81), Expect = 6.0, Method: Compositional matrix adjust. Identities = 17/61 (27%), Positives = 33/61 (54%), Gaps = 1/61 (1%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LDLG G + +L+ P +G+ VD+ + A++ A T+GV++R + + + Sbjct: 185 VLDLGAGAAPWAIGMLQVWPRARGLAVDLPSI-IPFAQAAAATHGVADRLEVRAGSYLDA 243 Query: 161 V 161 V Sbjct: 244 V 244 >gi|284048610|ref|YP_003398949.1| methyltransferase small [Acidaminococcus fermentans DSM 20731] gi|283952831|gb|ADB47634.1| methyltransferase small [Acidaminococcus fermentans DSM 20731] Length = 409 Score = 35.8 bits (81), Expect = 6.0, Method: Compositional matrix adjust. Identities = 25/80 (31%), Positives = 39/80 (48%), Gaps = 8/80 (10%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LD T TG L K VDIS +AL+ A+ N NG+ ++ T++++ F Sbjct: 237 VLDCFTHTGPFALNAAKGGAA-SVTAVDISGEALKRARDNFALNGLEDKIQTVEANVFEY 295 Query: 161 VEGL-------FDVIVSNPP 173 + L FD I+ +PP Sbjct: 296 LTDLENKKQHPFDFIILDPP 315 >gi|237730176|ref|ZP_04560657.1| ribosomal protein L11 methyltransferase [Citrobacter sp. 30_2] gi|226908782|gb|EEH94700.1| ribosomal protein L11 methyltransferase [Citrobacter sp. 30_2] Length = 293 Score = 35.8 bits (81), Expect = 6.0, Method: Compositional matrix adjust. Identities = 27/72 (37%), Positives = 44/72 (61%), Gaps = 4/72 (5%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159 ++D G G+G + +A LK K +GVDI +A++ ++ NA NGVSER + L D Sbjct: 162 VIDFGCGSGILAIAALKLG-AAKAIGVDIDPQAIQASRDNAQRNGVSERLELYLPKDQPE 220 Query: 160 SVEGLFDVIVSN 171 +++ DV+V+N Sbjct: 221 AMKA--DVVVAN 230 >gi|225405322|ref|ZP_03760511.1| hypothetical protein CLOSTASPAR_04542 [Clostridium asparagiforme DSM 15981] gi|225043146|gb|EEG53392.1| hypothetical protein CLOSTASPAR_04542 [Clostridium asparagiforme DSM 15981] Length = 428 Score = 35.8 bits (81), Expect = 6.0, Method: Compositional matrix adjust. Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 9/81 (11%) Query: 100 RILDLGTGTGAVCL-ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 R+LD T TG+ L A L + + GVD S A++ A NA NG+S+R L +D F Sbjct: 253 RVLDCFTHTGSFALNAGLAGAG--QVTGVDASQLAVDQAAENAALNGLSDRVSFLCADVF 310 Query: 159 SSVEGL------FDVIVSNPP 173 + L +DV++ +PP Sbjct: 311 DLLPKLEKDGERYDVVILDPP 331 >gi|310795101|gb|EFQ30562.1| methyltransferase domain-containing protein [Glomerella graminicola M1.001] Length = 296 Score = 35.8 bits (81), Expect = 6.0, Method: Compositional matrix adjust. Identities = 26/78 (33%), Positives = 36/78 (46%), Gaps = 8/78 (10%) Query: 80 LLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKS 139 L +D L S R + R+LDLGTGTG + P + +GVD+S E+ + Sbjct: 57 LTLDGELGTSPGRHTAK---RVLDLGTGTGIWAIDFADAHPSAEVIGVDLSAIQPELLPA 113 Query: 140 NAVTNGVSERFDTLQSDW 157 N S D L+ DW Sbjct: 114 N-----CSFEIDDLELDW 126 >gi|296411178|ref|XP_002835311.1| hypothetical protein [Tuber melanosporum Mel28] gi|295629088|emb|CAZ79468.1| unnamed protein product [Tuber melanosporum] Length = 281 Score = 35.8 bits (81), Expect = 6.0, Method: Compositional matrix adjust. Identities = 50/171 (29%), Positives = 71/171 (41%), Gaps = 15/171 (8%) Query: 61 YNVRLTLSSDTFEPRPETELLV-----DSALA-FSLPRIEKRDVVRILDLGTGTGAVCLA 114 ++ TL S F P E V D+ L S R + LD+GTG G + Sbjct: 53 WDETYTLESQNFNADPANEGHVWFSESDAELRILSFLRRIAPEARSFLDIGTGNGHLLFE 112 Query: 115 LLKESPFFKG--VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNP 172 +++E + G VGVD S A+ +A+S A GV E W + + L D V Sbjct: 113 IVEEGSWDGGLFVGVDYSDGAVALARSIAKGRGVEEGKVAF---WVADILALGDGEVEAE 169 Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGG--IDGLSHYRTIADGVSRHLNKDG 221 ++ D L+ FD ISL G DG Y A+ V R + + G Sbjct: 170 EWVPRGGFDVC-LDKGTFDA-ISLGDGRLPDGRRVYEGYAERVVRVMKRGG 218 >gi|262163831|ref|ZP_06031571.1| ribosomal protein L11 methyltransferase [Vibrio mimicus VM223] gi|262027811|gb|EEY46476.1| ribosomal protein L11 methyltransferase [Vibrio mimicus VM223] Length = 295 Score = 35.8 bits (81), Expect = 6.0, Method: Compositional matrix adjust. Identities = 24/72 (33%), Positives = 41/72 (56%), Gaps = 4/72 (5%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159 ++D G G+G + +A +K K +G+DI +AL +K NA NGV + + L D + Sbjct: 163 VIDFGCGSGILAIAAIKLG-AAKVIGIDIDPQALLASKDNAARNGVENQIEVYLPKDQPA 221 Query: 160 SVEGLFDVIVSN 171 + + DV+V+N Sbjct: 222 GL--VADVVVAN 231 >gi|325688980|gb|EGD30988.1| methyltransferase domain protein [Streptococcus sanguinis SK115] Length = 228 Score = 35.8 bits (81), Expect = 6.1, Method: Compositional matrix adjust. Identities = 28/74 (37%), Positives = 41/74 (55%), Gaps = 6/74 (8%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 V LD+G G G C+ L S +F+ V G+D+S L+IAK + V + + LQ D+ Sbjct: 40 VSALDIGCGGGNTCIFL---SSYFQHVTGIDLSADFLQIAK-DKVEKEDLQNVELLQDDF 95 Query: 158 FSSV-EGLFDVIVS 170 ++V E FD I S Sbjct: 96 LTAVFEKQFDFIFS 109 >gi|307180237|gb|EFN68270.1| Putative methyltransferase METT10D [Camponotus floridanus] Length = 763 Score = 35.8 bits (81), Expect = 6.1, Method: Compositional matrix adjust. Identities = 26/91 (28%), Positives = 50/91 (54%), Gaps = 8/91 (8%) Query: 95 KRDVVRILDLGTGTGAVCL-ALLKESPF-FKGVGVDISCKALEIAKSNAVTNGVSE--RF 150 K D+ +I + GTGA+C+ ALL + + +G ++ K++E A+ + N + + Sbjct: 329 KLDMNKITGIDIGTGAICIYALLLAKIYGYHMIGTEVDKKSIEYAEKCIIKNNLENLIKV 388 Query: 151 DTLQSD--WFSSVE--GLFDVIVSNPPYIES 177 T+ SD + +VE ++D + NPP+ E+ Sbjct: 389 VTVNSDRIFKDAVEDDKIYDFSMCNPPFFEN 419 >gi|303240654|ref|ZP_07327168.1| Methyltransferase type 12 [Acetivibrio cellulolyticus CD2] gi|302591722|gb|EFL61456.1| Methyltransferase type 12 [Acetivibrio cellulolyticus CD2] Length = 235 Score = 35.8 bits (81), Expect = 6.1, Method: Compositional matrix adjust. Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 9/90 (10%) Query: 85 ALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA--KSNAV 142 A+ +LP D ++DLG GTG + A+ P K VDIS K L+IA K N V Sbjct: 41 AIVNTLPFSRSEDF-EVIDLGCGTGTISRAVKDAYPKAKITCVDISGKMLQIAAGKLNDV 99 Query: 143 TNGVSERFDTLQSDWFSSVEG-LFDVIVSN 171 + + + SD++ G +DV+VS+ Sbjct: 100 QDAI-----YINSDFYEFNFGRKYDVVVSS 124 >gi|260914497|ref|ZP_05920966.1| ribosomal protein L11 methyltransferase [Pasteurella dagmatis ATCC 43325] gi|260631598|gb|EEX49780.1| ribosomal protein L11 methyltransferase [Pasteurella dagmatis ATCC 43325] Length = 293 Score = 35.8 bits (81), Expect = 6.1, Method: Compositional matrix adjust. Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 4/72 (5%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159 ++D G G+G + +A LK VG+DI +A+ +++NA NGV+++ L +D Sbjct: 162 VIDFGCGSGILAIAALKLGAK-SAVGIDIDPQAILASRNNAEQNGVADKLQLFLSAD--K 218 Query: 160 SVEGLFDVIVSN 171 V+ DV+V+N Sbjct: 219 PVDLKADVVVAN 230 >gi|171779403|ref|ZP_02920367.1| hypothetical protein STRINF_01248 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171282020|gb|EDT47451.1| hypothetical protein STRINF_01248 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 850 Score = 35.8 bits (81), Expect = 6.1, Method: Composition-based stats. Identities = 32/123 (26%), Positives = 58/123 (47%), Gaps = 25/123 (20%) Query: 77 ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136 E LL+ +A ++ R+ ++I D +G+G++ + + K + + +I A E+ Sbjct: 192 EVSLLMSEIVA---EHLKDRESIKIYDPTSGSGSLLINIGKSASKYISNKDNIKYYAQEL 248 Query: 137 AKS-------NAVTNG------VSERFDTLQSDW--------FSSVEGLF-DVIVSNPPY 174 ++ N V G V+ DTL+ DW ++ E L+ D +VSNPPY Sbjct: 249 KQNTYNLTRMNLVMRGILPDNIVTRNGDTLEDDWPYFDDKDPIATYEPLYVDAVVSNPPY 308 Query: 175 IES 177 +S Sbjct: 309 SQS 311 >gi|170289748|ref|YP_001736564.1| putative RNA methylase [Candidatus Korarchaeum cryptofilum OPF8] gi|170173828|gb|ACB06881.1| putative RNA methylase [Candidatus Korarchaeum cryptofilum OPF8] Length = 193 Score = 35.8 bits (81), Expect = 6.1, Method: Compositional matrix adjust. Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 4/75 (5%) Query: 101 ILDLGTGTGAVCL-ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 + DLG G G + + ALL + +G+D+ +A+EIAK NA G+ R L D Sbjct: 42 VADLGCGNGILAIGALLYGAS--SAIGIDLDPEAIEIAKRNADRLGLLGRARFLVMDVRD 99 Query: 160 SVEGLFDVIVSNPPY 174 E + D ++ NPP+ Sbjct: 100 FSEEV-DTVIQNPPF 113 >gi|167839725|ref|ZP_02466409.1| hypothetical protein Bpse38_23849 [Burkholderia thailandensis MSMB43] Length = 269 Score = 35.8 bits (81), Expect = 6.1, Method: Compositional matrix adjust. Identities = 36/110 (32%), Positives = 49/110 (44%), Gaps = 13/110 (11%) Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVC-LALLKESPFF 122 RL S+ +P T L++SA R +R+LD+G GTG V LA P Sbjct: 15 RLDFQSEML--KPVTRRLLESA--------RLRPSMRVLDIGCGTGGVSMLAAEMAGPTG 64 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEGLFDVIVSN 171 V +D S A+E A +NA + RF D G FDV+V+ Sbjct: 65 TVVAIDPSDVAIEAASANAERASLHNIRFRASGLDQVEGAHG-FDVVVAR 113 >gi|146342484|ref|YP_001207532.1| ribosomal protein L11 methyltransferase (L11 Mtase) [Bradyrhizobium sp. ORS278] gi|146195290|emb|CAL79315.1| Ribosomal protein L11 methyltransferase (L11 Mtase) [Bradyrhizobium sp. ORS278] Length = 298 Score = 35.8 bits (81), Expect = 6.1, Method: Compositional matrix adjust. Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 1/56 (1%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155 R+LDLGTGTG + +A K + +G DI ++ +A+ NA NG +++ Sbjct: 159 RVLDLGTGTGVLAIAAAKAT-RRSVLGSDIDAPSVSVARENARLNGAGPLVQVIRA 213 >gi|114771788|ref|ZP_01449181.1| Predicted SAM-dependent methyltransferase [alpha proteobacterium HTCC2255] gi|114547604|gb|EAU50495.1| Predicted SAM-dependent methyltransferase [alpha proteobacterium HTCC2255] Length = 396 Score = 35.8 bits (81), Expect = 6.1, Method: Compositional matrix adjust. Identities = 26/79 (32%), Positives = 38/79 (48%), Gaps = 7/79 (8%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 I+D+ + G LA L + VD S AL++A A +G S+ F T + D F Sbjct: 225 IIDVFSHVGGFSLAALSAGAT-SAIAVDSSQPALDLAIKGADASGFSKSFSTRKGDAFEV 283 Query: 161 VEGLFD------VIVSNPP 173 + LFD V+V +PP Sbjct: 284 MAQLFDEGERYQVVVCDPP 302 >gi|323443132|gb|EGB00751.1| hypothetical protein SAO46_0921 [Staphylococcus aureus O46] Length = 243 Score = 35.8 bits (81), Expect = 6.1, Method: Compositional matrix adjust. Identities = 27/83 (32%), Positives = 41/83 (49%), Gaps = 5/83 (6%) Query: 90 LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG--VGVDISCKALEIAKSNAVTNGVS 147 L R + + +R+LD+G TG V + L+ + G VGVD++ L+IA N N VS Sbjct: 12 LDRAQIEEGMRVLDIGCATGEV-IQLIAKRVGANGEVVGVDVNESLLKIANENNQYNNVS 70 Query: 148 ERFDTLQSDWFSSVEGLFDVIVS 170 ++ + G FD IV Sbjct: 71 YQYSDIYQ--LPETMGHFDAIVG 91 >gi|322709409|gb|EFZ00985.1| Putative S-adenosylmethionine-dependent methyltransferase of the seven beta-strand family [Metarhizium anisopliae ARSEF 23] Length = 226 Score = 35.8 bits (81), Expect = 6.1, Method: Compositional matrix adjust. Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 4/69 (5%) Query: 70 DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129 D+ R T+ L + A +L RD +LDLG G G++ AL +E + +GVD Sbjct: 29 DSDAERKTTQFLDSLSAAAAL----DRDTASVLDLGCGNGSMLFALREEGWTGRALGVDY 84 Query: 130 SCKALEIAK 138 S +++ +A+ Sbjct: 85 SPQSVALAR 93 >gi|219565266|dbj|BAH04163.1| putative SAM-dependent methyltransferase [Streptomyces triostinicus] Length = 232 Score = 35.8 bits (81), Expect = 6.1, Method: Compositional matrix adjust. Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 2/69 (2%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LD G GTG L L + + G+D+S +A+ IA+ A G+ F + + Sbjct: 56 VLDAGCGTGEDILHLAGKG--YAVTGLDLSSEAVAIARRKAEERGLDATFAVANALELAG 113 Query: 161 VEGLFDVIV 169 EG FD +V Sbjct: 114 YEGRFDTVV 122 >gi|118468119|ref|YP_886428.1| methyltransferase type 12 [Mycobacterium smegmatis str. MC2 155] gi|118169406|gb|ABK70302.1| methyltransferase type 12 [Mycobacterium smegmatis str. MC2 155] Length = 211 Score = 35.8 bits (81), Expect = 6.1, Method: Compositional matrix adjust. Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 2/51 (3%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150 R+LD+G G G + L + + +G+D S +A+E+A+ NA GV RF Sbjct: 42 RVLDVGCGAGEHTILLTRLG--YDVLGIDFSPQAIEMARENARGRGVDARF 90 >gi|296104818|ref|YP_003614964.1| putative ribosomal RNA large subunit methyltransferase G [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295059277|gb|ADF64015.1| putative ribosomal RNA large subunit methyltransferase G [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 378 Score = 35.8 bits (81), Expect = 6.2, Method: Compositional matrix adjust. Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 3/77 (3%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS--ERFDTLQSDWF 158 I+DLG G G + L LL ++P V D S A+ ++ N TN +R + + ++ Sbjct: 232 IVDLGCGNGVIGLTLLAKNPQASVVFSDESPMAVASSRLNVETNMPEALDRCEFMINNAL 291 Query: 159 SSVEGL-FDVIVSNPPY 174 S VE F+ + NPP+ Sbjct: 292 SGVEPFRFNAVFCNPPF 308 >gi|281413892|ref|ZP_06245634.1| 16S RNA G1207 methylase RsmC [Micrococcus luteus NCTC 2665] Length = 401 Score = 35.8 bits (81), Expect = 6.2, Method: Compositional matrix adjust. Identities = 22/89 (24%), Positives = 43/89 (48%), Gaps = 1/89 (1%) Query: 94 EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153 + R R++DLG G G + + + P + D S A+ + A N V++R + Sbjct: 254 DPRPPGRLVDLGCGNGLLSVGAARLWPHVTVLATDQSAVAVASTLATARANRVADRVRAV 313 Query: 154 QSDWFSS-VEGLFDVIVSNPPYIESVIVD 181 + D ++ +G + ++ NPP+ + VD Sbjct: 314 RDDALATWPDGTEECVLMNPPFHDGNAVD 342 >gi|238916967|ref|YP_002930484.1| hypothetical protein EUBELI_01036 [Eubacterium eligens ATCC 27750] gi|238872327|gb|ACR72037.1| Hypothetical protein EUBELI_01036 [Eubacterium eligens ATCC 27750] Length = 186 Score = 35.8 bits (81), Expect = 6.2, Method: Compositional matrix adjust. Identities = 25/89 (28%), Positives = 43/89 (48%), Gaps = 6/89 (6%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R LDL G+GA+ + L + V V+ + AL + K N + + ++ D S Sbjct: 44 RFLDLYAGSGAIGIEALSRGAK-EAVLVENARAALAVIKDNLAFTKLDSKAVIMEQDVLS 102 Query: 160 SV-----EGLFDVIVSNPPYIESVIVDCL 183 ++ +G+FD+I +PPY + D L Sbjct: 103 AINRLAGKGVFDIIFMDPPYGKDYEYDVL 131 >gi|226359905|ref|YP_002777683.1| hypothetical protein ROP_04910 [Rhodococcus opacus B4] gi|226238390|dbj|BAH48738.1| hypothetical protein [Rhodococcus opacus B4] Length = 495 Score = 35.8 bits (81), Expect = 6.2, Method: Compositional matrix adjust. Identities = 24/81 (29%), Positives = 41/81 (50%), Gaps = 3/81 (3%) Query: 69 SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128 +DT P ++ A+ +L ++ R V+ DLG G+G + ALL ++ F + D Sbjct: 286 NDTVAAAPPLNVIRREAVLGALGELDARTVI---DLGCGSGQLVSALLDDARFTEIAAAD 342 Query: 129 ISCKALEIAKSNAVTNGVSER 149 +S +AL IA + + ER Sbjct: 343 VSTRALSIAARRLQLDRMPER 363 >gi|163803356|ref|ZP_02197233.1| putative 16S rRNA m2G 1207 methyltransferase [Vibrio sp. AND4] gi|159172869|gb|EDP57709.1| putative 16S rRNA m2G 1207 methyltransferase [Vibrio sp. AND4] Length = 341 Score = 35.8 bits (81), Expect = 6.2, Method: Compositional matrix adjust. Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 6/86 (6%) Query: 89 SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148 +LP++ R +LD G G G + + K +P DI+ A+ +++ N +S Sbjct: 196 TLPKLSGR----VLDFGCGAGVLGAFMAKANPEITIDMCDINAYAITSSQATLKANDISG 251 Query: 149 RFDTLQSDWFSSVEGLFDVIVSNPPY 174 + SD +S + I+SNPP+ Sbjct: 252 Q--VFASDIYSDTANDYRFIISNPPF 275 >gi|156337258|ref|XP_001619839.1| hypothetical protein NEMVEDRAFT_v1g223766 [Nematostella vectensis] gi|156203785|gb|EDO27739.1| predicted protein [Nematostella vectensis] Length = 248 Score = 35.8 bits (81), Expect = 6.2, Method: Compositional matrix adjust. Identities = 32/119 (26%), Positives = 52/119 (43%), Gaps = 10/119 (8%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 ++ L++G G GA+ + + P + DI+ A++ NA +GV +Q+D F Sbjct: 75 LKFLEVGAGMGAIAIEFALQVPQAEVWATDINPAAVDDVAENARLHGVETSVTAIQADVF 134 Query: 159 --SSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFD--PRISLDGGIDGLSHYRTIADG 212 ++G+ FD+I PP C G +D D R + D L Y A G Sbjct: 135 DCDDLKGMKFDMIFFRPP-----AGFCEGCNEKDLDMSSRTAWDPNYSILERYLKGARG 188 >gi|288928551|ref|ZP_06422398.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Prevotella sp. oral taxon 317 str. F0108] gi|288331385|gb|EFC69969.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Prevotella sp. oral taxon 317 str. F0108] Length = 479 Score = 35.8 bits (81), Expect = 6.2, Method: Compositional matrix adjust. Identities = 30/114 (26%), Positives = 56/114 (49%), Gaps = 15/114 (13%) Query: 72 FEPRPETELLVDSALAFSLPRIEKR-----DVVRILDLGTGTGAVCLALLKESPFFKGVG 126 F+ P++ ++ A+ L + +R + DL TGTG + + +++ K VG Sbjct: 301 FKVGPKSFYQTNTQQAYHLYEVARRFANLSGTEIVYDLYTGTGTIANFVARQAK--KVVG 358 Query: 127 VDISCKALEIAKSNAVTNGV-------SERFDTLQSDWFSSVEGLFDVIVSNPP 173 V+ +A+ AK N+ NG+ + D L D+ ++ G DVI+++PP Sbjct: 359 VEYVPEAIADAKVNSELNGIGNTTFYAGDMKDILNDDFIAN-NGQPDVIITDPP 411 >gi|283836193|ref|ZP_06355934.1| ribosomal protein L11 methyltransferase [Citrobacter youngae ATCC 29220] gi|291067545|gb|EFE05654.1| ribosomal protein L11 methyltransferase [Citrobacter youngae ATCC 29220] Length = 293 Score = 35.8 bits (81), Expect = 6.2, Method: Compositional matrix adjust. Identities = 27/72 (37%), Positives = 44/72 (61%), Gaps = 4/72 (5%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159 ++D G G+G + +A LK K +GVDI +A++ ++ NA NGVSER + L D Sbjct: 162 VIDFGCGSGILAIAALKLG-AAKAIGVDIDPQAIQASRDNAQRNGVSERLELYLPKDQPE 220 Query: 160 SVEGLFDVIVSN 171 +++ DV+V+N Sbjct: 221 AMKA--DVVVAN 230 >gi|239991928|ref|ZP_04712592.1| hypothetical protein SrosN1_31802 [Streptomyces roseosporus NRRL 11379] Length = 295 Score = 35.8 bits (81), Expect = 6.2, Method: Compositional matrix adjust. Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 2/68 (2%) Query: 89 SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148 +LP K V R+LD+G+G G V L + + V VD + LE A++ A GV + Sbjct: 46 ALPTAPK--VRRVLDIGSGPGVVSCLLAEVFREAEVVAVDATPALLERARNRARRLGVID 103 Query: 149 RFDTLQSD 156 RF TL+++ Sbjct: 104 RFRTLEAE 111 >gi|225710904|gb|ACO11298.1| methyltransferase METT10D [Caligus rogercresseyi] Length = 436 Score = 35.8 bits (81), Expect = 6.2, Method: Compositional matrix adjust. Identities = 22/86 (25%), Positives = 42/86 (48%), Gaps = 2/86 (2%) Query: 94 EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153 ++R +R LD+G G + L + +G + ++L+ A++N N +S++ L Sbjct: 94 QRRTDIRGLDIGVGCSCIYPLLAARHFNWSMLGFENHPESLKHAQANITQNQLSDKISVL 153 Query: 154 QSDWFSSVEG--LFDVIVSNPPYIES 177 S F G + D + NPP+ +S Sbjct: 154 SSSSFFRALGDTVLDFTMCNPPFFDS 179 >gi|68075837|ref|XP_679838.1| methyl transferase-like protein [Plasmodium berghei strain ANKA] gi|56500670|emb|CAI04376.1| methyl transferase-like protein, putative [Plasmodium berghei] Length = 227 Score = 35.8 bits (81), Expect = 6.2, Method: Compositional matrix adjust. Identities = 46/162 (28%), Positives = 71/162 (43%), Gaps = 22/162 (13%) Query: 68 SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL-----KESPFF 122 SSDTF E L D A S +V +L++GTG+G + L L K Sbjct: 28 SSDTF---VFAEALEDDVEAIS------PNVNMVLEMGTGSGYLILFLYELLLKKNKKID 78 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIESVIV 180 +DI+ A ++ NG+S + + S+ F+++ G FD+I+ NPPY+E+ Sbjct: 79 LLYCIDINRDACNCVQNAISLNGIS-NVEIINSNLFNNLRTCGQFDIILFNPPYVETE-- 135 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL 222 E+ D S GG G V HL+ +G+ Sbjct: 136 ---QDELNKTDIVASYAGGKQGREVILKFLHTVYDHLSNNGI 174 >gi|291520465|emb|CBK75686.1| 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Butyrivibrio fibrisolvens 16/4] Length = 261 Score = 35.8 bits (81), Expect = 6.3, Method: Compositional matrix adjust. Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 2/75 (2%) Query: 96 RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155 RD +LD+GTGTG + + + K +G DI+ + AK A G+ F T + Sbjct: 43 RDGQHVLDIGTGTGVLPRNMYRYGA--KWIGTDITENQILQAKRLAAEAGMDIDFFTCPA 100 Query: 156 DWFSSVEGLFDVIVS 170 + +G FDVI + Sbjct: 101 ENVDYPDGTFDVITA 115 >gi|302142307|emb|CBI19510.3| unnamed protein product [Vitis vinifera] Length = 683 Score = 35.8 bits (81), Expect = 6.3, Method: Compositional matrix adjust. Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 3/75 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 I+D TG G + + S + +DI K +E A+ NA GV +R D ++ D F Sbjct: 518 IVDCFTGVGGNAIQFAQRSKHV--IAIDIDPKKIEYAQHNAAIYGVDDRIDFIKGDSFLL 575 Query: 161 VEGL-FDVIVSNPPY 174 L D + +PP+ Sbjct: 576 ASTLKADTVFLSPPW 590 >gi|226366125|ref|YP_002783908.1| methyltransferase [Rhodococcus opacus B4] gi|226244615|dbj|BAH54963.1| putative methyltransferase [Rhodococcus opacus B4] Length = 223 Score = 35.8 bits (81), Expect = 6.3, Method: Compositional matrix adjust. Identities = 35/108 (32%), Positives = 51/108 (47%), Gaps = 17/108 (15%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+LDL GTGA+ + + VD+S +A NA N + R ++ D Sbjct: 32 RVLDLCCGTGALSVEACAAGAGWV-TAVDVSRRAAISTWLNATLNRRTIRV--VRGDLVD 88 Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDP-RI---SLDGGIDG 202 +V L FDV+V+NPPY + D P R+ + DGG+DG Sbjct: 89 AVRTLRFDVVVANPPYAPA---------TDDGRPGRVLARAWDGGVDG 127 >gi|303240394|ref|ZP_07326912.1| Methyltransferase type 11 [Acetivibrio cellulolyticus CD2] gi|302592121|gb|EFL61851.1| Methyltransferase type 11 [Acetivibrio cellulolyticus CD2] Length = 216 Score = 35.8 bits (81), Expect = 6.3, Method: Compositional matrix adjust. Identities = 27/81 (33%), Positives = 42/81 (51%), Gaps = 16/81 (19%) Query: 100 RILDLGTGTGAVCL-ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 ILDLG G G + A ++ P K +G+DI+ + +++A SNA G+S + WF Sbjct: 35 NILDLGCGRGNETIQAAIQTGPHGKAIGLDITQEMIDVALSNAEGIGIS-------NIWF 87 Query: 159 --SSVEGL------FDVIVSN 171 +E L FD ++SN Sbjct: 88 VKGDIENLPFDERIFDAVISN 108 >gi|239945464|ref|ZP_04697401.1| hypothetical protein SrosN15_31040 [Streptomyces roseosporus NRRL 15998] gi|291448921|ref|ZP_06588311.1| conserved hypothetical protein [Streptomyces roseosporus NRRL 15998] gi|291351868|gb|EFE78772.1| conserved hypothetical protein [Streptomyces roseosporus NRRL 15998] Length = 295 Score = 35.8 bits (81), Expect = 6.3, Method: Compositional matrix adjust. Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 2/68 (2%) Query: 89 SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148 +LP K V R+LD+G+G G V L + + V VD + LE A++ A GV + Sbjct: 46 ALPTAPK--VRRVLDIGSGPGVVSCLLAEVFREAEVVAVDATPALLERARNRARRLGVID 103 Query: 149 RFDTLQSD 156 RF TL+++ Sbjct: 104 RFRTLEAE 111 >gi|218708541|ref|YP_002416162.1| hypothetical protein VS_0507 [Vibrio splendidus LGP32] gi|262828815|sp|B7VJ58|TRMN6_VIBSL RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName: Full=tRNA m6A37 methyltransferase gi|218321560|emb|CAV17512.1| Conserved hypothetical protein [Vibrio splendidus LGP32] Length = 242 Score = 35.8 bits (81), Expect = 6.3, Method: Compositional matrix adjust. Identities = 28/83 (33%), Positives = 41/83 (49%), Gaps = 11/83 (13%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVSERF----DTLQ 154 +LD+GTGTG LAL+ F + +DI A++ A N + +R D++ Sbjct: 46 VLDIGTGTG--LLALMAAQRFEDALISAIDIDQHAIDAATVNIEQSPWQDRISLHHDSVL 103 Query: 155 SDWFSSVEGLFDVIVSNPPYIES 177 + FS FD I+ NPPY S Sbjct: 104 TTDFSQ---RFDAIICNPPYFNS 123 >gi|206890280|ref|YP_002248899.1| hypothetical protein THEYE_A1073 [Thermodesulfovibrio yellowstonii DSM 11347] gi|206742218|gb|ACI21275.1| hypothetical protein THEYE_A1073 [Thermodesulfovibrio yellowstonii DSM 11347] Length = 256 Score = 35.8 bits (81), Expect = 6.3, Method: Compositional matrix adjust. Identities = 18/53 (33%), Positives = 33/53 (62%) Query: 90 LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142 L +IEK+ I+++G+G G + + L + F K + VDIS + L+ K+N++ Sbjct: 30 LKKIEKKHYSTIIEIGSGRGFLTIPLSETLSFEKFIHVDISFEFLKRLKTNSI 82 >gi|229582068|ref|YP_002840467.1| methylase [Sulfolobus islandicus Y.N.15.51] gi|228012784|gb|ACP48545.1| methylase [Sulfolobus islandicus Y.N.15.51] Length = 207 Score = 35.8 bits (81), Expect = 6.3, Method: Compositional matrix adjust. Identities = 43/156 (27%), Positives = 73/156 (46%), Gaps = 29/156 (18%) Query: 53 RILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVC 112 RI+ +R F +L L+ T+EP +T++L++ L ++ K + ++LD+G+G+G + Sbjct: 5 RIVEFRGF---KLCLNDQTYEPSDDTDILLN------LLKVGKGE--KVLDMGSGSGILG 53 Query: 113 LALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER---FDTLQSDWFSSVEGL-FDVI 168 + L K + VDI+ A + N + + L D S + FDV Sbjct: 54 IWSLIMGG--KVMFVDINPYATTSTLCSLKVNNLYKSPNYLGVLNCDLLSCLRKYDFDVA 111 Query: 169 VSNPPYIESVIVDCLGLEVRDFDPRI--SLDGGIDG 202 + NPPY L V +++ I S GG DG Sbjct: 112 IFNPPY----------LPVEEYNEWIGYSWSGGKDG 137 >gi|256545047|ref|ZP_05472414.1| N-6 adenine-specific DNA methylase [Anaerococcus vaginalis ATCC 51170] gi|256399250|gb|EEU12860.1| N-6 adenine-specific DNA methylase [Anaerococcus vaginalis ATCC 51170] Length = 233 Score = 35.8 bits (81), Expect = 6.4, Method: Compositional matrix adjust. Identities = 25/96 (26%), Positives = 46/96 (47%), Gaps = 7/96 (7%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 +DS L + +++K + ++D+G+G+G + LA K ++I + + K N Sbjct: 25 IDSILLANFSKMKKNKI--LIDIGSGSGILSLACSSYYNLSKVFSIEIQKEKANLLKENI 82 Query: 142 VTNGVSE---RFDTLQSDWFSSVEGLFDVIVSNPPY 174 NG++ D L F + D I++NPPY Sbjct: 83 KLNGINNIEVVNDDLNKVNFPN--NFCDYIITNPPY 116 >gi|242399935|ref|YP_002995360.1| Predicted N6-adenine-specific DNA methylase [Thermococcus sibiricus MM 739] gi|242266329|gb|ACS91011.1| Predicted N6-adenine-specific DNA methylase [Thermococcus sibiricus MM 739] Length = 365 Score = 35.8 bits (81), Expect = 6.4, Method: Compositional matrix adjust. Identities = 26/99 (26%), Positives = 49/99 (49%), Gaps = 10/99 (10%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 + +++A ++ + + D +LD G+G + + L K +G++ K L+ A NA Sbjct: 202 LKASIANAMIELAELDEGSVLDPMCGSGTILIELALRGYEGKIIGIEKYKKHLKGAMMNA 261 Query: 142 VTNGVSERFDTLQSD------WFSSVEGLFDVIVSNPPY 174 + GV ++ D +Q D + SV D ++SN PY Sbjct: 262 LAAGVLDKIDLIQGDATRLSHYLDSV----DFVISNLPY 296 >gi|168186539|ref|ZP_02621174.1| cyclopropane fatty acid synthase family protein [Clostridium botulinum C str. Eklund] gi|169295425|gb|EDS77558.1| cyclopropane fatty acid synthase family protein [Clostridium botulinum C str. Eklund] Length = 391 Score = 35.8 bits (81), Expect = 6.4, Method: Compositional matrix adjust. Identities = 30/117 (25%), Positives = 56/117 (47%), Gaps = 8/117 (6%) Query: 38 LTNAIVRSLKHE-SIHRILGWRDFYNVRL--TLSSDTFEPRPETELLVDSAL---AFSLP 91 +TN ++ K + H LG DFY++ L T+S + + + L D+ L + L Sbjct: 100 ITNHSIKQNKKDIQFHYDLG-NDFYSIWLDDTMSYSCAYFKTKEDTLYDAQLNKVKYILK 158 Query: 92 RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148 ++ ++ R+LD+G G G + + KE K G+ +S + +E NG+ + Sbjct: 159 KLNLKNGDRLLDIGCGWGELIIEAAKEYG-VKATGITLSSEQVEKVNDRIKKNGIED 214 >gi|158520602|ref|YP_001528472.1| methyltransferase type 11 [Desulfococcus oleovorans Hxd3] gi|158509428|gb|ABW66395.1| Methyltransferase type 11 [Desulfococcus oleovorans Hxd3] Length = 253 Score = 35.8 bits (81), Expect = 6.4, Method: Compositional matrix adjust. Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 3/95 (3%) Query: 59 DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118 D Y + + L P + + A+ ++P ++ ++I D+G GTGA L LL Sbjct: 2 DDYQLLIDLHKSADRQGPGGDAETEQAIFLAMP--DRSKPLKIADIGCGTGASAL-LLAR 58 Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153 P + VD LE+ + A + G+SE+ TL Sbjct: 59 LPKAQITAVDFLEDFLEVLEDRAASMGLSEKITTL 93 >gi|332978604|gb|EGK15308.1| methyltransferase domain protein [Psychrobacter sp. 1501(2011)] Length = 403 Score = 35.8 bits (81), Expect = 6.4, Method: Compositional matrix adjust. Identities = 31/119 (26%), Positives = 53/119 (44%), Gaps = 13/119 (10%) Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162 D+GTGTG + + L K + + D++ +AL+ A+ N G+S Q+D F + Sbjct: 231 DIGTGTGLLAIVLAKRG-VKQIIATDLNPRALDCAQDNFDRLGLSN-VQLQQADLFPNDV 288 Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221 ++IV NPP++ + L V D + + R G +HL + G Sbjct: 289 PKANLIVCNPPWLPAKPSSPLEYAVYDANSAM-----------LRGFLMGAKQHLTESG 336 >gi|325290286|ref|YP_004266467.1| demethylmenaquinone methyltransferase [Syntrophobotulus glycolicus DSM 8271] gi|324965687|gb|ADY56466.1| demethylmenaquinone methyltransferase [Syntrophobotulus glycolicus DSM 8271] Length = 238 Score = 35.8 bits (81), Expect = 6.4, Method: Compositional matrix adjust. Identities = 28/98 (28%), Positives = 45/98 (45%), Gaps = 10/98 (10%) Query: 69 SDTFEPRPETELLVDSALAFSLPRIEKRDVVR---------ILDLGTGTGAVCLALLKE- 118 DTF L++S ++ + R +R V+ ILDL GTG + + + K Sbjct: 13 QDTFNSIASRYDLMNSLMSMGMDRSWRRKTVQTVKAGPGLNILDLCCGTGKMVMEIGKRV 72 Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 P + G+D S + LE A+ N + +R D +Q D Sbjct: 73 GPSGRVTGLDFSEQMLEKARENLLEYPYRDRVDLIQGD 110 >gi|312884762|ref|ZP_07744463.1| ribosomal protein L11 methyltransferase [Vibrio caribbenthicus ATCC BAA-2122] gi|309367675|gb|EFP95226.1| ribosomal protein L11 methyltransferase [Vibrio caribbenthicus ATCC BAA-2122] Length = 295 Score = 35.8 bits (81), Expect = 6.4, Method: Compositional matrix adjust. Identities = 32/112 (28%), Positives = 58/112 (51%), Gaps = 17/112 (15%) Query: 74 PRPET-ELLVDSALAFS----------LPRIEKRDVV--RILDLGTGTGAVCLALLKESP 120 P P+ +++D LAF L +E D+ ++D G G+G + +A +K Sbjct: 123 PEPDAVNVMLDPGLAFGTGTHPTTALCLEWLEGLDLSGKTVIDFGCGSGILAIAAIKLG- 181 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFSSVEGLFDVIVSN 171 + +G+DI +AL ++ NA NGV+++ + L D ++ L DV+V+N Sbjct: 182 AKQVIGIDIDPQALLASQDNAQRNGVADKLEVYLPKDQPENL--LADVVVAN 231 >gi|283779327|ref|YP_003370082.1| O-methyltransferase family 2 [Pirellula staleyi DSM 6068] gi|283437780|gb|ADB16222.1| O-methyltransferase family 2 [Pirellula staleyi DSM 6068] Length = 349 Score = 35.8 bits (81), Expect = 6.4, Method: Compositional matrix adjust. Identities = 20/61 (32%), Positives = 37/61 (60%), Gaps = 1/61 (1%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 I+D+G G GA+ A+L++ +G+ D + +E A S ++G+S+R T ++F+S Sbjct: 186 IIDVGGGHGAILTAILQKHKNVRGIVFD-APSVVEGAASAIQSSGLSDRLSTAAGNFFAS 244 Query: 161 V 161 V Sbjct: 245 V 245 >gi|212696291|ref|ZP_03304419.1| hypothetical protein ANHYDRO_00828 [Anaerococcus hydrogenalis DSM 7454] gi|212676920|gb|EEB36527.1| hypothetical protein ANHYDRO_00828 [Anaerococcus hydrogenalis DSM 7454] Length = 233 Score = 35.8 bits (81), Expect = 6.4, Method: Compositional matrix adjust. Identities = 26/94 (27%), Positives = 44/94 (46%), Gaps = 3/94 (3%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 +DS L + +++K ++D+G G G + LA L K G++I K EI N Sbjct: 25 IDSILLANFSKMKKNKT--LIDIGAGNGILSLACLSYYNLSKVYGIEIQEKKAEIFNENL 82 Query: 142 VTNGVSERFDTLQSDWFSSVEGLF-DVIVSNPPY 174 N ++ + ++ F D I++NPPY Sbjct: 83 KLNSINNIEIINKDLNLTNFPNNFCDYIITNPPY 116 >gi|125718853|ref|YP_001035986.1| hypothetical protein SSA_2065 [Streptococcus sanguinis SK36] gi|125498770|gb|ABN45436.1| Conserved hypothetical protein [Streptococcus sanguinis SK36] gi|327462770|gb|EGF09092.1| methyltransferase domain protein [Streptococcus sanguinis SK1057] gi|328944875|gb|EGG39035.1| methyltransferase domain protein [Streptococcus sanguinis SK1087] gi|332359304|gb|EGJ37125.1| methyltransferase domain protein [Streptococcus sanguinis SK49] gi|332359966|gb|EGJ37780.1| methyltransferase domain protein [Streptococcus sanguinis SK1056] gi|332365808|gb|EGJ43565.1| methyltransferase domain protein [Streptococcus sanguinis SK355] Length = 230 Score = 35.8 bits (81), Expect = 6.4, Method: Compositional matrix adjust. Identities = 28/74 (37%), Positives = 41/74 (55%), Gaps = 6/74 (8%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 V LD+G G G C+ L S +F+ V G+D+S L+IAK + V + + LQ D+ Sbjct: 40 VSALDIGCGGGNTCIFL---SSYFQHVTGIDLSVDFLQIAK-DKVEKEDLQNVELLQDDF 95 Query: 158 FSSV-EGLFDVIVS 170 ++V E FD I S Sbjct: 96 LTAVFEKQFDFIFS 109 >gi|150021621|ref|YP_001306975.1| methyltransferase small [Thermosipho melanesiensis BI429] gi|149794142|gb|ABR31590.1| methyltransferase small [Thermosipho melanesiensis BI429] Length = 198 Score = 35.8 bits (81), Expect = 6.4, Method: Compositional matrix adjust. Identities = 31/76 (40%), Positives = 42/76 (55%), Gaps = 3/76 (3%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 ILD+G G G + + L KE+P K DI+ +A+E AK NA N ++ D + F Sbjct: 61 ILDIGCGYGIIGITLKKENPDIKLYMSDINERAVEFAKINAKDNNIAA--DIRKGYLFEV 118 Query: 161 VEG-LFDVIVSNPPYI 175 E FD IVSNPP + Sbjct: 119 WENEKFDHIVSNPPIV 134 >gi|77361168|ref|YP_340743.1| ribosomal RNA small subunit methyltransferase D [Pseudoalteromonas haloplanktis TAC125] gi|123588435|sp|Q3IHQ6|RLMG_PSEHT RecName: Full=Ribosomal RNA large subunit methyltransferase G; AltName: Full=23S rRNA m2G1835 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rlmG gi|76876079|emb|CAI87301.1| Putative ribosomal RNA small subunit methyltransferase D (rRNA (guanine-N(2)-)-methyltransferase) (16S rRNA m2G966 methyltransferase) [Pseudoalteromonas haloplanktis TAC125] Length = 382 Score = 35.8 bits (81), Expect = 6.4, Method: Compositional matrix adjust. Identities = 30/94 (31%), Positives = 43/94 (45%), Gaps = 5/94 (5%) Query: 90 LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN--GVS 147 LP K I+DLG G G V L L P VD S A+E A+ N N Sbjct: 227 LPETNKAK--SIIDLGCGNGVVGLMALSRCPNANITFVDESYMAVESARLNVELNMEAKY 284 Query: 148 ERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIV 180 E+ +++D S E D+++ NPP+ ++ V Sbjct: 285 EQCSFVENDCLSGFERDSVDMVLCNPPFHQAQAV 318 >gi|322515646|ref|ZP_08068624.1| ribosomal protein L11 methyltransferase [Actinobacillus ureae ATCC 25976] gi|322118297|gb|EFX90580.1| ribosomal protein L11 methyltransferase [Actinobacillus ureae ATCC 25976] Length = 293 Score = 35.8 bits (81), Expect = 6.5, Method: Compositional matrix adjust. Identities = 23/72 (31%), Positives = 41/72 (56%), Gaps = 4/72 (5%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159 ++D G G+G + +A LK + +G+DI +A+ + +NA NGV++R L D Sbjct: 162 VIDFGCGSGILAIAALKLG-AKQAIGIDIDPQAILASTNNAEANGVADRLQLFLAKDQPQ 220 Query: 160 SVEGLFDVIVSN 171 ++ DV+V+N Sbjct: 221 DLQA--DVVVAN 230 >gi|312889232|ref|ZP_07748787.1| Methyltransferase type 11 [Mucilaginibacter paludis DSM 18603] gi|311298284|gb|EFQ75398.1| Methyltransferase type 11 [Mucilaginibacter paludis DSM 18603] Length = 267 Score = 35.8 bits (81), Expect = 6.5, Method: Compositional matrix adjust. Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 3/93 (3%) Query: 78 TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEI 136 T L D A + RI+ + +L+L +GTG+V LL+ P + D+ LE Sbjct: 20 TPFLFDGFSADLMERIDFSNAYNVLELASGTGSVTKQLLRHLPSGAHLTATDLQADMLET 79 Query: 137 AKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIV 169 AK +S +D + ++G +D+IV Sbjct: 80 AKQQVTATNIS--WDVVDMTNIPYIDGQYDLIV 110 >gi|299136171|ref|ZP_07029355.1| Methyltransferase type 11 [Acidobacterium sp. MP5ACTX8] gi|298602295|gb|EFI58449.1| Methyltransferase type 11 [Acidobacterium sp. MP5ACTX8] Length = 242 Score = 35.8 bits (81), Expect = 6.5, Method: Compositional matrix adjust. Identities = 28/93 (30%), Positives = 42/93 (45%), Gaps = 9/93 (9%) Query: 97 DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 D RIL+LG G G KE P G+D+S + ++ A+ ER L+ Sbjct: 55 DGTRILELGCGPGLYACRFAKEYPQITATGIDLSKRLIQRAR---------ERASNLRLH 105 Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRD 189 + +EG + P +++VIV L L V D Sbjct: 106 NCTFIEGDAQALKELPHSVDAVIVSRLFLIVPD 138 >gi|299144415|ref|ZP_07037495.1| putative SAM-dependent methyltransferase [Peptoniphilus sp. oral taxon 386 str. F0131] gi|298518900|gb|EFI42639.1| putative SAM-dependent methyltransferase [Peptoniphilus sp. oral taxon 386 str. F0131] Length = 231 Score = 35.8 bits (81), Expect = 6.5, Method: Compositional matrix adjust. Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 8/80 (10%) Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162 D G+GTG +CL L+ ++ F + +I+ A+++ + + N + ++ D S V+ Sbjct: 41 DFGSGTGILCLRLIDKATKF--INFEINENAVKLLNKSIIENHLDDKIINYNID-ISDVK 97 Query: 163 GL-----FDVIVSNPPYIES 177 D IV NPPY S Sbjct: 98 NFVLHQSVDTIVINPPYYNS 117 >gi|302887430|ref|XP_003042603.1| hypothetical protein NECHADRAFT_104604 [Nectria haematococca mpVI 77-13-4] gi|256723515|gb|EEU36890.1| hypothetical protein NECHADRAFT_104604 [Nectria haematococca mpVI 77-13-4] Length = 345 Score = 35.8 bits (81), Expect = 6.5, Method: Compositional matrix adjust. Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 5/62 (8%) Query: 96 RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155 RD R+LD+GTGTG+ + +P + +GVD+S I S N + E D L+ Sbjct: 107 RDAKRVLDIGTGTGSWAIDYADANPEAEVIGVDLS----PIQPSFVPPNLIFE-IDDLEK 161 Query: 156 DW 157 +W Sbjct: 162 EW 163 >gi|152990873|ref|YP_001356595.1| methyltransferase [Nitratiruptor sp. SB155-2] gi|166215343|sp|A6Q429|CMOA_NITSB RecName: Full=tRNA (cmo5U34)-methyltransferase gi|151422734|dbj|BAF70238.1| methyltransferase [Nitratiruptor sp. SB155-2] Length = 239 Score = 35.8 bits (81), Expect = 6.5, Method: Compositional matrix adjust. Identities = 34/114 (29%), Positives = 53/114 (46%), Gaps = 16/114 (14%) Query: 72 FEPRPETELLVDSALAFSLPRIEK-----RDVV--------RILDLGTGTGAVCLALLKE 118 FE E + D +A S+P ++ RD+V R+ DLG TG++ + + K Sbjct: 15 FEFDEEVASVFDDMIARSVPFYKENMALVRDIVVKNVVQKDRVYDLGCSTGSLLIDIAKR 74 Query: 119 SPF-FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSN 171 SPF + +G+D S L+ A A GVS D ++D S + +SN Sbjct: 75 SPFSLELIGLDSSEAMLQRAHHKAKAFGVS--IDFQKADIISYAYKPAKIFISN 126 >gi|257066909|ref|YP_003153165.1| putative RNA methylase [Anaerococcus prevotii DSM 20548] gi|256798789|gb|ACV29444.1| putative RNA methylase [Anaerococcus prevotii DSM 20548] Length = 375 Score = 35.8 bits (81), Expect = 6.5, Method: Compositional matrix adjust. Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 11/69 (15%) Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL--FDVIVSNPPYIESVIVDC 182 +G DIS +A+ +AK+NA+ GV E ++ D S + V+++NPPY Sbjct: 254 LGSDISGRAISLAKNNALNAGVEEDIAFVKRDIGSVAVSRDDYGVLIANPPY-------- 305 Query: 183 LGLEVRDFD 191 GL + D D Sbjct: 306 -GLRLSDMD 313 >gi|134095752|ref|YP_001100827.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/2-octaprenyl-6-hydroxy phenol methylase [Herminiimonas arsenicoxydans] gi|133739655|emb|CAL62706.1| 3-demethylubiquinone-9 3-methyltransferase (3,4-dihydroxy-5-hexaprenylbenzoate methyltransferase) (DHHB methyltransferase) [Herminiimonas arsenicoxydans] Length = 231 Score = 35.8 bits (81), Expect = 6.5, Method: Compositional matrix adjust. Identities = 23/73 (31%), Positives = 44/73 (60%), Gaps = 9/73 (12%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGV---GVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 ++D+G G G +L ES KG G+D+S KAL++A +++ +GV R++ + ++ Sbjct: 50 VIDIGCGGG-----ILSESMARKGANVTGIDLSEKALKVADLHSLESGVQVRYELIAAED 104 Query: 158 FSSVE-GLFDVIV 169 ++ E G FD++ Sbjct: 105 MAAREAGKFDIVT 117 >gi|186682041|ref|YP_001865237.1| methyltransferase type 11 [Nostoc punctiforme PCC 73102] gi|186464493|gb|ACC80294.1| Methyltransferase type 11 [Nostoc punctiforme PCC 73102] Length = 131 Score = 35.8 bits (81), Expect = 6.5, Method: Compositional matrix adjust. Identities = 19/60 (31%), Positives = 35/60 (58%), Gaps = 1/60 (1%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 + DLG+G G + ++ +GVG+DI+ + ++ A NA GV++R +Q D F++ Sbjct: 2 LYDLGSGDGRIVNTAAQKF-GTRGVGIDINPERIKEANENAQKAGVTDRVKFIQQDLFNT 60 >gi|294010470|ref|YP_003543930.1| ubiquinone/menaquinone biosynthesis methyltransferase [Sphingobium japonicum UT26S] gi|292673800|dbj|BAI95318.1| ubiquinone/menaquinone biosynthesis methyltransferase [Sphingobium japonicum UT26S] Length = 224 Score = 35.8 bits (81), Expect = 6.6, Method: Compositional matrix adjust. Identities = 16/43 (37%), Positives = 27/43 (62%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143 I+D+G GTG+ L L ++ P + +G+D +AL+IA+ A Sbjct: 45 IVDIGCGTGSFALLLKRDEPSARVIGLDPDAEALDIARRKAAA 87 >gi|229163055|ref|ZP_04291011.1| Biotin biosynthesis protein BioC [Bacillus cereus R309803] gi|228620461|gb|EEK77331.1| Biotin biosynthesis protein BioC [Bacillus cereus R309803] Length = 242 Score = 35.8 bits (81), Expect = 6.6, Method: Compositional matrix adjust. Identities = 28/86 (32%), Positives = 42/86 (48%), Gaps = 9/86 (10%) Query: 92 RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKS-NAVTN--GVSE 148 R +RIL+LG GTG V L K P VD + + + +AK+ N V N + E Sbjct: 12 RYSANSSIRILELGCGTGYVTEQLSKVFPKAHITAVDFAHEMIAVAKTRNNVGNVKFLCE 71 Query: 149 RFDTLQSDWFSSVEGLFDVIVSNPPY 174 + L+ +E +DVI+SN + Sbjct: 72 DIEQLK------LEASYDVIISNATF 91 >gi|146098018|ref|XP_001468293.1| hypothetical protein [Leishmania infantum] gi|134072660|emb|CAM71377.1| conserved hypothetical protein [Leishmania infantum JPCM5] gi|322502248|emb|CBZ37332.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 253 Score = 35.8 bits (81), Expect = 6.6, Method: Compositional matrix adjust. Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 6/63 (9%) Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162 D+G+G G VCL +L E+ K VGV+I + A+ S+R L SD FS E Sbjct: 110 DIGSGVGNVCLQVLSETKCPKSVGVEIIPSRIRAAEE------ASKRAKLLYSDIFSKKE 163 Query: 163 GLF 165 ++ Sbjct: 164 VVW 166 >gi|114773258|ref|ZP_01450493.1| methylation of 50S ribosomal subunit protein L11 (ribosomal protein L11 methyltransferase) [alpha proteobacterium HTCC2255] gi|114546377|gb|EAU49286.1| methylation of 50S ribosomal subunit protein L11 (ribosomal protein L11 methyltransferase) [alpha proteobacterium HTCC2255] Length = 292 Score = 35.8 bits (81), Expect = 6.6, Method: Compositional matrix adjust. Identities = 18/52 (34%), Positives = 32/52 (61%), Gaps = 1/52 (1%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150 ++LD G G+G + +A LK +G+DI +AL+ ++NA NGV+++ Sbjct: 160 AKVLDFGCGSGILGIAALKLGAA-DMLGIDIDPQALQATEANAQRNGVADKL 210 >gi|328542979|ref|YP_004303088.1| ribosomal protein L11 methyltransferase [polymorphum gilvum SL003B-26A1] gi|326412725|gb|ADZ69788.1| Ribosomal protein L11 methyltransferase [Polymorphum gilvum SL003B-26A1] Length = 296 Score = 35.8 bits (81), Expect = 6.6, Method: Compositional matrix adjust. Identities = 30/86 (34%), Positives = 41/86 (47%), Gaps = 11/86 (12%) Query: 93 IEKRDVVRILDLGTGTG--AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150 + +R ILDLGTGTG A+ A L F DI A A+ NA NGVS Sbjct: 147 LARRRYANILDLGTGTGVLAIAAAKLARQRVF---ATDIDPVATRTARENARLNGVSTLV 203 Query: 151 DT-----LQSDWFSSVEGLFDVIVSN 171 T + F+ + G FD++++N Sbjct: 204 RTFTVPGVDHRLFAEL-GPFDLVIAN 228 >gi|289193240|ref|YP_003459181.1| Methyltransferase type 11 [Methanocaldococcus sp. FS406-22] gi|288939690|gb|ADC70445.1| Methyltransferase type 11 [Methanocaldococcus sp. FS406-22] Length = 277 Score = 35.8 bits (81), Expect = 6.6, Method: Compositional matrix adjust. Identities = 21/70 (30%), Positives = 39/70 (55%), Gaps = 4/70 (5%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS- 159 +L++GTG G + + L KE K + ++ S + + K N NG+ E + + +DW S Sbjct: 73 VLEIGTGAGTLTIPLAKEVK--KVIAIEKSEMNIRLLKENLRENGI-ENVEIINADWNSI 129 Query: 160 SVEGLFDVIV 169 ++ FD++V Sbjct: 130 DIDDKFDLVV 139 >gi|256070796|ref|XP_002571728.1| rna m5u methyltransferase [Schistosoma mansoni] gi|238656875|emb|CAZ27958.1| rna m5u methyltransferase, putative [Schistosoma mansoni] Length = 607 Score = 35.8 bits (81), Expect = 6.6, Method: Compositional matrix adjust. Identities = 33/91 (36%), Positives = 49/91 (53%), Gaps = 13/91 (14%) Query: 94 EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153 EK+ + +LD+ GTG + L L K F + +G+D+ A+E AKSNA N D Sbjct: 444 EKKRI--LLDVCCGTGTIALCLSKH--FDRVIGIDMCNSAIEDAKSNAKLN------DIQ 493 Query: 154 QSDWFS--SVEGLFDVIVSNPPYIE-SVIVD 181 ++F+ + L + I S P Y + SVIVD Sbjct: 494 NVEFFAGKAENMLRNTIDSLPEYCDLSVIVD 524 >gi|163867842|ref|YP_001609046.1| 3-demethylubiquinone-9 3-methyltransferase [Bartonella tribocorum CIP 105476] gi|189037614|sp|A9IQF4|UBIG_BART1 RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName: Full=3,4-dihydroxy-5-hexaprenylbenzoate methyltransferase; Short=DHHB methyltransferase gi|161017493|emb|CAK01051.1| 3-demethylubiquinone-9 3-methyltransferase [Bartonella tribocorum CIP 105476] Length = 247 Score = 35.8 bits (81), Expect = 6.7, Method: Compositional matrix adjust. Identities = 21/74 (28%), Positives = 41/74 (55%), Gaps = 2/74 (2%) Query: 97 DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 D ++ILD+G G G +C + + VGVD + +++AK +A N +S + T ++ Sbjct: 64 DNLKILDIGCGGGLLCEPMARLGATV--VGVDAAQTNIDVAKIHAAQNNLSIDYRTTTAE 121 Query: 157 WFSSVEGLFDVIVS 170 ++ FD+I++ Sbjct: 122 ALANEGEKFDIILN 135 >gi|157963957|ref|YP_001503991.1| putative SAM-dependent methyltransferase [Shewanella pealeana ATCC 700345] gi|205829609|sp|A8HA69|RLMF_SHEPA RecName: Full=Ribosomal RNA large subunit methyltransferase F; AltName: Full=23S rRNA mA1618 methyltransferase; AltName: Full=rRNA adenine N-6-methyltransferase gi|157848957|gb|ABV89456.1| protein of unknown function DUF890 [Shewanella pealeana ATCC 700345] Length = 380 Score = 35.8 bits (81), Expect = 6.7, Method: Compositional matrix adjust. Identities = 30/97 (30%), Positives = 48/97 (49%), Gaps = 12/97 (12%) Query: 92 RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG---VSE 148 RI K VR+LD+GTG + L +S + VG D+ L IA + + G ++ Sbjct: 144 RIPKGPKVRVLDIGTGANVIYPLLGIQSYGWDFVGSDVD--PLSIANAQQIFAGNSDIAN 201 Query: 149 RFDT-LQSDWFSSVEGL------FDVIVSNPPYIESV 178 +F + LQ+D G+ FD+ + NPP+ S+ Sbjct: 202 KFSSRLQADSKHVFHGVIEANERFDLTLCNPPFHASL 238 >gi|323702677|ref|ZP_08114338.1| PUA domain containing protein [Desulfotomaculum nigrificans DSM 574] gi|323532340|gb|EGB22218.1| PUA domain containing protein [Desulfotomaculum nigrificans DSM 574] Length = 391 Score = 35.8 bits (81), Expect = 6.8, Method: Compositional matrix adjust. Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 7/80 (8%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+LD TG + K + +G+DI+ ALE+A+ NA NG S+ +++ F Sbjct: 219 RVLDCFCHTGTFSMYAAKFGAR-EVLGLDIAAPALEVARVNARLNGYSDICTFKETNSFD 277 Query: 160 SVEGL------FDVIVSNPP 173 + + FDV++ +PP Sbjct: 278 ELRAMEKAGEKFDVVILDPP 297 >gi|322412423|gb|EFY03331.1| methyltransferase [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 384 Score = 35.8 bits (81), Expect = 6.8, Method: Compositional matrix adjust. Identities = 23/58 (39%), Positives = 35/58 (60%), Gaps = 3/58 (5%) Query: 126 GVDISCKALEIAKSNAVTNGVSE--RFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181 G DI + +EIAKSNA G+S+ F ++ F + + + VI+SNPPY E ++ D Sbjct: 261 GFDIDGRMIEIAKSNAEEAGLSDVITFKQMRLQDFRT-DKVNGVIISNPPYGERLLDD 317 >gi|261367521|ref|ZP_05980404.1| RNA methyltransferase, RsmD family [Subdoligranulum variabile DSM 15176] gi|282570303|gb|EFB75838.1| RNA methyltransferase, RsmD family [Subdoligranulum variabile DSM 15176] Length = 182 Score = 35.8 bits (81), Expect = 6.8, Method: Compositional matrix adjust. Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 4/88 (4%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD-- 156 R+LDL G+G + + L V VD S +AL I +N GV + D + Sbjct: 44 ARVLDLFAGSGQLGIEALSRGAK-SCVFVDRSPEALGIVTANCKAAGVERQSDIRHGEAL 102 Query: 157 -WFSSVEGLFDVIVSNPPYIESVIVDCL 183 + +++ G FD+++ +PP+ + +I L Sbjct: 103 AFLANIRGPFDLVLLDPPFHQGLIGQVL 130 >gi|160940954|ref|ZP_02088294.1| hypothetical protein CLOBOL_05846 [Clostridium bolteae ATCC BAA-613] gi|158436198|gb|EDP13965.1| hypothetical protein CLOBOL_05846 [Clostridium bolteae ATCC BAA-613] Length = 244 Score = 35.8 bits (81), Expect = 6.8, Method: Compositional matrix adjust. Identities = 18/42 (42%), Positives = 24/42 (57%), Gaps = 1/42 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 R+LDLG G G C+ ++ VGVDIS K LE+A+ Sbjct: 45 RLLDLGCGYGWHCIYAMEHGAV-SAVGVDISGKMLEVAREKT 85 >gi|18977219|ref|NP_578576.1| hypothetical protein PF0847 [Pyrococcus furiosus DSM 3638] gi|18892878|gb|AAL80971.1| hypothetical protein PF0847 [Pyrococcus furiosus DSM 3638] Length = 248 Score = 35.8 bits (81), Expect = 6.8, Method: Compositional matrix adjust. Identities = 43/154 (27%), Positives = 68/154 (44%), Gaps = 14/154 (9%) Query: 102 LDLGTGTGAVCLALLKESPFF--KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 L++GTG A+ +AL+ E FF K ++ + E A+ N N + R Sbjct: 85 LEIGTGHTAM-MALMAEK-FFNCKVTATEVDEEFFEYARRNIERNNSNVRLVKSNGGIIK 142 Query: 160 SV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 V EG FDVI S PPY + LG R R ++ GG G + + HLN Sbjct: 143 GVVEGTFDVIFSAPPYYDK----PLG---RVLTEREAIGGGKYGEEFSVKLLEEAFDHLN 195 Query: 219 KDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKD 252 G ++ + +K ++ + + R + L + KD Sbjct: 196 PGGKVALYLPDKEK--LLNVIKERGIKLGYSVKD 227 >gi|323450126|gb|EGB06009.1| hypothetical protein AURANDRAFT_16878 [Aureococcus anophagefferens] Length = 101 Score = 35.8 bits (81), Expect = 6.8, Method: Compositional matrix adjust. Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 2/56 (3%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 ++D G G +AL E + V VD+ + L++A+ NA GV++R D + +D Sbjct: 46 VIDAFCGCGGNAIALASEGAWV--VAVDVDARKLDMARHNAAIYGVADRIDFVAAD 99 >gi|257051707|ref|YP_003129540.1| methylase [Halorhabdus utahensis DSM 12940] gi|256690470|gb|ACV10807.1| methylase [Halorhabdus utahensis DSM 12940] Length = 204 Score = 35.8 bits (81), Expect = 6.8, Method: Compositional matrix adjust. Identities = 33/122 (27%), Positives = 52/122 (42%), Gaps = 14/122 (11%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R +D+GTG+G V AL + + VG D++ A + A+ + + D +D Sbjct: 50 RAIDVGTGSGYVASALAEAG--VEVVGTDLNPAACQQARDAGIPVARANLLDPFLAD--- 104 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 FD++ NPPY+ S G + + +L GG DG + V R L Sbjct: 105 ----SFDLVTFNPPYLPSTPDTEWGDWM-----QTALSGGEDGRAAVDPFLADVGRVLED 155 Query: 220 DG 221 G Sbjct: 156 GG 157 >gi|291320531|ref|YP_003515795.1| type I restriction modification system Hsdm modification (methylase) protein [Mycoplasma agalactiae] gi|290752866|emb|CBH40841.1| Modification (Methylase) protein of type Irestriction modification system HsdM [Mycoplasma agalactiae] Length = 892 Score = 35.8 bits (81), Expect = 6.9, Method: Composition-based stats. Identities = 32/128 (25%), Positives = 59/128 (46%), Gaps = 25/128 (19%) Query: 68 SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 + + + P +EL+ +A+ L + R+V+++ D +G+G++ + + E + Sbjct: 210 AGEFYTPHEVSELM-SKIVAYHL---KDREVIKVYDPTSGSGSLLITIGHEFKKYNNGDS 265 Query: 128 DISCKALEI-------AKSNAVTNGVS------ERFDTLQSDW-------FSSVEGL-FD 166 +S A E+ + N + +S DTL+ DW FSS + L D Sbjct: 266 PVSYYAQELKTEVFNLTRMNLIMKNISPTEIHARNGDTLEQDWPMFENNDFSSYKHLSVD 325 Query: 167 VIVSNPPY 174 +VSNPPY Sbjct: 326 AVVSNPPY 333 >gi|329900834|ref|ZP_08272602.1| 3-demethylubiquinone-9 3-methyltransferase [Oxalobacteraceae bacterium IMCC9480] gi|327549362|gb|EGF33932.1| 3-demethylubiquinone-9 3-methyltransferase [Oxalobacteraceae bacterium IMCC9480] Length = 253 Score = 35.8 bits (81), Expect = 6.9, Method: Compositional matrix adjust. Identities = 23/91 (25%), Positives = 50/91 (54%), Gaps = 8/91 (8%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LD+G G G + ++ ++ K G+D+S KAL++A +++ G+ R++ + ++ + Sbjct: 71 VLDIGCGGGILAQSMARKG--AKVTGIDLSEKALKVADLHSLEAGIDMRYEMISAENMAE 128 Query: 161 VE-GLFDVI-----VSNPPYIESVIVDCLGL 185 E FDV+ + + P E+++ C L Sbjct: 129 REPASFDVVTCMEMLEHVPDPEAIVRACATL 159 >gi|222528759|ref|YP_002572641.1| Methyltransferase type 11 [Caldicellulosiruptor bescii DSM 6725] gi|222455606|gb|ACM59868.1| Methyltransferase type 11 [Caldicellulosiruptor bescii DSM 6725] Length = 243 Score = 35.8 bits (81), Expect = 6.9, Method: Compositional matrix adjust. Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 1/48 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147 +ILD+G + L LLK F K G+DIS K +E+A AV G+ Sbjct: 42 KILDIGCADAKL-LFLLKRRSFKKLYGIDISAKMIELAFKRAVLKGIK 88 >gi|170077148|ref|YP_001733786.1| SAM-dependent methyltransferase [Synechococcus sp. PCC 7002] gi|169884817|gb|ACA98530.1| SAM-dependent methyltransferase [Synechococcus sp. PCC 7002] Length = 250 Score = 35.8 bits (81), Expect = 6.9, Method: Compositional matrix adjust. Identities = 32/95 (33%), Positives = 46/95 (48%), Gaps = 11/95 (11%) Query: 83 DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142 ++ LA L I+K ++I D+G GTGA L +L E + VD LE+ ++ A Sbjct: 24 ETKLALDLLEIDKTAPLKIADIGCGTGASTL-VLAEQLDAQITAVDFLPDFLEVLETRAK 82 Query: 143 TNGVSERFDTLQSDWFSSVEGL------FDVIVSN 171 +SE+ TL S+E L FDVI S Sbjct: 83 QKELSEKISTL----CCSMENLPFNDAEFDVIWSE 113 >gi|184200118|ref|YP_001854325.1| hypothetical protein KRH_04720 [Kocuria rhizophila DC2201] gi|183580348|dbj|BAG28819.1| hypothetical protein [Kocuria rhizophila DC2201] Length = 576 Score = 35.8 bits (81), Expect = 7.0, Method: Compositional matrix adjust. Identities = 28/91 (30%), Positives = 39/91 (42%), Gaps = 12/91 (13%) Query: 95 KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG--------- 145 +R V LDLGTG G LL + DIS +AL + N + N Sbjct: 187 RRPVATALDLGTGCGIQTFHLLAHAEHV--TATDISERALATTRFNLLLNAPALGLDPEH 244 Query: 146 VSERFDTLQSDWFSSVEGL-FDVIVSNPPYI 175 + +R V G FD++VSNPP++ Sbjct: 245 LEDRVSLELGSMLEPVAGRSFDMVVSNPPFV 275 >gi|169617526|ref|XP_001802177.1| hypothetical protein SNOG_11945 [Phaeosphaeria nodorum SN15] gi|160703427|gb|EAT80357.2| hypothetical protein SNOG_11945 [Phaeosphaeria nodorum SN15] Length = 245 Score = 35.8 bits (81), Expect = 7.0, Method: Compositional matrix adjust. Identities = 45/156 (28%), Positives = 69/156 (44%), Gaps = 31/156 (19%) Query: 72 FEPRPETELLVD-----SALAFSLPRIEKRDVVR--ILDLGTGTGAVC--LALLKESPFF 122 +EP ++ LL+D S AF R + +L++G G+G V +A ES F Sbjct: 16 YEPAEDSYLLLDTLSSPSETAFLRDRFNGESLAPPLVLEVGVGSGVVLAFVAANAESIFG 75 Query: 123 K----GVGVDI---SCKALEIAKSNAVT---NGVSERFDTLQSDWFSSV-EGLFDVIVSN 171 + +G DI +CKA NA+ NG S D + D +++ DV + N Sbjct: 76 RHDVLTLGTDINSFACKAAAQTARNAIKERDNGRSVFLDVVNGDLATAIRPNSVDVFIFN 135 Query: 172 PPYIESVIVDCLGLEVRDF---DPRISLDGGIDGLS 204 PPY+ + E+ DF D ++ GG D S Sbjct: 136 PPYVPA--------ELPDFTRHDQHNAIPGGKDATS 163 >gi|170571310|ref|XP_001891678.1| hypothetical protein [Brugia malayi] gi|158603678|gb|EDP39514.1| conserved hypothetical protein [Brugia malayi] Length = 219 Score = 35.8 bits (81), Expect = 7.0, Method: Compositional matrix adjust. Identities = 22/81 (27%), Positives = 42/81 (51%), Gaps = 4/81 (4%) Query: 97 DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 D + DLG G G + L +K + G+G++I +A+ I ++N + D + D Sbjct: 47 DGCTVADLGCGPGILLLGAVKLGASY-GLGIEIDEEAINICRNNIERCDLGNVVDVICLD 105 Query: 157 W---FSSVEGLFDVIVSNPPY 174 S+++ +FD ++ NPP+ Sbjct: 106 VTKNISALKPIFDTVIMNPPF 126 >gi|124486498|ref|YP_001031114.1| hypothetical protein Mlab_1686 [Methanocorpusculum labreanum Z] gi|124364039|gb|ABN07847.1| Methyltransferase type 11 [Methanocorpusculum labreanum Z] Length = 287 Score = 35.8 bits (81), Expect = 7.0, Method: Compositional matrix adjust. Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 4/86 (4%) Query: 85 ALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN 144 A A LP + ++ ILD+G G G + + + + P G+D+ ++E +K NA Sbjct: 131 AFAEVLPLLSGKN---ILDVGCGLGTLAIKIAEAKPESLVYGIDLLESSVEQSKLNAEVE 187 Query: 145 GVSE-RFDTLQSDWFSSVEGLFDVIV 169 GV+ RF + EG FD +V Sbjct: 188 GVANTRFVVANTYELPFEEGYFDSVV 213 >gi|262273281|ref|ZP_06051096.1| ribosomal protein L11 methyltransferase [Grimontia hollisae CIP 101886] gi|262222654|gb|EEY73964.1| ribosomal protein L11 methyltransferase [Grimontia hollisae CIP 101886] Length = 294 Score = 35.8 bits (81), Expect = 7.0, Method: Compositional matrix adjust. Identities = 34/137 (24%), Positives = 60/137 (43%), Gaps = 26/137 (18%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159 ++D G G+G + K +G+DI +AL+ +K+NA NGV++R + L D Sbjct: 163 VIDFGCGSG-ILSLAALLLGAEKVIGIDIDPQALQASKANAERNGVADRLELYLPKDQPE 221 Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI----------SLDGGIDGLSHYRTI 209 +++ E V+ + L +R+ P I ++ G +D S ++ Sbjct: 222 NLQA------------EVVVANILAGPLRELSPVIKSLIAPQGVLAMSGVLD--SQAESV 267 Query: 210 ADGVSRHLNKDGLCSVE 226 AD LN D + E Sbjct: 268 ADCYRDELNVDAIVEQE 284 >gi|258654059|ref|YP_003203215.1| S-adenosyl-methyltransferase MraW [Nakamurella multipartita DSM 44233] gi|258557284|gb|ACV80226.1| S-adenosyl-methyltransferase MraW [Nakamurella multipartita DSM 44233] Length = 348 Score = 35.8 bits (81), Expect = 7.0, Method: Compositional matrix adjust. Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 1/59 (1%) Query: 97 DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155 DVV ++D G G LALL+ P + VG+D +AL IA+ G+++R + + + Sbjct: 53 DVV-LVDATLGMGGHTLALLQAHPRLRVVGIDRDPQALSIAEQRITAAGLADRVELVHA 110 >gi|332358767|gb|EGJ36590.1| glycerophosphoryl diester phosphodiesterase [Streptococcus sanguinis SK355] Length = 326 Score = 35.8 bits (81), Expect = 7.1, Method: Compositional matrix adjust. Identities = 26/107 (24%), Positives = 48/107 (44%), Gaps = 11/107 (10%) Query: 145 GVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC-----LGLEVRDFDPRISLDGG 199 G+++ FD ++DW S+ + D PY+E+ I LG + +FD ++S D Sbjct: 44 GLAQTFDESKADWDSNTAAMIDPPTH--PYLENTISSMQAAFDLGADAVEFDVKLSKDKQ 101 Query: 200 I----DGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 + D ++T +G + L ++IGY D + + R Sbjct: 102 LAVFHDATLEFKTGIEGEIQDYTMAELKKMDIGYGYTADGGKTYPFR 148 >gi|325293441|ref|YP_004279305.1| ribosomal protein L11 methyltransferase [Agrobacterium sp. H13-3] gi|325061294|gb|ADY64985.1| putative ribosomal protein L11 methyltransferase [Agrobacterium sp. H13-3] Length = 292 Score = 35.8 bits (81), Expect = 7.1, Method: Compositional matrix adjust. Identities = 27/84 (32%), Positives = 40/84 (47%), Gaps = 7/84 (8%) Query: 93 IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS----- 147 + R V LDLGTG+G + +A+ K + DI A+ +A+ N NG+ Sbjct: 147 LRTRTVRNALDLGTGSGVLAIAVRKMR-HIPVLATDIDPIAVRVARENVRLNGIVSGLAL 205 Query: 148 ERFDTLQSDWFSSVEGLFDVIVSN 171 E SD F G FD+I++N Sbjct: 206 ETAPGFHSDAFRKY-GPFDLIIAN 228 >gi|258620656|ref|ZP_05715693.1| ribosomal protein L11 methyltransferase [Vibrio mimicus VM573] gi|258587171|gb|EEW11883.1| ribosomal protein L11 methyltransferase [Vibrio mimicus VM573] Length = 295 Score = 35.8 bits (81), Expect = 7.1, Method: Compositional matrix adjust. Identities = 24/72 (33%), Positives = 41/72 (56%), Gaps = 4/72 (5%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159 ++D G G+G + +A +K K +G+DI +AL +K NA NGV ++ + L D Sbjct: 163 VIDFGCGSGILAIAAIKLG-AAKVIGIDIDPQALLASKDNAARNGVEDQIEVYLPKD--Q 219 Query: 160 SVEGLFDVIVSN 171 + + DV+V+N Sbjct: 220 PEDLVADVVVAN 231 >gi|227540594|ref|ZP_03970643.1| possible SAM-dependent methyltransferase [Sphingobacterium spiritivorum ATCC 33300] gi|227239533|gb|EEI89548.1| possible SAM-dependent methyltransferase [Sphingobacterium spiritivorum ATCC 33300] Length = 197 Score = 35.4 bits (80), Expect = 7.2, Method: Compositional matrix adjust. Identities = 24/82 (29%), Positives = 43/82 (52%), Gaps = 6/82 (7%) Query: 90 LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 P E ++V LDLG G G C+ +++ +GVD+S K + AK N+ + R Sbjct: 38 FPDFEHKNV---LDLGCGYGWHCIYAMQQGASHV-IGVDLSAKMIRKAKENSAGLDIDYR 93 Query: 150 FDTLQSDWFSSVEGLFDVIVSN 171 ++ F++ E FD+++S+ Sbjct: 94 QMAIEDVNFATEE--FDIVISS 113 >gi|295097604|emb|CBK86694.1| 16S rRNA m(2)G 1207 methyltransferase /23S rRNA m(2)G-1835 methyltransferase [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 378 Score = 35.4 bits (80), Expect = 7.2, Method: Compositional matrix adjust. Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 3/78 (3%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN--GVSERFDTLQSDW 157 I+DLG G G + L LL ++P V D S A+ ++ N TN +R + + ++ Sbjct: 231 EIVDLGCGNGVIGLTLLAKNPEASVVFSDESPMAVASSRLNVETNLPEALDRCEFMINNA 290 Query: 158 FSSVEGL-FDVIVSNPPY 174 S VE F+ + NPP+ Sbjct: 291 LSGVEPFRFNAVFCNPPF 308 >gi|317054356|ref|YP_004118381.1| methyltransferase type 12 [Pantoea sp. At-9b] gi|316952351|gb|ADU71825.1| Methyltransferase type 12 [Pantoea sp. At-9b] Length = 330 Score = 35.4 bits (80), Expect = 7.2, Method: Compositional matrix adjust. Identities = 25/97 (25%), Positives = 44/97 (45%), Gaps = 3/97 (3%) Query: 56 GWRDFYNVRLTLSSDTFE--PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113 GW+D + + + + L D+A A + + + R+LD+G G G + + Sbjct: 119 GWQDPLEIETAWADAAMSQIAQEQRALSGDTACAIASELADFQRPARLLDMGGGPGLITV 178 Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150 AL + P GV +D+ K +A+ N G+ RF Sbjct: 179 ALAERFPQLSGVVLDLP-KTASVAQQNIERAGLRGRF 214 >gi|302525418|ref|ZP_07277760.1| methyltransferase-UbiE family protein [Streptomyces sp. AA4] gi|302434313|gb|EFL06129.1| methyltransferase-UbiE family protein [Streptomyces sp. AA4] Length = 271 Score = 35.4 bits (80), Expect = 7.2, Method: Compositional matrix adjust. Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 12/92 (13%) Query: 82 VDSALAFSLPRI-EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140 VD++ A+ P + R V LD+G G G + + L + + VG+D+S LE A+++ Sbjct: 24 VDNSAAYLAPELLPGRSV---LDVGCGPGTITVDLARRVAPGEVVGIDVSETVLEQARAH 80 Query: 141 AVTNGVS----ERFDTLQSDWFSSVEGLFDVI 168 A + GVS ER D + G FDV+ Sbjct: 81 ARSEGVSNVRFERADITA----APAVGRFDVV 108 >gi|229013328|ref|ZP_04170468.1| Biotin biosynthesis protein BioC [Bacillus mycoides DSM 2048] gi|228747921|gb|EEL97786.1| Biotin biosynthesis protein BioC [Bacillus mycoides DSM 2048] Length = 242 Score = 35.4 bits (80), Expect = 7.2, Method: Compositional matrix adjust. Identities = 26/94 (27%), Positives = 43/94 (45%), Gaps = 3/94 (3%) Query: 81 LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140 + S L+ R + +RIL+LG GTG V L P VD + + + +AK+ Sbjct: 1 MAHSLLSTLKERYSETSSIRILELGCGTGYVTEQLSNLFPKAHITAVDFADEMIAVAKTR 60 Query: 141 AVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174 V R + ++ +E +DVI+SN + Sbjct: 61 KSLENVMFRCEDIEQ---LKLENPYDVIISNATF 91 >gi|284031997|ref|YP_003381928.1| type 11 methyltransferase [Kribbella flavida DSM 17836] gi|283811290|gb|ADB33129.1| Methyltransferase type 11 [Kribbella flavida DSM 17836] Length = 251 Score = 35.4 bits (80), Expect = 7.2, Method: Compositional matrix adjust. Identities = 29/101 (28%), Positives = 44/101 (43%), Gaps = 5/101 (4%) Query: 57 WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116 W++ + R L + P E L +L + R R+LDLG G G++ Sbjct: 7 WQE-WQRRWDLQQGNYLPERERTL----SLMLDIIRRTTGPNPRLLDLGCGPGSLLTRAF 61 Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 + P VGVD+ LEIA++ A G+ + D Q W Sbjct: 62 QHLPGGDLVGVDLDPLLLEIARNVAGDRGMFLQADFCQEGW 102 >gi|289209404|ref|YP_003461470.1| ribosomal protein L11 methyltransferase [Thioalkalivibrio sp. K90mix] gi|288945035|gb|ADC72734.1| ribosomal protein L11 methyltransferase [Thioalkalivibrio sp. K90mix] Length = 293 Score = 35.4 bits (80), Expect = 7.2, Method: Compositional matrix adjust. Identities = 31/98 (31%), Positives = 51/98 (52%), Gaps = 9/98 (9%) Query: 75 RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134 P T + + S LA + PR ++ +LD G G+G + +A LK VG DI +A+ Sbjct: 141 HPTTAMCLKS-LAANPPRDQE-----VLDYGCGSGILAIAALKLG-ARHAVGTDIDRQAV 193 Query: 135 EIAKSNAVTNGVSE-RFDTLQSDWFSSVEGLFDVIVSN 171 + SNA N +SE + + +D G FD++++N Sbjct: 194 QATYSNAAANDISEDQIEAGLTDHPVPDAG-FDLVIAN 230 >gi|84489290|ref|YP_447522.1| putative type I restriction-modification system, methyltransferase subunit [Methanosphaera stadtmanae DSM 3091] gi|84372609|gb|ABC56879.1| putative type I restriction-modification system, methyltransferase subunit [Methanosphaera stadtmanae DSM 3091] Length = 508 Score = 35.4 bits (80), Expect = 7.2, Method: Compositional matrix adjust. Identities = 20/80 (25%), Positives = 44/80 (55%), Gaps = 8/80 (10%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS------ERFDTLQ 154 + D G+G++ L + KE+ + G +++ +A+ N + +GV ++ D+L+ Sbjct: 217 VYDPTCGSGSLLLRVSKEADVSEFYGQELNQTTYNLARMNMILHGVKYNHFNIKQGDSLE 276 Query: 155 SDWFSSVEGLFDVIVSNPPY 174 +D ++ FD +V+NPP+ Sbjct: 277 NDRHEELK--FDAVVANPPF 294 >gi|260435757|ref|ZP_05789727.1| 23S rRNA (uracil-5-)-methyltransferase [Synechococcus sp. WH 8109] gi|260413631|gb|EEX06927.1| 23S rRNA (uracil-5-)-methyltransferase [Synechococcus sp. WH 8109] Length = 465 Score = 35.4 bits (80), Expect = 7.3, Method: Compositional matrix adjust. Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 7/92 (7%) Query: 60 FYNVRLTLSSDTFEP--RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117 F ++L LSS TF P+ E +V + L + R++D G G + L L K Sbjct: 280 FCGIKLALSSTTFVQVNTPQAERIVQRLTDWLLVQCAG---ARVVDAYCGVGTIALPLSK 336 Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 F G++++ ++E A+ NA+ NG+S R Sbjct: 337 AG--FNVQGLELNPDSVEQARLNAMHNGLSSR 366 >gi|229168862|ref|ZP_04296580.1| Biotin biosynthesis protein BioC [Bacillus cereus AH621] gi|228614592|gb|EEK71699.1| Biotin biosynthesis protein BioC [Bacillus cereus AH621] Length = 242 Score = 35.4 bits (80), Expect = 7.3, Method: Compositional matrix adjust. Identities = 26/94 (27%), Positives = 43/94 (45%), Gaps = 3/94 (3%) Query: 81 LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140 + S L+ R + +RIL+LG GTG V L P VD + + + +AK+ Sbjct: 1 MAHSLLSTLKERYSETSSIRILELGCGTGYVTEQLSNLFPKAHITAVDFADEMIAVAKTR 60 Query: 141 AVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174 V R + ++ +E +DVI+SN + Sbjct: 61 KSLENVMFRCEDIEQ---LKLENPYDVIISNATF 91 >gi|323454084|gb|EGB09954.1| hypothetical protein AURANDRAFT_62435 [Aureococcus anophagefferens] Length = 539 Score = 35.4 bits (80), Expect = 7.3, Method: Compositional matrix adjust. Identities = 25/58 (43%), Positives = 36/58 (62%), Gaps = 5/58 (8%) Query: 86 LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAV 142 LA SLP KR V +D+G GTG +C A L+++ P + VGVD+S + L+ A+ V Sbjct: 357 LARSLP---KRPGVVAVDVGAGTG-LCGAALRDALPIEEIVGVDVSPRMLDAAREKGV 410 >gi|254580057|ref|XP_002496014.1| ZYRO0C08470p [Zygosaccharomyces rouxii] gi|238938905|emb|CAR27081.1| ZYRO0C08470p [Zygosaccharomyces rouxii] Length = 227 Score = 35.4 bits (80), Expect = 7.3, Method: Compositional matrix adjust. Identities = 31/109 (28%), Positives = 48/109 (44%), Gaps = 15/109 (13%) Query: 55 LGWRDFYNVRLTLSSDTFEPRPE-----------TELLVDSALAFSLPRIEKRDVVRILD 103 LG +++++ L + FE PE E + S L ++ I D Sbjct: 12 LGTKEYWDEFYALEKNNFENNPEDTGECWFDDNDAEAKMVSFLEDNIGMHHIEHGCSICD 71 Query: 104 LGTGTGAVCLALLKESPFFKG--VGVDISCKALEIAKSNAVTNGVSERF 150 LGTG G + L++ F G +GVD S +++E AK A T G+ F Sbjct: 72 LGTGNGHLLFELVESG--FNGPMLGVDYSEQSIEFAKEVAQTKGLPVEF 118 >gi|229491934|ref|ZP_04385754.1| methyltransferase domain protein [Rhodococcus erythropolis SK121] gi|229321147|gb|EEN86948.1| methyltransferase domain protein [Rhodococcus erythropolis SK121] Length = 378 Score = 35.4 bits (80), Expect = 7.3, Method: Compositional matrix adjust. Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 1/75 (1%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 ++DLG G+G + A+ ++ P + D S A+ A + A NGV +R L+ D SS Sbjct: 237 VIDLGCGSGILAAAIARKFPDVHVIATDQSSAAVASALATASANGVGDRVSGLRDDAVSS 296 Query: 161 VEGL-FDVIVSNPPY 174 + D+++ NPP+ Sbjct: 297 LPSASADLVLLNPPF 311 >gi|206577246|ref|YP_002236326.1| ribosomal protein L11 methyltransferase [Klebsiella pneumoniae 342] gi|288933314|ref|YP_003437373.1| ribosomal protein L11 methyltransferase [Klebsiella variicola At-22] gi|290511635|ref|ZP_06551004.1| 50S ribosomal protein L11 methyltransferase [Klebsiella sp. 1_1_55] gi|226710090|sp|B5XND9|PRMA_KLEP3 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11 Mtase gi|206566304|gb|ACI08080.1| ribosomal protein L11 methyltransferase [Klebsiella pneumoniae 342] gi|288888043|gb|ADC56361.1| ribosomal protein L11 methyltransferase [Klebsiella variicola At-22] gi|289776628|gb|EFD84627.1| 50S ribosomal protein L11 methyltransferase [Klebsiella sp. 1_1_55] Length = 293 Score = 35.4 bits (80), Expect = 7.3, Method: Compositional matrix adjust. Identities = 26/72 (36%), Positives = 44/72 (61%), Gaps = 4/72 (5%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159 ++D G G+G + +A LK K +G+DI +A++ ++ NA NGVSER + L D Sbjct: 162 VIDFGCGSGILAIAALKLG-AAKAIGIDIDPQAIQASRDNAQRNGVSERLELYLPQDQPE 220 Query: 160 SVEGLFDVIVSN 171 +++ DV+V+N Sbjct: 221 AMKA--DVVVAN 230 >gi|110750216|ref|XP_624562.2| PREDICTED: methyltransferase-like protein 10-like [Apis mellifera] Length = 221 Score = 35.4 bits (80), Expect = 7.3, Method: Compositional matrix adjust. Identities = 20/56 (35%), Positives = 34/56 (60%), Gaps = 3/56 (5%) Query: 92 RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147 ++ K D +I+D+G G G + L K+ F K +G+D S KA+++A+ + N VS Sbjct: 59 KLNKND--KIIDIGCGNGMTLIELAKQG-FEKLMGIDYSQKAVDLAREVSKENNVS 111 >gi|52424588|ref|YP_087725.1| ribosomal protein L11 methyltransferase [Mannheimia succiniciproducens MBEL55E] gi|60390343|sp|Q65V70|PRMA_MANSM RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11 Mtase gi|52306640|gb|AAU37140.1| PrmA protein [Mannheimia succiniciproducens MBEL55E] Length = 293 Score = 35.4 bits (80), Expect = 7.3, Method: Compositional matrix adjust. Identities = 17/50 (34%), Positives = 32/50 (64%), Gaps = 1/50 (2%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150 ++D G G+G + +A LK + +G+DI +A+ +++NA NGV++R Sbjct: 162 VIDFGCGSGILAIAALKLGAK-EAIGIDIDPQAILASRNNAEQNGVADRL 210 >gi|313888736|ref|ZP_07822400.1| conserved hypothetical protein [Peptoniphilus harei ACS-146-V-Sch2b] gi|312845294|gb|EFR32691.1| conserved hypothetical protein [Peptoniphilus harei ACS-146-V-Sch2b] Length = 376 Score = 35.4 bits (80), Expect = 7.4, Method: Compositional matrix adjust. Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 1/55 (1%) Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS-SVEGLFDVIVSNPPYIESV 178 + D+S KA++IAK+NA G+ E Q D + + VI++NPPY E + Sbjct: 256 LASDVSHKAIQIAKANAEILGLDEDISFFQKDIRDLDLPDDYGVIITNPPYGERI 310 >gi|322417812|ref|YP_004197035.1| 50S ribosomal protein L11 methyltransferase [Geobacter sp. M18] gi|320124199|gb|ADW11759.1| ribosomal protein L11 methyltransferase [Geobacter sp. M18] Length = 306 Score = 35.4 bits (80), Expect = 7.4, Method: Compositional matrix adjust. Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 6/73 (8%) Query: 101 ILDLGTGTG--AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 +LD+GTG+G ++ ALL + VDI +A+ + + N NGV++R +D Sbjct: 175 VLDVGTGSGVLSIAAALLGATEI---TAVDIDPEAVRVTQENLELNGVADRVTASTTDLS 231 Query: 159 SSVEGLFDVIVSN 171 EG F V+V+N Sbjct: 232 RLPEG-FAVVVAN 243 >gi|268592183|ref|ZP_06126404.1| ribosomal RNA small subunit methyltransferase [Providencia rettgeri DSM 1131] gi|291312585|gb|EFE53038.1| ribosomal RNA small subunit methyltransferase [Providencia rettgeri DSM 1131] Length = 337 Score = 35.4 bits (80), Expect = 7.4, Method: Compositional matrix adjust. Identities = 32/113 (28%), Positives = 53/113 (46%), Gaps = 8/113 (7%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LDL G G + L ++P K D+S AL+ A S N ++ + + SD +S Sbjct: 200 LLDLACGNGVIAAVLGSQNPELKLTLSDVSASALDSAASTLEANKLAG--EIIASDAYSD 257 Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFD-PRISLDGGIDGLSHYRTIADG 212 + FD I+SNPP+ + + +E + P+ GG H R +A+ Sbjct: 258 INDKFDWIISNPPFHDGLNTSYRAVENMIYQAPKYLKKGG-----HLRIVANA 305 >gi|198435713|ref|XP_002131256.1| PREDICTED: similar to hepatocellular carcinoma-associated antigen 137 [Ciona intestinalis] Length = 787 Score = 35.4 bits (80), Expect = 7.4, Method: Compositional matrix adjust. Identities = 38/155 (24%), Positives = 67/155 (43%), Gaps = 17/155 (10%) Query: 105 GTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL 164 G+G A+ A E K + +DI LE AK NA GV +R D + +F L Sbjct: 595 GSGGNAIQFAFTCE----KVLAIDIDPVKLENAKHNAAIYGVEDRIDFICGSFFDIAPTL 650 Query: 165 -FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS----RHLNK 219 D++ +PP+ +C + + D G + + I+D ++ R+ N Sbjct: 651 KADIVFLSPPWGGPEYTNCETYSIAEMG-----DFGTKAFTLAKNISDNIAFFLPRNSNV 705 Query: 220 DGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYG 254 D L + G +V++ + + K+ + A+ YG Sbjct: 706 DELVCL-AGPGNQVELEQNMLNNKIVTITAY--YG 737 >gi|120402772|ref|YP_952601.1| methyltransferase small [Mycobacterium vanbaalenii PYR-1] gi|119955590|gb|ABM12595.1| methyltransferase small [Mycobacterium vanbaalenii PYR-1] Length = 505 Score = 35.4 bits (80), Expect = 7.4, Method: Compositional matrix adjust. Identities = 56/198 (28%), Positives = 87/198 (43%), Gaps = 23/198 (11%) Query: 37 FLTNAIVRSLKHESIHRIL-------GWRDFYNVRLTLSSDTFEPRPETELLVDSALAFS 89 + N +V +S+ L G RDF V S+ P +L + S Sbjct: 92 LIDNGVVEPAGPDSVRAALDIRPHSDGARDFLVVSDQDSALRSGPVRHDHVLGIGGASVS 151 Query: 90 LPR-IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148 L + + V R LDLGTG G L L ++ + V D + +AL +A + A NG+S Sbjct: 152 LAHAVVRSPVGRALDLGTGCGIQALHL--DAHCDEVVATDTNPRALALAAATARLNGMS- 208 Query: 149 RFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207 +D F V G FD+IVSNPP++ +G D+ I D G+ G + + Sbjct: 209 -WDLRCGSLFEPVAGERFDLIVSNPPFV-------VGTGSLDY---IYRDSGMVGDALCQ 257 Query: 208 TIADGVSRHLNKDGLCSV 225 ++ + V+ HL G + Sbjct: 258 SMIEQVADHLEPGGTAQI 275 >gi|81428998|ref|YP_395998.1| putative methyltransferase [Lactobacillus sakei subsp. sakei 23K] gi|78610640|emb|CAI55691.1| Putative methyltransferase [Lactobacillus sakei subsp. sakei 23K] Length = 243 Score = 35.4 bits (80), Expect = 7.4, Method: Compositional matrix adjust. Identities = 28/71 (39%), Positives = 35/71 (49%), Gaps = 5/71 (7%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+L+L G G LA+L + VG+D+S + L IA A GVS F LQ D Sbjct: 35 RVLELACGAGD--LAILLKQAGLDVVGLDLSTEMLTIASEKATEAGVS--FPLLQGDMLD 90 Query: 160 SVE-GLFDVIV 169 E G FD I Sbjct: 91 LSEVGTFDAIT 101 >gi|84496883|ref|ZP_00995737.1| hypothetical protein JNB_05150 [Janibacter sp. HTCC2649] gi|84383651|gb|EAP99532.1| hypothetical protein JNB_05150 [Janibacter sp. HTCC2649] Length = 207 Score = 35.4 bits (80), Expect = 7.4, Method: Compositional matrix adjust. Identities = 36/145 (24%), Positives = 67/145 (46%), Gaps = 9/145 (6%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R LD+G G G + L L S + + VD++ +++++ NA T + + D Sbjct: 69 RFLDIGCGWGPIALTLGLLSEHAEVLAVDVNERSVDLTNRNATTLDLPH-VTAVTPDAVD 127 Query: 160 SVEGLFDVIVSNPPYI--ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217 S +D+I SNPP ++ + D L L + PR++ DG + +D + R + Sbjct: 128 S-NATYDLIWSNPPIRIGKAALHDLLHLWL----PRLAPDGTAYLVVQRNLGSDSLQRWI 182 Query: 218 NKD-GLCSVEIGYNQKVDVVRIFES 241 D G+ N+ V+++ +S Sbjct: 183 ESDLGMPCARFATNKGFRVLKVDKS 207 >gi|332159341|ref|YP_004424620.1| hypothetical protein PNA2_1702 [Pyrococcus sp. NA2] gi|331034804|gb|AEC52616.1| hypothetical protein PNA2_1702 [Pyrococcus sp. NA2] Length = 384 Score = 35.4 bits (80), Expect = 7.5, Method: Compositional matrix adjust. Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 7/84 (8%) Query: 92 RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF- 150 R++++ V I D+ G G + K + +GVDI +E AK NA GV+ F Sbjct: 78 RLKEQGVKSIADVSCGVGIQLIFFAKHG--IRAIGVDIDPLKIEFAKRNAEKYGVNVEFL 135 Query: 151 --DTLQSDWFSSVEGLFDVIVSNP 172 D+L + ++ DVI S+P Sbjct: 136 VGDSLSEEIVEKIDA--DVIFSDP 157 >gi|330718881|ref|ZP_08313481.1| ribosomal protein L11 methyltransferase [Leuconostoc fallax KCTC 3537] Length = 297 Score = 35.4 bits (80), Expect = 7.5, Method: Compositional matrix adjust. Identities = 30/117 (25%), Positives = 58/117 (49%), Gaps = 19/117 (16%) Query: 60 FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR----ILDLGTGTGAVCLAL 115 F N L+ + T P T+L++ + VVR +LD+GTG+G + +A Sbjct: 125 FLNPELSFGTGT---HPTTKLMLQAL----------ETVVRGGETMLDIGTGSGVLSIA- 170 Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSN 171 K+ + + D+ A+++A+ N + N +++ + SD + V+ D+IV+N Sbjct: 171 AKQLGVAQILATDVDDDAVQVARDNLLVNPIAQDVKVIVSDLMAGVDSAPVDLIVAN 227 >gi|326202198|ref|ZP_08192068.1| amino acid adenylation domain protein [Clostridium papyrosolvens DSM 2782] gi|325987993|gb|EGD48819.1| amino acid adenylation domain protein [Clostridium papyrosolvens DSM 2782] Length = 3205 Score = 35.4 bits (80), Expect = 7.5, Method: Composition-based stats. Identities = 33/118 (27%), Positives = 54/118 (45%), Gaps = 11/118 (9%) Query: 59 DFYNVRLTLSSDTFEPRPETEL--LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116 D +N+ +SS E E E+ +D+A+ RI+ + R+L++G GTG + L+ Sbjct: 2262 DSFNIAGWMSSYNGEQISELEMREWLDTAIG----RIKALNPKRVLEIGCGTGMLLFRLI 2317 Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW--FSSVEG-LFDVIVSN 171 + + +G DIS K LE A V + L F + G FD ++ N Sbjct: 2318 DKCESY--MGTDISTKILEYVAKVAKNKEVHHKLTLLNKSAHDFKEISGNKFDTVIIN 2373 >gi|226307758|ref|YP_002767718.1| hypothetical protein RER_42710 [Rhodococcus erythropolis PR4] gi|226186875|dbj|BAH34979.1| conserved hypothetical protein [Rhodococcus erythropolis PR4] Length = 378 Score = 35.4 bits (80), Expect = 7.5, Method: Compositional matrix adjust. Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 1/75 (1%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 ++DLG G+G + A+ ++ P + D S A+ A + A NGV +R L+ D SS Sbjct: 237 VIDLGCGSGILAAAIARKFPDVHVIATDQSSAAVASALATATANGVGDRVSGLRDDAVSS 296 Query: 161 VEGL-FDVIVSNPPY 174 + D+++ NPP+ Sbjct: 297 LPSASADLVLLNPPF 311 >gi|168207083|ref|ZP_02633088.1| type I restriction-modification system, M subunit [Clostridium perfringens E str. JGS1987] gi|170661530|gb|EDT14213.1| type I restriction-modification system, M subunit [Clostridium perfringens E str. JGS1987] Length = 514 Score = 35.4 bits (80), Expect = 7.5, Method: Compositional matrix adjust. Identities = 21/84 (25%), Positives = 42/84 (50%), Gaps = 4/84 (4%) Query: 95 KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS-ERFDTL 153 K D+ + D G+G++ L + +E+ G +++ +A+ N + +GV FD Sbjct: 221 KTDLKNVYDPTCGSGSLLLRVSREANVRTFYGQELTSTTYNLARMNMLLHGVRYSDFDIK 280 Query: 154 QSDWFSSVEGL---FDVIVSNPPY 174 D + + + F+ +V+NPPY Sbjct: 281 NDDTLENPQHIDLRFEAVVANPPY 304 >gi|315081960|gb|EFT53936.1| precorrin-6Y C5,15-methyltransferase, CbiT subunit [Propionibacterium acnes HL078PA1] Length = 198 Score = 35.4 bits (80), Expect = 7.6, Method: Compositional matrix adjust. Identities = 19/68 (27%), Positives = 36/68 (52%), Gaps = 1/68 (1%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+ DLGTG G++ + + P + +G++ + A++NA + +FD + +D Sbjct: 47 RLWDLGTGAGSIAVEWCRTDPTCRAIGLERKAERAANARTNASELTLPGQFDVIDADLAK 106 Query: 160 SV-EGLFD 166 + EGL D Sbjct: 107 GLPEGLPD 114 >gi|307264218|ref|ZP_07545809.1| Ribosomal protein L11 methyltransferase [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|306870464|gb|EFN02217.1| Ribosomal protein L11 methyltransferase [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 316 Score = 35.4 bits (80), Expect = 7.6, Method: Compositional matrix adjust. Identities = 23/72 (31%), Positives = 41/72 (56%), Gaps = 4/72 (5%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159 ++D G G+G + +A LK + +G+DI +A+ + +NA NGV++R L D Sbjct: 185 VIDFGCGSGILAIAALKLGAK-QAIGIDIDPQAILASGNNAEANGVADRLQLFLAKDQPQ 243 Query: 160 SVEGLFDVIVSN 171 ++ DV+V+N Sbjct: 244 DLQA--DVVVAN 253 >gi|156355073|ref|XP_001623499.1| predicted protein [Nematostella vectensis] gi|156210207|gb|EDO31399.1| predicted protein [Nematostella vectensis] Length = 252 Score = 35.4 bits (80), Expect = 7.6, Method: Compositional matrix adjust. Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 3/78 (3%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 ++ L++G G GA+ + + P + DI+ A+E NA +GV+ +Q+D F Sbjct: 75 LKFLEVGAGMGAIAIEFALQVPQAEVWATDINPAAVEDVAENACLHGVANSVTAIQADVF 134 Query: 159 --SSVEGL-FDVIVSNPP 173 ++G+ FD+I P Sbjct: 135 DCDGLKGMKFDMIFFRQP 152 >gi|282934675|ref|ZP_06339918.1| ribosomal protein L11 methyltransferase [Lactobacillus jensenii 208-1] gi|281301250|gb|EFA93551.1| ribosomal protein L11 methyltransferase [Lactobacillus jensenii 208-1] Length = 315 Score = 35.4 bits (80), Expect = 7.7, Method: Compositional matrix adjust. Identities = 20/73 (27%), Positives = 39/73 (53%), Gaps = 1/73 (1%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 ++LD+GTG+G + +A K DIS +A+ A N N ++ ++++ Sbjct: 178 AKVLDVGTGSGILAIAASKLGAESVLATTDISDEAVTAANENIALNKLN-NIKVIKANLL 236 Query: 159 SSVEGLFDVIVSN 171 ++ G FD+I++N Sbjct: 237 KNINGKFDLILAN 249 >gi|262281141|ref|ZP_06058923.1| ribosomal RNA small subunit methyltransferase C [Acinetobacter calcoaceticus RUH2202] gi|262257372|gb|EEY76108.1| ribosomal RNA small subunit methyltransferase C [Acinetobacter calcoaceticus RUH2202] Length = 337 Score = 35.4 bits (80), Expect = 7.7, Method: Compositional matrix adjust. Identities = 34/135 (25%), Positives = 54/135 (40%), Gaps = 3/135 (2%) Query: 47 KHESIHRILGWRDFYNVRLTLSSDTFEPRPE--TELLVDSALAFSLPRIEKRDVVRILDL 104 K E I + W Y+V++ T P ++ +D A LP + + RI D Sbjct: 142 KTEKIKPLESWLKTYSVQINEQELTICALPGVFSQNHLDVGTAVLLPYLNQVKSGRIADF 201 Query: 105 GTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV-SERFDTLQSDWFSSVEG 163 G G G + L K + +DI AL + NG+ S++ + Sbjct: 202 GCGAGIISCYLAKINSSNIIHALDIDAFALRSTEMTFSRNGIGSDQLRLQPVIGIADAPT 261 Query: 164 LFDVIVSNPPYIESV 178 D IVSNPP+ + + Sbjct: 262 ELDAIVSNPPFHQGI 276 >gi|225016608|ref|ZP_03705800.1| hypothetical protein CLOSTMETH_00515 [Clostridium methylpentosum DSM 5476] gi|224950572|gb|EEG31781.1| hypothetical protein CLOSTMETH_00515 [Clostridium methylpentosum DSM 5476] Length = 184 Score = 35.4 bits (80), Expect = 7.7, Method: Compositional matrix adjust. Identities = 33/117 (28%), Positives = 58/117 (49%), Gaps = 13/117 (11%) Query: 75 RPETELLVD---SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131 RP T+ + + S + F LP +LDL G+G + + L F V VD S Sbjct: 27 RPTTDRVKEGIFSIIQFDLPG------ANVLDLFAGSGQLGIEALSRGAKF-CVFVDSSR 79 Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFSSVEG---LFDVIVSNPPYIESVIVDCLGL 185 + E+ K N T G+ ++ + S+ S + G +FD+++ +PPY +++I L + Sbjct: 80 ASHEVEKENLKTVGLFKQSRVVLSEAESFLAGTKEVFDIVLLDPPYNQNLIPPVLEM 136 >gi|30022018|ref|NP_833649.1| methyltransferase [Bacillus cereus ATCC 14579] gi|218232815|ref|YP_002368730.1| putative methyltransferase [Bacillus cereus B4264] gi|228960191|ref|ZP_04121848.1| Methyltransferase [Bacillus thuringiensis serovar pakistani str. T13001] gi|229047614|ref|ZP_04193204.1| Methyltransferase [Bacillus cereus AH676] gi|229111399|ref|ZP_04240952.1| Methyltransferase [Bacillus cereus Rock1-15] gi|229129207|ref|ZP_04258180.1| Methyltransferase [Bacillus cereus BDRD-Cer4] gi|229146501|ref|ZP_04274872.1| Methyltransferase [Bacillus cereus BDRD-ST24] gi|229152128|ref|ZP_04280322.1| Methyltransferase [Bacillus cereus m1550] gi|296504424|ref|YP_003666124.1| methyltransferase [Bacillus thuringiensis BMB171] gi|29897574|gb|AAP10850.1| Methyltransferase [Bacillus cereus ATCC 14579] gi|218160772|gb|ACK60764.1| putative methyltransferase [Bacillus cereus B4264] gi|228631320|gb|EEK87955.1| Methyltransferase [Bacillus cereus m1550] gi|228637134|gb|EEK93593.1| Methyltransferase [Bacillus cereus BDRD-ST24] gi|228654444|gb|EEL10309.1| Methyltransferase [Bacillus cereus BDRD-Cer4] gi|228672175|gb|EEL27466.1| Methyltransferase [Bacillus cereus Rock1-15] gi|228723861|gb|EEL75216.1| Methyltransferase [Bacillus cereus AH676] gi|228799459|gb|EEM46419.1| Methyltransferase [Bacillus thuringiensis serovar pakistani str. T13001] gi|296325476|gb|ADH08404.1| methyltransferase [Bacillus thuringiensis BMB171] Length = 188 Score = 35.4 bits (80), Expect = 7.7, Method: Compositional matrix adjust. Identities = 26/90 (28%), Positives = 45/90 (50%), Gaps = 7/90 (7%) Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 LDL G+G + + L K + VD KA+++ N + V E+ + ++D +V Sbjct: 46 LDLFGGSGGLGIEALSRG-IDKAIFVDRDSKAIKVIHQNLESCRVQEQAEVYRNDAERAV 104 Query: 162 EGL------FDVIVSNPPYIESVIVDCLGL 185 + L FD+I+ +PPY E IV + + Sbjct: 105 KALIKREMSFDLILIDPPYKEQKIVSLISI 134 >gi|291520682|emb|CBK75903.1| Methylase involved in ubiquinone/menaquinone biosynthesis [Butyrivibrio fibrisolvens 16/4] Length = 263 Score = 35.4 bits (80), Expect = 7.7, Method: Compositional matrix adjust. Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 6/81 (7%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCK-----ALEIAKSNAVTNGVSE-RFDTL 153 + LD+G G+GA+ +A K++P + VG+D K + + ++NA GVS F Sbjct: 98 KCLDVGCGSGALTIACAKKNPNAEFVGIDRWGKEYASFSKNLCENNAKAEGVSNVSFGQG 157 Query: 154 QSDWFSSVEGLFDVIVSNPPY 174 + S V+ FD + SN Y Sbjct: 158 DATKLSFVDETFDAVTSNYVY 178 >gi|257056486|ref|YP_003134318.1| S-adenosyl-methyltransferase MraW [Saccharomonospora viridis DSM 43017] gi|256586358|gb|ACU97491.1| S-adenosyl-methyltransferase MraW [Saccharomonospora viridis DSM 43017] Length = 327 Score = 35.4 bits (80), Expect = 7.7, Method: Compositional matrix adjust. Identities = 29/103 (28%), Positives = 44/103 (42%), Gaps = 6/103 (5%) Query: 80 LLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKS 139 +LVD L P + RD + ++D G G ALL P + +G+D +ALE ++ Sbjct: 19 VLVDRVLELFEPAVSDRDAI-LVDTTLGLGGHTEALLSAYPRLRVIGLDRDPEALERSRR 77 Query: 140 NAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182 G +F D V DV P +E V++D Sbjct: 78 RLARYGSRVQFVHTVYDRIRDVLAELDV-----PAVEGVLMDL 115 >gi|261342547|ref|ZP_05970405.1| ribosomal RNA small subunit methyltransferase D [Enterobacter cancerogenus ATCC 35316] gi|288315189|gb|EFC54127.1| ribosomal RNA small subunit methyltransferase D [Enterobacter cancerogenus ATCC 35316] Length = 378 Score = 35.4 bits (80), Expect = 7.7, Method: Compositional matrix adjust. Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 3/78 (3%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN--GVSERFDTLQSDW 157 I+DLG G G + L LL ++P V D S A+ ++ N TN +R + + ++ Sbjct: 231 EIVDLGCGNGVIGLTLLAKNPDASVVFSDESPMAVASSRLNVETNMPDALDRCEFMINNA 290 Query: 158 FSSVEGL-FDVIVSNPPY 174 S VE F+ + NPP+ Sbjct: 291 LSGVEPFRFNAVFCNPPF 308 >gi|78356477|ref|YP_387926.1| 50S ribosomal protein L11P methyltransferase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78218882|gb|ABB38231.1| [LSU ribosomal protein L11P]-lysine N-methyltransferase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 283 Score = 35.4 bits (80), Expect = 7.7, Method: Compositional matrix adjust. Identities = 27/79 (34%), Positives = 41/79 (51%), Gaps = 14/79 (17%) Query: 99 VRILDLGTGTG--AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 +R LDLGTG+G + A+L GVG DI A+E N N VS++F+ Sbjct: 151 MRFLDLGTGSGILGIGCAMLG----LSGVGSDIDLLAVENTTENKEINNVSDKFEVR--- 203 Query: 157 WFSSVEGL----FDVIVSN 171 SVE + +D++++N Sbjct: 204 -LGSVEAVQGEQYDLVLAN 221 >gi|85708852|ref|ZP_01039918.1| ribosomal protein L11 methylase [Erythrobacter sp. NAP1] gi|85690386|gb|EAQ30389.1| ribosomal protein L11 methylase [Erythrobacter sp. NAP1] Length = 306 Score = 35.4 bits (80), Expect = 7.7, Method: Compositional matrix adjust. Identities = 22/60 (36%), Positives = 30/60 (50%), Gaps = 2/60 (3%) Query: 90 LPRIEKRDVV--RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147 L ++ R +V I D+GTGTG + A +K P K DI E+ NA NGV+ Sbjct: 141 LSAMKSRGIVARNIADIGTGTGLLGFAAMKLWPGAKATASDIDAICAEVVDVNAGLNGVN 200 >gi|307250814|ref|ZP_07532743.1| Ribosomal protein L11 methyltransferase [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306857173|gb|EFM89300.1| Ribosomal protein L11 methyltransferase [Actinobacillus pleuropneumoniae serovar 4 str. M62] Length = 316 Score = 35.4 bits (80), Expect = 7.8, Method: Compositional matrix adjust. Identities = 23/72 (31%), Positives = 41/72 (56%), Gaps = 4/72 (5%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159 ++D G G+G + +A LK + +G+DI +A+ + +NA NGV++R L D Sbjct: 185 VIDFGCGSGILAIAALKLGAK-QAIGIDIDPQAILASGNNAEANGVADRLQLFLAKDQPQ 243 Query: 160 SVEGLFDVIVSN 171 ++ DV+V+N Sbjct: 244 DLQA--DVVVAN 253 >gi|331085862|ref|ZP_08334945.1| hypothetical protein HMPREF0987_01248 [Lachnospiraceae bacterium 9_1_43BFAA] gi|330406785|gb|EGG86290.1| hypothetical protein HMPREF0987_01248 [Lachnospiraceae bacterium 9_1_43BFAA] Length = 238 Score = 35.4 bits (80), Expect = 7.8, Method: Compositional matrix adjust. Identities = 19/67 (28%), Positives = 38/67 (56%) Query: 97 DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 D + + D+GT G + +AL++E + V +DI+ L+ A+++ +SE+ DT +SD Sbjct: 17 DGMVVADVGTDHGYIPIALVQEGRCPRAVAMDINIGPLDRARAHIQAAELSEKIDTRRSD 76 Query: 157 WFSSVEG 163 ++ Sbjct: 77 GMKELKA 83 >gi|307257608|ref|ZP_07539368.1| Ribosomal protein L11 methyltransferase [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306863911|gb|EFM95834.1| Ribosomal protein L11 methyltransferase [Actinobacillus pleuropneumoniae serovar 10 str. D13039] Length = 316 Score = 35.4 bits (80), Expect = 7.8, Method: Compositional matrix adjust. Identities = 23/72 (31%), Positives = 41/72 (56%), Gaps = 4/72 (5%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159 ++D G G+G + +A LK + +G+DI +A+ + +NA NGV++R L D Sbjct: 185 VIDFGCGSGILAIAALKLGAK-QAIGIDIDPQAILASGNNAEANGVADRLQLFLAKDQPQ 243 Query: 160 SVEGLFDVIVSN 171 ++ DV+V+N Sbjct: 244 DLQA--DVVVAN 253 >gi|259047392|ref|ZP_05737793.1| methyltransferase [Granulicatella adiacens ATCC 49175] gi|259035583|gb|EEW36838.1| methyltransferase [Granulicatella adiacens ATCC 49175] Length = 254 Score = 35.4 bits (80), Expect = 7.8, Method: Compositional matrix adjust. Identities = 27/98 (27%), Positives = 43/98 (43%), Gaps = 7/98 (7%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141 +D+ L I +R I+DL +G GAV LL V+I + ++A Sbjct: 35 LDAVLLADFATIAERRKANIVDLCSGNGAVAF-LLSHKTTNPITAVEIQEQLYDMAMRTT 93 Query: 142 VTNGVSERFDTLQSDWFSSVEGLF-----DVIVSNPPY 174 NG+ +R + D +++G+ D I NPPY Sbjct: 94 QLNGLEDRITFIHQD-IRNLKGIIPKDSVDFITCNPPY 130 >gi|157363161|ref|YP_001469928.1| methyltransferase small [Thermotoga lettingae TMO] gi|157313765|gb|ABV32864.1| methyltransferase small [Thermotoga lettingae TMO] Length = 228 Score = 35.4 bits (80), Expect = 7.8, Method: Compositional matrix adjust. Identities = 22/86 (25%), Positives = 44/86 (51%), Gaps = 9/86 (10%) Query: 95 KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154 K+D ++++LG TG VC + + + VG+D + +A+ N + + D + Sbjct: 43 KKDQRKVIELGCATGVVCAYIASKYNRYV-VGIDKDPDLIHLAQRTIQMNNLYGKVDLVN 101 Query: 155 ------SDWFSSVEGLFDVIVSNPPY 174 S +F++ FD+++SNPP+ Sbjct: 102 ISCKDVSKFFAAES--FDMVISNPPH 125 >gi|156084978|ref|XP_001609972.1| hypothetical protein [Babesia bovis T2Bo] gi|154797224|gb|EDO06404.1| conserved hypothetical protein [Babesia bovis] Length = 229 Score = 35.4 bits (80), Expect = 7.8, Method: Compositional matrix adjust. Identities = 29/122 (23%), Positives = 52/122 (42%), Gaps = 23/122 (18%) Query: 77 ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK----------------ESP 120 E L AL + I ++++ ++++G G+G + +K P Sbjct: 29 EDTFLFIEALENDIDYILSKNMLCVMEIGCGSGYISTYFIKLLQRCGKLSPDAGSHRTIP 88 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-----EGLFDVIVSNPPYI 175 F + VDI+ A N V ER DT+ +D F + + + D+++ NPPY+ Sbjct: 89 FV--ITVDINPAATMATVETLERNKVVERADTMTADMFLPLLPQRSQEVLDMVMFNPPYV 146 Query: 176 ES 177 S Sbjct: 147 PS 148 >gi|85711852|ref|ZP_01042907.1| Ribosomal protein L11 methylase [Idiomarina baltica OS145] gi|85694249|gb|EAQ32192.1| Ribosomal protein L11 methylase [Idiomarina baltica OS145] Length = 293 Score = 35.4 bits (80), Expect = 7.8, Method: Compositional matrix adjust. Identities = 21/72 (29%), Positives = 41/72 (56%), Gaps = 3/72 (4%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 +I+D G G+G + +A LK +G+DI +AL + NA N V+++FD + Sbjct: 161 QIVDFGCGSGILGIAALKLG-SAHALGIDIDKQALISTQENAERNHVADKFDVYLPEQHP 219 Query: 160 SVEGLFDVIVSN 171 +++ D++++N Sbjct: 220 NLQA--DIVLAN 229 >gi|116747715|ref|YP_844402.1| type 11 methyltransferase [Syntrophobacter fumaroxidans MPOB] gi|116696779|gb|ABK15967.1| Methyltransferase type 11 [Syntrophobacter fumaroxidans MPOB] Length = 279 Score = 35.4 bits (80), Expect = 7.8, Method: Compositional matrix adjust. Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 6/80 (7%) Query: 96 RDVVRILDLGTGTGAVC-LALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE---RFD 151 R+ +LDLG+G G C LA K P + +GVD++ + + A+ NA+ G + RF Sbjct: 78 REGETVLDLGSGAGFDCFLAAAKVGPSGRVIGVDMTPEMIAKAQENALKGGYANTEFRFG 137 Query: 152 TLQSDWFSSVEGLFDVIVSN 171 +++ + DVIVSN Sbjct: 138 EIEN--LPVEDSSVDVIVSN 155 >gi|228477190|ref|ZP_04061828.1| methyltransferase [Streptococcus salivarius SK126] gi|228251209|gb|EEK10380.1| methyltransferase [Streptococcus salivarius SK126] Length = 254 Score = 35.4 bits (80), Expect = 7.9, Method: Compositional matrix adjust. Identities = 27/103 (26%), Positives = 51/103 (49%), Gaps = 11/103 (10%) Query: 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCL--ALLKESPFFKGVGVDISCKALEIAKS 139 +DS L P+I K+ + I+DL +G GAV L + E+P V++ + ++AK Sbjct: 33 IDSVLLSRFPKIPKKGL--IVDLCSGNGAVGLFASTRTEAPI---TLVELQERLADMAKR 87 Query: 140 NAVTNGVSERFDTLQSDWFS----SVEGLFDVIVSNPPYIESV 178 + N + ++ + D + + D+I+ NPPY ++ Sbjct: 88 SVTLNQLEDQVSVVNDDLKNLLDHAPRSQVDLILCNPPYFKAT 130 >gi|237745481|ref|ZP_04575961.1| 23S rRNA 5-methyluridine methyltransferase [Oxalobacter formigenes HOxBLS] gi|229376832|gb|EEO26923.1| 23S rRNA 5-methyluridine methyltransferase [Oxalobacter formigenes HOxBLS] Length = 451 Score = 35.4 bits (80), Expect = 8.0, Method: Compositional matrix adjust. Identities = 31/95 (32%), Positives = 45/95 (47%), Gaps = 14/95 (14%) Query: 87 AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146 A L IEK D RI DL G G L + + + + VG++ S E AK +A+ NG+ Sbjct: 287 AIRLLEIEKND--RIADLFCGLGNFSLPIARHA--AEVVGIEGSEILTERAKESALLNGL 342 Query: 147 SER--------FDTLQSDWFSSVEGLFDVIVSNPP 173 E+ F+ DW G FD ++ +PP Sbjct: 343 EEKTRFETRNLFEMTVKDWIGL--GPFDKVLIDPP 375 >gi|50914743|ref|YP_060715.1| methyltransferase [Streptococcus pyogenes MGAS10394] gi|50903817|gb|AAT87532.1| Methyltransferase [Streptococcus pyogenes MGAS10394] Length = 384 Score = 35.4 bits (80), Expect = 8.0, Method: Compositional matrix adjust. Identities = 22/58 (37%), Positives = 35/58 (60%), Gaps = 3/58 (5%) Query: 126 GVDISCKALEIAKSNAVTNGVSE--RFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181 G DI + +EIAKSNA G+S+ F ++ F + + + V++SNPPY E ++ D Sbjct: 261 GFDIDGRMIEIAKSNAEEAGLSDVITFKQMRLQDFRT-DKINGVVISNPPYGERLLDD 317 >gi|256789367|ref|ZP_05527798.1| hypothetical protein SlivT_33188 [Streptomyces lividans TK24] Length = 410 Score = 35.4 bits (80), Expect = 8.0, Method: Compositional matrix adjust. Identities = 22/76 (28%), Positives = 41/76 (53%), Gaps = 1/76 (1%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R++DLG G G V A+ P + + D S +A+ A++ N V+ + + D + Sbjct: 269 RVVDLGCGNGVVGTAVALADPDAELLFTDESFQAVASARATYRANEVAGQAEFRVGDGLA 328 Query: 160 SV-EGLFDVIVSNPPY 174 V +G D++++NPP+ Sbjct: 329 GVPDGSVDLVLNNPPF 344 >gi|154496468|ref|ZP_02035164.1| hypothetical protein BACCAP_00760 [Bacteroides capillosus ATCC 29799] gi|150274551|gb|EDN01628.1| hypothetical protein BACCAP_00760 [Bacteroides capillosus ATCC 29799] Length = 325 Score = 35.4 bits (80), Expect = 8.0, Method: Compositional matrix adjust. Identities = 21/60 (35%), Positives = 35/60 (58%), Gaps = 1/60 (1%) Query: 96 RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155 +D ++LDLG G+G + +A L + GVDI KA+ +A NA NG+ + T+++ Sbjct: 180 KDGDQVLDLGCGSGILSIAALCLGAKY-AFGVDIDPKAVGVAYENAEMNGIGKDIYTVRA 238 >gi|114771196|ref|ZP_01448616.1| ribosomal protein L11 methyltransferase, putative [alpha proteobacterium HTCC2255] gi|114548121|gb|EAU51008.1| ribosomal protein L11 methyltransferase, putative [alpha proteobacterium HTCC2255] Length = 289 Score = 35.4 bits (80), Expect = 8.0, Method: Compositional matrix adjust. Identities = 31/111 (27%), Positives = 54/111 (48%), Gaps = 20/111 (18%) Query: 80 LLVDSALAF-------------SLPRIEKRDVV--RILDLGTGTGAVCLALLKESPFFKG 124 LL+++A+AF +L ++ K + I+D+G GT + +A P K Sbjct: 116 LLIEAAMAFGTGHHGTTKGCLTALDKLVKTGFIGKNIVDIGCGTAVLAMAAALCWPG-KV 174 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSN 171 + DI A E +K+NA+ N +S+R D + F E +D+I++N Sbjct: 175 LASDIDEIATETSKANAIANDLSDRIDVITCAGFDHPELRAAAPYDLILAN 225 >gi|332559004|ref|ZP_08413326.1| ribosomal L11 methyltransferase [Rhodobacter sphaeroides WS8N] gi|332276716|gb|EGJ22031.1| ribosomal L11 methyltransferase [Rhodobacter sphaeroides WS8N] Length = 291 Score = 35.4 bits (80), Expect = 8.1, Method: Compositional matrix adjust. Identities = 20/77 (25%), Positives = 39/77 (50%), Gaps = 4/77 (5%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 ++ D+G GT + +A + P + + DI A+E+A++N NG+ R L++ F Sbjct: 150 AKVADVGCGTAVLAMAAARVFPEAQVLASDIDEVAVEVAEANVAINGLDGRVACLEAAGF 209 Query: 159 S----SVEGLFDVIVSN 171 + FD++ +N Sbjct: 210 DHPDIAAAAPFDLVFAN 226 >gi|325964616|ref|YP_004242522.1| methyltransferase family protein [Arthrobacter phenanthrenivorans Sphe3] gi|323470703|gb|ADX74388.1| methyltransferase family protein [Arthrobacter phenanthrenivorans Sphe3] Length = 545 Score = 35.4 bits (80), Expect = 8.1, Method: Compositional matrix adjust. Identities = 28/91 (30%), Positives = 38/91 (41%), Gaps = 12/91 (13%) Query: 95 KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG--------- 145 +R R LDLGTG G LL DIS +AL + N + N Sbjct: 183 RRHTERALDLGTGCGVQAFHLLHHCEHV--TATDISERALAFTRFNILLNAEALSVDPAR 240 Query: 146 VSERFDTLQSDWFSSVEG-LFDVIVSNPPYI 175 ++ER V G F ++VSNPP++ Sbjct: 241 LAERVSLRLGSLLDPVAGEEFGLVVSNPPFV 271 >gi|294506164|ref|YP_003570222.1| RNA methylase family UPF0020 [Salinibacter ruber M8] gi|294342492|emb|CBH23270.1| Putative RNA methylase family UPF0020 [Salinibacter ruber M8] Length = 247 Score = 35.4 bits (80), Expect = 8.1, Method: Compositional matrix adjust. Identities = 19/60 (31%), Positives = 34/60 (56%), Gaps = 1/60 (1%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 ++DLG+G G + +A + +G+GV+I + + A+ NA GVS+ + Q D F + Sbjct: 104 VIDLGSGDGRIPIAAAQRH-GARGIGVEIDPELIAKARENAEAAGVSDLVEFRQGDLFEA 162 >gi|139473312|ref|YP_001128027.1| RNA methylase family protein [Streptococcus pyogenes str. Manfredo] gi|134271558|emb|CAM29782.1| putative RNA methylase family protein [Streptococcus pyogenes str. Manfredo] Length = 384 Score = 35.4 bits (80), Expect = 8.1, Method: Compositional matrix adjust. Identities = 22/58 (37%), Positives = 35/58 (60%), Gaps = 3/58 (5%) Query: 126 GVDISCKALEIAKSNAVTNGVSE--RFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181 G DI + +EIAKSNA G+S+ F ++ F + + + V++SNPPY E ++ D Sbjct: 261 GFDIDGRMIEIAKSNAEEAGLSDVITFKQMRLQDFRT-DKINGVVISNPPYGERLLDD 317 >gi|77464128|ref|YP_353632.1| 50S ribosomal protein L11P methyltransferase [Rhodobacter sphaeroides 2.4.1] gi|77388546|gb|ABA79731.1| LSU ribosomal protein L11P methyltransferase [Rhodobacter sphaeroides 2.4.1] Length = 291 Score = 35.4 bits (80), Expect = 8.1, Method: Compositional matrix adjust. Identities = 20/77 (25%), Positives = 39/77 (50%), Gaps = 4/77 (5%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 ++ D+G GT + +A + P + + DI A+E+A++N NG+ R L++ F Sbjct: 150 AKVADVGCGTAVLAMAAARVFPEAQVLASDIDEVAVEVAEANVAINGLDGRVACLEAAGF 209 Query: 159 S----SVEGLFDVIVSN 171 + FD++ +N Sbjct: 210 DHPDIAAAAPFDLVFAN 226 >gi|51246614|ref|YP_066498.1| hypothetical protein DP2762 [Desulfotalea psychrophila LSv54] gi|50877651|emb|CAG37491.1| hypothetical protein DP2762 [Desulfotalea psychrophila LSv54] Length = 210 Score = 35.4 bits (80), Expect = 8.1, Method: Compositional matrix adjust. Identities = 24/57 (42%), Positives = 32/57 (56%), Gaps = 1/57 (1%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV-TNGVSERFDTLQSD 156 ILDLG G G LLK ++ GVD+S + +E+AK NA TN + T+ SD Sbjct: 48 ILDLGCGPGNNANFLLKADRGYQIEGVDLSAQMIELAKKNAPDTNFRVQDIRTITSD 104 >gi|296123150|ref|YP_003630928.1| methyltransferase type 11 [Planctomyces limnophilus DSM 3776] gi|296015490|gb|ADG68729.1| Methyltransferase type 11 [Planctomyces limnophilus DSM 3776] Length = 240 Score = 35.4 bits (80), Expect = 8.2, Method: Compositional matrix adjust. Identities = 29/100 (29%), Positives = 45/100 (45%), Gaps = 9/100 (9%) Query: 74 PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133 PR T + AL+ SLP ILD+GTGT + L + + + VD+S Sbjct: 48 PRDATTPVFTPALSTSLPPT-------ILDVGTGTARIPLEFCLQVDWGHILAVDLSPAM 100 Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFS--SVEGLFDVIVSN 171 LEIA+ N + +R Q+ + F +++SN Sbjct: 101 LEIAQENVHASSYRDRITLRQTTTTPLLAEAARFQIVMSN 140 >gi|195941222|ref|ZP_03086604.1| hypothetical protein EscherichcoliO157_33337 [Escherichia coli O157:H7 str. EC4024] Length = 336 Score = 35.4 bits (80), Expect = 8.2, Method: Compositional matrix adjust. Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 3/78 (3%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN--GVSERFDTLQSDW 157 I+DLG G G + L LL ++P V D S A+ ++ N TN +R + + ++ Sbjct: 231 EIVDLGCGNGVIGLTLLAKNPEASVVFSDESPMAVASSRLNVETNMPDALDRCEFMINNA 290 Query: 158 FSSVEGL-FDVIVSNPPY 174 S VE F+ + NPP+ Sbjct: 291 LSGVEPFRFNAVFCNPPF 308 >gi|194709257|pdb|3DMF|A Chain A, T. Thermophilus 16s Rrna N2 G1207 Methyltransferase (Rsmc) In Complex With Adomet gi|194709258|pdb|3DMG|A Chain A, T. Thermophilus 16s Rrna N2 G1207 Methyltransferase (Rsmc) In Complex With Adohcy gi|194709259|pdb|3DMH|A Chain A, T. Thermophilus 16s Rrna N2 G1207 Methyltransferase (Rsmc) In Complex With Adomet And Guanosine Length = 381 Score = 35.4 bits (80), Expect = 8.2, Method: Compositional matrix adjust. Identities = 42/133 (31%), Positives = 63/133 (47%), Gaps = 25/133 (18%) Query: 57 WRDFYNVRLTLSSDTFEPRPE--TELLVDSALAFSLPRIEKR---DVVR---ILDLGTGT 108 WR F + R+ + TF P + VD A L +++R + VR +LDLG G Sbjct: 186 WRAF-SARILGAEYTFHHLPGVFSAGKVDPASLLLLEALQERLGPEGVRGRQVLDLGAGY 244 Query: 109 GAVCLALLKESPFFKGVGVDISC-----KALEIAKSNAVTNGVSERFDTLQSDWFSSV-- 161 GA+ L L + GV D++ K LE +NA+ + L SD ++ Sbjct: 245 GALTLPLARMGAEVVGVEDDLASVLSLQKGLE---ANAL------KAQALHSDVDEALTE 295 Query: 162 EGLFDVIVSNPPY 174 E FD+IV+NPP+ Sbjct: 296 EARFDIIVTNPPF 308 >gi|16579865|gb|AAL26680.1| unknown [Staphylococcus aureus] Length = 111 Score = 35.4 bits (80), Expect = 8.2, Method: Compositional matrix adjust. Identities = 26/82 (31%), Positives = 39/82 (47%), Gaps = 3/82 (3%) Query: 90 LPRIEKRDVVRILDLGTGTGAVCLALLKE-SPFFKGVGVDISCKALEIAKSNAVTNGVSE 148 L R + + +R+LD+G TG V + K + VGVD++ L+IA N N VS Sbjct: 12 LDRAQIEEGMRVLDIGCATGEVTQLIAKRVGANGEVVGVDVNESLLKIANENNQYNNVSY 71 Query: 149 RFDTLQSDWFSSVEGLFDVIVS 170 ++ + G FD IV Sbjct: 72 QYSDIYH--LPDTMGHFDAIVG 91 >gi|55980502|ref|YP_143799.1| ribosomal RNA small subunit methyltransferase [Thermus thermophilus HB8] gi|262118483|pdb|2ZUL|A Chain A, Crystal Structure Of Thermus Thermophilus 16s Rrna Methyltransferase Rsmc (Ttha0533) In Complex With Cofactor S-Adenosyl-L-Methionine gi|281500681|pdb|2ZWV|A Chain A, Crystal Structure Of Thermus Thermophilus 16s Rrna Methyltransferase Rsmc (Ttha0533) gi|55771915|dbj|BAD70356.1| probable ribosomal RNA small subunit methyltransferase [Thermus thermophilus HB8] Length = 375 Score = 35.4 bits (80), Expect = 8.2, Method: Compositional matrix adjust. Identities = 42/133 (31%), Positives = 63/133 (47%), Gaps = 25/133 (18%) Query: 57 WRDFYNVRLTLSSDTFEPRPE--TELLVDSALAFSLPRIEKR---DVVR---ILDLGTGT 108 WR F + R+ + TF P + VD A L +++R + VR +LDLG G Sbjct: 186 WRAF-SARILGAEYTFHHLPGVFSAGKVDPASLLLLEALQERLGPEGVRGRQVLDLGAGY 244 Query: 109 GAVCLALLKESPFFKGVGVDISC-----KALEIAKSNAVTNGVSERFDTLQSDWFSSV-- 161 GA+ L L + GV D++ K LE +NA+ + L SD ++ Sbjct: 245 GALTLPLARMGAEVVGVEDDLASVLSLQKGLE---ANAL------KAQALHSDVDEALTE 295 Query: 162 EGLFDVIVSNPPY 174 E FD+IV+NPP+ Sbjct: 296 EARFDIIVTNPPF 308 >gi|312218222|emb|CBX98168.1| similar to RNA methylase family protein [Leptosphaeria maculans] Length = 263 Score = 35.4 bits (80), Expect = 8.2, Method: Compositional matrix adjust. Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 8/80 (10%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW--- 157 I+D G G +AL + + + G++ K L+ AK NA GV + L+ D Sbjct: 75 IIDAFAGVGGNAIALARSGRWDRVFGIEKDAKTLKCAKHNAEIYGVGGKIFWLEGDCFEV 134 Query: 158 ---FSSVEGLFDVIVSNPPY 174 F EGL V+ ++PP+ Sbjct: 135 MRRFKGTEGL--VVFASPPW 152 >gi|297572137|ref|YP_003697911.1| rRNA (guanine-N(2)-)-methyltransferase [Arcanobacterium haemolyticum DSM 20595] gi|296932484|gb|ADH93292.1| rRNA (guanine-N(2)-)-methyltransferase [Arcanobacterium haemolyticum DSM 20595] Length = 368 Score = 35.4 bits (80), Expect = 8.2, Method: Compositional matrix adjust. Identities = 28/85 (32%), Positives = 39/85 (45%), Gaps = 10/85 (11%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LD G G GAV ALL+ F DIS A+E K V E D + W +S Sbjct: 230 VLDFGCGNGAVSRALLEAGIGFV-CATDISADAVESTKLTLV-----EYKDRVDVSWDTS 283 Query: 161 VEGLFD----VIVSNPPYIESVIVD 181 + + D ++ NPP+ + VD Sbjct: 284 AQCMGDESVGAVLLNPPFHDGFAVD 308 >gi|169350578|ref|ZP_02867516.1| hypothetical protein CLOSPI_01346 [Clostridium spiroforme DSM 1552] gi|169292898|gb|EDS75031.1| hypothetical protein CLOSPI_01346 [Clostridium spiroforme DSM 1552] Length = 226 Score = 35.4 bits (80), Expect = 8.2, Method: Compositional matrix adjust. Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 3/70 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LDLG G G C + + +G+DIS K LE+AK+ + R ++ FS Sbjct: 29 VLDLGCGYGWHCKYAIDNGARY-VLGIDISKKILEVAKNKNNDKKIDYRCIAMEDLSFS- 86 Query: 161 VEGLFDVIVS 170 + +FD+I+S Sbjct: 87 -KNIFDIIIS 95 >gi|46198473|ref|YP_004140.1| ribosomal RNA small subunit methyltransferase C [Thermus thermophilus HB27] gi|46196095|gb|AAS80513.1| ribosomal RNA small subunit methyltransferase C [Thermus thermophilus HB27] Length = 375 Score = 35.4 bits (80), Expect = 8.2, Method: Compositional matrix adjust. Identities = 42/133 (31%), Positives = 63/133 (47%), Gaps = 25/133 (18%) Query: 57 WRDFYNVRLTLSSDTFEPRPE--TELLVDSALAFSLPRIEKR---DVVR---ILDLGTGT 108 WR F + R+ + TF P + VD A L +++R + VR +LDLG G Sbjct: 186 WRAF-SARILGAEYTFHHLPGVFSAGKVDPASLLLLEALQERLGPEGVRGRQVLDLGAGY 244 Query: 109 GAVCLALLKESPFFKGVGVDISC-----KALEIAKSNAVTNGVSERFDTLQSDWFSSV-- 161 GA+ L L + GV D++ K LE +NA+ + L SD ++ Sbjct: 245 GALTLPLARMGAEVVGVEDDLASVLSLQKGLE---ANAL------KAQALHSDVDEALTE 295 Query: 162 EGLFDVIVSNPPY 174 E FD+IV+NPP+ Sbjct: 296 EARFDIIVTNPPF 308 >gi|325519062|gb|EGC98560.1| ubiquinone/menaquinone biosynthesis methylase-like protein [Burkholderia sp. TJI49] Length = 209 Score = 35.4 bits (80), Expect = 8.3, Method: Compositional matrix adjust. Identities = 20/51 (39%), Positives = 31/51 (60%), Gaps = 1/51 (1%) Query: 101 ILDLGTGTGAVCLALLKE-SPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150 +LD+G GTGAV LA+ + + GVDIS + ++ A+ A +G+ RF Sbjct: 52 VLDVGCGTGAVTLAIAQRLGADAQCTGVDISARMIDAARVRAERSGLPVRF 102 >gi|229061790|ref|ZP_04199123.1| Biotin biosynthesis protein BioC [Bacillus cereus AH603] gi|229134926|ref|ZP_04263733.1| Biotin biosynthesis protein BioC [Bacillus cereus BDRD-ST196] gi|228648601|gb|EEL04629.1| Biotin biosynthesis protein BioC [Bacillus cereus BDRD-ST196] gi|228717536|gb|EEL69200.1| Biotin biosynthesis protein BioC [Bacillus cereus AH603] Length = 242 Score = 35.4 bits (80), Expect = 8.3, Method: Compositional matrix adjust. Identities = 26/94 (27%), Positives = 43/94 (45%), Gaps = 3/94 (3%) Query: 81 LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140 + S L+ R + +RIL+LG GTG V L P VD + + + +AK+ Sbjct: 1 MAHSLLSTLKERYSETSSIRILELGCGTGYVTEQLSNLFPKAHITAVDFADEMIAVAKTR 60 Query: 141 AVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174 V R + ++ +E +DVI+SN + Sbjct: 61 KSLGNVMFRCEDIEQ---LKLENPYDVIISNATF 91 >gi|124485044|ref|YP_001029660.1| methyltransferase [Methanocorpusculum labreanum Z] gi|124362585|gb|ABN06393.1| methyltransferase [Methanocorpusculum labreanum Z] Length = 200 Score = 35.4 bits (80), Expect = 8.3, Method: Compositional matrix adjust. Identities = 36/105 (34%), Positives = 54/105 (51%), Gaps = 16/105 (15%) Query: 74 PRP-ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL--ALLKESPFFKGVGVDIS 130 P P LL ++ALA + + + ++DLG GTG + + ALL S GVDI Sbjct: 29 PAPLAARLLHEAALAGDI------EGMTVVDLGCGTGMLSIGAALLGAS----VTGVDID 78 Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPY 174 AL+IA+ NA GV + ++ D + E L D ++ NPP+ Sbjct: 79 EAALKIARKNAEKFGVDIEWLRMRID--ETAEPLSADTVLMNPPF 121 >gi|145219132|ref|YP_001129841.1| Mg-protoporphyrin IX methyl transferase [Prosthecochloris vibrioformis DSM 265] gi|145205296|gb|ABP36339.1| magnesium protoporphyrin O-methyltransferase [Chlorobium phaeovibrioides DSM 265] Length = 232 Score = 35.4 bits (80), Expect = 8.3, Method: Compositional matrix adjust. Identities = 21/69 (30%), Positives = 37/69 (53%), Gaps = 3/69 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 ILD G GTG + + K ++ DI+ + +E K++A GV+++ + + + S Sbjct: 69 ILDAGCGTGLFTIRIAKAG--YRVKAADIASQMVEKTKTDATAAGVADKIE-FEVNSIES 125 Query: 161 VEGLFDVIV 169 V G FD +V Sbjct: 126 VSGSFDAVV 134 >gi|284166016|ref|YP_003404295.1| hypothetical protein Htur_2749 [Haloterrigena turkmenica DSM 5511] gi|284015671|gb|ADB61622.1| protein of unknown function Met10 [Haloterrigena turkmenica DSM 5511] Length = 326 Score = 35.4 bits (80), Expect = 8.4, Method: Compositional matrix adjust. Identities = 32/108 (29%), Positives = 48/108 (44%), Gaps = 14/108 (12%) Query: 79 ELLVDSALAFSLPRI--EKRDVVR-------ILDLGTGTGAVCLALLKESPFFKGVGVDI 129 E L+D A + PR+ E+ VV + D+ G G + K + VGVD+ Sbjct: 147 EFLLDLAEVYFSPRLATERNRVVEQVTADEHVFDMFAGVGPFVIPFAKRG--AECVGVDV 204 Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSD---WFSSVEGLFDVIVSNPPY 174 + +A++ + NA NGV +R D EG D IV N P+ Sbjct: 205 NPEAIDYLRENARRNGVEDRVTATCDDVREVAPGYEGWADRIVMNLPH 252 >gi|302559331|ref|ZP_07311673.1| transferase [Streptomyces griseoflavus Tu4000] gi|302476949|gb|EFL40042.1| transferase [Streptomyces griseoflavus Tu4000] Length = 509 Score = 35.4 bits (80), Expect = 8.4, Method: Compositional matrix adjust. Identities = 36/132 (27%), Positives = 54/132 (40%), Gaps = 16/132 (12%) Query: 95 KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154 + V LDLGTG+G L + + D++ +AL I +G + + Sbjct: 166 RTPVASALDLGTGSGIQALHATRH--VTRVTATDVNPRALHITALTLALSGAPA-AELRE 222 Query: 155 SDWFSSV--EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212 F+ V + +D+IVSNPP+ VI L R DGG+ G RT+ Sbjct: 223 GSLFTPVRDDETYDLIVSNPPF---VISPGARLTYR--------DGGMGGDDLCRTLVQE 271 Query: 213 VSRHLNKDGLCS 224 LN+ G Sbjct: 272 SGERLNEGGFAQ 283 >gi|209559781|ref|YP_002286253.1| hypothetical protein Spy49_1275c [Streptococcus pyogenes NZ131] gi|209540982|gb|ACI61558.1| hypothetical protein Spy49_1275c [Streptococcus pyogenes NZ131] Length = 384 Score = 35.4 bits (80), Expect = 8.4, Method: Compositional matrix adjust. Identities = 22/58 (37%), Positives = 35/58 (60%), Gaps = 3/58 (5%) Query: 126 GVDISCKALEIAKSNAVTNGVSE--RFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181 G DI + +EIAKSNA G+S+ F ++ F + + + V++SNPPY E ++ D Sbjct: 261 GFDIDGRMIEIAKSNAEEAGLSDVITFKQMRLQDFRT-DKINGVVISNPPYGERLLDD 317 >gi|161528965|ref|YP_001582791.1| methyltransferase type 11 [Nitrosopumilus maritimus SCM1] gi|160340266|gb|ABX13353.1| Methyltransferase type 11 [Nitrosopumilus maritimus SCM1] Length = 344 Score = 35.4 bits (80), Expect = 8.4, Method: Compositional matrix adjust. Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 3/83 (3%) Query: 90 LPRIEK-RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148 +P EK +++LD+G G+G + K P G D S +A++ AK+ A G+S Sbjct: 154 IPTYEKLHSGLKVLDVGCGSGRAINLMAKSFPNSHFTGYDFSSEAIQNAKNEAQKLGLSN 213 Query: 149 -RFDTLQSDWFSSVEGLFDVIVS 170 F+ + F S E FDVI + Sbjct: 214 VTFEKQDAANFDS-ENSFDVITA 235 >gi|325269116|ref|ZP_08135736.1| TrmA family RNA methyltransferase [Prevotella multiformis DSM 16608] gi|324988503|gb|EGC20466.1| TrmA family RNA methyltransferase [Prevotella multiformis DSM 16608] Length = 474 Score = 35.4 bits (80), Expect = 8.5, Method: Compositional matrix adjust. Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 10/80 (12%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF-------DTL 153 + DL TGTG + + ++ K +G++ +A+E AK N+ N +S D L Sbjct: 331 VYDLYTGTGTIANFVAGKAR--KVIGIEYVPEAIEDAKVNSEINNISNTLFYAGDMKDIL 388 Query: 154 QSDWFSSVEGLFDVIVSNPP 173 D F S +G DVI+++PP Sbjct: 389 TED-FISRQGRPDVIITDPP 407 >gi|256375632|ref|YP_003099292.1| methyltransferase small [Actinosynnema mirum DSM 43827] gi|255919935|gb|ACU35446.1| methyltransferase small [Actinosynnema mirum DSM 43827] Length = 498 Score = 35.4 bits (80), Expect = 8.5, Method: Compositional matrix adjust. Identities = 36/104 (34%), Positives = 49/104 (47%), Gaps = 6/104 (5%) Query: 74 PRPETELLVDSALAFSLPR-IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCK 132 P P +L + SL R +R V +LDLGTG G L + + D+S + Sbjct: 132 PVPTDHVLGVGHASISLARATSRRPVKTLLDLGTGCGVQALHAGRHAERI--TATDLSAR 189 Query: 133 ALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYI 175 AL +A + N V R Q +WF V G FD IV NPP++ Sbjct: 190 ALALASATFRMNEVDVRLG--QGEWFGPVRGRKFDQIVCNPPFV 231 >gi|190150867|ref|YP_001969392.1| ribosomal protein L11 methyltransferase [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|226705030|sp|B3GYL9|PRMA_ACTP7 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11 Mtase gi|189915998|gb|ACE62250.1| ribosomal protein L11 methyltransferase [Actinobacillus pleuropneumoniae serovar 7 str. AP76] Length = 293 Score = 35.4 bits (80), Expect = 8.5, Method: Compositional matrix adjust. Identities = 23/72 (31%), Positives = 41/72 (56%), Gaps = 4/72 (5%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159 ++D G G+G + +A LK + +G+DI +A+ + +NA NGV++R L D Sbjct: 162 VIDFGCGSGILAIAALKLGAK-QAIGIDIDPQAILASGNNAEANGVADRLQLFLAKDQPQ 220 Query: 160 SVEGLFDVIVSN 171 ++ DV+V+N Sbjct: 221 DLQA--DVVVAN 230 >gi|145297996|ref|YP_001140837.1| ribosomal protein L11 methyltransferase [Aeromonas salmonicida subsp. salmonicida A449] gi|166223393|sp|A4SJL7|PRMA_AERS4 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11 Mtase gi|142850768|gb|ABO89089.1| ribosomal protein L11 methyltransferase [Aeromonas salmonicida subsp. salmonicida A449] Length = 292 Score = 35.4 bits (80), Expect = 8.5, Method: Compositional matrix adjust. Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 4/72 (5%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159 ++D G G+G + +A LK + +G+DI +A++ + NA NGV+ + + L +D Sbjct: 160 VVDFGCGSGILGIAALKLG-AARVIGIDIDPQAIQASHDNAERNGVAGQIELYLPADQPQ 218 Query: 160 SVEGLFDVIVSN 171 VE DV+V+N Sbjct: 219 DVEA--DVVVAN 228 >gi|126462971|ref|YP_001044085.1| ribosomal L11 methyltransferase [Rhodobacter sphaeroides ATCC 17029] gi|126104635|gb|ABN77313.1| LSU ribosomal protein L11P methyltransferase [Rhodobacter sphaeroides ATCC 17029] Length = 291 Score = 35.4 bits (80), Expect = 8.5, Method: Compositional matrix adjust. Identities = 20/77 (25%), Positives = 39/77 (50%), Gaps = 4/77 (5%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 ++ D+G GT + +A + P + + DI A+E+A++N NG+ R L++ F Sbjct: 150 AKVADVGCGTAVLAMAAARVFPEAQVLASDIDEVAVEVAEANVAINGLDGRVACLEAAGF 209 Query: 159 S----SVEGLFDVIVSN 171 + FD++ +N Sbjct: 210 DHPDIAAAAPFDLVFAN 226 >gi|291286905|ref|YP_003503721.1| Methyltransferase type 11 [Denitrovibrio acetiphilus DSM 12809] gi|290884065|gb|ADD67765.1| Methyltransferase type 11 [Denitrovibrio acetiphilus DSM 12809] Length = 251 Score = 35.4 bits (80), Expect = 8.5, Method: Compositional matrix adjust. Identities = 32/103 (31%), Positives = 55/103 (53%), Gaps = 12/103 (11%) Query: 83 DSALAFSLPRIEKRDV----VRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIA 137 D+ A + +I+K+ + + ILD+G G+G + L K++ K V G+DIS + L I Sbjct: 27 DAFEAEVIYKIQKQGIDLTKMSILDVGCGSGKFTIGLGKKA---KDVHGIDISDEMLRIL 83 Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGL--FDVIV-SNPPYIES 177 ++ GV+ T Q+DW S ++ FD++ S P + S Sbjct: 84 TEDSANEGVN-NITTQQTDWESYIKKPESFDIVFCSTTPAVRS 125 >gi|212638680|ref|YP_002315200.1| ribosomal protein L11 methyltransferase [Anoxybacillus flavithermus WK1] gi|226707856|sp|B7GKD0|PRMA_ANOFW RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11 Mtase gi|212560160|gb|ACJ33215.1| Ribosomal protein L11 methylase [Anoxybacillus flavithermus WK1] Length = 312 Score = 35.4 bits (80), Expect = 8.5, Method: Compositional matrix adjust. Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 30/141 (21%) Query: 56 GWRDFYNV-----RLTL--SSDTFEPRPETELLV--DSALAFSL--------------PR 92 W+ +YN R T+ + +T+EP EL++ D +AF Sbjct: 113 AWKKYYNPVKISERFTIVPTWETYEPVSSDELIIELDPGMAFGTGTHPTTVMCIQALEKT 172 Query: 93 IEKRDVVRILDLGTGTG--AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150 ++K D V +D+GTG+G ++ A+L +D+ A+E AK N N V + Sbjct: 173 VKKGDTV--VDVGTGSGILSIAAAMLGAKRVH---ALDLDPVAVESAKLNVKLNKVHDVV 227 Query: 151 DTLQSDWFSSVEGLFDVIVSN 171 Q++ ++ DVIV+N Sbjct: 228 TVSQNNLLDRMDEQADVIVAN 248 >gi|157165717|ref|YP_001466729.1| methyltransferase small domain-containing protein [Campylobacter concisus 13826] gi|112800176|gb|EAT97520.1| methyltransferase small [Campylobacter concisus 13826] Length = 235 Score = 35.4 bits (80), Expect = 8.5, Method: Compositional matrix adjust. Identities = 29/80 (36%), Positives = 42/80 (52%), Gaps = 11/80 (13%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL-----EIAKSNAVTNGVSERFDTLQ 154 R+LD+G G G + L L ++ FK + D+S L EI+ NA +N + R T Sbjct: 33 RVLDVGAGCGILGLLLKRD---FKKI--DLSMLDLLELNSEISSFNAKSNCLEARAITAD 87 Query: 155 SDWFSSVEGLFDVIVSNPPY 174 F E FD+I+SNPP+ Sbjct: 88 FANFKDSEK-FDLIISNPPF 106 >gi|85860335|ref|YP_462537.1| methyltransferase [Syntrophus aciditrophicus SB] gi|85723426|gb|ABC78369.1| methyltransferase [Syntrophus aciditrophicus SB] Length = 207 Score = 35.4 bits (80), Expect = 8.5, Method: Compositional matrix adjust. Identities = 28/85 (32%), Positives = 40/85 (47%), Gaps = 5/85 (5%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 RILDLG GTG + +A L S +G G++I+ E A V G+S D ++S Sbjct: 25 ARILDLGCGTGDL-MAFLARSRNTRGQGIEIN----ESAVYECVKKGLSVCHDDIESGLL 79 Query: 159 SSVEGLFDVIVSNPPYIESVIVDCL 183 + FD ++ N E D L Sbjct: 80 EYPDKSFDYVILNQSMQEVRNADAL 104 >gi|194758481|ref|XP_001961490.1| GF14906 [Drosophila ananassae] gi|190615187|gb|EDV30711.1| GF14906 [Drosophila ananassae] Length = 214 Score = 35.4 bits (80), Expect = 8.6, Method: Compositional matrix adjust. Identities = 26/83 (31%), Positives = 40/83 (48%), Gaps = 3/83 (3%) Query: 92 RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151 +I+K+ R+LDLG G G + L E + + GVD S A+E+AK+ A N ++ + Sbjct: 54 KIDKQ--ARVLDLGCGNGMFLVGLANEG-YEQLTGVDYSANAVELAKNIAQDNQMNITYK 110 Query: 152 TLQSDWFSSVEGLFDVIVSNPPY 174 G FDV+ Y Sbjct: 111 VADLTQPQDELGAFDVVHDKGTY 133 >gi|156935630|ref|YP_001439546.1| hypothetical protein ESA_03495 [Cronobacter sakazakii ATCC BAA-894] gi|229564329|sp|A7MIS8|RLMG_ENTS8 RecName: Full=Ribosomal RNA large subunit methyltransferase G; AltName: Full=23S rRNA m2G1835 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase rlmG gi|156533884|gb|ABU78710.1| hypothetical protein ESA_03495 [Cronobacter sakazakii ATCC BAA-894] Length = 376 Score = 35.4 bits (80), Expect = 8.7, Method: Compositional matrix adjust. Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 4/91 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN--GVSERFDTLQSDWF 158 ++DLG G G + L LL ++P K VD S A+ ++ N TN ER + ++ Sbjct: 230 MVDLGCGNGVIGLTLLAQNPQAKVRFVDESYMAVASSRLNVETNLPEAMERCEFQVNNAL 289 Query: 159 SSVEG-LFDVIVSNPPYIES-VIVDCLGLEV 187 + VE F ++ NPP+ + I D + ++ Sbjct: 290 TGVEPESFHAVLCNPPFHQQHAITDHIAWQM 320 >gi|156390966|ref|XP_001635540.1| predicted protein [Nematostella vectensis] gi|156222635|gb|EDO43477.1| predicted protein [Nematostella vectensis] Length = 248 Score = 35.4 bits (80), Expect = 8.7, Method: Compositional matrix adjust. Identities = 30/113 (26%), Positives = 50/113 (44%), Gaps = 10/113 (8%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 ++ L++G G GA+ + + P + DI+ A++ NA +GV +Q+D F Sbjct: 75 LKFLEVGAGMGAIAIEFALQVPQAEVWATDINPAAVDDVAENARLHGVETSVTAIQADVF 134 Query: 159 --SSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFD--PRISLDGGIDGLSHY 206 ++G+ FD+I PP C G +D D R + D L Y Sbjct: 135 DCDDLKGMKFDMIFFRPP-----AGFCEGCNEKDLDMSSRTAWDPNYSILERY 182 >gi|126658081|ref|ZP_01729233.1| Methyltransferase type 12 [Cyanothece sp. CCY0110] gi|126620719|gb|EAZ91436.1| Methyltransferase type 12 [Cyanothece sp. CCY0110] Length = 377 Score = 35.4 bits (80), Expect = 8.7, Method: Compositional matrix adjust. Identities = 29/104 (27%), Positives = 48/104 (46%), Gaps = 10/104 (9%) Query: 86 LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145 L+ P + R RILD+G G +A+ E P + G+DIS L + +V Sbjct: 190 LSERFPNFKPR---RILDMGCSAGGSTIAMAIEFPDAEVHGIDISSSMLRCGHAVSVALD 246 Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSNPPYIE-------SVIVDC 182 + + + + + +G FD+IVSN + E VI++C Sbjct: 247 LPIYYHQMDASHTTFGDGSFDLIVSNIVFHELPNGIRRKVILEC 290 >gi|34496439|ref|NP_900654.1| ribosomal protein L11 methyltransferase [Chromobacterium violaceum ATCC 12472] gi|38605125|sp|P60091|PRMA_CHRVO RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11 Mtase gi|34102292|gb|AAQ58658.1| ribosomal protein L11 methyltransferase [Chromobacterium violaceum ATCC 12472] Length = 298 Score = 35.4 bits (80), Expect = 8.7, Method: Compositional matrix adjust. Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 1/72 (1%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LD G G+G + +A LK VG+DI +A+ ++ NA NGV F ++ + Sbjct: 167 VLDYGCGSGILAIAALKLG-AASAVGIDIDQQAVRASQDNAEQNGVKADFFLPNANPAAQ 225 Query: 161 VEGLFDVIVSNP 172 + + I++NP Sbjct: 226 YDVVLANILANP 237 >gi|46143540|ref|ZP_00135031.2| COG2264: Ribosomal protein L11 methylase [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|126209001|ref|YP_001054226.1| ribosomal protein L11 methyltransferase [Actinobacillus pleuropneumoniae L20] gi|303250992|ref|ZP_07337180.1| ribosomal protein L11 methyltransferase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307253193|ref|ZP_07535069.1| Ribosomal protein L11 methyltransferase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|166223391|sp|A3N2I5|PRMA_ACTP2 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11 Mtase gi|126097793|gb|ABN74621.1| ribosomal protein L11 methyltransferase [Actinobacillus pleuropneumoniae serovar 5b str. L20] gi|302650149|gb|EFL80317.1| ribosomal protein L11 methyltransferase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306859337|gb|EFM91374.1| Ribosomal protein L11 methyltransferase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] Length = 293 Score = 35.4 bits (80), Expect = 8.7, Method: Compositional matrix adjust. Identities = 23/72 (31%), Positives = 41/72 (56%), Gaps = 4/72 (5%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159 ++D G G+G + +A LK + +G+DI +A+ + +NA NGV++R L D Sbjct: 162 VIDFGCGSGILAIAALKLGAK-QAIGIDIDPQAILASGNNAEANGVADRLQLFLAKDQPQ 220 Query: 160 SVEGLFDVIVSN 171 ++ DV+V+N Sbjct: 221 DLQA--DVVVAN 230 >gi|319939643|ref|ZP_08014002.1| RsmD family RNA methyltransferase [Streptococcus anginosus 1_2_62CV] gi|319811232|gb|EFW07538.1| RsmD family RNA methyltransferase [Streptococcus anginosus 1_2_62CV] Length = 179 Score = 35.4 bits (80), Expect = 8.7, Method: Compositional matrix adjust. Identities = 33/131 (25%), Positives = 57/131 (43%), Gaps = 16/131 (12%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 ++LDL G+G++ + + V V+ +A I N ERF+ L+ D Sbjct: 44 QVLDLYAGSGSLAIEAISRG-MVSAVLVEKDRRAQAIISQNISITKEKERFELLKMDSNR 102 Query: 160 SVE---GLFDVIVSNPPYI-ESVIVDCLGLEVRDF-----------DPRISLDGGIDGLS 204 ++E G FD+++ +PPY E + D L R+ D + L I GL Sbjct: 103 ALELVTGQFDLVLLDPPYAKEQIAADIEKLVERELLSDDVLVVCETDKSVDLPEEIAGLG 162 Query: 205 HYRTIADGVSR 215 ++ G+S+ Sbjct: 163 IWKQKIYGISK 173 >gi|259046669|ref|ZP_05737070.1| ribosomal protein L11 methyltransferase [Granulicatella adiacens ATCC 49175] gi|259036834|gb|EEW38089.1| ribosomal protein L11 methyltransferase [Granulicatella adiacens ATCC 49175] Length = 314 Score = 35.4 bits (80), Expect = 8.7, Method: Compositional matrix adjust. Identities = 41/139 (29%), Positives = 62/139 (44%), Gaps = 26/139 (18%) Query: 56 GWRDFY-NVRLTL------SSDTFEPRPETELLV--DSALAF----------SLPRIEK- 95 W+ +Y VR+T S +E + ELL+ D LAF SL +E+ Sbjct: 113 AWKQYYFPVRVTRFLTVVPSWVDYEKEQDDELLIELDPGLAFGTGTHPTTQLSLTALEQT 172 Query: 96 -RDVVRILDLGTGTGAVCLA--LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152 R +LD+GTG+G + +A LL S K DI A +AK N N + Sbjct: 173 IRGNESVLDVGTGSGVLSIASKLLGAS---KVTAFDIDEMATRVAKENIALNPTIGEIEV 229 Query: 153 LQSDWFSSVEGLFDVIVSN 171 +++ V+ D+IV+N Sbjct: 230 FENNLLVGVDQKSDLIVAN 248 >gi|163941858|ref|YP_001646742.1| biotin biosynthesis protein BioC [Bacillus weihenstephanensis KBAB4] gi|163864055|gb|ABY45114.1| biotin biosynthesis protein BioC [Bacillus weihenstephanensis KBAB4] Length = 269 Score = 35.4 bits (80), Expect = 8.7, Method: Compositional matrix adjust. Identities = 26/94 (27%), Positives = 43/94 (45%), Gaps = 3/94 (3%) Query: 81 LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140 + S L+ R + +RIL+LG GTG V L P VD + + + +AK+ Sbjct: 28 MAHSLLSTLKERYSETSSIRILELGCGTGYVTEQLSNLFPKAHITAVDFADEMIAVAKTR 87 Query: 141 AVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174 V R + ++ +E +DVI+SN + Sbjct: 88 KSLGNVMFRCEDIEQ---LKLENPYDVIISNATF 118 >gi|327451839|gb|EGE98493.1| methyltransferase small domain protein [Propionibacterium acnes HL083PA2] Length = 152 Score = 35.4 bits (80), Expect = 8.8, Method: Compositional matrix adjust. Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 1/72 (1%) Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 LDLG G G + AL + P V VD++ A+++ NA V +R + + Sbjct: 71 LDLGCGYGPIACALARACPGSHIVAVDVNDLAIDLTTRNAKALRVGDRVHACRPEEVDP- 129 Query: 162 EGLFDVIVSNPP 173 + FD I SNPP Sbjct: 130 DLRFDEIWSNPP 141 >gi|303253041|ref|ZP_07339193.1| ribosomal protein L11 methyltransferase [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|307248581|ref|ZP_07530596.1| Ribosomal protein L11 methyltransferase [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|302648105|gb|EFL78309.1| ribosomal protein L11 methyltransferase [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|306854931|gb|EFM87119.1| Ribosomal protein L11 methyltransferase [Actinobacillus pleuropneumoniae serovar 2 str. S1536] Length = 293 Score = 35.4 bits (80), Expect = 8.8, Method: Compositional matrix adjust. Identities = 23/72 (31%), Positives = 41/72 (56%), Gaps = 4/72 (5%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159 ++D G G+G + +A LK + +G+DI +A+ + +NA NGV++R L D Sbjct: 162 VIDFGCGSGILAIAALKLGAK-QAIGIDIDPQAILASGNNAEANGVADRLQLFLAKDQPQ 220 Query: 160 SVEGLFDVIVSN 171 ++ DV+V+N Sbjct: 221 DLQA--DVVVAN 230 >gi|238854793|ref|ZP_04645123.1| ribosomal RNA small subunit methyltransferase B [Lactobacillus jensenii 269-3] gi|260664024|ref|ZP_05864877.1| ribosomal RNA small subunit methyltransferase B [Lactobacillus jensenii SJ-7A-US] gi|282933871|ref|ZP_06339219.1| ribosomal RNA small subunit methyltransferase B [Lactobacillus jensenii 208-1] gi|238832583|gb|EEQ24890.1| ribosomal RNA small subunit methyltransferase B [Lactobacillus jensenii 269-3] gi|260561910|gb|EEX27879.1| ribosomal RNA small subunit methyltransferase B [Lactobacillus jensenii SJ-7A-US] gi|281301960|gb|EFA94214.1| ribosomal RNA small subunit methyltransferase B [Lactobacillus jensenii 208-1] Length = 437 Score = 35.4 bits (80), Expect = 8.8, Method: Compositional matrix adjust. Identities = 39/149 (26%), Positives = 58/149 (38%), Gaps = 17/149 (11%) Query: 96 RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155 R+ +LD G L + K +DI K L + K A V +R +TL Sbjct: 247 RENDHVLDTCAAPGGKTTQLAENLSHGKVTSLDIHKKKLNLIKKYAQRMHVDDRVETLAL 306 Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVD--CLGLEVRDFDPRISLDGGIDGLSHYR----TI 209 D + E D ++VD C GL + P I D I + + I Sbjct: 307 DARKAAEHFSDT------KFNKILVDAPCSGLGLLRRKPEIRYDKTIKDVHNLARIQLAI 360 Query: 210 ADGVSRHLNKDG-----LCSVEIGYNQKV 233 D V++ L K+G CS+ I N++V Sbjct: 361 LDNVAQLLKKNGELVYSTCSITIEENEQV 389 >gi|4239958|dbj|BAA74757.1| Orf375 [Thermus thermophilus] Length = 375 Score = 35.4 bits (80), Expect = 8.8, Method: Compositional matrix adjust. Identities = 42/133 (31%), Positives = 63/133 (47%), Gaps = 25/133 (18%) Query: 57 WRDFYNVRLTLSSDTFEPRPE--TELLVDSALAFSLPRIEKR---DVVR---ILDLGTGT 108 WR F + R+ + TF P + VD A L +++R + VR +LDLG G Sbjct: 186 WRAF-SARILGAEYTFHHLPGVFSAGKVDPASLLLLEALQERLGPEGVRGRQVLDLGAGY 244 Query: 109 GAVCLALLKESPFFKGVGVDISC-----KALEIAKSNAVTNGVSERFDTLQSDWFSSV-- 161 GA+ L L + GV D++ K LE +NA+ + L SD ++ Sbjct: 245 GALTLPLARMGAEVVGVEDDLASVLSLQKGLE---ANAL------KAQALHSDVDEALTE 295 Query: 162 EGLFDVIVSNPPY 174 E FD+IV+NPP+ Sbjct: 296 EARFDIIVTNPPF 308 >gi|314922383|gb|EFS86214.1| methyltransferase small domain protein [Propionibacterium acnes HL001PA1] Length = 505 Score = 35.4 bits (80), Expect = 8.9, Method: Compositional matrix adjust. Identities = 37/132 (28%), Positives = 56/132 (42%), Gaps = 26/132 (19%) Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAK-----SNA---VTNGVSERFDTL 153 LD+G G G L L + + V D++ +ALE+A+ S+A + +G +D Sbjct: 170 LDMGCGCGVQSLHLSRHADHV--VATDVNPRALEMAQLTCRLSHADVDIRDG--SLYDPC 225 Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213 D FD+IV+NPPY+ + RD I +GG G + G Sbjct: 226 GHD-------TFDLIVTNPPYV-------MAPPSRDGQRLIYREGGFCGDGLVEAVVRGA 271 Query: 214 SRHLNKDGLCSV 225 LN G+ V Sbjct: 272 PARLNDGGMLQV 283 >gi|225458633|ref|XP_002282801.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 780 Score = 35.4 bits (80), Expect = 8.9, Method: Compositional matrix adjust. Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 3/75 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 I+D TG G + + S + +DI K +E A+ NA GV +R D ++ D F Sbjct: 615 IVDCFTGVGGNAIQFAQRSKHV--IAIDIDPKKIEYAQHNAAIYGVDDRIDFIKGDSFLL 672 Query: 161 VEGL-FDVIVSNPPY 174 L D + +PP+ Sbjct: 673 ASTLKADTVFLSPPW 687 >gi|154148405|ref|YP_001406871.1| methyltransferase small [Campylobacter hominis ATCC BAA-381] gi|153804414|gb|ABS51421.1| methyltransferase small [Campylobacter hominis ATCC BAA-381] Length = 235 Score = 35.4 bits (80), Expect = 8.9, Method: Compositional matrix adjust. Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 1/75 (1%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 +ILD+G G G + L L ++ FK ++I + +I + N N + + F Sbjct: 35 KILDVGAGCGILGLLLARDFKNFKISLLEIQSENFQILRKNVTENELDCEILINDFNEFL 94 Query: 160 SVEGLFDVIVSNPPY 174 + + FD IVSNPP+ Sbjct: 95 TSQK-FDFIVSNPPF 108 >gi|239625789|ref|ZP_04668820.1| RNA methyltransferase [Clostridiales bacterium 1_7_47_FAA] gi|239520019|gb|EEQ59885.1| RNA methyltransferase [Clostridiales bacterium 1_7_47FAA] Length = 462 Score = 35.4 bits (80), Expect = 9.0, Method: Compositional matrix adjust. Identities = 35/100 (35%), Positives = 53/100 (53%), Gaps = 12/100 (12%) Query: 78 TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEI 136 E+L D+A F E +D V + DL +GTG + L +P K V GV+I +A+E Sbjct: 302 AEVLYDTARGFVG---ETKDKV-VFDLYSGTGTIAQIL---APVAKKVVGVEIVEEAVEA 354 Query: 137 AKSNAVTNGVSERFDTLQSDWFSSVEGLF---DVIVSNPP 173 AK NA NG+ + + + D ++ L D+IV +PP Sbjct: 355 AKVNAGLNGL-DNCEFVAGDVLKVIDDLEDKPDLIVVDPP 393 >gi|172035610|ref|YP_001802111.1| hypothetical protein cce_0694 [Cyanothece sp. ATCC 51142] gi|171697064|gb|ACB50045.1| unknown [Cyanothece sp. ATCC 51142] Length = 359 Score = 35.4 bits (80), Expect = 9.0, Method: Compositional matrix adjust. Identities = 25/92 (27%), Positives = 48/92 (52%), Gaps = 2/92 (2%) Query: 81 LVDSALAFSLPRIEKR--DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAK 138 ++D A+ +P + + D +++LD+G G+G L + P + +GVD S A+ +A+ Sbjct: 156 VLDEAILPLVPGLTAKLSDGIKVLDVGCGSGRAISKLAQLYPRSQFIGVDFSETAIALAR 215 Query: 139 SNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170 S A G++ +Q + E FD+I + Sbjct: 216 SQAQGLGLNNLKFEVQDAANLNFEQPFDLITA 247 >gi|156355071|ref|XP_001623498.1| predicted protein [Nematostella vectensis] gi|156210206|gb|EDO31398.1| predicted protein [Nematostella vectensis] Length = 252 Score = 35.4 bits (80), Expect = 9.0, Method: Compositional matrix adjust. Identities = 25/96 (26%), Positives = 44/96 (45%), Gaps = 3/96 (3%) Query: 81 LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140 LV A + + ++ L++G G GA+ + + P + DI+ A+E N Sbjct: 57 LVSMARGLLKQKSDTESFLKFLEVGAGMGAIAIEFALQVPQAEVWATDINPAAVEDVAEN 116 Query: 141 AVTNGVSERFDTLQSDWF--SSVEGL-FDVIVSNPP 173 A +GV +Q+D F ++G+ FD+I P Sbjct: 117 ACLHGVENSVTAIQADVFDCDGLKGMKFDMIFFRQP 152 >gi|86143678|ref|ZP_01062054.1| hypothetical protein MED217_00255 [Leeuwenhoekiella blandensis MED217] gi|85829721|gb|EAQ48183.1| hypothetical protein MED217_00255 [Leeuwenhoekiella blandensis MED217] Length = 561 Score = 35.4 bits (80), Expect = 9.0, Method: Compositional matrix adjust. Identities = 30/109 (27%), Positives = 48/109 (44%), Gaps = 14/109 (12%) Query: 68 SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 + + P E EL+ D+A +L + KR ++ LG G + +A G+ Sbjct: 318 TKEAIPPPTEEELMRDAAYREALAKRRKRKLILTSVLGV-FGILVIA----------TGI 366 Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE 176 I+ K + K N + + D L+SDW S G VI+S P +E Sbjct: 367 LIATKGFDFVKDNFIGHPSK---DLLESDWVRSEYGYPPVIISTPRILE 412 >gi|313815328|gb|EFS53042.1| methyltransferase small domain protein [Propionibacterium acnes HL059PA1] gi|315099509|gb|EFT71485.1| methyltransferase small domain protein [Propionibacterium acnes HL059PA2] Length = 505 Score = 35.4 bits (80), Expect = 9.0, Method: Compositional matrix adjust. Identities = 37/132 (28%), Positives = 56/132 (42%), Gaps = 26/132 (19%) Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAK-----SNA---VTNGVSERFDTL 153 LD+G G G L L + + V D++ +ALE+A+ S+A + +G +D Sbjct: 170 LDMGCGCGVQSLHLSRHADHV--VATDVNPRALEMAQLTCRLSHADVDIRDG--SLYDPC 225 Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213 D FD+IV+NPPY+ + RD I +GG G + G Sbjct: 226 GHD-------TFDLIVTNPPYV-------MAPPSRDGQRLIYREGGFCGDGLVEAVVRGA 271 Query: 214 SRHLNKDGLCSV 225 LN G+ V Sbjct: 272 PARLNDGGMLQV 283 >gi|297798406|ref|XP_002867087.1| O-methyltransferase family 2 protein [Arabidopsis lyrata subsp. lyrata] gi|297312923|gb|EFH43346.1| O-methyltransferase family 2 protein [Arabidopsis lyrata subsp. lyrata] Length = 368 Score = 35.4 bits (80), Expect = 9.0, Method: Compositional matrix adjust. Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 8/72 (11%) Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 VV ++D+G GTG L+KE P+ KG D+ +E+A+ V +GV + ++ D Sbjct: 197 VVTVIDVGGGTGETMGILVKEFPWIKGFNFDLP-HVIEVAQ---VLDGV----ENVEGDM 248 Query: 158 FSSVEGLFDVIV 169 F S+ VI+ Sbjct: 249 FDSIPACDAVII 260 >gi|322418261|ref|YP_004197484.1| type 11 methyltransferase [Geobacter sp. M18] gi|320124648|gb|ADW12208.1| Methyltransferase type 11 [Geobacter sp. M18] Length = 273 Score = 35.4 bits (80), Expect = 9.0, Method: Compositional matrix adjust. Identities = 25/76 (32%), Positives = 34/76 (44%), Gaps = 2/76 (2%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 V++LD+G GTG + L P VGVD++ E A N V R ++ Sbjct: 47 VQLLDIGAGTGRLLARLADLYPDVDAVGVDLAPGMCETAARNLAGRRV--RVMNADAESL 104 Query: 159 SSVEGLFDVIVSNPPY 174 G FDV+VS Y Sbjct: 105 PFEAGSFDVVVSTSTY 120 >gi|167752279|ref|ZP_02424406.1| hypothetical protein ALIPUT_00523 [Alistipes putredinis DSM 17216] gi|167660520|gb|EDS04650.1| hypothetical protein ALIPUT_00523 [Alistipes putredinis DSM 17216] Length = 469 Score = 35.4 bits (80), Expect = 9.0, Method: Compositional matrix adjust. Identities = 35/117 (29%), Positives = 53/117 (45%), Gaps = 21/117 (17%) Query: 72 FEPRPETELLVDSALAFSLPRIEKRDVVRI------LDLGTGTGAV---CLALLKESPFF 122 F+ P++ +SA A+ L ++ RD + DL TGTG + C A Sbjct: 292 FKVGPKSFYQTNSAQAYELYKV-ARDFAALTGKEILYDLYTGTGTIANFCAARCA----- 345 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSER------FDTLQSDWFSSVEGLFDVIVSNPP 173 K VGV+ +A+E A+ N+ NG+ + SD F G DVI+ +PP Sbjct: 346 KVVGVEYVPEAIEDARINSTLNGIGNTVFYAGDMKAVLSDEFIRRNGRPDVIILDPP 402 >gi|330984157|gb|EGH82260.1| hypothetical protein PLA107_03915 [Pseudomonas syringae pv. lachrymans str. M301315] Length = 182 Score = 35.4 bits (80), Expect = 9.1, Method: Compositional matrix adjust. Identities = 22/87 (25%), Positives = 44/87 (50%), Gaps = 5/87 (5%) Query: 152 TLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG---LEVRDFDPRISLDGGIDGLSHYRT 208 T+ + W ++ FD + + P I V + +G ++ FD + S+ G++ S + Sbjct: 18 TIVAVWMATKSQSFDDVFTGPVVINGVPTENIGTVSIKTERFDDKPSITFGVEAPSREKA 77 Query: 209 IADGVSR-HLNKDGLCSVEIGYNQKVD 234 +A G++ ++ + CSV GY+ K D Sbjct: 78 LAQGINEYYMGSNTSCSV-TGYHDKRD 103 >gi|313840376|gb|EFS78090.1| methyltransferase small domain protein [Propionibacterium acnes HL086PA1] Length = 505 Score = 35.4 bits (80), Expect = 9.1, Method: Compositional matrix adjust. Identities = 37/132 (28%), Positives = 56/132 (42%), Gaps = 26/132 (19%) Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAK-----SNA---VTNGVSERFDTL 153 LD+G G G L L + + V D++ +ALE+A+ S+A + +G +D Sbjct: 170 LDMGCGCGVQSLHLSRHADHV--VATDVNPRALEMAQLTCRLSHADVDIRDG--SLYDPC 225 Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213 D FD+IV+NPPY+ + RD I +GG G + G Sbjct: 226 GHD-------TFDLIVTNPPYV-------MAPPSRDGQRLIYREGGFCGDGLVEAVVRGA 271 Query: 214 SRHLNKDGLCSV 225 LN G+ V Sbjct: 272 PARLNDGGMLQV 283 >gi|229827912|ref|ZP_04453981.1| hypothetical protein GCWU000182_03304 [Abiotrophia defectiva ATCC 49176] gi|229787847|gb|EEP23961.1| hypothetical protein GCWU000182_03304 [Abiotrophia defectiva ATCC 49176] Length = 327 Score = 35.4 bits (80), Expect = 9.1, Method: Compositional matrix adjust. Identities = 26/99 (26%), Positives = 45/99 (45%), Gaps = 11/99 (11%) Query: 145 GVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC-----LGLEVRDFDPRISLDGG 199 G+++ FD ++ W S+ + D + N YIE+ I LG E + D ++S DG Sbjct: 45 GLAQTFDESKAGWDSNTAAMIDKPIHN--YIENTISSMQAAFDLGAEAVELDIKLSKDGQ 102 Query: 200 I----DGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234 + D YR +G + + L +++GY D Sbjct: 103 LAVFHDSTLLYRCGVEGEIQDYTMEELKKMDVGYGYTAD 141 >gi|146308558|ref|YP_001189023.1| ribosomal protein L11 methylase-like protein [Pseudomonas mendocina ymp] gi|145576759|gb|ABP86291.1| Ribosomal protein L11 methylase-like protein [Pseudomonas mendocina ymp] Length = 265 Score = 35.4 bits (80), Expect = 9.1, Method: Compositional matrix adjust. Identities = 16/58 (27%), Positives = 32/58 (55%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 ++DLG+G G + ++ +++ G+D+ + + A+ NA GV++R Q D F Sbjct: 61 VIDLGSGDGRIAISAVQDHGARAAYGIDLDPERVSEARENAEREGVADRVTFEQGDLF 118 >gi|108763807|ref|YP_635096.1| hypothetical protein MXAN_6982 [Myxococcus xanthus DK 1622] gi|108467687|gb|ABF92872.1| conserved hypothetical protein [Myxococcus xanthus DK 1622] Length = 287 Score = 35.4 bits (80), Expect = 9.1, Method: Compositional matrix adjust. Identities = 27/97 (27%), Positives = 49/97 (50%), Gaps = 9/97 (9%) Query: 75 RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE-SPFFKGVGVDISCKA 133 +P +LLV++ ++ R ++LD+G GTG+ LA+ + VG+DIS Sbjct: 35 KPFEDLLVEA--------VQARGARQVLDVGCGTGSTTLAVARRLGAQGHCVGIDISAPM 86 Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170 L A++ A V+ F ++ + G FD+++S Sbjct: 87 LAAARARAEAEHVAASFIEANAEHHAFERGRFDMVIS 123 >gi|127511265|ref|YP_001092462.1| ribosomal protein L11 methyltransferase [Shewanella loihica PV-4] gi|166223439|sp|A3Q9Q5|PRMA_SHELP RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11 Mtase gi|126636560|gb|ABO22203.1| LSU ribosomal protein L11P methyltransferase [Shewanella loihica PV-4] Length = 293 Score = 35.4 bits (80), Expect = 9.1, Method: Compositional matrix adjust. Identities = 18/50 (36%), Positives = 31/50 (62%), Gaps = 1/50 (2%) Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151 +D G G+G + +A LK K G+DI +A++ +K+NA N V+++ D Sbjct: 163 IDFGCGSGILAVAALKLG-AAKVTGIDIDYQAIDASKANAERNQVADKLD 211 >gi|104774443|ref|YP_619423.1| putative methyltransferase [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|116514542|ref|YP_813448.1| 16S RNA G1207 methylase RsmC [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|103423524|emb|CAI98426.1| Putative methyltransferase [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|116093857|gb|ABJ59010.1| 16S rRNA m(2)G 1207 methyltransferase [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|325126253|gb|ADY85583.1| Hypothetical conserved protein [Lactobacillus delbrueckii subsp. bulgaricus 2038] Length = 200 Score = 35.4 bits (80), Expect = 9.1, Method: Compositional matrix adjust. Identities = 38/143 (26%), Positives = 67/143 (46%), Gaps = 14/143 (9%) Query: 34 QRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRP---ETELLVDSALAFSL 90 +++F N V +H + + G N+ LT + F + +L++ L L Sbjct: 3 EQYFTENPTVDHDEHHVNYHLNG----INLNLTTDAGVFSKTRVDYGSGVLIEQMLDQEL 58 Query: 91 PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150 P ILD+G G G + L K+ P + VD++ +A+++A+ NA N + Sbjct: 59 PG------GNILDVGCGYGPIGLFAAKKWPGRQVDMVDVNERAMDLARRNAAAN-GAGNV 111 Query: 151 DTLQSDWFSSVEGLFDVIVSNPP 173 + SD + V G + +IV+NPP Sbjct: 112 NIFASDRYQEVFGQYAMIVTNPP 134 >gi|307262021|ref|ZP_07543676.1| Ribosomal protein L11 methyltransferase [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|306868304|gb|EFN00126.1| Ribosomal protein L11 methyltransferase [Actinobacillus pleuropneumoniae serovar 12 str. 1096] Length = 293 Score = 35.4 bits (80), Expect = 9.2, Method: Compositional matrix adjust. Identities = 23/72 (31%), Positives = 41/72 (56%), Gaps = 4/72 (5%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159 ++D G G+G + +A LK + +G+DI +A+ + +NA NGV++R L D Sbjct: 162 VIDFGCGSGILAIAALKLGAK-QAIGIDIDPQAILASGNNAEANGVADRLQLFLAKDQPQ 220 Query: 160 SVEGLFDVIVSN 171 ++ DV+V+N Sbjct: 221 DLQA--DVVVAN 230 >gi|289428864|ref|ZP_06430544.1| methyltransferase, HemK family [Propionibacterium acnes J165] gi|289157865|gb|EFD06088.1| methyltransferase, HemK family [Propionibacterium acnes J165] gi|313806372|gb|EFS44879.1| methyltransferase, HemK family [Propionibacterium acnes HL087PA2] gi|313822013|gb|EFS59727.1| methyltransferase, HemK family [Propionibacterium acnes HL036PA1] gi|313824091|gb|EFS61805.1| methyltransferase, HemK family [Propionibacterium acnes HL036PA2] gi|313826458|gb|EFS64172.1| methyltransferase, HemK family [Propionibacterium acnes HL063PA1] gi|314926590|gb|EFS90421.1| methyltransferase, HemK family [Propionibacterium acnes HL036PA3] gi|314961345|gb|EFT05446.1| methyltransferase, HemK family [Propionibacterium acnes HL002PA2] gi|314980311|gb|EFT24405.1| methyltransferase, HemK family [Propionibacterium acnes HL072PA2] gi|314987396|gb|EFT31487.1| methyltransferase, HemK family [Propionibacterium acnes HL005PA2] gi|314989063|gb|EFT33154.1| methyltransferase, HemK family [Propionibacterium acnes HL005PA3] gi|315082698|gb|EFT54674.1| methyltransferase, HemK family [Propionibacterium acnes HL027PA2] gi|315086057|gb|EFT58033.1| methyltransferase, HemK family [Propionibacterium acnes HL002PA3] gi|315087642|gb|EFT59618.1| methyltransferase, HemK family [Propionibacterium acnes HL072PA1] gi|327333296|gb|EGE75016.1| putative transferase [Propionibacterium acnes HL096PA3] gi|327445227|gb|EGE91881.1| methyltransferase, HemK family [Propionibacterium acnes HL013PA2] gi|332674647|gb|AEE71463.1| putative transferase [Propionibacterium acnes 266] Length = 505 Score = 35.4 bits (80), Expect = 9.2, Method: Compositional matrix adjust. Identities = 37/132 (28%), Positives = 56/132 (42%), Gaps = 26/132 (19%) Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAK-----SNA---VTNGVSERFDTL 153 LD+G G G L L + + V D++ +ALE+A+ S+A + +G +D Sbjct: 170 LDMGCGCGVQSLHLSRHADHV--VATDVNPRALEMAQLTCRLSHADVDIRDG--SLYDPC 225 Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213 D FD+IV+NPPY+ + RD I +GG G + G Sbjct: 226 GHD-------TFDLIVTNPPYV-------MAPPSRDGQRLIYREGGFCGDGLVEAVVRGA 271 Query: 214 SRHLNKDGLCSV 225 LN G+ V Sbjct: 272 PARLNDGGMLQV 283 >gi|260913627|ref|ZP_05920103.1| methyltransferase [Pasteurella dagmatis ATCC 43325] gi|260632166|gb|EEX50341.1| methyltransferase [Pasteurella dagmatis ATCC 43325] Length = 495 Score = 35.4 bits (80), Expect = 9.2, Method: Compositional matrix adjust. Identities = 27/100 (27%), Positives = 47/100 (47%), Gaps = 10/100 (10%) Query: 49 ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108 E+I RI ++ YN +S PE + + S L F P I+ ++L++G G Sbjct: 2 ENIERI---KESYNELPYISKSFVHTLPERQKAILSLLGFQTPEIKG---AKVLEIGCGF 55 Query: 109 GAVCLALLKESPFFKGVGVDISCKAL----EIAKSNAVTN 144 G ++ +P + G+D+S K + E+ K +TN Sbjct: 56 GGNIISYALANPDTQFTGIDLSEKQIEGGREVVKQLGLTN 95 >gi|260596121|ref|YP_003208692.1| ribosomal protein L11 methyltransferase [Cronobacter turicensis z3032] gi|260215298|emb|CBA27241.1| Ribosomal protein L11 methyltransferase [Cronobacter turicensis z3032] Length = 293 Score = 35.4 bits (80), Expect = 9.2, Method: Compositional matrix adjust. Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 15/107 (14%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 ++D G G+G + +A LK K +GVDI +A++ ++ NA NGVSER + + Sbjct: 162 VIDFGCGSGILAIAALKLG-AAKAIGVDIDPQAIQASRDNAERNGVSERLELYLPE-NQP 219 Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS---LDGGIDGLS 204 + DV+V+N L +R+ P IS + GG GLS Sbjct: 220 ADMQADVVVAN----------ILAGPLRELAPLISVLPVQGGRLGLS 256 >gi|228954206|ref|ZP_04116234.1| Methyltransferase [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|229071429|ref|ZP_04204651.1| Methyltransferase [Bacillus cereus F65185] gi|229081182|ref|ZP_04213692.1| Methyltransferase [Bacillus cereus Rock4-2] gi|228702226|gb|EEL54702.1| Methyltransferase [Bacillus cereus Rock4-2] gi|228711720|gb|EEL63673.1| Methyltransferase [Bacillus cereus F65185] gi|228805526|gb|EEM52117.1| Methyltransferase [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 188 Score = 35.4 bits (80), Expect = 9.2, Method: Compositional matrix adjust. Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 7/88 (7%) Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 LDL G+G + + L K + VD KA+++ N + V E+ + ++D +V Sbjct: 46 LDLFGGSGGLGIEALSRG-IDKAIFVDRDSKAIKVIHQNLESCRVQEQAEVYRNDAERAV 104 Query: 162 EGL------FDVIVSNPPYIESVIVDCL 183 + L FD+I+ +PPY E IV + Sbjct: 105 KALIKREMSFDLILIDPPYKEQKIVSLI 132 >gi|209965323|ref|YP_002298238.1| ribosomal protein L11 methyltransferase [Rhodospirillum centenum SW] gi|209958789|gb|ACI99425.1| ribosomal protein L11 methyltransferase [Rhodospirillum centenum SW] Length = 289 Score = 35.4 bits (80), Expect = 9.2, Method: Compositional matrix adjust. Identities = 27/76 (35%), Positives = 39/76 (51%), Gaps = 9/76 (11%) Query: 102 LDLGTGTGAVCLAL--LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 LD+G G+G + A+ L P GVDI ++EIA NAV N V+ D + + Sbjct: 154 LDMGCGSGILGFAIARLWRMPVL---GVDIDDLSVEIAAENAVLNRVAHLVDLRAGNGYD 210 Query: 160 SVE----GLFDVIVSN 171 + E FD+IV+N Sbjct: 211 TPEVRRRAPFDLIVAN 226 >gi|227827841|ref|YP_002829621.1| ribosomal protein L11 methyltransferase [Sulfolobus islandicus M.14.25] gi|227830551|ref|YP_002832331.1| ribosomal protein L11 methyltransferase, [Sulfolobus islandicus L.S.2.15] gi|229579364|ref|YP_002837762.1| ribosomal protein L11 methyltransferase, [Sulfolobus islandicus Y.G.57.14] gi|229581876|ref|YP_002840275.1| ribosomal protein L11 methyltransferase, putative [Sulfolobus islandicus Y.N.15.51] gi|229585111|ref|YP_002843613.1| ribosomal protein L11 methyltransferase [Sulfolobus islandicus M.16.27] gi|238620014|ref|YP_002914840.1| ribosomal protein L11 methyltransferase, putative [Sulfolobus islandicus M.16.4] gi|284998046|ref|YP_003419813.1| Ribosomal protein L11 methyltransferase, putative [Sulfolobus islandicus L.D.8.5] gi|227456999|gb|ACP35686.1| ribosomal protein L11 methyltransferase, putative [Sulfolobus islandicus L.S.2.15] gi|227459637|gb|ACP38323.1| ribosomal protein L11 methyltransferase, putative [Sulfolobus islandicus M.14.25] gi|228010078|gb|ACP45840.1| ribosomal protein L11 methyltransferase, putative [Sulfolobus islandicus Y.G.57.14] gi|228012592|gb|ACP48353.1| ribosomal protein L11 methyltransferase, putative [Sulfolobus islandicus Y.N.15.51] gi|228020161|gb|ACP55568.1| ribosomal protein L11 methyltransferase, putative [Sulfolobus islandicus M.16.27] gi|238381084|gb|ACR42172.1| ribosomal protein L11 methyltransferase, putative [Sulfolobus islandicus M.16.4] gi|284445941|gb|ADB87443.1| Ribosomal protein L11 methyltransferase, putative [Sulfolobus islandicus L.D.8.5] gi|323474909|gb|ADX85515.1| methyltransferase, unknown function [Sulfolobus islandicus REY15A] gi|323477650|gb|ADX82888.1| ribosomal protein L11 methyltransferase, putative [Sulfolobus islandicus HVE10/4] Length = 161 Score = 35.4 bits (80), Expect = 9.2, Method: Compositional matrix adjust. Identities = 24/84 (28%), Positives = 43/84 (51%), Gaps = 4/84 (4%) Query: 76 PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135 P E +V L + ++ + D+V DLG G G + + K+ K VGV+I+ + + Sbjct: 11 PTPEKVVRRMLEIA--KVSQDDIV--YDLGCGDGRIIITAAKDFNVKKAVGVEINDERIR 66 Query: 136 IAKSNAVTNGVSERFDTLQSDWFS 159 A +N NGV+ R ++ ++F Sbjct: 67 EALANIEKNGVTGRASIVKGNFFE 90 >gi|78221363|ref|YP_383110.1| ribosomal L11 methyltransferase [Geobacter metallireducens GS-15] gi|78192618|gb|ABB30385.1| [LSU ribosomal protein L11P]-lysine N-methyltransferase [Geobacter metallireducens GS-15] Length = 214 Score = 35.4 bits (80), Expect = 9.2, Method: Compositional matrix adjust. Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 1/82 (1%) Query: 90 LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 + RI +R LDLG+GTG + +A ++ V VDI KA E +N NG+ R Sbjct: 54 MERIPGIAGMRCLDLGSGTGILAVAAIRLGAASV-VAVDIDPKAAESCAANVRLNGMEGR 112 Query: 150 FDTLQSDWFSSVEGLFDVIVSN 171 ++ + S +D++++N Sbjct: 113 IFSVCGELASVGREPYDLLLAN 134 >gi|332709554|ref|ZP_08429515.1| methylase involved in ubiquinone/menaquinone biosynthesis [Lyngbya majuscula 3L] gi|332351813|gb|EGJ31392.1| methylase involved in ubiquinone/menaquinone biosynthesis [Lyngbya majuscula 3L] Length = 336 Score = 35.4 bits (80), Expect = 9.3, Method: Compositional matrix adjust. Identities = 18/60 (30%), Positives = 34/60 (56%), Gaps = 1/60 (1%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 ++D+G G+G+ +A L+ SP K + D+ K + ++ A + VSER + D+F + Sbjct: 173 LVDVGGGSGSFAIAALESSPNLKAIVFDLP-KVRQYLENKATQHRVSERIQFISGDFFKN 231 >gi|317055290|ref|YP_004103757.1| methyltransferase small [Ruminococcus albus 7] gi|315447559|gb|ADU21123.1| methyltransferase small [Ruminococcus albus 7] Length = 409 Score = 35.4 bits (80), Expect = 9.3, Method: Compositional matrix adjust. Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 15/83 (18%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVG----VDISCKALEIAKSNAVTNGVSERFDTLQSD 156 +LD T TG+ L + F G VD+S A++ AK+NA NG+S++ D + D Sbjct: 238 VLDCFTHTGSFAL-----NAAFGGAAHVTAVDVSQFAVDTAKANAERNGLSDKMDFVCGD 292 Query: 157 WFSSVEGL------FDVIVSNPP 173 F + L +D I+ +PP Sbjct: 293 VFDLLPKLTEEKAGYDFIILDPP 315 >gi|282865355|ref|ZP_06274407.1| N-6 DNA methylase [Streptomyces sp. ACTE] gi|282559828|gb|EFB65378.1| N-6 DNA methylase [Streptomyces sp. ACTE] Length = 581 Score = 35.4 bits (80), Expect = 9.3, Method: Compositional matrix adjust. Identities = 41/128 (32%), Positives = 58/128 (45%), Gaps = 13/128 (10%) Query: 58 RDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRIL-DLGTGTGAV-CLA- 114 R F S D + PR LLVD A + + ++R L D GTG + LA Sbjct: 158 RKFNEAANETSGDHYTPRDAIRLLVDLLFAEKDVDLTEGGIIRSLYDPTAGTGGMLSLAE 217 Query: 115 --LLKESPFFK-GV-GVDISCKALEIAKSNAVTNGVSER----FDTLQSDWFSSVEGLFD 166 LL E+P K G+ G + + ++ I KS+ + G +TL D F + FD Sbjct: 218 EHLLAENPGAKLGLYGQEYNPQSYAICKSDLLAKGHDATNIAFGNTLTDDAFKGRQ--FD 275 Query: 167 VIVSNPPY 174 +SNPPY Sbjct: 276 YCMSNPPY 283 >gi|225461518|ref|XP_002282613.1| PREDICTED: hypothetical protein [Vitis vinifera] gi|302142971|emb|CBI20266.3| unnamed protein product [Vitis vinifera] Length = 367 Score = 35.4 bits (80), Expect = 9.3, Method: Compositional matrix adjust. Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 1/48 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147 R LD GTG+G + +A LK VG+D+ +A+ A NA N +S Sbjct: 210 RFLDYGTGSGILAIAALKFG-AASSVGIDVDPQAITAATQNAALNKIS 256 >gi|125975563|ref|YP_001039473.1| putative RNA methylase [Clostridium thermocellum ATCC 27405] gi|256005933|ref|ZP_05430877.1| putative RNA methylase [Clostridium thermocellum DSM 2360] gi|281416574|ref|ZP_06247594.1| putative RNA methylase [Clostridium thermocellum JW20] gi|125715788|gb|ABN54280.1| putative RNA methylase [Clostridium thermocellum ATCC 27405] gi|255990104|gb|EEU00242.1| putative RNA methylase [Clostridium thermocellum DSM 2360] gi|281407976|gb|EFB38234.1| putative RNA methylase [Clostridium thermocellum JW20] gi|316939680|gb|ADU73714.1| rRNA (guanine-N(2)-)-methyltransferase [Clostridium thermocellum DSM 1313] Length = 378 Score = 35.4 bits (80), Expect = 9.3, Method: Compositional matrix adjust. Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 1/77 (1%) Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS-SV 161 D+ A+ L + K G DI+ A+E+AK NA GV + + SD+ + ++ Sbjct: 234 DIWKQERALALRAIDHDIKLKIYGSDINPDAIELAKENACLAGVDDCIEFFVSDFRNVNI 293 Query: 162 EGLFDVIVSNPPYIESV 178 + + VI+ NPPY E + Sbjct: 294 KEDYGVIICNPPYGERI 310 >gi|326802550|ref|YP_004320369.1| ubiquinone/menaquinone biosynthesis methyltransferase ubiE [Sphingobacterium sp. 21] gi|326553314|gb|ADZ81699.1| Ubiquinone/menaquinone biosynthesis methyltransferase ubiE [Sphingobacterium sp. 21] Length = 244 Score = 35.0 bits (79), Expect = 9.3, Method: Compositional matrix adjust. Identities = 21/57 (36%), Positives = 28/57 (49%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156 +ILD+ TGTG + K VGVDIS L +AK GV +F+ + D Sbjct: 61 KILDVATGTGDFAFEAINILKPDKIVGVDISEGMLAVAKEKIAKRGVGNKFEVVLGD 117 >gi|307246456|ref|ZP_07528529.1| Ribosomal protein L11 methyltransferase [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307255439|ref|ZP_07537246.1| Ribosomal protein L11 methyltransferase [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307259891|ref|ZP_07541605.1| Ribosomal protein L11 methyltransferase [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306852660|gb|EFM84892.1| Ribosomal protein L11 methyltransferase [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306861623|gb|EFM93610.1| Ribosomal protein L11 methyltransferase [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306866061|gb|EFM97935.1| Ribosomal protein L11 methyltransferase [Actinobacillus pleuropneumoniae serovar 11 str. 56153] Length = 293 Score = 35.0 bits (79), Expect = 9.3, Method: Compositional matrix adjust. Identities = 23/72 (31%), Positives = 41/72 (56%), Gaps = 4/72 (5%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159 ++D G G+G + +A LK + +G+DI +A+ + +NA NGV++R L D Sbjct: 162 VIDFGCGSGILAIAALKLGAK-QAIGIDIDPQAILASGNNAEANGVADRLQLFLAKDQPQ 220 Query: 160 SVEGLFDVIVSN 171 ++ DV+V+N Sbjct: 221 DLQA--DVVVAN 230 >gi|167645559|ref|YP_001683222.1| ribosomal L11 methyltransferase [Caulobacter sp. K31] gi|254782837|sp|B0T1G7|PRMA_CAUSK RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11 Mtase gi|167347989|gb|ABZ70724.1| ribosomal L11 methyltransferase [Caulobacter sp. K31] Length = 288 Score = 35.0 bits (79), Expect = 9.3, Method: Compositional matrix adjust. Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 1/58 (1%) Query: 93 IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150 I+ R ++LD+G GTG + +A + VG DI ++ I+K NA N + +F Sbjct: 145 IKARKFKKVLDVGAGTGLLAIAAARTGSRI-AVGTDIDRPSVRISKENAKVNRANAKF 201 >gi|16330344|ref|NP_441072.1| hypothetical protein sll1693 [Synechocystis sp. PCC 6803] gi|1652833|dbj|BAA17752.1| sll1693 [Synechocystis sp. PCC 6803] Length = 440 Score = 35.0 bits (79), Expect = 9.3, Method: Compositional matrix adjust. Identities = 16/39 (41%), Positives = 26/39 (66%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKS 139 +LD+ GTGA L + +P K VG+DIS ++++IA+ Sbjct: 62 MLDVACGTGATTLTMALANPGAKVVGIDISPESIKIAEE 100 >gi|327334815|gb|EGE76526.1| putative transferase [Propionibacterium acnes HL097PA1] Length = 505 Score = 35.0 bits (79), Expect = 9.4, Method: Compositional matrix adjust. Identities = 37/132 (28%), Positives = 56/132 (42%), Gaps = 26/132 (19%) Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAK-----SNA---VTNGVSERFDTL 153 LD+G G G L L + + V D++ +ALE+A+ S+A + +G +D Sbjct: 170 LDMGCGCGVQSLHLSRHADHV--VATDVNPRALEMAQLTCRLSHADVDIRDG--SLYDPC 225 Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213 D FD+IV+NPPY+ + RD I +GG G + G Sbjct: 226 GHD-------TFDLIVTNPPYV-------MAPPSRDGQRLIYREGGFCGDGLVEAVVRGA 271 Query: 214 SRHLNKDGLCSV 225 LN G+ V Sbjct: 272 PARLNDGGMLQV 283 >gi|330790811|ref|XP_003283489.1| hypothetical protein DICPUDRAFT_25940 [Dictyostelium purpureum] gi|325086599|gb|EGC39986.1| hypothetical protein DICPUDRAFT_25940 [Dictyostelium purpureum] Length = 447 Score = 35.0 bits (79), Expect = 9.4, Method: Compositional matrix adjust. Identities = 27/99 (27%), Positives = 48/99 (48%), Gaps = 19/99 (19%) Query: 93 IEKRDVVRILDLGTGTGAVCLALLKESPFFKG---VGVDISCKALEIAKSNAVTNGVSER 149 I+ +VV+ +D+GTG A C+ L FK +G+DI +L+ AK N N + + Sbjct: 92 IDVNNVVKGIDIGTG--ASCIFPLLGVKLFKNWSFLGLDIDDSSLKFAKKNIELNSLESK 149 Query: 150 FDTLQSD--------WFSSVEG------LFDVIVSNPPY 174 +++ +F + +G +FD + NPP+ Sbjct: 150 ISLFKNENKEKILFNYFQANQGEEKNEEVFDFCLCNPPF 188 >gi|320527311|ref|ZP_08028496.1| hypothetical protein HMPREF9430_00602 [Solobacterium moorei F0204] gi|320132335|gb|EFW24880.1| hypothetical protein HMPREF9430_00602 [Solobacterium moorei F0204] Length = 219 Score = 35.0 bits (79), Expect = 9.4, Method: Compositional matrix adjust. Identities = 22/71 (30%), Positives = 33/71 (46%) Query: 99 VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 V + D+GT + + +K K DI+ LEIAK N + + +T+ SD F Sbjct: 16 VVLADIGTDHAFLPILAIKNKKVQKAYACDIAKGPLEIAKRNIQAENLDGQIETILSDGF 75 Query: 159 SSVEGLFDVIV 169 V DV+V Sbjct: 76 EHVPTDVDVVV 86 >gi|317473462|ref|ZP_07932756.1| methyltransferase domain-containing protein [Anaerostipes sp. 3_2_56FAA] gi|316899112|gb|EFV21132.1| methyltransferase domain-containing protein [Anaerostipes sp. 3_2_56FAA] Length = 264 Score = 35.0 bits (79), Expect = 9.4, Method: Compositional matrix adjust. Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 2/70 (2%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LD+GTGTG + L F G+DIS + +E AK A + RF ++ Sbjct: 49 VLDIGTGTGVIPRNLYSHGARF--TGIDISGQQIEQAKKLAAAGHMDIRFLCTPAEDVPF 106 Query: 161 VEGLFDVIVS 170 + G FD + + Sbjct: 107 LPGSFDAVTA 116 >gi|295129808|ref|YP_003580471.1| methyltransferase, HemK family [Propionibacterium acnes SK137] gi|291375527|gb|ADD99381.1| methyltransferase, HemK family [Propionibacterium acnes SK137] Length = 505 Score = 35.0 bits (79), Expect = 9.4, Method: Compositional matrix adjust. Identities = 37/132 (28%), Positives = 56/132 (42%), Gaps = 26/132 (19%) Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAK-----SNA---VTNGVSERFDTL 153 LD+G G G L L + + V D++ +ALE+A+ S+A + +G +D Sbjct: 170 LDMGCGCGVQSLHLSRHADHV--VATDVNPRALEMAQLTCRLSHADVDIRDG--SLYDPC 225 Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213 D FD+IV+NPPY+ + RD I +GG G + G Sbjct: 226 GHD-------TFDLIVTNPPYV-------MAPPSRDGQRLIYREGGFCGDGLVEAVVRGA 271 Query: 214 SRHLNKDGLCSV 225 LN G+ V Sbjct: 272 PARLNDGGMLQV 283 >gi|195953728|ref|YP_002122018.1| Methyltransferase type 11 [Hydrogenobaculum sp. Y04AAS1] gi|195933340|gb|ACG58040.1| Methyltransferase type 11 [Hydrogenobaculum sp. Y04AAS1] Length = 220 Score = 35.0 bits (79), Expect = 9.4, Method: Compositional matrix adjust. Identities = 16/39 (41%), Positives = 24/39 (61%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKS 139 +LD+GT TG V +++ G G+D+S K L+IAK Sbjct: 45 MLDIGTATGDVIFRAFEQNKIKTGFGIDLSIKMLKIAKQ 83 >gi|314965420|gb|EFT09519.1| methyltransferase small domain protein [Propionibacterium acnes HL082PA2] gi|315104888|gb|EFT76864.1| methyltransferase small domain protein [Propionibacterium acnes HL050PA2] gi|327329215|gb|EGE70975.1| putative transferase [Propionibacterium acnes HL103PA1] Length = 505 Score = 35.0 bits (79), Expect = 9.5, Method: Compositional matrix adjust. Identities = 37/132 (28%), Positives = 56/132 (42%), Gaps = 26/132 (19%) Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAK-----SNA---VTNGVSERFDTL 153 LD+G G G L L + + V D++ +ALE+A+ S+A + +G +D Sbjct: 170 LDMGCGCGVQSLHLSRHADHV--VATDVNPRALEMAQLTCRLSHADVDIRDG--SLYDPC 225 Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213 D FD+IV+NPPY+ + RD I +GG G + G Sbjct: 226 GHD-------TFDLIVTNPPYV-------MAPPSRDGQRLIYREGGFCGDGLVEAVVRGA 271 Query: 214 SRHLNKDGLCSV 225 LN G+ V Sbjct: 272 PARLNDGGMLQV 283 >gi|313765304|gb|EFS36668.1| methyltransferase small domain protein [Propionibacterium acnes HL013PA1] gi|314916043|gb|EFS79874.1| methyltransferase small domain protein [Propionibacterium acnes HL005PA4] gi|314917195|gb|EFS81026.1| methyltransferase small domain protein [Propionibacterium acnes HL050PA1] gi|314921694|gb|EFS85525.1| methyltransferase small domain protein [Propionibacterium acnes HL050PA3] gi|314931099|gb|EFS94930.1| methyltransferase small domain protein [Propionibacterium acnes HL067PA1] gi|314955032|gb|EFS99438.1| methyltransferase small domain protein [Propionibacterium acnes HL027PA1] gi|314959071|gb|EFT03173.1| methyltransferase small domain protein [Propionibacterium acnes HL002PA1] gi|314969708|gb|EFT13806.1| methyltransferase small domain protein [Propionibacterium acnes HL037PA1] gi|315101984|gb|EFT73960.1| methyltransferase small domain protein [Propionibacterium acnes HL046PA1] gi|315110093|gb|EFT82069.1| methyltransferase small domain protein [Propionibacterium acnes HL030PA2] gi|327454510|gb|EGF01165.1| methyltransferase small domain protein [Propionibacterium acnes HL087PA3] gi|327456580|gb|EGF03235.1| methyltransferase small domain protein [Propionibacterium acnes HL083PA2] gi|328755561|gb|EGF69177.1| methyltransferase small domain protein [Propionibacterium acnes HL087PA1] gi|328756890|gb|EGF70506.1| methyltransferase small domain protein [Propionibacterium acnes HL025PA2] Length = 505 Score = 35.0 bits (79), Expect = 9.5, Method: Compositional matrix adjust. Identities = 37/132 (28%), Positives = 56/132 (42%), Gaps = 26/132 (19%) Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAK-----SNA---VTNGVSERFDTL 153 LD+G G G L L + + V D++ +ALE+A+ S+A + +G +D Sbjct: 170 LDMGCGCGVQSLHLSRHADHV--VATDVNPRALEMAQLTCRLSHADVDIRDG--SLYDPC 225 Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213 D FD+IV+NPPY+ + RD I +GG G + G Sbjct: 226 GHD-------TFDLIVTNPPYV-------MAPPSRDGQRLIYREGGFCGDGLVEAVVRGA 271 Query: 214 SRHLNKDGLCSV 225 LN G+ V Sbjct: 272 PARLNDGGMLQV 283 >gi|313906027|ref|ZP_07839380.1| RNA cap guanine-N2 methyltransferase [Eubacterium cellulosolvens 6] gi|313469140|gb|EFR64489.1| RNA cap guanine-N2 methyltransferase [Eubacterium cellulosolvens 6] Length = 426 Score = 35.0 bits (79), Expect = 9.5, Method: Compositional matrix adjust. Identities = 28/80 (35%), Positives = 41/80 (51%), Gaps = 9/80 (11%) Query: 101 ILDLGTGTGAVCL-ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 +LD T TG+ L A L + + VD S A+E A+ NA NG+ +R D +D F Sbjct: 252 VLDCFTHTGSFGLNAALGGASHV--ISVDASELAIEQARKNAELNGLQDRIDYQCADVFE 309 Query: 160 SVEGL------FDVIVSNPP 173 + L FDV++ +PP Sbjct: 310 LLPNLERQGRSFDVVILDPP 329 >gi|225870014|ref|YP_002745961.1| methylase [Streptococcus equi subsp. equi 4047] gi|225699418|emb|CAW92895.1| putative methylase [Streptococcus equi subsp. equi 4047] Length = 179 Score = 35.0 bits (79), Expect = 9.5, Method: Compositional matrix adjust. Identities = 24/84 (28%), Positives = 43/84 (51%), Gaps = 4/84 (4%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+LDL G+G + + + + V V+ KA I ++N S++F L+ + Sbjct: 44 RVLDLFAGSGGLSIEAISRG-MSEAVLVERDRKAQAIIQANIKMTKASQQFTLLKMNAER 102 Query: 160 SVE---GLFDVIVSNPPYIESVIV 180 +++ G FDV+ +PPY + IV Sbjct: 103 ALDHLSGQFDVVFLDPPYAKETIV 126 >gi|313901576|ref|ZP_07835018.1| ribosomal L11 methyltransferase [Thermaerobacter subterraneus DSM 13965] gi|313468165|gb|EFR63637.1| ribosomal L11 methyltransferase [Thermaerobacter subterraneus DSM 13965] Length = 354 Score = 35.0 bits (79), Expect = 9.6, Method: Compositional matrix adjust. Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 3/51 (5%) Query: 101 ILDLGTGTGAVCLALLK-ESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150 +LD+GTG+G + +A + +P + +DI A+ +A NA NGV+ER Sbjct: 190 VLDVGTGSGILAIAAARLGAPRV--LAIDIDPVAVRVAGENAAANGVAERI 238 >gi|240138279|ref|YP_002962751.1| putative ubiE/COQ5 methyltransferase family enzyme [Methylobacterium extorquens AM1] gi|240008248|gb|ACS39474.1| putative ubiE/COQ5 methyltransferase family enzyme [Methylobacterium extorquens AM1] Length = 269 Score = 35.0 bits (79), Expect = 9.6, Method: Compositional matrix adjust. Identities = 22/80 (27%), Positives = 35/80 (43%), Gaps = 2/80 (2%) Query: 92 RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151 R++ + R+LDL TGTG + + + G DIS L A A G+ + Sbjct: 40 RLDPKPGERVLDLATGTGWTSRVVARRGA--QVTGADISADLLSFAAEQARAEGLDINYQ 97 Query: 152 TLQSDWFSSVEGLFDVIVSN 171 ++ +G FD I+S Sbjct: 98 LGDAERLPFADGAFDAIIST 117 >gi|165976967|ref|YP_001652560.1| ribosomal protein L11 methyltransferase [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|226705031|sp|B0BRD1|PRMA_ACTPJ RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11 Mtase gi|165877068|gb|ABY70116.1| ribosomal protein L11 methyltransferase [Actinobacillus pleuropneumoniae serovar 3 str. JL03] Length = 293 Score = 35.0 bits (79), Expect = 9.6, Method: Compositional matrix adjust. Identities = 23/72 (31%), Positives = 41/72 (56%), Gaps = 4/72 (5%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159 ++D G G+G + +A LK + +G+DI +A+ + +NA NGV++R L D Sbjct: 162 VIDFGCGSGILAIAALKLGAK-QAIGIDIDPQAILASGNNAEANGVADRLQLFLAKDQPQ 220 Query: 160 SVEGLFDVIVSN 171 ++ DV+V+N Sbjct: 221 DLQA--DVVVAN 230 >gi|311745184|ref|ZP_07718969.1| methyltransferase [Algoriphagus sp. PR1] gi|126577706|gb|EAZ81926.1| methyltransferase [Algoriphagus sp. PR1] Length = 264 Score = 35.0 bits (79), Expect = 9.6, Method: Compositional matrix adjust. Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 2/69 (2%) Query: 74 PRPETELLVDSALAFSL--PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131 P + L+ + + SL PRI+ +L++G+G GA L+ P K VD Sbjct: 10 PEEQERLVEQAGILGSLIYPRIDFEGCKHVLEIGSGVGAQTKVLISLFPDLKITCVDAES 69 Query: 132 KALEIAKSN 140 K LE AK+N Sbjct: 70 KQLEKAKAN 78 >gi|50841731|ref|YP_054958.1| putative transferase [Propionibacterium acnes KPA171202] gi|289424689|ref|ZP_06426472.1| methyltransferase small domain protein [Propionibacterium acnes SK187] gi|50839333|gb|AAT82000.1| putative transferase [Propionibacterium acnes KPA171202] gi|289155386|gb|EFD04068.1| methyltransferase small domain protein [Propionibacterium acnes SK187] gi|313793197|gb|EFS41264.1| methyltransferase small domain protein [Propionibacterium acnes HL110PA1] gi|313802714|gb|EFS43932.1| methyltransferase small domain protein [Propionibacterium acnes HL110PA2] gi|313814581|gb|EFS52295.1| methyltransferase small domain protein [Propionibacterium acnes HL025PA1] gi|314964609|gb|EFT08709.1| methyltransferase small domain protein [Propionibacterium acnes HL082PA1] gi|315078373|gb|EFT50404.1| methyltransferase small domain protein [Propionibacterium acnes HL053PA2] gi|315082159|gb|EFT54135.1| methyltransferase small domain protein [Propionibacterium acnes HL078PA1] gi|315106317|gb|EFT78293.1| methyltransferase small domain protein [Propionibacterium acnes HL030PA1] gi|327457146|gb|EGF03801.1| methyltransferase small domain protein [Propionibacterium acnes HL092PA1] Length = 505 Score = 35.0 bits (79), Expect = 9.6, Method: Compositional matrix adjust. Identities = 37/132 (28%), Positives = 56/132 (42%), Gaps = 26/132 (19%) Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAK-----SNA---VTNGVSERFDTL 153 LD+G G G L L + + V D++ +ALE+A+ S+A + +G +D Sbjct: 170 LDMGCGCGVQSLHLSRHADHV--VATDVNPRALEMAQLTCRLSHADVDIRDG--SLYDPC 225 Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213 D FD+IV+NPPY+ + RD I +GG G + G Sbjct: 226 GHD-------TFDLIVTNPPYV-------MAPPSRDGQRLIYREGGFCGDGLVEAVVRGA 271 Query: 214 SRHLNKDGLCSV 225 LN G+ V Sbjct: 272 PARLNDGGMLQV 283 >gi|315094236|gb|EFT66212.1| methyltransferase small domain protein [Propionibacterium acnes HL060PA1] Length = 505 Score = 35.0 bits (79), Expect = 9.7, Method: Compositional matrix adjust. Identities = 37/132 (28%), Positives = 56/132 (42%), Gaps = 26/132 (19%) Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAK-----SNA---VTNGVSERFDTL 153 LD+G G G L L + + V D++ +ALE+A+ S+A + +G +D Sbjct: 170 LDMGCGCGVQSLHLSRHADHV--VATDVNPRALEMAQLTCRLSHADVDIRDG--SLYDPC 225 Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213 D FD+IV+NPPY+ + RD I +GG G + G Sbjct: 226 GHD-------TFDLIVTNPPYV-------MAPPSRDGQRLIYREGGFCGDGLVEAVVRGA 271 Query: 214 SRHLNKDGLCSV 225 LN G+ V Sbjct: 272 PARLNDGGMLQV 283 >gi|282853294|ref|ZP_06262631.1| methyltransferase small domain protein [Propionibacterium acnes J139] gi|282582747|gb|EFB88127.1| methyltransferase small domain protein [Propionibacterium acnes J139] gi|314982831|gb|EFT26923.1| methyltransferase small domain protein [Propionibacterium acnes HL110PA3] gi|315091150|gb|EFT63126.1| methyltransferase small domain protein [Propionibacterium acnes HL110PA4] Length = 505 Score = 35.0 bits (79), Expect = 9.7, Method: Compositional matrix adjust. Identities = 37/132 (28%), Positives = 56/132 (42%), Gaps = 26/132 (19%) Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAK-----SNA---VTNGVSERFDTL 153 LD+G G G L L + + V D++ +ALE+A+ S+A + +G +D Sbjct: 170 LDMGCGCGVQSLHLSRHADHV--VATDVNPRALEMAQLTCRLSHADVDIRDG--SLYDPC 225 Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213 D FD+IV+NPPY+ + RD I +GG G + G Sbjct: 226 GHD-------TFDLIVTNPPYV-------MAPPSRDGQRLIYREGGFCGDGLVEAVVRGA 271 Query: 214 SRHLNKDGLCSV 225 LN G+ V Sbjct: 272 PARLNDGGMLQV 283 >gi|326318108|ref|YP_004235780.1| type 12 methyltransferase [Acidovorax avenae subsp. avenae ATCC 19860] gi|323374944|gb|ADX47213.1| Methyltransferase type 12 [Acidovorax avenae subsp. avenae ATCC 19860] Length = 436 Score = 35.0 bits (79), Expect = 9.7, Method: Compositional matrix adjust. Identities = 30/105 (28%), Positives = 46/105 (43%), Gaps = 23/105 (21%) Query: 84 SALAFSLPRIEKRDVVR--------ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135 + L + LP+I ++ +LDLG GTG + + L + F +GVDIS K +E Sbjct: 254 AGLKYKLPKIAAAKILERYPDKRLNVLDLGCGTGLLGVCLGRLDGFL--IGVDISIKMIE 311 Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180 A + V +RF T+ L D + P I V+ Sbjct: 312 ----QAARHNVYDRFHTVN---------LLDALRDTPSSIYDVVT 343 >gi|288940571|ref|YP_003442811.1| 50S ribosomal protein L11 methyltransferase [Allochromatium vinosum DSM 180] gi|288895943|gb|ADC61779.1| ribosomal protein L11 methyltransferase [Allochromatium vinosum DSM 180] Length = 291 Score = 35.0 bits (79), Expect = 9.7, Method: Compositional matrix adjust. Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 3/71 (4%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 +LD G G+G + +A LK + + VD +AL NA NGV +R + + F+ Sbjct: 162 VLDFGCGSGILAIAALKLG-AARAIAVDHDPQALTATHDNAQANGVLDRLEIFAPESFTD 220 Query: 161 VEGLFDVIVSN 171 D++++N Sbjct: 221 PS--VDIVLAN 229 >gi|148554236|ref|YP_001261818.1| 50S ribosomal protein L11P methyltransferase [Sphingomonas wittichii RW1] gi|148499426|gb|ABQ67680.1| LSU ribosomal protein L11P methyltransferase [Sphingomonas wittichii RW1] Length = 325 Score = 35.0 bits (79), Expect = 9.7, Method: Compositional matrix adjust. Identities = 18/47 (38%), Positives = 25/47 (53%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147 I D+GTGTG + A P + + DI ++E+ NA NGVS Sbjct: 180 IADIGTGTGLLAFAARTLWPAARVIASDIDPVSIEVTAENAAVNGVS 226 >gi|87199299|ref|YP_496556.1| putative methyltransferase [Novosphingobium aromaticivorans DSM 12444] gi|87134980|gb|ABD25722.1| putative methyltransferase [Novosphingobium aromaticivorans DSM 12444] Length = 275 Score = 35.0 bits (79), Expect = 9.7, Method: Compositional matrix adjust. Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 5/73 (6%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA--KSNAVTNGVSERFDTLQSDW 157 R++D+G G G V LA+ + P + +GVD+S ++ A ++ A+ N E D S W Sbjct: 44 RVVDIGCGAGEVSLAVARARPQAQVIGVDVSPDLVDAARGRAGALPNLSFELADA--SSW 101 Query: 158 FSSVEGLFDVIVS 170 +S +G D+ VS Sbjct: 102 -TSPQGAPDLYVS 113 >gi|15920667|ref|NP_376336.1| hypothetical protein ST0455 [Sulfolobus tokodaii str. 7] gi|15621450|dbj|BAB65445.1| 201aa long conserved hypothetical protein [Sulfolobus tokodaii str. 7] Length = 201 Score = 35.0 bits (79), Expect = 9.7, Method: Compositional matrix adjust. Identities = 34/123 (27%), Positives = 58/123 (47%), Gaps = 20/123 (16%) Query: 59 DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118 ++ ++ L+ +T+EP +T LL+D + +I K + +++D+GTGTG + L L Sbjct: 8 EYNKYKICLNDETYEPSDDTGLLLD------IIKINKGE--KVIDIGTGTGILGLHSL-- 57 Query: 119 SPFFKG----VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNP 172 F+G + VDI+ A E + + L D FDV + NP Sbjct: 58 ---FQGAKEVIFVDINPFATEATLCTLRMYPFTS-YHILNCDLMECFRHNVNFDVAIFNP 113 Query: 173 PYI 175 PY+ Sbjct: 114 PYL 116 >gi|328758427|gb|EGF72043.1| methyltransferase, HemK family [Propionibacterium acnes HL020PA1] Length = 505 Score = 35.0 bits (79), Expect = 9.7, Method: Compositional matrix adjust. Identities = 37/132 (28%), Positives = 56/132 (42%), Gaps = 26/132 (19%) Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAK-----SNA---VTNGVSERFDTL 153 LD+G G G L L + + V D++ +ALE+A+ S+A + +G +D Sbjct: 170 LDMGCGCGVQSLHLSRHADHV--VATDVNPRALEMAQLTCRLSHADVDIRDG--SLYDPC 225 Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213 D FD+IV+NPPY+ + RD I +GG G + G Sbjct: 226 GHD-------TFDLIVTNPPYV-------MAPPSRDGQRLIYREGGFCGDGLVEAVVRGA 271 Query: 214 SRHLNKDGLCSV 225 LN G+ V Sbjct: 272 PARLNDGGMLQV 283 >gi|32470475|ref|NP_863160.1| hypothetical protein pRUM_p17 [Enterococcus faecium] gi|57854766|ref|YP_187543.1| UbiE/COQ5 family methlytransferase [Staphylococcus epidermidis RP62A] gi|69244933|ref|ZP_00603123.1| putative methyltransferase [Enterococcus faecium DO] gi|146318610|ref|YP_001198322.1| hypothetical protein SSU05_0956 [Streptococcus suis 05ZYH33] gi|146320810|ref|YP_001200521.1| hypothetical protein SSU98_0963 [Streptococcus suis 98HAH33] gi|227518290|ref|ZP_03948339.1| SAM-dependent methyltransferase [Enterococcus faecalis TX0104] gi|253751731|ref|YP_003024872.1| methyltransferase [Streptococcus suis SC84] gi|255976298|ref|ZP_05426884.1| conserved hypothetical protein [Enterococcus faecalis T2] gi|256963309|ref|ZP_05567480.1| methyltransferase [Enterococcus faecalis HIP11704] gi|257080183|ref|ZP_05574544.1| conserved hypothetical protein [Enterococcus faecalis JH1] gi|257086923|ref|ZP_05581284.1| methyltransferase [Enterococcus faecalis D6] gi|257090930|ref|ZP_05585291.1| methyltransferase [Enterococcus faecalis CH188] gi|257880797|ref|ZP_05660450.1| methyltransferase [Enterococcus faecium 1,230,933] gi|257883440|ref|ZP_05663093.1| methyltransferase [Enterococcus faecium 1,231,502] gi|257892141|ref|ZP_05671794.1| methyltransferase [Enterococcus faecium 1,231,410] gi|257895028|ref|ZP_05674681.1| methyltransferase [Enterococcus faecium 1,231,408] gi|258615889|ref|ZP_05713659.1| putative methyltransferase [Enterococcus faecium DO] gi|260558610|ref|ZP_05830800.1| methyltransferase [Enterococcus faecium C68] gi|261206731|ref|ZP_05921424.1| methyltransferase [Enterococcus faecium TC 6] gi|289168544|ref|YP_003446813.1| methyltransferase [Streptococcus mitis B6] gi|289567518|ref|ZP_06447866.1| methyltransferase [Enterococcus faecium D344SRF] gi|293384191|ref|ZP_06630083.1| methyltransferase, UbiE/COQ5 family [Enterococcus faecalis R712] gi|293387991|ref|ZP_06632523.1| methyltransferase, UbiE/COQ5 family [Enterococcus faecalis S613] gi|294622856|ref|ZP_06701798.1| methyltransferase, UbiE/COQ5 family [Enterococcus faecium U0317] gi|296449282|ref|ZP_06891067.1| UbiE/COQ5 family methyltransferase [Clostridium difficile NAP08] gi|307269463|ref|ZP_07550803.1| methyltransferase domain protein [Enterococcus faecalis TX4248] gi|307283563|ref|ZP_07563746.1| methyltransferase domain protein [Enterococcus faecalis TX0860] gi|312907074|ref|ZP_07766068.1| methyltransferase domain protein [Enterococcus faecalis DAPTO 512] gi|312909730|ref|ZP_07768580.1| methyltransferase domain protein [Enterococcus faecalis DAPTO 516] gi|314940271|ref|ZP_07847443.1| methyltransferase domain protein [Enterococcus faecium TX0133a04] gi|314943576|ref|ZP_07850336.1| methyltransferase domain protein [Enterococcus faecium TX0133C] gi|314948325|ref|ZP_07851716.1| methyltransferase domain protein [Enterococcus faecium TX0082] gi|314953219|ref|ZP_07856162.1| methyltransferase domain protein [Enterococcus faecium TX0133A] gi|314994383|ref|ZP_07859674.1| methyltransferase domain protein [Enterococcus faecium TX0133B] gi|314996090|ref|ZP_07861165.1| methyltransferase domain protein [Enterococcus faecium TX0133a01] gi|320152803|ref|YP_004172626.1| methyltransferase [Enterococcus faecium] gi|11991164|gb|AAG42231.1|AF299292_5 ORFY [Staphylococcus intermedius] gi|15667878|gb|AAL05548.1|AF408195_4 unknown [Enterococcus faecalis] gi|21886752|gb|AAM77895.1|AF516335_15 unknown [Enterococcus faecium] gi|28849336|gb|AAO52843.1| hypothetical protein [Enterococcus faecium] gi|57635999|gb|AAW52788.1| methyltransferase, UbiE/COQ5 family [Staphylococcus epidermidis RP62A] gi|68196099|gb|EAN10530.1| putative methyltransferase [Enterococcus faecium DO] gi|110556096|dbj|BAE98115.1| hypothetical protein [Enterococcus faecalis] gi|145689416|gb|ABP89922.1| hypothetical protein SSU05_0956 [Streptococcus suis 05ZYH33] gi|145691616|gb|ABP92121.1| hypothetical protein SSU98_0963 [Streptococcus suis 98HAH33] gi|227074276|gb|EEI12239.1| SAM-dependent methyltransferase [Enterococcus faecalis TX0104] gi|251816020|emb|CAZ51640.1| putative methyltransferase [Streptococcus suis SC84] gi|255969170|gb|EET99792.1| conserved hypothetical protein [Enterococcus faecalis T2] gi|256953805|gb|EEU70437.1| methyltransferase [Enterococcus faecalis HIP11704] gi|256988213|gb|EEU75515.1| conserved hypothetical protein [Enterococcus faecalis JH1] gi|256994953|gb|EEU82255.1| methyltransferase [Enterococcus faecalis D6] gi|256999742|gb|EEU86262.1| methyltransferase [Enterococcus faecalis CH188] gi|257815025|gb|EEV43783.1| methyltransferase [Enterococcus faecium 1,230,933] gi|257819098|gb|EEV46426.1| methyltransferase [Enterococcus faecium 1,231,502] gi|257828501|gb|EEV55127.1| methyltransferase [Enterococcus faecium 1,231,410] gi|257831407|gb|EEV58014.1| methyltransferase [Enterococcus faecium 1,231,408] gi|260075348|gb|EEW63660.1| methyltransferase [Enterococcus faecium C68] gi|260079032|gb|EEW66730.1| methyltransferase [Enterococcus faecium TC 6] gi|281336196|gb|ADA62745.1| methyltransferase, UbiE/COQ5 family [Enterococcus faecium] gi|288908111|emb|CBJ22951.1| methyltransferase [Streptococcus mitis B6] gi|289160689|gb|EFD08641.1| methyltransferase [Enterococcus faecium D344SRF] gi|291078476|gb|EFE15840.1| methyltransferase, UbiE/COQ5 family [Enterococcus faecalis R712] gi|291082601|gb|EFE19564.1| methyltransferase, UbiE/COQ5 family [Enterococcus faecalis S613] gi|291597690|gb|EFF28840.1| methyltransferase, UbiE/COQ5 family [Enterococcus faecium U0317] gi|296261881|gb|EFH08691.1| UbiE/COQ5 family methyltransferase [Clostridium difficile NAP08] gi|306503587|gb|EFM72828.1| methyltransferase domain protein [Enterococcus faecalis TX0860] gi|306514211|gb|EFM82786.1| methyltransferase domain protein [Enterococcus faecalis TX4248] gi|310626908|gb|EFQ10191.1| methyltransferase domain protein [Enterococcus faecalis DAPTO 512] gi|311289958|gb|EFQ68514.1| methyltransferase domain protein [Enterococcus faecalis DAPTO 516] gi|313589717|gb|EFR68562.1| methyltransferase domain protein [Enterococcus faecium TX0133a01] gi|313591215|gb|EFR70060.1| methyltransferase domain protein [Enterococcus faecium TX0133B] gi|313594726|gb|EFR73571.1| methyltransferase domain protein [Enterococcus faecium TX0133A] gi|313597743|gb|EFR76588.1| methyltransferase domain protein [Enterococcus faecium TX0133C] gi|313640515|gb|EFS05095.1| methyltransferase domain protein [Enterococcus faecium TX0133a04] gi|313645242|gb|EFS09822.1| methyltransferase domain protein [Enterococcus faecium TX0082] gi|315026302|gb|EFT38234.1| methyltransferase domain protein [Enterococcus faecalis TX2137] gi|315163445|gb|EFU07462.1| methyltransferase domain protein [Enterococcus faecalis TX0645] gi|315163604|gb|EFU07621.1| methyltransferase domain protein [Enterococcus faecalis TX1302] gi|319739755|gb|ADV60073.1| methyltransferase [Enterococcus faecium] gi|323464895|gb|ADX77048.1| putative methyltransferase [Staphylococcus pseudintermedius ED99] Length = 244 Score = 35.0 bits (79), Expect = 9.7, Method: Compositional matrix adjust. Identities = 20/39 (51%), Positives = 25/39 (64%), Gaps = 1/39 (2%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAK 138 R+LDLG G G C+ + E+ VGVDIS K LE+AK Sbjct: 45 RVLDLGCGYGWHCIYAM-ENGASSVVGVDISHKMLEVAK 82 >gi|297193024|ref|ZP_06910422.1| rRNA or tRNA methyltransferase [Streptomyces pristinaespiralis ATCC 25486] gi|197719846|gb|EDY63754.1| rRNA or tRNA methyltransferase [Streptomyces pristinaespiralis ATCC 25486] Length = 484 Score = 35.0 bits (79), Expect = 9.8, Method: Compositional matrix adjust. Identities = 35/121 (28%), Positives = 51/121 (42%), Gaps = 15/121 (12%) Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 LDLGTG+G L + + + D++ +AL + +G E D + F V Sbjct: 148 LDLGTGSGIQALHAAQHA--TRVTATDLNPRALHFTRLTLALSGARE-ADLREGSLFEPV 204 Query: 162 -EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220 +D+IVSNPP+ VI L R DGG+ G R++ LN Sbjct: 205 GSDTYDLIVSNPPF---VISPGARLTYR--------DGGMGGDDLCRSLVQQAGDRLNDG 253 Query: 221 G 221 G Sbjct: 254 G 254 >gi|51594888|ref|YP_069079.1| type I restriction-modification system, methyltransferase subunit (N-6 DNA methylase) [Yersinia pseudotuberculosis IP 32953] gi|51588170|emb|CAH19777.1| putative type I restriction-modification system, methyltransferase subunit (N-6 DNA Methylase) [Yersinia pseudotuberculosis IP 32953] Length = 863 Score = 35.0 bits (79), Expect = 9.8, Method: Composition-based stats. Identities = 31/141 (21%), Positives = 60/141 (42%), Gaps = 30/141 (21%) Query: 77 ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL-------LKESPFFKGVGVDI 129 E +L+ + +A+ L + +D ++I D +G+G++ + + K ++ Sbjct: 192 EVSVLMSNIIAYEL---KHKDTIKIYDPTSGSGSLLINIGEAFEKYAKNKDSITYYAQEL 248 Query: 130 SCKALEIAKSNAVTNGV------SERFDTLQSDW----FSSVEGLF-----DVIVSNPPY 174 + + N + G+ + DTL+ DW S +G + D +VSNPPY Sbjct: 249 KANTYNLTRMNLIMRGIKASNIKTRNGDTLEDDWPFFDDSDPQGSYYALHVDAVVSNPPY 308 Query: 175 IESVIVDCLGLEVRDFDPRIS 195 ++ +D DPR S Sbjct: 309 SQN-----WDPSFKDSDPRYS 324 >gi|21219557|ref|NP_625336.1| hypothetical protein SCO1041 [Streptomyces coelicolor A3(2)] gi|8894830|emb|CAB96026.1| conserved hypothetical protein SCG20A.21 [Streptomyces coelicolor A3(2)] Length = 407 Score = 35.0 bits (79), Expect = 9.8, Method: Compositional matrix adjust. Identities = 22/76 (28%), Positives = 41/76 (53%), Gaps = 1/76 (1%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R++DLG G G V A+ P + + D S +A+ A++ N V+ + + D + Sbjct: 266 RVVDLGCGNGVVGTAVSLADPDAELLFTDESFQAVASARATYRANEVAGQAEFRVGDGLA 325 Query: 160 SV-EGLFDVIVSNPPY 174 V +G D++++NPP+ Sbjct: 326 GVPDGSVDLVLNNPPF 341 >gi|153948702|ref|YP_001402490.1| type I restriction-modification system, M subunit [Yersinia pseudotuberculosis IP 31758] gi|152960197|gb|ABS47658.1| type I restriction-modification system, M subunit [Yersinia pseudotuberculosis IP 31758] Length = 863 Score = 35.0 bits (79), Expect = 9.8, Method: Composition-based stats. Identities = 31/141 (21%), Positives = 60/141 (42%), Gaps = 30/141 (21%) Query: 77 ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL-------LKESPFFKGVGVDI 129 E +L+ + +A+ L + +D ++I D +G+G++ + + K ++ Sbjct: 192 EVSVLMSNIIAYEL---KHKDTIKIYDPTSGSGSLLINIGEAFEKYAKNKDSITYYAQEL 248 Query: 130 SCKALEIAKSNAVTNGV------SERFDTLQSDW----FSSVEGLF-----DVIVSNPPY 174 + + N + G+ + DTL+ DW S +G + D +VSNPPY Sbjct: 249 KANTYNLTRMNLIMRGIKASNIKTRNGDTLEDDWPFFDDSDPQGSYYALHVDAVVSNPPY 308 Query: 175 IESVIVDCLGLEVRDFDPRIS 195 ++ +D DPR S Sbjct: 309 SQN-----WDPSFKDSDPRYS 324 >gi|325269725|ref|ZP_08136336.1| ribosomal protein L11 methyltransferase [Prevotella multiformis DSM 16608] gi|324987926|gb|EGC19898.1| ribosomal protein L11 methyltransferase [Prevotella multiformis DSM 16608] Length = 288 Score = 35.0 bits (79), Expect = 9.9, Method: Compositional matrix adjust. Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 5/74 (6%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW-- 157 R+LD G GTG + + K + V DI ++ A+ NA NGV D L+ D Sbjct: 154 RVLDCGCGTGILSIVAAK-CGAKEAVCYDIDEWSVRNAQHNAELNGV--EIDVLEGDKSV 210 Query: 158 FSSVEGLFDVIVSN 171 S + G+FD+I++N Sbjct: 211 LSHISGVFDIIMAN 224 >gi|298530216|ref|ZP_07017618.1| ribosomal L11 methyltransferase [Desulfonatronospira thiodismutans ASO3-1] gi|298509590|gb|EFI33494.1| ribosomal L11 methyltransferase [Desulfonatronospira thiodismutans ASO3-1] Length = 295 Score = 35.0 bits (79), Expect = 9.9, Method: Compositional matrix adjust. Identities = 21/50 (42%), Positives = 29/50 (58%), Gaps = 2/50 (4%) Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151 LDLGTG+G + +A + G+GVDI A+E A+ N N V E F+ Sbjct: 149 LDLGTGSGILGIACSRLG--MSGLGVDIDPVAVENAQENTRINRVGEMFE 196 >gi|171185152|ref|YP_001794071.1| putative RNA methylase [Thermoproteus neutrophilus V24Sta] gi|170934364|gb|ACB39625.1| putative RNA methylase [Thermoproteus neutrophilus V24Sta] Length = 224 Score = 35.0 bits (79), Expect = 10.0, Method: Compositional matrix adjust. Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 9/75 (12%) Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 R+ + GTGA+ + + + VG D+ KAL+IAK N R D + SD Sbjct: 95 RVWEPFVGTGAIAYEVERAGGYV--VGGDVDEKALKIAKLNI-------RGDVVLSDVLL 145 Query: 160 SVEGLFDVIVSNPPY 174 FD +V +PPY Sbjct: 146 PPVSKFDAVVGDPPY 160 >gi|134099157|ref|YP_001104818.1| SAM-dependent O-methyltransferase [Saccharopolyspora erythraea NRRL 2338] gi|133911780|emb|CAM01893.1| SAM-dependent O-methyltransferase [Saccharopolyspora erythraea NRRL 2338] Length = 412 Score = 35.0 bits (79), Expect = 10.0, Method: Compositional matrix adjust. Identities = 20/72 (27%), Positives = 39/72 (54%), Gaps = 7/72 (9%) Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVD---ISCKALEIAKSNAVTNGVSERFDTLQSDW 157 ++D+G G G + A+L+E+P G+ D +SC A+ + + + RF ++ D+ Sbjct: 225 VVDIGGGNGTLLRAILRENPEVSGILFDREHVSCNAVAEHEDASYRS----RFSSVAGDF 280 Query: 158 FSSVEGLFDVIV 169 F+ V G D+ + Sbjct: 281 FAEVPGSGDIYL 292 >gi|154251180|ref|YP_001412004.1| O-methyltransferase [Parvibaculum lavamentivorans DS-1] gi|154155130|gb|ABS62347.1| O-methyltransferase [Parvibaculum lavamentivorans DS-1] Length = 260 Score = 35.0 bits (79), Expect = 10.0, Method: Compositional matrix adjust. Identities = 25/98 (25%), Positives = 41/98 (41%), Gaps = 12/98 (12%) Query: 86 LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145 LA S+P R+ R L+ G G G L L + G+++ + +A N NG Sbjct: 38 LAASVP---AREGERALEAGAGVGVASLCLASRVSGLEVAGIELQPELARLASENIARNG 94 Query: 146 VSERFDTLQSDWFSSVEGLFDV---------IVSNPPY 174 ++ER + D V L + + +NPP+ Sbjct: 95 LAERVSIVTGDIGHPVRNLAAMGLEPNGWHHVFANPPF 132 Searching..................................................done Results from round 2 >gi|254780875|ref|YP_003065288.1| protoporphyrinogen oxidase (methyltransferase) protein [Candidatus Liberibacter asiaticus str. psy62] gi|254040552|gb|ACT57348.1| protoporphyrinogen oxidase (methyltransferase) protein [Candidatus Liberibacter asiaticus str. psy62] Length = 264 Score = 382 bits (981), Expect = e-104, Method: Composition-based stats. Identities = 264/264 (100%), Positives = 264/264 (100%) Query: 1 MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60 MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF Sbjct: 1 MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60 Query: 61 YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120 YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP Sbjct: 61 YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV Sbjct: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE Sbjct: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 Query: 241 SRKLFLVNAFKDYGGNDRVLLFCR 264 SRKLFLVNAFKDYGGNDRVLLFCR Sbjct: 241 SRKLFLVNAFKDYGGNDRVLLFCR 264 >gi|315122703|ref|YP_004063192.1| protoporphyrinogen oxidase (methyltransferase) protein [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313496105|gb|ADR52704.1| protoporphyrinogen oxidase (methyltransferase) protein [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 293 Score = 332 bits (852), Expect = 3e-89, Method: Composition-based stats. Identities = 189/264 (71%), Positives = 222/264 (84%) Query: 1 MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60 +Q LR+ SFLC VTGLSS QVI PD++LDD QR L A++RSL +ESIHRI GWRDF Sbjct: 30 LQGLRNPRSFLCGVTGLSSCQVIACPDTILDDEQRLLLKKAVIRSLNYESIHRICGWRDF 89 Query: 61 YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120 YNVRL LSSDTFEPRPETELLVDS L+F L + K+ RILDLG G+GA+CLALLKE+ Sbjct: 90 YNVRLALSSDTFEPRPETELLVDSILSFFLSQRGKKKDARILDLGMGSGAICLALLKENS 149 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180 FF+G+GVDIS KALEIA+ NAV NG+S+RF LQS+WFSS+EG FD+IVSNPPYIES +V Sbjct: 150 FFEGLGVDISSKALEIARKNAVANGLSKRFSALQSNWFSSIEGFFDIIVSNPPYIESAVV 209 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 D LG EV++FDP I+LDGG DGLSHYR IADGVSRHL+K+G C +EIGYNQK+DV+RIFE Sbjct: 210 DKLGPEVKNFDPVIALDGGPDGLSHYRVIADGVSRHLSKNGFCGLEIGYNQKIDVIRIFE 269 Query: 241 SRKLFLVNAFKDYGGNDRVLLFCR 264 +KLFLVN+FKDY NDR+LLFCR Sbjct: 270 DKKLFLVNSFKDYEKNDRILLFCR 293 >gi|303240124|ref|ZP_07326645.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Acetivibrio cellulolyticus CD2] gi|302592393|gb|EFL62120.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Acetivibrio cellulolyticus CD2] Length = 296 Score = 316 bits (810), Expect = 3e-84, Method: Composition-based stats. Identities = 90/259 (34%), Positives = 144/259 (55%), Gaps = 6/259 (2%) Query: 7 SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66 + + LC V G + D +L++ Q AI R + E + I G ++F ++ Sbjct: 41 AGAILCHVLGCDKAYLYSHDDYILNNSQFNSFLEAIKRRINGEPLQYITGSQEFMSLDFI 100 Query: 67 LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126 +S D PR +TE+LV+S + F+ + + ILD+GTG+G + ++L + Sbjct: 101 VSPDVLIPRQDTEILVESVIQFA----SGKGNIDILDVGTGSGCIAISLAYFIKNSRVTA 156 Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGL 185 VDIS ALE+A+ NA GV +R ++S+ F +V G FD+IVSNPPYI ++ L Sbjct: 157 VDISKGALEMARKNAQKCGVEDRITFIESNLFDNVTSGDFDIIVSNPPYIPVQDIETLEK 216 Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245 +V+DF+PR +LDGG DGL YR I R+L +GL + E+GY+Q +V++I + Sbjct: 217 QVKDFEPRSALDGGCDGLDFYRRITKDSIRYLKPNGLLAFEVGYDQSQEVLKIMKDS-FD 275 Query: 246 LVNAFKDYGGNDRVLLFCR 264 + +D G +RV++ R Sbjct: 276 NLKIERDLAGIERVVMGIR 294 >gi|326202287|ref|ZP_08192156.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Clostridium papyrosolvens DSM 2782] gi|325987405|gb|EGD48232.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Clostridium papyrosolvens DSM 2782] Length = 284 Score = 312 bits (800), Expect = 3e-83, Method: Composition-based stats. Identities = 85/263 (32%), Positives = 141/263 (53%), Gaps = 5/263 (1%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 ++++ LC+V + D L +R L N + + K+ + I+G +F + Sbjct: 22 PVQEAGVMLCQVLNCGRAYLYAHGDRELSTDERAVLDNMLAQRAKNTPLQYIIGDTEFMS 81 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 ++ ++ PR +TE+LV+ + L + +++LD+ TG+G + +++ P Sbjct: 82 LKFIVTPAVLIPRQDTEVLVEKVIE--LAKKSSNAGLKVLDMCTGSGCIAVSIAHFCPES 139 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIV 180 V DIS +A+++AK+N+ NGV R + D F +++G FD IVSNPPYIE+ I+ Sbjct: 140 SIVACDISEEAIKVAKANSDLNGVQNRVEFFCGDLFEALKGSYKFDFIVSNPPYIETEII 199 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 L EVR ++P ++LDGG DGL Y+ I +LN G + EIG+NQ V + E Sbjct: 200 IGLQKEVRSYEPELALDGGADGLDFYKIITVKAPEYLNNLGWLAFEIGFNQGERVSALME 259 Query: 241 SRKLFLVNAFKDYGGNDRVLLFC 263 + KDYGGNDRV++ Sbjct: 260 ES-FINIQVIKDYGGNDRVVIGQ 281 >gi|240147056|ref|ZP_04745657.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Roseburia intestinalis L1-82] gi|257200779|gb|EEU99063.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Roseburia intestinalis L1-82] gi|291538248|emb|CBL11359.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Roseburia intestinalis XB6B4] Length = 281 Score = 311 bits (797), Expect = 7e-83, Method: Composition-based stats. Identities = 86/259 (33%), Positives = 131/259 (50%), Gaps = 8/259 (3%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 A D+ L V + + + + + Q A+ + +H + I+G +F Sbjct: 21 DAKIDAWLLLEMVCKIDRSFYYLHMEDEVAEEQLSEYEIALRKRAEHVPLQYIVGEAEFM 80 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 ++ ++S+ PR +TE LV+ AL P +++LDL TG+G + ++++ P Sbjct: 81 GLKFKVNSNVLIPRQDTETLVEEALKVVKP------GMKVLDLCTGSGCIIVSIVHNVPE 134 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181 +G DIS +AL +AK NA N VS F+ +SD F +V G +DVIVSNPPYI + V Sbjct: 135 VEGTATDISKQALLVAKENAKLNQVSVTFE--RSDLFDNVTGTYDVIVSNPPYIRTGEVV 192 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 L EV++F+P +LDG DGL YR I +L G EIGY+Q V + + Sbjct: 193 KLMPEVQEFEPMEALDGKEDGLYFYRKIIKECKAYLKPGGHILFEIGYDQGEAVSGLLKE 252 Query: 242 RKLFLVNAFKDYGGNDRVL 260 V KD NDRV+ Sbjct: 253 AGFKNVTVIKDLAHNDRVV 271 >gi|209551099|ref|YP_002283016.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209536855|gb|ACI56790.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 286 Score = 311 bits (797), Expect = 8e-83, Method: Composition-based stats. Identities = 122/262 (46%), Positives = 164/262 (62%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 D+ + + LS +++ L Q L+ A+ R L HE +HRILG R+FY Sbjct: 23 DPATDARLLVAGLLKLSPTELLTRSAERLSPEQAEVLSKAVERRLGHEPVHRILGEREFY 82 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 + L LS++T EPRP+TE+LVD+ LA +++ + ILD+GTGTGA+CLALL E P Sbjct: 83 GLPLALSAETLEPRPDTEILVDTVLACLKDLAKEQSHLHILDVGTGTGAICLALLSECPD 142 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181 GVG DIS AL A+SNA NG+ +RF +QS WF S++G F IVSNPPYI S ++ Sbjct: 143 ASGVGSDISADALRTARSNAERNGLQDRFQAVQSRWFESIQGSFHAIVSNPPYIASNVIH 202 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 L EV FDP +LDGG DGL YR IA +R + DG+ +EIGY+Q+ DV IFE+ Sbjct: 203 DLAPEVTKFDPVAALDGGPDGLDAYRAIAKDAARFMRPDGVVGLEIGYDQRNDVTAIFEA 262 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 + + + KDYG NDRVL+F Sbjct: 263 KGFKCLKSVKDYGQNDRVLVFA 284 >gi|291535753|emb|CBL08865.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Roseburia intestinalis M50/1] Length = 281 Score = 311 bits (797), Expect = 8e-83, Method: Composition-based stats. Identities = 85/259 (32%), Positives = 131/259 (50%), Gaps = 8/259 (3%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 A D+ L V + + + + + Q A+ + +H + I+G +F Sbjct: 21 DAKIDAWLLLEMVCKIDRSFYYLHMEDEVAEEQLSEYEIALRKRAEHVPLQYIVGEAEFM 80 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 ++ ++S+ PR +TE LV+ AL P +++LD+ TG+G + ++++ P Sbjct: 81 GLKFKVNSNVLIPRQDTETLVEEALKVVKP------GMKVLDMCTGSGCIIVSIVHNIPE 134 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181 +G DIS +AL +AK NA N VS F+ +SD F +V G +DVIVSNPPYI + V Sbjct: 135 VEGTATDISKQALLVAKENAKLNQVSVTFE--RSDLFDNVTGTYDVIVSNPPYIRTGEVV 192 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 L EV++F+P +LDG DGL YR I +L G EIGY+Q V + + Sbjct: 193 KLMPEVQEFEPMEALDGKEDGLYFYRKIIKECKAYLKPGGHILFEIGYDQGEAVSGLLKE 252 Query: 242 RKLFLVNAFKDYGGNDRVL 260 V KD NDRV+ Sbjct: 253 AGFKNVTVIKDLAHNDRVV 271 >gi|332716893|ref|YP_004444359.1| protoporphyrinogen oxidase protein [Agrobacterium sp. H13-3] gi|325063578|gb|ADY67268.1| protoporphyrinogen oxidase protein [Agrobacterium sp. H13-3] Length = 289 Score = 310 bits (795), Expect = 1e-82, Method: Composition-based stats. Identities = 129/263 (49%), Positives = 167/263 (63%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 L D+ + VTG S ++ PD + + + + R E +HRILG R+F+ Sbjct: 27 DPLLDARLLVADVTGFSLTDFVMKPDHPVTREESARIAAMVERRAGGEPVHRILGHREFH 86 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 + L LS++T EPRP+TE+LVD+ L + + RILDLGTGTGA+CLALLKE P Sbjct: 87 GLDLLLSTETLEPRPDTEVLVDTLLPALKKIVADKGSARILDLGTGTGAICLALLKECPE 146 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181 GVG DIS ALE A NA NG++ RF+T++SDWF + G FD+IVSNPPYI S IV Sbjct: 147 ATGVGSDISADALETAAKNAARNGLASRFETMRSDWFKKISGRFDIIVSNPPYIRSDIVT 206 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 L EVR DP +LDGG DGL+ YR IA R L ++G+ VEIG++Q++DV IF S Sbjct: 207 TLDREVRHHDPMAALDGGQDGLAPYRLIAADAGRFLVENGIVGVEIGFDQRLDVSAIFAS 266 Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264 L++A KDYGGNDRVL F R Sbjct: 267 HGFSLLDAVKDYGGNDRVLTFRR 289 >gi|15890802|ref|NP_356474.1| protoporphyrinogen oxidase [Agrobacterium tumefaciens str. C58] gi|15159087|gb|AAK89259.1| protoporphyrinogen oxidase [Agrobacterium tumefaciens str. C58] Length = 289 Score = 310 bits (795), Expect = 1e-82, Method: Composition-based stats. Identities = 125/263 (47%), Positives = 166/263 (63%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 L D+ + VTG S ++ P+ + + + I R + E +HRILG R+F+ Sbjct: 27 DPLVDARLLIADVTGFSLTDFVMKPEHPVTQDESARIAAMIERRAEGEPVHRILGHREFH 86 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 + L LS +T EPRP+TE+LVD+ L + ++ RILDLGTGTGA+CLALLKE Sbjct: 87 GLDLLLSKETLEPRPDTEVLVDTLLPALKEAVSRKGSARILDLGTGTGAICLALLKECAQ 146 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181 G+G DIS ALE A NA NG+ RF+T++S+WF + G FD+IVSNPPYI + IV Sbjct: 147 ASGIGSDISADALETAAKNAARNGLDSRFETIRSNWFEKISGRFDIIVSNPPYIRTDIVA 206 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 L EVR+ DP +LDGG DGL+ YR IA R L ++G VEIG++Q++DV IF S Sbjct: 207 TLDPEVRNHDPMAALDGGQDGLAPYRLIAADAGRFLVENGTVGVEIGFDQRLDVSAIFAS 266 Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264 L++A KDYGGNDRVL F R Sbjct: 267 HGFSLLDAVKDYGGNDRVLTFRR 289 >gi|291532655|emb|CBL05768.1| [protein release factor]-glutamine N5-methyltransferase [Megamonas hypermegale ART12/1] Length = 293 Score = 308 bits (791), Expect = 3e-82, Method: Composition-based stats. Identities = 87/263 (33%), Positives = 134/263 (50%), Gaps = 1/263 (0%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A D+ L V G + V D ++ ++ + + +H + ILG R+F Sbjct: 29 ARLDAEVLLSHVLGQKRIYLYVHFDEPMEAKELAKFREYVAKRARHIPVAYILGQREFMG 88 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + ++ DT PRP+TE+LV++ +A + I+D+GTG+GA+ L+LLK P Sbjct: 89 LDFKVTKDTLIPRPDTEILVENTIAKVNENFGDKQSYDIVDIGTGSGAIILSLLKNLPKA 148 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181 KG VDIS + +AK NA V +R + D F V+ FDVIVSNPPYI + Sbjct: 149 KGFTVDISANVVAVAKENAQNLQVDDRCEFFVGDLFEPVKDKVFDVIVSNPPYIPQKDIA 208 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 L ++V+D++P +L DGLS Y+ + ++L G +VEIG Q V ++ Sbjct: 209 TLEIDVKDYEPLSALTDNKDGLSFYQRLFTQGMKYLKNGGFMAVEIGIYQAEPVKQMAID 268 Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264 + KDY G DRV+L + Sbjct: 269 NGWQNIEIIKDYAGIDRVVLAWK 291 >gi|28897518|ref|NP_797123.1| HemK protein [Vibrio parahaemolyticus RIMD 2210633] gi|260364111|ref|ZP_05776831.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Vibrio parahaemolyticus K5030] gi|260879266|ref|ZP_05891621.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Vibrio parahaemolyticus AN-5034] gi|260897558|ref|ZP_05906054.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Vibrio parahaemolyticus Peru-466] gi|260903528|ref|ZP_05911923.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Vibrio parahaemolyticus AQ4037] gi|28805730|dbj|BAC59007.1| HemK protein [Vibrio parahaemolyticus RIMD 2210633] gi|308086348|gb|EFO36043.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Vibrio parahaemolyticus Peru-466] gi|308089666|gb|EFO39361.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Vibrio parahaemolyticus AN-5034] gi|308110852|gb|EFO48392.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Vibrio parahaemolyticus AQ4037] gi|308114222|gb|EFO51762.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Vibrio parahaemolyticus K5030] Length = 285 Score = 308 bits (791), Expect = 4e-82, Method: Composition-based stats. Identities = 91/261 (34%), Positives = 132/261 (50%), Gaps = 9/261 (3%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 D+ LC V G ++ P+ L+ Q+ + R L E + I+G R+F+++ Sbjct: 28 LDAAVLLCHVLGKPRTYLLTWPEKALEPEQQAQFNALLARRLAGEPVAYIIGEREFWSLP 87 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L +S T PRP+TE LV+ AL + ILDLGTGTGA+ LAL E P + Sbjct: 88 LKVSPTTLIPRPDTERLVEVALDKTY-----GQTGSILDLGTGTGAIALALASELPNRQV 142 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDC 182 +GVD+ +A E+A+ NA + Q WF + F +IVSNPPY++ Sbjct: 143 MGVDLKQEAKELAEYNAAQLNIK-NVTFDQGSWFEPIAEGTKFALIVSNPPYVDEKDPHL 201 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 +VR F+P+ +L +GL+ R I+D ++L + G + E GY+Q V I Sbjct: 202 SQGDVR-FEPKSALVADENGLADIRHISDLARQYLEEGGWLAFEHGYDQGEAVREIMRGF 260 Query: 243 KLFLVNAFKDYGGNDRVLLFC 263 V KDYGGNDRV L C Sbjct: 261 GYQQVVTEKDYGGNDRVTLGC 281 >gi|291520819|emb|CBK79112.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Coprococcus catus GD/7] Length = 289 Score = 308 bits (789), Expect = 6e-82, Method: Composition-based stats. Identities = 89/266 (33%), Positives = 140/266 (52%), Gaps = 10/266 (3%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFF---LTNAIVRSLKHESIHRILGWR 58 A D+ L + G+S ++ + D+ Q I R + + ++G Sbjct: 24 NASVDAWYLLEHIYGISRVDFLIRRNDPFDEAQMKQSADYQALIRRRSEGYPVQYLMGST 83 Query: 59 DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118 +F + ++ PR +TE+LV++ALA P R+LD+ TG+G + L+L K Sbjct: 84 EFMGLPFFVNESVLIPRQDTEVLVETALAMMKPEC------RLLDMCTGSGCILLSLAKL 137 Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESV 178 +GVGVDIS AL++A+ N G+S + + SD F SVEG+FD+IVSNPPYI + Sbjct: 138 GTVAEGVGVDISEGALKVAERNRENLGLS-QVKLVHSDLFGSVEGVFDMIVSNPPYIPTN 196 Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238 ++ L EV+D +P ++LDG DGL YR +A+ R+L G EIGY+Q V ++ Sbjct: 197 DIEDLMREVKDHEPHLALDGSRDGLLFYRKLAEESGRYLVPGGSLLFEIGYDQGKAVSQL 256 Query: 239 FESRKLFLVNAFKDYGGNDRVLLFCR 264 + ++ KD G DRV+ + Sbjct: 257 LDQAGFKDIHVKKDLAGLDRVVYAVK 282 >gi|158321601|ref|YP_001514108.1| HemK family modification methylase [Alkaliphilus oremlandii OhILAs] gi|158141800|gb|ABW20112.1| modification methylase, HemK family [Alkaliphilus oremlandii OhILAs] Length = 289 Score = 308 bits (789), Expect = 6e-82, Method: Composition-based stats. Identities = 83/267 (31%), Positives = 129/267 (48%), Gaps = 6/267 (2%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 D+ L V + + + P+ + + + + H + I+ ++F Sbjct: 23 PRLDAEVLLYNVLKVDRLHLHMYPEKEISKEEEALFWTYMAQRKNHMPVQYIIKKQEFMG 82 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + + PR +TE+LV+ A+ + E + VRI+D+GTG+GA+ ++L K Sbjct: 83 LDFFVEEGVLIPRGDTEILVEKAIEIYKEKFEPQK-VRIMDIGTGSGAIVVSLAKFIENS 141 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-----FDVIVSNPPYIES 177 +DIS KA E+AK NA +GV + F ++ G +D IVSNPPYI Sbjct: 142 ILTAIDISPKAFEVAKKNAAHHGVDHKIAFYLGSLFEALYGKDEHKEYDFIVSNPPYIPK 201 Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237 +VD L V+D++P ++LDGG DGL YR I G +L G EIGY+Q V Sbjct: 202 AVVDTLDAGVKDYEPHLALDGGADGLDFYREITLGAKEYLKSGGWLLFEIGYDQGESVSE 261 Query: 238 IFESRKLFLVNAFKDYGGNDRVLLFCR 264 + + L V KD G DRV+L + Sbjct: 262 LLIANDLKEVQVRKDLAGLDRVVLGKK 288 >gi|220930733|ref|YP_002507642.1| modification methylase, HemK family [Clostridium cellulolyticum H10] gi|220001061|gb|ACL77662.1| modification methylase, HemK family [Clostridium cellulolyticum H10] Length = 285 Score = 308 bits (789), Expect = 7e-82, Method: Composition-based stats. Identities = 89/266 (33%), Positives = 146/266 (54%), Gaps = 5/266 (1%) Query: 1 MQA-LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRD 59 ++A + ++ LC+V + D L ++ L + +V+ + + I+G + Sbjct: 19 IEAPVHEAGVMLCKVLKCGRTYLYSHGDRELSIDEKAVLDHMLVQRTGNIPLQYIVGDTE 78 Query: 60 FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119 F ++R ++ PR +TELLV+ + L + + ++LD+ TG+G + +++ Sbjct: 79 FMSLRFLVTPAVLIPRQDTELLVEKTID-LLNQGKTGTNKKVLDMCTGSGCIAVSIAYFC 137 Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIES 177 P V D+S KAL++AK+N+ NGV R + D F +++G FD+IVSNPPYIE+ Sbjct: 138 PECSIVACDVSQKALDVAKANSELNGVQNRVELCCGDLFDAIKGGQKFDIIVSNPPYIET 197 Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237 I+ L EVR ++P ++LDGG DGL YR I LN++G + EIGYNQ V Sbjct: 198 DIIAGLQKEVRSYEPGLALDGGADGLVFYRRIISSAPERLNRNGWLAFEIGYNQGEKVSA 257 Query: 238 IFESRKLFLVNAFKDYGGNDRVLLFC 263 + + + FKDYGGNDRV++ Sbjct: 258 LMKES-FVDIQIFKDYGGNDRVVIGQ 282 >gi|328473484|gb|EGF44332.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Vibrio parahaemolyticus 10329] Length = 285 Score = 307 bits (788), Expect = 8e-82, Method: Composition-based stats. Identities = 92/261 (35%), Positives = 132/261 (50%), Gaps = 9/261 (3%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 D+ LC V G ++ P+ L+ Q+ + R L E + I+G R+F+++ Sbjct: 28 LDAAVLLCHVLGKPRTYLLTWPEKALEPEQQAQFDALLARRLAGEPVAYIIGEREFWSLP 87 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L +S T PRP+TE LV+ AL + ILDLGTGTGA+ LAL E P + Sbjct: 88 LKVSPTTLIPRPDTERLVEVALDKTY-----GQTGSILDLGTGTGAIALALASELPSRQV 142 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDC 182 +GVD+ +A E+A+ NA + Q WF + F +IVSNPPYI+ Sbjct: 143 MGVDLKQEAKELAEYNAAQLNIK-NVTFDQGSWFEPIAEGTKFALIVSNPPYIDEKDPHL 201 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 +VR F+P+ +L +GL+ R I+D ++L + G + E GY+Q V I Sbjct: 202 SQGDVR-FEPKSALVADENGLADIRHISDLARQYLEEGGWLAFEHGYDQGEAVREIMSGF 260 Query: 243 KLFLVNAFKDYGGNDRVLLFC 263 V KDYGGNDRV L C Sbjct: 261 GYQQVVTEKDYGGNDRVTLGC 281 >gi|163867490|ref|YP_001608689.1| methylase [Bartonella tribocorum CIP 105476] gi|161017136|emb|CAK00694.1| Methylase [Bartonella tribocorum CIP 105476] Length = 288 Score = 307 bits (787), Expect = 1e-81, Method: Composition-based stats. Identities = 104/263 (39%), Positives = 147/263 (55%) Query: 1 MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60 ++A D+ + +TG+++ I PD L + AI R + E ++RI+G R+F Sbjct: 23 LEADLDAKVLVEWITGINAATRISKPDMHLSSEHIRQIEQAIKRRIAGEPVYRIIGAREF 82 Query: 61 YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120 Y + LS +T EPRP+TE L+D L F +++ LD+GTG+GA+ +A+LK+ P Sbjct: 83 YGISFALSQETLEPRPDTETLIDLVLPFLKKQVKNSKKTTFLDMGTGSGAIAIAILKQIP 142 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180 V VDIS AL+ A NA V RF L SDWF SV FD IVSNPPYI + Sbjct: 143 QSYAVAVDISEDALKTATKNAKNADVIHRFTPLLSDWFDSVTDRFDFIVSNPPYIPEKDI 202 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 + L EVR DP +L GG DGL YR +A + +L ++G +VEIGY+Q+ +V +F+ Sbjct: 203 NKLAKEVRLHDPLRALIGGKDGLDFYRKLAHEAANYLKENGTIAVEIGYSQEKEVCDLFK 262 Query: 241 SRKLFLVNAFKDYGGNDRVLLFC 263 + KD G R LLF Sbjct: 263 KNGFQCLEMRKDLNGIPRALLFA 285 >gi|153814376|ref|ZP_01967044.1| hypothetical protein RUMTOR_00586 [Ruminococcus torques ATCC 27756] gi|317500090|ref|ZP_07958325.1| hypothetical protein HMPREF1026_00267 [Lachnospiraceae bacterium 8_1_57FAA] gi|331087686|ref|ZP_08336612.1| protein-(glutamine-N5) methyltransferase [Lachnospiraceae bacterium 3_1_46FAA] gi|145848772|gb|EDK25690.1| hypothetical protein RUMTOR_00586 [Ruminococcus torques ATCC 27756] gi|316898575|gb|EFV20611.1| hypothetical protein HMPREF1026_00267 [Lachnospiraceae bacterium 8_1_57FAA] gi|330409667|gb|EGG89103.1| protein-(glutamine-N5) methyltransferase [Lachnospiraceae bacterium 3_1_46FAA] Length = 287 Score = 306 bits (785), Expect = 2e-81, Method: Composition-based stats. Identities = 87/264 (32%), Positives = 133/264 (50%), Gaps = 7/264 (2%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 ++ D+ L VT +S P+ L + ++ I R + + I G ++F Sbjct: 21 ESKIDAWYLLEYVTKISRAVFYAYPEKELTEEEKIQYEECIKRRAERIPLQHITGVQEFM 80 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP- 120 + ++ PR +TE+LV+ AL + +++VRILDL TG+G + L++L Sbjct: 81 GLPFLVNEHVLIPRQDTEVLVEQALCLLEKEKKHKEIVRILDLCTGSGCILLSMLHYVRR 140 Query: 121 ----FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE 176 GVG DIS +AL +A NA G+ +F +Q D F +VEG FD+I+SNPPYI Sbjct: 141 KRKIDIYGVGSDISKEALAVAVENAKKLGIEAKF--VQGDLFENVEGSFDMILSNPPYIR 198 Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236 + ++ L EVR DP +LDG DGL YR I ++L + G EIG +Q V Sbjct: 199 TSEIERLQEEVRFHDPIKALDGKEDGLYFYRIIVKESRQYLKRGGWLIFEIGSDQAEAVK 258 Query: 237 RIFESRKLFLVNAFKDYGGNDRVL 260 + + + KD G DRV+ Sbjct: 259 TLLQEAGYENIEVKKDLAGLDRVV 282 >gi|154502574|ref|ZP_02039634.1| hypothetical protein RUMGNA_00387 [Ruminococcus gnavus ATCC 29149] gi|153796766|gb|EDN79186.1| hypothetical protein RUMGNA_00387 [Ruminococcus gnavus ATCC 29149] Length = 283 Score = 306 bits (785), Expect = 2e-81, Method: Composition-based stats. Identities = 85/260 (32%), Positives = 137/260 (52%), Gaps = 6/260 (2%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 D+ L VTG++ ++P+ + D++ I + + + G ++F + Sbjct: 24 LDAWYLLEHVTGITKASYYMEPEHPMHDQEEREYLELIRKRSTRIPLQHLTGVQEFMGLE 83 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 ++ PR +TE+LV++AL E+ +R+LD+ TG+G + L+LL E Sbjct: 84 FLVNEHVLIPRQDTEVLVETALDVCKQ--EQMGEIRLLDMCTGSGCILLSLLHELKPRTV 141 Query: 125 VGV--DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182 GV D+S +AL +A+ NA + + L+SD F +V+G +DV+VSNPPYI + +++ Sbjct: 142 TGVGVDLSKEALCVAEKNAEKLKIDA--EFLESDLFENVKGTYDVVVSNPPYIRTSVIET 199 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 L EV+D DP ++LDG DGL YR I + +L K G EIG +Q DV + E Sbjct: 200 LQEEVKDHDPYLALDGKEDGLYFYRRIIEQAPAYLKKKGWLLFEIGSDQGEDVKNLMEQA 259 Query: 243 KLFLVNAFKDYGGNDRVLLF 262 V+ KD G DRV+ Sbjct: 260 GYTGVSVKKDLAGLDRVVFG 279 >gi|91228928|ref|ZP_01262826.1| HemK protein [Vibrio alginolyticus 12G01] gi|91187511|gb|EAS73845.1| HemK protein [Vibrio alginolyticus 12G01] Length = 284 Score = 306 bits (785), Expect = 2e-81, Method: Composition-based stats. Identities = 88/261 (33%), Positives = 130/261 (49%), Gaps = 9/261 (3%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 D+ LC V G ++ P+ L+ Q+ + R L E + I+G R+F+++ Sbjct: 28 LDAAVLLCHVLGKPRTYLLTWPEKALEAEQKSQFDALLERRLTGEPVAYIIGEREFWSLP 87 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 +S T PRP+TE LV+ AL + + +LDLGTGTGA+ +AL E P + Sbjct: 88 FKVSPSTLIPRPDTERLVEVALDKTYEQTGP-----VLDLGTGTGAIAIALASEMPKRQV 142 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDC 182 +GVD+ +A +A+ NA + Q WF + F +IVSNPPYI+ Sbjct: 143 MGVDLKQEAKALAEYNAEQLNIK-NVTFAQGSWFEPITEGTKFALIVSNPPYIDEKDPHL 201 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 +VR F+P+ +L +GL+ R I+D ++L G + E GY+Q V I Sbjct: 202 SQGDVR-FEPKSALVAKENGLADIRHISDLARQYLEVGGWLAFEHGYDQGEAVREIMRGF 260 Query: 243 KLFLVNAFKDYGGNDRVLLFC 263 V KDYGGNDRV L C Sbjct: 261 GYQQVATEKDYGGNDRVTLGC 281 >gi|116254018|ref|YP_769856.1| protein methyltransferase [Rhizobium leguminosarum bv. viciae 3841] gi|115258666|emb|CAK09770.1| putative protein methyltransferase [Rhizobium leguminosarum bv. viciae 3841] Length = 286 Score = 306 bits (785), Expect = 2e-81, Method: Composition-based stats. Identities = 118/263 (44%), Positives = 166/263 (63%) Query: 1 MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60 + D+ + + LS ++++ L Q + A+ R L HE +HRILG R+F Sbjct: 22 VDPATDARLLVAGLLKLSPTELLMRSAERLSPEQAKVIFKALERRLGHEPVHRILGEREF 81 Query: 61 YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120 Y + L LS++T EPRP+TE+LVD+ L + + ++ + ILD+GTGTGA+CLALL E P Sbjct: 82 YGLPLRLSAETLEPRPDTEILVDTVLVYLKDLAKVQNRLHILDMGTGTGAICLALLSECP 141 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180 GVG DIS AL A+SNA NG+ +RF+ +QS+WF ++G F IVSNPPYI S ++ Sbjct: 142 DASGVGSDISADALLTARSNAERNGLQDRFEAVQSNWFEDIQGSFHAIVSNPPYIASNVI 201 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 L EV FDP +LDGG DGL Y+ IA +R + DG+ +EIGY+Q+ DV IFE Sbjct: 202 HDLAPEVTKFDPAAALDGGPDGLDAYKAIAKDAARFIRPDGVVGLEIGYDQRNDVTAIFE 261 Query: 241 SRKLFLVNAFKDYGGNDRVLLFC 263 ++ + + KDYG NDRVL+F Sbjct: 262 AKGFRCLKSVKDYGQNDRVLVFA 284 >gi|269965454|ref|ZP_06179573.1| HemK protein [Vibrio alginolyticus 40B] gi|269829933|gb|EEZ84163.1| HemK protein [Vibrio alginolyticus 40B] Length = 284 Score = 305 bits (783), Expect = 3e-81, Method: Composition-based stats. Identities = 89/261 (34%), Positives = 130/261 (49%), Gaps = 9/261 (3%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 D+ LC V G ++ P+ L+ Q+ + R L E + I+G R+F+++ Sbjct: 28 LDAAVLLCHVLGKPRTYLLTWPEKALEAEQQAKFDALLERRLTGEPVAYIIGEREFWSLP 87 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 +S T PRP+TE LV+ AL + + ILDLGTGTGA+ +AL E P + Sbjct: 88 FKVSPSTLIPRPDTERLVEVALDKTYEQTGP-----ILDLGTGTGAIAIALASEMPKRQV 142 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDC 182 +GVD+ +A +A+ NA + Q WF + F +IVSNPPYI+ Sbjct: 143 MGVDLKQEAKALAEYNAEQLNIK-NVTFAQGSWFEPITEGTKFALIVSNPPYIDEKDPHL 201 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 +VR F+P+ +L +GL+ R I+D ++L G + E GY+Q V I Sbjct: 202 SQGDVR-FEPKSALVAKENGLADIRHISDLARQYLEVGGWLAFEHGYDQGEAVREIMRGF 260 Query: 243 KLFLVNAFKDYGGNDRVLLFC 263 V KDYGGNDRV L C Sbjct: 261 GYQQVATEKDYGGNDRVTLGC 281 >gi|254230551|ref|ZP_04923919.1| protein methyltransferase HemK (Protein-glutamine N-methyltransferase hemK) (Protein-(glutamine-N5) MTase hemK) [Vibrio sp. Ex25] gi|262394971|ref|YP_003286825.1| Polypeptide chain release factor methylase [Vibrio sp. Ex25] gi|151936923|gb|EDN55813.1| protein methyltransferase HemK (Protein-glutamine N-methyltransferase hemK) (Protein-(glutamine-N5) MTase hemK) [Vibrio sp. Ex25] gi|262338565|gb|ACY52360.1| Polypeptide chain release factor methylase [Vibrio sp. Ex25] Length = 284 Score = 305 bits (782), Expect = 4e-81, Method: Composition-based stats. Identities = 89/261 (34%), Positives = 130/261 (49%), Gaps = 9/261 (3%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 D+ LC V G ++ P+ L+ Q+ + R L E + I+G R+F+++ Sbjct: 28 LDAAVLLCHVLGKPRTYLLTWPEKALEAEQQAKFNALLERRLAGEPVAYIIGEREFWSLP 87 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 +S T PRP+TE LV+ AL + + ILDLGTGTGA+ +AL E P + Sbjct: 88 FKVSPSTLIPRPDTERLVEVALDKTYEQTGP-----ILDLGTGTGAIAIALASEMPTRQV 142 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDC 182 +GVD+ +A +A+ NA + Q WF + F +IVSNPPYI+ Sbjct: 143 MGVDLKQEAKALAEYNAEQLNIK-NVTFAQGSWFEPITEGTKFALIVSNPPYIDEKDPHL 201 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 +VR F+P+ +L +GL+ R I+D ++L G + E GY+Q V I Sbjct: 202 SQGDVR-FEPKSALVAKENGLADIRHISDLARQYLEVGGWLAFEHGYDQGDAVREIMRGF 260 Query: 243 KLFLVNAFKDYGGNDRVLLFC 263 V KDYGGNDRV L C Sbjct: 261 GYQQVATEKDYGGNDRVTLGC 281 >gi|240849862|ref|YP_002971250.1| protoporphyrinogen oxidase protein [Bartonella grahamii as4aup] gi|240266985|gb|ACS50573.1| protoporphyrinogen oxidase protein [Bartonella grahamii as4aup] Length = 288 Score = 305 bits (782), Expect = 4e-81, Method: Composition-based stats. Identities = 105/262 (40%), Positives = 150/262 (57%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 +A D+ + +TG+++ + I PD L + A+ R + E ++RI+G R+FY Sbjct: 24 EADLDAKILVEWITGINAAERISKPDMHLSSEHIIQIEQALQRRIAGEPVYRIIGAREFY 83 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 + TLS +T EPRP+TE L+D L F ++E LD+GTG+GA+ + LLK+ P Sbjct: 84 GISFTLSQETLEPRPDTETLIDLVLPFLQKQVENSGRTTFLDMGTGSGAIAITLLKQIPQ 143 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181 V VDIS AL+ AK NA V+ RF L SDWF +V FD IVSNPPYI + + Sbjct: 144 SYAVAVDISEDALKTAKKNAKNAEVAHRFTPLLSDWFDAVADRFDFIVSNPPYIPAQDIK 203 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 L EVR +DP +L GG DGL YR +A + +L ++G +VEIGY+Q+ +V +F+ Sbjct: 204 KLAKEVRLYDPLRALMGGEDGLYFYRKLAHEAANYLKENGYVAVEIGYSQENEVCNLFKK 263 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 + KD G R LLF Sbjct: 264 NGFQCLEVRKDLSGIPRALLFA 285 >gi|86359339|ref|YP_471231.1| protoporphyrinogen oxidase (methyltransferase) protein [Rhizobium etli CFN 42] gi|86283441|gb|ABC92504.1| protoporphyrinogen oxidase (methyltransferase) protein [Rhizobium etli CFN 42] Length = 286 Score = 305 bits (782), Expect = 4e-81, Method: Composition-based stats. Identities = 118/263 (44%), Positives = 162/263 (61%) Query: 1 MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60 + + D+ + + LSS +++ L Q + A+ R L HE +HRILG R+F Sbjct: 22 VDPVTDARLLVAGLLKLSSTELLTRSAEKLSPEQIEVIFKAVERRLGHEPVHRILGEREF 81 Query: 61 YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120 Y + L LSS T EPRP+TE+LVD+ L + + + + ILD+GTG+GA+CLALL E P Sbjct: 82 YGLPLGLSSGTLEPRPDTEILVDTVLPYLKDLAKAQRHLHILDIGTGSGAICLALLSECP 141 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180 G+G DIS AL AKSNA NG+ +RF +QS WF +++G F IVSNPPYI S ++ Sbjct: 142 AASGIGSDISADALRTAKSNAERNGLQDRFQAVQSKWFENIQGSFHAIVSNPPYIASNVI 201 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 L EV FDP +LDGG DGL Y+ IA R + DG+ +EIGY+Q+ DV IFE Sbjct: 202 HDLAPEVTKFDPVAALDGGPDGLDAYKAIAKDAVRFMRPDGILGLEIGYDQRNDVTAIFE 261 Query: 241 SRKLFLVNAFKDYGGNDRVLLFC 263 ++ + + KDYG NDR L+F Sbjct: 262 AKGFRCLKSVKDYGQNDRALVFA 284 >gi|269961570|ref|ZP_06175932.1| conserved hypothetical protein [Vibrio harveyi 1DA3] gi|269833611|gb|EEZ87708.1| conserved hypothetical protein [Vibrio harveyi 1DA3] Length = 285 Score = 305 bits (781), Expect = 5e-81, Method: Composition-based stats. Identities = 89/261 (34%), Positives = 132/261 (50%), Gaps = 9/261 (3%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 D+ LC V G ++ P+ L+ Q+ + R + E + I+G R+F+++ Sbjct: 28 LDAAVLLCHVLGKPRTYLLTWPERALETEQQAQFDALLERRIAGEPVAYIIGEREFWSLP 87 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L +S T PRP+TE LV+ AL + + ILDLGTGTGA+ LAL E P + Sbjct: 88 LKVSPSTLIPRPDTERLVEVALDKTFGQTGP-----ILDLGTGTGAIALALASEMPNRQV 142 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIESVIVDC 182 +G+D+ +A E+A+ NA + Q WF + F +IVSNPPYI+ Sbjct: 143 MGIDLKQEAKELAEHNASQLNIK-NVTFDQGSWFEPIASGTKFALIVSNPPYIDEKDPHL 201 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 +VR F+P+ +L +GL+ R I+D ++L + G + E GY+Q V I Sbjct: 202 SQGDVR-FEPKSALVADENGLADIRHISDLARQYLQEGGWLAFEHGYDQGEAVREIMTHF 260 Query: 243 KLFLVNAFKDYGGNDRVLLFC 263 V KDYG NDRV L C Sbjct: 261 GFEQVVTEKDYGDNDRVTLGC 281 >gi|319408171|emb|CBI81824.1| Methylase [Bartonella schoenbuchensis R1] Length = 288 Score = 304 bits (780), Expect = 6e-81, Method: Composition-based stats. Identities = 112/261 (42%), Positives = 149/261 (57%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 +A D+ + VTG + I+ P+ L +Q L AI R + E HRI+G RDFY Sbjct: 24 EANLDAKLLVEWVTGTTPTDRILQPNMRLSSKQIAQLKKAIQRRIAGEPTHRIIGKRDFY 83 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 + LTLS DT EPRP+TE LVD L ++EK LD+GTG+GA+ +A+LK+ Sbjct: 84 GISLTLSQDTLEPRPDTETLVDLVLPILKKQVEKTGKATFLDMGTGSGAIAIAILKQIIQ 143 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181 + VDIS AL+ A NA +++RF L SDWF+SV G FD+IVSNPPYI V Sbjct: 144 TYAIAVDISEDALKTATKNAKHADIAQRFTPLLSDWFTSVTGQFDLIVSNPPYIPEKDVQ 203 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 L EVR DP +L GG DGL YR +A + HL + +VEIGY+Q+ +V +F+ Sbjct: 204 NLAKEVRLHDPLRALVGGKDGLDFYRKLAHESANHLKEKAYVAVEIGYSQQKEVCDLFKK 263 Query: 242 RKLFLVNAFKDYGGNDRVLLF 262 + KD G R LLF Sbjct: 264 NGFEYLKMRKDLNGIPRALLF 284 >gi|241206501|ref|YP_002977597.1| modification methylase, HemK family [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240860391|gb|ACS58058.1| modification methylase, HemK family [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 286 Score = 304 bits (780), Expect = 8e-81, Method: Composition-based stats. Identities = 117/263 (44%), Positives = 163/263 (61%) Query: 1 MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60 + D+ + + LS +++ L Q + A+ R L HE +HRILG R+F Sbjct: 22 VDPATDARLLVAGLLKLSPTELLTRSAERLSAEQAEAIFRALERRLGHEPVHRILGEREF 81 Query: 61 YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120 Y + L LS++T EPRP+TE+LVD+ L + + + + ILD+GTGTGA+CLALL + P Sbjct: 82 YGLPLRLSAETLEPRPDTEILVDTVLVYLKDLAKVQSRLHILDMGTGTGAICLALLSDCP 141 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180 GVG DIS AL A+SNA NG+ +RF +QS WF +++G F IVSNPPYI S ++ Sbjct: 142 DASGVGSDISADALLTARSNAERNGLQDRFQVVQSSWFENIQGSFHAIVSNPPYIASNVI 201 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 L EV FDP +LDGG DGL Y+ IA +R + DG+ +EIGY+Q+ DV IFE Sbjct: 202 HDLAPEVTKFDPAAALDGGPDGLDAYKAIAKDAARFIRPDGVVGLEIGYDQRNDVTAIFE 261 Query: 241 SRKLFLVNAFKDYGGNDRVLLFC 263 ++ + + KDYG NDRVL+F Sbjct: 262 AKGFRCLKSVKDYGQNDRVLVFA 284 >gi|332140930|ref|YP_004426668.1| peptide release factor-glutamine N5-methyltransferase(HemK) [Alteromonas macleodii str. 'Deep ecotype'] gi|327550952|gb|AEA97670.1| peptide release factor-glutamine N5-methyltransferase(HemK) [Alteromonas macleodii str. 'Deep ecotype'] Length = 285 Score = 304 bits (779), Expect = 8e-81, Method: Composition-based stats. Identities = 97/263 (36%), Positives = 138/263 (52%), Gaps = 7/263 (2%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L + G S + PD L Q +AI R E + I+G RDF+ + L Sbjct: 23 DAKVMLADILGKSQTYLFTWPDKTLTPSQIAEFEDAIERRKAGEPVAYIIGKRDFWTLSL 82 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRI----EKRDVVRILDLGTGTGAVCLALLKESPF 121 SS T PRP+TE+LV+ + ++ + + + I DLGTGTGA+ LAL E P Sbjct: 83 FTSSHTLIPRPDTEVLVEHVINWATGNVSANTPNKPPLSICDLGTGTGAIALALASELPQ 142 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIV 180 +GVD A+ +AK NA +N + +QSDWFS++ G FD+IVSNPPYI+ Sbjct: 143 ASVIGVDFLSDAVALAKRNANSNKI-NNARFMQSDWFSALRGHTFDIIVSNPPYIDETSP 201 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 +VR F+P+ +L G GLS + I S +LN +GL + E G++Q V + + Sbjct: 202 YLNEGDVR-FEPKSALTSGDSGLSDIKHIISHASTYLNSNGLLAFEHGFDQGDAVKALLQ 260 Query: 241 SRKLFLVNAFKDYGGNDRVLLFC 263 + V KDYG NDRV L Sbjct: 261 TSGFVNVKTIKDYGNNDRVTLGQ 283 >gi|167855821|ref|ZP_02478573.1| HemK-like protein [Haemophilus parasuis 29755] gi|167853034|gb|EDS24296.1| HemK-like protein [Haemophilus parasuis 29755] Length = 416 Score = 302 bits (775), Expect = 3e-80, Method: Composition-based stats. Identities = 92/264 (34%), Positives = 145/264 (54%), Gaps = 4/264 (1%) Query: 1 MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60 + A D++ L VT S + ++ L++ + L + R K E + ILG ++F Sbjct: 151 LNAKADANILLQAVTKRSKSAIFAFAETELNESELRQLAELLARRAKGEPMAYILGEKEF 210 Query: 61 YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120 +++ L +S+ T PRP+TE LV+ AL ++ R++ ++ILDLGTGTGA+ LAL E Sbjct: 211 WSLPLAVSTATLIPRPDTERLVEVALEWAYKRLDSSKNLQILDLGTGTGAIALALASELG 270 Query: 121 -FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESV 178 + +G+D A+++A+ N G E LQSDWF +++ FD+IVSNPPYI+ Sbjct: 271 TKAEIIGIDKQPDAVQLAEKNRQKLGF-ENVRFLQSDWFEALKNQRFDLIVSNPPYIDKD 329 Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238 + +VR F+P +L +GLS + I +L +G +E G+ Q V I Sbjct: 330 DENLTQGDVR-FEPLTALVAEQNGLSDLQKIIQNAPLYLTPNGALMLEHGWQQAASVQDI 388 Query: 239 FESRKLFLVNAFKDYGGNDRVLLF 262 F+ + V F+DYGGNDRV + Sbjct: 389 FQQNQWNAVTTFQDYGGNDRVTVA 412 >gi|210608517|ref|ZP_03287893.1| hypothetical protein CLONEX_00072 [Clostridium nexile DSM 1787] gi|210153008|gb|EEA84014.1| hypothetical protein CLONEX_00072 [Clostridium nexile DSM 1787] Length = 287 Score = 302 bits (774), Expect = 3e-80, Method: Composition-based stats. Identities = 86/257 (33%), Positives = 135/257 (52%), Gaps = 8/257 (3%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L VTGL + PD + D Q + + +H + I G ++F + Sbjct: 25 DAWYLLEFVTGLDRTAYFLKPDEKITDEQGSLYKAYLEQRAQHIPLQHITGVQEFMGLEF 84 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 ++ PR +TE LV+ L++ P++ ++LD+ TG+G + ++L+K +GV Sbjct: 85 AVNEHVLVPRQDTETLVECVLSYVQPQM------KVLDMCTGSGCILISLMKLGKIAQGV 138 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185 G DIS +AL+ AK NA + V ++SD F ++ +DVIVSNPPYI + +++ L Sbjct: 139 GADISDEALKTAKKNAEKHQVEPL--LIKSDLFENIVDKYDVIVSNPPYIRTAVIEELKE 196 Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245 EVR DP ++LDG DGL YR + + +L K G+ EIG++Q DV + E Sbjct: 197 EVRCHDPILALDGKEDGLYFYRKLIEQSPMYLKKGGMLYFEIGHDQGQDVKCLMEKAGFE 256 Query: 246 LVNAFKDYGGNDRVLLF 262 V KD G DRV+ Sbjct: 257 DVMVKKDLAGLDRVVFG 273 >gi|225874212|ref|YP_002755671.1| ribosomal protein L11 methyltransferase [Acidobacterium capsulatum ATCC 51196] gi|225794369|gb|ACO34459.1| ribosomal protein L11 methyltransferase [Acidobacterium capsulatum ATCC 51196] Length = 294 Score = 302 bits (773), Expect = 4e-80, Method: Composition-based stats. Identities = 89/263 (33%), Positives = 137/263 (52%), Gaps = 9/263 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A RD+ L V G + +IV D + Q + I+R E + I+G ++F+ Sbjct: 36 ARRDAELLLQHVLGRNRAWLIVHSDDAMTAEQVTQFESWILRRAAQEPVQYIVGEQEFWG 95 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 +RL ++ D PRPETE LV++AL R+ + + VR+ D+GTG+GA+ +AL P Sbjct: 96 LRLRVTPDVLIPRPETEHLVEAALE----RLPEGETVRVADIGTGSGAIAIALAASRPQA 151 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181 +D+S AL IA+ NA +GV+ER LQSD ++V G F +IVSNPPY+ Sbjct: 152 LVTALDLSEAALRIARENAAAHGVAERMRFLQSDLLAAVRGERFAMIVSNPPYVPGGE-- 209 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 L +VRDF+P +L G +GL YR + + L G +EIG+ Q+ + + Sbjct: 210 ELEPQVRDFEPHSALFAGAEGLDVYRRLIPEAAEVLEPGGWLLMEIGHGQRAALAELL-- 267 Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264 + D G RV++ + Sbjct: 268 AGWDDIAFVDDLQGIPRVVMARK 290 >gi|319899229|ref|YP_004159322.1| Methylase [Bartonella clarridgeiae 73] gi|319403193|emb|CBI76752.1| Methylase [Bartonella clarridgeiae 73] Length = 288 Score = 302 bits (773), Expect = 5e-80, Method: Composition-based stats. Identities = 103/261 (39%), Positives = 148/261 (56%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 +A ++ + +TG ++ I+ P+ L +Q L AI R + E ++RI+G R+FY Sbjct: 24 EADLNAKILVEWITGTNASDRILRPNMCLSSKQLVQLEQAINRRIAGEPVYRIIGTREFY 83 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 + LS DT EPRP+TE LVD + +EK + +LD+GTG+GA+ +A+LK+ P Sbjct: 84 GIPFALSKDTLEPRPDTETLVDLVVPILKTHLEKSEQATLLDMGTGSGAIAIAILKQIPQ 143 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181 V VDIS AL+ A NA V+ RF L S+WF S++G FD+I+SNPPYI + Sbjct: 144 TYAVAVDISEDALKTATKNAQHANVAHRFAPLLSNWFDSIKGQFDLIISNPPYIPEKEIK 203 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 L EVR DP +L GG DGL YR +A +L + G +VEI Y+Q+ V +FE Sbjct: 204 NLAKEVRQHDPLRALIGGKDGLDFYRKLAHESENYLKEKGHIAVEISYSQEKKVCDLFEK 263 Query: 242 RKLFLVNAFKDYGGNDRVLLF 262 + +D G R LLF Sbjct: 264 NGFKCLKIREDLNGIPRALLF 284 >gi|156973550|ref|YP_001444457.1| hypothetical protein VIBHAR_01251 [Vibrio harveyi ATCC BAA-1116] gi|156525144|gb|ABU70230.1| hypothetical protein VIBHAR_01251 [Vibrio harveyi ATCC BAA-1116] Length = 285 Score = 302 bits (773), Expect = 5e-80, Method: Composition-based stats. Identities = 90/261 (34%), Positives = 135/261 (51%), Gaps = 9/261 (3%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 D+ LC V G ++ P+ L+ Q+ + +VR + E + I+G R+F+++ Sbjct: 28 LDAAVLLCHVLGKPRTYLLTWPEKALEAEQQAQFDDLLVRRIAGEPVAYIIGEREFWSLP 87 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L +S T PRP+TE LV+ AL + + ILDLGTGTGA+ LAL E P + Sbjct: 88 LKVSPSTLIPRPDTERLVEVALDKTYEQTGP-----ILDLGTGTGAIALALASEMPKRQV 142 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVDC 182 +GVD+ +A E+A+ NA + Q WF + F +IVSNPPYI+ Sbjct: 143 MGVDLKQEAKELAEYNASQLNIK-NVTFDQGSWFEPIVSGTKFALIVSNPPYIDEQDPHL 201 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 +VR F+P+ +L +GL+ R I+D ++L + G + E GY+Q V I + Sbjct: 202 SQGDVR-FEPKSALVADENGLADIRHISDLARQYLEEGGWLAFEHGYDQGDAVREIMTNF 260 Query: 243 KLFLVNAFKDYGGNDRVLLFC 263 V DYGGN+RV L C Sbjct: 261 GYEQVVTENDYGGNERVTLGC 281 >gi|331090677|ref|ZP_08339526.1| protein-(glutamine-N5) methyltransferase [Lachnospiraceae bacterium 2_1_46FAA] gi|330400091|gb|EGG79742.1| protein-(glutamine-N5) methyltransferase [Lachnospiraceae bacterium 2_1_46FAA] Length = 274 Score = 301 bits (772), Expect = 5e-80, Method: Composition-based stats. Identities = 86/259 (33%), Positives = 134/259 (51%), Gaps = 8/259 (3%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 A D+ L +T +S +P + Q+ + K + + ++F Sbjct: 21 DASIDAWILLEYITKISRAMYYANPKREMTGEQKTQYKYFVEERAKRIPLQHLTKEQEFM 80 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 + ++ PR +TE+LV++ L + +R+LD+ TG+G + ++LLK Sbjct: 81 GLSFEVNEHVLIPRQDTEVLVETVLEDL------EENMRVLDICTGSGCILISLLKIMRG 134 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181 KGVGVDIS +ALE+A+ NA + + F +QSD F +VEG +DVIVSNPPYI++ ++ Sbjct: 135 VKGVGVDISEEALEVARRNAQKHDMEAVF--IQSDLFENVEGTYDVIVSNPPYIKTEEIE 192 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 L EV+ DP ++LDG DGL YR I ++L ++G EIG Q +V + E Sbjct: 193 KLEEEVKLHDPMLALDGKEDGLYFYRKIIKESRKYLKRNGKLYFEIGNTQGEEVKTLMEE 252 Query: 242 RKLFLVNAFKDYGGNDRVL 260 V KD G DRV+ Sbjct: 253 EGFTNVKIKKDLAGLDRVV 271 >gi|125974913|ref|YP_001038823.1| HemK family modification methylase [Clostridium thermocellum ATCC 27405] gi|256003830|ref|ZP_05428817.1| modification methylase, HemK family [Clostridium thermocellum DSM 2360] gi|281418621|ref|ZP_06249640.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Clostridium thermocellum JW20] gi|125715138|gb|ABN53630.1| modification methylase, HemK family [Clostridium thermocellum ATCC 27405] gi|255992168|gb|EEU02263.1| modification methylase, HemK family [Clostridium thermocellum DSM 2360] gi|281407705|gb|EFB37964.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Clostridium thermocellum JW20] gi|316939124|gb|ADU73158.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Clostridium thermocellum DSM 1313] Length = 302 Score = 301 bits (772), Expect = 6e-80, Method: Composition-based stats. Identities = 89/279 (31%), Positives = 140/279 (50%), Gaps = 20/279 (7%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 ++ LCRV + + D + + + T + +K + + I G ++F + Sbjct: 22 PALEAGVLLCRVLNVDRSYLYSHDDYNMTEEEYKKFTLFLEERIKGKPLQYITGHQEFMS 81 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + ++ D PR +TE LV++ L + RILD+GTG+G + ++L Sbjct: 82 LDFIVTPDVLIPRQDTETLVEAVLTHVKST--GLENARILDIGTGSGCIAVSLAHFLKDS 139 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-----------------EGLF 165 + + +DIS KALEIA++NA GV +R L+ D + EG F Sbjct: 140 RVLALDISEKALEIAETNAKRCGVWDRMFFLKGDALEGLAGIIAQSPFAKDFERKGEGFF 199 Query: 166 DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225 D+IVSNPPYI S + L +V+D++PR +LDGGIDGL YR I ++ L+ D L + Sbjct: 200 DIIVSNPPYIPSEEIKTLHKQVKDYEPRTALDGGIDGLDFYRAITCEAAKLLSTDSLLAF 259 Query: 226 EIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 E+GYNQ +V + + KD G DRV++ CR Sbjct: 260 EVGYNQAENVSEFMKES-FSAIKVVKDLAGIDRVVMGCR 297 >gi|150388170|ref|YP_001318219.1| HemK family modification methylase [Alkaliphilus metalliredigens QYMF] gi|149948032|gb|ABR46560.1| modification methylase, HemK family [Alkaliphilus metalliredigens QYMF] Length = 293 Score = 301 bits (771), Expect = 7e-80, Method: Composition-based stats. Identities = 82/266 (30%), Positives = 135/266 (50%), Gaps = 6/266 (2%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 D+ LC + Q+ + P+ +D+ + I + K + I+G ++F Sbjct: 23 PQLDAEVILCHLLKTERIQLHIYPERKVDEEVQEQFWEGIQKRKKRMPVQYIVGTQEFMG 82 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + + S PR +TE+LV+S L + V ++D+GTG+GA+ ++L + Sbjct: 83 LDFRVESGVLIPRADTEILVESVLGLYEVHY-NNEAVALMDIGTGSGAIAISLARFIERS 141 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-----EGLFDVIVSNPPYIES 177 K +D+S KALEIA++N TN V + F + EG F ++SNPPYI Sbjct: 142 KIYAIDLSEKALEIAENNGRTNEVQHKISFFYGSLFEPLKGYDLEGTFQFVISNPPYIPP 201 Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237 +V+ L +V+D++PR++L+GG DGL YR I + ++L G EIGY+Q V Sbjct: 202 DVVEELSPQVKDYEPRMALEGGADGLDFYREIVEKAPQYLQMKGWLCFEIGYDQGEQVKG 261 Query: 238 IFESRKLFLVNAFKDYGGNDRVLLFC 263 + E+R V +D G DRV++ Sbjct: 262 LMETRGFSRVEVIRDLAGLDRVVIGQ 287 >gi|163803584|ref|ZP_02197451.1| 2-dehydro-3-deoxyphosphooctonate aldolase [Vibrio sp. AND4] gi|159172626|gb|EDP57483.1| 2-dehydro-3-deoxyphosphooctonate aldolase [Vibrio sp. AND4] Length = 285 Score = 301 bits (771), Expect = 9e-80, Method: Composition-based stats. Identities = 90/261 (34%), Positives = 133/261 (50%), Gaps = 9/261 (3%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 D+ LC V G ++ P+ L+ Q+ + + R + E + I+G R+F+++ Sbjct: 28 LDAAVLLCHVLGKPRTYLLTWPEKALEIEQQAQFDDLLARRIAGEPVAYIIGEREFWSLP 87 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L +S T PRP+TE LV+ AL + + ILDLGTGTGA+ LAL E P + Sbjct: 88 LKVSPSTLIPRPDTERLVEIALDKTYAQTGP-----ILDLGTGTGAIALALASEMPKRQV 142 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIESVIVDC 182 +GVD+ +A ++A NA + Q WF + F +IVSNPPYI+ Sbjct: 143 MGVDLKQEAKDLAHYNASQLNIK-NVTFAQGCWFEPITSGTKFALIVSNPPYIDEQDPHL 201 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 +VR F+P+ +L +GL+ R I+D ++L G + E GY+Q V I + Sbjct: 202 SQGDVR-FEPKSALVADENGLADIRHISDLARQYLEAGGWLAFEHGYDQGDAVRTIMTNF 260 Query: 243 KLFLVNAFKDYGGNDRVLLFC 263 V KDYGGNDRV L C Sbjct: 261 GYEQVVTEKDYGGNDRVTLGC 281 >gi|239996063|ref|ZP_04716587.1| peptide release factor-glutamine N5-methyltransferase(HemK) [Alteromonas macleodii ATCC 27126] Length = 279 Score = 301 bits (771), Expect = 9e-80, Method: Composition-based stats. Identities = 94/259 (36%), Positives = 133/259 (51%), Gaps = 5/259 (1%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L + G S + P+ LD Q+ + + + E + I+G RDF+ + L Sbjct: 23 DAKVMLANILGKSQTYLFTWPNKTLDAAQKAQFEADVAKRKRGEPVAYIIGKRDFWTLSL 82 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 S DT PRP+TE+LV+ L ++ + I DLGTGTGA+ LAL E P Sbjct: 83 FTSPDTLIPRPDTEVLVEHVLNWANQHSSA--SLSICDLGTGTGAIALALASELPEASVT 140 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLG 184 GVD A+ +A NA N ++ +QSDWFS++ G FD+IVSNPPYIE Sbjct: 141 GVDFQAGAVNLATRNAQANSIA-NAHFVQSDWFSALAGQTFDIIVSNPPYIEESSPYLNE 199 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 +VR F+P+ +L G DGL + I + ++LNK L + E G++Q V + Sbjct: 200 GDVR-FEPKTALTSGSDGLDDIKQIINNAPQYLNKGALLAFEHGFDQGAAVNALLVDAGF 258 Query: 245 FLVNAFKDYGGNDRVLLFC 263 V KDYG NDRV L Sbjct: 259 VEVKTVKDYGDNDRVTLGQ 277 >gi|331085531|ref|ZP_08334615.1| protein-(glutamine-N5) methyltransferase [Lachnospiraceae bacterium 9_1_43BFAA] gi|330407418|gb|EGG86920.1| protein-(glutamine-N5) methyltransferase [Lachnospiraceae bacterium 9_1_43BFAA] Length = 277 Score = 300 bits (770), Expect = 1e-79, Method: Composition-based stats. Identities = 85/259 (32%), Positives = 129/259 (49%), Gaps = 8/259 (3%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 +A D+ L VTG+S + +++ + I R + + I G ++F Sbjct: 21 EAELDAWYLLEYVTGISRTMYYLKQAEPAEEQAAERYFDCISRRAQRIPLQHITGEQEFM 80 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 + ++ PR +TE+LV+ AL+ ++LD+ TG+G + ++L Sbjct: 81 GLPFIVNEHVLIPRQDTEILVEEALSHL------SGNEQVLDMCTGSGCILISLEHYRKG 134 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181 + VG DIS +AL++AK NA + L+SD F V +D+IVSNPPYI + ++ Sbjct: 135 IRAVGADISDEALQVAKRNAESLNAD--VTFLKSDLFEQVAERYDLIVSNPPYIRTKTIE 192 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 L EVR DP I+LDG DGL YR I + HL + G EIGY+Q DV ++ E Sbjct: 193 ELEEEVRLHDPMIALDGKEDGLYFYRKITEKSREHLKQGGWLLFEIGYDQGEDVAKMMEK 252 Query: 242 RKLFLVNAFKDYGGNDRVL 260 V KD G DRV+ Sbjct: 253 AGFTEVTVKKDLAGLDRVV 271 >gi|319406094|emb|CBI79724.1| Methylase [Bartonella sp. AR 15-3] Length = 288 Score = 300 bits (770), Expect = 1e-79, Method: Composition-based stats. Identities = 104/261 (39%), Positives = 149/261 (57%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 +A ++ + VTG ++ I+ P+ L Q L AI R + E ++RI+G R+FY Sbjct: 24 EADLNAKILVEWVTGTTASDRILQPNMCLSSEQLVQLEQAINRRIAGEPVYRIIGTREFY 83 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 + TLS DT EPRP+TE +VD L +EK + +LD+GTG+GA+ +A+LK+ P Sbjct: 84 GIPFTLSKDTLEPRPDTETVVDLVLPILKTYLEKSEQATLLDMGTGSGAIAIAILKQIPQ 143 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181 V VDIS AL+ A NA V+ RF L S+WF SV+G FD+I+SNPPYI + Sbjct: 144 TYAVAVDISEDALKTATKNAQHANVAHRFTPLLSNWFDSVKGQFDLIISNPPYIPEKEIK 203 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 L EVR DP +L GG DGL YR +A + +L + +VEIGY+Q+ +V +F+ Sbjct: 204 NLAKEVRQHDPLRALIGGKDGLDFYRKLAHESANYLKEKSYIAVEIGYSQEKEVCDLFKK 263 Query: 242 RKLFLVNAFKDYGGNDRVLLF 262 + +D R LLF Sbjct: 264 NGFKCLKIREDLNRIPRALLF 284 >gi|291520550|emb|CBK75771.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Butyrivibrio fibrisolvens 16/4] Length = 276 Score = 300 bits (769), Expect = 1e-79, Method: Composition-based stats. Identities = 87/260 (33%), Positives = 134/260 (51%), Gaps = 7/260 (2%) Query: 1 MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60 + A D+ L V+G++ Q + + + + ++R H + I G +DF Sbjct: 20 LDAKIDAWLLLSFVSGITKAQYFLKQSEEIPENTLYKYKEVLLRRASHVPLQHITGEQDF 79 Query: 61 YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120 + ++ PR +TE LV+ AL +LDL TG+G V ++L+ Sbjct: 80 MGLTFWVNEHVLIPRQDTETLVEEALKVI------PSGSHVLDLCTGSGCVIISLVALGQ 133 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180 G+GVDIS AL +A+ N V ++ + D F+ V+G F+ IVSNPPYI + +V Sbjct: 134 GLSGIGVDISEDALVVARENGTR-IVGKKVAFEKGDLFTGVQGRFNAIVSNPPYIPTAVV 192 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 + L +EV+D +PR++LDG DGL YR I +LN+ G VEIGY+Q DV ++F Sbjct: 193 EGLAVEVKDHEPRLALDGTEDGLLFYRRITASAQDYLNEGGWLLVEIGYDQGQDVSKLFT 252 Query: 241 SRKLFLVNAFKDYGGNDRVL 260 V +D GNDRV+ Sbjct: 253 DAGFKDVEVVQDLAGNDRVV 272 >gi|291547176|emb|CBL20284.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Ruminococcus sp. SR1/5] Length = 295 Score = 300 bits (769), Expect = 1e-79, Method: Composition-based stats. Identities = 88/272 (32%), Positives = 126/272 (46%), Gaps = 13/272 (4%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 +A D+ L TG + D + D I R H + ++ F Sbjct: 22 EAGLDAWLLLEFKTGKNRAYYFAHGDEPVSDETAAEYLTLIDRRAGHIPVQQLTHQAFFM 81 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 ++ + PR +TE LV+ AL + + ILD+ TG+G + L+LL E Sbjct: 82 GYEFYVNENVLIPRQDTETLVEEALK----HLGNVEKPEILDMCTGSGCILLSLLLERQD 137 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---------EGLFDVIVSNP 172 G GVD+S +ALE+AK NA V R D ++SD FS+ G +D+++SNP Sbjct: 138 ACGTGVDVSPEALEVAKKNAGILKVENRADFVESDLFSAPYFCEKGGKDSGKYDILISNP 197 Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232 PYI + ++ L EVR DPR +LDG DGL YR I R+L G EIG Q Sbjct: 198 PYIATEEIETLMEEVRLHDPRKALDGMEDGLYFYRKITAEAGRYLKPGGWLLYEIGCTQG 257 Query: 233 VDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 V + ++ V KD G DRV+L + Sbjct: 258 EAVSTMMKAAGFTGVQIVKDLPGLDRVVLGQK 289 >gi|319407579|emb|CBI81229.1| Methylase [Bartonella sp. 1-1C] Length = 288 Score = 300 bits (769), Expect = 1e-79, Method: Composition-based stats. Identities = 104/261 (39%), Positives = 150/261 (57%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 +A ++ + +TG ++ I+ P+ L +Q L AI R + E ++RI+G R+FY Sbjct: 24 EADLNAKILVEWITGTTASDRILQPNMYLSSQQLVQLEQAINRRIAGEPVYRIIGTREFY 83 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 + TLS DT EPRP+TE LVD L +EK + +LD+GTG+GA+ +A+LK+ P Sbjct: 84 GIPFTLSKDTLEPRPDTETLVDLVLPILKSHLEKSEQATLLDMGTGSGAIAIAILKQIPQ 143 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181 V VDIS AL+ A NA V+ RF L S+WF S++G FD+I+SNPPYI + Sbjct: 144 TYAVAVDISEDALKTATKNAQHANVAHRFTPLLSNWFDSIKGQFDLIISNPPYIPEKEIK 203 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 L EVR DP +L+GG DGL YR +A + +L + +VEIGY+Q+ V +FE Sbjct: 204 NLAKEVRQHDPWCALNGGEDGLYFYRKLAYESANYLKEKSYIAVEIGYSQEKKVRDLFEK 263 Query: 242 RKLFLVNAFKDYGGNDRVLLF 262 + +D R LLF Sbjct: 264 NGFKCLKIREDLNRIPRALLF 284 >gi|300723055|ref|YP_003712353.1| N5-glutamine methyltransferase [Xenorhabdus nematophila ATCC 19061] gi|297629570|emb|CBJ90173.1| N5-glutamine methyltransferase, modifies release factors RF-1 and RF-2 [Xenorhabdus nematophila ATCC 19061] Length = 286 Score = 300 bits (769), Expect = 1e-79, Method: Composition-based stats. Identities = 90/265 (33%), Positives = 138/265 (52%), Gaps = 10/265 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 RD+ L VTG S +I ++++ + L + + R ++ E I I+G R+F++ Sbjct: 20 PKRDAEILLQYVTGCSRTYLIAFSETLISPEEAHQLDSMLARRIRGEPIAYIVGEREFWS 79 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +S T PRP+TE LV+ AL + +ILDLGTGTGA+ LAL E Sbjct: 80 LSLAVSPATLIPRPDTECLVEKALE-----LLPDSPAQILDLGTGTGAIALALASERHDC 134 Query: 123 KGVGVDISCKALEIAKSNAVTN---GVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESV 178 GVDI+ A+ +AK NA N + LQS+WF+ V FD+IVSNPPYI+ Sbjct: 135 HVTGVDINPDAVALAKRNAERNTEKLPFHYVNFLQSEWFAEVGHRQFDMIVSNPPYIDEA 194 Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238 +VR F+P +L +G++ +TI + L +G +E G+ Q V + Sbjct: 195 DPHLREGDVR-FEPATALIAAQNGMADLQTIVEQARHFLLPNGWLLLEHGWKQGTVVRNL 253 Query: 239 FESRKLFLVNAFKDYGGNDRVLLFC 263 F + + F+DYGGN+R+ + Sbjct: 254 FLEKGYQRIATFQDYGGNERITVGR 278 >gi|260589192|ref|ZP_05855105.1| protein-(glutamine-N5) methyltransferase [Blautia hansenii DSM 20583] gi|331082608|ref|ZP_08331731.1| protein-(glutamine-N5) methyltransferase [Lachnospiraceae bacterium 6_1_63FAA] gi|260540273|gb|EEX20842.1| protein-(glutamine-N5) methyltransferase [Blautia hansenii DSM 20583] gi|330400227|gb|EGG79869.1| protein-(glutamine-N5) methyltransferase [Lachnospiraceae bacterium 6_1_63FAA] Length = 285 Score = 300 bits (769), Expect = 1e-79, Method: Composition-based stats. Identities = 87/262 (33%), Positives = 140/262 (53%), Gaps = 6/262 (2%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 A D+ L V+G+S V D + + I + KH + ++ FY Sbjct: 22 DANLDAWLLLEYVSGISRSWYFVHEDEEISENDIEEYQILIEQRGKHIPLQQLTKEAYFY 81 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 ++ ++ + PR +TE+LV+ L+ S ++++ +++LD+ TG+G + LALL Sbjct: 82 GMKFFVNENVLIPRQDTEVLVEQVLSLS----KEKENLKLLDMCTGSGCILLALLANLKQ 137 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181 G GVD+S KALE+A+ N+ G+ +QSD F V G +D+IVSNPPYIE+ +++ Sbjct: 138 ASGTGVDLSEKALEVAQRNSKELGIE--VSWVQSDLFDKVSGSYDIIVSNPPYIETSVIE 195 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 L EV+ ++PR++LDG DGL YR I ++L +G+ + EIGYNQ V + Sbjct: 196 GLMDEVKLYEPRMALDGTEDGLFFYREITMQAGKYLKNNGILAFEIGYNQGKAVSEFMKE 255 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 V +D G DRV+ Sbjct: 256 NGYKEVQVLQDLAGLDRVVTGR 277 >gi|78484733|ref|YP_390658.1| HemK family modification methylase [Thiomicrospira crunogena XCL-2] gi|78363019|gb|ABB40984.1| modification methylase, HemK family [Thiomicrospira crunogena XCL-2] Length = 279 Score = 300 bits (769), Expect = 2e-79, Method: Composition-based stats. Identities = 84/262 (32%), Positives = 128/262 (48%), Gaps = 6/262 (2%) Query: 4 LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63 D+ L V + + P+ L + + + R ++ I ++G R+F+ + Sbjct: 23 ALDAELLLSFVLQKNRTYLYTWPEKPLSEAEHTQYFDLTSRRVEGHPIAHLIGHREFWGM 82 Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 ++ DT PRP+TE+LV++AL + + LDLGTG+GA+ A+ P + Sbjct: 83 DFQVTPDTLIPRPDTEILVETALE--IMASKNNQAWSFLDLGTGSGAIACAIKASHPACE 140 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDC 182 VD AL +A+ NA + ++ Q WF V+G FD+IVSNPPYIE Sbjct: 141 ATAVDFQASALAVAQQNANQHHLT--IHFKQGSWFDPVKGQTFDLIVSNPPYIEEHDPHL 198 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 +VR F+P +L G DGL R I + +L G +E GYNQ V R+F+++ Sbjct: 199 KEGDVR-FEPLTALTSGEDGLDDIRFIIEHAPTYLKPKGWLLIEHGYNQHEAVQRLFKAQ 257 Query: 243 KLFLVNAFKDYGGNDRVLLFCR 264 V + DYG N RV L R Sbjct: 258 GFTAVESRLDYGQNPRVTLGQR 279 >gi|77920282|ref|YP_358097.1| putative protoporphyrinogen oxidase [Pelobacter carbinolicus DSM 2380] gi|77546365|gb|ABA89927.1| [protein release factor]-glutamine N5-methyltransferase [Pelobacter carbinolicus DSM 2380] Length = 287 Score = 300 bits (768), Expect = 2e-79, Method: Composition-based stats. Identities = 94/261 (36%), Positives = 141/261 (54%), Gaps = 7/261 (2%) Query: 4 LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63 RD+ L G+ + ++ D L++ + +V+ + E + ILG +F+++ Sbjct: 27 RRDAELLLGASLGMDRVGLYLNFDRPLEESELTAYRALVVKRARREPLQYILGETEFWSL 86 Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 L++S PRP+TE+LV+ AL + + R+LD+GTG+GA+ +AL E + Sbjct: 87 PLSVSPAVLIPRPDTEVLVEEALRVA-------NGSRVLDVGTGSGAIAIALAHELADAQ 139 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183 V +DI +AL +A NA NGV +R L+ D EG FD+IVSNPPYI + +D L Sbjct: 140 VVALDICPQALAVAADNARRNGVDDRVRFLERDLAQLPEGPFDLIVSNPPYIPAADLDGL 199 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 EVRDF+PR +L+GG DGL YR +A L G VE+G +Q V ++F+ Sbjct: 200 MPEVRDFEPRQALNGGQDGLDPYRLLAAQADTCLVPGGWLLVEVGIDQAAAVRQLFDDAG 259 Query: 244 LFLVNAFKDYGGNDRVLLFCR 264 L DYGG RV+ R Sbjct: 260 LVDGFVRDDYGGVPRVVGARR 280 >gi|330863232|emb|CBX73358.1| protein methyltransferase hemK [Yersinia enterocolitica W22703] Length = 279 Score = 300 bits (768), Expect = 2e-79, Method: Composition-based stats. Identities = 95/261 (36%), Positives = 134/261 (51%), Gaps = 7/261 (2%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 RD+ L VTG + ++ +S L Q L R + E I ++G R+F++ Sbjct: 15 PKRDAEILLSFVTGRARTYLLAFGESQLTAEQLAVLEPLAARREQGEPIAYLVGEREFWS 74 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L++SS T PRP+TE LV+ ALA RILDLGTGTGA+ LAL E P F Sbjct: 75 LPLSVSSATLIPRPDTECLVEQALAHL-----PATPCRILDLGTGTGAIALALASERPDF 129 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182 +GVDI A+ +A+ NA + D LQS WF SV G F +IVSNPPYI++ Sbjct: 130 AVMGVDIKADAVALARHNAKKLAI-NNVDFLQSSWFDSVSGRFTLIVSNPPYIDANDPHL 188 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 +VR ++P +L +G++ I +L G +E G+ Q V ++ + Sbjct: 189 NEGDVR-YEPHSALVAEAEGIADLAEIIRQSPAYLEVGGWLILEHGWQQATAVQKLLNNS 247 Query: 243 KLFLVNAFKDYGGNDRVLLFC 263 V +KDYG NDRV L Sbjct: 248 GFSAVMTYKDYGNNDRVTLGQ 268 >gi|253990003|ref|YP_003041359.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253781453|emb|CAQ84616.1| protein methyltranferase hemk (protein-glutamine n methyltransferase) [Photorhabdus asymbiotica] Length = 283 Score = 299 bits (767), Expect = 2e-79, Method: Composition-based stats. Identities = 94/262 (35%), Positives = 131/262 (50%), Gaps = 8/262 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 RD+ L VT S ++ ++ + Q L + R K E I I G R+F++ Sbjct: 21 PKRDAEILLGFVTRHSRTYILAFGETQISPEQFSQLETLLARRAKGEPIAYITGEREFWS 80 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + LT+S T PRP+TE LV+ AL RILDLGTGTGA+ LA+ E Sbjct: 81 LSLTVSPATLIPRPDTECLVEKALECL-----SLTPCRILDLGTGTGAIALAIASERSDC 135 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVD 181 + GVDI+ A+ +A+ NA + D L S+WFSS+ FD+IVSNPPYI+ Sbjct: 136 QVTGVDINPDAVMLAQGNAEKLKIQ-NVDFLNSNWFSSLNNQQFDMIVSNPPYIDEADPH 194 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P +L G + +TI D L DG +E G+ Q V +F Sbjct: 195 LFQGDVR-FEPDSALIAAEQGTADLKTIIDLSRNFLLPDGWLLLEHGWKQGDVVRSLFSE 253 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 V F+DYGGN+R+ L Sbjct: 254 SGYQQVATFQDYGGNERITLGQ 275 >gi|226329847|ref|ZP_03805365.1| hypothetical protein PROPEN_03759 [Proteus penneri ATCC 35198] gi|225200642|gb|EEG82996.1| hypothetical protein PROPEN_03759 [Proteus penneri ATCC 35198] Length = 282 Score = 299 bits (767), Expect = 2e-79, Method: Composition-based stats. Identities = 86/262 (32%), Positives = 138/262 (52%), Gaps = 8/262 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 RD+ L VT + ++ +++L + L+ + R +K E I ++G R+F++ Sbjct: 20 PKRDAEILLGHVTQRARTYLMAFNETLLSQDELTQLSQLLTRRIKGEPIAYLVGEREFWS 79 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +S T PRP+TE LV+ AL + + ILDLGTGTGA+ LA+ E P Sbjct: 80 LPLKVSPATLIPRPDTECLVEQALEKL-----PTEPITILDLGTGTGAIALAMASERPDC 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181 +GVD +A+ +A+ NA ++ + ++S WFSS+ G F +I+SNPPYI+ Sbjct: 135 HIIGVDFQAEAVALAQENATRLALNNT-EFMESCWFSSLSGYQFGMIISNPPYIDENDEH 193 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P +L G +G + I + + L G +E G+ Q V +IF Sbjct: 194 IHQGDVR-FEPLTALVAGNNGFADIEIIIETARQFLTDKGWVLLEHGWQQGEGVRKIFTD 252 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 + V F+DYGGN+RV + Sbjct: 253 KGYCCVETFRDYGGNERVTVGR 274 >gi|153854178|ref|ZP_01995486.1| hypothetical protein DORLON_01477 [Dorea longicatena DSM 13814] gi|149753227|gb|EDM63158.1| hypothetical protein DORLON_01477 [Dorea longicatena DSM 13814] Length = 287 Score = 299 bits (766), Expect = 3e-79, Method: Composition-based stats. Identities = 89/266 (33%), Positives = 137/266 (51%), Gaps = 12/266 (4%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 +A D+ L TG+S + DPD +++ + I + + I G ++F Sbjct: 26 EAKLDAWYLLEYKTGISRAVFLADPDREVEEEKAESYQKDICTRARRIPLQHITGEQEFM 85 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK---- 117 + ++ + PR +TE+LV+ AL P ++ ILD+ TG+G + ++LK Sbjct: 86 GLNFKVNENVLVPRQDTEILVEEALKRIRPDMQ------ILDMCTGSGCILESILKFGEK 139 Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIES 177 + KG G DIS +AL++A+ N G RF ++SD F SV +D+IVSNPPYI + Sbjct: 140 KQMHLKGTGCDISEEALKVARENNSRLGTDARF--IKSDLFESVTEKYDMIVSNPPYIRT 197 Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237 + L EV+ DP I+LDG DGL YR I R+LNK G EIG++Q DV Sbjct: 198 EEISRLDEEVKLHDPWIALDGKEDGLYFYRLIVKDSIRYLNKGGYILFEIGFDQGKDVSE 257 Query: 238 IFESRKLFLVNAFKDYGGNDRVLLFC 263 + ++ + KD G DRV++ Sbjct: 258 LLKNEGYEEIEIKKDLAGLDRVVMGR 283 >gi|126701108|ref|YP_001090005.1| protein methyltransferase [Clostridium difficile 630] gi|254977109|ref|ZP_05273581.1| protein methyltransferase [Clostridium difficile QCD-66c26] gi|255102694|ref|ZP_05331671.1| protein methyltransferase [Clostridium difficile QCD-63q42] gi|255308515|ref|ZP_05352686.1| protein methyltransferase [Clostridium difficile ATCC 43255] gi|255316189|ref|ZP_05357772.1| protein methyltransferase [Clostridium difficile QCD-76w55] gi|255518850|ref|ZP_05386526.1| protein methyltransferase [Clostridium difficile QCD-97b34] gi|255652029|ref|ZP_05398931.1| protein methyltransferase [Clostridium difficile QCD-37x79] gi|260685004|ref|YP_003216289.1| protein methyltransferase [Clostridium difficile CD196] gi|260688662|ref|YP_003219796.1| protein methyltransferase [Clostridium difficile R20291] gi|306521771|ref|ZP_07408118.1| protein methyltransferase [Clostridium difficile QCD-32g58] gi|115252545|emb|CAJ70388.1| Modification methylase HemK [Clostridium difficile] gi|260211167|emb|CBA66623.1| protein methyltransferase [Clostridium difficile CD196] gi|260214679|emb|CBE07316.1| protein methyltransferase [Clostridium difficile R20291] Length = 282 Score = 299 bits (766), Expect = 3e-79, Method: Composition-based stats. Identities = 87/263 (33%), Positives = 139/263 (52%), Gaps = 7/263 (2%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 D+ L + G+ + ++ + L + Q+ L I I+ R+F Sbjct: 21 PRLDTELLLQKTLGVDRLYIHLNLNKELTEEQKTKFMGFAEERLNGRPIAYIVENREFMG 80 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + + PRP+TE LV+ + ++ V ILD+GTG+GA+ ++L K Sbjct: 81 LDFFVKEGVLIPRPDTETLVEEIIEICR----EKKDVSILDIGTGSGAITISLAKYIENS 136 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG---LFDVIVSNPPYIESVI 179 K + DIS ALEIAK NA+ N V E+ + SD F+++ FD+IVSNPPYI+ Sbjct: 137 KIMSFDISETALEIAKKNAIINEVGEKIKYINSDLFTAISDSNIKFDIIVSNPPYIKKQD 196 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 ++ L +V+D++P +L+GG DGL YR I + ++LNK G+ + E+G+NQ DV+ I Sbjct: 197 IETLHKQVKDYEPYNALEGGEDGLDFYRRITEQGKKYLNKCGILAYEVGHNQAEDVINIM 256 Query: 240 ESRKLFLVNAFKDYGGNDRVLLF 262 +S + KD G DRV++ Sbjct: 257 KSNGYKKIYTKKDIQGIDRVVIG 279 >gi|319404589|emb|CBI78195.1| Methylase [Bartonella rochalimae ATCC BAA-1498] Length = 288 Score = 299 bits (766), Expect = 3e-79, Method: Composition-based stats. Identities = 104/261 (39%), Positives = 150/261 (57%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 +A ++ + +TG ++ I+ P+ L +Q L AI R + E ++RI+G R+FY Sbjct: 24 EADLNAKILVEWITGTTASDRILQPNMYLSSQQLVQLEQAINRRIAGEPVYRIIGTREFY 83 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 + TLS DT EPRP+TE LVD L +EK + +LD+GTG+GA+ +A+LK+ P Sbjct: 84 GIPFTLSKDTLEPRPDTETLVDLVLPILKSHLEKSEQATLLDMGTGSGAIAIAILKQIPQ 143 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181 V VDIS AL+ A NA V+ RF L S+WF S++G FD+I+SNPPYI + Sbjct: 144 TYAVAVDISEDALKTATKNAQHANVAHRFIPLLSNWFDSIKGQFDLIISNPPYIPEKEIK 203 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 L EVR DP +L+GG DGL YR +A + +L + +VEIGY+Q+ V +FE Sbjct: 204 NLAKEVRQHDPWRALNGGEDGLYFYRKLAYESANYLKEKSYIAVEIGYSQEKKVRDLFEK 263 Query: 242 RKLFLVNAFKDYGGNDRVLLF 262 + +D R LLF Sbjct: 264 NGFKCLKIREDLNKIPRALLF 284 >gi|190893590|ref|YP_001980132.1| protoporphyrinogen oxidase (methyltransferase) protein [Rhizobium etli CIAT 652] gi|190698869|gb|ACE92954.1| protoporphyrinogen oxidase (methyltransferase) protein [Rhizobium etli CIAT 652] Length = 286 Score = 299 bits (766), Expect = 3e-79, Method: Composition-based stats. Identities = 116/262 (44%), Positives = 160/262 (61%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 D+ + + SS +++ L Q ++ A+ R L HE +HRILG R+FY Sbjct: 23 DPATDARLLVAGLLKQSSTELLTRSAEKLSPDQIAMISKALERRLGHEPVHRILGEREFY 82 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 + L LS++T EPRP+TE+LVD+ LA+ + + ILD+GTGTGA+CLALL E P Sbjct: 83 GLPLQLSAETLEPRPDTEILVDTVLAYLKDLAKAHGDLHILDIGTGTGAICLALLSECPE 142 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181 G+G DIS AL A+SNA +G+ +RF +QS WF ++ G F IVSNPPYI S ++ Sbjct: 143 ASGIGSDISADALGTARSNAERHGLQDRFHAVQSSWFENIRGSFHAIVSNPPYIASNVIH 202 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 L EV FDP +LDGG DGL Y IA +R + DG+ +EIGY+Q+ DV IFE+ Sbjct: 203 DLAPEVTKFDPVAALDGGPDGLDAYHAIAKDAARFMRPDGVLGLEIGYDQRNDVTAIFEA 262 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 + + + KDYG NDR L+F Sbjct: 263 KGFRCLKSVKDYGQNDRALMFA 284 >gi|323142097|ref|ZP_08076945.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Phascolarctobacterium sp. YIT 12067] gi|322413484|gb|EFY04355.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Phascolarctobacterium sp. YIT 12067] Length = 307 Score = 298 bits (765), Expect = 4e-79, Method: Composition-based stats. Identities = 100/263 (38%), Positives = 140/263 (53%), Gaps = 4/263 (1%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 D+ LC V ++ + D L + +R + + + R KHE + I+G R F Sbjct: 26 NPRLDAEVLLCAVLKCERIKLYTEFDKPLSEEERDKMRSYVERRAKHEPLAYIIGERAFM 85 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 ++ T PRPETELLV+S L + P + V+ LD+GTG+GA+ ++LL P Sbjct: 86 RNNFKVTPATLVPRPETELLVES-LVKAAPMLRADGAVKALDIGTGSGAIIVSLLDYLPA 144 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS--SVEGLFDVIVSNPPYIESVI 179 GVGVDIS +AL +AK NA GV +R QSD FS VE FD+IVSNPPYI + Sbjct: 145 AVGVGVDISNEALAVAKENAAAIGVDKRVAFRQSDLFSNVPVEKKFDIIVSNPPYIPAAD 204 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 + L +V+ +PR +LDGG DGL YR I + HL +DGL + EIG +Q V ++ Sbjct: 205 IATLAQDVQQ-EPRTALDGGADGLDFYRRICAEAAEHLAEDGLLAFEIGIDQSEAVQKLC 263 Query: 240 ESRKLFLVNAFKDYGGNDRVLLF 262 DY G R++ Sbjct: 264 LEHGFAKTAVRMDYAGIPRMIFA 286 >gi|291524541|emb|CBK90128.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Eubacterium rectale DSM 17629] Length = 283 Score = 298 bits (765), Expect = 4e-79, Method: Composition-based stats. Identities = 85/260 (32%), Positives = 128/260 (49%), Gaps = 8/260 (3%) Query: 1 MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60 + A D+ L ++ V D + Q + + + + I+G ++F Sbjct: 20 VDAKNDAWLLLAMACRINHTYYYVHMDEEMSQEQIREYQALLSKRAERIPLQYIVGEQEF 79 Query: 61 YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120 ++ ++S+ PR +TE LV+ AL P +R+LD+ TG+G + +++LK + Sbjct: 80 MGLKFRVNSNVLIPRQDTETLVEEALKVIEP------GMRVLDMCTGSGCIIISILKNTT 133 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180 G DIS +AL +AK NA NGV D +SD F V+ ++DVIVSNPPYI S + Sbjct: 134 NVDGAACDISKQALNVAKENARLNGVF--VDFERSDLFEHVDEMYDVIVSNPPYIRSDEI 191 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 L EV F+P +LDG DGL YR I +L G EIG +Q V + + Sbjct: 192 PHLMPEVSVFEPHEALDGSEDGLLFYRRIIKDCRANLKPQGRLLFEIGCDQGRQVSEMMQ 251 Query: 241 SRKLFLVNAFKDYGGNDRVL 260 V+ KD GNDRV+ Sbjct: 252 FAGFSDVHVIKDLAGNDRVV 271 >gi|49475008|ref|YP_033049.1| protoporphyrinogen oxidase protein [Bartonella henselae str. Houston-1] gi|49237813|emb|CAF27008.1| Protoporphyrinogen oxidase protein [Bartonella henselae str. Houston-1] Length = 288 Score = 298 bits (765), Expect = 4e-79, Method: Composition-based stats. Identities = 105/261 (40%), Positives = 146/261 (55%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 +A D+ + +T + ++ PD L Q L AI R + E ++RI+G R+FY Sbjct: 24 EANLDAKILVEWITDTNISDRVLQPDLCLSFEQILQLEKAIQRRIAGEPVYRIIGKREFY 83 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 + LS +T EPR +TE LVD L EK + + +LD+GTG+GA+ +A+LK+ P Sbjct: 84 GISFALSQETLEPRSDTETLVDLVLPPLKKYGEKSEKITLLDMGTGSGAIAIAILKQIPQ 143 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181 V VDIS AL+ A NA + V RF L SDWF SV G FD+I+SNPPYI + Sbjct: 144 SYAVAVDISENALKTATKNAKSAKVINRFTPLLSDWFDSVTGQFDLIISNPPYIPETDIT 203 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 L EV DP +L GG DGL YR ++D + +L + G +VEIGY+Q+ +V +FE Sbjct: 204 KLAKEVHLHDPLRALIGGKDGLDFYRKLSDKAANYLKEKGSIAVEIGYSQEKEVCDLFEK 263 Query: 242 RKLFLVNAFKDYGGNDRVLLF 262 + KD G R LLF Sbjct: 264 NGFKCLEMRKDLNGIPRALLF 284 >gi|291527967|emb|CBK93553.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Eubacterium rectale M104/1] Length = 283 Score = 298 bits (765), Expect = 4e-79, Method: Composition-based stats. Identities = 85/260 (32%), Positives = 128/260 (49%), Gaps = 8/260 (3%) Query: 1 MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60 + A D+ L + V D + Q + + + + I+G ++F Sbjct: 20 VDAKNDAWLLLAMACRIDHTYYYVHMDEEMSQEQIREYQALLSKRAERIPLQYIVGEQEF 79 Query: 61 YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120 ++ ++S+ PR +TE LV+ AL P +R+LD+ TG+G + +++LK + Sbjct: 80 MGLKFRVNSNVLIPRQDTETLVEEALKVIEP------GMRVLDMCTGSGCIIISILKNTT 133 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180 G DIS +AL +AK NA NGV D +SD F V+ ++DVIVSNPPYI S + Sbjct: 134 NVDGAACDISKQALNVAKENARLNGVF--VDFERSDLFEHVDEMYDVIVSNPPYIRSDEI 191 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 L EV F+P +LDG DGL YR I +L G EIG +Q V ++ + Sbjct: 192 PHLMPEVSVFEPHEALDGSEDGLLFYRRIIKDCRANLKPHGRLLFEIGCDQGRQVSQMMQ 251 Query: 241 SRKLFLVNAFKDYGGNDRVL 260 V+ KD GNDRV+ Sbjct: 252 FAGFSDVHVIKDLAGNDRVV 271 >gi|332161452|ref|YP_004298029.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|318605429|emb|CBY26927.1| methylase of polypeptide chain release factors [Yersinia enterocolitica subsp. palearctica Y11] gi|325665682|gb|ADZ42326.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Yersinia enterocolitica subsp. palearctica 105.5R(r)] Length = 284 Score = 298 bits (764), Expect = 4e-79, Method: Composition-based stats. Identities = 95/261 (36%), Positives = 134/261 (51%), Gaps = 7/261 (2%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 RD+ L VTG + ++ +S L Q L R + E I ++G R+F++ Sbjct: 20 PKRDAEILLSFVTGRARTYLLAFGESQLTAEQLAVLEPLAARREQGEPIAYLVGEREFWS 79 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L++SS T PRP+TE LV+ ALA RILDLGTGTGA+ LAL E P F Sbjct: 80 LPLSVSSATLIPRPDTECLVEQALAHL-----PATPCRILDLGTGTGAIALALASERPDF 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182 +GVDI A+ +A+ NA + D LQS WF SV G F +IVSNPPYI++ Sbjct: 135 AVMGVDIKADAVALARHNAKKLAI-NNVDFLQSSWFDSVSGRFTLIVSNPPYIDANDPHL 193 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 +VR ++P +L +G++ I +L G +E G+ Q V ++ + Sbjct: 194 NEGDVR-YEPHSALVAEAEGIADLAEIIRQSPAYLEVGGWLILEHGWQQATAVQKLLNNS 252 Query: 243 KLFLVNAFKDYGGNDRVLLFC 263 V +KDYG NDRV L Sbjct: 253 GFSAVMTYKDYGNNDRVTLGQ 273 >gi|14517939|gb|AAK64442.1|AF377339_3 protoporphyrinogen oxidase HemK [Myxococcus xanthus] Length = 293 Score = 298 bits (764), Expect = 5e-79, Method: Composition-based stats. Identities = 87/259 (33%), Positives = 125/259 (48%), Gaps = 7/259 (2%) Query: 7 SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66 + L V LS ++ VD D L + I R + E + G R+FYN Sbjct: 31 AEILLSHVLKLSRVRLYVDLDRPLSKDELGAYRALIERRMAGEPTQYLTGVREFYNRPFK 90 Query: 67 LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126 + + PRPETELLV++AL + K R LDL TG+G + ++L E P + Sbjct: 91 VDARVLIPRPETELLVEAALRM----LPKDAPGRALDLCTGSGCIAISLAAERPQATVIA 146 Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIESVIVDCLG 184 D+S A +A+ NA GV++R LQ D F+ V F V+VSNPPYI S + L Sbjct: 147 TDLSPDACALARENAQALGVADRVTVLQGDLFTPVPAGERFQVVVSNPPYIASGEIPGLS 206 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 EVR +P ++LDGG DGL R + G + L GL ++EIG +Q V+ + + Sbjct: 207 AEVRR-EPTLALDGGPDGLVAVRRVVTGARQWLEPGGLLALEIGEDQGPAVLELLRAAGY 265 Query: 245 FLVNAFKDYGGNDRVLLFC 263 KD +R+ Sbjct: 266 ADARVEKDLERRERMAFGT 284 >gi|123442666|ref|YP_001006643.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122089627|emb|CAL12477.1| putative protoporphyrinogen oxidase [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 284 Score = 298 bits (764), Expect = 5e-79, Method: Composition-based stats. Identities = 93/261 (35%), Positives = 133/261 (50%), Gaps = 7/261 (2%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 RD+ L VTG + ++ ++ L Q L R + E I ++G R+F++ Sbjct: 20 PKRDAEILLSFVTGRARSYLLAFGETQLTAEQLAVLEPLAARREQGEPIAYLVGEREFWS 79 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L++SS T PRP+TE LV+ ALA RILDLGTGTGA+ LAL E P Sbjct: 80 LPLSVSSATLIPRPDTECLVEQALAHL-----PVTPCRILDLGTGTGAIALALASERPDC 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182 +GVDI A+ +A+ NA + D LQS WF SV G F +IVSNPPYI++ Sbjct: 135 AVMGVDIKADAVALARHNAKKLAI-NNVDFLQSSWFDSVSGRFTLIVSNPPYIDANDPHL 193 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 +VR ++P +L +G++ I +L G +E G+ Q V ++ + Sbjct: 194 NEGDVR-YEPHSALVAEAEGIADLAEIIRQSPAYLEVGGWLMLEHGWQQATAVQKLLNNS 252 Query: 243 KLFLVNAFKDYGGNDRVLLFC 263 V +KDYG NDRV L Sbjct: 253 GFSAVMTYKDYGNNDRVTLAQ 273 >gi|157826325|ref|YP_001494045.1| bifunctional N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase/tRNA (m7G46) methyltransferase [Rickettsia akari str. Hartford] gi|157800283|gb|ABV75537.1| bifunctional N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase/tRNA (m7G46) methyltransferase [Rickettsia akari str. Hartford] Length = 522 Score = 298 bits (764), Expect = 5e-79, Method: Composition-based stats. Identities = 88/278 (31%), Positives = 135/278 (48%), Gaps = 19/278 (6%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 ++ L V ++++ D L + + + R LKHE I I G ++FY Sbjct: 23 PPQLEARILLQHVIHKPIEYLLINLDEQLSEAEIKAFEKLLERRLKHEPITYITGVKEFY 82 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAF------------------SLPRIEKRDVVRILD 103 + ++ PR +TE+LVD L L + IL+ Sbjct: 83 SREFIVNKHVLIPRSDTEILVDVVLQRYSHSTQGHSTESGKPETKKLDSVVNPRNDSILE 142 Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-E 162 LGTG+G V ++LL E P + DIS +A+E+AKSNA+ + V++R + SDWF ++ + Sbjct: 143 LGTGSGCVAISLLCELPNANIIATDISIEAIEVAKSNAIKHHVTDRIQIIHSDWFENLGK 202 Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL 222 FDVIVSNPPYI + LE + +P +L DGL YR IA L +G Sbjct: 203 QKFDVIVSNPPYISHSEKSEMALETLNHEPHFALFAEEDGLQAYRIIAKNAKPFLKPNGK 262 Query: 223 CSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 +EIG+NQ V +IF + + N +KD ++RV+ Sbjct: 263 IILEIGFNQAEKVSKIFLNYGYNIDNIYKDLQSHNRVI 300 >gi|166032747|ref|ZP_02235576.1| hypothetical protein DORFOR_02462 [Dorea formicigenerans ATCC 27755] gi|166027104|gb|EDR45861.1| hypothetical protein DORFOR_02462 [Dorea formicigenerans ATCC 27755] Length = 299 Score = 298 bits (764), Expect = 5e-79, Method: Composition-based stats. Identities = 87/265 (32%), Positives = 129/265 (48%), Gaps = 14/265 (5%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 A D+ L VTG+S +P+ + + + + + + + I G ++F Sbjct: 26 DAQIDAWYLLEYVTGISRASYYGNPEKNISEEEAKRYWEYLEKRARRIPLQHITGSQEFM 85 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 ++ PR +TE LV+ AL P + +LD+ TG+G + ++LLK + Sbjct: 86 GYEFLVNEHVLIPRQDTENLVEEALKVIRPDM------HVLDMCTGSGCILISLLKYAAE 139 Query: 122 FK------GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYI 175 K VG DIS ALE+AK NA V +QSD F +V FD+IVSNPPYI Sbjct: 140 RKHITGGKAVGADISADALEVAKKNAQRLKVP--VIWVQSDIFENVSESFDLIVSNPPYI 197 Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235 + ++ L EV+ DP I+LDG DGL YR I HLN EIG++Q DV Sbjct: 198 RTEVIQGLEDEVKLHDPWIALDGHEDGLYFYRRIVSESISHLNDGAWLMFEIGHDQAEDV 257 Query: 236 VRIFESRKLFLVNAFKDYGGNDRVL 260 ++ ++ + KD G DRV+ Sbjct: 258 SKLMKNAGFCNIYVKKDLAGLDRVV 282 >gi|39998193|ref|NP_954144.1| HemK family modification methylase [Geobacter sulfurreducens PCA] gi|39985139|gb|AAR36494.1| modification methylase, HemK family [Geobacter sulfurreducens PCA] gi|298507131|gb|ADI85854.1| peptide chain release factor methyltransferase [Geobacter sulfurreducens KN400] Length = 284 Score = 298 bits (764), Expect = 6e-79, Method: Composition-based stats. Identities = 81/260 (31%), Positives = 128/260 (49%), Gaps = 9/260 (3%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 A ++ L GL + V+ D L+ + + R K E + ILG ++F Sbjct: 28 NARLETEWLLSAALGLDRVGLYVNFDKPLNPEELAACRGLVARRAKREPLQYILGTQEFC 87 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 + ++ PR +TE++V+ AL + +LD+G G+G + +AL K+ P Sbjct: 88 GLDFVVTPSVLIPRHDTEVIVEEALRRA------PHAAAVLDIGVGSGCIAVALAKQLPH 141 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIV 180 + VGV+ S A+ +A+ NA +G R + F + + FD+IVSNPPYI + + Sbjct: 142 AQVVGVEQSPGAIALAQRNAERHGA--RVTLFEGSLFEPLGDQRFDLIVSNPPYIPTADL 199 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 + L EVR+++PR +LDGG DGL YR I +LN G VE+G Q V+ +F Sbjct: 200 EALQPEVREYEPRAALDGGSDGLDFYRLIVPAAPEYLNPGGWLMVELGIGQAETVLGMFS 259 Query: 241 SRKLFLVNAFKDYGGNDRVL 260 +D G DRV+ Sbjct: 260 RTGFCDCFTAQDPNGIDRVV 279 >gi|327193409|gb|EGE60309.1| protoporphyrinogen oxidase (methyltransferase) protein [Rhizobium etli CNPAF512] Length = 279 Score = 298 bits (763), Expect = 6e-79, Method: Composition-based stats. Identities = 116/262 (44%), Positives = 160/262 (61%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 D+ + + SS +++ L Q ++ A+ R L HE +HRILG R+FY Sbjct: 16 DPATDARLLVAGLLKQSSTELLTRSAEKLSPDQIAMISKALERRLGHEPVHRILGEREFY 75 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 + L LS++T EPRP+TE+LVD+ LA+ + + ILD+GTGTGA+CLALL E P Sbjct: 76 GLPLQLSAETLEPRPDTEILVDTVLAYLKDLAKAHGDLHILDIGTGTGAICLALLSECPE 135 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181 G+G DIS AL A+SNA +G+ +RF +QS WF ++ G F IVSNPPYI S ++ Sbjct: 136 ASGIGSDISADALGTARSNAERHGLQDRFQAVQSSWFENIRGSFHAIVSNPPYIASNVIH 195 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 L EV FDP +LDGG DGL Y IA +R + DG+ +EIGY+Q+ DV IFE+ Sbjct: 196 DLAPEVTKFDPVAALDGGPDGLDAYHAIAKDAARFMRPDGVLGLEIGYDQRNDVTAIFEA 255 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 + + + KDYG NDR L+F Sbjct: 256 KGFRCLKSVKDYGQNDRALMFA 277 >gi|238923859|ref|YP_002937375.1| putative rRNA or tRNA methylase [Eubacterium rectale ATCC 33656] gi|238875534|gb|ACR75241.1| predicted rRNA or tRNA methylase [Eubacterium rectale ATCC 33656] Length = 283 Score = 298 bits (763), Expect = 7e-79, Method: Composition-based stats. Identities = 85/260 (32%), Positives = 128/260 (49%), Gaps = 8/260 (3%) Query: 1 MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60 + A D+ L ++ V D + Q + + + + I+G ++F Sbjct: 20 VDAKNDAWLLLAMACRINHTYYYVHMDEEMSQEQIGEYQALLSKRAERIPLQYIVGEQEF 79 Query: 61 YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120 ++ ++S+ PR +TE LV+ AL P +R+LD+ TG+G + +++LK + Sbjct: 80 MGLKFRVNSNVLIPRQDTETLVEEALKVIEP------GMRVLDMCTGSGCIIISILKNTT 133 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180 G DIS +AL +AK NA NGV D +SD F V+ ++DVIVSNPPYI S + Sbjct: 134 NVDGAACDISKQALNVAKENARINGVF--VDFERSDLFEHVDEMYDVIVSNPPYIRSDEI 191 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 L EV F+P +LDG DGL YR I +L G EIG +Q V + + Sbjct: 192 PHLMPEVSVFEPHEALDGSEDGLLFYRRIIKDCRANLKPQGRLLFEIGCDQGRQVSEMMQ 251 Query: 241 SRKLFLVNAFKDYGGNDRVL 260 V+ KD GNDRV+ Sbjct: 252 FAGFSDVHVIKDLAGNDRVV 271 >gi|108759552|ref|YP_633065.1| putative protein methyltransferase HemK [Myxococcus xanthus DK 1622] gi|108463432|gb|ABF88617.1| putative protein methyltransferase HemK [Myxococcus xanthus DK 1622] Length = 293 Score = 297 bits (762), Expect = 8e-79, Method: Composition-based stats. Identities = 86/259 (33%), Positives = 125/259 (48%), Gaps = 7/259 (2%) Query: 7 SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66 + L V LS ++ VD D L + I R + E + G R+FYN Sbjct: 31 AEILLSHVLKLSRVRLYVDLDRPLSKDELGAYRALIERRMAGEPTQYLTGVREFYNRPFK 90 Query: 67 LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126 + + PRPETELLV++AL + K R LD+ TG+G + ++L E P + Sbjct: 91 VDARVLIPRPETELLVEAALRM----LPKDAPGRALDVCTGSGCIAISLAAERPQATVIA 146 Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIESVIVDCLG 184 D+S A +A+ NA GV++R LQ D F+ V F V+VSNPPYI S + L Sbjct: 147 TDLSPDACALARENAQALGVADRVTVLQGDLFTPVPAGERFQVVVSNPPYIASGEIPGLS 206 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 EVR +P ++LDGG DGL R + G + L GL ++EIG +Q V+ + + Sbjct: 207 AEVRR-EPTLALDGGPDGLVAVRRVVTGARQWLEPGGLLALEIGEDQGPAVLELLRAAGY 265 Query: 245 FLVNAFKDYGGNDRVLLFC 263 KD +R+ Sbjct: 266 ADARVEKDLERRERMAFGT 284 >gi|325578169|ref|ZP_08148304.1| protein methyltransferase HemK [Haemophilus parainfluenzae ATCC 33392] gi|325159905|gb|EGC72034.1| protein methyltransferase HemK [Haemophilus parainfluenzae ATCC 33392] Length = 292 Score = 297 bits (762), Expect = 9e-79, Method: Composition-based stats. Identities = 101/266 (37%), Positives = 149/266 (56%), Gaps = 12/266 (4%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L TG S Q++ ++ +D++ R LT + R LK E I ILG ++F+++ L Sbjct: 26 DALVLLQHATGKSRTQILAFDETEIDEKVRLKLTALLDRRLKGEPIAYILGEKEFWSLPL 85 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALLKESP---- 120 +S T PRP+TE+LV+ AL +L ++E+ RILDLGTGTGA+ LAL E Sbjct: 86 NVSEGTLIPRPDTEILVEKALHIALEKLEENPPHFRILDLGTGTGAIALALASELSPICQ 145 Query: 121 ----FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE 176 +GVD+ + +++A+SNA N + + LQS WF +VEG FD+IVSNPPYI+ Sbjct: 146 KKHIQLDVIGVDLMPEVVKLAQSNAEKNQL--KVQFLQSRWFENVEGQFDIIVSNPPYID 203 Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236 +VR F+PR +L G +GL+ R + + HL +G +E G+ Q +V Sbjct: 204 EADEHLFQGDVR-FEPRSALVAGENGLADLRHLIEYAPGHLKDNGYLLLEHGWKQGEEVR 262 Query: 237 RIFESRKLFLVNAFKDYGGNDRVLLF 262 IF V +DYG N+RV L Sbjct: 263 SIFWQNHWQGVATIRDYGDNERVTLG 288 >gi|168704925|ref|ZP_02737202.1| modification methylase, HemK family protein [Gemmata obscuriglobus UQM 2246] Length = 291 Score = 297 bits (762), Expect = 1e-78, Method: Composition-based stats. Identities = 84/265 (31%), Positives = 125/265 (47%), Gaps = 7/265 (2%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A ++ L V + + D D +R I R L + ++G R FY Sbjct: 30 AKLEAELLLAHVLQTDRTYLTMRFDEEPTDAERAKYKELITRRLAGWPVAYLVGSRGFYL 89 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + + PR +TE LV AL R++ +LD+GTG+G + ++L + Sbjct: 90 LNFDVDPAVLIPRSDTETLVGEALK----RLKPLTAPAVLDIGTGSGCIAVSLAHQKKDS 145 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIV 180 D+S AL +AK NA+ N V++R LQ D F+ + FD++VSNPPYI Sbjct: 146 HVTATDVSPDALAVAKRNAIKNNVADRMTFLQGDLFAPLPAGVTFDLVVSNPPYIAQSEF 205 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 L +VRD +PR++LDGG DGL+ YR IA V L G +EIG+ Q V + Sbjct: 206 AELAPDVRDHEPRVALDGGPDGLAFYRRIAAAVGPFLKPGGSLLLEIGWKQDAAVRALIA 265 Query: 241 SRKLFLVN-AFKDYGGNDRVLLFCR 264 + + KD G N RV+ + Sbjct: 266 EQPELELGPTIKDMGKNPRVVTAKK 290 >gi|118581410|ref|YP_902660.1| HemK family modification methylase [Pelobacter propionicus DSM 2379] gi|118504120|gb|ABL00603.1| [protein release factor]-glutamine N5-methyltransferase [Pelobacter propionicus DSM 2379] Length = 288 Score = 297 bits (761), Expect = 1e-78, Method: Composition-based stats. Identities = 92/265 (34%), Positives = 133/265 (50%), Gaps = 10/265 (3%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 A ++ LC TGL + ++ D L+ + + R + E + ILG ++F Sbjct: 27 NARLEAEWLLCAATGLDRVGLYLNYDKPLNREELSAFRQMVARRARREPLQHILGSQEFC 86 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 + +S D PR +TE LV+ AL + +LD+GTG+G + ++L + P Sbjct: 87 GLEFAVSPDVLIPRHDTETLVEEALRRA------PLARTVLDIGTGSGCIAVSLARRLPG 140 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIV 180 + V DIS ALE+A++NA NGV + L V G FD+IVSNPPYI S + Sbjct: 141 ARIVASDISAVALEMARANARANGVD--VEFLHGSLLEPVAGRCFDLIVSNPPYIPSADI 198 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 L EVRD DPR++LDGG DGL YR + HL G +E+G Q DV +F Sbjct: 199 QLLEPEVRDGDPRLALDGGPDGLDIYRRLIPASLEHLEPGGWLLLEVGMGQAQDVAEMFP 258 Query: 241 -SRKLFLVNAFKDYGGNDRVLLFCR 264 + V + D GG +RV+ R Sbjct: 259 LADGYGQVVSSPDPGGIERVVGAAR 283 >gi|67459736|ref|YP_247360.1| bifunctional N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase/tRNA (m7G46) methyltransferase [Rickettsia felis URRWXCal2] gi|75535874|sp|Q4UJU4|HEMK_RICFE RecName: Full=Bifunctional methyltransferase; Includes: RecName: Full=HemK protein homolog; Includes: RecName: Full=tRNA (guanine-N(7)-)-methyltransferase; AltName: Full=tRNA(m7G46)-methyltransferase gi|67005269|gb|AAY62195.1| Methylase of polypeptide chain release factors, tRNA (guanine-N(7)-)-methyltransferase [Rickettsia felis URRWXCal2] Length = 527 Score = 297 bits (761), Expect = 1e-78, Method: Composition-based stats. Identities = 91/284 (32%), Positives = 147/284 (51%), Gaps = 24/284 (8%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 + ++ L V ++++ D L++ + + R LKHE I I+G ++FY+ Sbjct: 24 SQLEARILLRYVINKPIEYLLINLDEQLNEVEIEAFEKLLERRLKHEPIAYIIGIKEFYS 83 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV----------------------- 99 ++ PR +TE+LVD + S R KR V Sbjct: 84 REFIVNKHVLIPRADTEVLVDVCVHKSSLRATKRSVAISGILSKIASSTPMASSRNDEYT 143 Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 +IL+LGTG+G + ++LL E P + V DIS A+E+A++NA+ V++R + S+WF Sbjct: 144 KILELGTGSGCIAISLLCELPNARVVATDISLDAIEVARNNALKYHVTDRIQIIHSNWFE 203 Query: 160 SV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 ++ + FDVIVSNPPYI + + LE + +P I+L DGL YR IA+ + L Sbjct: 204 NLGKQKFDVIVSNPPYISTDEKPEMALETLNHEPYIALFAEEDGLQAYRIIAENAKKFLK 263 Query: 219 KDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262 +G +EIG+ Q+ V +IF S + + +KD G+ RV+LF Sbjct: 264 PNGKIVLEIGFKQEEAVTQIFLSNGYNIESVYKDLQGHSRVILF 307 >gi|85860526|ref|YP_462728.1| peptide release factor-glutamine N5-methyltransferase [Syntrophus aciditrophicus SB] gi|85723617|gb|ABC78560.1| peptide release factor-glutamine N5-methyltransferase [Syntrophus aciditrophicus SB] Length = 316 Score = 297 bits (761), Expect = 1e-78, Method: Composition-based stats. Identities = 84/259 (32%), Positives = 126/259 (48%), Gaps = 3/259 (1%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 D+ L + P + R+ + + R K E + I+G ++F++ Sbjct: 50 PRLDAEVLLASFLKKDRTWLYTHPGQDVSAREMDGFSFWVARRQKGEPVAYIIGRKEFWS 109 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + + PRP+TE+LV+ + R ILDLGTG+GA+ +AL E P Sbjct: 110 LDFAVDPRVLIPRPDTEVLVEEVIKVLGSGRASRP--EILDLGTGSGAIAVALAHECPHA 167 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182 + DIS KAL ++ NA +GV+ R L+ + V G FDVIVSNPPYI+S Sbjct: 168 RITATDISRKALAVSAGNAERHGVASRITFLEGNLLDPVMGKFDVIVSNPPYIDSGDYAR 227 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 L EVR+F+PR +L G G+ Y I + L G +EIG +QK ++ R+F+ Sbjct: 228 LSAEVRNFEPREALLAGEQGMDFYSAIIPQAACRLKPGGWLLLEIGDSQKENLNRLFQQS 287 Query: 243 K-LFLVNAFKDYGGNDRVL 260 + KDY G RV+ Sbjct: 288 DAYQDLAFRKDYAGRWRVV 306 >gi|325660745|ref|ZP_08149373.1| hypothetical protein HMPREF0490_00105 [Lachnospiraceae bacterium 4_1_37FAA] gi|325472819|gb|EGC76029.1| hypothetical protein HMPREF0490_00105 [Lachnospiraceae bacterium 4_1_37FAA] Length = 277 Score = 297 bits (760), Expect = 1e-78, Method: Composition-based stats. Identities = 85/259 (32%), Positives = 129/259 (49%), Gaps = 8/259 (3%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 +A D+ L VTG+S + +++ + I R + + I G ++F Sbjct: 21 EAELDAWYLLEYVTGISRTMYYLKQAEPAEEQAAERYFDCISRRAQRIPLQHITGEQEFM 80 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 + ++ PR +TE+LV+ AL+ ++LD+ TG+G + ++L Sbjct: 81 GLPFIVNEHVLIPRQDTEILVEEALSHL------SGNEQVLDMCTGSGCILISLEHYRKG 134 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181 + VG DIS +AL++AK NA + L+SD F V +D+IVSNPPYI + ++ Sbjct: 135 IRAVGADISDEALQVAKRNAESLNAD--VTFLKSDLFEQVAERYDLIVSNPPYIRTKAIE 192 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 L EVR DP I+LDG DGL YR I + HL + G EIGY+Q DV ++ E Sbjct: 193 ELEEEVRLHDPMIALDGKEDGLYFYRKITEKSREHLKQGGCLLFEIGYDQGEDVAKMMEK 252 Query: 242 RKLFLVNAFKDYGGNDRVL 260 V KD G DRV+ Sbjct: 253 AGFTEVTVKKDLAGLDRVV 271 >gi|27363733|ref|NP_759261.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Vibrio vulnificus CMCP6] gi|320157138|ref|YP_004189517.1| methylase of polypeptide chain release factors [Vibrio vulnificus MO6-24/O] gi|27359849|gb|AAO08788.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Vibrio vulnificus CMCP6] gi|319932450|gb|ADV87314.1| methylase of polypeptide chain release factors [Vibrio vulnificus MO6-24/O] Length = 291 Score = 297 bits (760), Expect = 1e-78, Method: Composition-based stats. Identities = 88/260 (33%), Positives = 128/260 (49%), Gaps = 9/260 (3%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 D+ LC V + PD +L ++++ + R L E + I+G R+F+++ Sbjct: 28 LDAAVLLCHVLDKPRSYLFTWPDKILTEQEQQQFEALVARRLSGEPVAYIIGEREFWSLP 87 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 ++ T PRP+TE LV+ AL + ILDLGTGTGA+ +AL E P Sbjct: 88 FKVAPSTLIPRPDTERLVELALEKT-----ATQTGSILDLGTGTGAIAIALASELPHRTV 142 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDC 182 +GVD+ +A +A+SNA+ + Q WF V F +IVSNPPYI+ Sbjct: 143 MGVDLQQEAKLLAESNALALNIK-NVTFKQGSWFEPVAQGTKFALIVSNPPYIDENDPHL 201 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 +VR F+P+ +L GL+ R IA +L G E GY+Q + V I ++ Sbjct: 202 NQGDVR-FEPKSALVAEESGLADIRYIAQQARDYLEPHGWLMFEHGYDQGIAVREILDTL 260 Query: 243 KLFLVNAFKDYGGNDRVLLF 262 V KDYGGNDRV L Sbjct: 261 GYQEVATEKDYGGNDRVTLG 280 >gi|255657439|ref|ZP_05402848.1| protein methyltransferase [Clostridium difficile QCD-23m63] gi|296449036|ref|ZP_06890826.1| protein-(glutamine-N5) methyltransferase [Clostridium difficile NAP08] gi|296879859|ref|ZP_06903832.1| protein-(glutamine-N5) methyltransferase [Clostridium difficile NAP07] gi|296262129|gb|EFH08934.1| protein-(glutamine-N5) methyltransferase [Clostridium difficile NAP08] gi|296429148|gb|EFH15022.1| protein-(glutamine-N5) methyltransferase [Clostridium difficile NAP07] Length = 282 Score = 297 bits (760), Expect = 2e-78, Method: Composition-based stats. Identities = 88/263 (33%), Positives = 140/263 (53%), Gaps = 7/263 (2%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 D+ L + G+ + ++ + L + Q+ L I I+ R+F Sbjct: 21 PRLDTELLLQKTLGVDRLYIHLNLNKELTEEQKTEFIGFAEERLNGRPIAYIVENREFMG 80 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + + PRP+TE LV+ + ++ V ILD+GTG+GA+ ++L K Sbjct: 81 LDFFVKEGVLIPRPDTETLVEEIIEICR----EKKDVSILDIGTGSGAITISLAKYIENS 136 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG---LFDVIVSNPPYIESVI 179 K + DIS ALEIAK NA+TN V E+ + SD F+++ FD+IVSNPPYI+ Sbjct: 137 KIMSFDISEIALEIAKKNAITNEVDEKIKYINSDLFTAISNSNIKFDIIVSNPPYIKKQD 196 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 ++ L +V+D++P +L+GG DGL YR I + ++LNK G+ + E+G+NQ DV+ I Sbjct: 197 IETLHTQVKDYEPYNALEGGEDGLDFYRRITEQGKKYLNKFGILAYEVGHNQAEDVINIM 256 Query: 240 ESRKLFLVNAFKDYGGNDRVLLF 262 +S + KD G DRV++ Sbjct: 257 KSNGYKKIYTKKDIQGIDRVVIG 279 >gi|167759399|ref|ZP_02431526.1| hypothetical protein CLOSCI_01746 [Clostridium scindens ATCC 35704] gi|167662956|gb|EDS07086.1| hypothetical protein CLOSCI_01746 [Clostridium scindens ATCC 35704] Length = 283 Score = 297 bits (760), Expect = 2e-78, Method: Composition-based stats. Identities = 84/259 (32%), Positives = 125/259 (48%), Gaps = 8/259 (3%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 +A D+ L TG+S DPD + + + I + I + F Sbjct: 26 EAALDAWYLLEFATGISKASYYGDPDKEIKEEEAARYLGYIEIRKSRIPLQHITKEQAFM 85 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 + PR +TE LV+ AL P ++ +LDL TG+G + ++L+K Sbjct: 86 GYPFYVDEHVLIPRQDTETLVEEALKVLKPGMQ------VLDLCTGSGCILISLMKMCKG 139 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181 G G DIS ALE+A+ NA + ++S F + G +D+IVSNPPYI + +++ Sbjct: 140 LYGTGSDISEDALEVARKNACR--LEVNAAFIRSSLFEHISGRYDLIVSNPPYIPTSVIE 197 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 L EVR +DP I+LDG DGL YR I R+L +G EIGY+Q +V + E Sbjct: 198 GLQEEVRLYDPFIALDGKEDGLYFYREIIKAGIRYLRPEGYLMFEIGYDQGNEVACLMEK 257 Query: 242 RKLFLVNAFKDYGGNDRVL 260 + + KD G DRV+ Sbjct: 258 QGYRNILVKKDLAGLDRVV 276 >gi|301156076|emb|CBW15547.1| N5-glutamine methyltransferase, modifies release factors RF-1 and RF-2 [Haemophilus parainfluenzae T3T1] Length = 292 Score = 296 bits (759), Expect = 2e-78, Method: Composition-based stats. Identities = 102/266 (38%), Positives = 147/266 (55%), Gaps = 12/266 (4%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L TG S Q++ ++ +D++ R LT + R LK E I ILG ++F+++ L Sbjct: 26 DALVLLQHATGKSRTQILAFDETEIDEKVRLKLTALLDRRLKGEPIAYILGEKEFWSLSL 85 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALLKESP---- 120 +S T PRP+TE+LV+ AL +L ++E+ RILDLGTGTGA+ LAL E Sbjct: 86 NVSEGTLIPRPDTEILVEKALQIALEKLEENPPHFRILDLGTGTGAIALALASELSPICQ 145 Query: 121 ----FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE 176 +GVD+ + +E+A+SNA N + + LQS WF VE FD+IVSNPPYI+ Sbjct: 146 KKNIQLDVIGVDLMPEVVELAQSNAEKNQL--KVQFLQSRWFEHVEVQFDIIVSNPPYID 203 Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236 +VR F+PR +L G +GL+ R + + HLN G +E G+ Q +V Sbjct: 204 ETDEHLFQGDVR-FEPRSALVAGENGLADLRHLIEYAPGHLNDGGYLLLEHGWKQGEEVR 262 Query: 237 RIFESRKLFLVNAFKDYGGNDRVLLF 262 IF V +DYG N+RV L Sbjct: 263 SIFWQNHWQGVATIRDYGDNERVTLG 288 >gi|189424096|ref|YP_001951273.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Geobacter lovleyi SZ] gi|189420355|gb|ACD94753.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Geobacter lovleyi SZ] Length = 286 Score = 296 bits (759), Expect = 2e-78, Method: Composition-based stats. Identities = 88/260 (33%), Positives = 131/260 (50%), Gaps = 9/260 (3%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 A R++ LC TGL + ++ D L D + + + R K E + ILG ++F Sbjct: 28 NARREAEWLLCEATGLDRMGLYLNFDKPLQDDELAAYRSMVARRGKREPLQHILGSQEFD 87 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 + ++ D PR +TE L++ A+ + +LD+GTG+G + ++L P Sbjct: 88 GLEFIVTRDVLIPRFDTETLLEEAVRQA------PTARTVLDIGTGSGCIAISLFHRLPQ 141 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIV 180 VD+S AL IA+ NA N + + L +F V E FD+IVSNPPYI S + Sbjct: 142 AAITAVDLSPDALSIARRNAERNNA--QIEFLLGSFFQPVSERRFDLIVSNPPYITSADL 199 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 L EVRDF+PR++LDGG DGL YR +A R+L +G +EIG Q DV + Sbjct: 200 ADLQPEVRDFEPRLALDGGTDGLDAYRVLAAEAPRYLEPNGWLLLEIGAGQDKDVATLLA 259 Query: 241 SRKLFLVNAFKDYGGNDRVL 260 + + D G RV+ Sbjct: 260 DAGFDAIVSVPDNAGIIRVV 279 >gi|37679116|ref|NP_933725.1| methylase of polypeptide chain release factor [Vibrio vulnificus YJ016] gi|37197858|dbj|BAC93696.1| methylase of polypeptide chain release factor [Vibrio vulnificus YJ016] Length = 291 Score = 296 bits (759), Expect = 2e-78, Method: Composition-based stats. Identities = 88/260 (33%), Positives = 128/260 (49%), Gaps = 9/260 (3%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 D+ LC V + PD +L ++++ + R L E + I+G R+F+++ Sbjct: 28 LDAAVLLCHVLDKPRSYLFTWPDKILTEQEQQQFEALVARRLSGEPVAYIIGEREFWSLP 87 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 ++ T PRP+TE LV+ AL + ILDLGTGTGA+ +AL E P Sbjct: 88 FKVAPSTLIPRPDTERLVELALEKT-----ATQTGSILDLGTGTGAIAIALASELPHRTV 142 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVDC 182 +GVD+ +A +A+SNA+ + Q WF V F +IVSNPPYI+ Sbjct: 143 MGVDLQQEAKLLAESNALALNIK-NVTFKQGSWFEPVVQGTKFALIVSNPPYIDENDPHL 201 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 +VR F+P+ +L GL+ R IA +L G E GY+Q + V I ++ Sbjct: 202 NQGDVR-FEPKSALVAEESGLADIRYIAQQARDYLEPHGWLMFEHGYDQGIAVREILDTL 260 Query: 243 KLFLVNAFKDYGGNDRVLLF 262 V KDYGGNDRV L Sbjct: 261 GYQEVATEKDYGGNDRVTLG 280 >gi|222053789|ref|YP_002536151.1| modification methylase, HemK family [Geobacter sp. FRC-32] gi|221563078|gb|ACM19050.1| modification methylase, HemK family [Geobacter sp. FRC-32] Length = 284 Score = 296 bits (759), Expect = 2e-78, Method: Composition-based stats. Identities = 87/261 (33%), Positives = 128/261 (49%), Gaps = 10/261 (3%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 A +S LC V GL + V+ D L ++ I R + E + ILG ++F Sbjct: 27 NARLESEWMLCAVLGLDRMGLYVNFDKPLTPKELADYRGMIARRGRREPLQYILGSQEFM 86 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 + ++ PR +TE+LV+ A+ + ILD+GTG+G + ++L K P Sbjct: 87 GLDFAVAPAVLIPRHDTEVLVNEAVKRA------GKTSSILDVGTGSGCISISLAKALPG 140 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIV 180 GVD S AL +A+ N T+GV+ L F V+G F ++VSNPPYI S + Sbjct: 141 AIITGVDTSVDALAVAEKNCNTHGVA--VKLLHGSLFEPVQGQQFHMVVSNPPYIPSDDL 198 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 L EVRD++P +LDGG DGL YR I + +L G +E+G Q V ++F Sbjct: 199 KTLQPEVRDYEPAGALDGGKDGLDFYRQIVAAATDYLVCGGWLLLEVGIGQAEQVRKLFF 258 Query: 241 SRK-LFLVNAFKDYGGNDRVL 260 V A KD +RV+ Sbjct: 259 DNGKFAEVFAAKDTADIERVV 279 >gi|49473851|ref|YP_031893.1| protoporphyrinogen oxidase protein [Bartonella quintana str. Toulouse] gi|49239354|emb|CAF25687.1| Protoporphyrinogen oxidase protein [Bartonella quintana str. Toulouse] Length = 288 Score = 296 bits (759), Expect = 2e-78, Method: Composition-based stats. Identities = 103/262 (39%), Positives = 144/262 (54%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 +A D+ + +TG ++ I+ PD L Q L AI R + E ++RI+G R+FY Sbjct: 24 EANLDAKILVEWITGTNASVRILHPDLCLSFEQITQLEQAIQRRINGEPVYRIIGKREFY 83 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 + LS +T EPRP+TE LVD L ++K +LD+GTG+GA+ +A+LK+ P Sbjct: 84 GISFALSQETLEPRPDTETLVDLVLPLLKKYVDKLGKTTLLDMGTGSGAIAIAILKQIPQ 143 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181 VDIS AL+ A NA V RF L S+WF SV FD+I+SNPPYI + Sbjct: 144 SYATAVDISKDALKTAIKNAKNAKVIHRFTPLLSNWFDSVTDRFDLIISNPPYIPETDIK 203 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 L EVR DP +L GG DGL YR +A + +L G +VEIG++Q+ +V +FE Sbjct: 204 NLAKEVRLHDPLRALIGGKDGLHFYRKLAHEATNYLKTKGSLAVEIGHSQEKEVCDLFEK 263 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 + +D G R LLF Sbjct: 264 NGFQFLEMRRDLSGIPRALLFT 285 >gi|219870998|ref|YP_002475373.1| HemK-like protein/protein-glutamine N-methyl transferase [Haemophilus parasuis SH0165] gi|219691202|gb|ACL32425.1| HemK-like protein/protein-glutamine N-methyl transferase [Haemophilus parasuis SH0165] Length = 289 Score = 296 bits (759), Expect = 2e-78, Method: Composition-based stats. Identities = 92/264 (34%), Positives = 145/264 (54%), Gaps = 4/264 (1%) Query: 1 MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60 + A D++ L VT S + ++ L++ + L + R K E + ILG ++F Sbjct: 24 LNAKADANILLQAVTKRSKSAIFAFAETELNESELRQLAELLARRAKGEPMAYILGEKEF 83 Query: 61 YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120 +++ L +S+ T PRP+TE LV+ AL ++ R++ ++ILDLGTGTGA+ LAL E Sbjct: 84 WSLPLAVSTATLIPRPDTERLVEVALEWAYKRLDSSKNLQILDLGTGTGAIALALASELG 143 Query: 121 -FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESV 178 + +G+D A+++A+ N G E LQSDWF +++ FD+IVSNPPYI+ Sbjct: 144 TKAEIIGIDKQPDAVQLAEKNRQKLGF-ENVRFLQSDWFEALKNQRFDLIVSNPPYIDKD 202 Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238 + +VR F+P +L +GLS + I +L +G +E G+ Q V I Sbjct: 203 DENLTQGDVR-FEPLTALVAEQNGLSDLQKIIQNAPLYLTPNGALMLEHGWQQAASVQDI 261 Query: 239 FESRKLFLVNAFKDYGGNDRVLLF 262 F+ + V F+DYGGNDRV + Sbjct: 262 FQQNQWNAVTTFQDYGGNDRVTVA 285 >gi|289577388|ref|YP_003476015.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Thermoanaerobacter italicus Ab9] gi|289527101|gb|ADD01453.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Thermoanaerobacter italicus Ab9] Length = 279 Score = 296 bits (758), Expect = 2e-78, Method: Composition-based stats. Identities = 85/263 (32%), Positives = 131/263 (49%), Gaps = 9/263 (3%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 ++ L ++ + + + + Q I H I+ + F Sbjct: 20 NPRLEAELLLAHCFKINRTALFLRREEEVSKEQLERFLEFINMRKSHIPYQYIVKKQCFM 79 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 + + + PRPETE+LV+ AL R+++ DV +LD+GTG+GA+ +++ K P Sbjct: 80 GLEFFVDENVLIPRPETEILVEEALK----RLKRGDV--VLDIGTGSGAIAVSIAKYFPD 133 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVI 179 VDIS KA+EIAK NA GV +R ++SD F ++ FD IVSNPPYI+ Sbjct: 134 CTVYAVDISKKAIEIAKHNAEKQGVLDRIFFIESDLFCNLPPNLKFDFIVSNPPYIKKRE 193 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 ++ L EV+ +P ++LDGG DGL Y+ I ++ G EIGY+QK +V + Sbjct: 194 IELLQEEVKK-EPIVALDGGEDGLFFYKKIIREAPFYIKSGGKIGFEIGYSQKEEVTTLL 252 Query: 240 ESRKLFLVNAFKDYGGNDRVLLF 262 E V KD G DRV++ Sbjct: 253 EESGFKDVEIIKDLAGIDRVIIA 275 >gi|255280025|ref|ZP_05344580.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bryantella formatexigens DSM 14469] gi|255269116|gb|EET62321.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bryantella formatexigens DSM 14469] Length = 307 Score = 296 bits (758), Expect = 3e-78, Method: Composition-based stats. Identities = 82/263 (31%), Positives = 119/263 (45%), Gaps = 9/263 (3%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 +A D+ L VTG+ + + I R +H + + G ++F Sbjct: 53 EADVDAWILLEYVTGIDRTHYFLKMQEPCPQEEDKRYRELIGRRAQHVPVQYLTGVQEFM 112 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 ++S PR +TELLV A R+LD+ TG+G + ++L K + Sbjct: 113 GYPFRVNSQVLIPRQDTELLVLEAEKRI------HPGARVLDMCTGSGCIIISLAKRN-H 165 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181 DIS AL +A+ NA V + ++SD F ++ G +D IVSNPPYI S + Sbjct: 166 ICAAAADISEGALAVARENAGALQVEA--EFIKSDLFENIAGTYDCIVSNPPYIASGEIP 223 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 L EVRD++PR +LDG DGL YR I + L G EIG +Q V +FE Sbjct: 224 GLMPEVRDYEPRTALDGKADGLYFYRRIVAQAKQFLKPQGWLLCEIGCDQGAAVAALFEQ 283 Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264 + KD G RV+ R Sbjct: 284 EGYREIEVKKDLAGLFRVVSGRR 306 >gi|88861345|ref|ZP_01135975.1| N5-glutamine methyltransferase, modifies release factors RF-1 and RF-2 [Pseudoalteromonas tunicata D2] gi|88816611|gb|EAR26436.1| N5-glutamine methyltransferase, modifies release factors RF-1 and RF-2 [Pseudoalteromonas tunicata D2] Length = 281 Score = 295 bits (757), Expect = 3e-78, Method: Composition-based stats. Identities = 94/262 (35%), Positives = 134/262 (51%), Gaps = 8/262 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A D+ L V G S + PD L +Q+ A+ R L E I I+G+R+F++ Sbjct: 24 AKLDAQVLLLDVIGQSRSYLFTWPDKALTAQQQTQFEQAVARRLAGEPIAHIIGYREFWS 83 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 ++L +S T PRP+TE LV+ AL+ +LP + ++LDLGTGTGA+ LAL E + Sbjct: 84 LKLKVSPATLIPRPDTETLVEHALSLALP-----EHAKVLDLGTGTGAIALALASEQFNW 138 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVD 181 + G D A+ +A++N + +QS+WFS+ FD+IVSNPPYIE Sbjct: 139 QVTGCDRIEDAVVLAQTNQAALEIK-NCRFVQSNWFSAFSTEQFDLIVSNPPYIEQDDPH 197 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P +L +GL+ RTI + L G +E GY Q V IF Sbjct: 198 LSQGDVR-FEPLSALVAPDNGLADIRTIVNQARTFLTSGGYLLLEHGYQQAEQVSAIFLQ 256 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 + KD GNDRV L Sbjct: 257 MAYKDIRTIKDLAGNDRVTLAR 278 >gi|296101960|ref|YP_003612106.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295056419|gb|ADF61157.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 276 Score = 295 bits (757), Expect = 4e-78, Method: Composition-based stats. Identities = 92/262 (35%), Positives = 131/262 (50%), Gaps = 8/262 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 RD+ L VTG + ++ ++ L Q L+ + R E + ++G R+F++ Sbjct: 20 PKRDAEILLEYVTGKARTYLLAFGETELTVEQEAQLSALLARRKTGEPVAHLVGEREFWS 79 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +S+ T PRP+TE LV+ ALA RILDLGTGTGA+ LAL E P Sbjct: 80 LPLFVSAATLIPRPDTECLVEQALARL-----PAAASRILDLGTGTGAIALALATERPDC 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181 VD+ A+ +A+ N GV+ LQS WFS++E F +IVSNPPYI+ Sbjct: 135 AVTAVDVMPDAVALAQRNVERLGVT-NVTVLQSSWFSALEKQTFAMIVSNPPYIDEHDPH 193 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P +L G GL+ I +HL G VE G+ Q V +F Sbjct: 194 LAQGDVR-FEPLTALVAGNAGLADLEHIVTTSRQHLLPGGWLLVEHGWTQGEAVRGLFRQ 252 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 V +DYGGN+R+ L Sbjct: 253 TGYAAVETCRDYGGNERLTLGQ 274 >gi|78221602|ref|YP_383349.1| modification methylase HemK [Geobacter metallireducens GS-15] gi|78192857|gb|ABB30624.1| [protein release factor]-glutamine N5-methyltransferase [Geobacter metallireducens GS-15] Length = 284 Score = 295 bits (756), Expect = 4e-78, Method: Composition-based stats. Identities = 83/260 (31%), Positives = 126/260 (48%), Gaps = 9/260 (3%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 A ++ L GL + V+ D L+ + + + R K E + +LG ++F Sbjct: 28 NARLETEWLLSAALGLDRVGLYVNFDKPLNAEELSAVRGLVARRAKREPLQYVLGTQEFC 87 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 + ++ PR +TE+LV+ AL + +LD+G G+G + +AL K P Sbjct: 88 GLDFAVTPAVLIPRHDTEVLVEEALRRA------PHAATVLDIGVGSGCIAVALAKNLPD 141 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIV 180 + GV+ S A+ +A+ N +GV R F + FD+IVSNPPYI + + Sbjct: 142 AQVWGVEQSAGAITLARQNVERHGV--RVILCAGSLFEPFADQRFDLIVSNPPYIPTADL 199 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 D L EVR+++PR +LDGG DGL YR I HLN G VE+G Q V+ +F+ Sbjct: 200 DTLQPEVREYEPRAALDGGADGLDFYRIIVPAALEHLNAGGWLMVELGIGQAEAVLGMFK 259 Query: 241 SRKLFLVNAFKDYGGNDRVL 260 KD G DRV+ Sbjct: 260 QAGFTGCFTAKDLNGIDRVV 279 >gi|323496830|ref|ZP_08101867.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Vibrio sinaloensis DSM 21326] gi|323318089|gb|EGA71063.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Vibrio sinaloensis DSM 21326] Length = 286 Score = 295 bits (756), Expect = 4e-78, Method: Composition-based stats. Identities = 90/261 (34%), Positives = 131/261 (50%), Gaps = 9/261 (3%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 D+ LC G ++ PD L Q + R +K E + I+G R+F+++ Sbjct: 28 LDAAVLLCHSLGKPRSFLLTWPDKELTTEQIERFEQLLSRRIKGEPVAYIIGEREFWSLP 87 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L+++ T PRP+TE LV+ AL + + ILDLGTGTGA+ LAL E P K Sbjct: 88 LSVAPSTLIPRPDTERLVEVALDKA-----NLNQGDILDLGTGTGAIALALASELPERKV 142 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDC 182 G+D+ A ++A SNA G++ + WF V+ F +IVSNPPYIE Sbjct: 143 WGIDLKIDAQQLASSNADKLGIT-NCEFRAGSWFDPVDAGTQFALIVSNPPYIEENDPHL 201 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 +VR F+P +L +GL+ + I++ R+L G E GY+Q V I S Sbjct: 202 TQGDVR-FEPLSALVAEDNGLADIKHISEHARRYLLAGGWLMFEHGYDQGKAVRDILTSL 260 Query: 243 KLFLVNAFKDYGGNDRVLLFC 263 + V +KDYG NDRV + Sbjct: 261 GYYQVETYKDYGNNDRVTIGQ 281 >gi|297543675|ref|YP_003675977.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|296841450|gb|ADH59966.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 279 Score = 295 bits (755), Expect = 6e-78, Method: Composition-based stats. Identities = 84/263 (31%), Positives = 131/263 (49%), Gaps = 9/263 (3%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 ++ L ++ + + + + Q I H I+ + F Sbjct: 20 NPRLEAELLLAHCFEINRTALFLRREEEISKEQLERFLEFINMRKSHIPYQYIVKKQYFM 79 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 + + + PRPETE+LV+ +L R+++ DV +LD+GTG+GA+ +++ K P Sbjct: 80 GLEFFVDENVLIPRPETEILVEE----TLKRLKRGDV--VLDIGTGSGAIAVSIAKYFPD 133 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVI 179 VDIS KA+EIAK NA GV +R ++SD F ++ FD IVSNPPYI+ Sbjct: 134 CTVYAVDISKKAIEIAKHNAKKQGVLDRIFFIESDLFCNLPPNLKFDFIVSNPPYIKKRE 193 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 ++ L EV+ +P ++LDGG DGL Y+ I ++ G EIGY+QK +V + Sbjct: 194 IELLQEEVKK-EPIVALDGGEDGLFFYKKIIREAPFYIKSGGKIGFEIGYSQKEEVTTLL 252 Query: 240 ESRKLFLVNAFKDYGGNDRVLLF 262 E V KD G DRV++ Sbjct: 253 EESGFKDVEIIKDLAGIDRVIIA 275 >gi|254420535|ref|ZP_05034259.1| ribosomal protein L11 methyltransferase [Brevundimonas sp. BAL3] gi|196186712|gb|EDX81688.1| ribosomal protein L11 methyltransferase [Brevundimonas sp. BAL3] Length = 304 Score = 295 bits (755), Expect = 6e-78, Method: Composition-based stats. Identities = 99/256 (38%), Positives = 143/256 (55%), Gaps = 5/256 (1%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L G S ++ DP V+ Q I R LK E + RI+G + F+ + L Sbjct: 39 DARLLLEAAAGASRMDILTDPYRVVTPEQHTAYEAMIDRRLKREPVSRIVGKKGFWKIML 98 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 ++ D PRP+TE L+D A+ + +DLGTG+GA+ LALL E P GV Sbjct: 99 NVTPDVLSPRPDTETLMDVAML----AFARTQAFSAIDLGTGSGAILLALLAERPAAHGV 154 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLG 184 G DIS +AL +AK NA +++R L+++W + + FD+++SNPPYI + + L Sbjct: 155 GTDISTEALAVAKENAANLDLNDRAAFLRTEWAAGFGDASFDLVLSNPPYIPTDHIPTLD 214 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 EVRD DP ++LDGG DGL YR +A V R L G+ +VEIG++Q V +FE++ Sbjct: 215 PEVRDHDPHLALDGGPDGLQAYRDLAPEVKRILKPGGVFAVEIGWDQGPQVKALFEAQGF 274 Query: 245 FLVNAFKDYGGNDRVL 260 V KD G DRV+ Sbjct: 275 ADVKVVKDLGERDRVV 290 >gi|300716407|ref|YP_003741210.1| protein methyltransferase [Erwinia billingiae Eb661] gi|299062243|emb|CAX59360.1| Protein methyltransferase [Erwinia billingiae Eb661] Length = 276 Score = 294 bits (754), Expect = 7e-78, Method: Composition-based stats. Identities = 96/263 (36%), Positives = 135/263 (51%), Gaps = 8/263 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 RD+ L VTG S +I DS L Q L + + R E + + G R+F++ Sbjct: 20 PKRDAEILLGFVTGKSRSWIIAFDDSELSAEQLSQLDDLLARRANGEPVAYLTGQREFWS 79 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L++S DT PRP+TELLV+ ALA +LDLGTGTGA+ LA+ E P Sbjct: 80 LSLSVSPDTLIPRPDTELLVEQALAHL-----PETASTVLDLGTGTGAIALAIASERPDC 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181 + GVD A+ +A+SNA G++ S+WFS+V G F +IVSNPPYI++ Sbjct: 135 QVTGVDRIAAAVSLAESNAQRLGIT-NARFRLSNWFSAVSGEQFTLIVSNPPYIDAEDQH 193 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P +L +GL+ + IA +L G +E G+ Q V I + Sbjct: 194 LQQGDVR-FEPDSALIAADNGLADIKQIAAEAGHYLLPGGWLLLEHGWQQAEAVRAILQQ 252 Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264 V KDYGGNDRV + Sbjct: 253 NHFVSVATAKDYGGNDRVTYAQK 275 >gi|197301353|ref|ZP_03166434.1| hypothetical protein RUMLAC_00080 [Ruminococcus lactaris ATCC 29176] gi|197299510|gb|EDY34029.1| hypothetical protein RUMLAC_00080 [Ruminococcus lactaris ATCC 29176] Length = 306 Score = 294 bits (753), Expect = 9e-78, Method: Composition-based stats. Identities = 89/268 (33%), Positives = 136/268 (50%), Gaps = 9/268 (3%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 +A D+ L VTG+ ++PD ++ + +H + I G ++F Sbjct: 33 EAGLDAWYLLEFVTGVDKAHYYMNPDRRMEQSVAQEYEKVVKLRTEHIPLQHITGVQEFM 92 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPR--IEKRDVVRILDLGTGTGAVCLAL---- 115 + +S D PR +TE+LV+ AL ++++ VR+LDL TG+G + +++ Sbjct: 93 GLEFQVSGDVLIPRQDTEVLVEEALKLLEQEKVPKEKETVRMLDLCTGSGCILISILYYA 152 Query: 116 LKESPFFKGVGVDISCKALEIAKSNA---VTNGVSERFDTLQSDWFSSVEGLFDVIVSNP 172 KE +G G DIS AL IA+ N NG + L+SD F V+G F +IVSNP Sbjct: 153 AKEKIQIQGTGADISEAALRIAEENLDLLEKNGNKGMAELLESDLFEQVDGTFGMIVSNP 212 Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232 PYI++ ++ L EVR DP ++LDG DGL YR I + +L K+G+ EIGY+Q Sbjct: 213 PYIKTSVISGLQEEVRLHDPFLALDGKEDGLFFYRKIIEESRAYLQKNGVLLFEIGYDQG 272 Query: 233 VDVVRIFESRKLFLVNAFKDYGGNDRVL 260 V + V KD G DR++ Sbjct: 273 EAVSELMTKEGYGQVVVKKDLAGLDRIV 300 >gi|22126174|ref|NP_669597.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Yersinia pestis KIM 10] gi|45441670|ref|NP_993209.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Yersinia pestis biovar Microtus str. 91001] gi|108807398|ref|YP_651314.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Yersinia pestis Antiqua] gi|108811663|ref|YP_647430.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Yersinia pestis Nepal516] gi|145598395|ref|YP_001162471.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Yersinia pestis Pestoides F] gi|149366050|ref|ZP_01888085.1| release factors RF-1 and RF-2 N5-glutamine methyltransferase [Yersinia pestis CA88-4125] gi|162418925|ref|YP_001606877.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Yersinia pestis Angola] gi|165926407|ref|ZP_02222239.1| methyltransferase, HemK family [Yersinia pestis biovar Orientalis str. F1991016] gi|165938832|ref|ZP_02227386.1| methyltransferase, HemK family [Yersinia pestis biovar Orientalis str. IP275] gi|166009186|ref|ZP_02230084.1| methyltransferase, HemK family [Yersinia pestis biovar Antiqua str. E1979001] gi|166211074|ref|ZP_02237109.1| methyltransferase, HemK family [Yersinia pestis biovar Antiqua str. B42003004] gi|167401386|ref|ZP_02306883.1| methyltransferase, HemK family [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167419945|ref|ZP_02311698.1| methyltransferase, HemK family [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167424706|ref|ZP_02316459.1| methyltransferase, HemK family [Yersinia pestis biovar Mediaevalis str. K1973002] gi|218929129|ref|YP_002347004.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Yersinia pestis CO92] gi|229894729|ref|ZP_04509909.1| release factors RF-1 and RF-2 N5-glutamine methyltransferase [Yersinia pestis Pestoides A] gi|229897429|ref|ZP_04512585.1| release factors RF-1 and RF-2 N5-glutamine methyltransferase [Yersinia pestis biovar Orientalis str. PEXU2] gi|229898072|ref|ZP_04513223.1| release factors RF-1 and RF-2 N5-glutamine methyltransferase [Yersinia pestis biovar Orientalis str. India 195] gi|229901941|ref|ZP_04517062.1| release factors RF-1 and RF-2 N5-glutamine methyltransferase [Yersinia pestis Nepal516] gi|270490876|ref|ZP_06207950.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Yersinia pestis KIM D27] gi|294503911|ref|YP_003567973.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Yersinia pestis Z176003] gi|21959138|gb|AAM85848.1|AE013831_11 possible protoporphyrinogen oxidase [Yersinia pestis KIM 10] gi|45436532|gb|AAS62086.1| putative protoporphyrinogen oxidase [Yersinia pestis biovar Microtus str. 91001] gi|108775311|gb|ABG17830.1| protoporphyrinogen oxidase [Yersinia pestis Nepal516] gi|108779311|gb|ABG13369.1| putative protoporphyrinogen oxidase [Yersinia pestis Antiqua] gi|115347740|emb|CAL20655.1| putative protoporphyrinogen oxidase [Yersinia pestis CO92] gi|145210091|gb|ABP39498.1| protoporphyrinogen oxidase [Yersinia pestis Pestoides F] gi|149292463|gb|EDM42537.1| release factors RF-1 and RF-2 N5-glutamine methyltransferase [Yersinia pestis CA88-4125] gi|162351740|gb|ABX85688.1| methyltransferase, HemK family [Yersinia pestis Angola] gi|165913195|gb|EDR31818.1| methyltransferase, HemK family [Yersinia pestis biovar Orientalis str. IP275] gi|165921628|gb|EDR38825.1| methyltransferase, HemK family [Yersinia pestis biovar Orientalis str. F1991016] gi|165991741|gb|EDR44042.1| methyltransferase, HemK family [Yersinia pestis biovar Antiqua str. E1979001] gi|166208254|gb|EDR52734.1| methyltransferase, HemK family [Yersinia pestis biovar Antiqua str. B42003004] gi|166961640|gb|EDR57661.1| methyltransferase, HemK family [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167049082|gb|EDR60490.1| methyltransferase, HemK family [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167056588|gb|EDR66357.1| methyltransferase, HemK family [Yersinia pestis biovar Mediaevalis str. K1973002] gi|229680837|gb|EEO76932.1| release factors RF-1 and RF-2 N5-glutamine methyltransferase [Yersinia pestis Nepal516] gi|229689113|gb|EEO81178.1| release factors RF-1 and RF-2 N5-glutamine methyltransferase [Yersinia pestis biovar Orientalis str. India 195] gi|229693766|gb|EEO83815.1| release factors RF-1 and RF-2 N5-glutamine methyltransferase [Yersinia pestis biovar Orientalis str. PEXU2] gi|229702202|gb|EEO90221.1| release factors RF-1 and RF-2 N5-glutamine methyltransferase [Yersinia pestis Pestoides A] gi|262361968|gb|ACY58689.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Yersinia pestis D106004] gi|262365893|gb|ACY62450.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Yersinia pestis D182038] gi|270339380|gb|EFA50157.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Yersinia pestis KIM D27] gi|294354370|gb|ADE64711.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Yersinia pestis Z176003] gi|320015304|gb|ADV98875.1| release factors RF-1 and RF-2 N5-glutamine methyltransferase [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 276 Score = 294 bits (753), Expect = 9e-78, Method: Composition-based stats. Identities = 86/261 (32%), Positives = 130/261 (49%), Gaps = 7/261 (2%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 RD+ L VTG + ++ ++ + Q +L R + E I ++G R+F++ Sbjct: 20 PKRDAEILLSFVTGKARTYLLAFGETEITAEQLLWLETLANRREQGEPIAYLVGEREFWS 79 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L++SS T PRP+TE LV+ ALA RILDLGTGTGA+ LAL E Sbjct: 80 LPLSVSSATLIPRPDTECLVEQALARL-----PAMPCRILDLGTGTGAIALALATERRDC 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182 + VDI+ A+ +A+ NA + + LQ WF V G F +I SNPPYI++ Sbjct: 135 AVIAVDINADAVALARHNAEKLTI-DNVCFLQGSWFEPVSGRFALIASNPPYIDANDPHL 193 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 +VR ++P +L +G++ I +L+ G +E G+ Q V + ++ Sbjct: 194 NEGDVR-YEPHSALVAAAEGMADLAAIVSQAPGYLDPGGWLMLEHGWQQANAVQELLKNS 252 Query: 243 KLFLVNAFKDYGGNDRVLLFC 263 V KDYG NDRV L Sbjct: 253 GFSAVMTCKDYGNNDRVTLGQ 273 >gi|161503113|ref|YP_001570225.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160864460|gb|ABX21083.1| hypothetical protein SARI_01178 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 277 Score = 294 bits (753), Expect = 9e-78, Method: Composition-based stats. Identities = 90/259 (34%), Positives = 126/259 (48%), Gaps = 8/259 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 RD+ L VTG ++ ++ L Q+ L + R + E I + G R+F++ Sbjct: 20 PRRDAEILLEHVTGKGRTYIMAFGETPLAATQQQQLAELLRRRKQGEPIAHLTGIREFWS 79 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +S T PRP+TE LV+ ALA RILDLGTGTGA+ LAL E P Sbjct: 80 LPLFVSPATLIPRPDTECLVEQALARL-----PVKTCRILDLGTGTGAIALALASERPDC 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181 VD A+ +A NA + LQS WFS++ G FD+IVSNPPYI++ Sbjct: 135 DVTAVDRMPDAVALAIRNAEHLAIR-NVRILQSCWFSALPGQQFDMIVSNPPYIDARDPH 193 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P +L +G++ I D + L G +E G+ Q V F Sbjct: 194 LSEGDVR-FEPLSALVADENGMADITHIIDHARQVLTPGGWLLLEHGWQQGEAVRATFRR 252 Query: 242 RKLFLVNAFKDYGGNDRVL 260 V +DYGGN+RV Sbjct: 253 ADYTDVETCRDYGGNERVT 271 >gi|183598964|ref|ZP_02960457.1| hypothetical protein PROSTU_02408 [Providencia stuartii ATCC 25827] gi|188021180|gb|EDU59220.1| hypothetical protein PROSTU_02408 [Providencia stuartii ATCC 25827] Length = 281 Score = 294 bits (753), Expect = 9e-78, Method: Composition-based stats. Identities = 90/262 (34%), Positives = 130/262 (49%), Gaps = 8/262 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A RD+ L +TG S + ++ L + L + + R + E I I+G R+F++ Sbjct: 20 AKRDAEILLQHITGRSRTFIFAFAETELTQPEYEALESLLCRREQGEPIAYIIGEREFWS 79 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +S T PRP+TE LV+ ALA +ILDLGTGTGA+ LA+ E P Sbjct: 80 LPLFVSPATLIPRPDTECLVEQALARL-----PAQRCQILDLGTGTGAIALAIASERPDS 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181 +G+D + A+ +A+ N + LQSDWF+S+ FD+IVSNPPYI+ Sbjct: 135 VIIGIDFNLDAVSLAQRNQQRLAL-NNVQFLQSDWFTSLSCQHFDMIVSNPPYIDGNDDH 193 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P +L GLS I +LN G VE G+ Q V +F+ Sbjct: 194 LQQGDVR-FEPLTALVADNHGLSDLDHIVSTSRSYLNPQGWLLVEHGWQQGAAVRELFKQ 252 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 + DYGG DR+ L Sbjct: 253 YGYSNIETCLDYGGRDRISLGQ 274 >gi|157964997|ref|YP_001499821.1| bifunctional N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase/tRNA (m7G46) methyltransferase [Rickettsia massiliae MTU5] gi|157844773|gb|ABV85274.1| Methylase of polypeptide chain release factors [Rickettsia massiliae MTU5] Length = 511 Score = 294 bits (753), Expect = 1e-77, Method: Composition-based stats. Identities = 87/270 (32%), Positives = 137/270 (50%), Gaps = 10/270 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 ++ L V ++++ D L++ + + R LKHE I I G ++FY+ Sbjct: 24 PQLEARILLQHVINKPIEYLLINLDEQLNEAEIEAFEKLLERRLKHEPIVYITGVKEFYS 83 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV--------VRILDLGTGTGAVCLA 114 ++ PR +TE+LVD PR D+ + IL+LGTG+G + ++ Sbjct: 84 REFIVNKHVLIPRSDTEVLVDVVFQCH-PRFRGDDISENCNDKFLNILELGTGSGCIAIS 142 Query: 115 LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPP 173 LL E P + DIS A+EI KSNA V++R + S+WF ++E FD IVSNPP Sbjct: 143 LLCELPNANVIATDISLDAIEIIKSNAAKYSVTDRIQIIHSNWFENIETQKFDFIVSNPP 202 Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233 YI + +E +++P I+L DGL Y IA+ + L +G +EIG+ Q+ Sbjct: 203 YIAHSEKSEMAIETINYEPSIALFAEKDGLHAYFLIAENAKQFLKPNGKIILEIGFKQEE 262 Query: 234 DVVRIFESRKLFLVNAFKDYGGNDRVLLFC 263 V +IF + + +KD G+ RV+LF Sbjct: 263 AVTQIFLDHGYNIESVYKDLQGHSRVILFT 292 >gi|90581728|ref|ZP_01237515.1| putative HemK protein, Methylase of polypeptide chain release factors [Vibrio angustum S14] gi|90437082|gb|EAS62286.1| putative HemK protein, Methylase of polypeptide chain release factors [Vibrio angustum S14] Length = 284 Score = 293 bits (752), Expect = 1e-77, Method: Composition-based stats. Identities = 87/263 (33%), Positives = 132/263 (50%), Gaps = 9/263 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 DS LC V ++ P+ LDD Q + R L E I I+G R+F++ Sbjct: 24 PQLDSAVLLCHVLDKPRSYLLTWPEKQLDDEQYNIFQQLLARRLNGEPIAYIVGEREFWS 83 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +S T PRP+TE LV+ AL ++LDLGTGTGA+ LA+ E P Sbjct: 84 LPLKVSPSTLIPRPDTERLVELALDKITSA-----TTKVLDLGTGTGAIALAIASECPSV 138 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIESVIV 180 + G+D+ +A E+A N+ + L W+S ++ +F++IVSNPPYI+ Sbjct: 139 QVTGIDLRQEAAELAHENSQRLSILNT-RFLAGSWYSPLQNNDVFELIVSNPPYIDHADP 197 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 + +VR F+P+ +L +GL+ R I+ +HL G +E G+ Q + V I E Sbjct: 198 HLVQGDVR-FEPKSALVADDNGLADIRIISAQGRKHLTVGGWLLMEHGFEQGLAVRTILE 256 Query: 241 SRKLFLVNAFKDYGGNDRVLLFC 263 V+ +DY G DRV + C Sbjct: 257 QLGYQQVSTSQDYAGLDRVTMGC 279 >gi|262274707|ref|ZP_06052518.1| Polypeptide chain release factor methylase [Grimontia hollisae CIP 101886] gi|262221270|gb|EEY72584.1| Polypeptide chain release factor methylase [Grimontia hollisae CIP 101886] Length = 281 Score = 293 bits (752), Expect = 1e-77, Method: Composition-based stats. Identities = 89/264 (33%), Positives = 128/264 (48%), Gaps = 8/264 (3%) Query: 1 MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60 + D+ LC V S + D L + + + R E + I+G+RDF Sbjct: 22 LSPRIDASVLLCHVLDKPSSYLYTWSDKALTEDEEAAFNTLLARRKTGEPVAYIIGYRDF 81 Query: 61 YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120 +++RL + T PRP+TE LV+ AL R+ + D +LDLGTGTGA+ LA+ E Sbjct: 82 WSLRLNVEPSTLIPRPDTERLVELALE----RLPQGDGA-VLDLGTGTGAIALAIASERK 136 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVI 179 GVD+ +A+ +A N + NG+ +QS WFS+V F +IVSNPPYI+ Sbjct: 137 DIAVTGVDLRAEAVALAMKNGLENGI-NNAQFMQSSWFSNVPAQRFSMIVSNPPYIDPED 195 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 +VR F+P+ +L G GL+ R I +L G +E GY+Q V +F Sbjct: 196 PHLSQGDVR-FEPKSALVSGEHGLADIRVICQQSPEYLVDGGWLLIEHGYDQGEAVRTLF 254 Query: 240 ESRKLFLVNAFKDYGGNDRVLLFC 263 V DY G DRV L Sbjct: 255 CGAGFIDVETQHDYAGLDRVTLGR 278 >gi|290475216|ref|YP_003468102.1| N5-glutamine methyltransferase, modifies release factors RF-1 and RF-2 [Xenorhabdus bovienii SS-2004] gi|289174535|emb|CBJ81329.1| N5-glutamine methyltransferase, modifies release factors RF-1 and RF-2 [Xenorhabdus bovienii SS-2004] Length = 286 Score = 293 bits (752), Expect = 1e-77, Method: Composition-based stats. Identities = 86/265 (32%), Positives = 138/265 (52%), Gaps = 10/265 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 RD+ L VTG S +I ++++ + L + + R ++ E + I+G R+F++ Sbjct: 20 PKRDAEILLGYVTGRSRTYLIAFDETLISSEELHQLDSLLGRRIQGEPVAYIIGEREFWS 79 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + +S T PRP+TE LV+ AL + RILDLGTGTGA+ LAL E Sbjct: 80 LPFAVSPATLIPRPDTECLVEKALE-----LLPDSPARILDLGTGTGAIALALASERNDC 134 Query: 123 KGVGVDISCKALEIAKSNAVTNG---VSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESV 178 GVDI+ A+ +A+ NA N + LQS+WF++V FD+IVSNPPYI+ Sbjct: 135 YVTGVDINSDAVMLAQYNAEKNAGKLAIHNVNFLQSEWFAAVGNQQFDMIVSNPPYIDEC 194 Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238 ++R F+P +L +G++ + I L+ +G +E G+ Q + V + Sbjct: 195 DPHLQEGDIR-FEPATALIAAQNGMADLQAIVGQARHFLSPNGWLLLEHGWKQGIVVRNL 253 Query: 239 FESRKLFLVNAFKDYGGNDRVLLFC 263 F + + F+DYGGN+R+ + Sbjct: 254 FLEKGYQQIATFQDYGGNERITIGR 278 >gi|332306090|ref|YP_004433941.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Glaciecola agarilytica 4H-3-7+YE-5] gi|332173419|gb|AEE22673.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Glaciecola agarilytica 4H-3-7+YE-5] Length = 287 Score = 293 bits (752), Expect = 1e-77, Method: Composition-based stats. Identities = 90/262 (34%), Positives = 134/262 (51%), Gaps = 8/262 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A DS +C+V ++ ++ P+ LD Q + + + + + +LG+RDF++ Sbjct: 30 AATDSRLLMCQVLQCNTVYLMTWPEKPLDAAQLRAFEHLVEKRKQGHPVAYLLGYRDFWS 89 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 +RL +S T PRPETELLV++AL + + +LDLGTGTGA+ LAL E P + Sbjct: 90 LRLQVSPATLIPRPETELLVETALD-----LPLNNEANVLDLGTGTGAIALALASEKPDW 144 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181 + G+D + A+ +AK N N + QSDWFS++ FD+IVSNPPY+E V Sbjct: 145 QVAGIDKNADAVALAKQNGQANKLPH-VRFTQSDWFSNLSAASFDLIVSNPPYVEQSSVY 203 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P +L G DGL R I +L + E G+ Q V + Sbjct: 204 LQQGDVR-FEPASALTSGEDGLDDIRFIIPNAIEYLAPNAWLVFEHGHLQAQGVQALLRE 262 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 V + D G+ RV L C Sbjct: 263 NSFEQVRSVSDLNGHPRVTLGC 284 >gi|51596332|ref|YP_070523.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Yersinia pseudotuberculosis IP 32953] gi|170024409|ref|YP_001720914.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Yersinia pseudotuberculosis YPIII] gi|186895375|ref|YP_001872487.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Yersinia pseudotuberculosis PB1/+] gi|51589614|emb|CAH21244.1| putative protoporphyrinogen oxidase [Yersinia pseudotuberculosis IP 32953] gi|169750943|gb|ACA68461.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Yersinia pseudotuberculosis YPIII] gi|186698401|gb|ACC89030.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Yersinia pseudotuberculosis PB1/+] Length = 276 Score = 293 bits (752), Expect = 1e-77, Method: Composition-based stats. Identities = 86/261 (32%), Positives = 128/261 (49%), Gaps = 7/261 (2%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 RD+ L VTG + ++ ++ + Q +L R + E I ++G R+F++ Sbjct: 20 PKRDAEILLSFVTGKARTYLLAFGETEITAEQLLWLETLANRREQGEPIAYLVGEREFWS 79 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L++SS T PRP+TE LV+ ALA RILDLGTGTGA+ LAL E Sbjct: 80 LPLSVSSATLIPRPDTECLVEQALARL-----PSMPCRILDLGTGTGAIALALASERRDC 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182 + VDI+ A+ +A+ NA + + LQ WF V G F +I SNPPYI++ Sbjct: 135 AVIAVDINADAVALARHNAKKLAI-DNVCFLQGSWFEPVSGRFALIASNPPYIDANDPHL 193 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 +VR ++P +L +G++ I +L G +E G+ Q V ++ Sbjct: 194 NEGDVR-YEPHSALVAAAEGMADLAAIVSQAPGYLEPGGWLMLEHGWQQANAVQERLKNS 252 Query: 243 KLFLVNAFKDYGGNDRVLLFC 263 V KDYG NDRV L Sbjct: 253 GFSAVMTCKDYGNNDRVTLGQ 273 >gi|268592709|ref|ZP_06126930.1| protein-(glutamine-N5) methyltransferase [Providencia rettgeri DSM 1131] gi|291311852|gb|EFE52305.1| protein-(glutamine-N5) methyltransferase [Providencia rettgeri DSM 1131] Length = 277 Score = 293 bits (752), Expect = 1e-77, Method: Composition-based stats. Identities = 85/262 (32%), Positives = 133/262 (50%), Gaps = 8/262 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A RD+ L VTG S + ++ L + + R K E I I+G R+F++ Sbjct: 20 AKRDAEILLEHVTGRSRTYLFAFGETELKAEEFQQAELLLQRREKGEPIAYIIGEREFWS 79 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +S T PRP+TE +V+ AL+ + + ILDLGTGTGA+ LAL E Sbjct: 80 LPLYVSPATLIPRPDTECIVEQALSRLTEQKNQ-----ILDLGTGTGAIALALASEMQQS 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVD 181 + +GVD + A+ +A+ N +S +QS+WFSS+ FD+I+SNPPYI+ + Sbjct: 135 QVIGVDFNPDAVALAQRNQQRLNIS-NVKFIQSNWFSSLSIQQFDMIISNPPYIDENDMH 193 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P +L +GL+ I ++L G +E G+ Q + V +F+ Sbjct: 194 LSEGDVR-FEPLTALVAKDEGLADLMHIIKESKKYLKNQGWLLLEHGWTQGLAVRDLFKV 252 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 + DYGG +R+ L Sbjct: 253 HGYTKIETCLDYGGRERISLGQ 274 >gi|256821857|ref|YP_003145820.1| HemK family modification methylase [Kangiella koreensis DSM 16069] gi|256795396|gb|ACV26052.1| modification methylase, HemK family [Kangiella koreensis DSM 16069] Length = 286 Score = 293 bits (751), Expect = 1e-77, Method: Composition-based stats. Identities = 84/262 (32%), Positives = 129/262 (49%), Gaps = 9/262 (3%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 +A D+ L + + P+ +L + Q+ + I R + E I+G ++F+ Sbjct: 28 EAALDAEILLAFAIDKNRTWLKTWPEYLLSEDQKSCFEDFISRRRQGEPTAYIIGEQEFW 87 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 ++ L ++ DT PRPETE+LV+ AL RI + I+DLGTG+GA+ LA+ E P Sbjct: 88 SLTLNVTRDTLIPRPETEMLVEQALL----RIPSDESYSIVDLGTGSGAIALAIASERPQ 143 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS-VEGLFDVIVSNPPYIESVIV 180 +D+S AL++A++NA +N + + Q W S+ + G D+IVSNPPY+ Sbjct: 144 ATVWALDMSELALKVAQANAESNQI-DNVTFEQGSWLSNWLHGKLDMIVSNPPYVAPNDP 202 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 ++P +L GLS R I + HL DG E GY+Q V I + Sbjct: 203 HLAD---LVYEPVTALVAEDKGLSDIRQITQQATEHLKPDGYLLFEHGYDQGQAVREILQ 259 Query: 241 SRKLFLVNAFKDYGGNDRVLLF 262 + KDY G DRV L Sbjct: 260 QTGFEQIETIKDYAGLDRVTLG 281 >gi|319897177|ref|YP_004135372.1| n5-glutamine methyltransferase, modifies release factors rf-1 and rf-2 [Haemophilus influenzae F3031] gi|317432681|emb|CBY81044.1| N5-glutamine methyltransferase, modifies release factors RF-1 and RF-2 [Haemophilus influenzae F3031] Length = 292 Score = 293 bits (751), Expect = 2e-77, Method: Composition-based stats. Identities = 98/270 (36%), Positives = 149/270 (55%), Gaps = 12/270 (4%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 + D+ L TG S Q++ D+ +D++ R L + R LK E I ILG ++F+ Sbjct: 22 NSKIDALVLLQHATGKSRTQILAFDDTEIDEKVRLKLIALLDRRLKGEPIAYILGEKEFW 81 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALLKESP 120 ++ L +S T PRP+TE+LV+ AL +L ++E+ RILDLGTGTGA+ LAL E Sbjct: 82 SLPLNVSKSTLIPRPDTEILVEKALQIALEKLEENPPHFRILDLGTGTGAIALALASELS 141 Query: 121 FF--------KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNP 172 + +GVD+ + +A+SNA N + + LQS WF ++ G FD+IVSNP Sbjct: 142 SICQKRLISLEIIGVDLMPDVVALAQSNAERNQL--NVEFLQSCWFDNITGKFDLIVSNP 199 Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232 PYI++ +VR F+P +L +G + R I + S +LN +G+ +E G+ Q Sbjct: 200 PYIDAQDEHLHQGDVR-FEPLSALVANDEGYADLRHIIELASSYLNSNGVLLLEHGWQQG 258 Query: 233 VDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262 V IF+ +V +DYG N+RV L Sbjct: 259 EKVRSIFQENHWEMVETVRDYGDNERVTLG 288 >gi|77360002|ref|YP_339577.1| N5-glutamine methyltransferase, modifies release factors RF-1 and RF-2 [Pseudoalteromonas haloplanktis TAC125] gi|76874913|emb|CAI86134.1| N5-glutamine methyltransferase, modifies release factors RF-1 and RF-2 [Pseudoalteromonas haloplanktis TAC125] Length = 279 Score = 293 bits (751), Expect = 2e-77, Method: Composition-based stats. Identities = 85/262 (32%), Positives = 128/262 (48%), Gaps = 8/262 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A D+ L + + P+S L Q+ R L E + I+G R+F++ Sbjct: 23 AKLDAQVLLLHILQKPHSYLFTWPESTLSTEQQQQFDTFCQRRLNGEPVAHIIGQREFWS 82 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +++ T PRP+TE LV+ AL ++P ++LDLGTGTGA+ LAL E P + Sbjct: 83 LSLEVNATTLIPRPDTETLVEQALEMAVP-----SNAKVLDLGTGTGAIALALGSEMPTW 137 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181 + VD A+ +A N + QS+WFS++ G F +IVSNPPYIE+ + Sbjct: 138 QITAVDRVADAVALATRNQQRLAI-NNVQVKQSNWFSALNGEKFHLIVSNPPYIETTDIH 196 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P +L DGL+ + I +L+ G +E G+ Q V + F Sbjct: 197 LKQGDVR-FEPLSALVADDDGLADIKQIITQSRDYLHAKGYLLIEHGFEQSGAVSQFFAQ 255 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 + KD G NDRV L Sbjct: 256 MGFINIKTVKDLGNNDRVTLAQ 277 >gi|167471071|ref|ZP_02335775.1| methyltransferase, HemK family protein [Yersinia pestis FV-1] Length = 267 Score = 293 bits (751), Expect = 2e-77, Method: Composition-based stats. Identities = 86/261 (32%), Positives = 130/261 (49%), Gaps = 7/261 (2%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 RD+ L VTG + ++ ++ + Q +L R + E I ++G R+F++ Sbjct: 11 PKRDAEILLSFVTGKARTYLLAFGETEITAEQLLWLETLANRREQGEPIAYLVGEREFWS 70 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L++SS T PRP+TE LV+ ALA RILDLGTGTGA+ LAL E Sbjct: 71 LPLSVSSATLIPRPDTECLVEQALARL-----PAMPCRILDLGTGTGAIALALATERRDC 125 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182 + VDI+ A+ +A+ NA + + LQ WF V G F +I SNPPYI++ Sbjct: 126 AVIAVDINADAVALARHNAEKLTI-DNVCFLQGSWFEPVSGRFALIASNPPYIDANDPHL 184 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 +VR ++P +L +G++ I +L+ G +E G+ Q V + ++ Sbjct: 185 NEGDVR-YEPHSALVAAAEGMADLAAIVSQAPGYLDPGGWLMLEHGWQQANAVQELLKNS 243 Query: 243 KLFLVNAFKDYGGNDRVLLFC 263 V KDYG NDRV L Sbjct: 244 GFSAVMTCKDYGNNDRVTLGQ 264 >gi|330445231|ref|ZP_08308883.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328489422|dbj|GAA03380.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 284 Score = 293 bits (751), Expect = 2e-77, Method: Composition-based stats. Identities = 87/263 (33%), Positives = 131/263 (49%), Gaps = 9/263 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 DS LC V ++ P+ LDD Q + R + E + I+G R+F++ Sbjct: 24 PQLDSAVLLCHVLDKPRSYLLTWPEKQLDDAQYEAFQALLTRRINGEPVAYIIGEREFWS 83 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +S T PRP+TE LV+ AL ++LDLGTGTGA+ LA+ E P Sbjct: 84 LSLKVSPSTLIPRPDTERLVELALEKI-----SASATKVLDLGTGTGAIALAIASECPML 138 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIV 180 + G+D+ +A ++A N+ +S L W+S ++ FDVIVSNPPYI+ Sbjct: 139 QVTGIDLRQEAADLALENSQRLSISNT-RFLAGSWYSPLQQNETFDVIVSNPPYIDEADP 197 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 + +VR F+P+ +L +GL+ R I+D +HL G +E G+ Q V I Sbjct: 198 HLVQGDVR-FEPKSALVADDNGLADIRIISDQGRQHLAIGGWLLMEHGFEQGSAVREILA 256 Query: 241 SRKLFLVNAFKDYGGNDRVLLFC 263 V+ +DY G DRV + C Sbjct: 257 QLGYQQVSTSQDYAGLDRVTMGC 279 >gi|197335225|ref|YP_002155530.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Vibrio fischeri MJ11] gi|197316715|gb|ACH66162.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Vibrio fischeri MJ11] Length = 284 Score = 293 bits (750), Expect = 2e-77, Method: Composition-based stats. Identities = 88/260 (33%), Positives = 126/260 (48%), Gaps = 9/260 (3%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ LC V ++ P+ ++ D + + R L E I I+G+R+F+++ L Sbjct: 27 DAAVLLCHVLDKPRSYLLTWPEKIVSDEELGNFNALLERRLAGEPIAYIVGYREFWSLPL 86 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 +S T PRP+TE LV+ AL P + ILDLGTGTGA+ LA+ E P + Sbjct: 87 KVSPTTLIPRPDTERLVEVALDHLTPNAQS-----ILDLGTGTGAIALAIASEMPTLNVI 141 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS--VEGLFDVIVSNPPYIESVIVDCL 183 GVD A+E+AK NA N + + Q WF + FD+IVSNPPYI+ Sbjct: 142 GVDYQDDAVELAKENAKINHI-NNVEFRQGSWFEPISLSDKFDIIVSNPPYIDGNDPHLS 200 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 +VR F+P+ +L +G S I +L G +E G+ Q + FE Sbjct: 201 EGDVR-FEPQTALVAEQNGFSDLIHIMQHGREYLLNGGWLMMEHGFEQGEQLRHFFEEHG 259 Query: 244 LFLVNAFKDYGGNDRVLLFC 263 V +DY GNDRV L Sbjct: 260 YINVKTEQDYTGNDRVTLGQ 279 >gi|148266071|ref|YP_001232777.1| HemK family modification methylase [Geobacter uraniireducens Rf4] gi|146399571|gb|ABQ28204.1| [protein release factor]-glutamine N5-methyltransferase [Geobacter uraniireducens Rf4] Length = 284 Score = 293 bits (750), Expect = 2e-77, Method: Composition-based stats. Identities = 89/260 (34%), Positives = 127/260 (48%), Gaps = 9/260 (3%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 A +S LC V GL + V+ D L + + + R K E + ILG ++F Sbjct: 28 NARLESEWMLCAVLGLDRVGLYVNFDKPLTEAELSGYRGMVTRRSKREPLQYILGSQEFM 87 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 + +S PR +TE+LV A A + RILD+G G+G V +AL K P Sbjct: 88 GLEFEVSPAVLIPRHDTEVLVAEAAA------RCGEHCRILDIGVGSGCVSVALAKALPT 141 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIV 180 +GVD S +AL +A+ NA GV+ + F + FD+IVSNPPYI + + Sbjct: 142 ATILGVDSSPQALVLAQKNADKQGVT--VSLFEGSLFEPFQDQRFDLIVSNPPYIPTDDL 199 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 L EVRD++P +LDGG DGL YR I S +LN G E+G Q V+ + + Sbjct: 200 KTLQPEVRDYEPIQALDGGADGLDFYRLIVPAASDYLNPGGWLLFEVGVGQAEAVLGLLD 259 Query: 241 SRKLFLVNAFKDYGGNDRVL 260 + KD G +RV+ Sbjct: 260 KTGFGELFTAKDPNGIERVV 279 >gi|271500558|ref|YP_003333583.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Dickeya dadantii Ech586] gi|270344113|gb|ACZ76878.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Dickeya dadantii Ech586] Length = 282 Score = 293 bits (750), Expect = 2e-77, Method: Composition-based stats. Identities = 89/262 (33%), Positives = 130/262 (49%), Gaps = 8/262 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 RD+ L VT ++ ++ L D + L + + R + E I ++G+R+F++ Sbjct: 20 PKRDAEILLEHVTDKRRTFLLAFGETELTDDEVLALESLLARRVNGEPIAYLVGYREFWS 79 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +S T PRP+TE LV+ ALA +LDLGTGTGA+ LA+ E P Sbjct: 80 LPLAVSPATLIPRPDTECLVEQALAVL-----PDGASSVLDLGTGTGAIALAIAHERPDC 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181 + VG+D A+ +A NA G+ L DWFS + G F VIVSNPPYI+ Sbjct: 135 QVVGIDRQPDAVALASQNARRLGI-HNARFLPGDWFSPLAGQRFAVIVSNPPYIDEHDPH 193 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 L +VR F+P +L G GL+ + I L DG +E G+ Q V + Sbjct: 194 LLRGDVR-FEPASALVAGAQGLADLQHIIRQAGDFLLDDGWLLLEHGWQQGEAVRGLLSQ 252 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 + V ++DYG N+RV L Sbjct: 253 QGFVQVKTYRDYGDNERVTLGQ 274 >gi|121601994|ref|YP_988677.1| HemK family methyltransferase [Bartonella bacilliformis KC583] gi|120614171|gb|ABM44772.1| methyltransferase, HemK family [Bartonella bacilliformis KC583] Length = 288 Score = 293 bits (750), Expect = 2e-77, Method: Composition-based stats. Identities = 106/261 (40%), Positives = 150/261 (57%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 +A D+ + VT S+ I+ PD L +Q L AI R + E HRI+G R+FY Sbjct: 24 EANLDTKLLVEWVTSTSTIDRILQPDMCLSSQQIAQLEEAIKRRISGEPTHRIIGTREFY 83 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 + LS +T EPRP+TE+L+D L +++K +LD+GTGTGA+ +A+LK+ Sbjct: 84 GISFALSKETLEPRPDTEILIDLVLPILKKKVKKSGKATLLDMGTGTGAIAIAILKQVVQ 143 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181 V VDI+ AL+ A NA V RF L S+WF++V G FD+I+SNPPYI + Sbjct: 144 TCAVAVDIAEDALKTATQNAKNADVLHRFTPLLSNWFNTVTGQFDLIISNPPYIPEKDIP 203 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 L EVR +DP +L GG DGL YR +AD + +L ++G +VEIGY+QK +V +FE Sbjct: 204 NLAKEVRQYDPLRALIGGKDGLDFYRKLADESATYLKEEGYIAVEIGYSQKKEVCNLFEK 263 Query: 242 RKLFLVNAFKDYGGNDRVLLF 262 + D G R +LF Sbjct: 264 NGFKCLKIRDDLSGIPRAILF 284 >gi|212711978|ref|ZP_03320106.1| hypothetical protein PROVALCAL_03054 [Providencia alcalifaciens DSM 30120] gi|212685500|gb|EEB45028.1| hypothetical protein PROVALCAL_03054 [Providencia alcalifaciens DSM 30120] Length = 277 Score = 292 bits (749), Expect = 3e-77, Method: Composition-based stats. Identities = 94/262 (35%), Positives = 135/262 (51%), Gaps = 8/262 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A RD+ L TG S ++ ++ L ++ L ++R + E I I+G R+F++ Sbjct: 20 AKRDAQILLQYTTGRSRTYILAFDETELTSDEQTQLDALLMRREQGEPIAYIVGEREFWS 79 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +S T PRP+TE LV+ AL LP E RILDLGTGTGA+ LAL E P Sbjct: 80 LPLYVSPATLIPRPDTECLVEQAL-VRLPNAEC----RILDLGTGTGAIGLALASELPNS 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVD 181 VGVD + +A+ +A+ N + QSDWF+S+ LFD+IVSNPPYI+ + Sbjct: 135 CVVGVDFNPEAVALAQRNQQRLALP-NIQFSQSDWFASLPNELFDMIVSNPPYIDEGDIH 193 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P +L G S I ++L + G +E G+ Q V ++F Sbjct: 194 LSQGDVR-FEPSTALIADNHGFSDLEHIIATSKQYLKQQGWLLLEHGWQQGSTVRKLFNE 252 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 V DYGG +RV L Sbjct: 253 NGYTNVETCLDYGGKERVSLGQ 274 >gi|197284959|ref|YP_002150831.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Proteus mirabilis HI4320] gi|194682446|emb|CAR42348.1| protein methyltransferase (protein-glutamine N-methyltransferase) [Proteus mirabilis HI4320] Length = 282 Score = 292 bits (749), Expect = 3e-77, Method: Composition-based stats. Identities = 89/262 (33%), Positives = 137/262 (52%), Gaps = 8/262 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 RD+ L VT + +I ++VL + ++ L++ + R +K E I ++G R+F++ Sbjct: 20 PKRDAEILLGHVTKRARTYLIAFSETVLLEDEQVQLSSLLARRIKGEPIAYLVGEREFWS 79 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +S T PRP+TE LV+ AL + RILDLGTGTGA+ LA+ E Sbjct: 80 LPLKVSPATLIPRPDTECLVEKALEKLSAQAS-----RILDLGTGTGAIALAIASERSDC 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181 + +GVD +A+ +A NA +S + +S WFSS+ G FD+I+SNPPYI+ Sbjct: 135 RVLGVDFQPEAVALAIENAQHLALS-NVEFTESCWFSSLSGYQFDMIISNPPYIDEEDEH 193 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P +L G + I + L +G +E G+ Q V IF Sbjct: 194 LYQGDVR-FEPLTALVAADHGFADIELIITNARQFLANNGWVLIEHGWQQGERVRNIFID 252 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 + V F+DYGGN+RV + Sbjct: 253 KGYCCVETFRDYGGNERVTVGR 274 >gi|295109134|emb|CBL23087.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Ruminococcus obeum A2-162] Length = 290 Score = 292 bits (749), Expect = 3e-77, Method: Composition-based stats. Identities = 82/272 (30%), Positives = 126/272 (46%), Gaps = 13/272 (4%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 +A D+ L V ++ D +D + + +H + I G F Sbjct: 22 EAGLDAWLLLEYVADINRAWYYAHMDETVDGKTEARYLEMCKKRAQHIPLQHITGRAFFM 81 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 + PR +TE+LV++AL +++ +ILD+ TG+G + L+ L E Sbjct: 82 GYEFFVDERVLVPRQDTEVLVETALT----HLKECRAPKILDMCTGSGCILLSFLMERTD 137 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL---------FDVIVSNP 172 G GVDIS AL +AK N V + +R + +QSD FS +D+++SNP Sbjct: 138 AVGTGVDISEGALAVAKQNRVHLQLEDRAEFVQSDLFSGDYFKKNSGNTVTEYDMLISNP 197 Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232 PYI S + L EVR DP ++LDG DGL YR I ++L G EIG +Q Sbjct: 198 PYIPSGEIPGLMEEVRSHDPVLALDGKEDGLFFYREITAQADKYLRAGGWLMYEIGCDQG 257 Query: 233 VDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 V +I ++ V +D G DRV++ + Sbjct: 258 ESVSKIMKTDNFINVEVIQDLAGLDRVVIGQK 289 >gi|253580115|ref|ZP_04857382.1| modification methylase [Ruminococcus sp. 5_1_39B_FAA] gi|251848634|gb|EES76597.1| modification methylase [Ruminococcus sp. 5_1_39BFAA] Length = 321 Score = 292 bits (748), Expect = 4e-77, Method: Composition-based stats. Identities = 85/294 (28%), Positives = 130/294 (44%), Gaps = 35/294 (11%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 +A D+ L VTG S + + + I R H + + F Sbjct: 24 EAGLDAWLLLEYVTGKSRAYYFAYGEESVTESVAERYLELISRRAGHIPLQHLTHQAFFM 83 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 + + PR +TE LV+SAL ++ ILD+ TG+G + +++LKE Sbjct: 84 GHEFYVDKNVLVPRQDTETLVESALEC----MKAVKNPYILDMCTGSGCILISILKERAD 139 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL----------------- 164 G GVD+S +AL++A NA T V+E + +QS+ FS ++ + Sbjct: 140 AHGTGVDLSDEALKVAVRNARTLEVAEHAEFVQSNLFSEMQNIVYGTEYMKRTAVKDTVK 199 Query: 165 --------------FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210 +D+I+SNPPYI + ++ L EV+ DPR++LDG DGL YR I Sbjct: 200 MTECENSNRNYSRAYDMIISNPPYIPTAEIEDLMDEVKLHDPRMALDGMEDGLYFYRAIT 259 Query: 211 DGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 HL G EIG +Q DV + K + +D G DRV+L + Sbjct: 260 KQAQDHLVPGGWLLYEIGCSQGEDVAALLRKYKFEDIEIRQDLAGLDRVVLGRK 313 >gi|269138758|ref|YP_003295459.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Edwardsiella tarda EIB202] gi|267984419|gb|ACY84248.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Edwardsiella tarda EIB202] gi|304558751|gb|ADM41415.1| hypothetical protein ETAF_1303 [Edwardsiella tarda FL6-60] Length = 279 Score = 292 bits (748), Expect = 4e-77, Method: Composition-based stats. Identities = 88/262 (33%), Positives = 132/262 (50%), Gaps = 8/262 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 RD+ L VTG ++ ++ L Q LT+ + R + E + ++G R+F++ Sbjct: 20 PRRDAEILLEYVTGKGRSFLLAFGETRLTAAQLTQLTSLLARREQGEPVAYLIGEREFWS 79 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +S T PRP+TE LV+ AL +I+DLGTGTGA+ LAL E P Sbjct: 80 LPLAVSPATLIPRPDTECLVEQALMRL-----PAAPAQIVDLGTGTGAIALALASERPDC 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181 + V+ + A+ +A+ NA G+S R + LQ WF+ + G F +IVSNPPYI++ Sbjct: 135 RVSAVEFNPDAVALAQHNAARLGLS-RVEILQGSWFTPLAGRRFTLIVSNPPYIDAADGH 193 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P +L GL+ R IA HL G +E G+ Q V + Sbjct: 194 LSQGDVR-FEPASALVAAEQGLADLRAIARQAPDHLEPGGWLLLEHGWQQGAAVRALLTE 252 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 V + +DYG N+RV L Sbjct: 253 YGFCCVESVRDYGDNERVTLGQ 274 >gi|148826081|ref|YP_001290834.1| hypothetical protein CGSHiEE_05375 [Haemophilus influenzae PittEE] gi|229847125|ref|ZP_04467230.1| HemK [Haemophilus influenzae 7P49H1] gi|148716241|gb|ABQ98451.1| HemK [Haemophilus influenzae PittEE] gi|229809954|gb|EEP45675.1| HemK [Haemophilus influenzae 7P49H1] gi|309973232|gb|ADO96433.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Haemophilus influenzae R2846] Length = 292 Score = 292 bits (748), Expect = 4e-77, Method: Composition-based stats. Identities = 100/270 (37%), Positives = 147/270 (54%), Gaps = 12/270 (4%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 + D+ L VTG S Q++ D+ +D++ R LT + R LK E I ILG ++F+ Sbjct: 22 NSKIDALVLLQHVTGKSRTQILTFDDTEIDEKVRLKLTALLDRRLKGEPIAYILGEKEFW 81 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV-RILDLGTGTGAVCLALLKESP 120 ++ L +S T PRP+TE LV+ AL +L ++E+ RILDLGTGTGA+ LAL E Sbjct: 82 SLPLNVSKGTLIPRPDTESLVEKALQIALEKLEENPPHFRILDLGTGTGAIALALASELA 141 Query: 121 FF--------KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNP 172 + +GVD+ + +A+SNA N + LQS WF ++ G FD+IVSNP Sbjct: 142 PICQKRHIPLEIIGVDLMPDVVALARSNAERNQL--NVQFLQSSWFDNITGKFDLIVSNP 199 Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232 PYI+ +VR F+P +L +G + R I + S +LN +G+ +E G+ Q Sbjct: 200 PYIDVQDEHLHQGDVR-FEPLSALVANDEGYADLRHIIELASSYLNSNGVLLLEHGWQQG 258 Query: 233 VDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262 V IF +V +DYG N+RV L Sbjct: 259 EKVRSIFLENYWEMVETVRDYGDNERVTLG 288 >gi|238919471|ref|YP_002932986.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Edwardsiella ictaluri 93-146] gi|238869040|gb|ACR68751.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Edwardsiella ictaluri 93-146] Length = 279 Score = 292 bits (748), Expect = 4e-77, Method: Composition-based stats. Identities = 88/262 (33%), Positives = 135/262 (51%), Gaps = 8/262 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 RD+ L VTG ++ +++L Q LT+ + R ++ E + ++G R+F++ Sbjct: 20 PRRDAEILLEHVTGRGRSFLLAFGETLLTAAQLAQLTSLLARRVQGEPVAYLIGEREFWS 79 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +S T PRP+TE LV+ AL V+I+DLGTGTGA+ LAL E P Sbjct: 80 LPLAVSPATLIPRPDTECLVEQALLRL-----PATPVQIVDLGTGTGAIALALASERPDC 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181 + V+ + A+ +A+ NA G+S R + LQ WF+ + G F +IVSNPPYI++ Sbjct: 135 QVSAVEFNPDAVALAQHNAARLGLS-RVEILQGSWFTPLAGRRFTLIVSNPPYIDAADGH 193 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P +L GL+ R IA +L G +E G+ Q V + Sbjct: 194 LSQGDVR-FEPASALVAAEQGLADLRAIARQAPDYLALGGWLLLEHGWQQGAAVRALLTE 252 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 V + +DYG N+RV L Sbjct: 253 YGFCRVESVRDYGNNERVTLGQ 274 >gi|268317361|ref|YP_003291080.1| modification methylase, HemK family [Rhodothermus marinus DSM 4252] gi|262334895|gb|ACY48692.1| modification methylase, HemK family [Rhodothermus marinus DSM 4252] Length = 304 Score = 292 bits (748), Expect = 4e-77, Method: Composition-based stats. Identities = 87/266 (32%), Positives = 129/266 (48%), Gaps = 7/266 (2%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 A R++ LC V G S Q+ P+ +D +R + R L+ E + +LG+ +F Sbjct: 36 DARRNAEWMLCEVLGCSRAQLYAYPERPVDAARRARFAELLARRLRREPLQYVLGYVEFL 95 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 +RL + PRPETE L + L ++ R+LD+GTG+G + LA+ Sbjct: 96 GLRLEVGPGVLVPRPETEWLTERVL----QELQSTPGPRVLDVGTGSGCIALAIKHHRSD 151 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESV 178 DIS +AL IA+ NA G+ + D L + +V G FD+IVSNPPY+ Sbjct: 152 ADVWACDISPEALSIARRNAERLGLQVHWVEADVLADSFPENVPGPFDLIVSNPPYLALH 211 Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238 D L EVRD++P ++L G D L YR +A L G + E+ + DVV + Sbjct: 212 EADELPPEVRDYEPPVALYAGEDPLRFYRALARHGHVLLKPGGRLACEVHAHYGTDVVAL 271 Query: 239 FESRKLFLVNAFKDYGGNDRVLLFCR 264 FE+ V D GN R++ R Sbjct: 272 FEACGYEAVRLECDLAGNPRLVWARR 297 >gi|59711376|ref|YP_204152.1| N5-glutamine methyltransferase, modifies release factors RF-1 and RF-2 [Vibrio fischeri ES114] gi|59479477|gb|AAW85264.1| N5-glutamine methyltransferase, modifies release factors RF-1 and RF-2 [Vibrio fischeri ES114] Length = 284 Score = 292 bits (748), Expect = 4e-77, Method: Composition-based stats. Identities = 88/260 (33%), Positives = 126/260 (48%), Gaps = 9/260 (3%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ LC V ++ P+ ++ D + + R L E I I+G+R+F+++ L Sbjct: 27 DAAVLLCHVLDKPRSYLLTWPEKIVSDEELGNFNALLERRLAGEPIAYIVGYREFWSLPL 86 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 +S T PRP+TE LV+ AL P + ILDLGTGTGA+ LA+ E P + Sbjct: 87 KVSPTTLIPRPDTERLVEVALDHLTPNAQS-----ILDLGTGTGAIALAIASEMPTLNVI 141 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS--VEGLFDVIVSNPPYIESVIVDCL 183 GVD A+E+AK NA N + + Q WF + FD+IVSNPPYI+ Sbjct: 142 GVDYQDDAVELAKGNAKINHI-NNVEFRQGSWFEPISLSDKFDIIVSNPPYIDGNDPHLS 200 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 +VR F+P+ +L +G S I +L G +E G+ Q + FE Sbjct: 201 EGDVR-FEPQTALVAEQNGFSDLIHIMQHGREYLLNGGWLMMEHGFEQGEQLRHFFEEHG 259 Query: 244 LFLVNAFKDYGGNDRVLLFC 263 V +DY GNDRV L Sbjct: 260 YINVKTEQDYAGNDRVTLGQ 279 >gi|311693604|gb|ADP96477.1| modification methylase, HemK family [marine bacterium HP15] Length = 283 Score = 292 bits (747), Expect = 4e-77, Method: Composition-based stats. Identities = 90/262 (34%), Positives = 130/262 (49%), Gaps = 9/262 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 D+ L +TGLS P+ + D + + + +LG ++F++ Sbjct: 25 PRLDAELLLSHITGLSRTSFRAWPEREVTDTHAEAFERLVQDRVAGRPVAHLLGHQEFWS 84 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +S+ T PRP+TE LV+ ALA LPR +LDLGTGTGA+ LAL E + Sbjct: 85 LPLKVSASTLIPRPDTECLVEVALALPLPR-----QASVLDLGTGTGAIALALASEHGGW 139 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVD 181 + D +A+ +A+ NAV G+ +QS WFS +E FD+IVSNPPYI Sbjct: 140 RISACDAVPEAVALARENAVALGL--NLSVVQSSWFSGLEPERFDLIVSNPPYIPDSDRH 197 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P +L G DGL R I L + G VE G++Q V ++F + Sbjct: 198 LEEGDVR-FEPASALVSGSDGLDDLRLIISQAPDWLFEGGWLLVEHGFDQAEAVAQLFHA 256 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 R V +DYG DR+ L Sbjct: 257 RGFKAVETRQDYGNRDRMTLGQ 278 >gi|310767483|gb|ADP12433.1| Protein methyltransferase [Erwinia sp. Ejp617] Length = 281 Score = 292 bits (747), Expect = 5e-77, Method: Composition-based stats. Identities = 90/263 (34%), Positives = 135/263 (51%), Gaps = 8/263 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 RD+ L VTG S +I DS LD L + R E I + G R+F++ Sbjct: 20 PKRDAEILLGFVTGKSRAWLIGFDDSELDAVALAQLDALLKRRTAGEPIAYLTGEREFWS 79 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L+++ DT PRP++E+LV+ ALA ILDLGTG+GA+ LAL E P Sbjct: 80 LSLSVTPDTLIPRPDSEVLVEQALAHL-----PVAAGSILDLGTGSGAIALALASERPDC 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181 + +G+D A+ +A+ NA G++ + DWFS+++ F VIVSNPPYI++ Sbjct: 135 QVIGIDRIPAAVALAQHNAARLGLT-NATFMPGDWFSALKQQQFAVIVSNPPYIDATDKH 193 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P +L G GL+ + IA ++L G +E G+ Q + +I Sbjct: 194 LSQGDVR-FEPASALVAGDGGLADIKIIAAQAGQYLANGGWLLLEHGWQQGAQIRQILSD 252 Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264 + +DYGGNDRV + Sbjct: 253 HHFCQIATCQDYGGNDRVTFGQK 275 >gi|283832856|ref|ZP_06352597.1| protein-(glutamine-N5) methyltransferase [Citrobacter youngae ATCC 29220] gi|291071456|gb|EFE09565.1| protein-(glutamine-N5) methyltransferase [Citrobacter youngae ATCC 29220] Length = 277 Score = 292 bits (747), Expect = 5e-77, Method: Composition-based stats. Identities = 93/262 (35%), Positives = 129/262 (49%), Gaps = 8/262 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 RD+ L VTG ++ ++VL + QR L + R + E + + G R+F++ Sbjct: 20 PRRDAEILLEFVTGKGRTFILAFGETVLTEAQREQLATLVARRQRGEPVAHLTGVREFWS 79 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +S T PRP+TE LV+ ALA RILDLGTGTGA+ LAL E P Sbjct: 80 LPLFVSPATLIPRPDTECLVEQALARL-----PASACRILDLGTGTGAIALALASERPDC 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181 VD A+ +A N + + LQSDWFS++ G FD+IVSNPPYI+ Sbjct: 135 AVTAVDRMPDAVALAMRN-TRHLAIDNVQVLQSDWFSALSGQQFDMIVSNPPYIDEQDPH 193 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P +L G +GL+ I D L G +E G+ Q V F Sbjct: 194 LAQGDVR-FEPLSALVAGENGLADIVHIIDSSRSVLTPGGYLLLEHGWQQGAAVREAFIR 252 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 V +DYGGN+R+ L Sbjct: 253 AGYLAVETCRDYGGNERITLGR 274 >gi|89073092|ref|ZP_01159631.1| putative HemK protein, Methylase of polypeptide chain release factors [Photobacterium sp. SKA34] gi|89051045|gb|EAR56502.1| putative HemK protein, Methylase of polypeptide chain release factors [Photobacterium sp. SKA34] Length = 284 Score = 292 bits (747), Expect = 5e-77, Method: Composition-based stats. Identities = 88/263 (33%), Positives = 132/263 (50%), Gaps = 9/263 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 DS LC V ++ P+ LDD Q + R L E I I+G R+F++ Sbjct: 24 PQLDSAVLLCHVLDKPRSYLLTWPEKQLDDEQYNIFQQVLARRLNGEPIAYIVGEREFWS 83 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +S T PRP+TE LV+ AL K +LDLGTGTGA+ LA+ E P Sbjct: 84 LPLKVSPSTLIPRPDTERLVELALDKITSATSK-----VLDLGTGTGAIALAIASEYPSL 138 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIV 180 + G+D+ +A E+A N+ + L W+S ++ +F++IVSNPPYI+ Sbjct: 139 QVTGIDLRQEAAELAHENSQRLSILNT-RFLAGSWYSPLQHNDVFELIVSNPPYIDHADP 197 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 + +VR F+P+ +L +GL+ R I+ +HL G +E G+ Q + V I E Sbjct: 198 HLVQGDVR-FEPKSALVADDNGLADIRIISAQGRKHLTVGGWLLMEHGFEQGLAVRTILE 256 Query: 241 SRKLFLVNAFKDYGGNDRVLLFC 263 V+ +DY G DRV + C Sbjct: 257 QLGYQQVSTSQDYAGLDRVTMGC 279 >gi|120555271|ref|YP_959622.1| HemK family modification methylase [Marinobacter aquaeolei VT8] gi|120325120|gb|ABM19435.1| [protein release factor]-glutamine N5-methyltransferase [Marinobacter aquaeolei VT8] Length = 285 Score = 292 bits (747), Expect = 5e-77, Method: Composition-based stats. Identities = 82/263 (31%), Positives = 130/263 (49%), Gaps = 9/263 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 D+ L +TGL+ P+ + Q + + + +LG ++F++ Sbjct: 26 PRLDAELLLSHITGLTRTSFRAWPERDVPVEQAERFFELVGERASGQPVAYLLGEQEFWS 85 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +S T PRP TE +V++AL+ LP +LDLGTGTGA+ LAL E P + Sbjct: 86 LPLKVSPSTLIPRPGTECVVEAALSLELPA-----RASVLDLGTGTGAIALALASEQPGW 140 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVD 181 + + D A+ +A+ N+ + G+ ++S WF + G FD+++SNPPYI + Sbjct: 141 QVMASDRVEDAVALARENSQSLGLP--ITVVKSHWFDQIPAGTFDLLISNPPYIPASDRH 198 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P +L G DGL R + LN +G +E GY+Q V +F Sbjct: 199 LREGDVR-FEPESALVAGDDGLDDIRLLVTEGLNWLNPNGWMLLEHGYDQGSAVRDLFAK 257 Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264 + KDYGGNDR+ L + Sbjct: 258 AGWRNMETRKDYGGNDRMTLARK 280 >gi|167038491|ref|YP_001666069.1| HemK family modification methylase [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|167038766|ref|YP_001661751.1| HemK family modification methylase [Thermoanaerobacter sp. X514] gi|256751360|ref|ZP_05492239.1| modification methylase, HemK family [Thermoanaerobacter ethanolicus CCSD1] gi|300913649|ref|ZP_07130966.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Thermoanaerobacter sp. X561] gi|307723336|ref|YP_003903087.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Thermoanaerobacter sp. X513] gi|320116887|ref|YP_004187046.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|166853006|gb|ABY91415.1| modification methylase, HemK family [Thermoanaerobacter sp. X514] gi|166857325|gb|ABY95733.1| modification methylase, HemK family [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|256749742|gb|EEU62767.1| modification methylase, HemK family [Thermoanaerobacter ethanolicus CCSD1] gi|300890334|gb|EFK85479.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Thermoanaerobacter sp. X561] gi|307580397|gb|ADN53796.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Thermoanaerobacter sp. X513] gi|319929978|gb|ADV80663.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Thermoanaerobacter brockii subsp. finnii Ako-1] Length = 279 Score = 291 bits (746), Expect = 6e-77, Method: Composition-based stats. Identities = 81/264 (30%), Positives = 131/264 (49%), Gaps = 9/264 (3%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 ++ L G+ +I+ + +++ + + H I+ F Sbjct: 20 NPKLEAELLLAYCLGMDRINLIIKREDEVEEGELAKFLGLLNMRKSHIPYQYIVKKHYFM 79 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 + + + PRPETE+LV+ L + ++D+GTG+GA+ ++++K P Sbjct: 80 GLEFFVDENVLIPRPETEILVEEVLKRL------KKGNTLIDIGTGSGAIAVSVVKYFPD 133 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVI 179 VDIS KALE+AK NA + V ++ ++SD FS V FD IVSNPPYI+ Sbjct: 134 CFVYAVDISRKALEVAKYNAKKHNVLDKIVFIESDVFSQVPKNIKFDFIVSNPPYIKRGE 193 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 ++ L EV+ +P I+LDGG DGL Y+ I +G +LN +G E+GY+QK +V + Sbjct: 194 LETLQEEVKK-EPIIALDGGEDGLFFYKKIIEGAPFYLNPEGAICFEMGYDQKEEVTDLL 252 Query: 240 ESRKLFLVNAFKDYGGNDRVLLFC 263 + KD G DRV++ Sbjct: 253 TKGGFKNIEVIKDLSGIDRVVIAR 276 >gi|225027776|ref|ZP_03716968.1| hypothetical protein EUBHAL_02035 [Eubacterium hallii DSM 3353] gi|224954922|gb|EEG36131.1| hypothetical protein EUBHAL_02035 [Eubacterium hallii DSM 3353] Length = 297 Score = 291 bits (746), Expect = 6e-77, Method: Composition-based stats. Identities = 77/268 (28%), Positives = 128/268 (47%), Gaps = 15/268 (5%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 +S +FL + + ++P+ + + L + + + + + ++G +F Sbjct: 25 ESWAFLDWKLHIDRAEFYMNPNGEVKEELLAELESVLKQREQRVPLQYLMGECEFMGYDF 84 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRI-------------EKRDVVRILDLGTGTGAVC 112 + PR +TE LV+ A+ R + V++LDL TG+G + Sbjct: 85 YVDERVLIPRQDTECLVELAVEDIRNRKTQNRCESNNTADQKNEQKVKVLDLCTGSGCIG 144 Query: 113 LALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNP 172 +++ K P + DIS AL +AK NA ++ + F ++EG FD I+SNP Sbjct: 145 ISVAKLCPDTEVTLADISEGALSVAKKNAQNLDAG--VTLIKGNLFENIEGRFDYILSNP 202 Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232 PYI S +++ L EV++ +PR++LDG DGLS YR I + +LN DG EIG Q Sbjct: 203 PYIPSEVIEGLMPEVKEHEPRLALDGEADGLSFYREIINEAPDYLNPDGRIYFEIGAEQG 262 Query: 233 VDVVRIFESRKLFLVNAFKDYGGNDRVL 260 D+ + R V KD G DR++ Sbjct: 263 EDLTHLMNERGFSEVKVHKDLAGLDRIV 290 >gi|227355361|ref|ZP_03839762.1| protein methyltransferase (protein-glutamine N-methyltransferase) [Proteus mirabilis ATCC 29906] gi|227164585|gb|EEI49456.1| protein methyltransferase (protein-glutamine N-methyltransferase) [Proteus mirabilis ATCC 29906] Length = 282 Score = 291 bits (746), Expect = 6e-77, Method: Composition-based stats. Identities = 89/262 (33%), Positives = 136/262 (51%), Gaps = 8/262 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 RD+ L VT + +I ++VL + + L++ + R +K E I ++G R+F++ Sbjct: 20 PKRDAEILLGHVTKRARTYLIAFSETVLLEDELVQLSSLLARRIKGEPIAYLVGEREFWS 79 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +S T PRP+TE LV+ AL + RILDLGTGTGA+ LA+ E Sbjct: 80 LPLKVSPATLIPRPDTECLVEKALEKLSAQAS-----RILDLGTGTGAIALAIASERSDC 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181 + +GVD +A+ +A NA +S + +S WFSS+ G FD+I+SNPPYI+ Sbjct: 135 RVLGVDFQPEAVALAIENAQHLALS-NVEFTESCWFSSLSGYQFDMIISNPPYIDEEDEH 193 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P +L G + I + L +G +E G+ Q V IF Sbjct: 194 LYQGDVR-FEPLTALVAADHGFADIELIITNARQFLANNGWVLIEHGWQQGERVRNIFID 252 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 + V F+DYGGN+RV + Sbjct: 253 KGYCCVETFRDYGGNERVTVGR 274 >gi|170742858|ref|YP_001771513.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Methylobacterium sp. 4-46] gi|168197132|gb|ACA19079.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Methylobacterium sp. 4-46] Length = 295 Score = 291 bits (746), Expect = 6e-77, Method: Composition-based stats. Identities = 107/262 (40%), Positives = 152/262 (58%), Gaps = 3/262 (1%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A D+ L G+S +++ D LD+ Q L+ A+ R E + RILG +F+ Sbjct: 30 AALDARLILTETLGVSRVDLLLGADGPLDEAQARSLSAALRRRASGEPVARILGAWEFWG 89 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + LS DT PRP+TE LV++AL PR +R+LDLGTG+G + +ALL E P Sbjct: 90 LPFRLSPDTLVPRPDTETLVEAALDLGHPR---DAALRLLDLGTGSGCLLVALLSEWPRA 146 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182 +GVG+D+S +AL A++NA NGV R L+ DW +++ G FDV V+NPPYI + ++ Sbjct: 147 EGVGIDLSLEALRTARANAARNGVGARAAWLRGDWAAALAGRFDVAVANPPYIAANLIPG 206 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 L EVRD DPR++LDGG DGL YR I + L G VEIGY+Q+ + + E+ Sbjct: 207 LAPEVRDHDPRLALDGGADGLDCYRVILAQAADFLAPGGHLVVEIGYDQEEALRHLAEAA 266 Query: 243 KLFLVNAFKDYGGNDRVLLFCR 264 L +V +D G+ R L R Sbjct: 267 GLRVVVVRRDLAGHPRAALLAR 288 >gi|94500022|ref|ZP_01306557.1| modification methylase, HemK family protein [Oceanobacter sp. RED65] gi|94427880|gb|EAT12855.1| modification methylase, HemK family protein [Oceanobacter sp. RED65] Length = 281 Score = 291 bits (746), Expect = 6e-77, Method: Composition-based stats. Identities = 86/261 (32%), Positives = 126/261 (48%), Gaps = 10/261 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A D+ L V + + D+ L Q T + R + E + I+G F++ Sbjct: 23 AKLDAELLLLHVLKQTRTFLFTHSDTELSQEQYLQFTQLLERRKQGEPVAYIIGQTGFWD 82 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + + +S T PR +TE L+D + P+ +LDLGTGTGA+ LA KE P Sbjct: 83 LTIKVSPATLIPRGDTESLMDYIVEHFNPK-------NVLDLGTGTGALALATAKEYPQA 135 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181 V VD+ +A+ +AK NA N V+ + LQSDWF+ V FD+IVSNPPYI++ Sbjct: 136 SVVAVDVIEEAVALAKENAKLNKVT-NVEILQSDWFALVPKRRFDLIVSNPPYIDANDHH 194 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR ++P+ +L GL+ I + L +DG VE GY+Q V IF Sbjct: 195 LGEGDVR-YEPKSALVAERHGLADIEKICNQALSFLTEDGCLMVEHGYDQGPHVRAIFSQ 253 Query: 242 RKLFLVNAFKDYGGNDRVLLF 262 + +D G DR L Sbjct: 254 SGFSNIETHQDLAGRDRFTLG 274 >gi|291550092|emb|CBL26354.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Ruminococcus torques L2-14] Length = 312 Score = 291 bits (746), Expect = 6e-77, Method: Composition-based stats. Identities = 78/269 (28%), Positives = 133/269 (49%), Gaps = 10/269 (3%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 +A D+ L VTG++ + +DPD +D + + H + I G ++F Sbjct: 39 EADLDAWYLLEFVTGITKARYYMDPDQSMDPEAWKKYKEYLEKRRNHIPLQHITGSQEFM 98 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRI-EKRDVVRILDLGTGTGAVCLALLKESP 120 + ++ PR +TE+LV+ AL I + +++LD+ TG+G + L+++ + Sbjct: 99 GLEFLVNEHVLIPRQDTEVLVEEALEMMKQEIFRSKGCLQLLDMCTGSGCILLSVMHYAE 158 Query: 121 F----FKGVGVDISCKALEIAKSNAVTN-----GVSERFDTLQSDWFSSVEGLFDVIVSN 171 +G GVD S +AL +A+ N + + + + SD F +V +D+I+SN Sbjct: 159 QKGIFIEGTGVDFSEQALMVAQKNEKHLRSTKKDENGKVNWILSDLFENVSETYDMILSN 218 Query: 172 PPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231 PPYI + ++ L EV+ DP +LDG DGL YR I + L G+ + EIGY+Q Sbjct: 219 PPYIRTAEIEKLQDEVKLHDPFSALDGKEDGLYFYRKIVTDAKQFLKTGGILAFEIGYDQ 278 Query: 232 KVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 +V + + V KD G DR++ Sbjct: 279 GKEVSDLMKKAGYDKVFVKKDLAGLDRIV 307 >gi|295095635|emb|CBK84725.1| [protein release factor]-glutamine N5-methyltransferase [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 276 Score = 291 bits (746), Expect = 6e-77, Method: Composition-based stats. Identities = 87/262 (33%), Positives = 129/262 (49%), Gaps = 8/262 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 RD+ L VTG + ++ ++ L Q+ L + R E + ++ R+F++ Sbjct: 20 PKRDAEILLEHVTGKARTYLLAFGETALTAEQQSQLEALLARRKTGEPVAHLVCEREFWS 79 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +S+ T PRP+TE LV+ ALA +ILDLGTGTGA+ LAL E P Sbjct: 80 LPLYVSAATLIPRPDTECLVEQALARL-----PAQPCQILDLGTGTGAIALALASERPDC 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181 VD+ A+ +A+ N G+ LQS WF+++E F++IVSNPPYI+ Sbjct: 135 TVTAVDVMPDAVALARRNVERLGL-NNVSVLQSSWFAALESRMFEMIVSNPPYIDEDDPH 193 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P +L GL+ I +HL G VE G+ Q V +F Sbjct: 194 LAQGDVR-FEPLTALVAANQGLADLDHIVTTSRQHLLPGGWLLVEHGWTQGEAVRALFTR 252 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 V +DYGGN+R+ L Sbjct: 253 AGYAAVETCRDYGGNERLTLGQ 274 >gi|261340149|ref|ZP_05968007.1| protein-(glutamine-N5) methyltransferase [Enterobacter cancerogenus ATCC 35316] gi|288317664|gb|EFC56602.1| protein-(glutamine-N5) methyltransferase [Enterobacter cancerogenus ATCC 35316] Length = 276 Score = 291 bits (746), Expect = 7e-77, Method: Composition-based stats. Identities = 90/262 (34%), Positives = 130/262 (49%), Gaps = 8/262 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 RD+ L VTG + ++ ++ L Q L+ + R E + ++G R+F++ Sbjct: 20 PKRDAEILLEHVTGKTRTWLLAFGETALTAEQEAALSALLARRKTGEPVAHLVGEREFWS 79 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +S+ T PRP+TE LV+ ALA ILDLGTGTGA+ LAL E P Sbjct: 80 LPLYVSAATLIPRPDTECLVEQALARL-----PEQSTAILDLGTGTGAIALALASERPDC 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181 VD+ A+ +A+ N G+ LQS WFS++E F +IVSNPPYI+ Sbjct: 135 SVTAVDLMPDAVALAQRNVQRLGLC-NVTVLQSRWFSALEARSFGMIVSNPPYIDENDPH 193 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+PR +L +GL+ I +HL G VE G+ Q V +F Sbjct: 194 LAQGDVR-FEPRTALVASGEGLADLDHIVTTSRQHLLHGGWLLVEHGWTQGEAVRDLFTR 252 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 V +DYGGN+R+ L Sbjct: 253 AGYTGVETCRDYGGNERLTLGQ 274 >gi|229844231|ref|ZP_04464372.1| HemK [Haemophilus influenzae 6P18H1] gi|229813225|gb|EEP48913.1| HemK [Haemophilus influenzae 6P18H1] Length = 292 Score = 291 bits (745), Expect = 7e-77, Method: Composition-based stats. Identities = 99/270 (36%), Positives = 149/270 (55%), Gaps = 12/270 (4%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 + D+ L TG S Q++ D+ +D++ R LT + R LK E I ILG ++F+ Sbjct: 22 NSKIDALVLLQHATGKSRTQILAFDDTEIDEKVRLKLTALLDRRLKGEPIAYILGEKEFW 81 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALLKESP 120 ++ L +S T PRP+TE+LV+ AL +L ++E+ RILDLGTGTGA+ LAL E Sbjct: 82 SLPLNVSKGTLIPRPDTEILVEKALQIALEKLEENPPHFRILDLGTGTGAIALALASELA 141 Query: 121 FF--------KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNP 172 + +GVD+ + +A+SNA N + LQS WF ++ G FD+IVSNP Sbjct: 142 PICQKRHIPLEIIGVDLMPDVVALAQSNAERNQL--NVQFLQSRWFDNITGQFDLIVSNP 199 Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232 PYI++ +VR F+P +L +G + R I + S +LN +G+ +E G+ Q Sbjct: 200 PYIDAQDEHLHQGDVR-FEPLSALVANDEGYADLRHIIELASSYLNSNGVLLLEHGWQQG 258 Query: 233 VDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262 V IF+ +V +DYG N+RV L Sbjct: 259 EKVRSIFQENHWEMVETVRDYGDNERVTLG 288 >gi|254509163|ref|ZP_05121262.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Vibrio parahaemolyticus 16] gi|219547914|gb|EED24940.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Vibrio parahaemolyticus 16] Length = 286 Score = 291 bits (745), Expect = 8e-77, Method: Composition-based stats. Identities = 89/260 (34%), Positives = 127/260 (48%), Gaps = 9/260 (3%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 D+ LC ++ PD +LD Q + + R L E + I+G R+F+++ Sbjct: 28 LDAAVLLCHALDKPRSFLLTWPDKLLDAEQLAQFASLLERRLGGEPVAYIVGEREFWSLP 87 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L ++ T PRP+TE LV+ AL + ILDLGTGTGA+ LAL E P + Sbjct: 88 LDVAPSTLIPRPDTERLVEIALDKA-----SDSEGDILDLGTGTGAIALALASELPNRRV 142 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIESVIVDC 182 GVD+ A ++A SNA + + WF +E F +IVSNPPYIE Sbjct: 143 WGVDLKEDARQLASSNAKKLNIP-NCEFRSGSWFDPIESGTQFALIVSNPPYIEKSDPHL 201 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 +VR F+P +L +GL+ + I++ HL G E GY+Q + V + S Sbjct: 202 SQGDVR-FEPLSALVAEDNGLADIKYISEVARSHLQPGGWLMFEHGYDQGIAVRDLLASL 260 Query: 243 KLFLVNAFKDYGGNDRVLLF 262 V FKDYG NDRV + Sbjct: 261 GYDQVETFKDYGNNDRVTIG 280 >gi|145642041|ref|ZP_01797612.1| HemK [Haemophilus influenzae R3021] gi|145273221|gb|EDK13096.1| HemK [Haemophilus influenzae 22.4-21] Length = 292 Score = 291 bits (745), Expect = 8e-77, Method: Composition-based stats. Identities = 100/270 (37%), Positives = 150/270 (55%), Gaps = 12/270 (4%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 + D+ L VTG S Q++ D+ +D++ R LT + R LK E I ILG ++F+ Sbjct: 22 NSKIDALVLLQHVTGKSRTQILAFDDTEIDEKVRLKLTALLDRRLKGEPIAYILGEKEFW 81 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALLKESP 120 ++ L +S T PRP+TE+LV+ AL +L ++E+ RILDLGTGTGA+ LAL E Sbjct: 82 SLPLNVSKGTLIPRPDTEILVEKALQIALEKLEENPPHFRILDLGTGTGAIALALASELE 141 Query: 121 FF--------KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNP 172 + +GVD+ + +A+SNA N + + LQS WF ++ G FD+IVSNP Sbjct: 142 PICQKRHIPLEIIGVDLMPDVVALAQSNAERNQL--NVEFLQSRWFDNITGKFDLIVSNP 199 Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232 PYI++ +VR F+P +L +G + R I + S +LN +G+ +E G+ Q Sbjct: 200 PYIDAQDEHLHQGDVR-FEPLSALVANDEGYADLRHIIELASSYLNSNGVLLLEHGWQQG 258 Query: 233 VDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262 V IF +V +DYG N+RV L Sbjct: 259 EKVRSIFLENYWEMVETVRDYGDNERVTLG 288 >gi|313905738|ref|ZP_07839098.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Eubacterium cellulosolvens 6] gi|313469445|gb|EFR64787.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Eubacterium cellulosolvens 6] Length = 282 Score = 291 bits (745), Expect = 8e-77, Method: Composition-based stats. Identities = 90/264 (34%), Positives = 131/264 (49%), Gaps = 8/264 (3%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 A D+ L G++ + + +D+ + R L H + I G F Sbjct: 26 DAKTDAWLLLEYAAGITRSFYTLHMNDPMDNSVAEAYEQYLQRRLGHLPVQHITGEAWFC 85 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 ++ D PR +TE+LV+ AL P +RILD+ TG+G + L+LLK Sbjct: 86 GYSFYVTEDVLIPRQDTEVLVEEALRVLRP------GMRILDMCTGSGCILLSLLKGR-E 138 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180 G VD+S AL +A+ N G++ ++ L SD F VEG +D+IV+NPPYI + + Sbjct: 139 VTGTAVDLSPAALAVAEENRKRLGIAEDQVKFLHSDLFEKVEGCYDMIVTNPPYIPTEVC 198 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 L EVRD +P ++LDG DGL R IA+ +L KD + +EIGY+Q + I Sbjct: 199 QELDPEVRDHEPMMALDGREDGLYFERKIAEDAKAYLKKDAMIFMEIGYDQGDAMREILL 258 Query: 241 SRKLFLVNAFKDYGGNDRVLLFCR 264 S V +D GGNDRV R Sbjct: 259 SLGYKDVRIVRDLGGNDRVACGRR 282 >gi|206891037|ref|YP_002248217.1| HemK family protein [Thermodesulfovibrio yellowstonii DSM 11347] gi|206742975|gb|ACI22032.1| HemK family protein [Thermodesulfovibrio yellowstonii DSM 11347] Length = 279 Score = 291 bits (745), Expect = 8e-77, Method: Composition-based stats. Identities = 81/262 (30%), Positives = 135/262 (51%), Gaps = 5/262 (1%) Query: 4 LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63 +R++ +C V + Q+ + + + Q + + I R LK E + I+G FYN+ Sbjct: 18 IREAQEIICHVLKIDKIQLYTE-NPEITSEQAHTIKSLIERRLKKEPLQYIIGECYFYNI 76 Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 ++ + PRPETE+LV+ L ++ RILDL TG+G + LA+ K +P F+ Sbjct: 77 KIKVGRGVLIPRPETEILVEQVLE--RQKLISNTGNRILDLCTGSGCIALAIGKNAPEFQ 134 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDC 182 G+D S KA++ A N N + L D F+ + F I +NPPY+++ + Sbjct: 135 IFGIDKSEKAVKYATENKALNNIK-NVIFLVGDMFNPFKEKIFACITANPPYVKTDEISK 193 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 L E+++++P +L+GG DGL+ YR I + ++L GL +EIG Q V I Sbjct: 194 LQPEIKNYEPLEALNGGEDGLNFYRKIIENAEKYLLNSGLIFLEIGQGQAKAVQNIALMS 253 Query: 243 KLFLVNAFKDYGGNDRVLLFCR 264 ++ KD G DRV++ + Sbjct: 254 GFNVIEVVKDIAGIDRVMILQK 275 >gi|146311982|ref|YP_001177056.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Enterobacter sp. 638] gi|145318858|gb|ABP61005.1| [protein release factor]-glutamine N5-methyltransferase [Enterobacter sp. 638] Length = 276 Score = 291 bits (745), Expect = 9e-77, Method: Composition-based stats. Identities = 88/262 (33%), Positives = 128/262 (48%), Gaps = 8/262 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 RD+ L VTG + ++ ++ L Q L++ + R E + + G R+F++ Sbjct: 20 PRRDAEILLEHVTGKARTYLLAFGETELTADQHAQLSDLLSRRKAGEPVAHLTGEREFWS 79 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +S+ T PRP+TE LV+ ALA RILDLGTGTGA+ LAL E P Sbjct: 80 LPLYVSAATLIPRPDTECLVEHALARL-----PATACRILDLGTGTGAIALALASERPDC 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181 + VD+ A+ +A N G QS WF ++ G F++IVSNPPYI+ Sbjct: 135 QITAVDVMPDAVALALRNVARLGF-NNVKIQQSSWFDALVGQQFEMIVSNPPYIDERDPH 193 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P +L +GL+ I +HL G +E G+ Q V +F Sbjct: 194 LSQGDVR-FEPLTALVAAEEGLADIAHIVTVSRQHLTAGGWLLIEHGWTQGEAVRALFTH 252 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 V +DYGGNDR+ L Sbjct: 253 AGYERVETCQDYGGNDRLTLGR 274 >gi|13472969|ref|NP_104536.1| protoporphyrinogen oxidase, hemK protein [Mesorhizobium loti MAFF303099] gi|18202648|sp|Q98G94|HEMK_RHILO RecName: Full=Protein methyltransferase hemK homolog; AltName: Full=M.MloHemKP gi|14023717|dbj|BAB50322.1| protoporphyrinogen oxidase; HemK [Mesorhizobium loti MAFF303099] Length = 290 Score = 290 bits (744), Expect = 9e-77, Method: Composition-based stats. Identities = 118/262 (45%), Positives = 157/262 (59%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 D+ + +G + Q I DP+ +D + A+ R E +HRILG+R+FY Sbjct: 27 DPALDARLIVEHFSGTTRTQAIADPERTIDSNAIAAIDAALGRRAGGEPVHRILGYREFY 86 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 +RL+LS +T EPRP+TE LV++ L F + RILDLGTGTGA+ LALL P Sbjct: 87 GLRLSLSPETLEPRPDTETLVEAVLPFVKAMAAREGTCRILDLGTGTGAIALALLSAVPA 146 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181 GVDIS AL A NA G+ RF T+QSDWF V G + VI +NPPYI + + Sbjct: 147 ATATGVDISAGALATAARNAGELGLGGRFTTVQSDWFEKVSGRYHVIAANPPYIPTRDIG 206 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 L EVRDFDPR++LDGG+DGL+ YR IA +R L + +VEIG+ Q+ +V IF++ Sbjct: 207 NLQDEVRDFDPRLALDGGVDGLNPYRIIAAEAARFLEAESRIAVEIGHTQRDEVTDIFKA 266 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 V A +D GGNDRVL+F Sbjct: 267 AGYASVAALRDLGGNDRVLVFQ 288 >gi|319781346|ref|YP_004140822.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317167234|gb|ADV10772.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 290 Score = 290 bits (744), Expect = 1e-76, Method: Composition-based stats. Identities = 117/263 (44%), Positives = 157/263 (59%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 D+ + +G + Q I DP+ + + A+ R E +HRILG+R+FY Sbjct: 25 DPALDARLIVEHFSGTTRTQAIADPERRVGAGAVAEIDAALRRRAGGEPVHRILGYREFY 84 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 +RL+LS +T EPRP+TE LV++ L F + RILDLGTGTGA+ LALL P Sbjct: 85 GLRLSLSPETLEPRPDTETLVEAILPFVKAVATQEGECRILDLGTGTGAIALALLSVVPT 144 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181 GVD+S AL A NA G++ RF LQSDWF V G + VIV+NPPYI S + Sbjct: 145 ANATGVDLSAGALATAARNAGQLGLAGRFTALQSDWFEKVSGRYHVIVANPPYISSEDIG 204 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 L EV +FDPR++LDGG DGL+ YRTIA +R L +G +VEIG+ Q+ +V IF + Sbjct: 205 NLQDEVLNFDPRLALDGGADGLNPYRTIAAEAARFLEIEGRIAVEIGHTQRNEVCEIFTA 264 Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264 + F+D GGNDRV++F R Sbjct: 265 AGYVPGSVFRDLGGNDRVIVFER 287 >gi|90022890|ref|YP_528717.1| protein methyltransferase hemK [Saccharophagus degradans 2-40] gi|89952490|gb|ABD82505.1| modification methylase, HemK family [Saccharophagus degradans 2-40] Length = 288 Score = 290 bits (744), Expect = 1e-76, Method: Composition-based stats. Identities = 89/263 (33%), Positives = 131/263 (49%), Gaps = 5/263 (1%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 + D+ L V + + D + Q + + + I + G ++F++ Sbjct: 25 SRLDAEVLLAFVMQKNRTWLYTWSDKIPSPDQLQQFNQLVSQRQQGTPIAYLTGEKEFWS 84 Query: 63 VRLTLSSDTFEPRPETELLVDSA--LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120 + L +S T PR +TE+LV+ A LA +L + ++ +RILDLGTGTGA+ LAL E P Sbjct: 85 LPLQVSPATLIPRGDTEILVEVALELAQTLQQKNPQEHIRILDLGTGTGAIALALASELP 144 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVI 179 VD +A+E+A+ N G L SDWFS++ F VIVSNPPYI+ Sbjct: 145 TANITAVDKMPQAVELAEKNRAALGFK-NVTVLHSDWFSAITLQKFHVIVSNPPYIDEQD 203 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 +VR F+P +L GL+ + IA+ +HL +G VE G+ Q V +F Sbjct: 204 PHLKQGDVR-FEPLTALVAPNQGLADIQHIAEHAKQHLLPNGFLCVEHGWQQAEAVRGVF 262 Query: 240 ESRKLFLVNAFKDYGGNDRVLLF 262 E V + KD GGNDRV L Sbjct: 263 EKNGYVGVRSEKDNGGNDRVTLG 285 >gi|56413304|ref|YP_150379.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197362229|ref|YP_002141866.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|56127561|gb|AAV77067.1| HemK protein, putative protoporphyrinogen oxidase [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197093706|emb|CAR59178.1| HemK protein, putative protoporphyrinogen oxidase [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] Length = 277 Score = 290 bits (744), Expect = 1e-76, Method: Composition-based stats. Identities = 92/259 (35%), Positives = 131/259 (50%), Gaps = 8/259 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 RD+ L VTG ++ ++ L D Q+ L + + R + E I + G R+F++ Sbjct: 20 PRRDAEILLEYVTGKGRTYIMAFGETPLTDVQQQQLADLLQRRRQGEPIAYLTGLREFWS 79 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +S T PRP+TE LV+ ALA RILDLGTGTGA+ LAL E P Sbjct: 80 LPLFVSPATLIPRPDTECLVEQALARL-----PVKTCRILDLGTGTGAIALALACERPDC 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181 + VD A+ +A NA + LQS WFS++ G FD+IVSNPPYI++ Sbjct: 135 EVTAVDRMPDAVALAIRNAEHLAIQ-NVRILQSCWFSALSGQQFDMIVSNPPYIDAQDPH 193 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+PR +L +G++ I D + L G +E G+ Q V +F Sbjct: 194 LSEGDVR-FEPRSALVADENGMADLTHIIDNARQMLTPGGFLLLEHGWQQGEAVRAVFRR 252 Query: 242 RKLFLVNAFKDYGGNDRVL 260 V +DYGGN+RV Sbjct: 253 SGYTDVETCRDYGGNERVT 271 >gi|229826187|ref|ZP_04452256.1| hypothetical protein GCWU000182_01559 [Abiotrophia defectiva ATCC 49176] gi|229789057|gb|EEP25171.1| hypothetical protein GCWU000182_01559 [Abiotrophia defectiva ATCC 49176] Length = 283 Score = 290 bits (743), Expect = 1e-76, Method: Composition-based stats. Identities = 83/261 (31%), Positives = 131/261 (50%), Gaps = 8/261 (3%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 +A D+ L +V+GL+ + + D +D+ + I R + + ++G RDF Sbjct: 26 EAELDARYILEKVSGLNRAEYFLHSDDKIDNDKTEEFLRLIERRSERIPLSYVIGTRDFM 85 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 + ++ + P ETELL + + +LD+ TG+G + +++ Sbjct: 86 GLTFKVNENVLIPEQETELLAEEVIKHC-------KGKTVLDMCTGSGCIAISVSLLGEP 138 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181 + DIS KALE+AK NA S ++ D F ++ G FD+IVSNPPYIE+ +++ Sbjct: 139 SEVTASDISDKALEVAKENAEFLNAS-TVKFIKGDLFENITGSFDIIVSNPPYIETRVIE 197 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 L EVRD+ PR++LDG DGL Y+ I ++LNK+ EIGYNQ V I Sbjct: 198 ELEPEVRDYIPRLALDGDEDGLKFYKNITKKAIKYLNKNARIFYEIGYNQSEAVTDILLE 257 Query: 242 RKLFLVNAFKDYGGNDRVLLF 262 + KDY G DR++ Sbjct: 258 NGFEEIKIIKDYSGLDRIVTA 278 >gi|237731779|ref|ZP_04562260.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Citrobacter sp. 30_2] gi|226907318|gb|EEH93236.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Citrobacter sp. 30_2] Length = 277 Score = 290 bits (743), Expect = 1e-76, Method: Composition-based stats. Identities = 93/262 (35%), Positives = 129/262 (49%), Gaps = 8/262 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 RD+ L VTG ++ ++ L + QR L + R + E + + G R+F++ Sbjct: 20 PRRDAEILLEFVTGKGRTFILAFGETELTEAQRQQLDTLLERRQRGEPVAHLTGVREFWS 79 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +S T PRP+TE LV+ ALA RILDLGTGTGA+ LAL E P Sbjct: 80 LPLFVSPATLIPRPDTECLVEQALARL-----PASACRILDLGTGTGAIALALATERPDC 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181 VD A+ +A N G+ LQS+WFS+++G FD+IVSNPPYI+ Sbjct: 135 AVTAVDRMPDAVALAIRNKQQLGI-NNVCVLQSNWFSALQGQQFDMIVSNPPYIDEQDPH 193 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P +L G GL+ I D R L G +E G+ Q V F Sbjct: 194 LAQGDVR-FEPLSALVAGDQGLADIVHIIDQSLRMLTPGGYLLLEHGWQQGEAVRDAFTR 252 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 V +DYGGN+R+ L Sbjct: 253 AGYLAVETCRDYGGNERITLGR 274 >gi|16273459|ref|NP_439708.1| hypothetical protein HI1559 [Haemophilus influenzae Rd KW20] gi|260580340|ref|ZP_05848169.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Haemophilus influenzae RdAW] gi|1170230|sp|P45253|HEMK_HAEIN RecName: Full=Protein methyltransferase hemK homolog; AltName: Full=M.HindHemKP gi|1574403|gb|AAC23208.1| hemK protein (hemK) [Haemophilus influenzae Rd KW20] gi|260093017|gb|EEW76951.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Haemophilus influenzae RdAW] Length = 292 Score = 290 bits (743), Expect = 1e-76, Method: Composition-based stats. Identities = 98/270 (36%), Positives = 149/270 (55%), Gaps = 12/270 (4%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 + D+ L TG S Q++ D+ +D++ R LT + R LK E I ILG ++F+ Sbjct: 22 NSKIDALVLLQHATGKSRTQILAFDDTEIDEKVRLKLTALLDRRLKGEPIAYILGEKEFW 81 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALLKESP 120 ++ L +S T PRP+TE+LV+ AL +L ++E+ RILDLGTGTGA+ LAL E Sbjct: 82 SLPLNVSKGTLIPRPDTEILVEKALQIALEKLEENPPHFRILDLGTGTGAIALALASELA 141 Query: 121 FF--------KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNP 172 + +GVD+ + +A+SNA N + + LQS WF ++ G FD+IVSNP Sbjct: 142 PICQKRHIPLEIIGVDLMSDVVALAQSNAERNQL--NVEFLQSRWFDNITGKFDLIVSNP 199 Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232 PYI++ +VR F+P +L +G + R I + S +LN +G+ +E G+ Q Sbjct: 200 PYIDAQDEHLHQGDVR-FEPLSALVANDEGYADLRHIIELASSYLNSNGVLLLEHGWQQG 258 Query: 233 VDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262 V IF+ +V +DY N+RV L Sbjct: 259 EKVRSIFQENHWEMVETVRDYSDNERVTLG 288 >gi|253688499|ref|YP_003017689.1| modification methylase, HemK family [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251755077|gb|ACT13153.1| modification methylase, HemK family [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 281 Score = 290 bits (743), Expect = 1e-76, Method: Composition-based stats. Identities = 84/262 (32%), Positives = 134/262 (51%), Gaps = 8/262 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 RD+ L VTG ++ ++ L ++ L + R + E I ++G R+F++ Sbjct: 20 PKRDAEILLGFVTGKRRTFLLAFGETALSAAEQQQLAELLARREQGEPIAYLIGEREFWS 79 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L++S T PRP+TE LV+ AL + +LDLGTGTGA+ LAL E Sbjct: 80 LPLSVSPATLIPRPDTECLVEQALLRL-----PQKPCAVLDLGTGTGAIALALASERRDC 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181 + GVD+ A+ +A NA G+ + L W+S ++ F +I SNPPYI++ + Sbjct: 135 RVTGVDVQPDAVALATKNAQQLGL-DNAHFLSGSWYSPLDQTRFALIASNPPYIDADDMH 193 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P +L +GL+ RTI + +L G +E G+ Q V ++ ++ Sbjct: 194 LSQGDVR-FEPASALIAADNGLADLRTIIESAPHYLAAGGWLLLEHGWQQADAVRQLLQA 252 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 R + +DYGGNDRV L Sbjct: 253 RGFTQIETCQDYGGNDRVSLGR 274 >gi|167553920|ref|ZP_02347663.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|168462749|ref|ZP_02696680.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|195633874|gb|EDX52226.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|205321752|gb|EDZ09591.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] Length = 277 Score = 290 bits (743), Expect = 1e-76, Method: Composition-based stats. Identities = 92/259 (35%), Positives = 131/259 (50%), Gaps = 8/259 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 RD+ L VTG ++ ++ L D Q+ L + + R + E I + G R+F++ Sbjct: 20 PRRDAEILLEYVTGKGRTYIMAFGETPLTDVQQQQLADLLQRRKQGEPIAYLTGLREFWS 79 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +S T PRP+TE LV+ ALA RILDLGTGTGA+ LAL E P Sbjct: 80 LPLFVSPATLIPRPDTECLVEQALARL-----PVKTCRILDLGTGTGAIALALACERPDC 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181 + VD A+ +A NA + LQS WFS++ G FD+IVSNPPYI++ Sbjct: 135 EVTAVDRMPDAVALAIRNAEHLAIR-NVRILQSCWFSALSGQQFDMIVSNPPYIDAQDPH 193 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+PR +L +G++ I D + L G +E G+ Q V +F Sbjct: 194 LSEGDVR-FEPRSALVADENGMADLTHIIDNARQMLTPGGFLLLEHGWQQGEAVRAVFRR 252 Query: 242 RKLFLVNAFKDYGGNDRVL 260 V +DYGGN+RV Sbjct: 253 SGYTDVETCRDYGGNERVT 271 >gi|227111331|ref|ZP_03824987.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 281 Score = 290 bits (743), Expect = 1e-76, Method: Composition-based stats. Identities = 88/262 (33%), Positives = 137/262 (52%), Gaps = 8/262 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 RD+ L VTG S ++ ++ L+ ++ LT ++R + E I ++G R+F++ Sbjct: 20 PKRDAEILLGFVTGKSRTFLLAFGETELNTAEQQQLTELLLRREQGEPIAYLIGVREFWS 79 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +S T PRP+TE LV+ AL + +LDLGTGTGA+ LAL E Sbjct: 80 LPLAVSPATLIPRPDTECLVEQALLRL-----PQTPCAVLDLGTGTGAIALALASERHDC 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181 + GVD+ A+ +A NA G+ L W+S ++ F +I SNPPYI++ V Sbjct: 135 RVTGVDVQPDAVALATKNAQQLGLG-NVHFLSGSWYSPLDHTRFALIASNPPYIDADDVH 193 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P +L +GL+ RTI + +L+ DG +E G+ Q V ++ + Sbjct: 194 LSQGDVR-FEPASALIAADNGLADLRTIIESAPHYLDDDGWLLLEHGWQQADAVRQLLHA 252 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 R + +DYGGNDRV L Sbjct: 253 RGFTQIETCQDYGGNDRVSLGR 274 >gi|16765116|ref|NP_460731.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|62180339|ref|YP_216756.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161613729|ref|YP_001587694.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|167993218|ref|ZP_02574313.1| protein methyltransferase HemK [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168237829|ref|ZP_02662887.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|168820513|ref|ZP_02832513.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194443667|ref|YP_002041025.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194735200|ref|YP_002114805.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197265643|ref|ZP_03165717.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|198245434|ref|YP_002215370.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|207856718|ref|YP_002243369.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|224583735|ref|YP_002637533.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|17865746|sp|P40816|HEMK_SALTY RecName: Full=Protein methyltransferase hemK; AltName: Full=M.StyLTHemKP; AltName: Full=Protein-(glutamine-N(5)) MTase hemK; AltName: Full=Protein-glutamine N-methyltransferase hemK gi|16420305|gb|AAL20690.1| putative protoporphyrinogen oxidase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|62127972|gb|AAX65675.1| putative protoporphyrinogen oxidase [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161363093|gb|ABX66861.1| hypothetical protein SPAB_01454 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194402330|gb|ACF62552.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194710702|gb|ACF89923.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197243898|gb|EDY26518.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197289229|gb|EDY28596.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|197939950|gb|ACH77283.1| protein methyltransferase HemK [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|205328672|gb|EDZ15436.1| protein methyltransferase HemK [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205342641|gb|EDZ29405.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|206708521|emb|CAR32842.1| HemK protein, putative protoporphyrinogen oxidase [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|224468262|gb|ACN46092.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|261246961|emb|CBG24778.1| HemK protein, putative protoporphyrinogen oxidase [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267993723|gb|ACY88608.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301158299|emb|CBW17798.1| HemK protein, putative protoporphyrinogen oxidase [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312912764|dbj|BAJ36738.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|320085724|emb|CBY95502.1| possible protoporphyrinogen oxidase [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|321224403|gb|EFX49466.1| protein-glutamine-N5 methyltransferase, release factor-specific [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|322616771|gb|EFY13679.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322620419|gb|EFY17285.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322625679|gb|EFY22498.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322626129|gb|EFY22939.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322633736|gb|EFY30476.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322638890|gb|EFY35583.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322640873|gb|EFY37522.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322644094|gb|EFY40639.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322649165|gb|EFY45603.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322655324|gb|EFY51632.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322660918|gb|EFY57149.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322662785|gb|EFY58992.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322667969|gb|EFY64128.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322674269|gb|EFY70363.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322678550|gb|EFY74608.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322683209|gb|EFY79225.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322686903|gb|EFY82881.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|322714813|gb|EFZ06384.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] gi|323130045|gb|ADX17475.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|323195207|gb|EFZ80387.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323200202|gb|EFZ85288.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323204530|gb|EFZ89534.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323207353|gb|EFZ92301.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323213948|gb|EFZ98717.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323217338|gb|EGA02057.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323228021|gb|EGA12166.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323231360|gb|EGA15473.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323235800|gb|EGA19879.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323240369|gb|EGA24412.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323245261|gb|EGA29261.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323249066|gb|EGA32986.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323252823|gb|EGA36659.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323254892|gb|EGA38686.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323266734|gb|EGA50220.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323268941|gb|EGA52397.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] gi|326623116|gb|EGE29461.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Dublin str. 3246] gi|332988662|gb|AEF07645.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 277 Score = 290 bits (743), Expect = 2e-76, Method: Composition-based stats. Identities = 92/259 (35%), Positives = 131/259 (50%), Gaps = 8/259 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 RD+ L VTG ++ ++ L D Q+ L + + R + E I + G R+F++ Sbjct: 20 PRRDAEILLEYVTGKGRTYIMAFGETPLTDVQQQQLADLLQRRKQGEPIAYLTGLREFWS 79 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +S T PRP+TE LV+ ALA RILDLGTGTGA+ LAL E P Sbjct: 80 LPLFVSPATLIPRPDTECLVEQALARL-----PVKTCRILDLGTGTGAIALALACERPDC 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181 + VD A+ +A NA + LQS WFS++ G FD+IVSNPPYI++ Sbjct: 135 EVTAVDRMPDAVALAIRNAEHLAIR-NVRILQSCWFSALSGQQFDMIVSNPPYIDAQDPH 193 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+PR +L +G++ I D + L G +E G+ Q V +F Sbjct: 194 LSEGDVR-FEPRSALVADENGMADLTHIIDNARQMLTPGGFLLLEHGWQQGEAVRAVFRR 252 Query: 242 RKLFLVNAFKDYGGNDRVL 260 V +DYGGN+RV Sbjct: 253 SGYSDVETCRDYGGNERVT 271 >gi|109898877|ref|YP_662132.1| HemK family modification methylase [Pseudoalteromonas atlantica T6c] gi|109701158|gb|ABG41078.1| [protein release factor]-glutamine N5-methyltransferase [Pseudoalteromonas atlantica T6c] Length = 298 Score = 290 bits (743), Expect = 2e-76, Method: Composition-based stats. Identities = 92/272 (33%), Positives = 134/272 (49%), Gaps = 18/272 (6%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A DS +C V + ++ P+ LD+ Q + + I +LG+RDF++ Sbjct: 30 AALDSRLLMCHVLQCETAYLMTWPEKPLDELQLRTYQQLVAKRKTGYPIAYLLGYRDFWS 89 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 +RL +S T PRPETELLV++ L + + +LDLGTGTGA+ LAL E P + Sbjct: 90 LRLRVSPATLIPRPETELLVETVL-----NLPIAEDAHVLDLGTGTGAIALALASEKPNW 144 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-----------FDVIVSN 171 + +G+D S A+ +AK NA N + + +QSDWFS++E F +IVSN Sbjct: 145 QVLGIDKSADAVALAKQNAELNSLP-QVRFMQSDWFSALEQTQLDQQNNQHNVFSLIVSN 203 Query: 172 PPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231 PPY+E V +VR F+P +L G DGL R I L G + E GY Q Sbjct: 204 PPYVEDDSVYLQQGDVR-FEPASALTSGKDGLDDIRIIISKAITFLPSGGWLAFEHGYQQ 262 Query: 232 KVDVVRIFESRKLFLVNAFKDYGGNDRVLLFC 263 V + + V++ D R+ L C Sbjct: 263 AQGVQALLVNNGFEQVHSVNDLNDLPRITLGC 294 >gi|283785499|ref|YP_003365364.1| protein methyltransferase hemk (protein-glutamine N methyltransferase) [Citrobacter rodentium ICC168] gi|282948953|emb|CBG88556.1| protein methyltransferase hemk (protein-glutamine N methyltransferase) [Citrobacter rodentium ICC168] Length = 278 Score = 290 bits (743), Expect = 2e-76, Method: Composition-based stats. Identities = 92/262 (35%), Positives = 129/262 (49%), Gaps = 8/262 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 RD+ L VTG + ++ ++ L D Q+ L + R + E I + G R+F++ Sbjct: 20 PRRDAEILLEFVTGKTRTWILAFGETALTDTQQQQLATLLARRRRGEPIAHLTGVREFWS 79 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +S T PRP+TE LV+ ALA RILDLGTGTGA+ LAL E P Sbjct: 80 LPLFVSPATLIPRPDTECLVEQALARL-----PASPCRILDLGTGTGAIALALATERPDC 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181 VD A+ +A+ NA + LQSDWFS+V+G FD+IVSNPPYI+ Sbjct: 135 VITAVDRMPDAVALAQRNAAHLAIG-NVRILQSDWFSAVKGEQFDMIVSNPPYIDEQDPH 193 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P +L G G++ I L+ G +E G+ Q V F Sbjct: 194 LAEGDVR-FEPLSALVAGDHGMADIVQIIAQARDFLSAGGFLLLEHGWQQGAAVREAFSR 252 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 V +DYG N+R+ L Sbjct: 253 AGYQAVATCRDYGDNERITLGR 274 >gi|149192360|ref|ZP_01870563.1| HemK protein [Vibrio shilonii AK1] gi|148833799|gb|EDL50833.1| HemK protein [Vibrio shilonii AK1] Length = 284 Score = 290 bits (742), Expect = 2e-76, Method: Composition-based stats. Identities = 88/261 (33%), Positives = 125/261 (47%), Gaps = 9/261 (3%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 D+ LC V ++ P+ L + + R + E + ILG R+F+++ Sbjct: 28 LDAAVLLCHVLEKPRSYLLTWPEKALTSNEAEQFEALLNRRIAGEPVAYILGEREFWSLP 87 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L ++ T PRP+TE LV+ AL +L + ILDLGTGTGA+ LAL E Sbjct: 88 LNVAPSTLIPRPDTERLVELALDKALV-----NDGDILDLGTGTGAIALALASELKTRSV 142 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIESVIVDC 182 +GVD +A+E+A+SNA ++ Q WF V+ F VIVSNPPYI+ Sbjct: 143 MGVDFQTEAVELARSNATKLNIT-NCQFAQGSWFEPVDLVHKFSVIVSNPPYIDENDPHL 201 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 +VR F+P +L +GL+ TI HL + G E G+ Q V I + Sbjct: 202 SQGDVR-FEPSTALVAENNGLADIETITAKAPTHLLEGGWLLFEHGFEQGQAVREILVNN 260 Query: 243 KLFLVNAFKDYGGNDRVLLFC 263 V +DY GNDRV L Sbjct: 261 GFCHVVTEQDYAGNDRVTLGQ 281 >gi|153948102|ref|YP_001401038.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Yersinia pseudotuberculosis IP 31758] gi|152959597|gb|ABS47058.1| methyltransferase, HemK family [Yersinia pseudotuberculosis IP 31758] Length = 276 Score = 290 bits (742), Expect = 2e-76, Method: Composition-based stats. Identities = 86/261 (32%), Positives = 127/261 (48%), Gaps = 7/261 (2%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 RD+ L VTG + ++ ++ + Q +L R + E I ++G R+F++ Sbjct: 20 PKRDAEILLSFVTGKARTYLLAFGETEITAEQLLWLETLANRREQGEPIAYLVGEREFWS 79 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L++SS T PRP+TE LV+ ALA RILDLGTGTGA+ LAL E Sbjct: 80 LPLSVSSATLIPRPDTECLVEQALARL-----PSMPCRILDLGTGTGAIALALASERRDC 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182 + VDI+ A+ +A+ NA + + LQ WF V G F +I SNPPYI++ Sbjct: 135 AVIAVDINADAVALARHNAKKLAI-DNVCFLQGSWFEPVSGRFALIASNPPYIDANDPHL 193 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 +VR ++P L +G++ I +L G +E G+ Q V ++ Sbjct: 194 NEGDVR-YEPHSVLVAAAEGMADLAAIVSQAPGYLEPGGWLMLEHGWQQANAVQERLKNS 252 Query: 243 KLFLVNAFKDYGGNDRVLLFC 263 V KDYG NDRV L Sbjct: 253 GFSAVMTCKDYGNNDRVTLGQ 273 >gi|260914190|ref|ZP_05920663.1| protein methyltransferase HemK [Pasteurella dagmatis ATCC 43325] gi|260631823|gb|EEX50001.1| protein methyltransferase HemK [Pasteurella dagmatis ATCC 43325] Length = 308 Score = 290 bits (742), Expect = 2e-76, Method: Composition-based stats. Identities = 91/272 (33%), Positives = 132/272 (48%), Gaps = 16/272 (5%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 A D+ L VT + ++ P++ L + L + R K E I ILG ++F+ Sbjct: 34 DAKIDAMVLLSEVTQKTRAYILAFPETHLSADKLKQLEKYLTRRAKGEPIAYILGEKEFW 93 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEK---RDVVRILDLGTGTGAVCLALLKE 118 ++ L +S T PRP+TE+LV+ AL + R+ + ILDLGTGTGA+ LAL E Sbjct: 94 SLPLKVSKHTLIPRPDTEILVEQALEIAKQRLNSSYFSGELTILDLGTGTGAIALALASE 153 Query: 119 SP--------FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVI 168 + VD +A+E+A+ NA N + LQS WF +++ FDVI Sbjct: 154 LKMLTQKCGANLNILAVDRIAEAVELARENAKYNHLE--VTFLQSSWFDALDPSIKFDVI 211 Query: 169 VSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228 VSNPPYI+ +VR F+P +L +G + R I + + L G +E G Sbjct: 212 VSNPPYIDEKDSHLTQGDVR-FEPLSALVAEEEGYADLRHIIEQAPQFLKPQGYLLLEHG 270 Query: 229 YNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 + Q V IF V KDYG N+RV Sbjct: 271 WLQGEKVRSIFTENNWQQVQTLKDYGNNERVT 302 >gi|319776410|ref|YP_004138898.1| N5-glutamine methyltransferase, modifies release factors RF-1 and RF-2 [Haemophilus influenzae F3047] gi|329123574|ref|ZP_08252136.1| protein methyltransferase HemK [Haemophilus aegyptius ATCC 11116] gi|317451001|emb|CBY87231.1| N5-glutamine methyltransferase, modifies release factors RF-1 and RF-2 [Haemophilus influenzae F3047] gi|327470316|gb|EGF15776.1| protein methyltransferase HemK [Haemophilus aegyptius ATCC 11116] Length = 292 Score = 290 bits (742), Expect = 2e-76, Method: Composition-based stats. Identities = 95/270 (35%), Positives = 145/270 (53%), Gaps = 12/270 (4%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 + D+ L TG S Q++ D+ +D++ R LT + R LK E I ILG ++F+ Sbjct: 22 NSKIDALVLLQHATGKSRTQILAFDDTEIDEKVRLKLTALLDRRLKGEPIAYILGEKEFW 81 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV-RILDLGTGTGAVCLALLKESP 120 ++ L +S T PRP+TE+LV+ AL +L ++E+ ILDLGTGTGA+ LAL E Sbjct: 82 SLPLNVSKSTLIPRPDTEILVEKALQIALEKLEENPPHFCILDLGTGTGAIALALASELA 141 Query: 121 FF--------KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNP 172 + +GVD+ + +A+SN N + LQS WF ++ G FD+IVSNP Sbjct: 142 PICQKQHIPLEIIGVDLMPDVVALAQSNTERNQL--NVQFLQSCWFDNITGKFDLIVSNP 199 Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232 PYI++ +V F+P +L +G + R I + +LN +G+ +E G+ Q Sbjct: 200 PYIDAQDEHLHQGDV-SFEPLSALVANDEGYADLRHIIELAPSYLNSNGVLLLEHGWQQG 258 Query: 233 VDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262 V IF+ +V +DYG N+RV L Sbjct: 259 EKVRSIFQENHWEMVETVRDYGDNERVTLG 288 >gi|168233806|ref|ZP_02658864.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|194470184|ref|ZP_03076168.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194456548|gb|EDX45387.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|205332122|gb|EDZ18886.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] Length = 277 Score = 290 bits (742), Expect = 2e-76, Method: Composition-based stats. Identities = 92/259 (35%), Positives = 131/259 (50%), Gaps = 8/259 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 RD+ L VTG ++ ++ L D Q+ L + + R + E I + G R+F++ Sbjct: 20 PRRDAEILLEYVTGKGRTYIMAFGETPLTDVQQQQLADLLQRRKQGEPIAYLTGLREFWS 79 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +S T PRP+TE LV+ ALA RILDLGTGTGA+ LAL E P Sbjct: 80 LPLFVSPATLIPRPDTECLVEQALARL-----PLKTCRILDLGTGTGAIALALACERPDC 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181 + VD A+ +A NA + LQS WFS++ G FD+IVSNPPYI++ Sbjct: 135 EVTAVDRMPDAVALAIRNAEHLAIR-NVRILQSCWFSALSGQQFDMIVSNPPYIDAQDPH 193 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+PR +L +G++ I D + L G +E G+ Q V +F Sbjct: 194 LSEGDVR-FEPRSALVADENGMADLTHIIDNARQMLTPGGFLLLEHGWQQGEAVRAVFRR 252 Query: 242 RKLFLVNAFKDYGGNDRVL 260 V +DYGGN+RV Sbjct: 253 SGYSDVETCRDYGGNERVT 271 >gi|323261019|gb|EGA44614.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] Length = 292 Score = 290 bits (742), Expect = 2e-76, Method: Composition-based stats. Identities = 92/259 (35%), Positives = 131/259 (50%), Gaps = 8/259 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 RD+ L VTG ++ ++ L D Q+ L + + R + E I + G R+F++ Sbjct: 20 PRRDAEILLEYVTGKGRTYIMAFGETPLTDVQQQQLADLLQRRKQGEPIAYLTGLREFWS 79 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +S T PRP+TE LV+ ALA RILDLGTGTGA+ LAL E P Sbjct: 80 LPLFVSPATLIPRPDTECLVEQALARL-----PVKTCRILDLGTGTGAIALALACERPDC 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181 + VD A+ +A NA + LQS WFS++ G FD+IVSNPPYI++ Sbjct: 135 EVTAVDRMPDAVALAIRNAEHLAIR-NVRILQSCWFSALSGQQFDMIVSNPPYIDAQDPH 193 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+PR +L +G++ I D + L G +E G+ Q V +F Sbjct: 194 LSEGDVR-FEPRSALVADENGMADLTHIIDNARQMLTPGGFLLLEHGWQQGEAVRAVFRR 252 Query: 242 RKLFLVNAFKDYGGNDRVL 260 V +DYGGN+RV Sbjct: 253 SGYSDVETCRDYGGNERVT 271 >gi|168260000|ref|ZP_02681973.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|205350947|gb|EDZ37578.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] Length = 277 Score = 290 bits (742), Expect = 2e-76, Method: Composition-based stats. Identities = 92/259 (35%), Positives = 131/259 (50%), Gaps = 8/259 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 RD+ L VTG ++ ++ L D Q+ L + + R + E I + G R+F++ Sbjct: 20 PRRDAEILLEYVTGKGRTYIMAFGETPLTDVQQQQLADLLQRRKQGEPIAYLTGLREFWS 79 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +S T PRP+TE LV+ ALA RILDLGTGTGA+ LAL E P Sbjct: 80 LPLFVSPATLIPRPDTECLVEQALARL-----PVKTCRILDLGTGTGAIALALACERPDC 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181 + VD A+ +A NA + LQS WFS++ G FD+IVSNPPYI++ Sbjct: 135 EVTAVDRMPDAVALAIRNAEHLAIR-NVRILQSCWFSALSGQQFDMIVSNPPYIDAQDPH 193 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+PR +L +G++ I D + L G +E G+ Q V +F Sbjct: 194 LSEGDVR-FEPRSALVADENGMADLTHIIDNARQMLTPGGFLLLEHGWQQGEAVRAVFRR 252 Query: 242 RKLFLVNAFKDYGGNDRVL 260 V +DYGGN+RV Sbjct: 253 FGYTDVETCRDYGGNERVT 271 >gi|197249709|ref|YP_002146254.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197213412|gb|ACH50809.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Salmonella enterica subsp. enterica serovar Agona str. SL483] Length = 277 Score = 290 bits (742), Expect = 2e-76, Method: Composition-based stats. Identities = 92/259 (35%), Positives = 131/259 (50%), Gaps = 8/259 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 RD+ L VTG ++ ++ L D Q+ L + + R + E I + G R+F++ Sbjct: 20 PRRDAEILLEYVTGKGRTYIMAFGETPLTDVQQQQLADLLQRRKQGEPIAYLTGLREFWS 79 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +S T PRP+TE LV+ ALA RILDLGTGTGA+ LAL E P Sbjct: 80 LPLFVSPATLIPRPDTECLVEQALAQL-----PVKTCRILDLGTGTGAIALALACERPDC 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181 + VD A+ +A NA + LQS WFS++ G FD+IVSNPPYI++ Sbjct: 135 EVTAVDRMPDAVALAIRNAEHLAIR-NVRILQSCWFSALSGQQFDMIVSNPPYIDAQDPH 193 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+PR +L +G++ I D + L G +E G+ Q V +F Sbjct: 194 LSEGDVR-FEPRSALVADENGMADLTHIIDNARQMLTPGGFLLLEHGWQQGEAVRAVFRR 252 Query: 242 RKLFLVNAFKDYGGNDRVL 260 V +DYGGN+RV Sbjct: 253 SGYMDVETCRDYGGNERVT 271 >gi|204927633|ref|ZP_03218834.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|204322975|gb|EDZ08171.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] Length = 277 Score = 289 bits (741), Expect = 2e-76, Method: Composition-based stats. Identities = 92/259 (35%), Positives = 129/259 (49%), Gaps = 8/259 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 RD+ L VTG ++ ++ L D Q+ L + R + E I + G R+F++ Sbjct: 20 PRRDAEILLEYVTGKGRTYIMAFGETPLTDVQQQQLAELLQRRRQGEPIAYLTGLREFWS 79 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +S T PRP+TE LV+ ALA RILDLGTGTGA+ LAL E P Sbjct: 80 LPLFVSPATLIPRPDTECLVEQALARL-----PVKTCRILDLGTGTGAIALALACERPDC 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181 + VD A+ +A NA + LQS WFS++ G FD+IVSNPPYI++ Sbjct: 135 EVTAVDRMPDAVALAIRNAEHLAIR-NVRILQSCWFSALSGQQFDMIVSNPPYIDAQDPH 193 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+PR +L +G++ I D + L G +E G+ Q V F Sbjct: 194 LSEGDVR-FEPRSALVADENGMADLTHIIDNARQMLTPGGFLLLEHGWQQGEAVRAFFRR 252 Query: 242 RKLFLVNAFKDYGGNDRVL 260 V +DYGGN+RV Sbjct: 253 SGYSDVETCRDYGGNERVT 271 >gi|258621066|ref|ZP_05716100.1| conserved hypothetical protein [Vibrio mimicus VM573] gi|258586454|gb|EEW11169.1| conserved hypothetical protein [Vibrio mimicus VM573] Length = 286 Score = 289 bits (741), Expect = 2e-76, Method: Composition-based stats. Identities = 90/263 (34%), Positives = 128/263 (48%), Gaps = 9/263 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 D+ LC V ++ PD L++ L + R + E + ILG R+F++ Sbjct: 24 PALDAAVLLCHVLAKPRSYLLTWPDKTLEEPALVSLNALLARRMAGEPVAYILGEREFWS 83 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +S T PRP+TE LV+ AL + +LDLGTGTGA+ LAL E P Sbjct: 84 LPLKVSPSTLIPRPDTERLVELALEKA-----ALIEGELLDLGTGTGAIALALASELPLR 138 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIV 180 + G+D+ +A+E+A+ NA + LQ WFS + F +IVSNPPYIE Sbjct: 139 RVTGIDLRPEAVELAQENATRLSILNT-QFLQGSWFSPLADGTKFALIVSNPPYIEENDP 197 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 +VR F+P+ +L +GL+ R I+ R L + G E GY+Q V I Sbjct: 198 HLNQGDVR-FEPKSALVAEENGLADIRYISTHAPRFLLEGGWLLFEHGYDQGEAVRTILR 256 Query: 241 SRKLFLVNAFKDYGGNDRVLLFC 263 V +DY GNDRV L Sbjct: 257 ELGYQSVTTEQDYAGNDRVTLGQ 279 >gi|262404523|ref|ZP_06081078.1| Polypeptide chain release factor methylase [Vibrio sp. RC586] gi|262349555|gb|EEY98693.1| Polypeptide chain release factor methylase [Vibrio sp. RC586] Length = 286 Score = 289 bits (741), Expect = 2e-76, Method: Composition-based stats. Identities = 90/263 (34%), Positives = 127/263 (48%), Gaps = 9/263 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 D+ LC V ++ PD L++ L + R + E + ILG R+F++ Sbjct: 24 PALDAAVLLCHVLAKPRSYLLTWPDKTLEESALVSLNALLARRITGEPVAYILGEREFWS 83 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +S T PRP+TE LV+ AL + +LDLGTGTGA+ LAL E P Sbjct: 84 LPLKVSPSTLIPRPDTERLVELALEKA-----ALIEGELLDLGTGTGAIALALASELPLR 138 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIV 180 + G+D+ +A E+A+ NA + LQ WFS + G F +IVSNPPYIE Sbjct: 139 RVTGIDLRPEAAELAQENATRLSILNT-QFLQGSWFSPLAGGTKFALIVSNPPYIEENDP 197 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 +VR F+P+ +L +GL+ R I+ L + G E GY+Q V I Sbjct: 198 HLNQGDVR-FEPKSALVAEENGLADIRYISTHAPHFLLEGGWLLFEHGYDQGEAVRTILR 256 Query: 241 SRKLFLVNAFKDYGGNDRVLLFC 263 V +DY GNDRV L Sbjct: 257 DLGYQSVTTEQDYAGNDRVTLGQ 279 >gi|68249926|ref|YP_249038.1| hypothetical protein NTHI1574 [Haemophilus influenzae 86-028NP] gi|145631801|ref|ZP_01787561.1| HemK [Haemophilus influenzae R3021] gi|68058125|gb|AAX88378.1| HemK [Haemophilus influenzae 86-028NP] gi|144982591|gb|EDJ90141.1| HemK [Haemophilus influenzae R3021] Length = 292 Score = 289 bits (741), Expect = 3e-76, Method: Composition-based stats. Identities = 98/270 (36%), Positives = 147/270 (54%), Gaps = 12/270 (4%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 + D+ L TG S Q++ D+ +D++ R LT + R LK E I ILG ++F+ Sbjct: 22 NSKIDALVLLQHATGKSRTQILAFDDTEIDEKVRLKLTALLDRRLKGEPIAYILGEKEFW 81 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALLKESP 120 ++ L +S T PRP+TE LV+ AL +L ++E+ RILDLGTGTGA+ LAL E Sbjct: 82 SLPLNVSKSTLIPRPDTESLVEKALQIALEKLEENPPHFRILDLGTGTGAIALALASELE 141 Query: 121 FF--------KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNP 172 + +GVD+ + +A+SNA N + + LQS WF ++ G FD+IVSNP Sbjct: 142 PICQKRHIPLEIIGVDLMPDVVALAQSNAERNQL--NVEFLQSRWFDNITGKFDLIVSNP 199 Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232 PYI++ +VR F+P +L G + R I + S +LN +G+ +E G+ Q Sbjct: 200 PYIDAQDEHLHQGDVR-FEPLSALVANDAGYADLRHIIELASSYLNSNGVLLLEHGWQQG 258 Query: 233 VDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262 V IF+ +V +DY N+RV L Sbjct: 259 EKVRSIFQENHWEMVETVRDYSDNERVTLG 288 >gi|218708756|ref|YP_002416377.1| hypothetical protein VS_0753 [Vibrio splendidus LGP32] gi|218321775|emb|CAV17731.1| Protein hemK homolog [Vibrio splendidus LGP32] Length = 290 Score = 289 bits (741), Expect = 3e-76, Method: Composition-based stats. Identities = 87/266 (32%), Positives = 124/266 (46%), Gaps = 15/266 (5%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ LC ++ P+ L Q + R L E + I+G R+F+++ L Sbjct: 29 DATVLLCHALDKPRSYLLTWPEKHLTSEQESEFNTLLKRRLTGEPVAYIVGEREFWSLPL 88 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 +S T PRP+TE LV+ AL + ILDLGTGTGA+ LAL E P Sbjct: 89 KVSPSTLIPRPDTERLVEVALDKTY-----GKQGAILDLGTGTGAIALALASEMPNRPVT 143 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--------LFDVIVSNPPYIES 177 G+D+ +A ++A NA ++ L WF + F +IVSNPPYIE Sbjct: 144 GIDLRPEAQQLATENAQRLNIT-NATFLHGSWFEPLNSVNSEEKAVKFSLIVSNPPYIEK 202 Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237 +VR F+P +L GL+ R I++ L +G + E GY+Q + V Sbjct: 203 NDPHLSQGDVR-FEPITALVAEEKGLADIRYISENARSFLENEGWLAFEHGYDQGLAVRE 261 Query: 238 IFESRKLFLVNAFKDYGGNDRVLLFC 263 I ++ V KDYGGNDRV L Sbjct: 262 IMQALGYLDVVTEKDYGGNDRVTLGR 287 >gi|284047801|ref|YP_003398140.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Acidaminococcus fermentans DSM 20731] gi|283952022|gb|ADB46825.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Acidaminococcus fermentans DSM 20731] Length = 302 Score = 289 bits (740), Expect = 3e-76, Method: Composition-based stats. Identities = 98/265 (36%), Positives = 140/265 (52%), Gaps = 7/265 (2%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 D+ LC V S Q+ + D L++++ + R E + ILG + F Sbjct: 28 NPRLDAEVLLCAVLDKSRIQLYTNFDEPLEEQELKQYRGYVARRAAREPVAYILGHKGFL 87 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 ++ DT PRPETELLV+ ++ + R VRILDLG G+GA+ +LL E P Sbjct: 88 QYDFKVTKDTLIPRPETELLVEQLVSLNRDR----GPVRILDLGCGSGAIIDSLLAELPE 143 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVI 179 +G+GVDIS A + + NA + GV +R +T+ SD + V E F V+VSNPPYI Sbjct: 144 ARGMGVDISPGAAAVTRENAQSLGVGDRLETVVSDLYEKVPREEKFQVLVSNPPYIPEGD 203 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 + L EV +PR +LDGG DGL YR I + +L+ +G+ + EIG Q DV R+ Sbjct: 204 LAGLQAEVHR-EPRRALDGGRDGLDFYRRILRDLWSYLDPEGMAAFEIGQGQGEDVARLC 262 Query: 240 ESRKLFLVNAFKDYGGNDRVLLFCR 264 L V KDYG DR++ + Sbjct: 263 REAGLDCVKVRKDYGDMDRMVFAAK 287 >gi|84394466|ref|ZP_00993180.1| HemK protein [Vibrio splendidus 12B01] gi|84374907|gb|EAP91840.1| HemK protein [Vibrio splendidus 12B01] Length = 290 Score = 289 bits (740), Expect = 3e-76, Method: Composition-based stats. Identities = 87/266 (32%), Positives = 123/266 (46%), Gaps = 15/266 (5%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ LC ++ P+ L Q + R L E + I+G R+F+++ L Sbjct: 29 DAAVLLCHALDKPRSYLLTWPEKHLTSEQESEFHTLLKRRLTGEPVAYIVGEREFWSLPL 88 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 +S T PRP+TE LV+ AL + ILDLGTGTGA+ LAL E P Sbjct: 89 KVSPSTLIPRPDTERLVEVALDKTY-----GKQGAILDLGTGTGAIALALASEMPNRPVT 143 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--------LFDVIVSNPPYIES 177 G+D+ +A ++A NA ++ L WF + F +IVSNPPYIE Sbjct: 144 GIDLRPEAQQLATENAQRLNIT-NATFLHGSWFEPLNSASSEEEAVKFSLIVSNPPYIEK 202 Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237 +VR F+P +L GL+ R I++ L +G + E GY+Q + V Sbjct: 203 NDPHLSQGDVR-FEPITALVAEEKGLADIRYISENARDFLENEGWLAFEHGYDQGLAVRE 261 Query: 238 IFESRKLFLVNAFKDYGGNDRVLLFC 263 I + V KDYGGNDRV L Sbjct: 262 IMQQLGYLDVVTEKDYGGNDRVTLGR 287 >gi|320102130|ref|YP_004177721.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Isosphaera pallida ATCC 43644] gi|319749412|gb|ADV61172.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Isosphaera pallida ATCC 43644] Length = 319 Score = 289 bits (740), Expect = 3e-76, Method: Composition-based stats. Identities = 84/264 (31%), Positives = 145/264 (54%), Gaps = 3/264 (1%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 ++ L V + +Q+ + D V+ D R + + R + E ++G ++FY Sbjct: 53 PRLEAEVLLAHVLDHARYQLYMHIDDVVSDAARSAFRDLVKRRSEGEPSAYLVGRKEFYA 112 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + ++ PRP++E LV AL +L ++ R+ R+ D+GTG+G + +A+ + SP Sbjct: 113 LSFKVTPAVLIPRPDSEFLVIEALE-ALGKMVGRETPRLADVGTGSGCLAVAVARRSPQV 171 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIV 180 + V +D S +AL +A+ NA +GV++R D + D F + E FD+IVSNPPY+ + + Sbjct: 172 RIVAIDRSAEALAVARENAQAHGVADRIDFCEGDLFEPLDPEDRFDLIVSNPPYVATPVW 231 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 + L +++F+PR++LDGGIDGL R + D + L+ G ++EIG +Q V R+F Sbjct: 232 ETLEPTIKNFEPRLALDGGIDGLDVIRRLVDQAAVRLHPGGTLAMEIGSDQGEAVTRLFA 291 Query: 241 SRKLFLVNAFKDYGGNDRVLLFCR 264 +D+ G DRV+ R Sbjct: 292 GDLWSPPTIRRDHAGLDRVVTTRR 315 >gi|200389878|ref|ZP_03216489.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|199602323|gb|EDZ00869.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Salmonella enterica subsp. enterica serovar Virchow str. SL491] Length = 277 Score = 289 bits (740), Expect = 3e-76, Method: Composition-based stats. Identities = 92/259 (35%), Positives = 131/259 (50%), Gaps = 8/259 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 RD+ L VTG ++ ++ L D Q+ L + + R + E I + G R+F++ Sbjct: 20 PRRDAEILLEYVTGKGRTYIMAFGETPLTDVQQQQLADLLQRRKQGEPIAYLTGLREFWS 79 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +S T PRP+TE LV+ ALA RILDLGTGTGA+ LAL E P Sbjct: 80 LPLFVSPATLIPRPDTECLVEQALARL-----PVKTCRILDLGTGTGAIALALACERPDC 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181 + VD A+ +A NA + LQS WFS++ G FD+IVSNPPYI++ Sbjct: 135 EVTAVDRMPDAVALAIRNAEHLAIR-NVRILQSCWFSALSGQQFDMIVSNPPYIDAQDPH 193 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+PR +L +G++ I D + L G +E G+ Q V +F Sbjct: 194 LSEGDVR-FEPRSALVADENGMADLTHIIDNARQMLTPGGFLLLEHGWRQGEAVRAVFRR 252 Query: 242 RKLFLVNAFKDYGGNDRVL 260 V +DYGGN+RV Sbjct: 253 SGYSDVETCRDYGGNERVT 271 >gi|302671178|ref|YP_003831138.1| methyltransferase HemK [Butyrivibrio proteoclasticus B316] gi|302395651|gb|ADL34556.1| methyltransferase HemK [Butyrivibrio proteoclasticus B316] Length = 287 Score = 289 bits (740), Expect = 3e-76, Method: Composition-based stats. Identities = 91/244 (37%), Positives = 133/244 (54%), Gaps = 7/244 (2%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 +A D+ L V G ++ PD + D +R + I R HE + ILG +F Sbjct: 23 EAKLDARLLLEYVCGTDHSTLLAHPDKEVTDEERDKYLSMIDRRAAHEPVAYILGTWNFM 82 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 + ++SD P +TE+LV+ AL D +R+LDL TG+G + L+LL + Sbjct: 83 GLDFKVNSDVLIPEQDTEILVEEALRNL------EDGMRVLDLCTGSGCIALSLLNYTNE 136 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIV 180 + V DIS KAL +A NA G+S+R + +++D F G FD+IVSNPPYI S ++ Sbjct: 137 TRAVCTDISDKALAVAGMNAERLGLSDRTEFVRTDLFPEESVGKFDLIVSNPPYIASKVI 196 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 D L EVRD++PR++LDG DGL YR I + + L G +EIGY+Q V + E Sbjct: 197 DTLAPEVRDYEPRLALDGSEDGLVFYRRIIEETPKFLYSSGYLLLEIGYDQGQAVKEMLE 256 Query: 241 SRKL 244 +K Sbjct: 257 DKKY 260 >gi|302381613|ref|YP_003817436.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Brevundimonas subvibrioides ATCC 15264] gi|302192241|gb|ADK99812.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Brevundimonas subvibrioides ATCC 15264] Length = 294 Score = 289 bits (740), Expect = 3e-76, Method: Composition-based stats. Identities = 97/256 (37%), Positives = 144/256 (56%), Gaps = 5/256 (1%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L +G S ++ DP L Q+ L + R L+ E + RILG + F+ + L Sbjct: 29 DARLLLEAASGASRLDILTDPHRPLTPDQQAALAGYLERRLRREPVSRILGRKGFWKIML 88 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 ++ D PRP+T ++ L ++ E ++DLGTG+GA+ LA+L E P GV Sbjct: 89 NVTPDVLSPRPDT----ETILDVAMLAFEPAQAFNVIDLGTGSGAILLAVLSERPGSHGV 144 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLG 184 G DIS +AL +A+ NA G+ R L+++W + + FD++VSNPPYI S + L Sbjct: 145 GTDISSEALAVARENAANLGLDGRATFLRTEWAAGFGDASFDLVVSNPPYIPSGDIPGLD 204 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 EVRD DP ++LDGG DGL YR +A ++R L G+ +VEIG++Q V +FE+ L Sbjct: 205 PEVRDHDPVLALDGGPDGLQAYRDLAPEIARILKPGGVFAVEIGWDQGPQVKALFEAAGL 264 Query: 245 FLVNAFKDYGGNDRVL 260 V KD G RV+ Sbjct: 265 TDVKVVKDLGDRHRVV 280 >gi|50121118|ref|YP_050285.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Pectobacterium atrosepticum SCRI1043] gi|49611644|emb|CAG75093.1| protein methyltransferase [Pectobacterium atrosepticum SCRI1043] Length = 281 Score = 288 bits (739), Expect = 4e-76, Method: Composition-based stats. Identities = 88/262 (33%), Positives = 135/262 (51%), Gaps = 8/262 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 RD+ L VTG S ++ ++ L ++ LT + R + E I ++G R+F++ Sbjct: 20 PKRDAEILLGFVTGKSRTFLLAFGETELSAAEQQPLTELLARREQGEPIAYLIGVREFWS 79 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +S T PRP+TE LV+ AL + +LDLGTGTGA+ LAL E Sbjct: 80 LPLAVSPATLIPRPDTECLVEQALLRL-----PQTPCSVLDLGTGTGAIALALASERRDC 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181 + +GVD+ A+ +A NA + + L W+S +E F +IVSNPPYI+ V Sbjct: 135 RVIGVDLQPDAVALATKNAQQLKL-DNARFLPGSWYSPLEHMRFALIVSNPPYIDVDDVH 193 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P +L +GL+ R I + +L+ G +E G+ Q V R+ + Sbjct: 194 LAQGDVR-FEPASALIAADNGLADLRAIIESAPHYLDAGGWLLLEHGWQQGDAVRRLLQV 252 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 R + ++DYGGNDRV L Sbjct: 253 RGFTQIETYQDYGGNDRVSLGR 274 >gi|260467161|ref|ZP_05813339.1| modification methylase, HemK family [Mesorhizobium opportunistum WSM2075] gi|259029085|gb|EEW30383.1| modification methylase, HemK family [Mesorhizobium opportunistum WSM2075] Length = 292 Score = 288 bits (739), Expect = 4e-76, Method: Composition-based stats. Identities = 123/263 (46%), Positives = 158/263 (60%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 D+ + +G + Q I DP+ + R + A+ R E +HRILG+R+FY Sbjct: 27 DPTLDARLIVEHFSGTTRTQAIADPEFKVHGRAIETIDAALRRRAGGEPVHRILGYREFY 86 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 +RL+LS +T EPRP+TE LV++ L F + RILDLGTGTGA+ LALL P Sbjct: 87 GLRLSLSPETLEPRPDTETLVEAILPFVKAIAAREGACRILDLGTGTGAIALALLSAEPA 146 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181 GVDI+ AL A NA G+ RF LQSDWF V G + VI +NPPYI S + Sbjct: 147 ATATGVDIAPGALATATGNAGQLGLGGRFTALQSDWFEKVSGRYHVIAANPPYIPSQDIG 206 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 L EVRDFDPR++LDGG+DGL+ YR IA +R L +G +VEIG Q+ +V IF S Sbjct: 207 NLQDEVRDFDPRLALDGGVDGLNPYRIIAAEAARFLEAEGRVAVEIGRTQQDEVTDIFRS 266 Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264 LV AF+D GGNDRVL+F R Sbjct: 267 AGYGLVGAFRDLGGNDRVLVFQR 289 >gi|262166265|ref|ZP_06034002.1| Polypeptide chain release factor methylase [Vibrio mimicus VM223] gi|262025981|gb|EEY44649.1| Polypeptide chain release factor methylase [Vibrio mimicus VM223] Length = 286 Score = 288 bits (739), Expect = 4e-76, Method: Composition-based stats. Identities = 90/263 (34%), Positives = 128/263 (48%), Gaps = 9/263 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 D+ LC V ++ PD L++ L + + R + E + ILG R+F++ Sbjct: 24 PALDAAVLLCHVLAKPRSYLLTWPDKTLEEPALVSLNSLLTRRMAGEPVAYILGEREFWS 83 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +S T PRP+TE LV+ AL + +LDLGTGTGA+ LAL E P Sbjct: 84 LPLKVSPSTLIPRPDTERLVELALEKA-----ALIEGELLDLGTGTGAIALALASELPLR 138 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIV 180 + G+D+ +A E+A+ NA + LQ WFS + F +IVSNPPYIE Sbjct: 139 RVTGIDLRPEAAELAQENATRLSILNT-QFLQGSWFSPLADGTKFALIVSNPPYIEENDP 197 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 +VR F+P+ +L +GL+ R I+ R L + G E GY+Q V I Sbjct: 198 HLNQGDVR-FEPKSALVAEENGLADIRYISTHAPRFLLEGGWLLFEHGYDQGEAVRTILR 256 Query: 241 SRKLFLVNAFKDYGGNDRVLLFC 263 V +DY GNDRV L Sbjct: 257 ELGYQSVTTEQDYAGNDRVTLGQ 279 >gi|157145533|ref|YP_001452852.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Citrobacter koseri ATCC BAA-895] gi|157082738|gb|ABV12416.1| hypothetical protein CKO_01276 [Citrobacter koseri ATCC BAA-895] Length = 277 Score = 288 bits (739), Expect = 4e-76, Method: Composition-based stats. Identities = 89/262 (33%), Positives = 128/262 (48%), Gaps = 8/262 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 RD+ L VTG + ++ ++ L D QR L + R + E + + G R+F++ Sbjct: 20 PRRDAEILLGHVTGKARTFILAFGETALTDTQREQLAQLLARRQRGEPVAHLTGIREFWS 79 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +S T PRP+TE LV+ ALA RILDLGTGTGA+ LAL E P Sbjct: 80 LPLFVSPATLIPRPDTECLVEQALARL-----PDSPCRILDLGTGTGAIALALATERPDC 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181 + VD A+ +A NA + LQSDWF+++ G FD+IVSNPPYI++ Sbjct: 135 EVTAVDRMPDAVALAGRNAQHLAI-HNVRILQSDWFAALPGQQFDMIVSNPPYIDAHDPH 193 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P +L +G++ I L G +E G+ Q V V Sbjct: 194 LAQGDVR-FEPLSALVADDNGMADITHIIAQARHALAPGGYLLLEHGWQQGVAVRTALAQ 252 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 V +DYG N+R+ L Sbjct: 253 AGYVQVETCRDYGDNERITLGR 274 >gi|242239291|ref|YP_002987472.1| modification methylase, HemK family [Dickeya dadantii Ech703] gi|242131348|gb|ACS85650.1| modification methylase, HemK family [Dickeya dadantii Ech703] Length = 279 Score = 288 bits (739), Expect = 4e-76, Method: Composition-based stats. Identities = 91/261 (34%), Positives = 130/261 (49%), Gaps = 8/261 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 RD+ L VTG +I +++L D Q+ L + R E I + G ++F++ Sbjct: 20 PRRDAEILLGHVTGKRRTFLIAFGETLLSDDQQQMLEGLLTRRSAGEPIAYLTGEKEFWS 79 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +S T PRP+TE LV+ AL P+ + +LDLGTGTGA+ LA+ E P Sbjct: 80 LALEVSPATLIPRPDTECLVEQALQRLPPQ-----ALSVLDLGTGTGAIALAIASERPAC 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVD 181 +GVD A+ +A NA G+ L DWFSS+ E F +IVSNPPYI++ Sbjct: 135 DVLGVDCQPDAVTLATHNARRLGI-HNVRFLLGDWFSSLNEQRFSMIVSNPPYIDAADPH 193 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR ++P +L G GL+ R I L G +E G+ Q V +F Sbjct: 194 LNCGDVR-YEPASALVAGEHGLADLRHIVQYSRHFLLDGGWLLLEHGWLQGESVRELFWQ 252 Query: 242 RKLFLVNAFKDYGGNDRVLLF 262 V +DYGGN+RV L Sbjct: 253 YGFSQVETCRDYGGNERVSLG 273 >gi|238913675|ref|ZP_04657512.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] Length = 277 Score = 288 bits (739), Expect = 4e-76, Method: Composition-based stats. Identities = 92/257 (35%), Positives = 131/257 (50%), Gaps = 8/257 (3%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 RD+ L VTG ++ ++ L D Q+ L + + R + E I + G R+F+++ Sbjct: 22 RDAEILLEYVTGKGRTYIMAFGETPLTDVQQQQLADLLQRRKQGEPIAYLTGLREFWSLP 81 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L +S T PRP+TE LV+ ALA RILDLGTGTGA+ LAL E P + Sbjct: 82 LFVSPATLIPRPDTECLVEQALARL-----PVKTCRILDLGTGTGAIALALACERPDCEV 136 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCL 183 VD A+ +A NA + LQS WFS++ G FD+IVSNPPYI++ Sbjct: 137 TAVDRMPDAVALAIRNAEHLAIR-NVRILQSCWFSALSGQQFDMIVSNPPYIDAQDPHLS 195 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 +VR F+PR +L +G++ I D + L G +E G+ Q V +F Sbjct: 196 EGDVR-FEPRSALVADENGMADLTHIIDNARQMLTPGGFLLLEHGWRQGEAVRAVFRRSG 254 Query: 244 LFLVNAFKDYGGNDRVL 260 V +DYGGN+RV Sbjct: 255 YSDVETCRDYGGNERVT 271 >gi|148826785|ref|YP_001291538.1| hypothetical protein CGSHiGG_00160 [Haemophilus influenzae PittGG] gi|148718027|gb|ABQ99154.1| HemK [Haemophilus influenzae PittGG] Length = 292 Score = 288 bits (739), Expect = 4e-76, Method: Composition-based stats. Identities = 99/270 (36%), Positives = 148/270 (54%), Gaps = 12/270 (4%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 + D+ L TG S Q++ D+ +D++ R LT + R LK E I ILG ++F+ Sbjct: 22 NSKIDALVLLQHATGKSRTQILAFDDTEIDEKVRLKLTALLDRRLKGEPIAYILGEKEFW 81 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALLKESP 120 ++ L +S T PRP+TE LV+ AL +L ++E+ RILDLGTGTGA+ LAL E Sbjct: 82 SLPLNVSKGTLIPRPDTESLVEKALQIALEKLEENPPHFRILDLGTGTGAIALALASELA 141 Query: 121 FF--------KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNP 172 + +GVD+ + +A+SNA N + + LQS WF ++ G FD+IVSNP Sbjct: 142 PICQKRHIPLEIIGVDLMPDVVALAQSNAERNQL--NVEFLQSRWFDNITGKFDLIVSNP 199 Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232 PYI++ +VR F+P +L +G + R I + S +LN +G+ +E G+ Q Sbjct: 200 PYIDAQDEHLHQGDVR-FEPLSALVANDEGYADLRHIIELASSYLNSNGVLLLEHGWQQG 258 Query: 233 VDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262 V IF +V +DYG N+RV L Sbjct: 259 EKVRSIFLENYWEMVETVRDYGDNERVTLG 288 >gi|312172220|emb|CBX80477.1| K02493 methyltransferase [Erwinia amylovora ATCC BAA-2158] Length = 295 Score = 288 bits (739), Expect = 4e-76, Method: Composition-based stats. Identities = 90/263 (34%), Positives = 134/263 (50%), Gaps = 8/263 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 RD+ L VTG S +I DSVLD L + R E I + G R+F++ Sbjct: 20 PKRDAEILLQLVTGKSRAWLIGFDDSVLDAAALEQLHALLTRRAAGEPIAYLTGEREFWS 79 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L ++ DT PRP++E+LV+ ALA ILDLGTG+GA+ LAL E P Sbjct: 80 LSLNVTPDTLIPRPDSEVLVEQALAHL-----PDAACSILDLGTGSGAIALALASERPDC 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVD 181 + G+D A+ +A+ NA G++ + +WFS+++ F VIVSNPPYI++ Sbjct: 135 QISGIDRIPAAVALAQHNAARLGLA-NATFMPGNWFSALKPQQFAVIVSNPPYIDAADKH 193 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P +L G GL+ + IA ++L G +E G+ Q + +I Sbjct: 194 LSQGDVR-FEPASALVAGDGGLADIKIIAAQAGQYLANGGWLLLEHGWQQGAQIRQILSD 252 Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264 + +DYGGNDRV + Sbjct: 253 NHYCRIETCQDYGGNDRVTFGQK 275 >gi|15893237|ref|NP_360951.1| bifunctional N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase/tRNA (m7G46) methyltransferase [Rickettsia conorii str. Malish 7] gi|229587214|ref|YP_002845715.1| bifunctional N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase/tRNA (m7G46) methyltransferase [Rickettsia africae ESF-5] gi|32129602|sp|Q92G13|HEMK_RICCN RecName: Full=Bifunctional methyltransferase; Includes: RecName: Full=HemK protein homolog; AltName: Full=M.RcoHemKP; Includes: RecName: Full=tRNA (guanine-N(7)-)-methyltransferase; AltName: Full=tRNA(m7G46)-methyltransferase gi|15620455|gb|AAL03852.1| possible protoporphyrinogen oxidase [Rickettsia conorii str. Malish 7] gi|228022264|gb|ACP53972.1| Methylase of polypeptide chain release factors [Rickettsia africae ESF-5] Length = 524 Score = 288 bits (739), Expect = 5e-76, Method: Composition-based stats. Identities = 83/281 (29%), Positives = 134/281 (47%), Gaps = 21/281 (7%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 ++ L V ++++ D L++ + + R LKHE I I G ++FY+ Sbjct: 24 PQLEARILLQHVINKPIEYLLINLDEQLNEAKIEAFEKLLARRLKHEPIVYITGVKEFYS 83 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV--------------------VRIL 102 ++ PR +TE+LVD + + IL Sbjct: 84 REFIVNKHVLIPRSDTEVLVDVVFQCHSRESGNPEKKQPNPCFRGNDISENCNDKFLNIL 143 Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162 +LGTG+G + ++LL E P + DIS A++I KSNA V++R + S+WF ++E Sbjct: 144 ELGTGSGCIAISLLCELPNANVIATDISLDAIDIIKSNAAKYEVTDRIQIIHSNWFENIE 203 Query: 163 -GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221 FD IVSNPPYI + +E +++P I+L DGL Y IA+ + L +G Sbjct: 204 TQKFDFIVSNPPYIAHSEKSEMAIETINYEPSIALFAEKDGLQAYFLIAENAKQFLKPNG 263 Query: 222 LCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262 +EIG+ Q+ V +IF + + +KD G+ RV+LF Sbjct: 264 KIILEIGFKQEEAVTQIFLDHGYNIESVYKDLQGHSRVILF 304 >gi|237807597|ref|YP_002892037.1| modification methylase, HemK family [Tolumonas auensis DSM 9187] gi|237499858|gb|ACQ92451.1| modification methylase, HemK family [Tolumonas auensis DSM 9187] Length = 282 Score = 288 bits (738), Expect = 5e-76, Method: Composition-based stats. Identities = 91/258 (35%), Positives = 127/258 (49%), Gaps = 7/258 (2%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A D+ LC V + + P+ L Q + VR + E + ILG R+F++ Sbjct: 20 AALDADCLLCAVLSCTRTYLRTWPEQELTPEQVAQVEQFAVRREQGEPVAYILGVREFWS 79 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +S T PRP+TE LV+ AL E+ + LDLGTGTGA+ LAL E P Sbjct: 80 LPLQVSPATLIPRPDTEALVEWALTLL---SEQGQGQKALDLGTGTGAIALALKSEFPAL 136 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181 ++ AL++A+ NA G S F L S+WFS++ F +IVSNPPYI++ Sbjct: 137 AMWALEREPAALDLARRNAARLGFSVNF--LASNWFSALNERNFQLIVSNPPYIDAADPH 194 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P +L DGL+ R I D +L G +E G+ Q V + S Sbjct: 195 LAQGDVR-FEPHSALVADEDGLADIRQIIDQAPEYLAAGGWLLLEHGWQQAEAVRDLLSS 253 Query: 242 RKLFLVNAFKDYGGNDRV 259 R V D GG DRV Sbjct: 254 RGFQAVTTKSDLGGQDRV 271 >gi|168241357|ref|ZP_02666289.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|194447419|ref|YP_002045818.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194405723|gb|ACF65942.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|205339433|gb|EDZ26197.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] Length = 277 Score = 288 bits (738), Expect = 5e-76, Method: Composition-based stats. Identities = 92/259 (35%), Positives = 131/259 (50%), Gaps = 8/259 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 RD+ L VTG ++ ++ L D Q+ L + + R + E I + G R+F++ Sbjct: 20 PRRDAEILLEYVTGKGRTYIMAFGETPLTDVQQQQLADLLQRRKQGEPIAYLTGLREFWS 79 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +S T PRP+TE LV+ ALA RILDLGTGTGA+ LAL E P Sbjct: 80 LPLFVSPATLIPRPDTECLVEQALARL-----PVKTCRILDLGTGTGAIALALACERPDC 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181 + VD A+ +A NA + LQS WFS++ G FD+IVSNPPYI++ Sbjct: 135 EVTAVDRMPDAVALAIRNAEHLAIR-NVRILQSCWFSALSGQQFDMIVSNPPYIDAQDPH 193 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+PR +L +G++ I D + L G +E G+ Q V +F Sbjct: 194 LSEGDVR-FEPRSALVADENGMADLTHIIDNARQMLTPGGFLLLEHGWRQGEAVRAVFRR 252 Query: 242 RKLFLVNAFKDYGGNDRVL 260 V +DYGGN+RV Sbjct: 253 FGYTDVETCRDYGGNERVT 271 >gi|270261429|ref|ZP_06189702.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Serratia odorifera 4Rx13] gi|270044913|gb|EFA18004.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Serratia odorifera 4Rx13] Length = 277 Score = 288 bits (738), Expect = 5e-76, Method: Composition-based stats. Identities = 85/262 (32%), Positives = 129/262 (49%), Gaps = 8/262 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A RD+ L VTG + ++ ++VL +++ L + R + E + ++G R+F++ Sbjct: 20 ARRDAEILLGFVTGRARTFLMAFGETVLTPQEQEQLERLLARRERGEPVAYLIGEREFWS 79 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L++S T PRP+TE LV+ AL P ILDLGTGTGA+ LAL E P Sbjct: 80 LPLSVSPATLIPRPDTECLVELALERLPP-----SPCTILDLGTGTGAIALALASERPDC 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181 GVD+ +A+ +A+ NA + LQ WF + G F +I SNPPYI++ Sbjct: 135 AVTGVDLQPEAVALAQHNAQKLAIG-NAQFLQGSWFEPLAGQTFVLIASNPPYIDAADPH 193 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P +L GL+ I +L G +E G+ Q V + ++ Sbjct: 194 LAQGDVR-FEPSSALVAQQHGLADLAAIVQQAPHYLQPQGWLLLEHGWQQGESVRALLQA 252 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 V +DYG NDRV Sbjct: 253 AGFISVATRRDYGDNDRVTFGQ 274 >gi|20806671|ref|NP_621842.1| rRNA or tRNA methylase [Thermoanaerobacter tengcongensis MB4] gi|20515121|gb|AAM23446.1| predicted rRNA or tRNA methylase [Thermoanaerobacter tengcongensis MB4] Length = 285 Score = 288 bits (738), Expect = 5e-76, Method: Composition-based stats. Identities = 85/264 (32%), Positives = 130/264 (49%), Gaps = 9/264 (3%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 +S L + ++ + D VL + + I + I+ + F Sbjct: 26 NPRLESELLLSHSLRIDRVKLAIKRDEVLKEEELERFLKYIEKRKSRIPYQYIVKKQHFM 85 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 + PRPETE+LV+ AL + ILD+GTG+GA+ +++ K P Sbjct: 86 GFEFYVDERVLIPRPETEILVEEALKRM------KSGDLILDIGTGSGAIAISIAKLFPD 139 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVI 179 K VD+S +ALE+AK NA GV+E+ ++SD FS++ FD+IVSNPPYI+ Sbjct: 140 CKVYAVDVSEEALEVAKYNAEKLGVAEKIIFIKSDIFSNIPQDVKFDLIVSNPPYIKKAE 199 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 ++ L EV+ +P ++LDGG DGL Y+ I +L K G EIGY Q+ +V +IF Sbjct: 200 LENLQEEVKK-EPILALDGGEDGLFFYKRIIPDCKFYLKKGGRGLFEIGYGQREEVEKIF 258 Query: 240 ESRKLFLVNAFKDYGGNDRVLLFC 263 + KD DRV++ Sbjct: 259 LENGFDEIEVIKDLAHIDRVIIGR 282 >gi|332532478|ref|ZP_08408356.1| methylase of polypeptide chain release factors [Pseudoalteromonas haloplanktis ANT/505] gi|332038121|gb|EGI74568.1| methylase of polypeptide chain release factors [Pseudoalteromonas haloplanktis ANT/505] Length = 279 Score = 288 bits (738), Expect = 6e-76, Method: Composition-based stats. Identities = 88/261 (33%), Positives = 129/261 (49%), Gaps = 8/261 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A D+ L + + P+ L D Q+ I R LK E + I G R+F++ Sbjct: 23 AKLDAQVLLLHILQKPRSYLFTWPEHALSDEQQSQFNVFIQRRLKGEPVAHITGLREFWS 82 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +++ T PRP+TE LV+ AL +LP ++LDLGTGTGA+ LAL E P + Sbjct: 83 LSLEVNATTLIPRPDTETLVEQALEIALPA-----TAKVLDLGTGTGAIALALGSEMPSW 137 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181 + VD A+ +A N + QS+WFS + G F++IV+NPPYIES + Sbjct: 138 QITAVDRVSDAVALATRNQQRLAI-NNVHVKQSNWFSELHGEKFNLIVTNPPYIESSDIH 196 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P +L G+S + I +L+ +G +E G+ Q V FE Sbjct: 197 LNQGDVR-FEPLSALVADDCGMSDIKQIITQSRDYLSSNGYLLIEHGFEQGEAVRHFFEK 255 Query: 242 RKLFLVNAFKDYGGNDRVLLF 262 + KD G NDRV L Sbjct: 256 MAFVNIKTVKDLGNNDRVTLA 276 >gi|324113972|gb|EGC07946.1| protein-(glutamine-N5) methyltransferase [Escherichia fergusonii B253] Length = 276 Score = 288 bits (738), Expect = 6e-76, Method: Composition-based stats. Identities = 91/262 (34%), Positives = 127/262 (48%), Gaps = 8/262 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 RD+ L VTG ++ ++ L D Q L + R E I + G R+F++ Sbjct: 20 PRRDAEILLEYVTGRGRTFILAFGETQLTDEQLQQLDALLARRRAGEPIAHLTGQREFWS 79 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +S T PRP+TE LV+ AL RILDLGTGTGA+ LAL E P Sbjct: 80 LPLFVSPATLIPRPDTECLVEQALERL-----PEQPCRILDLGTGTGAIALALASERPDC 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181 + VD A+ +A+ NA + LQSDWFS++ G F +IVSNPPYI+ Sbjct: 135 EITAVDRMPDAVALAQRNAQHLAIK-NIHILQSDWFSALAGQQFAMIVSNPPYIDEQDPH 193 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P +L G G++ I + L K G +E G+ Q V + F Sbjct: 194 LQQGDVR-FEPLTALVAGDHGMADIVHIIEHSRAALAKGGYLLLEHGWQQGTAVRQAFIQ 252 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 V +DYGGN+R+ L Sbjct: 253 AGYSNVETCRDYGGNERITLGR 274 >gi|261493249|ref|ZP_05989776.1| protein-glutamine N-methyltransferase [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261311099|gb|EEY12275.1| protein-glutamine N-methyltransferase [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 417 Score = 288 bits (738), Expect = 6e-76, Method: Composition-based stats. Identities = 94/262 (35%), Positives = 143/262 (54%), Gaps = 4/262 (1%) Query: 1 MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60 + A D++ L VT S + ++VL +R+ L + R K E + ILG+R+F Sbjct: 153 LNAKFDANLLLQAVTKRSKSAIFAFSETVLSERELVELAEKLARRAKGEPMAYILGYREF 212 Query: 61 YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES- 119 +++ L +S T PRP+TE LV+ AL ++ R+E + +++ILDLGTGTGA+ LAL E Sbjct: 213 WSLPLKVSPATLIPRPDTERLVELALEYANKRLENQKMLQILDLGTGTGAIALALASELG 272 Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESV 178 + +GVD +A+++A+ N G+ + LQSDWFSS+ FD+IVSNPPYI+ Sbjct: 273 EKAQIIGVDFQNEAVQLAEENRQHLGL-NQVTFLQSDWFSSLANQQFDLIVSNPPYIDEA 331 Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238 + +VR F+P +L GLS + I +L G +E + Q V + Sbjct: 332 DENLTVGDVR-FEPLTALVADNKGLSDLQKIIQNAPLYLKPQGALMLEHSWQQGNAVRDL 390 Query: 239 FESRKLFLVNAFKDYGGNDRVL 260 F+ V +DY GNDRV Sbjct: 391 FDLNLWEQVETAQDYAGNDRVT 412 >gi|218549097|ref|YP_002382888.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia fergusonii ATCC 35469] gi|218356638|emb|CAQ89264.1| N5-glutamine methyltransferase, modifies release factors RF-1 and RF-2 [Escherichia fergusonii ATCC 35469] gi|325497512|gb|EGC95371.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia fergusonii ECD227] Length = 276 Score = 288 bits (738), Expect = 6e-76, Method: Composition-based stats. Identities = 90/262 (34%), Positives = 127/262 (48%), Gaps = 8/262 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 RD+ L VTG ++ ++ L D Q L + R E + + G R+F++ Sbjct: 20 PRRDAEILLEYVTGRGRTFILAFGETQLTDEQLQQLDALLARRRAGEPVAHLTGQREFWS 79 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +S T PRP+TE LV+ AL RILDLGTGTGA+ LAL E P Sbjct: 80 LPLFVSPATLIPRPDTECLVEQALERL-----PEQPCRILDLGTGTGAIALALASERPDC 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181 + VD A+ +A+ NA + LQSDWFS++ G F +IVSNPPYI+ Sbjct: 135 EITAVDRMPDAVALAQRNAQHLAIK-NIHILQSDWFSALAGQQFAMIVSNPPYIDEQDPH 193 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P +L G G++ I + L K G +E G+ Q V + F Sbjct: 194 LQQGDVR-FEPLTALVAGDHGMADIVHIIEHSRAALAKGGYLLLEHGWQQGAAVRQAFIQ 252 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 V +DYGGN+R+ L Sbjct: 253 AGYSNVETCRDYGGNERITLGR 274 >gi|323492376|ref|ZP_08097529.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Vibrio brasiliensis LMG 20546] gi|323313423|gb|EGA66534.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Vibrio brasiliensis LMG 20546] Length = 286 Score = 288 bits (737), Expect = 6e-76, Method: Composition-based stats. Identities = 90/261 (34%), Positives = 126/261 (48%), Gaps = 9/261 (3%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 D+ LC ++ PD +L Q + R L E + I+G R+F+++ Sbjct: 28 LDAAVLLCHALDKPRSFLLTWPDKILPSSQLDAFQALLERRLSGEPVAYIVGEREFWSLP 87 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L +S T PRP+TE LV+ AL +L + ILDLGTGTGA+ LAL E P + Sbjct: 88 LKVSPSTLIPRPDTERLVEIALDKAL-----NNQGDILDLGTGTGAIALALASELPQRQI 142 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDC 182 GVD+ +A ++A+SNA + L WF ++ F +IVSNPPYIE Sbjct: 143 WGVDLKSEAQQLAQSNAKALKL-HNTRFLAGSWFEPIDDGTEFALIVSNPPYIEKEDPHL 201 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 +VR F+P +L GL+ + IA +L K G E GY Q V + S Sbjct: 202 TRGDVR-FEPLSALVADEKGLADIKHIATQARSYLAKQGWLMFEHGYEQGEAVRELLISL 260 Query: 243 KLFLVNAFKDYGGNDRVLLFC 263 V +KDYG NDRV + Sbjct: 261 GYDQVATYKDYGDNDRVTIGQ 281 >gi|192359316|ref|YP_001981173.1| methyltransferase, HemK family [Cellvibrio japonicus Ueda107] gi|190685481|gb|ACE83159.1| methyltransferase, HemK family [Cellvibrio japonicus Ueda107] Length = 265 Score = 288 bits (737), Expect = 6e-76, Method: Composition-based stats. Identities = 89/262 (33%), Positives = 131/262 (50%), Gaps = 4/262 (1%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 D LC + + + PD +L D + R E I I+G R+F++ Sbjct: 5 PRLDIELILCHLLQKNRTWLYTWPDHLLADESLRQFETCLARRETGEPIAHIIGEREFWS 64 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +++ T PRP+TE++V+ LA S V R LDLGTGTGA+ LAL E + Sbjct: 65 LPLLVNNSTLIPRPDTEVVVEQVLA-SFAEDAPTQVRRCLDLGTGTGAIALALANEKKHW 123 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181 + + VD S A+ +A++N + L SDWFS++ FDVIVSNPPYI+ Sbjct: 124 QVLAVDRSADAVALARTNVARLRLP-NVQVLCSDWFSAIPAQTFDVIVSNPPYIDPQDPH 182 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+PR +L G GL+ I + +L G +E GY+Q V +F + Sbjct: 183 LEQGDVR-FEPRSALVAGNAGLADIEAILEQAPAYLAVGGWLLIEHGYDQGRAVRNLFCA 241 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 L V+ +DY GN+RV Sbjct: 242 SGLVQVSTRRDYAGNERVTFGQ 263 >gi|34581095|ref|ZP_00142575.1| possible protoporphyrinogen oxidase [Rickettsia sibirica 246] gi|28262480|gb|EAA25984.1| possible protoporphyrinogen oxidase [Rickettsia sibirica 246] Length = 524 Score = 288 bits (737), Expect = 6e-76, Method: Composition-based stats. Identities = 83/281 (29%), Positives = 134/281 (47%), Gaps = 21/281 (7%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 ++ L V ++++ D L++ + + R LKHE I I G ++FY+ Sbjct: 24 PQLEARILLQHVINKPIEYLLINLDEQLNEAKIEAFEKLLARRLKHEPIVYITGVKEFYS 83 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV--------------------VRIL 102 ++ PR +TE+LVD + + IL Sbjct: 84 REFIVNKHVLIPRSDTEVLVDVVFQCHSHESGNPEKKQPNPCFRGNDISENCNDKFLNIL 143 Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162 +LGTG+G + ++LL E P + DIS A++I KSNA V++R + S+WF ++E Sbjct: 144 ELGTGSGCIAISLLCELPHANVIATDISLDAIDIIKSNAAKYEVTDRIQIIHSNWFENIE 203 Query: 163 -GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221 FD IVSNPPYI + +E +++P I+L DGL Y IA+ + L +G Sbjct: 204 TQKFDFIVSNPPYIAHSEKSEMAIETINYEPSIALFAEKDGLQAYFLIAENAKQFLKPNG 263 Query: 222 LCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262 +EIG+ Q+ V +IF + + +KD G+ RV+LF Sbjct: 264 KIILEIGFKQEEAVTQIFLDHGYNIESVYKDLQGHSRVILF 304 >gi|157829147|ref|YP_001495389.1| bifunctional N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase/tRNA (m7G46) methyltransferase [Rickettsia rickettsii str. 'Sheila Smith'] gi|165933876|ref|YP_001650665.1| bifunctional N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase/tRNA (m7G46) methyltransferase [Rickettsia rickettsii str. Iowa] gi|157801628|gb|ABV76881.1| bifunctional N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase/tRNA (m7G46) methyltransferase [Rickettsia rickettsii str. 'Sheila Smith'] gi|165908963|gb|ABY73259.1| peptide release factor-glutamine N5-methyltransferase [Rickettsia rickettsii str. Iowa] Length = 524 Score = 288 bits (737), Expect = 7e-76, Method: Composition-based stats. Identities = 85/281 (30%), Positives = 136/281 (48%), Gaps = 21/281 (7%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 ++ L V ++++ D L++ + + R LKHE I I G ++FY+ Sbjct: 24 PQLEARILLQHVINKPIEYLLINLDEQLNEAKIEAFEKLLARRLKHEPIVYITGVKEFYS 83 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFS-----LPRIEKRDV---------------VRIL 102 ++ PR +TE+LVD P ++ D + IL Sbjct: 84 REFIVNKHVLIPRSDTEVLVDVVFQCHSRESGNPEKKQPDPCFRGNDISKNCNDKFLNIL 143 Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162 +LGTG+G + ++LL E P V DIS A++I KSNA V++R + S+WF ++E Sbjct: 144 ELGTGSGCIAISLLCELPNANVVATDISLDAIDIIKSNAAKYEVTDRIQIIHSNWFENIE 203 Query: 163 -GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221 FD IVSNPPYI + +E +++P I+L DGL Y IA+ + L +G Sbjct: 204 TQKFDFIVSNPPYIAHSEKSEMAIETINYEPSIALFAEKDGLQAYFLIAENAKQFLKPNG 263 Query: 222 LCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262 +EIG+ Q+ V +IF + + +KD G+ RV+L Sbjct: 264 KIILEIGFKQEEAVTQIFLDHGYNIESVYKDLQGHSRVILL 304 >gi|115375811|ref|ZP_01463063.1| methyltransferase, HemK family [Stigmatella aurantiaca DW4/3-1] gi|310822928|ref|YP_003955286.1| hypothetical protein STAUR_5696 [Stigmatella aurantiaca DW4/3-1] gi|115367199|gb|EAU66182.1| methyltransferase, HemK family [Stigmatella aurantiaca DW4/3-1] gi|309396000|gb|ADO73459.1| conserved uncharacterized protein [Stigmatella aurantiaca DW4/3-1] Length = 292 Score = 288 bits (737), Expect = 7e-76, Method: Composition-based stats. Identities = 83/259 (32%), Positives = 122/259 (47%), Gaps = 7/259 (2%) Query: 7 SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66 + L + ++ VD D L + I R + E + G ++FYN Sbjct: 30 AEVLLAHLLKTGRVRLYVDLDRPLSKEELAAYRALIERRMAGEPTQYLTGAKEFYNRPFK 89 Query: 67 LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126 + + PRPETELLV++AL + K LD+ G+G + ++L E P + Sbjct: 90 VDARVLIPRPETELLVEAALR----ALPKDAPSHALDVCAGSGCIAISLAAERPQTSVLA 145 Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVDCLG 184 D+S A +A+ NA T GVS R LQ D F+ V + F ++VSNPPYI S + L Sbjct: 146 TDLSPGACALARENAETLGVSSRVTFLQGDLFAPVPADARFALVVSNPPYIASGEIPGLS 205 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 +EVR +P ++LDGG DGL R + G R+L GL ++EIG Q V + + Sbjct: 206 VEVRR-EPHLALDGGRDGLDLIRRVIQGARRYLAPGGLLAMEIGETQGAAVKELLHAAGY 264 Query: 245 FLVNAFKDYGGNDRVLLFC 263 KD DR+ Sbjct: 265 SDARVEKDLERRDRLAFGT 283 >gi|205352557|ref|YP_002226358.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205272338|emb|CAR37218.1| HemK protein, putative protoporphyrinogen oxidase [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|326627617|gb|EGE33960.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 277 Score = 288 bits (737), Expect = 7e-76, Method: Composition-based stats. Identities = 92/259 (35%), Positives = 131/259 (50%), Gaps = 8/259 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 RD+ L VTG ++ ++ L D Q+ L + + R + E I + G R+F++ Sbjct: 20 PRRDAEILLEYVTGKGRTYIMAFGETPLTDVQQQQLADLLQRRKQGEPIAYLTGLREFWS 79 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +S T PRP+TE LV+ ALA RILDLGTGTGA+ LAL E P Sbjct: 80 LPLFVSPATLIPRPDTECLVEQALARL-----PVKTCRILDLGTGTGAIALALACERPDC 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181 + VD A+ +A NA + LQS WFS++ G FD+IVSNPPYI++ Sbjct: 135 EVTAVDRMPDAVALAIRNAEHLAIR-NVRILQSCWFSALSGQQFDMIVSNPPYIDAQDPH 193 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+PR +L +G++ I D + L G +E G+ Q V +F Sbjct: 194 LSEGDVR-FEPRSALVADENGMADLTHIIDNARQMLTPSGFLLLEHGWQQGEAVRAVFRR 252 Query: 242 RKLFLVNAFKDYGGNDRVL 260 V +DYGGN+RV Sbjct: 253 SGYSDVETCRDYGGNERVT 271 >gi|292488089|ref|YP_003530966.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Erwinia amylovora CFBP1430] gi|292899300|ref|YP_003538669.1| protein methyltransferase [Erwinia amylovora ATCC 49946] gi|291199148|emb|CBJ46262.1| protein methyltransferase [Erwinia amylovora ATCC 49946] gi|291553513|emb|CBA20558.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Erwinia amylovora CFBP1430] Length = 281 Score = 288 bits (737), Expect = 7e-76, Method: Composition-based stats. Identities = 90/263 (34%), Positives = 134/263 (50%), Gaps = 8/263 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 RD+ L VTG S +I DSVLD L + R E I + G R+F++ Sbjct: 20 PKRDAEILLQLVTGKSRAWLIGFDDSVLDAAALEQLHALLTRRAAGEPIAYLTGEREFWS 79 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L ++ DT PRP++E+LV+ ALA ILDLGTG+GA+ LAL E P Sbjct: 80 LSLNVTPDTLIPRPDSEVLVEQALAHL-----PDAACSILDLGTGSGAIALALASERPDC 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVD 181 + G+D A+ +A+ NA G++ + +WFS+++ F VIVSNPPYI++ Sbjct: 135 QISGIDRIPAAVALAQHNAARLGLA-NATFMPGNWFSALKPQQFAVIVSNPPYIDAADKH 193 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P +L G GL+ + IA ++L G +E G+ Q + +I Sbjct: 194 LSQGDVR-FEPASALVAGDGGLADIKIIAAQAGQYLANGGWLLLEHGWQQGAQIRQILSD 252 Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264 + +DYGGNDRV + Sbjct: 253 NHYCRIETCQDYGGNDRVTFGQK 275 >gi|238917366|ref|YP_002930883.1| HemK protein [Eubacterium eligens ATCC 27750] gi|238872726|gb|ACR72436.1| HemK protein [Eubacterium eligens ATCC 27750] Length = 279 Score = 288 bits (737), Expect = 7e-76, Method: Composition-based stats. Identities = 89/265 (33%), Positives = 131/265 (49%), Gaps = 9/265 (3%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 A DS L + G++ +++ DS+L + I + H + ILG FY Sbjct: 22 NAEHDSFELLSAINGMTRTFYLINGDSLLSEENFLMFEEYIEQRASHIPLQHILGKTWFY 81 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 ++SD PR +TE+LV + + R ILD+ TG+G + + L K+ P Sbjct: 82 GYEYMVNSDVLIPRQDTEILVGEVIKVT------RSGDYILDMCTGSGCIGITLAKKFPE 135 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVI 179 + +GVD+S KAL +A+SN N +E D ++SD F + F+ IVSNPPYI + + Sbjct: 136 CRVLGVDVSEKALNVAQSN-KHNLEAENIDFMRSDLFEELNHDITFNTIVSNPPYIPTKV 194 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 ++ L EVR DP ++LDG DGL YR I L DG EIG Q DV I Sbjct: 195 IEGLQEEVRLHDPILALDGMEDGLMFYRKITAQAGDFLETDGYLCYEIGAEQAADVSDIM 254 Query: 240 ESRKLFLVNAFKDYGGNDRVLLFCR 264 + + KD G DRV++ + Sbjct: 255 KKAGFKDITVVKDLAGFDRVVMGRK 279 >gi|254429562|ref|ZP_05043269.1| methyltransferase, HemK family [Alcanivorax sp. DG881] gi|196195731|gb|EDX90690.1| methyltransferase, HemK family [Alcanivorax sp. DG881] Length = 275 Score = 288 bits (737), Expect = 7e-76, Method: Composition-based stats. Identities = 85/261 (32%), Positives = 125/261 (47%), Gaps = 8/261 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A D+ LC V G + P+ L Q+ T+ + + E + ++G R+F+ Sbjct: 20 AALDAELLLCHVLGKPRSYLFTWPERELSTAQQADFTSLLGHRVAGEPVAHLIGEREFFG 79 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 +++DT PRP+TE LV+ AL+ +P R++DLGTGTGA+ ++L P + Sbjct: 80 HLFRVTADTLIPRPDTETLVEKALSLDVPA-----EARVVDLGTGTGAIGVSLALARPDW 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182 VD+S AL++A NA G + LQ W S G FD+IVSNPPYIE Sbjct: 135 HVTLVDLSEAALQVAADNAHRLGAA--VTCLQGSWLSPCPGPFDLIVSNPPYIEESDHHL 192 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 +VR F+PR +L +GL+ I + L G +E G+ Q V + Sbjct: 193 DEGDVR-FEPRSALVAPNNGLADLAAITQQAAGKLVAGGWLLLEHGFEQGEAVRTLLTQA 251 Query: 243 KLFLVNAFKDYGGNDRVLLFC 263 V +D GGNDRV Sbjct: 252 GFVQVGTAQDLGGNDRVTFGQ 272 >gi|148981992|ref|ZP_01816580.1| HemK protein [Vibrionales bacterium SWAT-3] gi|145960680|gb|EDK26024.1| HemK protein [Vibrionales bacterium SWAT-3] Length = 290 Score = 288 bits (737), Expect = 7e-76, Method: Composition-based stats. Identities = 87/266 (32%), Positives = 124/266 (46%), Gaps = 15/266 (5%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ LC ++ P++ L Q + R L E + I+G R+F+++ L Sbjct: 29 DAAVLLCHALDKPRSYLLTWPETHLTSEQESEFQALLKRRLTGEPVAYIVGEREFWSLPL 88 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 +S T PRP+TE LV+ AL + ILDLGTGTGA+ LAL E P Sbjct: 89 KVSPSTLIPRPDTERLVEVALDKTY-----GKQGAILDLGTGTGAIALALASEMPNRPVT 143 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--------LFDVIVSNPPYIES 177 G+D+ +A +A NA ++ L WF + G F +IVSNPPYIE Sbjct: 144 GIDLRPEAQALATENAKRLNIT-NATFLHGSWFDPLSGLASDGDEVKFSLIVSNPPYIEK 202 Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237 +VR F+P +L GL+ R I++ L +G + E GY+Q + V Sbjct: 203 DDPHLSQGDVR-FEPITALVAEEKGLADIRYISENARGFLEDEGWLAFEHGYDQGLAVRE 261 Query: 238 IFESRKLFLVNAFKDYGGNDRVLLFC 263 I ++ V KDY GNDRV L Sbjct: 262 IMQTLGYLDVVTEKDYCGNDRVTLGR 287 >gi|152984205|ref|YP_001350645.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Pseudomonas aeruginosa PA7] gi|150959363|gb|ABR81388.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Pseudomonas aeruginosa PA7] Length = 276 Score = 288 bits (737), Expect = 7e-76, Method: Composition-based stats. Identities = 86/262 (32%), Positives = 130/262 (49%), Gaps = 8/262 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A D+ L G + P+ ++ + I R E + ILG + F++ Sbjct: 19 ARLDTELLLAAAMGKPRSFLRTWPERIVPREANELFDDWIARRRNGEPVAYILGHQGFWS 78 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L ++ T PRP+TELLV++ALA D +LDLGTGTGA+ LAL E P + Sbjct: 79 LDLEVAPHTLIPRPDTELLVETALATL-----AADSATVLDLGTGTGAIALALASERPLW 133 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181 VD +A+ +A+ N + E + S WFS+++G F +IV NPPYI + Sbjct: 134 TVTAVDRVEEAVALAERNRQRL-LLENVEVCHSHWFSALDGRRFRMIVGNPPYIPASDPH 192 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P+ +L G DGL R I + R+L +G +E GY+Q V + + Sbjct: 193 LSEGDVR-FEPKSALVAGNDGLDDIRQIVEQAPRYLLAEGWLLLEHGYDQGAAVRDLLGA 251 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 R V +D GGN+R+ L Sbjct: 252 RGFAGVRTLRDLGGNERITLGQ 273 >gi|251789677|ref|YP_003004398.1| modification methylase, HemK family [Dickeya zeae Ech1591] gi|247538298|gb|ACT06919.1| modification methylase, HemK family [Dickeya zeae Ech1591] Length = 283 Score = 288 bits (737), Expect = 8e-76, Method: Composition-based stats. Identities = 87/262 (33%), Positives = 128/262 (48%), Gaps = 8/262 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 RD+ L +TG ++ ++ L D + L + + R + E I ++G+R+F++ Sbjct: 20 PKRDAEILLEHITGKGRTFLLAFGETELMDSEYQTLESLLARRVTGEPIAYLIGYREFWS 79 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +S T PRP+TE LV+ ALA ++DLGTGTGA+ LA+ E P Sbjct: 80 LPLAVSPVTLIPRPDTECLVEHALAHL-----PAGASSVVDLGTGTGAIALAIAHERPDC 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181 + VGVD A+ +A NA + L DWFS + G F +IVSNPPYI+ Sbjct: 135 RVVGVDRQHDAVVLASHNARRLEI-NNAQFLPGDWFSPLAGQRFSLIVSNPPYIDEHDPH 193 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P +L DGL+ R I L DG +E G+ Q V + Sbjct: 194 LSRGDVR-FEPASALVAAEDGLADLRQIIRQAGTFLLDDGWLLLEHGWQQGQAVRALLSQ 252 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 V ++DYG N+RV L Sbjct: 253 YGFAQVKTYRDYGDNERVTLGQ 274 >gi|158520490|ref|YP_001528360.1| HemK family modification methylase [Desulfococcus oleovorans Hxd3] gi|158509316|gb|ABW66283.1| modification methylase, HemK family [Desulfococcus oleovorans Hxd3] Length = 297 Score = 288 bits (737), Expect = 8e-76, Method: Composition-based stats. Identities = 95/271 (35%), Positives = 139/271 (51%), Gaps = 8/271 (2%) Query: 1 MQALRD-SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRD 59 ++A R + L V G+ + + D L + + I R E + ILG + Sbjct: 26 VEAPRVSAELLLAHVLGIKRLDLYLRYDQPLTPDELAAFRSLISRRKAGEPVAYILGEKA 85 Query: 60 FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR-ILDLGTGTGAVCLALLKE 118 F+++ L ++ D PRP+TE LV++AL+F R +L+ TG+GAV LAL K Sbjct: 86 FWSMDLVVTPDVLIPRPDTECLVETALSFLAGPGSDTPAERWVLEPATGSGAVVLALAKS 145 Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV----EGLFDVIVSNPPY 174 P + D S AL +A+ NAV + R SDWFS++ G FD+IV+NPPY Sbjct: 146 HPGCRFFAFDRSTAALAVARKNAVRYDPAHRVVFFASDWFSALGNSASGRFDMIVANPPY 205 Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234 + S +D L E+ F+PR++LDGG DGL R I R L G +EIG++QK Sbjct: 206 VASGDIDHLAPEI-GFEPRMALDGGADGLDPVRHILQAAGRFLKPGGRLLIEIGWDQKER 264 Query: 235 VVRIFESRKLFL-VNAFKDYGGNDRVLLFCR 264 V ++ E L+ V KD G+ RV+ R Sbjct: 265 VAQVTEQAGLYTAVGFAKDLAGHHRVVHMQR 295 >gi|117926779|ref|YP_867396.1| HemK family modification methylase [Magnetococcus sp. MC-1] gi|117610535|gb|ABK45990.1| [protein release factor]-glutamine N5-methyltransferase [Magnetococcus sp. MC-1] Length = 289 Score = 287 bits (736), Expect = 8e-76, Method: Composition-based stats. Identities = 94/264 (35%), Positives = 135/264 (51%), Gaps = 4/264 (1%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 D L L + +DPD L + I R E + I+G + F + Sbjct: 28 PRLDGELLLAHTLTLRRLDLFLDPDRPLSPDELQRYKAFIKRRAAREPVAYIVGKKPFLH 87 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 LT+++ PRPETE LV +A F ++R ILD+GTG+GA+ LALL Sbjct: 88 WELTVTAGVLIPRPETEHLVQAAQDFFNQ--QQRAPHTILDIGTGSGAILLALLDHFNEA 145 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIV 180 +G+G+DIS AL A+ N ++ R L S + + E FD+I+SNPPYI S ++ Sbjct: 146 QGIGIDISKAALACAQHNGEQLNLNNRAQWLYSHFCDDLPHESRFDLILSNPPYINSDVI 205 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 L EV ++PR++LDGG+DG+ Y+ I LN GL VEIG++Q V + + Sbjct: 206 PTLEAEVNQWEPRLALDGGVDGMQAYQQIIPAAVARLNPGGLLGVEIGHDQGPRVAALMQ 265 Query: 241 SRKLFLVNAFKDYGGNDRVLLFCR 264 L V KDY +DRV+L R Sbjct: 266 QHGLQQVVVHKDYAQHDRVVLGHR 289 >gi|188534014|ref|YP_001907811.1| Protein methyltransferase [Erwinia tasmaniensis Et1/99] gi|188029056|emb|CAO96924.1| Protein methyltransferase [Erwinia tasmaniensis Et1/99] Length = 281 Score = 287 bits (736), Expect = 9e-76, Method: Composition-based stats. Identities = 91/263 (34%), Positives = 137/263 (52%), Gaps = 8/263 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 RD+ L VTG S +I D LD L +VR E I + G R+F++ Sbjct: 20 PKRDAEILLGLVTGKSRAWLIGFDDHELDAATLKRLDALLVRRAAGEPIAYLTGEREFWS 79 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L ++ DT PRP++E+LV+ ALA +LDLGTG+GA+ LAL E Sbjct: 80 LSLCVTPDTLIPRPDSEVLVEQALAHL-----PGGPCSVLDLGTGSGAIALALASERADC 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVD 181 + +GVD A+ +A+ NA G++ +Q DWFS++ + F +IVSNPPYI++ Sbjct: 135 RVLGVDRIPAAVALAQHNAARLGLA-NATFMQGDWFSALNQQRFAMIVSNPPYIDAADEH 193 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P +L G GL+ + IA R+L G +E G+ Q D+ +I Sbjct: 194 LAQGDVR-FEPASALVAGDSGLADIKIIAAQAGRYLVNQGWLLLEHGWQQGEDIRQILAD 252 Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264 + ++ +DYGGNDRV + Sbjct: 253 KGFCQISTRQDYGGNDRVTFGQK 275 >gi|254244444|ref|ZP_04937766.1| hypothetical protein PA2G_05302 [Pseudomonas aeruginosa 2192] gi|126197822|gb|EAZ61885.1| hypothetical protein PA2G_05302 [Pseudomonas aeruginosa 2192] Length = 276 Score = 287 bits (736), Expect = 9e-76, Method: Composition-based stats. Identities = 86/262 (32%), Positives = 131/262 (50%), Gaps = 8/262 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A D+ L G + P+ ++ + I R E + ILG + F++ Sbjct: 19 ARLDTELLLAAAMGKPRSFLRTWPERIVPREANERFDDWIARRRNGEPVAYILGHQGFWS 78 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L ++ T PRP+TELLV++ALA D +LDLGTGTGA+ LAL E P + Sbjct: 79 LDLEVAPHTLIPRPDTELLVETALATLTA-----DTATVLDLGTGTGAIALALASERPLW 133 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181 VD +A+ +A+ N + E + +S WFS+++G F +IV NPPYI + Sbjct: 134 TVTAVDRVEEAVALAERNRQRL-LLENVEVRRSHWFSALDGRRFRMIVGNPPYIPASDPH 192 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P+ +L G DGL R I +HL +G +E GY+Q V + + Sbjct: 193 LSEGDVR-FEPKSALVAGSDGLDDIRQIVAQAPQHLLDEGWLLLEHGYDQGAAVRELLGA 251 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 R V+ +D GGN+R+ L Sbjct: 252 RGFAGVHTLRDLGGNERITLGQ 273 >gi|145639101|ref|ZP_01794709.1| HemK [Haemophilus influenzae PittII] gi|145272073|gb|EDK11982.1| HemK [Haemophilus influenzae PittII] gi|309751052|gb|ADO81036.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Haemophilus influenzae R2866] Length = 292 Score = 287 bits (736), Expect = 1e-75, Method: Composition-based stats. Identities = 98/270 (36%), Positives = 144/270 (53%), Gaps = 12/270 (4%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 + D+ L TG Q++ D+ +D++ R LT + R LK E I ILG ++F+ Sbjct: 22 NSKIDALVLLQYATGKPRTQILAFDDTEIDEKVRLKLTALLDRRLKGEPIAYILGEKEFW 81 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV-RILDLGTGTGAVCLALL---- 116 ++ L +S T PRP+TE+LV+ AL SL ++E+ RILDLGTGTGA+ LAL Sbjct: 82 SLPLNVSKGTLIPRPDTEVLVEKALQISLEKLEQNPPHFRILDLGTGTGAIALALASELF 141 Query: 117 ----KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNP 172 K + +GVD+ + +A+SNA N + LQS WF ++ G FD+IVSNP Sbjct: 142 SICQKRQISLEIIGVDLMPDVVALAQSNAERNQL--NVQFLQSRWFDNITGKFDLIVSNP 199 Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232 PYI+ +VR F+P +L G + R I + +LN +G +E G+ Q Sbjct: 200 PYIDVQDEHLHQGDVR-FEPLSALVANDAGYADLRYIIESAPNYLNFNGTLLLEHGWQQG 258 Query: 233 VDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262 V IF+ +V +DYG N+RV L Sbjct: 259 EKVRSIFQENHWEMVETVRDYGDNERVTLG 288 >gi|156933677|ref|YP_001437593.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Cronobacter sakazakii ATCC BAA-894] gi|156531931|gb|ABU76757.1| hypothetical protein ESA_01499 [Cronobacter sakazakii ATCC BAA-894] Length = 285 Score = 287 bits (736), Expect = 1e-75, Method: Composition-based stats. Identities = 88/261 (33%), Positives = 132/261 (50%), Gaps = 8/261 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 RD+ L VTG + ++ ++ L D + L + R E + ++G R+F++ Sbjct: 20 PRRDAEILLAFVTGRTRTFILAFGETALTDDEHERLDALLARRAAGEPVAYLIGQREFWS 79 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +S T PRP+TE LV+ ALA ILDLGTGTGA+ LAL E P Sbjct: 80 LPLEVSPATLIPRPDTECLVEQALARL-----PATPCCILDLGTGTGAIALALASERPDC 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVD 181 +D+ +A+ +AK NA G+ + LQS WFS++ + F +IVSNPPYI+ Sbjct: 135 HVTALDVIPEAVALAKRNAQRLGI-DNVTILQSHWFSALTDVRFSLIVSNPPYIDGDDPH 193 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P+ +L GL+ T+ R L +G +E G+ Q V +F Sbjct: 194 LSQGDVR-FEPKSALVADDAGLADLETLVTEARRFLEDNGWLMLEHGWQQGEAVRELFTR 252 Query: 242 RKLFLVNAFKDYGGNDRVLLF 262 V +DYGGN+R+ L Sbjct: 253 AGYQAVETCRDYGGNERLTLG 273 >gi|291560727|emb|CBL39527.1| protein-(glutamine-N5) methyltransferase, release factor-specific [butyrate-producing bacterium SSC/2] Length = 283 Score = 287 bits (735), Expect = 1e-75, Method: Composition-based stats. Identities = 78/262 (29%), Positives = 127/262 (48%), Gaps = 6/262 (2%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQ-RFFLTNAIVRSLKHESIHRILGWRDF 60 A D+ +S + ++D++ I + +H + ILG ++F Sbjct: 21 NASGDAWYLFSECFHISREDYLFGMTDEINDKEAEERYKELIQKRKEHVPLQYILGTQEF 80 Query: 61 YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120 ++ D PR +TE +++ L + ILD+ TG+G + ++L Sbjct: 81 MGYTFKVTPDVLIPRADTETVLEEVLDQLKQ---SKKPDTILDICTGSGCIAISLALILK 137 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180 VG DIS KAL+IAK+N ++ +QSD F +V G +D+I+SNPPYI + Sbjct: 138 PEVCVGTDISEKALKIAKANGE--NLAPMVKFIQSDLFENVTGSYDLIISNPPYITTEEC 195 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 L EV+D++P ++LDG DGL Y+ I +LN G+ + EIGY+Q V + E Sbjct: 196 GKLMPEVKDYEPMLALDGKEDGLYFYKKIIKEAKNYLNPQGMLAFEIGYDQGEAVKNLME 255 Query: 241 SRKLFLVNAFKDYGGNDRVLLF 262 ++ V KD G DR++ Sbjct: 256 AQDFACVEIKKDLAGLDRLVFG 277 >gi|16760668|ref|NP_456285.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29141573|ref|NP_804915.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|213051785|ref|ZP_03344663.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213419807|ref|ZP_03352873.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] gi|213426496|ref|ZP_03359246.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213581390|ref|ZP_03363216.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] gi|213859592|ref|ZP_03385296.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|289827377|ref|ZP_06545997.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|25513362|pir||AI0719 HemK protein, probable protoporphyrinogen oxidase hemK [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16502964|emb|CAD02130.1| HemK protein, putative protoporphyrinogen oxidase [Salmonella enterica subsp. enterica serovar Typhi] gi|29137200|gb|AAO68764.1| HemK protein [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] Length = 277 Score = 287 bits (735), Expect = 1e-75, Method: Composition-based stats. Identities = 92/258 (35%), Positives = 129/258 (50%), Gaps = 8/258 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 RD+ L VTG ++ ++ L D Q+ L + R + E I + G R+F++ Sbjct: 20 PRRDAEILLEYVTGKRRTYIMAFGETPLTDVQQQQLAELLQRRKQGEPIAYLTGLREFWS 79 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +S T PRP+TE LV+ ALA RILDLGTGTGA+ LAL E P Sbjct: 80 LPLFVSPATLIPRPDTECLVEQALARL-----PVKTCRILDLGTGTGAIALALACERPDC 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181 + VD A+ +A NA + LQS WFS++ G FD+IVSNPPYI++ Sbjct: 135 EVTAVDRMPDAVALAIRNAEHLAIR-NVRILQSCWFSALSGQQFDMIVSNPPYIDAQDPH 193 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+PR +L +G++ I D + L G +E G+ Q V F Sbjct: 194 LSEGDVR-FEPRSALVADENGMADLTHIIDNARQMLTPGGFLLLEHGWRQGEAVRAAFRR 252 Query: 242 RKLFLVNAFKDYGGNDRV 259 V +DYGGN+RV Sbjct: 253 SGYTDVETCRDYGGNERV 270 >gi|301170296|emb|CBW29902.1| N5-glutamine methyltransferase, modifies release factors RF-1 and RF-2 [Haemophilus influenzae 10810] Length = 292 Score = 287 bits (735), Expect = 1e-75, Method: Composition-based stats. Identities = 98/270 (36%), Positives = 147/270 (54%), Gaps = 12/270 (4%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 + D+ L TG Q++ D+ +D++ R LT + R LK E I ILG ++F+ Sbjct: 22 NSKIDALVLLQHATGKLRTQILAFDDTEIDEKVRLKLTALLDRRLKGEPIAYILGEKEFW 81 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALLKESP 120 ++ L +S T PRP+TE+LV+ AL +L ++E+ RILDLGTGTGA+ LAL E Sbjct: 82 SLPLNVSKSTLIPRPDTEILVEKALQIALEKLEENPPHFRILDLGTGTGAIALALASELA 141 Query: 121 FF--------KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNP 172 + +GVD+ + +A+SNA N + LQS WF ++ G FD+IVSNP Sbjct: 142 PICQKRHIPLEIIGVDLMSDVVALAQSNAERNQL--NVQFLQSCWFDNITGKFDLIVSNP 199 Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232 PYI + +VR F+P +L +G + R I + S +LN +G+ +E G+ Q Sbjct: 200 PYINAQDEHLHQGDVR-FEPLSALVANDEGYADLRHIIELASSYLNSNGVLLLEHGWQQG 258 Query: 233 VDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262 V IF+ +V +DYG N+RV L Sbjct: 259 EKVRSIFQENHWEMVETVRDYGDNERVTLG 288 >gi|149174662|ref|ZP_01853287.1| hemK protein [Planctomyces maris DSM 8797] gi|148846356|gb|EDL60694.1| hemK protein [Planctomyces maris DSM 8797] Length = 309 Score = 287 bits (735), Expect = 1e-75, Method: Composition-based stats. Identities = 78/265 (29%), Positives = 127/265 (47%), Gaps = 7/265 (2%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 D+ L ++ + + V+ +++R + + R E + ++G R+F+ Sbjct: 44 PRLDTEVLLAHARNCERIRLYTNYEDVVTEQERALMRQLVQRRANSEPVAYLVGNREFFG 103 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + + + PRP+TE LV + +K ILDL TG+G + ++ Sbjct: 104 LDFYVDKNVLVPRPDTETLV----IELVDEAQKLTNPFILDLCTGSGCIAISAAANCHNA 159 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIV 180 K DIS AL IA+ NA +N +S + L SD F + LFD+IVSNPPYI + Sbjct: 160 KFQATDISEPALAIAQKNAASNELSNQIQFLLSDCFEQIPPGTLFDIIVSNPPYIPDAEI 219 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 + L +VR +PR++L GG DGL YR I R+L GL +E Q+ D++ +F+ Sbjct: 220 EQLEKDVRQHEPRLALSGGKDGLDFYRKIIQEAGRYLKDQGLLMLEFSPEQEADLLALFK 279 Query: 241 SRK-LFLVNAFKDYGGNDRVLLFCR 264 + V D G RV++ + Sbjct: 280 ATGEYTNVRVKADLAGRARVIIGQK 304 >gi|119945324|ref|YP_943004.1| modification methylase, HemK family protein [Psychromonas ingrahamii 37] gi|119863928|gb|ABM03405.1| modification methylase, HemK family protein [Psychromonas ingrahamii 37] Length = 279 Score = 287 bits (735), Expect = 1e-75, Method: Composition-based stats. Identities = 92/260 (35%), Positives = 135/260 (51%), Gaps = 8/260 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 AL D+ L V + ++ P+ L Q+ I + +K + + G R+F++ Sbjct: 20 ALLDAQVLLAFVLEKETVYLMTWPERELSQAQKSAFEGLISQRVKGVPVAHLTGAREFWS 79 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +++ T PRP+TELLV++AL + RILDLGTG+GA+ LAL E P Sbjct: 80 LPLKVNNSTLIPRPDTELLVEAALDY------CSADARILDLGTGSGAIILALASELPDA 133 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182 +GVD++ A+++A N + QS+WF ++ GLFDV+VSNPPYIE Sbjct: 134 YCLGVDVNESAVQLAIENGKNLKL-NNVHFQQSNWFDNINGLFDVVVSNPPYIEKNDHHL 192 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 +VR F+P +L +GL+ R IA +L K G VE G+NQ V +F Sbjct: 193 KLGDVR-FEPLSALVADENGLADIRKIAQKTPEYLKKGGYLLVEHGFNQGSTVRELFTDL 251 Query: 243 KLFLVNAFKDYGGNDRVLLF 262 V KDYG NDRV + Sbjct: 252 GYSEVITIKDYGDNDRVTMG 271 >gi|153868970|ref|ZP_01998684.1| hemK protein [Beggiatoa sp. PS] gi|152074464|gb|EDN71316.1| hemK protein [Beggiatoa sp. PS] Length = 280 Score = 287 bits (735), Expect = 1e-75, Method: Composition-based stats. Identities = 77/262 (29%), Positives = 136/262 (51%), Gaps = 7/262 (2%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 D+ LC + ++ ++ P+ +L + Q + R ++ I ++G + F++ Sbjct: 22 PRLDAEILLCHILNVTRSYLLAWPEKILTENQYAQFQALLTRRVQGVPIAYLIGSKAFWS 81 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 L ++ +T PRPETELLV+ LA R+ +++DLGTG+GA+ LA+ KE P+ Sbjct: 82 FDLQVTKNTLIPRPETELLVEQVLA----RLPPDSDAQVIDLGTGSGAIALAIAKERPYC 137 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVD 181 + + D + +AL++A++NA G L SDW+S++ + ++VSNPPY+ Sbjct: 138 RLLATDNATEALQVAQANAQHLGF-HPIKFLLSDWWSALGDIKATIVVSNPPYVAENDCH 196 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +V +PR +L G+DGL+ R + HL +G +E GY+Q V ++FE Sbjct: 197 LTQGDV-HHEPRNALVAGVDGLTDIRALVKESLSHLEINGWLLLEHGYDQGEAVQQLFEQ 255 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 + + + D G RV + Sbjct: 256 QGYQAIETYYDLAGLPRVTVGQ 277 >gi|254515299|ref|ZP_05127360.1| protein-(glutamine-N5) methyltransferase, release factor-specific [gamma proteobacterium NOR5-3] gi|219677542|gb|EED33907.1| protein-(glutamine-N5) methyltransferase, release factor-specific [gamma proteobacterium NOR5-3] Length = 278 Score = 286 bits (734), Expect = 1e-75, Method: Composition-based stats. Identities = 89/258 (34%), Positives = 133/258 (51%), Gaps = 7/258 (2%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 +A R++ LC + P++ + + + + + + +LG RDF+ Sbjct: 18 EARREAEVLLCAALNKPRSYFMAWPEADVAEAIARRYRQWLQQRAEGVPVAYLLGTRDFW 77 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 + LT++ T PRP+TELLV+ ALA LP + +LDLGTG+GA+ LAL E P Sbjct: 78 TLSLTVNEATLIPRPDTELLVEQALALELP-----ESATVLDLGTGSGAIALALATERPQ 132 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181 ++ +GV+ S +AL +A NA G+ + L SDWFS V G FD+IVSNPPYI Sbjct: 133 WRVLGVERSPEALAVAIDNARQLGL-DSVQWLSSDWFSQVVGRFDLIVSNPPYIADQDAH 191 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 ++R F+PR +L G DGL R I HL G +E G+ Q V + + Sbjct: 192 LATGDLR-FEPRSALASGSDGLDDIRKIIARSPDHLEPGGHLLLEHGFEQAPAVRALLTA 250 Query: 242 RKLFLVNAFKDYGGNDRV 259 V ++ D G++RV Sbjct: 251 TGFANVASYDDLAGHERV 268 >gi|315179417|gb|ADT86331.1| hemK protein [Vibrio furnissii NCTC 11218] Length = 278 Score = 286 bits (734), Expect = 1e-75, Method: Composition-based stats. Identities = 88/261 (33%), Positives = 130/261 (49%), Gaps = 9/261 (3%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 D+ LC ++ PD +LDD + R L E + I+G R+F+++ Sbjct: 13 LDAAVLLCHALDKPRSYLLTWPDKLLDDTTHAAFDALLARRLTGEPVAYIIGEREFWSLP 72 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L +S T PRP+TE LV+ AL + + ILDLGTGTGA+ LAL E P + Sbjct: 73 LKVSPSTLIPRPDTERLVEVALEKA-----QTLTGDILDLGTGTGAIALALASELPQRRV 127 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDC 182 VG+D+ +A ++A NA ++ LQ WF + F +IVSNPPYIE Sbjct: 128 VGIDLRDEAQQLASDNANRLHLT-NVTFLQGSWFEPLSHGTKFALIVSNPPYIEENDPHL 186 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 +VR F+P+ +L +GL+ + I+D +L G + E GY+Q V I ++ Sbjct: 187 AQGDVR-FEPKSALVAADNGLADIKHISDAGRDYLQSGGWLAFEHGYDQGASVRTIMQAL 245 Query: 243 KLFLVNAFKDYGGNDRVLLFC 263 V +DY G+DRV L Sbjct: 246 GYQHVITEQDYAGHDRVTLGQ 266 >gi|304317930|ref|YP_003853075.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302779432|gb|ADL69991.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 277 Score = 286 bits (734), Expect = 2e-75, Method: Composition-based stats. Identities = 88/265 (33%), Positives = 134/265 (50%), Gaps = 10/265 (3%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 + +S + L G S ++++ D L D + I+G + F Sbjct: 20 EPRIESEALLSFTLGASKEYLLINRDKELTDDSFNKYMEVLDLRKSGMPYQYIVGEKHFM 79 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 + +S PR +TE+LV+ L + +LD+GTG+GA+ +++ K Sbjct: 80 GLIFNVSPSVLIPRNDTEILVEEVLKRL------KSGDTVLDIGTGSGAIAVSIAK-YKD 132 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVI 179 K VDIS ALE+AK NA NGVS++ ++SD FSS+ FD+IVSNPPYI S Sbjct: 133 VKVYAVDISDGALEVAKENADINGVSDKVIFIKSDLFSSIPDGIRFDLIVSNPPYIRSNE 192 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 ++ L EV+ +P+I+LDGG DGL+ YR I ++ G+ + E+G++Q DV I Sbjct: 193 INELQEEVKR-EPKIALDGGEDGLTFYRRIVKDSVNYIKFGGIIAFEVGFDQAWDVKDIL 251 Query: 240 ESRKLFLVNAFKDYGGNDRVLLFCR 264 + KD G DRV+L R Sbjct: 252 VDGGYSDIEVVKDLQGIDRVVLGKR 276 >gi|170683182|ref|YP_001743982.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli SMS-3-5] gi|218699919|ref|YP_002407548.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli IAI39] gi|170520900|gb|ACB19078.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli SMS-3-5] gi|218369905|emb|CAR17680.1| N5-glutamine methyltransferase, modifies release factors RF-1 and RF-2 [Escherichia coli IAI39] Length = 277 Score = 286 bits (734), Expect = 2e-75, Method: Composition-based stats. Identities = 91/262 (34%), Positives = 126/262 (48%), Gaps = 8/262 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 RD+ L VTG ++ ++ L D Q L + R E I + G R+F++ Sbjct: 20 PRRDAEILLAHVTGKGRTFILAFGETQLTDEQCQQLDALLTRRRDGEPIAHLTGVREFWS 79 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +S T PRP+TE LV+ ALA RILDLGTGTGA+ LAL E P Sbjct: 80 LPLFVSPATLIPRPDTECLVEQALARL-----PEQPCRILDLGTGTGAIALALASERPDC 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181 + VD A+ +A+ NA N + LQSDWFS++ G F +IVSNPPYI+ Sbjct: 135 EITAVDCMPDAVSLAQRNAQ-NLAIKNIHILQSDWFSALAGQQFAMIVSNPPYIDEQDPH 193 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P +L G++ I + L G +E G+ Q V + F Sbjct: 194 LQQGDVR-FEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFIH 252 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 V +DYG N+RV L Sbjct: 253 AGYHDVETCRDYGDNERVTLGR 274 >gi|317491753|ref|ZP_07950188.1| methyltransferase [Enterobacteriaceae bacterium 9_2_54FAA] gi|316920187|gb|EFV41511.1| methyltransferase [Enterobacteriaceae bacterium 9_2_54FAA] Length = 280 Score = 286 bits (734), Expect = 2e-75, Method: Composition-based stats. Identities = 87/262 (33%), Positives = 128/262 (48%), Gaps = 8/262 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 RD+ L V G S ++ ++ L Q L + R + E + +LG R+F++ Sbjct: 20 PKRDAEILLGFVAGKSRSSILAFGETELTPEQVQQLELLLARRERGEPVAYLLGEREFWS 79 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +S T PRP+TE LV+ ALA + +LDLGTGTGA+ LAL E P Sbjct: 80 LPLEVSPATLIPRPDTECLVEKALA-----LLPVAACSVLDLGTGTGAIALALASERPDC 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVD 181 + VGVD S A +A NA ++ + W+ V F +I SNPPYI+ Sbjct: 135 QFVGVDYSADATALASRNASRLNIT-NVTFVTGSWYDPVGAQQFALIASNPPYIDESDPH 193 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P +L +GL+ R I + HL + G +E G+ Q V ++ ++ Sbjct: 194 LSQGDVR-FEPASALVAPENGLADLRHIVEYAPDHLIEGGWLIMEHGWQQGEAVRQLLKA 252 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 R V KDYG NDR+ L Sbjct: 253 RGFTDVVTEKDYGNNDRITLGQ 274 >gi|322434295|ref|YP_004216507.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Acidobacterium sp. MP5ACTX9] gi|321162022|gb|ADW67727.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Acidobacterium sp. MP5ACTX9] Length = 282 Score = 286 bits (733), Expect = 2e-75, Method: Composition-based stats. Identities = 92/264 (34%), Positives = 130/264 (49%), Gaps = 8/264 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 AL D+ L G+ S + P+ +D Q+ AI R L E I ILG ++FY Sbjct: 24 ALADAAILLTHTLGIDSTTLRAHPERPIDRDQQAVYQRAIERRLTFEPIQYILGTQEFYG 83 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + ++ PRPETE LV++ A R+ VRILD+GTG+GA+ +AL P Sbjct: 84 LPFRVTPAVLIPRPETEHLVEAVAA----RVPHNRPVRILDVGTGSGAIAIALAHLLPHA 139 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIV 180 +DIS +A+EIA+ NA TN ++ R D QSD F++V F IVSNPPYI Sbjct: 140 HITALDISPEAIEIAQENARTNHLAARIDFQQSDLFTAVTKGPPFAAIVSNPPYIPLSDS 199 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 + L +VRD++P +L G G Y + L +GL ++EIG Q+ + + Sbjct: 200 ESLHPQVRDYEPHQALFSGPTGFEVYERLIIQAPSLLLPNGLIALEIGQGQQPRMAELLR 259 Query: 241 SRKLFLVNAFKDYGGNDRVLLFCR 264 V D RV L R Sbjct: 260 F--WRSVEFLPDLQQIPRVALARR 281 >gi|209694373|ref|YP_002262301.1| protein methyltransferase HemK [Aliivibrio salmonicida LFI1238] gi|208008324|emb|CAQ78476.1| protein methyltransferase HemK [Aliivibrio salmonicida LFI1238] Length = 288 Score = 286 bits (733), Expect = 2e-75, Method: Composition-based stats. Identities = 86/260 (33%), Positives = 130/260 (50%), Gaps = 9/260 (3%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ LC V ++ P+ ++ + + + + R L E I I+G+R+F+++ L Sbjct: 27 DAAVLLCHVLDKPRSYLLTWPEKLVAETEYNAFESLLSRRLSGEPIAYIIGYREFWSLPL 86 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 +S T PRP+TE LV+ AL P EK +LDLGTGTGA+ LA+ E P + Sbjct: 87 KVSPTTLIPRPDTERLVEVALEHLSPSSEK-----VLDLGTGTGAIALAIASEMPDMCVI 141 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVDCL 183 GVD A+ +AK NA N + + Q WF + + F +IVSNPPYI+ Sbjct: 142 GVDYQYDAVALAKDNAKDNNILNT-EFRQGSWFDPIRMDEQFSIIVSNPPYIDGNDPHLS 200 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 +VR F+P+ +L +G + I + HL ++G +E G+ Q + FE Sbjct: 201 QGDVR-FEPQTALVAEKEGFADLIHIMEHSRTHLVENGWLLMEHGFEQGKQLRDYFEEYG 259 Query: 244 LFLVNAFKDYGGNDRVLLFC 263 V +DY GNDRV L Sbjct: 260 FINVKTEQDYAGNDRVTLGQ 279 >gi|218704734|ref|YP_002412253.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli UMN026] gi|293404755|ref|ZP_06648747.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli FVEC1412] gi|298380398|ref|ZP_06989997.1| HemK protein [Escherichia coli FVEC1302] gi|300896600|ref|ZP_07115119.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS 198-1] gi|218431831|emb|CAR12716.1| N5-glutamine methyltransferase, modifies release factors RF-1 and RF-2 [Escherichia coli UMN026] gi|291426963|gb|EFE99989.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli FVEC1412] gi|298277840|gb|EFI19354.1| HemK protein [Escherichia coli FVEC1302] gi|300359543|gb|EFJ75413.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS 198-1] Length = 277 Score = 286 bits (733), Expect = 2e-75, Method: Composition-based stats. Identities = 91/262 (34%), Positives = 126/262 (48%), Gaps = 8/262 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 RD+ L VTG ++ ++ L D Q L + R E I + G R+F++ Sbjct: 20 PRRDAEILLEHVTGKGRTFILAFGETQLTDEQCQQLDALLTRRRDGEPIAHLTGVREFWS 79 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +S T PRP+TE LV+ ALA RILDLGTGTGA+ LAL E P Sbjct: 80 LPLFVSPATLIPRPDTECLVEQALARL-----PEQPCRILDLGTGTGAIALALASERPDC 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181 + VD A+ +A+ NA N + LQSDWFS++ G F +IVSNPPYI+ Sbjct: 135 EITAVDRMPDAVSLAQRNAQ-NLAIKNIHILQSDWFSALAGQQFAMIVSNPPYIDEQDPH 193 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P +L G++ I + L G +E G+ Q V + F Sbjct: 194 LQQGDVR-FEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFIH 252 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 V +DYG N+RV L Sbjct: 253 AGYHDVETCRDYGDNERVTLGR 274 >gi|37525988|ref|NP_929332.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Photorhabdus luminescens subsp. laumondii TTO1] gi|36785418|emb|CAE14364.1| Protein methyltranferase HemK (Protein-glutamine N-methyltransferase) [Photorhabdus luminescens subsp. laumondii TTO1] Length = 282 Score = 286 bits (733), Expect = 2e-75, Method: Composition-based stats. Identities = 90/259 (34%), Positives = 128/259 (49%), Gaps = 8/259 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 RD+ L VT S ++ ++ L Q L + R +K E I I G R+F++ Sbjct: 20 PKRDAEILLGFVTHHSRTYLLAFGETQLAPEQFSQLEALLARRVKGEPIAYITGEREFWS 79 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +S T PRP+TE LV+ AL RILDLGTGTGA+ LA+ E P Sbjct: 80 LPLNVSPATLIPRPDTECLVEKALERL-----SLTPCRILDLGTGTGAIALAIASERPDC 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVD 181 + GVDI+ A+ +A+ NA + D L S+WF S+ F +IVSNPPYI+ Sbjct: 135 RVTGVDINPDAVMLAQGNAEKLKIQ-NVDFLLSNWFFSLNNQQFGMIVSNPPYIDETDPH 193 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P +L G++ TI D L G +E G+ Q + +F Sbjct: 194 LSQGDVR-FEPDSALIAAKQGIADLNTIIDLSRHFLLPGGWLLLEHGWKQGNVIRSLFSE 252 Query: 242 RKLFLVNAFKDYGGNDRVL 260 V F+DYGGN+R+ Sbjct: 253 SGYRQVATFQDYGGNERIT 271 >gi|293395775|ref|ZP_06640057.1| protein methyltransferase HemK [Serratia odorifera DSM 4582] gi|291421712|gb|EFE94959.1| protein methyltransferase HemK [Serratia odorifera DSM 4582] Length = 276 Score = 286 bits (733), Expect = 2e-75, Method: Composition-based stats. Identities = 88/262 (33%), Positives = 133/262 (50%), Gaps = 8/262 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A RD+ L VTG + ++ +++L ++ L ++R + E + ++G R+F++ Sbjct: 20 AKRDAEILLGFVTGRARTFLLAFGETLLTTQESAQLEQLLMRRERGEPVAYLIGEREFWS 79 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L++S T PRP+TE LV+ ALA ILDLGTGTGA+ LAL E Sbjct: 80 LPLSVSPATLIPRPDTECLVEQALARLPAH-----RCEILDLGTGTGAIALALASERADC 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181 GVD+ +A+ +A+ NA + Q DWF+ V G FD+I SNPPYI+ V Sbjct: 135 MVTGVDLQPQAVALAQHNAQKLAIG-NVQFHQGDWFTPVAGRRFDLIASNPPYIDGDDVH 193 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P +L GL+ R I R+L G +E G+ Q V + + Sbjct: 194 LSQGDVR-FEPGSALVAQEHGLADLRAIVQQAPRYLQPQGWLLLEHGWQQAESVRAMLAA 252 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 + + +DYGGN RV L Sbjct: 253 AGFSAIESCRDYGGNLRVTLGQ 274 >gi|323977217|gb|EGB72304.1| protein-(glutamine-N5) methyltransferase [Escherichia coli TW10509] Length = 277 Score = 286 bits (733), Expect = 2e-75, Method: Composition-based stats. Identities = 90/262 (34%), Positives = 125/262 (47%), Gaps = 8/262 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 RD+ L VTG ++ ++ L D Q L + R E I + G R+F++ Sbjct: 20 PRRDAEILLEHVTGKGRTFILAFGETQLTDEQCQQLDALLTRRRDGEPIAHLTGVREFWS 79 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +S T PRP+TE LV+ ALA RILDLGTGTGA+ LAL E P Sbjct: 80 LPLFVSPATLIPRPDTECLVEQALARL-----PEQPCRILDLGTGTGAIALALASERPDC 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181 + VD A+ +A+ NA + LQSDWFS++ G F +IVSNPPYI+ Sbjct: 135 EITAVDRMPDAVSLAQRNAQHLAIK-NIHILQSDWFSALAGQQFAMIVSNPPYIDEQDPH 193 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P +L G++ I + L G +E G+ Q V + F Sbjct: 194 LQQGDVR-FEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFIH 252 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 V +DYG N+RV L Sbjct: 253 AGYHDVETCRDYGDNERVTLGR 274 >gi|167766741|ref|ZP_02438794.1| hypothetical protein CLOSS21_01247 [Clostridium sp. SS2/1] gi|167711495|gb|EDS22074.1| hypothetical protein CLOSS21_01247 [Clostridium sp. SS2/1] Length = 283 Score = 286 bits (733), Expect = 2e-75, Method: Composition-based stats. Identities = 79/262 (30%), Positives = 130/262 (49%), Gaps = 6/262 (2%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQ-RFFLTNAIVRSLKHESIHRILGWRDF 60 A D+ +S + ++D++ I + +H + ILG ++F Sbjct: 21 NASGDAWYLFSECFHISREDYLFGMTDEINDKEAEERYKELIQKRKEHVPLQYILGTQEF 80 Query: 61 YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120 ++ D PR +TE +++ L ++ ++ILDL TG+G + ++L Sbjct: 81 MGYTFKVTPDVLIPRADTETVLEEVLLKVPQTLKN---LKILDLCTGSGCIAISLALILK 137 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180 VG DIS KAL+IAK+N ++ +QSD F +V G +D+I+SNPPYI + Sbjct: 138 PEVCVGTDISEKALKIAKANGE--NLAPMVKFIQSDLFENVTGSYDLIISNPPYITTEEC 195 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 L EV+D++P ++LDG DGL Y+ I +LN G+ + EIGY+Q V + E Sbjct: 196 GKLMPEVKDYEPMLALDGKEDGLYFYKKIIKEAKNYLNPQGMLAFEIGYDQGEAVKNLME 255 Query: 241 SRKLFLVNAFKDYGGNDRVLLF 262 ++ V KD G DR++ Sbjct: 256 AQDFACVEIKKDLAGLDRLVFG 277 >gi|284921024|emb|CBG34089.1| protein methyltransferase hemk (protein-glutamine N methyltransferase) [Escherichia coli 042] Length = 277 Score = 286 bits (733), Expect = 2e-75, Method: Composition-based stats. Identities = 91/262 (34%), Positives = 126/262 (48%), Gaps = 8/262 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 RD+ L VTG ++ ++ L D Q L + R E I + G R+F++ Sbjct: 20 PRRDAEILLEHVTGKGRTFILAFGETQLTDEQCQQLDALLTRRRDGEPIAHLTGGREFWS 79 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +S T PRP+TE LV+ ALA RILDLGTGTGA+ LAL E P Sbjct: 80 LPLFVSPATLIPRPDTECLVEQALARL-----PEQPCRILDLGTGTGAIALALASERPDC 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181 + VD A+ +A+ NA N + LQSDWFS++ G F +IVSNPPYI+ Sbjct: 135 EITAVDRMPDAVSLAQRNAQ-NLAIKNIHILQSDWFSALAGQQFAMIVSNPPYIDEQDPH 193 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P +L G++ I + L G +E G+ Q V + F Sbjct: 194 LQQGDVR-FEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFIH 252 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 V +DYG N+RV L Sbjct: 253 AGYHDVETCRDYGDNERVTLGR 274 >gi|157804238|ref|YP_001492787.1| tRNA (guanine-N(7)-)-methyltransferase [Rickettsia canadensis str. McKiel] gi|157785501|gb|ABV74002.1| tRNA (guanine-N(7)-)-methyltransferase [Rickettsia canadensis str. McKiel] Length = 323 Score = 286 bits (732), Expect = 2e-75, Method: Composition-based stats. Identities = 85/283 (30%), Positives = 146/283 (51%), Gaps = 23/283 (8%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 + ++ L V +++ D L+ + + R LKHE I I+G ++FY+ Sbjct: 24 SQLEARILLQHVINTPLQYLLIKLDEQLNQSEIEAFEKLLERRLKHEPIAYIIGVKEFYS 83 Query: 63 VRLTLSSDTFEPRPETELLVDSALA----------------------FSLPRIEKRDVVR 100 ++ PR +TELLVD +A + + ++ Sbjct: 84 REFIVNKHVLIPRGDTELLVDIVVALVKRCHYRESRNPVNHYMDTCLRGYDTRLQTNNIK 143 Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 IL+LGTG+G + ++LL E P + DIS A+E+A++NA+ + V++ + S+WF + Sbjct: 144 ILELGTGSGCIAISLLCELPNANVIATDISLDAIEVARNNALKHHVTDHIQIIHSNWFEN 203 Query: 161 VE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 +E FD IVSNPPYI + + +E +++P ++L +GL Y+TIA+ + L + Sbjct: 204 IENQKFDFIVSNPPYISNTEKSEMAIETINYEPHLALFAEENGLQSYKTIAENAKKFLKQ 263 Query: 220 DGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262 +G ++EIG+ QK V++IF + L N +KD G RV+LF Sbjct: 264 NGKLALEIGFKQKETVIQIFLDQGYNLENVYKDLQGYSRVILF 306 >gi|315127041|ref|YP_004069044.1| N5-glutamine methyltransferase, modifies release factors RF-1 and RF-2 [Pseudoalteromonas sp. SM9913] gi|315015555|gb|ADT68893.1| N5-glutamine methyltransferase, modifies release factors RF-1 and RF-2 [Pseudoalteromonas sp. SM9913] Length = 279 Score = 286 bits (732), Expect = 3e-75, Method: Composition-based stats. Identities = 86/262 (32%), Positives = 129/262 (49%), Gaps = 8/262 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A D+ L + + P+ L D Q A R L E + I G+R+F++ Sbjct: 23 AKLDAQVLLLNILQKPRSYLFTWPEKQLTDEQSQAFERACERRLNGEPVSHITGYREFWS 82 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 ++L ++ T PRP+TE LV+ AL+ ++P + ++LDLGTGTGA+ LAL E P + Sbjct: 83 LQLEVNPTTLIPRPDTETLVELALSCNVP-----NDAKVLDLGTGTGAIALALGSEMPTW 137 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVD 181 + VD A+ +AK N + QS+WFS++ FD+IV+NPPYIE Sbjct: 138 DIIAVDRIDDAVALAKRNQKRLAI-NNVCVEQSNWFSALNNKKFDLIVTNPPYIEYNDKH 196 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P +L GL+ + I +L+ +G +E G+ Q V IF Sbjct: 197 LHQGDVR-FEPLSALVADDAGLADIKQIITQSRDYLHSNGYLLIEHGFEQSAAVRHIFNQ 255 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 V+ KD G NDRV Sbjct: 256 MAFINVSTVKDLGNNDRVTFGQ 277 >gi|293409599|ref|ZP_06653175.1| hypothetical protein ECEG_00538 [Escherichia coli B354] gi|331672744|ref|ZP_08373530.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli TA280] gi|291470067|gb|EFF12551.1| hypothetical protein ECEG_00538 [Escherichia coli B354] gi|331069965|gb|EGI41334.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli TA280] Length = 277 Score = 286 bits (732), Expect = 3e-75, Method: Composition-based stats. Identities = 91/262 (34%), Positives = 126/262 (48%), Gaps = 8/262 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 RD+ L VTG ++ ++ L D Q L + R E I + G R+F++ Sbjct: 20 PRRDAEILLEHVTGKGRTFILAFGETQLTDEQCQQLDALLTRRRDGEPIAHLTGVREFWS 79 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +S T PRP+TE LV+ ALA RILDLGTGTGA+ LAL E P Sbjct: 80 LPLFVSPATLIPRPDTECLVEQALARL-----PEQPCRILDLGTGTGAIALALASERPDC 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181 + VD A+ +A+ NA N + LQSDWFS++ G F +IVSNPPYI+ Sbjct: 135 EITAVDRMPDAVSLAQRNAQ-NLAIKNIHILQSDWFSALAGHQFAMIVSNPPYIDEQDPH 193 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P +L G++ I + L G +E G+ Q V + F Sbjct: 194 LQQGDVR-FEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFIH 252 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 V +DYG N+RV L Sbjct: 253 AGYHDVETCRDYGDNERVTLGR 274 >gi|91206058|ref|YP_538413.1| bifunctional N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase/tRNA (m7G46) methyltransferase [Rickettsia bellii RML369-C] gi|122425238|sp|Q1RH40|HEMK_RICBR RecName: Full=Bifunctional methyltransferase; Includes: RecName: Full=HemK protein homolog; Includes: RecName: Full=tRNA (guanine-N(7)-)-methyltransferase; AltName: Full=tRNA(m7G46)-methyltransferase gi|91069602|gb|ABE05324.1| Methylase of polypeptide chain release factors [Rickettsia bellii RML369-C] Length = 556 Score = 286 bits (732), Expect = 3e-75, Method: Composition-based stats. Identities = 82/282 (29%), Positives = 142/282 (50%), Gaps = 23/282 (8%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 ++ L ++ +P+ L+ + + + R LKHE I ILG ++FY Sbjct: 23 NPKLEARILLQHAINKPYEYLLANPEKQLNQLEIEAVEKVLERRLKHEPIAYILGTKEFY 82 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPR-------------------IEKRDVVR-- 100 + ++ PR +TE+L+D L + ++ R+ ++ Sbjct: 83 SREFIVNKHVLIPRNDTEILIDVVLQYHSQHSLCHSSNGGNPDKKQLDSVVKPRNNIKSS 142 Query: 101 -ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 IL+LGTG+G + ++LL E P + DIS A+E+AKSNA+ + V++R + S+WF Sbjct: 143 NILELGTGSGCISISLLLELPNSQITATDISIDAIEVAKSNAIKHDVTDRLQIIHSNWFE 202 Query: 160 SV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 ++ + FD+IVSNPPYI + +E +++P I+L DGL Y+ IA+ + L Sbjct: 203 NIGKQKFDLIVSNPPYISINEKPEMAIETINYEPSIALFAEEDGLLSYKIIAENAKKFLK 262 Query: 219 KDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 ++G +EIGY Q V +IF + N +D ++RV+ Sbjct: 263 QNGKIILEIGYKQADQVSQIFLDHGYVIDNIHQDLQSHNRVI 304 >gi|238019081|ref|ZP_04599507.1| hypothetical protein VEIDISOL_00943 [Veillonella dispar ATCC 17748] gi|237864336|gb|EEP65626.1| hypothetical protein VEIDISOL_00943 [Veillonella dispar ATCC 17748] Length = 289 Score = 286 bits (732), Expect = 3e-75, Method: Composition-based stats. Identities = 84/264 (31%), Positives = 126/264 (47%), Gaps = 9/264 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 D L V G + D L + + K + I+G +DF Sbjct: 27 PRLDGEVLLSHVLGKDRIYLYTHYDQPLIQEELDAFRPLVQERAKGHCVAAIIGEKDFMG 86 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + ++ PRP+TE L++ L K VRILD+ TG G + L+LL P Sbjct: 87 LTFKVNDKVLIPRPDTETLIEHVLG----AYPKDSKVRILDVCTGPGTILLSLLHYLPNA 142 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG---LFDVIVSNPPYIESVI 179 GVG++IS AL +A+ N +++R L+SD FS+++G FD+IVSNPPYI + Sbjct: 143 CGVGLEISTDALTVAEENRERFNLNDRVQLLESDMFSALDGKAEKFDLIVSNPPYIRTGD 202 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 L +V + +P I+L GG DGL YR +A +L G + EIGY+Q +V + Sbjct: 203 AKLLSQDVLN-EPHIALFGGEDGLEFYRILAKACGTYLKPQGRIAFEIGYDQAEEVKSLL 261 Query: 240 ESRK-LFLVNAFKDYGGNDRVLLF 262 + + D GGN+RV+ Sbjct: 262 KEAGHYSNIQCIADLGGNNRVVTA 285 >gi|307265647|ref|ZP_07547200.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Thermoanaerobacter wiegelii Rt8.B1] gi|326389250|ref|ZP_08210818.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Thermoanaerobacter ethanolicus JW 200] gi|306919291|gb|EFN49512.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Thermoanaerobacter wiegelii Rt8.B1] gi|325994613|gb|EGD53037.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Thermoanaerobacter ethanolicus JW 200] Length = 279 Score = 286 bits (732), Expect = 3e-75, Method: Composition-based stats. Identities = 81/263 (30%), Positives = 130/263 (49%), Gaps = 9/263 (3%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 ++ L G+ +I+ + +++ + + H I+ + F Sbjct: 20 NPKLEAELLLAYCLGMDRINLIIKREDEVEEGELAKFLGLLNMRKSHIPYQYIVKKQHFM 79 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 + + + PRPETE+LV+ L R+E+ +V ILD+GTG+GA+ +++ K Sbjct: 80 GLEFFVDENVLIPRPETEILVEEVLK----RVERGNV--ILDIGTGSGAIAVSISKYFAD 133 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVI 179 VDIS KA+E+AK NA GV +R ++SD F ++ FD IVSNPPYI+ Sbjct: 134 CTVYAVDISKKAIEVAKYNAEKQGVLDRIFFIESDLFRNLPPNLKFDFIVSNPPYIKRNE 193 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 ++ L EV+ +P ++LDGG DGL Y+ I ++ G EIGY QK ++ Sbjct: 194 IELLQEEVKK-EPIVALDGGEDGLFFYKKIIKEAPFYMKSGGKIGFEIGYGQKEEITNFL 252 Query: 240 ESRKLFLVNAFKDYGGNDRVLLF 262 E + KD G DRV++ Sbjct: 253 EKDGFKDIEIIKDLAGIDRVIIA 275 >gi|145632950|ref|ZP_01788683.1| HemK [Haemophilus influenzae 3655] gi|144986606|gb|EDJ93172.1| HemK [Haemophilus influenzae 3655] Length = 292 Score = 286 bits (732), Expect = 3e-75, Method: Composition-based stats. Identities = 98/270 (36%), Positives = 147/270 (54%), Gaps = 12/270 (4%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 + D+ L TG Q++ D+ +D++ R LT + R LK E I ILG ++F+ Sbjct: 22 NSKIDALVLLQHATGKLRTQILAFDDTEIDEKVRLKLTALLDRRLKGEPIAYILGEKEFW 81 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALLKESP 120 ++ L +S T PRP+TE LV+ AL +L ++E+ RILDLGTGTGA+ LAL E Sbjct: 82 SLPLNVSKGTLIPRPDTESLVEKALQIALEKLEENPPHFRILDLGTGTGAIALALASELA 141 Query: 121 FF--------KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNP 172 + +GVD+ + +A+SNA N + LQS WF ++ G FD+IVSNP Sbjct: 142 PICQKRHIPLEIIGVDLMPDVVALAQSNAERNQL--NVQFLQSRWFDNITGQFDLIVSNP 199 Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232 PYI++ +VR F+P +L +G + R I + S +LN +G+ +E G+ Q Sbjct: 200 PYIDAQDEHLHQGDVR-FEPLSALVANDEGYADLRHIIELASSYLNSNGVLLLEHGWQQG 258 Query: 233 VDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262 V IF+ +V +DYG N+RV L Sbjct: 259 EKVRSIFQENHWEMVETVRDYGDNERVTLG 288 >gi|222149910|ref|YP_002550867.1| protoporphyrinogen oxidase [Agrobacterium vitis S4] gi|221736892|gb|ACM37855.1| protoporphyrinogen oxidase [Agrobacterium vitis S4] Length = 293 Score = 285 bits (731), Expect = 3e-75, Method: Composition-based stats. Identities = 118/262 (45%), Positives = 166/262 (63%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 A RD+ + + + GL+S +IV + VL + + A+ R L E +HRILG R FY Sbjct: 26 DAPRDARTLIAGLLGLTSTDLIVQDNRVLSAEETSLIETAVERRLLFEPVHRILGRRAFY 85 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 + L LS T EPRP+TE+L++ L + K VR+LD+GTGTGA+ LALL+E P Sbjct: 86 GLELALSPATLEPRPDTEILIERVLPHLHAMVAKNGSVRLLDMGTGTGAIALALLQECPG 145 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181 + DIS +AL +A+ NA N +S+RF+TLQS W+ ++ G FD+I+SNPPYI S ++ Sbjct: 146 TTALATDISAEALAMARQNAAANSLSDRFETLQSHWYEALSGRFDIILSNPPYIVSDVIK 205 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 L +VR +DP ++LDGG DGL YR IA G + L GL VEIGY+Q + V ++F + Sbjct: 206 DLAPDVRLYDPAVALDGGDDGLDAYRAIAAGAADFLKPGGLVGVEIGYDQAMAVTQLFAN 265 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 LV + KD+G NDR+LLF Sbjct: 266 NSFVLVESAKDHGDNDRILLFA 287 >gi|121534883|ref|ZP_01666702.1| modification methylase, HemK family [Thermosinus carboxydivorans Nor1] gi|121306482|gb|EAX47405.1| modification methylase, HemK family [Thermosinus carboxydivorans Nor1] Length = 289 Score = 285 bits (731), Expect = 3e-75, Method: Composition-based stats. Identities = 89/263 (33%), Positives = 134/263 (50%), Gaps = 6/263 (2%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 D+ L + G + ++ D L+ + A+ + + + I G ++F Sbjct: 30 PRLDAEVLLSHILGRDRLYLYLNYDQPLEPAELAAFREAVKKRVLRVPVAYITGHKEFMG 89 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + ++SD PRP+TE+LV++ALA R+ +LDLGTG+GA+ ++LL Sbjct: 90 LDFIVTSDVLVPRPDTEVLVEAALA----RLAGVSTPVVLDLGTGSGAIIVSLLHRLQAA 145 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181 G+GVDIS AL +A++NA +GV+ R Q D F+ V G FD IV+NPPYI + Sbjct: 146 TGIGVDISPGALAVARANAQKHGVAARLALKQGDLFAPVAGQAFDAIVANPPYIPDGDIA 205 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 L EVR +PR +L GG DGL YR I HL +VE+G Q V + Sbjct: 206 GLEPEVR-HEPRTALAGGADGLDFYRRIVAMAPGHLKDGAFLAVEVGCGQAAAVAGLAAV 264 Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264 L + +DY G +RV++ R Sbjct: 265 SGLGVEAVIRDYAGIERVVVMRR 287 >gi|262170843|ref|ZP_06038521.1| Polypeptide chain release factor methylase [Vibrio mimicus MB-451] gi|261891919|gb|EEY37905.1| Polypeptide chain release factor methylase [Vibrio mimicus MB-451] Length = 286 Score = 285 bits (731), Expect = 4e-75, Method: Composition-based stats. Identities = 91/263 (34%), Positives = 127/263 (48%), Gaps = 9/263 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 D+ LC V ++ PD L++ L + R + E I ILG R+F++ Sbjct: 24 PALDAAVLLCHVLAKPRSYLLTWPDKTLEEPALVSLNALLARRMAGEPIAYILGEREFWS 83 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +S T PRP+TE LV+ AL + +LDLGTGTGA+ LAL E P Sbjct: 84 LPLKVSPSTLIPRPDTERLVELALEKA-----ALIEGELLDLGTGTGAIALALASELPLR 138 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIV 180 + G+D+ +A E+A+ NA + LQ WFS + F +IVSNPPYIE Sbjct: 139 RVTGIDLRPEAAELAQENATRLSILNT-QFLQGSWFSPLADGTKFALIVSNPPYIEENDP 197 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 +VR F+P+ +L +GL+ R I+ R L + G E GY+Q V I Sbjct: 198 HLNLGDVR-FEPKSALVAEENGLADIRYISTHAPRFLLEGGWLLFEHGYDQGEAVRTILR 256 Query: 241 SRKLFLVNAFKDYGGNDRVLLFC 263 V +DY GNDRV L Sbjct: 257 ELGYQSVTTEQDYAGNDRVTLGQ 279 >gi|194436964|ref|ZP_03069063.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli 101-1] gi|253773789|ref|YP_003036620.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254161294|ref|YP_003044402.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli B str. REL606] gi|297517276|ref|ZP_06935662.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli OP50] gi|300920410|ref|ZP_07136844.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS 115-1] gi|300928242|ref|ZP_07143779.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS 187-1] gi|301648135|ref|ZP_07247888.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS 146-1] gi|307137827|ref|ZP_07497183.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli H736] gi|331641742|ref|ZP_08342877.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli H736] gi|194423947|gb|EDX39935.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli 101-1] gi|242376991|emb|CAQ31714.1| protein-(glutamine-N5) methyltransferase [Escherichia coli BL21(DE3)] gi|253324833|gb|ACT29435.1| modification methylase, HemK family [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253973195|gb|ACT38866.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli B str. REL606] gi|253977409|gb|ACT43079.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli BL21(DE3)] gi|300412543|gb|EFJ95853.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS 115-1] gi|300463711|gb|EFK27204.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS 187-1] gi|301073721|gb|EFK88527.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS 146-1] gi|309701511|emb|CBJ00818.1| protein methyltransferase hemk (protein-glutamine N methyltransferase) [Escherichia coli ETEC H10407] gi|315615946|gb|EFU96572.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli 3431] gi|323937933|gb|EGB34197.1| protein-(glutamine-N5) methyltransferase [Escherichia coli E1520] gi|323962790|gb|EGB58368.1| protein-(glutamine-N5) methyltransferase [Escherichia coli H489] gi|323973390|gb|EGB68577.1| protein-(glutamine-N5) methyltransferase [Escherichia coli TA007] gi|331038540|gb|EGI10760.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli H736] gi|332342794|gb|AEE56128.1| protein-(glutamine-N5) methyltransferase HemK [Escherichia coli UMNK88] Length = 277 Score = 285 bits (731), Expect = 4e-75, Method: Composition-based stats. Identities = 90/262 (34%), Positives = 125/262 (47%), Gaps = 8/262 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 RD+ L VTG ++ ++ L D Q L + R E I + G R+F++ Sbjct: 20 PRRDAEILLEHVTGKGRTFILAFGETQLTDEQCQQLDALLTRRRDGEPIAHLTGVREFWS 79 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +S T PRP+TE LV+ ALA RILDLGTGTGA+ LAL E P Sbjct: 80 LPLFVSPATLIPRPDTECLVEQALARL-----PEQPCRILDLGTGTGAIALALASERPDC 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181 + VD A+ +A+ NA + LQSDWFS++ G F +IVSNPPYI+ Sbjct: 135 EITAVDRMPDAVALAQRNAQHLAIK-NIRILQSDWFSALAGQQFTMIVSNPPYIDEQDPH 193 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P +L G++ I + L G +E G+ Q V + F Sbjct: 194 LQQGDVR-FEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFIL 252 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 V +DYG N+RV L Sbjct: 253 AGYHDVETCRDYGDNERVTLGR 274 >gi|308271576|emb|CBX28184.1| Protein methyltransferase hemK [uncultured Desulfobacterium sp.] Length = 307 Score = 285 bits (731), Expect = 4e-75, Method: Composition-based stats. Identities = 91/262 (34%), Positives = 137/262 (52%), Gaps = 5/262 (1%) Query: 7 SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66 + L G + + D L+ +R + I R + E + I+G ++F+++ L Sbjct: 44 AEILLAHTLGFKRIDLYLRHDQPLNVGERNLFKSLIRRRISKEPVAYIVGSKEFWSLELV 103 Query: 67 LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126 +S D PRPETE LV+ AL L + + RIL+LGTG+GA+ LA+ ++P + Sbjct: 104 VSKDVLIPRPETECLVEEAL-LVLDKDKVSAPKRILELGTGSGAIILAMATQNPDQQYFA 162 Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG---LFDVIVSNPPYIESVIVDCL 183 DIS AL +A +NA G+ E+ D W S ++ LFD+I+SNPPYI + L Sbjct: 163 SDISINALAVALNNARHLGLDEKIDLFCGSWVSPLKENNNLFDIIISNPPYIRRGDIKTL 222 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 E+ F+P +LDGG DGL+ + I + LNK G +EIGY+QK V I + Sbjct: 223 QPEINRFEPINALDGGEDGLACIKHIIKNAHKFLNKSGTLLLEIGYDQKKAVDEIIKETG 282 Query: 244 -LFLVNAFKDYGGNDRVLLFCR 264 + KDY G DRV+ + Sbjct: 283 RYAQASFRKDYSGFDRVVCAKK 304 >gi|323964711|gb|EGB60182.1| protein-(glutamine-N5) methyltransferase [Escherichia coli M863] gi|327253902|gb|EGE65531.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli STEC_7v] Length = 277 Score = 285 bits (730), Expect = 4e-75, Method: Composition-based stats. Identities = 90/262 (34%), Positives = 127/262 (48%), Gaps = 8/262 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 RD+ L VTG ++ ++ L D Q L + R E I + G R+F++ Sbjct: 20 PRRDAEILLEHVTGKGRTFILAFGETQLTDEQCQQLDALLTRRRDGEPIAHLTGVREFWS 79 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +S T PRP+TE LV+ ALA RILDLGTGTGA+ LAL E P Sbjct: 80 LPLFVSPATLIPRPDTECLVEQALARL-----PEQPCRILDLGTGTGAIALALASERPDC 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181 + VD A+ +A+ NA N + LQS+WFS++ G F +IVSNPPYI+ Sbjct: 135 EITAVDRMPDAIALAQRNAQ-NLAIKNIHILQSNWFSALAGQQFAMIVSNPPYIDEQDPH 193 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P +L G++ I + L G +E G+ Q V ++F Sbjct: 194 LQQGDVR-FEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQVFIH 252 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 V +DYG N+RV L Sbjct: 253 AGYHDVETCRDYGDNERVTLGR 274 >gi|215486444|ref|YP_002328875.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli O127:H6 str. E2348/69] gi|312966452|ref|ZP_07780674.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli 2362-75] gi|215264516|emb|CAS08883.1| N5-glutamine methyltransferase, modifies release factors RF-1 and RF-2 [Escherichia coli O127:H6 str. E2348/69] gi|312288905|gb|EFR16803.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli 2362-75] Length = 277 Score = 285 bits (730), Expect = 4e-75, Method: Composition-based stats. Identities = 90/262 (34%), Positives = 125/262 (47%), Gaps = 8/262 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 RD+ L VTG ++ ++ L D Q L + R E I + G R+F++ Sbjct: 20 PRRDAEILLEHVTGKGRTFILAFGETQLTDEQCQQLDALLTRRRDGEPIAHLTGVREFWS 79 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +S T PRP+TE LV+ ALA RILDLGTGTGA+ LAL E P Sbjct: 80 LPLFVSPATLIPRPDTECLVEQALARL-----PEQPCRILDLGTGTGAIALALASERPDC 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181 + VD A+ +A+ NA + LQSDWFS++ G F +IVSNPPYI+ Sbjct: 135 EITAVDRMPDAVALAQRNAQHLTIK-NIHILQSDWFSALAGQQFAMIVSNPPYIDEQDPH 193 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P +L G++ I + L G +E G+ Q V + F Sbjct: 194 LQQGDVR-FEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFIL 252 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 V +DYG N+RV L Sbjct: 253 AGYHDVETCRDYGDNERVTLGR 274 >gi|302875889|ref|YP_003844522.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Clostridium cellulovorans 743B] gi|307689322|ref|ZP_07631768.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Clostridium cellulovorans 743B] gi|302578746|gb|ADL52758.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Clostridium cellulovorans 743B] Length = 283 Score = 285 bits (730), Expect = 4e-75, Method: Composition-based stats. Identities = 86/263 (32%), Positives = 128/263 (48%), Gaps = 7/263 (2%) Query: 4 LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63 D+ L + +I++ +D N I + + ILG F + Sbjct: 23 REDALDLLSNILKKDRLYLIINGLDEVDKESEDIFFNFIEERGRKRPLQYILGNATFMEL 82 Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 + PR +TE+LV+ L + I+K + I D+ TGTGA+ +A+ P Sbjct: 83 SFKVKEGVLIPRADTEILVEEVLNY----IDKNNYKDICDVCTGTGAIGIAIGYHRPTTT 138 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG---LFDVIVSNPPYIESVIV 180 DIS A EIAK N V + + +SD S EG +DVIVSNPPYI + ++ Sbjct: 139 IDICDISEIAEEIAKENIFKLKVEKNVEFYRSDLLSFAEGLHKKYDVIVSNPPYIRTSVI 198 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 + L +V++++P ++LDGG DGL YR I + LNK GL + EIGY+Q +V + + Sbjct: 199 EALMEDVKNYEPHLALDGGEDGLIFYRKITKDSCKFLNKGGLLAFEIGYDQGEEVSELLK 258 Query: 241 SRKLFLVNAFKDYGGNDRVLLFC 263 V KD G NDRV+L Sbjct: 259 EYGFIDVIVKKDLGNNDRVVLGR 281 >gi|89054298|ref|YP_509749.1| HemK family modification methylase [Jannaschia sp. CCS1] gi|88863847|gb|ABD54724.1| [protein release factor]-glutamine N5-methyltransferase [Jannaschia sp. CCS1] Length = 276 Score = 285 bits (730), Expect = 4e-75, Method: Composition-based stats. Identities = 96/260 (36%), Positives = 134/260 (51%), Gaps = 9/260 (3%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVL-DDRQRFFLTNAIVRSLKHESIHRILGWRDF 60 +A R++ +C +SS Q+ D A + + +I+G +F Sbjct: 20 EAEREARLLMCHALKISSAQLYARLDETWPTGPPFQLFVEACEARKSRQPLSQIIGEVEF 79 Query: 61 YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120 Y R ++SD PRP+TE LVD AL+ R+LDLGTG+G V LL E P Sbjct: 80 YGRRFFVNSDVLTPRPDTETLVDQALSGGFE--------RVLDLGTGSGCVLATLLAERP 131 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180 GVG D+S ALE+A N GV +R + SDWF +V+G FD+I+SNPPYI + + Sbjct: 132 GSNGVGTDLSQPALEVAARNVARQGVQDRAVLVHSDWFEAVQGQFDLILSNPPYIAAAEM 191 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 L EVRD++P ++L G DGL+ YR I HL G VEIG +Q V +F Sbjct: 192 RGLAPEVRDWEPHVALTPGGDGLTAYRIITAAGPMHLRAGGRLMVEIGLDQGAAVAELFR 251 Query: 241 SRKLFLVNAFKDYGGNDRVL 260 + V +D G+DRV+ Sbjct: 252 AAGFGDVRITQDLSGHDRVV 271 >gi|152979100|ref|YP_001344729.1| HemK family modification methylase [Actinobacillus succinogenes 130Z] gi|150840823|gb|ABR74794.1| modification methylase, HemK family [Actinobacillus succinogenes 130Z] Length = 286 Score = 285 bits (730), Expect = 4e-75, Method: Composition-based stats. Identities = 94/266 (35%), Positives = 143/266 (53%), Gaps = 10/266 (3%) Query: 1 MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60 + A D++ L VT + Q+I D+VLD++ LT + R E + ILG +F Sbjct: 24 LNAKFDANLLLQSVTQKTKSQIIAFSDTVLDEKTLQNLTALLNRRATGEPVAYILGETEF 83 Query: 61 YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120 + + L +S T PRP+TE+LV+ AL RI +D V +LDLGTGTGA+ L+L KE Sbjct: 84 WTLSLKVSPHTLIPRPDTEILVERALE----RIPLKDGVSVLDLGTGTGAIALSLAKELK 139 Query: 121 ----FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE 176 + +GVD+ +A+ +A+ NA N + + + +S WF+++ FD++VSNPPYI+ Sbjct: 140 KRGQKYWVLGVDLMPEAVVLAQRNAERNQLDD-VEFRRSSWFNNIHETFDLVVSNPPYID 198 Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236 + +VR F+P +L G + R I + R+LN G +E G+ Q V Sbjct: 199 ADDAHLTQGDVR-FEPLSALIAEEQGYADLRHIIEQTPRYLNPQGWLLLEHGWRQGEKVR 257 Query: 237 RIFESRKLFLVNAFKDYGGNDRVLLF 262 F+ V KDYG N+RV L Sbjct: 258 SFFDENLWEKVATVKDYGDNERVTLA 283 >gi|322513488|ref|ZP_08066598.1| protein methyltransferase HemK [Actinobacillus ureae ATCC 25976] gi|322120707|gb|EFX92591.1| protein methyltransferase HemK [Actinobacillus ureae ATCC 25976] Length = 290 Score = 285 bits (730), Expect = 5e-75, Method: Composition-based stats. Identities = 93/266 (34%), Positives = 146/266 (54%), Gaps = 4/266 (1%) Query: 1 MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60 + D++ L VT S + ++ L + L + L+ E + ILG ++F Sbjct: 24 LHPKTDANILLQAVTKRSKSAIFAFSETELSQTEMSQLETLLTCRLQGEPMAYILGEKEF 83 Query: 61 YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120 +++ L +S T PRP+TE LV+ AL ++ R+E + ++ILDLGTGTGA+ LAL E Sbjct: 84 WSLPLKVSPHTLIPRPDTERLVEVALEWAYKRLEIQKTLQILDLGTGTGAIALALASELG 143 Query: 121 F-FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESV 178 + +GVD +A+ +A++N G LQSDWFS++E F++IVSNPPYI+ Sbjct: 144 DQAQIIGVDFKPEAVVLAETNRQNLGFQ-NVTFLQSDWFSALENQQFELIVSNPPYIDKQ 202 Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238 + +VR F+P +L DGLS + I R+L +G +E G+ Q V +I Sbjct: 203 DENLKYGDVR-FEPLSALVAEQDGLSDLQKIIKNAPRYLANNGALMLEHGWQQAQAVQQI 261 Query: 239 FESRKLFLVNAFKDYGGNDRVLLFCR 264 F+ + + +F+DYGGNDR+ R Sbjct: 262 FQQYQWDEIASFQDYGGNDRMTKAVR 287 >gi|323187442|gb|EFZ72751.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli RN587/1] Length = 277 Score = 285 bits (730), Expect = 5e-75, Method: Composition-based stats. Identities = 90/262 (34%), Positives = 125/262 (47%), Gaps = 8/262 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 RD+ L VTG ++ ++ L D Q L + R E I + G R+F++ Sbjct: 20 PRRDAEILLEHVTGKGRTFILAFGETQLTDEQCQQLDALLTRRRDGEPIAHLTGVREFWS 79 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +S T PRP+TE LV+ ALA RILDLGTGTGA+ LAL E P Sbjct: 80 LPLFVSPATLIPRPDTECLVEQALARL-----PEQPCRILDLGTGTGAIALALASERPDC 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181 + VD A+ +A+ NA + LQSDWFS++ G F +IVSNPPYI+ Sbjct: 135 EITAVDRMPDAVALAQRNAQHLAIK-NIHILQSDWFSALAGQQFAMIVSNPPYIDEQDPH 193 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P +L G++ I + L G +E G+ Q V + F Sbjct: 194 LQQGDVR-FEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFIL 252 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 V +DYG N+RV L Sbjct: 253 AGYHDVETCRDYGDNERVTLGR 274 >gi|302879737|ref|YP_003848301.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Gallionella capsiferriformans ES-2] gi|302582526|gb|ADL56537.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Gallionella capsiferriformans ES-2] Length = 288 Score = 285 bits (730), Expect = 5e-75, Method: Composition-based stats. Identities = 90/259 (34%), Positives = 130/259 (50%), Gaps = 9/259 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A + L V G++ ++ P+ +L R+ R L E I +LG R+F+ Sbjct: 34 ARIEVQCLLQSVLGVNRAYLLTHPERILTVRETARYVELFARRLAGEPIAYLLGEREFFG 93 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + ++ T PRP+TELLV+ AL +LD+GTG+GA+ L++ +E P Sbjct: 94 LNFKVTPATLIPRPDTELLVEMALQHI------PAGGAVLDMGTGSGAIALSIARERPDA 147 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181 + V VD S AL +A NA + R L+SDWFS++ G FD+I SNPPYIE+ V Sbjct: 148 RVVAVDASEAALIVAAENAQRLNLG-RVRLLRSDWFSALSGERFDLIASNPPYIENGDVH 206 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P +L G DGL R I +LN G E GYNQ V + + Sbjct: 207 LSLGDVR-FEPLSALASGADGLDDIRRIIVEAKAYLNAGGWLMFEHGYNQAERVRGLLQD 265 Query: 242 RKLFLVNAFKDYGGNDRVL 260 F V++ D G +RV Sbjct: 266 AGFFGVSSVLDLSGIERVT 284 >gi|261253597|ref|ZP_05946170.1| Polypeptide chain release factor methylase [Vibrio orientalis CIP 102891] gi|260936988|gb|EEX92977.1| Polypeptide chain release factor methylase [Vibrio orientalis CIP 102891] Length = 286 Score = 285 bits (730), Expect = 5e-75, Method: Composition-based stats. Identities = 88/261 (33%), Positives = 126/261 (48%), Gaps = 9/261 (3%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 D+ LC ++ PD +LD +Q + + R L E + I+G R+F+++ Sbjct: 28 LDAAVLLCHALDKPRSFLLTWPDKILDAQQLAAFDDLLQRRLTGEPVAYIVGEREFWSLP 87 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L +S T PRP+TE LV+ AL ++ ILDLGTGTGA+ LAL E P + Sbjct: 88 LKVSPTTLIPRPDTERLVEIALDKAMQMDGD-----ILDLGTGTGAIALALASELPQRQV 142 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDC 182 G+D+ A ++A+SNA +S L WF + F +IVSNPPYIE Sbjct: 143 TGIDLKQDAQQLAQSNASALNLSNT-QFLAGSWFEPLAAGTEFALIVSNPPYIEKEDPHL 201 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 +VR F+P +L GL+ + IA +L G E G+ Q V + S Sbjct: 202 TQGDVR-FEPLSALVADEKGLADIKHIATQARDYLMDSGWLMFEHGFEQGEPVRELLRSL 260 Query: 243 KLFLVNAFKDYGGNDRVLLFC 263 V +KDYG NDRV + Sbjct: 261 GYDQVATYKDYGDNDRVTIGQ 281 >gi|301017244|ref|ZP_07182025.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS 69-1] gi|300400375|gb|EFJ83913.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS 69-1] Length = 277 Score = 285 bits (730), Expect = 5e-75, Method: Composition-based stats. Identities = 91/262 (34%), Positives = 126/262 (48%), Gaps = 8/262 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 RD+ L VTG ++ ++ L D Q L + R E I + G R+F++ Sbjct: 20 PRRDAEILLEHVTGRGRTFILAFGETQLTDEQCQQLDALLTRRRDGEPIAHLTGVREFWS 79 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +S T PRP+TE LV+ ALA RILDLGTGTGA+ LAL E P Sbjct: 80 LPLFVSPATLIPRPDTECLVEQALARL-----PEQPCRILDLGTGTGAIALALASERPDC 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181 + VD A+ +A+ NA N + LQSDWFS++ G F +IVSNPPYI+ Sbjct: 135 EITAVDRMPDAVALAQRNAQ-NLAIKNIHILQSDWFSALAGQQFAMIVSNPPYIDEQDPH 193 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P +L G++ I + L G +E G+ Q V + F Sbjct: 194 LQQGDVR-FEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFIH 252 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 V +DYG N+RV L Sbjct: 253 AGYHDVETCRDYGDNERVTLGR 274 >gi|315634082|ref|ZP_07889371.1| protein methyltransferase HemK [Aggregatibacter segnis ATCC 33393] gi|315477332|gb|EFU68075.1| protein methyltransferase HemK [Aggregatibacter segnis ATCC 33393] Length = 299 Score = 285 bits (730), Expect = 5e-75, Method: Composition-based stats. Identities = 93/270 (34%), Positives = 140/270 (51%), Gaps = 15/270 (5%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L VT S ++ ++ LD++ + LT + R L+ E I +LG ++F+++ L Sbjct: 26 DAQVLLQFVTQKSRAFILAFGETALDEKTQEKLTALLSRRLQGEPIAYLLGEKEFWSLPL 85 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEK----RDVVRILDLGTGTGAVCLALLKESP- 120 +S+ T PRP+TE+LV+ A+A S ++K RILDLGTGTGA+ LAL E Sbjct: 86 NVSAGTLIPRPDTEILVEKAVAISAEALQKCGQNSQCFRILDLGTGTGAIALALASELKP 145 Query: 121 -------FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173 + +GVD+ + +A SNA N + LQS WF + G FD+IVSNPP Sbjct: 146 IAQKQQIQLEVIGVDVMPNVVALATSNAEKNQLG--VSFLQSHWFDKMTGTFDLIVSNPP 203 Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233 YI++ +VR F+P +L +G + R I + + G VE G+ Q Sbjct: 204 YIDAKDEHLTQGDVR-FEPLSALVAEEEGYADLRHIIANAPKFMRTGGYLLVEHGWQQGE 262 Query: 234 DVVRIFESRKLFLVNAFKDYGGNDRVLLFC 263 V IF+ + +DYG N+RV L C Sbjct: 263 KVRSIFQENFWTSIETLRDYGNNERVTLGC 292 >gi|86148711|ref|ZP_01066988.1| HemK protein [Vibrio sp. MED222] gi|85833504|gb|EAQ51685.1| HemK protein [Vibrio sp. MED222] Length = 290 Score = 285 bits (729), Expect = 5e-75, Method: Composition-based stats. Identities = 86/266 (32%), Positives = 122/266 (45%), Gaps = 15/266 (5%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ LC ++ P+ L Q + R L E + I+G R+F+++ L Sbjct: 29 DAAVLLCHALDKPRSYLLTWPEKHLTSEQESEFHTLLKRRLTGEPVAYIVGEREFWSLPL 88 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 +S T PRP+TE LV+ AL + ILDLGTGTGA+ LAL E Sbjct: 89 KVSPSTLIPRPDTERLVEVALDKTY-----GKQGAILDLGTGTGAIALALASEMSNRPVT 143 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--------LFDVIVSNPPYIES 177 G+D+ +A ++A NA ++ L WF + F +IVSNPPYIE Sbjct: 144 GIDLRPEAQQLATENAQRLNIT-NATFLHGSWFEPLNSVNSEEKAVKFSLIVSNPPYIEK 202 Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237 +VR F+P +L GL+ R I++ L +G + E GY+Q + V Sbjct: 203 NDPHLSQGDVR-FEPITALVAEEKGLADIRYISENARSFLENEGWLAFEHGYDQGLAVRE 261 Query: 238 IFESRKLFLVNAFKDYGGNDRVLLFC 263 I + V KDYGGNDRV L Sbjct: 262 IMLALGYLDVVTEKDYGGNDRVTLGR 287 >gi|300939552|ref|ZP_07154209.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS 21-1] gi|300455556|gb|EFK19049.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS 21-1] Length = 277 Score = 285 bits (729), Expect = 5e-75, Method: Composition-based stats. Identities = 91/262 (34%), Positives = 126/262 (48%), Gaps = 8/262 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 RD+ L VTG ++ ++ L D Q L + R E I + G R+F++ Sbjct: 20 PRRDAEILLEHVTGRGRTFILAFGETQLTDEQCQQLDALLTRRRDGEPIAHLTGVREFWS 79 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +S T PRP+TE LV+ ALA RILDLGTGTGA+ LAL E P Sbjct: 80 LPLFVSPATLIPRPDTECLVEQALARL-----PEQPCRILDLGTGTGAIALALASERPDC 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181 + VD A+ +A+ NA N + LQSDWFS++ G F +IVSNPPYI+ Sbjct: 135 EITAVDCMPDAVSLAQRNAQ-NLAIKNIHILQSDWFSALAGQQFAMIVSNPPYIDEQDPH 193 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P +L G++ I + L G +E G+ Q V + F Sbjct: 194 LQQGDVR-FEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFIH 252 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 V +DYG N+RV L Sbjct: 253 AGYHDVETCRDYGDNERVTLGR 274 >gi|261496508|ref|ZP_05992888.1| protein-glutamine N-methyltransferase [Mannheimia haemolytica serotype A2 str. OVINE] gi|261307711|gb|EEY09034.1| protein-glutamine N-methyltransferase [Mannheimia haemolytica serotype A2 str. OVINE] Length = 363 Score = 285 bits (729), Expect = 5e-75, Method: Composition-based stats. Identities = 94/262 (35%), Positives = 143/262 (54%), Gaps = 4/262 (1%) Query: 1 MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60 + A D++ L VT S + ++VL +R+ L + R K E + ILG+R+F Sbjct: 99 LNAKFDANLLLQAVTKRSKSAIFAFSETVLSERELVELAEKLARRAKGEPMAYILGYREF 158 Query: 61 YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES- 119 +++ L +S T PRP+TE LV+ AL ++ R+E + +++ILDLGTGTGA+ LAL E Sbjct: 159 WSLPLKVSPATLIPRPDTERLVELALEYANKRLENQKMLQILDLGTGTGAIALALASELG 218 Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESV 178 + +GVD +A+++A+ N G+ + LQSDWFSS+ FD+IVSNPPYI+ Sbjct: 219 EKAQIIGVDFQNEAVQLAEENRQHLGL-NQVTFLQSDWFSSLANQQFDLIVSNPPYIDEA 277 Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238 + +VR F+P +L GLS + I +L G +E + Q V + Sbjct: 278 DENLTVGDVR-FEPLTALVADNKGLSDLQKIIQNAPLYLKPQGALMLEHSWQQGNAVRDL 336 Query: 239 FESRKLFLVNAFKDYGGNDRVL 260 F+ V +DY GNDRV Sbjct: 337 FDLNLWEQVETAQDYAGNDRVT 358 >gi|156741368|ref|YP_001431497.1| HemK family modification methylase [Roseiflexus castenholzii DSM 13941] gi|156232696|gb|ABU57479.1| modification methylase, HemK family [Roseiflexus castenholzii DSM 13941] Length = 289 Score = 285 bits (729), Expect = 6e-75, Method: Composition-based stats. Identities = 77/260 (29%), Positives = 120/260 (46%), Gaps = 4/260 (1%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 D+ L G S +V+ + D + R E + + G ++FY Sbjct: 28 PRLDAEILLAHTLGWSRARVLARLQETIPDDALQTFRALVERRAAREPVAYLTGRKEFYG 87 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + + PRPETE LVD+AL ++ D + I D+GTG+G + + L + P Sbjct: 88 LEFVVDRRVLVPRPETEALVDAALEWARQHYSPHDTLLIADIGTGSGCIAIVLARHLPNA 147 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182 D+S AL +A+ NA +GV+ER L D + + D+ VSNPPY I++ Sbjct: 148 VVYATDLSPDALAVARQNAELHGVAERITLLCGDLLAPLPQAVDLAVSNPPY---TILNE 204 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 + VR +P ++LDGG DGL+ YR + + L G +EIG Q V + Sbjct: 205 IDAGVRLHEPHLALDGGSDGLAVYRRLLATAPQALRPGGALMLEIGATQAEAVTALARQA 264 Query: 243 -KLFLVNAFKDYGGNDRVLL 261 V+ +D G DRV++ Sbjct: 265 FPAAAVHMLRDLAGWDRVVV 284 >gi|149907579|ref|ZP_01896326.1| peptide release factor-glutamine N5-methyltransferase [Moritella sp. PE36] gi|149809249|gb|EDM69178.1| peptide release factor-glutamine N5-methyltransferase [Moritella sp. PE36] Length = 279 Score = 285 bits (729), Expect = 6e-75, Method: Composition-based stats. Identities = 90/264 (34%), Positives = 129/264 (48%), Gaps = 10/264 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 D+ LC + + D V+DD T I+R E + ILG+R+F++ Sbjct: 21 PKLDAEVILCFLLEKDRSYLFTWDDKVMDDDIIRRFTALIMRRQAGEPVAHILGYREFWS 80 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +S+DT PRP+TE+LV+ ALA ++LDLGTGTGA+ LAL ESP Sbjct: 81 LELEVSADTLIPRPDTEILVEQALACM-----PTHACQVLDLGTGTGAIALALASESPQA 135 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIESVIV 180 ++ A +A+ N G LQ WF ++ FDVIVSNPPYI++ Sbjct: 136 TVTAIEYQQGAAALARRNVKRCGFD--VTVLQGSWFEPLKASQRFDVIVSNPPYIDAHDP 193 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 +VR F+P +L +GL+ + I + L DG VE G+ Q V +F Sbjct: 194 HLAMGDVR-FEPLTALVAADNGLADLKHIISQGYQFLTVDGWLLVEHGFEQGAAVRALFT 252 Query: 241 SRKLFLVNAFKDYGGNDRVLLFCR 264 + V KDYG NDR+ + R Sbjct: 253 ASNYHQVVTHKDYGNNDRITVGQR 276 >gi|145634874|ref|ZP_01790581.1| HemK [Haemophilus influenzae PittAA] gi|145267740|gb|EDK07737.1| HemK [Haemophilus influenzae PittAA] Length = 292 Score = 285 bits (729), Expect = 6e-75, Method: Composition-based stats. Identities = 95/270 (35%), Positives = 143/270 (52%), Gaps = 12/270 (4%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 + D+ L TG Q++ D+ +D++ R LT + R L E I ILG ++F+ Sbjct: 22 NSKIDALVLLQYATGKPRTQILAFDDTEIDEKVRLKLTALLDRRLNGEPIAYILGEKEFW 81 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALLKESP 120 ++ L +S T PRP+TE+LV+ AL +L ++E+ RILDLGTGTGA+ LAL E Sbjct: 82 SLPLNVSKGTLIPRPDTEILVEKALQIALVKLEENPPHFRILDLGTGTGAIALALASELS 141 Query: 121 FF--------KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNP 172 + +GVD+ + +A+SNA N + + LQS WF ++ G FD+I SNP Sbjct: 142 SICQKRQISLEIIGVDLMPDVVALAQSNAERNQL--NVEFLQSRWFENITGQFDLIASNP 199 Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232 PYI++ +VR F+P +L G + R I + +LN +G +E G+ Q Sbjct: 200 PYIDAQDEHLRQGDVR-FEPLSALVANDAGYADLRYIIESAPNYLNSNGALLLEHGWQQG 258 Query: 233 VDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262 V IF +V +DYG N+RV L Sbjct: 259 EKVRSIFLENHWEIVETVRDYGDNERVTLG 288 >gi|71278012|ref|YP_270225.1| HemK family modification methylase [Colwellia psychrerythraea 34H] gi|71143752|gb|AAZ24225.1| modification methylase, HemK family [Colwellia psychrerythraea 34H] Length = 285 Score = 285 bits (729), Expect = 6e-75, Method: Composition-based stats. Identities = 83/259 (32%), Positives = 130/259 (50%), Gaps = 7/259 (2%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A D+ LC V ++ P+ + ++ + R + E I I+G ++F++ Sbjct: 24 AKLDAQILLCFVLDKERSYLLTWPEKEVTEQSEQQYLALLQRRIMGEPIAYIVGVQEFWS 83 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + +S T PRP+TE+LV+ L + D + LDLGTGTGA+ LAL E P + Sbjct: 84 LPFRVSPATLIPRPDTEVLVELVLE----HFGELDTLHCLDLGTGTGAIALALASEQPNW 139 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVD 181 + +D S A+++AK NA +S + QSDWF++V E FDVIVSNPPYI+++ Sbjct: 140 QIDAIDFSLDAVKLAKQNAQDLHLSH-VNIFQSDWFNAVNERKFDVIVSNPPYIDALDKH 198 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR +P +L GL + IA + LN G E G+ Q V I + Sbjct: 199 LSQGDVRC-EPESALVADEQGLGDIKHIAQQALKFLNTHGSLFFEHGFEQGQAVRNILTA 257 Query: 242 RKLFLVNAFKDYGGNDRVL 260 V +D+ G++R+ Sbjct: 258 LGYDNVQTVRDFNGHERIT 276 >gi|300906881|ref|ZP_07124555.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS 84-1] gi|301305582|ref|ZP_07211673.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS 124-1] gi|300401314|gb|EFJ84852.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS 84-1] gi|300839171|gb|EFK66931.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS 124-1] gi|315254828|gb|EFU34796.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli MS 85-1] Length = 277 Score = 284 bits (728), Expect = 7e-75, Method: Composition-based stats. Identities = 90/262 (34%), Positives = 126/262 (48%), Gaps = 8/262 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 RD+ L VTG ++ ++ L D Q L + R E I + G R+F++ Sbjct: 20 PRRDAEILLEHVTGKGRTFILAFGETQLTDEQCQQLDALLTRRRDGEPIAHLTGVREFWS 79 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +S T PRP+TE LV+ ALA RILDLGTGTGA+ LAL +E P Sbjct: 80 LPLFVSPATLIPRPDTECLVEQALARL-----PEQPCRILDLGTGTGAIALALARERPDC 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181 + VD A+ +A+ NA + LQSDWFS++ G F +IVSNPPYI+ Sbjct: 135 EITAVDRMPDAVALAQRNAQHLAIK-NIHILQSDWFSALAGQQFAMIVSNPPYIDEQDPH 193 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P +L G++ I + L G +E G+ Q V + F Sbjct: 194 LQQGDVR-FEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFIL 252 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 V +DYG N+RV L Sbjct: 253 AGYHDVETCRDYGDNERVTLGR 274 >gi|260767752|ref|ZP_05876687.1| Polypeptide chain release factor methylase [Vibrio furnissii CIP 102972] gi|260617261|gb|EEX42445.1| Polypeptide chain release factor methylase [Vibrio furnissii CIP 102972] Length = 278 Score = 284 bits (728), Expect = 7e-75, Method: Composition-based stats. Identities = 88/261 (33%), Positives = 130/261 (49%), Gaps = 9/261 (3%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 D+ LC ++ PD +LDD + R L E + I+G R+F+++ Sbjct: 13 LDAAVLLCHALDKPRSYLLTWPDKILDDTTHAAFDALLARRLTGEPVAYIIGEREFWSLP 72 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L +S T PRP+TE LV+ AL + + ILDLGTGTGA+ LAL E P + Sbjct: 73 LKVSPSTLIPRPDTERLVEVALEKA-----QTLDGDILDLGTGTGAIALALASELPQRRV 127 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDC 182 VG+D+ +A ++A NA ++ LQ WF + F +IVSNPPYIE Sbjct: 128 VGIDLRDEAQQLASDNANRLHLT-NVTFLQGSWFEPLSHGTKFALIVSNPPYIEENDPHL 186 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 +VR F+P+ +L +GL+ + I+D +L G + E GY+Q V I ++ Sbjct: 187 AQGDVR-FEPKSALVAADNGLADIKYISDAGRDYLQSGGWLAFEHGYDQGASVRTIMQAL 245 Query: 243 KLFLVNAFKDYGGNDRVLLFC 263 V +DY G+DRV L Sbjct: 246 GYQHVITEQDYAGHDRVTLGQ 266 >gi|82776552|ref|YP_402901.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Shigella dysenteriae Sd197] gi|309789160|ref|ZP_07683753.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Shigella dysenteriae 1617] gi|81240700|gb|ABB61410.1| possible protoporphyrinogen oxidase [Shigella dysenteriae Sd197] gi|308922914|gb|EFP68428.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Shigella dysenteriae 1617] Length = 277 Score = 284 bits (728), Expect = 7e-75, Method: Composition-based stats. Identities = 90/262 (34%), Positives = 125/262 (47%), Gaps = 8/262 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 RD+ L VTG ++ ++ L D Q L + R E I + G R+F++ Sbjct: 20 PRRDAEILLEHVTGKGRTFILAFGETQLTDEQCQQLDALLTRRRDGEPIAHLTGVREFWS 79 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +S T PRP+TE LV+ ALA RILDLGTGTGA+ LAL +E P Sbjct: 80 LPLFVSPATLIPRPDTECLVEQALARL-----PEQPCRILDLGTGTGAIALALARERPDC 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181 + VD A+ +A+ NA + LQSDWFS + G F +IVSNPPYI+ Sbjct: 135 EITAVDRMPDAVALAQRNAQHLAIK-NIHILQSDWFSELAGQQFAMIVSNPPYIDEQDPH 193 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P +L G++ I + L G +E G+ Q V + F Sbjct: 194 LQQGDVR-FEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFIL 252 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 V +DYG N+RV L Sbjct: 253 AGYHDVETCRDYGDNERVTLGR 274 >gi|330009866|ref|ZP_08306622.1| protein-(glutamine-N5) methyltransferase [Klebsiella sp. MS 92-3] gi|328534692|gb|EGF61257.1| protein-(glutamine-N5) methyltransferase [Klebsiella sp. MS 92-3] Length = 283 Score = 284 bits (728), Expect = 8e-75, Method: Composition-based stats. Identities = 90/262 (34%), Positives = 131/262 (50%), Gaps = 8/262 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 RD+ L VTG + ++ ++ L + L +VR + E I ++G R+F++ Sbjct: 21 PRRDAEILLGHVTGRARTWILAFGETTLSADEAARLEALLVRRQRGEPIAHLVGQREFWS 80 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +S T PRP+TE LV+ ALA RILDLGTGTGA+ LAL E P Sbjct: 81 LPLFVSPATLIPRPDTECLVEQALARL-----PTAPCRILDLGTGTGAIALALASERPDC 135 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181 + VD+ A+ +A NA G++ QSDWFS ++G F IVSNPPYI++ Sbjct: 136 EVTAVDVMPDAVALALRNAEHLGIA-NVTISQSDWFSELDGQRFATIVSNPPYIDAADPH 194 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P +L G GL+ I ++L G +E G+ Q V +F Sbjct: 195 LAEGDVR-FEPLTALVAGDQGLADLAHIIREGRQYLQPGGWMLLEHGWTQGEAVRALFRE 253 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 V +DYG N+R+ L Sbjct: 254 AGYLDVATCRDYGDNERLTLGR 275 >gi|262041833|ref|ZP_06015018.1| protein methyltransferase HemK [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259040825|gb|EEW41911.1| protein methyltransferase HemK [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 283 Score = 284 bits (728), Expect = 8e-75, Method: Composition-based stats. Identities = 90/262 (34%), Positives = 132/262 (50%), Gaps = 8/262 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 RD+ L VTG + ++ ++ L + L +VR + E I ++G R+F++ Sbjct: 21 PRRDAEILLGHVTGRARTWILAFGETTLSADEAARLEALLVRRHRGEPIAHLVGQREFWS 80 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +S T PRP+TE LV+ ALA RILDLGTGTGA+ LAL E P Sbjct: 81 LPLFVSPATLIPRPDTECLVEQALARL-----PTAPCRILDLGTGTGAIALALASERPDC 135 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181 + VD+ A+ +A NA G++ QSDWFS+++G F IVSNPPYI++ Sbjct: 136 EVTAVDVMPDAVALALRNAEHLGIA-NVTISQSDWFSALDGQRFATIVSNPPYIDAADPH 194 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P +L G GL+ I ++L G +E G+ Q V +F Sbjct: 195 LAEGDVR-FEPLTALVAGDQGLADLAHIIREGRQYLQPGGWMLLEHGWTQGEAVRALFRE 253 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 V +DYG N+R+ L Sbjct: 254 AGYLDVATCRDYGDNERLTLGR 275 >gi|238651092|ref|YP_002916950.1| bifunctional N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase/tRNA (m7G46) methyltransferase [Rickettsia peacockii str. Rustic] gi|238625190|gb|ACR47896.1| bifunctional N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase/tRNA (m7G46) methyltransferase [Rickettsia peacockii str. Rustic] Length = 524 Score = 284 bits (727), Expect = 9e-75, Method: Composition-based stats. Identities = 83/281 (29%), Positives = 135/281 (48%), Gaps = 21/281 (7%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 ++ L V ++++ D L++ + + R LKHE I I G ++FY+ Sbjct: 24 PQLEARILLQHVINKPIEYLLINLDEQLNEAKIEAFEKLLARRLKHEPIVYITGVKEFYS 83 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFS-----LPRIEKRDV---------------VRIL 102 ++ PR +TE+LVD P ++ D + IL Sbjct: 84 REFIVNKHVLIPRSDTEVLVDVVFQCHSRESGNPEKKQPDPCFRGNDISENCNDKFLNIL 143 Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162 +LGTG+G + ++LL E + DIS A++I KSNA V++R + S+WF ++E Sbjct: 144 ELGTGSGCIAISLLCELQNANVIATDISLDAIDIIKSNAAKYEVTDRIQIIHSNWFENIE 203 Query: 163 -GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221 FD IVSNPPYI + +E +++P I+L DGL Y IA+ + L +G Sbjct: 204 TQKFDFIVSNPPYIAHSEKSEMAIETINYEPSIALFAEKDGLQAYFLIAENAKQFLKPNG 263 Query: 222 LCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262 +EIG+ Q+ V +IF + + +KD G+ RV+L Sbjct: 264 KIILEIGFKQEEAVTQIFLDHGYNIESVYKDLQGHSRVILL 304 >gi|26247535|ref|NP_753575.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli CFT073] gi|91210433|ref|YP_540419.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli UTI89] gi|110641442|ref|YP_669172.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli 536] gi|117623430|ref|YP_852343.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli APEC O1] gi|191170952|ref|ZP_03032503.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli F11] gi|218558141|ref|YP_002391054.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli S88] gi|218689159|ref|YP_002397371.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli ED1a] gi|227886366|ref|ZP_04004171.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli 83972] gi|237705174|ref|ZP_04535655.1| methyltransferase HemK [Escherichia sp. 3_2_53FAA] gi|300971919|ref|ZP_07171707.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS 45-1] gi|300995965|ref|ZP_07181327.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS 200-1] gi|301046861|ref|ZP_07193978.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS 185-1] gi|331657263|ref|ZP_08358225.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli TA206] gi|26107936|gb|AAN80135.1|AE016759_409 Protein methyltransferase hemK [Escherichia coli CFT073] gi|91072007|gb|ABE06888.1| protein methyltransferase HemK [Escherichia coli UTI89] gi|110343034|gb|ABG69271.1| protein methyltransferase HemK [Escherichia coli 536] gi|115512554|gb|ABJ00629.1| protein methyltransferase HemK [Escherichia coli APEC O1] gi|190908684|gb|EDV68272.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli F11] gi|218364910|emb|CAR02606.1| N5-glutamine methyltransferase, modifies release factors RF-1 and RF-2 [Escherichia coli S88] gi|218426723|emb|CAR07560.1| N5-glutamine methyltransferase, modifies release factors RF-1 and RF-2 [Escherichia coli ED1a] gi|226899931|gb|EEH86190.1| methyltransferase HemK [Escherichia sp. 3_2_53FAA] gi|227836570|gb|EEJ47036.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli 83972] gi|294492037|gb|ADE90793.1| protein methyltransferase HemK [Escherichia coli IHE3034] gi|300301229|gb|EFJ57614.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS 185-1] gi|300304662|gb|EFJ59182.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS 200-1] gi|300411044|gb|EFJ94582.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS 45-1] gi|307553267|gb|ADN46042.1| protein methyltransferase HemK [Escherichia coli ABU 83972] gi|307627265|gb|ADN71569.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli UM146] gi|315288567|gb|EFU47965.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS 110-3] gi|315290790|gb|EFU50162.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS 153-1] gi|315297346|gb|EFU56626.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS 16-3] gi|323949671|gb|EGB45557.1| protein-(glutamine-N5) methyltransferase [Escherichia coli H252] gi|323953933|gb|EGB49732.1| protein-(glutamine-N5) methyltransferase [Escherichia coli H263] gi|324015638|gb|EGB84857.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS 60-1] gi|331055511|gb|EGI27520.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli TA206] Length = 277 Score = 284 bits (727), Expect = 9e-75, Method: Composition-based stats. Identities = 90/262 (34%), Positives = 125/262 (47%), Gaps = 8/262 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 RD+ L VTG ++ ++ L D Q L + R E I + G R+F++ Sbjct: 20 PRRDAEILLEHVTGRGRTFILAFGETQLTDEQCQQLDALLTRRRDGEPIAHLTGVREFWS 79 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +S T PRP+TE LV+ ALA RILDLGTGTGA+ LAL E P Sbjct: 80 LPLFVSPATLIPRPDTECLVEQALARL-----PEQPCRILDLGTGTGAIALALASERPDC 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181 + VD A+ +A+ NA + LQSDWFS++ G F +IVSNPPYI+ Sbjct: 135 EITAVDRMPDAVSLAQRNAQHLAIK-NIHILQSDWFSALAGQQFAMIVSNPPYIDEQDPH 193 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P +L G++ I + L G +E G+ Q V + F Sbjct: 194 LQQGDVR-FEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFIF 252 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 V +DYG N+RV L Sbjct: 253 AGYHDVETCRDYGDNERVTLGR 274 >gi|134301000|ref|YP_001114496.1| HemK family modification methylase [Desulfotomaculum reducens MI-1] gi|134053700|gb|ABO51671.1| [protein release factor]-glutamine N5-methyltransferase [Desulfotomaculum reducens MI-1] Length = 289 Score = 284 bits (727), Expect = 9e-75, Method: Composition-based stats. Identities = 72/264 (27%), Positives = 128/264 (48%), Gaps = 7/264 (2%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 D+ L +VTG+ + + + L +Q+ + R + E + ++G ++F Sbjct: 24 LDAQVLLSQVTGIDRTGLFMRQEQPLTPQQQEKYQILLERRAQGEPVAYLIGRKEFMGRD 83 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 ++ D PRP+TEL+V++A+ F V +D+GTG+GA+ ++L + Sbjct: 84 FVVTPDVLIPRPDTELMVETAVKFFHKNSSCPPVA--VDVGTGSGAIAVSLASLVQELQV 141 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF----DVIVSNPPYIESVIV 180 +D+S AL++A+ NA G+ ER Q + + +I +N PY+ S + Sbjct: 142 YAIDLSEAALKVARQNAERLGMKERVHFQQGNLLEPLLKTMGEEVSIITANLPYVPSGDI 201 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 L +V++F+P ++LDGG DGL YR + R L GL +EIG Q +I Sbjct: 202 PTLMRDVKEFEPHLALDGGPDGLDLYRLLIPQAYRLLQPGGLLLMEIGPGQGTGAKKILP 261 Query: 241 SRKLFLVNAFKDYGGNDRVLLFCR 264 + + KD G +R++L + Sbjct: 262 A-GQWQGTVLKDLAGRERLVLAEK 284 >gi|317473031|ref|ZP_07932331.1| protein-(glutamine-N5) methyltransferase [Anaerostipes sp. 3_2_56FAA] gi|316899460|gb|EFV21474.1| protein-(glutamine-N5) methyltransferase [Anaerostipes sp. 3_2_56FAA] Length = 291 Score = 284 bits (727), Expect = 9e-75, Method: Composition-based stats. Identities = 76/260 (29%), Positives = 125/260 (48%), Gaps = 10/260 (3%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDD-RQRFFLTNAIVRSL-KHESIHRILGWRDFYNV 63 ++ LS + + + +++ + + R + + + ++G +DF Sbjct: 38 EAWYLFSHCFSLSREEYLFSMTTPVEEGEELEQYKALLDRRISERIPLQYLIGTQDFMGY 97 Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 ++ D PR +TE ++++ + + P ILD+ TG+G + ++L Sbjct: 98 TFRVTPDVLIPRQDTESVIEAVVEGNYPHES------ILDVCTGSGCIAISLCLMLKPDV 151 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183 +G DI KAL+IAK N +F +SD FS V+G FD+I+SNPPYI + L Sbjct: 152 CIGTDIDEKALKIAKENGRRLAPMVKFK--KSDLFSGVDGCFDLIISNPPYIPTKDCMEL 209 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 EV+D +P ++LDG DGL YR +A +HLN G EIGY+Q V + E Sbjct: 210 MPEVKDHEPMLALDGREDGLYFYRKLAGTAPKHLNAGGTLVFEIGYDQGAAVKTMMEEAG 269 Query: 244 LFLVNAFKDYGGNDRVLLFC 263 V KD G DR+++ Sbjct: 270 FSSVEIKKDLAGLDRMVIGT 289 >gi|227328866|ref|ZP_03832890.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 281 Score = 284 bits (727), Expect = 1e-74, Method: Composition-based stats. Identities = 85/262 (32%), Positives = 136/262 (51%), Gaps = 8/262 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 RD+ L VTG + ++ ++ L+ ++ LT + R + E I ++G R+F++ Sbjct: 20 PKRDAEILLGFVTGKARTFLLAFGETELNAAEQQQLTELLARREQGEPIAYLIGVREFWS 79 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +S T PRP+TE LV+ AL + +LDLGTGTGA+ LAL E Sbjct: 80 LPLAVSPATLIPRPDTECLVEQALLRL-----PQTPCAVLDLGTGTGAIALALASERRDC 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181 + GVD+ A+ +A NA G+ + L W+S ++ F +I SNPPYI++ V Sbjct: 135 RVTGVDVQPDAVALATKNAQQLGL-DNASFLSGSWYSPLDHTRFALIASNPPYIDADDVH 193 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P +L +GL+ RTI + +L+ +E G+ Q V ++ ++ Sbjct: 194 LSQGDVR-FEPASALIAADNGLADLRTIIESAPHYLDDGAWLLLEHGWQQADMVRQLLQA 252 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 R + +DYGGNDRV L Sbjct: 253 RGFTQIETCQDYGGNDRVSLGR 274 >gi|260583302|ref|ZP_05851077.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Haemophilus influenzae NT127] gi|260093662|gb|EEW77575.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Haemophilus influenzae NT127] Length = 292 Score = 284 bits (727), Expect = 1e-74, Method: Composition-based stats. Identities = 98/270 (36%), Positives = 147/270 (54%), Gaps = 12/270 (4%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 + D+ L TG Q++ D+ +D++ R LT + R LK E I ILG ++F+ Sbjct: 22 NSKIDALVLLQHATGKLRTQILAFDDTEIDEKVRLKLTALLDRRLKGEPIAYILGEKEFW 81 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALLKESP 120 ++ L +S T PRP+TE+LV+ AL +L ++E+ RILDLGTGTGA+ LAL E Sbjct: 82 SLPLNVSKSTLIPRPDTEILVEKALQIALEKLEENPPHFRILDLGTGTGAIALALASELA 141 Query: 121 FF--------KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNP 172 + +GVD+ + +A+SNA N + LQS WF ++ G FD+IVSNP Sbjct: 142 PICQKRHIPLEIIGVDLMSDVVALAQSNAERNQL--NVQFLQSCWFDNITGKFDLIVSNP 199 Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232 PYI++ +VR F+P +L +G + R I + S +LN +G+ +E G+ Q Sbjct: 200 PYIDAQDEHLHQGDVR-FEPLSALVANGEGYADLRHIIELASSYLNSNGVLLLEHGWQQG 258 Query: 233 VDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262 V IF +V +DYG N+RV L Sbjct: 259 EKVRSIFLENYWEMVETVRDYGDNERVTLG 288 >gi|218783032|ref|YP_002434350.1| modification methylase, HemK family [Desulfatibacillum alkenivorans AK-01] gi|218764416|gb|ACL06882.1| modification methylase, HemK family [Desulfatibacillum alkenivorans AK-01] Length = 289 Score = 284 bits (727), Expect = 1e-74, Method: Composition-based stats. Identities = 86/268 (32%), Positives = 132/268 (49%), Gaps = 9/268 (3%) Query: 1 MQALR-DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRD 59 ++A R + L + D L+ + + R E + I+G RD Sbjct: 24 VEAPRLSAEILLSHCLDYPRIHLYTRHDQPLNPEELGRFRELVKRRAAREPVAYIVGNRD 83 Query: 60 FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119 F+ + L ++ PRPETE LV++AL + +R+LDLGTG+GA+ LAL E Sbjct: 84 FWTLELDVNPSVLIPRPETETLVETALEVLNA---AQAPMRVLDLGTGSGAIILALASEK 140 Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIES 177 P + VD S +ALE AK+NA + + D + WF +V FD++VSNPPYI S Sbjct: 141 PEHHYMAVDYSPQALETAKANAQKHNL--NVDFYKGSWFEAVRCLDRFDLVVSNPPYIPS 198 Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237 + L EV ++P +LDGG G+ H I + HL G +E+G++QK V + Sbjct: 199 RDIPGLMPEVARYEPMSALDGGPQGMDHLALIIERAPEHLKPGGWLMLEMGFDQKELVEQ 258 Query: 238 I-FESRKLFLVNAFKDYGGNDRVLLFCR 264 + E++ V +D G+ R + R Sbjct: 259 VALETQAYENVRFVRDLAGHFRTAVMQR 286 >gi|331646530|ref|ZP_08347633.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli M605] gi|281178398|dbj|BAI54728.1| putative methyltransferase [Escherichia coli SE15] gi|330911077|gb|EGH39587.1| methylase of polypeptide chain release factor [Escherichia coli AA86] gi|331045282|gb|EGI17409.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli M605] Length = 277 Score = 283 bits (726), Expect = 1e-74, Method: Composition-based stats. Identities = 90/262 (34%), Positives = 126/262 (48%), Gaps = 8/262 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 RD+ L VTG ++ ++ L D Q L + R E I + G R+F++ Sbjct: 20 PRRDAEILLEHVTGKGRTFILAFGETQLTDEQCQQLDALLTRRRDGEPIAHLTGVREFWS 79 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +S T PRP+TE LV+ ALA RILDLGTGTGA+ LAL E P Sbjct: 80 LPLFVSPATLIPRPDTECLVEQALARL-----PEQPCRILDLGTGTGAIALALASERPDC 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181 + + VD A+ +A+ NA + LQSDWFS++ G F +IVSNPPYI+ Sbjct: 135 EIIAVDRMPDAVALAQRNAQHLAIK-NIHILQSDWFSALAGQQFAMIVSNPPYIDEQDPH 193 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P +L G++ I + L G +E G+ Q V + F Sbjct: 194 LQQGDVR-FEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFIL 252 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 V +DYG N+RV L Sbjct: 253 AGYHDVETCRDYGDNERVTLGR 274 >gi|210623299|ref|ZP_03293716.1| hypothetical protein CLOHIR_01666 [Clostridium hiranonis DSM 13275] gi|210153700|gb|EEA84706.1| hypothetical protein CLOHIR_01666 [Clostridium hiranonis DSM 13275] Length = 293 Score = 283 bits (726), Expect = 1e-74, Method: Composition-based stats. Identities = 86/267 (32%), Positives = 141/267 (52%), Gaps = 5/267 (1%) Query: 3 ALRDSHSFLCRVTG-LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 D L +V G + + ++ + L + + I I+G R+F Sbjct: 26 PRLDIEVMLMKVLGDVDKLYLHMNLNKDLSQEKLDEIEKMAEERKSGRPIAYIVGNREFM 85 Query: 62 NVRLTLSSDTFEPRPETELLVDSALA-FSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120 + + PRP+TE LVD + +S +++D + ILD+GTG+GA+ ++L Sbjct: 86 GLDFYVQEGVLIPRPDTETLVDEIIRIYSEEEYKQKDRIDILDIGTGSGAITVSLAYYIK 145 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG---LFDVIVSNPPYIES 177 DIS ALEI NA TN V +R + ++SD FS++EG + D+IVSNPPYI Sbjct: 146 NSFVKSFDISDIALEIGAKNAATNSVEDRTEFIKSDVFSALEGEGEILDIIVSNPPYIRK 205 Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237 ++ L +V+D++P +L+GG DGL YR+I +G ++L K G+ + E+G++Q DV Sbjct: 206 DVIPTLHTQVKDYEPYNALEGGEDGLDFYRSITEGSVKYLKKGGILAYEVGHDQAEDVSN 265 Query: 238 IFESRKLFLVNAFKDYGGNDRVLLFCR 264 I ++ + KD G DRV++ + Sbjct: 266 IMKNCGYEKIYTKKDLPGIDRVVIGTK 292 >gi|170768219|ref|ZP_02902672.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia albertii TW07627] gi|170122985|gb|EDS91916.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia albertii TW07627] Length = 277 Score = 283 bits (726), Expect = 1e-74, Method: Composition-based stats. Identities = 94/262 (35%), Positives = 128/262 (48%), Gaps = 8/262 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 RD+ L VTG ++ ++ L D QR L + R E + + G R+F++ Sbjct: 20 PRRDAEILLEHVTGKGRTWILAFGETQLTDAQREQLDVLLARRRVGEPVAHLTGVREFWS 79 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 +RL +SS T PRP+TE LV+ ALA RILDLGTGTGA+ LAL E Sbjct: 80 LRLFVSSATLIPRPDTECLVEQALARL-----PEQPCRILDLGTGTGAIALALASERTDC 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181 VD A+E+AK NA + LQSDWFS++ G F +IVSNPPYI+ Sbjct: 135 DITAVDRMPDAVELAKRNARHLAIK-NIHILQSDWFSALVGQQFAMIVSNPPYIDEQDPH 193 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P +L G++ I + L G +E G+ Q V + F Sbjct: 194 LQQGDVR-FEPLSALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFIR 252 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 V +DYGGN+RV L Sbjct: 253 AGYCEVETCRDYGGNERVTLGR 274 >gi|239948111|ref|ZP_04699864.1| bifunctional methyltransferase [Rickettsia endosymbiont of Ixodes scapularis] gi|239922387|gb|EER22411.1| bifunctional methyltransferase [Rickettsia endosymbiont of Ixodes scapularis] Length = 420 Score = 283 bits (726), Expect = 1e-74, Method: Composition-based stats. Identities = 86/286 (30%), Positives = 137/286 (47%), Gaps = 26/286 (9%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 ++ L V ++++ D L++ + + R LKHE I I G ++FY+ Sbjct: 24 PQLEARILLRHVINKPIEYLLINLDEQLNEAEIEAFEKLLKRRLKHEPIAYITGVKEFYS 83 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIE-------------------------KRD 97 ++ PR +TE+LV L P + + Sbjct: 84 REFIVNKHVLIPRSDTEVLVRIVLGLLKPSLRATERSVAISGILPEIASSTPMASSRNDE 143 Query: 98 VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157 +IL+LGTG+G + ++LL E P + DIS A+EI KSNA V +R + SDW Sbjct: 144 YTKILELGTGSGCIAISLLCELPNANVIATDISLDAIEIIKSNAAKYEVMDRLQVIHSDW 203 Query: 158 FSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216 F ++ + FD+IVSNPPYI + +E +++P I+L DGL Y+TIA + Sbjct: 204 FENLGKQKFDLIVSNPPYISHSEKSEMAIETINYEPSIALFAEEDGLQCYKTIAGNAKQF 263 Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262 L +G +EIG+ Q+ V +IF + + N ++D G RV+LF Sbjct: 264 LKPNGKIILEIGFKQEEAVTQIFLDQSYNIENVYRDLQGYSRVILF 309 >gi|325263709|ref|ZP_08130442.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Clostridium sp. D5] gi|324030747|gb|EGB92029.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Clostridium sp. D5] Length = 306 Score = 283 bits (726), Expect = 1e-74, Method: Composition-based stats. Identities = 90/282 (31%), Positives = 132/282 (46%), Gaps = 25/282 (8%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 A D+ L V+G+ PD +L + Q T+ I R + + + G ++F Sbjct: 21 DARLDAWYLLEYVSGVGRAMYYAMPDKLLTEAQEKQYTDYIERRAQRIPLQHLTGTQEFM 80 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEK------------------RDVVRILD 103 + ++ PR +TE+LV+ AL + +E R R+LD Sbjct: 81 GLEFQVNEHVLIPRQDTEVLVEEALGAAEKYMEHMSCSFAGNRGAGDGCEDARKTFRLLD 140 Query: 104 LGTGTGAVCLALLKESP-----FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158 + TG+G + L++L KG+GVD+S KALE A++NA + D L SD F Sbjct: 141 MCTGSGCILLSMLHYISKNKQMQSKGLGVDVSEKALETARANADALHIDA--DFLHSDLF 198 Query: 159 SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218 VEG F +IVSNPPYI + +++ L EV+ DP ++LDG DGL YR I L Sbjct: 199 EQVEGSFQMIVSNPPYIRTDVIETLQEEVKGHDPVLALDGRADGLYFYRKIVREAKHCLV 258 Query: 219 KDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 G EIG +Q V + V+ KD G DRV+ Sbjct: 259 SGGSLLFEIGADQGEAVSAMMWEAGYSRVSVKKDLAGLDRVV 300 >gi|160878571|ref|YP_001557539.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Clostridium phytofermentans ISDg] gi|160427237|gb|ABX40800.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Clostridium phytofermentans ISDg] Length = 279 Score = 283 bits (725), Expect = 2e-74, Method: Composition-based stats. Identities = 89/259 (34%), Positives = 129/259 (49%), Gaps = 9/259 (3%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 A D+ L VTGL ++ + + + H + + G ++F Sbjct: 24 DAELDAWYLLEHVTGLRRIDYMIRAKEDMSIEVYERYQQLLKKRALHIPLQYLTGSQEFM 83 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 + ++ PR +TE LV+ L S + +L+L TG+G + ++L K Sbjct: 84 GLSFRVNESVLIPRQDTERLVEEVLKVSKDKD-------VLELCTGSGCIIISLAKLGNI 136 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181 V VDIS A+++AK NA N V L SD FS+V G +DVIVSNPPYIES +++ Sbjct: 137 KNAVAVDISSDAIKVAKENAKDNEVL--VTYLLSDMFSNVSGTYDVIVSNPPYIESEVIE 194 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 L EV+D +PRI+LDG DGL YR +A R LNK+G +EIG NQ + + Sbjct: 195 GLMPEVKDHEPRIALDGDADGLKFYRILAKESGRFLNKNGRLYLEIGCNQAAFIGELLSQ 254 Query: 242 RKLFLVNAFKDYGGNDRVL 260 + KDY G DRV+ Sbjct: 255 NGFAQIKVVKDYAGLDRVV 273 >gi|282850387|ref|ZP_06259766.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Veillonella parvula ATCC 17745] gi|282579880|gb|EFB85284.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Veillonella parvula ATCC 17745] Length = 289 Score = 283 bits (725), Expect = 2e-74, Method: Composition-based stats. Identities = 82/264 (31%), Positives = 129/264 (48%), Gaps = 9/264 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 D L V G + D L + + + K + I+G +DF Sbjct: 27 PRLDGEVLLSHVLGKDRIYLYTHYDQPLIQDELDAFRPLVQQRAKGHCVAAIIGEKDFMG 86 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + ++ PRP+TE L++ L K VRILD+ TG G + L+LL P Sbjct: 87 LTFKVNDKVLIPRPDTETLIEHVLG----TYPKDSNVRILDVCTGPGTILLSLLHYLPNA 142 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG---LFDVIVSNPPYIESVI 179 GVG+DIS AL +A+ N + +S+R ++SD F ++ G FD+IVSNPPYI + Sbjct: 143 SGVGLDISTDALPVARENGESFNLSDRVQFMESDMFHTLYGKKEKFDLIVSNPPYIRTGD 202 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 + L +V + +P I+L GG DGL YR +A +LN +G + E+G++Q +V + Sbjct: 203 LKMLSPDVLN-EPHIALFGGEDGLQFYRILAKECRNYLNANGRVAFEVGFDQAEEVGALL 261 Query: 240 ESRK-LFLVNAFKDYGGNDRVLLF 262 + + D GG++RV+ Sbjct: 262 QETGQYSNIQFIADLGGHNRVVTA 285 >gi|317499019|ref|ZP_07957300.1| (glutamine-N5) methyltransferase [Lachnospiraceae bacterium 5_1_63FAA] gi|316893669|gb|EFV15870.1| (glutamine-N5) methyltransferase [Lachnospiraceae bacterium 5_1_63FAA] Length = 283 Score = 283 bits (725), Expect = 2e-74, Method: Composition-based stats. Identities = 79/262 (30%), Positives = 130/262 (49%), Gaps = 6/262 (2%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQ-RFFLTNAIVRSLKHESIHRILGWRDF 60 A D+ +S + ++D++ I + +H + ILG ++F Sbjct: 21 NASGDAWYLFSECFHISMEDYLFGMTDEINDKEAEERYKELIQKRKEHVPLQYILGTQEF 80 Query: 61 YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120 ++ D PR +TE +++ L ++ ++ILDL TG+G + ++L Sbjct: 81 MGYTFKVTPDVLIPRADTETVLEEVLLKVPQTLKN---LKILDLCTGSGCIAISLALILK 137 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180 VG DIS KAL+IAK+N ++ +QSD F +V G +D+I+SNPPYI + Sbjct: 138 PEVCVGTDISEKALKIAKANGE--NLAPMVKFIQSDLFENVTGSYDLIISNPPYITTEEC 195 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 L EV+D++P ++LDG DGL Y+ I +LN G+ + EIGY+Q V + E Sbjct: 196 GKLMPEVKDYEPMLALDGKEDGLYFYKKIIKEAKNYLNPQGMLAFEIGYDQGEAVKNLME 255 Query: 241 SRKLFLVNAFKDYGGNDRVLLF 262 ++ V KD G DR++ Sbjct: 256 AQDFACVEIKKDLAGLDRLVFG 277 >gi|331662615|ref|ZP_08363538.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli TA143] gi|331061037|gb|EGI33001.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli TA143] Length = 277 Score = 283 bits (725), Expect = 2e-74, Method: Composition-based stats. Identities = 91/262 (34%), Positives = 126/262 (48%), Gaps = 8/262 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 RD+ L VTG ++ ++ L D Q L + R E I + G R+F++ Sbjct: 20 PRRDAEILLEHVTGRGRTFILAFGETQLTDEQCQQLDALLTRRRDGEPIAHLTGVREFWS 79 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +S T PRP+TE LV+ ALA RILDLGTGTGA+ LAL E P Sbjct: 80 LPLFVSPATLIPRPDTECLVEQALARL-----PEQPCRILDLGTGTGAIALALASERPDC 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181 + VD A+ +A+ NA N + LQSDWFS++ G F +IVSNPPYI+ Sbjct: 135 EITAVDRMPDAVSLAQRNAQ-NLAIKNIHILQSDWFSALAGQQFAMIVSNPPYIDEQDPH 193 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P +L G++ I + L G +E G+ Q V + F Sbjct: 194 LQQGDVR-FEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFIL 252 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 V +DYG N+RV L Sbjct: 253 AGYHDVETCRDYGDNERVTLGR 274 >gi|269102027|ref|ZP_06154724.1| Polypeptide chain release factor methylase [Photobacterium damselae subsp. damselae CIP 102761] gi|268161925|gb|EEZ40421.1| Polypeptide chain release factor methylase [Photobacterium damselae subsp. damselae CIP 102761] Length = 282 Score = 283 bits (725), Expect = 2e-74, Method: Composition-based stats. Identities = 84/263 (31%), Positives = 128/263 (48%), Gaps = 9/263 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 D+ LC ++ P+ LD+ Q ++ + R L E + I+G R+F++ Sbjct: 24 PQLDAAVLLCHALDKPRSYLLTWPEKELDESQFSLFSHCVSRRLAGEPVAYIIGVREFWS 83 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L ++ T PRP+TE LV+ AL ++LDLGTGTGA+ LA+ E P Sbjct: 84 LPLKVAPSTLIPRPDTERLVELALDKI-----PAQPCQVLDLGTGTGAIALAIASERPDI 138 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIESVIV 180 G+D+ +A ++A N T G L W+S + F VIVSNPPYI+ Sbjct: 139 TVTGIDLRQEAAQLATENGATLGF-NNVQFLAGSWYSPLAEIQQFAVIVSNPPYIDEQDP 197 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 +VR F+P+ +L +GL+ + IA+ +HL +G +E G+ Q + V I Sbjct: 198 HLDQGDVR-FEPKSALVAADNGLADIKIIAEQGRQHLQTNGWLLLEHGFEQGLAVREILT 256 Query: 241 SRKLFLVNAFKDYGGNDRVLLFC 263 V +DY G DRV L C Sbjct: 257 KLGYQAVVTEQDYAGLDRVTLGC 279 >gi|293414489|ref|ZP_06657138.1| methyltransferase [Escherichia coli B185] gi|291434547|gb|EFF07520.1| methyltransferase [Escherichia coli B185] Length = 277 Score = 283 bits (725), Expect = 2e-74, Method: Composition-based stats. Identities = 90/262 (34%), Positives = 126/262 (48%), Gaps = 8/262 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 RD+ L VTG ++ ++ L D Q L + R E I + G R+F++ Sbjct: 20 PRRDAEILLEHVTGKGRTFILAFGETQLTDEQCQQLDALLTRRRDGEPIAHLTGVREFWS 79 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +S T PRP+TE LV+ ALA RILDLGTGTGA+ LAL E P Sbjct: 80 LPLFVSPATLIPRPDTECLVEQALARL-----PEQPCRILDLGTGTGAIALALASERPDC 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181 + + VD A+ +A+ NA + LQSDWFS++ G F +IVSNPPYI+ Sbjct: 135 EIIAVDRMPDAVSLAQRNAQHLAIK-NIHILQSDWFSALAGQQFAMIVSNPPYIDEQDPH 193 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P +L G++ I + L G +E G+ Q V + F Sbjct: 194 LQQGDVR-FEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFIL 252 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 V +DYG N+RV L Sbjct: 253 AGYHDVETCRDYGDNERVTLGR 274 >gi|145298194|ref|YP_001141035.1| protein-glutamine N-methyltransferase HemK [Aeromonas salmonicida subsp. salmonicida A449] gi|142850966|gb|ABO89287.1| Protein-glutamine N-methyltransferase HemK [Aeromonas salmonicida subsp. salmonicida A449] Length = 289 Score = 283 bits (724), Expect = 2e-74, Method: Composition-based stats. Identities = 88/270 (32%), Positives = 127/270 (47%), Gaps = 12/270 (4%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 D+ LC + ++ P+ LD Q+ L + R L E I ++G R+F++ Sbjct: 20 PRADADVLLCHLLDCRRSYLMTWPERELDAAQQDRLQGWLTRRLAGEPIAHLVGEREFWS 79 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD--VVRILDLGTGTGAVCLALLKESP 120 + L +S T PRP+TE+LV+ ALA P+ D +LDLGTGTGA+ LAL E P Sbjct: 80 LPLKVSPATLIPRPDTEVLVEQALARLPPKPASPDQAPCALLDLGTGTGAIALALKSERP 139 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-------LFDVIVSNPP 173 VD +A +A+ N+ G+ WF + F +IVSNPP Sbjct: 140 DADVWAVDRMPEAAALARDNSAALGLP--ITVRDGSWFEPLCDPLLSQAPRFAMIVSNPP 197 Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233 YI+ +VR F+PR +L GL+ R I G HL G +E G+ Q Sbjct: 198 YIDGADPHLNKGDVR-FEPRSALVADEQGLADIRLIVAGAPAHLCPGGWLLLEHGWQQGE 256 Query: 234 DVVRIFESRKLFLVNAFKDYGGNDRVLLFC 263 V ++ + V +DYG N+RV L C Sbjct: 257 AVRQLLLQQGFSRVETVRDYGDNERVTLGC 286 >gi|145637545|ref|ZP_01793202.1| HemK [Haemophilus influenzae PittHH] gi|145269231|gb|EDK09177.1| HemK [Haemophilus influenzae PittHH] Length = 292 Score = 283 bits (724), Expect = 2e-74, Method: Composition-based stats. Identities = 98/270 (36%), Positives = 143/270 (52%), Gaps = 12/270 (4%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 + D L VTG S Q++ D+ +D++ R LT + R LK E I ILG ++F+ Sbjct: 22 NSKIDVLVLLQHVTGKSRTQILAFDDTEIDEKVRLKLTALLDRRLKGEPIAYILGEKEFW 81 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV-RILDLGTGTGAVCLALLKESP 120 ++ L +S T PRP+TE LV+ AL +L ++E+ ILDLGTGTGA+ LAL E Sbjct: 82 SLPLNVSKSTLIPRPDTESLVEKALQIALEKLEENPPHFHILDLGTGTGAIALALASELA 141 Query: 121 FF--------KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNP 172 + +GVD+ + +A+SNA N + LQS WF ++ G FD+IVSNP Sbjct: 142 PICQKRHIPLEIIGVDLMPDVVALAQSNAERNQL--NVQFLQSSWFDNITGKFDLIVSNP 199 Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232 PYI++ +V F+P +L G + R I + S +LN +G+ +E G+ Q Sbjct: 200 PYIDAQDEHLHQGDV-SFEPLSALVANDAGYADLRHIIELASSYLNSNGVLLLEHGWQQG 258 Query: 233 VDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262 V IF +V DYG N+RV L Sbjct: 259 EKVRSIFLENYWEMVETVCDYGDNERVTLG 288 >gi|323704814|ref|ZP_08116391.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Thermoanaerobacterium xylanolyticum LX-11] gi|323535740|gb|EGB25514.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Thermoanaerobacterium xylanolyticum LX-11] Length = 279 Score = 283 bits (724), Expect = 2e-74, Method: Composition-based stats. Identities = 92/263 (34%), Positives = 137/263 (52%), Gaps = 10/263 (3%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 + ++ L + G+ +IV+ D L + + I+G + F Sbjct: 20 EPRLEAEGLLSFLLGVGREYIIVNRDKELSENIFERYKGLLDLRKDGMPYQYIVGKKHFM 79 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 + +S + PR +TE+LV+ L R++K DV +LD+GTG+GA+ +++ K Sbjct: 80 GLIFKVSPNVLIPRNDTEVLVEEVLK----RLQKNDV--VLDIGTGSGAIAVSIAK-YKD 132 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVI 179 K VDIS AL +A+ NA NGV ++ L+SD FSSV FDVIVSNPPYI S Sbjct: 133 VKVYAVDISDDALSVARDNAYENGVLDKIVFLKSDLFSSVPKDVKFDVIVSNPPYIRSGD 192 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 +D L EV+ +P+I+LDGG DGL YR I ++ G+ + E+GY++ DV RI Sbjct: 193 IDKLQEEVKK-EPKIALDGGEDGLLFYRKIVRDSKEYIKSSGIIAFEVGYDEAGDVSRIL 251 Query: 240 ESRKLFLVNAFKDYGGNDRVLLF 262 + KD G DRV+L Sbjct: 252 LDGGYGNIEIVKDLQGIDRVVLG 274 >gi|320181781|gb|EFW56691.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Shigella boydii ATCC 9905] Length = 277 Score = 283 bits (724), Expect = 2e-74, Method: Composition-based stats. Identities = 89/262 (33%), Positives = 124/262 (47%), Gaps = 8/262 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 RD+ L VTG V+ ++ L D Q L + R E + + G R+F++ Sbjct: 20 PRRDAEILLEYVTGRGRTFVLAFGETQLTDEQLQQLDALLARRRTGEPVAHLTGQREFWS 79 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +S T PRP+TE LV+ AL RILDLGTGTGA+ LAL E P Sbjct: 80 LPLFVSPATLIPRPDTECLVEQALERL-----PEQPCRILDLGTGTGAIALALASERPDC 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181 + VD A+ +A+ NA + LQSDWFS++ G F +IVSNPPYI+ Sbjct: 135 EITAVDRMPDAVALAQRNAQHLAIK-NIHILQSDWFSALAGQQFAMIVSNPPYIDEQDPH 193 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P +L G++ I + L G +E G+ Q V + F Sbjct: 194 LQQGDVR-FEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFIL 252 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 V +DYG N+RV L Sbjct: 253 AGYHDVETCRDYGDNERVTLGR 274 >gi|15801441|ref|NP_287458.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli O157:H7 EDL933] gi|15830971|ref|NP_309744.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli O157:H7 str. Sakai] gi|168750772|ref|ZP_02775794.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli O157:H7 str. EC4113] gi|168758137|ref|ZP_02783144.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli O157:H7 str. EC4401] gi|168764381|ref|ZP_02789388.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli O157:H7 str. EC4501] gi|168771101|ref|ZP_02796108.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli O157:H7 str. EC4486] gi|168776895|ref|ZP_02801902.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli O157:H7 str. EC4196] gi|168782568|ref|ZP_02807575.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli O157:H7 str. EC4076] gi|168787716|ref|ZP_02812723.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli O157:H7 str. EC869] gi|168801525|ref|ZP_02826532.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli O157:H7 str. EC508] gi|195939100|ref|ZP_03084482.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli O157:H7 str. EC4024] gi|208806533|ref|ZP_03248870.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli O157:H7 str. EC4206] gi|208815524|ref|ZP_03256703.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli O157:H7 str. EC4045] gi|208822687|ref|ZP_03263006.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli O157:H7 str. EC4042] gi|209396125|ref|YP_002270146.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli O157:H7 str. EC4115] gi|217328046|ref|ZP_03444128.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli O157:H7 str. TW14588] gi|254792682|ref|YP_003077519.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli O157:H7 str. TW14359] gi|261224944|ref|ZP_05939225.1| release factors RF-1 and RF-2 N5-glutamine methyltransferase [Escherichia coli O157:H7 str. FRIK2000] gi|261257199|ref|ZP_05949732.1| release factors RF-1 and RF-2 N5-glutamine methyltransferase [Escherichia coli O157:H7 str. FRIK966] gi|291282237|ref|YP_003499055.1| Protein-(Glutamine-N5) methyltransferase, release factor-specific [Escherichia coli O55:H7 str. CB9615] gi|12514925|gb|AAG56070.1|AE005338_10 possible protoporphyrinogen oxidase [Escherichia coli O157:H7 str. EDL933] gi|13361182|dbj|BAB35140.1| possible protoporphyrinogen oxidase [Escherichia coli O157:H7 str. Sakai] gi|187767812|gb|EDU31656.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli O157:H7 str. EC4196] gi|188015064|gb|EDU53186.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli O157:H7 str. EC4113] gi|189000050|gb|EDU69036.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli O157:H7 str. EC4076] gi|189354975|gb|EDU73394.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli O157:H7 str. EC4401] gi|189360088|gb|EDU78507.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli O157:H7 str. EC4486] gi|189365629|gb|EDU84045.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli O157:H7 str. EC4501] gi|189372472|gb|EDU90888.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli O157:H7 str. EC869] gi|189376321|gb|EDU94737.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli O157:H7 str. EC508] gi|208726334|gb|EDZ75935.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli O157:H7 str. EC4206] gi|208732172|gb|EDZ80860.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli O157:H7 str. EC4045] gi|208738172|gb|EDZ85855.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli O157:H7 str. EC4042] gi|209157525|gb|ACI34958.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli O157:H7 str. EC4115] gi|209772518|gb|ACI84571.1| possible protoporphyrinogen oxidase [Escherichia coli] gi|209772520|gb|ACI84572.1| possible protoporphyrinogen oxidase [Escherichia coli] gi|209772522|gb|ACI84573.1| possible protoporphyrinogen oxidase [Escherichia coli] gi|209772524|gb|ACI84574.1| possible protoporphyrinogen oxidase [Escherichia coli] gi|209772526|gb|ACI84575.1| possible protoporphyrinogen oxidase [Escherichia coli] gi|217318473|gb|EEC26899.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli O157:H7 str. TW14588] gi|254592082|gb|ACT71443.1| release factors RF-1 and RF-2 N5-glutamine methyltransferase [Escherichia coli O157:H7 str. TW14359] gi|290762110|gb|ADD56071.1| Protein-(Glutamine-N5) methyltransferase, release factor-specific [Escherichia coli O55:H7 str. CB9615] gi|320188004|gb|EFW62671.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli O157:H7 str. EC1212] gi|320643226|gb|EFX12427.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli O157:H- str. 493-89] gi|320648163|gb|EFX16839.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli O157:H- str. H 2687] gi|320653997|gb|EFX22071.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320659476|gb|EFX27045.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli O55:H7 str. USDA 5905] gi|320664613|gb|EFX31764.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli O157:H7 str. LSU-61] gi|326342760|gb|EGD66530.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli O157:H7 str. 1044] gi|326346387|gb|EGD70124.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli O157:H7 str. 1125] Length = 277 Score = 283 bits (724), Expect = 2e-74, Method: Composition-based stats. Identities = 90/262 (34%), Positives = 126/262 (48%), Gaps = 8/262 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 RD+ L VTG ++ ++ L D Q L + R E I + G R+F++ Sbjct: 20 PRRDAEILLEHVTGRGRTFILAFGETQLTDEQCQQLDALLTRRRDGEPIAHLTGVREFWS 79 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +S T PRP+TE LV+ ALA RILDLGTGTGA+ LAL +E P Sbjct: 80 LPLFVSPATLIPRPDTECLVEQALARL-----PEQPCRILDLGTGTGAIALALARERPDC 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181 + VD A+ +A+ NA + LQSDWFS++ G F +IVSNPPYI+ Sbjct: 135 EITAVDRMPDAVALAQRNAQHLAIK-NIHILQSDWFSALAGQQFAMIVSNPPYIDEQDPH 193 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P +L G++ I + L G +E G+ Q V + F Sbjct: 194 LQQGDVR-FEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFIL 252 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 V +DYG N+RV L Sbjct: 253 AGYHDVETCRDYGDNERVTLGR 274 >gi|167745422|ref|ZP_02417549.1| hypothetical protein ANACAC_00113 [Anaerostipes caccae DSM 14662] gi|167655143|gb|EDR99272.1| hypothetical protein ANACAC_00113 [Anaerostipes caccae DSM 14662] Length = 278 Score = 283 bits (724), Expect = 2e-74, Method: Composition-based stats. Identities = 76/260 (29%), Positives = 125/260 (48%), Gaps = 10/260 (3%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDD-RQRFFLTNAIVRSL-KHESIHRILGWRDFYNV 63 ++ LS + + + +++ + + R + + + ++G +DF Sbjct: 25 EAWYLFSHCFSLSREEYLFSMTTPVEEGEELEQYKALLDRRISERIPLQYLIGTQDFMGY 84 Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 ++ D PR +TE ++++ + + P ILD+ TG+G + ++L Sbjct: 85 TFRVTPDVLIPRQDTESVIEAVVEGNYPHES------ILDVCTGSGCIAISLCLMLKPDV 138 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183 +G DI KAL+IAK N +F +SD FS V+G FD+I+SNPPYI + L Sbjct: 139 CIGTDIDEKALKIAKENGRRLAPMVKFK--KSDLFSGVDGCFDLIISNPPYIPTKDCMEL 196 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 EV+D +P ++LDG DGL YR +A +HLN G EIGY+Q V + E Sbjct: 197 MPEVKDHEPMLALDGREDGLYFYRKLAGTAPKHLNAGGTLVFEIGYDQGAAVKTMMEEAG 256 Query: 244 LFLVNAFKDYGGNDRVLLFC 263 V KD G DR+++ Sbjct: 257 FSSVEIKKDLAGLDRMVIGT 276 >gi|260598214|ref|YP_003210785.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Cronobacter turicensis z3032] gi|260217391|emb|CBA31447.1| Protein methyltransferase hemK [Cronobacter turicensis z3032] Length = 280 Score = 283 bits (724), Expect = 2e-74, Method: Composition-based stats. Identities = 90/261 (34%), Positives = 137/261 (52%), Gaps = 8/261 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 RD+ L VTG + ++ ++ L D + L + R E + ++G R+F++ Sbjct: 20 PRRDAEILLGFVTGRTRTFILAFGETALTDDELARLETLLARRAAGEPVAYLIGQREFWS 79 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +S+ T PRP+TE LV+ ALA RILDLGTGTGA+ LA+ E P Sbjct: 80 LPLEVSTATLIPRPDTECLVEQALARL-----PATACRILDLGTGTGAIALAIASERPDC 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVD 181 +D+ +A+E+AK NA G+ + LQS WFS++ + F +IVSNPPYI+ Sbjct: 135 HVTALDVIPEAVELAKRNAQRLGI-DNVTVLQSHWFSALTDVRFSLIVSNPPYIDGDDPH 193 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P+ +L GL+ +T+ G L +G +E G+ Q V +FE Sbjct: 194 LTQGDVR-FEPKSALVAENAGLADLKTLIVGARHFLEDNGGLLLEHGWQQGGAVRELFER 252 Query: 242 RKLFLVNAFKDYGGNDRVLLF 262 V +DYGGN+R+ L Sbjct: 253 AGYQGVETCRDYGGNERLTLG 273 >gi|306813890|ref|ZP_07448063.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli NC101] gi|222033011|emb|CAP75751.1| Protein methyltransferase hemK [Escherichia coli LF82] gi|305852527|gb|EFM52975.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli NC101] gi|312945842|gb|ADR26669.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli O83:H1 str. NRG 857C] gi|320195778|gb|EFW70403.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli WV_060327] gi|324005999|gb|EGB75218.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS 57-2] Length = 277 Score = 283 bits (724), Expect = 2e-74, Method: Composition-based stats. Identities = 90/262 (34%), Positives = 125/262 (47%), Gaps = 8/262 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 RD+ L VTG ++ ++ L D Q L + R E I + G R+F++ Sbjct: 20 PRRDAEILLEHVTGRGRTFILAFGETQLTDEQCQQLDALLTRRRDGEPIAHLTGVREFWS 79 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +S T PRP+TE LV+ ALA RILDLGTGTGA+ LAL E P Sbjct: 80 LPLFVSPATLIPRPDTECLVEQALARL-----PEQPCRILDLGTGTGAIALALASERPDC 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181 + VD A+ +A+ NA + LQSDWFS++ G F +IVSNPPYI+ Sbjct: 135 EITAVDRMPDAVSLAQRNAQHLAIK-NIHILQSDWFSALAGQQFAMIVSNPPYIDEQDPH 193 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P +L G++ I + L G +E G+ Q V + F Sbjct: 194 LQQGDVR-FEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFIL 252 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 V +DYG N+RV L Sbjct: 253 AGYHDVETCRDYGDNERVTLGR 274 >gi|261209905|ref|ZP_05924206.1| Polypeptide chain release factor methylase [Vibrio sp. RC341] gi|260841091|gb|EEX67616.1| Polypeptide chain release factor methylase [Vibrio sp. RC341] Length = 286 Score = 283 bits (724), Expect = 2e-74, Method: Composition-based stats. Identities = 88/263 (33%), Positives = 124/263 (47%), Gaps = 9/263 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 D+ LC V ++ PD L++ L + R + E I ILG R+F++ Sbjct: 24 PALDAAVLLCHVLAKPRSYLLTWPDKTLEEPALASLDALLARRMAGEPIAYILGEREFWS 83 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +S T PRP+TE LV+ AL + +LDLGTGTGA+ LAL E P Sbjct: 84 LPLKVSPSTLIPRPDTERLVELALDKAALV-----DGELLDLGTGTGAIALALASELPQR 138 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIV 180 + G+D+ +A +A+ NA + LQ WFS + F +IVSNPPYIE Sbjct: 139 RVTGIDLRPEAAALAQENATRLAI-HNTQFLQGSWFSPLADGTKFALIVSNPPYIEENDP 197 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 +VR F+P+ +L +GL+ R I+ L G E GY+Q V + Sbjct: 198 HLSQGDVR-FEPQSALVAKENGLADIRYISTHAPHFLLDGGWLLFEHGYDQGAAVQMMLR 256 Query: 241 SRKLFLVNAFKDYGGNDRVLLFC 263 V +DY GNDRV L Sbjct: 257 ELGYQNVTTEQDYAGNDRVTLGQ 279 >gi|329296265|ref|ZP_08253601.1| release factor-specific protein-(glutamine-N5) methyltransferase [Plautia stali symbiont] Length = 276 Score = 282 bits (723), Expect = 3e-74, Method: Composition-based stats. Identities = 89/262 (33%), Positives = 127/262 (48%), Gaps = 8/262 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 RD+ L VTG S +I DS L+D Q L + R ++ E I ++G R+F++ Sbjct: 20 PKRDAEILLGFVTGKSRSGLIAFDDSPLNDAQLAQLETLLARRVRGEPIAHLVGEREFWS 79 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +S T PRP+TE+LV+ AL +LDLGTGTGA+ LAL E P Sbjct: 80 LPLRVSDATLIPRPDTEVLVEQALLRL-----PATPSAVLDLGTGTGAIALALASERPDC 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVD 181 + G D A+ +A+ NA ++ + S WF + FD+IVSNPPYI++ Sbjct: 135 QITGCDRIAAAVALAQDNAQRLHLT-NAGFVLSHWFDDLPAQRFDLIVSNPPYIDAADEH 193 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P +L GL+ R I + L G +E G+ Q V + Sbjct: 194 LQQGDVR-FEPLSALVAEEAGLADLRLIIERAPHWLQPQGWLLLEHGWQQGEAVRTLLTR 252 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 V +DYGGN RV L Sbjct: 253 NGFLAVTTVEDYGGNPRVTLGQ 274 >gi|260779384|ref|ZP_05888276.1| Polypeptide chain release factor methylase [Vibrio coralliilyticus ATCC BAA-450] gi|260605548|gb|EEX31843.1| Polypeptide chain release factor methylase [Vibrio coralliilyticus ATCC BAA-450] Length = 289 Score = 282 bits (723), Expect = 3e-74, Method: Composition-based stats. Identities = 87/261 (33%), Positives = 127/261 (48%), Gaps = 9/261 (3%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 D+ LC ++ PD +LD + R + E + I G R+F+++ Sbjct: 28 LDAAVLLCHTLNKPRSFLLTWPDKILDSEAILAFEANLQRRINGEPVAYITGEREFWSLP 87 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L ++ T PRP+TE LV+ AL ++ + ILDLGTGTGA+ LA+ E P + Sbjct: 88 LKVAPSTLIPRPDTERLVEIALEKAVE-----NQGDILDLGTGTGAIALAIASELPNRQV 142 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVDC 182 GVD+ +A ++A+SNA G+ L WF V F +IVSNPPYIE Sbjct: 143 WGVDLKQEAKQLAESNAEHLGIRNT-QFLSGSWFEPVGTGTKFALIVSNPPYIEEHDPHL 201 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 +VR F+P +L +GL+ + I+ L DG E GY+Q + V I S Sbjct: 202 AQGDVR-FEPLSALVAKDNGLADIKHISSQALSFLQCDGWLMFEHGYDQGMAVREILGSL 260 Query: 243 KLFLVNAFKDYGGNDRVLLFC 263 + +KDYG NDRV + Sbjct: 261 GYQNITTYKDYGENDRVTIGQ 281 >gi|297539751|ref|YP_003675520.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Methylotenera sp. 301] gi|297259098|gb|ADI30943.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Methylotenera sp. 301] Length = 320 Score = 282 bits (723), Expect = 3e-74, Method: Composition-based stats. Identities = 92/290 (31%), Positives = 130/290 (44%), Gaps = 31/290 (10%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 +A ++ L V ++ +I + L + R L E + ILG R+FY Sbjct: 22 EAKLEAQLLLQHVLNVNRAWLIAHANDALQPNIHAAFEAQLKRRLAGEPMAYILGNREFY 81 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSL----------------------------PRI 93 + L ++ DT PRP+TE LV++ALA Sbjct: 82 GLDLLVTPDTLIPRPDTETLVEAALAKIPLSESTKNLSFRRKSESSGVEQHDYETLDSDF 141 Query: 94 EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153 + D +++LDLGTGTGA+ LA+ K P VD S ALEIAK N+ + + Sbjct: 142 RRNDDLKVLDLGTGTGAIALAIAKNRPKASITAVDASDAALEIAKQNSQQLSI-INVEFT 200 Query: 154 QSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212 S+WF ++ FDVIVSNPPYIE ++R F+P +L G+DGL R I Sbjct: 201 LSNWFENLSNQRFDVIVSNPPYIEEHDAHLTQGDLR-FEPLSALASGMDGLDDIRQIIGD 259 Query: 213 VSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262 +L G +E GYNQ V + L + KD G NDRV + Sbjct: 260 CLIYLKPQGWLMLEHGYNQAEQVADLMADAGLTNIETIKDLGNNDRVTIG 309 >gi|54309993|ref|YP_131013.1| putative HemK protein, methylase of polypeptide chain release factors [Photobacterium profundum SS9] gi|46914432|emb|CAG21211.1| putative HemK protein, Methylase of polypeptide chain release factors [Photobacterium profundum SS9] Length = 282 Score = 282 bits (723), Expect = 3e-74, Method: Composition-based stats. Identities = 83/261 (31%), Positives = 128/261 (49%), Gaps = 9/261 (3%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 D+ LC V ++ P+ D Q + R + E + ILG R+F+++ Sbjct: 26 LDAAVLLCHVLDKPRSYLLTWPEKAPSDEQFTLFEALLARRITGEPVAYILGEREFWSLP 85 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L +S T PRP+TE LV+ AL +LDLGTGTGA+ LA+ E + Sbjct: 86 LKVSPFTLIPRPDTERLVELALEKI-----PTQACTVLDLGTGTGAIALAIASERNDAQV 140 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVDC 182 G+D+ +A E+A N + L W++ + + LF VIVSNPPYI++ Sbjct: 141 TGIDLRPEAAELAAENGQRLNIQ-NVRFLAGSWYTPLASDELFSVIVSNPPYIDAADPHL 199 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 + +VR F+P+ +L +GL+ + I++ +HL G +E G+ Q V I + Sbjct: 200 VLGDVR-FEPKTALVADDNGLADIQIISEQGRQHLQTGGWLLMEHGFEQGEAVRHILQEL 258 Query: 243 KLFLVNAFKDYGGNDRVLLFC 263 LV+ +DY G DRV L C Sbjct: 259 GYHLVSTAQDYAGLDRVTLGC 279 >gi|220932632|ref|YP_002509540.1| modification methylase, HemK family [Halothermothrix orenii H 168] gi|219993942|gb|ACL70545.1| modification methylase, HemK family [Halothermothrix orenii H 168] Length = 285 Score = 282 bits (723), Expect = 3e-74, Method: Composition-based stats. Identities = 73/267 (27%), Positives = 134/267 (50%), Gaps = 7/267 (2%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 D+ L + + Q+ V D L +++ ++ + + + G ++F Sbjct: 21 NPRLDAEVLLAHLLDMERIQLYVKYDLPLKNKEVEAYREMVINRARGIPVAYLTGHKEFM 80 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 ++ ++ PRPETE+LV+ + SL + + D I+D+GTG+G + ++L P Sbjct: 81 SLDFKVNRSVLIPRPETEILVEEII--SLCQAKNIDNPNIVDVGTGSGVIAVSLAHYLPG 138 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV----EGLFDVIVSNPPYIES 177 + +G+DIS KALE+A++N + + ER ++ + + + +++VSNPPY+ Sbjct: 139 ARVLGIDISDKALEVARTNIKRHNLGERVKVIKGNLLDPLIKMEKDNVNIVVSNPPYLTG 198 Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237 + L LEV ++P +LDGG DGL YR + + L G+ +EIGY+Q + Sbjct: 199 NEMKKLPLEV-TYEPSQALDGGADGLKIYRELIPRALKVLVPGGILGLEIGYHQADSIRD 257 Query: 238 IFESRKLFLVNAFKDYGGNDRVLLFCR 264 I + +DY G DRV++ + Sbjct: 258 ILSGLPWGDIRVLQDYSGLDRVVIARK 284 >gi|153809901|ref|ZP_01962569.1| hypothetical protein RUMOBE_00282 [Ruminococcus obeum ATCC 29174] gi|149834079|gb|EDM89159.1| hypothetical protein RUMOBE_00282 [Ruminococcus obeum ATCC 29174] Length = 300 Score = 282 bits (723), Expect = 3e-74, Method: Composition-based stats. Identities = 81/272 (29%), Positives = 126/272 (46%), Gaps = 13/272 (4%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 +A D+ L ++ D LD + + +H + I G F Sbjct: 26 EARLDAWLLLEYTADITRAWYYAHMDDGLDAKTEERYRTLCTKRAQHIPLQHITGRAYFM 85 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 + PR +TE+LV+ A+ R+ + +ILD+ TG+G + L+LL E P Sbjct: 86 GYEFCVDERVLVPRQDTEVLVEEAI----SRMRNLEKPQILDMCTGSGCILLSLLLELPQ 141 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL---------FDVIVSNP 172 G GVD+S AL +AK N G+ +R + +QSD FS+ +D+++SNP Sbjct: 142 ALGTGVDVSEGALCVAKENRKRLGLEQRAELIQSDLFSADYFRKNSGNDHMEYDMLISNP 201 Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232 PYI + ++ L EVR DP ++LDG +GL Y I + +L G EIG +Q Sbjct: 202 PYIRTEDIEGLMEEVRFHDPVLALDGKENGLYFYEKITEQAGTYLKPGGWLMYEIGCDQG 261 Query: 233 VDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 +DV I + + KD G DRV+ + Sbjct: 262 MDVSEIMKKNGFEQIEIKKDLAGLDRVVTGRK 293 >gi|88704042|ref|ZP_01101757.1| protoporphyrinogen oxidase [Congregibacter litoralis KT71] gi|88701869|gb|EAQ98973.1| protoporphyrinogen oxidase [Congregibacter litoralis KT71] Length = 280 Score = 282 bits (723), Expect = 3e-74, Method: Composition-based stats. Identities = 85/259 (32%), Positives = 133/259 (51%), Gaps = 8/259 (3%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 +A R++ LC ++ PD+ ++ + + + + +LG R+F+ Sbjct: 18 EAQREAQVLLCAALKKPRSYLVAWPDAEVEASAAEHYRHLLAQRASGIPVAYLLGEREFW 77 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 ++ L ++ T PRP+TELLV+ AL L +LDLGTG+GA+ LAL E P Sbjct: 78 SLTLRVNDATLIPRPDTELLVEQALKLDLS-----PGASVLDLGTGSGAIALALASERPR 132 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIV 180 ++ GV+ S +ALEIA++N G+ + +SDWF++V G FD+IVSNPPYI Sbjct: 133 WQITGVEHSPEALEIARTNGKRLGLKD-VAFHRSDWFTAVRGQRFDLIVSNPPYIAESDG 191 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 ++R F+PR +L G DGL R I L G +E G+ Q V + Sbjct: 192 HLSSGDLR-FEPRSALVSGADGLDDIRHIIAEAPTWLEPRGRLLLEHGFEQGSTVRALLS 250 Query: 241 SRKLFLVNAFKDYGGNDRV 259 +R V + +D G++RV Sbjct: 251 TRGFTAVASAEDLAGHERV 269 >gi|54298227|ref|YP_124596.1| hypothetical protein lpp2285 [Legionella pneumophila str. Paris] gi|53752012|emb|CAH13438.1| hypothetical protein lpp2285 [Legionella pneumophila str. Paris] Length = 287 Score = 282 bits (722), Expect = 3e-74, Method: Composition-based stats. Identities = 84/264 (31%), Positives = 131/264 (49%), Gaps = 7/264 (2%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 + ++ LC V + + PD+++ Q I + + I I G R+F+ Sbjct: 21 ETKLEAELLLCHVLNKNRAYLFAHPDALVSPEQIETYLQMIKQRAEGLPIAYITGQREFW 80 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 ++ L ++ + PR ETE LV+ AL I ++ V +LDLGTG+GA+ LAL KE P Sbjct: 81 SLSLKVTPNVLIPRHETERLVELALEL----IPDKENVSVLDLGTGSGAIALALAKERPL 136 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIV 180 + D S +ALE+A+ NA T G+ + S WF+++ + IVSNPPYI Sbjct: 137 WHIDACDFSKEALELARYNAKTLGL-NNINFYHSCWFNNLPLKQYHAIVSNPPYIAENDP 195 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 +VR F+P +L DGL+ + I +L DGL VE G+ QK ++ I Sbjct: 196 HLKQGDVR-FEPTSALVSSQDGLADLQYIIQHSYEYLLPDGLLLVEHGFEQKNEISAILN 254 Query: 241 SRKLFLVNAFKDYGGNDRVLLFCR 264 ++ ++D G+DRV R Sbjct: 255 QLGYKNIHCWQDLQGHDRVSGGQR 278 >gi|194434244|ref|ZP_03066510.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Shigella dysenteriae 1012] gi|194417475|gb|EDX33578.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Shigella dysenteriae 1012] gi|332092252|gb|EGI97329.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Shigella boydii 5216-82] gi|332098227|gb|EGJ03200.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Shigella dysenteriae 155-74] Length = 277 Score = 282 bits (722), Expect = 3e-74, Method: Composition-based stats. Identities = 89/262 (33%), Positives = 124/262 (47%), Gaps = 8/262 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 RD+ L VTG V+ ++ L D Q L + R E + + G R+F++ Sbjct: 20 PRRDAEILLEYVTGRGRTFVLAFGETQLTDEQLQQLDALLARRRTGEPVAHLTGQREFWS 79 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +S T PRP+TE LV+ AL RILDLGTGTGA+ LAL E P Sbjct: 80 LPLFVSPATLIPRPDTECLVEQALERL-----PEQPCRILDLGTGTGAIALALASERPDC 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181 + VD A+ +A+ NA + LQSDWFS++ G F +IVSNPPYI+ Sbjct: 135 EITAVDRMPDAVALAQRNAQHLAIK-NIHILQSDWFSALAGQQFAMIVSNPPYIDEQDPH 193 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P +L G++ I + L G +E G+ Q V + F Sbjct: 194 LQQGDVR-FEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFIL 252 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 V +DYG N+RV L Sbjct: 253 AGYHDVETCRDYGDNERVTLGR 274 >gi|331006966|ref|ZP_08330209.1| Methylase of polypeptide chain release factors [gamma proteobacterium IMCC1989] gi|330419228|gb|EGG93651.1| Methylase of polypeptide chain release factors [gamma proteobacterium IMCC1989] Length = 289 Score = 282 bits (722), Expect = 3e-74, Method: Composition-based stats. Identities = 79/262 (30%), Positives = 122/262 (46%), Gaps = 4/262 (1%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A D+ L + + P+ +L Q+ + R L E I I+G ++F++ Sbjct: 28 ARLDTEILLAHALEKNRTYLYTWPEKLLTVEQQTIFNQLMQRRLNGEPIAYIVGEKEFWS 87 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L ++ T PRP+TE++V++AL+ E ++DLGTGTGA+ LAL E P + Sbjct: 88 LALFVNESTLIPRPDTEVMVETALS-LFVDDEPEKQRSVVDLGTGTGAIALALASEKPCW 146 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVD 181 + D S A E+AK N + + L SDW +V+ D+IVSNPPYI Sbjct: 147 DIIAADNSVAACELAKKNQQRHQL-HNVTVLCSDWLVAVDVADVDLIVSNPPYIHENDPH 205 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P +L +GL+ TI L G +E GY Q +V I + Sbjct: 206 LFQGDVR-FEPHSALTAKNNGLADIETIVLQAKHVLRPSGWLLIEHGYQQSAEVKEILQK 264 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 + L D G R+ + Sbjct: 265 NQYTLCRTINDMAGQSRMTMGQ 286 >gi|327481906|gb|AEA85216.1| methyl transferase [Pseudomonas stutzeri DSM 4166] Length = 275 Score = 282 bits (722), Expect = 4e-74, Method: Composition-based stats. Identities = 87/262 (33%), Positives = 133/262 (50%), Gaps = 8/262 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A D+ L G S+ + P+ + + R + E + ILG + F++ Sbjct: 19 ARLDAEWLLAAALGKSTSYLRTWPEREVPGDLAERFAADLARRRRGEPVAYILGRQGFWS 78 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L ++ DT PRP+TELLV++AL ++ R+LDLGTGTGA+ LAL E P + Sbjct: 79 LELEVAPDTLIPRPDTELLVETAL-----QLLPATPARVLDLGTGTGAIALALAAERPQW 133 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181 + GVD A+ +A+ N + G+ +SDWF+ V G F +IVSNPPYI + Sbjct: 134 QVSGVDRIEAAVVLAERNRLRLGLG-NAHFARSDWFAEVTGERFQLIVSNPPYIPASDPH 192 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P+ +L G+DGL RTI HL G +E G++Q V + + Sbjct: 193 LQQGDVR-FEPQSALVAGVDGLDDIRTIIAQAPAHLTAGGWLLLEHGFDQAPAVRSLMAA 251 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 + +D GG++RV L Sbjct: 252 HGFEACESRRDLGGHERVSLGR 273 >gi|327393651|dbj|BAK11073.1| protein methyltransferase HemK [Pantoea ananatis AJ13355] Length = 280 Score = 282 bits (722), Expect = 4e-74, Method: Composition-based stats. Identities = 83/262 (31%), Positives = 130/262 (49%), Gaps = 8/262 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 RD+ L VTG S ++ +++L + Q L + R + E + ++G R+F++ Sbjct: 20 PKRDAEILLGFVTGKSRSWLVAFDETLLTEAQLQQLDVLLARRARGEPVAHLIGEREFWS 79 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L ++ T PRP+TE+LV+ ALA R+LD+GTG+GA+ LA+ E P Sbjct: 80 LPLQVNDATLIPRPDTEILVEQALAHL-----PESPARVLDMGTGSGAIALAIASERPDC 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVD 181 +GVD A+ +A+ NA + +QS WF+ + FD+IVSNPPYI++ Sbjct: 135 DVIGVDRIPAAVALAQRNAAHLAIP-NATFIQSHWFAQITPARFDLIVSNPPYIDANDRH 193 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+PR +L GL+ R + + L G +E G+ Q V + + Sbjct: 194 LNEGDVR-FEPRSALVAEEAGLADLRLLIEQAINWLQPGGWLLLEHGWQQDEAVRHLMQQ 252 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 V DYGGN RV Sbjct: 253 HHYLSVATANDYGGNPRVTFGQ 274 >gi|259908617|ref|YP_002648973.1| Protein methyltransferase [Erwinia pyrifoliae Ep1/96] gi|224964239|emb|CAX55746.1| Protein methyltransferase [Erwinia pyrifoliae Ep1/96] gi|283478590|emb|CAY74506.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Erwinia pyrifoliae DSM 12163] Length = 281 Score = 282 bits (722), Expect = 4e-74, Method: Composition-based stats. Identities = 90/263 (34%), Positives = 135/263 (51%), Gaps = 8/263 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 RD+ L VTG S +I DS LD L + R E I + G R+F++ Sbjct: 20 PKRDAEILLGFVTGKSRAWLIGFDDSELDAAALAQLDALLKRRTAGEPIAYLTGEREFWS 79 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L+++ DT PRP++E+LV+ ALA ILDLGTG+GA+ LAL E P Sbjct: 80 LSLSVTPDTLIPRPDSEVLVEQALAHL-----PVAAGSILDLGTGSGAIALALASERPDC 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVD 181 + +G+D A+ +A+ NA G++ + DWFS+++ F VIVSNPPYI++ Sbjct: 135 QVIGIDRIPAAVALAQHNAARLGLT-NATFMPGDWFSALKQQQFAVIVSNPPYIDATDKH 193 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P +L G GL+ + IA ++L G +E G+ Q + +I Sbjct: 194 LSQGDVR-FEPASALVAGDGGLADIKIIAAQAGQYLANGGWLLLEHGWQQGAQIRQILSD 252 Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264 + +DYGGNDRV + Sbjct: 253 HHFCQIATCQDYGGNDRVTYGQK 275 >gi|332980840|ref|YP_004462281.1| protein-(glutamine-N5) methyltransferase [Mahella australiensis 50-1 BON] gi|332698518|gb|AEE95459.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Mahella australiensis 50-1 BON] Length = 281 Score = 282 bits (722), Expect = 4e-74, Method: Composition-based stats. Identities = 80/263 (30%), Positives = 127/263 (48%), Gaps = 6/263 (2%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A RD L + + + +D L Q+ I + + +L F + Sbjct: 22 ARRDVEILLQELLDVDRSALYLDRSRALLPEQKIMFEQWIKQRCARMPLQYVLHKAWFMD 81 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L + PRPETELLV+ + + E +++LD+GTG+GA+ +AL + Sbjct: 82 MELYVDERVLIPRPETELLVEVVIKEAKGMSE---PLQVLDIGTGSGAIAIALARHMSGC 138 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181 + VDIS AL +A+ N + +R L+ + F V+G+ FD+IVSNPPYI + Sbjct: 139 RVWAVDISPDALAVARINVGKYSLQQRVTLLEGNLFEPVKGMAFDIIVSNPPYIVRDDLI 198 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 L EVR +P +L+GG DGL YR + L G ++EIGY+Q V I ++ Sbjct: 199 ELEPEVRS-EPEPALNGGDDGLDFYRKLCH-AGELLKPHGFLALEIGYDQGQAVSDILKA 256 Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264 + KD+ DR++L + Sbjct: 257 CGFKDIQVLKDFANMDRIVLAHK 279 >gi|54295178|ref|YP_127593.1| hypothetical protein lpl2258 [Legionella pneumophila str. Lens] gi|53755010|emb|CAH16498.1| hypothetical protein lpl2258 [Legionella pneumophila str. Lens] Length = 287 Score = 282 bits (722), Expect = 4e-74, Method: Composition-based stats. Identities = 84/264 (31%), Positives = 131/264 (49%), Gaps = 7/264 (2%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 + ++ LC V + + PD+++ Q I + + I I G R+F+ Sbjct: 21 ETKLEAELLLCHVLNKNRAYLFAHPDALVSPEQIETYLQMIKQRAEGLPIAYITGQREFW 80 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 ++ L ++ + PR ETE LV+ AL I ++ V +LDLGTG+GA+ LAL KE P Sbjct: 81 SLSLKVTPNVLIPRHETEHLVELALEL----IPDKENVSVLDLGTGSGAIALALAKERPL 136 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIV 180 ++ D S +ALE+A NA T G+ + S WF+++ + IVSNPPYI Sbjct: 137 WRIDACDFSKEALELACYNAKTLGL-NNINFCHSYWFNNLPLKQYHAIVSNPPYIAENDP 195 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 +VR F+P +L DGL+ + I +L DGL VE G+ QK ++ I Sbjct: 196 HLKQGDVR-FEPTSALVSSQDGLADLQYIIQHSYEYLLPDGLLLVEHGFEQKNEISTILN 254 Query: 241 SRKLFLVNAFKDYGGNDRVLLFCR 264 ++ ++D G+DRV R Sbjct: 255 QLGYKNIHCWQDLQGHDRVSGGQR 278 >gi|257466435|ref|ZP_05630746.1| methyltransferase [Fusobacterium gonidiaformans ATCC 25563] gi|315917591|ref|ZP_07913831.1| polypeptide chain release factor methyltransferase HemK [Fusobacterium gonidiaformans ATCC 25563] gi|313691466|gb|EFS28301.1| polypeptide chain release factor methyltransferase HemK [Fusobacterium gonidiaformans ATCC 25563] Length = 368 Score = 282 bits (722), Expect = 4e-74, Method: Composition-based stats. Identities = 84/265 (31%), Positives = 135/265 (50%), Gaps = 7/265 (2%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDF 60 A D+ V ++ + + + + + Q+ L +++ K + + ILG +F Sbjct: 105 NAKLDAEYIFADVLKVNRNMLSLYLHREISEEQKQELREKLIQRGKFRKPLQYILGKWEF 164 Query: 61 YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120 Y PR +TE+LV+ A SL +++ +ILD+GTGTGA+ + L KE P Sbjct: 165 YGYEFITDERALIPRADTEILVEQAKILSL----EKENPKILDIGTGTGAIAITLAKEVP 220 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVI 179 + +G+DIS +AL +AK N LQS+ F +EG FD+IVSNPPYI Sbjct: 221 EAEVLGIDISERALSLAKEN-KEYQFVRNVSFLQSNLFEKLEGKSFDIIVSNPPYIPQEE 279 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 + L EV++++P+ +L DG S Y+ I + +LN+ G E+GY Q V + Sbjct: 280 YEDLMPEVKNYEPKNALTDAGDGYSFYQRIIQEANGYLNEKGYLLFEVGYQQAEQVKQWM 339 Query: 240 ESRKLFLVNAFKDYGGNDRVLLFCR 264 E K + +DY G+ RV+L + Sbjct: 340 EEEKFEDLYIAEDYAGHQRVVLGRK 364 >gi|223935327|ref|ZP_03627245.1| protein-(glutamine-N5) methyltransferase, release factor-specific [bacterium Ellin514] gi|223896211|gb|EEF62654.1| protein-(glutamine-N5) methyltransferase, release factor-specific [bacterium Ellin514] Length = 289 Score = 282 bits (722), Expect = 4e-74, Method: Composition-based stats. Identities = 79/258 (30%), Positives = 121/258 (46%), Gaps = 2/258 (0%) Query: 8 HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67 L V + + ++ + L ++ + + R E + ILG F + + Sbjct: 29 ELMLAHVLKMKRMALYLNFEKPLGSKELDEVREMVRRRGGREPLQHILGSTCFCGLEFEV 88 Query: 68 SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 + PRPETELL + F LD GTG+G + + + +SP + + Sbjct: 89 NPKVLIPRPETELLAELGWQFLNSLPSSPTPPVALDYGTGSGCLAVTVAAKSPTAQLHAL 148 Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCLGL 185 DIS AL A+ NA T+ + R D F++V F++I+SNPPYI S + L Sbjct: 149 DISPDALATAQKNAATHQMGSRIQFHLGDGFAAVPPGLQFNLIISNPPYIASDEIATLQP 208 Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245 EVRD DPR++LDGG DGL YR +A + L +G +E G Q + ++FE K Sbjct: 209 EVRDHDPRLALDGGRDGLDFYRRLAKEAAPRLLPNGKIMLEFGEGQAEAIQKLFEDEKWV 268 Query: 246 LVNAFKDYGGNDRVLLFC 263 + DY G R+L+ Sbjct: 269 VEGVKADYSGRLRILIAR 286 >gi|85711947|ref|ZP_01043001.1| HemK [Idiomarina baltica OS145] gi|85694133|gb|EAQ32077.1| HemK [Idiomarina baltica OS145] Length = 282 Score = 282 bits (722), Expect = 4e-74, Method: Composition-based stats. Identities = 88/261 (33%), Positives = 133/261 (50%), Gaps = 10/261 (3%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 A DS L + + P+ L D Q L N + R + E + I+G R+F+ Sbjct: 24 DAQVDSRVLLSYLLDKPLSYFMTWPERRLTDAQFQQLQNWVARRCRGEPVAYIVGEREFW 83 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 ++ L + T PRP+TE LV++AL+ SLP R+LDLGTGTGA+ LAL E P Sbjct: 84 SLSLAVDKSTLIPRPDTECLVETALSLSLPA-----DARVLDLGTGTGAIALALKSERPD 138 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL--FDVIVSNPPYIESVI 179 ++ VD S A+ +A+ NA G++ + L S WF S+ +D+IVSNPPYI Sbjct: 139 WQVTAVDWSASAVSLAQRNARRLGLA--VEVLHSHWFDSLADRSVYDLIVSNPPYIAEDD 196 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 +VR F+PR +L G++ IA+ +L +G +E G+ Q V+ + Sbjct: 197 AHLAQGDVR-FEPRSALVAERAGIADLHHIAEQGHAYLKPNGWLLMEHGWQQAQAVITLL 255 Query: 240 ESRKLFLVNAFKDYGGNDRVL 260 VN ++DYG +R+ Sbjct: 256 REFGYKNVNIWRDYGNVERIT 276 >gi|257482008|ref|ZP_05636049.1| hemK protein [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 277 Score = 281 bits (721), Expect = 4e-74, Method: Composition-based stats. Identities = 83/263 (31%), Positives = 125/263 (47%), Gaps = 7/263 (2%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A D L G + P+ ++ + R E + ILG + F+ Sbjct: 19 ARLDIELLLAAALGKPRSFLHTWPERIVSTEAALAFAGYLQRRCTGEPVAYILGQQGFWK 78 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L ++ T PRPETE+LV++AL + ++LDLGTGTGA+ LAL E + Sbjct: 79 LDLEVAPHTLIPRPETEMLVEAALELA----PAFAPAKVLDLGTGTGAIALALANERQQW 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181 K VD +A+ +A+ N + + L S WFS++EG FD+I+SNPPYI Sbjct: 135 KVTAVDRVPEAVALAERNRQRLQL-DNAQVLNSHWFSALEGQQFDLIISNPPYIADADPH 193 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P +L G DGL RTI HL+ DG +E GY+Q V + Sbjct: 194 LSAGDVR-FEPSSALTAGSDGLDDLRTIIADAPVHLSADGWLLLEHGYDQGPAVRELLIR 252 Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264 + +D G ++R+ C+ Sbjct: 253 HGFERIQTRRDLGEHERITFGCK 275 >gi|153828622|ref|ZP_01981289.1| hemK protein [Vibrio cholerae 623-39] gi|148875893|gb|EDL74028.1| hemK protein [Vibrio cholerae 623-39] Length = 286 Score = 281 bits (721), Expect = 5e-74, Method: Composition-based stats. Identities = 89/263 (33%), Positives = 125/263 (47%), Gaps = 9/263 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 D+ LC V ++ PD L+ L + R E + ILG R+F++ Sbjct: 24 PALDAAVLLCHVLAKPRSYLLTWPDKTLEKPTLASLELLLARRRAGEPMAYILGEREFWS 83 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +S T PRP+TE LV+ AL + +LDLGTGTGA+ LAL E P Sbjct: 84 LPLKVSPSTLIPRPDTERLVELALDKAALID-----GELLDLGTGTGAIALALASELPTR 138 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIV 180 + G+D+ +A E+A+ NA + LQ WFS + F +IVSNPPYIE Sbjct: 139 QVTGIDLRPEAAELARENATRLAI-HNAQFLQGSWFSPLADGTKFALIVSNPPYIEENDP 197 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 +VR F+P+ +L +GL+ R I+ R L G E GY+Q V V I Sbjct: 198 HLSLGDVR-FEPKSALVAAENGLADIRHISTHAPRFLLDGGWLLFEHGYDQGVAVRTILR 256 Query: 241 SRKLFLVNAFKDYGGNDRVLLFC 263 + +DY G+DRV L Sbjct: 257 DLGYQNIITEQDYAGHDRVTLGQ 279 >gi|289647288|ref|ZP_06478631.1| hemK protein [Pseudomonas syringae pv. aesculi str. 2250] Length = 277 Score = 281 bits (721), Expect = 5e-74, Method: Composition-based stats. Identities = 83/263 (31%), Positives = 125/263 (47%), Gaps = 7/263 (2%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A D L G + P+ ++ + R E + ILG + F+ Sbjct: 19 ARLDIELLLAAALGKPRSFLHTWPERIVSTEAALAFAGYLQRRRTGEPVAYILGQQGFWK 78 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L ++ T PRPETE+LV++AL + ++LDLGTGTGA+ LAL E + Sbjct: 79 LDLEVAPHTLIPRPETEMLVEAALELA----PAFAPAKVLDLGTGTGAIALALANERQQW 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181 K VD +A+ +A+ N + + L S WFS++EG FD+I+SNPPYI Sbjct: 135 KVTAVDRVPEAVALAERNRQRLQL-DNAQVLNSHWFSALEGQQFDLIISNPPYIADADPH 193 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P +L G DGL RTI HL+ DG +E GY+Q V + Sbjct: 194 LSAGDVR-FEPSSALTAGSDGLDDLRTIIADAPVHLSADGWLLLEHGYDQGPAVRELLTR 252 Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264 + +D G ++R+ C+ Sbjct: 253 HGFERIQTRRDLGEHERITFGCK 275 >gi|257464823|ref|ZP_05629194.1| HemK-like protein/protein-glutamine N-methyl transferase [Actinobacillus minor 202] gi|257450483|gb|EEV24526.1| HemK-like protein/protein-glutamine N-methyl transferase [Actinobacillus minor 202] Length = 289 Score = 281 bits (721), Expect = 5e-74, Method: Composition-based stats. Identities = 96/266 (36%), Positives = 147/266 (55%), Gaps = 4/266 (1%) Query: 1 MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60 + D++ L VT S + ++VL + + L + R K E I ILG ++F Sbjct: 24 LNVKVDANVLLQAVTKRSKSAIFAFSETVLSEAELTELNALLARRAKGEPIAYILGEKEF 83 Query: 61 YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES- 119 +++ L +S+ T PRP+TE LV+ AL ++ R+ ++ ++ILDLGTGTGA+ LAL E Sbjct: 84 WSLPLAVSTATLIPRPDTECLVEVALEWAYKRLNSQETLQILDLGTGTGAIALALASELG 143 Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESV 178 + +GVD +A+++A+ N G E+ LQSDWFS +E FD+IVSNPPYI+ Sbjct: 144 EKAQIIGVDKQAEAVQLAEQNRQNLGF-EQVRFLQSDWFSVLENHCFDLIVSNPPYIDKD 202 Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238 + +VR F+P +L GLS + I + +L K G +E G+ Q DV +I Sbjct: 203 DENLTKGDVR-FEPLTALVAEQHGLSDLQKIIENAPLYLAKQGALMLEHGWQQAADVQQI 261 Query: 239 FESRKLFLVNAFKDYGGNDRVLLFCR 264 F+ + + FKDYG DR+ R Sbjct: 262 FKQNQWDKIETFKDYGNQDRITKAER 287 >gi|238895294|ref|YP_002920029.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Klebsiella pneumoniae NTUH-K2044] gi|238547611|dbj|BAH63962.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length = 282 Score = 281 bits (721), Expect = 5e-74, Method: Composition-based stats. Identities = 89/262 (33%), Positives = 130/262 (49%), Gaps = 8/262 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 RD+ L VTG + ++ ++ L + L +VR + E I ++G R+F++ Sbjct: 20 PRRDAEILLGHVTGRARTWILAFGETTLSADEAAKLEALLVRRQRGEPIAHLVGQREFWS 79 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +S T PRP+TE LV+ ALA RILDLGTGTGA+ LAL E P Sbjct: 80 LPLFVSPATLIPRPDTECLVEQALARL-----PTAPCRILDLGTGTGAIALALASERPDC 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181 + VD+ A+ +A NA ++ QSDWFS++ G F IVSNPPYI++ Sbjct: 135 EVTAVDVMPDAVALALRNAEHLSIA-NVTISQSDWFSALAGQRFATIVSNPPYIDAADPH 193 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P +L G GL+ I ++L G +E G+ Q V +F Sbjct: 194 LAEGDVR-FEPLTALVAGDQGLADLAHIIREGRQYLQPGGWMLLEHGWTQGEAVRALFRE 252 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 V +DYG N+R+ L Sbjct: 253 AGYLDVATCRDYGDNERLTLGR 274 >gi|157826556|ref|YP_001495620.1| bifunctional N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase/tRNA (m7G46) methyltransferase [Rickettsia bellii OSU 85-389] gi|157801860|gb|ABV78583.1| bifunctional N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase/tRNA (m7G46) methyltransferase [Rickettsia bellii OSU 85-389] Length = 563 Score = 281 bits (721), Expect = 5e-74, Method: Composition-based stats. Identities = 80/289 (27%), Positives = 137/289 (47%), Gaps = 30/289 (10%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 ++ L ++ +P+ L+ + + + R LKH+ I ILG ++FY Sbjct: 23 NPKLEARILLQHAINKPYEYLLANPEKQLNQLEIEAVEKVLERRLKHKPIAYILGTKEFY 82 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR------------------------- 96 + ++ PR +TE+L+D L + + Sbjct: 83 SREFIVNKHVLIPRNDTEILIDVVLQYHSQHFQYHSQHSLCHSSNGGNPDKKQLDSVVKP 142 Query: 97 ----DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152 IL+LGTG+G + ++LL E P + DIS A+E+AKSNA+ + V++R Sbjct: 143 RNNIKSSNILELGTGSGCISISLLLELPNSQITATDISIDAIEVAKSNAIKHDVTDRLQI 202 Query: 153 LQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIAD 211 + S+WF ++ + FD+IVSNPPYI + +E +++P I+L DGL Y+ IA+ Sbjct: 203 IHSNWFENIGKQKFDLIVSNPPYISINEKPEMAIETINYEPSIALFAEEDGLLSYKIIAE 262 Query: 212 GVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 + L ++G +EIGY Q V +IF + N +D ++RV+ Sbjct: 263 NAKKFLKQNGKIILEIGYKQADQVSQIFLDHGYVIDNIHQDLQSHNRVI 311 >gi|229528815|ref|ZP_04418205.1| methylase of polypeptide chain release factors [Vibrio cholerae 12129(1)] gi|229332589|gb|EEN98075.1| methylase of polypeptide chain release factors [Vibrio cholerae 12129(1)] Length = 286 Score = 281 bits (721), Expect = 5e-74, Method: Composition-based stats. Identities = 89/263 (33%), Positives = 126/263 (47%), Gaps = 9/263 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 D+ LC V ++ PD +L+ L + R E + ILG R+F++ Sbjct: 24 PALDAAVLLCHVLAKPRSYLLTWPDKILEKPTLASLELLLARRRAGEPMAYILGEREFWS 83 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +S T PRP+TE LV+ AL + +LDLGTGTGA+ LAL E P Sbjct: 84 LPLKVSPSTLIPRPDTERLVELALDKAALID-----GELLDLGTGTGAIALALASELPTR 138 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIV 180 + G+D+ +A E+A+ NA + LQ WFS + F +IVSNPPYIE Sbjct: 139 QVTGIDLRPEAAELARENATRLAI-HNAQFLQGSWFSPLADGTKFALIVSNPPYIEENDP 197 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 +VR F+P+ +L +GL+ R I+ R L G E GY+Q V V I Sbjct: 198 HLSLGDVR-FEPKSALVAAENGLADIRHISTHAPRFLLDGGWLLFEHGYDQGVAVRTILR 256 Query: 241 SRKLFLVNAFKDYGGNDRVLLFC 263 + +DY G+DRV L Sbjct: 257 DLGYQNIITEQDYAGHDRVTLGQ 279 >gi|331682701|ref|ZP_08383320.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli H299] gi|331080332|gb|EGI51511.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli H299] Length = 277 Score = 281 bits (721), Expect = 5e-74, Method: Composition-based stats. Identities = 90/262 (34%), Positives = 125/262 (47%), Gaps = 8/262 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 RD+ L VTG ++ ++ L D Q L + R E I + G R+F++ Sbjct: 20 PRRDAEILLEHVTGRGRTFILAFGETQLTDEQCQQLDALLTRRRDGEPIAHLTGVREFWS 79 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +S T PRP+TE LV+ ALA RILDLGTGTGA+ LAL E P Sbjct: 80 LPLFVSPATLIPRPDTECLVEQALARL-----PEQPCRILDLGTGTGAIALALACERPDC 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181 + VD A+ +A+ NA + LQSDWFS++ G F +IVSNPPYI+ Sbjct: 135 EITAVDRMPDAVSLAQRNAQHLAIK-NIHILQSDWFSALAGQQFAMIVSNPPYIDDQDPH 193 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P +L G++ I + L G +E G+ Q V + F Sbjct: 194 LQQGDVR-FEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFIL 252 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 V +DYG N+RV L Sbjct: 253 AGYHDVETCRDYGDNERVTLGR 274 >gi|15677887|ref|NP_275055.1| hemK protein [Neisseria meningitidis MC58] gi|7227327|gb|AAF42384.1| hemK protein [Neisseria meningitidis MC58] Length = 423 Score = 281 bits (721), Expect = 6e-74, Method: Composition-based stats. Identities = 89/263 (33%), Positives = 123/263 (46%), Gaps = 12/263 (4%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 ++ L V+ + Q++ + D R R L E + ILG R+FY Sbjct: 163 PKNEARMLLQYVSEYTRVQLLTRGGEEMPDEVRQRADRLAQRRLNGEPVAYILGVREFYG 222 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 R T++ PRPETE LV++ LA + R+ DLGTG+GAV + + E P Sbjct: 223 RRFTVNPSVLIPRPETEHLVEAVLARL------PENGRVWDLGTGSGAVAVTVALERPDA 276 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS---SVEGLFDVIVSNPPYIESVI 179 DIS ALE A+ NA G R + WF EG +D+IVSNPPYIE+ Sbjct: 277 FVRASDISPPALETARKNAADLGA--RVEFAHGSWFDTDMPSEGKWDIIVSNPPYIENGD 334 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 L ++R F+P+I+L DGLS RT+A G L + G +E G++Q V + Sbjct: 335 KHLLQGDLR-FEPQIALTDFSDGLSCIRTLAQGAPDRLAEGGFLLLEHGFDQGAAVRGVL 393 Query: 240 ESRKLFLVNAFKDYGGNDRVLLF 262 V D G DRV L Sbjct: 394 AENGFSGVETLPDLAGLDRVTLG 416 >gi|254497856|ref|ZP_05110622.1| protein methyltransferase HemK [Legionella drancourtii LLAP12] gi|254352934|gb|EET11703.1| protein methyltransferase HemK [Legionella drancourtii LLAP12] Length = 261 Score = 281 bits (721), Expect = 6e-74, Method: Composition-based stats. Identities = 85/264 (32%), Positives = 132/264 (50%), Gaps = 7/264 (2%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 ++ LC + + + P+ +L D Q N + + I I G R+F+ Sbjct: 4 NPELEAEILLCYLLKKNRAYLFAHPEELLSDEQFATYQNLLAERAQGVPIAYITGEREFW 63 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 ++ L ++ T PR ETELLV+ AL ++ IL+LGTG+GA+ LAL KE P Sbjct: 64 SLNLKVNRHTLIPRHETELLVELALE----KLPNSPNTCILELGTGSGAIALALAKERPQ 119 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIV 180 + V D+S +AL IAK NA+ + +S SDW+S++ + I+SNPPYI Sbjct: 120 WHIVACDVSEEALLIAKENALHHQLS-NVTFYHSDWYSNIPQQQYHAIISNPPYIAEQDP 178 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 ++R F+P +L G GL+ I +L +G+ +E GY+QK++V I Sbjct: 179 HLNEGDLR-FEPYNALASGQQGLADLLLIIKQGYDYLLPNGVLLLEHGYDQKLNVQAILI 237 Query: 241 SRKLFLVNAFKDYGGNDRVLLFCR 264 V ++KD G+DRV R Sbjct: 238 ELGYKNVQSWKDIQGHDRVSGGWR 261 >gi|51474015|ref|YP_067772.1| bifunctional N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase/tRNA (m7G46) methyltransferase [Rickettsia typhi str. Wilmington] gi|81389917|sp|Q68VR6|HEMK_RICTY RecName: Full=Bifunctional methyltransferase; Includes: RecName: Full=HemK protein homolog; Includes: RecName: Full=tRNA (guanine-N(7)-)-methyltransferase; AltName: Full=tRNA(m7G46)-methyltransferase gi|51460327|gb|AAU04290.1| bifunctional methyltransferase [Rickettsia typhi str. Wilmington] Length = 518 Score = 281 bits (720), Expect = 6e-74, Method: Composition-based stats. Identities = 77/273 (28%), Positives = 136/273 (49%), Gaps = 15/273 (5%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 ++ L VT +++ + L + + + R L+HE I I G ++FY+ Sbjct: 24 PELEARILLQHVTNKPIEHLLIKLNEQLSEAEIEAFEKLLERRLEHEPIAYITGIKEFYS 83 Query: 63 VRLTLSSDTFEPRPETELLVDSALA--------------FSLPRIEKRDVVRILDLGTGT 108 ++ PR +TE+L+D + SL ++ IL+LGTG+ Sbjct: 84 REFIVNKHVLIPRIDTEILIDVVIGLVVSRNDLNTCSKLKSLDSVKTIQHYNILELGTGS 143 Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDV 167 G + ++LL E P + DIS A+++AKSN + + V++R + S+WF + + FD+ Sbjct: 144 GCIAISLLCELPNTSVIATDISVDAIKVAKSNTIKHNVTDRIQIIHSNWFEKLNKQKFDL 203 Query: 168 IVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227 IVSNPPYI + +E +++P I+L DGL Y IA + L +G +EI Sbjct: 204 IVSNPPYISHSEKLEMAIETINYEPHIALFAEEDGLEAYSIIAKNAKQFLKPNGKIILEI 263 Query: 228 GYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 G++Q V +IF + + + ++D ++RV+ Sbjct: 264 GFSQAEKVCQIFLNYGYNIDHIYQDLQSHNRVI 296 >gi|145629733|ref|ZP_01785529.1| HemK [Haemophilus influenzae 22.1-21] gi|144978070|gb|EDJ87849.1| HemK [Haemophilus influenzae 22.1-21] Length = 264 Score = 281 bits (720), Expect = 6e-74, Method: Composition-based stats. Identities = 97/263 (36%), Positives = 141/263 (53%), Gaps = 12/263 (4%) Query: 9 SFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLS 68 L TG Q++ D+ +D++ R LT + R LK E I ILG ++F+++ L +S Sbjct: 1 MLLQYATGKPRTQILAFDDTEIDEKVRLKLTALLDRRLKGEPIAYILGEKEFWSLPLNVS 60 Query: 69 SDTFEPRPETELLVDSALAFSLPRIEKRDVV-RILDLGTGTGAVCLALL--------KES 119 T PRP+TE+LV+ AL SL ++E+ RILDLGTGTGA+ LAL K Sbjct: 61 KGTLIPRPDTEVLVEKALQISLEKLEQNPPHFRILDLGTGTGAIALALASELFSICQKRQ 120 Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179 + +GVD+ + +A+SNA N + LQS WF ++ G FD+IVSNPPYI+ Sbjct: 121 ISLEIIGVDLMPDVVALAQSNAERNQL--NVQFLQSRWFDNITGKFDLIVSNPPYIDVQD 178 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 +VR F+P +L G + R I + +LN +G +E G+ Q V IF Sbjct: 179 EHLHQGDVR-FEPLSALVANDAGYADLRYIIESAPNYLNFNGTLLLEHGWQQGEKVRSIF 237 Query: 240 ESRKLFLVNAFKDYGGNDRVLLF 262 + +V +DYG N+RV L Sbjct: 238 QENHWEMVETVRDYGDNERVTLG 260 >gi|328952116|ref|YP_004369450.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Desulfobacca acetoxidans DSM 11109] gi|328452440|gb|AEB08269.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Desulfobacca acetoxidans DSM 11109] Length = 296 Score = 281 bits (720), Expect = 6e-74, Method: Composition-based stats. Identities = 78/261 (29%), Positives = 131/261 (50%), Gaps = 3/261 (1%) Query: 7 SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66 + L G S + + D L + + + R L HE I G ++F+++ Sbjct: 34 AEVLLAHCLGGSRLDLYLHYDQPLGENELSCYKKLLKRRLAHEPTQYITGRQEFWSLDFL 93 Query: 67 LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126 ++ PRPETELLV+ A A+ + + VR++D+GTG+G + + L KE P + Sbjct: 94 VTPAVLIPRPETELLVEVAAAYLQGQRAEETSVRLIDVGTGSGVLAVVLAKEHPQAQVTA 153 Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVDCLG 184 +D S +AL +A+ NA +GV ER + D +++ E FD+IVSN PY+ + L Sbjct: 154 LDQSWEALCLARQNARRHGVEERIRFIMGDLLAALRPEAQFDLIVSNAPYVPTAEWLRLP 213 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK- 243 +++D++PR++LDGG DGL R + +L GL ++E+G Q V ++ Sbjct: 214 SDIKDYEPRLALDGGGDGLDVIRRLVQAAPGYLKAGGLLALEVGQGQSAAVEQLLAHGGA 273 Query: 244 LFLVNAFKDYGGNDRVLLFCR 264 +D+ RV+ R Sbjct: 274 FTPAEIRRDFQYIPRVVSARR 294 >gi|320637364|gb|EFX07171.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli O157:H7 str. G5101] Length = 277 Score = 281 bits (720), Expect = 6e-74, Method: Composition-based stats. Identities = 89/262 (33%), Positives = 125/262 (47%), Gaps = 8/262 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 RD+ L VTG ++ ++ L D Q L + R E I + G R+F++ Sbjct: 20 PRRDAEILLEHVTGRGRTFILAFGETQLTDEQCQQLDALLTRRRDGEPIAHLTGVREFWS 79 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +S T PRP+TE LV+ ALA RILDLGTGTGA+ LAL +E P Sbjct: 80 LPLFVSPATLIPRPDTECLVEQALARL-----PEQPCRILDLGTGTGAIALALARERPDC 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181 + VD A+ +A+ NA + LQSDWF ++ G F +IVSNPPYI+ Sbjct: 135 EITAVDRMPDAVALAQRNAQHLAIK-NIHILQSDWFRALAGQQFAMIVSNPPYIDEQDPH 193 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P +L G++ I + L G +E G+ Q V + F Sbjct: 194 LQQGDVR-FEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFIL 252 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 V +DYG N+RV L Sbjct: 253 AGYHDVETCRDYGDNERVTLGR 274 >gi|330887863|gb|EGH20524.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Pseudomonas syringae pv. mori str. 301020] Length = 277 Score = 281 bits (720), Expect = 6e-74, Method: Composition-based stats. Identities = 84/263 (31%), Positives = 126/263 (47%), Gaps = 7/263 (2%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A D L G + P+ ++ T + R E + ILG + F+ Sbjct: 19 ARLDIELLLAAALGKPRSFLHTWPERIVSTEAALAFTGYLQRRRTGEPVAYILGQQGFWK 78 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L ++ T PRPETE+LV++AL + ++LDLGTGTGA+ LAL E + Sbjct: 79 LDLEVAPHTLIPRPETEMLVEAALEL----VPAFAPAKVLDLGTGTGAIALALANERQQW 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181 K VD +A+ +A+ N + + L S WFS++EG FD+I+SNPPYI Sbjct: 135 KVTAVDRVPEAVALAERNRQRLQL-DNAQVLNSHWFSALEGQQFDLIISNPPYIADADPH 193 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P +L G DGL RTI HL+ DG +E GY+Q V + Sbjct: 194 LSAGDVR-FEPSSALTAGSDGLDDLRTIIADAPVHLSADGWLLLEHGYDQGPAVRELLIR 252 Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264 + +D G ++R+ C+ Sbjct: 253 HGFERIQTRRDLGEHERITFGCK 275 >gi|153213281|ref|ZP_01948693.1| hemK protein [Vibrio cholerae 1587] gi|124116081|gb|EAY34901.1| hemK protein [Vibrio cholerae 1587] Length = 286 Score = 281 bits (720), Expect = 6e-74, Method: Composition-based stats. Identities = 89/263 (33%), Positives = 125/263 (47%), Gaps = 9/263 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 D+ LC V ++ PD L+ L + R E + ILG R+F++ Sbjct: 24 PALDAAVLLCHVLAKPRSYLLTWPDKTLEKPTLASLDLLLARRRAGEPMAYILGEREFWS 83 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +S T PRP+TE LV+ AL + +LDLGTGTGA+ LAL E P Sbjct: 84 LSLKVSPSTLIPRPDTERLVELALDKAALID-----GELLDLGTGTGAIALALASELPMR 138 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIV 180 + G+D+ +A E+A+ NA + LQ WFS + F +IVSNPPYIE Sbjct: 139 QVTGIDLRPEAAELARENATRLAI-HNAQFLQGSWFSPLADGTKFALIVSNPPYIEENDP 197 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 +VR F+P+ +L +GL+ R I+ R L G E GY+Q V V I Sbjct: 198 HLSLGDVR-FEPKSALVAAENGLADIRHISTHAPRFLLDGGWLLFEHGYDQGVAVRTILR 256 Query: 241 SRKLFLVNAFKDYGGNDRVLLFC 263 + +DY G+DRV L Sbjct: 257 DLGYQNIITEQDYAGHDRVTLGQ 279 >gi|307256017|ref|ZP_07537805.1| Protein hemK [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306865439|gb|EFM97334.1| Protein hemK [Actinobacillus pleuropneumoniae serovar 10 str. D13039] Length = 296 Score = 281 bits (720), Expect = 6e-74, Method: Composition-based stats. Identities = 96/266 (36%), Positives = 149/266 (56%), Gaps = 4/266 (1%) Query: 1 MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60 + D++ L VT + + ++ L + L + R L+ E + ILG ++F Sbjct: 24 LNPKTDTNLLLQAVTKRTKSAIFAFGETALHQTELAELAQLLARRLQGEPMAYILGEKEF 83 Query: 61 YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES- 119 +++ L +S T PRP+TE LV+ AL ++ R++ + +RILDLGTGTGA+ LAL E Sbjct: 84 WSLPLKVSPHTLIPRPDTECLVEVALDWAYKRLKIQQTLRILDLGTGTGAIALALASELG 143 Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESV 178 + +GVD +A+++A++N G S LQSDWFS++E FD+IVSNPPYI+ Sbjct: 144 NNVQILGVDFKAEAVQLAETNRQNLGFS-NVSFLQSDWFSALENQQFDLIVSNPPYIDQQ 202 Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238 + +VR F+P +L DGLS + I HLN +G +E G+ Q V +I Sbjct: 203 DENLQYGDVR-FEPLSALVAEQDGLSDLQKIIQNAPLHLNDNGALILEHGWQQAQAVQQI 261 Query: 239 FESRKLFLVNAFKDYGGNDRVLLFCR 264 F+ + + +F+DYGGNDR+ R Sbjct: 262 FQQYQWDEIASFQDYGGNDRLTKAIR 287 >gi|16129175|ref|NP_415730.1| N5-glutamine methyltransferase, modifies release factors RF-1 and RF-2 [Escherichia coli str. K-12 substr. MG1655] gi|24112611|ref|NP_707121.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Shigella flexneri 2a str. 301] gi|30062736|ref|NP_836907.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Shigella flexneri 2a str. 2457T] gi|89108057|ref|AP_001837.1| N5-glutamine methyltransferase, modifies release factors RF-1 and RF-2 [Escherichia coli str. K-12 substr. W3110] gi|157160717|ref|YP_001458035.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli HS] gi|170020421|ref|YP_001725375.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli ATCC 8739] gi|170080840|ref|YP_001730160.1| release factors RF-1 and RF-2 N5-glutamine methyltransferase [Escherichia coli str. K-12 substr. DH10B] gi|187731012|ref|YP_001879995.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Shigella boydii CDC 3083-94] gi|188492205|ref|ZP_02999475.1| protein methyltransferase HemK [Escherichia coli 53638] gi|218553766|ref|YP_002386679.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli IAI1] gi|238900443|ref|YP_002926239.1| N5-glutamine methyltransferase, modifies release factors RF-1 and RF-2 [Escherichia coli BW2952] gi|256018538|ref|ZP_05432403.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Shigella sp. D9] gi|256023111|ref|ZP_05436976.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia sp. 4_1_40B] gi|260854873|ref|YP_003228764.1| N5-glutamine methyltransferase [Escherichia coli O26:H11 str. 11368] gi|260867617|ref|YP_003234019.1| N5-glutamine methyltransferase [Escherichia coli O111:H- str. 11128] gi|300816903|ref|ZP_07097123.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS 107-1] gi|300951679|ref|ZP_07165503.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS 116-1] gi|300955612|ref|ZP_07167969.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS 175-1] gi|301029485|ref|ZP_07192567.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS 196-1] gi|312971399|ref|ZP_07785574.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli 1827-70] gi|331652250|ref|ZP_08353269.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli M718] gi|331667596|ref|ZP_08368460.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli TA271] gi|332279598|ref|ZP_08392011.1| protoporphyrinogen oxidase hemK [Shigella sp. D9] gi|81170789|sp|P0ACC1|HEMK_ECOLI RecName: Full=Protein methyltransferase hemK; AltName: Full=M.EcoKHemKP; AltName: Full=Protein-(glutamine-N(5)) MTase hemK; AltName: Full=Protein-glutamine N-methyltransferase hemK gi|81170790|sp|P0ACC2|HEMK_SHIFL RecName: Full=Protein methyltransferase hemK; AltName: Full=Protein-(glutamine-N(5)) MTase hemK; AltName: Full=Protein-glutamine N-methyltransferase hemK gi|50513699|pdb|1T43|A Chain A, Crystal Structure Analysis Of E.Coli Protein (N5)-Glutamine Methyltransferase (Hemk) gi|968931|gb|AAC43438.1| possible protoporphyrinogen oxidase [Escherichia coli] gi|1651602|dbj|BAA36070.1| N5-glutamine methyltransferase, modifies release factors RF-1 and RF-2 [Escherichia coli str. K12 substr. W3110] gi|1787463|gb|AAC74296.1| N5-glutamine methyltransferase, modifies release factors RF-1 and RF-2 [Escherichia coli str. K-12 substr. MG1655] gi|18376673|dbj|BAB84109.1| protein-(glutamine-N5) methyl transferase [Escherichia coli] gi|24051516|gb|AAN42828.1| possible protoporphyrinogen oxidase [Shigella flexneri 2a str. 301] gi|30040984|gb|AAP16714.1| possible protoporphyrinogen oxidase [Shigella flexneri 2a str. 2457T] gi|157066397|gb|ABV05652.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli HS] gi|169755349|gb|ACA78048.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli ATCC 8739] gi|169888675|gb|ACB02382.1| release factors RF-1 and RF-2 N5-glutamine methyltransferase [Escherichia coli str. K-12 substr. DH10B] gi|187428004|gb|ACD07278.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Shigella boydii CDC 3083-94] gi|188487404|gb|EDU62507.1| protein methyltransferase HemK [Escherichia coli 53638] gi|218360534|emb|CAQ98092.1| N5-glutamine methyltransferase, modifies release factors RF-1 and RF-2 [Escherichia coli IAI1] gi|238861844|gb|ACR63842.1| N5-glutamine methyltransferase, modifies release factors RF-1 and RF-2 [Escherichia coli BW2952] gi|257753522|dbj|BAI25024.1| N5-glutamine methyltransferase [Escherichia coli O26:H11 str. 11368] gi|257763973|dbj|BAI35468.1| N5-glutamine methyltransferase [Escherichia coli O111:H- str. 11128] gi|260449653|gb|ACX40075.1| modification methylase, HemK family [Escherichia coli DH1] gi|281600636|gb|ADA73620.1| Protein methyltransferase hemK [Shigella flexneri 2002017] gi|299877628|gb|EFI85839.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS 196-1] gi|300317505|gb|EFJ67289.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS 175-1] gi|300449125|gb|EFK12745.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS 116-1] gi|300530677|gb|EFK51739.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS 107-1] gi|310335996|gb|EFQ01196.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli 1827-70] gi|313649401|gb|EFS13832.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Shigella flexneri 2a str. 2457T] gi|315135848|dbj|BAJ43007.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli DH1] gi|320174902|gb|EFW50021.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Shigella dysenteriae CDC 74-1112] gi|320185615|gb|EFW60377.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Shigella flexneri CDC 796-83] gi|323153189|gb|EFZ39451.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli EPECa14] gi|323179273|gb|EFZ64843.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli 1180] gi|323942491|gb|EGB38659.1| protein-(glutamine-N5) methyltransferase [Escherichia coli E482] gi|323947505|gb|EGB43509.1| protein-(glutamine-N5) methyltransferase [Escherichia coli H120] gi|324117240|gb|EGC11147.1| protein-(glutamine-N5) methyltransferase [Escherichia coli E1167] gi|331050528|gb|EGI22586.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli M718] gi|331065181|gb|EGI37076.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli TA271] gi|332101950|gb|EGJ05296.1| protoporphyrinogen oxidase hemK [Shigella sp. D9] gi|332757865|gb|EGJ88192.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Shigella flexneri 4343-70] gi|332759447|gb|EGJ89755.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Shigella flexneri 2747-71] gi|332760306|gb|EGJ90596.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Shigella flexneri K-671] gi|332767446|gb|EGJ97640.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Shigella flexneri 2930-71] gi|333005051|gb|EGK24571.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Shigella flexneri VA-6] gi|333005663|gb|EGK25181.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Shigella flexneri K-218] gi|333007545|gb|EGK27023.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Shigella flexneri K-272] gi|333019222|gb|EGK38509.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Shigella flexneri K-304] gi|333019925|gb|EGK39197.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Shigella flexneri K-227] Length = 277 Score = 281 bits (720), Expect = 7e-74, Method: Composition-based stats. Identities = 90/262 (34%), Positives = 126/262 (48%), Gaps = 8/262 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 RD+ L VTG ++ ++ L D Q L + R E I + G R+F++ Sbjct: 20 PRRDAEILLEHVTGRGRTFILAFGETQLTDEQCQQLDALLTRRRDGEPIAHLTGVREFWS 79 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +S T PRP+TE LV+ ALA RILDLGTGTGA+ LAL E P Sbjct: 80 LPLFVSPATLIPRPDTECLVEQALARL-----PEQPCRILDLGTGTGAIALALASERPDC 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181 + + VD A+ +A+ NA + LQSDWFS++ G F +IVSNPPYI+ Sbjct: 135 EIIAVDRMPDAVSLAQRNAQHLAIK-NIHILQSDWFSALAGQQFAMIVSNPPYIDEQDPH 193 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P +L G++ I + L G +E G+ Q V + F Sbjct: 194 LQQGDVR-FEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFIL 252 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 V +DYG N+RV L Sbjct: 253 AGYHDVETCRDYGDNERVTLGR 274 >gi|241759168|ref|ZP_04757276.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Neisseria flavescens SK114] gi|241320587|gb|EER56864.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Neisseria flavescens SK114] Length = 270 Score = 281 bits (720), Expect = 7e-74, Method: Composition-based stats. Identities = 85/264 (32%), Positives = 121/264 (45%), Gaps = 12/264 (4%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 ++ L +G + Q++ + D R R LK E + +LG R+FY Sbjct: 13 PKNEARMLLKYASGYTRVQLLTRGGEEIPDEVRQRADRLAQRRLKGEPMAYLLGEREFYG 72 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 R ++ PRPETE LV++ L P+ R+ DLGTG+GA+ + + E Sbjct: 73 RRFAVNPHVLIPRPETEHLVEAVLKRLPPQ------GRVWDLGTGSGAIAVTVALERVDA 126 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS---SVEGLFDVIVSNPPYIESVI 179 DIS AL+ A+ NA G + + Q WF EG +DVIVSNPPYIE+ Sbjct: 127 DVRASDISTGALDTARQNAAELGA--KVEFAQGSWFDTDRPSEGRYDVIVSNPPYIENGD 184 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 ++R F+P+ +L DGLSH R I ++L +G E GY+Q V I Sbjct: 185 EHLSQGDLR-FEPQNALTDFSDGLSHIRHITQEAPKYLKANGWLLFEHGYDQGEAVRNIM 243 Query: 240 ESRKLFLVNAFKDYGGNDRVLLFC 263 V +D G DRV L Sbjct: 244 LKNGFAEVATEQDLAGLDRVTLGR 267 >gi|193213806|ref|YP_001995005.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Chloroherpeton thalassium ATCC 35110] gi|193087283|gb|ACF12558.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Chloroherpeton thalassium ATCC 35110] Length = 294 Score = 281 bits (720), Expect = 7e-74, Method: Composition-based stats. Identities = 79/266 (29%), Positives = 126/266 (47%), Gaps = 6/266 (2%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 A ++ L L + + D + +++R R L+ E + I+G +DF+ Sbjct: 27 DARLNAELLLAHTLNLKRMDLYLKFDMPVTEQERQTFRELCKRRLEGEPVQYIIGNQDFF 86 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 + L + S PRPETELLV+ AL + ++ILD+GTG+G + LA + Sbjct: 87 GLTLDVDSRVLIPRPETELLVEEALNSLSQLDFGDEKIKILDIGTGSGCIALAFASQLSN 146 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS-----VEGLFDVIVSNPPYIE 176 + + VD+S +AL +AK N+ N + L D S+ V G + +I+SNPPYI Sbjct: 147 AEILAVDVSSEALALAKQNSEKNKLKSEVRFLNIDMLSAHFYDEVPGSYHLIISNPPYIP 206 Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236 D L +EVR+F+P I+L G Y IA +R L +GL E+ + V Sbjct: 207 IAERDSLQVEVRNFEPAIALFV-QQGFEFYEKIAQEAARLLKPNGLLCFELHADGATKVN 265 Query: 237 RIFESRKLFLVNAFKDYGGNDRVLLF 262 I + + +DY G R+ + Sbjct: 266 IILKKNGFEQIRFVQDYAGFSRIAIA 291 >gi|296134390|ref|YP_003641637.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Thermincola sp. JR] gi|296032968|gb|ADG83736.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Thermincola potens JR] Length = 283 Score = 281 bits (720), Expect = 7e-74, Method: Composition-based stats. Identities = 76/264 (28%), Positives = 131/264 (49%), Gaps = 13/264 (4%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 + D+ L + G+ ++ ++ ++VL D Q N + R E + + G ++F Sbjct: 23 EPRLDAEVLLSYLLGMDRAKLYLNREAVLSDEQIGRFRNLVERRGLREPVAYLTGTKEFM 82 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 ++ ++S PRP+TE+LV+ LA ++D+GTG+GA+ ++ P Sbjct: 83 SLDFKVNSSVLIPRPDTEILVEEILAI--------KPALMVDVGTGSGAIAISAAYYLPE 134 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV----EGLFDVIVSNPPYIES 177 + DIS +AL +A+ NA+ GVS+R + +Q + + D+I +N PYI Sbjct: 135 TRVFATDISPEALNLARENAINLGVSDRIEFVQGNLLTPFINRPNFRVDLIAANLPYIPG 194 Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237 ++ L EVR ++P ++LDGG +GL Y+++ V R L G +EIGYNQ + Sbjct: 195 EVLKELPDEVRKYEPALALDGGCEGLDLYKSLIGQVPRVLKSGGRLLMEIGYNQSGLLAD 254 Query: 238 IFESRK-LFLVNAFKDYGGNDRVL 260 + KD G DRV+ Sbjct: 255 FLTQIPCFSGIRVIKDLSGRDRVV 278 >gi|222087302|ref|YP_002545839.1| protoporphyrinogen oxidase (methyltransferase) protein [Agrobacterium radiobacter K84] gi|221724750|gb|ACM27906.1| protoporphyrinogen oxidase (methyltransferase) protein [Agrobacterium radiobacter K84] Length = 291 Score = 281 bits (719), Expect = 7e-74, Method: Composition-based stats. Identities = 119/262 (45%), Positives = 165/262 (62%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 ++ + + LSS +++ + + AI R L HE +HRILG R+FY Sbjct: 27 DPATEARILVGGLLQLSSTELVTRGAEAVAPDRVEAARAAIARRLNHEPVHRILGEREFY 86 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 + + LS T EPRP+TE+LVD+ L + + +LD+GTGTGA+CLALL E Sbjct: 87 GLPMALSPATLEPRPDTEILVDTVLPHARRLATDHGTIHLLDMGTGTGAICLALLHECQQ 146 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181 G+G DIS +ALE A++NA NG++ RFDT+Q WF ++ G F VIVSNPPYIES ++ Sbjct: 147 AMGIGSDISGEALETARANAARNGLAARFDTVQGSWFEAIHGRFHVIVSNPPYIESSVIS 206 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 L EV++FDP +LDGG+DGL YR IA +R L++DG+ VEIGY+Q+ V +FE Sbjct: 207 TLAPEVKNFDPPAALDGGLDGLDAYRAIAKDAARFLHQDGIVGVEIGYDQRKTVTSVFEG 266 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 FL+ A +DYG NDRVL+F Sbjct: 267 AGFFLIEAARDYGHNDRVLVFQ 288 >gi|82544334|ref|YP_408281.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Shigella boydii Sb227] gi|157156593|ref|YP_001462465.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli E24377A] gi|300921822|ref|ZP_07137979.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS 182-1] gi|301327072|ref|ZP_07220354.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS 78-1] gi|81245745|gb|ABB66453.1| possible protoporphyrinogen oxidase [Shigella boydii Sb227] gi|157078623|gb|ABV18331.1| protein methyltransferase HemK [Escherichia coli E24377A] gi|300421748|gb|EFK05059.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS 182-1] gi|300846325|gb|EFK74085.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS 78-1] gi|332094776|gb|EGI99820.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Shigella boydii 3594-74] Length = 277 Score = 281 bits (719), Expect = 8e-74, Method: Composition-based stats. Identities = 90/262 (34%), Positives = 126/262 (48%), Gaps = 8/262 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 RD+ L VTG ++ ++ L D Q L + R E I + G R+F++ Sbjct: 20 PRRDAEILLEHVTGRGRTFILAFGETQLTDEQCQQLDALLTRRRDGEPIAHLTGGREFWS 79 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +S T PRP+TE LV+ ALA RILDLGTGTGA+ LAL E P Sbjct: 80 LPLFVSPATLIPRPDTECLVEQALARL-----PEQPCRILDLGTGTGAIALALASERPDC 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181 + + VD A+ +A+ NA + LQSDWFS++ G F +IVSNPPYI+ Sbjct: 135 EIIAVDRMPDAVSLAQRNAQHLAIK-NIHILQSDWFSALAGQQFAMIVSNPPYIDEQDPH 193 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P +L G++ I + L G +E G+ Q V + F Sbjct: 194 LQQGDVR-FEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFIL 252 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 V +DYG N+RV L Sbjct: 253 AGYHDVETCRDYGDNERVTLGR 274 >gi|16125128|ref|NP_419692.1| hemK family protein [Caulobacter crescentus CB15] gi|13422136|gb|AAK22860.1| hemK family protein [Caulobacter crescentus CB15] Length = 317 Score = 281 bits (719), Expect = 8e-74, Method: Composition-based stats. Identities = 94/264 (35%), Positives = 145/264 (54%), Gaps = 5/264 (1%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 Q D+ L G++ +++ DP L Q L + + R + E + I+G + F+ Sbjct: 51 QPSIDARLMLEVAAGVTRTEIVTDPYRELSAEQIATLNDYLERRARREPVSHIIGRKGFW 110 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 + L ++ + PRPETE++VD L + +LDLG G+G + LA+L E P Sbjct: 111 KILLQVNKNVLTPRPETEVIVDEVLK----AFPEHMAFSMLDLGVGSGTILLAVLAERPA 166 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIV 180 KG+G+D S +AL +A+ NA ++ R L DW + + FD++VSNPPYI + ++ Sbjct: 167 AKGLGIDASSEALAVARENAANLDLNTRAALLHGDWTTGLGSDSFDLVVSNPPYIPTEVI 226 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 D L EVR +PR++LDGG DGL+ YR +A + R L GL +VEIGY+Q V +F Sbjct: 227 DTLEPEVRIHEPRLALDGGPDGLAAYRELAPEILRVLKPGGLFAVEIGYDQSQAVEALFR 286 Query: 241 SRKLFLVNAFKDYGGNDRVLLFCR 264 + V KD +DRV+L + Sbjct: 287 AAGATEVRTVKDLSTHDRVVLGVK 310 >gi|313893578|ref|ZP_07827147.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Veillonella sp. oral taxon 158 str. F0412] gi|313441849|gb|EFR60272.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Veillonella sp. oral taxon 158 str. F0412] Length = 289 Score = 281 bits (719), Expect = 8e-74, Method: Composition-based stats. Identities = 83/264 (31%), Positives = 129/264 (48%), Gaps = 9/264 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 D L V G + D L + + + K S+ I G +DF Sbjct: 27 PRLDGEVLLSHVLGKDRIYLYTHYDQPLIQEELDAFRPLVQQRAKGYSVASITGQKDFMG 86 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + ++ PRP+TE L++ L + +RILD+ TG G + L+LL P Sbjct: 87 LTFKVNDKVLIPRPDTESLIEHVLD----TYSEDCNIRILDICTGPGTILLSLLHYLPNA 142 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG---LFDVIVSNPPYIESVI 179 GVG+DIS AL +A+ NA + +++R + +SD FS++ G FD+IVSNPPYI + Sbjct: 143 VGVGLDISTDALPLARENADSFNLTKRVEFKESDMFSALRGTDEKFDLIVSNPPYIRTGD 202 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 L +V + +P I+L GG DGL YR +A +L G + E+GY+Q V ++ Sbjct: 203 AKMLSQDVLN-EPHIALFGGEDGLVFYRILAKTCGAYLATSGRVAFEVGYDQAEAVRKLL 261 Query: 240 ESRK-LFLVNAFKDYGGNDRVLLF 262 E+ + D GG++RV+ Sbjct: 262 EATGQYSNIQFIADLGGHNRVVTA 285 >gi|294793890|ref|ZP_06759027.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Veillonella sp. 3_1_44] gi|294455460|gb|EFG23832.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Veillonella sp. 3_1_44] Length = 289 Score = 281 bits (719), Expect = 8e-74, Method: Composition-based stats. Identities = 82/264 (31%), Positives = 127/264 (48%), Gaps = 9/264 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 D L V G + D L + + + K + I+G +DF Sbjct: 27 PRLDGEVLLSHVLGKDRIYLYTHYDQPLIQDELDAFRPLVQQRAKGHCVAAIIGEKDFMG 86 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + ++ PRP+TE L++ L K VRILD+ TG G + L+LL P Sbjct: 87 LTFKVNDKVLIPRPDTETLIEHVLG----TYPKDSNVRILDVCTGPGTILLSLLHYLPNA 142 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG---LFDVIVSNPPYIESVI 179 GVG++IS AL +A+ N +++R L+SD FS++ G FD+IVSNPPYI + Sbjct: 143 CGVGLEISTDALLVAEENGERFNLNDRVQFLESDMFSALAGNAEKFDLIVSNPPYIRTGD 202 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 L +V + +P I+L GG DGL YR +A +LN +G E+G++Q +V + Sbjct: 203 AKLLSQDVLN-EPHIALFGGEDGLEFYRILAKECRNYLNANGRVVFEVGFDQAEEVGALL 261 Query: 240 ESRK-LFLVNAFKDYGGNDRVLLF 262 + + D GG++RV+ Sbjct: 262 QETGQYSNIQFIADLGGHNRVVTA 285 >gi|52842547|ref|YP_096346.1| protein methyltransferase HemK [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|52629658|gb|AAU28399.1| protein methyltransferase HemK [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 287 Score = 281 bits (719), Expect = 8e-74, Method: Composition-based stats. Identities = 84/264 (31%), Positives = 131/264 (49%), Gaps = 7/264 (2%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 + ++ LC V + + PD+++ Q I + + I I G R+F+ Sbjct: 21 ETKLEAELLLCHVLNKNRAYLFAHPDALVSPEQIETYLQMIKQRAEGLPIAYITGQREFW 80 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 ++ L ++ + PR ETE LV+ AL I ++ V +LDLGTG+GA+ LAL KE P Sbjct: 81 SLSLKVTPNVLIPRHETERLVELALEL----IPDKENVSVLDLGTGSGAIALALAKERPL 136 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIV 180 + D S +ALE+A+ NA T G+ + S WF+++ + IVSNPPYI Sbjct: 137 WHIDACDFSKEALELARYNAKTLGL-NNINFCHSYWFNNLPLKQYHAIVSNPPYIAENDP 195 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 +VR F+P +L DGL+ + I +L DGL VE G+ QK ++ I Sbjct: 196 HLKHGDVR-FEPTSALVSSQDGLADLQYIIQHSYEYLLPDGLLLVEHGFEQKNEISAILN 254 Query: 241 SRKLFLVNAFKDYGGNDRVLLFCR 264 ++ ++D G+DRV R Sbjct: 255 QLGYKNIHCWQDLQGHDRVSGGQR 278 >gi|254787711|ref|YP_003075140.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Teredinibacter turnerae T7901] gi|237685052|gb|ACR12316.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Teredinibacter turnerae T7901] Length = 277 Score = 281 bits (719), Expect = 8e-74, Method: Composition-based stats. Identities = 89/262 (33%), Positives = 130/262 (49%), Gaps = 9/262 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A D+ L V G S + P+ L + ++ R E + ILG R+F++ Sbjct: 21 ARLDTELLLAAVLGKSRTWLFTWPEYNLSEEEQARFAEFFARRRAGEPVAYILGEREFWS 80 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + + + T PRP+TELLV + +P+ R+LDLGTGTGA+ LAL E Sbjct: 81 LPFFVDASTLIPRPDTELLVSCIVDLPIPK------QRVLDLGTGTGAIALALASELSDA 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVD 181 V VD S +A+++A N G + + LQSDW+S++ + FDVIV+NPPYI+ Sbjct: 135 VIVAVDKSPEAVKLALRNQARLGFT-NVEILQSDWYSALGDQHFDVIVANPPYIDEKDTH 193 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+PR +L GL+ R I HLN G +E G+ Q V I Sbjct: 194 LGRGDVR-FEPRSALVAADKGLADIRHIIVHAVEHLNDGGTLLIEHGWQQDERVAEILAG 252 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 + + F+D GGN+R L Sbjct: 253 KGFLEIRTFQDLGGNNRATLGR 274 >gi|88192213|pdb|2B3T|A Chain A, Molecular Basis For Bacterial Class 1 Release Factor Methylation By Prmc Length = 276 Score = 281 bits (719), Expect = 8e-74, Method: Composition-based stats. Identities = 90/262 (34%), Positives = 126/262 (48%), Gaps = 8/262 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 RD+ L VTG ++ ++ L D Q L + R E I + G R+F++ Sbjct: 20 PRRDAEILLEHVTGRGRTFILAFGETQLTDEQCQQLDALLTRRRDGEPIAHLTGVREFWS 79 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +S T PRP+TE LV+ ALA RILDLGTGTGA+ LAL E P Sbjct: 80 LPLFVSPATLIPRPDTECLVEQALARL-----PEQPCRILDLGTGTGAIALALASERPDC 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181 + + VD A+ +A+ NA + LQSDWFS++ G F +IVSNPPYI+ Sbjct: 135 EIIAVDRMPDAVSLAQRNAQHLAIK-NIHILQSDWFSALAGQQFAMIVSNPPYIDEQDPH 193 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P +L G++ I + L G +E G+ Q V + F Sbjct: 194 LQQGDVR-FEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFIL 252 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 V +DYG N+RV L Sbjct: 253 AGYHDVETCRDYGDNERVTLGR 274 >gi|303250477|ref|ZP_07336674.1| HemK-like protein [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307251518|ref|ZP_07533425.1| hypothetical protein appser6_420 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|302650465|gb|EFL80624.1| HemK-like protein [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306860982|gb|EFM92988.1| hypothetical protein appser6_420 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] Length = 290 Score = 281 bits (719), Expect = 8e-74, Method: Composition-based stats. Identities = 93/266 (34%), Positives = 147/266 (55%), Gaps = 4/266 (1%) Query: 1 MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60 + D++ L VT + + ++ L + L + R L+ E + ILG ++F Sbjct: 24 LNPKTDANLLLQAVTKRTKSAIFAFGETALHQTELAELAQLLARRLQGEPMAYILGEKEF 83 Query: 61 YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120 +++ L +S T PRP+TE LV+ AL + R+E + ++ILDLGTGTGA+ LAL E Sbjct: 84 WSLPLKVSPHTLIPRPDTERLVEVALDWVYKRLESQQTLQILDLGTGTGAIALALASELG 143 Query: 121 F-FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESV 178 + +GVD +A+ +A++N G E LQSDWFS++E FD+IVSNPPYI+ Sbjct: 144 DKAQIIGVDFKPEAVTLAETNRQNLGF-ENVRFLQSDWFSALENRQFDLIVSNPPYIDKQ 202 Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238 + +VR F+P +L +GLS + I + +L +G +E G+ Q V +I Sbjct: 203 DKNLQYGDVR-FEPLSALVAEQNGLSDLQKIIENAPLYLLDNGALMLEHGWQQAQAVQQI 261 Query: 239 FESRKLFLVNAFKDYGGNDRVLLFCR 264 F+ + + +F+DYGGNDR+ R Sbjct: 262 FKQYQWDEIESFQDYGGNDRLTKAVR 287 >gi|110805217|ref|YP_688737.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Shigella flexneri 5 str. 8401] gi|110614765|gb|ABF03432.1| possible protoporphyrinogen oxidase [Shigella flexneri 5 str. 8401] Length = 277 Score = 281 bits (719), Expect = 9e-74, Method: Composition-based stats. Identities = 90/262 (34%), Positives = 125/262 (47%), Gaps = 8/262 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 RD+ L VTG ++ ++ L D Q L + R E I + G R+F++ Sbjct: 20 PRRDAEILLEHVTGRGRTFILAFGETQLTDEQCQQLDALLTRRRDGEPIAHLTGVREFWS 79 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +S T PRP+TE LV+ ALA RILDLGTGTGA+ LAL E P Sbjct: 80 LPLFVSPATLIPRPDTECLVEQALARL-----PEQPCRILDLGTGTGAIALALASERPDC 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181 + + VD A+ +A+ NA + LQSDWFS++ G F +IVSNPPYI+ Sbjct: 135 EIIAVDRMPDAVSLAQRNAQHLAIK-NIHILQSDWFSALAGQQFAMIVSNPPYIDEQDPH 193 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P +L G++ I L G +E G+ Q V + F Sbjct: 194 LQQGDVR-FEPLTALVAADSGMADIVHIIQQSRNALVSGGFLLLEHGWQQGEAVRQAFIL 252 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 V +DYG N+RV L Sbjct: 253 AGYHDVETCRDYGDNERVTLGR 274 >gi|260438935|ref|ZP_05792751.1| protein-(glutamine-N5) methyltransferase [Butyrivibrio crossotus DSM 2876] gi|292808586|gb|EFF67791.1| protein-(glutamine-N5) methyltransferase [Butyrivibrio crossotus DSM 2876] Length = 276 Score = 281 bits (719), Expect = 9e-74, Method: Composition-based stats. Identities = 80/263 (30%), Positives = 139/263 (52%), Gaps = 8/263 (3%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 +A D+ G++ ++D ++ + F + I + L H + ILG F Sbjct: 21 EAGNDAWLLFSEAFGMTRTDYLIDKNAECNAGHIPFFDSCIEKRLAHIPVQYILGKAYFM 80 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 ++++ PR +TE+LV L ++ +D +ILD+ TG+G + ++L Sbjct: 81 GYEFEVNNNVLIPRFDTEVLVSEVLKYT------QDDFKILDMCTGSGCIAISLSL-LSG 133 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181 + GVDIS KAL +A N V N +++ ++S+ F +++G F++IVSNPPYI + + Sbjct: 134 AEVTGVDISEKALAVADYNKVINK-ADKVTFVKSNMFENIDGAFNLIVSNPPYIPTKDIF 192 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 L EV++ +P ++L+G DGL YR +A+ +++L +G +EIGYNQ DV + Sbjct: 193 ELEHEVKNEEPMLALNGHDDGLFFYRILAEESAKYLRHNGGIFMEIGYNQAEDVRNLLIK 252 Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264 ++ KD G DRV+ R Sbjct: 253 NNFTDISVIKDLAGLDRVVCGWR 275 >gi|254226891|ref|ZP_04920459.1| hemK protein [Vibrio cholerae V51] gi|125620573|gb|EAZ48939.1| hemK protein [Vibrio cholerae V51] Length = 286 Score = 280 bits (718), Expect = 1e-73, Method: Composition-based stats. Identities = 88/263 (33%), Positives = 124/263 (47%), Gaps = 9/263 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 D+ LC V ++ PD L+ L + R E + ILG R+F++ Sbjct: 24 PALDAAVLLCHVLAKPRSYLLTWPDKTLEKPTLASLELLLARRRAGEPMAYILGEREFWS 83 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +S T PRP+TE LV+ AL + +LDLGTGTGA+ LAL E P Sbjct: 84 LPLKVSPSTLIPRPDTERLVELALDKAALID-----GELLDLGTGTGAIALALASELPTR 138 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIV 180 + G+D+ +A E+A+ NA + LQ WFS + F +IVSNPPYIE Sbjct: 139 QVTGIDLRPEAAELARENATRLAI-HNAQFLQGSWFSPLADGTKFALIVSNPPYIEENDP 197 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 +VR F+P+ +L +GL+ R I+ L G E GY+Q V V I Sbjct: 198 HLSLGDVR-FEPKSALVAAENGLADIRHISTHAPHFLLDGGWLLFEHGYDQGVAVRTILR 256 Query: 241 SRKLFLVNAFKDYGGNDRVLLFC 263 + +DY G+DRV L Sbjct: 257 DLGYQNIITEQDYAGHDRVTLGQ 279 >gi|227824240|ref|ZP_03989072.1| modification methylase [Acidaminococcus sp. D21] gi|226904739|gb|EEH90657.1| modification methylase [Acidaminococcus sp. D21] Length = 298 Score = 280 bits (718), Expect = 1e-73, Method: Composition-based stats. Identities = 91/264 (34%), Positives = 135/264 (51%), Gaps = 8/264 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 D+ LC V G+ + D L+ + ++R K E + ILG + F + Sbjct: 27 PRLDAELLLCAVLGMRRIDLYTHFDQPLEKEELAAYRGYVMRRAKREPVAYILGEKGFLD 86 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 +++DT PRPETELLV+ LA + + IL+LG G+GA+ ++LL + Sbjct: 87 YTFAVTADTLIPRPETELLVEKILA-----VTADGPLDILELGVGSGAILISLLLKRKEA 141 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIV 180 +G+GVDIS A+ +A+ NA GV++R + + SD F V FD+IVSNPPYI + Sbjct: 142 QGLGVDISEGAVAVARKNAKNLGVTDRSEIIVSDLFEKVPEGRKFDLIVSNPPYIPKKDL 201 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 L EVR +P +LDGG DGL YR I +L +DGL + E+G + + Sbjct: 202 AGLSPEVRK-EPLGALDGGEDGLDFYRRIVREGMAYLKEDGLFAFEVGIGEGAAAADLLV 260 Query: 241 SRKLFLVNAFKDYGGNDRVLLFCR 264 F DY G DR++L + Sbjct: 261 QNGCGAARVFLDYAGIDRMVLAAK 284 >gi|313107326|ref|ZP_07793521.1| putative methyl transferase [Pseudomonas aeruginosa 39016] gi|310880023|gb|EFQ38617.1| putative methyl transferase [Pseudomonas aeruginosa 39016] Length = 276 Score = 280 bits (718), Expect = 1e-73, Method: Composition-based stats. Identities = 83/262 (31%), Positives = 127/262 (48%), Gaps = 8/262 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A D+ L G + P+ ++ + I R E + ILG + F++ Sbjct: 19 ARLDTELLLAAAMGKPRSFLRTWPERIVPREANERFDDWIARRRNGEPVAYILGHQGFWS 78 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L ++ T PRP+TELLV+ + +LDLGTGTGA+ LAL E P + Sbjct: 79 LDLEVAPHTLIPRPDTELLVE-----TALATLAAGTATVLDLGTGTGAIALALASERPLW 133 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181 VD +A+ +A+ N + E + +S WFS+++G F +IV NPPYI + Sbjct: 134 TVTAVDRVEEAVALAERNRQRL-LLENVEVRRSHWFSALDGRRFRMIVGNPPYIPASDPH 192 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P+ +L G DGL R I RHL +G +E GY+Q V + + Sbjct: 193 LSEGDVR-FEPKSALVAGSDGLDDIRQIVAQAPRHLLDEGWLLLEHGYDQGAAVRELLGA 251 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 R V+ +D GGN+R+ L Sbjct: 252 RGFAGVHTLRDLGGNERITLGQ 273 >gi|121727186|ref|ZP_01680353.1| hemK protein [Vibrio cholerae V52] gi|147674049|ref|YP_001217694.1| hemK protein [Vibrio cholerae O395] gi|262167527|ref|ZP_06035233.1| Polypeptide chain release factor methylase [Vibrio cholerae RC27] gi|121630431|gb|EAX62824.1| hemK protein [Vibrio cholerae V52] gi|146315932|gb|ABQ20471.1| hemK protein [Vibrio cholerae O395] gi|227014074|gb|ACP10284.1| hemK protein [Vibrio cholerae O395] gi|262024099|gb|EEY42794.1| Polypeptide chain release factor methylase [Vibrio cholerae RC27] Length = 286 Score = 280 bits (718), Expect = 1e-73, Method: Composition-based stats. Identities = 89/263 (33%), Positives = 126/263 (47%), Gaps = 9/263 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 D+ LC V ++ PD +L+ L + R E + ILG R+F++ Sbjct: 24 PALDAAVLLCHVLAKPRSYLLTWPDKILEKPTLASLELLLARRRAGEPMAYILGEREFWS 83 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +S T PRP+TE LV+ AL + +LDLGTGTGA+ LAL E P Sbjct: 84 LPLKVSPSTLIPRPDTERLVELALDKAALID-----GELLDLGTGTGAIALALASELPTR 138 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIV 180 + G+D+ +A E+A+ NA + Q WFS + F +IVSNPPYIE Sbjct: 139 QVTGIDLRPEAAELARENATRLAI-HNAQFFQGSWFSPLADGTKFALIVSNPPYIEENDP 197 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 +VR F+P+ +L +GL+ R I+ R L DG E GY+Q V V I Sbjct: 198 HLSLGDVR-FEPKSALVAAENGLADIRHISTHAPRFLLDDGWLLFEHGYDQGVAVRTIMS 256 Query: 241 SRKLFLVNAFKDYGGNDRVLLFC 263 + +DY G+DRV L Sbjct: 257 DLGYQNIMTEQDYAGHDRVTLGQ 279 >gi|15599859|ref|NP_253353.1| methyl transferase [Pseudomonas aeruginosa PAO1] gi|116052809|ref|YP_793126.1| putative methyl transferase [Pseudomonas aeruginosa UCBPP-PA14] gi|296391485|ref|ZP_06880960.1| putative methyl transferase [Pseudomonas aeruginosa PAb1] gi|9950919|gb|AAG08051.1|AE004880_7 probable methyl transferase [Pseudomonas aeruginosa PAO1] gi|115588030|gb|ABJ14045.1| putative methyl transferase [Pseudomonas aeruginosa UCBPP-PA14] Length = 276 Score = 280 bits (718), Expect = 1e-73, Method: Composition-based stats. Identities = 84/262 (32%), Positives = 128/262 (48%), Gaps = 8/262 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A D+ L G + P+ ++ + I R E + ILG + F++ Sbjct: 19 ARLDTELLLAAAMGKPRSFLRTWPERIVPREANERFDDWIARRRNGEPVAYILGHQGFWS 78 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L ++ T PRP+TELLV+ + D +LDLGTGTGA+ LAL E P + Sbjct: 79 LDLEVAPHTLIPRPDTELLVE-----TALATLAADTATVLDLGTGTGAIALALASERPLW 133 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181 VD +A+ +A+ N + E + +S WFS+++G F +IV NPPYI + Sbjct: 134 TVTAVDRVEEAVALAERNRQRL-LLENVEVRRSHWFSALDGRRFRMIVGNPPYIPASDPH 192 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P+ +L G DGL R I RHL +G +E GY+Q V + + Sbjct: 193 LSEGDVR-FEPKSALVAGSDGLDDIRQIVAQAPRHLLDEGWLLLEHGYDQGAAVRELLGA 251 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 R V+ +D GGN+R+ L Sbjct: 252 RGFAGVHTLRDLGGNERITLGQ 273 >gi|298485682|ref|ZP_07003761.1| modification methylase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298159708|gb|EFI00750.1| modification methylase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 277 Score = 280 bits (718), Expect = 1e-73, Method: Composition-based stats. Identities = 83/263 (31%), Positives = 125/263 (47%), Gaps = 7/263 (2%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A D L G + P+ ++ + R E + ILG + F+ Sbjct: 19 ARLDIELLLAAALGKPRSFLHTWPERIVSTEAALAFAGYLQRRRTGEPVAYILGQQGFWK 78 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L ++ T PRPETE+LV++AL + ++LDLGTGTGA+ LAL E + Sbjct: 79 LDLEVAPHTLIPRPETEMLVEAALELA----PAFAPAKVLDLGTGTGAIALALANERQQW 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181 K VD +A+ +A+ N + + L S WFS++EG FD+I+SNPPYI Sbjct: 135 KVTAVDRVPEAVALAERNRQRLQL-DNAHVLNSHWFSALEGRQFDLIISNPPYIADADPH 193 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P +L G DGL RTI HL+ DG +E GY+Q V + Sbjct: 194 LSAGDVR-FEPSSALTAGSDGLDDLRTIIADAPVHLSADGWLLLEHGYDQGPAVRELLIR 252 Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264 + +D G ++R+ C+ Sbjct: 253 HGFERIQTRRDLGEHERITFGCK 275 >gi|330988604|gb|EGH86707.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Pseudomonas syringae pv. lachrymans str. M301315] Length = 277 Score = 280 bits (718), Expect = 1e-73, Method: Composition-based stats. Identities = 83/263 (31%), Positives = 125/263 (47%), Gaps = 7/263 (2%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A D L G + P+ ++ + R E + ILG + F+ Sbjct: 19 ARLDIELLLAAALGKPRSFLHTWPERIVSTEAALAFAGYLQRRRTGEPVAYILGQQGFWK 78 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L ++ T PRPETE+LV++AL + ++LDLGTGTGA+ LAL E + Sbjct: 79 LDLEVAPHTLIPRPETEMLVEAALEL----VPAFAPAKVLDLGTGTGAIALALANERQQW 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181 K VD +A+ +A+ N + + L S WFS++EG FD+I+SNPPYI Sbjct: 135 KVTAVDRVPEAVALAERNRQRLQL-DNAQVLNSHWFSALEGQQFDLIISNPPYIADADPH 193 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P +L G DGL RTI HL+ DG +E GY+Q V + Sbjct: 194 LSAGDVR-FEPSSALTAGSDGLDDLRTIIADAPVHLSADGWLLLEHGYDQGPAVRELLIR 252 Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264 + +D G ++R+ C+ Sbjct: 253 HGFERIQTRRDLGEHERITFGCK 275 >gi|229522129|ref|ZP_04411546.1| methylase of polypeptide chain release factors [Vibrio cholerae TM 11079-80] gi|229341054|gb|EEO06059.1| methylase of polypeptide chain release factors [Vibrio cholerae TM 11079-80] Length = 286 Score = 280 bits (718), Expect = 1e-73, Method: Composition-based stats. Identities = 89/263 (33%), Positives = 126/263 (47%), Gaps = 9/263 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 D+ LC V ++ PD +L+ L + R E + ILG R+F++ Sbjct: 24 PALDAAVLLCHVLAKPRSYLLTWPDKILEKPTLASLELLLARRRAGEPMAYILGEREFWS 83 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +S T PRP+TE LV+ AL + +LDLGTGTGA+ LAL E P Sbjct: 84 LSLKVSPSTLIPRPDTERLVELALDKA-----ALIDGELLDLGTGTGAIALALASELPTR 138 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIV 180 + G+D+ +A E+A+ NA + LQ WFS + F +IVSNPPYIE Sbjct: 139 QVTGIDLRPEAAELARENATRLAI-HNAQFLQGSWFSPLADGTKFALIVSNPPYIEENDP 197 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 +VR F+P+ +L +GL+ R I+ R L G E GY+Q V V I Sbjct: 198 HLSLGDVR-FEPKSALVAAENGLADIRHISTHAPRFLLDGGWLLFEHGYDQGVAVRTILR 256 Query: 241 SRKLFLVNAFKDYGGNDRVLLFC 263 + +DY G+DRV L Sbjct: 257 DLGYQNIITEQDYAGHDRVTLGQ 279 >gi|221233855|ref|YP_002516291.1| peptide release factor-glutamine N5-methyltransferase [Caulobacter crescentus NA1000] gi|220963027|gb|ACL94383.1| peptide release factor-glutamine N5-methyltransferase [Caulobacter crescentus NA1000] Length = 289 Score = 280 bits (718), Expect = 1e-73, Method: Composition-based stats. Identities = 94/264 (35%), Positives = 145/264 (54%), Gaps = 5/264 (1%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 Q D+ L G++ +++ DP L Q L + + R + E + I+G + F+ Sbjct: 23 QPSIDARLMLEVAAGVTRTEIVTDPYRELSAEQIATLNDYLERRARREPVSHIIGRKGFW 82 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 + L ++ + PRPETE++VD L + +LDLG G+G + LA+L E P Sbjct: 83 KILLQVNKNVLTPRPETEVIVDEVLK----AFPEHMAFSMLDLGVGSGTILLAVLAERPA 138 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIV 180 KG+G+D S +AL +A+ NA ++ R L DW + + FD++VSNPPYI + ++ Sbjct: 139 AKGLGIDASSEALAVARENAANLDLNTRAALLHGDWTTGLGSDSFDLVVSNPPYIPTEVI 198 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 D L EVR +PR++LDGG DGL+ YR +A + R L GL +VEIGY+Q V +F Sbjct: 199 DTLEPEVRIHEPRLALDGGPDGLAAYRELAPEILRVLKPGGLFAVEIGYDQSQAVEALFR 258 Query: 241 SRKLFLVNAFKDYGGNDRVLLFCR 264 + V KD +DRV+L + Sbjct: 259 AAGATEVRTVKDLSTHDRVVLGVK 282 >gi|254293183|ref|YP_003059206.1| modification methylase, HemK family [Hirschia baltica ATCC 49814] gi|254041714|gb|ACT58509.1| modification methylase, HemK family [Hirschia baltica ATCC 49814] Length = 288 Score = 280 bits (718), Expect = 1e-73, Method: Composition-based stats. Identities = 96/260 (36%), Positives = 146/260 (56%), Gaps = 7/260 (2%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 LRD+ + G+S+ +I + ++ + + + I R L+ E I RI G R+F+ Sbjct: 27 PLRDARRLMELAAGMSTTDLIAEENTQIPLQISAKFSAFIQRRLEGEPISRIAGRREFWG 86 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + ++SD +PRP+TE LV+ L+ K D +LDLGTG+G + L++L E Sbjct: 87 LEFVITSDVLDPRPDTETLVELVLSEW-----KSDYKNVLDLGTGSGCILLSILSEKLSA 141 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIV 180 +G+G+D S KAL +A NA + +R S+WF ++ E FDVIVSNPPYI S + Sbjct: 142 QGLGLDQSEKALGVATKNAEKLELKQRARFQNSNWFDALTPEQKFDVIVSNPPYIPSADI 201 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 + L ++V+ +DP +LDGG DG YR I HLNK+GL + E+G+NQ V + E Sbjct: 202 EVLDIDVKKYDPLSALDGGEDGYDDYRHIISKAKVHLNKNGLIAFEVGFNQAEKVCELLE 261 Query: 241 SRKLFLVNAFKDYGGNDRVL 260 + K +N KD G R + Sbjct: 262 NEKFIHINVRKDLSGVKRCV 281 >gi|229513824|ref|ZP_04403286.1| methylase of polypeptide chain release factors [Vibrio cholerae TMA 21] gi|229349005|gb|EEO13962.1| methylase of polypeptide chain release factors [Vibrio cholerae TMA 21] Length = 286 Score = 280 bits (718), Expect = 1e-73, Method: Composition-based stats. Identities = 88/263 (33%), Positives = 125/263 (47%), Gaps = 9/263 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 D+ LC V ++ PD +L+ L + R E + ILG R+F++ Sbjct: 24 PALDAAVLLCHVLAKPRSYLLTWPDKILEKPTLASLELLLARRRAGEPMAYILGEREFWS 83 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +S T PRP+TE LV+ AL + +LDLGTGTGA+ LAL E P Sbjct: 84 LPLKVSPSTLIPRPDTERLVELALDKAALID-----GELLDLGTGTGAIALALASELPTR 138 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIV 180 + G+D+ +A E+A+ NA + LQ WFS + F +IVSNPPYIE Sbjct: 139 QVTGIDLRPEAAELARENATRLAI-HNAQFLQGSWFSPLADGTKFALIVSNPPYIEENDP 197 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 +VR F+P+ +L +GL+ R I+ L G E GY+Q V V I Sbjct: 198 HLSLGDVR-FEPKSALVAAENGLADIRHISTHAPHFLLDGGWLLFEHGYDQGVAVRTILR 256 Query: 241 SRKLFLVNAFKDYGGNDRVLLFC 263 + +DY G+DRV L Sbjct: 257 DLGYQNIITEQDYAGHDRVTLGQ 279 >gi|193064883|ref|ZP_03045960.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli E22] gi|194425825|ref|ZP_03058381.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli B171] gi|260843504|ref|YP_003221282.1| N5-glutamine methyltransferase [Escherichia coli O103:H2 str. 12009] gi|192927568|gb|EDV82185.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli E22] gi|194415880|gb|EDX32146.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli B171] gi|257758651|dbj|BAI30148.1| N5-glutamine methyltransferase [Escherichia coli O103:H2 str. 12009] gi|323162263|gb|EFZ48121.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli E128010] Length = 277 Score = 280 bits (718), Expect = 1e-73, Method: Composition-based stats. Identities = 90/262 (34%), Positives = 126/262 (48%), Gaps = 8/262 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 RD+ L VTG ++ ++ L D Q L + R E I + G R+F++ Sbjct: 20 PRRDAEILLEHVTGRGRTFILAFGETHLTDEQCQQLDALLTRRRDGEPIAHLTGVREFWS 79 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +S T PRP+TE LV+ ALA RILDLGTGTGA+ LAL E P Sbjct: 80 LPLFVSPATLIPRPDTECLVEQALARL-----PEQPCRILDLGTGTGAIALALASERPDC 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181 + + VD A+ +A+ NA + LQSDWFS++ G F +IVSNPPYI+ Sbjct: 135 EIIAVDRMPDAVSLAQRNAQHLAIK-NIHILQSDWFSALAGQQFAMIVSNPPYIDEQDPH 193 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P +L G++ I + L G +E G+ Q V + F Sbjct: 194 LQQGDVR-FEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFIL 252 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 V +DYG N+RV L Sbjct: 253 AGYHDVETCRDYGDNERVTLGR 274 >gi|289627917|ref|ZP_06460871.1| hemK protein [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|320325691|gb|EFW81752.1| hemK protein [Pseudomonas syringae pv. glycinea str. B076] gi|320327390|gb|EFW83404.1| hemK protein [Pseudomonas syringae pv. glycinea str. race 4] gi|330868899|gb|EGH03608.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 277 Score = 280 bits (718), Expect = 1e-73, Method: Composition-based stats. Identities = 83/263 (31%), Positives = 125/263 (47%), Gaps = 7/263 (2%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A D L G + P+ ++ + R E + ILG + F+ Sbjct: 19 ARLDIELLLAAALGKPRSFLHTWPERIVSTEAALAFAGYLQRRRTGEPVAYILGQQGFWK 78 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L ++ T PRPETE+LV++AL + ++LDLGTGTGA+ LAL E + Sbjct: 79 LDLEVAPHTLIPRPETEMLVEAALELA----PAFAPAKVLDLGTGTGAIALALANERQQW 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181 K VD +A+ +A+ N + + L S WFS++EG FD+I+SNPPYI Sbjct: 135 KVTAVDRVPEAVALAERNRQRLQL-DNAQVLNSHWFSALEGQQFDLIISNPPYIADADPH 193 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P +L G DGL RTI HL+ DG +E GY+Q V + Sbjct: 194 LSAGDVR-FEPSSALTAGSDGLDDLRTIIADAPVHLSADGWLLLEHGYDQGPAVRELLIR 252 Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264 + +D G ++R+ C+ Sbjct: 253 HGFERIQTRRDLGEHERITFGCK 275 >gi|32033820|ref|ZP_00134105.1| COG2890: Methylase of polypeptide chain release factors [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|126209496|ref|YP_001054721.1| HemK-like protein [Actinobacillus pleuropneumoniae L20] gi|303251819|ref|ZP_07337990.1| HemK-like protein [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|307244798|ref|ZP_07526897.1| hypothetical protein appser1_120 [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307249119|ref|ZP_07531126.1| hypothetical protein appser2_20810 [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|307249195|ref|ZP_07531192.1| hypothetical protein appser4_120 [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|307253752|ref|ZP_07535606.1| hypothetical protein appser9_120 [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307258209|ref|ZP_07539952.1| hypothetical protein appser11_120 [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|307260447|ref|ZP_07542142.1| hypothetical protein appser12_230 [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|126098288|gb|ABN75116.1| HemK-like protein [Actinobacillus pleuropneumoniae serovar 5b str. L20] gi|302649249|gb|EFL79434.1| HemK-like protein [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|306854243|gb|EFM86449.1| hypothetical protein appser1_120 [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306854407|gb|EFM86603.1| hypothetical protein appser2_20810 [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|306858719|gb|EFM90778.1| hypothetical protein appser4_120 [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306863236|gb|EFM95176.1| hypothetical protein appser9_120 [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306867669|gb|EFM99514.1| hypothetical protein appser11_120 [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306869850|gb|EFN01632.1| hypothetical protein appser12_230 [Actinobacillus pleuropneumoniae serovar 12 str. 1096] Length = 290 Score = 280 bits (718), Expect = 1e-73, Method: Composition-based stats. Identities = 93/266 (34%), Positives = 147/266 (55%), Gaps = 4/266 (1%) Query: 1 MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60 + D++ L VT + + ++ L + L + R L+ E + ILG ++F Sbjct: 24 LNPKTDANLLLQAVTKRTKSAIFAFGETALHQTELAELAQLLARRLQGEPMAYILGEKEF 83 Query: 61 YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120 +++ L +S T PRP+TE LV+ AL + R+E + ++ILDLGTGTGA+ LAL E Sbjct: 84 WSLPLKVSPHTLIPRPDTERLVEVALDWVYKRLESQQTLQILDLGTGTGAIALALASELG 143 Query: 121 F-FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESV 178 + +GVD +A+ +A++N G E LQSDWFS++E FD+IVSNPPYI+ Sbjct: 144 DKAQIIGVDFKPEAVTLAETNRQNLGF-ENVRFLQSDWFSALENRQFDLIVSNPPYIDKQ 202 Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238 + +VR F+P +L +GLS + I + +L +G +E G+ Q V +I Sbjct: 203 DKNLQYGDVR-FEPLSALVAEQNGLSDLQKIIENAPLYLLDNGALMLEHGWQQAQAVQQI 261 Query: 239 FESRKLFLVNAFKDYGGNDRVLLFCR 264 F+ + + +F+DYGGNDR+ R Sbjct: 262 FKQYQWDEIESFQDYGGNDRLTKAVR 287 >gi|330873306|gb|EGH07455.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 277 Score = 280 bits (718), Expect = 1e-73, Method: Composition-based stats. Identities = 84/263 (31%), Positives = 126/263 (47%), Gaps = 7/263 (2%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A D L G + P+ ++ + R E + ILG + F+ Sbjct: 19 ARLDIELLLAAALGKPRSFLHTWPERIVSTEAAVAFAGYLQRRRTGEPVAYILGQQGFWK 78 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L ++S T PRPETE+LV++AL + ++LDLGTGTGA+ LAL + + Sbjct: 79 LDLEVASHTLIPRPETEMLVEAALEL----VPAFAPAQVLDLGTGTGAIALALANDRQQW 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181 K VD +A+ +A+ N + + L S WFS++EG FD+I+SNPPYI Sbjct: 135 KVTAVDRVPEAVALAERNRQRLQL-DNAQVLNSHWFSALEGRQFDLIISNPPYIADADPH 193 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P +L G DGL RTI HLN DG +E GY+Q V + Sbjct: 194 LSAGDVR-FEPSSALTAGSDGLDDLRTIIADAPAHLNADGWLLLEHGYDQGPAVRELLIR 252 Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264 + +D G ++R+ C+ Sbjct: 253 HGFERIQTRRDLGEHERITFGCK 275 >gi|193069963|ref|ZP_03050911.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli E110019] gi|192956716|gb|EDV87171.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli E110019] Length = 277 Score = 280 bits (717), Expect = 1e-73, Method: Composition-based stats. Identities = 90/262 (34%), Positives = 125/262 (47%), Gaps = 8/262 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 RD+ L VTG ++ ++ L D Q L + R E I + G R+F++ Sbjct: 20 PRRDAEILLEHVTGRGRTFILAFGETQLTDEQCQQLDALLTRRRDGEPIAHLTGVREFWS 79 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +S T PRP+TE LV+ ALA RILDLGTGTGA+ LAL E P Sbjct: 80 LPLFVSPATLIPRPDTECLVEQALARL-----PEQPCRILDLGTGTGAIALALASERPDC 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181 + + VD A+ A+ NA + LQSDWFS++ G F +IVSNPPYI+ Sbjct: 135 EIIAVDRMPDAVSQAQRNAQHLAIK-NIHILQSDWFSALAGQQFAMIVSNPPYIDEQDPH 193 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P +L G++ I + L G +E G+ Q V + F Sbjct: 194 LQQGDVR-FEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFIL 252 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 V +DYG N+RV L Sbjct: 253 AGYHDVETCRDYGDNERVTLGR 274 >gi|218893761|ref|YP_002442630.1| putative methyl transferase [Pseudomonas aeruginosa LESB58] gi|254238596|ref|ZP_04931919.1| hypothetical protein PACG_04751 [Pseudomonas aeruginosa C3719] gi|126170527|gb|EAZ56038.1| hypothetical protein PACG_04751 [Pseudomonas aeruginosa C3719] gi|218773989|emb|CAW29804.1| probable methyl transferase [Pseudomonas aeruginosa LESB58] Length = 276 Score = 280 bits (717), Expect = 1e-73, Method: Composition-based stats. Identities = 83/262 (31%), Positives = 128/262 (48%), Gaps = 8/262 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A D+ L G + P+ ++ + I R E + ILG + F++ Sbjct: 19 ARLDTELLLAAAMGKPRSFLRTWPERIVPREANERFDDWIARRRNGEPVAYILGHQGFWS 78 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L ++ T PRP+TELLV+ + D +LDLGTGTGA+ LAL E P + Sbjct: 79 LDLEVAPHTLIPRPDTELLVE-----TALATLAADTATVLDLGTGTGAIALALASERPLW 133 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181 VD +A+ +A+ N + E + +S WFS+++G F +IV NPPYI + Sbjct: 134 TVTAVDRVEEAVALAERNRQRL-LLENVEVRRSHWFSALDGRRFRMIVGNPPYIPASDPH 192 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P+ +L G DGL R I +HL +G +E GY+Q V + + Sbjct: 193 LSEGDVR-FEPKSALVAGSDGLDDIRQIVAQAPQHLLDEGWLLLEHGYDQGAAVRELLGA 251 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 R V+ +D GGN+R+ L Sbjct: 252 RGFAGVHTLRDLGGNERITLGQ 273 >gi|316983955|gb|EFV62934.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Neisseria meningitidis H44/76] Length = 410 Score = 280 bits (717), Expect = 1e-73, Method: Composition-based stats. Identities = 89/263 (33%), Positives = 123/263 (46%), Gaps = 12/263 (4%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 ++ L V+ + Q++ + D R R L E + ILG R+FY Sbjct: 150 PKNEARMLLQYVSEYTRVQLLTRGGEEMPDEVRQRADRLAQRRLNGEPVAYILGVREFYG 209 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 R T++ PRPETE LV++ LA + R+ DLGTG+GAV + + E P Sbjct: 210 RRFTVNPSVLIPRPETEHLVEAVLARL------PENGRVWDLGTGSGAVAVTVALERPDA 263 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS---SVEGLFDVIVSNPPYIESVI 179 DIS ALE A+ NA G R + WF EG +D+IVSNPPYIE+ Sbjct: 264 FVRASDISPPALETARKNAADLGA--RVEFAHGSWFDTDMPSEGKWDIIVSNPPYIENGD 321 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 L ++R F+P+I+L DGLS RT+A G L + G +E G++Q V + Sbjct: 322 KHLLQGDLR-FEPQIALTDFSDGLSCIRTLAQGAPDRLAEGGFLLLEHGFDQGAAVRGVL 380 Query: 240 ESRKLFLVNAFKDYGGNDRVLLF 262 V D G DRV L Sbjct: 381 AENGFSGVETLPDLAGLDRVTLG 403 >gi|251792739|ref|YP_003007465.1| protein-(glutamine-N5) methyltransferase [Aggregatibacter aphrophilus NJ8700] gi|247534132|gb|ACS97378.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Aggregatibacter aphrophilus NJ8700] Length = 299 Score = 280 bits (717), Expect = 1e-73, Method: Composition-based stats. Identities = 94/270 (34%), Positives = 143/270 (52%), Gaps = 15/270 (5%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L T S ++ ++VL+ + LT + R LK E I +LG ++F+++ L Sbjct: 26 DALVLLQSATQKSRAFILAFGETVLEKKTLEKLTALLSRRLKGEPIAYLLGEKEFWSLPL 85 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEK----RDVVRILDLGTGTGAVCLALLKESPF 121 +S T PRP+TE+LV+ A+ ++ +++K RILDLGTGTGA+ LAL E F Sbjct: 86 AVSEKTLIPRPDTEVLVEKAVEIAIEKLQKCDQHSPSFRILDLGTGTGAIALALASELKF 145 Query: 122 F--------KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173 +GVD + +E+A++NA N + LQS WF +V G FDVIVSNPP Sbjct: 146 VAQKQQIQLDIIGVDFLPEIVELARTNAKKNQL--NVHFLQSHWFDNVRGQFDVIVSNPP 203 Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233 YI++ +VR F+P +L G + R I + ++L ++G +E G+ Q Sbjct: 204 YIDNNDEHLNQGDVR-FEPLSALVAEEGGYTDLRHIIEHAPQYLTENGYLLLEHGWQQGE 262 Query: 234 DVVRIFESRKLFLVNAFKDYGGNDRVLLFC 263 V IF+ V +DYG N+RV L Sbjct: 263 KVRSIFQMNLWQDVETCRDYGNNERVTLGR 292 >gi|304388692|ref|ZP_07370752.1| protein-(glutamine-N5) methyltransferase [Neisseria meningitidis ATCC 13091] gi|254672055|emb|CBA04658.1| heme biosynthesis protein [Neisseria meningitidis alpha275] gi|304337359|gb|EFM03533.1| protein-(glutamine-N5) methyltransferase [Neisseria meningitidis ATCC 13091] Length = 423 Score = 280 bits (717), Expect = 1e-73, Method: Composition-based stats. Identities = 88/263 (33%), Positives = 122/263 (46%), Gaps = 12/263 (4%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 ++ L V+ + Q++ + D R R L E + ILG R+FY Sbjct: 163 PKNEARMLLQYVSEYTRVQLLTRGGEEMPDEVRQRADRLAQRRLNGEPVAYILGVREFYG 222 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 R T++ PRPETE LV++ LA + R+ DLGTG+GAV + + E P Sbjct: 223 RRFTVNPSVLIPRPETEHLVEAVLARL------PENGRVWDLGTGSGAVAVTVALERPDA 276 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS---SVEGLFDVIVSNPPYIESVI 179 DIS ALE A+ NA G R + WF EG +D+IVSNPPYIE+ Sbjct: 277 FVRASDISPPALETARKNAADLGA--RVEFAHGSWFDTDMPSEGKWDIIVSNPPYIENGD 334 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 ++R F+P+I+L DGLS RT+A G L + G +E G++Q V + Sbjct: 335 KHLSQGDLR-FEPQIALTDFSDGLSCIRTLAQGAPDRLAEGGFLLLEHGFDQGAAVRGVL 393 Query: 240 ESRKLFLVNAFKDYGGNDRVLLF 262 V D G DRV L Sbjct: 394 AENGFSGVETLPDLAGLDRVTLG 416 >gi|153801641|ref|ZP_01956227.1| hemK protein [Vibrio cholerae MZO-3] gi|124122818|gb|EAY41561.1| hemK protein [Vibrio cholerae MZO-3] Length = 286 Score = 280 bits (717), Expect = 1e-73, Method: Composition-based stats. Identities = 89/263 (33%), Positives = 126/263 (47%), Gaps = 9/263 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 D+ LC V ++ PD +L+ L + R E + ILG R+F++ Sbjct: 24 PALDAAVLLCHVLAKPRSYLLTWPDKILEKPTLASLELLLARRRAGEPMAYILGEREFWS 83 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +S T PRP+TE LV+ AL + +LDLGTGTGA+ LAL E P Sbjct: 84 LPLKVSPSTLIPRPDTERLVELALDKAALID-----GELLDLGTGTGAIALALASELPTR 138 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIV 180 + G+D+ +A E+A+ NA + Q WFS + F +IVSNPPYIE Sbjct: 139 QVTGIDLRPEAAELARENATRLAI-HNAQFFQGSWFSPLADGTKFALIVSNPPYIEENDP 197 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 +VR F+P+ +L +GL+ R I+ R L DG E GY+Q V V I Sbjct: 198 HLSLGDVR-FEPKSALVAAENGLADIRHISTHAPRFLLDDGWLLFEHGYDQGVAVRTIMR 256 Query: 241 SRKLFLVNAFKDYGGNDRVLLFC 263 + +DY G+DRV L Sbjct: 257 DLGYQNIITEQDYAGHDRVTLGQ 279 >gi|209918453|ref|YP_002292537.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli SE11] gi|209911712|dbj|BAG76786.1| putative methyltransferase [Escherichia coli SE11] gi|324017538|gb|EGB86757.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS 117-3] Length = 277 Score = 280 bits (717), Expect = 1e-73, Method: Composition-based stats. Identities = 89/262 (33%), Positives = 125/262 (47%), Gaps = 8/262 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 RD+ L VTG ++ ++ L D Q L + R E I + G R+F++ Sbjct: 20 PRRDAEILLEHVTGRGRTFILAFGETQLTDEQCQQLDALLTRRRDGEPIAHLTGVREFWS 79 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +S T PRP+TE LV+ ALA RILDLGTGTGA+ LAL E P Sbjct: 80 LPLFVSPATLIPRPDTECLVEQALARL-----PEQPCRILDLGTGTGAIALALASERPDC 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181 + + VD A+ + + NA + LQSDWFS++ G F +IVSNPPYI+ Sbjct: 135 EIIAVDRMPDAVSLTQRNAQHLAIK-NIHILQSDWFSALAGQQFAMIVSNPPYIDEQDPH 193 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P +L G++ I + L G +E G+ Q V + F Sbjct: 194 LQQGDVR-FEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFIL 252 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 V +DYG N+RV L Sbjct: 253 AGYHDVETCRDYGDNERVTLGR 274 >gi|297582071|ref|ZP_06943990.1| hemK protein [Vibrio cholerae RC385] gi|297533766|gb|EFH72608.1| hemK protein [Vibrio cholerae RC385] Length = 286 Score = 280 bits (717), Expect = 1e-73, Method: Composition-based stats. Identities = 89/263 (33%), Positives = 125/263 (47%), Gaps = 9/263 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 D+ LC V ++ PD L+ L + R E + ILG R+F++ Sbjct: 24 PALDAAVLLCHVLAKPRSYLLTWPDKTLEKPTLASLELLLARRRAGEPMAYILGEREFWS 83 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +S T PRP+TE LV+ AL + +LDLGTGTGA+ LAL E P Sbjct: 84 LSLKVSPSTLIPRPDTERLVELALDKAALID-----GELLDLGTGTGAIALALASELPTR 138 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIV 180 + G+D+ +A E+A+ NA + LQ WFS + F +IVSNPPYIE Sbjct: 139 QVTGIDLRPEAAELARENATRLAIHNAL-FLQGSWFSPLADGTKFALIVSNPPYIEENDP 197 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 +VR F+P+ +L +GL+ R I+ R L G E GY+Q V V I Sbjct: 198 HLSLGDVR-FEPKSALVAEENGLADIRHISTHAPRFLLDGGWLLFEHGYDQGVAVRTILR 256 Query: 241 SRKLFLVNAFKDYGGNDRVLLFC 263 + +DY G+DRV L Sbjct: 257 DLGYQNIITEQDYAGHDRVTLGQ 279 >gi|297618445|ref|YP_003703604.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Syntrophothermus lipocalidus DSM 12680] gi|297146282|gb|ADI03039.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Syntrophothermus lipocalidus DSM 12680] Length = 296 Score = 280 bits (717), Expect = 1e-73, Method: Composition-based stats. Identities = 76/266 (28%), Positives = 137/266 (51%), Gaps = 7/266 (2%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 + ++ L V G+ + V+ ++ +R I R ++ E + + G ++F+ Sbjct: 25 EPRLEAELLLAYVLGIDRVGLYVNYYQPVNQDERSCYREIIKRRVQGEPVAYLTGKKEFF 84 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 ++ +S + PR ETE++V+ A+A + + D+GTG GA+ +AL P Sbjct: 85 SLEFDVSPEVLIPRAETEVMVEKAIAIGRGM---GGSLWVADVGTGCGAIAIALAVYLPN 141 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESV 178 + V +DIS A+E+A+ NA V +R D + D + + D++V+N PY+ + Sbjct: 142 ARIVAIDISSAAVELARKNARRYQVHDRIDFMVGDLLTPLGQDNAGLDIVVANLPYVPTN 201 Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238 + L LEV++F+PRI+LDGG DGL++YR + + L + G VEI +NQ ++ + Sbjct: 202 EWENLALEVKEFEPRIALDGGADGLAYYRRLMPQARQCLREGGYILVEIAWNQGPAMLSL 261 Query: 239 FESRKLFLVNAFKDYGGNDRVLLFCR 264 V +D G DRV++ + Sbjct: 262 M-QHFFDEVEVGQDLAGRDRVVVGRK 286 >gi|152980147|ref|YP_001351901.1| methylase of polypeptide chain release factors [Janthinobacterium sp. Marseille] gi|151280224|gb|ABR88634.1| methylase of polypeptide chain release factors [Janthinobacterium sp. Marseille] Length = 280 Score = 280 bits (717), Expect = 1e-73, Method: Composition-based stats. Identities = 87/258 (33%), Positives = 134/258 (51%), Gaps = 10/258 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A ++ L VT LS Q+I + L + L+ R L E I + G R+F+ Sbjct: 24 AQLEARILLGYVTRLSRVQLITQAERALTAEEAQQLSQLFARRLAGEPIAYLTGEREFFG 83 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + +S PRP+TELLV+ AL + P+ R+LD+GTG+GA+ +A+ P Sbjct: 84 LSFDVSPAVLIPRPDTELLVELALHYLPPQ------GRVLDMGTGSGAIAVAIAHARPDA 137 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVD 181 +D+S +AL IA+ NA N + + L+SDWFS+V E FD+IVSNPPYI + Sbjct: 138 FVTALDVSAEALAIAEGNARKN--QVQVNFLRSDWFSAVKEQRFDLIVSNPPYIVAGDPH 195 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 ++R F+P +L +GLS +TI +R+L +E GY+Q V + + Sbjct: 196 LSEGDLR-FEPVDALTDHANGLSDLQTITRDAARYLAPAAWLLMEHGYDQAAAVRDVLAT 254 Query: 242 RKLFLVNAFKDYGGNDRV 259 V +++D G +RV Sbjct: 255 HGFTEVQSWRDLAGIERV 272 >gi|107099669|ref|ZP_01363587.1| hypothetical protein PaerPA_01000687 [Pseudomonas aeruginosa PACS2] Length = 276 Score = 280 bits (717), Expect = 1e-73, Method: Composition-based stats. Identities = 83/262 (31%), Positives = 128/262 (48%), Gaps = 8/262 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A D+ L G + P+ ++ + I R E + ILG + F++ Sbjct: 19 ARLDTELLLAAAMGKPRSFLRTWPERIVPREANERFDDWIARRRNGEPVAYILGHQGFWS 78 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L ++ T PRP+TELLV+ + D +LDLGTGTGA+ LAL E P + Sbjct: 79 LDLEVAPHTLIPRPDTELLVE-----TALATLAADTATVLDLGTGTGAIALALASERPLW 133 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181 VD +A+ +A+ N + E + +S WFS+++G F +IV NPPYI + Sbjct: 134 TVTAVDRVEEAVALAERNRQRL-LLENVEVRRSHWFSALDGRRFRMIVGNPPYIPASDPH 192 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P+ +L G DGL R I +HL +G +E GY+Q V + + Sbjct: 193 LSEGDVR-FEPKSALVAGSDGLDDIRQIVAQAPQHLLDEGWLLLEHGYDQGAAVRELLGA 251 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 R V+ +D GGN+R+ L Sbjct: 252 RGFAGVHTLRDLGGNERITLGQ 273 >gi|150397699|ref|YP_001328166.1| HemK family modification methylase [Sinorhizobium medicae WSM419] gi|150029214|gb|ABR61331.1| modification methylase, HemK family [Sinorhizobium medicae WSM419] Length = 292 Score = 280 bits (717), Expect = 1e-73, Method: Composition-based stats. Identities = 112/260 (43%), Positives = 158/260 (60%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A D+ + + L+ ++ + D + A+ R HE ++RILG R+F Sbjct: 24 AALDARHLVSGLLELALAALVTRGREPVSDEDAARIRAAVERRAAHEPVYRILGEREFSG 83 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 ++L LS +T EPRP+TE +V+ + + K+ RI+DLGTGTGA+CLALL Sbjct: 84 LKLKLSKETLEPRPDTETMVECLIPHARRIALKKGSCRIVDLGTGTGAICLALLDAVLDA 143 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182 +G+G DIS AL A NA NG++ RF+TL+S+W +V G FD+IVSNPPYI S ++ Sbjct: 144 RGLGTDISEDALATACENARRNGLAGRFETLRSNWLEAVNGRFDIIVSNPPYIRSNVIPD 203 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 L EV+ DP +LDGG DGL+ YR IA RHL DG+ +EIG++QK V +FE+ Sbjct: 204 LEPEVKFHDPAAALDGGEDGLNAYRAIASDAGRHLEPDGVIGLEIGFDQKQAVTALFEAH 263 Query: 243 KLFLVNAFKDYGGNDRVLLF 262 ++ A KD GGNDRVL+F Sbjct: 264 GFHMLYAAKDLGGNDRVLVF 283 >gi|240950072|ref|ZP_04754374.1| HemK-like protein/protein-glutamine N-methyl transferase [Actinobacillus minor NM305] gi|240295447|gb|EER46202.1| HemK-like protein/protein-glutamine N-methyl transferase [Actinobacillus minor NM305] Length = 289 Score = 280 bits (717), Expect = 1e-73, Method: Composition-based stats. Identities = 94/266 (35%), Positives = 143/266 (53%), Gaps = 4/266 (1%) Query: 1 MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60 + D++ L VT S + ++VL + + L + R K E I ILG ++F Sbjct: 24 LNVKVDANILLQAVTKRSKSAIFAFSETVLSEAELIELNALLARRAKGEPIAYILGEKEF 83 Query: 61 YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES- 119 +++ L +S+ T PRP+TE LV+ AL ++ R+ ++ ++ILDLGTGTGA+ LAL E Sbjct: 84 WSLPLAVSTATLIPRPDTECLVEVALEWAYKRLNSQETLQILDLGTGTGAIALALASELG 143 Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESV 178 +G+D +A+E+A+ N G LQSDWFS +E FD+IVSNPPYI+ Sbjct: 144 KKADIIGLDKQSEAVELAEKNRQKLGFK-NVRFLQSDWFSVLENHCFDLIVSNPPYIDKD 202 Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238 + +VR F+P +L GLS + I + +L K G +E G+ Q +V +I Sbjct: 203 DENLTKGDVR-FEPLTALVAEQHGLSDLQKIIENAPLYLAKQGALMLEHGWQQAAEVQQI 261 Query: 239 FESRKLFLVNAFKDYGGNDRVLLFCR 264 F + + FKDYG DR+ R Sbjct: 262 FRQNQWDKIETFKDYGNQDRITKAER 287 >gi|213967223|ref|ZP_03395372.1| hemK protein [Pseudomonas syringae pv. tomato T1] gi|301381041|ref|ZP_07229459.1| hemK protein [Pseudomonas syringae pv. tomato Max13] gi|302060377|ref|ZP_07251918.1| hemK protein [Pseudomonas syringae pv. tomato K40] gi|302134867|ref|ZP_07260857.1| hemK protein [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213928065|gb|EEB61611.1| hemK protein [Pseudomonas syringae pv. tomato T1] gi|331018121|gb|EGH98177.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 277 Score = 280 bits (717), Expect = 1e-73, Method: Composition-based stats. Identities = 83/263 (31%), Positives = 125/263 (47%), Gaps = 7/263 (2%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A D L G + P+ ++ + R E + ILG + F+ Sbjct: 19 ARLDIELLLAAALGKPRSFLHTWPERIVSTEAAVAFAGYLQRRRTGEPVAYILGQQGFWK 78 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L ++ T PRPETE+LV++AL + ++LDLGTGTGA+ LAL + + Sbjct: 79 LDLEVAPHTLIPRPETEMLVEAALEL----VPAFAPAQVLDLGTGTGAIALALANDRQQW 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181 K VD +A+ +A+ N + + L S WFS++EG FD+I+SNPPYI Sbjct: 135 KVTAVDRVPEAVALAERNRQRLQL-DNAQVLNSHWFSALEGRQFDLIISNPPYIADADPH 193 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P +L G DGL RTI HLN DG +E GY+Q V + Sbjct: 194 LSAGDVR-FEPSSALTAGADGLDDLRTIIADAQAHLNADGWLLLEHGYDQGPAVRELLTR 252 Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264 + +D G ++R+ C+ Sbjct: 253 HGFERIQTRRDLGEHERITFGCK 275 >gi|254291409|ref|ZP_04962202.1| hemK protein [Vibrio cholerae AM-19226] gi|150422739|gb|EDN14693.1| hemK protein [Vibrio cholerae AM-19226] Length = 286 Score = 280 bits (717), Expect = 1e-73, Method: Composition-based stats. Identities = 88/263 (33%), Positives = 125/263 (47%), Gaps = 9/263 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 D+ LC V ++ PD +L+ L + R E + ILG R+F++ Sbjct: 24 PALDAALLLCHVLAKPRSYLLTWPDKILEKPTLASLELLLARRRAGEPMAYILGEREFWS 83 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +S T PRP+TE LV+ AL + +LDLGTGTGA+ LAL E P Sbjct: 84 LSLKVSPSTLIPRPDTERLVELALDKAALID-----GELLDLGTGTGAIALALASELPTR 138 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIV 180 + G+D+ +A E+A+ NA + LQ WFS + F +IVSNPPYIE Sbjct: 139 QVTGIDLRPEAAELARENATRLAI-HNAQFLQGSWFSPLADGTKFALIVSNPPYIEENDP 197 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 +VR F+P+ +L +GL+ R I+ L G E GY+Q V V I Sbjct: 198 HLSLGDVR-FEPKSALVAAENGLADIRHISTHAPHFLLDGGWLLFEHGYDQGVAVRTILR 256 Query: 241 SRKLFLVNAFKDYGGNDRVLLFC 263 + +DY G+DRV L Sbjct: 257 DLGYQNIITEQDYAGHDRVTLGQ 279 >gi|254362306|ref|ZP_04978418.1| protein-glutamine N-methyltransferase [Mannheimia haemolytica PHL213] gi|153093886|gb|EDN74814.1| protein-glutamine N-methyltransferase [Mannheimia haemolytica PHL213] Length = 288 Score = 280 bits (717), Expect = 1e-73, Method: Composition-based stats. Identities = 93/262 (35%), Positives = 143/262 (54%), Gaps = 4/262 (1%) Query: 1 MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60 + A D++ L VT S + +++L + + L + R K E + ILG+R+F Sbjct: 24 LNAKFDANLLLQAVTKRSKSAIFAFSETLLSESELAELAEKLARRAKGEPMAYILGYREF 83 Query: 61 YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES- 119 +++ L +S T PRP+TE LV+ AL ++ R+ + +++ILDLGTGTGA+ LAL E Sbjct: 84 WSLPLKVSPATLIPRPDTERLVELALEYANKRLGNQKMLQILDLGTGTGAIALALASELG 143 Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESV 178 + +GVD +A+++A+ N G+ + LQSDWFSS+ FD+IVSNPPYI+ Sbjct: 144 EKAQIIGVDFQNEAVQLAEENRRNLGL-NQVTFLQSDWFSSLANQQFDLIVSNPPYIDES 202 Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238 + +VR F+P +L GLS + I + HL G +E G+ Q V + Sbjct: 203 DENLTVGDVR-FEPLTALVADNKGLSDLQKIIENAPLHLKPQGALMLEHGWKQGNLVRDL 261 Query: 239 FESRKLFLVNAFKDYGGNDRVL 260 F+ V +DY GNDRV Sbjct: 262 FDLHLWEQVETAQDYAGNDRVT 283 >gi|152970780|ref|YP_001335889.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|150955629|gb|ABR77659.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] Length = 283 Score = 280 bits (717), Expect = 1e-73, Method: Composition-based stats. Identities = 89/262 (33%), Positives = 130/262 (49%), Gaps = 8/262 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 RD+ L VTG + ++ ++ L + L +VR + E I ++G R+F++ Sbjct: 21 PRRDAEILLGYVTGRARTWILAFGETTLSADEAAKLEALLVRRQRGEPIAHLVGQREFWS 80 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +S T PRP+TE LV+ ALA RILDLGTGTGA+ LAL E P Sbjct: 81 LPLFVSPATLIPRPDTECLVEQALARL-----PTAPCRILDLGTGTGAIALALASERPDC 135 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181 + VD+ A+ +A NA ++ QSDWFS++ G F IVSNPPYI++ Sbjct: 136 EVTAVDVMPDAVALALRNAEHLSIA-NVTISQSDWFSALAGQRFATIVSNPPYIDAADPH 194 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P +L G GL+ I ++L G +E G+ Q V +F Sbjct: 195 LAEGDVR-FEPLTALVAGDQGLADLAHIIREGRQYLQPGGWMLLEHGWTQGEAVRALFRE 253 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 V +DYG N+R+ L Sbjct: 254 AGYLDVATCRDYGDNERLTLGR 275 >gi|325133243|gb|EGC55909.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Neisseria meningitidis M13399] gi|325139388|gb|EGC61928.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Neisseria meningitidis CU385] gi|325201113|gb|ADY96568.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Neisseria meningitidis H44/76] Length = 273 Score = 280 bits (717), Expect = 2e-73, Method: Composition-based stats. Identities = 89/263 (33%), Positives = 123/263 (46%), Gaps = 12/263 (4%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 ++ L V+ + Q++ + D R R L E + ILG R+FY Sbjct: 13 PKNEARMLLQYVSEYTRVQLLTRGGEEMPDEVRQRADRLAQRRLNGEPVAYILGVREFYG 72 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 R T++ PRPETE LV++ LA + R+ DLGTG+GAV + + E P Sbjct: 73 RRFTVNPSVLIPRPETEHLVEAVLARL------PENGRVWDLGTGSGAVAVTVALERPDA 126 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS---SVEGLFDVIVSNPPYIESVI 179 DIS ALE A+ NA G R + WF EG +D+IVSNPPYIE+ Sbjct: 127 FVRASDISPPALETARKNAADLGA--RVEFAHGSWFDTDMPSEGKWDIIVSNPPYIENGD 184 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 L ++R F+P+I+L DGLS RT+A G L + G +E G++Q V + Sbjct: 185 KHLLQGDLR-FEPQIALTDFSDGLSCIRTLAQGAPDRLAEGGFLLLEHGFDQGAAVRGVL 243 Query: 240 ESRKLFLVNAFKDYGGNDRVLLF 262 V D G DRV L Sbjct: 244 AENGFSGVETLPDLAGLDRVTLG 266 >gi|110803251|ref|YP_699477.1| HemK family modification methylase [Clostridium perfringens SM101] gi|110683752|gb|ABG87122.1| modification methylase, HemK family [Clostridium perfringens SM101] Length = 587 Score = 280 bits (717), Expect = 2e-73, Method: Composition-based stats. Identities = 69/263 (26%), Positives = 125/263 (47%), Gaps = 7/263 (2%) Query: 4 LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63 + D+ L ++ +I + + + N + + + ILG +F + Sbjct: 324 ILDTQLLLGKILEKDKIWLITNKNEEVKKSDEIHFLNLLEKRKSKMPMQYILGTCEFMGL 383 Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 + PR +TE++V+ L I++ + + DL G+GA+ L+L Sbjct: 384 DFYVEEGVLIPRGDTEIIVEEVLN----NIDEDAEINVCDLCCGSGAIGLSLANYRKNII 439 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIV 180 VDI ++ + N +S+R ++SD S V +D++VSNPPYI + ++ Sbjct: 440 VDLVDIDDIPEKVTRKNIRELELSKRCGFIKSDLLSEVIKKGNKYDILVSNPPYIRTEVI 499 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 + L +V+D++P ++LDGG DGL YR I D L ++G+ + EIG++Q DV + Sbjct: 500 NTLMKDVKDYEPHLALDGGEDGLIFYRRIIDESLEVLKENGILAFEIGHDQGEDVKNLMI 559 Query: 241 SRKLFLVNAFKDYGGNDRVLLFC 263 + + V KD G DR ++ Sbjct: 560 EKGYYDVKVIKDLAGLDRCVIGR 582 >gi|254671226|emb|CBA08440.1| heme biosynthesis protein [Neisseria meningitidis alpha153] Length = 423 Score = 280 bits (717), Expect = 2e-73, Method: Composition-based stats. Identities = 88/263 (33%), Positives = 122/263 (46%), Gaps = 12/263 (4%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 ++ L V+ + Q++ + D R R L E + ILG R+FY Sbjct: 163 PKNEARMLLQYVSEYTRVQLLTRGGEEMPDEVRQRADRLAQRRLNGEPVAYILGVREFYG 222 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 R T++ PRPETE LV++ LA + R+ DLGTG+GAV + + E P Sbjct: 223 RRFTVNPSVLIPRPETEHLVEAVLARL------PENGRVWDLGTGSGAVAVTVALERPDA 276 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS---SVEGLFDVIVSNPPYIESVI 179 DIS ALE A+ NA G R + WF EG +D+IVSNPPYIE+ Sbjct: 277 FVRASDISPPALETARKNAADLGA--RVEFAHGSWFDTDMPSEGKWDIIVSNPPYIENGD 334 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 ++R F+P+I+L DGLS RT+A G L + G +E G++Q V + Sbjct: 335 KHLSQGDLR-FEPQIALTDFSDGLSCIRTLAQGAPDRLAEGGFLLLEHGFDQGAAVRGVL 393 Query: 240 ESRKLFLVNAFKDYGGNDRVLLF 262 V D G DRV L Sbjct: 394 AENGFSGVETLPDLAGLDRVTLG 416 >gi|90412791|ref|ZP_01220791.1| putative HemK protein, Methylase of polypeptide chain release factors [Photobacterium profundum 3TCK] gi|90326150|gb|EAS42577.1| putative HemK protein, Methylase of polypeptide chain release factors [Photobacterium profundum 3TCK] Length = 282 Score = 280 bits (717), Expect = 2e-73, Method: Composition-based stats. Identities = 83/263 (31%), Positives = 128/263 (48%), Gaps = 9/263 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 D+ LC V ++ P+ D Q + R + E + ILG R+F++ Sbjct: 24 PQLDAAVLLCHVLDKPRSYLLTWPEKEPSDEQFTLFEALLARRITGEPVAYILGEREFWS 83 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +S T PRP+TE LV+ AL +LDLGTGTGA+ LA+ E Sbjct: 84 LPLKVSPFTLIPRPDTERLVEVALEKI-----PTQACTVLDLGTGTGAIALAIASERNDA 138 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIV 180 + G+D+ +A E+A N + L W++ + + LF VIVSNPPYI++ Sbjct: 139 QVTGIDLRPEAAELAAENGQRLNIQ-NARFLAGSWYTPLASDELFAVIVSNPPYIDAADP 197 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 + +VR F+P+ +L +GL+ + I++ +HL G +E G+ Q V I + Sbjct: 198 HLVLGDVR-FEPKTALIADDNGLADIQIISEQGRQHLQTGGWLLMEHGFEQGEAVRHILQ 256 Query: 241 SRKLFLVNAFKDYGGNDRVLLFC 263 LV+ +DY G DRV L C Sbjct: 257 ELGYHLVSTAQDYAGLDRVTLGC 279 >gi|71735390|ref|YP_273269.1| hemK protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|71555943|gb|AAZ35154.1| hemK protein [Pseudomonas syringae pv. phaseolicola 1448A] Length = 277 Score = 280 bits (717), Expect = 2e-73, Method: Composition-based stats. Identities = 82/263 (31%), Positives = 125/263 (47%), Gaps = 7/263 (2%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A D L G + P+ ++ + R E + ILG + F+ Sbjct: 19 ARLDIELLLAAALGKPRSFLHTWPERIVSTEAALAFAGYLQRRRTGEPVAYILGQQGFWK 78 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L ++ T PRPETE+LV++AL + ++LDLGTGTGA+ LAL E + Sbjct: 79 LDLEVAPHTLIPRPETEMLVEAALEL----VPAFAPAKVLDLGTGTGAIALALANERQQW 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181 K VD +A+ +A+ N + + L S WF+++EG FD+I+SNPPYI Sbjct: 135 KVTAVDRVPEAVALAERNRQRLQL-DNAQVLNSHWFNALEGQQFDLIISNPPYIADADPH 193 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P +L G DGL RTI HL+ DG +E GY+Q V + Sbjct: 194 LSAGDVR-FEPSSALTAGSDGLDDLRTIIADAPVHLSADGWLLLEHGYDQGPAVRELLIR 252 Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264 + +D G ++R+ C+ Sbjct: 253 HGFERIQTRRDLGEHERITFGCK 275 >gi|168213693|ref|ZP_02639318.1| protein- methyltransferase, release factor-specific [Clostridium perfringens CPE str. F4969] gi|170714843|gb|EDT27025.1| protein- methyltransferase, release factor-specific [Clostridium perfringens CPE str. F4969] Length = 587 Score = 280 bits (716), Expect = 2e-73, Method: Composition-based stats. Identities = 70/263 (26%), Positives = 124/263 (47%), Gaps = 7/263 (2%) Query: 4 LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63 + D+ L +V +I + + N + + + ILG +F + Sbjct: 324 ILDTQLLLGKVLEKDKIWLITNKSEEVKKSDEIHFLNLLEKRKSKMPMQYILGTCEFMGL 383 Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 + PR +TE++V+ L I++ + + DL G+GA+ L+L Sbjct: 384 DFYVEEGVLIPRGDTEIIVEEVLN----NIDEDAEINVCDLCCGSGAIGLSLANYRKNII 439 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIV 180 VDI ++ + N +S+R ++SD S V +D++VSNPPYI + ++ Sbjct: 440 VDLVDIDDIPEKVTRKNIRELELSKRCGFIKSDLLSEVIKKGNKYDILVSNPPYIRTEVI 499 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 + L +V+D++P ++LDGG DGL YR I D L ++G+ + EIG++Q DV + Sbjct: 500 NTLMEDVKDYEPHLALDGGEDGLIFYRRIIDESLEVLKENGILAFEIGHDQGEDVKNLMI 559 Query: 241 SRKLFLVNAFKDYGGNDRVLLFC 263 + + V KD G DR ++ Sbjct: 560 EKGYYDVKVIKDLAGLDRCVIGR 582 >gi|269798158|ref|YP_003312058.1| modification methylase, HemK family [Veillonella parvula DSM 2008] gi|269094787|gb|ACZ24778.1| modification methylase, HemK family [Veillonella parvula DSM 2008] Length = 289 Score = 280 bits (716), Expect = 2e-73, Method: Composition-based stats. Identities = 81/264 (30%), Positives = 129/264 (48%), Gaps = 9/264 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 D L V G + D L + + + K + I+G +DF Sbjct: 27 PRLDGEVLLSHVLGKDRIYLYTHYDQPLIQDELDAFRPLVQQRAKGHCVAAIIGEKDFMG 86 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + ++ PRP+TE L++ L K +RILD+ TG G + L+LL P Sbjct: 87 LTFKVNDKVLIPRPDTETLIEHVLG----TYPKDSNLRILDVCTGPGTILLSLLHYLPNS 142 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG---LFDVIVSNPPYIESVI 179 GVG+DIS AL +A+ N + +S+R ++SD F ++ G FD+IVSNPPYI + Sbjct: 143 SGVGLDISTDALPVARENGESFNLSDRVQFMESDMFHTLYGKKEKFDLIVSNPPYIRTGD 202 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 + L +V + +P I+L GG DGL YR +A +LN +G + E+G++Q +V + Sbjct: 203 LKMLSPDVLN-EPHIALFGGEDGLQFYRILAKECRNYLNANGRVAFEVGFDQAEEVGALL 261 Query: 240 ESRK-LFLVNAFKDYGGNDRVLLF 262 + ++ D GG +RV+ Sbjct: 262 QETGQYSNIHFIADLGGYNRVVTA 285 >gi|15642177|ref|NP_231809.1| hemK protein [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121586800|ref|ZP_01676582.1| hemK protein [Vibrio cholerae 2740-80] gi|153818816|ref|ZP_01971483.1| hemK protein [Vibrio cholerae NCTC 8457] gi|153823574|ref|ZP_01976241.1| hemK protein [Vibrio cholerae B33] gi|227082303|ref|YP_002810854.1| hemK protein [Vibrio cholerae M66-2] gi|229507744|ref|ZP_04397249.1| methylase of polypeptide chain release factors [Vibrio cholerae BX 330286] gi|229512020|ref|ZP_04401499.1| methylase of polypeptide chain release factors [Vibrio cholerae B33] gi|229607289|ref|YP_002877937.1| methylase of polypeptide chain release factor [Vibrio cholerae MJ-1236] gi|254849257|ref|ZP_05238607.1| hemK protein [Vibrio cholerae MO10] gi|255745093|ref|ZP_05419042.1| methylase of polypeptide chain release factors [Vibrio cholera CIRS 101] gi|298497807|ref|ZP_07007614.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Vibrio cholerae MAK 757] gi|18203196|sp|Q9KQ26|HEMK_VIBCH RecName: Full=Protein methyltransferase hemK homolog; AltName: Full=M.VchAHemK2P gi|9656732|gb|AAF95323.1| hemK protein [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121548967|gb|EAX59006.1| hemK protein [Vibrio cholerae 2740-80] gi|126510659|gb|EAZ73253.1| hemK protein [Vibrio cholerae NCTC 8457] gi|126518909|gb|EAZ76132.1| hemK protein [Vibrio cholerae B33] gi|227010191|gb|ACP06403.1| hemK protein [Vibrio cholerae M66-2] gi|229351985|gb|EEO16926.1| methylase of polypeptide chain release factors [Vibrio cholerae B33] gi|229355249|gb|EEO20170.1| methylase of polypeptide chain release factors [Vibrio cholerae BX 330286] gi|229369944|gb|ACQ60367.1| methylase of polypeptide chain release factor [Vibrio cholerae MJ-1236] gi|254844962|gb|EET23376.1| hemK protein [Vibrio cholerae MO10] gi|255736923|gb|EET92319.1| methylase of polypeptide chain release factors [Vibrio cholera CIRS 101] gi|297542140|gb|EFH78190.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Vibrio cholerae MAK 757] Length = 286 Score = 280 bits (716), Expect = 2e-73, Method: Composition-based stats. Identities = 87/263 (33%), Positives = 124/263 (47%), Gaps = 9/263 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 D+ LC V ++ PD +L+ L + R E + ILG R+F++ Sbjct: 24 PALDAAVLLCHVLAKPRSYLLTWPDKILEKPTLASLELLLARRRAGEPMAYILGEREFWS 83 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +S T PRP+TE LV+ AL + +LDLGTGTGA+ LAL E P Sbjct: 84 LPLKVSPSTLIPRPDTERLVELALDKAALID-----GELLDLGTGTGAIALALASELPTR 138 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIV 180 + G+D+ +A E+A+ NA + Q WFS + F +IVSNPPYIE Sbjct: 139 QVTGIDLRPEAAELARENATRLAI-HNAQFFQGSWFSPLADGTKFALIVSNPPYIEENDP 197 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 +VR F+P+ +L +GL+ R I+ L G E GY+Q V V I Sbjct: 198 HLSLGDVR-FEPKSALVAAENGLADIRHISTHAPHFLLDGGWLLFEHGYDQGVAVRTILR 256 Query: 241 SRKLFLVNAFKDYGGNDRVLLFC 263 + +DY G+DRV L Sbjct: 257 DLGYQNIITEQDYAGHDRVTLGQ 279 >gi|221135299|ref|ZP_03561602.1| peptide release factor-glutamine N5-methyltransferase(HemK) [Glaciecola sp. HTCC2999] Length = 286 Score = 280 bits (716), Expect = 2e-73, Method: Composition-based stats. Identities = 87/261 (33%), Positives = 130/261 (49%), Gaps = 8/261 (3%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 A D+ LC V + + PD VL Q+ + I + + I ILG+++FY Sbjct: 25 DAKIDAQCLLCAVLDCNRAYLHTWPDKVLSSTQQTEFLHFIEQRQTGKPIAYILGYQNFY 84 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 +S T PRPETE VD +A K + R+LDLGTGTGA+ L+++ + P Sbjct: 85 GYDFAVSPVTLIPRPETEQCVDLVIA-------KPYIKRVLDLGTGTGAIALSIILQRPE 137 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181 + +GVD +A+ +A+ NA QSDWFS V+G FDVIVSNPPY+E Sbjct: 138 LEVLGVDFVPEAVMLAQQNAQNLAPKSNISFKQSDWFSHVDGRFDVIVSNPPYVEPDSPY 197 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 ++R F+P +L +GL+ I +LN++GL +E G+ Q ++ ++ Sbjct: 198 LAKGDIR-FEPNSALTAAENGLADIIRIVSEAKHYLNENGLVILEHGHTQGTEIRQLMTQ 256 Query: 242 RKLFLVNAFKDYGGNDRVLLF 262 V DY G R+ L Sbjct: 257 NGFTNVTTLCDYAGQHRITLG 277 >gi|330881881|gb|EGH16030.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Pseudomonas syringae pv. glycinea str. race 4] Length = 277 Score = 280 bits (716), Expect = 2e-73, Method: Composition-based stats. Identities = 83/263 (31%), Positives = 125/263 (47%), Gaps = 7/263 (2%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A D L G + P+ ++ + R E + ILG + F+ Sbjct: 19 ARLDIELLLAAALGKPRSFLHTWPERIVSTEAALAFAGYLQRRRTGEPVAYILGQQGFWK 78 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L ++ T PRPETE+LV++AL + ++LDLGTGTGA+ LAL E + Sbjct: 79 LDLEVAPHTLIPRPETEMLVEAALELA----PAFAPAKVLDLGTGTGAIALALANERQQW 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181 K VD +A+ +A+ N + + L S WFS++EG FD+I+SNPPYI Sbjct: 135 KVTAVDRVPEAVALAERNRQRLQL-DNAQVLNSHWFSALEGQQFDLIISNPPYIADADPH 193 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P +L G DGL RTI HL+ DG +E GY+Q V + Sbjct: 194 LSAGDVR-FEPSSALTAGSDGLDDLRTIIADAPVHLSADGWLLLEHGYDQGPAVRELLIR 252 Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264 + +D G ++R+ C+ Sbjct: 253 HGFERIQTRRDLGEHERITFGCK 275 >gi|225568387|ref|ZP_03777412.1| hypothetical protein CLOHYLEM_04464 [Clostridium hylemonae DSM 15053] gi|225162615|gb|EEG75234.1| hypothetical protein CLOHYLEM_04464 [Clostridium hylemonae DSM 15053] Length = 303 Score = 280 bits (716), Expect = 2e-73, Method: Composition-based stats. Identities = 90/275 (32%), Positives = 129/275 (46%), Gaps = 25/275 (9%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 +A D+ L VTG++ P++ LD + I R + E + I G ++F Sbjct: 26 EAGIDAWYLLEYVTGITRAAYYAHPETELDADKEDAYFAHIGRRARREPLQHITGEQEFM 85 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 +S PR +TE+LV+ AL P +RILD+ TG+G V +++LK Sbjct: 86 GYSFRVSGHVLIPRQDTEILVEEALKVLAP------GMRILDMCTGSGCVLISILKAGRE 139 Query: 122 ------FKGVGVDISCKALEIAKSNAVT-----------NGVSERFDTLQSDWFSSVEGL 164 +G G DIS +A+ +A+ NA NG RF D F E Sbjct: 140 RLRMERLEGTGSDISPEAVAVAEYNAARLLGRTETGRGNNGCCARF--CTGDLFEKAEER 197 Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224 +D+IVSNPPYI + + L EVR DP I+LDG DGL YR I + ++ + G Sbjct: 198 YDLIVSNPPYIRTEEIRKLQREVRLHDPYIALDGKKDGLYFYRRITAESAAYIAEGGYLM 257 Query: 225 VEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRV 259 EIG++Q DV + E V KD G DR+ Sbjct: 258 FEIGHDQAEDVCALLEQSGYADVFVKKDLAGLDRI 292 >gi|187932826|ref|YP_001884695.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Clostridium botulinum B str. Eklund 17B] gi|187720979|gb|ACD22200.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Clostridium botulinum B str. Eklund 17B] Length = 287 Score = 280 bits (716), Expect = 2e-73, Method: Composition-based stats. Identities = 73/263 (27%), Positives = 123/263 (46%), Gaps = 7/263 (2%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 + D+ L +V +I + +D I + + + IL +F N Sbjct: 25 SRLDAELLLGKVLNKEKIYLITHREEKIDKTNEEKYMELINKRKEKMPVKYILNECEFMN 84 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + + PR +TE+LV+ L I++ D +I DL G+GA+ +AL Sbjct: 85 INFYVEPGVLIPRADTEILVEEVLK----HIDENDSKKICDLCCGSGAIGIALANLRKNI 140 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS---SVEGLFDVIVSNPPYIESVI 179 +D ++ N + + +R ++SD + + +D+IVSNPPYIE Sbjct: 141 NVDLIDYYETPEKVTLINIEKSNILDRASFMKSDLLNKSINDAKRYDIIVSNPPYIEECE 200 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 ++ L +V++++P +L GG DGL Y+ I + LNK+G+ + EIGYNQ DV + Sbjct: 201 INDLMEDVKNYEPHTALSGGKDGLDFYKRIINESINVLNKNGILAFEIGYNQGTDVKELM 260 Query: 240 ESRKLFLVNAFKDYGGNDRVLLF 262 E + V KD G DRV++ Sbjct: 261 EEKNFIEVKIVKDLAGLDRVVIG 283 >gi|190151398|ref|YP_001969923.1| HemK-like protein [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|189916529|gb|ACE62781.1| HemK-like protein [Actinobacillus pleuropneumoniae serovar 7 str. AP76] Length = 314 Score = 280 bits (716), Expect = 2e-73, Method: Composition-based stats. Identities = 94/266 (35%), Positives = 147/266 (55%), Gaps = 4/266 (1%) Query: 1 MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60 + D++ L VT + + ++ L + L + R L+ E + ILG +DF Sbjct: 48 LNPKTDANLLLQAVTKRTKSAIFAFGETALHQTELAELAQLLARRLQGEPMAYILGEKDF 107 Query: 61 YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120 +++ L +S T PRP+TE LV+ AL + R+E + ++ILDLGTGTGA+ LAL E Sbjct: 108 WSLPLKVSPHTLIPRPDTERLVEVALDWVYKRLESQQTLQILDLGTGTGAIALALASELG 167 Query: 121 F-FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESV 178 + +GVD +A+ +A++N G E LQSDWFS++E FD+IVSNPPYI+ Sbjct: 168 DKAQIIGVDFKPEAVTLAETNRQNLGF-ENVRFLQSDWFSALENRQFDLIVSNPPYIDKQ 226 Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238 + +VR F+P +L +GLS + I + +L +G +E G+ Q V +I Sbjct: 227 DENLQYGDVR-FEPLSALVAEQNGLSDLQKIIENAPLYLLDNGALMLEHGWQQAQAVQQI 285 Query: 239 FESRKLFLVNAFKDYGGNDRVLLFCR 264 F+ + + +F+DYGGNDR+ R Sbjct: 286 FQQYQWDEIESFQDYGGNDRLTKAVR 311 >gi|331008867|gb|EGH88923.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 277 Score = 280 bits (716), Expect = 2e-73, Method: Composition-based stats. Identities = 82/263 (31%), Positives = 124/263 (47%), Gaps = 7/263 (2%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A D L G + P+ ++ + R E + ILG + F+ Sbjct: 19 ARLDIELLLAAALGKPRSFLHTWPERIVSTEAALAFAGYLQRRCTGEPVAYILGQQGFWK 78 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L ++ T PRPETE+LV++AL + ++LDLGTGTGA+ LAL E + Sbjct: 79 LDLEVAPHTLIPRPETEMLVEAALELA----PAFAPAKVLDLGTGTGAIALALANERQQW 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181 K VD +A+ +A+ N + + L WFS++EG FD+I+SNPPYI Sbjct: 135 KVTAVDRVPEAVALAERNRQRLQL-DNAQVLNRHWFSALEGQQFDLIISNPPYIADADPH 193 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P +L G DGL RTI HL+ DG +E GY+Q V + Sbjct: 194 LSAGDVR-FEPSSALTAGSDGLDDLRTIIADAPVHLSADGWLLLEHGYDQGPAVRELLIR 252 Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264 + +D G ++R+ C+ Sbjct: 253 HGFERIQTRRDLGEHERITFGCK 275 >gi|170717667|ref|YP_001784743.1| HemK family modification methylase [Haemophilus somnus 2336] gi|168825796|gb|ACA31167.1| modification methylase, HemK family [Haemophilus somnus 2336] Length = 301 Score = 280 bits (716), Expect = 2e-73, Method: Composition-based stats. Identities = 95/271 (35%), Positives = 144/271 (53%), Gaps = 10/271 (3%) Query: 1 MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60 + A D++ L VT S ++ +++L + + LT +VR K E + +LG +F Sbjct: 24 LDAKVDANLLLQTVTKRSKSAILAFSETLLTEDELKQLTELLVRRAKGEPMAYVLGETEF 83 Query: 61 YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD----VVRILDLGTGTGAVCLALL 116 + + L ++ T PRP+TE+LV+ AL + +D +RILDLGTGTGA+ LAL Sbjct: 84 WTLNLQVAPYTLIPRPDTEILVEQALVCIQLLKKSKDFTQSPIRILDLGTGTGAIALALA 143 Query: 117 KESP----FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNP 172 E F+ G+D+ A+++AK+NAV N ++E LQS+WF V G FD+IVSNP Sbjct: 144 DELKKSGQHFEIFGLDVIADAVKLAKTNAVRNHLTE-VQFLQSNWFEQVTGQFDLIVSNP 202 Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232 PYI++ +VR F+P +L G + + I + +L K G VE G+ Q Sbjct: 203 PYIDAEDQHLNQGDVR-FEPLTALVAEKKGYADLQYIIEQAPNYLKKQGFLLVEHGWQQG 261 Query: 233 VDVVRIFESRKLFLVNAFKDYGGNDRVLLFC 263 V F + V DYGGN+R+ L Sbjct: 262 QKVRSFFAEKLWKQVETINDYGGNERITLAQ 292 >gi|152997600|ref|YP_001342435.1| HemK family modification methylase [Marinomonas sp. MWYL1] gi|150838524|gb|ABR72500.1| modification methylase, HemK family [Marinomonas sp. MWYL1] Length = 282 Score = 280 bits (716), Expect = 2e-73, Method: Composition-based stats. Identities = 88/263 (33%), Positives = 136/263 (51%), Gaps = 8/263 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A D+ L V +S+ P+ ++ + R E + +LG + F+N Sbjct: 21 AQLDAQLLLAHVLAVSTSYFYTWPEKLVSTSDVERFNGLLARRELGEPVAYLLGQQAFWN 80 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L ++ T PR +TE LV+ AL+ ++ V RILDLGTGTGA+ L+L E P Sbjct: 81 LDLEVAPCTLIPRADTERLVEVALSV----LDISKVNRILDLGTGTGAIALSLASEQPKS 136 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIV 180 +GVD+ A+ +AK NA+ N +S D LQS WF ++EG FD+IVSNPPYI+ Sbjct: 137 TVMGVDLVEDAVALAKRNALRNKLS-NVDFLQSSWFDALEGCEPFDLIVSNPPYIDPDDE 195 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 +VR F+P+ +L G++ I + + + ++ E GY+Q V + F Sbjct: 196 HLSQGDVR-FEPKSALVADNHGMADIEHIIEVAPKFMQQNAYLMFEHGYDQAASVRKCFI 254 Query: 241 SRKLFLVNAFKDYGGNDRVLLFC 263 V +F+D+GGNDRV + Sbjct: 255 EAGFAAVESFQDFGGNDRVTIGQ 277 >gi|330967415|gb|EGH67675.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Pseudomonas syringae pv. actinidiae str. M302091] Length = 277 Score = 280 bits (716), Expect = 2e-73, Method: Composition-based stats. Identities = 84/263 (31%), Positives = 126/263 (47%), Gaps = 7/263 (2%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A D L G + P+ ++ + R E + ILG + F+ Sbjct: 19 ARLDIELLLAAALGKPRSFLHTWPERIVSTEAAVAFAGYLQRRRTGEPVAYILGQQGFWK 78 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L ++ T PRPETE+LV++AL + ++LDLGTGTGA+ LAL + + Sbjct: 79 LDLEVAPHTLIPRPETEMLVEAALEL----VPAFAPAQVLDLGTGTGAIALALANDRQQW 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181 K VD +A+ +A+ N + + L S WFS++EG FD+I+SNPPYI Sbjct: 135 KVTAVDRVPEAVALAERNRQRLQL-DNAQVLNSHWFSALEGRQFDLIISNPPYIADADPH 193 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P +L G DGL RTI S HLN DG +E GY+Q V + Sbjct: 194 LSAGDVR-FEPSSALTAGSDGLDDLRTIIADASAHLNADGWLLLEHGYDQGPAVRELLIR 252 Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264 + +D G ++R+ C+ Sbjct: 253 HGFERIQTRRDLGEHERITFGCK 275 >gi|74312448|ref|YP_310867.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Shigella sonnei Ss046] gi|191166624|ref|ZP_03028452.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli B7A] gi|218694726|ref|YP_002402393.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli 55989] gi|300821018|ref|ZP_07101167.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS 119-7] gi|307310033|ref|ZP_07589683.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli W] gi|309794303|ref|ZP_07688727.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS 145-7] gi|331676992|ref|ZP_08377688.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli H591] gi|73855925|gb|AAZ88632.1| possible protoporphyrinogen oxidase [Shigella sonnei Ss046] gi|190903273|gb|EDV62994.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli B7A] gi|218351458|emb|CAU97166.1| N5-glutamine methyltransferase, modifies release factors RF-1 and RF-2 [Escherichia coli 55989] gi|300526317|gb|EFK47386.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS 119-7] gi|306909751|gb|EFN40245.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli W] gi|308122208|gb|EFO59470.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS 145-7] gi|315060463|gb|ADT74790.1| N5-glutamine methyltransferase, modifies release factors RF-1 and RF-2 [Escherichia coli W] gi|320199251|gb|EFW73842.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli EC4100B] gi|323168382|gb|EFZ54063.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Shigella sonnei 53G] gi|323172434|gb|EFZ58071.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli LT-68] gi|323185626|gb|EFZ70987.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli 1357] gi|323378973|gb|ADX51241.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli KO11] gi|331075681|gb|EGI46979.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Escherichia coli H591] Length = 277 Score = 280 bits (716), Expect = 2e-73, Method: Composition-based stats. Identities = 90/262 (34%), Positives = 126/262 (48%), Gaps = 8/262 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 RD+ L VTG ++ ++ L D Q L + R E I + G R+F++ Sbjct: 20 PRRDAEILLEYVTGRGRTFILAFGETQLTDEQCQQLDALLTRRRDGEPIAHLTGVREFWS 79 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +S T PRP+TE LV+ ALA RILDLGTGTGA+ LAL E P Sbjct: 80 LPLFVSPATLIPRPDTECLVEQALARL-----PEQPCRILDLGTGTGAIALALASERPDC 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181 + + VD A+ +A+ NA + LQSDWFS++ G F +IVSNPPYI+ Sbjct: 135 EIIAVDRMPDAVSLAQRNAQHLAIK-NIHILQSDWFSALAGQQFAMIVSNPPYIDEQDPH 193 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P +L G++ I + L G +E G+ Q V + F Sbjct: 194 LQQGDVR-FEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFIL 252 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 V +DYG N+RV L Sbjct: 253 AGYHDVETCRDYGDNERVTLGR 274 >gi|307262577|ref|ZP_07544208.1| hypothetical protein appser13_70 [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|306872075|gb|EFN03788.1| hypothetical protein appser13_70 [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 290 Score = 280 bits (716), Expect = 2e-73, Method: Composition-based stats. Identities = 94/266 (35%), Positives = 147/266 (55%), Gaps = 4/266 (1%) Query: 1 MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60 + D++ L VT + + ++ L + L + R L+ E + ILG +DF Sbjct: 24 LNPKTDANLLLQAVTKRTKSAIFAFGETALHQTELAELAQLLARRLQGEPMAYILGEKDF 83 Query: 61 YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120 +++ L +S T PRP+TE LV+ AL + R+E + ++ILDLGTGTGA+ LAL E Sbjct: 84 WSLPLKVSPHTLIPRPDTERLVEVALDWVYKRLESQQTLQILDLGTGTGAIALALASELG 143 Query: 121 F-FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESV 178 + +GVD +A+ +A++N G E LQSDWFS++E FD+IVSNPPYI+ Sbjct: 144 DKAQIIGVDFKPEAVTLAETNRQNLGF-ENVRFLQSDWFSALENRQFDLIVSNPPYIDKQ 202 Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238 + +VR F+P +L +GLS + I + +L +G +E G+ Q V +I Sbjct: 203 DENLQYGDVR-FEPLSALVAEQNGLSDLQKIIENAPLYLLDNGALMLEHGWQQAQAVQQI 261 Query: 239 FESRKLFLVNAFKDYGGNDRVLLFCR 264 F+ + + +F+DYGGNDR+ R Sbjct: 262 FQQYQWDEIESFQDYGGNDRLTKAVR 287 >gi|165977489|ref|YP_001653082.1| protein-glutamine N-methyl transferase [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|165877590|gb|ABY70638.1| protein-glutamine N-methyl transferase [Actinobacillus pleuropneumoniae serovar 3 str. JL03] Length = 320 Score = 280 bits (716), Expect = 2e-73, Method: Composition-based stats. Identities = 96/266 (36%), Positives = 147/266 (55%), Gaps = 4/266 (1%) Query: 1 MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60 + D++ L VT + + ++ L + L + R L+ E + ILG ++F Sbjct: 48 LNPKTDANLLLQAVTKRTKSAIFAFGETALHQTELAELAQLLARRLQGEPMAYILGEKEF 107 Query: 61 YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120 +++ L +S T PRP+TE LV+ AL + R+E + ++ILDLGTGTGA+ LAL E Sbjct: 108 WSLPLKVSPHTLIPRPDTERLVEVALDWVYKRLESQQTLQILDLGTGTGAIALALASELG 167 Query: 121 F-FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESV 178 + +GVD +A+ +A++N G E LQSDWFS++E FD+IVSNPPYI+ Sbjct: 168 DKAQIIGVDFKLEAVTLAETNRQNLGF-ENVRFLQSDWFSALENRQFDLIVSNPPYIDQQ 226 Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238 + +VR F+P +L DGLS + I HLN +G +E G+ Q V +I Sbjct: 227 DENLQYGDVR-FEPLSALVAEQDGLSDLQKIIQNAPLHLNDNGALILEHGWQQAQAVQQI 285 Query: 239 FESRKLFLVNAFKDYGGNDRVLLFCR 264 F+ + + +F+DYGGNDR+ R Sbjct: 286 FQQYQWDEIASFQDYGGNDRLTKAIR 311 >gi|260772291|ref|ZP_05881207.1| Polypeptide chain release factor methylase [Vibrio metschnikovii CIP 69.14] gi|260611430|gb|EEX36633.1| Polypeptide chain release factor methylase [Vibrio metschnikovii CIP 69.14] Length = 280 Score = 279 bits (715), Expect = 2e-73, Method: Composition-based stats. Identities = 91/263 (34%), Positives = 127/263 (48%), Gaps = 10/263 (3%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 D+ LC V ++ PD LD + R + E I I+G R+F+++ Sbjct: 24 LDAALLLCHVLQKPRSYLLTWPDKRLDADAISAFEVLLARRIAGEPIAYIIGEREFWSLP 83 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L ++ T PRP+TE LV+ AL ++ ILDLGTGTGA+ LAL E P Sbjct: 84 LKVAPSTLIPRPDTERLVELALDKAVLIDGD-----ILDLGTGTGAIALALASELPQRHV 138 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDC 182 +G+D+ +A+E+A+ N +S LQ WF+ + F +I SNPPYIE Sbjct: 139 LGIDLRSEAVELAEDNRKRLQLS-NVTFLQGSWFTPLANGIKFALIASNPPYIEEHDPHL 197 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 +VR F+PR +L G +GL+ + IA +L G E GY Q V I Sbjct: 198 QQGDVR-FEPRSALVAGDNGLADIKHIATSAREYLLDRGWLLFEHGYQQGKAVRAILSEL 256 Query: 243 KLFLVNAFKDYGGNDRVLLF-CR 264 V +DY GNDRV L CR Sbjct: 257 GYQQVVTEQDYAGNDRVTLGQCR 279 >gi|219849414|ref|YP_002463847.1| modification methylase, HemK family [Chloroflexus aggregans DSM 9485] gi|219543673|gb|ACL25411.1| modification methylase, HemK family [Chloroflexus aggregans DSM 9485] Length = 293 Score = 279 bits (715), Expect = 2e-73, Method: Composition-based stats. Identities = 81/262 (30%), Positives = 124/262 (47%), Gaps = 6/262 (2%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A D+ L + G S +V+ + + VL Q+ + R E + ++G F+ Sbjct: 31 ARLDAELLLAHILGWSRARVVAEREVVLTPAQQEAFGALVERRAAREPVAYLIGHWPFFG 90 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L + PRPETELLV+ AL + + + + I D+G G+GA+ +AL P Sbjct: 91 LDLVVDRRVLIPRPETELLVELALTEARRYADTQ--ITIADIGVGSGAIAIALAIHVPHA 148 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182 GVD S AL +A N +S+R L+ D + V G D+IVSNPPY I+ Sbjct: 149 TVYGVDRSADALAVAARNVARYNLSDRVVLLEGDLLTPVPGPVDLIVSNPPY---TILAE 205 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF-ES 241 + V ++P ++LDGG DGL YR + +L G +EIG Q V + ++ Sbjct: 206 VDESVYRYEPHLALDGGPDGLDCYRRLIAAAPAYLKPGGAILLEIGAWQAEAVAHLLNQA 265 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 V +D G DRV+ Sbjct: 266 LPHAEVGVQRDLAGRDRVVWAR 287 >gi|261343908|ref|ZP_05971553.1| protein-(glutamine-N5) methyltransferase [Providencia rustigianii DSM 4541] gi|282568294|gb|EFB73829.1| protein-(glutamine-N5) methyltransferase [Providencia rustigianii DSM 4541] Length = 277 Score = 279 bits (715), Expect = 2e-73, Method: Composition-based stats. Identities = 92/262 (35%), Positives = 130/262 (49%), Gaps = 8/262 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A RD+ L TG S ++ ++ L + L + R E I I+G R+F++ Sbjct: 20 AKRDAQILLQHATGRSRTYILAFDETELSAHELQQLEELLQRREFGEPIAYIVGEREFWS 79 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +S T PRP+TE LV+ AL RILDLGTGTGA+ LAL E P Sbjct: 80 LPLYVSPATLIPRPDTECLVEQALIRL-----PSTDCRILDLGTGTGAIALALASERPNS 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVD 181 +GVD + +A+ +A+ N + QSDWF+S+ LFD+IVSNPPYI+ + Sbjct: 135 TVIGVDFNPEAVVLAERNQQRLSIF-NVRFSQSDWFTSLSNELFDMIVSNPPYIDEGDIH 193 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P +L GLS I R+L + G +E G+ Q + V +F Sbjct: 194 LNQGDVR-FEPATALIAEEHGLSDLAHIIAESKRYLKQQGWLLLEHGWQQGLAVRELFSE 252 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 + DYGG DRV L Sbjct: 253 NGYTNIETCLDYGGKDRVSLGQ 274 >gi|237737786|ref|ZP_04568267.1| methyltransferase [Fusobacterium mortiferum ATCC 9817] gi|229419666|gb|EEO34713.1| methyltransferase [Fusobacterium mortiferum ATCC 9817] Length = 378 Score = 279 bits (715), Expect = 2e-73, Method: Composition-based stats. Identities = 77/270 (28%), Positives = 128/270 (47%), Gaps = 12/270 (4%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTN-AIVRSLKHESIHRILGWRDF 60 A D+ + +S + ++ + +++ + + + R + + + +LG +F Sbjct: 110 NARLDAEYIFAHILKVSRVTLTLNLNKKIEEEDKNRIREMLVARGKERKPLQYLLGEWEF 169 Query: 61 YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120 Y + PR +TE+LV+ + + +I+D+GTG+GA+ ++L KE P Sbjct: 170 YGYPFKVDERVLIPRADTEILVEQ----CKYLVNELPSPKIMDIGTGSGAIAISLAKELP 225 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG------LFDVIVSNPPY 174 +G+DIS ALE+A N N + L+SD FS + F++IVSNPPY Sbjct: 226 NTHVLGLDISEGALEVATQNRDINEAT-NVKFLKSDVFSILRDEKYKNVKFNLIVSNPPY 284 Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234 I + L EV ++P+ +L DG Y I+ L KDG E+GYNQ Sbjct: 285 IPTEEYVELMPEVLKYEPKNALTDNGDGYYFYEKISKEAKEFLTKDGYLVFEVGYNQAEK 344 Query: 235 VVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 V +++ KDYGG DRV++ R Sbjct: 345 VADFMRENGFDVLSIVKDYGGIDRVVIGKR 374 Score = 36.6 bits (84), Expect = 3.2, Method: Composition-based stats. Identities = 6/47 (12%), Positives = 13/47 (27%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHE 49 +S + V L + D L Q+ + + + Sbjct: 22 PRLESEKLIAAVLKLDRITLYAYFDMELTTEQKDTIKKYLREMARGR 68 >gi|229524174|ref|ZP_04413579.1| methylase of polypeptide chain release factors [Vibrio cholerae bv. albensis VL426] gi|229337755|gb|EEO02772.1| methylase of polypeptide chain release factors [Vibrio cholerae bv. albensis VL426] Length = 286 Score = 279 bits (715), Expect = 2e-73, Method: Composition-based stats. Identities = 88/263 (33%), Positives = 124/263 (47%), Gaps = 9/263 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 D+ LC V ++ PD L+ L + R E + ILG R+F++ Sbjct: 24 PALDAAVLLCHVLAKPRSYLLTWPDKTLEKPTLVSLELLLARRRAGEPMAYILGEREFWS 83 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +S T PRP+TE LV+ AL + +LDLGTGTGA+ LAL E P Sbjct: 84 LPLKVSPSTLIPRPDTERLVELALDKAALID-----GELLDLGTGTGAIALALASELPTR 138 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIV 180 + G+D+ +A E+A+ NA + LQ WFS + F +IVSNPPYIE Sbjct: 139 QVTGIDLRPEAAELARENATRLAI-HNAQFLQGSWFSPLADGTKFALIVSNPPYIEENDP 197 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 +VR F+P+ +L +GL+ R I+ L G E GY+Q V V I Sbjct: 198 HLSLGDVR-FEPKSALVAAENGLADIRHISTHAPHFLLDGGWLLFEHGYDQGVAVRTILC 256 Query: 241 SRKLFLVNAFKDYGGNDRVLLFC 263 + +DY G+DRV L Sbjct: 257 DLGYQNIITEQDYAGHDRVTLGQ 279 >gi|254804125|ref|YP_003082346.1| heme biosynthesis protein [Neisseria meningitidis alpha14] gi|254667667|emb|CBA03497.1| heme biosynthesis protein [Neisseria meningitidis alpha14] Length = 273 Score = 279 bits (715), Expect = 2e-73, Method: Composition-based stats. Identities = 89/263 (33%), Positives = 123/263 (46%), Gaps = 12/263 (4%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 ++ L V+ + Q++ + D R R L E + ILG R+FY Sbjct: 13 PKNEARMLLQYVSEYTRVQLLTRGGEEMPDEVRQRADRLAQRRLNGEPVAYILGVREFYG 72 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 R T++ PRPETE LV++ LA + R+ DLGTG+GAV + + E P Sbjct: 73 RRFTVNPSVLIPRPETEHLVEAVLARL------PENGRVWDLGTGSGAVAVTVALERPDA 126 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS---SVEGLFDVIVSNPPYIESVI 179 DIS ALE A+ NA G R + WF EG +D+IVSNPPYIE+ Sbjct: 127 FVRASDISPPALETARKNAADLGA--RVEFAHGSWFDTDMPSEGKWDIIVSNPPYIENGD 184 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 L ++R F+P+I+L DGLS RT+A G L + G +E G++Q V + Sbjct: 185 KHLLQGDLR-FEPQIALTDFSDGLSCIRTLAQGAPDRLAEGGFLLLEHGFDQGAAVRGVL 243 Query: 240 ESRKLFLVNAFKDYGGNDRVLLF 262 V D G DRV L Sbjct: 244 AENGFSGVETLPDLAGLDRVTLG 266 >gi|294792025|ref|ZP_06757173.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Veillonella sp. 6_1_27] gi|294457255|gb|EFG25617.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Veillonella sp. 6_1_27] Length = 289 Score = 279 bits (715), Expect = 2e-73, Method: Composition-based stats. Identities = 83/264 (31%), Positives = 129/264 (48%), Gaps = 9/264 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 D L V G + D L + + + K + I+G +DF Sbjct: 27 PRLDGEVLLSHVLGKDRIYLYTHYDQPLIQDELDAFRPLVQQRAKGHCVAAIIGEKDFMG 86 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + ++ PRP+TE L++ L K VRILD+ TG G + L+LL P Sbjct: 87 LTFKVNDKVLIPRPDTETLIEHVLG----TYPKDSNVRILDVCTGPGTILLSLLHYLPNA 142 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG---LFDVIVSNPPYIESVI 179 GVG++IS AL +A+ N +++R L+SD FS++ G FD+IVSNPPYI + Sbjct: 143 CGVGLEISIDALLVAEENGERFNLNDRVQFLESDMFSALAGNAEKFDLIVSNPPYIRTGD 202 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 V L +V + +P I+L GG DGL YR +A +LN +G + E+G++Q +V + Sbjct: 203 VKLLSQDVLN-EPHIALFGGEDGLEFYRILAKECRNYLNANGRVAFEVGFDQAKEVGALL 261 Query: 240 ESRK-LFLVNAFKDYGGNDRVLLF 262 + + D GG++RV+ Sbjct: 262 QETGQYSNIQFIADLGGHNRVVTA 285 >gi|113461091|ref|YP_719159.1| peptide release factor glutamine N(5)-methylase [Haemophilus somnus 129PT] gi|112823134|gb|ABI25223.1| [protein release factor]-glutamine N5-methyltransferase [Haemophilus somnus 129PT] Length = 301 Score = 279 bits (715), Expect = 2e-73, Method: Composition-based stats. Identities = 95/271 (35%), Positives = 144/271 (53%), Gaps = 10/271 (3%) Query: 1 MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60 + A D++ L VT S ++ +++L + + LT +VR K E + +LG +F Sbjct: 24 LDAKVDANLLLQTVTKRSKSAILAFSETLLTEDELKQLTELLVRRAKGEPMAYVLGETEF 83 Query: 61 YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD----VVRILDLGTGTGAVCLALL 116 + + L ++ T PRP+TE+LV+ AL + +D +RILDLGTGTGA+ LAL Sbjct: 84 WTLNLQVAPYTLIPRPDTEILVEQALVCIQLLKKSKDFTQSSIRILDLGTGTGAIALALA 143 Query: 117 KESP----FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNP 172 E F+ G+D+ A+++AK+NAV N ++E LQS+WF V G FD+IVSNP Sbjct: 144 DELKKSGQHFEIFGLDVIADAVKLAKTNAVRNHLTE-VQFLQSNWFEQVTGQFDLIVSNP 202 Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232 PYI++ +VR F+P +L G + + I + +L K G VE G+ Q Sbjct: 203 PYIDAEDQHLNQGDVR-FEPLTALVAEKKGYADLQYIIEQAPNYLKKQGFLLVEHGWQQG 261 Query: 233 VDVVRIFESRKLFLVNAFKDYGGNDRVLLFC 263 V F + V DYGGN+R+ L Sbjct: 262 QKVRSFFAEKLWKQVETINDYGGNERITLAQ 292 >gi|153825564|ref|ZP_01978231.1| hemK protein [Vibrio cholerae MZO-2] gi|149740715|gb|EDM54814.1| hemK protein [Vibrio cholerae MZO-2] Length = 286 Score = 279 bits (715), Expect = 2e-73, Method: Composition-based stats. Identities = 88/263 (33%), Positives = 126/263 (47%), Gaps = 9/263 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 D+ LC V ++ PD +L+ L + R E + ILG R+F++ Sbjct: 24 PALDAAVLLCHVLAKPRSYLLTWPDKILEKPTLASLELLLARRRAGEPMAYILGEREFWS 83 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +S T PRP+TE LV+ AL + +LDLGTGTGA+ LAL E P Sbjct: 84 LPLKVSPSTLIPRPDTERLVELALDKA-----ALIDGELLDLGTGTGAIALALASELPTR 138 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIV 180 + G+D+ +A E+A+ NA + LQ WFS + F +IVSNPPYIE Sbjct: 139 QVTGIDLRPEAAELARENATRLAI-HNAQFLQGSWFSPLADGTKFALIVSNPPYIEENDP 197 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 ++R F+P+ +L +GL+ R I+ R L G E GY+Q V V I Sbjct: 198 HLSLGDLR-FEPKSALVAAENGLADIRHISTHAPRFLLDGGWLLFEHGYDQGVAVRTILR 256 Query: 241 SRKLFLVNAFKDYGGNDRVLLFC 263 + +DY G+DRV L Sbjct: 257 DLGYQNIITEQDYAGHDRVTLGQ 279 >gi|312884084|ref|ZP_07743797.1| methylase of polypeptide chain release factor [Vibrio caribbenthicus ATCC BAA-2122] gi|309368254|gb|EFP95793.1| methylase of polypeptide chain release factor [Vibrio caribbenthicus ATCC BAA-2122] Length = 286 Score = 279 bits (715), Expect = 3e-73, Method: Composition-based stats. Identities = 89/263 (33%), Positives = 122/263 (46%), Gaps = 9/263 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A D+ LC V ++ PD ++ + R E + I+G R+F++ Sbjct: 26 ATLDASVLLCHVLDRPRSYLMTWPDRTVESEVVNKFNELVKRRESGEPVAYIVGEREFWS 85 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +SS T PRP+TE LV+ AL S ILDLGTGTGA+ LAL E P Sbjct: 86 LNLKVSSSTLIPRPDTERLVELALEKSTLV-----KGDILDLGTGTGAIALALASELPDR 140 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIV 180 GVD+ +A IA+ NA + L WF ++ F +IVSNPPYIES Sbjct: 141 NVWGVDLKQEAQHIAQDNAERLSIK-NAQFLFGSWFEPLDHDAKFALIVSNPPYIESDDP 199 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 +VR F+P +L GL+ IA HL + G E G +Q V + E Sbjct: 200 HLSEGDVR-FEPLSALVSEKQGLADIEVIAKQAPEHLLEGGWLLFEHGLDQGEPVRTLLE 258 Query: 241 SRKLFLVNAFKDYGGNDRVLLFC 263 + V F+DYG DRV + Sbjct: 259 TLGYDQVETFQDYGHRDRVTVGR 281 >gi|225076162|ref|ZP_03719361.1| hypothetical protein NEIFLAOT_01194 [Neisseria flavescens NRL30031/H210] gi|224952505|gb|EEG33714.1| hypothetical protein NEIFLAOT_01194 [Neisseria flavescens NRL30031/H210] Length = 270 Score = 279 bits (715), Expect = 3e-73, Method: Composition-based stats. Identities = 83/264 (31%), Positives = 119/264 (45%), Gaps = 12/264 (4%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 ++ L +G + Q++ + D R + R L E + ILG R+FY Sbjct: 13 PKNEARMLLQYASGYTRVQLLTRGGEEIPDEVRQRVDRLAQRRLNGEPVAYILGVREFYG 72 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 ++ PRPETE LV++ LA + R+ DLGTG+GA+ + + E Sbjct: 73 RCFAVNPSVLIPRPETEHLVEAVLARL------PENGRVWDLGTGSGAIAVTVALERVDA 126 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS---SVEGLFDVIVSNPPYIESVI 179 DIS AL+ A+ NA G + + Q WF EG +DVIVSNPPYIE Sbjct: 127 DVRASDISVGALDTARQNAAELGA--KVEFAQGSWFDTDRPSEGRYDVIVSNPPYIEDGD 184 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 ++R F+P+ +L DGLSH R I ++L +G E GY+Q V I Sbjct: 185 EHLSQGDLR-FEPQNALTDFSDGLSHIRHITQEAPKYLKANGWLLFEHGYDQGEAVRNIM 243 Query: 240 ESRKLFLVNAFKDYGGNDRVLLFC 263 V +D G DR+ L Sbjct: 244 LENGFAEVATEQDLAGLDRITLGR 267 >gi|182420442|ref|ZP_02641457.2| protein-(glutamine-N5) methyltransferase, release factor-specific [Clostridium perfringens NCTC 8239] gi|182382208|gb|EDT79687.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Clostridium perfringens NCTC 8239] Length = 572 Score = 279 bits (715), Expect = 3e-73, Method: Composition-based stats. Identities = 70/263 (26%), Positives = 124/263 (47%), Gaps = 7/263 (2%) Query: 4 LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63 + D+ L +V +I + + N + + + ILG +F + Sbjct: 309 ILDTQLLLGKVLEKDKIWLITNKSEEVKKSDEIHFLNLLEKRKSKMPMQYILGTCEFMGL 368 Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 + PR +TE++V+ L I++ + + DL G+GA+ L+L Sbjct: 369 DFYVEEGVLIPRGDTEIIVEEVLN----NIDEDAEINVCDLCCGSGAIGLSLANYRKNII 424 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIV 180 VDI ++ + N +S+R ++SD S V +D++VSNPPYI + ++ Sbjct: 425 VDLVDIDDIPEKVTRKNIRELELSKRCGFIKSDLLSEVIKKGNKYDILVSNPPYIRTEVI 484 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 + L +V+D++P ++LDGG DGL YR I D L ++G+ + EIG++Q DV + Sbjct: 485 NTLMEDVKDYEPHLALDGGEDGLIFYRRIIDESLEVLKENGILAFEIGHDQGEDVKNLMI 544 Query: 241 SRKLFLVNAFKDYGGNDRVLLFC 263 + + V KD G DR ++ Sbjct: 545 EKGYYDVKVIKDLAGLDRCVIGR 567 >gi|310659437|ref|YP_003937158.1| methyltransferase [Clostridium sticklandii DSM 519] gi|308826215|emb|CBH22253.1| Methyltransferase [Clostridium sticklandii] Length = 283 Score = 279 bits (715), Expect = 3e-73, Method: Composition-based stats. Identities = 80/260 (30%), Positives = 139/260 (53%), Gaps = 3/260 (1%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 + + +V ++++ + +D+ + + I + + ILG R+F+ + Sbjct: 22 LEIQMMIAKVIEKDRLYIMLNLEEDIDESKVEIIKTMIEKRKNSYPLQYILGEREFWGMD 81 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 +S PR +TE+L++ L K + ++ ++G G+G + + LLKE Sbjct: 82 FNVSEGVLIPRQDTEILIEETLKKLKNHKHKSN-LKGFEIGVGSGIISITLLKEIETLIM 140 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVDC 182 +GVDI+ KA+E+ K+NA + VS+R L S+ F + E FD I+SNPPYIE+ ++D Sbjct: 141 IGVDINDKAIELTKANASKHQVSDRLCILNSNLFEKINKENQFDFIISNPPYIETKVIDS 200 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 L +++ +P+++LDGG DGL YR I + +++ +G + EIGYNQ V +IF Sbjct: 201 LQEDIKQHEPKLALDGGADGLDFYRDIIEQSKHYISPEGFIAFEIGYNQAEAVKKIFVEN 260 Query: 243 KLFLVNAFKDYGGNDRVLLF 262 V KD G DRV++ Sbjct: 261 GYQNVTIAKDLAGFDRVVIG 280 >gi|90416953|ref|ZP_01224882.1| hemK protein [marine gamma proteobacterium HTCC2207] gi|90331300|gb|EAS46544.1| hemK protein [marine gamma proteobacterium HTCC2207] Length = 277 Score = 279 bits (715), Expect = 3e-73, Method: Composition-based stats. Identities = 83/262 (31%), Positives = 127/262 (48%), Gaps = 8/262 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 D LC V G++ + P+ + + R + E + ++G + F++ Sbjct: 20 PQLDCELLLCFVLGVAPSYLKTWPERQVSGDHWAQFDALLQRRIAGEPVAYLIGSQGFWS 79 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +S T PRPETELLV+ AL +LP + +LDLGTGTGA+ LAL E + Sbjct: 80 LDLEVSPATLIPRPETELLVEVALDLALP-----EQAAVLDLGTGTGAIALALASERNGW 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVD 181 + VD+ A+++A+ N + SDWF+++ FD+IVSNPPYIE+ Sbjct: 135 QICAVDLQQSAVDLAERNRQRYQL-NNVRLFASDWFAAIPVQRFDLIVSNPPYIEANDPH 193 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P +L G DGL R + +L G +E G++Q V + E Sbjct: 194 LTQGDVR-FEPASALVSGDDGLDDLRLVCSQSVDYLADGGWLLLEHGFDQGAAVRELLER 252 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 LV D G +R+ L C Sbjct: 253 AGFTLVETRSDLNGCERITLGC 274 >gi|330961729|gb|EGH61989.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Pseudomonas syringae pv. maculicola str. ES4326] Length = 277 Score = 279 bits (714), Expect = 3e-73, Method: Composition-based stats. Identities = 80/263 (30%), Positives = 126/263 (47%), Gaps = 7/263 (2%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A D L G + P+ ++ + R K E + ILG + F+ Sbjct: 19 ARLDVELLLAAALGKPRSFLHTWPERIVSTEAAVAFAGYLERRRKGEPVAYILGQQGFWK 78 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L ++ T PRPETE+LV++AL + ++LDLGTGTGA+ LAL E + Sbjct: 79 LDLEVAPHTLIPRPETEMLVEAALEL----VPAFASAQVLDLGTGTGAIGLALANERKQW 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181 K VD +A+ +A+ N + + +S WFS ++G FD+I+SNPPY+ Sbjct: 135 KVTAVDRVAEAVALAERNRQRLHL-NNAEIFESHWFSGLQGRQFDLIISNPPYVPDDDPH 193 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P +L G DGL R I + HLN +G +E GY+Q V + Sbjct: 194 LSAGDVR-FEPSSALIAGADGLDDLRAITEQAPAHLNAEGWLLLEHGYDQGAAVRELLIR 252 Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264 + + +D G ++R+ C+ Sbjct: 253 QGFERIQTRRDLGEHERITFGCK 275 >gi|323698088|ref|ZP_08110000.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Desulfovibrio sp. ND132] gi|323458020|gb|EGB13885.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Desulfovibrio desulfuricans ND132] Length = 283 Score = 279 bits (714), Expect = 3e-73, Method: Composition-based stats. Identities = 88/261 (33%), Positives = 128/261 (49%), Gaps = 7/261 (2%) Query: 7 SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66 + G S + +D VL D + + + R E + ILG R+FY + Sbjct: 26 AELLAAHALGCSRPALNLDRGRVLTDEELAAVETLVARREAGEPVAYILGNREFYGLDFA 85 Query: 67 LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126 +S PRPETE +V++ R K R DLGTG+G + + + P +GV Sbjct: 86 VSPAVLIPRPETEHIVEAV----EERFSKDQPFRFADLGTGSGILAVTIAVLFPQARGVA 141 Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS-VEGLFDVIVSNPPYIESVIVDCLGL 185 VDIS AL++A++NA T+ V++R D LQ+D+ S EG +D++VSNPPY+ + Sbjct: 142 VDISPDALDVARANARTHNVADRLDFLQADFTSQTPEGPYDLVVSNPPYVTEAEFEAASR 201 Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR--K 243 EV F+P +L G DGL H R + V+ L G +EIG+ Q V+ I Sbjct: 202 EVTGFEPTGALVSGPDGLDHIRAMLPRVADMLRPGGWMFMEIGWEQGCAVMNILAGEYPS 261 Query: 244 LFLVNAFKDYGGNDRVLLFCR 264 V KD G DRV+ R Sbjct: 262 FEAVGVRKDLAGLDRVVCARR 282 >gi|146306095|ref|YP_001186560.1| HemK family modification methylase [Pseudomonas mendocina ymp] gi|145574296|gb|ABP83828.1| [protein release factor]-glutamine N5-methyltransferase [Pseudomonas mendocina ymp] Length = 294 Score = 279 bits (714), Expect = 3e-73, Method: Composition-based stats. Identities = 81/262 (30%), Positives = 131/262 (50%), Gaps = 8/262 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 D L G + P+ LD++Q+ ++R + E + ILG + F++ Sbjct: 36 PRLDVELLLAAALGKPRSYLRTWPERELDEQQQALFQANLMRRRQGEPVAYILGHQGFWS 95 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L ++ T PRP+TELLV++AL + + +LDLGTGTGA+ LAL E P + Sbjct: 96 LELEVAPHTLIPRPDTELLVETALE-----LLPATPLTVLDLGTGTGAIALALASERPAW 150 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181 + GVD A+ +A+ N + + + S WFS++ G + +I+SNPPYI + Sbjct: 151 RVTGVDRVEDAVALAERNRQRLQL-DNAAFVHSHWFSALSGQRYGLILSNPPYIRADDRH 209 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P +L G DGL R I HL G +E G++Q V + + Sbjct: 210 LNEGDVR-FEPSSALVAGSDGLDDIRAIIQAAPAHLLAGGWLLLEHGFDQAEAVRGLLAA 268 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 V++ +D GG++R+ L Sbjct: 269 AGFAEVHSRRDLGGHERISLGR 290 >gi|167629002|ref|YP_001679501.1| methyltransferase, putative [Heliobacterium modesticaldum Ice1] gi|167591742|gb|ABZ83490.1| methyltransferase, putative [Heliobacterium modesticaldum Ice1] Length = 297 Score = 279 bits (714), Expect = 3e-73, Method: Composition-based stats. Identities = 81/263 (30%), Positives = 129/263 (49%), Gaps = 6/263 (2%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 ++ L G+S ++ L D Q+ L I R L + I G ++F+ Sbjct: 30 PRLEAEVLLAYGLGVSRAGLLAMLRDQLTDAQQARLGELIQRRLTGCPLQYITGRQEFWG 89 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + ++ PRPETELLV++ALA + I D+G G+GA+ +A+ +E P Sbjct: 90 LDFAVTPAVLIPRPETELLVETALALL---GRQDRTAWIADVGVGSGAIAVAMARERPRL 146 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG---LFDVIVSNPPYIESVI 179 + + D+S AL +A+ NA +GV+ + + D ++SNPPYI S Sbjct: 147 QVLATDLSEAALAVARQNAKRHGVAGQIRFARGDLLDPAIDAAIRLKAVLSNPPYIPSGH 206 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 + L EV F+P+++LDGG DGL YR +A L G ++EIGYNQ V +F Sbjct: 207 IPSLQREVAGFEPKLALDGGEDGLDLYRRLAFKAGLVLEPGGFVALEIGYNQGEAVSSLF 266 Query: 240 ESRKLFLVNAFKDYGGNDRVLLF 262 ++ + +D G+DRV+ Sbjct: 267 AAQGFRDIGLIRDGQGHDRVVTA 289 >gi|167644952|ref|YP_001682615.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Caulobacter sp. K31] gi|167347382|gb|ABZ70117.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Caulobacter sp. K31] Length = 285 Score = 279 bits (714), Expect = 3e-73, Method: Composition-based stats. Identities = 94/264 (35%), Positives = 145/264 (54%), Gaps = 5/264 (1%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 Q D+ L ++ +I DP VL + Q L + + R E + I+G + F+ Sbjct: 23 QPAIDARLLLEVAADVTRTDIITDPYRVLTETQMATLNDFLERRAAREPVSHIIGRKGFW 82 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 + L ++ + PRPETE++VD L ++ +LDLG G+G + LA+L E P Sbjct: 83 KILLQVNKNVLTPRPETEVIVDEVLK----AFPEQMSFNMLDLGVGSGTILLAVLAERPA 138 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIV 180 KG+G+D+S AL +A+ NA + +S R L+ DW + + + FD++VSNPPYI + ++ Sbjct: 139 AKGLGIDVSEDALAVARENAASLDLSGRVALLRGDWTNGLGDNGFDLVVSNPPYIATHVI 198 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 + L EVRD +PR++LDGG DGL YR +A + R L + +VEIGY+Q V +F Sbjct: 199 ETLEPEVRDHEPRLALDGGPDGLDAYRLLAGEILRVLKPGAMFAVEIGYDQSAAVEALFR 258 Query: 241 SRKLFLVNAFKDYGGNDRVLLFCR 264 V KD NDRV+ + Sbjct: 259 EAGAQNVRTIKDLSVNDRVVTGTK 282 >gi|163815256|ref|ZP_02206633.1| hypothetical protein COPEUT_01416 [Coprococcus eutactus ATCC 27759] gi|158449451|gb|EDP26446.1| hypothetical protein COPEUT_01416 [Coprococcus eutactus ATCC 27759] Length = 284 Score = 279 bits (714), Expect = 3e-73, Method: Composition-based stats. Identities = 79/263 (30%), Positives = 126/263 (47%), Gaps = 4/263 (1%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 A D+ +G++ + + D + I R E + I G ++F Sbjct: 21 DAEIDAALLWEHASGMNRTDMFFERDRDISTELETGYLELIRRRCTREPLQYITGVQNFM 80 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 S + PR +TE+LV++AL + + + +LD+ GTG + ++ P Sbjct: 81 GYDFCTSENVLIPRQDTEILVETALNLTK---SSQKTLDVLDMCCGTGCIGISYGLLRPD 137 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180 K DIS A+ + + N ERFD + +D F V+G FD+I+SNPPYI+S ++ Sbjct: 138 SKVTLADISGDAIRVTRKNVTKLCDEPERFDVINTDLFGDVDGQFDLILSNPPYIKSDVI 197 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 + L EVRD +PR++LDG DGL YR I +++ +G EIG +Q DV +F Sbjct: 198 EALMPEVRDNEPRLALDGKADGLYFYRIIVSQAIKYIKDEGYVVFEIGNDQAEDVQHLFV 257 Query: 241 SRKLFLVNAFKDYGGNDRVLLFC 263 V+ +D NDRV+ Sbjct: 258 DTGYDDVHVVQDLCRNDRVVYGR 280 >gi|239628685|ref|ZP_04671716.1| modification methylase [Clostridiales bacterium 1_7_47_FAA] gi|239518831|gb|EEQ58697.1| modification methylase [Clostridiales bacterium 1_7_47FAA] Length = 328 Score = 279 bits (714), Expect = 3e-73, Method: Composition-based stats. Identities = 83/268 (30%), Positives = 130/268 (48%), Gaps = 14/268 (5%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFF-----LTNAIVRSLKHESIHRILG 56 A D+ L G S + D L + + F I R + + + G Sbjct: 54 DAGLDARYLLLEAFGQSLASFLAVKDKALPEDEETFSKCRKYEEMIDRRAERIPLQHLTG 113 Query: 57 WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116 ++F ++ PR +TE LV+ L +K +LD+ TG+G + ++L Sbjct: 114 VQEFMGFEFYVNEHVLIPRQDTETLVELVLKE-----QKGKDAALLDVCTGSGCIAISLA 168 Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSER--FDTLQSDWFSSVEG--LFDVIVSNP 172 + +D+S +AL +A NA F+ ++SD F +E +D+IVSNP Sbjct: 169 LMGGYRDVTALDVSREALAVAARNAQRLLKEHEGEFNLIESDMFERLEPDRRYDIIVSNP 228 Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232 PYI S ++ L EVRD++PR++LDG DGL+ YR +A+G +HL G +EIG++Q Sbjct: 229 PYIPSHDIEGLEPEVRDYEPRMALDGTADGLAFYRILAEGCRKHLCPGGCVYMEIGFDQG 288 Query: 233 VDVVRIFESRKLFLVNAFKDYGGNDRVL 260 V R+FE + V KD G DRV+ Sbjct: 289 QAVSRMFEMQGYVQVEVMKDMAGLDRVV 316 >gi|238899146|ref|YP_002924828.1| N5-glutamine methyltransferase, modifies release factors RF-1 and RF-2 [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|229466906|gb|ACQ68680.1| N5-glutamine methyltransferase, modifies release factors RF-1 and RF-2 [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 285 Score = 279 bits (714), Expect = 3e-73, Method: Composition-based stats. Identities = 80/258 (31%), Positives = 129/258 (50%), Gaps = 7/258 (2%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 RD+ L VTG ++ ++ L ++ L + R + E I ++G R+F++ Sbjct: 20 PKRDAEILLGYVTGKPRSVLLGFGETKLTVEEQASLEIIVQRRAQGEPIAYLIGEREFWS 79 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + +++S T PRP+TE LV+ AL R R+LDLGTGTG + LAL E Sbjct: 80 LPISVSPVTLIPRPDTECLVEQALKHI-----PRGASRVLDLGTGTGCIALALGHERSDC 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182 +G DI + +++A NA G+ Q +WFS+V G F VIVSNPPYI++ Sbjct: 135 TIIGTDIKEETIKLASHNAKKLGLPH-LSFFQGNWFSAVNGYFSVIVSNPPYIDAEDPHL 193 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 ++R ++P +L +GL+ + I +L G +E G+ Q + +F Sbjct: 194 NKGDLR-YEPLSALVSADEGLADVKHIIRESPHYLTSCGWLLLEHGWQQSDKIQTLFYQT 252 Query: 243 KLFLVNAFKDYGGNDRVL 260 V+ ++D GG+ RV Sbjct: 253 GFSSVSTYRDDGGHPRVT 270 >gi|294635784|ref|ZP_06714244.1| protein-(glutamine-N5) methyltransferase [Edwardsiella tarda ATCC 23685] gi|291090884|gb|EFE23445.1| protein-(glutamine-N5) methyltransferase [Edwardsiella tarda ATCC 23685] Length = 278 Score = 279 bits (714), Expect = 3e-73, Method: Composition-based stats. Identities = 85/262 (32%), Positives = 134/262 (51%), Gaps = 8/262 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 RD+ L V+G ++ ++ L Q L + R + E + ++G R+F++ Sbjct: 21 PRRDAEILLEHVSGKGRSFILAFGETRLTAAQLERLAALLARREQGEPVAYLIGQREFWS 80 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +S T PRP+TE LV+ AL R +I+DLGTGTGA+ LAL E P Sbjct: 81 LALEVSPATLIPRPDTECLVEQALQRLPAR-----PAQIVDLGTGTGAIALALASERPDC 135 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181 + V+ + +A+ +A+ NA G++ R + LQ WF+ + G FD+IV+NPPYI++ Sbjct: 136 RVSAVEFNPEAVALARRNAERLGLA-RVEILQGSWFAPLAGRRFDMIVANPPYIDADDAH 194 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P +L GL+ R IA +L +G +E G+ Q V + Sbjct: 195 LSLGDVR-FEPASALVAAEQGLADLRIIASQAPHYLAAEGWLLLEHGWQQGAAVRALLND 253 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 V + +DYG N+RV L Sbjct: 254 VGFSRVESVRDYGDNERVTLGQ 275 >gi|115522191|ref|YP_779102.1| HemK family modification methylase [Rhodopseudomonas palustris BisA53] gi|115516138|gb|ABJ04122.1| modification methylase, HemK family [Rhodopseudomonas palustris BisA53] Length = 313 Score = 278 bits (713), Expect = 4e-73, Method: Composition-based stats. Identities = 101/260 (38%), Positives = 146/260 (56%), Gaps = 1/260 (0%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 D+ + V GL Q+++ + VL Q L + R + E + RILG ++F+ + Sbjct: 52 LDARLLVGEVAGLDLTQLVLAAERVLTPEQAIRLEDFARRRIAGEPVARILGHQEFWGLT 111 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L LS DT PRP+TE +V++AL + + R +RI DLGTGTGA+ LALL E P +G Sbjct: 112 LQLSPDTLVPRPDTETMVEAALDLARDWTD-RAALRIADLGTGTGAILLALLSEWPNARG 170 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184 V D+SC+AL A+ NA G+ R + D+ ++++G FD+IVSNPPYI + + L Sbjct: 171 VATDLSCEALRTARGNADRLGLGARTRFVACDYAAALKGPFDLIVSNPPYIPAAEIATLA 230 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 +EV D DPR +LDGG DGL YR IA + L+ G VE+G Q V + + L Sbjct: 231 VEVSDHDPRRALDGGDDGLDAYRAIAPQAAALLSPGGALIVEVGQGQSEPVAGLMAASGL 290 Query: 245 FLVNAFKDYGGNDRVLLFCR 264 L D GG R ++ + Sbjct: 291 TLDAPRPDLGGIFRAVIGRK 310 >gi|325199156|gb|ADY94612.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Neisseria meningitidis G2136] Length = 273 Score = 278 bits (713), Expect = 4e-73, Method: Composition-based stats. Identities = 88/263 (33%), Positives = 122/263 (46%), Gaps = 12/263 (4%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 ++ L V+ + Q++ + D R R L E + ILG R+FY Sbjct: 13 PKNEARMLLQYVSEYTRVQLLTRGGEEMPDEVRQRADRLAQRRLNGEPVAYILGVREFYG 72 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 R T++ PRPETE LV++ LA + R+ DLGTG+GAV + + E P Sbjct: 73 RRFTVNPSVLIPRPETEHLVEAVLARL------PENGRVWDLGTGSGAVAVTVALERPDA 126 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS---SVEGLFDVIVSNPPYIESVI 179 DIS ALE A+ NA G R + WF EG +D+IVSNPPYIE+ Sbjct: 127 FVRASDISPPALETARKNAADLGA--RVEFAHGSWFDTDMPSEGKWDIIVSNPPYIENGD 184 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 ++R F+P+I+L DGLS RT+A G L + G +E G++Q V + Sbjct: 185 KHLSQGDLR-FEPQIALTDFSDGLSCIRTLAQGAPDRLAEGGFLLLEHGFDQGAAVRGVL 243 Query: 240 ESRKLFLVNAFKDYGGNDRVLLF 262 V D G DRV L Sbjct: 244 AENGFSGVETLPDLAGLDRVTLG 266 >gi|119472533|ref|ZP_01614581.1| N5-glutamine methyltransferase, modifies release factors RF-1 and RF-2 [Alteromonadales bacterium TW-7] gi|119444857|gb|EAW26157.1| N5-glutamine methyltransferase, modifies release factors RF-1 and RF-2 [Alteromonadales bacterium TW-7] Length = 279 Score = 278 bits (713), Expect = 4e-73, Method: Composition-based stats. Identities = 87/262 (33%), Positives = 128/262 (48%), Gaps = 8/262 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A D+ L V + P+ +L Q+ R L E + I G R+F++ Sbjct: 23 AKLDAQVLLLHVLDKPRSYLFTWPERLLSTEQQHSFDTLCARRLSGEPVAHITGQREFWS 82 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +++ T PRP+TE LV++AL + + ++LDLGTGTGA+ LAL E P + Sbjct: 83 LTLEVNATTLIPRPDTETLVEAALGLGIS-----ENAKVLDLGTGTGAIALALGSEMPLW 137 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVD 181 VD A+ +A N G+S QS+WFSS++ FD+IV+NPPYIES Sbjct: 138 NITAVDKVTDAVTLATRNQQRLGLS-NVRVKQSNWFSSLDNEYFDLIVTNPPYIESSDEH 196 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P +L G+S + I +L G +E GY+Q V F++ Sbjct: 197 LAQGDVR-FEPLSALVAEDSGMSDIKQIITHSRDYLLSSGYLLIEHGYDQGFAVREFFKT 255 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 + KD G NDRV L Sbjct: 256 MAFVNIKTIKDLGENDRVTLAQ 277 >gi|154482490|ref|ZP_02024938.1| hypothetical protein EUBVEN_00157 [Eubacterium ventriosum ATCC 27560] gi|149736691|gb|EDM52577.1| hypothetical protein EUBVEN_00157 [Eubacterium ventriosum ATCC 27560] Length = 237 Score = 278 bits (713), Expect = 4e-73, Method: Composition-based stats. Identities = 78/239 (32%), Positives = 121/239 (50%), Gaps = 5/239 (2%) Query: 24 VDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVD 83 +DP + + + + I G ++F + ++ D PR +TELLV+ Sbjct: 1 MDPMMTVSKERADKYMELVGIRASKIPLQHITGSQEFMGLDFKVNEDVLIPRQDTELLVE 60 Query: 84 SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143 +A+ + + V +LD+ TG+G + +++ + K VD S KAL +AK N Sbjct: 61 NAITYIK---SVKGDVDVLDMCTGSGCIAISIDRLCENAKVTAVDFSEKALVVAKENNAL 117 Query: 144 NGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203 N QSD F +VE +DVIVSNPPYI++ ++ L EVR +P ++LDG DGL Sbjct: 118 NKAD--VTFFQSDLFENVEKQYDVIVSNPPYIKTEEIESLMDEVRIHEPMMALDGDCDGL 175 Query: 204 SHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262 Y+ IA ++L +G+ EIGY+Q V I E + +KD GNDRV+ Sbjct: 176 KFYKKIAKEGRQYLRSNGIIFFEIGYDQGQTVPAILEENGYKDIKVYKDLSGNDRVVTA 234 >gi|28868325|ref|NP_790944.1| hemK protein [Pseudomonas syringae pv. tomato str. DC3000] gi|28851562|gb|AAO54639.1| hemK protein [Pseudomonas syringae pv. tomato str. DC3000] Length = 277 Score = 278 bits (713), Expect = 4e-73, Method: Composition-based stats. Identities = 83/263 (31%), Positives = 125/263 (47%), Gaps = 7/263 (2%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A D L G + P+ ++ + R E + ILG + F+ Sbjct: 19 ARLDIELLLAAALGKPRSFLHTWPERIVSTEAAVAFAGYLQRRRTGEPVAYILGQQGFWK 78 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L ++ T PRPETE+LV++AL + ++LDLGTGTGA+ LAL + + Sbjct: 79 LDLEVAPHTLIPRPETEMLVEAALEL----VPAFAPAQVLDLGTGTGAIALALANDRQQW 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181 K VD +A+ +A+ N + + L S WFS++EG FD+I+SNPPYI Sbjct: 135 KVTAVDRVPEAVALAERNRQRLQL-DYAQVLNSHWFSALEGRQFDLIISNPPYIADADPH 193 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P +L G DGL RTI HLN DG +E GY+Q V + Sbjct: 194 LSAGDVR-FEPSSALTAGADGLDDLRTIIADAQAHLNADGWLLLEHGYDQGPAVRELLTR 252 Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264 + +D G ++R+ C+ Sbjct: 253 HGFERIQTRRDLGEHERITFGCK 275 >gi|293433528|ref|ZP_06661956.1| protein-(glutamine-N5) methyltransferase [Escherichia coli B088] gi|291324347|gb|EFE63769.1| protein-(glutamine-N5) methyltransferase [Escherichia coli B088] Length = 277 Score = 278 bits (713), Expect = 4e-73, Method: Composition-based stats. Identities = 89/262 (33%), Positives = 125/262 (47%), Gaps = 8/262 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 RD+ L VTG ++ ++ L D Q L + R E I + G R+F++ Sbjct: 20 PRRDAEILLEYVTGRGRTFILAFGETQLTDEQCQQLDALLTRRRDGEPIAHLTGVREFWS 79 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +S T PRP+TE LV+ ALA RILDLGTGTGA+ LAL E P Sbjct: 80 LPLFVSPATLIPRPDTECLVEQALARL-----PEQPCRILDLGTGTGAIALALASERPDC 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181 + + VD A+ + + NA + LQSDWFS++ G F +IVSNPPYI+ Sbjct: 135 EIIAVDRMPDAVSLTQRNAQHLAIK-NIHILQSDWFSALAGQQFAMIVSNPPYIDEQDPH 193 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P +L G++ I + L G +E G+ Q V + F Sbjct: 194 LQQGDVR-FEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFIL 252 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 V +DYG N+RV L Sbjct: 253 AGYHDVETCRDYGDNERVTLGR 274 >gi|295690768|ref|YP_003594461.1| protein-(glutamine-N5) methyltransferase [Caulobacter segnis ATCC 21756] gi|295432671|gb|ADG11843.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Caulobacter segnis ATCC 21756] Length = 289 Score = 278 bits (713), Expect = 4e-73, Method: Composition-based stats. Identities = 93/264 (35%), Positives = 143/264 (54%), Gaps = 5/264 (1%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 Q D+ L G++ +++ DP L Q L + R + E + I+G + F+ Sbjct: 23 QPSIDARLMLEVAAGVTRTEIVTDPYRELTAEQAAMLDEFLTRRARREPVSHIIGRKGFW 82 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 + L ++ + PRPETE++VD L + +LDLG G+G + LA+L E P Sbjct: 83 KILLQVNKNVLTPRPETEVIVDEVLK----AFPEAMPFSMLDLGVGSGTILLAVLAERPA 138 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIV 180 KG+GVD S +AL +A+ NA ++ R L DW + + + FD++ SNPPYI S ++ Sbjct: 139 AKGLGVDASSEALAVARDNAANLDLNNRATFLHGDWTAGLADASFDLVASNPPYIPSAVI 198 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 + L EVRD +PR++LDGG DGL YR +A + R L G+ +VEIGY+Q V +F Sbjct: 199 ETLEPEVRDHEPRLALDGGADGLDAYRLLAPEILRVLKPGGMFAVEIGYDQSKAVESLFN 258 Query: 241 SRKLFLVNAFKDYGGNDRVLLFCR 264 + V KD +DRV+ + Sbjct: 259 AAGAQQVRTTKDLSTHDRVVTGVK 282 >gi|229519156|ref|ZP_04408599.1| methylase of polypeptide chain release factors [Vibrio cholerae RC9] gi|229343845|gb|EEO08820.1| methylase of polypeptide chain release factors [Vibrio cholerae RC9] Length = 286 Score = 278 bits (713), Expect = 5e-73, Method: Composition-based stats. Identities = 86/260 (33%), Positives = 123/260 (47%), Gaps = 9/260 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 D+ LC V ++ PD +L+ L + R E + ILG R+F++ Sbjct: 24 PALDAAVLLCHVLAKPRSYLLTWPDKILEKPTLASLELLLARRRAGEPMAYILGEREFWS 83 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +S T PRP+TE LV+ AL + +LDLGTGTGA+ LAL E P Sbjct: 84 LPLKVSPSTLIPRPDTERLVELALDKAALID-----GELLDLGTGTGAIALALASELPTR 138 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIV 180 + G+D+ +A E+A+ NA + Q WFS + F +IVSNPPYIE Sbjct: 139 QVTGIDLRPEAAELARENATRLAI-HNAQFFQGSWFSPLADGTKFALIVSNPPYIEENDP 197 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 +VR F+P+ +L +GL+ R I+ L G E GY+Q V V I Sbjct: 198 HLSLGDVR-FEPKSALVAAENGLADIRHISTHAPHFLLDGGWLLFEHGYDQGVAVRTILR 256 Query: 241 SRKLFLVNAFKDYGGNDRVL 260 + +DY G+DRV Sbjct: 257 DLGYQNIITEQDYAGHDRVT 276 >gi|110798817|ref|YP_696881.1| HemK family methyltransferase [Clostridium perfringens ATCC 13124] gi|168210132|ref|ZP_02635757.1| methyltransferase, HemK family [Clostridium perfringens B str. ATCC 3626] gi|110673464|gb|ABG82451.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Clostridium perfringens ATCC 13124] gi|170711816|gb|EDT23998.1| methyltransferase, HemK family [Clostridium perfringens B str. ATCC 3626] Length = 587 Score = 278 bits (712), Expect = 5e-73, Method: Composition-based stats. Identities = 70/263 (26%), Positives = 124/263 (47%), Gaps = 7/263 (2%) Query: 4 LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63 + D+ L +V +I + + N + + + ILG +F + Sbjct: 324 ILDTQLLLGKVLEKDKIWLITNKSEEVKKSDEIHFLNLLEKRKSKMPMQYILGTCEFMGL 383 Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 + PR +TE++V+ L I++ + + DL G+GA+ L+L Sbjct: 384 DFYVEEGVLIPRGDTEIIVEEVLN----NIDEDAEINVCDLCCGSGAIGLSLANYRKNII 439 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIV 180 VDI ++ + N +S+R ++SD S V +D++VSNPPYI + ++ Sbjct: 440 VDLVDIDDIPEKVTRKNIRELELSKRCGFIKSDLLSEVIKKGNKYDILVSNPPYIRTEVI 499 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 + L +V+D++P ++LDGG DGL YR I D L ++G+ + EIG++Q DV + Sbjct: 500 NTLMEDVKDYEPHLALDGGEDGLIFYRRIIDESLEILKENGILAFEIGHDQGEDVKNLMI 559 Query: 241 SRKLFLVNAFKDYGGNDRVLLFC 263 + + V KD G DR ++ Sbjct: 560 EKGYYDVKVIKDLAGLDRCVIGR 582 >gi|114561907|ref|YP_749420.1| modification methylase, HemK family protein [Shewanella frigidimarina NCIMB 400] gi|114333200|gb|ABI70582.1| modification methylase, HemK family protein [Shewanella frigidimarina NCIMB 400] Length = 284 Score = 278 bits (712), Expect = 5e-73, Method: Composition-based stats. Identities = 85/262 (32%), Positives = 133/262 (50%), Gaps = 8/262 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A D+ + L + + P+ L Q + I + + I+G R+F++ Sbjct: 27 AHVDAEALLLHCMNKNRSFLYTWPERQLTSEQFKAYSQMIAKRQSGTPVAHIIGEREFWS 86 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + ++ T PRP+TE+LV++AL + R ++LDLGTGTGA+ LAL E P + Sbjct: 87 LPFIVNESTLIPRPDTEILVETAL-----NLSVRHNAKVLDLGTGTGAIALALASERPKW 141 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181 + +D +A+E+AK+N ++E + +QSDWFS+VE FD+IVSNPPYI+ Sbjct: 142 RITAIDKVPEAVELAKANRGNLNLTE-VEIIQSDWFSAVEQRDFDLIVSNPPYIDEADEH 200 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P+ +L G +G + IA+ HL G +E GY Q + V Sbjct: 201 LHLGDVR-FEPQSALTAGNEGYADLYYIAEQARAHLLPGGYLLLEHGYEQAIKVREKLIE 259 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 V +D+G NDR L Sbjct: 260 LGYQNVATVRDFGSNDRCTLGQ 281 >gi|146283508|ref|YP_001173661.1| methyl transferase [Pseudomonas stutzeri A1501] gi|145571713|gb|ABP80819.1| methyl transferase [Pseudomonas stutzeri A1501] Length = 275 Score = 278 bits (712), Expect = 5e-73, Method: Composition-based stats. Identities = 88/262 (33%), Positives = 133/262 (50%), Gaps = 8/262 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A D+ L S+ + + + + R + E + ILG + F++ Sbjct: 19 ARLDAEWLLAAALNKSTSYLRTWSEREVPAECAERFAADLARRRQGEPVAYILGRQGFWS 78 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +++DT PRP+TELLV++AL ++ R+LDLGTGTGA+ LAL E P + Sbjct: 79 LELEVAADTLIPRPDTELLVETAL-----QLLSAAPARVLDLGTGTGAIALALATERPAW 133 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181 + GVD A+ +A+ N + G+ SDWF+ + G F +IVSNPPYI + Sbjct: 134 QVCGVDRVEAAVRLAERNRLRLGL-HNAAFTLSDWFAGLNGERFQMIVSNPPYIPASDPH 192 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 L +VR F+P+ +L G DGL RTI + HL G +E GY+Q V + S Sbjct: 193 LLQGDVR-FEPQSALIAGADGLDDIRTIIAQAAAHLQSGGWLLLEHGYDQAEAVRMLLLS 251 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 R V + D GG++R+ L Sbjct: 252 RGFEDVQSRLDLGGHERISLGR 273 >gi|160893850|ref|ZP_02074633.1| hypothetical protein CLOL250_01404 [Clostridium sp. L2-50] gi|156864502|gb|EDO57933.1| hypothetical protein CLOL250_01404 [Clostridium sp. L2-50] Length = 292 Score = 278 bits (712), Expect = 5e-73, Method: Composition-based stats. Identities = 79/263 (30%), Positives = 128/263 (48%), Gaps = 3/263 (1%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 A D+ V+ I++ + + R I + K + I G + F Sbjct: 32 DADIDAELLWLFVSKQDKMAYIMNRQEDVTETIRSSYEALIDKRSKRIPLQYITGIQCFM 91 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 + D PR +TE+LV+ A L + D + +LD+ G+G + L++ + Sbjct: 92 GYDFETAPDVLIPRFDTEVLVEQA--NRLIQDIHSDKMSVLDMCCGSGCIGLSVALMNQD 149 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181 DIS A+ + NA VS+ + ++SD F ++ +D+I+SNPPYIES ++D Sbjct: 150 IHIDLCDISDSAIALTTKNAKRLEVSD-YTVIKSDLFDKIDKRYDMILSNPPYIESKVID 208 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 L EVRD++PR++LDG DGL YR I + +LN+ G EIG +Q DV ++ Sbjct: 209 GLMPEVRDYEPRLALDGDADGLKFYRAIIENAESYLNEKGYILFEIGNHQAHDVQQLLVD 268 Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264 + V KD NDRV++ + Sbjct: 269 KHFEDVRVVKDLAENDRVVIGRK 291 >gi|15896139|ref|NP_349488.1| S-adenosylmethionine-dependent methyltransferase, HEMK ortholog [Clostridium acetobutylicum ATCC 824] gi|15025933|gb|AAK80828.1|AE007786_1 S-adenosylmethionine-dependent methyltransferase, HEMK ortholog [Clostridium acetobutylicum ATCC 824] gi|325510293|gb|ADZ21929.1| S-adenosylmethionine-dependent methyltransferase [Clostridium acetobutylicum EA 2018] Length = 285 Score = 278 bits (712), Expect = 5e-73, Method: Composition-based stats. Identities = 74/264 (28%), Positives = 123/264 (46%), Gaps = 7/264 (2%) Query: 4 LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63 + DS L V +I + + +++ + I K I I +F + Sbjct: 23 MEDSQILLSYVLKKDRIFLITNREYEIEENSLKQYFDYINMRKKKMPIRYITEKCEFMGL 82 Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 + PRP+TE+LV++ L + IE + ++ D+ TG+GA+ L++ K + + Sbjct: 83 DFHVEKGVLIPRPDTEILVEAVLEY----IELNNYKKVCDVCTGSGAIGLSIAKYAKDVE 138 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIV 180 + DIS A+ ++K N + +R D FD++VSNPPYI + Sbjct: 139 VLCSDISPDAIRVSKINRQGLNLEDRVKIENGDLLEKPIERGEKFDIVVSNPPYIREDEI 198 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 L +V+D++P I+L GG DGL YR I + L GL + EIG ++ +V I E Sbjct: 199 PKLMDDVKDYEPIIALVGGEDGLDFYRRITSMSKKVLKPGGLIAYEIGSDEANEVSNILE 258 Query: 241 SRKLFLVNAFKDYGGNDRVLLFCR 264 + + KD+ DRV+L R Sbjct: 259 NEGFVSIETRKDFARMDRVVLAVR 282 >gi|261400801|ref|ZP_05986926.1| protein-(glutamine-N5) methyltransferase [Neisseria lactamica ATCC 23970] gi|269209402|gb|EEZ75857.1| protein-(glutamine-N5) methyltransferase [Neisseria lactamica ATCC 23970] Length = 273 Score = 278 bits (712), Expect = 5e-73, Method: Composition-based stats. Identities = 88/263 (33%), Positives = 122/263 (46%), Gaps = 12/263 (4%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 ++ L V+ + Q++ + D R R L E + ILG R+FY Sbjct: 13 PKNEARMLLQYVSEYTRVQLLTRGGEEMPDEVRQRADRLAQRRLNGEPVAYILGVREFYG 72 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 R T++ PRPETE LV++ LA + R+ DLGTG+G V + + E P Sbjct: 73 RRFTVNPSVLIPRPETEHLVEAVLARL------PENGRVWDLGTGSGTVAVTVALERPDA 126 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS---SVEGLFDVIVSNPPYIESVI 179 DIS ALE A+ NA G R + WF EG +D+IVSNPPYIE+ Sbjct: 127 FVRASDISPPALETARKNAADLGA--RVEFAHGSWFDTDMPSEGKWDIIVSNPPYIENGD 184 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 L ++R F+P+I+L DGLS RT+A G L + G +E G++Q V + Sbjct: 185 KHLLQGDLR-FEPQIALTDFSDGLSCIRTLAQGAPDRLAEGGFLLLEHGFDQGAAVRGVL 243 Query: 240 ESRKLFLVNAFKDYGGNDRVLLF 262 V D G DRV L Sbjct: 244 AENGFSGVETLPDLAGLDRVTLG 266 >gi|165924032|ref|ZP_02219864.1| protein methyltransferase HemK [Coxiella burnetii RSA 334] gi|212219473|ref|YP_002306260.1| peptide release factor-glutamine N5-methyltransferase [Coxiella burnetii CbuK_Q154] gi|165916517|gb|EDR35121.1| protein methyltransferase HemK [Coxiella burnetii RSA 334] gi|212013735|gb|ACJ21115.1| peptide release factor-glutamine N5-methyltransferase [Coxiella burnetii CbuK_Q154] Length = 277 Score = 278 bits (712), Expect = 5e-73, Method: Composition-based stats. Identities = 79/263 (30%), Positives = 126/263 (47%), Gaps = 9/263 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 D+ L V S + P+ L+ Q+ L+ + R LK E I ILG ++F++ Sbjct: 22 PRLDAELLLECVLKKSRADLFAYPEIQLNSSQQKTLSAYVKRRLKGEPIAYILGQKEFWS 81 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L ++ D PRPETE+LV+ L + K + +RI DLGTG+GAV LA+ E P + Sbjct: 82 LNLKVTPDVLIPRPETEMLVEWILK----NLPKDEKLRIADLGTGSGAVALAIAVERPHW 137 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181 D S AL+IA+ NA + + + Q +W ++ + IV NPPYI Sbjct: 138 TIDATDNSQAALKIAEINAKQHEIK-NCNFYQGEWCQALPRRDYHAIVGNPPYIPDKDQH 196 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +PR +L G DGLS + I +L G +E GY+Q ++ + ++ Sbjct: 197 LQQ---LKHEPREALAAGSDGLSAIKIIIHEAKSYLVNGGWLLLEHGYDQAEKIMTLMQA 253 Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264 + +D G R+++ R Sbjct: 254 DGYREITDRRDLAGLSRMMVARR 276 >gi|261393389|emb|CAX51025.1| putative protein methyltransferase HemK (protein-glutamine N-methyltransferase HemK; protein-(glutamine-N5) MTase HemK; M.StyLTHemKP) [Neisseria meningitidis 8013] Length = 423 Score = 278 bits (712), Expect = 6e-73, Method: Composition-based stats. Identities = 88/263 (33%), Positives = 122/263 (46%), Gaps = 12/263 (4%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 ++ L V+ + Q++ + D R R L E + ILG R+FY Sbjct: 163 PKNEARMLLQYVSEYTRVQLLTRGGEEMPDEVRQRADRLAQRRLNGEPVAYILGVREFYG 222 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 R T++ PRPETE LV++ LA + R+ DLGTG+GAV + + E P Sbjct: 223 RRFTVNPSVLIPRPETEHLVEAVLARL------PENGRVWDLGTGSGAVAVTVALERPDA 276 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS---SVEGLFDVIVSNPPYIESVI 179 DIS ALE A+ NA G R + WF EG +D+I SNPPYIE+ Sbjct: 277 FVRTSDISTPALETARKNAADLGA--RVEFAHGSWFDTDMPSEGKWDIIASNPPYIENGD 334 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 L ++R F+P+I+L DGLS RT+A G L + G +E G++Q V + Sbjct: 335 KHLLQGDLR-FEPQIALTDFSDGLSCIRTLAQGAPDRLAEGGFLLLEHGFDQGAAVRGVL 393 Query: 240 ESRKLFLVNAFKDYGGNDRVLLF 262 V D G DRV L Sbjct: 394 AENGFSGVETLPDLAGLDRVTLG 416 >gi|148359877|ref|YP_001251084.1| protein methyltransferase HemK [Legionella pneumophila str. Corby] gi|296107927|ref|YP_003619628.1| HemK protein [Legionella pneumophila 2300/99 Alcoy] gi|148281650|gb|ABQ55738.1| protein methyltransferase HemK [Legionella pneumophila str. Corby] gi|295649829|gb|ADG25676.1| HemK protein [Legionella pneumophila 2300/99 Alcoy] Length = 287 Score = 278 bits (712), Expect = 6e-73, Method: Composition-based stats. Identities = 83/264 (31%), Positives = 131/264 (49%), Gaps = 7/264 (2%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 + ++ LC V + + PD+++ Q I + + I I G R+F+ Sbjct: 21 ETKLEAELLLCHVLNKNRAYLFAHPDALVSPEQIETYLQMIKQRAEGLPIAYITGQREFW 80 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 ++ L ++ + PR ETE LV+ AL I ++ V +L+LGTG+GA+ LAL KE P Sbjct: 81 SLSLKVTPNVLIPRHETERLVELALEL----IPDKENVSVLELGTGSGAIALALAKERPL 136 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIV 180 + D S +ALE+A+ NA T G+ + S WF+++ + IVSNPPYI Sbjct: 137 WHIDACDFSKEALELARYNAKTLGL-NNINFCHSYWFNNLPLKQYHAIVSNPPYIAENDP 195 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 +VR F+P +L DGL+ + I +L DGL VE G+ QK ++ I Sbjct: 196 HLKKGDVR-FEPTSALVSSQDGLADLQYIIQHSYEYLLPDGLLLVEHGFEQKNEISAILN 254 Query: 241 SRKLFLVNAFKDYGGNDRVLLFCR 264 ++ ++D G+DRV R Sbjct: 255 QLGYKNIHCWQDLQGHDRVSGGQR 278 >gi|294670647|ref|ZP_06735523.1| hypothetical protein NEIELOOT_02370 [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291307617|gb|EFE48860.1| hypothetical protein NEIELOOT_02370 [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 271 Score = 278 bits (712), Expect = 6e-73, Method: Composition-based stats. Identities = 88/263 (33%), Positives = 125/263 (47%), Gaps = 13/263 (4%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 ++ L VTG + Q+I +LD+ Q L R L E + ILGWR+FY R Sbjct: 16 EARMLLQAVTGWTRAQLITRDGEMLDEGQTADLQAMQQRRLNGEPMAYILGWREFYGRRF 75 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 + T PRPETE LV++AL P+ + DLGTG+GAV + L E P + Sbjct: 76 RTTPATLIPRPETEHLVEAALQHLPPQ------GLVWDLGTGSGAVAVTLACERPDASVL 129 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS----SVEGLFDVIVSNPPYIESVIVD 181 DIS AL +A+ NA NG WF S + FD++VSNPPYIE+ Sbjct: 130 ASDISPAALAVARQNAADNGAD--VSFACGSWFDIDRPSEKHGFDLLVSNPPYIEADDGH 187 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 ++R F+P +L DGLS R +A + +L G +E G+NQ V +I + Sbjct: 188 LQQGDLR-FEPANALTDFSDGLSCIRELAAHGAEYLKPGGRLIMEHGWNQGAAVRQILAA 246 Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264 + D G +R+ + Sbjct: 247 AGWTEIETQTDLAGLERITQGRK 269 >gi|261381287|ref|ZP_05985860.1| protein-(glutamine-N5) methyltransferase [Neisseria subflava NJ9703] gi|284795767|gb|EFC51114.1| protein-(glutamine-N5) methyltransferase [Neisseria subflava NJ9703] Length = 270 Score = 278 bits (712), Expect = 6e-73, Method: Composition-based stats. Identities = 84/264 (31%), Positives = 117/264 (44%), Gaps = 12/264 (4%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 ++ L G + Q++ L + L R LK E + +LG R+FY Sbjct: 13 PKNEARMLLQYALGYTRAQLVTRGTDDLAESDLQILEALAQRRLKGEPMAYLLGEREFYG 72 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 R T++ PR ETE LV++ L R+ DLGTG+GA+ + + E Sbjct: 73 RRFTVNPHVLIPRHETEHLVEAVLKRL------PSQGRVWDLGTGSGAIAVTIALERGDA 126 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS---SVEGLFDVIVSNPPYIESVI 179 DIS AL+ A+ NA G + + Q WF EG +DVIVSNPPYIE Sbjct: 127 DVRASDISVGALDTARQNAAELGA--KVEFAQGSWFDTDKPSEGRYDVIVSNPPYIEDGD 184 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 ++R F+P+ +L DGLSH R I ++L +G E GY+Q V I Sbjct: 185 EHLSQGDLR-FEPQNALTDFSDGLSHIRHITQEAPKYLKANGWLLFEHGYDQGKAVRNIM 243 Query: 240 ESRKLFLVNAFKDYGGNDRVLLFC 263 V +D G DRV L Sbjct: 244 LENGFAEVATEQDLAGLDRVTLGR 267 >gi|323143930|ref|ZP_08078588.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Succinatimonas hippei YIT 12066] gi|322416294|gb|EFY06970.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Succinatimonas hippei YIT 12066] Length = 273 Score = 278 bits (712), Expect = 6e-73, Method: Composition-based stats. Identities = 89/259 (34%), Positives = 129/259 (49%), Gaps = 13/259 (5%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A D+ L V +I + L +R + I R + E I ILG+++F+ Sbjct: 22 ARLDADLLLMEVLHCPRSYLITHDNEELKERAIVRFRDLISRRSRGEPIAYILGYKEFWG 81 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + ++ + PRP+TELLV++AL F + V +LDLGTG+GA+ L++ E P Sbjct: 82 LPFKVNRNVLIPRPDTELLVETALKF-------KQVKSVLDLGTGSGAIILSIKYERPDI 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181 + DIS AL++AK NA++ G+ +S WFS ++ FD+IVSNPPYIE Sbjct: 135 NALACDISDAALQVAKENALSLGLD--VTFFKSSWFSDIKNAKFDLIVSNPPYIEENDEH 192 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 + F+P +L G DGL R IA N G +E GYNQ DV I E Sbjct: 193 L---KALSFEPVGALISGKDGLDDIRIIAKDSRHFFNPGGALLLEHGYNQGKDVRNILEE 249 Query: 242 RKLFLVNAFKDYGGNDRVL 260 + +D G N+RV Sbjct: 250 CGFNEIKTLRDLGSNERVT 268 >gi|237799728|ref|ZP_04588189.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Pseudomonas syringae pv. oryzae str. 1_6] gi|331022583|gb|EGI02640.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Pseudomonas syringae pv. oryzae str. 1_6] Length = 277 Score = 278 bits (712), Expect = 6e-73, Method: Composition-based stats. Identities = 81/263 (30%), Positives = 127/263 (48%), Gaps = 7/263 (2%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A D L G + P+ ++ + R E + ILG + F+ Sbjct: 19 ARLDIELLLAAALGKPRSFLHTWPERIVSTEAALAFAGYLERRRAGEPVAYILGQQGFWK 78 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L ++ T PRPETE+LV++AL + ++LDLGTGTGA+ LAL E + Sbjct: 79 LDLEVAPHTLIPRPETEMLVEAALEL----VPAFASAQVLDLGTGTGAIALALANERQQW 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181 K VD +A+ +A+ N + + + L S+WFS+++G FD+I+SNPPYI Sbjct: 135 KVTAVDRVPEAVALAERNRKRLHL-DNAEVLDSNWFSALQGRQFDLIISNPPYIADADPH 193 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P +L G DGL R I HLN +G +E GY+Q V + Sbjct: 194 LAAGDVR-FEPSSALVAGSDGLDDLREIIRQAPTHLNAEGWLLLEHGYDQGPAVRELLIR 252 Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264 + + +D G ++R+ C+ Sbjct: 253 QGFERIQTRRDLGEHERITFGCK 275 >gi|261821676|ref|YP_003259782.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Pectobacterium wasabiae WPP163] gi|261605689|gb|ACX88175.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Pectobacterium wasabiae WPP163] Length = 281 Score = 278 bits (712), Expect = 6e-73, Method: Composition-based stats. Identities = 87/262 (33%), Positives = 133/262 (50%), Gaps = 8/262 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 RD+ L VTG S V+ ++ L ++ LT + R E I ++G R+F++ Sbjct: 20 PKRDAEILLGFVTGKSRTFVLAFGETELRAAEQQQLTELLARRELGEPIAYLIGVREFWS 79 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +S T PRP+TE LV+ AL + +LDLGTGTGA+ LA+ E Sbjct: 80 LPLVVSPATLIPRPDTECLVEQALLRL-----PKKPCDVLDLGTGTGAIALAIASERHDC 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181 VGVD+ +A+ +A NA + + L W+S +E F +I SNPPYI++ V Sbjct: 135 LVVGVDLQPEAVALATKNAQQLRL-DNARFLPGSWYSPLEHRRFALIASNPPYIDADDVH 193 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P +L +GL+ R I + +L G +E G+ Q V ++ ++ Sbjct: 194 LSQGDVR-FEPASALVAADNGLADLRIIIESAPHYLEVGGWLLLEHGWQQGDAVRQLLQA 252 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 R + +DYGGNDRV L Sbjct: 253 RGFTQLETCQDYGGNDRVSLGR 274 >gi|121635723|ref|YP_975968.1| hemk protein [Neisseria meningitidis FAM18] gi|120867429|emb|CAM11201.1| hemk protein [Neisseria meningitidis FAM18] Length = 423 Score = 278 bits (711), Expect = 7e-73, Method: Composition-based stats. Identities = 85/263 (32%), Positives = 122/263 (46%), Gaps = 12/263 (4%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 ++ L + + Q++ + D R R L E + +LGWR+FY Sbjct: 163 PKNEARMLLQYASEYTRVQLLTRGGEEMPDEVRQRADRLAQRRLNGEPVAYLLGWREFYG 222 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 R ++ + PRPETE LV++ LA + R+ DLGTG+GAV + + E P Sbjct: 223 RRFAVNPNVLIPRPETEHLVEAVLARL------PENGRVWDLGTGSGAVAVTVALERPDA 276 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS---SVEGLFDVIVSNPPYIESVI 179 DIS +LE A+ NA G R + WF EG +D+IVSNPPYIE+ Sbjct: 277 FVRASDISPPSLETARKNAADLGA--RVEFAHGSWFDTDMPSEGKWDIIVSNPPYIENGD 334 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 ++R F+P+I+L DGLS RT+A G L + G +E G++Q V + Sbjct: 335 KHLSQGDLR-FEPQIALTDFSDGLSCIRTLAQGAPDRLAEGGFLLLEHGFDQGAAVRGVL 393 Query: 240 ESRKLFLVNAFKDYGGNDRVLLF 262 V D G DRV L Sbjct: 394 AENGFSGVETLPDLAGLDRVTLG 416 >gi|94971497|ref|YP_593545.1| HemK family modification methylase [Candidatus Koribacter versatilis Ellin345] gi|94553547|gb|ABF43471.1| [protein release factor]-glutamine N5-methyltransferase [Candidatus Koribacter versatilis Ellin345] Length = 280 Score = 278 bits (711), Expect = 7e-73, Method: Composition-based stats. Identities = 77/260 (29%), Positives = 119/260 (45%), Gaps = 10/260 (3%) Query: 7 SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66 + L + P+ L ++ AI R E I G ++FY Sbjct: 26 AELLLMFSLNCDRAYLFTYPERELTADEQARYDEAIARRCHGEPAQYITGHQEFYGRDFL 85 Query: 67 LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126 +S PRPETE L+++ L + + +LD+GTG+G + L KE P K Sbjct: 86 VSPAVLIPRPETEHLIEAVLELAPREVRW----EVLDVGTGSGCIAATLAKEFPRMKVTA 141 Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCLG 184 VDIS +AL+IA++NA + + + SD S++E FD+IVSNPPY+ D + Sbjct: 142 VDISPEALQIAQANAAR--LEAQVEFRVSDLLSAIEPGRQFDMIVSNPPYVGECEADKVQ 199 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 +V+DF+P ++ GG G+ + +A V HL G +EIGY+ V I Sbjct: 200 RQVKDFEPHCAVFGGERGMDIIKRLAPQVWEHLKPGGWFLMEIGYSIADPVHEIMRD--W 257 Query: 245 FLVNAFKDYGGNDRVLLFCR 264 D G RV++ + Sbjct: 258 TNFKVVPDLRGIPRVVVGRK 277 >gi|169335809|ref|ZP_02863002.1| hypothetical protein ANASTE_02235 [Anaerofustis stercorihominis DSM 17244] gi|169258547|gb|EDS72513.1| hypothetical protein ANASTE_02235 [Anaerofustis stercorihominis DSM 17244] Length = 279 Score = 278 bits (711), Expect = 7e-73, Method: Composition-based stats. Identities = 78/242 (32%), Positives = 123/242 (50%), Gaps = 5/242 (2%) Query: 21 QVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETEL 80 I D + L D + + + H I G ++F + + +T PRPETE+ Sbjct: 40 FFITDLNYELTDEEINEYEQLVNKRCAHVPFGYITGIKEFMGLDFHVDRETLIPRPETEI 99 Query: 81 LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140 +V+ + K + IL++G G+G + ++ K +GVDI+ KAL IA N Sbjct: 100 IVEYMIEHF-----KGITLDILEIGVGSGCISISTAKYLENVNILGVDINEKALSIANKN 154 Query: 141 AVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200 + V +R ++SD + +VEG FDVI+SNPPYI I++ L +V+ ++P ++LDGG Sbjct: 155 IEYHNVDDRVKFIRSDIYENVEGKFDVIISNPPYIRKDIIETLEDDVKKYEPILALDGGE 214 Query: 201 DGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 DGL YR I S++LN+ G EIGY+Q V + + D G DR + Sbjct: 215 DGLYFYREIIKNASKYLNESGHIIFEIGYDQGEQVKDLLIQNNFTNIEIINDLAGFDRTV 274 Query: 261 LF 262 + Sbjct: 275 VG 276 >gi|296313419|ref|ZP_06863360.1| protein-(glutamine-N5) methyltransferase [Neisseria polysaccharea ATCC 43768] gi|296840050|gb|EFH23988.1| protein-(glutamine-N5) methyltransferase [Neisseria polysaccharea ATCC 43768] Length = 273 Score = 278 bits (711), Expect = 7e-73, Method: Composition-based stats. Identities = 88/263 (33%), Positives = 123/263 (46%), Gaps = 12/263 (4%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 ++ L V+ + Q+++ + D R R L E + ILG R+FY Sbjct: 13 PKNEARMLLQYVSEYTRVQLLMRGGEEMPDEVRQRADRLAQRRLNGEPVAYILGVREFYG 72 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 R T++ PRPETE LV++ LA + R+ DLGTG+GAV + + E P Sbjct: 73 RRFTVNPSVLIPRPETEHLVEAVLARL------PENGRVWDLGTGSGAVAVTVALERPDA 126 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS---SVEGLFDVIVSNPPYIESVI 179 DIS ALE A+ NA G R + WF EG +D+IVSNPPYIE+ Sbjct: 127 FVRASDISPPALETARKNAADLGA--RVEFAYGSWFDTDMPSEGKWDIIVSNPPYIENGD 184 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 ++R F+P+I+L DGLS RT+A G L + G +E G++Q V + Sbjct: 185 KHLSQGDLR-FEPQIALTDFSDGLSCIRTLAQGAPDRLAEGGFLLLEHGFDQGAAVRGVL 243 Query: 240 ESRKLFLVNAFKDYGGNDRVLLF 262 V D G DRV L Sbjct: 244 AENGFSGVETLPDLAGLDRVTLG 266 >gi|241763795|ref|ZP_04761841.1| modification methylase, HemK family [Acidovorax delafieldii 2AN] gi|241366927|gb|EER61332.1| modification methylase, HemK family [Acidovorax delafieldii 2AN] Length = 284 Score = 278 bits (711), Expect = 8e-73, Method: Composition-based stats. Identities = 78/258 (30%), Positives = 118/258 (45%), Gaps = 8/258 (3%) Query: 6 DSHSFLCRVTGLS---SHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 D+ L ++ L + R E + + G ++FY Sbjct: 24 DAQMLLLHALARPEAGRAWLLAHDTDALAPEVQAQFLGLCQRRAAGEPVAYLTGRKEFYG 83 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L + + +PRP+TE LVD AL P + + RI+DLGTG+GA+ LAL + P Sbjct: 84 LPLCVDARVLDPRPDTETLVDWALEVIAPLSDPQHPPRIVDLGTGSGAIALALQHQRPTA 143 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182 + +GVD S AL +A++NA + +F +QS W + V+G+FD IVSNPPYI + Sbjct: 144 EVLGVDASPDALAVAQANAQRLVLPVQF--VQSHWLTGVDGVFDAIVSNPPYIPAHDPHL 201 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 +P +L G DGL R I RHL G +E G++Q V + ++ Sbjct: 202 ---AALTHEPLQALASGADGLQDIRQIVVQAPRHLKPGGWLLLEHGHDQAGAVSALLRAQ 258 Query: 243 KLFLVNAFKDYGGNDRVL 260 V + D G R Sbjct: 259 GFAQVQSRNDLAGIARCT 276 >gi|254520298|ref|ZP_05132354.1| modification methylase [Clostridium sp. 7_2_43FAA] gi|226914047|gb|EEH99248.1| modification methylase [Clostridium sp. 7_2_43FAA] Length = 587 Score = 278 bits (711), Expect = 8e-73, Method: Composition-based stats. Identities = 70/262 (26%), Positives = 123/262 (46%), Gaps = 7/262 (2%) Query: 4 LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63 + D+ L V +I + D + + I + I ILG +F + Sbjct: 326 ILDAQLLLGNVLAKDKLYIITNRDKNVSLKDEKEYFELIEKRKNKMPIKYILGETEFMGL 385 Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 + PR +TE+LV+ L+ I + D + + DL +G+GA+ +++ Sbjct: 386 DFNVEEGVLIPRGDTEILVEEVLSI----INEEDELNVCDLCSGSGAIGISIANYRKKIN 441 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS---SVEGLFDVIVSNPPYIESVIV 180 +D ++ K N + +G+ R ++SD + +DVIVSNPPYI++ + Sbjct: 442 VEEIDFYEVPEKVTKKNIIKHGLESRVKFIKSDLLKEPINQGKKYDVIVSNPPYIKADEI 501 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 L +V+ ++P +LDGG DGL Y+ I + LN +G+ + EIGY+Q +V + + Sbjct: 502 SNLMDDVKKYEPHTALDGGDDGLVFYKRIIEESKTTLNNEGVLAFEIGYDQGEEVSNLMK 561 Query: 241 SRKLFLVNAFKDYGGNDRVLLF 262 + + KD G DRV+L Sbjct: 562 EAGFYNIKLVKDLAGLDRVVLG 583 >gi|309379284|emb|CBX22057.1| unnamed protein product [Neisseria lactamica Y92-1009] Length = 273 Score = 278 bits (711), Expect = 8e-73, Method: Composition-based stats. Identities = 86/260 (33%), Positives = 123/260 (47%), Gaps = 12/260 (4%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 ++ L V+ + Q++ + D R R L E + +LGWR+FY R Sbjct: 16 EARMLLQYVSEYTRVQLLTRGGEEMPDEVRQRADRLAQRRLNGEPVAYLLGWREFYGRRF 75 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 ++ + PRPETE LV++ LA + R+ DLGTG+GAV + + E P Sbjct: 76 AVNPNVLIPRPETEHLVEAVLARL------PENGRVWDLGTGSGAVAVTVALERPDAFVC 129 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS---SVEGLFDVIVSNPPYIESVIVDC 182 DIS ALE A+ NA G + + WF EG +D+IVSNPPYIE+ Sbjct: 130 ASDISPSALETARKNAADLGAA--VEFAHGSWFDTDMPSEGKWDIIVSNPPYIENGDEHL 187 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 ++R F+P+I+L DGLS RT+A G L + G +E G++Q V + Sbjct: 188 SQGDLR-FEPQIALTDFSDGLSCIRTLAQGAPDRLAEGGFLLLEHGFDQGAAVRGVLAEN 246 Query: 243 KLFLVNAFKDYGGNDRVLLF 262 V D G DRV L Sbjct: 247 GFSGVETLPDLAGLDRVTLG 266 >gi|258513429|ref|YP_003189651.1| modification methylase, HemK family [Desulfotomaculum acetoxidans DSM 771] gi|257777134|gb|ACV61028.1| modification methylase, HemK family [Desulfotomaculum acetoxidans DSM 771] Length = 289 Score = 278 bits (711), Expect = 8e-73, Method: Composition-based stats. Identities = 79/270 (29%), Positives = 133/270 (49%), Gaps = 9/270 (3%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 A D+ L + G+ + + D VL + I R +K E + + G ++F Sbjct: 21 NASLDAEVLLMHLLGIERAGLYMRFDYVLTLEEAKAYRCLIERRVKGEPVAYLTGHKEFM 80 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 + ++ PRPETE+LV+ AL F + + + +LD+GTG+GA+ +++ + + Sbjct: 81 GMDFIVNPAVLVPRPETEILVERALKFL--EGKPGEELLVLDIGTGSGAIAVSMARMNSR 138 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS-----VEGLFDVIVSNPPYIE 176 + VD S AL +A+ NA +GV+ R D +EG D+I +N PY+ Sbjct: 139 LRVYAVDCSRDALVLAQHNAAIHGVAGRIHFFHGDLLYPLSNLALEGKADLIAANLPYVP 198 Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236 S + L ++VR ++P+I+L+GG+DGL YR + G L GL +EIG Q +V Sbjct: 199 SGDISGLPVDVRSYEPQIALNGGLDGLDIYRRLLPGAGDLLKSGGLLMLEIGPGQADVLV 258 Query: 237 RIFESRKLFLV--NAFKDYGGNDRVLLFCR 264 + + DY G +RV+L + Sbjct: 259 QEMTGMGMVWCCSEIVFDYAGRERVVLAEK 288 >gi|182623922|ref|ZP_02951710.1| methyltransferase, HemK family [Clostridium perfringens D str. JGS1721] gi|177910815|gb|EDT73169.1| methyltransferase, HemK family [Clostridium perfringens D str. JGS1721] Length = 587 Score = 277 bits (710), Expect = 8e-73, Method: Composition-based stats. Identities = 70/263 (26%), Positives = 124/263 (47%), Gaps = 7/263 (2%) Query: 4 LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63 + D+ L +V +I + + N + + + ILG +F + Sbjct: 324 ILDTQLLLGKVLEKDKIWLITNKSEEVKKSDEIHFLNLLEKRKLKMPMQYILGTCEFMGL 383 Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 + PR +TE++V+ L I++ + + DL G+GA+ L+L Sbjct: 384 DFYVEEGVLIPRGDTEIIVEEVLN----NIDEDAEINVCDLCCGSGAIGLSLANYRKNII 439 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIV 180 VDI ++ + N +S+R ++SD S V +D++VSNPPYI + ++ Sbjct: 440 VDLVDIDDIPEKVTRKNIRELELSKRCGFIKSDLLSEVIKKGNKYDILVSNPPYIRTEVI 499 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 + L +V+D++P ++LDGG DGL YR I D L ++G+ + EIG++Q DV + Sbjct: 500 NTLMEDVKDYEPHLALDGGEDGLIFYRRIIDESLEVLKENGILAFEIGHDQGEDVKNLMI 559 Query: 241 SRKLFLVNAFKDYGGNDRVLLFC 263 + + V KD G DR ++ Sbjct: 560 EKGYYDVKVIKDLAGLDRCVIGR 582 >gi|29655247|ref|NP_820939.1| peptide release factor-glutamine N5-methyltransferase [Coxiella burnetii RSA 493] gi|161830961|ref|YP_001596009.1| protein methyltransferase HemK [Coxiella burnetii RSA 331] gi|29542519|gb|AAO91453.1| peptide release factor-glutamine N5-methyltransferase [Coxiella burnetii RSA 493] gi|161762828|gb|ABX78470.1| protein methyltransferase HemK [Coxiella burnetii RSA 331] Length = 277 Score = 277 bits (710), Expect = 9e-73, Method: Composition-based stats. Identities = 78/263 (29%), Positives = 125/263 (47%), Gaps = 9/263 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 D+ L V S + P+ L+ Q+ L+ + R LK E I ILG ++F++ Sbjct: 22 PRLDAELLLECVLKKSRADLFAYPEIQLNSSQQKTLSAYVKRRLKGEPIAYILGQKEFWS 81 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L ++ D PRPETE+LV+ L + K + +RI DLGTG+GAV LA+ E P + Sbjct: 82 LNLKVTPDVLIPRPETEMLVEWILK----NLPKDEKLRIADLGTGSGAVALAIAVERPHW 137 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181 D S AL+IA+ NA + + + +W ++ + IV NPPYI Sbjct: 138 TIDATDNSQAALKIAEINAKQHEIK-NCNFYHGEWCQALPRRDYHAIVGNPPYIPDKDQH 196 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +PR +L G DGLS + I +L G +E GY+Q ++ + ++ Sbjct: 197 LQQ---LKHEPREALAAGSDGLSAIKIIIHEAKSYLVNGGWLLLEHGYDQAEKIMTLMQA 253 Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264 + +D G R+++ R Sbjct: 254 DGYREITDRRDLAGLSRMMVARR 276 >gi|325205014|gb|ADZ00468.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Neisseria meningitidis M01-240355] Length = 273 Score = 277 bits (710), Expect = 1e-72, Method: Composition-based stats. Identities = 88/260 (33%), Positives = 122/260 (46%), Gaps = 12/260 (4%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 ++ L V+ + Q++ + D R R L E + ILG R+FY R Sbjct: 16 EARMLLQYVSEYTRVQLLTRGGEEMPDEVRQRADRLAQRRLNGEPVAYILGVREFYGRRF 75 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 T++ PRPETE LV++ LA + R+ DLGTG+GAV + + E P Sbjct: 76 TVNPSVLIPRPETEHLVEAVLARL------PENGRVWDLGTGSGAVAVTVALERPDAFVR 129 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS---SVEGLFDVIVSNPPYIESVIVDC 182 DIS ALE A+ NA G R + WF EG +D+IVSNPPYIE+ Sbjct: 130 ASDISPPALETARKNAADLGA--RVEFAHGSWFDTDMPSEGKWDIIVSNPPYIENGDKHL 187 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 ++R F+P+I+L DGLS RT+A G L + G +E G++Q V + Sbjct: 188 SQGDLR-FEPQIALTDFSDGLSCIRTLAQGAPDRLAEGGFLLLEHGFDQGAAVRGVLAEN 246 Query: 243 KLFLVNAFKDYGGNDRVLLF 262 V D G DRV L Sbjct: 247 GFSGVETLPDLAGLDRVTLG 266 >gi|255658856|ref|ZP_05404265.1| protein-(glutamine-N5) methyltransferase [Mitsuokella multacida DSM 20544] gi|260849259|gb|EEX69266.1| protein-(glutamine-N5) methyltransferase [Mitsuokella multacida DSM 20544] Length = 291 Score = 277 bits (710), Expect = 1e-72, Method: Composition-based stats. Identities = 81/264 (30%), Positives = 128/264 (48%), Gaps = 3/264 (1%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 D+ L V + V D L + I + + + +ILG ++F Sbjct: 27 PRLDAEVLLAHVLEKQRIYLYVHFDEPLQPGELAAYREMIKKRVLRVPVAQILGEKEFMG 86 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + +++DT PRP+TE+LV +A+ L + + +R D+GTG+GA+CL++L Sbjct: 87 LTFKVTADTLVPRPDTEILVQAAVDR-LRAMAGEEPLRFADIGTGSGAICLSVLHYLSGT 145 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181 VDIS A +A+ NA + G+++R D + G+ F I+SNPPYI + Sbjct: 146 VADTVDISPAARAVAEENAASLGLADRITFHTGDLLQPLSGISFAAILSNPPYIPEADIA 205 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 L EVR +P +L GG DGL YR +A+ L G + E+G +Q DV + ++ Sbjct: 206 KLAPEVRLKEPHTALSGGQDGLDFYRRLANEAPAMLVPGGFTAFEVGIHQAGDVADLLKA 265 Query: 242 RKLFL-VNAFKDYGGNDRVLLFCR 264 L DY G DRV++ R Sbjct: 266 NPLIDRTEILPDYAGIDRVVVGWR 289 >gi|308390164|gb|ADO32484.1| hemk protein [Neisseria meningitidis alpha710] Length = 273 Score = 277 bits (709), Expect = 1e-72, Method: Composition-based stats. Identities = 88/263 (33%), Positives = 122/263 (46%), Gaps = 12/263 (4%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 ++ L V+ + Q++ + D R R L E + ILG R+FY Sbjct: 13 PKNEARMLLQYVSEYTRVQLLTRGGEEMPDEVRQRADRLAQRRLNGEPVAYILGVREFYG 72 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 R T++ PRPETE LV++ LA + R+ DLGTG+GAV + + E P Sbjct: 73 RRFTVNPSVLIPRPETEHLVEAVLARL------PENGRVWDLGTGSGAVAVTVALERPDA 126 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS---SVEGLFDVIVSNPPYIESVI 179 DIS ALE A+ NA G R + WF EG +D+IVSNPPYIE+ Sbjct: 127 FVRASDISTPALETARKNAADLGA--RVEFAHGSWFDTDMPSEGKWDIIVSNPPYIENGD 184 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 ++R F+P+I+L DGLS RT+A G L + G +E G++Q V + Sbjct: 185 KHLSQGDLR-FEPQIALTDFSDGLSCIRTLAQGAPDRLAEGGFLLLEHGFDQGAAVRGVL 243 Query: 240 ESRKLFLVNAFKDYGGNDRVLLF 262 V D G DRV L Sbjct: 244 AENGFSGVETLPDLAGLDRVTLG 266 >gi|18311185|ref|NP_563119.1| hypothetical protein CPE2203 [Clostridium perfringens str. 13] gi|18145868|dbj|BAB81909.1| conserved hypothetical protein [Clostridium perfringens str. 13] Length = 569 Score = 277 bits (709), Expect = 1e-72, Method: Composition-based stats. Identities = 70/263 (26%), Positives = 124/263 (47%), Gaps = 7/263 (2%) Query: 4 LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63 + D+ L +V +I + + N + + + ILG +F + Sbjct: 306 ILDTQLLLGKVLEKDKIWLITNKSEEVKKSDEIHFLNLLEKRKLKMPMQYILGTCEFMGL 365 Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 + PR +TE++V+ L I++ + + DL G+GA+ L+L Sbjct: 366 DFYVEEGVLIPRGDTEIIVEEVLN----NIDEDAEINVCDLCCGSGAIGLSLANYRKNII 421 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIV 180 VDI ++ + N +S+R ++SD S V +D++VSNPPYI + ++ Sbjct: 422 VDLVDIDDIPEKVTRKNIRELELSKRCGFIKSDLLSEVIKKGNKYDILVSNPPYIRTEVI 481 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 + L +V+D++P ++LDGG DGL YR I D L ++G+ + EIG++Q DV + Sbjct: 482 NTLMEDVKDYEPHLALDGGEDGLIFYRRIIDESLEVLKENGILAFEIGHDQGEDVKNLMI 541 Query: 241 SRKLFLVNAFKDYGGNDRVLLFC 263 + + V KD G DR ++ Sbjct: 542 EKGYYDVKVIKDLAGLDRCVIGR 564 >gi|262372380|ref|ZP_06065659.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Acinetobacter junii SH205] gi|262312405|gb|EEY93490.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Acinetobacter junii SH205] Length = 272 Score = 277 bits (709), Expect = 1e-72, Method: Composition-based stats. Identities = 83/262 (31%), Positives = 130/262 (49%), Gaps = 10/262 (3%) Query: 4 LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63 +++ L + G++S ++ + + L + Q N + R E + + G + F+ + Sbjct: 18 RQEAAWLLEHILGINSLELKLRLEQELTEIQEQAYLNGLARIDHGEPLAYVTGSQPFWTL 77 Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 L ++ DT PRP+TE+L+++ L L ++DLGTGTGA+ LAL E P +K Sbjct: 78 DLKVTHDTLVPRPDTEILIETVLKLELDSTSN-----VVDLGTGTGAIALALASERPQWK 132 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF-DVIVSNPPYIESVIVDC 182 DI LE+A+ NA+ +G++ WF ++E F D+IVSNPPYI+ V Sbjct: 133 VTATDIYQPTLEVAQENAIRHGLTH-VKFACGAWFDALEKQFFDLIVSNPPYIDPEDVHM 191 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 +P +L GL+ TI LN +G +E GY+Q V +FE Sbjct: 192 QM---LKSEPERALIADKQGLADLETIIVQGKSWLNPNGWIVLEHGYDQGEAVRTMFEKE 248 Query: 243 KLFLVNAFKDYGGNDRVLLFCR 264 + KDYGGNDRV L + Sbjct: 249 GFSQIQTIKDYGGNDRVSLGQK 270 >gi|291334338|gb|ADD93997.1| hemK protein [uncultured marine bacterium MedDCM-OCT-S11-C310] Length = 289 Score = 277 bits (709), Expect = 1e-72, Method: Composition-based stats. Identities = 80/259 (30%), Positives = 124/259 (47%), Gaps = 5/259 (1%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 D+ L R + ++ P+ V + + R E + ILG ++FY Sbjct: 26 PKLDAEILLARALDKNRSYLMTWPEKVPSNAVVSEFQRWLSRRADCEPVAYILGDQEFYG 85 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 +S PRPETE LV+ AL + R D +ILDL TG+G V L L E P Sbjct: 86 HLFQVSPAVLIPRPETEHLVEKALGWCRDR--GTDSPKILDLCTGSGCVGLTLALELPKA 143 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIESVIV 180 D+S +AL +A+ NA T+ V ER + D F S+ FD++++NPPY+E Sbjct: 144 SVTLTDLSPEALAVARHNADTHDVDERVRFFEGDLFESLPEGERFDLVLANPPYVEESFR 203 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 + +V D++P ++L DGL+ R I ++LN+ GL ++E+G Q V + Sbjct: 204 GEMQKDVLDYEPHLALFAQDDGLNLIREIVTQSPKYLNQPGLLAMEMGSGQSARVRSLL- 262 Query: 241 SRKLFLVNAFKDYGGNDRV 259 +D GG+DR+ Sbjct: 263 GPSWKNPGIIQDLGGHDRI 281 >gi|325129314|gb|EGC52151.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Neisseria meningitidis OX99.30304] gi|325135296|gb|EGC57917.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Neisseria meningitidis M0579] gi|325201297|gb|ADY96751.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Neisseria meningitidis M01-240149] gi|325208917|gb|ADZ04369.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Neisseria meningitidis NZ-05/33] Length = 273 Score = 277 bits (709), Expect = 1e-72, Method: Composition-based stats. Identities = 89/260 (34%), Positives = 123/260 (47%), Gaps = 12/260 (4%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 ++ L V+ + Q++ + D R R L E + ILG R+FY R Sbjct: 16 EARMLLQYVSEYTRVQLLTRGGEEMPDEVRQRADRLAQRRLNGEPVAYILGVREFYGRRF 75 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 T++ PRPETE LV++ LA + R+ DLGTG+GAV + + E P Sbjct: 76 TVNPSVLIPRPETEHLVEAVLARL------PENGRVWDLGTGSGAVAVTVALERPDAFVR 129 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS---SVEGLFDVIVSNPPYIESVIVDC 182 DIS ALE A+ NA G R + WF EG +D+IVSNPPYIE+ Sbjct: 130 ASDISTPALETARKNAADLGA--RVEFAHGSWFDTDMPSEGKWDIIVSNPPYIENGDKHL 187 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 L ++R F+P+I+L DGLS RT+A G L + G +E G++Q V + Sbjct: 188 LQGDLR-FEPQIALTDFSDGLSCIRTLAQGAPDRLAEGGFLLLEHGFDQGAAVRGVLAEN 246 Query: 243 KLFLVNAFKDYGGNDRVLLF 262 V D G DRV L Sbjct: 247 GFSGVETLPDLAGLDRVTLG 266 >gi|325107094|ref|YP_004268162.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Planctomyces brasiliensis DSM 5305] gi|324967362|gb|ADY58140.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Planctomyces brasiliensis DSM 5305] Length = 309 Score = 277 bits (709), Expect = 1e-72, Method: Composition-based stats. Identities = 73/262 (27%), Positives = 125/262 (47%), Gaps = 8/262 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 +S L Q+ + +V+ + R + + R ++ E + ++G ++FY+ Sbjct: 45 PRLESEILLAHAQKCPRIQLYANYHTVVSEETRAQMRELVKRRVRREPVAYLVGHKEFYS 104 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + + F PRPETE L++ L P + IL+L TG+G + + L K P Sbjct: 105 LEFAVEPGVFIPRPETETLINQGLEKLTPV----ERPHILELCTGSGCIAVTLAKRLPKA 160 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVI 179 + + V+ + L +++SNA + V +R L+ D F+ V FD+IVSNPPYI S Sbjct: 161 RVIAVEKNPIPLRVSRSNAEKHQVDDRVQILEGDLFAPVPTDGPRFDLIVSNPPYIRSDE 220 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 + L +VR+ +P +LDGG DGL R I ++L G +E+ Q I Sbjct: 221 IPGLVADVREHEPHAALDGGADGLDMIRVIIAQAPKYLKPGGWLMLEMDPAQIEATHDIA 280 Query: 240 ES-RKLFLVNAFKDYGGNDRVL 260 R+ A++D ++R + Sbjct: 281 RQSRQWTTQQAYRDLFEDERCI 302 >gi|319639481|ref|ZP_07994230.1| protein-(glutamine-N5) methyltransferase [Neisseria mucosa C102] gi|317399247|gb|EFV79919.1| protein-(glutamine-N5) methyltransferase [Neisseria mucosa C102] Length = 270 Score = 277 bits (709), Expect = 1e-72, Method: Composition-based stats. Identities = 84/264 (31%), Positives = 118/264 (44%), Gaps = 12/264 (4%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 ++ L + Q++ L + L R LK E + +LG R+FY Sbjct: 13 PKNEARMLLQYALSYTRAQLVTRGTDDLAESALQTLETLAQRRLKGEPMAYLLGEREFYG 72 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 R ++ PRPETE LV++ L P+ R+ DLGTG+GA+ + + E Sbjct: 73 RRFAVNPHVLIPRPETEHLVEAVLKRLPPQ------GRVWDLGTGSGAIAVTVALERVDA 126 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS---SVEGLFDVIVSNPPYIESVI 179 DIS AL+ A+ NA G + + Q WF EG +DVIVSNPPYIE Sbjct: 127 DVRASDISVGALDTARQNAAELGA--KVEFAQGSWFDTDRPSEGRYDVIVSNPPYIEDGD 184 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 ++R F+P+ +L DGLSH R I ++L +G E GY+Q V I Sbjct: 185 EHLSQGDLR-FEPQNALTDFSDGLSHIRHITQEAPKYLKANGWLLFEHGYDQGEAVRNIM 243 Query: 240 ESRKLFLVNAFKDYGGNDRVLLFC 263 V +D G DRV L Sbjct: 244 LENGFAEVATEQDLAGLDRVTLGR 267 >gi|320538899|ref|ZP_08038575.1| N5-glutamine methyltransferase, modifies release factors RF-1 and RF-2 [Serratia symbiotica str. Tucson] gi|320031059|gb|EFW13062.1| N5-glutamine methyltransferase, modifies release factors RF-1 and RF-2 [Serratia symbiotica str. Tucson] Length = 282 Score = 277 bits (709), Expect = 1e-72, Method: Composition-based stats. Identities = 87/262 (33%), Positives = 130/262 (49%), Gaps = 8/262 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 RD+ L VTG + ++ ++ L Q+ L +VR + E + ++G R+F++ Sbjct: 20 PRRDAEILLGFVTGRARTFLLAFDETRLTPHQQQQLEALLVRREQGEPVAYLVGEREFWS 79 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L++S T PRP++E LV AL ILDLGTGTGA+ LAL E P Sbjct: 80 LPLSVSPATLIPRPDSECLVALALERL-----PIASCHILDLGTGTGAIALALASERPDC 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVD 181 +GVD+ AL +A+ NA +S LQ +WFSS+ F +I SNPPYI++ Sbjct: 135 TVIGVDVQPDALALAQHNARKLTIS-NVQFLQGNWFSSLAPQHFALIASNPPYIDADDAH 193 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P +L GL+ I +HL G +E G+ Q V + + Sbjct: 194 LTQGDVR-FEPASALVAAQQGLADLDAIVRQAPQHLQPQGWLLLEHGWQQGRSVRALMLA 252 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 V ++DYG N+RV L Sbjct: 253 AGFMAVATYRDYGNNERVTLGQ 274 >gi|153956300|ref|YP_001397065.1| methyltransferase [Clostridium kluyveri DSM 555] gi|219856617|ref|YP_002473739.1| hypothetical protein CKR_3274 [Clostridium kluyveri NBRC 12016] gi|146349158|gb|EDK35694.1| Predicted methyltransferase [Clostridium kluyveri DSM 555] gi|219570341|dbj|BAH08325.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 288 Score = 276 bits (708), Expect = 1e-72, Method: Composition-based stats. Identities = 77/261 (29%), Positives = 123/261 (47%), Gaps = 8/261 (3%) Query: 4 LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63 + DS L + ++++ D + + + + + ILG +F + Sbjct: 27 ILDSQLLLGKAINKDRLFIVINADHKVTREEAEKYYYYLKLREEKMPVKYILGQCEFMGM 86 Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 + PRP+TE LV++AL I+ + I DL GTGA+ ++L K Sbjct: 87 DFIVKPGVLIPRPDTETLVENALE----EIDNNEFYNICDLCCGTGAIGISLAKFVEHIN 142 Query: 124 GVGVDISCKALEIAKSNAVTNG-VSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVI 179 V DIS A E+A+ N +++R ++SD + F++IV NPPYI+ + Sbjct: 143 VVCCDISDTACEVAEQNVRRYYSLNKRISIVKSDLMEYFILNKIKFNMIVCNPPYIKESV 202 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 +D L +V++++P +L GG DGL YR I + L K+G+ EIGY+QK DV I Sbjct: 203 IDTLMEDVKNYEPHEALSGGEDGLEFYRKIVKQSLKVLTKNGMLMFEIGYDQKKDVTSIL 262 Query: 240 ESRKLFLVNAFKDYGGNDRVL 260 KD G DRV+ Sbjct: 263 MKYGFKNTTCIKDLAGKDRVI 283 >gi|95929012|ref|ZP_01311757.1| modification methylase, HemK family [Desulfuromonas acetoxidans DSM 684] gi|95134913|gb|EAT16567.1| modification methylase, HemK family [Desulfuromonas acetoxidans DSM 684] Length = 293 Score = 276 bits (708), Expect = 1e-72, Method: Composition-based stats. Identities = 76/258 (29%), Positives = 121/258 (46%), Gaps = 2/258 (0%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 D+ + + + D L ++ + + R K E + I+G +F++ Sbjct: 26 PRLDAELLIGDALNKDRVGLYLCYDQPLQPQELTKIRQLVARRAKREPLQYIVGHTEFWS 85 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + ++ PR +TE+LV+ AL + +LD+GTG+GA+ +AL P Sbjct: 86 LPFKVAPGVLIPRGDTEILVEEALRLLEDNTTSQQP--VLDVGTGSGAIAVALAHSCPDL 143 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182 + VD+ +AL A++NA NGV+ER Q D G + ++VSNPPYI +D Sbjct: 144 QVEAVDLQPEALAQAQANAELNGVAERLSFRQQDMAVLSGGPYRLVVSNPPYIREDEMDG 203 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 L EVR+ +P ++L G DGL YR + + L G VE+G Q DV + Sbjct: 204 LMPEVREHEPAVALQAGSDGLDCYRLLCEQALNLLIPGGWLLVEVGAGQADDVAALMVRH 263 Query: 243 KLFLVNAFKDYGGNDRVL 260 L +DY G RV+ Sbjct: 264 GLPETFQREDYNGIVRVV 281 >gi|255525834|ref|ZP_05392763.1| modification methylase, HemK family [Clostridium carboxidivorans P7] gi|255510477|gb|EET86788.1| modification methylase, HemK family [Clostridium carboxidivorans P7] Length = 290 Score = 276 bits (708), Expect = 2e-72, Method: Composition-based stats. Identities = 78/275 (28%), Positives = 128/275 (46%), Gaps = 16/275 (5%) Query: 2 QALR---------DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIH 52 +ALR D L +V ++++ D + + N I + I Sbjct: 17 EALRSVGIDSYQIDCELLLGKVIKKDRLFILLNRDYKVTVNEEQEYCNFINLRKQKMPIK 76 Query: 53 RILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVC 112 ILG +F + + PRP+TE+LV+ A+ I+++ + D+ G+GA+ Sbjct: 77 YILGECEFMGLDFYIKEGVLIPRPDTEVLVELAIKC----IKEQKLKNACDVCCGSGAIG 132 Query: 113 LALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW---FSSVEGLFDVIV 169 +++ K K DIS A E+ N + + + ++SD F + + FD+I+ Sbjct: 133 ISIAKFVEDIKVKCSDISNIAYEVTLENIKRFELEHKVEVIKSDLLNYFINNKEKFDIII 192 Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY 229 SNPPYI ++ L +V++++P +L GG DGL YR I + LN +G EIGY Sbjct: 193 SNPPYIREDVIPTLMEDVKNYEPYEALSGGQDGLDFYRKITLQSLKLLNNNGFLLFEIGY 252 Query: 230 NQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 +QK V I E ++ KD G DRV+ R Sbjct: 253 DQKDSVSSILEQNGFTDISCIKDLAGKDRVIKGKR 287 >gi|163847181|ref|YP_001635225.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Chloroflexus aurantiacus J-10-fl] gi|222525022|ref|YP_002569493.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Chloroflexus sp. Y-400-fl] gi|163668470|gb|ABY34836.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Chloroflexus aurantiacus J-10-fl] gi|222448901|gb|ACM53167.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Chloroflexus sp. Y-400-fl] Length = 283 Score = 276 bits (708), Expect = 2e-72, Method: Composition-based stats. Identities = 80/262 (30%), Positives = 122/262 (46%), Gaps = 6/262 (2%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A D+ L + G S +V+ + D VL Q I R E + ++G R+F+ Sbjct: 21 ARLDAELLLAHILGWSRAKVVAERDHVLTPEQEMAFNALIERRANREPVAYLIGHREFFG 80 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L + PRPETELLV+ L + + + I D+GTG+GA+ +AL P Sbjct: 81 LDLFVDRRVLIPRPETELLVELTLKEA--QRFNHTPLIIADIGTGSGAIAIALAMHLPHA 138 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182 GVDIS AL +A N + +R L+ D + + D++VSNPPY +D Sbjct: 139 LIYGVDISPDALAVAAINVTRYRLDDRIRLLEGDLCTPLPAPVDILVSNPPYTILTEIDE 198 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 V +P ++LDGG DGL YR + +L +G +EIG Q VV + Sbjct: 199 ---GVYRHEPHLALDGGSDGLDCYRRLIAAAPTYLKPNGAILLEIGSTQAASVVHLLRQA 255 Query: 243 -KLFLVNAFKDYGGNDRVLLFC 263 + +D G+DR++ Sbjct: 256 LPMAETGIERDLAGHDRIVWAR 277 >gi|325143479|gb|EGC65800.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Neisseria meningitidis M01-240013] gi|325206969|gb|ADZ02422.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Neisseria meningitidis M04-240196] Length = 273 Score = 276 bits (708), Expect = 2e-72, Method: Composition-based stats. Identities = 88/263 (33%), Positives = 122/263 (46%), Gaps = 12/263 (4%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 ++ L V+ + Q++ + D R R L E + ILG R+FY Sbjct: 13 PKNEARMLLQYVSEYTRVQLLTRGGEEMPDEVRQRADRLAQRRLNGEPVAYILGVREFYG 72 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 R T++ PRPETE LV++ LA + R+ DLGTG+GAV + + E P Sbjct: 73 RRFTVNPSVLIPRPETEHLVEAVLARL------PENGRVWDLGTGSGAVAVTVALERPDA 126 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS---SVEGLFDVIVSNPPYIESVI 179 DIS ALE A+ NA G R + WF EG +D+I SNPPYIE+ Sbjct: 127 FVRTSDISTPALETARKNAADLGA--RVEFAHGSWFDTDMPSEGKWDIIASNPPYIENGD 184 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 L ++R F+P+I+L DGLS RT+A G L + G +E G++Q V + Sbjct: 185 KHLLQGDLR-FEPQIALTDFSDGLSCIRTLAQGAPDRLAEGGFLLLEHGFDQGAAVRGVL 243 Query: 240 ESRKLFLVNAFKDYGGNDRVLLF 262 V D G DRV L Sbjct: 244 AENGFSGVETLPDLAGLDRVTLG 266 >gi|206578511|ref|YP_002237909.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Klebsiella pneumoniae 342] gi|206567569|gb|ACI09345.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Klebsiella pneumoniae 342] Length = 282 Score = 276 bits (708), Expect = 2e-72, Method: Composition-based stats. Identities = 89/262 (33%), Positives = 132/262 (50%), Gaps = 8/262 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 RD+ L VTG + ++ ++ L + L + R + E I ++G R+F++ Sbjct: 20 PRRDAEILLGHVTGRARTWILAFGETTLSADEATTLEALLQRRQRGEPIAHLIGQREFWS 79 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +S T PRP+TE LV+ ALA LP + RILDLGTGTGA+ LAL E P Sbjct: 80 LPLFVSPATLIPRPDTECLVEQALAR-LPAVPC----RILDLGTGTGAIALALASERPDC 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181 + VD+ A+ +A NA ++ QSDWFS++ G F +IVSNPPYI++ Sbjct: 135 EVTAVDVMPDAVALALRNAAHLDIA-NVTIRQSDWFSALAGQRFAMIVSNPPYIDAADPH 193 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P +L GL+ I ++L G +E G+ Q V +F Sbjct: 194 LAEGDVR-FEPLTALVAADQGLADLAQIIREGRQYLLPGGWMLLEHGWTQGEAVRALFRE 252 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 V +DYG N+R+ L Sbjct: 253 AGYLDVATCRDYGDNERLTLGR 274 >gi|260426432|ref|ZP_05780411.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Citreicella sp. SE45] gi|260420924|gb|EEX14175.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Citreicella sp. SE45] Length = 282 Score = 276 bits (708), Expect = 2e-72, Method: Composition-based stats. Identities = 92/262 (35%), Positives = 123/262 (46%), Gaps = 11/262 (4%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 A RD+ L V G++ ++ + + I R E + + G R+FY Sbjct: 22 DAARDARRLLAHVLGVAPGRLTLVLPDPVGAGAAGRYETLIARRAAREPVSHLTGRREFY 81 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 ++SD +PRPETE LV AL+ R+LDLGTGTG + L LL E Sbjct: 82 GRAFHVTSDVLDPRPETETLVAEALS--------APFARVLDLGTGTGCILLTLLAERAT 133 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESV 178 G+G D+S AL +A N G+ R Q WF ++ G FD+IVSNPPYI Sbjct: 134 ATGIGTDLSEAALAVATRNRDALGLDGRATLGQGSWFEALPEGSGPFDLIVSNPPYIALD 193 Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238 + L EVRD +P ++L G DGL+ YR I HL G VEIG Q V + Sbjct: 194 EMAGLSPEVRDHEPHMALTDGGDGLAAYRAITRDAPAHLAPGGRLMVEIGPTQGPAVAAL 253 Query: 239 FESRKLFLVNAFKDYGGNDRVL 260 L V +D G DRV+ Sbjct: 254 MTGAGLADVTVLQDLDGRDRVV 275 >gi|288934822|ref|YP_003438881.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Klebsiella variicola At-22] gi|288889531|gb|ADC57849.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Klebsiella variicola At-22] Length = 282 Score = 276 bits (707), Expect = 2e-72, Method: Composition-based stats. Identities = 89/262 (33%), Positives = 132/262 (50%), Gaps = 8/262 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 RD+ L VTG + ++ ++ L + L + R + E I ++G R+F++ Sbjct: 20 PRRDAEILLGHVTGRARTWILAFGETTLSADEATTLEALLQRRQRGEPIAHLVGQREFWS 79 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +S T PRP+TE LV+ ALA LP + RILDLGTGTGA+ LAL E P Sbjct: 80 LPLFVSPATLIPRPDTECLVEQALAR-LPAVPC----RILDLGTGTGAIALALASERPDC 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181 + VD+ A+ +A NA ++ QSDWFS++ G F +IVSNPPYI++ Sbjct: 135 EVTAVDVMPDAVALALRNAAHLDIA-NVTIRQSDWFSALAGQRFAMIVSNPPYIDAADPH 193 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P +L GL+ I ++L G +E G+ Q V +F Sbjct: 194 LAEGDVR-FEPLTALVAADQGLADLAQIIREGRQYLLPGGWMLLEHGWTQGEAVRALFRE 252 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 V +DYG N+R+ L Sbjct: 253 AGYLDVATCRDYGDNERLTLGR 274 >gi|291612729|ref|YP_003522886.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Sideroxydans lithotrophicus ES-1] gi|291582841|gb|ADE10499.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Sideroxydans lithotrophicus ES-1] Length = 286 Score = 276 bits (707), Expect = 2e-72, Method: Composition-based stats. Identities = 86/258 (33%), Positives = 130/258 (50%), Gaps = 7/258 (2%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A + L + ++ P+ VLD Q+ N + R L+ E + ILG R+F+ Sbjct: 26 ARIEVQCLLQNALKVPRSYLLAHPEQVLDATQQASYANLLQRRLQGEPVAHILGEREFFG 85 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + ++ T PRPETELLV+ AL RI R+LD+GTG+GA+ L++ P Sbjct: 86 LNFKVTPATLIPRPETELLVELAL----QRIPAHGHFRVLDMGTGSGAIALSIAHARPEA 141 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181 + V VD S ALE+A+ NAV G+ ++SDW+++++ + +IVSNPPYIE+ Sbjct: 142 EVVAVDASGAALEVARENAVRLGIR-NATFIRSDWYAALDDKRYGLIVSNPPYIETGDAH 200 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 ++R F+P +L G DG+ R I R L +E GY Q V + Sbjct: 201 LTQGDLR-FEPPSALASGADGMDDIRRIVGQAHRFLELGSWLLLEHGYEQAETVRLLLGQ 259 Query: 242 RKLFLVNAFKDYGGNDRV 259 V + KD G +RV Sbjct: 260 NGFANVFSVKDIAGIERV 277 >gi|296124206|ref|YP_003631984.1| modification methylase, HemK family [Planctomyces limnophilus DSM 3776] gi|296016546|gb|ADG69785.1| modification methylase, HemK family [Planctomyces limnophilus DSM 3776] Length = 307 Score = 276 bits (707), Expect = 2e-72, Method: Composition-based stats. Identities = 72/271 (26%), Positives = 131/271 (48%), Gaps = 9/271 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 D+ L Q+ D L + R + + + R + E + ++G R+F++ Sbjct: 35 PRLDAEVLLAHARQCHRIQLYTHYDEELTEEVRASMRDLVQRRARQEPVAYLVGEREFFS 94 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV------RILDLGTGTGAVCLALL 116 + ++++D PRP++E L+ A++ P RI+DL TG+G + + L Sbjct: 95 LSFSVNADVLIPRPDSETLIVEAISCLKPTPADDTASVASRSWRIVDLCTGSGCLAITLA 154 Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPY 174 ++ P + + D+S KAL +A+ N + +++R + Q +E FD+IVSNPPY Sbjct: 155 RQLPTAQLIATDLSDKALAVARQNLARHSLADRVELRQGSLLEPLENEPPFDLIVSNPPY 214 Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234 I + ++ L +VR +PR++LDGG DG+ R + ++HL G +E Q Sbjct: 215 IPTADIESLEEDVRRHEPRLALDGGADGMDLLRPLIAEGAKHLLPGGWMLLEFTSEQAPA 274 Query: 235 VVRIFESRK-LFLVNAFKDYGGNDRVLLFCR 264 ++ +++ LV KD RVL + Sbjct: 275 LMNYAQAQPDWSLVQVVKDLSQLPRVLKLQK 305 >gi|56460032|ref|YP_155313.1| hypothetical protein IL0924 [Idiomarina loihiensis L2TR] gi|56179042|gb|AAV81764.1| Protoporphyrinogen oxidase [Idiomarina loihiensis L2TR] Length = 281 Score = 276 bits (707), Expect = 2e-72, Method: Composition-based stats. Identities = 88/261 (33%), Positives = 134/261 (51%), Gaps = 10/261 (3%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 A D + LC V ++ P+ L Q+ I+ K + + I G R+F+ Sbjct: 19 DAAADVSALLCFVLDKEKTYLMTWPEKPLTQEQQRHYEECILARQKGKPVAHITGRREFW 78 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 ++ L +++ T PRP+TE LV++AL+ LP + R+LDLGTGTGAV LAL E P Sbjct: 79 SLMLEVNASTLIPRPDTETLVEAALSLELP-----ENARVLDLGTGTGAVALALKSERPG 133 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVI 179 ++ D S A+E+A+ N+ G+ + L S+WF SV FD+I+SNPPYI++ Sbjct: 134 WQVWACDKSGDAVELARRNSQALGL--NVEILCSNWFQSVPKSLKFDLILSNPPYIDAGD 191 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 +VR F+P+ +L +GL+ TI + HL G +E G+ Q V + Sbjct: 192 PHLSMGDVR-FEPQTALIAENNGLADIETIIKEANNHLADQGWLLLEQGWQQADSVAELL 250 Query: 240 ESRKLFLVNAFKDYGGNDRVL 260 VN ++DY DRV Sbjct: 251 FKSGYKKVNRWQDYARVDRVT 271 >gi|332800046|ref|YP_004461545.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Tepidanaerobacter sp. Re1] gi|332697781|gb|AEE92238.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Tepidanaerobacter sp. Re1] Length = 285 Score = 276 bits (707), Expect = 2e-72, Method: Composition-based stats. Identities = 82/268 (30%), Positives = 125/268 (46%), Gaps = 11/268 (4%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 DS L V G +++V + + +Q + + + I I+G ++FY Sbjct: 21 NPALDSELILGYVLGKDRLKLLVYDEMSITKQQLECFNDLLALRCQSTPIAYIIGRKEFY 80 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 + + PRPETE LV+ L I + I DL G+GA+ +A+ + Sbjct: 81 GLDFYIKPGVLIPRPETEFLVEETLNV----IYSIENPLIADLCCGSGAISVAVAVNNNR 136 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPYIES 177 + DIS A E+A +N +GV +R +Q D + E FDV+VSNPPYI Sbjct: 137 VRVYASDISDVACEVASTNIKLHGVQDRVSLMQGDLWMPFEEKNIRGFDVVVSNPPYIPK 196 Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237 + L +V++ +P+I+L+GG GL YR I L G EIG+NQ DV Sbjct: 197 EELSTLPDDVKN-EPQIALNGGTGGLEFYRRIVLRAPEFLKIGGRIIFEIGWNQARDVEI 255 Query: 238 IFESRKLFLVNAFKDYGGNDRVL--LFC 263 + + + KDY G DRV+ +FC Sbjct: 256 MLKETGFQDIKIIKDYAGFDRVISGVFC 283 >gi|257452576|ref|ZP_05617875.1| methyltransferase [Fusobacterium sp. 3_1_5R] gi|317059116|ref|ZP_07923601.1| methyltransferase [Fusobacterium sp. 3_1_5R] gi|313684792|gb|EFS21627.1| methyltransferase [Fusobacterium sp. 3_1_5R] Length = 368 Score = 276 bits (707), Expect = 2e-72, Method: Composition-based stats. Identities = 83/265 (31%), Positives = 134/265 (50%), Gaps = 7/265 (2%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDF 60 A D+ V ++ + + + + + Q+ L +++ K + + IL +F Sbjct: 105 NAKLDAEYIFADVLKVNRNMLSLYLHREISEEQKQELREKLIQRGKFRKPLQYILVKWEF 164 Query: 61 YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120 Y PR +TE+LV+ A SL +++ +ILD+GTGTGA+ + L KE P Sbjct: 165 YGYEFITDERALIPRADTEILVEQAKILSL----EKENPKILDIGTGTGAIAITLAKEVP 220 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVI 179 + +G+DIS +AL +AK N LQS+ F +EG FD+IVSNPPYI Sbjct: 221 EAEVLGIDISERALSLAKEN-KEYQFVRNVSFLQSNLFEKLEGKSFDIIVSNPPYIPQEE 279 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 + L EV++++P+ +L DG S Y+ I + +LN+ G E+GY Q V + Sbjct: 280 YEDLMPEVKNYEPKNALTDAGDGYSFYQRIIQEANDYLNEKGYLLFEVGYQQAKQVKQWM 339 Query: 240 ESRKLFLVNAFKDYGGNDRVLLFCR 264 E K + +DY G+ RV+L + Sbjct: 340 EEEKFEDLYIAEDYAGHQRVVLGRK 364 >gi|330811718|ref|YP_004356180.1| methyltransferase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327379826|gb|AEA71176.1| Putative methyltransferase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 276 Score = 276 bits (707), Expect = 2e-72, Method: Composition-based stats. Identities = 83/249 (33%), Positives = 129/249 (51%), Gaps = 8/249 (3%) Query: 16 GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75 G S + P+ ++ + + R E + ILG + F+ + L ++ T PR Sbjct: 32 GKSRSFLHTWPERIVPSEAALLFSEYLRRRRSGEPVAYILGQQGFWKLDLEVAPHTLIPR 91 Query: 76 PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135 P+TELLV++ALA + R+LDLGTG+GA+ LAL E P +K VD +A+ Sbjct: 92 PDTELLVETALA-----LLPATPARVLDLGTGSGAIALALASERPAWKVTAVDRVLEAVA 146 Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194 +A+ N + L S WFS++E F++I+SNPPYI + + +VR F+P Sbjct: 147 LAERNRQRLDL-HNVTVLSSHWFSALEDTRFELIISNPPYIAASDPHLIEGDVR-FEPAS 204 Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYG 254 +L G DGL R I HL+ G +E GY+Q V + ++ V++ KD G Sbjct: 205 ALVAGPDGLDDLRQIVAQAPAHLDPGGWLMLEHGYDQAEAVRDLLRTQGFVEVHSRKDLG 264 Query: 255 GNDRVLLFC 263 G++R+ L C Sbjct: 265 GHERISLGC 273 >gi|257462415|ref|ZP_05626829.1| methyltransferase [Fusobacterium sp. D12] gi|317060079|ref|ZP_07924564.1| methyltransferase [Fusobacterium sp. D12] gi|313685755|gb|EFS22590.1| methyltransferase [Fusobacterium sp. D12] Length = 368 Score = 276 bits (707), Expect = 2e-72, Method: Composition-based stats. Identities = 83/265 (31%), Positives = 133/265 (50%), Gaps = 7/265 (2%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDF 60 A D+ V ++ + + + + ++++ L +++ K + + ILG +F Sbjct: 105 NAKLDAEYIFAEVLQVNRNMLKLYLHREIAEKEKQNLREKLIQRGKFRKPLQYILGKWEF 164 Query: 61 YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120 Y PR +TE+LV+ A SL +++ ILD+GTG+GA+ + L KE P Sbjct: 165 YGYEFITDERALIPRADTEILVEQAKILSL----EKENPSILDIGTGSGAIAITLAKEVP 220 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVI 179 + +G+D S KAL +AK N + LQSD F +++G FD+IVSNPPYI Sbjct: 221 EAEVLGIDKSEKALSLAKEN-KEYQLVRNVSFLQSDLFEALQGQRFDIIVSNPPYISQEE 279 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 + L EV+ ++P+ +L DG S Y+ I + HL K G E+GY Q V Sbjct: 280 YEDLMPEVKKYEPKNALTDEGDGYSFYQKIIQQANSHLQKKGYLLFEVGYQQAQQVKEWM 339 Query: 240 ESRKLFLVNAFKDYGGNDRVLLFCR 264 E + +DYGG+ RV+L + Sbjct: 340 EEENFEGIYIAEDYGGHQRVVLGRK 364 Score = 38.5 bits (89), Expect = 0.85, Method: Composition-based stats. Identities = 7/45 (15%), Positives = 19/45 (42%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK 47 + +S + V L + V+ D +L + ++ + + + K Sbjct: 22 SRLESEMLIADVLHLDRLSLYVNYDRMLQEEEKLEIKRYLYQMAK 66 >gi|325131308|gb|EGC54019.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Neisseria meningitidis M6190] gi|325137337|gb|EGC59925.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Neisseria meningitidis ES14902] Length = 273 Score = 276 bits (707), Expect = 2e-72, Method: Composition-based stats. Identities = 85/263 (32%), Positives = 122/263 (46%), Gaps = 12/263 (4%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 ++ L + + Q++ + D R R L E + +LGWR+FY Sbjct: 13 PKNEARMLLQYASEYTRVQLLTRGGEEMPDEVRQRADRLAQRRLNGEPVAYLLGWREFYG 72 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 R ++ + PRPETE LV++ LA + R+ DLGTG+GAV + + E P Sbjct: 73 RRFAVNPNVLIPRPETEHLVEAVLARL------PENGRVWDLGTGSGAVAVTVALERPDA 126 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS---SVEGLFDVIVSNPPYIESVI 179 DIS +LE A+ NA G R + WF EG +D+IVSNPPYIE+ Sbjct: 127 FVRASDISPPSLETARKNAADLGA--RVEFAHGSWFDTDMPSEGKWDIIVSNPPYIENGD 184 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 ++R F+P+I+L DGLS RT+A G L + G +E G++Q V + Sbjct: 185 KHLSQGDLR-FEPQIALTDFSDGLSCIRTLAQGAPDRLAEGGFLLLEHGFDQGAAVRGVL 243 Query: 240 ESRKLFLVNAFKDYGGNDRVLLF 262 V D G DRV L Sbjct: 244 AENGFSGVETLPDLAGLDRVTLG 266 >gi|322832985|ref|YP_004213012.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Rahnella sp. Y9602] gi|321168186|gb|ADW73885.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Rahnella sp. Y9602] Length = 289 Score = 276 bits (706), Expect = 2e-72, Method: Composition-based stats. Identities = 89/262 (33%), Positives = 127/262 (48%), Gaps = 8/262 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 RD+ L VTG + ++ +++L Q L + R + E + + G R+F++ Sbjct: 20 PKRDAEILLGFVTGRARTFIMAFGETLLTAGQLQQLEILLARREQGEPVAYLTGEREFWS 79 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L++S T PRP+TE LV+ AL V ILDLGTGTGA+ LAL E P Sbjct: 80 LPLSVSPATLIPRPDTECLVEQALIRL-----PSQPVSILDLGTGTGAIALALASERPDC 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181 K GVD+ A+ +A+ NA + L WFS V G F +I SNPPYI++ Sbjct: 135 KVTGVDLQPDAVRLAQHNAQKLNIL-NARFLPGSWFSPVAGERFALIASNPPYIDAADPH 193 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P +L GL+ I +L+K G +E G+ Q DV + Sbjct: 194 LAKGDVR-FEPASALVAENAGLADLAHIIQAAPAYLHKGGWLLLEHGWQQATDVQALLRD 252 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 + KDYG NDRV L Sbjct: 253 AGYQHIATVKDYGDNDRVSLGQ 274 >gi|284007354|emb|CBA72731.1| protein methyltransferase (protein-glutamine N-methyltransferase) [Arsenophonus nasoniae] Length = 256 Score = 276 bits (706), Expect = 2e-72, Method: Composition-based stats. Identities = 89/254 (35%), Positives = 142/254 (55%), Gaps = 7/254 (2%) Query: 11 LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70 + +TG + +I ++ L +Q+ L + +VR + E I ++ ++F+++ + +SS Sbjct: 1 MQYITGKTRTFLIAFGETELSVKQQQQLEHLLVRRARGEPIAYLVEEKEFWSLPIKVSSV 60 Query: 71 TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130 T PRP+TE LV+ AL + + V+ILDLGTGTGAV LAL E P + VGVDIS Sbjct: 61 TLIPRPDTECLVERAL----QLLSDKRAVKILDLGTGTGAVALALASECPQAQIVGVDIS 116 Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRD 189 A+ +A+ NA N + +S+WF+S+ FD+IVSNPPYI+ +VR Sbjct: 117 DAAITLAQLNA-DNLLINNVKFCKSNWFTSLPIQQFDMIVSNPPYIDECDPHLQQGDVR- 174 Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249 F+P+ +L GL+ + I + + +L +G +E G+ Q V ++F V Sbjct: 175 FEPKTALISANHGLADIQLIIEQSANYLANNGWLLLEHGWLQGRQVRQLFSCHHYQQVVT 234 Query: 250 FKDYGGNDRVLLFC 263 F+DYGGNDR+ + Sbjct: 235 FQDYGGNDRITVGQ 248 >gi|325127342|gb|EGC50277.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Neisseria meningitidis N1568] Length = 273 Score = 276 bits (706), Expect = 2e-72, Method: Composition-based stats. Identities = 88/260 (33%), Positives = 122/260 (46%), Gaps = 12/260 (4%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 ++ L V+ + Q++ + D R R L E + ILG R+FY R Sbjct: 16 EARMLLQYVSEYTRVQLLTRGGEEMPDEVRQRADRLAQRRLNGEPVAYILGVREFYGRRF 75 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 T++ PRPETE LV++ LA + R+ DLGTG+GAV + + E P Sbjct: 76 TVNPSVLIPRPETEHLVEAVLARL------PENGRVWDLGTGSGAVAVTVALERPDAFVR 129 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS---SVEGLFDVIVSNPPYIESVIVDC 182 DIS ALE A+ NA G R + WF EG +D+IVSNPPYIE+ Sbjct: 130 TSDISTPALETARKNAADLGA--RVEFAHGSWFDTDMPSEGKWDIIVSNPPYIENGDKHL 187 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 ++R F+P+I+L DGLS RT+A G L + G +E G++Q V + Sbjct: 188 SQGDLR-FEPQIALTDFSDGLSCIRTLAQGAPDRLAEGGFLLLEHGFDQGAAVRGVLAEN 246 Query: 243 KLFLVNAFKDYGGNDRVLLF 262 V D G DRV L Sbjct: 247 GFSGVETLPDLAGLDRVTLG 266 >gi|331270452|ref|YP_004396944.1| methyltransferase [Clostridium botulinum BKT015925] gi|329127002|gb|AEB76947.1| Methyltransferase [Clostridium botulinum BKT015925] Length = 282 Score = 276 bits (706), Expect = 3e-72, Method: Composition-based stats. Identities = 73/263 (27%), Positives = 121/263 (46%), Gaps = 7/263 (2%) Query: 4 LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63 + DS + +V +I++ D + + I + ILG +F + Sbjct: 23 MLDSQLLIQKVLKKDKLFIILNRDMEISSENQEEFFKLIKLRKDKMPVKYILGECEFMGL 82 Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 + PR +TE+LV+ + I + I D+ G+GA+ +++ K + Sbjct: 83 NFNVKKGVLIPRADTEILVEEVIK----EIRENGYNNICDVCCGSGAIGISIAKYINKTR 138 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL---FDVIVSNPPYIESVIV 180 DIS A+E+ KSN ++++ +SD + +DVIVSNPPYI+ ++ Sbjct: 139 VDCYDISDIAIEVTKSNINKLELNDKVYVYKSDLLDEAKKQNKMYDVIVSNPPYIKEDVI 198 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 L +V++++P I+L GG DGL Y I LN+ GL + EIGY+Q DV I Sbjct: 199 PTLMKDVKEYEPYIALCGGKDGLYFYNKITKDSVVFLNRGGLLAFEIGYDQGKDVEEILI 258 Query: 241 SRKLFLVNAFKDYGGNDRVLLFC 263 + KD G DRV++ Sbjct: 259 QNGFSNIRVIKDLAGLDRVVVGR 281 >gi|290508965|ref|ZP_06548336.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Klebsiella sp. 1_1_55] gi|289778359|gb|EFD86356.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Klebsiella sp. 1_1_55] Length = 282 Score = 276 bits (706), Expect = 3e-72, Method: Composition-based stats. Identities = 86/262 (32%), Positives = 128/262 (48%), Gaps = 8/262 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 RD+ L VTG + ++ ++ L + L + R + E I ++G R+F++ Sbjct: 20 PRRDAEILLGHVTGRARTWILAFGETTLSADEATTLEALLQRRQRGEPIAHLVGQREFWS 79 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +S T PRP+TE LV+ ALA ILDLGTGTGA+ LAL E P Sbjct: 80 LPLFVSPATLIPRPDTECLVEQALARL-----PAAPCHILDLGTGTGAIALALASERPDC 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181 + VD+ A+ +A NA ++ QSDWFS++ G F +IVSNPPYI++ Sbjct: 135 EVTAVDVMPDAVALALRNAAHLDIA-NVTIRQSDWFSALAGQRFAMIVSNPPYIDAADPH 193 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P +L GL+ I ++L G +E G+ Q V +F Sbjct: 194 LAEGDVR-FEPLTALVAADQGLADLAQIIREGRQYLLPGGWMLLEHGWTQGEAVRALFRE 252 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 V +DYG N+R+ L Sbjct: 253 AGYLDVATCRDYGDNERLTLGR 274 >gi|168334107|ref|ZP_02692320.1| modification methylase, HemK family protein [Epulopiscium sp. 'N.t. morphotype B'] Length = 281 Score = 276 bits (706), Expect = 3e-72, Method: Composition-based stats. Identities = 81/263 (30%), Positives = 125/263 (47%), Gaps = 8/263 (3%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 A RD+ L + +I++ D ++++ I R HE + I +++F Sbjct: 22 DATRDARLLLMHLLSCDRATLIINNDKLVEEEIVATYFKYIDRRKNHEPLQYITHYQEFM 81 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 + + + PR +TELLV+ +A + L++G G+G + ++LL Sbjct: 82 GLPFYVDQNVLIPRQDTELLVEKLIA-----LPWNHHPIGLEIGVGSGCISVSLLHYISN 136 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIV 180 V DIS AL+IA NA N R + SD F ++ FD IVSNPPYI + Sbjct: 137 LTMVCSDISQAALDIAAKNASINACIPRIKFVHSDLFXNIPQQKFDFIVSNPPYIPKCEM 196 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 + L EV DF+P +L DGL+ YR IA ++ + G+ + EIGYNQ DV +I E Sbjct: 197 NQLQPEVLDFEPAAALTDSGDGLAFYRAIATEAKKY--EIGILAFEIGYNQGPDVTKILE 254 Query: 241 SRKLFLVNAFKDYGGNDRVLLFC 263 + F DY RV++ Sbjct: 255 IEGYQNIQLFYDYNNKHRVIIAQ 277 >gi|261409697|ref|YP_003245938.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Paenibacillus sp. Y412MC10] gi|261286160|gb|ACX68131.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Paenibacillus sp. Y412MC10] Length = 296 Score = 276 bits (706), Expect = 3e-72, Method: Composition-based stats. Identities = 82/265 (30%), Positives = 130/265 (49%), Gaps = 5/265 (1%) Query: 1 MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60 M+ R++ L V GLS + + +R L AI R + I+G ++F Sbjct: 31 MEPQRNAQLLLEHVLGLSGTSYYMALTDPFPEGRRLALEEAITRKAEGVPAQYIIGEQEF 90 Query: 61 YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD-VVRILDLGTGTGAVCLALLKES 119 Y ++ PRPETELLV++ L + + D ++++D+GTG+GA+ + L +S Sbjct: 91 YGRPFDVTPAVLIPRPETELLVEAVLKYGQELTPQPDGGLKVVDIGTGSGAIAITLALQS 150 Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESV 178 + DIS ALE+A NA G + + Q + G+ D++VSNPPYI + Sbjct: 151 KGWDVFASDISPDALEVAARNAKKLGA--QVEFRQGNLLEPFAGMGPDILVSNPPYIPAE 208 Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238 ++ L EVRD++PR +LDGG DGL+ YR + + L + E+G Q DV + Sbjct: 209 DIEELQPEVRDYEPRTALDGGPDGLNPYRIMMAQLPFLSAPPRLIAFELGMGQAGDVAEL 268 Query: 239 FESRKLF-LVNAFKDYGGNDRVLLF 262 + + D G DR +L Sbjct: 269 LRKAGYWEEIVTVPDLAGIDRHVLG 293 >gi|91776826|ref|YP_546582.1| HemK family modification methylase [Methylobacillus flagellatus KT] gi|91710813|gb|ABE50741.1| [protein release factor]-glutamine N5-methyltransferase [Methylobacillus flagellatus KT] Length = 284 Score = 275 bits (705), Expect = 3e-72, Method: Composition-based stats. Identities = 88/264 (33%), Positives = 130/264 (49%), Gaps = 8/264 (3%) Query: 2 QALRDSHSFLCRVTG-LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60 +A + + + G + +I D + D R + + R ++ E + ILG R+F Sbjct: 25 EARIEIRALMQHSLGDVDHAWLIAHGDEAVTDALRARFESLLARRIEGEPVAHILGRREF 84 Query: 61 YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120 Y ++ DT PR +TE LV++AL RI ILD+GTGTGA+ + L E P Sbjct: 85 YGRDFIVTPDTLIPRSDTETLVEAALD----RIPVGQTCEILDMGTGTGAIGITLALERP 140 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVI 179 K VD S AL IA+ NA + L+SDWFS++ G FD+IVSNPPYIE+ Sbjct: 141 QAKVTIVDYSEAALAIARENARQLS-AHNVTALRSDWFSALGGRCFDLIVSNPPYIEAAD 199 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 ++R F+P +L G DGL R ++ + HL +G +E GY Q V + Sbjct: 200 PHLQQGDLR-FEPIAALASGADGLDDIRILSAQAADHLITNGWLMLEHGYQQGAAVRSLL 258 Query: 240 ESRKLFLVNAFKDYGGNDRVLLFC 263 + + D G++RV L Sbjct: 259 QQHGFANIGTATDLAGHERVTLGQ 282 >gi|224824643|ref|ZP_03697750.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Lutiella nitroferrum 2002] gi|224603136|gb|EEG09312.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Lutiella nitroferrum 2002] Length = 270 Score = 275 bits (705), Expect = 3e-72, Method: Composition-based stats. Identities = 92/264 (34%), Positives = 127/264 (48%), Gaps = 10/264 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 +S L +VTG + +++ P+ L Q R L E I +LG R+FY Sbjct: 13 PRLESRLLLMQVTGFTPAKLVGYPELELSPVQEAAFAALAERRLSGEPIAYLLGEREFYG 72 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 +S PRPETE LV++ALA R +++DLG G+GA+ + L E+P + Sbjct: 73 RLFLVSPAVLIPRPETEHLVEAALARV-----GRSPAQVVDLGCGSGAIAVTLALEAPHW 127 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIESVIV 180 + VD+S AL IA+ NA Q W++ + +FD+IVSNPPYI + Sbjct: 128 QVSAVDVSDAALAIARQNAARLMAP--VTFFQGSWYAPLPPAAVFDLIVSNPPYIAAADR 185 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 +VR F+PR +L DGLS R IA G L G VE GY+Q V +F Sbjct: 186 HLEQGDVR-FEPRRALTDEDDGLSCLREIAAGAPERLLPGGWLMVEHGYDQGDAVRALFH 244 Query: 241 SRKLFLVNAFKDYGGNDRVLLFCR 264 + L V D G DRV L R Sbjct: 245 AVGLAEVETLPDLAGLDRVTLGRR 268 >gi|170723616|ref|YP_001751304.1| protein-(glutamine-N5) methyltransferase [Pseudomonas putida W619] gi|169761619|gb|ACA74935.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Pseudomonas putida W619] Length = 276 Score = 275 bits (705), Expect = 3e-72, Method: Composition-based stats. Identities = 81/249 (32%), Positives = 125/249 (50%), Gaps = 8/249 (3%) Query: 16 GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75 G S + P+ ++ + R E + ILG + F+ + L ++ T PR Sbjct: 32 GKSRSYLHTWPERIVSSEDAQTYAGYLHRRRSGEPVAYILGQQGFWKLDLEVAPHTLIPR 91 Query: 76 PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135 P+TELLV++AL ++ ++LDLGTGTGA+ LAL E P ++ +D +A+ Sbjct: 92 PDTELLVETALE-----LQPATPAKVLDLGTGTGAIALALASECPAWQVTALDRVEEAVA 146 Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194 +A+ N G+ L S WFS+++G FD+I+SNPPYI + +VR F+P Sbjct: 147 LAERNRQRLGLG-NVKVLASHWFSALDGERFDLILSNPPYIAAEDPHLAAGDVR-FEPSS 204 Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYG 254 +L G DGL R I HL G +E GY+Q V + + V + KD G Sbjct: 205 ALVAGADGLDDLRLIVGQAPAHLLPGGWLLLEHGYDQAPAVRALLTGQGFIEVASRKDLG 264 Query: 255 GNDRVLLFC 263 G++R+ L Sbjct: 265 GHERISLGR 273 >gi|312897942|ref|ZP_07757355.1| protein-(glutamine-N5) methyltransferase [Megasphaera micronuciformis F0359] gi|310620976|gb|EFQ04523.1| protein-(glutamine-N5) methyltransferase [Megasphaera micronuciformis F0359] Length = 284 Score = 275 bits (705), Expect = 4e-72, Method: Composition-based stats. Identities = 86/263 (32%), Positives = 127/263 (48%), Gaps = 7/263 (2%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 D+ L V + D + + I + + ILG + F Sbjct: 26 PRLDAEILLAHVLEKERIYLYAHFDEPMTSTELSAYKEMIKKRAARYPVAHILGIKPFMG 85 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + ++ PRPETELLV++ L K VR+LD+GTG+GA+ L+LL P Sbjct: 86 LDFIVNEHVLVPRPETELLVEAVLEIC----PKEVPVRVLDMGTGSGAILLSLLSYLPQA 141 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181 G GVDIS AL+IA N+ + +R + SD F++VE +D +VSNPPY+ + + Sbjct: 142 TGTGVDISSDALKIAAENSEALHI-DRAQWVNSDLFTNVEAHEYDWLVSNPPYLTAPDMQ 200 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 L EV+ +DP+ +L GG DGL YR +A +L G C VE+G Q V +F Sbjct: 201 NLEKEVK-YDPKTALYGGTDGLDIYRRLASEGGAYLKVGGHCIVEVGAGQARQVAELFTE 259 Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264 + LV DY +R +L + Sbjct: 260 QDFELVRIINDYADTERHVLLRK 282 >gi|260888150|ref|ZP_05899413.1| protein-(glutamine-N5) methyltransferase [Selenomonas sputigena ATCC 35185] gi|330840017|ref|YP_004414597.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Selenomonas sputigena ATCC 35185] gi|260862179|gb|EEX76679.1| protein-(glutamine-N5) methyltransferase [Selenomonas sputigena ATCC 35185] gi|329747781|gb|AEC01138.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Selenomonas sputigena ATCC 35185] Length = 292 Score = 275 bits (705), Expect = 4e-72, Method: Composition-based stats. Identities = 81/265 (30%), Positives = 123/265 (46%), Gaps = 4/265 (1%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 D+ L V G + V D L+ + A+ + I G R+F Sbjct: 28 PRLDAEVLLSHVLGKERIYLYVHFDEPLEKEELAAFRKAVAERARRVPTAYITGRREFMG 87 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEK-RDVVRILDLGTGTGAVCLALLK-ESP 120 + +S T PRP+TE+LV++A+ E R +R D+GTGTGA+ L++LK S Sbjct: 88 LDFAVSRATLIPRPDTEILVEAAIERLGRLAENGRKPLRFADIGTGTGAIALSVLKYASE 147 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVI 179 VDIS AL IA+ NA G+S + D + + +D I+SNPPYI Sbjct: 148 DVAADAVDISGAALAIARENAERLGLSACVHFHEGDLLAPLSHAAYDAILSNPPYIPDAD 207 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 + L EVR ++P +L GG DG+ Y +A+ ++L G +VE G Q + + Sbjct: 208 FERLAPEVRSYEPMTALKGGADGMDFYARLAEAAPQYLRAGGFLAVEAGIGQAQKIRALA 267 Query: 240 ESRKLFLVNAFKDYGGNDRVLLFCR 264 + V D G +RV++ R Sbjct: 268 KE-PWGDVEILPDLAGIERVVVLWR 291 >gi|71909296|ref|YP_286883.1| modification methylase HemK [Dechloromonas aromatica RCB] gi|71848917|gb|AAZ48413.1| [protein release factor]-glutamine N5-methyltransferase [Dechloromonas aromatica RCB] Length = 270 Score = 275 bits (704), Expect = 4e-72, Method: Composition-based stats. Identities = 83/257 (32%), Positives = 123/257 (47%), Gaps = 8/257 (3%) Query: 4 LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63 D+ L TG S ++ P+ + + + R E + ++G +F Sbjct: 16 RLDARLLLQYATGCSHADLLARPEMPVIGPAYEQFQDWVARRAAGEPLAYLVGEAEFRGR 75 Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 +S PRPETE+L++ ALA ++ +++DLGTG+G V ++L ESP Sbjct: 76 VFQVSPAVLIPRPETEVLIELALA----KLPGLAAPKVVDLGTGSGIVAISLALESPAAT 131 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDC 182 V VD+S +A+ +A++NA G R D Q DWFS + G FD+IVSNPPY+ Sbjct: 132 VVAVDLSAEAISVARNNAGRLGA--RIDFRQGDWFSPLAGERFDLIVSNPPYVADGDPH- 188 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 L L F+P+++L G DGLS R I + HL G E GY+Q + + Sbjct: 189 LALNGLPFEPQMALTDGADGLSCIRHIVADAADHLAPGGWLLFEHGYDQGEASRNLLTAA 248 Query: 243 KLFLVNAFKDYGGNDRV 259 F D G DRV Sbjct: 249 GFKAAFTFPDLAGIDRV 265 >gi|220920162|ref|YP_002495463.1| modification methylase, HemK family [Methylobacterium nodulans ORS 2060] gi|219944768|gb|ACL55160.1| modification methylase, HemK family [Methylobacterium nodulans ORS 2060] Length = 299 Score = 275 bits (704), Expect = 4e-72, Method: Composition-based stats. Identities = 106/262 (40%), Positives = 154/262 (58%), Gaps = 3/262 (1%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A+RD+ L L S +++ D L+ R+ L+ A++R + E + RILG +F+ Sbjct: 30 AMRDARLLLIETLNLRSIDLVLAGDRELEAREAARLSAALLRRAEGEPVARILGAWEFWG 89 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + LS T PRP+TE +V++ALA L R +R+LDLGTG+G + +ALL E P Sbjct: 90 LPFRLSPATLVPRPDTETVVEAALALGLERT---APIRLLDLGTGSGCLLVALLSEWPCA 146 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182 G+G+D + +AL A+ NA NGV R +Q DW S+ G FDVIV+NPPYI S ++D Sbjct: 147 TGLGIDRAREALVTARDNADQNGVGARALWVQGDWAGSLRGPFDVIVANPPYIASRMIDG 206 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 L EVR DPR++LDGG DGL YR I + L G VEIGY+Q+ + + E+ Sbjct: 207 LADEVRVHDPRMALDGGSDGLDAYRVILGQAAVLLAPGGRLIVEIGYDQEEALRHLAEAA 266 Query: 243 KLFLVNAFKDYGGNDRVLLFCR 264 +L +V +D G+ R ++ R Sbjct: 267 RLQVVVVRRDLAGHPRAVVMAR 288 >gi|39933684|ref|NP_945960.1| modification methylase HemK family [Rhodopseudomonas palustris CGA009] gi|39647530|emb|CAE26051.1| putative protoporphyrinogen oxidase, hemK protein [Rhodopseudomonas palustris CGA009] Length = 289 Score = 275 bits (704), Expect = 4e-72, Method: Composition-based stats. Identities = 103/262 (39%), Positives = 142/262 (54%), Gaps = 3/262 (1%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A D+ + V GL +++ + +L + L + R L E + RILG R+F+ Sbjct: 26 AALDARLLVGEVAGLDLTGLLIQAERILTAEENEQLQSLAARRLGGEPVARILGMREFWG 85 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + LS+DT PRP+TE +V++ALA R RILD+GTGTGA+ LALL E P Sbjct: 86 LPFELSADTLVPRPDTETIVEAALAILAERSSLAP--RILDIGTGTGAILLALLHECPDA 143 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182 GV DIS AL A+ NA G+++R + D+ S++ G FD+IVSNPPYI + Sbjct: 144 VGVATDISLGALRTARGNAQRLGLADRACFVACDYASALCGPFDLIVSNPPYIPGNEIAA 203 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 L EVRD DPR +LDGG DGL YR I R L G+ VEIG Q+ DV + ++ Sbjct: 204 LDREVRDHDPRRALDGGDDGLDAYRKIIPESVRLLQPGGVLVVEIGQGQEGDVSALMQAS 263 Query: 243 KLFLVN-AFKDYGGNDRVLLFC 263 L + + D G R + Sbjct: 264 GLTVSDPFRPDLSGIFRAVTGR 285 >gi|291617196|ref|YP_003519938.1| HemK [Pantoea ananatis LMG 20103] gi|291152226|gb|ADD76810.1| HemK [Pantoea ananatis LMG 20103] Length = 344 Score = 275 bits (704), Expect = 4e-72, Method: Composition-based stats. Identities = 80/256 (31%), Positives = 127/256 (49%), Gaps = 8/256 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 RD+ L VTG S ++ +++L + Q L + R + E + ++G R+F++ Sbjct: 21 PKRDAEILLGFVTGKSRSWLVAFDETLLTEAQLQQLDVLLARRARGEPVAHLIGEREFWS 80 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L ++ T PRP+TE+LV+ ALA R+LD+GTG+GA+ LA+ E P Sbjct: 81 LPLQVNDATLIPRPDTEILVEQALAHL-----PESPARVLDMGTGSGAIALAIASERPDC 135 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVD 181 +GVD A+ +A+ NA + +QS WF+ + D+IVSNPPYI++ Sbjct: 136 DVIGVDRIPAAVALAQRNAAHLAIP-NATFIQSHWFAQITPARLDLIVSNPPYIDANDRH 194 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+PR +L GL+ R + + L G +E G+ Q V + + Sbjct: 195 LNEGDVR-FEPRSALVAEEAGLADLRLLIEQAINWLQPGGWLLLEHGWQQDEAVRHLMQQ 253 Query: 242 RKLFLVNAFKDYGGND 257 V DYGGN Sbjct: 254 HHYLSVATANDYGGNP 269 >gi|82700641|ref|YP_415215.1| N-6 adenine-specific DNA methylase [Brucella melitensis biovar Abortus 2308] gi|148560045|ref|YP_001259696.1| protein-(glutamine-N5) methyltransferase [Brucella ovis ATCC 25840] gi|256370268|ref|YP_003107779.1| hemK protein [Brucella microti CCM 4915] gi|82616742|emb|CAJ11827.1| SAM (and some other nucleotide) binding motif:N-6 Adenine-specific DNA methylase:N6 adenine-specific DNA methyltransferase, N [Brucella melitensis biovar Abortus 2308] gi|148371302|gb|ABQ61281.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Brucella ovis ATCC 25840] gi|256000431|gb|ACU48830.1| hemK protein [Brucella microti CCM 4915] Length = 283 Score = 275 bits (704), Expect = 4e-72, Method: Composition-based stats. Identities = 106/258 (41%), Positives = 150/258 (58%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 D+ + TG + ++ P+ ++ + L A+ R E +HRI+G R+FY + Sbjct: 18 LDARLLIEWATGATRLDLVSQPEKLIGSAEAEKLRAALERRAGGEPVHRIMGQREFYGLP 77 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 LS+ T EPRP+TE LV+ + I + +LD+GTGTGA+ ++LL G Sbjct: 78 FRLSAQTLEPRPDTEALVELVIPVLEQLIARHGTAEVLDMGTGTGAIIISLLHRFEHMHG 137 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184 +GVD++ AL A+ NA+ NGV ERF L+SDWFS+V G F +IVSNPPYI + L Sbjct: 138 IGVDVAEGALATARINAIDNGVGERFAGLKSDWFSNVSGKFHLIVSNPPYIPHAEIAGLS 197 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 EVR+ DP +LDGG DGL Y+ +A GV +L KDG+ +VEIG Q DV +F+S Sbjct: 198 REVREHDPLAALDGGPDGLDFYKALAQGVGAYLYKDGMVAVEIGAGQFQDVEALFKSTGF 257 Query: 245 FLVNAFKDYGGNDRVLLF 262 L D GG+ R +LF Sbjct: 258 SLAGEANDLGGHRRAMLF 275 >gi|225575053|ref|ZP_03783663.1| hypothetical protein RUMHYD_03142 [Blautia hydrogenotrophica DSM 10507] gi|225037723|gb|EEG47969.1| hypothetical protein RUMHYD_03142 [Blautia hydrogenotrophica DSM 10507] Length = 283 Score = 275 bits (704), Expect = 5e-72, Method: Composition-based stats. Identities = 82/260 (31%), Positives = 125/260 (48%), Gaps = 9/260 (3%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 D+ + V + + +S Q I + + F + Sbjct: 25 LDAWYLMEYVFEMDRAHYFLR-ESEEAGSQEEEYRRLISLRCGRIPLQHLTHQAWFMGLE 83 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 + PR +TE+LV+ A+ D R+LD+ TG+G + L++L + P KG Sbjct: 84 FYVDGRVLVPRQDTEILVEEAVRRL------EDGQRLLDMCTGSGCILLSILSQKPCCKG 137 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184 GVD+S ALE+A+ N ++ D QSD F+ + G +++IVSNPPYI + ++ L Sbjct: 138 TGVDLSADALEVARLNGRRLNITA--DFRQSDLFTDIGGRYEMIVSNPPYIPTGVIPTLE 195 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 EVR +DP ++LDGG DGLS YR I + S L G EIG++Q V + E+ Sbjct: 196 EEVRSYDPNLALDGGEDGLSFYRRIVEQASTRLEDGGWLLFEIGHDQGRCVRDMMENAGY 255 Query: 245 FLVNAFKDYGGNDRVLLFCR 264 + KD G DRV+L R Sbjct: 256 GELQVVKDLAGRDRVVLGRR 275 >gi|299139886|ref|ZP_07033058.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Acidobacterium sp. MP5ACTX8] gi|298598240|gb|EFI54406.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Acidobacterium sp. MP5ACTX8] Length = 280 Score = 275 bits (704), Expect = 5e-72, Method: Composition-based stats. Identities = 80/267 (29%), Positives = 127/267 (47%), Gaps = 9/267 (3%) Query: 4 LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63 RD+ + L V G ++ P+ LD Q R E + + G ++FY + Sbjct: 16 RRDAETLLAHVLGHPRAWLLAHPEEELDAAQAETFLGLAARRAAGEPLQYLTGVQEFYGL 75 Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 L ++ + PRPETE LV++ + ++ + R ++RI D+GTG+GA+ +AL Sbjct: 76 SLRVTPEVLIPRPETEHLVEAVILWATQFHDGR-ILRIADVGTGSGAIAIALATHLAGVA 134 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE------GLFDVIVSNPPYIES 177 V +D S AL +A+ NA G ER L++D + FD IVSNPPYI Sbjct: 135 LVAIDQSEGALAVAEENAHALGCRERITFLRNDLLKDLSSALPHYPPFDAIVSNPPYIPL 194 Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237 + +EV +P +L G DGL+ Y+ + L+ GL ++EIG+ Q+ + Sbjct: 195 GDAATMQVEVVQHEPHSALFAGDDGLAIYQRLIPQAHAALHPCGLLAMEIGFGQRPALEE 254 Query: 238 IFESRKLFLVNAFKDYGGNDRVLLFCR 264 + V DY G R++L R Sbjct: 255 LLVD--WSNVRFVDDYAGIPRIVLAER 279 >gi|237745911|ref|ZP_04576391.1| methyltransferase HemK MTase hemK [Oxalobacter formigenes HOxBLS] gi|229377262|gb|EEO27353.1| methyltransferase HemK MTase hemK [Oxalobacter formigenes HOxBLS] Length = 287 Score = 275 bits (704), Expect = 5e-72, Method: Composition-based stats. Identities = 94/257 (36%), Positives = 134/257 (52%), Gaps = 14/257 (5%) Query: 8 HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67 L G S ++I D VL D + +++ + R L+ E + I G R+FY + + Sbjct: 33 RILLEHALGFSRVKLITHSDHVLTDAEANAVSDVLARRLRGEPVAYITGIREFYGLPFAV 92 Query: 68 SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 + D PRPETELLVD ALA + R++DLGTG+GA+ +A+ P + Sbjct: 93 TPDVLIPRPETELLVDLALARL------PEGGRVVDLGTGSGAIAVAIAAMRPDAQVWAT 146 Query: 128 DISCKALEIAKSNAV---TNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDC 182 DIS KAL+IA+ NA NG S RF Q +W+ ++E FD+IVSNPPYI S Sbjct: 147 DISGKALDIARKNAASCLKNGQSVRFR--QGNWYEALEPGSRFDLIVSNPPYIHSADEHL 204 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 ++R F+P +L DGLS + D +L K G +E GYNQ V + + Sbjct: 205 RKGDLR-FEPLSALTDYTDGLSAMDILIDQAPAYLKKGGELLMEHGYNQSGAVRKKLVDK 263 Query: 243 KLFLVNAFKDYGGNDRV 259 K V ++KD G +RV Sbjct: 264 KYLQVQSWKDLAGIERV 280 >gi|148657628|ref|YP_001277833.1| HemK family modification methylase [Roseiflexus sp. RS-1] gi|148569738|gb|ABQ91883.1| modification methylase, HemK family [Roseiflexus sp. RS-1] Length = 285 Score = 275 bits (704), Expect = 5e-72, Method: Composition-based stats. Identities = 74/260 (28%), Positives = 120/260 (46%), Gaps = 7/260 (2%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 D+ L G S +V+ + D I+R E + ++G ++FY Sbjct: 28 PRLDAEVLLAHTLGWSRARVLSRLEEPFTDESLHQFRTLILRRAAREPVAYLVGRKEFYG 87 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + + PRPETE LVD+AL ++ R + I D+GTG+G + +AL P Sbjct: 88 LEFVVDRRVLVPRPETETLVDAALEWAKHR---PAPLVIADIGTGSGCIAVALAVHLPQA 144 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182 +D+S AL +A+ N + + V L D + + D++VSNPPY +++ Sbjct: 145 HIYAIDLSRDALAVARQNVIRHHVDASVTLLNGDLLAPLPQPVDLLVSNPPY---TVLNE 201 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 + VR +P ++LDGG DGL+ YR + L G +EIG Q VV + Sbjct: 202 VDPGVRMHEPHLALDGGSDGLAVYRRLFAAAPSALRPGGALMLEIGATQARAVVDLARQA 261 Query: 243 -KLFLVNAFKDYGGNDRVLL 261 ++ +D G DRV++ Sbjct: 262 FPEAVIRVRQDLAGRDRVVI 281 >gi|329121080|ref|ZP_08249711.1| protein-(glutamine-N5) methyltransferase [Dialister micraerophilus DSM 19965] gi|327471242|gb|EGF16696.1| protein-(glutamine-N5) methyltransferase [Dialister micraerophilus DSM 19965] Length = 288 Score = 275 bits (704), Expect = 5e-72, Method: Composition-based stats. Identities = 82/265 (30%), Positives = 135/265 (50%), Gaps = 8/265 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 D+ L V + + D + +++ + I + S+ ++G +DF Sbjct: 28 PRLDAELLLSYVLKKTRIYLYTDFEQIVNKNELKEFKKLIQNRINGFSVATLIGEKDFMG 87 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + ++ PRP+TE V+ + IE + + D+G G+GA+ + LK Sbjct: 88 FKFFVNDKVLIPRPDTETWVEKVIQIHKNDIE----LFVADIGCGSGAIICSFLKYCKNA 143 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIV 180 KGVG+DIS A+EI+K N + R + + D+F++++ FD I SNPPYI + + Sbjct: 144 KGVGIDISDDAIEISKKNIKNLSLENRIELRKGDFFNALKKGEKFDGIFSNPPYIPTDDI 203 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 + L EV++ +P I+LDGG DGL+ YR IA+ + LN G +VE+G +Q + V +FE Sbjct: 204 EFLQKEVKN-EPLIALDGGKDGLNFYRKIAENAEKFLNSGGFLAVEVGIHQSLIVKEMFE 262 Query: 241 SRKLF-LVNAFKDYGGNDRVLLFCR 264 S F KDYG +R + R Sbjct: 263 STGYFTDFEIIKDYGNIERAVYCIR 287 >gi|192289041|ref|YP_001989646.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Rhodopseudomonas palustris TIE-1] gi|192282790|gb|ACE99170.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Rhodopseudomonas palustris TIE-1] Length = 289 Score = 275 bits (704), Expect = 5e-72, Method: Composition-based stats. Identities = 102/259 (39%), Positives = 143/259 (55%), Gaps = 3/259 (1%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A D+ + V GL +++ + +L + L + R L+ E + RILG R+F+ Sbjct: 26 AALDARLLVGEVAGLDLTGLLIQAERILTAEENEQLQSFAARRLRGEPVARILGMREFWG 85 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + LS+DT PRP+TE +V++ALA R RILD+GTG+GA+ LALL E P Sbjct: 86 LPFELSADTLVPRPDTETIVEAALAILAERSSLAP--RILDIGTGSGAILLALLHECPDA 143 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182 GV DIS AL A+ NA G+++R + D+ S++ G FD+IVSNPPYI + Sbjct: 144 VGVATDISLGALRTARGNAQRLGLADRACFVACDYASALRGPFDLIVSNPPYIPGNEIAA 203 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 L EVRD DPR +LDGG DGL YR I R L G+ VEIG Q+ DV + ++ Sbjct: 204 LDREVRDHDPRRALDGGADGLDAYRKIIPESVRLLQPGGVLVVEIGQGQEGDVSALMQAS 263 Query: 243 KLFLVN-AFKDYGGNDRVL 260 L + + D G R + Sbjct: 264 GLTVSDPFRPDLSGIFRAV 282 >gi|254302819|ref|ZP_04970177.1| polypeptide chain release factor methyltransferase HemK [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148323011|gb|EDK88261.1| polypeptide chain release factor methyltransferase HemK [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 383 Score = 275 bits (704), Expect = 5e-72, Method: Composition-based stats. Identities = 81/266 (30%), Positives = 139/266 (52%), Gaps = 8/266 (3%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTN-AIVRSLKHESIHRILGWRDF 60 +L D+ V +S + + + + + + ++R+ K + + ILG +F Sbjct: 103 NSLLDAEYIFSDVLKVSRNTLKYSMSREIKEEDKDKIREMLVLRAKKRKPLQYILGEWEF 162 Query: 61 YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120 Y + +S PR +TE+LV+ + E ILD+GTG+GA+ +A+ E Sbjct: 163 YGLPFKVSEGVLIPRADTEILVEQCIQLMRDIEEPN----ILDIGTGSGAISIAIANELK 218 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESV 178 G+DI+ KAL++A N + N + E + ++S+ F ++ +D+IVSNPPYI Sbjct: 219 SSSVTGIDINEKALKLANENKILNKI-ENVNFIESNLFEKLDKDFKYDLIVSNPPYISKE 277 Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238 + L EV++++P+ +L DGL YR I+ +L G + EIGYNQ DV +I Sbjct: 278 EYEILMPEVKNYEPQNALTDLGDGLYFYREISKLAGEYLKDTGYLAYEIGYNQAKDVSKI 337 Query: 239 FESRKLFLVNAFKDYGGNDRVLLFCR 264 + +++ KDYGGNDRV++ + Sbjct: 338 LQDNNFAILSIVKDYGGNDRVIIAKK 363 Score = 39.7 bits (92), Expect = 0.37, Method: Composition-based stats. Identities = 3/42 (7%), Positives = 15/42 (35%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVR 44 ++ + V L + + + L + ++ + + + Sbjct: 22 PRLEAEKLVSYVLNLDRIALYIHYERELSEDEKTSIKQYLKK 63 >gi|15604677|ref|NP_221195.1| bifunctional N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase/tRNA (m7G46) methyltransferase [Rickettsia prowazekii str. Madrid E] gi|6225501|sp|Q9ZCB3|HEMK_RICPR RecName: Full=Bifunctional methyltransferase; Includes: RecName: Full=HemK protein homolog; AltName: Full=M.RprHemKP; Includes: RecName: Full=tRNA (guanine-N(7)-)-methyltransferase; AltName: Full=tRNA(m7G46)-methyltransferase gi|3861372|emb|CAA15271.1| POSSIBLE PROTOPORPHYRINOGEN OXIDASE (hemK) [Rickettsia prowazekii] gi|292572508|gb|ADE30423.1| Methylase of polypeptide chain release factors [Rickettsia prowazekii Rp22] Length = 518 Score = 275 bits (704), Expect = 5e-72, Method: Composition-based stats. Identities = 78/271 (28%), Positives = 133/271 (49%), Gaps = 15/271 (5%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 ++ L VT +++ + L + + + R L HE I I+G ++FY+ Sbjct: 26 LEARILLQHVTNKPIEHLLIKLNEQLSEAEIEAFEKLLERRLAHEPIAYIIGVKEFYSRE 85 Query: 65 LTLSSDTFEPRPETELLVDSALA--------------FSLPRIEKRDVVRILDLGTGTGA 110 ++ PR +TE+LVD + SL + IL+LGTG+G Sbjct: 86 FIVNKHVLIPRIDTEVLVDVVIGLVVSRNNLHMFSKLKSLDSVLTTQSYNILELGTGSGC 145 Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIV 169 + ++LL E P + DIS A+++AKSN++ V++R + S+WF ++ FD IV Sbjct: 146 IAISLLCELPNTNIIATDISVDAIKVAKSNSIKYNVTDRIQIIHSNWFEKLDKQKFDFIV 205 Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY 229 SNPPYI + +E +++P I+L DGL Y IA + L +G +EIG+ Sbjct: 206 SNPPYISHTEKLKMAIETINYEPSIALFAEEDGLEAYSIIAKNAKQFLKPNGKIILEIGF 265 Query: 230 NQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 +Q V +IF + + ++D ++RV+ Sbjct: 266 SQAAKVSKIFLNYGYNIDYIYRDLQSHNRVI 296 >gi|300853433|ref|YP_003778417.1| putative modification methylase [Clostridium ljungdahlii DSM 13528] gi|300433548|gb|ADK13315.1| predicted modification methylase [Clostridium ljungdahlii DSM 13528] Length = 287 Score = 275 bits (703), Expect = 5e-72, Method: Composition-based stats. Identities = 71/260 (27%), Positives = 117/260 (45%), Gaps = 7/260 (2%) Query: 4 LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63 D+ L +V ++++ D + +++ + + ILG +F + Sbjct: 28 ALDAQLLLGKVLNKDRLFMLINGDYKVPEKETEEYYKYLKLREDKMPVKYILGHCEFMGI 87 Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 + PRP+TE LV+ AL +I+ + I D+ GTG + +++ K Sbjct: 88 DFIVKPGVLIPRPDTETLVEQALI----QIKHNNFHNICDVCCGTGIIGISIAKLIEGMN 143 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS---SVEGLFDVIVSNPPYIESVIV 180 DIS A E+ N + E+ ++S+ E F +IVSNPPYI+ + Sbjct: 144 VKCCDISSTACEVTAENIRRFSLEEKVQVVKSNLMEYYIQNEVKFHMIVSNPPYIKESSI 203 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 L +V++++PR +L GG DGL YR I R L +G+ EIGY+Q+ V I Sbjct: 204 PTLMEDVKNYEPREALSGGKDGLEFYRKITKESLRVLESNGIIMFEIGYDQRESVSDILA 263 Query: 241 SRKLFLVNAFKDYGGNDRVL 260 + KD G DRV+ Sbjct: 264 QNGFKNIMCIKDLAGKDRVI 283 >gi|194364468|ref|YP_002027078.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Stenotrophomonas maltophilia R551-3] gi|194347272|gb|ACF50395.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Stenotrophomonas maltophilia R551-3] Length = 285 Score = 275 bits (703), Expect = 5e-72, Method: Composition-based stats. Identities = 83/266 (31%), Positives = 129/266 (48%), Gaps = 7/266 (2%) Query: 1 MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60 ++A ++ L V + LD + + R + E + + G R F Sbjct: 23 VEARHEAELLLLHVLDCPRSWLFAHATDPLDANDQAAFEALLARRVAGEPVAYLTGRRGF 82 Query: 61 YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120 + + L + T PRPETELLV+ AL R+ + +++ DLGTG+GA+ LAL E P Sbjct: 83 WTLDLEVDPATLIPRPETELLVELALE----RLPQDRALQLADLGTGSGAIALALASERP 138 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGV-SERFDTLQSDWFSSVEG-LFDVIVSNPPYIESV 178 + + D S AL +A NA + + + RF DW++ ++G FD+I SNPPYI S Sbjct: 139 QAQVLATDASPGALTVAARNAARHELGNVRFAEGGHDWYAPLQGARFDLIASNPPYIASD 198 Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238 ++R F+P +L G+DGL R I DG HL G +E G++Q + + Sbjct: 199 DPHLEQGDLR-FEPATALASGVDGLDDIRRIVDGGQAHLLPGGWLLIEHGWDQGAAIRAL 257 Query: 239 FESRKLFLVNAFKDYGGNDRVLLFCR 264 F++ V +D DR+ L R Sbjct: 258 FDAAGFAEVQTVQDLEQRDRITLGRR 283 >gi|163843894|ref|YP_001628298.1| HemK family methyltransferase [Brucella suis ATCC 23445] gi|189024939|ref|YP_001935707.1| methyltransferase [Brucella abortus S19] gi|225628072|ref|ZP_03786107.1| methyltransferase, HemK family protein [Brucella ceti str. Cudo] gi|225853307|ref|YP_002733540.1| methyltransferase, HemK family protein [Brucella melitensis ATCC 23457] gi|237816234|ref|ZP_04595227.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Brucella abortus str. 2308 A] gi|254690016|ref|ZP_05153270.1| methyltransferase, HemK family protein [Brucella abortus bv. 6 str. 870] gi|254694506|ref|ZP_05156334.1| methyltransferase, HemK family protein [Brucella abortus bv. 3 str. Tulya] gi|254696131|ref|ZP_05157959.1| methyltransferase, HemK family protein [Brucella abortus bv. 2 str. 86/8/59] gi|254700515|ref|ZP_05162343.1| methyltransferase, HemK family protein [Brucella suis bv. 5 str. 513] gi|254707599|ref|ZP_05169427.1| methyltransferase, HemK family protein [Brucella pinnipedialis M163/99/10] gi|254708864|ref|ZP_05170675.1| methyltransferase, HemK family protein [Brucella pinnipedialis B2/94] gi|254713713|ref|ZP_05175524.1| methyltransferase, HemK family protein [Brucella ceti M644/93/1] gi|254715937|ref|ZP_05177748.1| methyltransferase, HemK family protein [Brucella ceti M13/05/1] gi|254717938|ref|ZP_05179749.1| methyltransferase, HemK family protein [Brucella sp. 83/13] gi|254731049|ref|ZP_05189627.1| methyltransferase, HemK family protein [Brucella abortus bv. 4 str. 292] gi|256030390|ref|ZP_05444004.1| methyltransferase, HemK family protein [Brucella pinnipedialis M292/94/1] gi|256045466|ref|ZP_05448353.1| methyltransferase, HemK family protein [Brucella melitensis bv. 1 str. Rev.1] gi|256158373|ref|ZP_05456271.1| methyltransferase, HemK family protein [Brucella ceti M490/95/1] gi|256253792|ref|ZP_05459328.1| methyltransferase, HemK family protein [Brucella ceti B1/94] gi|256258271|ref|ZP_05463807.1| methyltransferase, HemK family protein [Brucella abortus bv. 9 str. C68] gi|256263205|ref|ZP_05465737.1| methyltransferase [Brucella melitensis bv. 2 str. 63/9] gi|260169299|ref|ZP_05756110.1| methyltransferase, HemK family protein [Brucella sp. F5/99] gi|260545991|ref|ZP_05821731.1| methyltransferase [Brucella abortus NCTC 8038] gi|260755552|ref|ZP_05867900.1| modification methylase [Brucella abortus bv. 6 str. 870] gi|260758775|ref|ZP_05871123.1| modification methylase [Brucella abortus bv. 4 str. 292] gi|260760499|ref|ZP_05872842.1| modification methylase [Brucella abortus bv. 2 str. 86/8/59] gi|260884576|ref|ZP_05896190.1| modification methylase [Brucella abortus bv. 9 str. C68] gi|261214823|ref|ZP_05929104.1| modification methylase [Brucella abortus bv. 3 str. Tulya] gi|261217700|ref|ZP_05931981.1| modification methylase [Brucella ceti M13/05/1] gi|261315086|ref|ZP_05954283.1| modification methylase [Brucella pinnipedialis M163/99/10] gi|261316357|ref|ZP_05955554.1| modification methylase [Brucella pinnipedialis B2/94] gi|261321453|ref|ZP_05960650.1| modification methylase [Brucella ceti M644/93/1] gi|261751019|ref|ZP_05994728.1| modification methylase [Brucella suis bv. 5 str. 513] gi|261758812|ref|ZP_06002521.1| methyltransferase [Brucella sp. F5/99] gi|265982881|ref|ZP_06095616.1| modification methylase [Brucella sp. 83/13] gi|265987429|ref|ZP_06099986.1| modification methylase [Brucella pinnipedialis M292/94/1] gi|265991892|ref|ZP_06104449.1| modification methylase [Brucella melitensis bv. 1 str. Rev.1] gi|265996885|ref|ZP_06109442.1| modification methylase [Brucella ceti M490/95/1] gi|294851111|ref|ZP_06791784.1| protein-(glutamine-N5) methyltransferase [Brucella sp. NVSL 07-0026] gi|297247115|ref|ZP_06930833.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Brucella abortus bv. 5 str. B3196] gi|306838262|ref|ZP_07471112.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Brucella sp. NF 2653] gi|163674617|gb|ABY38728.1| methyltransferase, HemK family [Brucella suis ATCC 23445] gi|189020511|gb|ACD73233.1| Methyltransferase [Brucella abortus S19] gi|225616897|gb|EEH13944.1| methyltransferase, HemK family protein [Brucella ceti str. Cudo] gi|225641672|gb|ACO01586.1| methyltransferase, HemK family protein [Brucella melitensis ATCC 23457] gi|237788301|gb|EEP62516.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Brucella abortus str. 2308 A] gi|260096098|gb|EEW79974.1| methyltransferase [Brucella abortus NCTC 8038] gi|260669093|gb|EEX56033.1| modification methylase [Brucella abortus bv. 4 str. 292] gi|260670931|gb|EEX57752.1| modification methylase [Brucella abortus bv. 2 str. 86/8/59] gi|260675660|gb|EEX62481.1| modification methylase [Brucella abortus bv. 6 str. 870] gi|260874104|gb|EEX81173.1| modification methylase [Brucella abortus bv. 9 str. C68] gi|260916430|gb|EEX83291.1| modification methylase [Brucella abortus bv. 3 str. Tulya] gi|260922789|gb|EEX89357.1| modification methylase [Brucella ceti M13/05/1] gi|261294143|gb|EEX97639.1| modification methylase [Brucella ceti M644/93/1] gi|261295580|gb|EEX99076.1| modification methylase [Brucella pinnipedialis B2/94] gi|261304112|gb|EEY07609.1| modification methylase [Brucella pinnipedialis M163/99/10] gi|261738796|gb|EEY26792.1| methyltransferase [Brucella sp. F5/99] gi|261740772|gb|EEY28698.1| modification methylase [Brucella suis bv. 5 str. 513] gi|262551353|gb|EEZ07343.1| modification methylase [Brucella ceti M490/95/1] gi|263002900|gb|EEZ15251.1| modification methylase [Brucella melitensis bv. 1 str. Rev.1] gi|263093127|gb|EEZ17262.1| methyltransferase [Brucella melitensis bv. 2 str. 63/9] gi|264659626|gb|EEZ29887.1| modification methylase [Brucella pinnipedialis M292/94/1] gi|264661473|gb|EEZ31734.1| modification methylase [Brucella sp. 83/13] gi|294819700|gb|EFG36699.1| protein-(glutamine-N5) methyltransferase [Brucella sp. NVSL 07-0026] gi|297174284|gb|EFH33631.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Brucella abortus bv. 5 str. B3196] gi|306406665|gb|EFM62894.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Brucella sp. NF 2653] gi|326409871|gb|ADZ66936.1| Methyltransferase [Brucella melitensis M28] gi|326539584|gb|ADZ87799.1| methyltransferase, HemK family protein [Brucella melitensis M5-90] Length = 295 Score = 275 bits (703), Expect = 6e-72, Method: Composition-based stats. Identities = 106/258 (41%), Positives = 150/258 (58%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 D+ + TG + ++ P+ ++ + L A+ R E +HRI+G R+FY + Sbjct: 30 LDARLLIEWATGATRLDLVSQPEKLIGSAEAEKLRAALERRAGGEPVHRIMGQREFYGLP 89 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 LS+ T EPRP+TE LV+ + I + +LD+GTGTGA+ ++LL G Sbjct: 90 FRLSAQTLEPRPDTEALVELVIPVLEQLIARHGTAEVLDMGTGTGAIIISLLHRFEHMHG 149 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184 +GVD++ AL A+ NA+ NGV ERF L+SDWFS+V G F +IVSNPPYI + L Sbjct: 150 IGVDVAEGALATARINAIDNGVGERFAGLKSDWFSNVSGKFHLIVSNPPYIPHAEIAGLS 209 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 EVR+ DP +LDGG DGL Y+ +A GV +L KDG+ +VEIG Q DV +F+S Sbjct: 210 REVREHDPLAALDGGPDGLDFYKALAQGVGAYLYKDGMVAVEIGAGQFQDVEALFKSTGF 269 Query: 245 FLVNAFKDYGGNDRVLLF 262 L D GG+ R +LF Sbjct: 270 SLAGEANDLGGHRRAMLF 287 >gi|313891849|ref|ZP_07825454.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Dialister microaerophilus UPII 345-E] gi|313119843|gb|EFR43030.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Dialister microaerophilus UPII 345-E] Length = 288 Score = 275 bits (703), Expect = 6e-72, Method: Composition-based stats. Identities = 82/265 (30%), Positives = 134/265 (50%), Gaps = 8/265 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 D+ L V + + D + +++ + I + S+ ++G +DF Sbjct: 28 PRLDAELLLSYVLKKTRIYLYTDFEQIVNKDELKEFKKLIQNRINGFSVATLIGEKDFMG 87 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + ++ PRP+TE V+ + IE + + D+G G+GA+ + LK Sbjct: 88 FKFFVNDKVLIPRPDTETWVEKVIQIHKNDIE----LFVADIGCGSGAIICSFLKYCKNA 143 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIV 180 KGVG+DIS A+EI+K N + R + + D+F++++ FD I SNPPYI + + Sbjct: 144 KGVGIDISDDAIEISKKNIKNLSLENRIELRKGDFFNALKKGEKFDGIFSNPPYIPTDDI 203 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 L EV++ +P I+LDGG DGL+ YR IA+ + LN G +VE+G +Q + V +FE Sbjct: 204 KFLQKEVKN-EPLIALDGGKDGLNFYRKIAENAEKFLNSGGFLAVEVGIHQSLIVKEMFE 262 Query: 241 SRKLF-LVNAFKDYGGNDRVLLFCR 264 S F KDYG +R + R Sbjct: 263 STGYFTDFEIIKDYGNIERAVYCIR 287 >gi|226952753|ref|ZP_03823217.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Acinetobacter sp. ATCC 27244] gi|226836502|gb|EEH68885.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Acinetobacter sp. ATCC 27244] Length = 270 Score = 275 bits (703), Expect = 6e-72, Method: Composition-based stats. Identities = 85/262 (32%), Positives = 132/262 (50%), Gaps = 10/262 (3%) Query: 4 LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63 +++ L + G++S ++ + + L + Q + + R + E + + G + F+ + Sbjct: 18 RQEAAWLLEHILGVNSLELKLRLEQELTEIQEQAYLDGLARIEQGEPLAYVTGSQPFWTL 77 Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 L ++ DT PRP+TE+LV++ L SL I+DLGTGTGA+ LAL E P + Sbjct: 78 DLKVTHDTLVPRPDTEILVETVLKLSLD-----PQANIVDLGTGTGAIALALASERPQWS 132 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDC 182 DI LE+A+ NA+ +G+S + WF ++E FD+IVSNPPYI+ V Sbjct: 133 VTATDIYQPTLEVAQENALKHGLS-QVKFACGAWFEALEQQQFDLIVSNPPYIDPDDVHM 191 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 +P +L GL+ TI L +G ++E GY+Q V IFE Sbjct: 192 QK---LKSEPERALIAANHGLADIETIIAQGKDWLKAEGWIALEHGYDQGQVVREIFEQH 248 Query: 243 KLFLVNAFKDYGGNDRVLLFCR 264 + KDYGGNDRV L + Sbjct: 249 GFNQIQTIKDYGGNDRVSLAQK 270 >gi|110635327|ref|YP_675535.1| HemK family modification methylase [Mesorhizobium sp. BNC1] gi|110286311|gb|ABG64370.1| [protein release factor]-glutamine N5-methyltransferase [Chelativorans sp. BNC1] Length = 288 Score = 275 bits (703), Expect = 6e-72, Method: Composition-based stats. Identities = 115/262 (43%), Positives = 155/262 (59%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 A ++ + + + Q I P+ ++ + A+ R + E +HRILG RDFY Sbjct: 24 DAALEARLIVEHFSETTQTQAITHPECAVEAAVAEKVARAVERRIAGEPVHRILGHRDFY 83 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 ++L LS +T EPRP+TE LVD L + + RILDLGTGTGA+ LALL P Sbjct: 84 GLKLALSPETLEPRPDTETLVDLVLPEARRIANVKKHCRILDLGTGTGAIALALLSVVPE 143 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181 + VG DIS ALE A+ NA + V+ERF L+SDWF +V+G FD+IVSNPPYI + ++ Sbjct: 144 AEAVGTDISEGALETARHNADMSFVAERFTPLRSDWFRNVDGRFDLIVSNPPYIATAEME 203 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 L EVR+ DP+ +LDGG DGL YR IA G HL ++GL +VE G QK V IF + Sbjct: 204 TLPREVREHDPKAALDGGPDGLMPYRAIASGARDHLTREGLIAVETGAEQKAAVAAIFAA 263 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 + +D GG DR +LF Sbjct: 264 EGYAVSRTARDLGGRDRAMLFA 285 >gi|294782569|ref|ZP_06747895.1| methyltransferase [Fusobacterium sp. 1_1_41FAA] gi|294481210|gb|EFG28985.1| methyltransferase [Fusobacterium sp. 1_1_41FAA] Length = 382 Score = 275 bits (703), Expect = 6e-72, Method: Composition-based stats. Identities = 83/265 (31%), Positives = 137/265 (51%), Gaps = 8/265 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDFY 61 AL D+ +S + + + + + + ++ K + + ILG +FY Sbjct: 104 ALVDTEYIFSEALKVSRNTLKYSMSREIKEEDKNKIREMLMLRAKNRKPLQYILGEWEFY 163 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 + + + PRP+TE+LV+ + + + + ILD+G+G+GA+ +A+ E Sbjct: 164 GLPFKVRENVLIPRPDTEILVEQCI----QLMREIEEPNILDIGSGSGAISIAIANELKS 219 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVI 179 GVDI+ A+E+A N V N V E + ++SD F ++ +D+IVSNPPYI Sbjct: 220 SSVTGVDINEDAIELANENKVLNKV-ENVNFMKSDLFEKLDEDFKYDLIVSNPPYITKEE 278 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 + L EV++F+P+ +L DGL YR I+ +L G + EIGY Q DV +I Sbjct: 279 YESLMPEVKNFEPKNALTDLGDGLHFYREISKKAGSYLKDTGYLAFEIGYKQAKDVSKIL 338 Query: 240 ESRKLFLVNAFKDYGGNDRVLLFCR 264 E +++ KDYGGNDRV+L + Sbjct: 339 EDNNFAILSVVKDYGGNDRVVLAKK 363 Score = 39.7 bits (92), Expect = 0.41, Method: Composition-based stats. Identities = 4/47 (8%), Positives = 18/47 (38%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHE 49 +S + V L + + + L + ++ + + + ++ + Sbjct: 22 PRLESEKLVSYVLNLDRIALYIHHERELTEEEKTSIKQFLKQMVEEK 68 >gi|91792281|ref|YP_561932.1| HemK family modification methylase [Shewanella denitrificans OS217] gi|91714283|gb|ABE54209.1| modification methylase, HemK family [Shewanella denitrificans OS217] Length = 284 Score = 274 bits (702), Expect = 7e-72, Method: Composition-based stats. Identities = 83/261 (31%), Positives = 133/261 (50%), Gaps = 8/261 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A D+ L + P+ L +Q N +++ + + I+G R+F++ Sbjct: 27 AHVDAEVLLLHCLNKPKSFIYTWPEKALSVQQFRAFNNMVLKRQQGVPVAHIIGEREFWS 86 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + ++ T PRP+TE+LV++AL +L ++LDLGTGTGA+ L+L E P + Sbjct: 87 LPFIVNESTLIPRPDTEILVETALNLTLS-----PHAKVLDLGTGTGAIALSLASERPDW 141 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181 K +D +A+E+AK+N + + + LQSDWFS+V+ FD+IVSNPPYI++ Sbjct: 142 KVTAIDKVDEAVELAKANRQNLNLP-QVEILQSDWFSAVKDRDFDLIVSNPPYIDAEDEH 200 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P+ +L G G + IA+ HL G +E G+ Q + V Sbjct: 201 LNLGDVR-FEPQSALTAGEHGYADLFHIAEHAREHLVHGGYLLLEHGFEQAIKVREKLIE 259 Query: 242 RKLFLVNAFKDYGGNDRVLLF 262 V +D+G NDR L Sbjct: 260 LGYQQVATVRDFGSNDRCTLG 280 >gi|154707092|ref|YP_001425369.1| peptide release factor-glutamine N5-methyltransferase [Coxiella burnetii Dugway 5J108-111] gi|154356378|gb|ABS77840.1| peptide release factor-glutamine N5-methyltransferase [Coxiella burnetii Dugway 5J108-111] Length = 277 Score = 274 bits (702), Expect = 7e-72, Method: Composition-based stats. Identities = 78/263 (29%), Positives = 124/263 (47%), Gaps = 9/263 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 D+ L V S + P+ L+ Q+ L+ + R LK E I ILG ++F++ Sbjct: 22 PRLDAELLLECVLKKSRADLFAYPEIQLNSSQQKTLSAYVKRRLKGEPIAYILGQKEFWS 81 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L ++ D PRPETE+LV L + K + +RI DLGTG+GAV LA+ E P + Sbjct: 82 LNLKVTPDVLIPRPETEMLVGWILK----NLPKDEKLRIADLGTGSGAVALAIAVERPHW 137 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181 D S AL+IA+ NA + + + +W ++ + IV NPPYI Sbjct: 138 TIDATDNSQAALKIAEINAKQHEIK-NCNFYHGEWCQALPRRDYHAIVGNPPYIPDKDQH 196 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +PR +L G DGLS + I +L G +E GY+Q ++ + ++ Sbjct: 197 LQQ---LKHEPREALAAGSDGLSAIKIIIHEAKSYLVNGGWLLLEHGYDQAEKIMTLMQA 253 Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264 + +D G R+++ R Sbjct: 254 DGYREITDRRDLAGLSRMMVARR 276 >gi|319779046|ref|YP_004129959.1| Methylase of polypeptide chain release factor [Taylorella equigenitalis MCE9] gi|317109070|gb|ADU91816.1| Methylase of polypeptide chain release factor [Taylorella equigenitalis MCE9] Length = 275 Score = 274 bits (702), Expect = 8e-72, Method: Composition-based stats. Identities = 87/260 (33%), Positives = 131/260 (50%), Gaps = 9/260 (3%) Query: 4 LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63 +S L V G+ + V D ++ + Q+ + R L+ E I ++G R+F + Sbjct: 17 RLESQIILAHVLGVDRVWLFVHDDVLICEEQKLEFDTLVQRRLEGEPIAYLVGSREFMGL 76 Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 L + + PRP+TELLV+ AL F RILDLGTG+GA+ +++ P + Sbjct: 77 ELNVDNSVLIPRPDTELLVECALDFLK---TTPTGARILDLGTGSGAIAISIANFMPKCE 133 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVIV 180 VDIS +AL++A NA +GV + WF ++ G FD+IVSNPPYI S + Sbjct: 134 VYAVDISKEALKVAYLNAKNHGV--HIKFFEGSWFDALPYDVGTFDLIVSNPPYIASDDI 191 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 +VR ++P +L GG DGLS Y I V ++ E G+ Q ++ RI E Sbjct: 192 HLQLGDVR-YEPITALVGGNDGLSEYIKIMKQVHDFIHSGSAIMFEHGWTQGAELRRILE 250 Query: 241 SRKLFLVNAFKDYGGNDRVL 260 +N KD G++RV Sbjct: 251 QGHCHKINTHKDLAGHERVT 270 >gi|313202187|ref|YP_004040845.1| HemK family modification methylase [Methylovorus sp. MP688] gi|312441503|gb|ADQ85609.1| modification methylase, HemK family [Methylovorus sp. MP688] Length = 297 Score = 274 bits (702), Expect = 8e-72, Method: Composition-based stats. Identities = 85/275 (30%), Positives = 126/275 (45%), Gaps = 18/275 (6%) Query: 2 QALRDSHSFLCRVTG-LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60 +A ++ + + G + +I L + + R L E + ILG R+F Sbjct: 25 EARNEARMLMSQALGNVEHAWLIAHESDALPSAVASTFHDLLHRRLAGEPVAYILGNREF 84 Query: 61 YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120 + +RL +S T PRP+TE LV++ALA I + ++LDLGTGTGA+ LA+ P Sbjct: 85 FGLRLAVSPATLIPRPDTETLVEAALA----HIPSEETRQVLDLGTGTGAIALAIAAHRP 140 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVS-----------ERFDTLQSDWFSSVEG-LFDVI 168 + + VD S AL++A+ NA G++ + WF+ + G FDVI Sbjct: 141 QSRVIAVDASAAALQVARHNAEALGLATPEAGDQDTTKGNVEFRLGSWFTPLAGLKFDVI 200 Query: 169 VSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228 VSNPPYI ++R +P +L G+DGL R I HL G +E G Sbjct: 201 VSNPPYIRKDDPHLQQGDLR-HEPLSALASGVDGLDDIRIIVQHAPAHLQPSGWLLLEHG 259 Query: 229 YNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFC 263 Y+Q V + + V D G RV L Sbjct: 260 YDQADAVATLMRNTGFSDVQHAHDLAGIARVTLGQ 294 >gi|306842977|ref|ZP_07475611.1| protein-glutamine-N5 methyltransferase, release factor-specific [Brucella sp. BO2] gi|306286905|gb|EFM58430.1| protein-glutamine-N5 methyltransferase, release factor-specific [Brucella sp. BO2] Length = 295 Score = 274 bits (702), Expect = 8e-72, Method: Composition-based stats. Identities = 106/258 (41%), Positives = 151/258 (58%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 D+ + TG + ++ P+ ++ + L A+ R E +HRI+G R+FY + Sbjct: 30 LDARLLIEWATGATRLDLVSQPEKLIGSAEAEKLRAALERRAGGEPVHRIMGQREFYGLP 89 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 LS+ T EPRP+TE LV+ + I + + +LD+GTGTGA+ ++LL G Sbjct: 90 FRLSAQTLEPRPDTEALVELVIPVLEQLIARHGMAEVLDMGTGTGAIIISLLHRFEHMHG 149 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184 +GVD++ AL A+ NA+ NGV ERF L+SDWFS+V G F +IVSNPPYI + L Sbjct: 150 IGVDVAEGALATARINAIDNGVGERFAGLKSDWFSNVSGKFHLIVSNPPYIPHAEIAGLS 209 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 EVR+ DP +LDGG DGL Y+ +A GV +L KDG+ +VEIG Q DV +F+S Sbjct: 210 REVREHDPLAALDGGPDGLDFYKALAQGVGAYLYKDGMVAVEIGAGQFQDVEALFKSTGF 269 Query: 245 FLVNAFKDYGGNDRVLLF 262 L D GG+ R +LF Sbjct: 270 SLAGEANDLGGHRRAMLF 287 >gi|253997607|ref|YP_003049671.1| HemK family modification methylase [Methylotenera mobilis JLW8] gi|253984286|gb|ACT49144.1| modification methylase, HemK family [Methylotenera mobilis JLW8] Length = 292 Score = 274 bits (702), Expect = 8e-72, Method: Composition-based stats. Identities = 94/262 (35%), Positives = 129/262 (49%), Gaps = 7/262 (2%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 A ++ L + ++ VL + R L E + ILG+R+FY Sbjct: 26 DAKFEAQLLLQSALKVKRSWLLAHEQDVLPASVSADFETLLTRRLAGEPVAYILGYREFY 85 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 + L +S DT PRP+TE LV++ALA +I ILDLGTGTGAV LA+ + P Sbjct: 86 GLNLKVSPDTLIPRPDTETLVEAALA----KIPTDTDYTILDLGTGTGAVALAIAQHRPH 141 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIV 180 + VD S AL IA+ NA G++ + S WFS+VE F++I+SNPPYIE Sbjct: 142 TQVTAVDASQGALHIAEHNAQQLGLT-QVRFSLSHWFSAVESERFNLIISNPPYIEQHDP 200 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 ++R F+P +L G+DGL R I HL G +E GYNQ V + Sbjct: 201 HLGQGDLR-FEPISALASGVDGLDDIREIIAHSLIHLQPQGWLMLEHGYNQAHLVADLMA 259 Query: 241 SRKLFLVNAFKDYGGNDRVLLF 262 L + KD G NDRV + Sbjct: 260 ESGLVDIETIKDLGANDRVTIG 281 >gi|326796199|ref|YP_004314019.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Marinomonas mediterranea MMB-1] gi|326546963|gb|ADZ92183.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Marinomonas mediterranea MMB-1] Length = 278 Score = 274 bits (702), Expect = 8e-72, Method: Composition-based stats. Identities = 90/264 (34%), Positives = 126/264 (47%), Gaps = 9/264 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A D+ L +S + + ++ + R L E I ++G +DF+ Sbjct: 21 AKLDAELLLAHCMQVSRTYLFTWSEKDIEPVCLTRFYRLLERRLVGEPIAYLIGKQDFWT 80 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +S T PRP+TE LV+ AL I + ILDLGTGTGA+ LAL E Sbjct: 81 LELDVSPTTLIPRPDTERLVEVALDL----IAGVEKPNILDLGTGTGAIALALAYERKDA 136 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIV 180 G D +A+E+A NA N +S F + SDWFS V + F +IVSNPPYI+ Sbjct: 137 LVSGADCVKQAVELATRNAEKNALSVNF--IHSDWFSEVPSDNQFHLIVSNPPYIDPNDK 194 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 +VR F+P +L +G+ I +L+ G + E GY+Q V F Sbjct: 195 HLSQGDVR-FEPDSALTADQEGMGDINRILSEAPHYLHDTGWLAFEHGYDQGEKVRLAFA 253 Query: 241 SRKLFLVNAFKDYGGNDRVLLFCR 264 SR V F DYGGNDRV + + Sbjct: 254 SRGFLSVETFADYGGNDRVTIGQK 277 >gi|315500227|ref|YP_004089030.1| protein-(glutamine-n5) methyltransferase, release factor-specific [Asticcacaulis excentricus CB 48] gi|315418239|gb|ADU14879.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Asticcacaulis excentricus CB 48] Length = 289 Score = 274 bits (702), Expect = 8e-72, Method: Composition-based stats. Identities = 90/260 (34%), Positives = 136/260 (52%), Gaps = 5/260 (1%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L TG + ++ DP +L Q+ L + + R K + RILG + F+ + L Sbjct: 30 DARLLLEAATGYTRTDILTDPYKLLTAEQKATLDDYLTRREKRVPVARILGRKGFWKLLL 89 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 L+ PRPETE +VD L + E+ + DLG G+GA+ L++L E P KG+ Sbjct: 90 DLTPAVLVPRPETECIVDMILKTT----EEGQAFTLADLGVGSGAILLSVLSERPAAKGL 145 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLG 184 G D+S +AL +A+ NA G+ R L++ W + + + FD + SNPPYI S ++ L Sbjct: 146 GTDVSEEALAVARDNAANLGLDGRAAFLRTSWGAGLADASFDFVASNPPYIRSEVIPTLD 205 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 EVRD DP ++LDGG GL Y + R L G +EIGY+Q V + + Sbjct: 206 PEVRDHDPHLALDGGESGLDAYIEMIPEAFRILKAGGTAWMEIGYDQSAAVEDLMKKAGF 265 Query: 245 FLVNAFKDYGGNDRVLLFCR 264 F V FKD R+++ + Sbjct: 266 FNVVTFKDLSDLPRIVIGQK 285 >gi|240015595|ref|ZP_04722135.1| HemK [Neisseria gonorrhoeae FA6140] gi|240114685|ref|ZP_04728747.1| HemK [Neisseria gonorrhoeae PID18] gi|268600328|ref|ZP_06134495.1| hemK protein [Neisseria gonorrhoeae PID18] gi|268584459|gb|EEZ49135.1| hemK protein [Neisseria gonorrhoeae PID18] Length = 301 Score = 274 bits (702), Expect = 8e-72, Method: Composition-based stats. Identities = 87/260 (33%), Positives = 122/260 (46%), Gaps = 12/260 (4%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 ++ L V+ + Q++ + D R R L E + ILG R+FY R Sbjct: 44 EARMLLQYVSEYTRVQLLTRGGEEMPDEIRQRADRLAQRRLNGEPVAYILGVREFYGRRF 103 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 T++ + PRPETE LV++ LA + R+ DLGTG+GAV + + E P Sbjct: 104 TVNPNVLIPRPETEHLVEAVLARL------PENGRVWDLGTGSGAVAVTVALERPDAFVR 157 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS---SVEGLFDVIVSNPPYIESVIVDC 182 DIS ALE A+ NA G R + WF E +D+IVSNPPYIE+ Sbjct: 158 ASDISTPALETARKNAADLGA--RVEFAHGSWFDTDMPSERQWDIIVSNPPYIENGDKHL 215 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 ++R F+P+I+L DGLS RT+A G L + G +E G++Q V + Sbjct: 216 SQGDLR-FEPQIALTDFSDGLSCIRTLAQGAPDRLAEGGFLLLEHGFDQGAAVRGVLAEN 274 Query: 243 KLFLVNAFKDYGGNDRVLLF 262 V D G DRV L Sbjct: 275 GFSGVEILPDLAGLDRVTLG 294 >gi|212213423|ref|YP_002304359.1| peptide release factor-glutamine N5-methyltransferase [Coxiella burnetii CbuG_Q212] gi|212011833|gb|ACJ19214.1| peptide release factor-glutamine N5-methyltransferase [Coxiella burnetii CbuG_Q212] Length = 277 Score = 274 bits (702), Expect = 8e-72, Method: Composition-based stats. Identities = 77/263 (29%), Positives = 125/263 (47%), Gaps = 9/263 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 D+ L V S + P+ L+ Q+ L+ + R +K E I ILG ++F++ Sbjct: 22 PRLDAELLLECVLKKSRADLFAYPEIQLNSSQQKTLSAYVKRRVKGEPIAYILGQKEFWS 81 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L ++ D PRPETE+LV+ L + K + +RI DLGTG+GAV LA+ E P + Sbjct: 82 LNLKVTPDVLIPRPETEMLVEWILK----NLPKDEKLRIADLGTGSGAVALAIAVERPHW 137 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181 D S AL+IA+ NA + + + +W ++ + IV NPPYI Sbjct: 138 TIDATDNSQAALKIAEINAKQHEIK-NCNFYHGEWCQALPRRDYHAIVGNPPYIPDKDQH 196 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +PR +L G DGLS + I +L G +E GY+Q ++ + ++ Sbjct: 197 LQQ---LKHEPREALAAGSDGLSAIKIIIHEAKSYLVNGGRLLLEHGYDQAEKIMTLMQA 253 Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264 + +D G R+++ R Sbjct: 254 DGYREITDRRDLAGLSRMMVARR 276 >gi|258645289|ref|ZP_05732758.1| protein-(glutamine-N5) methyltransferase [Dialister invisus DSM 15470] gi|260402639|gb|EEW96186.1| protein-(glutamine-N5) methyltransferase [Dialister invisus DSM 15470] Length = 288 Score = 274 bits (702), Expect = 8e-72, Method: Composition-based stats. Identities = 86/265 (32%), Positives = 137/265 (51%), Gaps = 9/265 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A DS L V G S + + + +L ++ I + ++ S I+G ++F Sbjct: 28 ARLDSEILLSHVLGKSRIYLYTEFERILAAKELALFKKYIQKRIEGFSAAAIIGKKEFMG 87 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L ++ PRP+TE ++ + + +++ DLGTG+GA+ + L Sbjct: 88 LTLKVNEQVLIPRPDTETWLEKVIQY----YRNETGLKVADLGTGSGAILVGFLYYCRDA 143 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIV 180 GVGVDIS +AL+IA+ N +++R + Q D+ + E +FD I SNPPYI + + Sbjct: 144 VGVGVDISTEALKIAEENGQNLKLTDRVEWRQGDYLKAFDEEDIFDGIFSNPPYIPTKDI 203 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 L EV+ +PR++LDGG DGL Y +A G + HL G +VE G Q D++ +F Sbjct: 204 GGLPGEVK-HEPRLALDGGTDGLYFYHLLAKGAAEHLKPGGFLAVEFGIGQATDILEMFR 262 Query: 241 -SRKLFLVNAFKDYGGNDRVLLFCR 264 S + KDYGG +R L+CR Sbjct: 263 KSAQYEDFEVIKDYGGIERA-LYCR 286 >gi|253583343|ref|ZP_04860541.1| polypeptide chain release factor methyltransferase HemK [Fusobacterium varium ATCC 27725] gi|251833915|gb|EES62478.1| polypeptide chain release factor methyltransferase HemK [Fusobacterium varium ATCC 27725] Length = 369 Score = 274 bits (702), Expect = 8e-72, Method: Composition-based stats. Identities = 81/264 (30%), Positives = 134/264 (50%), Gaps = 7/264 (2%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTN-AIVRSLKHESIHRILGWRDFY 61 D+ + G++ + ++ + ++++ + + I+R + + +LG +FY Sbjct: 107 PKLDAEYIFAYILGVNRLTLTLNFNKKIEEKDKEKIREYLILRGKNRKPLQYLLGEWEFY 166 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 + PR +TE+LV+ F L +E ++LD+GTG+GA+ + L KE P Sbjct: 167 GYPFKVDERVLIPRSDTEILVEQ-CKFILNELEN---PKVLDIGTGSGAIAVTLGKECPN 222 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIV 180 +G DIS ALE+A++N N +E ++SD FSS + FD I+SNPPYI Sbjct: 223 SVIIGADISEGALEVAEANREMNK-AENVKFMKSDVFSSFKDMKFDFIISNPPYIPLEEY 281 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 + L EV ++P +L +G Y I+ S +LNK G + E+GYNQ V + E Sbjct: 282 NKLMPEVLKYEPSSALTDNGNGYYFYSKISKEASDYLNKGGFLAFEVGYNQAETVKELME 341 Query: 241 SRKLFLVNAFKDYGGNDRVLLFCR 264 + KDYGG DRV++ + Sbjct: 342 ENGFDIFAIVKDYGGIDRVVIGKK 365 >gi|256059848|ref|ZP_05450035.1| methyltransferase, HemK family protein [Brucella neotomae 5K33] gi|261323818|ref|ZP_05963015.1| modification methylase [Brucella neotomae 5K33] gi|261299798|gb|EEY03295.1| modification methylase [Brucella neotomae 5K33] Length = 295 Score = 274 bits (702), Expect = 9e-72, Method: Composition-based stats. Identities = 106/258 (41%), Positives = 150/258 (58%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 D+ + TG + ++ P+ ++ + L A+ R E +HRI+G R+FY + Sbjct: 30 LDARLLIEWATGATRLDLVSQPEKLIGSAEAEKLRAALERRAGGEPVHRIMGQREFYGLP 89 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 LS+ T EPRP+TE LV+ + I + +LD+GTGTGA+ ++LL G Sbjct: 90 FRLSAQTLEPRPDTEALVELVIPVLEQLIARHGTAEVLDMGTGTGAIIISLLHRFEHMHG 149 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184 +GVD++ AL A+ NA+ NGV ERF L+SDWFS+V G F +IVSNPPYI + L Sbjct: 150 IGVDVAEGALATARINAIDNGVGERFAGLKSDWFSNVSGKFHLIVSNPPYIPHAEIAGLS 209 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 EVR+ DP +LDGG DGL Y+ +A GV +L KDG+ +VEIG Q DV +F+S Sbjct: 210 REVREHDPLAALDGGPDGLDFYKALAQGVGAYLYKDGMVAVEIGAGQFQDVEALFKSTGF 269 Query: 245 FLVNAFKDYGGNDRVLLF 262 L D GG+ R +LF Sbjct: 270 SLACEANDLGGHRRAMLF 287 >gi|194099711|ref|YP_002002846.1| HemK [Neisseria gonorrhoeae NCCP11945] gi|254492740|ref|ZP_05105911.1| hemK protein [Neisseria gonorrhoeae 1291] gi|268597897|ref|ZP_06132064.1| hemK protein [Neisseria gonorrhoeae FA19] gi|268600147|ref|ZP_06134314.1| hemK protein [Neisseria gonorrhoeae MS11] gi|268602560|ref|ZP_06136727.1| hemK protein [Neisseria gonorrhoeae PID1] gi|268681109|ref|ZP_06147971.1| hemK protein [Neisseria gonorrhoeae PID332] gi|268685212|ref|ZP_06152074.1| hemK protein [Neisseria gonorrhoeae SK-92-679] gi|268685589|ref|ZP_06152451.1| hemK protein [Neisseria gonorrhoeae SK-93-1035] gi|291044872|ref|ZP_06570581.1| protein methyltransferase hemK [Neisseria gonorrhoeae DGI2] gi|293397950|ref|ZP_06642156.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Neisseria gonorrhoeae F62] gi|193935001|gb|ACF30825.1| HemK [Neisseria gonorrhoeae NCCP11945] gi|226511780|gb|EEH61125.1| hemK protein [Neisseria gonorrhoeae 1291] gi|268551685|gb|EEZ46704.1| hemK protein [Neisseria gonorrhoeae FA19] gi|268584278|gb|EEZ48954.1| hemK protein [Neisseria gonorrhoeae MS11] gi|268586691|gb|EEZ51367.1| hemK protein [Neisseria gonorrhoeae PID1] gi|268621393|gb|EEZ53793.1| hemK protein [Neisseria gonorrhoeae PID332] gi|268625496|gb|EEZ57896.1| hemK protein [Neisseria gonorrhoeae SK-92-679] gi|268625873|gb|EEZ58273.1| hemK protein [Neisseria gonorrhoeae SK-93-1035] gi|291011766|gb|EFE03762.1| protein methyltransferase hemK [Neisseria gonorrhoeae DGI2] gi|291611896|gb|EFF40965.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Neisseria gonorrhoeae F62] Length = 295 Score = 274 bits (702), Expect = 9e-72, Method: Composition-based stats. Identities = 87/260 (33%), Positives = 122/260 (46%), Gaps = 12/260 (4%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 ++ L V+ + Q++ + D R R L E + ILG R+FY R Sbjct: 38 EARMLLQYVSEYTRVQLLTRGGEEMPDEIRQRADRLAQRRLNGEPVAYILGVREFYGRRF 97 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 T++ + PRPETE LV++ LA + R+ DLGTG+GAV + + E P Sbjct: 98 TVNPNVLIPRPETEHLVEAVLARL------PENGRVWDLGTGSGAVAVTVALERPDAFVR 151 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS---SVEGLFDVIVSNPPYIESVIVDC 182 DIS ALE A+ NA G R + WF E +D+IVSNPPYIE+ Sbjct: 152 ASDISTPALETARKNAADLGA--RVEFAHGSWFDTDMPSERQWDIIVSNPPYIENGDKHL 209 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 ++R F+P+I+L DGLS RT+A G L + G +E G++Q V + Sbjct: 210 SQGDLR-FEPQIALTDFSDGLSCIRTLAQGAPDRLAEGGFLLLEHGFDQGAAVRGVLAEN 268 Query: 243 KLFLVNAFKDYGGNDRVLLF 262 V D G DRV L Sbjct: 269 GFSGVEILPDLAGLDRVTLG 288 >gi|307131077|ref|YP_003883093.1| release factors RF-1 and RF-2 N5-glutamine methyltransferase [Dickeya dadantii 3937] gi|306528606|gb|ADM98536.1| release factors RF-1 and RF-2 N5-glutamine methyltransferase [Dickeya dadantii 3937] Length = 283 Score = 274 bits (702), Expect = 9e-72, Method: Composition-based stats. Identities = 87/262 (33%), Positives = 126/262 (48%), Gaps = 8/262 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 RD+ L VTG ++ ++ L D + L + R E I ++G R+F++ Sbjct: 20 PKRDAEILLEHVTGKGRTFLLAFGETELTDGEGSALAALLARRATGEPIAYLVGHREFWS 79 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +S T PRP+TE LV+ ALA +LDLGTGTGA+ LA+ E P Sbjct: 80 LSLAVSPATLIPRPDTECLVEHALAHL-----PAGASSVLDLGTGTGAIALAIAHERPDC 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181 + VG+D A+ +A NA G++ L DWFS ++G F +IVSNPPYI+ Sbjct: 135 QVVGIDRQPDAVALASHNASQLGIA-NARFLPGDWFSPLDGQRFSLIVSNPPYIDEHDPH 193 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P +L GL+ R I L G +E G+ Q V + Sbjct: 194 LSRGDVR-FEPASALVAREAGLADLRQIIRQAGGFLLDSGWLLLEHGWQQGDAVRSLLTQ 252 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 V ++DYG N+RV L Sbjct: 253 YGFVQVKTYRDYGDNERVTLGQ 274 >gi|84686943|ref|ZP_01014827.1| Putative methylase [Maritimibacter alkaliphilus HTCC2654] gi|84665140|gb|EAQ11620.1| Putative methylase [Rhodobacterales bacterium HTCC2654] Length = 279 Score = 274 bits (702), Expect = 9e-72, Method: Composition-based stats. Identities = 97/258 (37%), Positives = 136/258 (52%), Gaps = 7/258 (2%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A RD+ L +V + ++ ++ D + + + R + E + +I+G R F+ Sbjct: 22 AARDAQLLLAQVLRIEVMRLSLERDMQVSPADMLAYEDMLDRRIAREPVSKIIGRRQFWG 81 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 T++ D +PRPETE L+ AL + RILDLGTG+G + + LL E Sbjct: 82 RDFTVTRDVLDPRPETETLIAEALTGA-------PPSRILDLGTGSGILAITLLAEWREA 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182 V D+S AL++A NA NGV R L SDWF+ V+G FD+IVSNPPYI + + Sbjct: 135 FAVATDLSDPALKVAARNATLNGVDNRLTFLASDWFARVQGRFDLIVSNPPYIAADEMPS 194 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 L EV FDP+++L G DGL YR IA G H++ G VEIG+ Q V IF + Sbjct: 195 LAPEVLGFDPQMALTPGGDGLDPYRKIAAGALAHMDPGGRLLVEIGFRQGRAVSDIFAAA 254 Query: 243 KLFLVNAFKDYGGNDRVL 260 L V D G DRV+ Sbjct: 255 GLDDVRIHPDMDGRDRVI 272 >gi|87309296|ref|ZP_01091432.1| hemK protein [Blastopirellula marina DSM 3645] gi|87287935|gb|EAQ79833.1| hemK protein [Blastopirellula marina DSM 3645] Length = 294 Score = 274 bits (701), Expect = 9e-72, Method: Composition-based stats. Identities = 79/265 (29%), Positives = 124/265 (46%), Gaps = 4/265 (1%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 D+ L + G ++ D V+ + R + + + +LG R+FY+ Sbjct: 28 PRLDAELLLAQALGCKRIELYTRFDEVVAEEPRGKFRQLVKQRAAGMPVAYLLGRREFYS 87 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 ++ D PRPETE LV +AL K + RI D+G G+G + + L K+ P Sbjct: 88 RDFRVTPDVLIPRPETEHLVIAALDRLRETA-KTETARICDVGAGSGCIAITLAKDLPKL 146 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIV 180 + +DIS AL++A+ NA +GV+E+ ++SD +++ +FD+IVSNPPYI V Sbjct: 147 QVTAIDISAAALQVAQQNAEEHGVAEQIKFVKSDLLTALPENAVFDLIVSNPPYIGLVEK 206 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 L +V ++P ++L G DGL R + HL G +E G V I Sbjct: 207 PSLPKDVLQYEPHVALFSGEDGLDAIRELVRQAPSHLKPGGWLLIEFGPVVAEAAVAIVT 266 Query: 241 SRKLFLV-NAFKDYGGNDRVLLFCR 264 + F KD RVL+ R Sbjct: 267 ASDQFEAPTVEKDLAKLPRVLIARR 291 >gi|332967821|gb|EGK06920.1| protein methyltransferase HemK [Kingella kingae ATCC 23330] Length = 269 Score = 274 bits (701), Expect = 9e-72, Method: Composition-based stats. Identities = 82/263 (31%), Positives = 113/263 (42%), Gaps = 11/263 (4%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 ++ L +TGLS Q+I L L R + E I +LG R+FY Sbjct: 14 PRNETRMLLQYITGLSRSQLITHDSETLSPEHESSLHALCQRREQGEPIAYLLGEREFYG 73 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 T+S PRPETE L+++AL R + D+GTG+G + ++ E Sbjct: 74 RSFTVSPAVLIPRPETEHLLEAALCRLPAR------GFLWDMGTGSGIIAISAKLERTDA 127 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIV 180 DIS AL IA+ NA G + Q WF FDVI SNPPYI S Sbjct: 128 NVFASDISPDALNIAQHNAQRLGAA--VAFAQGSWFDCAVSAHKFDVIASNPPYINSHDT 185 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 ++R F+P +L DGL+H R I +L G +E GY+Q + +F Sbjct: 186 HLQQGDLR-FEPAHALTDFADGLAHIRHIVARAPDYLQPQGWLLLEHGYDQGAAIRDLFA 244 Query: 241 SRKLFLVNAFKDYGGNDRVLLFC 263 V +D G +RV L Sbjct: 245 QHGYTQVETLRDLAGLERVTLGQ 267 >gi|270157831|ref|ZP_06186488.1| protein-(glutamine-N5) methyltransferase [Legionella longbeachae D-4968] gi|289163903|ref|YP_003454041.1| methyltransferase HemK [Legionella longbeachae NSW150] gi|269989856|gb|EEZ96110.1| protein-(glutamine-N5) methyltransferase [Legionella longbeachae D-4968] gi|288857076|emb|CBJ10891.1| putative methyltransferase HemK [Legionella longbeachae NSW150] Length = 268 Score = 274 bits (701), Expect = 9e-72, Method: Composition-based stats. Identities = 85/264 (32%), Positives = 135/264 (51%), Gaps = 7/264 (2%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 R++ L V + + P+++L +Q + + + K I ++G R+F+ Sbjct: 11 NPQREAEILLGHVLDKTRAYLFAHPETLLTPKQLAAFEHLMAQRAKGIPIAYLMGQREFW 70 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 ++ L ++ T PR ETELLV AL F I + IL+LGTG+GA+ LAL KE P Sbjct: 71 SLDLKVNEHTLIPRHETELLVALALEF----IPDQPDTHILELGTGSGAIALALAKERPS 126 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIV 180 ++ V DIS AL++AK NA N + E + SDWFS + + IV+NPPYI Sbjct: 127 WRIVACDISEDALKVAKENAQNNKI-ENINFFLSDWFSGIPQRQYHAIVTNPPYIAEDDP 185 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 ++R F+PR +L +GL+ + I + +L G+ +E G++QK V I Sbjct: 186 HLQQGDLR-FEPRNALVSSQEGLADLQCIIEHGYEYLLPQGMLLLEHGFDQKSKVQAILN 244 Query: 241 SRKLFLVNAFKDYGGNDRVLLFCR 264 + + ++D G+DRV R Sbjct: 245 RLRYKSIRCWQDIQGHDRVSGGWR 268 >gi|62290729|ref|YP_222522.1| hypothetical protein BruAb1_1847 [Brucella abortus bv. 1 str. 9-941] gi|261220925|ref|ZP_05935206.1| modification methylase [Brucella ceti B1/94] gi|62196861|gb|AAX75161.1| HemK [Brucella abortus bv. 1 str. 9-941] gi|260919509|gb|EEX86162.1| modification methylase [Brucella ceti B1/94] Length = 290 Score = 274 bits (701), Expect = 1e-71, Method: Composition-based stats. Identities = 106/258 (41%), Positives = 150/258 (58%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 D+ + TG + ++ P+ ++ + L A+ R E +HRI+G R+FY + Sbjct: 25 LDARLLIEWATGATRLDLVSQPEKLIGSAEAEKLRAALERRAGGEPVHRIMGQREFYGLP 84 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 LS+ T EPRP+TE LV+ + I + +LD+GTGTGA+ ++LL G Sbjct: 85 FRLSAQTLEPRPDTEALVELVIPVLEQLIARHGTAEVLDMGTGTGAIIISLLHRFEHMHG 144 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184 +GVD++ AL A+ NA+ NGV ERF L+SDWFS+V G F +IVSNPPYI + L Sbjct: 145 IGVDVAEGALATARINAIDNGVGERFAGLKSDWFSNVSGKFHLIVSNPPYIPHAEIAGLS 204 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 EVR+ DP +LDGG DGL Y+ +A GV +L KDG+ +VEIG Q DV +F+S Sbjct: 205 REVREHDPLAALDGGPDGLDFYKALAQGVGAYLYKDGMVAVEIGAGQFQDVEALFKSTGF 264 Query: 245 FLVNAFKDYGGNDRVLLF 262 L D GG+ R +LF Sbjct: 265 SLAGEANDLGGHRRAMLF 282 >gi|220933706|ref|YP_002512605.1| HemK protein, putative protoporphyrinogen oxidase [Thioalkalivibrio sp. HL-EbGR7] gi|219995016|gb|ACL71618.1| HemK protein, putative protoporphyrinogen oxidase [Thioalkalivibrio sp. HL-EbGR7] Length = 274 Score = 274 bits (701), Expect = 1e-71, Method: Composition-based stats. Identities = 78/260 (30%), Positives = 122/260 (46%), Gaps = 7/260 (2%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 ++ R++ L V G ++ L R E + + R F+ Sbjct: 15 ESRREAEILLGHVLGRDRAWLMSHDTDPLPPEPVARYRALWARRQAGEPVAYLTRRRGFW 74 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 + L + + PRPETELLV++AL I + DLGTG+GA+ LAL E P Sbjct: 75 TLDLAVGPEVLIPRPETELLVETALGL----IPTDAAWDLADLGTGSGAIALALASERPA 130 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIV 180 + V D S AL +A++NA +G++ +Q +W++ + G F ++VSNPPY+ Sbjct: 131 CRVVATDKSPGALAVAEANARDHGLA-NLRFVQGEWWAPLAGERFHLVVSNPPYVAEADP 189 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 ++R F+P +L G DGL R I HL+ G +E GY+Q V + Sbjct: 190 HLARGDLR-FEPPTALASGPDGLDDLRRIIKAAPTHLHPGGHLLLEHGYDQGEAVRALLR 248 Query: 241 SRKLFLVNAFKDYGGNDRVL 260 + V ++D GGN+RV Sbjct: 249 TAGFSEVQTWRDLGGNERVT 268 >gi|313667605|ref|YP_004047889.1| Hemk protein [Neisseria lactamica ST-640] gi|313005067|emb|CBN86499.1| putative Hemk protein [Neisseria lactamica 020-06] Length = 273 Score = 274 bits (701), Expect = 1e-71, Method: Composition-based stats. Identities = 84/263 (31%), Positives = 121/263 (46%), Gaps = 12/263 (4%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 ++ L + + Q++ + D R L E + +LGWR+FY Sbjct: 13 PKNEARMLLQYASEYTRVQLLTRGGEEMPDEVRQRADRLAQSRLNGEPVAYLLGWREFYG 72 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 R ++ + PRPETE LV++ LA + R+ DLGTG+GAV + + E P Sbjct: 73 RRFAVNPNVLIPRPETEHLVEAVLARL------PENGRVWDLGTGSGAVAVTVALERPDA 126 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS---SVEGLFDVIVSNPPYIESVI 179 DIS ALE A+ NA G + + WF EG +D+IVSNPPYIE+ Sbjct: 127 FVCASDISPPALETARKNAADLGAA--VEFAHGSWFDTDMPSEGKWDIIVSNPPYIENGD 184 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 ++R F+P+I+L DGLS RT+A G L + G +E G++Q V + Sbjct: 185 EHLSQGDLR-FEPQIALTDFSDGLSCIRTLAQGAPDRLAEGGFLLLEHGFDQGAAVRGVL 243 Query: 240 ESRKLFLVNAFKDYGGNDRVLLF 262 V D G DRV L Sbjct: 244 AENGFSGVETLPDLAGLDRVTLG 266 >gi|303228389|ref|ZP_07315222.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Veillonella atypica ACS-134-V-Col7a] gi|302516891|gb|EFL58800.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Veillonella atypica ACS-134-V-Col7a] Length = 289 Score = 274 bits (701), Expect = 1e-71, Method: Composition-based stats. Identities = 88/265 (33%), Positives = 129/265 (48%), Gaps = 9/265 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 D L V G + + + D L+ + ++ K S+ + G +DF Sbjct: 27 PRLDGEVLLSHVLGKNRIYLYTNYDQPLEQEELDRFRPLVIERAKGYSVASLTGTKDFMG 86 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + ++ PRP+TE LV+ L ++D +RILD+ TG G + L+LL P Sbjct: 87 LTFAVNDKVLIPRPDTETLVEYVL----STYHQQDAIRILDMCTGPGTILLSLLHYLPTA 142 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG---LFDVIVSNPPYIESVI 179 G+G+DIS ALEIA N + R + +SD FS +E LFDVIVSNPPYI Sbjct: 143 TGMGLDISRDALEIATKNQEAFKLENRSEFHESDMFSYLEHHNELFDVIVSNPPYIRLED 202 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 L +V + +P I+L GG DGL YR +A +L GL + E+GY+Q DV + Sbjct: 203 KKILSPDVLN-EPHIALFGGEDGLDFYRQLAMECVTYLKPYGLVAFEVGYDQAEDVKSLL 261 Query: 240 ESRK-LFLVNAFKDYGGNDRVLLFC 263 ES ++ D G +RV+ Sbjct: 262 ESVGSYVDISFAADLAGINRVVTAR 286 >gi|149377993|ref|ZP_01895718.1| hemK protein [Marinobacter algicola DG893] gi|149357702|gb|EDM46199.1| hemK protein [Marinobacter algicola DG893] Length = 282 Score = 273 bits (700), Expect = 1e-71, Method: Composition-based stats. Identities = 87/263 (33%), Positives = 124/263 (47%), Gaps = 9/263 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 D+ L VTG S P+ LD + + + + + +LG ++F++ Sbjct: 24 PRLDAELLLGFVTGWSRTTFRAWPERELDATLIARFSTLVEQRCEGHPVAHLLGEQEFWS 83 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L ++ T PRP+TE LV++ALA LP +LDLGTGTGA+ LAL E + Sbjct: 84 LPLKVNPSTLIPRPDTECLVEAALALDLPA-----NASVLDLGTGTGAIALALASERSGW 138 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVD 181 + D A+++A NA G+ QS+WFS + +FD+IVSNPPYI V Sbjct: 139 QVSACDAILAAVDLAIDNAARLGLP--VTVQQSNWFSDLPPAVFDLIVSNPPYIAGDDVH 196 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P +L G DGL R I L G +E GY Q V R+ Sbjct: 197 LGQGDVR-FEPASALVAGRDGLDDIRLIVAEAPDWLVGGGWLILEHGYEQGAAVRRLLIE 255 Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264 V +DYG DR L + Sbjct: 256 AGFASVETGQDYGQRDRFTLGRK 278 >gi|33152003|ref|NP_873356.1| protein-glutamine N-methyl transferase [Haemophilus ducreyi 35000HP] gi|33148225|gb|AAP95745.1| Protein-glutamine N-methyl transferase [Haemophilus ducreyi 35000HP] Length = 290 Score = 273 bits (700), Expect = 1e-71, Method: Composition-based stats. Identities = 89/262 (33%), Positives = 137/262 (52%), Gaps = 4/262 (1%) Query: 1 MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60 + D++ L VT S + ++ L Q LT + R K E I ILG ++F Sbjct: 24 LNPKIDANLLLQAVTKKSKAMLFAFGETHLSHDQLAELTLLLQRRQKGEPIAYILGEKEF 83 Query: 61 YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120 +++ L +S T PRP+TE +V+ AL ++ R+E++ + ILDLGTGTGA+ LAL E Sbjct: 84 WSLPLKVSKHTLIPRPDTERVVEIALDWAYKRLEQQTNLHILDLGTGTGAIALALASELG 143 Query: 121 F-FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESV 178 VDI +A+ +A+ N G + LQSDWF++++ FD+IVSNPPYI+ Sbjct: 144 DKAVITAVDIKAEAVSLAEENRQHLGFK-QVTFLQSDWFNALQSQQFDLIVSNPPYIDKT 202 Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238 + +VR F+P +L GLS I + +L G +E G+ Q V + Sbjct: 203 DENLKLGDVR-FEPLSALVSAQQGLSDLYKIIENAPLYLTAKGALILEHGWQQATAVQQF 261 Query: 239 FESRKLFLVNAFKDYGGNDRVL 260 F+ + +++DY G DRV Sbjct: 262 FQHYDWDEIQSWQDYAGLDRVT 283 >gi|251780834|ref|ZP_04823754.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243085149|gb|EES51039.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 287 Score = 273 bits (700), Expect = 1e-71, Method: Composition-based stats. Identities = 71/263 (26%), Positives = 121/263 (46%), Gaps = 7/263 (2%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 + D+ L +V +I + +D I + + + IL +F N Sbjct: 25 SRLDAELLLGKVLNKEKIYLITHREEKIDKIDEEKYMKLINKRKEKMPVKYILNECEFMN 84 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + + PR +TE+LV+ L I++ D +I DL G+GA+ ++L Sbjct: 85 MNFYVEPGVLIPRADTEILVEEVLE----NIDENDSKKICDLCCGSGAIGISLANLRKNI 140 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS---SVEGLFDVIVSNPPYIESVI 179 +D ++ N V +R + ++SD + + +D+IVSNPPYIE Sbjct: 141 NVDLIDYYEIPEKVTLINIKKYDVLDRTNFIKSDLLNKSINDAKKYDIIVSNPPYIEECE 200 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 ++ L +V++++P +L GG DGL Y+ I + LN+ G+ + EIGYNQ V + Sbjct: 201 INDLMDDVKNYEPHTALSGGRDGLDFYKRITEQSINVLNESGILAFEIGYNQGTAVKELM 260 Query: 240 ESRKLFLVNAFKDYGGNDRVLLF 262 E + V KD G DRV++ Sbjct: 261 EDKNFIEVKIVKDLAGLDRVVIG 283 >gi|89094906|ref|ZP_01167838.1| Methylase of polypeptide chain release factor [Oceanospirillum sp. MED92] gi|89080863|gb|EAR60103.1| Methylase of polypeptide chain release factor [Oceanospirillum sp. MED92] Length = 283 Score = 273 bits (700), Expect = 1e-71, Method: Composition-based stats. Identities = 84/258 (32%), Positives = 125/258 (48%), Gaps = 7/258 (2%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 D LC V + P+ L ++ L + R LK E + I+G R F++ Sbjct: 20 PQLDMQYLLCHVLDKPESYLFTWPERELQPGEQESLEQLLQRRLKGEPVAHIIGKRGFWS 79 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 L +S T PRP+TE+LV+ AL R++DLGTGTGAV LAL KE+P + Sbjct: 80 FELEVSPHTLIPRPDTEVLVEKALELC-----SLPAARVVDLGTGTGAVALALAKENPGW 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182 + D +A E+A+ N ++ LQ W+ G FD+IVSNPPYI+ Sbjct: 135 EVFASDYVKEAAELAERNRQRLHIT-NMQVLQGSWYEPHSGRFDMIVSNPPYIDPEDPHL 193 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 +VR F+P +L G++ IA LNK+G+ + E G++Q + ++ Sbjct: 194 DQGDVR-FEPLSALTAENQGMADIELIAKQGRNFLNKNGVLAFEHGFDQGPICRNLLQTL 252 Query: 243 KLFLVNAFKDYGGNDRVL 260 V +DYG N+RV Sbjct: 253 GYLEVGTQRDYGQNERVT 270 >gi|309390219|gb|ADO78099.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Halanaerobium praevalens DSM 2228] Length = 289 Score = 273 bits (700), Expect = 2e-71, Method: Composition-based stats. Identities = 74/262 (28%), Positives = 122/262 (46%), Gaps = 8/262 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 + D+ + + + + V D L R+ I + + + I+ ++F + Sbjct: 22 SRLDAEVLMADLLDMERINLYVKYDYPLKSREIDKYREMIKKRAQRIPVAYIIQKKEFMS 81 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + + PRP+TE LV+ + + + K +I+D+ TG+GA+ ++L Sbjct: 82 LEFKVEPGVLIPRPDTENLVEKVIKYCRQQGLKTP--QIIDVCTGSGAIAVSLAHYLQKA 139 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPYIESV 178 K VG DIS AL+IA+ N + ++ER L+SD D++VSNPPYI Sbjct: 140 KVVGTDISNSALKIARQNMKKHDLTERMSILKSDLLKEFIKREIKGIDILVSNPPYITEA 199 Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238 ++ L EV+ +P+ +L G DGL YR + + L G +EIGY Q V I Sbjct: 200 EMETLAPEVKK-EPKKALVAGKDGLDFYRRLIPEAEKVLKNGGKLFLEIGYQQAAAVREI 258 Query: 239 FESRKLFLVNAFKDYGGNDRVL 260 F + KDY NDR++ Sbjct: 259 F-GANWSEIEVEKDYSENDRIV 279 >gi|23502721|ref|NP_698848.1| hemK protein [Brucella suis 1330] gi|23348736|gb|AAN30763.1| hemK protein [Brucella suis 1330] Length = 283 Score = 273 bits (699), Expect = 2e-71, Method: Composition-based stats. Identities = 105/258 (40%), Positives = 150/258 (58%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 D+ + TG + ++ P+ ++ + L A+ R E +HRI+G R+FY + Sbjct: 18 LDARLLIEWATGATRLDLVSQPEKLIGSAEAEKLRAALERRAGGEPVHRIMGQREFYGLP 77 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 LS+ T EPRP+TE L++ + I + +LD+GTGTGA+ ++LL G Sbjct: 78 FRLSAQTLEPRPDTEALMELVIPVLEQLIARHGTAEVLDMGTGTGAIIISLLHRFEHMHG 137 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184 +GVD++ AL A+ NA+ NGV ERF L+SDWFS+V G F +IVSNPPYI + L Sbjct: 138 IGVDVAEGALATARINAIDNGVGERFAGLKSDWFSNVSGKFHLIVSNPPYIPHAEIAGLS 197 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 EVR+ DP +LDGG DGL Y+ +A GV +L KDG+ +VEIG Q DV +F+S Sbjct: 198 REVREHDPLAALDGGPDGLDFYKALAQGVGAYLYKDGMVAVEIGAGQFQDVEALFKSTGF 257 Query: 245 FLVNAFKDYGGNDRVLLF 262 L D GG+ R +LF Sbjct: 258 SLAGEANDLGGHRRAMLF 275 >gi|294678209|ref|YP_003578824.1| protein methyltransferase HemK [Rhodobacter capsulatus SB 1003] gi|294477029|gb|ADE86417.1| protein methyltransferase HemK [Rhodobacter capsulatus SB 1003] Length = 252 Score = 273 bits (699), Expect = 2e-71, Method: Composition-based stats. Identities = 92/251 (36%), Positives = 129/251 (51%), Gaps = 8/251 (3%) Query: 14 VTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFE 73 V + ++ + S L + + + + + +I G R F+ ++ T + Sbjct: 9 VMEVPPERLYLSIHSELSEDRHKQFLKCLAAREARQPVAQITGHRAFWKHEFRVTRATLD 68 Query: 74 PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133 PRPETELLV+ AL + R+LDLGTGTG + L+LL E P +GV DIS A Sbjct: 69 PRPETELLVEVALETAFE--------RVLDLGTGTGCILLSLLAERPAARGVATDISEAA 120 Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPR 193 L +A+ NA + ER +Q DWF VEG FD+IVSNPPYI + L +VRD++P Sbjct: 121 LAVAQENAERLSLYERAHFVQGDWFHGVEGRFDLIVSNPPYITEAEMAELAPDVRDWEPH 180 Query: 194 ISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDY 253 +L G DGL YR IA G L G ++EIG Q V + ++ V +D Sbjct: 181 TALTPGGDGLGAYRAIAFGAFARLKPGGRIALEIGPTQAAAVSAMLTAQGFADVEVRQDL 240 Query: 254 GGNDRVLLFCR 264 G DRV+L R Sbjct: 241 GHRDRVVLAHR 251 >gi|256112205|ref|ZP_05453126.1| methyltransferase, HemK family protein [Brucella melitensis bv. 3 str. Ether] gi|265993633|ref|ZP_06106190.1| modification methylase [Brucella melitensis bv. 3 str. Ether] gi|262764614|gb|EEZ10535.1| modification methylase [Brucella melitensis bv. 3 str. Ether] Length = 295 Score = 273 bits (699), Expect = 2e-71, Method: Composition-based stats. Identities = 106/258 (41%), Positives = 150/258 (58%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 D+ + TG + ++ P+ ++ + L A+ R E +HRI+G R+FY + Sbjct: 30 LDARLLIEWATGATRLDLVSQPEKLIGSAEAEKLRAALERRAGGEPVHRIMGQREFYGLP 89 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 LS+ T EPRP+TE LV+ + I + +LD+GTGTGA+ ++LL G Sbjct: 90 FRLSAQTLEPRPDTEALVELVIPVLEQLIARHGTAEVLDMGTGTGAIIISLLHRFEHMHG 149 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184 +GVD++ AL A+ NA+ NGV ERF L+SDWFS+V G F +IVSNPPYI + L Sbjct: 150 IGVDVAEGALATARINAIDNGVGERFAGLKSDWFSNVSGKFHLIVSNPPYIPHAEIAGLS 209 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 EVR+ DP +LDGG DGL Y+ +A GV +L KDG+ +VEIG Q DV +F+S Sbjct: 210 REVREHDPLAALDGGPDGLDFYKALAQGVGAYLYKDGMVAVEIGAGQFQDVGALFKSTGF 269 Query: 245 FLVNAFKDYGGNDRVLLF 262 L D GG+ R +LF Sbjct: 270 SLAGEANDLGGHRRAMLF 287 >gi|59802323|ref|YP_209035.1| hypothetical protein NGO2015 [Neisseria gonorrhoeae FA 1090] gi|59719218|gb|AAW90623.1| putative protoporphyrinogen oxidase [Neisseria gonorrhoeae FA 1090] Length = 285 Score = 273 bits (699), Expect = 2e-71, Method: Composition-based stats. Identities = 87/260 (33%), Positives = 122/260 (46%), Gaps = 12/260 (4%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 ++ L V+ + Q++ + D R R L E + ILG R+FY R Sbjct: 28 EARMLLQYVSEYTRVQLLTRGGEEMPDEIRQRADRLAQRRLNGEPVAYILGVREFYGRRF 87 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 T++ + PRPETE LV++ LA + R+ DLGTG+GAV + + E P Sbjct: 88 TVNPNVLIPRPETEHLVEAVLARL------PENGRVWDLGTGSGAVAVTVALERPDAFVR 141 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS---SVEGLFDVIVSNPPYIESVIVDC 182 DIS ALE A+ NA G R + WF E +D+IVSNPPYIE+ Sbjct: 142 ASDISTPALETARKNAADLGA--RVEFAHGSWFDTDMPSERQWDIIVSNPPYIENGDKHL 199 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 ++R F+P+I+L DGLS RT+A G L + G +E G++Q V + Sbjct: 200 SQGDLR-FEPQIALTDFSDGLSCIRTLAQGAPDRLAEGGFLLLEHGFDQGAAVRGVLAEN 258 Query: 243 KLFLVNAFKDYGGNDRVLLF 262 V D G DRV L Sbjct: 259 GFSGVEILPDLAGLDRVTLG 278 >gi|86138686|ref|ZP_01057259.1| modification methylase, HemK family protein [Roseobacter sp. MED193] gi|85824746|gb|EAQ44948.1| modification methylase, HemK family protein [Roseobacter sp. MED193] Length = 284 Score = 273 bits (699), Expect = 2e-71, Method: Composition-based stats. Identities = 95/262 (36%), Positives = 131/262 (50%), Gaps = 8/262 (3%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 RD+ L + + +V + L+ I + +LG R+FY Sbjct: 28 DPARDARILLAHAARIEASRVTLIAPEDLEPEVAERYEQLIALRAIRVPVSHLLGEREFY 87 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 R +S D +PRPETE L+++ALA R+LDLG G+G + + LL ESP Sbjct: 88 GRRFKVSKDVLDPRPETETLIEAALA--------EPFERVLDLGLGSGCILVTLLAESPQ 139 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181 G+GVD+S A A +NA+ + V R D QSDWFS+V G FD+IVSNPPYI + Sbjct: 140 ATGLGVDLSEAACLQASANAILHRVESRIDIQQSDWFSNVTGRFDLIVSNPPYIALDEMA 199 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 L EVR +P ++L G DGL+ YR +A GV HL G +EIG Q V + + Sbjct: 200 DLSPEVRQHEPDMALTDGGDGLAAYRALAAGVRAHLRSGGRLCLEIGPTQGQAVAAMMQE 259 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 L + D G DRV+ Sbjct: 260 AGLTNIAVLPDLDGRDRVVFAR 281 >gi|301060380|ref|ZP_07201243.1| protein-(glutamine-N5) methyltransferase, release factor-specific [delta proteobacterium NaphS2] gi|300445576|gb|EFK09478.1| protein-(glutamine-N5) methyltransferase, release factor-specific [delta proteobacterium NaphS2] Length = 299 Score = 273 bits (699), Expect = 2e-71, Method: Composition-based stats. Identities = 75/263 (28%), Positives = 132/263 (50%), Gaps = 4/263 (1%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 A ++ L + + ++ + L +++ I R L+HE + I G ++F+ Sbjct: 26 NARLNAEVLLAYQLQVQRISLYLNFEQPLTEKEVSGFRRLIKRRLEHEPLQYITGKQEFW 85 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 ++ ++ PRPETE+LV+ A+ + E+ +R LDLGTG+G + +A+ K+ P Sbjct: 86 SLSFQVNPHVLIPRPETEILVEQAMDLATALTEEGTQLRFLDLGTGSGVIAVAMAKQIPE 145 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESV 178 DIS KAL++A++NA +GVS +Q D F + + F +I SNPPY+ + Sbjct: 146 SLVFATDISGKALDVARANAQAHGVSSSITFIQGDLFEPLMLEKPAFHLIASNPPYVCTH 205 Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV-DVVR 237 + L E+ ++PR +LDGG DG+ + + I R L G +E+ Q + Sbjct: 206 EISGLQSEIALYEPRAALDGGKDGMDYLKEIIKQAPRFLLPGGWLLLEMSPFQVEKALFA 265 Query: 238 IFESRKLFLVNAFKDYGGNDRVL 260 + E+ +DY + RV+ Sbjct: 266 LAETDVYQNTKPVQDYSHHQRVI 288 >gi|119775697|ref|YP_928437.1| hemK family protein [Shewanella amazonensis SB2B] gi|119768197|gb|ABM00768.1| hemK family protein [Shewanella amazonensis SB2B] Length = 285 Score = 273 bits (699), Expect = 2e-71, Method: Composition-based stats. Identities = 88/259 (33%), Positives = 131/259 (50%), Gaps = 8/259 (3%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 D+ L G + + P+ L Q I R K + ILG R+F++++ Sbjct: 27 LDAEVLLQHCLGKNRTFLYTWPERPLTSEQWKHFEQLINRRAKGVPVAHILGEREFWSLK 86 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 ++ T PRP+TE+LV++AL LP D R+LD+GTGTGA+ LAL E P ++ Sbjct: 87 FLVNETTLIPRPDTEMLVETALNLPLP-----DNARVLDMGTGTGAIALALASERPNWRI 141 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCL 183 +D A+ +AK+N G+S + + LQSDWFS+V + FD+IVSNPPYI+ Sbjct: 142 TALDKVDDAVALAKANREQLGLS-QVEILQSDWFSAVRDADFDLIVSNPPYIDEHDEHLA 200 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 +VR F+P +L +G + IA HL G +E G+ Q + + S Sbjct: 201 MGDVR-FEPLSALTAADEGYADLNHIAMHAREHLKVGGYLLLEHGFAQALKLRETLVSLG 259 Query: 244 LFLVNAFKDYGGNDRVLLF 262 V +D+G NDR L Sbjct: 260 YDKVATVRDFGSNDRCTLG 278 >gi|332993698|gb|AEF03753.1| peptide release factor-glutamine N5-methyltransferase [Alteromonas sp. SN2] Length = 288 Score = 273 bits (699), Expect = 2e-71, Method: Composition-based stats. Identities = 88/263 (33%), Positives = 124/263 (47%), Gaps = 7/263 (2%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 D+ L V + PD L + + + + + G RDF+ Sbjct: 20 PAVDAKVLLSHVLDKPQVYLFTWPDKTLSVDAISQYKTLVAKRAQGIPVAYLTGSRDFWT 79 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRI----EKRDVVRILDLGTGTGAVCLALLKE 118 +RL S T PRP+TE+LV+ L+ + + + I DLGTGTGA+ LAL E Sbjct: 80 LRLATSPHTLIPRPDTEVLVEQTLSCIASAEFALEVEDNKLAICDLGTGTGAIALALASE 139 Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIES 177 P GVD+ +A+++A SNA N ++ QS WF ++ F VIVSNPPYIE Sbjct: 140 LPTANITGVDLLHEAVQLATSNAALNSIT-NAQFKQSSWFDNLANEKFHVIVSNPPYIEI 198 Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237 +VR F+P +L G DGL + I HL + GL + E G++Q V Sbjct: 199 SSPFLQQGDVR-FEPASALTSGADGLDDIKHIIALAPAHLLEGGLLAFEHGFDQAKAVGD 257 Query: 238 IFESRKLFLVNAFKDYGGNDRVL 260 + + V KDYGGNDRV Sbjct: 258 LLNAHGFVNVCTEKDYGGNDRVT 280 >gi|332184656|gb|AEE26910.1| modification methylase, HemK family [Francisella cf. novicida 3523] Length = 284 Score = 273 bits (699), Expect = 2e-71, Method: Composition-based stats. Identities = 84/258 (32%), Positives = 135/258 (52%), Gaps = 6/258 (2%) Query: 4 LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63 D +C V + + ++ D LD + I+R L E + ILG++ F+N Sbjct: 25 KHDLQMIICDVLDVDKTYLCINSDRRLDKNTLKEIDEKILRLLAGEPLAYILGYKYFWNQ 84 Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 +L ++ DT PR +TE+LV + L ++K ++ILDLGTGTGA+ LAL E + Sbjct: 85 KLYVTKDTLIPRADTEVLVSTVLDDI---VDKNAKLKILDLGTGTGAIGLALAAELVNSQ 141 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDC 182 V VD+ ++L++AK+NA N ++ +QS W++S++ G FD+IVSNPPYI+ Sbjct: 142 IVAVDLYQQSLDVAKNNAQANNIT-NVKFIQSSWYTSLDTGKFDIIVSNPPYIDLADT-N 199 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 + V++++P +L +GL+ + I LN GL +E G+ Q V +F Sbjct: 200 IEQSVKEYEPARALFAADNGLADIKEIISQAKNFLNPGGLVYIEHGFTQADAVTALFSQY 259 Query: 243 KLFLVNAFKDYGGNDRVL 260 + KD NDR Sbjct: 260 NFTDIKTVKDLNNNDRCT 277 >gi|329847925|ref|ZP_08262953.1| protein-glutamine-N5 methyltransferase, release factor-specific [Asticcacaulis biprosthecum C19] gi|328842988|gb|EGF92557.1| protein-glutamine-N5 methyltransferase, release factor-specific [Asticcacaulis biprosthecum C19] Length = 284 Score = 273 bits (699), Expect = 2e-71, Method: Composition-based stats. Identities = 94/260 (36%), Positives = 137/260 (52%), Gaps = 5/260 (1%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L T + +I DP L Q L + + R K E + RILG + F+ + L Sbjct: 27 DARLLLEAATDATRTDIITDPYRELTAEQEDTLNSYLDRRTKREPVARILGRKGFWKLLL 86 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 LS PRPETE++VD L S P D I DLG G+GA+ L++L E P KG+ Sbjct: 87 NLSDHVLIPRPETEVIVDMILKQSQP----SDAFTIADLGIGSGAILLSVLAERPAAKGL 142 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLG 184 G DIS +AL +A+ NA G+ R L++ W S + + FD++ SNPPYI S ++ L Sbjct: 143 GTDISEEALAVARDNAANLGLDGRAAFLRTSWGSGLADASFDIVASNPPYIRSDVIPTLD 202 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 EV++ DP ++LDGG GL+ Y +A + R L G +EIG++Q DV ++ Sbjct: 203 PEVKNHDPHLALDGGPTGLAAYEELAPEIFRLLKPGGRAWLEIGFDQSQDVEKLMNDAGF 262 Query: 245 FLVNAFKDYGGNDRVLLFCR 264 V + D RV+ + Sbjct: 263 LNVATWLDLSNLPRVVTATK 282 >gi|161619786|ref|YP_001593673.1| HemK family methyltransferase [Brucella canis ATCC 23365] gi|254704886|ref|ZP_05166714.1| HemK family methyltransferase [Brucella suis bv. 3 str. 686] gi|260567640|ref|ZP_05838110.1| methyltransferase [Brucella suis bv. 4 str. 40] gi|261755580|ref|ZP_05999289.1| modification methylase [Brucella suis bv. 3 str. 686] gi|161336597|gb|ABX62902.1| methyltransferase, HemK family [Brucella canis ATCC 23365] gi|260157158|gb|EEW92238.1| methyltransferase [Brucella suis bv. 4 str. 40] gi|261745333|gb|EEY33259.1| modification methylase [Brucella suis bv. 3 str. 686] Length = 295 Score = 273 bits (699), Expect = 2e-71, Method: Composition-based stats. Identities = 105/258 (40%), Positives = 150/258 (58%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 D+ + TG + ++ P+ ++ + L A+ R E +HRI+G R+FY + Sbjct: 30 LDARLLIEWATGATRLDLVSQPEKLIGSAEAEKLRAALERRAGGEPVHRIMGQREFYGLP 89 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 LS+ T EPRP+TE L++ + I + +LD+GTGTGA+ ++LL G Sbjct: 90 FRLSAQTLEPRPDTEALMELVIPVLEQLIARHGTAEVLDMGTGTGAIIISLLHRFEHMHG 149 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184 +GVD++ AL A+ NA+ NGV ERF L+SDWFS+V G F +IVSNPPYI + L Sbjct: 150 IGVDVAEGALATARINAIDNGVGERFAGLKSDWFSNVSGKFHLIVSNPPYIPHAEIAGLS 209 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 EVR+ DP +LDGG DGL Y+ +A GV +L KDG+ +VEIG Q DV +F+S Sbjct: 210 REVREHDPLAALDGGPDGLDFYKALAQGVGAYLYKDGMVAVEIGAGQFQDVEALFKSTGF 269 Query: 245 FLVNAFKDYGGNDRVLLF 262 L D GG+ R +LF Sbjct: 270 SLAGEANDLGGHRRAMLF 287 >gi|17986476|ref|NP_539110.1| methyltransferase [Brucella melitensis bv. 1 str. 16M] gi|260562789|ref|ZP_05833275.1| methyltransferase [Brucella melitensis bv. 1 str. 16M] gi|17982075|gb|AAL51374.1| methyltransferase [Brucella melitensis bv. 1 str. 16M] gi|260152805|gb|EEW87897.1| methyltransferase [Brucella melitensis bv. 1 str. 16M] Length = 295 Score = 273 bits (699), Expect = 2e-71, Method: Composition-based stats. Identities = 106/258 (41%), Positives = 150/258 (58%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 D+ + TG + ++ P+ ++ + L A+ R E +HRI+G R+FY + Sbjct: 30 LDARLLIEWATGATRLDLVSQPEKLIGSAEAEKLRAALERRAGGEPVHRIMGQREFYGLP 89 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 LS+ T EPRP+TE LV+ + I + +LD+GTGTGA+ ++LL G Sbjct: 90 FRLSAQTLEPRPDTEALVELVIPVLEQLIARHGTAEVLDMGTGTGAIIISLLHRFEHMHG 149 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184 +GVD++ AL A+ NA+ NGV ERF L+SDWFS+V G F +IVSNPPYI + L Sbjct: 150 IGVDVAEGALAKARINAIDNGVGERFAGLKSDWFSNVSGKFHLIVSNPPYIPHAEIAGLS 209 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 EVR+ DP +LDGG DGL Y+ +A GV +L KDG+ +VEIG Q DV +F+S Sbjct: 210 REVREHDPLAALDGGPDGLDFYKALAQGVGAYLYKDGMVAVEIGAGQFQDVEALFKSTGF 269 Query: 245 FLVNAFKDYGGNDRVLLF 262 L D GG+ R +LF Sbjct: 270 SLAGEANDLGGHRRAMLF 287 >gi|323702618|ref|ZP_08114280.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Desulfotomaculum nigrificans DSM 574] gi|323532437|gb|EGB22314.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Desulfotomaculum nigrificans DSM 574] Length = 285 Score = 273 bits (698), Expect = 2e-71, Method: Composition-based stats. Identities = 79/260 (30%), Positives = 124/260 (47%), Gaps = 7/260 (2%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 DS L +TGL +I D L Q + R E + + G ++F + Sbjct: 24 LDSQVLLSHITGLDRTGLITRGDQPLTPAQLQQYEKLLERRAGGEPVAYLTGHKEFMGLD 83 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 +S PRP+TEL+V+ A+ SL R + +D+GTG+GA+ + L P + Sbjct: 84 FIVSPAVLIPRPDTELMVERAV--SLLRQSGARPLPAVDVGTGSGAIAVTLAHLVPGLQV 141 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS----VEGLFDVIVSNPPYIESVIV 180 +DIS AL +A+ NA +GV++R Q + ++G VI +N PYI S + Sbjct: 142 YAIDISPDALAVARQNAARHGVADRVKFCQGNLLEPIPADLQGKVSVITANLPYIPSGDI 201 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 L +V+DF+PR++LDGG DGL+ YR + R L+ G +EIG Q + Sbjct: 202 SGLMTDVKDFEPRLALDGGPDGLALYRKLIPRAHRLLHPGGHLLMEIGPGQGAAAKALLP 261 Query: 241 SRKLFLVNAFKDYGGNDRVL 260 + D G +R++ Sbjct: 262 AASWT-ARLELDLAGRERLV 280 >gi|197104293|ref|YP_002129670.1| modification methylase HemK [Phenylobacterium zucineum HLK1] gi|196477713|gb|ACG77241.1| modification methylase HemK [Phenylobacterium zucineum HLK1] Length = 287 Score = 273 bits (698), Expect = 2e-71, Method: Composition-based stats. Identities = 93/260 (35%), Positives = 144/260 (55%), Gaps = 5/260 (1%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ + + ++ DP L Q L + + R K E + ILG + F+ + L Sbjct: 27 DARLLVEAAADATRADIVTDPYRPLTPEQEARLQDYLARREKREPVSHILGRKGFWKIML 86 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 ++ D PRP+TE +VD AL + +LDLG G+GA+ LA+L E P KG+ Sbjct: 87 RVTPDVLTPRPDTETVVDVALK----AFPEHAPWSVLDLGVGSGAILLAILAERPAAKGL 142 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLG 184 G+D S +AL +A+ NA G++ R L+ DW + + + FD++VSNPPYI S +++ L Sbjct: 143 GIDASEEALAVARDNAAALGLAGRTALLRGDWTAGLGDSAFDLVVSNPPYIASDVLETLE 202 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 EV+D++PR++L+GG DGL YR +A + R L G +VEIGY+QK V +F + Sbjct: 203 PEVKDYEPRLALEGGADGLDAYRILAPEIVRVLKPGGRFAVEIGYDQKDAVEALFRAAGA 262 Query: 245 FLVNAFKDYGGNDRVLLFCR 264 V +D DRV+ + Sbjct: 263 EDVRTIRDLADRDRVVAGAK 282 >gi|310779237|ref|YP_003967570.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Ilyobacter polytropus DSM 2926] gi|309748560|gb|ADO83222.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Ilyobacter polytropus DSM 2926] Length = 376 Score = 273 bits (698), Expect = 2e-71, Method: Composition-based stats. Identities = 76/265 (28%), Positives = 129/265 (48%), Gaps = 7/265 (2%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDF 60 ++ V + + +D + + ++ + I++ + + + ILG +F Sbjct: 116 NPKLEAEYIFSHVLKTNRLTLTLDFTRKISEEEKKLIKEMIIKRARDKKPLQYILGEEEF 175 Query: 61 YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120 + + + PRPETELLV+ + + ILD+G G+GA+ + L K+ P Sbjct: 176 FGYKFKVDERVLIPRPETELLVEQCIVL----MSDVKTPFILDIGVGSGAISVTLGKKIP 231 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVI 179 K +GVDIS ALE+A N N V ++SD F +V FD+IVSNPPYI Sbjct: 232 TSKVLGVDISDGALEVANQNKELNNVK-NVKFIKSDVFENVSYKEFDMIVSNPPYIPEKE 290 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 L EV+ ++P+++L +GL Y+ I S +L G+ + E+GYNQ V + Sbjct: 291 YKILMHEVKKYEPKLALTAEDEGLYFYKLITKKASDYLKNGGVLAFEVGYNQAQKVKNMM 350 Query: 240 ESRKLFLVNAFKDYGGNDRVLLFCR 264 E + + KDY +R+++ + Sbjct: 351 EDNEFENIVIVKDYHQIERIVIGKK 375 >gi|90422035|ref|YP_530405.1| HemK family modification methylase [Rhodopseudomonas palustris BisB18] gi|90104049|gb|ABD86086.1| modification methylase, HemK family [Rhodopseudomonas palustris BisB18] Length = 291 Score = 273 bits (698), Expect = 2e-71, Method: Composition-based stats. Identities = 102/263 (38%), Positives = 138/263 (52%), Gaps = 4/263 (1%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A D+ + V GL ++V +L Q L + R L E + RI+G ++F+ Sbjct: 29 AELDARLLIGAVLGLDLTGLMVGAARLLTPEQASQLDALVTRRLAGEPVARIVGIKEFWG 88 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L L DT PRP+TE +V++AL R RI DLGTG+GA+ LALL E P Sbjct: 89 LPLALCGDTLVPRPDTETIVEAALQLFAGR---PAPQRIADLGTGSGAILLALLSEWPQA 145 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182 GV DIS AL A++NA G+ +R + D+ S++ G FD+IVSNPPYI S + Sbjct: 146 CGVASDISVAALHTARANAARLGLGDRAAFVACDYASALRGPFDLIVSNPPYIRSADIAA 205 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 L EVRD DPR +LDGG DGL+ YRTI + L+ G VEIG Q +V + + Sbjct: 206 LDREVRDHDPRRALDGGADGLAAYRTITTQAAGLLSPGGALIVEIGQGQGDEVSALMRAA 265 Query: 243 KLFLVN-AFKDYGGNDRVLLFCR 264 L D G R + R Sbjct: 266 GLTTDRPPTPDLAGIGRAVTGRR 288 >gi|188992911|ref|YP_001904921.1| Protein methyltransferase HemK [Xanthomonas campestris pv. campestris str. B100] gi|167734671|emb|CAP52881.1| Protein methyltransferase HemK [Xanthomonas campestris pv. campestris] Length = 283 Score = 273 bits (698), Expect = 2e-71, Method: Composition-based stats. Identities = 77/262 (29%), Positives = 118/262 (45%), Gaps = 7/262 (2%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A D+ L G + + Q + R + E + + G R F+ Sbjct: 22 ARSDAEPLLLHALGRDRAWLFAHGRDPVPAEQAQRFGALVERRHQGEPVAYLTGSRGFWT 81 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +S+ T PR +TE LV+ AL R+++ +R+ DLGTG+GA+ LA+ E P Sbjct: 82 LDLAVSTATLIPRADTETLVELALE----RLQQTASIRVADLGTGSGAIALAIASERPQA 137 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181 + + D S AL IA+ NA +G+ + W + G FD+I SNPPYI + Sbjct: 138 QLIATDASADALAIARHNAHAHGL-HNVECRLGHWLQPLAGERFDLIASNPPYIAATDPH 196 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 ++R ++P +L G DGL R I HL G +E G++Q V + + Sbjct: 197 LQQGDLR-YEPASALASGSDGLDDIRLIVADAPAHLLPGGWLLLEHGWDQGEAVAALLTA 255 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 R V +D DRV L Sbjct: 256 RGFAAVATHQDLEQRDRVTLGQ 277 >gi|167625122|ref|YP_001675416.1| HemK family modification methylase [Shewanella halifaxensis HAW-EB4] gi|167355144|gb|ABZ77757.1| modification methylase, HemK family [Shewanella halifaxensis HAW-EB4] Length = 280 Score = 272 bits (697), Expect = 3e-71, Method: Composition-based stats. Identities = 81/262 (30%), Positives = 129/262 (49%), Gaps = 8/262 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A D+ L V + PD L+ Q F + + L+ I I+G R+F++ Sbjct: 23 ASLDAEVMLLHVINKPRSYLYTWPDRSLEPEQVFEFKQMLAKRLRGNPIAHIVGEREFWS 82 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + ++ T PRP+TE+LV++AL + + ++LDLGTGTGA+ L+L E + Sbjct: 83 LPFRVNPTTLIPRPDTEILVETAL-----NLPLAENAKVLDLGTGTGAIALSLAHERNEW 137 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181 + +D A+ +AK N + E+ D QSDWF +VE F++IVSNPPYI+ Sbjct: 138 QVCAIDKVEDAVALAKVNRANLKL-EQVDVFQSDWFDAVECYDFNLIVSNPPYIDEEDEH 196 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P+ +L + G + IA+ +L G +E GY Q +++ Sbjct: 197 LSQGDVR-FEPQSALTAPLKGFADLFHIAESARDYLAPGGYLLLEHGYQQAIELREKLIE 255 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 V +D+G NDR L Sbjct: 256 LGYENVATVRDFGSNDRCTLGR 277 >gi|302390588|ref|YP_003826409.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Thermosediminibacter oceani DSM 16646] gi|302201216|gb|ADL08786.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Thermosediminibacter oceani DSM 16646] Length = 290 Score = 272 bits (697), Expect = 3e-71, Method: Composition-based stats. Identities = 75/260 (28%), Positives = 122/260 (46%), Gaps = 9/260 (3%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 D+ L V G+ + + P+ L + + + + I G ++F+ + Sbjct: 24 LDAEVILANVLGVRRIDLFIHPERRLCAEEIRTYRALVEKRSSRVPVAYITGSKEFFTLD 83 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 + PRPETE LV+ L RI ++++L G+GAV +++ Sbjct: 84 FHVREGVLIPRPETEFLVEEILR----RISWVTKPKVVELCCGSGAVAVSVAFFKKDAVV 139 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIESVIV 180 DIS A ++ NAV +GV +R L+ D + E G FDV+ +NPPYI S + Sbjct: 140 YASDISETAGDVTLLNAVKHGVEDRVLFLKGDLWEPFEAEGLGDFDVVAANPPYIPSGEI 199 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 + L +V+ ++PR++LDGG DGL YR I G R L G +E G +Q + + + Sbjct: 200 ENLPEDVK-YEPRVALDGGPDGLKFYRRIIAGAPRFLKPGGSIVLEFGKDQAGQIADLLK 258 Query: 241 SRKLFLVNAFKDYGGNDRVL 260 + KDY G +RV+ Sbjct: 259 RAGFGGIKILKDYAGLERVI 278 >gi|188589649|ref|YP_001919882.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Clostridium botulinum E3 str. Alaska E43] gi|188499930|gb|ACD53066.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Clostridium botulinum E3 str. Alaska E43] Length = 288 Score = 272 bits (697), Expect = 3e-71, Method: Composition-based stats. Identities = 70/263 (26%), Positives = 121/263 (46%), Gaps = 7/263 (2%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 + D+ L +V +I + +D I + + + IL +F N Sbjct: 26 SRLDAELLLGKVLNKEKIYLITHREEKIDKVNEEKYMKLISKRKEKMPVKYILNECEFMN 85 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + + PR +TE+LV+ L I++ D +I DL G+GA+ ++L Sbjct: 86 MNFYVEPGVLIPRADTEILVEEVLK----NIDENDSKKICDLCCGSGAIGISLANLRKNI 141 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS---SVEGLFDVIVSNPPYIESVI 179 +D ++ N + +R + ++SD + + +D+IVSNPPYIE Sbjct: 142 NVDLIDYYEIPEKVTLINIKKYDILDRTNFIKSDLLNKSINDAKKYDIIVSNPPYIEECE 201 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 ++ L +V++++P +L GG DGL Y+ I + LN+ G+ + EIGYNQ V + Sbjct: 202 INDLMDDVKNYEPHTALSGGRDGLDFYKRITEQSINVLNESGILAFEIGYNQGTAVKELM 261 Query: 240 ESRKLFLVNAFKDYGGNDRVLLF 262 E + V KD G DRV++ Sbjct: 262 EEKNFIEVKIVKDLAGLDRVVIG 284 >gi|78189388|ref|YP_379726.1| modification methylase HemK [Chlorobium chlorochromatii CaD3] gi|78171587|gb|ABB28683.1| Modification methylase HemK [Chlorobium chlorochromatii CaD3] Length = 297 Score = 272 bits (697), Expect = 3e-71, Method: Composition-based stats. Identities = 76/264 (28%), Positives = 124/264 (46%), Gaps = 8/264 (3%) Query: 7 SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66 + L V S ++ + D+ + + + + L+ + I G + FY Sbjct: 32 AERLLGHVLQKSRLELYLHHDAPISPSELEQFRSFCRQRLQGRPVQYITGEQYFYGAPFF 91 Query: 67 LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126 + PRPETELLV+ AL S +V +LD+GTG+G + + L +P + V Sbjct: 92 VDERVLIPRPETELLVERALEVSGVSALAGEVA-VLDVGTGSGCIAVTLATLAPNLRIVA 150 Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPPYIESVIV 180 VD+S AL++A+ NA +GV+ R +Q+D S + +I+SNPPYI Sbjct: 151 VDLSPAALDVARLNAERHGVTNRMTFVQADMTSPYFAQQLPFATYQLIISNPPYIPKAEW 210 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 L EVRDF+P ++L G+ Y+ + L G ++E+ + V + E Sbjct: 211 ATLEREVRDFEPELALTT-PSGMECYQALISAAPTLLADGGTLALELHADGARAVATMLE 269 Query: 241 SRKLFLVNAFKDYGGNDRVLLFCR 264 S L V KDYGG +R++ + Sbjct: 270 SAGLQEVALMKDYGGFERIITARK 293 >gi|257467858|ref|ZP_05631954.1| methyltransferase [Fusobacterium ulcerans ATCC 49185] gi|317062147|ref|ZP_07926632.1| methyltransferase [Fusobacterium ulcerans ATCC 49185] gi|313687823|gb|EFS24658.1| methyltransferase [Fusobacterium ulcerans ATCC 49185] Length = 372 Score = 272 bits (697), Expect = 3e-71, Method: Composition-based stats. Identities = 75/264 (28%), Positives = 133/264 (50%), Gaps = 7/264 (2%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDFY 61 D+ + ++ + ++ + +++ ++ + + K + + +LG +FY Sbjct: 110 PKLDAEYIFAHILDVNRLTLTLNFNKKIEEEKKEKIREYLKLRGKNRKPLQYLLGEWEFY 169 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 + PR +TE+LV+ + + + ++LD+GTG+GA+ ++L KE Sbjct: 170 GYPFKVDERVLIPRSDTEILVEQCKII----LNELEAPKVLDIGTGSGAIAISLGKECAH 225 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIV 180 G DIS ALE+AK+N N + E ++SD FSS + FD+IVSNPPYI Sbjct: 226 SDITGADISEGALEVAKANGELNKI-ENVKFIKSDVFSSFKDMKFDLIVSNPPYIPLEEY 284 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 + L EV +++P +L +G Y I+ +LN+ G + E+GYNQ V + E Sbjct: 285 NELMPEVLNYEPSSALTDNGNGYYFYSKISKEACDYLNEGGFLAFEVGYNQAEVVKELME 344 Query: 241 SRKLFLVNAFKDYGGNDRVLLFCR 264 +++ KDYGG DRV++ + Sbjct: 345 ENGFDVLSIVKDYGGIDRVVIGKK 368 >gi|229828876|ref|ZP_04454945.1| hypothetical protein GCWU000342_00961 [Shuttleworthia satelles DSM 14600] gi|229792039|gb|EEP28153.1| hypothetical protein GCWU000342_00961 [Shuttleworthia satelles DSM 14600] Length = 284 Score = 272 bits (697), Expect = 3e-71, Method: Composition-based stats. Identities = 82/270 (30%), Positives = 130/270 (48%), Gaps = 15/270 (5%) Query: 4 LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63 D+ L +G +I+ + D + I R + + +I G + F + Sbjct: 10 ALDAGYLLEFASGRRHVDLILSDGEQMPDALLGKYRSCIERRAQRIPLQQITGSQAFMGL 69 Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLP---------RIEKRDVVRILDLGTGTGAVCLA 114 ++ PR +TE LV+ L + +R+LDL TG+G + ++ Sbjct: 70 DFMVNEHVLCPRQDTETLVEEGLTILASLQSGSVKNRQANADREIRLLDLCTGSGCILIS 129 Query: 115 LLKESPF----FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170 LL + G+ D+S +AL +A+ NA NGVS F + SD F+ +EG FD+I + Sbjct: 130 LLALARGQETPIHGLAADLSPEALAVARENAKRNGVSAAF--VLSDLFAEIEGSFDLITA 187 Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230 NPPYI S ++ L EVRD +PR++LDG DGL+ YR IA +L + G +EI ++ Sbjct: 188 NPPYIPSGQLEDLMPEVRDHEPRMALDGDEDGLAFYRRIAGQAPDYLREGGWLLMEIAFD 247 Query: 231 QKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 Q V ++ + +D G DRVL Sbjct: 248 QGQAVRQMLADGPFEEIEIIQDLSGRDRVL 277 >gi|319942225|ref|ZP_08016541.1| N5-glutamine methyltransferase [Sutterella wadsworthensis 3_1_45B] gi|319804278|gb|EFW01170.1| N5-glutamine methyltransferase [Sutterella wadsworthensis 3_1_45B] Length = 276 Score = 272 bits (697), Expect = 3e-71, Method: Composition-based stats. Identities = 78/261 (29%), Positives = 122/261 (46%), Gaps = 13/261 (4%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 ++ L V G +I ++ L + Q + + + G ++F+ Sbjct: 25 EAMILLGFVIGKPREYLIAHDEAELTEDQILQFDMLVDMRAAGTPVPYLTGSQEFFGRHF 84 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 ++ PRP+TE+LV+ AL + ++LDLGTG+G + + L E + Sbjct: 85 HVTDAVLIPRPDTEVLVEQAL------LVVAGNPKVLDLGTGSGCIGITLALEISGAQVT 138 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVDCL 183 D S ALEIA+ NA ++ + + + W+ ++ FD+IVSNPPYI Sbjct: 139 ATDASEAALEIARGNAAE--LAAKVEFREGFWWDALVPNSQFDLIVSNPPYIRPDDDHLR 196 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 LE ++P +L GI+GL + IADG HL G +E GY+Q +V + E Sbjct: 197 NLE---YEPLQALTDGINGLECLQAIADGAIAHLTPGGWLLLEHGYDQGAEVRAMLEQAG 253 Query: 244 LFLVNAFKDYGGNDRVLLFCR 264 V KDYGGNDRV + R Sbjct: 254 FAAVRTKKDYGGNDRVTMGRR 274 >gi|254482780|ref|ZP_05096017.1| protein-(glutamine-N5) methyltransferase, release factor-specific [marine gamma proteobacterium HTCC2148] gi|214036861|gb|EEB77531.1| protein-(glutamine-N5) methyltransferase, release factor-specific [marine gamma proteobacterium HTCC2148] Length = 277 Score = 272 bits (697), Expect = 3e-71, Method: Composition-based stats. Identities = 80/259 (30%), Positives = 126/259 (48%), Gaps = 8/259 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 RD+ L + P++ + + R + E + + G R+F++ Sbjct: 19 PARDAEILLGHCLDKPRSWLYTWPEAEVSGEALTCFQQLLQRRYRGEPVAYLTGHREFWS 78 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L ++ T PRPETE LV+ AL LP D LDLGTGTGA+ LAL E P + Sbjct: 79 LDLAVAPSTLIPRPETETLVEWALELPLP-----DDTVALDLGTGTGAIALALANEKPGW 133 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181 + G D++ A+++A +NA+ N ++ R + +QSDWF VE F+++VSNPPY+E Sbjct: 134 RVCGADVNIDAVQLASNNALANNLA-RVEFIQSDWFDGVEDKLFNLLVSNPPYVEEGDAH 192 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P +L GL+ I +L G +E G++Q V + Sbjct: 193 LSEGDVR-FEPLEALVAADRGLADLDHIVKSSPNYLQTRGWLLLEHGFDQAPAVRELLVR 251 Query: 242 RKLFLVNAFKDYGGNDRVL 260 R V +D G +R+ Sbjct: 252 RGFKGVETRQDLAGQERIT 270 >gi|149925824|ref|ZP_01914088.1| modification methylase, HemK family protein [Limnobacter sp. MED105] gi|149825941|gb|EDM85149.1| modification methylase, HemK family protein [Limnobacter sp. MED105] Length = 307 Score = 272 bits (696), Expect = 4e-71, Method: Composition-based stats. Identities = 78/266 (29%), Positives = 121/266 (45%), Gaps = 7/266 (2%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A + + +TG ++ + L Q + + + E I ++ ++FY+ Sbjct: 23 APSELRILMTHITGFDRVGLVTKGNRELPMDQLSAFKSLAAKRQQGEPIAYLVQQKEFYS 82 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + PRPETE LV+ AL F + + + R+LD+G G+GA+ ++L E+P Sbjct: 83 RPFFVDPRVLIPRPETEELVEHALGFLQSKSTENLLTRVLDIGCGSGAIAVSLALENPIL 142 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-----FDVIVSNPPYIES 177 + DIS AL +A+ NA G ++ LQSD F ++ FD+I SNPPYIE Sbjct: 143 EVTATDISADALWVAQFNANELG-AKNIRFLQSDLFENLLNQTPPLAFDLICSNPPYIEL 201 Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237 ++R F+P+ +L G DGL YR IA L G VE G+ Q+ V Sbjct: 202 GDEHLSQGDLR-FEPQQALTDGGDGLHFYREIAQHSPSLLRAGGGVLVEHGHTQQEAVKA 260 Query: 238 IFESRKLFLVNAFKDYGGNDRVLLFC 263 +F V D G R + Sbjct: 261 LFSKAPYVDVQGLPDLAGTPRFVFAR 286 >gi|126739407|ref|ZP_01755100.1| modification methylase, HemK family protein [Roseobacter sp. SK209-2-6] gi|126719507|gb|EBA16216.1| modification methylase, HemK family protein [Roseobacter sp. SK209-2-6] Length = 287 Score = 272 bits (696), Expect = 4e-71, Method: Composition-based stats. Identities = 95/262 (36%), Positives = 131/262 (50%), Gaps = 8/262 (3%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 RD+ L + + +V + L+ I + ++G R+FY Sbjct: 31 DPARDARILLAHAARIEASRVTLIAPEELEPEVAERYEQLISLRAIRVPVSHLIGEREFY 90 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 R +S D +PRPETE L+++ALA + R+LDLG G+G + + LL E P Sbjct: 91 GRRFKVSGDVLDPRPETECLIEAALA--------QPFERVLDLGLGSGCILVTLLAEQPK 142 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181 G GVD+S A A +NAV + V ER D QSDWFS+V G FD++VSNPPYI + Sbjct: 143 ASGFGVDLSEAACLQASANAVLHRVEERIDIQQSDWFSNVTGQFDLVVSNPPYIALPEMQ 202 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 L EVR +P ++L G DGL YR IA V HL G +EIG +Q DV + Sbjct: 203 DLSPEVRSHEPEMALTDGGDGLGAYRQIAASVREHLLPGGRLLLEIGPSQGRDVTALLAE 262 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 L + D G DRV++ Sbjct: 263 AGLLEIRVLPDLDGRDRVVVAQ 284 >gi|254492179|ref|ZP_05105353.1| methyltransferase, HemK family [Methylophaga thiooxidans DMS010] gi|224462504|gb|EEF78779.1| methyltransferase, HemK family [Methylophaga thiooxydans DMS010] Length = 278 Score = 272 bits (696), Expect = 4e-71, Method: Composition-based stats. Identities = 84/259 (32%), Positives = 130/259 (50%), Gaps = 9/259 (3%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D LC V + ++ V P+ L+ +Q + R + E + + G R F+++ L Sbjct: 25 DVQILLCHVLDCTPTRLHVSPEHELEAQQWQLFNQLVERRKQGEPVAHLTGSRGFWSLDL 84 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 + + T PRP+TELLV AL+ P + ++DLGTGTGA+ L+L E + Sbjct: 85 LVDNSTLIPRPDTELLVSLALSKIKPNM------TVVDLGTGTGAIALSLAAEKADIDVI 138 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLG 184 D S AL++A+ NA + + E+ + W + FD++VSNPPYIE Sbjct: 139 ATDFSFAALQLAQKNANRHAL-EQVRFINMSWLVGFKSASFDLVVSNPPYIEMRDPHLNQ 197 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 +VR F+P +L G DGL R I ++ L KDG VE GY Q V ++F Sbjct: 198 GDVR-FEPLSALVSGPDGLEDIRQIVVQAAKCLKKDGWLLVEHGYQQSAAVQQLFTDAGF 256 Query: 245 FLVNAFKDYGGNDRVLLFC 263 ++A +D+GG DR ++ Sbjct: 257 EHISAHQDFGGQDRAVMGQ 275 >gi|51891212|ref|YP_073903.1| putative protoporphyrinogen oxidase [Symbiobacterium thermophilum IAM 14863] gi|51854901|dbj|BAD39059.1| putative protoporphyrinogen oxidase [Symbiobacterium thermophilum IAM 14863] Length = 305 Score = 272 bits (696), Expect = 4e-71, Method: Composition-based stats. Identities = 85/265 (32%), Positives = 126/265 (47%), Gaps = 4/265 (1%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 A R++ L V G + ++ L + R E + ILG +F Sbjct: 37 DAEREAAWLLAHVLGCRAGALVARRSEPLAPEASDEYAALVARRAAREPLQYILGTEEFM 96 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLP-RIEKRDVVRILDLGTGTGAVCLALLKESP 120 + ++ PR +T LV+ A+A E R V+R+ D+GTG+GA+ +A+ P Sbjct: 97 GLTFRVTPAVLIPRLDTAALVEQAVARLTGGAAEARGVLRVADIGTGSGAIAVAVAHLLP 156 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIES 177 + V VD+S +AL +A NA NGV++R Q D + + G F I+SNPPYI Sbjct: 157 HAQVVAVDLSPEALAVAAENARLNGVADRVRFRQGDLLAPLAEEGGRFAAILSNPPYIRE 216 Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237 + L EVRD++PR++L G DGL+ YR +A L G VE+G Q V Sbjct: 217 DEIAGLMPEVRDWEPRLALVAGDDGLAFYRRLAREAPAFLEPGGFLGVEVGIGQAPAVAA 276 Query: 238 IFESRKLFLVNAFKDYGGNDRVLLF 262 +F L V +D G DR +L Sbjct: 277 LFREAGLKDVAVCRDTAGVDRAVLG 301 >gi|330951101|gb|EGH51361.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Pseudomonas syringae Cit 7] Length = 277 Score = 272 bits (696), Expect = 4e-71, Method: Composition-based stats. Identities = 80/250 (32%), Positives = 123/250 (49%), Gaps = 7/250 (2%) Query: 16 GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75 G + P+ ++ + R K E + ILG + F+ + L ++ T PR Sbjct: 32 GKPRSFLHTWPERIVSTEAAVAFAGYMERRRKGEPVAYILGQQGFWKLDLEVAPHTLIPR 91 Query: 76 PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135 PETE+LV++AL + ++LDLGTGTGA+ LAL E +K VD +A+ Sbjct: 92 PETEMLVEAALEL----VPAFAPAQVLDLGTGTGAIALALANERQQWKVTAVDRVPEAVA 147 Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194 +A+ N + + +S WFS ++G FD+I+SNPPYI +VR F+P Sbjct: 148 LAERNRQRLQL-NNAEVFESHWFSGLQGRQFDLIISNPPYISDADPHLSAGDVR-FEPSS 205 Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYG 254 +L G DGL RTI + HLN DG +E GY+Q V + + +D G Sbjct: 206 ALVAGSDGLDDLRTIIEQAPAHLNADGWLLLEHGYDQGPAVRELLIREGFERIQTRRDLG 265 Query: 255 GNDRVLLFCR 264 ++R+ C+ Sbjct: 266 EHERITFGCK 275 >gi|261378642|ref|ZP_05983215.1| protein-(glutamine-N5) methyltransferase [Neisseria cinerea ATCC 14685] gi|269144979|gb|EEZ71397.1| protein-(glutamine-N5) methyltransferase [Neisseria cinerea ATCC 14685] Length = 273 Score = 272 bits (696), Expect = 4e-71, Method: Composition-based stats. Identities = 84/263 (31%), Positives = 121/263 (46%), Gaps = 12/263 (4%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 ++ L G S +++ + D R + R L E + ILG R+FY Sbjct: 13 PKNEARMLLQHAGGYSRIELVTRGGDEMPDSVRQHADMLVQRRLNGEPVAYILGVREFYG 72 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 R T++ PRPETE LV++A+ + I DLGTG+GAV L + E P Sbjct: 73 RRFTVNPSVLIPRPETEHLVEAAIGRL------PECGSIWDLGTGSGAVALTVALERPDA 126 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS---SVEGLFDVIVSNPPYIESVI 179 DIS ALE A+ NA G + + WF E +DVIVSNPPYIE+ Sbjct: 127 FVRASDISLSALETARKNAADLGAA--VEFAHGSWFDTDMPSERQWDVIVSNPPYIENGD 184 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 + ++R F+P+ +L DG+S R +A+G ++L G +E G+NQ V + Sbjct: 185 IHLSQGDLR-FEPKNALTDFSDGMSCIRALAEGAPKYLADGGFLLLEHGFNQGGAVRGVL 243 Query: 240 ESRKLFLVNAFKDYGGNDRVLLF 262 + V D G DRV Sbjct: 244 AAHGFTEVETLTDLAGLDRVTFG 266 >gi|240013153|ref|ZP_04720066.1| HemK [Neisseria gonorrhoeae DGI18] gi|240081797|ref|ZP_04726340.1| HemK [Neisseria gonorrhoeae FA19] gi|240114077|ref|ZP_04728567.1| HemK [Neisseria gonorrhoeae MS11] gi|240116887|ref|ZP_04730949.1| HemK [Neisseria gonorrhoeae PID1] gi|240120224|ref|ZP_04733186.1| HemK [Neisseria gonorrhoeae PID24-1] gi|240122522|ref|ZP_04735478.1| HemK [Neisseria gonorrhoeae PID332] gi|240126630|ref|ZP_04739516.1| HemK [Neisseria gonorrhoeae SK-92-679] gi|240127232|ref|ZP_04739893.1| HemK [Neisseria gonorrhoeae SK-93-1035] gi|260441507|ref|ZP_05795323.1| HemK [Neisseria gonorrhoeae DGI2] Length = 273 Score = 272 bits (696), Expect = 4e-71, Method: Composition-based stats. Identities = 87/260 (33%), Positives = 122/260 (46%), Gaps = 12/260 (4%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 ++ L V+ + Q++ + D R R L E + ILG R+FY R Sbjct: 16 EARMLLQYVSEYTRVQLLTRGGEEMPDEIRQRADRLAQRRLNGEPVAYILGVREFYGRRF 75 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 T++ + PRPETE LV++ LA + R+ DLGTG+GAV + + E P Sbjct: 76 TVNPNVLIPRPETEHLVEAVLARL------PENGRVWDLGTGSGAVAVTVALERPDAFVR 129 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS---SVEGLFDVIVSNPPYIESVIVDC 182 DIS ALE A+ NA G R + WF E +D+IVSNPPYIE+ Sbjct: 130 ASDISTPALETARKNAADLGA--RVEFAHGSWFDTDMPSERQWDIIVSNPPYIENGDKHL 187 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 ++R F+P+I+L DGLS RT+A G L + G +E G++Q V + Sbjct: 188 SQGDLR-FEPQIALTDFSDGLSCIRTLAQGAPDRLAEGGFLLLEHGFDQGAAVRGVLAEN 246 Query: 243 KLFLVNAFKDYGGNDRVLLF 262 V D G DRV L Sbjct: 247 GFSGVEILPDLAGLDRVTLG 266 >gi|56476055|ref|YP_157644.1| protein-glutamine N-methyltransferase [Aromatoleum aromaticum EbN1] gi|56312098|emb|CAI06743.1| Protein-glutamine N-methyltransferase [Aromatoleum aromaticum EbN1] Length = 280 Score = 272 bits (696), Expect = 4e-71, Method: Composition-based stats. Identities = 81/258 (31%), Positives = 127/258 (49%), Gaps = 8/258 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A+ D+ L V S+ ++ P++ L+ + + + R E + + G R+F+ Sbjct: 22 AVVDARILLRHVLQCSAARLAAYPEARLEAPEWAEFRSLVERREAGEPVAYLTGEREFFG 81 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 ++ PRP+TELLV+ ALA + R+LDLGTG+GA+ ++L E P Sbjct: 82 HPFIVTPAVLIPRPDTELLVELALA----HFGDKPHTRVLDLGTGSGALAISLALELPQA 137 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVD 181 V VD S +AL +A +NA S + DWFSS+ + + +IV+NPPYI + Sbjct: 138 DVVAVDRSREALWVAMANAARLRAS--ISFVLGDWFSSLGDDHYQLIVANPPYIAAADPH 195 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P +L G DGL IA RHL G +E G++Q V + Sbjct: 196 LDEGDVR-FEPSTALVAGPDGLDDLAAIAAQAPRHLEPGGWLFMEHGFDQAAAVRGLLTD 254 Query: 242 RKLFLVNAFKDYGGNDRV 259 + ++KD G +RV Sbjct: 255 GGFSSIASWKDLAGIERV 272 >gi|237740337|ref|ZP_04570818.1| methyltransferase [Fusobacterium sp. 2_1_31] gi|229422354|gb|EEO37401.1| methyltransferase [Fusobacterium sp. 2_1_31] Length = 369 Score = 271 bits (695), Expect = 5e-71, Method: Composition-based stats. Identities = 80/265 (30%), Positives = 136/265 (51%), Gaps = 8/265 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDFY 61 AL D+ +S + + + + + + ++ K + + ILG +FY Sbjct: 91 ALVDTEYIFSEALKVSRNTLKYSMSREIKEEDKNKIREMLMLRAKSRKPLQYILGEWEFY 150 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 + + + PRP+TE+LV+ + + + + ILD+G+G+GA+ +A+ E Sbjct: 151 GLPFKVRENVLIPRPDTEILVEQCI----QLMREIEEPNILDIGSGSGAISIAIANELKS 206 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVI 179 G+DI+ A+ +A N V N V E + ++SD F ++ +D+IVSNPPYI Sbjct: 207 SSVTGLDINEDAIRLANENKVLNKV-ENVNFMKSDLFEKLDEDFKYDLIVSNPPYITKEE 265 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 + L EV++F+P+ +L DGL YR I+ +L G + EIGY Q +V +I Sbjct: 266 YETLMPEVKNFEPKNALTDLGDGLHFYREISKKAESYLKDTGYLAFEIGYKQAKEVSKIL 325 Query: 240 ESRKLFLVNAFKDYGGNDRVLLFCR 264 E +++ KDYGGNDRV+L + Sbjct: 326 EDNNFAILSVVKDYGGNDRVVLAKK 350 Score = 41.2 bits (96), Expect = 0.14, Method: Composition-based stats. Identities = 3/47 (6%), Positives = 18/47 (38%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHE 49 ++ + V L + + + L + ++ + + + ++ + Sbjct: 9 PRLEAEKLVSYVLNLDRIALYIHYERELTEEEKTSIKQFLKQMVEEK 55 >gi|114330835|ref|YP_747057.1| modification methylase, HemK family protein [Nitrosomonas eutropha C91] gi|114307849|gb|ABI59092.1| [protein release factor]-glutamine N5-methyltransferase [Nitrosomonas eutropha C91] Length = 293 Score = 271 bits (695), Expect = 5e-71, Method: Composition-based stats. Identities = 81/256 (31%), Positives = 120/256 (46%), Gaps = 7/256 (2%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L V + + +I + +L Q + R + E + + G R FY++ Sbjct: 35 DARWLLQSVLNVDAAFLITHAELLLGMEQIVHFQQLLARRMAGEPVAYLTGERGFYDLVF 94 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 ++ D PRPETELLV+ AL +I ILDLGTG+GA+ + + + P Sbjct: 95 DVTPDVLIPRPETELLVEMAL----SKIPPDRCCNILDLGTGSGAIAITIARHRPDIYVT 150 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS-VEGLFDVIVSNPPYIESVIVDCLG 184 VD+S AL +A+ NA V E +++DWFS + FDVIV+NPPYI L Sbjct: 151 AVDLSPLALAVARRNAKRCSV-ENVVFIKADWFSGFISEKFDVIVANPPYIVEGDPH-LE 208 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 + F+P I+L +GL R I D +L G +E GY+Q R+ + Sbjct: 209 ADGLRFEPTIALVAQNNGLDCIRRIVDQAPDYLEHSGWLMLEHGYDQADVCRRLLDKTGF 268 Query: 245 FLVNAFKDYGGNDRVL 260 + D G DRV Sbjct: 269 SHIFTRSDLAGIDRVT 284 >gi|313203843|ref|YP_004042500.1| proteiN-(glutamine-n5) methyltransferase, release factor-specific [Paludibacter propionicigenes WB4] gi|312443159|gb|ADQ79515.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Paludibacter propionicigenes WB4] Length = 282 Score = 271 bits (695), Expect = 5e-71, Method: Composition-based stats. Identities = 75/255 (29%), Positives = 118/255 (46%), Gaps = 5/255 (1%) Query: 7 SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66 S+ + ++TG S ++IV+ +++ D Q + I + K+ I ILG +F+ + Sbjct: 25 SYLIIEKLTGFSRTEIIVNKNTLFSDEQHHVIETFIEKLKKNVPIQYILGETEFFGLTFN 84 Query: 67 LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126 ++ PRPETE LV+ + + ILD+GTG+G + ++L E P Sbjct: 85 VNESVLIPRPETEELVEWI----RSENNRSADLNILDIGTGSGCIAISLKHEFPNASVHA 140 Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLE 186 DIS +AL A+SN N + F E +D+IVSNPPY+ + Sbjct: 141 FDISEQALNTARSNVERNKLDVTFSRTNILNAPKTEQRWDIIVSNPPYVTEQEKSSILPN 200 Query: 187 VRDFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245 V + +P ++L D L YR+IA HL G EI + V+ V + Sbjct: 201 VLEHEPHLALFVPDNDPLLFYRSIALFAKHHLKPQGKLYFEINRSFGVETVELLTDLGFC 260 Query: 246 LVNAFKDYGGNDRVL 260 V KD GNDR++ Sbjct: 261 NVELRKDISGNDRMV 275 >gi|302342175|ref|YP_003806704.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Desulfarculus baarsii DSM 2075] gi|301638788|gb|ADK84110.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Desulfarculus baarsii DSM 2075] Length = 291 Score = 271 bits (695), Expect = 5e-71, Method: Composition-based stats. Identities = 88/262 (33%), Positives = 128/262 (48%), Gaps = 8/262 (3%) Query: 7 SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66 + L +V GL + +D D L + ++R HE + I G R+F+ + L Sbjct: 30 AELLLSQVLGLERIGLYLDFDRPLTKDELAGFKALLLRRRAHEPVAYIRGKREFFGLELA 89 Query: 67 LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126 + PRPETELLV+ +A + + + +ILDL TG GAV LAL + P + + Sbjct: 90 VGPGVLIPRPETELLVERGVAL----LAQAERPKILDLCTGGGAVALALASQLPTARVLA 145 Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVIVDCL 183 DIS +AL A+ NA G+ ER LQ + V G FD+I +NPPY+ S CL Sbjct: 146 CDISAQALAYARQNAQALGLEERVSFLQGPLWEPVAATGGFFDLITANPPYVTSGEWPCL 205 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 +VRD +PR++L+ G +GL I G L VEIG Q V+ + ++ Sbjct: 206 PPDVRDHEPRLALEAGPEGLDVIGPIIVGSRAFLRPLAWLLVEIGAGQGPAVMALAQAAG 265 Query: 244 -LFLVNAFKDYGGNDRVLLFCR 264 + +D G DRVL R Sbjct: 266 IFSRIELLRDLAGMDRVLACER 287 >gi|34763569|ref|ZP_00144504.1| METHYLTRANSFERASE [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|27886758|gb|EAA23896.1| METHYLTRANSFERASE [Fusobacterium nucleatum subsp. vincentii ATCC 49256] Length = 370 Score = 271 bits (695), Expect = 5e-71, Method: Composition-based stats. Identities = 81/265 (30%), Positives = 138/265 (52%), Gaps = 8/265 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTN-AIVRSLKHESIHRILGWRDFY 61 L D+ V +S + + + + + + ++R+ K + + ILG +FY Sbjct: 91 PLLDTEYIFSDVLKVSRNTLKYSMSREIKEEDKDKIREMLVLRAKKRKPLQYILGEWEFY 150 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 + +S PR +TE+LV+ + E ILD+G+G+GA+ +A+ E Sbjct: 151 GLPFKVSEGVLIPRADTEILVEQCIQLMREVEEPN----ILDIGSGSGAISIAIANELKS 206 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVI 179 G+DI+ KA+E+A N N + E + ++SD F ++ +D+IVSNPPYI Sbjct: 207 SSVTGIDINEKAIELANENKTLNKI-ENVNFIKSDLFEKIDKDFKYDLIVSNPPYISKNE 265 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 + L EV++++P+ +L DGL YR I+ +L G + EIGYNQ DV +I Sbjct: 266 YETLMPEVKNYEPQNALTDLGDGLYFYREISKLAGEYLKDTGYLAYEIGYNQAKDVTKIL 325 Query: 240 ESRKLFLVNAFKDYGGNDRVLLFCR 264 ++ +++ KDYGGNDRV++ + Sbjct: 326 QNNNFDILSVIKDYGGNDRVVIAKK 350 Score = 40.9 bits (95), Expect = 0.19, Method: Composition-based stats. Identities = 3/45 (6%), Positives = 18/45 (40%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK 47 ++ + V L + + + L + ++ + + + + ++ Sbjct: 9 PRLEAEKLVSYVLNLDRIALYIHYERELSEEEKNSIKHYLKKMVE 53 >gi|118445015|ref|YP_879015.1| methyltransferase [Clostridium novyi NT] gi|118135471|gb|ABK62515.1| Methyltransferase [Clostridium novyi NT] Length = 284 Score = 271 bits (695), Expect = 5e-71, Method: Composition-based stats. Identities = 73/262 (27%), Positives = 120/262 (45%), Gaps = 7/262 (2%) Query: 4 LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63 + D+ L +V +I++ + +L + I + ILG +F + Sbjct: 23 MLDAQLLLQKVLKKDKLFIILNRNEILSKDEEEEFLKLINLRKDKMPVKYILGECEFMGL 82 Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 + PR +TE+LV+ + I++ + RI D+ G+GA+ +++ K Sbjct: 83 NFYVKEGVLIPRADTEILVEEVIK----EIKENNYNRICDVCCGSGAIGVSIGKYMENST 138 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS---SVEGLFDVIVSNPPYIESVIV 180 DIS A+E+ N + +R +SD + FDVIVSNPPYI+ ++ Sbjct: 139 VDCYDISDIAIEVTGKNIERFLLKDRLTVEKSDLLTVAIKQNKKFDVIVSNPPYIKEEVI 198 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 L +V+D++P I+L GGIDGL YR I L +GL + EIGY+Q V + Sbjct: 199 PTLMEDVKDYEPYIALCGGIDGLDFYRKITVQSLEILENNGLLAFEIGYDQAEAVKELLM 258 Query: 241 SRKLFLVNAFKDYGGNDRVLLF 262 V D G +RV++ Sbjct: 259 ESGFTDVKVINDLEGLNRVVIG 280 >gi|320109110|ref|YP_004184700.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Terriglobus saanensis SP1PR4] gi|319927631|gb|ADV84706.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Terriglobus saanensis SP1PR4] Length = 286 Score = 271 bits (695), Expect = 5e-71, Method: Composition-based stats. Identities = 83/263 (31%), Positives = 134/263 (50%), Gaps = 8/263 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A+RDSH L G+S Q++ P+ +L RQ + + L+ I + G ++FY Sbjct: 30 AVRDSHLLLQHALGVSREQIMAWPERMLTPRQSAAFEHLVSERLRAVPIQYLRGQQEFYG 89 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 ++ D PRPETEL++D + I+ +V I D+G+G+GA+ + L E Sbjct: 90 RNFLVTPDVLIPRPETELIIDEVKRY----IDPSALVMIADIGSGSGAIGVTLAAEFEMA 145 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181 + D+S AL + + NA+ + VS+R T +SD FS++ FD +VSNPPYI + D Sbjct: 146 RITAADLSPAALAVTEQNAIRHHVSDRVRTFESDLFSALGERIFDYVVSNPPYIAASERD 205 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 L +VRD +P ++L GG DG Y + +HL G+ +EIG + ++ Sbjct: 206 SLHPQVRDHEPELALYGGEDGFEIYTRLIPQAWKHLRPGGMLFLEIGKP-GQALSANLKA 264 Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264 V KD G R+++ + Sbjct: 265 --WSDVYTVKDLQGLPRLIVARK 285 >gi|66044203|ref|YP_234044.1| modification methylase HemK [Pseudomonas syringae pv. syringae B728a] gi|63254910|gb|AAY36006.1| Modification methylase HemK [Pseudomonas syringae pv. syringae B728a] Length = 277 Score = 271 bits (695), Expect = 6e-71, Method: Composition-based stats. Identities = 79/250 (31%), Positives = 124/250 (49%), Gaps = 7/250 (2%) Query: 16 GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75 G + P+ ++ + R K E + ILG + F+ + L ++ T PR Sbjct: 32 GKPRSFLHTWPERIVSTEAAVAFAGYMERRRKGEPVAYILGQQGFWKLDLEVAPHTLIPR 91 Query: 76 PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135 PETE+LV++AL + ++LDLGTGTGA+ LAL + +K VD +A+ Sbjct: 92 PETEMLVEAALEL----VPAFAPAQVLDLGTGTGAIALALANDRQQWKVTAVDRVPEAVA 147 Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194 +A+ N + + +S WFS ++G FD+I+SNPPYI +VR F+P Sbjct: 148 LAERNRQRLQL-NNAEVFESHWFSGLQGRQFDLIISNPPYISDADPHLSAGDVR-FEPSS 205 Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYG 254 +L G DGL RTI + HLN DG +E GY+Q V + + + +D G Sbjct: 206 ALVAGSDGLDDLRTIIEQAPAHLNADGWLLLEHGYDQGPAVRELLIRQGFERIQTRRDLG 265 Query: 255 GNDRVLLFCR 264 ++R+ C+ Sbjct: 266 EHERITFGCK 275 >gi|302384869|ref|YP_003820691.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Clostridium saccharolyticum WM1] gi|302195497|gb|ADL03068.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Clostridium saccharolyticum WM1] Length = 288 Score = 271 bits (695), Expect = 6e-71, Method: Composition-based stats. Identities = 82/270 (30%), Positives = 126/270 (46%), Gaps = 12/270 (4%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQ-----RFFLTNAIVRSLKHESIHRILG 56 +A DS L ++D + L + + I + +H+I G Sbjct: 23 EASLDSRYLLLEAFHTDMTHFLLDRNKRLPEEDSILESLSVYRSMIGKRSLRIPLHQITG 82 Query: 57 WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116 R+F + ++ PR +TE LV+ L K + +ILDL TG+G + ++L Sbjct: 83 SREFMGLDFEVNEHVLIPRQDTETLVELVLKDY-----KGKMPKILDLCTGSGCIAISLA 137 Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL--FDVIVSNPPY 174 K F + DIS +AL +A+ NA + R ++SD F + + FDVIVSNPPY Sbjct: 138 KLGGFDRVTAADISEEALLVAERNAGKHLGEGRITLVKSDLFEAFKNQRTFDVIVSNPPY 197 Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234 I + I++ L EVRD +P ++LDG DGL YR +A H+ G EIGY+Q Sbjct: 198 IPTKIIEGLQPEVRDHEPMLALDGKEDGLYFYRILALESRSHMVLGGAVYFEIGYDQGEA 257 Query: 235 VVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 V + + + D G DRV+ + Sbjct: 258 VSGLLKDAGFGQIRVVPDAAGLDRVVCARK 287 >gi|114768931|ref|ZP_01446557.1| HemK [alpha proteobacterium HTCC2255] gi|114549848|gb|EAU52729.1| HemK [alpha proteobacterium HTCC2255] Length = 277 Score = 271 bits (694), Expect = 6e-71, Method: Composition-based stats. Identities = 85/259 (32%), Positives = 128/259 (49%), Gaps = 9/259 (3%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 A R++ L L I+ D + D + I + L+ + I +I+G R F+ Sbjct: 22 NAKREAKILLEFTLNLKGK--ILQLDHEISDDIYNYFKTLINKRLEFQPISQIIGERYFW 79 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 + +S + +PRP+TE L++ L + ILDLGTG+G + L+LL E Sbjct: 80 KNKFIVSPNVLDPRPDTETLIEHTL-------SQGKFYNILDLGTGSGCIILSLLDEYKD 132 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181 GVG+D S AL +AK NA +S+R +W ++ FD+I+SNPPYI + Sbjct: 133 AIGVGIDKSEDALNVAKQNANLLSLSQRVSFNLGNWCEGIKEKFDLIISNPPYISENDMK 192 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 L V +++PRI+L DGL YR I DG L +G +EIGY+Q V + ++ Sbjct: 193 ILSKSVLNWEPRIALTPEGDGLGAYRHILDGAKNLLIPNGKLILEIGYDQGKKVTHLLKN 252 Query: 242 RKLFLVNAFKDYGGNDRVL 260 + KD DRVL Sbjct: 253 HGYKDIKLVKDINNKDRVL 271 >gi|262068282|ref|ZP_06027894.1| ribosomal protein L11 methyltransferase [Fusobacterium periodonticum ATCC 33693] gi|291378020|gb|EFE85538.1| ribosomal protein L11 methyltransferase [Fusobacterium periodonticum ATCC 33693] Length = 382 Score = 271 bits (694), Expect = 7e-71, Method: Composition-based stats. Identities = 79/265 (29%), Positives = 138/265 (52%), Gaps = 8/265 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDFY 61 L D+ +S + + + + + + ++ K + + ILG +FY Sbjct: 104 PLVDTEYIFSEALKVSRNTLKYSMSREIKEEDKDKIREMLMLRAKSRKPLQYILGEWEFY 163 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 + + + PRP+TE+LV+ + + + + ILD+G+G+GA+ +A+ E Sbjct: 164 GLPFKVRENVLIPRPDTEILVEQCI----QLMREIEEPNILDIGSGSGAISIAIANELKS 219 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVI 179 GVDI+ +A+++A N + N V E + ++SD F ++ +D+IVSNPPYI Sbjct: 220 SSVTGVDINEEAIKLANENKILNKV-ENINFMKSDLFEKLDEDFKYDLIVSNPPYITKEE 278 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 + L EV++F+P+ +L DGL YR I+ +L + G + EIGY Q DV +I Sbjct: 279 YESLMPEVKNFEPKNALTDLGDGLHFYREISKKAGSYLKESGYLAFEIGYKQAKDVSKIL 338 Query: 240 ESRKLFLVNAFKDYGGNDRVLLFCR 264 E +++ KDYGGN+RV+L + Sbjct: 339 EDNGFAILSVVKDYGGNNRVVLAKK 363 Score = 39.3 bits (91), Expect = 0.50, Method: Composition-based stats. Identities = 4/47 (8%), Positives = 18/47 (38%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHE 49 +S + V L + + + L + ++ + + + ++ + Sbjct: 22 PRLESEKLVSYVLNLDRIALYIHYERELTEEEKSSIKQFLKQMVEEK 68 >gi|268595711|ref|ZP_06129878.1| conserved hypothetical protein [Neisseria gonorrhoeae 35/02] gi|268549100|gb|EEZ44518.1| conserved hypothetical protein [Neisseria gonorrhoeae 35/02] gi|317165196|gb|ADV08737.1| HemK [Neisseria gonorrhoeae TCDC-NG08107] Length = 295 Score = 271 bits (694), Expect = 7e-71, Method: Composition-based stats. Identities = 87/260 (33%), Positives = 122/260 (46%), Gaps = 12/260 (4%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 ++ L V+ + Q++ + D R R L E + ILG R+FY R Sbjct: 38 EARMLLQYVSEYTRVQLLTRGGEEMPDEIRQRADRLAQRRLNGEPVAYILGVREFYGRRF 97 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 T++ + PRPETE LV++ LA + R+ DLGTG+GAV + + E P Sbjct: 98 TVNPNVLIPRPETEHLVEAVLARL------PENGRVWDLGTGSGAVAVTVALERPDAFVR 151 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS---SVEGLFDVIVSNPPYIESVIVDC 182 DIS ALE A+ NA G R + WF E +D+IVSNPPYIE+ Sbjct: 152 ASDISTPALETARKNAADLGA--RVEFAHGSWFDTDMPSERQWDIIVSNPPYIENGDKHL 209 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 ++R F+P+I+L DGLS RT+A G L + G +E G++Q V + Sbjct: 210 SQGDLR-FEPQIALTDFSDGLSCIRTLAQGAPDRLAEGGFLLLEHGFDQGAAVRGVLAEN 268 Query: 243 KLFLVNAFKDYGGNDRVLLF 262 V D G DRV L Sbjct: 269 GFSGVEILPDLVGLDRVTLG 288 >gi|15966363|ref|NP_386716.1| putative methyltransferase protein [Sinorhizobium meliloti 1021] gi|307313050|ref|ZP_07592677.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Sinorhizobium meliloti BL225C] gi|307321057|ref|ZP_07600463.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Sinorhizobium meliloti AK83] gi|15075634|emb|CAC47189.1| Putative methyltransferase [Sinorhizobium meliloti 1021] gi|306893332|gb|EFN24112.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Sinorhizobium meliloti AK83] gi|306899369|gb|EFN30003.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Sinorhizobium meliloti BL225C] Length = 293 Score = 271 bits (694), Expect = 7e-71, Method: Composition-based stats. Identities = 116/261 (44%), Positives = 161/261 (61%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A D+ + + L+ ++ + D + A+ R HE ++RILG R+F+ Sbjct: 24 AGLDARHLISGLLDLALAALLTRGREPISDEDAARIRAAVERRAAHEPVYRILGEREFFG 83 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 ++L LS +T EPRP+TE+LVD + + + RI+DLGTGTGA+CLALL Sbjct: 84 LKLKLSKETLEPRPDTEILVDCLIPHARRIASSKGSCRIVDLGTGTGAICLALLAAVLDA 143 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182 +G+G DIS AL A NA NG++ERF T++S WF +V+G FD+IVSNPPYI S ++ Sbjct: 144 RGLGTDISEDALATALENARRNGLAERFGTVRSKWFEAVDGRFDIIVSNPPYIRSNVIPE 203 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 L EVR DP +LDGG DGL YR IA RHL DG+ +EIG++QK V +FE++ Sbjct: 204 LEPEVRYHDPVAALDGGEDGLDAYRAIASHAGRHLETDGVIGLEIGFDQKRAVTALFEAQ 263 Query: 243 KLFLVNAFKDYGGNDRVLLFC 263 L++A KD GGNDRVL+F Sbjct: 264 GFRLLSAAKDLGGNDRVLVFQ 284 >gi|226315062|ref|YP_002774958.1| hypothetical protein BBR47_54770 [Brevibacillus brevis NBRC 100599] gi|226098012|dbj|BAH46454.1| conserved hypothetical protein [Brevibacillus brevis NBRC 100599] Length = 296 Score = 271 bits (694), Expect = 7e-71, Method: Composition-based stats. Identities = 81/267 (30%), Positives = 130/267 (48%), Gaps = 6/267 (2%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 L ++ + + ++ +D L VR +E + + G ++FY Sbjct: 31 DPLFEAELMIRHCLDWDRTRFLMAMPDSIDAETLVKLDGLCVRRANNEPLQYMFGEQEFY 90 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 T+ PRPETE+LV+ +A + + + + ++D+GTG+GA+C+ L E P Sbjct: 91 GRPFTVRPGVLIPRPETEILVEQVMAAATMLWPESEELAVVDIGTGSGAICITLALEKPQ 150 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESV 178 ++ VD+S +A IA+ NA G RF LQ D + DV+VSNPPYI S Sbjct: 151 WRVTTVDLSLEATAIARENASRLGADVRF--LQGDLVQPLLEAGEKVDVLVSNPPYIPSR 208 Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238 V+ L EVR +PR++LDGG DGL YR + + + L + + E+G Q DV + Sbjct: 209 DVEELDDEVRVHEPRLALDGGEDGLDCYRRLCEALPNLLKDRAVVAFEVGIYQARDVAAL 268 Query: 239 FESRK-LFLVNAFKDYGGNDRVLLFCR 264 + + V D G +RV++ R Sbjct: 269 MRASGVMDEVEIVPDLAGIERVVIGVR 295 >gi|160876840|ref|YP_001556156.1| HemK family modification methylase [Shewanella baltica OS195] gi|217974699|ref|YP_002359450.1| HemK family modification methylase [Shewanella baltica OS223] gi|304410656|ref|ZP_07392274.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Shewanella baltica OS183] gi|307304753|ref|ZP_07584503.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Shewanella baltica BA175] gi|160862362|gb|ABX50896.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Shewanella baltica OS195] gi|217499834|gb|ACK48027.1| modification methylase, HemK family [Shewanella baltica OS223] gi|304351140|gb|EFM15540.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Shewanella baltica OS183] gi|306912155|gb|EFN42579.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Shewanella baltica BA175] gi|315269043|gb|ADT95896.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Shewanella baltica OS678] Length = 282 Score = 271 bits (694), Expect = 7e-71, Method: Composition-based stats. Identities = 80/261 (30%), Positives = 126/261 (48%), Gaps = 8/261 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A D+ L S + P+ L Q + + K + I+G R+F++ Sbjct: 25 AHLDAEVLLLYCLNKSRSYLYTWPEKSLTVEQWKRFQQMVQKRQKGVPVAHIVGEREFWS 84 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + ++ T PRP+TE+LV++AL L ++LDLGTGTGA+ LAL E + Sbjct: 85 LPFIVNDTTLIPRPDTEILVETALNMPLSTY-----AKVLDLGTGTGAIALALASERESW 139 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181 + VD A+ +A +N + + D LQSDWFS+V+ FD+IVSNPPYI+ Sbjct: 140 QITAVDKVDDAVALAIANRENLKLP-QVDILQSDWFSAVKSRDFDLIVSNPPYIDETDEH 198 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P+ +L +G + IA+ +L +G +E G+ Q V + Sbjct: 199 LHQGDVR-FEPQSALTAAEEGFADLYYIANTARDYLKPNGYILLEHGFEQAVRLRAKLIE 257 Query: 242 RKLFLVNAFKDYGGNDRVLLF 262 V +D+G NDR + Sbjct: 258 LGYENVATVRDFGSNDRCTMG 278 >gi|126665162|ref|ZP_01736145.1| Modification methylase HemK [Marinobacter sp. ELB17] gi|126630532|gb|EBA01147.1| Modification methylase HemK [Marinobacter sp. ELB17] Length = 314 Score = 271 bits (694), Expect = 7e-71, Method: Composition-based stats. Identities = 87/286 (30%), Positives = 131/286 (45%), Gaps = 33/286 (11%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 D+ L +VTG S + P+ + Q + + E + +LGW++F++ Sbjct: 35 PQLDAELLLVQVTGWSRTRFRAFPEQHVSLVQAAAFEQLVDKRAAGEPVAYVLGWQEFWS 94 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +S+ T PRP+TE +V+ AL LP R+LDLGTGTGA+ LAL E P + Sbjct: 95 LPLQVSAATLIPRPDTECVVEQALTLDLPA-----QARVLDLGTGTGAIALALASERPDW 149 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--------------------- 161 D A+ +A+SNA + + ++S WF + Sbjct: 150 DITASDFVDAAVALAQSNAAALNLPIQV--VKSHWFDQLTAVCFDQRLDESGDPRRDLRG 207 Query: 162 ----EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217 + FD+IVSNPPYI + +VR F+P +L G DGL R I L Sbjct: 208 DLNRDQGFDLIVSNPPYIANTDHHLSEGDVR-FEPASALVSGADGLDDIRHIVAAAPSWL 266 Query: 218 NKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFC 263 N G +E GY+Q V + + V++ +DYG NDR+ L Sbjct: 267 NAGGWLLLEHGYDQAQAVQGLLHQQGFDQVHSRQDYGRNDRMTLGQ 312 >gi|330975578|gb|EGH75644.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 277 Score = 271 bits (694), Expect = 7e-71, Method: Composition-based stats. Identities = 79/250 (31%), Positives = 123/250 (49%), Gaps = 7/250 (2%) Query: 16 GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75 G + P+ ++ + R K E + ILG + F+ + L ++ T PR Sbjct: 32 GKPRSFLHTWPERIVSTEAAVAFAGYMERRRKGEPVAYILGQQGFWKLDLEVAPHTLIPR 91 Query: 76 PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135 PETE+LV++AL + ++LDLGTGTGA+ LAL E +K VD +A+ Sbjct: 92 PETEMLVEAALEL----VPAFAPAQVLDLGTGTGAIALALANERQQWKVTAVDRVPEAVA 147 Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194 +A+ N + + +S WF ++G FD+I+SNPPYI +VR F+P Sbjct: 148 LAERNRQRLQL-NNAEVFESHWFGGLQGRQFDLIISNPPYISDADPHLSAGDVR-FEPSS 205 Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYG 254 +L G DGL RTI + HLN DG +E GY+Q V + + + +D G Sbjct: 206 ALVAGSDGLDDLRTIIEQAPAHLNADGWLLLEHGYDQGPAVRELLIRQGFERIQTRRDLG 265 Query: 255 GNDRVLLFCR 264 ++R+ C+ Sbjct: 266 EHERITFGCK 275 >gi|330828703|ref|YP_004391655.1| protein-(glutamine-N5) methyltransferase [Aeromonas veronii B565] gi|328803839|gb|AEB49038.1| Protein-(Glutamine-N5) methyltransferase, release factor-specific [Aeromonas veronii B565] Length = 283 Score = 271 bits (694), Expect = 7e-71, Method: Composition-based stats. Identities = 87/267 (32%), Positives = 125/267 (46%), Gaps = 15/267 (5%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 D+ LC + G ++ P+ LD Q+ L + R L E I ++G R+F++ Sbjct: 20 PRADADVLLCHLLGCRRSYLMTWPEHELDAAQQATLQGWLARRLNGEPIAHLVGEREFWS 79 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +S T PRP+TE+LV+ AL + +LDLGTGTGA+ LAL E P Sbjct: 80 LPLKVSPATLIPRPDTEVLVEQALTRI-----PQGPCAVLDLGTGTGAIALALKSERPEI 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-------LFDVIVSNPPYI 175 VD A +A+ N+V G+ + WF + F VIVSNPPYI Sbjct: 135 DVWAVDRMADAAALARENSVALGLP--IEVRDGSWFEPLGEPDRDETPRFAVIVSNPPYI 192 Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235 + +VR F+PR +L GL+ R I +L DG +E G++Q V Sbjct: 193 DGADPHLEQGDVR-FEPRSALVADDAGLADIRHIVAHAPAYLLADGWLLLEHGWDQGEAV 251 Query: 236 VRIFESRKLFLVNAFKDYGGNDRVLLF 262 ++ V +DYG NDRV L Sbjct: 252 RQLLRDGGYREVATVRDYGDNDRVTLG 278 >gi|306844841|ref|ZP_07477424.1| glutamine-N5 methyltransferase, release factor-specific [Brucella sp. BO1] gi|306274773|gb|EFM56554.1| glutamine-N5 methyltransferase, release factor-specific [Brucella sp. BO1] Length = 295 Score = 271 bits (694), Expect = 8e-71, Method: Composition-based stats. Identities = 106/258 (41%), Positives = 150/258 (58%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 D+ + TG + ++ P+ ++ + L A+ R E +HRI+G R+FY + Sbjct: 30 LDARLLIEWATGATCLDLVSQPEKLIGSAEAEKLRAALERRAGGEPVHRIMGQREFYGLP 89 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 LS+ T EPRP+TE LV+ + I + +LD+GTGTGA+ ++LL G Sbjct: 90 FRLSAQTLEPRPDTEALVELVIPVLEQIIARHGTAEVLDMGTGTGAIIISLLHRFEHMHG 149 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184 +GVD++ AL A+ NA+ NGV ERF L+SDWFS+V G F +IVSNPPYI + L Sbjct: 150 IGVDVAEGALATARINAIDNGVGERFAGLKSDWFSNVSGKFHLIVSNPPYIPHAEIAGLS 209 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 EVR+ DP +LDGG DGL Y+ +A GV +L KDG+ +VEIG Q DV +F+S Sbjct: 210 REVREHDPLAALDGGPDGLDFYKALAQGVGAYLYKDGMVAVEIGAGQFQDVEALFKSTGF 269 Query: 245 FLVNAFKDYGGNDRVLLF 262 L D GG+ R +LF Sbjct: 270 SLAGEANDLGGHRRAMLF 287 >gi|312958851|ref|ZP_07773370.1| modification methylase [Pseudomonas fluorescens WH6] gi|311286621|gb|EFQ65183.1| modification methylase [Pseudomonas fluorescens WH6] Length = 276 Score = 271 bits (693), Expect = 8e-71, Method: Composition-based stats. Identities = 82/250 (32%), Positives = 126/250 (50%), Gaps = 8/250 (3%) Query: 16 GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75 G S + P+ ++ + R E + ILG + F+ + L ++ T PR Sbjct: 32 GKSRSYLHTWPEKIVSSEDALTFAGYLQRRRAGEPVAYILGQQGFWKLDLEVAPHTLIPR 91 Query: 76 PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135 P+TELLVD+AL + R+LDLGTG+GA+ LAL E P + VD +A+ Sbjct: 92 PDTELLVDAALE-----LLPATPTRVLDLGTGSGAIALALASERPAWHVTAVDRVLEAVA 146 Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194 +A+ N + L S WFS+++G +D+I+SNPPYI + +VR F+P Sbjct: 147 LAERNRQRLHL-HNAMVLNSHWFSALQGHRYDLIISNPPYIAENDPHLVAGDVR-FEPAS 204 Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYG 254 +L G DGL R I + HLN G +E GY+Q V + ++ V++ D G Sbjct: 205 ALVAGRDGLDDLRLIINEAPAHLNAGGWLLLEHGYDQAEAVRDLLLTQGFEDVHSRIDLG 264 Query: 255 GNDRVLLFCR 264 G++R+ L R Sbjct: 265 GHERITLGRR 274 >gi|303230838|ref|ZP_07317585.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Veillonella atypica ACS-049-V-Sch6] gi|302514598|gb|EFL56593.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Veillonella atypica ACS-049-V-Sch6] Length = 289 Score = 271 bits (693), Expect = 8e-71, Method: Composition-based stats. Identities = 86/265 (32%), Positives = 130/265 (49%), Gaps = 9/265 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 D L V G + + + D L+ + ++ K S+ + G +DF Sbjct: 27 PRLDGEVLLSHVLGKNRIYLYTNYDQPLEQEELDRFRPLVIERAKGHSVASLTGTKDFMG 86 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + ++ PRP+TE LV+ L ++D +RILD+ TG G + L+LL P Sbjct: 87 LTFAVNDKVLIPRPDTETLVEYVL----SSYHQQDSIRILDMCTGPGTILLSLLHYLPTA 142 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG---LFDVIVSNPPYIESVI 179 G+G+DIS ALEIA N + R + +SD FS +E LFDVIVSNPPYI Sbjct: 143 TGMGLDISRDALEIATKNQEAFKLENRSEFHESDMFSYLEHHNELFDVIVSNPPYIRLED 202 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 + L +V + +P I+L GG DGL YR +A ++L GL + E+GY+Q DV + Sbjct: 203 KEILSPDVLN-EPHIALFGGEDGLDFYRHLAMECVKYLKPYGLVAFEVGYDQAEDVKSLL 261 Query: 240 ESRK-LFLVNAFKDYGGNDRVLLFC 263 E+ ++ D +RV+ Sbjct: 262 EAVGSYVDISFAADLASINRVVKAR 286 >gi|330972815|gb|EGH72881.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Pseudomonas syringae pv. aceris str. M302273PT] Length = 277 Score = 271 bits (693), Expect = 8e-71, Method: Composition-based stats. Identities = 79/250 (31%), Positives = 124/250 (49%), Gaps = 7/250 (2%) Query: 16 GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75 G + P+ ++ + R K E + ILG + F+ + L ++ T PR Sbjct: 32 GKPRSFLHTWPERIVSTEAAVAFAGYMERRRKGEPVAYILGQQGFWKLDLEVAPHTLIPR 91 Query: 76 PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135 PETE+LV++AL + ++LDLGTGTGA+ LAL + +K VD +A+ Sbjct: 92 PETEMLVEAALEL----VPAFAPAQVLDLGTGTGAIALALANDRQQWKVTAVDRVPEAVA 147 Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194 +A+ N + + +S WFS ++G FD+I+SNPPYI +VR F+P Sbjct: 148 LAERNRQRLQL-NNAEVFESHWFSGLQGRQFDLIISNPPYISDADPHLSAGDVR-FEPSS 205 Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYG 254 +L G DGL RTI + HLN DG +E GY+Q V + + + +D G Sbjct: 206 ALVAGSDGLDDLRTIIEQAPAHLNADGWLLLEHGYDQGPAVRELLIRQGFERIQTRRDLG 265 Query: 255 GNDRVLLFCR 264 ++R+ C+ Sbjct: 266 EHERITFGCK 275 >gi|150015293|ref|YP_001307547.1| HemK family modification methylase [Clostridium beijerinckii NCIMB 8052] gi|149901758|gb|ABR32591.1| modification methylase, HemK family [Clostridium beijerinckii NCIMB 8052] Length = 586 Score = 271 bits (693), Expect = 9e-71, Method: Composition-based stats. Identities = 72/265 (27%), Positives = 120/265 (45%), Gaps = 7/265 (2%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A D+ L + +I + + + I + + IL +F Sbjct: 325 ARLDAELLLGNIIEKDRVYLITHKEDEVSKEDAEKYFDLIEKRRNKMPVKYILNKCEFMG 384 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + + PR +TE+LVD L IE+ ++I DL +G+GAV ++L Sbjct: 385 IEFYVEEGVLIPRGDTEILVDEVLKI----IEENQEMQICDLCSGSGAVGISLAHFRQNI 440 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS---VEGLFDVIVSNPPYIESVI 179 K +D +++ N N + +R ++SD ++D+IVSNPPYIE Sbjct: 441 KVDLIDYYPIPEKVSLINIEKNKLEDRVFFIKSDLLEESIKNNKIYDIIVSNPPYIEECE 500 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 + L +V++++P +L+GG DGL YR I D L + G+ + EIGYNQ V + Sbjct: 501 IGKLMEDVKNYEPHTALNGGNDGLDFYRKIIDQSQYTLRESGILAFEIGYNQGEAVKLLM 560 Query: 240 ESRKLFLVNAFKDYGGNDRVLLFCR 264 E+ V KD+ DRV++ + Sbjct: 561 ENNGFTNVKIVKDFASLDRVVVGIK 585 >gi|89900073|ref|YP_522544.1| HemK family modification methylase [Rhodoferax ferrireducens T118] gi|89344810|gb|ABD69013.1| modification methylase, HemK family [Rhodoferax ferrireducens T118] Length = 280 Score = 271 bits (693), Expect = 9e-71, Method: Composition-based stats. Identities = 77/262 (29%), Positives = 116/262 (44%), Gaps = 13/262 (4%) Query: 4 LRDSHSFLCRVTGLS---SHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60 D+ L G S ++ L + L + R E + I G ++F Sbjct: 18 RLDAQLLLLHALGKSAQERAWLLAHDTDELPPSAQATLDAWVQRRAASEPLAYITGHQEF 77 Query: 61 YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120 + + L + + PRP+TE LV+ AL + +LDLGTG+GA+ LAL P Sbjct: 78 FGLDLAVDARVLVPRPDTETLVEWALDVL--QAPTGTAPAVLDLGTGSGAIALALKATRP 135 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIES 177 + VD S AL +A++NA G++ +F Q W + + + FD IVSNPPY+ + Sbjct: 136 ELRVSAVDYSADALAVARANAQRLGLAVQFS--QGAWLAGLAQPDARFDAIVSNPPYVAA 193 Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237 + F+P +L G DGL R I HLN G +E GY+Q V Sbjct: 194 QDKHL---DALTFEPLQALASGADGLDDIRQIITQAPAHLNPGGWLLLEHGYDQAAAVRA 250 Query: 238 IFESRKLFLVNAFKDYGGNDRV 259 + L V + +D G +R Sbjct: 251 LLLDAGLHDVQSRRDLSGIERC 272 >gi|293609439|ref|ZP_06691741.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292827891|gb|EFF86254.1| conserved hypothetical protein [Acinetobacter sp. SH024] Length = 271 Score = 271 bits (693), Expect = 9e-71, Method: Composition-based stats. Identities = 82/256 (32%), Positives = 123/256 (48%), Gaps = 10/256 (3%) Query: 9 SFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLS 68 L ++S ++ + L +Q + R E + + G + F+ + L ++ Sbjct: 23 WLLEHFLKINSLELKFRLEQELTAQQEQDYLAGLERIQNGEPLAYVTGSQPFWTLDLKVT 82 Query: 69 SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128 SDT PRP+TE+LV++ L +LP + I+DLGTGTGA+ LAL E P ++ +D Sbjct: 83 SDTLVPRPDTEVLVETVLNLNLP-----NTANIVDLGTGTGAIALALASERPDWQVTAID 137 Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEV 187 I LE+AK NA + + R WF ++E FD+IVSNPPYI+ + Sbjct: 138 IYAPTLEVAKENAQAHDLQ-RVKFACGAWFDALEPQKFDLIVSNPPYIDPEDEHM---QA 193 Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLV 247 +PR +L GL+ I L G ++E GY+Q V IF + Sbjct: 194 LATEPRRALVADHQGLADIEIIIAQGKNWLKPQGWIALEHGYDQGQAVRDIFTEHGFSEI 253 Query: 248 NAFKDYGGNDRVLLFC 263 +DYG NDRV L C Sbjct: 254 KTIQDYGQNDRVTLAC 269 >gi|157962942|ref|YP_001502976.1| HemK family modification methylase [Shewanella pealeana ATCC 700345] gi|157847942|gb|ABV88441.1| modification methylase, HemK family [Shewanella pealeana ATCC 700345] Length = 280 Score = 271 bits (693), Expect = 9e-71, Method: Composition-based stats. Identities = 83/262 (31%), Positives = 128/262 (48%), Gaps = 8/262 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A D+ L V + PD L+ Q F + + L+ I I+G R+F++ Sbjct: 23 ASLDAEVMLLHVINKQRSYLYTWPDRSLEPEQVFEFKQMLAKRLRGNPIAHIVGEREFWS 82 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + ++ T PRP+TE+LV++AL + + ++LDLGTGTGA+ L+L E + Sbjct: 83 LPFRVNPTTLIPRPDTEILVETAL-----NLPLAESAKVLDLGTGTGAIALSLAHERSEW 137 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181 + +D A+ +AK N TN E+ D QSDWF +VE F++IVSNPPYI+ Sbjct: 138 QVCAIDKVDDAVALAKEN-RTNLKLEQVDVFQSDWFDAVECYDFNLIVSNPPYIDEEDEH 196 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P +L G + IA+ +L G +E GY Q +++ Sbjct: 197 LSQGDVR-FEPASALTAPQRGFADLFYIAESARDYLAPGGYLLLEHGYQQAIELREKLIE 255 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 V +D+G NDR L Sbjct: 256 LGYENVATVRDFGSNDRCTLGR 277 >gi|330899754|gb|EGH31173.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Pseudomonas syringae pv. japonica str. M301072PT] Length = 277 Score = 271 bits (693), Expect = 9e-71, Method: Composition-based stats. Identities = 79/250 (31%), Positives = 123/250 (49%), Gaps = 7/250 (2%) Query: 16 GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75 G + P+ ++ + R K E + ILG + F+ + L ++ T PR Sbjct: 32 GKPRSFLHTWPERIVSTEAAVAFAGYMERRRKGEPVAYILGQQGFWKLDLEVAPHTLIPR 91 Query: 76 PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135 PETE+LV++AL + ++LDLGTGTGA+ LAL E +K VD +A+ Sbjct: 92 PETEMLVEAALEL----VPAFASAQVLDLGTGTGAIALALANERQQWKVTAVDRVPEAVA 147 Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194 +A+ N + + +S WF ++G FD+I+SNPPYI +VR F+P Sbjct: 148 LAERNRQRLQL-NNAEVFESHWFGGLQGRQFDLIISNPPYISDADPHLSAGDVR-FEPSS 205 Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYG 254 +L G DGL RTI + HLN DG +E GY+Q V + + + +D G Sbjct: 206 ALVAGSDGLDDLRTIIEQAPAHLNADGWLLLEHGYDQGPAVRELLIRQGFERIQTRRDLG 265 Query: 255 GNDRVLLFCR 264 ++R+ C+ Sbjct: 266 EHERITFGCK 275 >gi|329929004|ref|ZP_08282806.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Paenibacillus sp. HGF5] gi|328936993|gb|EGG33422.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Paenibacillus sp. HGF5] Length = 296 Score = 271 bits (693), Expect = 9e-71, Method: Composition-based stats. Identities = 84/265 (31%), Positives = 130/265 (49%), Gaps = 5/265 (1%) Query: 1 MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60 M+ R++ L V GLS + + +R L AI R + I+G ++F Sbjct: 31 MEPQRNAQLLLEHVLGLSGTSYYMALTDPFPEGRRLALEEAITRKAEGVPAQYIIGEQEF 90 Query: 61 YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD-VVRILDLGTGTGAVCLALLKES 119 Y ++ PRPETELLV++ L + + D ++++D+GTG+GA+ + L +S Sbjct: 91 YGRPFDVTPAVLIPRPETELLVEAVLKYGQELTPRPDGGLKVVDIGTGSGAIAITLALQS 150 Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESV 178 + DIS ALE+A NA G R + Q + G+ D++VSNPPYI + Sbjct: 151 KGWDVFASDISSDALEVAARNAKKLGA--RVEFRQGNLLEPFAGMGPDILVSNPPYIPAE 208 Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238 ++ L EVRD++PR +LDGG DGL+ YR + +S L + E+G Q DV + Sbjct: 209 DIEELQPEVRDYEPRTALDGGPDGLNPYRIMMAQLSLLSAPPRLIAFELGMGQAGDVAEL 268 Query: 239 FESRK-LFLVNAFKDYGGNDRVLLF 262 + D G DR +L Sbjct: 269 LRKAGHWEEIVTVPDLAGIDRHVLG 293 >gi|90407673|ref|ZP_01215853.1| Methylase of polypeptide chain release factor [Psychromonas sp. CNPT3] gi|90311264|gb|EAS39369.1| Methylase of polypeptide chain release factor [Psychromonas sp. CNPT3] Length = 277 Score = 271 bits (693), Expect = 9e-71, Method: Composition-based stats. Identities = 83/260 (31%), Positives = 125/260 (48%), Gaps = 8/260 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 AL D+ LC V S ++ P+ +L D Q+ I +K + + G R+F++ Sbjct: 20 ALLDAQVLLCFVLQKESVYLMTWPERLLTDMQKEAYKALIDERIKGVPVAYLTGTREFWS 79 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + +++ T PR +TE LV+ AL P ILDLGTGTGA+ LAL E P Sbjct: 80 LPFKVNASTLIPRADTETLVEYALQVCSPN------SHILDLGTGTGAIILALASELPHA 133 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182 + VD + A+++A N + + + QSDWFS V G FD+IVSNPPYI+ Sbjct: 134 QCSAVDFNADAVQLAIENRQALKL-DNVNIYQSDWFSQVHGRFDLIVSNPPYIDKEDHHL 192 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 +VR F+P +L GL+ I +L +G +E G+ Q V IF Sbjct: 193 AEGDVR-FEPLSALVADDKGLADIHLIVSQARLYLKTNGTLMIEHGFEQGEAVRNIFRLF 251 Query: 243 KLFLVNAFKDYGGNDRVLLF 262 + + D N+R+ + Sbjct: 252 EFDEIRTECDLARNERISIA 271 >gi|83591212|ref|YP_431221.1| HemK family modification methylase [Moorella thermoacetica ATCC 39073] gi|83574126|gb|ABC20678.1| [protein release factor]-glutamine N5-methyltransferase [Moorella thermoacetica ATCC 39073] Length = 283 Score = 270 bits (692), Expect = 1e-70, Method: Composition-based stats. Identities = 76/265 (28%), Positives = 126/265 (47%), Gaps = 7/265 (2%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 + ++ L L+ +++ + L AI R + + G ++F Sbjct: 21 RPRLEAEVLLGWACSLTRPRLLARLEEELAPAAAGRFWQAIDRRAAGYPLQYLTGHQEFM 80 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 ++ ++ PR +TE++V++ L R++ + I D GTG+GA+ L+L P Sbjct: 81 SLDFKVTPAVLIPRQDTEVVVEAVLE----RLDPCESYTIADCGTGSGAIALSLAHYLPR 136 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIV 180 + DIS AL +A+ NA G++ R LQ D+ + + G D +V+NPPYI + + Sbjct: 137 ARVYATDISPAALTVAQENARKLGLAARVTLLQGDFLAPLRGLKLDALVANPPYIPTAAL 196 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 L +VR +PR++LDGG DGL YR + G + L GL ++EIG +Q V + Sbjct: 197 PGLPADVRS-EPRLALDGGPDGLDAYRFLLPGAAGLLRPGGLLALEIGSDQGQAVKDLAR 255 Query: 241 SRK-LFLVNAFKDYGGNDRVLLFCR 264 + DY G DR L R Sbjct: 256 AVGAYRNEQVLPDYAGRDRCFLAYR 280 >gi|168185913|ref|ZP_02620548.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Clostridium botulinum C str. Eklund] gi|169296020|gb|EDS78153.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Clostridium botulinum C str. Eklund] Length = 292 Score = 270 bits (692), Expect = 1e-70, Method: Composition-based stats. Identities = 69/262 (26%), Positives = 119/262 (45%), Gaps = 7/262 (2%) Query: 4 LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63 + D+ L +V +I++ + + + I + ILG +F + Sbjct: 23 MLDAQLLLQKVLKKDKLFIILNRSETISNNDKEEFIKLINLRKDKMPVKYILGECEFMGL 82 Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 T+ PR +TE+LV+ + I+ +I D+ G+GA+ +++ K Sbjct: 83 NFTIKEGVLIPRADTEILVEEVIK----EIKNNGYTKICDVCCGSGAIGVSIGKYIENSI 138 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS---SVEGLFDVIVSNPPYIESVIV 180 DIS A+E+ N + +R +SD + F++IVSNPPYI+ ++ Sbjct: 139 VDCYDISDIAIEVTNKNINRFLLEDRVKVRKSDLLTVAKEENKKFNIIVSNPPYIKEKVI 198 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 L +V+ F+P I+L GG DGL Y+ I + + L +DGL + EIGY+Q +V + Sbjct: 199 PTLMDDVKKFEPYIALCGGADGLDFYKKIINQSLQLLEEDGLLAFEIGYDQGEEVKELLI 258 Query: 241 SRKLFLVNAFKDYGGNDRVLLF 262 V D G +RV + Sbjct: 259 KNGFSCVRVINDLAGLNRVAIG 280 >gi|113971502|ref|YP_735295.1| HemK family modification methylase [Shewanella sp. MR-4] gi|113886186|gb|ABI40238.1| modification methylase, HemK family [Shewanella sp. MR-4] Length = 286 Score = 270 bits (692), Expect = 1e-70, Method: Composition-based stats. Identities = 82/261 (31%), Positives = 129/261 (49%), Gaps = 8/261 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A D+ FL S + P+ L Q + R + + I+G R+F++ Sbjct: 25 AHLDAEVFLLYCLNKSRAFLYTWPEKALTVEQWKRFQQMVQRRQQGVPVAHIVGEREFWS 84 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + ++ T PRP+TE+LV++AL + ++LDLGTGTGA+ LAL E + Sbjct: 85 LPFIVNDTTLIPRPDTEILVETAL-----NLPLESNAKVLDLGTGTGAIALALASERATW 139 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181 + VD A+ +AK+N TN E+ + LQSDWFS+++ FD+IVSNPPYI+ Sbjct: 140 QITAVDKVEDAVALAKAN-RTNLKLEQVEILQSDWFSAIKAHDFDLIVSNPPYIDEADEH 198 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P+ +L +G + IA +L +G +E G+ Q V + Sbjct: 199 LHQGDVR-FEPQSALTAADEGFADLYYIAKTARDYLKPNGYILLEHGFEQAVKLREKLTE 257 Query: 242 RKLFLVNAFKDYGGNDRVLLF 262 V +D+G NDR + Sbjct: 258 LGYQNVATVRDFGSNDRCTMG 278 >gi|196229475|ref|ZP_03128340.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Chthoniobacter flavus Ellin428] gi|196226707|gb|EDY21212.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Chthoniobacter flavus Ellin428] Length = 275 Score = 270 bits (692), Expect = 1e-70, Method: Composition-based stats. Identities = 78/256 (30%), Positives = 118/256 (46%), Gaps = 10/256 (3%) Query: 8 HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67 L V G ++ ++ D L + + L + R E + +LG +F+ Sbjct: 28 EHLLAHVLGKKRMELYLEFDRPLSEPELEPLRALVKRRAAGEPLQHLLGTAEFHGRSFLC 87 Query: 68 SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 PRPETE L + LA R+LD+GTG+G + L L P + V Sbjct: 88 DKRGLVPRPETEQLCELVLA-------GGAAKRVLDIGTGSGVIALTLATAWPEAQVEAV 140 Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEV 187 D+S AL +A+ NA ++ R L SD +SV G +D+IV+N PYI + L EV Sbjct: 141 DLSPDALALARENAARLELAGRVQFLASDLLASVTGEYDLIVANLPYIARDEIATLTREV 200 Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLV 247 R DP +LDGG DGL +R ++HL G ++EIG++Q + + + + Sbjct: 201 R-HDPLSALDGGPDGLEVFRRFIPQAAQHLR--GRLALEIGHDQADPLTELLAAHNFQDI 257 Query: 248 NAFKDYGGNDRVLLFC 263 DY G DR + Sbjct: 258 RPQTDYQGKDRFIFAT 273 >gi|289678405|ref|ZP_06499295.1| modification methylase HemK [Pseudomonas syringae pv. syringae FF5] Length = 277 Score = 270 bits (692), Expect = 1e-70, Method: Composition-based stats. Identities = 79/250 (31%), Positives = 123/250 (49%), Gaps = 7/250 (2%) Query: 16 GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75 G + P+ ++ + R K E + ILG + F+ + L ++ T PR Sbjct: 32 GKPRSFLHTWPERIVSTEAAVAFAGYMERRRKGEPVAYILGQQGFWKLDLEVAPHTLIPR 91 Query: 76 PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135 PETE+LV++AL + ++LDLGTGTGA+ LAL E +K VD +A+ Sbjct: 92 PETEMLVEAALEL----VPAFAPAQVLDLGTGTGAIALALANERQQWKVTAVDRVPEAVA 147 Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194 +A+ N + + +S WF ++G FD+I+SNPPYI +VR F+P Sbjct: 148 LAERNRQRLQL-NNAEVFESHWFGGLQGRQFDLIISNPPYISDADPHLSAGDVR-FEPSS 205 Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYG 254 +L G DGL RTI + HLN DG +E GY+Q V + + + +D G Sbjct: 206 ALVAGSDGLDDLRTIIEQAPAHLNADGWLLLEHGYDQGAAVRELLIRQGFERIQTRRDLG 265 Query: 255 GNDRVLLFCR 264 ++R+ C+ Sbjct: 266 EHERITFGCK 275 >gi|254246466|ref|ZP_04939787.1| Methylase [Burkholderia cenocepacia PC184] gi|124871242|gb|EAY62958.1| Methylase [Burkholderia cenocepacia PC184] Length = 280 Score = 270 bits (692), Expect = 1e-70, Method: Composition-based stats. Identities = 86/261 (32%), Positives = 127/261 (48%), Gaps = 11/261 (4%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L G + Q+I D+ LDD R + E + +++G R+F+ Sbjct: 19 DARVLLAHALGWTRTQLITRGDAPLDDAAVERYRALEARRVAGEPVAQLVGMREFFGRPF 78 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 ++ D PRPETELLV++AL I+ +LDLGTG+GA+ +++ E P + Sbjct: 79 DVTPDVLIPRPETELLVEAALD----AIDGLPHAAVLDLGTGSGAIAVSIAAERPDARVW 134 Query: 126 GVDISCKALEIAKSNAVTNGVSER----FDTLQSDWFSSVEGL--FDVIVSNPPYIESVI 179 +D S AL +A+ NA + R LQSDW+++++ FD IVSNPPYI Sbjct: 135 ALDRSPAALAVAQRNADKLLDARRPGGPLHWLQSDWYAALDPALGFDAIVSNPPYIAQHD 194 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 ++R F+PR +L G DGLS RTI G +L G +E GY+Q V I Sbjct: 195 PHLAQGDLR-FEPRGALTDGADGLSAIRTIVAGAGAYLKPGGTLWIEHGYDQAEAVRAIL 253 Query: 240 ESRKLFLVNAFKDYGGNDRVL 260 S V + D +R Sbjct: 254 ASHGFVAVESLADLTAIERTT 274 >gi|332971800|gb|EGK10748.1| protein-(glutamine-N5) methyltransferase [Desmospora sp. 8437] Length = 314 Score = 270 bits (692), Expect = 1e-70, Method: Composition-based stats. Identities = 81/261 (31%), Positives = 122/261 (46%), Gaps = 5/261 (1%) Query: 7 SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66 S L G + L + + + + ++G ++FY Sbjct: 51 SELLLRTALGWDRTGLFTRFHEPLPFEAAQRFITWLKQRAEGIPVQYLIGEQEFYGRSFR 110 Query: 67 LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126 + PRPETE+LV++ L + I K V +D+GTG+GA+ + L E P ++ V Sbjct: 111 VEPSVLIPRPETEILVETVLREA-DGIWKGKAVTAVDMGTGSGAIAVTLAAERPAWEVVA 169 Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIVDCL 183 VD S AL++A+ N NG +R +Q DW + + DV+VSNPPYI + + L Sbjct: 170 VDRSPAALKVARQNGAKNGSGDRIRWMQGDWLEPLLKRDLRVDVVVSNPPYIPAGEIPRL 229 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES-R 242 +EVRD +PR++LDGG DGL YR + G+ L GL E+G +Q V + E Sbjct: 230 DVEVRDHEPRMALDGGPDGLDPYRILVRGIPAVLKNPGLVVFEVGEDQSETVGEMLEESL 289 Query: 243 KLFLVNAFKDYGGNDRVLLFC 263 V D G RV+ Sbjct: 290 AGAQVFFVSDLAGRPRVVAAR 310 >gi|254000221|ref|YP_003052284.1| HemK family modification methylase [Methylovorus sp. SIP3-4] gi|253986900|gb|ACT51757.1| modification methylase, HemK family [Methylovorus sp. SIP3-4] Length = 297 Score = 270 bits (692), Expect = 1e-70, Method: Composition-based stats. Identities = 88/274 (32%), Positives = 124/274 (45%), Gaps = 18/274 (6%) Query: 2 QALRDSHSFLCRVTG-LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60 +A ++ + + G + +I L + + R L E I ILG R+F Sbjct: 25 EARNEARMLMSQALGNVEHAWLIAHESDALPSAVASAFHDLLHRRLAGEPIAYILGNREF 84 Query: 61 YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120 + +RL +S T PRP+TE LV++ALA RI D +LDLGTGTGA+ LA+ P Sbjct: 85 FGLRLAVSPATLIPRPDTETLVEAALA----RIPSEDTREVLDLGTGTGAIALAIAAHRP 140 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSE-----------RFDTLQSDWFSSVEG-LFDVI 168 + +GVD S AL++A+ NA G++ + WF+ + G FDVI Sbjct: 141 KSRVIGVDASAAALQVARQNAEALGLAITEPDTHGITKGNVEFRLGSWFTPLAGLKFDVI 200 Query: 169 VSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228 VSNPPYI ++R +P +L G DGL R I H G +E G Sbjct: 201 VSNPPYIRKDDPHLQQGDLR-HEPFSALASGADGLDDIRIIVQHAPAHFQPSGWLLLEHG 259 Query: 229 YNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262 Y+Q V + V D G RV L Sbjct: 260 YDQADAVATLMRDTGFSDVQHAHDLAGIARVTLG 293 >gi|308186586|ref|YP_003930717.1| possible protoporphyrinogen oxidase [Pantoea vagans C9-1] gi|308057096|gb|ADO09268.1| possible protoporphyrinogen oxidase [Pantoea vagans C9-1] Length = 277 Score = 270 bits (692), Expect = 1e-70, Method: Composition-based stats. Identities = 93/262 (35%), Positives = 133/262 (50%), Gaps = 8/262 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 RD+ L VTG S +I ++ L D Q L + + R + E + ++G R+F++ Sbjct: 20 PKRDAEILLGFVTGKSRSWLIAFDETALSDAQLAQLDSLLARRARGEPVAHLVGEREFWS 79 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +S T PRP+TELLV+ ALA ILD+GTGTGA+ LAL E P Sbjct: 80 LPLRVSDATLIPRPDTELLVEQALAHL-----PATPSTILDMGTGTGAIALALASERPDC 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVD 181 + GVD A+E+A SNA +S L S WF ++ F +IVSNPPYI++ Sbjct: 135 QVTGVDRIEAAVELAGSNAEQLNLSNT-TFLLSHWFQALTPQHFTLIVSNPPYIDASDTH 193 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+PR +L GL+ RT+ + L G +E G+ Q V + ++ Sbjct: 194 LEQGDVR-FEPRSALVADEAGLADLRTLIEQAPAWLLPGGWLLLEHGWQQGEAVATLMQN 252 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 V +DYGGN RV L Sbjct: 253 NGYHAVETVRDYGGNPRVTLGQ 274 >gi|114046305|ref|YP_736855.1| HemK family modification methylase [Shewanella sp. MR-7] gi|113887747|gb|ABI41798.1| modification methylase, HemK family [Shewanella sp. MR-7] Length = 286 Score = 270 bits (692), Expect = 1e-70, Method: Composition-based stats. Identities = 82/261 (31%), Positives = 130/261 (49%), Gaps = 8/261 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A D+ FL S + P+ L Q + R + + I+G R+F++ Sbjct: 25 AHLDAEVFLLYCLNKSRAFLYTWPEKALTVEQWKRFQQMVQRRQQGVPVAHIVGEREFWS 84 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + ++ T PRP+TE+LV++AL + ++LDLGTGTGA+ LAL E + Sbjct: 85 LPFIVNDTTLIPRPDTEILVETAL-----NLPLESNAKVLDLGTGTGAIALALASERATW 139 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181 + VD +A+ +AK+N TN E+ + LQSDWFS+++ FD+IVSNPPYI+ Sbjct: 140 QITAVDKVEEAVALAKAN-RTNLKLEQVEILQSDWFSAIKAHDFDLIVSNPPYIDEADEH 198 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P+ +L +G + IA +L +G +E G+ Q V + Sbjct: 199 LHQGDVR-FEPQSALTAADEGFADLYYIAKTARDYLKPNGYILLEHGFEQAVKLREKLTE 257 Query: 242 RKLFLVNAFKDYGGNDRVLLF 262 V +D+G NDR + Sbjct: 258 LGYQNVATVRDFGSNDRCTMG 278 >gi|126172945|ref|YP_001049094.1| HemK family modification methylase [Shewanella baltica OS155] gi|125996150|gb|ABN60225.1| modification methylase, HemK family [Shewanella baltica OS155] Length = 282 Score = 270 bits (692), Expect = 1e-70, Method: Composition-based stats. Identities = 80/261 (30%), Positives = 125/261 (47%), Gaps = 8/261 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A D+ L S + P+ L Q + + K + I+G R+F++ Sbjct: 25 AHLDAEVLLLYCLNKSRSYLYTWPEKSLTVEQWKRFQQMVQKRQKGVPVAHIVGEREFWS 84 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + ++ T PRP+TE+LV++AL L +LDLGTGTGA+ LAL E + Sbjct: 85 LPFIVNDTTLIPRPDTEILVETALNMPLSTYAN-----VLDLGTGTGAIALALASERESW 139 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181 + VD A+ +A +N + + D LQSDWFS+V+ FD+IVSNPPYI+ Sbjct: 140 QITAVDKVDDAVALAIANRENLKLP-QVDILQSDWFSAVKSRDFDLIVSNPPYIDETDEH 198 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P+ +L +G + IA+ +L +G +E G+ Q V + Sbjct: 199 LHQGDVR-FEPQSALTAAEEGFADLYYIANTARDYLKPNGYILLEHGFEQAVRLRAKLIE 257 Query: 242 RKLFLVNAFKDYGGNDRVLLF 262 V +D+G NDR + Sbjct: 258 LGYENVATVRDFGSNDRCTMG 278 >gi|218133362|ref|ZP_03462166.1| hypothetical protein BACPEC_01227 [Bacteroides pectinophilus ATCC 43243] gi|217992235|gb|EEC58239.1| hypothetical protein BACPEC_01227 [Bacteroides pectinophilus ATCC 43243] Length = 289 Score = 270 bits (692), Expect = 1e-70, Method: Composition-based stats. Identities = 86/267 (32%), Positives = 123/267 (46%), Gaps = 11/267 (4%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 A DS + L +TG+ I++ + + I R H + I G FY Sbjct: 29 DAEYDSFALLEYITGMDRTAYILNGSKSVPEDIAERYDAVIDRRSSHIPLQHITGQAWFY 88 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 ++SD PR +TE+LV AL + +LD+ TG+G + + L E Sbjct: 89 GRGFNVNSDVLVPRQDTEVLVSEALKVINAKDS------VLDMCTGSGCIIITLALEKKL 142 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV----EGLFDVIVSNPPYIES 177 + +G DIS AL++A N G + ++S+ FS + + LFDVIVSNPPYI + Sbjct: 143 GRALGADISEAALKVASGNREKLGADD-VTFVKSNIFSDINVNDDELFDVIVSNPPYIAT 201 Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237 ++ L EVR DP I+LDG DGL YR I ++ G EIG Q DV Sbjct: 202 GEIETLTEEVRIHDPYIALDGLEDGLHFYREITQQSMNYIKSGGWLLYEIGCTQAHDVSD 261 Query: 238 IFESRKLFLVNAFKDYGGNDRVLLFCR 264 I + KD G DRV++ R Sbjct: 262 IMSEYGYSNIKVIKDLAGLDRVVMGQR 288 >gi|302186443|ref|ZP_07263116.1| modification methylase HemK [Pseudomonas syringae pv. syringae 642] Length = 277 Score = 270 bits (691), Expect = 1e-70, Method: Composition-based stats. Identities = 80/250 (32%), Positives = 124/250 (49%), Gaps = 7/250 (2%) Query: 16 GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75 G + P+ ++ + R K E + ILG + F+ + L ++ T PR Sbjct: 32 GKPRSFLHTWPERIVSTEAAVAFAGYMERRRKGEPVAYILGQQGFWKLDLEVAPHTLIPR 91 Query: 76 PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135 PETE+LV++AL + ++LDLGTGTGA+ LAL E +K VD +A+ Sbjct: 92 PETEMLVEAALEL----VPAFASAQLLDLGTGTGAIALALANERQQWKVTAVDRVPEAVA 147 Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194 +A+ N + + +S WFS ++G FD+I+SNPPYI +VR F+P Sbjct: 148 LAERNRKRLQL-NNAEVFESHWFSGLQGRQFDLIISNPPYISDADPHLSAGDVR-FEPSS 205 Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYG 254 +L G DGL RTI + HLN DG +E GY+Q V + + + +D G Sbjct: 206 ALVAGSDGLDDLRTIIEQAPAHLNADGWLLLEHGYDQGPAVRELLIRQGFERIQTRRDLG 265 Query: 255 GNDRVLLFCR 264 ++R+ C+ Sbjct: 266 EHERITFGCK 275 >gi|126736398|ref|ZP_01752140.1| modification methylase, HemK family protein [Roseobacter sp. CCS2] gi|126714219|gb|EBA11088.1| modification methylase, HemK family protein [Roseobacter sp. CCS2] Length = 288 Score = 270 bits (691), Expect = 1e-70, Method: Composition-based stats. Identities = 88/259 (33%), Positives = 134/259 (51%), Gaps = 8/259 (3%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 A RD+ +G+++ ++ + ++D + I R + E + + G R FY Sbjct: 25 DAARDARKLFAFASGVAAGRLTLILPEPVNDAVKTRFDALIARRSRFEPVSHLTGTRAFY 84 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 ++ D +PRPETE L+++AL + R+LDLGTG+G + + LL E+P Sbjct: 85 GRDFEVTKDVLDPRPETETLIEAAL--------RDPFARVLDLGTGSGCILVTLLAENPK 136 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181 GVG D S AL +A NA +GV +R +QSDW ++++ FD+IV+NPPYI + + Sbjct: 137 AVGVGGDASAVALTVALRNAQRHGVDDRATFVQSDWMAAIKRRFDLIVANPPYIAADEMA 196 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 L +VR+++PR++L DGLS YRTI L G EIG Q V + Sbjct: 197 GLSRDVREWEPRMALTDEADGLSAYRTIIKQAGDALIPGGRLMCEIGSTQGHAVAELMIR 256 Query: 242 RKLFLVNAFKDYGGNDRVL 260 L V D G DRV+ Sbjct: 257 AGLRHVGVIPDLDGRDRVV 275 >gi|254474677|ref|ZP_05088063.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Ruegeria sp. R11] gi|214028920|gb|EEB69755.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Ruegeria sp. R11] Length = 285 Score = 270 bits (691), Expect = 1e-70, Method: Composition-based stats. Identities = 96/262 (36%), Positives = 132/262 (50%), Gaps = 8/262 (3%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 RD+ L + + +V + LD I + ++G R+FY Sbjct: 25 DPARDARVLLAHAARIEASRVTLIAPEDLDPDVAERYEQLISLRAIRVPVSHLVGEREFY 84 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 R +SSD +PRPETE L+++ALA R+LDLG G+G + + LL E P Sbjct: 85 GRRFKVSSDVLDPRPETECLIEAALA--------EPFARVLDLGLGSGCILVTLLAEQPK 136 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181 G+GVD+S A A +NAV + V R D QSDWF+ VEG FD+IVSNPPYI ++ Sbjct: 137 ATGLGVDLSEAACLQASANAVLHRVEPRADVRQSDWFAQVEGQFDLIVSNPPYIALDEME 196 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 L EVR +P ++L G DGLS YR I+ V+ +L G +EIG Q V + + Sbjct: 197 GLSAEVRGHEPEMALTDGADGLSAYRAISQQVAEYLAPGGRVLLEIGPTQGAQVAEMLRT 256 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 L V D G DRV+ Sbjct: 257 AGLVDVRVLPDLDGRDRVVFGR 278 >gi|28210062|ref|NP_781006.1| methyltransferase [Clostridium tetani E88] gi|28202497|gb|AAO34943.1| methyltransferase [Clostridium tetani E88] Length = 292 Score = 270 bits (691), Expect = 2e-70, Method: Composition-based stats. Identities = 69/263 (26%), Positives = 120/263 (45%), Gaps = 7/263 (2%) Query: 4 LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63 + +S L +V ++++ D + ++ I + I ILG +F + Sbjct: 29 ILESQLLLGKVINKDRLFIMINKDYKVSKEEKDQYLKLIDIRKEKMPIKYILGICEFMGL 88 Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 + PRP+TE+LV+ ++ I K I D+ G+G + +++ Sbjct: 89 SFKIREGVLIPRPDTEILVEKSIEI----IRKNHYKNISDVCCGSGIIGISIATFVDKVN 144 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS---SVEGLFDVIVSNPPYIESVIV 180 D+ L++ + N N + + +S+ +D+IVSNPPYI+ + Sbjct: 145 VECFDVEEIPLKVTEENIKLNRLEGKVKVFKSNLLEYAIKNSIKYDMIVSNPPYIKKREI 204 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 L +V++++P I+LDGG DGL Y+ I LN G + EIGY+QK +V I E Sbjct: 205 TNLMEDVKNYEPHIALDGGEDGLYFYKNIVKQSKHLLNSGGTIAFEIGYDQKEEVSCILE 264 Query: 241 SRKLFLVNAFKDYGGNDRVLLFC 263 S + +KD G DRV++ Sbjct: 265 SNGFVNIECYKDLAGLDRVVIGT 287 >gi|325294566|ref|YP_004281080.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Desulfurobacterium thermolithotrophum DSM 11699] gi|325065014|gb|ADY73021.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Desulfurobacterium thermolithotrophum DSM 11699] Length = 288 Score = 270 bits (691), Expect = 2e-70, Method: Composition-based stats. Identities = 72/264 (27%), Positives = 119/264 (45%), Gaps = 8/264 (3%) Query: 3 ALRDSHSFLCRVTG-LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 A D+ L G ++ + + L + + I R K E + + G ++F+ Sbjct: 30 ARLDAELLLAHSLGFKDRIKLYTEFERPLTEEEVENYRQLIKRRAKGEPVAYLTGEKEFF 89 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 + PRPETELLV+ + ++ ++ I+D+GTG+G + L L K Sbjct: 90 GFTFKVQKGVLIPRPETELLVEVVYDY----LKDKEDKTIVDVGTGSGCIILTLYKLLGD 145 Query: 122 -FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180 + +G DIS AL++A N G + ++ D + DVIVSNPPYI Sbjct: 146 KHRYIGTDISSIALKVANENKELLGC-NNVEIVKMDLLKEINYPVDVIVSNPPYIPFGDK 204 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 L EV ++P ++L GG GL + ++ L+ +G ++EIG Q V ++ E Sbjct: 205 K-LDKEVLKYEPAVALFGGKSGLEIVERLIGESAKKLSSNGFFAIEIGKGQSKGVKKLLE 263 Query: 241 SRKLFLVNAFKDYGGNDRVLLFCR 264 + KD G +RV+ R Sbjct: 264 KAGFRNIKLHKDLAGVERVISAER 287 >gi|304397560|ref|ZP_07379437.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Pantoea sp. aB] gi|304354732|gb|EFM19102.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Pantoea sp. aB] Length = 276 Score = 270 bits (691), Expect = 2e-70, Method: Composition-based stats. Identities = 93/262 (35%), Positives = 131/262 (50%), Gaps = 8/262 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 RD+ L VTG S +I ++VL D Q L + + R + E + ++G R+F++ Sbjct: 20 PKRDAEILLGYVTGKSRSWLIAFDETVLSDEQLAQLNSLLARRARGEPVAHLVGEREFWS 79 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L ++ T PRP+TELLV+ ALA ILD+GTGTGA+ LAL E P Sbjct: 80 LPLRVTDATLIPRPDTELLVEQALAHL-----PATPSTILDMGTGTGAIALALASERPDC 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVD 181 + GVD A+E+A SNA +S L S WF ++ F +IVSNPPYI++ Sbjct: 135 QVTGVDRIQAAVELAGSNAQQLSLSNT-RFLLSHWFQALTPQRFSLIVSNPPYIDASDSH 193 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+PR +L GL+ RT+ + L G +E G+ Q V + Sbjct: 194 LEQGDVR-FEPRSALVADEAGLADLRTLIEQAPAWLLPGGWLLLEHGWQQGEAVATLMRQ 252 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 V DYGGN RV L Sbjct: 253 NGYHAVETVNDYGGNPRVTLGQ 274 >gi|110833385|ref|YP_692244.1| methyltransferase [Alcanivorax borkumensis SK2] gi|110646496|emb|CAL15972.1| methyltransferase [Alcanivorax borkumensis SK2] Length = 280 Score = 270 bits (691), Expect = 2e-70, Method: Composition-based stats. Identities = 92/260 (35%), Positives = 133/260 (51%), Gaps = 8/260 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A D+ LC V S + P+ L Q+ + R + E + ++G R+F+ Sbjct: 20 AALDAQVLLCHVLEQSRTWLFTWPERELTRAQQAEFEALLARREQGEPVAHLIGEREFFG 79 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 R ++++DT PRP+TE LV+ LA +LP R++DLGTGTGA+ + L E P + Sbjct: 80 RRFSVTADTLIPRPDTETLVEQVLALALPA-----NARVVDLGTGTGAIGITLALEQPAW 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182 + VD S AL++A +NA G + R LQ W + +G FD++VSNPPYIE V Sbjct: 135 QVTLVDNSAAALQVAAANARQLGATVR--CLQGSWLTPCDGFFDLVVSNPPYIEDGDVHL 192 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 +VR F+PR +L G GL+ TIA + L G +E G+ Q V + Sbjct: 193 AQGDVR-FEPRSALVAGDQGLADLITIAQQAAGKLVAGGWLLLEHGFEQGDAVRALLADI 251 Query: 243 KLFLVNAFKDYGGNDRVLLF 262 V +D GGNDRV L Sbjct: 252 GFEDVRTEQDLGGNDRVTLG 271 >gi|328542098|ref|YP_004302207.1| Protein-(glutamine-N5) methyltransferase, release factor-specific [polymorphum gilvum SL003B-26A1] gi|326411848|gb|ADZ68911.1| Protein-(Glutamine-N5) methyltransferase, release factor-specific [Polymorphum gilvum SL003B-26A1] Length = 281 Score = 270 bits (691), Expect = 2e-70, Method: Composition-based stats. Identities = 95/262 (36%), Positives = 134/262 (51%), Gaps = 4/262 (1%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 D+ GLS +++ D+ +D + + + RILG R+F+ Sbjct: 22 PELDARMLTADAAGLSPGDIVLREDAEVDPAREALARAHVAARCGGTPVGRILGRREFWG 81 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L+LS T EPRP+TE LV++ LA R + D+GTG+GA+ +A+L P Sbjct: 82 LELSLSPATLEPRPDTETLVEAVLA----RAGGEAAPVLADIGTGSGAIAIAVLTALPEA 137 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182 V DIS +AL A++NA+ +GV R +Q + + + FD IVSNPPYI S VD Sbjct: 138 CAVATDISLEALATARANALRHGVDGRMLFVQGSYGAPLGAGFDWIVSNPPYIASAEVDR 197 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 L EVR+ DPR +LDGG DGL YR I L G +VEIG +Q +V + Sbjct: 198 LAREVREHDPRRALDGGADGLDAYRAIVPAARHSLRPGGRLAVEIGADQGAEVAELMAEN 257 Query: 243 KLFLVNAFKDYGGNDRVLLFCR 264 F V +D G RV+ CR Sbjct: 258 GFFDVEIIRDLAGRPRVVSGCR 279 >gi|316932076|ref|YP_004107058.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Rhodopseudomonas palustris DX-1] gi|315599790|gb|ADU42325.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Rhodopseudomonas palustris DX-1] Length = 289 Score = 270 bits (691), Expect = 2e-70, Method: Composition-based stats. Identities = 105/262 (40%), Positives = 142/262 (54%), Gaps = 3/262 (1%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A D+ + VTGL ++V + L + L R L E + RILG R+F+ Sbjct: 26 AALDARLLVGEVTGLDLTGLLVQAERPLTKDESERLRTFAARRLAGEPVARILGVREFWG 85 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + LS+DT PRP+TE +VD+ALA R RILD+GTG+GA+ LALL E P Sbjct: 86 LPFELSADTLVPRPDTETVVDAALAVLGER--DAPAPRILDIGTGSGAILLALLSELPGA 143 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182 GV DIS AL A+ NA G++ R + D+ S++ G FD+IVSNPPYI + Sbjct: 144 GGVATDISLGALRTARRNAERLGLARRARFVACDYASALSGPFDLIVSNPPYIPVNEIAE 203 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 L EVR+ DPR +LDGG DGL YR I + L DG VEIG Q+ DV + ++ Sbjct: 204 LDREVREHDPRRALDGGADGLDAYRKIIPESAGLLQPDGALVVEIGQGQETDVSALMQAA 263 Query: 243 KLFLVNAFK-DYGGNDRVLLFC 263 L + + F+ D G R + Sbjct: 264 GLTVSDPFRADLSGIFRAVTGR 285 >gi|295094044|emb|CBK83135.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Coprococcus sp. ART55/1] Length = 287 Score = 270 bits (690), Expect = 2e-70, Method: Composition-based stats. Identities = 73/263 (27%), Positives = 129/263 (49%), Gaps = 4/263 (1%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 A D+ ++G++ +I+ + +DD + I + + I G ++F Sbjct: 21 DADIDADILWQYLSGMNRMDMIMAREDDVDDDKSEAYMKLIEKRSTRIPLQYITGEQNFM 80 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 + D PR +TE LV++AL + V +LD+ G+G + ++ + Sbjct: 81 GYDFDTAEDVLIPRMDTETLVETALKLVK---DADHNVDVLDMCCGSGCIGVSFGLWNKN 137 Query: 122 FKGVGVDISCKALEIAKSNAVTNGV-SERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180 + V D+S A+ +A+ N +RF+ +++D F + G +D+I+SNPPYI S ++ Sbjct: 138 SRIVLADVSEAAIGLARRNVAKLCAGDDRFEVVRTDLFEQISGKYDLILSNPPYIRSDVI 197 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 + L EVR+ +P ++LDG DGL YR IAD ++ +G EIG +Q DV + Sbjct: 198 ETLMPEVREHEPHLALDGTADGLYFYRIIADKAREYIKDEGYVVFEIGNDQAEDVQYLLV 257 Query: 241 SRKLFLVNAFKDYGGNDRVLLFC 263 ++ +D GNDRV+ Sbjct: 258 DSGYDDIHVVQDLSGNDRVVYGR 280 >gi|78187349|ref|YP_375392.1| modification methylase HemK [Chlorobium luteolum DSM 273] gi|78167251|gb|ABB24349.1| Modification methylase HemK [Chlorobium luteolum DSM 273] Length = 296 Score = 270 bits (690), Expect = 2e-70, Method: Composition-based stats. Identities = 78/264 (29%), Positives = 123/264 (46%), Gaps = 6/264 (2%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 +A + L V ++ + + + + + + L + I G + FY Sbjct: 28 EARLGAELLLAHVLKMARLDLYLQHERPVYPDELERFRELCRQRLGGRPLQYITGEQWFY 87 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPR-IEKRDVVRILDLGTGTGAVCLALLKESP 120 + + PRPETELLV+ AL V RILD GTG+G + L + P Sbjct: 88 GLPFHVDRRVLIPRPETELLVEFALELLESDGASASGVPRILDAGTGSGCIALTMAIRMP 147 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD----WFSSVEGLFDVIVSNPPYIE 176 + VG+D+S +ALE+A++NA +G +R D FS FD++VSNPPYI Sbjct: 148 TLQAVGIDVSLEALEVARTNAERHGAGDRVSFAVGDMTDPLFSPPGAPFDMLVSNPPYIP 207 Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236 L EVRD +P+++L + G+ YR +A R L G ++EI + VV Sbjct: 208 ESEWAGLQPEVRDHEPKLALTVPV-GMECYRALAAMAGRLLRPGGRIALEIHADGAGGVV 266 Query: 237 RIFESRKLFLVNAFKDYGGNDRVL 260 + E + + KDY G +R++ Sbjct: 267 ELLEEAGMLDIVVKKDYAGLNRIV 290 >gi|89897679|ref|YP_521166.1| hypothetical protein DSY4933 [Desulfitobacterium hafniense Y51] gi|89337127|dbj|BAE86722.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 285 Score = 270 bits (690), Expect = 2e-70, Method: Composition-based stats. Identities = 77/269 (28%), Positives = 122/269 (45%), Gaps = 11/269 (4%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 D+ L + L Q+ ++ + L Q I R + E + I+ ++F Sbjct: 21 NPRWDADLLLGHILSLRREQLYLEREQTLGPEQEAAYQQMISRRARREPLQYIVKHQEFM 80 Query: 62 NVRLTLSSDTFEPRPETELLVDSALA------FSLPRIEKRDVVRILDLGTGTGAVCLAL 115 + + PR +TE+LV+ L S R + I DL TG+GA+ +++ Sbjct: 81 GLDFYVDERVLIPRADTEILVEKVLELKKEWQHSADRAGGGESPHIADLCTGSGALAISI 140 Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPY 174 P + VG D+S AL++A+ N GV R Q D+ + G +D+IVSNPPY Sbjct: 141 AHFWPQAEVVGTDLSRDALDVARFNGERLGV--RIQWRQGDFLEPLRGDSWDLIVSNPPY 198 Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234 + L E+ +PR++ GG DGL YR +A L + G+ VEIG+ Q Sbjct: 199 VTQAEYGELAPELAK-EPRMAFLGGADGLDFYRELAREARSLLREKGIILVEIGWQQGNS 257 Query: 235 VVRIFESRKLFLVNAFKDYGGNDRVLLFC 263 V +F+ + +D GG DRV+ Sbjct: 258 VAELFQQQGFQT-QIVQDLGGRDRVVFAR 285 >gi|293392124|ref|ZP_06636458.1| protein methyltransferase HemK [Aggregatibacter actinomycetemcomitans D7S-1] gi|290952658|gb|EFE02777.1| protein methyltransferase HemK [Aggregatibacter actinomycetemcomitans D7S-1] Length = 299 Score = 270 bits (690), Expect = 2e-70, Method: Composition-based stats. Identities = 91/270 (33%), Positives = 146/270 (54%), Gaps = 15/270 (5%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L VT S ++ ++ LD++ LT + R L+ E I ILG ++F+++ L Sbjct: 26 DAQVLLQFVTQKSRAFILAFGETALDEKTLEKLTALLARRLQGEPIAYILGEKEFWSLPL 85 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEK----RDVVRILDLGTGTGAVCL-------A 114 +S+ T PRP+TE+LV+ A+A ++ +++K RILDLGTGTGA+ L + Sbjct: 86 NVSAGTLIPRPDTEILVEKAVAIAIEKLQKCGQNSQRFRILDLGTGTGAIALALASALKS 145 Query: 115 LL-KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173 + K + +GVD++ + + +AKSN N + +QS WF +V G FD+I+SNPP Sbjct: 146 IAQKHAVQLDIIGVDLTPEVVALAKSNGAKNQL--NVTFVQSRWFENVTGTFDLILSNPP 203 Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233 YI++ +VR F+P +L +G + R I + + ++G VE G+ Q Sbjct: 204 YIDAHDEHLTQGDVR-FEPLSALVAAEEGYADLRHIIANAPKFMRENGYLLVEHGWQQGE 262 Query: 234 DVVRIFESRKLFLVNAFKDYGGNDRVLLFC 263 V IF+ V +DYG N+RV L C Sbjct: 263 KVRSIFQGNFWSAVETLRDYGNNERVTLGC 292 >gi|254253377|ref|ZP_04946695.1| Methylase [Burkholderia dolosa AUO158] gi|124895986|gb|EAY69866.1| Methylase [Burkholderia dolosa AUO158] Length = 280 Score = 270 bits (690), Expect = 2e-70, Method: Composition-based stats. Identities = 82/261 (31%), Positives = 122/261 (46%), Gaps = 11/261 (4%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L G + Q+I D LD R E + +++G R+F+ Sbjct: 19 DARVLLAHALGWTRTQLITRGDEPLDAAAIERYRALEARRAAGEPVAQLVGVREFFGRPF 78 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 ++ D PRPETELLV++AL I+ +LDLGTG+GA+ +++ E P + Sbjct: 79 DVTPDVLIPRPETELLVEAALD----AIDGLPYPAVLDLGTGSGAIAVSIAAERPDARVW 134 Query: 126 GVDISCKALEIAKSNAVTNGVSER----FDTLQSDWFSSVEG--LFDVIVSNPPYIESVI 179 +D S AL +A+ NA R LQSDW+++++ +FD IVSNPPYI Sbjct: 135 ALDRSPAALAVARRNADKLLDPHRPGGPLHWLQSDWYTALDAAPVFDAIVSNPPYIAQHD 194 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 ++R F+PR +L DGLS RTI G +L G +E GY+ V + Sbjct: 195 PHLAQGDLR-FEPRGALTDDADGLSAIRTIVAGAGTYLKPGGTLWIEHGYDHAEAVRTLL 253 Query: 240 ESRKLFLVNAFKDYGGNDRVL 260 S V + D +R Sbjct: 254 TSHGFVAVESLADLAAIERTT 274 >gi|115350467|ref|YP_772306.1| HemK family modification methylase [Burkholderia ambifaria AMMD] gi|115280455|gb|ABI85972.1| [protein release factor]-glutamine N5-methyltransferase [Burkholderia ambifaria AMMD] Length = 280 Score = 270 bits (690), Expect = 2e-70, Method: Composition-based stats. Identities = 85/265 (32%), Positives = 128/265 (48%), Gaps = 11/265 (4%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L G + Q+I D+ L+ R + E + +++G R+F+ Sbjct: 19 DARVLLAHALGWTRTQLITRGDAPLEPASIERYRALEARRVAGEPVAQLVGMREFFGRPF 78 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 ++ D PRPETELLV++AL I+ R +LDLGTG+GA+ +++ E P + Sbjct: 79 DVTPDVLIPRPETELLVEAALD----AIDGRPHPAVLDLGTGSGAIAVSIAAERPDARVW 134 Query: 126 GVDISCKALEIAKSNAVTNGVSER----FDTLQSDWFSSVEG--LFDVIVSNPPYIESVI 179 +D S AL++A+ NA + R LQSDW+++++ FD IVSNPPYI Sbjct: 135 ALDRSPAALDVARRNADKLLDARRPGGPLHWLQSDWYAALDPALAFDTIVSNPPYIAQHD 194 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 ++R F+PR +L DGLS RTI G L G +E GY+Q V + Sbjct: 195 PHLAQGDLR-FEPRGALTDDADGLSAIRTIVAGAGAFLKPGGTLWIEHGYDQAEAVRALL 253 Query: 240 ESRKLFLVNAFKDYGGNDRVLLFCR 264 SR V + D +R R Sbjct: 254 VSRGFVAVESLADLAAIERTTGGRR 278 >gi|237748572|ref|ZP_04579052.1| methyltransferase HemK MTase hemK [Oxalobacter formigenes OXCC13] gi|229379934|gb|EEO30025.1| methyltransferase HemK MTase hemK [Oxalobacter formigenes OXCC13] Length = 279 Score = 270 bits (690), Expect = 2e-70, Method: Composition-based stats. Identities = 81/264 (30%), Positives = 123/264 (46%), Gaps = 11/264 (4%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 + L G S ++I D L Q L++ + R + E + I G R+F+ + Sbjct: 22 LELRILLEYAIGFSRVKLITHSDHPLTTEQAKALSDVVSRRVCGEPVAYITGKREFFGLS 81 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 + D PRPETELLV+ AL +I+D+GTG+GA+ +A+ E P Sbjct: 82 FAVCPDVLIPRPETELLVELALERL------PHGGKIVDMGTGSGAIAIAIASERPDAHV 135 Query: 125 VGVDISCKALEIAKSNA-VTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVIV 180 D+S KAL +A NA + +WF +++ FD+IVSNPPYI+S Sbjct: 136 FATDVSEKALNMATHNALALLKGKQTVHFSAGNWFYALKNVNETFDLIVSNPPYIDSKDD 195 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 ++R F+P +L DGLS + + G +L + G +E GY+Q V V + Sbjct: 196 HLQKGDLR-FEPVGALTDHADGLSALKILVSGAQAYLKRGGWLLMEHGYDQAVAVRALLA 254 Query: 241 SRKLFLVNAFKDYGGNDRVLLFCR 264 V ++KD G RV R Sbjct: 255 RAGFEEVQSWKDLAGIGRVSGGKR 278 >gi|307823418|ref|ZP_07653647.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Methylobacter tundripaludum SV96] gi|307735403|gb|EFO06251.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Methylobacter tundripaludum SV96] Length = 284 Score = 270 bits (690), Expect = 2e-70, Method: Composition-based stats. Identities = 80/259 (30%), Positives = 120/259 (46%), Gaps = 7/259 (2%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 AL D+ LC+ + PD L + + + I I G R+F++ Sbjct: 22 ALLDAEILLCQALNQPRSHLRAWPDKPLLPEHLAAFRALLEQRQQGIPIAYITGNREFWS 81 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 +S D PRP+TELL++ SL I D V+I+DLGTG+G + + L E P Sbjct: 82 RDFQVSPDVLIPRPDTELLIEL----SLKLIPADDPVKIIDLGTGSGIIAITLAAERPHA 137 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181 + D S AL IA+ NA + + QS+WF+ V F++++SNPPYI Sbjct: 138 QISATDFSLAALRIARLNADKHHI-NTIQFYQSNWFADVPATQFNLVISNPPYIAEDDSH 196 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P+ +L GL + IAD +L G +E GY+Q+ V +F+ Sbjct: 197 LQQGDVR-FEPQTALCAAEQGLGDIKIIADAARNYLEPRGHLLIEHGYDQQQQVQTLFKD 255 Query: 242 RKLFLVNAFKDYGGNDRVL 260 V + D G RV Sbjct: 256 LHYDNVQTYTDLSGQPRVT 274 >gi|21672455|ref|NP_660522.1| hypothetical protein BUsg166 [Buchnera aphidicola str. Sg (Schizaphis graminum)] gi|25090515|sp|Q8K9W9|HEMK_BUCAP RecName: Full=Protein methyltransferase hemK homolog gi|21623069|gb|AAM67733.1| HemK [Buchnera aphidicola str. Sg (Schizaphis graminum)] Length = 275 Score = 270 bits (690), Expect = 2e-70, Method: Composition-based stats. Identities = 86/263 (32%), Positives = 133/263 (50%), Gaps = 7/263 (2%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 ++ L V + +I++ + L Q L N I R E I I+G ++F+ Sbjct: 19 NPRYEAEILLSHVLKCTRIAIIINQEIDLSKEQYQKLNNFIYRRSIGEPIAYIIGKKEFW 78 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 ++ L +S T PRP+TE+LV+ L+ ++ ILDLGTG+GA+ LAL Sbjct: 79 SLSLCVSYKTLIPRPDTEILVEKILSKV-----NKNFRSILDLGTGSGAIALALASVCSH 133 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181 + +GVD S AL+IAK N + + + S+WFS + F +IVSNPPYI + Sbjct: 134 WNIIGVDNSYSALKIAKINGLKLNLK-NVEFFYSNWFSHINEKFHIIVSNPPYIGIKEIQ 192 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 L ++ ++P +L DGL I S++L G +E G+ QK+ V F+ Sbjct: 193 SLKKDIF-YEPFNALISKKDGLLDIELIIQKASQYLFDKGWLFIEHGWKQKLKVQYFFKK 251 Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264 F + +FKDYGGNDR+ + Sbjct: 252 YNFFCIQSFKDYGGNDRITFGQK 274 >gi|260433481|ref|ZP_05787452.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Silicibacter lacuscaerulensis ITI-1157] gi|260417309|gb|EEX10568.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Silicibacter lacuscaerulensis ITI-1157] Length = 281 Score = 270 bits (690), Expect = 2e-70, Method: Composition-based stats. Identities = 93/259 (35%), Positives = 133/259 (51%), Gaps = 8/259 (3%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 RD+ L + + +V + L + + +LG R+FY Sbjct: 25 DPARDARVLLAHAARIEASRVTLIAPEELSPEIAERYEQLVSLRAIRVPVSHLLGEREFY 84 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 R +S D +PRPETE L+++AL+ + R+LDLG G+G + + LL E Sbjct: 85 GRRFRVSRDVLDPRPETEALIEAALS--------QPFDRVLDLGVGSGCILVTLLAERTS 136 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181 G+GVD+S A A +NAVT+GV +R + +SDWF ++ G FD+IVSNPPYI +D Sbjct: 137 ATGLGVDLSEAACLQASANAVTHGVQDRAEIQRSDWFENIGGYFDLIVSNPPYIALDEMD 196 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 L EVR+ +PR++L DGL YR IA G HL G VEIG Q V +F++ Sbjct: 197 GLSPEVREHEPRLALTDEADGLDAYRRIAAGAPDHLMPGGRILVEIGPTQAKAVSALFDA 256 Query: 242 RKLFLVNAFKDYGGNDRVL 260 L + D G DRV+ Sbjct: 257 AGLSDIRIIPDLDGRDRVV 275 >gi|134294602|ref|YP_001118337.1| HemK family modification methylase [Burkholderia vietnamiensis G4] gi|134137759|gb|ABO53502.1| [protein release factor]-glutamine N5-methyltransferase [Burkholderia vietnamiensis G4] Length = 280 Score = 269 bits (689), Expect = 2e-70, Method: Composition-based stats. Identities = 85/261 (32%), Positives = 127/261 (48%), Gaps = 11/261 (4%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L G + Q+I D+ L+ R + E + +++G R+F+ Sbjct: 19 DARVLLSHALGWTRTQLITRGDAPLEPAAIARYRALEARRVAGEPVAQLVGMREFFGRPF 78 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 ++ D PRPETELLV++AL I+ R +LDLGTG+GA+ +++ E P + Sbjct: 79 DVTPDVLIPRPETELLVEAALD----AIDGRPHPAVLDLGTGSGAIAVSIAAERPDARVW 134 Query: 126 GVDISCKALEIAKSNAVTNGVSER----FDTLQSDWFSSVEG--LFDVIVSNPPYIESVI 179 +D S ALE+A+ NA + R LQSDW+++++ FD IVSNPPYI Sbjct: 135 ALDRSPAALEVAQRNAAKLLDARRPGGPLHWLQSDWYAALDPALAFDAIVSNPPYIAQHD 194 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 ++R F+PR +L DGLS RTI G HL G +E GY+Q V + Sbjct: 195 PHLEQGDLR-FEPRGALTDDADGLSAIRTIVAGAGAHLKPGGTLWIEHGYDQAEAVRALL 253 Query: 240 ESRKLFLVNAFKDYGGNDRVL 260 S V + D +R Sbjct: 254 ASHGFVAVESLADLAAIERTT 274 >gi|27262484|gb|AAN87523.1| methyltransferase [Heliobacillus mobilis] Length = 319 Score = 269 bits (689), Expect = 2e-70, Method: Composition-based stats. Identities = 74/282 (26%), Positives = 122/282 (43%), Gaps = 23/282 (8%) Query: 4 LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63 ++ S ++ L L ++ K + I G ++F+ + Sbjct: 31 RLEAEVLFAYGMEKSRAGLLASLRDPLTVEMAEKLERLVMERSKGCPLQYITGRQEFWGM 90 Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR--------------------ILD 103 L ++ PR +TELLV++AL ++ + + D Sbjct: 91 ELQVNPAVLIPRADTELLVEAALTSLKEKMAGFPKRQDKGCDDSPPAQGSVAGKEIWLAD 150 Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG 163 +GTG+GA+ LA+ KE + D+S +AL A+ NA NG+ R + D V Sbjct: 151 VGTGSGAIALAMAKELRCVNVIATDLSPEALATARGNAERNGLGHRITFWEGDLLEPVIA 210 Query: 164 ---LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220 ++SNPPYI + + L EV F+PR++LDGG DGL YR + + L Sbjct: 211 AGLPLQAVLSNPPYIPTEDIGGLQREVAQFEPRLALDGGGDGLHLYRRLIPQARKVLVPG 270 Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262 GL ++EIG++Q V + V D+ G+DRV++ Sbjct: 271 GLIALEIGFDQGSSVAELMVQHGFVEVRVLPDFQGHDRVVMG 312 >gi|170731834|ref|YP_001763781.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Burkholderia cenocepacia MC0-3] gi|169815076|gb|ACA89659.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Burkholderia cenocepacia MC0-3] Length = 280 Score = 269 bits (689), Expect = 2e-70, Method: Composition-based stats. Identities = 85/261 (32%), Positives = 126/261 (48%), Gaps = 11/261 (4%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L G + Q+I D+ LD R + E + +++G R+F+ Sbjct: 19 DARVLLAHALGWTRTQLITRGDAPLDAAAIERYRALEARRVAGEPVAQLVGTREFFGRPF 78 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 ++ D PRPETELLV++AL I+ +LDLGTG+GA+ +++ E P + Sbjct: 79 DVTPDVLIPRPETELLVEAALD----AIDGLPHAAVLDLGTGSGAIAVSIAAERPDARVW 134 Query: 126 GVDISCKALEIAKSNAVTNGVSER----FDTLQSDWFSSVEGL--FDVIVSNPPYIESVI 179 +D S AL +A+ NA + R LQSDW+++++ FD IVSNPPYI Sbjct: 135 ALDRSPAALAVAQRNADKLLDARRPGGPLHWLQSDWYAALDPALGFDAIVSNPPYIAQHD 194 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 ++R F+PR +L DGLS RTI G S +L G +E GY+Q V I Sbjct: 195 PHLAQGDLR-FEPRGALTDDADGLSAIRTIVAGASAYLKPGGTLWIEHGYDQAEAVRAIL 253 Query: 240 ESRKLFLVNAFKDYGGNDRVL 260 S V + D +R Sbjct: 254 ASHGFVAVESLADLAAIERTT 274 >gi|114704326|ref|ZP_01437234.1| protoporphyrinogen oxidase [Fulvimarina pelagi HTCC2506] gi|114539111|gb|EAU42231.1| protoporphyrinogen oxidase [Fulvimarina pelagi HTCC2506] Length = 298 Score = 269 bits (689), Expect = 2e-70, Method: Composition-based stats. Identities = 104/259 (40%), Positives = 145/259 (55%), Gaps = 1/259 (0%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ + V G+ + ++ + ++ T I R E +HRILG R FY Sbjct: 32 DTRVLMADVLGIETSSLLARRERPIEPDAEERFTAYISRRRSGEPVHRILGKRGFYGHDF 91 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 LS+ T EPRP+TE++V+ +AF L +++ +R+LD+GTG+G + L++L P Sbjct: 92 ELSAGTLEPRPDTEIVVEMGIAF-LRTVDRDRPLRVLDIGTGSGVIALSILVALPHTHAF 150 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185 G DIS AL A+ NA V RF+T +D+ + + G D+ +SNPPYI + + L Sbjct: 151 GTDISEDALATARRNAKRLKVDARFETSVTDYAAGITGPLDLAISNPPYIATRDIAGLSS 210 Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245 EVRDFDP+ +LDGG DGL YR IA V L DG VEIG +QK V RIFE+ Sbjct: 211 EVRDFDPKSALDGGEDGLKAYRAIAAQVRSVLADDGSVVVEIGIDQKDPVTRIFEACGFT 270 Query: 246 LVNAFKDYGGNDRVLLFCR 264 L + KDYGG R L F R Sbjct: 271 LSDWRKDYGGIVRALRFSR 289 >gi|117919222|ref|YP_868414.1| HemK family modification methylase [Shewanella sp. ANA-3] gi|117611554|gb|ABK47008.1| modification methylase, HemK family [Shewanella sp. ANA-3] Length = 286 Score = 269 bits (689), Expect = 2e-70, Method: Composition-based stats. Identities = 81/261 (31%), Positives = 129/261 (49%), Gaps = 8/261 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A D+ FL + + P+ L Q + R + + I+G R+F++ Sbjct: 25 AHLDAEVFLLYCLNKNRAFLYTWPEKALTVEQWKRFQQMVQRRQQGVPVAHIVGEREFWS 84 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + ++ T PRP+TE+LV++AL + ++LDLGTGTGA+ LAL E + Sbjct: 85 LPFIVNDTTLIPRPDTEILVETAL-----NLPLESNAKVLDLGTGTGAIALALASERATW 139 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181 + VD A+ +AK+N TN E+ + LQSDWFS+++ FD+IVSNPPYI+ Sbjct: 140 QITAVDKVEDAVALAKAN-RTNLKLEQVEILQSDWFSAIKAHDFDLIVSNPPYIDEADEH 198 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P+ +L +G + IA +L +G +E G+ Q V + Sbjct: 199 LHQGDVR-FEPQSALTAADEGFADLYYIAKTARDYLKPNGYILLEHGFEQAVKLREKLTE 257 Query: 242 RKLFLVNAFKDYGGNDRVLLF 262 V +D+G NDR + Sbjct: 258 LGYQNVATVRDFGSNDRCTMG 278 >gi|293365353|ref|ZP_06612070.1| protein-(glutamine-N5) methyltransferase [Streptococcus oralis ATCC 35037] gi|307703895|ref|ZP_07640836.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptococcus oralis ATCC 35037] gi|291316803|gb|EFE57239.1| protein-(glutamine-N5) methyltransferase [Streptococcus oralis ATCC 35037] gi|307622730|gb|EFO01726.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptococcus oralis ATCC 35037] Length = 278 Score = 269 bits (689), Expect = 2e-70, Method: Composition-based stats. Identities = 76/247 (30%), Positives = 120/247 (48%), Gaps = 8/247 (3%) Query: 16 GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75 LS + + + F+ + + H+ I+G +F+ ++L + PR Sbjct: 33 NLSFTDFVFALQQEVTKEEENFVEEIYQQLVAHKPAQYIIGHAEFFGMQLKVDERVLIPR 92 Query: 76 PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135 PETE LV+ L + + +++LD+GTG+GA+ LAL K P + DIS +AL+ Sbjct: 93 PETEELVELILTEN-----PEENLKVLDIGTGSGAIALALAKNRPDWSVTAADISQEALQ 147 Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195 +A NA + +SD F+ + +D+IVSNPPYI +GL V +P ++ Sbjct: 148 LASENAKNQNL--NIFFKKSDCFAEISEKYDIIVSNPPYISREDESEVGLNVLHSEPHLA 205 Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDYG 254 L DGL+ YR IA+ +L G +EIGY Q V +F V KD Sbjct: 206 LFADEDGLAIYRRIAEDAKDYLTDGGKIYLEIGYKQGQSVPALFRKYLPEKRVRTLKDQF 265 Query: 255 GNDRVLL 261 G DR+++ Sbjct: 266 GQDRMVV 272 >gi|224368816|ref|YP_002602977.1| HemK [Desulfobacterium autotrophicum HRM2] gi|223691532|gb|ACN14815.1| HemK [Desulfobacterium autotrophicum HRM2] Length = 295 Score = 269 bits (689), Expect = 2e-70, Method: Composition-based stats. Identities = 81/257 (31%), Positives = 118/257 (45%), Gaps = 5/257 (1%) Query: 7 SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66 + L + + + D L+ + I R E + I G + F+ T Sbjct: 33 AEILLSHALSIKRLDLYLQHDRPLNRDELAAFRQLIERRGDREPVAYITGTKGFWESEFT 92 Query: 67 LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126 ++ PRP+TE+LV+ AL F + + R+L+LG G+GAV +++ K +P Sbjct: 93 VAPGVLIPRPDTEVLVEQALEFL--ARKNISMGRVLELGVGSGAVIISIAKANPGLYCFA 150 Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL--FDVIVSNPPYIESVIVDCLG 184 DIS LE+A N + WFS G FD+IVSNPPYI + + L Sbjct: 151 TDISLIPLEVAAFNVKQELELPNLSFVAGSWFSPFNGRAKFDLIVSNPPYIPTGDIQGLQ 210 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-K 243 EV F+P ++LDGG DGL R I HL G+ +E G Q+ V +IF+ Sbjct: 211 PEVSRFEPSLALDGGEDGLDCIRLIMAKACDHLVPGGVLLMETGSGQRRGVEKIFKECPG 270 Query: 244 LFLVNAFKDYGGNDRVL 260 V F DY G RV+ Sbjct: 271 FSTVEFFNDYAGLHRVV 287 >gi|219682102|ref|YP_002468486.1| HemK protein [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|219621835|gb|ACL29991.1| HemK protein [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|311085915|gb|ADP65997.1| HemK protein [Buchnera aphidicola str. LL01 (Acyrthosiphon pisum)] gi|311086486|gb|ADP66567.1| HemK protein [Buchnera aphidicola str. TLW03 (Acyrthosiphon pisum)] gi|311087069|gb|ADP67149.1| HemK protein [Buchnera aphidicola str. JF99 (Acyrthosiphon pisum)] gi|311087621|gb|ADP67700.1| HemK protein [Buchnera aphidicola str. JF98 (Acyrthosiphon pisum)] Length = 277 Score = 269 bits (689), Expect = 2e-70, Method: Composition-based stats. Identities = 86/259 (33%), Positives = 136/259 (52%), Gaps = 7/259 (2%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 +S L VT + +I+ + L ++Q +L + I R E I I+ ++F+++ L Sbjct: 23 ESELLLSYVTKHTRSFIIISDEIQLTEKQYKYLNHLIHRRSLGEPIAYIIKEKEFWSLSL 82 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 +S DT PRP+TE+LV+ AL+ K + ILDLGTG GA+ LAL + + + Sbjct: 83 CVSYDTLIPRPDTEILVERALSKI-----KSNSACILDLGTGCGAIALALASINSNWNII 137 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185 G+D S AL IA+ NA SDWFS+++ F++IVSNPPY+ + Sbjct: 138 GIDKSENALAIARINASKLNFK-NVTFFFSDWFSNIKKKFNIIVSNPPYVSKKEIKFFKK 196 Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245 ++ F+P +L +GLS I +L G +E G+ QKV V +F+ Sbjct: 197 DIF-FEPLSALISDNNGLSDIENIIKNSKHYLFYGGWLMIEHGWRQKVKVQYLFKKYNFH 255 Query: 246 LVNAFKDYGGNDRVLLFCR 264 + +++DYGGNDRV + + Sbjct: 256 EIESYQDYGGNDRVTIGKK 274 >gi|119357671|ref|YP_912315.1| HemK family modification methylase [Chlorobium phaeobacteroides DSM 266] gi|119355020|gb|ABL65891.1| modification methylase, HemK family [Chlorobium phaeobacteroides DSM 266] Length = 301 Score = 269 bits (689), Expect = 2e-70, Method: Composition-based stats. Identities = 84/268 (31%), Positives = 128/268 (47%), Gaps = 11/268 (4%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 +A + L V GL + ++ + + + + L+ + + I G + FY Sbjct: 31 EARISAELLLASVLGLDRLGLYLNHNRPVYPGELEAFRALCRQRLEGKPVQYITGEQFFY 90 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV----VRILDLGTGTGAVCLALLK 117 + + PRPETELLV+ AL F L + DV + +LD+GTG+G + + L Sbjct: 91 GLPFFVDKRVLIPRPETELLVEHALEF-LGHVSAADVSEAALHLLDIGTGSGCIAVTLAS 149 Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS-----SVEGLFDVIVSNP 172 P +DIS +AL +A++NA +GV++R L +D FS + FDVIVSNP Sbjct: 150 RLPCLMVTAIDISTEALVVARNNAERHGVADRIRFLHADLFSLPDERGLSAPFDVIVSNP 209 Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232 PYI L EVR F+P+++L DG+ Y +A+ L G+ E + Sbjct: 210 PYIAEDEWAGLQPEVRLFEPQLALTT-RDGIECYHAVAEVAPSLLKSGGMLCFESHADAA 268 Query: 233 VDVVRIFESRKLFLVNAFKDYGGNDRVL 260 + V I E V KDY G DRV+ Sbjct: 269 LKVAGIMERWGFSSVAVMKDYSGLDRVV 296 >gi|307731137|ref|YP_003908361.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Burkholderia sp. CCGE1003] gi|307585672|gb|ADN59070.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Burkholderia sp. CCGE1003] Length = 289 Score = 269 bits (689), Expect = 2e-70, Method: Composition-based stats. Identities = 85/261 (32%), Positives = 132/261 (50%), Gaps = 11/261 (4%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 ++ L V G Q+I D L+ R + E + +++G R+F+ + Sbjct: 27 LEARILLTHVLGWRQTQLITRADEALESACVERYLALQARRVAGEPVAQLVGVREFFGLE 86 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 ++ PRPETELLV++ALA +E R+LDLGTGTGA+ +A+ P + Sbjct: 87 FEVTPHVLIPRPETELLVETALA----AMENLARPRVLDLGTGTGAIAVAIAAMRPDAQV 142 Query: 125 VGVDISCKALEIAKSNAVTNGVSER----FDTLQSDWFSSVEG--LFDVIVSNPPYIESV 178 +D S +AL++A+ NA ++R +QSDW+ S+E FDVIVSNPPYI S Sbjct: 143 SALDRSTEALKVAERNAARLLDAKRPGGAVTFMQSDWYGSLESTLRFDVIVSNPPYIASG 202 Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238 ++R ++PR +L DGLS R I G L G+ +E GY+Q V + Sbjct: 203 DPHLTQGDLR-YEPRGALTDEADGLSAIRKIVAGAPARLAPQGVLWMEHGYDQAQAVRAL 261 Query: 239 FESRKLFLVNAFKDYGGNDRV 259 ++ V + +D G +R+ Sbjct: 262 LTAQGFADVRSERDLAGIERI 282 >gi|212636629|ref|YP_002313154.1| Modification methylase HemK [Shewanella piezotolerans WP3] gi|212558113|gb|ACJ30567.1| Modification methylase HemK [Shewanella piezotolerans WP3] Length = 280 Score = 269 bits (689), Expect = 3e-70, Method: Composition-based stats. Identities = 79/262 (30%), Positives = 129/262 (49%), Gaps = 8/262 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A+ D+ L + + P+ LD Q + + L+ I I+G R+F++ Sbjct: 23 AMLDAEVMLLHIINKPRSYLYTWPERDLDSAQVSEFKQMLAKRLRGNPIAHIVGEREFWS 82 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + ++ T PRP+TE+LV++AL + + R+LDLGTGTGA+ L+L E + Sbjct: 83 LPFRVNPTTLIPRPDTEILVETAL-----NLPLAENARVLDLGTGTGAIALSLAHERNEW 137 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181 + +D +A+ +A N V + E D QSDWF +VE F++IVSNPPYI+ Sbjct: 138 QVCAIDKVEEAVALAIENRVNLKL-EHVDVFQSDWFDAVECYDFNLIVSNPPYIDEEDEH 196 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P+ +L + G + IA+ +L G +E GY Q +++ Sbjct: 197 LSQGDVR-FEPQSALTAPLKGFADLFHIANCARDYLAPGGYLLLEHGYQQAIELREKLIE 255 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 V +D+G NDR + Sbjct: 256 LGFENVATVRDFGSNDRCTIGR 277 >gi|153002120|ref|YP_001367801.1| HemK family modification methylase [Shewanella baltica OS185] gi|151366738|gb|ABS09738.1| modification methylase, HemK family [Shewanella baltica OS185] Length = 282 Score = 269 bits (689), Expect = 3e-70, Method: Composition-based stats. Identities = 80/261 (30%), Positives = 126/261 (48%), Gaps = 8/261 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A D+ L S + P+ L Q + + K + I+G R+F++ Sbjct: 25 AHLDAEVLLLYCLNKSRSYLYTWPEKSLTVEQWKRFQQMVQKRQKGVPVAHIVGEREFWS 84 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + ++ T PRP+TE+LV++AL L ++LDLGTGTGA+ LAL E + Sbjct: 85 LPFIVNDTTLIPRPDTEILVETALNLPLSTY-----AKVLDLGTGTGAIALALASERESW 139 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181 + VD A+ +A +N + + D LQSDWFS+V+ FD+IVSNPPYI+ Sbjct: 140 QITAVDKVDDAVALAIANRENLKLP-QVDILQSDWFSAVKSRDFDLIVSNPPYIDETDEH 198 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P+ +L +G + IA+ +L +G +E G+ Q V + Sbjct: 199 LHQGDVR-FEPQSALTAAEEGFADLYYIANTARDYLKPNGYILLEHGFEQAVRLRAKLIE 257 Query: 242 RKLFLVNAFKDYGGNDRVLLF 262 V +D+G NDR + Sbjct: 258 LGYENVATVRDFGSNDRCTMG 278 >gi|153008372|ref|YP_001369587.1| HemK family modification methylase [Ochrobactrum anthropi ATCC 49188] gi|151560260|gb|ABS13758.1| modification methylase, HemK family [Ochrobactrum anthropi ATCC 49188] Length = 287 Score = 269 bits (689), Expect = 3e-70, Method: Composition-based stats. Identities = 105/259 (40%), Positives = 155/259 (59%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 D+ + TG + +I P+ ++D L++A+ R K E +HRI+G R+F+ + Sbjct: 24 LDARLLVEWATGKTRLDLISAPEQLVDSAVIETLSDALDRREKGEPVHRIMGVREFFGLP 83 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 LS+ T EPRP+TE+LV+ + +++ + +LD+GTGTGA+ ++LL G Sbjct: 84 FRLSAATLEPRPDTEVLVELVIPALEALAVQKNTLELLDMGTGTGAIIISLLHRFERTHG 143 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184 +G+D++ AL +A+ NAV NGV +RF L+SDWF +V G F +IVSNPPYI + L Sbjct: 144 IGLDMAEGALAMARINAVANGVGDRFAALKSDWFENVSGRFHLIVSNPPYIPHEDIAGLS 203 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 EVR+ DP +LDGG DGL+ YR +A + HL K G+ +VEIG Q DV +FES Sbjct: 204 REVREHDPLAALDGGSDGLNFYRALAQKAADHLYKQGMVAVEIGAGQFQDVEALFESAGF 263 Query: 245 FLVNAFKDYGGNDRVLLFC 263 L D GG+ R +LF Sbjct: 264 SLAGHASDLGGHRRAMLFA 282 >gi|222109994|ref|YP_002552258.1| type 12 methyltransferase [Acidovorax ebreus TPSY] gi|221729438|gb|ACM32258.1| Methyltransferase type 12 [Acidovorax ebreus TPSY] Length = 280 Score = 269 bits (689), Expect = 3e-70, Method: Composition-based stats. Identities = 79/257 (30%), Positives = 114/257 (44%), Gaps = 12/257 (4%) Query: 6 DSHSFLCRVTG---LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 D+ L V G ++ L R K E + +LG ++F+ Sbjct: 22 DAQMLLLHVLGRAPTDRAWLLAHDGDTLPAAAMEQYAALCARRAKGEPVAYLLGRKEFWG 81 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L++ + +PRP+TE LV AL + R R+ DLGTG+GA+ LAL E P Sbjct: 82 LPLSVDARVLDPRPDTETLVAWALEV----LATRAAPRVADLGTGSGAIALALQHERPDA 137 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182 + + VD S AL +A++NA G+ RF +Q +W V+G FD IVSNPPYI + Sbjct: 138 QVLAVDASADALAVARANAGQLGLPVRF--IQGNWLHGVDGSFDAIVSNPPYIAAQDPHL 195 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 +P +L G DGL RTI L G +E G++Q V + Sbjct: 196 ---AALTHEPLSALASGADGLEDIRTIVAQAPARLAPGGWLLLEHGWDQAEAVQALLRDA 252 Query: 243 KLFLVNAFKDYGGNDRV 259 V + D G R Sbjct: 253 GFDQVQSRHDLAGIARC 269 >gi|262375290|ref|ZP_06068523.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Acinetobacter lwoffii SH145] gi|262309544|gb|EEY90674.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Acinetobacter lwoffii SH145] Length = 272 Score = 269 bits (689), Expect = 3e-70, Method: Composition-based stats. Identities = 83/256 (32%), Positives = 122/256 (47%), Gaps = 10/256 (3%) Query: 9 SFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLS 68 L +T + S +++ D L Q + + R E + + G + F+ + L ++ Sbjct: 23 WLLEHITKIDSFDLLMKKDQELTPEQEQAYKDGLARIAAGEPLAYVTGSQPFWTLDLKVT 82 Query: 69 SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128 DT PRP+TE+LV++ L LP + R++DLGTGTGA+ L+L E + D Sbjct: 83 KDTLVPRPDTEVLVETVLKLDLP-----EDARVVDLGTGTGAIALSLASERSNWTVTASD 137 Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF-DVIVSNPPYIESVIVDCLGLEV 187 I LE+AK NA + + E + + W F D IVSNPPYI++ V L Sbjct: 138 IYEPTLEVAKYNAEQHDI-ENVEFVLGSWLKPFGRQFFDAIVSNPPYIDADDVHMQNLAT 196 Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLV 247 +P +L GL+ I +HL +G +E GYNQ V +F+ V Sbjct: 197 ---EPERALVADKKGLADIEMIILQAKKHLTVNGWVVLEHGYNQADAVQHLFKQAGYKQV 253 Query: 248 NAFKDYGGNDRVLLFC 263 KDYGGNDRV L Sbjct: 254 RTVKDYGGNDRVTLGQ 269 >gi|104780101|ref|YP_606599.1| methylase of polypeptide chain release factors [Pseudomonas entomophila L48] gi|95109088|emb|CAK13785.1| Methylase of polypeptide chain release factors [Pseudomonas entomophila L48] Length = 276 Score = 269 bits (688), Expect = 3e-70, Method: Composition-based stats. Identities = 80/249 (32%), Positives = 123/249 (49%), Gaps = 8/249 (3%) Query: 16 GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75 G S + P+ ++ + R E + ILG + F+ + L ++ T PR Sbjct: 32 GKSRSYLHTWPERIVSSEAAELFAGYLERRRAGEPVAYILGQQGFWKLDLEVAPHTLIPR 91 Query: 76 PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135 P+TELLV++AL + R+LDLGTGTGA+ LAL E P ++ VD +A+ Sbjct: 92 PDTELLVETALE-----LVPAKPARVLDLGTGTGAIALALASECPAWQVTAVDRIEEAVA 146 Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194 +A+ N G+ S W+ ++EG FD+I+SNPPYI + + +VR F+P Sbjct: 147 LAERNRQRLGLG-NVQVRASHWYDALEGEHFDLILSNPPYIRAADPHLVAGDVR-FEPSS 204 Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYG 254 +L G DGL R I +HL G +E GY+Q V + + V + D G Sbjct: 205 ALVAGEDGLDDLRVIVAQAPQHLLPGGWLLLEHGYDQAPAVRELLSAGGFVDVASRVDLG 264 Query: 255 GNDRVLLFC 263 G++R+ L Sbjct: 265 GHERISLGR 273 >gi|319789798|ref|YP_004151431.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Thermovibrio ammonificans HB-1] gi|317114300|gb|ADU96790.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Thermovibrio ammonificans HB-1] Length = 283 Score = 269 bits (688), Expect = 3e-70, Method: Composition-based stats. Identities = 79/264 (29%), Positives = 124/264 (46%), Gaps = 9/264 (3%) Query: 3 ALRDSHSFLCRVTGLS-SHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 D+ L GL ++ D L D + IVR K E + I G ++FY Sbjct: 24 PRLDAELLLVHSLGLKGRVELYTQFDRPLTDDEVERYRQLIVRRAKGEPVAYITGKKEFY 83 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 + PRPETELLVD AL++ ++ + ++D+GTG+G V L L K Sbjct: 84 GFEFLVDRGVLVPRPETELLVDVALSY----LKGKQGKTVVDVGTGSGCVILTLCKLLGD 139 Query: 122 F-KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180 + GVD+S KALE+A+ N G S L+S+ +V+ D +V+N PY+ Sbjct: 140 ANRYYGVDLSPKALEVAEKNRERLGCS--VTFLRSNLLEAVDFPVDAVVANLPYVPVGDK 197 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 L V ++P ++L GG DGL + +N G ++E+G Q V + E Sbjct: 198 -RLHKWVLKYEPAMALFGGKDGLELIERLIVQAKEKINPKGFIALEVGEGQADRVKSLLE 256 Query: 241 SRKLFLVNAFKDYGGNDRVLLFCR 264 + V +F+D G +RV++ + Sbjct: 257 TAGFLNVKSFRDLSGIERVVVGEK 280 >gi|261867617|ref|YP_003255539.1| protein-(glutamine-N5) methyltransferase [Aggregatibacter actinomycetemcomitans D11S-1] gi|261412949|gb|ACX82320.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Aggregatibacter actinomycetemcomitans D11S-1] Length = 299 Score = 269 bits (688), Expect = 3e-70, Method: Composition-based stats. Identities = 89/273 (32%), Positives = 142/273 (52%), Gaps = 21/273 (7%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L VT S ++ ++ LD++ LT + R L+ E I ILG ++F+++ L Sbjct: 26 DAQVLLQFVTQKSRAFILAFGETALDEKTLEKLTALLARRLQGEPIAYILGEKEFWSLPL 85 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEK----RDVVRILDLGTGTG-----------A 110 +S+ T PRP+TE+LV+ A+A ++ +++K RILDLGTGTG Sbjct: 86 NVSAGTLIPRPDTEILVEKAVAIAIEKLQKCGQNSQRFRILDLGTGTGAIALALASALKP 145 Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170 + K + +GVD++ + + +AKSN N + +QS WF +V G FD+I+S Sbjct: 146 IA---QKHTVQLDIIGVDLTPEVVALAKSNGEKNQL--NVAFVQSCWFENVTGTFDLILS 200 Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230 NPPYI++ +VR F+P +L +G + R I + + ++G VE G+ Sbjct: 201 NPPYIDAHDEHLTQGDVR-FEPLSALVAAEEGYADLRHIIANAPKFMRENGYLLVEHGWQ 259 Query: 231 QKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFC 263 Q V IF+ V +DYG N+RV L C Sbjct: 260 QGEKVRSIFQENFWSAVETLRDYGNNERVTLGC 292 >gi|260220344|emb|CBA27787.1| Protein hemK homolog [Curvibacter putative symbiont of Hydra magnipapillata] Length = 292 Score = 269 bits (688), Expect = 3e-70, Method: Composition-based stats. Identities = 86/257 (33%), Positives = 120/257 (46%), Gaps = 12/257 (4%) Query: 6 DSHSFLCRVTGLSSH---QVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 DS L G + ++ +L ++ LT R L E + ++G ++FY Sbjct: 35 DSRLLLLHAVGQARAGRAWLLAHDSDLLSEQALITLTRLANRRLAGEPVAYLVGHKEFYG 94 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +S+D PRP+TE LV+ AL +E R++DLGTG+GA+ LAL P Sbjct: 95 LNLQVSADVLVPRPDTETLVEWALE----TLEPTPHARVVDLGTGSGAIALALKATRPEL 150 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182 + VD S AL +A+ NA G+ F Q W S EG F +IVSNPPYI Sbjct: 151 QVEAVDFSHAALAVAQGNAQRLGLEVAFG--QGSWLGSAEGKFQLIVSNPPYIREDDEHL 208 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 F+PR +L G DGL RTI HL G E GY+Q DV + + Sbjct: 209 P---ALRFEPRQALTAGTDGLDDIRTIIRQAPEHLLAGGWLLFEHGYDQAGDVRGLLAAA 265 Query: 243 KLFLVNAFKDYGGNDRV 259 V + +D G +R Sbjct: 266 GFSEVQSRRDLAGIERC 282 >gi|167031790|ref|YP_001667021.1| protein-(glutamine-N5) methyltransferase [Pseudomonas putida GB-1] gi|166858278|gb|ABY96685.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Pseudomonas putida GB-1] Length = 276 Score = 269 bits (688), Expect = 3e-70, Method: Composition-based stats. Identities = 81/249 (32%), Positives = 123/249 (49%), Gaps = 8/249 (3%) Query: 16 GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75 G S + P+ ++ + R E + ILG + F+ + L ++ T PR Sbjct: 32 GKSRSYLHTWPERIVSSEDAETYAGYLQRRRGGEPVAYILGQQGFWKIDLEVAPHTLIPR 91 Query: 76 PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135 P+TELLV++AL ++ ++LDLGTGTGA+ LAL + P ++ VD +A Sbjct: 92 PDTELLVETALE-----LQPAAPAKVLDLGTGTGAIALALASDRPAWQVTAVDRVEEAAA 146 Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194 +A+ N G+ + S WF S+ G FD+IVSNPPYI + + +VR F+P Sbjct: 147 LAERNRQRLGL-DNAQVRVSHWFDSLAGERFDLIVSNPPYIAAEDPHLVAGDVR-FEPSS 204 Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYG 254 +L G DGL R IA HL G +E GY+Q V + + V + D G Sbjct: 205 ALVAGADGLDDLRVIAAQAPAHLLPGGWLLLEHGYDQAAAVRALLAEQGFVEVASRTDLG 264 Query: 255 GNDRVLLFC 263 G++R+ L Sbjct: 265 GHERITLGR 273 >gi|300025030|ref|YP_003757641.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Hyphomicrobium denitrificans ATCC 51888] gi|299526851|gb|ADJ25320.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Hyphomicrobium denitrificans ATCC 51888] Length = 295 Score = 269 bits (688), Expect = 3e-70, Method: Composition-based stats. Identities = 94/258 (36%), Positives = 137/258 (53%), Gaps = 2/258 (0%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A RD+ L + G+ ++ P+ L D+ + +A+ R L HE + RILG R+FY Sbjct: 34 APRDARLLLQGLLGIDGTALLTRPEQPLGDKA-ALIGDAVRRRLAHEPVTRILGVREFYG 92 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 ++ D +PRP+TE +V+ AL ++I D+GTG+G + LL E P Sbjct: 93 REFIVTPDVLDPRPDTETVVELALEIVRANGLTSAPLQIADIGTGSGILIATLLLELPNA 152 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182 +GV DIS AL +A+ NA G+++R + + G FD+IVSNPPYI + Sbjct: 153 RGVATDISTAALAVAERNAKRLGLADRTSFVATHSLDGCAGPFDLIVSNPPYIREADIPG 212 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 L EVRD+DP+++LDGG DGL YR IA L +E+G Q DV IF + Sbjct: 213 LEPEVRDYDPQLALDGGADGLDVYREIAKVARNPLRPM-RLVLEVGAGQASDVTDIFRAA 271 Query: 243 KLFLVNAFKDYGGNDRVL 260 + KD GG+DR + Sbjct: 272 GWRPLGRQKDLGGHDRAV 289 >gi|262279541|ref|ZP_06057326.1| methyl transferase [Acinetobacter calcoaceticus RUH2202] gi|262259892|gb|EEY78625.1| methyl transferase [Acinetobacter calcoaceticus RUH2202] Length = 270 Score = 269 bits (688), Expect = 3e-70, Method: Composition-based stats. Identities = 81/255 (31%), Positives = 124/255 (48%), Gaps = 10/255 (3%) Query: 9 SFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLS 68 L ++S ++ + L +Q + R E + + G + F+ + L ++ Sbjct: 23 WLLEHFLKINSLELKFRLEQELTTQQEQDYLAGLERIQNGEPLAYVTGSQPFWTLDLKVT 82 Query: 69 SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128 SDT PRP+TE+LV++ L+ +LP+ I+DLGTGTGA+ LAL E P ++ D Sbjct: 83 SDTLVPRPDTEVLVETVLSLNLPK-----NANIVDLGTGTGAIALALASEHPDWQVTATD 137 Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEV 187 I LE+AK NA T+G+ + WF +++ FD+IVSNPPYI+ + Sbjct: 138 IYAPTLEVAKENAQTHGLQ-QVKFACGAWFDALDKQQFDLIVSNPPYIDPEDEHM---QA 193 Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLV 247 +PR +L GL+ I L G ++E GY+Q V IF + Sbjct: 194 LATEPRRALVADHKGLADIEIIIAQGKNWLKPQGWIALEHGYDQGHAVRNIFAEHGFSQI 253 Query: 248 NAFKDYGGNDRVLLF 262 +DYG NDRV L Sbjct: 254 KTIQDYGQNDRVTLA 268 >gi|149204049|ref|ZP_01881017.1| Putative methylase [Roseovarius sp. TM1035] gi|149142491|gb|EDM30536.1| Putative methylase [Roseovarius sp. TM1035] Length = 285 Score = 269 bits (688), Expect = 3e-70, Method: Composition-based stats. Identities = 96/258 (37%), Positives = 134/258 (51%), Gaps = 7/258 (2%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A D+ + L GL+ ++ + LD I R E + +ILG R F+ Sbjct: 22 AAGDARALLAGAVGLARDRLTLHLGEDLDAAALARFEAMIARRAAREPVAKILGRRVFWG 81 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 +++D +PRPETE L+ ALA + +LDLGTG+G + + LL E P Sbjct: 82 REFEVTADVLDPRPETECLIFEALA-------GPKPLTLLDLGTGSGILAVTLLAEWPDA 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182 GV D+S AL++A NA +GV+ R +SDWF+ V G+FD+IVSNPPYI + + Sbjct: 135 GGVATDVSDAALDVATRNAARHGVAGRLTLSRSDWFARVAGVFDLIVSNPPYIAAAEMAG 194 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 L EVR+ DPR +L DGL+ YR IA G HL+ G VEIG+ Q V + + Sbjct: 195 LMPEVREHDPRGALTDEADGLTAYRAIAAGAGAHLSPGGRLMVEIGWKQGPAVADLLCAE 254 Query: 243 KLFLVNAFKDYGGNDRVL 260 V D G DRV+ Sbjct: 255 GFDAVTIRPDLEGRDRVV 272 >gi|326790731|ref|YP_004308552.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Clostridium lentocellum DSM 5427] gi|326541495|gb|ADZ83354.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Clostridium lentocellum DSM 5427] Length = 290 Score = 269 bits (688), Expect = 3e-70, Method: Composition-based stats. Identities = 74/264 (28%), Positives = 126/264 (47%), Gaps = 6/264 (2%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 + D+ + V + Q++++ LD+ + + I + + ++ G ++F Sbjct: 27 DSAIDAKLLMKYVLAFNETQLLLERQKRLDEGMQQIYKSLIEKRSSGIPLQQLTGTQEFM 86 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 + ++ PR +TE L++ L + + R +D+GTG+G + + L Sbjct: 87 GLEFQVNEHVLIPRQDTETLIEELLEQN----KNFSFKRGIDIGTGSGCISITLAYYIKE 142 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVI 179 +DIS +AL++A+ N + + +R TL+SD + E D+IVSNPPYI Sbjct: 143 LTMCAIDISEEALKVARHNIQKHDLEKRIYTLKSDVLENYAEEEKVDLIVSNPPYISKEE 202 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 V+ L +EV +PR +L DGLS Y+ I+ +L K G+ + EIGYNQ V I Sbjct: 203 VETLMIEVIGHEPREALTDEGDGLSFYKRISKAAKSYLKKGGVIAYEIGYNQGKAVTTIL 262 Query: 240 ESRKLFLVNAFKDYGGNDRVLLFC 263 + V D GNDRV+ Sbjct: 263 KEEGYSDVKLLPDLSGNDRVITAR 286 >gi|239999900|ref|ZP_04719824.1| HemK [Neisseria gonorrhoeae 35/02] Length = 273 Score = 269 bits (688), Expect = 3e-70, Method: Composition-based stats. Identities = 87/260 (33%), Positives = 122/260 (46%), Gaps = 12/260 (4%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 ++ L V+ + Q++ + D R R L E + ILG R+FY R Sbjct: 16 EARMLLQYVSEYTRVQLLTRGGEEMPDEIRQRADRLAQRRLNGEPVAYILGVREFYGRRF 75 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 T++ + PRPETE LV++ LA + R+ DLGTG+GAV + + E P Sbjct: 76 TVNPNVLIPRPETEHLVEAVLARL------PENGRVWDLGTGSGAVAVTVALERPDAFVR 129 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS---SVEGLFDVIVSNPPYIESVIVDC 182 DIS ALE A+ NA G R + WF E +D+IVSNPPYIE+ Sbjct: 130 ASDISTPALETARKNAADLGA--RVEFAHGSWFDTDMPSERQWDIIVSNPPYIENGDKHL 187 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 ++R F+P+I+L DGLS RT+A G L + G +E G++Q V + Sbjct: 188 SQGDLR-FEPQIALTDFSDGLSCIRTLAQGAPDRLAEGGFLLLEHGFDQGAAVRGVLAEN 246 Query: 243 KLFLVNAFKDYGGNDRVLLF 262 V D G DRV L Sbjct: 247 GFSGVEILPDLVGLDRVTLG 266 >gi|213617487|ref|ZP_03372313.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] Length = 262 Score = 269 bits (688), Expect = 3e-70, Method: Composition-based stats. Identities = 85/250 (34%), Positives = 121/250 (48%), Gaps = 8/250 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 RD+ L VTG ++ ++ L D Q+ L + R + E I + G R+F++ Sbjct: 20 PRRDAEILLEYVTGKRRTYIMAFGETPLTDVQQQQLAELLQRRKQGEPIAYLTGLREFWS 79 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +S T PRP+TE LV+ ALA RILDLGTGTGA+ LAL E P Sbjct: 80 LPLFVSPATLIPRPDTECLVEQALARL-----PVKTCRILDLGTGTGAIALALACERPDC 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181 + VD A+ +A NA + LQS WFS++ G FD+IVSNPPYI++ Sbjct: 135 EVTAVDRMPDAVALAIRNAEHLAIR-NVRILQSCWFSALSGQQFDMIVSNPPYIDAQDPH 193 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+PR +L +G++ I D + L G +E G+ Q V F Sbjct: 194 LSEGDVR-FEPRSALVADENGMADLTHIIDNARQMLTPGGFLLLEHGWRQGEAVRAAFRR 252 Query: 242 RKLFLVNAFK 251 V + Sbjct: 253 SGYTDVETCR 262 >gi|331266423|ref|YP_004326053.1| protoporphyrinogen oxidase [Streptococcus oralis Uo5] gi|326683095|emb|CBZ00713.1| protoporphyrinogen oxidase [Streptococcus oralis Uo5] Length = 278 Score = 269 bits (688), Expect = 3e-70, Method: Composition-based stats. Identities = 78/247 (31%), Positives = 120/247 (48%), Gaps = 8/247 (3%) Query: 16 GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75 LS + + + + F+ + H+ I+G DF+ ++L + PR Sbjct: 33 NLSFTDFVFALQQEVTEEENQFVEEIYQQLAAHKPAQYIIGQADFFGMQLKVDERVLIPR 92 Query: 76 PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135 PET+ LV+ LA + ++ ++ILD+GTG+GA+ L L K P + DIS ALE Sbjct: 93 PETKELVELILAEN-----AKESLKILDIGTGSGAIALGLAKNRPDWSVTAADISQDALE 147 Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195 +A NA + +SD F+ + +D+IVSNPPYI +GL V +P ++ Sbjct: 148 LASENARNQNL--NIFFKKSDCFAEISEKYDIIVSNPPYISREDESEVGLNVLHSEPHLA 205 Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDYG 254 L DGL+ YR IA+ +L G +EIGY Q V +F V KD Sbjct: 206 LFADEDGLAIYRRIAEDAKDYLTDGGKIYLEIGYKQGQSVPDLFRKNLPEKRVRTLKDQF 265 Query: 255 GNDRVLL 261 G DR+++ Sbjct: 266 GQDRMVV 272 >gi|302334926|ref|YP_003800133.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Olsenella uli DSM 7084] gi|301318766|gb|ADK67253.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Olsenella uli DSM 7084] Length = 524 Score = 269 bits (688), Expect = 3e-70, Method: Composition-based stats. Identities = 80/263 (30%), Positives = 122/263 (46%), Gaps = 5/263 (1%) Query: 7 SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66 + L VTGLS Q+ D L + + +A+VR E + + G F ++ L Sbjct: 33 AEWMLSNVTGLSRVQLYTSFDRPLSADELARMHDAVVRRGAGEPLQYVTGEMPFRHIVLH 92 Query: 67 LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126 PRPETE+LVD+ LA ++L++GTGTG + ++ E P V Sbjct: 93 CEGGVLIPRPETEVLVDAVLAHVDVAAAAGHDAQVLEVGTGTGCIACSIASERPGSHVVA 152 Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFS----SVEGLFDVIVSNPPYIESVIVDC 182 D+S A +A N G++ D + D S +++G FDV+VSNPPYI S +V Sbjct: 153 TDLSPAAAALAMRNRDALGLARAVDVITCDLASGVDPALKGTFDVLVSNPPYIPSDVVPT 212 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 L EV F+P ++LDGG DGL +R + + L G+ + E+ + + Sbjct: 213 LPREVVGFEPHLALDGGADGLDVFRRLLEVAPDMLRPGGMLACELFETNAEVAAELCRRQ 272 Query: 243 -KLFLVNAFKDYGGNDRVLLFCR 264 V +D RVL+ R Sbjct: 273 GGWARVEVREDLTHRPRVLVAVR 295 >gi|171319080|ref|ZP_02908204.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Burkholderia ambifaria MEX-5] gi|171095719|gb|EDT40675.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Burkholderia ambifaria MEX-5] Length = 280 Score = 269 bits (688), Expect = 3e-70, Method: Composition-based stats. Identities = 85/265 (32%), Positives = 129/265 (48%), Gaps = 11/265 (4%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L G + Q+I D+ L+ R + E + +++G R+F+ Sbjct: 19 DARVLLAHAFGWTRTQLITRGDAPLEPASIERYRALEARRVAGEPVAQLVGMREFFGRPF 78 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 ++ D PRPETELLV++AL I+ R +LDLGTG+GA+ +++ E P + Sbjct: 79 DVTPDVLIPRPETELLVEAALD----AIDGRPHPAVLDLGTGSGAIAVSIAAERPDARVW 134 Query: 126 GVDISCKALEIAKSNAVTNGVSER----FDTLQSDWFSSVEG--LFDVIVSNPPYIESVI 179 +D S AL++A+ NA + R LQSDW+++++ FD IVSNPPYI Sbjct: 135 ALDRSPAALDVARRNADKLLDARRPGGALHWLQSDWYAALDPALAFDTIVSNPPYIAQHD 194 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 ++R F+PR +L DGLS RTI G +L G +E GY+Q V + Sbjct: 195 PHLAQGDLR-FEPRGALTDDADGLSAIRTIVAGAGAYLKPGGTLWIEHGYDQAEAVRALL 253 Query: 240 ESRKLFLVNAFKDYGGNDRVLLFCR 264 SR V + D +R R Sbjct: 254 VSRGFVAVESLADLAAIERTTGGRR 278 >gi|288905237|ref|YP_003430459.1| methyltransferase [Streptococcus gallolyticus UCN34] gi|306831308|ref|ZP_07464468.1| protein-(glutamine-N5) methyltransferase [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|325978213|ref|YP_004287929.1| methyltransferase [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|288731963|emb|CBI13528.1| putative methyltransferase [Streptococcus gallolyticus UCN34] gi|304426544|gb|EFM29656.1| protein-(glutamine-N5) methyltransferase [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|325178141|emb|CBZ48185.1| methyltransferase [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 276 Score = 269 bits (688), Expect = 4e-70, Method: Composition-based stats. Identities = 80/248 (32%), Positives = 125/248 (50%), Gaps = 8/248 (3%) Query: 16 GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75 G + I+ + + ++ + L + + +H S I G F ++ L++ PR Sbjct: 33 GWTLLDFILHQNQAITEKDQMLLEQIMAQLTEHRSPQYITGKAYFRDLELSVDERVLIPR 92 Query: 76 PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135 PETE LVD L + R +R+LD+GTG+GA+ ++L P ++ DIS AL+ Sbjct: 93 PETEELVDLVLKEN-----SRADLRVLDIGTGSGAIAISLKAARPNWQVTASDISADALQ 147 Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195 +AK NA+ N V +QSD FS + FD+I+SNPPYI D +G+ V +P ++ Sbjct: 148 LAKENALKNQVE--LTLIQSDVFSQITERFDMIISNPPYIAYDDEDEVGINVLASEPHLA 205 Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDYG 254 L DG + YR I + S HL ++G EIGY Q + + V KD Sbjct: 206 LFADEDGFAIYRQIIENASEHLTENGKLYFEIGYKQGEGLRALLSKHFPAKRVRVIKDMF 265 Query: 255 GNDRVLLF 262 G DR+++ Sbjct: 266 GKDRMVVM 273 >gi|319787973|ref|YP_004147448.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Pseudoxanthomonas suwonensis 11-1] gi|317466485|gb|ADV28217.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Pseudoxanthomonas suwonensis 11-1] Length = 279 Score = 268 bits (687), Expect = 4e-70, Method: Composition-based stats. Identities = 83/263 (31%), Positives = 116/263 (44%), Gaps = 7/263 (2%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 D+ L + D +D + + R L E + + G R F+ Sbjct: 21 PREDAEPLLLHALQQDRAWLFAHGDDPVDPAKAEAYRALLGRRLAGEPVAYLTGHRGFWT 80 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L + +T PRPETELLV+ AL R+ + VR+ DLGTGTGA+ LA+ E P Sbjct: 81 LDLETTPETLIPRPETELLVELALG----RLPVDEPVRVADLGTGTGAIALAIASERPLA 136 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVD 181 V D++ L +A NA NGV + DW ++ FD++ SNPPYI Sbjct: 137 AVVATDVAKATLAVAVRNAQANGVG-NVWFRRGDWCQALGRDRFDLVASNPPYIAEGDRH 195 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 ++R +P +L G DGL RTI HL G +E GY+Q V + E Sbjct: 196 LSEGDLR-HEPARALSSGADGLDAIRTIVATAPDHLVPGGWLLLEHGYDQGAAVRALLEQ 254 Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264 V +D DRV L R Sbjct: 255 AGFVEVATAQDLEQRDRVSLGRR 277 >gi|206558778|ref|YP_002229538.1| protein methyltransferase HemK [Burkholderia cenocepacia J2315] gi|198034815|emb|CAR50683.1| protein methyltransferase HemK [Burkholderia cenocepacia J2315] Length = 280 Score = 268 bits (687), Expect = 4e-70, Method: Composition-based stats. Identities = 85/261 (32%), Positives = 126/261 (48%), Gaps = 11/261 (4%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L G + Q+I D+ LD R + E + +++G R+F+ Sbjct: 19 DARVLLAHALGWTRTQLITRGDAPLDAAAVERYRALEARRVAGEPVAQLVGMREFFGRPF 78 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 ++ D PRPETELLV++AL I+ +LDLGTG+GA+ +++ E P + Sbjct: 79 DVTPDVLIPRPETELLVEAALD----AIDGLPHAAVLDLGTGSGAIAVSIAAERPDARVW 134 Query: 126 GVDISCKALEIAKSNAVTNGVSER----FDTLQSDWFSSVEG--LFDVIVSNPPYIESVI 179 +D S AL +A+ NA ++R LQSDW+++++ FD IVSNPPYI Sbjct: 135 ALDRSPAALAVAQRNADKLLDAQRPGGPLHWLQSDWYAALDPALAFDAIVSNPPYIAQHD 194 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 ++R F+PR +L DGLS RTI G HL G +E GY+Q V I Sbjct: 195 PHLAQGDLR-FEPRGALTDDADGLSAIRTIVAGAGAHLKPGGTLWIEHGYDQAEAVRAIL 253 Query: 240 ESRKLFLVNAFKDYGGNDRVL 260 S V + D +R Sbjct: 254 VSHGFVAVESLTDLAAIERTT 274 >gi|330941683|gb|EGH44458.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Pseudomonas syringae pv. pisi str. 1704B] Length = 277 Score = 268 bits (687), Expect = 4e-70, Method: Composition-based stats. Identities = 79/250 (31%), Positives = 122/250 (48%), Gaps = 7/250 (2%) Query: 16 GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75 G + P+ ++ + R K E + ILG + F+ + L ++ T PR Sbjct: 32 GKPRSFLHTWPERIVSTEAAVAFAGYMERRRKGEPVAYILGQQGFWKLDLEVAPHTLIPR 91 Query: 76 PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135 PETE LV++AL + ++LDLGTGTGA+ LAL E +K VD +A+ Sbjct: 92 PETEKLVEAALEL----VPAFAPAQVLDLGTGTGAIALALANERQQWKVTAVDRVPEAVA 147 Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194 +A+ N + + +S W S ++G FD+I+SNPPYI +VR F+P Sbjct: 148 LAERNRQRLQL-NNAEVFESHWLSGLQGRQFDLIISNPPYISDADPHLSAGDVR-FEPSS 205 Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYG 254 +L G DGL RTI + HLN DG +E GY+Q V + + + +D G Sbjct: 206 ALVAGSDGLDDLRTIIEQAPAHLNVDGWLLLEHGYDQGPAVRELLIRQGFERIQTRRDLG 265 Query: 255 GNDRVLLFCR 264 ++R+ C+ Sbjct: 266 EHERITFGCK 275 >gi|299769518|ref|YP_003731544.1| methylase of polypeptide chain release factor [Acinetobacter sp. DR1] gi|298699606|gb|ADI90171.1| methylase of polypeptide chain release factor [Acinetobacter sp. DR1] Length = 271 Score = 268 bits (687), Expect = 5e-70, Method: Composition-based stats. Identities = 82/256 (32%), Positives = 122/256 (47%), Gaps = 10/256 (3%) Query: 9 SFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLS 68 L ++S ++ + L +Q + R E + + G + F+ + L ++ Sbjct: 23 WLLEHFLKINSLELKFRLEQELTAQQEQDYLAGLERIQNGEPLAYVTGSQPFWTLDLKVT 82 Query: 69 SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128 SDT PRP+TE+LV++ L +LP + I+DLGTGTGA+ LAL E P + D Sbjct: 83 SDTLVPRPDTEILVETVLNLTLP-----NTANIVDLGTGTGAIALALASERPDWFVTATD 137 Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEV 187 I LE+AK NA+ + + R WF ++E FD+IVSNPPYI+ + Sbjct: 138 IYAPTLEVAKENALAHNLQ-RVKFACGAWFEALEPQKFDLIVSNPPYIDPEDEHM---QA 193 Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLV 247 +PR +L GL+ I L G ++E GY+Q V IF + Sbjct: 194 LATEPRRALVADHQGLADIEIIIAQGKNWLKPQGWIALEHGYDQGQAVRNIFAEHGFSEI 253 Query: 248 NAFKDYGGNDRVLLFC 263 +DYG NDRV L C Sbjct: 254 KTIQDYGQNDRVTLAC 269 >gi|226940812|ref|YP_002795886.1| HemK1 [Laribacter hongkongensis HLHK9] gi|226715739|gb|ACO74877.1| HemK1 [Laribacter hongkongensis HLHK9] Length = 276 Score = 268 bits (687), Expect = 5e-70, Method: Composition-based stats. Identities = 83/262 (31%), Positives = 125/262 (47%), Gaps = 11/262 (4%) Query: 4 LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63 D+H L + +GLS + I P+ + + R L E + +LG R+F+ Sbjct: 17 RLDAHLLLEQASGLSRTRQITWPEQEVPEETAQRFLALAARRLAGEPVAYLLGVREFFGR 76 Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 ++ DT PRPETE LV+ AL R+LDLGTG+GA+ + + E P + Sbjct: 77 DFRVTPDTLIPRPETEHLVEFALTHL------PPAGRMLDLGTGSGAIAVTVACERPDAR 130 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVD 181 +D+S AL +A+SN R L+SDWFS++ E F++IVSNPPYI + Sbjct: 131 VTALDVSAAALAVARSNGQHLQAQVR--WLESDWFSALPAEERFELIVSNPPYIAAGDPH 188 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 ++R F+P +L DGL + +A + G +VE GY+Q +F Sbjct: 189 LEQGDLR-FEPASALTDFADGLEALQVLATQACHFVTPGGWLAVEHGYDQGKACRALFAG 247 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 V+ D G DRV + Sbjct: 248 AGWLSVSTLPDLAGLDRVTVGQ 269 >gi|270292698|ref|ZP_06198909.1| N5 glutamine methyltransferase, release factor-specific protein [Streptococcus sp. M143] gi|270278677|gb|EFA24523.1| N5 glutamine methyltransferase, release factor-specific protein [Streptococcus sp. M143] Length = 278 Score = 268 bits (687), Expect = 5e-70, Method: Composition-based stats. Identities = 79/247 (31%), Positives = 122/247 (49%), Gaps = 8/247 (3%) Query: 16 GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75 LS + + + ++ F+ + H+ I+G DF+ ++L + PR Sbjct: 33 NLSFTDFVFALQQEVTEEEKQFVEEIFQQLAAHKPAQYIIGQADFFGMQLKVDERVLIPR 92 Query: 76 PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135 PETE LV+ LA + + +++LD+GTG+GA+ LAL K P + VDIS AL+ Sbjct: 93 PETEELVELILAEN-----SDENLKVLDIGTGSGAIALALAKNRPDWSVTAVDISQDALD 147 Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195 +A NA + + +SD F+ + +D+IVSNPPYI +GL V +P ++ Sbjct: 148 LATENAK--VQNFQIFFKKSDCFAEISEKYDIIVSNPPYISREDESEVGLNVLHSEPHLA 205 Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDYG 254 L DGL+ YR IA+ L G +EIGY Q V +F V KD Sbjct: 206 LFADEDGLAIYRRIAEDAKDFLTDGGKIYLEIGYKQGQSVPALFRKHLPEKRVRTLKDQF 265 Query: 255 GNDRVLL 261 G DR+++ Sbjct: 266 GQDRMVV 272 >gi|148546008|ref|YP_001266110.1| HemK family modification methylase [Pseudomonas putida F1] gi|148510066|gb|ABQ76926.1| modification methylase, HemK family [Pseudomonas putida F1] Length = 276 Score = 268 bits (686), Expect = 5e-70, Method: Composition-based stats. Identities = 82/249 (32%), Positives = 122/249 (48%), Gaps = 8/249 (3%) Query: 16 GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75 G S + P+ ++ + R E + ILG + F+ + L ++ T PR Sbjct: 32 GKSRSYLHTWPERIVSSEDAETYAGYLQRRRGGEPVAYILGLQGFWKIDLEVAPHTLIPR 91 Query: 76 PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135 P+TELLV++AL ++ ++LDLGTGTGA+ LAL E P ++ VD +A Sbjct: 92 PDTELLVETALE-----LQPASPAKVLDLGTGTGAIALALASERPAWQVTAVDRVEEAAA 146 Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194 +A+ N G++ S WF S+ G FD+IVSNPPYI + + +VR F+P Sbjct: 147 LAERNRQRLGLA-NARVRLSHWFDSLAGERFDLIVSNPPYIAAEDPHLVAGDVR-FEPSS 204 Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYG 254 +L G DGL R IA HL G +E GY+Q V + V + D G Sbjct: 205 ALVAGADGLDDLRVIAAQAPAHLLPGGWLLLEHGYDQAAAVRALLAEHGFIEVASRTDLG 264 Query: 255 GNDRVLLFC 263 G++R+ L Sbjct: 265 GHERITLGR 273 >gi|107024141|ref|YP_622468.1| HemK family modification methylase [Burkholderia cenocepacia AU 1054] gi|116688533|ref|YP_834156.1| HemK family modification methylase [Burkholderia cenocepacia HI2424] gi|105894330|gb|ABF77495.1| [protein release factor]-glutamine N5-methyltransferase [Burkholderia cenocepacia AU 1054] gi|116646622|gb|ABK07263.1| [protein release factor]-glutamine N5-methyltransferase [Burkholderia cenocepacia HI2424] Length = 280 Score = 268 bits (686), Expect = 5e-70, Method: Composition-based stats. Identities = 83/261 (31%), Positives = 124/261 (47%), Gaps = 11/261 (4%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L G + Q+I D+ LD R + E + +++G R+F+ Sbjct: 19 DARVLLAHALGWTRTQLITRGDAPLDAAAVERYRALEARRVAGEPVAQLVGMREFFGRPF 78 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 ++ D PRPETELLV++AL I+ +LDLGTG+GA+ +++ E P + Sbjct: 79 DVTPDVLIPRPETELLVEAALD----AIDGLPHAAVLDLGTGSGAIAVSIAAERPDARVW 134 Query: 126 GVDISCKALEIAKSNAVTNGVSER----FDTLQSDWFSSVEGL--FDVIVSNPPYIESVI 179 +D S AL +A+ NA + R LQSDW+++++ FD IVSNPPYI Sbjct: 135 ALDRSPAALAVAQRNADKLLDAHRPGGPLHWLQSDWYAALDPALGFDAIVSNPPYIAQHD 194 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 ++R F+PR +L DGLS R I G +L G +E GY+Q V I Sbjct: 195 PHLAQGDLR-FEPRGALTDDADGLSAIRAIVAGAGAYLKPGGTLWIEHGYDQAEAVRAIL 253 Query: 240 ESRKLFLVNAFKDYGGNDRVL 260 S V + D +R Sbjct: 254 ASHGFVAVESLADLAAIERTT 274 >gi|313497100|gb|ADR58466.1| HemK family modification methylase [Pseudomonas putida BIRD-1] Length = 276 Score = 268 bits (686), Expect = 5e-70, Method: Composition-based stats. Identities = 82/249 (32%), Positives = 122/249 (48%), Gaps = 8/249 (3%) Query: 16 GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75 G S + P+ ++ + R E + ILG + F+ + L ++ T PR Sbjct: 32 GKSRSYLHTWPERIVSSEDAETYAGYLKRRRGGEPVAYILGLQGFWKIDLEVAPHTLIPR 91 Query: 76 PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135 P+TELLV++AL ++ ++LDLGTGTGA+ LAL E P ++ VD +A Sbjct: 92 PDTELLVETALE-----LQPASPAKVLDLGTGTGAIALALASERPAWQVTAVDRVEEAAA 146 Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194 +A+ N G++ S WF S+ G FD+IVSNPPYI + + +VR F+P Sbjct: 147 LAERNRQRLGLA-NARVRLSHWFDSLAGERFDLIVSNPPYIAAEDPHLVAGDVR-FEPSS 204 Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYG 254 +L G DGL R IA HL G +E GY+Q V + V + D G Sbjct: 205 ALVAGADGLDDLRVIAAQAPAHLLPGGWLLLEHGYDQAAAVRALLAEHGFIEVASRTDLG 264 Query: 255 GNDRVLLFC 263 G++R+ L Sbjct: 265 GHERITLGR 273 >gi|302392965|ref|YP_003828785.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Acetohalobium arabaticum DSM 5501] gi|302205042|gb|ADL13720.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Acetohalobium arabaticum DSM 5501] Length = 307 Score = 268 bits (686), Expect = 6e-70, Method: Composition-based stats. Identities = 73/269 (27%), Positives = 130/269 (48%), Gaps = 8/269 (2%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A D+ L + + ++ V+ D L + + +++ K + I+G+++F + Sbjct: 26 ARLDAEVLLADLLDMERIKLYVNFDRPLTEVEINQYRQRVIQRAKRMPVAYIIGYQEFMS 85 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 ++ ++ D PRPETE LV++ + +KR+ + ++DL TG+GA+ ++L KE Sbjct: 86 LKFKVNEDVLIPRPETEHLVEAVIQRVNKLADKREKLTVIDLCTGSGAIIISLAKELADV 145 Query: 123 ----KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG---LFDVIVSNPPYI 175 +G D+S +AL +AK NA + V + L D + V+ D+I+SNPPYI Sbjct: 146 PLEINYIGTDVSQEALAVAKDNAKLHQVQNQIQFLVGDLLNPVKELNLKPDIIISNPPYI 205 Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235 + L E ++P I+L G +G+ YR I + L G+ E+G Q V Sbjct: 206 ADKELQELEPE-LQYEPEIALKAGENGIDFYRQIISETEQLLTDGGIIGFEVGNQQSKSV 264 Query: 236 VRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 ++ E + DY RV+L + Sbjct: 265 YQLLEENNFINLTVIDDYAEVPRVILGEK 293 >gi|53804791|ref|YP_113525.1| protein methyltransferase HemK [Methylococcus capsulatus str. Bath] gi|53758552|gb|AAU92843.1| protein methyltransferase HemK [Methylococcus capsulatus str. Bath] Length = 284 Score = 268 bits (686), Expect = 6e-70, Method: Composition-based stats. Identities = 83/264 (31%), Positives = 127/264 (48%), Gaps = 8/264 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A D+ L V G + + P+ +L + +I + + + G R+F++ Sbjct: 23 ARLDAEVLLAHVIGKNRAYLRAWPERLLQADEERRFLASIAARARGVPVAYLTGVREFWS 82 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + D PRPETELLV+ A+ + +R+ RILDLGTG+G + + L E P Sbjct: 83 RSFKVCPDVLIPRPETELLVELAVEAAC----RRNRPRILDLGTGSGVIAVTLALECPDA 138 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIV 180 + VD+S AL +A+ NA G ++ L+ DWF+ + FD+IVSNPPY+ Sbjct: 139 EVWAVDVSESALAVARHNAAALG-AKTVRFLRGDWFAPLPADIRFDLIVSNPPYVSPSDP 197 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 L ++R ++PR +L DGL IAD L DG +E G++Q V RI Sbjct: 198 HLLRGDLR-YEPRQALVSVKDGLHDIALIADNAGPRLLPDGGLMIEHGFDQADAVARILG 256 Query: 241 SRKLFLVNAFKDYGGNDRVLLFCR 264 V +D G++RV R Sbjct: 257 KAGYRDVRHHRDLQGHERVTSALR 280 >gi|172059500|ref|YP_001807152.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Burkholderia ambifaria MC40-6] gi|171992017|gb|ACB62936.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Burkholderia ambifaria MC40-6] Length = 280 Score = 268 bits (686), Expect = 6e-70, Method: Composition-based stats. Identities = 85/265 (32%), Positives = 127/265 (47%), Gaps = 11/265 (4%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L G + Q+I D+ LD R + E + +++G R+F+ Sbjct: 19 DARVLLAYALGWTRTQLITRGDAPLDPASIERYRALEARRVAGEPVAQLVGMREFFGRPF 78 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 ++ D PRPETELLV++AL I+ R +LDLGTG+GA+ +++ E P + Sbjct: 79 DVTPDVLIPRPETELLVEAALD----AIDGRPHPAVLDLGTGSGAIAVSIAAERPDARVW 134 Query: 126 GVDISCKALEIAKSNAVTNGVSER----FDTLQSDWFSSVEG--LFDVIVSNPPYIESVI 179 +D S AL++A+ NA + R LQSDW+++++ FD IVSNPPYI Sbjct: 135 ALDRSPAALDVARRNADKLLDARRPGGPLHWLQSDWYAALDPALAFDTIVSNPPYIAQHD 194 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 ++R F+PR +L DGLS RTI L G +E GY+Q V + Sbjct: 195 PHLAQGDLR-FEPRGALTDDADGLSAIRTIVASAGAFLKPGGTLWIEHGYDQAEAVRALL 253 Query: 240 ESRKLFLVNAFKDYGGNDRVLLFCR 264 SR V + D +R R Sbjct: 254 VSRGFVAVESLADLAAIERTTGGRR 278 >gi|167627297|ref|YP_001677797.1| HemK family modification methylase [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|167597298|gb|ABZ87296.1| modification methylase, HemK family [Francisella philomiragia subsp. philomiragia ATCC 25017] Length = 285 Score = 268 bits (686), Expect = 6e-70, Method: Composition-based stats. Identities = 85/261 (32%), Positives = 134/261 (51%), Gaps = 6/261 (2%) Query: 4 LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63 D +C V G+ + ++ D LD+ + I+R L E + ILG++ F+N Sbjct: 25 KHDLQMIICDVLGVDKTYLYLNSDKHLDNAILTKINGKILRLLAGEPLAYILGYKYFWNQ 84 Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 +L ++ DT PR +TE +V + L +K ++ILDLGTG+GA+ LAL +E P + Sbjct: 85 KLYVTKDTLIPRADTEAVVAAVLDDIQ---DKNAQLKILDLGTGSGAIALALAEELPKSQ 141 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDC 182 V VD+ K L++AK NA+ N + + +QS W+ +++ FD+IVSNPPYI+ V Sbjct: 142 VVAVDLYSKTLDVAKKNALANKI-VNVEFMQSSWYENLDATKFDIIVSNPPYID-VDDAN 199 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 + VR+ +P +L +GL+ R I S L + G +E G+ Q D+ IF Sbjct: 200 IDDSVREHEPSKALFAADNGLADIRIIISQASGFLKQGGYLYIEHGFTQANDIANIFSHY 259 Query: 243 KLFLVNAFKDYGGNDRVLLFC 263 + KD DR Sbjct: 260 SFGDIQTIKDLNHKDRCTKAR 280 >gi|24375322|ref|NP_719365.1| hemK family protein [Shewanella oneidensis MR-1] gi|24350135|gb|AAN56809.1|AE015816_6 hemK family protein [Shewanella oneidensis MR-1] Length = 286 Score = 268 bits (686), Expect = 6e-70, Method: Composition-based stats. Identities = 82/261 (31%), Positives = 127/261 (48%), Gaps = 8/261 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A D+ L + + P+ L Q + R + + I+G R+F++ Sbjct: 25 AHLDAEVLLLYCLNKNRAYLYTWPEKALSVEQWKRFQQMVQRRQQGVPVAHIVGEREFWS 84 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + ++ T PRP+TE+LV+SAL + ++LDLGTGTGA+ LAL E + Sbjct: 85 LPFIVNDTTLIPRPDTEILVESAL-----NLPLESNAKVLDLGTGTGAIALALASERAAW 139 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181 + VD A+ +AK+N TN E+ + LQSDWFS+V FD+IVSNPPYI+ Sbjct: 140 QITAVDKVEDAVALAKAN-RTNLKLEQVEILQSDWFSAVTSHDFDLIVSNPPYIDEADEH 198 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P+ +L +G + IA +L +G +E G+ Q V + Sbjct: 199 LHQGDVR-FEPQSALTAADEGFADLYYIAKTARDYLKPNGYILLEHGFEQAVKLRAKLIE 257 Query: 242 RKLFLVNAFKDYGGNDRVLLF 262 V +D+G NDR + Sbjct: 258 LGYQNVATVRDFGSNDRCTMG 278 >gi|120612309|ref|YP_971987.1| HemK family modification methylase [Acidovorax citrulli AAC00-1] gi|120590773|gb|ABM34213.1| [protein release factor]-glutamine N5-methyltransferase [Acidovorax citrulli AAC00-1] Length = 311 Score = 268 bits (685), Expect = 6e-70, Method: Composition-based stats. Identities = 80/262 (30%), Positives = 117/262 (44%), Gaps = 13/262 (4%) Query: 3 ALRDSHSFLCRVTGLS---SHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRD 59 A D+ L G ++ + L ++ R E + + G ++ Sbjct: 27 ARIDAQLLLLHTLGRPDAGRAWLLAHDEDRLSAEEQQGFDALCARRQAGEPVAYLTGRKE 86 Query: 60 FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119 FY + L + + +PRP+TE LVD AL P + R+ DLGTG+GA+ LAL Sbjct: 87 FYGLPLQVDARVLDPRPDTETLVDWALEVLRPL----PLPRVADLGTGSGAIALALRHGL 142 Query: 120 PFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESV 178 P + V VD S AL +A++NA +S D ++++W + G FD IVSNPPYIE Sbjct: 143 PGAQVVLAVDASADALAVARANARRLHLS--VDFVRTNWLDGISGPFDAIVSNPPYIEED 200 Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238 +PR +L G DGL RTI S L G +E G+NQ V + Sbjct: 201 DPHL---AALVHEPRQALASGPDGLDDIRTIVVQSSSRLAPGGWLLLEHGWNQAQAVQAL 257 Query: 239 FESRKLFLVNAFKDYGGNDRVL 260 + V + D G+ R Sbjct: 258 LRNAGYAEVQSRADLAGHARCT 279 >gi|299132854|ref|ZP_07026049.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Afipia sp. 1NLS2] gi|298592991|gb|EFI53191.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Afipia sp. 1NLS2] Length = 292 Score = 268 bits (685), Expect = 7e-70, Method: Composition-based stats. Identities = 96/263 (36%), Positives = 140/263 (53%), Gaps = 1/263 (0%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 D+ L V L +I L+ + L + + R + E I RILG ++F+ Sbjct: 27 PELDARLLLGDVLQLDLTGLIAAAARTLNANETAALESRVQRRIDGEPIARILGHKEFWG 86 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + TLS T PRP+TE +V++AL D + I D+GTG+GA+ LALL E P Sbjct: 87 LSFTLSPATLVPRPDTETIVEAALDILKQDGRLNDALHISDIGTGSGAILLALLSELPNA 146 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182 +G+G DI+ A+ A NA G++ R ++ ++ ++ G FD+IVSNPPYI S +D Sbjct: 147 QGIGTDINPDAIHTATRNAAALGLNGRARFIECNYADALRGPFDLIVSNPPYIPSRDIDD 206 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 L +EVR DPR++LDGG DGL YR IA L G+ +EIG Q+ DV R+ Sbjct: 207 LAIEVRAHDPRLALDGGPDGLDAYRVIAPAAFELLVPGGVVILEIGQGQERDVARLTAGA 266 Query: 243 KL-FLVNAFKDYGGNDRVLLFCR 264 L V+ D G R ++ + Sbjct: 267 GLDAEVSVKADLGRIPRAVIGRK 289 >gi|332360426|gb|EGJ38237.1| protein-(glutamine-N5) methyltransferase [Streptococcus sanguinis SK355] Length = 276 Score = 268 bits (685), Expect = 7e-70, Method: Composition-based stats. Identities = 81/262 (30%), Positives = 129/262 (49%), Gaps = 11/262 (4%) Query: 3 ALRDSHSF--LCRVTG-LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRD 59 A ++ S + R LS ++ + + ++R L + L H+ I+G D Sbjct: 17 AGEEAESLSFVYRALNELSFTDFVLKLRTEVSQKERDQLKVIQEQLLAHKPAQYIIGSSD 76 Query: 60 FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119 F+ + L + PRPETE LV+ L+ + + +LD+GTG+GA+ LAL Sbjct: 77 FHGLTLKVDERVLIPRPETEELVELILSEN-----PESSLSVLDIGTGSGAIALALANSR 131 Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179 P ++ D+S AL +A NA G++ +QSD +++G FD+IVSNPPYI Sbjct: 132 PDWQITASDLSEDALSLAAENAQNCGLNP--TFVQSDCLDTIQGKFDIIVSNPPYISEAD 189 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 D +GL V +P ++L DG + YR IA+ +L + G +EIGY Q V + Sbjct: 190 KDEVGLNVLTSEPNMALFAEEDGYAVYRKIAEQAGGYLTEKGKIYLEIGYKQGEGVAELL 249 Query: 240 ES-RKLFLVNAFKDYGGNDRVL 260 + + KD G DR++ Sbjct: 250 KKFFPHKRIRVLKDQFGKDRMV 271 >gi|221068958|ref|ZP_03545063.1| modification methylase, HemK family [Comamonas testosteroni KF-1] gi|220713981|gb|EED69349.1| modification methylase, HemK family [Comamonas testosteroni KF-1] Length = 291 Score = 268 bits (685), Expect = 7e-70, Method: Composition-based stats. Identities = 78/267 (29%), Positives = 114/267 (42%), Gaps = 14/267 (5%) Query: 3 ALRDSHSFLCRVTGLS---SHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRD 59 A D+ L + +I L Q+ + + + G ++ Sbjct: 30 ARVDAQMLLLHLMRQPAHARAWLITHDSDALSQEQQQRWGQLCALRQQGMPVAYLTGSKE 89 Query: 60 FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119 FY + L + S +PRP+TE LVD AL I + VR++DLGTG+GA+ LAL + Sbjct: 90 FYGLDLAVDSRVLDPRPDTETLVDWALEL----IPEGQPVRVVDLGTGSGAIALALQSQR 145 Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIES 177 P + + VD S AL +A+SNA + W ++G D+IVSNPPYI + Sbjct: 146 PSARVIAVDASADALAVARSNAARLQLP--VQLAHGSWLEPLDGLEPVDLIVSNPPYIRA 203 Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237 +P +L G DGL R+I D L G E G++Q DV R Sbjct: 204 DDPHL---AALTHEPLSALASGADGLEDIRSIIDQAPARLKDGGWLLFEHGWDQAEDVAR 260 Query: 238 IFESRKLFLVNAFKDYGGNDRVLLFCR 264 + ++ V D G R CR Sbjct: 261 LMQAAGFEQVQHRHDLAGIARCTGACR 287 >gi|332366922|gb|EGJ44663.1| protein-(glutamine-N5) methyltransferase [Streptococcus sanguinis SK1059] Length = 276 Score = 268 bits (685), Expect = 7e-70, Method: Composition-based stats. Identities = 81/262 (30%), Positives = 126/262 (48%), Gaps = 11/262 (4%) Query: 3 ALRDSHSF--LCRVTG-LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRD 59 A ++ S + R LS ++ + + R L + L H+ I+G D Sbjct: 17 AGEEAESLSFVYRALNKLSFTDFVLKLRTEVSQEDRKQLKAIQEQLLAHKPAQYIIGSSD 76 Query: 60 FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119 F+ + L + PRPETE LV+ L+ + V +LD+GTG+GA+ LAL Sbjct: 77 FHGLTLKVDERVLIPRPETEELVELILSEN-----PESSVSVLDIGTGSGAIALALANNR 131 Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179 P ++ D+S AL +A NA + G+ ++SD +++ FD+IVSNPPYI Sbjct: 132 PDWQITASDLSEDALALATENAQSCGL--NLTFVRSDCLDAIQEKFDIIVSNPPYISEED 189 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 D +GL V +P ++L DG + YR IA+ +L K G +EIGY Q V + Sbjct: 190 KDEVGLNVLTSEPHMALFAEEDGYAVYRKIAEQAGDYLTKKGKIYLEIGYKQGDGVRELL 249 Query: 240 ESR-KLFLVNAFKDYGGNDRVL 260 + + KD G DR++ Sbjct: 250 KKSFPKKRIRVLKDQFGKDRMV 271 >gi|30249864|ref|NP_841934.1| hemK_fam: modification methylase [Nitrosomonas europaea ATCC 19718] gi|30180901|emb|CAD85823.1| hemK_fam: modification methylase [Nitrosomonas europaea ATCC 19718] Length = 289 Score = 268 bits (685), Expect = 7e-70, Method: Composition-based stats. Identities = 76/256 (29%), Positives = 116/256 (45%), Gaps = 7/256 (2%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L V + +I + +L Q + R + E + + G R FY++ Sbjct: 35 DARWILQSVLNTDAAFLIAHAEQLLSTDQVAHFRQMLARRIAGEPVAYLTGERGFYDLVF 94 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 ++ D PRPETELLV+ AL +I +LDLGTG+GA+ + L + Sbjct: 95 EVTPDVLIPRPETELLVEMAL----SKIPSDRKCNVLDLGTGSGAIAITLARHRASTCVT 150 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLG 184 VD S A+ +A+ NA + V +++DWFSS FDVIV+NPPY+ + Sbjct: 151 AVDFSPGAMAVARRNARMHAVK-NVVFIEADWFSSFTSEKFDVIVANPPYVAAGDPHLEE 209 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 ++R F+P +L +GL RTI +L G +E GY+Q + Sbjct: 210 GDLR-FEPLTALVAQDNGLDCIRTIIAQAPGYLEPSGWLMLEHGYDQADVCRELLAKAGF 268 Query: 245 FLVNAFKDYGGNDRVL 260 + D G DRV Sbjct: 269 THLFTRPDIAGTDRVT 284 >gi|332200608|gb|EGJ14680.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptococcus pneumoniae GA41317] Length = 279 Score = 268 bits (685), Expect = 8e-70, Method: Composition-based stats. Identities = 79/248 (31%), Positives = 121/248 (48%), Gaps = 9/248 (3%) Query: 16 GLSSHQVIVDPDSVLD-DRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEP 74 LS I + + ++ F+ + + H+ I+G DFY + L + P Sbjct: 33 NLSFTDFIFALQQEVTTEEEKQFVEDIYQQLAAHKPAQYIIGQADFYGMHLKVDERVLIP 92 Query: 75 RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134 RPETE LV+ L +L + +LD+GTG+GA+ LAL K P + D+S +AL Sbjct: 93 RPETEELVELILTENLET-----NLSVLDIGTGSGAIALALAKNRPDWSVTAADVSQEAL 147 Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194 ++A NA + + +SD F+ + +D+IVSNPPYI +GL V +P + Sbjct: 148 DLASENAKNQNL--QIFFKKSDCFTEISEKYDIIVSNPPYISREDESEVGLNVLYSEPHL 205 Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDY 253 +L DGL+ YR IA+ +L G +EIGY Q V +F V KD Sbjct: 206 ALFADEDGLAIYRRIAEDAKDYLKDGGKIYLEIGYKQGQSVPELFRKHLPEKKVRTLKDQ 265 Query: 254 GGNDRVLL 261 G DR+++ Sbjct: 266 FGQDRMVV 273 >gi|322374350|ref|ZP_08048864.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptococcus sp. C300] gi|321279850|gb|EFX56889.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptococcus sp. C300] Length = 278 Score = 268 bits (685), Expect = 8e-70, Method: Composition-based stats. Identities = 79/247 (31%), Positives = 120/247 (48%), Gaps = 8/247 (3%) Query: 16 GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75 LS + + + ++ F+ + H+ I+G DF+ ++L + PR Sbjct: 33 NLSFTDFVFALQQEVTEAEKQFVEEIFQQLASHKPAQYIIGQADFFGMQLKVDERVLIPR 92 Query: 76 PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135 PETE LV+ LA + D +++LD+GTG+GA+ L L K P + DIS ALE Sbjct: 93 PETEELVELILAEN-----PEDKLKVLDIGTGSGAIALGLAKNRPDWSVTAADISQDALE 147 Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195 +A NA + +SD F+ + +D+IVSNPPYI +GL V +P ++ Sbjct: 148 LASENARNQNL--NIFFKKSDCFAEISEKYDIIVSNPPYISREDESEVGLNVLHSEPHLA 205 Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDYG 254 L DGL+ YR IA+ +L G +EIGY Q V +F V KD Sbjct: 206 LFADEDGLAIYRRIAEDAKDYLTDGGKIYLEIGYKQGQSVPALFRKYLPEKRVRTLKDQF 265 Query: 255 GNDRVLL 261 G DR+++ Sbjct: 266 GQDRMVV 272 >gi|219670828|ref|YP_002461263.1| modification methylase, HemK family [Desulfitobacterium hafniense DCB-2] gi|219541088|gb|ACL22827.1| modification methylase, HemK family [Desulfitobacterium hafniense DCB-2] Length = 285 Score = 268 bits (685), Expect = 8e-70, Method: Composition-based stats. Identities = 76/269 (28%), Positives = 122/269 (45%), Gaps = 11/269 (4%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 D+ L + L Q+ ++ + L Q I R + E + I+ ++F Sbjct: 21 NPRWDADLLLGHILSLRREQLYLEREQTLGPEQEAAYQQMISRRARREPLQYIVKHQEFM 80 Query: 62 NVRLTLSSDTFEPRPETELLVDSALA------FSLPRIEKRDVVRILDLGTGTGAVCLAL 115 + + PR +TE+LV+ L S R + I DL TG+GA+ +++ Sbjct: 81 GLDFYVDERVLIPRADTEILVEKVLELKKEWQHSADRGGSEESPHIADLCTGSGALAISI 140 Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPY 174 P + VG D+S AL++A+ N GV R Q D+ + G +D+IVSNPPY Sbjct: 141 AHFWPQAEVVGTDLSRDALDVARFNGERLGV--RIQWRQGDFLEPLRGDSWDLIVSNPPY 198 Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234 + L E+ +PR++ GG DGL YR +A L + G+ +EIG+ Q Sbjct: 199 VTQAEYGELAPELAK-EPRMAFLGGADGLDFYRELAREGRSLLREKGIILMEIGWQQGNS 257 Query: 235 VVRIFESRKLFLVNAFKDYGGNDRVLLFC 263 V +F+ + +D GG DRV+ Sbjct: 258 VAELFQQQGFQT-QILQDLGGRDRVVFAR 285 >gi|322376709|ref|ZP_08051202.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptococcus sp. M334] gi|321282516|gb|EFX59523.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptococcus sp. M334] Length = 278 Score = 268 bits (685), Expect = 8e-70, Method: Composition-based stats. Identities = 78/247 (31%), Positives = 121/247 (48%), Gaps = 8/247 (3%) Query: 16 GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75 LS + + + ++ F+ + H+ I+G DF+ ++L + PR Sbjct: 33 NLSFTDFVFALQQEVTEEEKQFVKEIYQQLAAHKPAQYIIGHADFFGMQLIVDERVLIPR 92 Query: 76 PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135 PETE LV+ L + + + +LD+GTG+GA+ LAL K P + DIS +ALE Sbjct: 93 PETEELVEIILDEN-----HEENLSVLDIGTGSGAIALALSKNRPDWSVTAADISQEALE 147 Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195 +A NA + + +SD F+ + +D+IVSNPPYI +GL V +P ++ Sbjct: 148 LASENAKNQNL--QIFLKKSDCFTEISEKYDIIVSNPPYISREDESEVGLNVLHSEPHLA 205 Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDYG 254 L DGL+ YR IA+ +L G +EIGY Q V +F V KD Sbjct: 206 LFADEDGLAIYRRIAEDAKDYLKDGGKIYLEIGYKQGQSVPELFRKHLPEKRVRTLKDQF 265 Query: 255 GNDRVLL 261 G DR+++ Sbjct: 266 GQDRMVV 272 >gi|294785108|ref|ZP_06750396.1| methyltransferase [Fusobacterium sp. 3_1_27] gi|294486822|gb|EFG34184.1| methyltransferase [Fusobacterium sp. 3_1_27] Length = 383 Score = 268 bits (685), Expect = 8e-70, Method: Composition-based stats. Identities = 79/265 (29%), Positives = 137/265 (51%), Gaps = 8/265 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTN-AIVRSLKHESIHRILGWRDFY 61 L D+ V +S + + + + + + ++R+ K + + ILG +FY Sbjct: 104 PLLDTEYIFSDVLKVSRNTLKYSMSREIKEEDKDKIREMLVLRAKKRKPLQYILGEWEFY 163 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 + +S PR +TE+LV+ + E ILD+G+G+GA+ +A+ E Sbjct: 164 GLPFKVSEGVLIPRADTEILVEQCIQLMREVEEPN----ILDIGSGSGAISIAIANELKS 219 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVI 179 G+DI+ KA+E+A N N + + ++S+ F ++ +D+IVSNPPYI Sbjct: 220 SSVTGIDINEKAIELANENKTLNKIK-NINFVKSNLFEKIDKDFKYDLIVSNPPYISKNE 278 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 + L EV++++P+ +L DGL YR I+ +L G + EIGYNQ DV +I Sbjct: 279 YETLMPEVKNYEPQNALTDLGDGLYFYREISKLAGEYLKDTGYLAYEIGYNQAKDVTKIL 338 Query: 240 ESRKLFLVNAFKDYGGNDRVLLFCR 264 ++ +++ KDYGGNDRV++ + Sbjct: 339 QNNNFDVLSVIKDYGGNDRVIIAKK 363 Score = 40.9 bits (95), Expect = 0.19, Method: Composition-based stats. Identities = 3/45 (6%), Positives = 18/45 (40%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK 47 ++ + V L + + + L + ++ + + + + ++ Sbjct: 22 PRLEAEKLVSYVLNLDRIALYIHYERELSEEEKNSIKHYLKKMVE 66 >gi|260494287|ref|ZP_05814418.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Fusobacterium sp. 3_1_33] gi|260198433|gb|EEW95949.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Fusobacterium sp. 3_1_33] Length = 383 Score = 268 bits (685), Expect = 8e-70, Method: Composition-based stats. Identities = 78/265 (29%), Positives = 138/265 (52%), Gaps = 8/265 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTN-AIVRSLKHESIHRILGWRDFY 61 L D+ V ++ + + + + + + ++R+ K + + ILG +FY Sbjct: 104 PLLDTEYIFSDVLKVNKNTLKYSMSREIKEEDKDKIREMLVLRAKKRKPLQYILGEWEFY 163 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 + ++ PR +TE+LV+ + E ILD+G+G+GA+ +A+ E Sbjct: 164 GLPFKVNEGVLIPRADTEILVEQCIQLMREVEEPN----ILDIGSGSGAISIAIANELKS 219 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVI 179 G+DI+ KA+E+A N N + E + ++S+ F ++ +D+IVSNPPYI Sbjct: 220 SSVTGIDINEKAIELAIENKTLNKI-ENVNFIESNLFEKLDKDFKYDLIVSNPPYISKEE 278 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 + L EV++++P+ +L DGL YR I+ +L G + EIGYNQ DV +I Sbjct: 279 YETLMPEVKNYEPQNALTDLGDGLYFYREISKLAGEYLKDTGYLAYEIGYNQAKDVTKIL 338 Query: 240 ESRKLFLVNAFKDYGGNDRVLLFCR 264 ++ +++ KDYGGNDRV++ + Sbjct: 339 QNNNFDILSVIKDYGGNDRVVIAKK 363 Score = 40.1 bits (93), Expect = 0.36, Method: Composition-based stats. Identities = 3/45 (6%), Positives = 17/45 (37%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK 47 ++ + V L + + + L + ++ + + + ++ Sbjct: 22 PRLEAEKLVSYVLNLDRIALYIHYERELSEDEKTSIKQYLKKMVE 66 >gi|332075635|gb|EGI86103.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptococcus pneumoniae GA17545] Length = 279 Score = 268 bits (685), Expect = 8e-70, Method: Composition-based stats. Identities = 79/249 (31%), Positives = 120/249 (48%), Gaps = 9/249 (3%) Query: 16 GLSSHQVIVDPDSVLD-DRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEP 74 LS I + + ++ F+ + + H+ I+G DFY ++L + P Sbjct: 33 NLSFTDFIFALQQEVTTEEEKQFVEDIYQQLAAHKPAQYIIGQEDFYGMQLKVDERVLIP 92 Query: 75 RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134 RPETE LV+ LA + + +LD+GTG+GA+ LAL K P + DIS AL Sbjct: 93 RPETEELVELILAEN-----SETNLSVLDIGTGSGAIALALAKNRPDWSVTAADISQDAL 147 Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194 ++A NA + + +SD F+ + +D+IVSNPPYI +GL V +P + Sbjct: 148 DVANENAKNQNL--QIFLKKSDCFTEISEKYDIIVSNPPYISREDESEVGLNVLHSEPHL 205 Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDY 253 +L DGL+ YR I + +L G +EIGY Q V +F V KD Sbjct: 206 ALFADEDGLAIYRRIVEDAKDYLKDGGKIYLEIGYKQGQSVPELFRKHLPEKHVRTLKDQ 265 Query: 254 GGNDRVLLF 262 G DR+++ Sbjct: 266 FGQDRMVVI 274 >gi|327538346|gb|EGF25019.1| modification methylase, HemK family [Rhodopirellula baltica WH47] Length = 296 Score = 268 bits (685), Expect = 8e-70, Method: Composition-based stats. Identities = 82/265 (30%), Positives = 127/265 (47%), Gaps = 3/265 (1%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 D+ L G ++ D V ++ QR + R + + +++G+R+FY+ Sbjct: 31 PRLDAEILLAHARGCQRIELYTSFDKVPEEEQRVAFRELVRRRGEGAPVAQLVGYREFYS 90 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + + + + PRPETE LV A+ R+ R +LD+GTG+GA+ +A+ K P Sbjct: 91 ISIRVDENVLVPRPETEHLVIEAIDQIKGRMSDRPSPTVLDIGTGSGAIAVAIAKSLPKT 150 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIESVIV 180 + VDIS AL+IAK N +S+R LQSD F +E FDVI SNPPYI Sbjct: 151 QVTAVDISLTALDIAKWNVENLKLSDRVTLLQSDLFDGLEPDQTFDVICSNPPYISQSEY 210 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 D L VR+F+PR +L G DG + + LN G +E+ + E Sbjct: 211 DELPTTVREFEPRGALLSGPDGTEIIARLLTDSVQRLNDGGQLIIELSPMIAGVCKTLAE 270 Query: 241 SR-KLFLVNAFKDYGGNDRVLLFCR 264 ++ KD G++R+L + Sbjct: 271 QNGGYQEIHLIKDLAGHERILSMQK 295 >gi|194336187|ref|YP_002017981.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Pelodictyon phaeoclathratiforme BU-1] gi|194308664|gb|ACF43364.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Pelodictyon phaeoclathratiforme BU-1] Length = 299 Score = 268 bits (685), Expect = 8e-70, Method: Composition-based stats. Identities = 70/261 (26%), Positives = 119/261 (45%), Gaps = 8/261 (3%) Query: 7 SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66 + L V G S ++ + + + + + ++ + + G + FY ++ Sbjct: 35 AELLLGHVLGKSRLELYLHHNRPVYQDELDRFRRLCRQRIEGRPVQYLTGEQYFYGLQFF 94 Query: 67 LSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALLKESPFFKGV 125 + PRPETELLV+ L +ILD+GTG+G + + L K P Sbjct: 95 VDERVLIPRPETELLVEQVLDALGMTGRGGSRKAKILDIGTGSGCIAVTLAKLFPELTVS 154 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV------EGLFDVIVSNPPYIESVI 179 +D S +ALE+A+ N + +GV + + +D+F E +D+IVSNPPYI Sbjct: 155 AIDCSLEALEVARINVLKHGVESQVSCIHADFFDEFFATRLPETSYDLIVSNPPYIPVCE 214 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 + L EV+ ++P+I+L G+ Y IA ++ L G E+ + V + Sbjct: 215 WEGLQREVKQYEPKIALTT-PQGVECYHAIAAQAAKLLVPGGRLCFELHADAAAVVSELL 273 Query: 240 ESRKLFLVNAFKDYGGNDRVL 260 E+ + KDY G DR+L Sbjct: 274 EANGFGGITVTKDYSGLDRIL 294 >gi|262369774|ref|ZP_06063102.1| methyl transferase [Acinetobacter johnsonii SH046] gi|262315842|gb|EEY96881.1| methyl transferase [Acinetobacter johnsonii SH046] Length = 272 Score = 267 bits (684), Expect = 9e-70, Method: Composition-based stats. Identities = 88/256 (34%), Positives = 128/256 (50%), Gaps = 10/256 (3%) Query: 9 SFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLS 68 L +T + S +++ D VL D Q A+ R E + + G + F+ + L ++ Sbjct: 23 WLLEHITKIDSFDLVMKKDQVLTDEQEQAYVAALARIEAGEPLAYVTGSQPFWTLDLIVT 82 Query: 69 SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128 DT PRP+TE+LV++ L LP + RI+DLGTGTGAV L+L E + D Sbjct: 83 PDTLVPRPDTEVLVETVLRLDLP-----EDARIVDLGTGTGAVALSLACERDTWDITATD 137 Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF-DVIVSNPPYIESVIVDCLGLEV 187 I L +A+ NA + +++ + WF+ + F DVIVSNPPYI++ L Sbjct: 138 IYEPTLAVAQQNAEKHDLND-VTFVCGSWFAPLNRKFFDVIVSNPPYIDADDAHMQDLAT 196 Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLV 247 +P +L GL+ R I +HL DG +E GY+Q V +IF+ V Sbjct: 197 ---EPERALVAADHGLADLRVIIQQGKKHLTLDGWVVLEHGYDQADAVQKIFKEAGYKQV 253 Query: 248 NAFKDYGGNDRVLLFC 263 KDYGGNDRV L Sbjct: 254 RTVKDYGGNDRVTLGQ 269 >gi|323351594|ref|ZP_08087248.1| protein-(glutamine-N5) methyltransferase [Streptococcus sanguinis VMC66] gi|322122080|gb|EFX93806.1| protein-(glutamine-N5) methyltransferase [Streptococcus sanguinis VMC66] Length = 276 Score = 267 bits (684), Expect = 9e-70, Method: Composition-based stats. Identities = 83/262 (31%), Positives = 128/262 (48%), Gaps = 11/262 (4%) Query: 3 ALRDSHSF--LCRVTG-LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRD 59 A ++ S + R LS ++ + + R L + L H+ I+G D Sbjct: 17 AGEEAESLSFVYRALNKLSFTDFVLKLRTEVSQEDRKQLKAIQEQLLAHKPAQYIIGSSD 76 Query: 60 FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119 F+ + L + PRPETE LV+ L+ + + +LD+GTG+GA+ LAL Sbjct: 77 FHGLTLKVDERVLIPRPETEELVELILSEN-----PESSLSVLDIGTGSGAIALALANSR 131 Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179 P ++ D+S AL +A NA ++G+ +QSD +++G FD+IVSNPPYI Sbjct: 132 PDWQITASDLSGDALALAAENAQSSGL--NLVFVQSDCLDAIQGKFDIIVSNPPYISEAD 189 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 D +GL V +P ++L DG + YR IA+ +L K G +EIGY Q V + Sbjct: 190 KDEVGLNVLTSEPHMALFAEEDGYAVYRKIAEQAGDYLTKIGKIYLEIGYKQGDGVRELL 249 Query: 240 ESR-KLFLVNAFKDYGGNDRVL 260 E + KD G DR++ Sbjct: 250 EKNFPQKRIRVLKDQFGKDRMV 271 >gi|148984975|ref|ZP_01818218.1| HemK protein [Streptococcus pneumoniae SP3-BS71] gi|147922673|gb|EDK73790.1| HemK protein [Streptococcus pneumoniae SP3-BS71] gi|301799987|emb|CBW32577.1| putative methyltransferase [Streptococcus pneumoniae OXC141] Length = 279 Score = 267 bits (684), Expect = 9e-70, Method: Composition-based stats. Identities = 79/248 (31%), Positives = 121/248 (48%), Gaps = 9/248 (3%) Query: 16 GLSSHQVIVDPDSVLD-DRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEP 74 LS I + + ++ F+ + + H+ I+G DFY + L + P Sbjct: 33 NLSFTDFIFALQQEVTTEEEKQFVEDIYQQLAAHKPAQYIIGQADFYGMHLKVDERVLIP 92 Query: 75 RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134 RPETE LV+ L +L + +LD+GTG+GA+ LAL K P + D+S +AL Sbjct: 93 RPETEELVELILTENLET-----NLSVLDIGTGSGAIALALAKNRPDWSVTAADVSQEAL 147 Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194 ++A NA + + +SD F+ + +D+IVSNPPYI +GL V +P + Sbjct: 148 DLANENAKNQNL--QIFFKKSDCFTEISEKYDIIVSNPPYISREDESEVGLNVLYSEPHL 205 Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDY 253 +L DGL+ YR IA+ +L G +EIGY Q V +F V KD Sbjct: 206 ALFADEDGLAIYRRIAEDAKDYLKDGGKIYLEIGYKQGQSVPELFRKHLPEKKVRTLKDQ 265 Query: 254 GGNDRVLL 261 G DR+++ Sbjct: 266 FGQDRMVV 273 >gi|146277161|ref|YP_001167320.1| HemK family modification methylase [Rhodobacter sphaeroides ATCC 17025] gi|145555402|gb|ABP70015.1| modification methylase, HemK family [Rhodobacter sphaeroides ATCC 17025] Length = 278 Score = 267 bits (684), Expect = 9e-70, Method: Composition-based stats. Identities = 93/263 (35%), Positives = 138/263 (52%), Gaps = 8/263 (3%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 A RD+ + G++ ++ + L A+ + + +I+G R F+ Sbjct: 21 DAPRDARRLMAHALGIAPDRITLHLPDPLLPEADARFEAALAARTARQPVAQIVGERLFW 80 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 ++ DT +PRPETE L+++ALA +LDLGTGTG + + LL E P Sbjct: 81 GRPFRVTRDTLDPRPETECLIEAALA--------APFATLLDLGTGTGCIAITLLAERPA 132 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181 +GV D+S AL +A+ NA+ GV++R D +SDWF++V FD+I+SNPPYI + + Sbjct: 133 ARGVATDLSPAALAVAEGNALALGVADRLDCRRSDWFAAVPERFDLILSNPPYIAAHEMA 192 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 L EVR+++PR++L DGL YR I G S HL G +EIG Q DV + S Sbjct: 193 ELAPEVREWEPRMALTPEGDGLDAYRAITAGASAHLAPGGRLLLEIGAGQGADVAGLCAS 252 Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264 L V D G DR++ R Sbjct: 253 AGLTEVRILPDLDGRDRLVAARR 275 >gi|322373125|ref|ZP_08047661.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptococcus sp. C150] gi|321278167|gb|EFX55236.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptococcus sp. C150] Length = 277 Score = 267 bits (684), Expect = 1e-69, Method: Composition-based stats. Identities = 80/247 (32%), Positives = 129/247 (52%), Gaps = 8/247 (3%) Query: 17 LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRP 76 Q I+ + + L++ + H+ ILG+ DF+ +R + PRP Sbjct: 34 WDLTQFILHLRQEVSEEDEKLLSSIFNQLKAHKPAQYILGFEDFHGLRFQVDKRVLIPRP 93 Query: 77 ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136 ETE LV+ LA + + +++LD+GTG+GA+ ++L + P ++ D+S ALE+ Sbjct: 94 ETEELVELILAEN-----PKTELKVLDIGTGSGAIAVSLKESCPLWQVTASDLSVDALEL 148 Query: 137 AKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL 196 A+ NA N V +QSD F ++ G FD+IVSNPPYI + +GL V +P+++L Sbjct: 149 ARENAKLNRVD--ISFIQSDVFENISGSFDIIVSNPPYISENDKNEVGLNVLTSEPKLAL 206 Query: 197 DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDYGG 255 DGL+ YR I + ++HL+ G EIGY Q D+ ++ V KD G Sbjct: 207 FADEDGLAIYRQIIERAAKHLSPQGKLYFEIGYKQGSDLKKLLSLHFPDKCVRVLKDQFG 266 Query: 256 NDRVLLF 262 DR+++ Sbjct: 267 QDRMVVI 273 >gi|121593272|ref|YP_985168.1| HemK family modification methylase [Acidovorax sp. JS42] gi|120605352|gb|ABM41092.1| [protein release factor]-glutamine N5-methyltransferase [Acidovorax sp. JS42] Length = 280 Score = 267 bits (684), Expect = 1e-69, Method: Composition-based stats. Identities = 79/257 (30%), Positives = 114/257 (44%), Gaps = 12/257 (4%) Query: 6 DSHSFLCRVTG---LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 D+ L V G ++ L R K E + +LG ++F+ Sbjct: 22 DAQMLLLHVLGRAPTDRAWLLAHDGDTLPAAAMEQYAALRARRAKGEPVAYLLGRKEFWG 81 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L++ + +PRP+TE LV AL + R R+ DLGTG+GA+ LAL E P Sbjct: 82 LPLSVDARVLDPRPDTETLVAWALEV----LATRAAPRVADLGTGSGAIALALQHERPDA 137 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182 + + VD S AL +A++NA G+ RF +Q +W V+G FD IVSNPPYI + Sbjct: 138 QVLAVDASAGALAVARANAGQLGLPVRF--IQGNWLHGVDGPFDAIVSNPPYIPAQDPHL 195 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 +P +L G DGL RTI L G +E G++Q V + Sbjct: 196 ---AALTHEPLSALASGADGLEDIRTIVAQAPARLAPGGWLLLEHGWDQAEAVQALLRDA 252 Query: 243 KLFLVNAFKDYGGNDRV 259 V + D G R Sbjct: 253 GFDQVQSRHDLAGIARC 269 >gi|32475816|ref|NP_868810.1| hemK protein [Rhodopirellula baltica SH 1] gi|32446359|emb|CAD76187.1| hemK protein [Rhodopirellula baltica SH 1] Length = 296 Score = 267 bits (684), Expect = 1e-69, Method: Composition-based stats. Identities = 82/265 (30%), Positives = 128/265 (48%), Gaps = 3/265 (1%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 D+ L G ++ D V ++ QR + R + + +++G+R+FY+ Sbjct: 31 PRLDAEILLAHARGCQRIELYTSFDKVPEEEQRVAFRELVRRRGEGAPVAQLVGYREFYS 90 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + + + + PRPETE LV A+ R+ R +LD+GTG+GA+ +A+ K P Sbjct: 91 ISIRVDENVLVPRPETEHLVIEAIDQIKGRLSDRPSPTVLDIGTGSGAIAVAIAKSLPKT 150 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIESVIV 180 + VDIS AL+IAK N +S+R LQSD F +E FDVI SNPPYI Sbjct: 151 QVTAVDISLTALDIAKWNVENLKLSDRVTLLQSDLFDGLEPDQTFDVICSNPPYISQSEY 210 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 D L VR+F+PR +L G DG + + + LN G +E+ + E Sbjct: 211 DELPTTVREFEPRGALLSGPDGTEIIARLLNDSVQRLNDGGQLIIELSPMIAGVSKTLAE 270 Query: 241 SR-KLFLVNAFKDYGGNDRVLLFCR 264 ++ KD G++R+L + Sbjct: 271 QNGGYKEIHLIKDLAGHERILSMQK 295 >gi|306829485|ref|ZP_07462675.1| protein-(glutamine-N5) methyltransferase [Streptococcus mitis ATCC 6249] gi|304428571|gb|EFM31661.1| protein-(glutamine-N5) methyltransferase [Streptococcus mitis ATCC 6249] Length = 278 Score = 267 bits (684), Expect = 1e-69, Method: Composition-based stats. Identities = 80/247 (32%), Positives = 118/247 (47%), Gaps = 8/247 (3%) Query: 16 GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75 LS + + + F+ + H+ I+G DF+ ++L + PR Sbjct: 33 NLSFTDFVFTLQQEVTKEEENFVEEIYQQLAAHKPAQYIIGQADFFGMQLKVDERVLIPR 92 Query: 76 PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135 PETE LVD L + + ++ILD+GTG+GA+ LAL K P + DIS ALE Sbjct: 93 PETEELVDLILTEN-----PEESLKILDIGTGSGAIALALAKNRPDWSVTAADISQVALE 147 Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195 +A NA + +SD F+ + +D+IVSNPPYI +GL V +P ++ Sbjct: 148 LASENASNQNL--NIFFKKSDCFAEISEKYDIIVSNPPYISREDESEVGLNVLHSEPHLA 205 Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDYG 254 L DGL+ YR IA+ +L G +EIGY Q V +F V KD Sbjct: 206 LFADEDGLAIYRRIAEDAKDYLTDGGKIYLEIGYKQGQSVPALFRKHLPEKRVRTLKDQF 265 Query: 255 GNDRVLL 261 G DR+++ Sbjct: 266 GQDRMVV 272 >gi|157376590|ref|YP_001475190.1| HemK family modification methylase [Shewanella sediminis HAW-EB3] gi|157318964|gb|ABV38062.1| modification methylase, HemK family [Shewanella sediminis HAW-EB3] Length = 280 Score = 267 bits (684), Expect = 1e-69, Method: Composition-based stats. Identities = 82/262 (31%), Positives = 127/262 (48%), Gaps = 8/262 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 D+ L + + PD L Q + R L I I+G R+F++ Sbjct: 23 PKLDAEVILLHIIHQQRGYLYTWPDERLTSDQVTAFGEMVARRLLGTPIAHIVGEREFWS 82 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + ++ T PRP+TE+LV++AL + D R+LDLGTGTGA+ L+L E P + Sbjct: 83 LPFMVNPTTLIPRPDTEILVETAL-----NLPLADSARVLDLGTGTGAIALSLAYEKPEW 137 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181 + VD +A+ +AK+N + + + +QSDWF SV F++IVSNPPYI+ Sbjct: 138 QITAVDKIIEAVALAKANRAHLKLP-QVEIVQSDWFDSVACYDFNLIVSNPPYIDETDEH 196 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P+ +L G +G + IA +L G +E GY Q + + + Sbjct: 197 LSQGDVR-FEPQSALTAGEEGFADLYHIASCARDYLAPGGYLLLEHGYQQAIQLRKKMIE 255 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 V +D+G NDR L Sbjct: 256 LGYENVATVRDFGSNDRCTLGR 277 >gi|253702391|ref|YP_003023580.1| modification methylase, HemK family [Geobacter sp. M21] gi|251777241|gb|ACT19822.1| modification methylase, HemK family [Geobacter sp. M21] Length = 285 Score = 267 bits (683), Expect = 1e-69, Method: Composition-based stats. Identities = 87/261 (33%), Positives = 127/261 (48%), Gaps = 10/261 (3%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 ++ LC L + ++ D L D + + R + E + ILG ++F Sbjct: 28 NPRLEAEWMLCEALSLDRVGLYLNFDKPLSDAELALYRGMVARRGRREPLQYILGSQEFM 87 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 + ++ PR +TE+LV A+ ILD+GTG+G V +A+ K P Sbjct: 88 GLEFRVTPAVLIPRHDTEVLVTEAVK------RGGACRSILDIGTGSGCVAIAVAKALPE 141 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIV 180 + VD+S +A+E+A+ NA NGVS +F Q F G FD++VSNPPYI S + Sbjct: 142 AEVCTVDVSGEAIEVARGNAERNGVSVQF--FQGSLFEPFAGKRFDMLVSNPPYITSADL 199 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 L EVRDF+P +LDGG DGL YR I G HLN G E+G Q +V+ + Sbjct: 200 ASLQQEVRDFEPAGALDGGGDGLDFYRRITAGAPAHLNPGGWLLFEVGAGQAGEVLELLN 259 Query: 241 SRKLFLVNAFK-DYGGNDRVL 260 S + D G +RV+ Sbjct: 260 SGGFTNERFSQTDPAGIERVV 280 >gi|325122702|gb|ADY82225.1| methyl transferase [Acinetobacter calcoaceticus PHEA-2] Length = 271 Score = 267 bits (683), Expect = 1e-69, Method: Composition-based stats. Identities = 82/256 (32%), Positives = 121/256 (47%), Gaps = 10/256 (3%) Query: 9 SFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLS 68 L ++S ++ + L +Q + R E + + G + F+ + L ++ Sbjct: 23 WLLEHFLKINSLELKFRLEQELTVQQEQDYLAGLERIQNGEPLAYVTGSQPFWTLDLKVT 82 Query: 69 SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128 SDT PRP+TE+LV++ L +LP + I+DLGTGTGA+ LAL E P + D Sbjct: 83 SDTLVPRPDTEILVETVLNLNLP-----NTANIVDLGTGTGAIALALASERPDWFVTATD 137 Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEV 187 I LE+AK NA + + R WF ++E FD+IVSNPPYI+ + Sbjct: 138 IYVPTLEVAKENAQVHNLQ-RVKFACGAWFDALEPQKFDLIVSNPPYIDPEDEHM---QA 193 Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLV 247 +PR +L GL+ I L G ++E GY+Q V IF + Sbjct: 194 LATEPRRALVADHQGLADIEIIIAQGKDWLKPQGWIALEHGYDQGQAVRNIFAEHGFSEI 253 Query: 248 NAFKDYGGNDRVLLFC 263 +DYG NDRV L C Sbjct: 254 RTIQDYGQNDRVTLAC 269 >gi|253681154|ref|ZP_04861957.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Clostridium botulinum D str. 1873] gi|253563003|gb|EES92449.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Clostridium botulinum D str. 1873] Length = 282 Score = 267 bits (683), Expect = 1e-69, Method: Composition-based stats. Identities = 69/263 (26%), Positives = 122/263 (46%), Gaps = 7/263 (2%) Query: 4 LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63 + DS + +V +I++ + + + + I + ILG +F + Sbjct: 23 ILDSQLLIQKVLKKDKLFIILNRNLEISLKDQEEFFKLIKLRKDKMPVKYILGECEFMGL 82 Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 + PR +TE+LV+ + I++ + D+ G+GA+ +++ K Sbjct: 83 NFNVKEGVLIPRADTEVLVEEVIK----EIKENGYNNVCDVCCGSGAIGISIGKYIKETI 138 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVIV 180 DIS A+E+ K+N ++ + +SD + ++DVIVSNPPYI+ ++ Sbjct: 139 IDCYDISDIAIEVTKNNINKFQLNNKVYVYKSDLLDEAKRQNKMYDVIVSNPPYIKEEVI 198 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 L +V++++P I+L GG DGL Y I LN+ GL + EIGY+Q +V I Sbjct: 199 PTLMKDVKEYEPYIALCGGKDGLYFYNKITKNSVDFLNRGGLLAFEIGYDQGKEVKDILI 258 Query: 241 SRKLFLVNAFKDYGGNDRVLLFC 263 + KD G DRV++ Sbjct: 259 ENGFSNIKVIKDLAGLDRVVMGR 281 >gi|255264803|ref|ZP_05344145.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Thalassiobium sp. R2A62] gi|255107138|gb|EET49812.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Thalassiobium sp. R2A62] Length = 277 Score = 267 bits (683), Expect = 1e-69, Method: Composition-based stats. Identities = 88/262 (33%), Positives = 132/262 (50%), Gaps = 7/262 (2%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 A+RD V +S ++ + + Q+ L I R HE + +++G R F+ Sbjct: 21 DAVRDIRRLAAHVLQVSPDRMTLHMGDDVTAGQKAQLHVLIARRAAHEPVSKLIGQRAFW 80 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 ++ D +PRPETE L+++ L R+LDLGTG+GA+ + L E Sbjct: 81 GRDFAVTPDVLDPRPETECLIEACLG-------AGPAARVLDLGTGSGAIAVTLAAEWDA 133 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181 D+S AL++A+ NAV + V R + + SDWF +V+G +D+IVSNPPYI + Sbjct: 134 AAVTATDLSHAALDVARQNAVRHDVGARIEFVGSDWFDAVDGCYDLIVSNPPYIALAEMT 193 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 L EVR DPR++L DGL+ YR I DG + G +VEIG Q V + + Sbjct: 194 GLAPEVRGHDPRMALTDEADGLTCYRIICDGALAKMVSGGRLAVEIGPTQGDAVALMMQE 253 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 L + D G +RV+L Sbjct: 254 AGLVEIEIRPDLDGRNRVVLGR 275 >gi|264676910|ref|YP_003276816.1| modification methylase, HemK family [Comamonas testosteroni CNB-2] gi|262207422|gb|ACY31520.1| modification methylase, HemK family [Comamonas testosteroni CNB-2] Length = 291 Score = 267 bits (683), Expect = 1e-69, Method: Composition-based stats. Identities = 79/267 (29%), Positives = 117/267 (43%), Gaps = 14/267 (5%) Query: 3 ALRDSHSFLCRVTGLS---SHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRD 59 A D+ L + +I L Q+ + + + G ++ Sbjct: 30 ARVDAQMLLLHLMQQPAHARAWLITHDCDALSQEQQQRWDQLCTLRQQGTPVAYLTGNKE 89 Query: 60 FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119 FY + L + S +PRP+TE LVD AL + +R VR++DLGTG+GA+ LAL + Sbjct: 90 FYGLDLAVDSRVLDPRPDTETLVDWALEL----MPERQPVRVIDLGTGSGAIALALQSQR 145 Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIES 177 P + + VD S AL +A+SNA + +F W ++G D+IVSNPPYI + Sbjct: 146 PSARVIAVDASADALAVARSNAARLQLPVQFA--HGSWLEPLDGLEPVDLIVSNPPYIRA 203 Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237 +P +L G DGL R+I D L G E G++Q DV R Sbjct: 204 DDPHL---AALTHEPLSALASGADGLEDIRSIIDQAPARLKDGGWLLFEHGWDQAEDVAR 260 Query: 238 IFESRKLFLVNAFKDYGGNDRVLLFCR 264 + ++ V D G R CR Sbjct: 261 LMQAAGFEQVQHRHDLAGIARCTGGCR 287 >gi|237742324|ref|ZP_04572805.1| methyltransferase [Fusobacterium sp. 4_1_13] gi|229429972|gb|EEO40184.1| methyltransferase [Fusobacterium sp. 4_1_13] Length = 370 Score = 267 bits (683), Expect = 1e-69, Method: Composition-based stats. Identities = 82/265 (30%), Positives = 137/265 (51%), Gaps = 8/265 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTN-AIVRSLKHESIHRILGWRDFY 61 L D+ V +S + + + + + + ++R+ K + + ILG +FY Sbjct: 91 PLLDTEYIFSDVLKVSRNTLKYSMSREIKEENKDKIREMLVLRAKKRKPLQYILGEWEFY 150 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 + +S PR +TE+LV+ + E ILD+G+GTGA+ +A+ E Sbjct: 151 GLPFKVSEGVLIPRADTEILVEQCIQLMREVEEPN----ILDIGSGTGAISIAIANELKS 206 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVI 179 G+DI+ KA+E+A N N + E + ++SD F ++ +D+IVSNPPYI Sbjct: 207 SSVTGIDINEKAIELANENKTLNKI-ENVNFIKSDLFEKIDKDFKYDLIVSNPPYISKNE 265 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 + L EV++++P+ +L DGL YR I+ HL + EIGYNQ DV +I Sbjct: 266 YETLMPEVKNYEPQNALTDLGDGLYFYREISKLAGEHLKDTAYLAYEIGYNQAKDVTKIL 325 Query: 240 ESRKLFLVNAFKDYGGNDRVLLFCR 264 ++ +++ KDYGGNDRV++ + Sbjct: 326 QNNNFDILSVIKDYGGNDRVVIAKK 350 Score = 41.2 bits (96), Expect = 0.14, Method: Composition-based stats. Identities = 3/45 (6%), Positives = 18/45 (40%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK 47 ++ + V L + + + L + ++ + + + + ++ Sbjct: 9 PRLEAEKLVSYVLNLDRIALYIHYERELSEEEKNLIKHYLKKMVE 53 >gi|184158673|ref|YP_001847012.1| methylase of polypeptide chain release factor [Acinetobacter baumannii ACICU] gi|332874368|ref|ZP_08442279.1| protein-(glutamine-N5) methyltransferase [Acinetobacter baumannii 6014059] gi|183210267|gb|ACC57665.1| Methylase of polypeptide chain release factor [Acinetobacter baumannii ACICU] gi|322507516|gb|ADX02970.1| Methyl transferase [Acinetobacter baumannii 1656-2] gi|323518588|gb|ADX92969.1| methylase of polypeptide chain release factor [Acinetobacter baumannii TCDC-AB0715] gi|332737447|gb|EGJ68363.1| protein-(glutamine-N5) methyltransferase [Acinetobacter baumannii 6014059] Length = 271 Score = 267 bits (683), Expect = 1e-69, Method: Composition-based stats. Identities = 81/256 (31%), Positives = 122/256 (47%), Gaps = 10/256 (3%) Query: 9 SFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLS 68 L ++S ++ + L +Q + R E + + G + F+ + L ++ Sbjct: 23 WLLEHFLKINSLELKFRLEQELTVQQEQDYLAGLERIQNGEPLAYVTGSQPFWTLDLKVT 82 Query: 69 SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128 SDT PRP+TE+LV++ L +LP+ I+DLGTGTGA+ LAL E P + D Sbjct: 83 SDTLVPRPDTEVLVETVLNLNLPK-----NANIVDLGTGTGAIALALASERPDWFVTATD 137 Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEV 187 I L++AK NA T+G+ WF ++E FD+IVSNPPYI+ + Sbjct: 138 IYAPTLDVAKENAQTHGL-HHVKFACGAWFEALEPQQFDLIVSNPPYIDPEDEHM---QA 193 Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLV 247 +PR +L GL+ I L G ++E GY+Q V +F + Sbjct: 194 LATEPRRALVADHHGLADIEIIIAQGKNWLKPQGWIALEHGYDQGQAVRNVFAEHGFSEI 253 Query: 248 NAFKDYGGNDRVLLFC 263 +DYG NDRV L C Sbjct: 254 KTIQDYGQNDRVTLAC 269 >gi|157370233|ref|YP_001478222.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Serratia proteamaculans 568] gi|157321997|gb|ABV41094.1| modification methylase, HemK family [Serratia proteamaculans 568] Length = 276 Score = 266 bits (682), Expect = 1e-69, Method: Composition-based stats. Identities = 83/262 (31%), Positives = 131/262 (50%), Gaps = 8/262 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A RD+ L VTG + ++ +++L +Q+ L +VR + E + ++G R+F++ Sbjct: 20 ARRDAEILLGFVTGRARTFLMAFGETLLTQQQQEQLERLLVRRERGEPVAYLIGEREFWS 79 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L++S T PRP+TE LV+ AL ILDLGTGTGA+ LAL E Sbjct: 80 LPLSVSPATLIPRPDTECLVELALERL-----PSSSCNILDLGTGTGAIALALASERQDC 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181 + GVD+ +A+ +A+ NA + LQ WF+ + G F +I SNPPYI++ Sbjct: 135 RVTGVDLQPEAVALAQHNAQKLAIG-NAQFLQGSWFAPLAGQTFALIASNPPYIDAADPH 193 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P +L GL+ I ++L G +E G+ Q V + ++ Sbjct: 194 LAQGDVR-FEPSSALVAQQHGLADLSAIVQQAPQYLQPQGWLLLEHGWQQGESVRALLQA 252 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 + +DYG NDRV Sbjct: 253 AGFISIATRRDYGDNDRVTFGQ 274 >gi|83644570|ref|YP_433005.1| methylase of polypeptide chain release factors [Hahella chejuensis KCTC 2396] gi|83632613|gb|ABC28580.1| Methylase of polypeptide chain release factors [Hahella chejuensis KCTC 2396] Length = 276 Score = 266 bits (682), Expect = 2e-69, Method: Composition-based stats. Identities = 86/262 (32%), Positives = 131/262 (50%), Gaps = 8/262 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 D+ L V G +I DSVLD+ I + ++G R+F++ Sbjct: 19 PRLDAEVLLAHVLGKGRTYLISHNDSVLDEPALQAYQRLIAERETGRPVAHLIGKREFWS 78 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + +S T PRPET L + ++LDLGTGTGA+ AL E P + Sbjct: 79 LEFQVSPATLIPRPET-----ELLVELVLEEAAPAGAKVLDLGTGTGAIACALAHERPDW 133 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVD 181 + VD+S +A+E+A +N ++ G++ L+S+W+ +V + F VIVSNPPYI+++ + Sbjct: 134 RFTAVDVSQEAVELATTNVLSLGLT-NVRCLRSNWYDAVGDEQFHVIVSNPPYIDALDIH 192 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P +L GL+ R IA G RHL GL +VE GY+Q IF + Sbjct: 193 LTQGDVR-FEPASALVAADHGLADIRMIAAGAGRHLLAGGLLAVEHGYDQGAAAREIFST 251 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 V +D G+DR+ L Sbjct: 252 AGYVDVRTHQDLAGHDRITLGR 273 >gi|225175857|ref|ZP_03729850.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Dethiobacter alkaliphilus AHT 1] gi|225168781|gb|EEG77582.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Dethiobacter alkaliphilus AHT 1] Length = 283 Score = 266 bits (682), Expect = 2e-69, Method: Composition-based stats. Identities = 79/262 (30%), Positives = 127/262 (48%), Gaps = 5/262 (1%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 + R++ L + G + + L Q + R E + G ++F Sbjct: 23 RPRREAQFLLTALLGCDAAWLYAHDQEKLTAPQWAEFQAWLARRATGEPFAYLAGQKEFM 82 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 + ++ D PRPETE LV++ ++ RIL++G G+GAV ++L K P Sbjct: 83 GLCFAVTPDVLIPRPETEFLVEAV----AEELQAHTSPRILEIGAGSGAVAVSLAKLLPK 138 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIV 180 + V VD+S ALEIA+ NA +GV+ R + L D ++ V + FD +VSNPPYI + + Sbjct: 139 ARVVAVDVSQAALEIAQKNAARHGVAGRVEFLAGDLYAPVADEYFDAVVSNPPYISAADI 198 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 L +V+DF+PR++L GG DGL YR + + N+ + + E+G Q V + Sbjct: 199 LKLQCDVKDFEPRLALCGGEDGLDFYRRLTGELDVLSNRPKMLAFEVGMGQAQAVAALCL 258 Query: 241 SRKLFLVNAFKDYGGNDRVLLF 262 KD G DR++ Sbjct: 259 KAGYENTRQIKDLAGIDRIITA 280 >gi|189347186|ref|YP_001943715.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Chlorobium limicola DSM 245] gi|189341333|gb|ACD90736.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Chlorobium limicola DSM 245] Length = 296 Score = 266 bits (682), Expect = 2e-69, Method: Composition-based stats. Identities = 77/262 (29%), Positives = 112/262 (42%), Gaps = 6/262 (2%) Query: 7 SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66 + L + G + ++ + + + L + I+G + FY Sbjct: 34 AELLLAHLFGEDRLWLYLNHNRPVSGSELDEFRGLCRDRLDGRPVQYIIGEQFFYGKPFV 93 Query: 67 LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126 + PRPETELLV+ A F R R+LD+GTG+G + + L P+ + Sbjct: 94 VDERVLIPRPETELLVEHAAEFLTTRKPVNPECRLLDIGTGSGCIAVTLAGLFPYLEVTA 153 Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS-----VEGLFDVIVSNPPYIESVIVD 181 +D S AL++A+ NA GV +R Q+D F FDVIVSNPPYI D Sbjct: 154 LDRSEDALDVARGNARKQGVLDRILFFQADMFDPDLVSRFSSPFDVIVSNPPYIPECEWD 213 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 L EVR F+P+ +L DG Y I + L G +EI V I S Sbjct: 214 GLQKEVRGFEPKDALIT-PDGSDAYLAICRTAALILKPGGALCLEIHAEGAEMVRSIMAS 272 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 ++ KDY G DR++ Sbjct: 273 EHFGSISVLKDYSGFDRIVSGT 294 >gi|324994441|gb|EGC26354.1| protein-(glutamine-N5) methyltransferase [Streptococcus sanguinis SK678] Length = 276 Score = 266 bits (682), Expect = 2e-69, Method: Composition-based stats. Identities = 82/262 (31%), Positives = 126/262 (48%), Gaps = 11/262 (4%) Query: 3 ALRDSHSF--LCRVTG-LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRD 59 A ++ S + R LS ++ + + R L + L H+ I+G D Sbjct: 17 AGEEAESLSFVYRALNKLSFTDFVLKLRTEVSQEDRKQLKAIQEQLLAHKPAQYIIGSSD 76 Query: 60 FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119 F+ + L + PRPETE LV+ L+ + + +LD+GTG+GA+ LAL Sbjct: 77 FHGLTLKVDERVLIPRPETEELVELILSEN-----PESSLSVLDIGTGSGAIALALANSR 131 Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179 P ++ D+S AL +A NA + G+ +QSD ++ G FD+IVSNPPYI Sbjct: 132 PNWQITASDLSDDALALAAENAQSCGL--NLAFVQSDCLDAISGNFDIIVSNPPYISEAD 189 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 D +GL V +P ++L DG + YR IA+ +L K G +EIGY Q + + Sbjct: 190 KDEVGLNVLTSEPHMALFAEEDGYAVYRKIAEQAGDYLTKKGKIYLEIGYKQGDGIRELL 249 Query: 240 ESR-KLFLVNAFKDYGGNDRVL 260 E + KD G DR++ Sbjct: 250 EKNFPQKRIRVLKDQFGKDRMV 271 >gi|15616791|ref|NP_240003.1| HemK protein [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|219681546|ref|YP_002467931.1| HemK protein [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] gi|257471229|ref|ZP_05635228.1| HemK protein [Buchnera aphidicola str. LSR1 (Acyrthosiphon pisum)] gi|11132929|sp|P57269|HEMK_BUCAI RecName: Full=Protein methyltransferase hemK homolog; AltName: Full=M.BusHemKP gi|25403559|pir||A84950 hemK protein [imported] - Buchnera sp. (strain APS) gi|10038854|dbj|BAB12889.1| hemK protein [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|219624389|gb|ACL30544.1| HemK protein [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] Length = 277 Score = 266 bits (682), Expect = 2e-69, Method: Composition-based stats. Identities = 85/259 (32%), Positives = 134/259 (51%), Gaps = 7/259 (2%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 +S L VT + +I + L ++Q +L + I R E I I+ ++F+++ L Sbjct: 23 ESELLLSYVTKHTRSFIISSDEIQLTEKQYKYLNHLIHRRSLGEPIAYIIKEKEFWSLSL 82 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 +S DT PRP+TE+LV+ AL+ K + ILDLGTG GA+ LAL + + + Sbjct: 83 CVSYDTLIPRPDTEILVERALSKI-----KSNSACILDLGTGCGAIALALASINSNWNII 137 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185 G+D S AL IA+ NA SDWF +++ F++IVSNPPY+ + Sbjct: 138 GIDKSENALAIARINASKLNFK-NVTFFFSDWFLNIKKKFNIIVSNPPYVSKKEIKFFKK 196 Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245 ++ F+P +L +GLS I +L G +E G+ QKV V +F+ Sbjct: 197 DIF-FEPLSALISDNNGLSDIENIIKNSKHYLFYGGWLMIEHGWRQKVKVQYLFKKYNFH 255 Query: 246 LVNAFKDYGGNDRVLLFCR 264 + +++DYGGNDRV + + Sbjct: 256 EIESYQDYGGNDRVTIGKK 274 >gi|197120069|ref|YP_002140496.1| peptide chain release factor methyltransferase [Geobacter bemidjiensis Bem] gi|197089429|gb|ACH40700.1| peptide chain release factor methyltransferase [Geobacter bemidjiensis Bem] Length = 285 Score = 266 bits (682), Expect = 2e-69, Method: Composition-based stats. Identities = 84/261 (32%), Positives = 125/261 (47%), Gaps = 10/261 (3%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 ++ LC L + ++ D L D + + R + E + ILG ++F Sbjct: 28 NPRLEAEWMLCEALSLDRVGLYLNFDKPLSDAELALYRGMVARRGRREPLQYILGSQEFM 87 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 + ++ PR +TE+LV A+ ILD+GTG+G V +A+ K P Sbjct: 88 GLEFRVTPAVLIPRHDTEVLVTEAVK------RGEACRSILDIGTGSGCVAVAVAKALPE 141 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIV 180 + VD+S A+E+A+ NA NGV+ +F Q F G FD++VSNPPYI S + Sbjct: 142 AEVFTVDVSADAIEVARGNAERNGVTVQF--FQGSLFEPFAGKRFDMLVSNPPYITSADL 199 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 L EVRDF+P +LDGG DGL YR I +LN G E+G Q +V+ + Sbjct: 200 ATLQQEVRDFEPAGALDGGGDGLDFYRRITADAPAYLNPGGWLLFEVGAGQAGEVLELLN 259 Query: 241 SRKLFLVNAFK-DYGGNDRVL 260 S + D G +RV+ Sbjct: 260 SGGFSNERFSQTDPAGIERVV 280 >gi|325273243|ref|ZP_08139523.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Pseudomonas sp. TJI-51] gi|324101620|gb|EGB99186.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Pseudomonas sp. TJI-51] Length = 276 Score = 266 bits (682), Expect = 2e-69, Method: Composition-based stats. Identities = 82/249 (32%), Positives = 121/249 (48%), Gaps = 8/249 (3%) Query: 16 GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75 G S + P+ ++ + R E + ILG + F+ + L ++ T PR Sbjct: 32 GKSRSYLHTWPERIVSSEDAQTYAGYLQRRRGGEPVAYILGQQGFWKIDLEVAPHTLIPR 91 Query: 76 PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135 P+TELLV++AL ++ R+LDLGTGTGA+ LAL E P ++ VD +A Sbjct: 92 PDTELLVETALE-----LQPAAPARVLDLGTGTGAIALALASERPAWQVTAVDRVAEAAA 146 Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194 +A+ N +S S WF S+ G FD+IVSNPPYI + + +VR F+P Sbjct: 147 LAERNRQRLSLSNT-QVRLSHWFDSLAGERFDLIVSNPPYIAAADPHLVAGDVR-FEPSS 204 Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYG 254 +L G DGL R I HL G +E GY+Q V + + V + D G Sbjct: 205 ALVAGPDGLDDLRVIVTQAPGHLVPGGWLLLEHGYDQAAAVRALLVEQGFNEVASRTDLG 264 Query: 255 GNDRVLLFC 263 G++R+ L Sbjct: 265 GHERISLGR 273 >gi|317048555|ref|YP_004116203.1| release factor-specific protein-(glutamine-N5) methyltransferase [Pantoea sp. At-9b] gi|316950172|gb|ADU69647.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Pantoea sp. At-9b] Length = 276 Score = 266 bits (681), Expect = 2e-69, Method: Composition-based stats. Identities = 90/262 (34%), Positives = 128/262 (48%), Gaps = 8/262 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 RD+ L VTG S ++ D++LDD Q L + R + E I ++G R+F++ Sbjct: 20 PKRDAEILLAFVTGKSRSWLVAFDDALLDDVQLQQLATLLARRAQGEPIAHLVGEREFWS 79 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +S T PRP+TE+LV+ ALA ILDLGTGTGA+ LAL E P Sbjct: 80 LPLRVSDATLIPRPDTEVLVEQALAHL-----PATAATILDLGTGTGAIALALASERPDC 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVD 181 + G D A+ +A+ NA ++ S WF+++ FD+I SNPPYI++ Sbjct: 135 QVTGCDRVEAAVALAQDNAQRLHIT-NVQFFLSHWFAALPSQRFDLIASNPPYIDAADHH 193 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P +L GL+ R I L G +E G+ Q V + Sbjct: 194 LQQGDVR-FEPLSALVAEEAGLADLREIITTAPAWLLPGGWLLLEHGWQQGEAVRTLMTQ 252 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 + VN DYGGN RV L Sbjct: 253 QGYQQVNTVDDYGGNPRVTLGQ 274 >gi|26987470|ref|NP_742895.1| methyl transferase [Pseudomonas putida KT2440] gi|24982134|gb|AAN66359.1|AE016264_3 methyl transferase [Pseudomonas putida KT2440] Length = 276 Score = 266 bits (681), Expect = 2e-69, Method: Composition-based stats. Identities = 81/249 (32%), Positives = 121/249 (48%), Gaps = 8/249 (3%) Query: 16 GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75 G S + P+ ++ + R E + ILG + F+ + L ++ T PR Sbjct: 32 GKSRSYLHTWPERIVSSEDAETYAGYLKRRRGGEPVAYILGLQGFWKIDLEVAPHTLIPR 91 Query: 76 PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135 P+TELLV++AL ++ ++LDLGTGTGA+ LAL E P ++ VD +A Sbjct: 92 PDTELLVETALE-----LQPASPAKVLDLGTGTGAIALALASERPAWQVTAVDRVEEAAA 146 Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194 +A+ N G++ S WF S+ FD+IVSNPPYI + + +VR F+P Sbjct: 147 LAERNRQRLGLA-NARVRLSHWFDSLAAERFDLIVSNPPYIAAEDPHLVAGDVR-FEPSS 204 Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYG 254 +L G DGL R IA HL G +E GY+Q V + V + D G Sbjct: 205 ALVAGADGLDDLRVIAAQAPAHLLPGGWLLLEHGYDQAAAVRALLAEHGFIEVASRTDLG 264 Query: 255 GNDRVLLFC 263 G++R+ L Sbjct: 265 GHERITLGR 273 >gi|168576250|ref|ZP_02722144.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptococcus pneumoniae MLV-016] gi|183577963|gb|EDT98491.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptococcus pneumoniae MLV-016] Length = 279 Score = 266 bits (681), Expect = 2e-69, Method: Composition-based stats. Identities = 78/248 (31%), Positives = 120/248 (48%), Gaps = 9/248 (3%) Query: 16 GLSSHQVIVDPDSVLD-DRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEP 74 LS I + + ++ F+ + + H+ I+G DFY + L + P Sbjct: 33 NLSFTDFIFALQQEVTTEEEKQFVEDIYQQLAAHKPAQYIIGQADFYGMHLKVDERVLIP 92 Query: 75 RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134 RPETE LV+ L +L + +LD+GTG+G + LAL K P + D+S +AL Sbjct: 93 RPETEELVELILTENLET-----NLSVLDIGTGSGTIALALAKNRPDWSVTAADVSQEAL 147 Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194 ++A NA + + +SD F+ + +D+IVSNPPYI +GL V +P + Sbjct: 148 DLASENAKNQNL--QIFFKKSDCFTEISEKYDIIVSNPPYISREDESEVGLNVLYSEPHL 205 Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDY 253 +L DGL+ YR IA+ +L G +EIGY Q V +F V KD Sbjct: 206 ALFADEDGLAIYRRIAEDAKDYLKDGGKIYLEIGYKQGQSVPELFRKHLPEKKVRTLKDQ 265 Query: 254 GGNDRVLL 261 G DR+++ Sbjct: 266 FGQDRMVV 273 >gi|91785344|ref|YP_560550.1| modification methylase HemK [Burkholderia xenovorans LB400] gi|91689298|gb|ABE32498.1| [protein release factor]-glutamine N5-methyltransferase [Burkholderia xenovorans LB400] Length = 286 Score = 266 bits (681), Expect = 2e-69, Method: Composition-based stats. Identities = 86/260 (33%), Positives = 128/260 (49%), Gaps = 11/260 (4%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 ++ L V G Q+I D L R E + +++G R+F+ + Sbjct: 25 EARILLTHVLGWRPTQLITRSDEPLGAELVERYRALEARRAAGEPVAQLVGAREFFGLDF 84 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 ++ PRPETELLV++ALA +E R+LDLGTGTGA+ +A+ P + Sbjct: 85 EVTPHVLIPRPETELLVETALA----ALENLSRPRVLDLGTGTGAIAVAIASMRPDAQVW 140 Query: 126 GVDISCKALEIAKSNAVTNGVSER----FDTLQSDWFSSVEG--LFDVIVSNPPYIESVI 179 +D S +AL +A NA ++R QSDW+ S++ FDVIVSNPPYI S Sbjct: 141 ALDHSAEALAVATRNAARLLDAKRPGGAVALTQSDWYDSLDAALRFDVIVSNPPYIASGD 200 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 ++R F+PR +L DGLS R I G L G+ +E GY+Q V ++ Sbjct: 201 PHLAQGDLR-FEPRGALTDEADGLSAIRAIIAGAPTRLAAGGVLWIEHGYDQAEAVRKLL 259 Query: 240 ESRKLFLVNAFKDYGGNDRV 259 +R V + +D G +R+ Sbjct: 260 TARGFTQVRSERDLAGIERI 279 >gi|254448386|ref|ZP_05061847.1| protein-(glutamine-N5) methyltransferase, release factor-specific [gamma proteobacterium HTCC5015] gi|198261999|gb|EDY86283.1| protein-(glutamine-N5) methyltransferase, release factor-specific [gamma proteobacterium HTCC5015] Length = 275 Score = 266 bits (681), Expect = 2e-69, Method: Composition-based stats. Identities = 75/257 (29%), Positives = 117/257 (45%), Gaps = 7/257 (2%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A D+ LC T S +I + L+ Q + + + R E I +LG ++F++ Sbjct: 19 AALDAQLLLCHATNKSRSFLIAHGEEALNAEQAQYFESLVKRRADGEPIAYLLGQQEFWS 78 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + ++ T PR +TE L++ SL + I DLG G+G + L L P Sbjct: 79 LPFEVNPHTLIPRADTESLIEH----SLQLFGPDSTIDIADLGAGSGCIGLTLAHCLPKA 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVD 181 + V+ S AL + + N + ++S+W + E FD+I+SNPPY+ Sbjct: 135 NVLCVERSRDALAMIEKNRQQLNI-NNAKAIESNWCQDLGEQHFDLIISNPPYVRENDEH 193 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P +L G DGL R +A V +HL G VE GY+Q V RI + Sbjct: 194 LDQGDVR-FEPITALTAGADGLDDIRQLATQVPKHLKPQGHFIVEFGYDQSEAVKRILSA 252 Query: 242 RKLFLVNAFKDYGGNDR 258 + D GG+ R Sbjct: 253 AGFQSLTDITDLGGHIR 269 >gi|327474248|gb|EGF19655.1| protein-(glutamine-N5) methyltransferase [Streptococcus sanguinis SK408] Length = 276 Score = 266 bits (681), Expect = 2e-69, Method: Composition-based stats. Identities = 85/262 (32%), Positives = 127/262 (48%), Gaps = 11/262 (4%) Query: 3 ALRDSHSF--LCRVTG-LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRD 59 A ++ S + R LS ++ + + R L + L H+ I+G D Sbjct: 17 AGEEAESLSFVYRALNKLSFTDFVLKLQTEVSLEDREQLKAIQEQLLAHKPAQYIIGSSD 76 Query: 60 FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119 F+ + L + PRPETE LV+ L+ + + ILD+GTG+GA+ L L Sbjct: 77 FHGLTLKVDERVLIPRPETEELVELILSENRE-----SSLSILDIGTGSGAIALTLANSR 131 Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179 P ++ D+S AL +A NA + G+S +QSD F ++ G FD+IVSNPPYI Sbjct: 132 PDWQITASDLSGDALSLATENAQSCGLS--LTFIQSDCFEAISGNFDIIVSNPPYISEAD 189 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 D +GL V +P ++L DG + YR IA+ HL K G +EIGY Q V + Sbjct: 190 KDEVGLNVLTSEPHMALFAEEDGYAVYRKIAEQAGDHLTKKGKIYLEIGYKQGDGVRELL 249 Query: 240 ESR-KLFLVNAFKDYGGNDRVL 260 + + KD G DR++ Sbjct: 250 KKSFPQKRIRVLKDQFGKDRMV 271 >gi|258592987|emb|CBE69298.1| Putative protein methyltransferase hemK modifies release factors RF-1 and RF-2 [NC10 bacterium 'Dutch sediment'] Length = 297 Score = 266 bits (680), Expect = 2e-69, Method: Composition-based stats. Identities = 86/279 (30%), Positives = 128/279 (45%), Gaps = 17/279 (6%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A D+ + +G+ Q I+DP+ + + L + + R E + ILG ++F++ Sbjct: 13 APLDAAYLMEAASGIPRWQFILDPEQPIPLDRSGLLESMVSRREAREPVAYILGVKEFWS 72 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR-----------ILDLGTGTGAV 111 + L +S D PRP+TE LV++AL + + + I+DLGTG GAV Sbjct: 73 LLLAVSPDVLIPRPDTETLVETALDKISVKCQGSETQHSTLNTRHSQLVIVDLGTGCGAV 132 Query: 112 CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-----GLFD 166 LAL E P +D S A IA N T G++ R +Q D G D Sbjct: 133 ALALAVELPRALIYAIDRSPGACRIAGRNIDTLGLTNRVRCVQGDLLEPFRTIDAGGGCD 192 Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE 226 +IVSNPPYI S L E+ ++P ++DGG DGL +YR I + +L G E Sbjct: 193 LIVSNPPYIPSAACRVLAPEITAYEPVEAIDGGPDGLRYYRRIIEAAPAYLRDGGWLVFE 252 Query: 227 IGYNQKVDVVRIFES-RKLFLVNAFKDYGGNDRVLLFCR 264 +G Q V+ + +D G DRV+ R Sbjct: 253 VGDGQASAVMELIRKTEGFGPAEVRQDMAGRDRVVCAPR 291 >gi|239832946|ref|ZP_04681275.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Ochrobactrum intermedium LMG 3301] gi|239825213|gb|EEQ96781.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Ochrobactrum intermedium LMG 3301] Length = 290 Score = 266 bits (680), Expect = 2e-69, Method: Composition-based stats. Identities = 104/259 (40%), Positives = 154/259 (59%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 D+ + TG + +I P+ ++D L +A+ R K E +HRI+G R+F+ + Sbjct: 27 LDARLLVEWATGRTRLDLISAPEQLVDGAAIQTLCDALERRAKGEPVHRIMGVREFFGLP 86 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 LS++T EPRP+TE LV+ + ++ + + +LD+GTGTGA+ ++LL G Sbjct: 87 FRLSTETLEPRPDTEALVELVIPALDVLAQQENTLELLDMGTGTGAIIISLLHRFERAHG 146 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184 VG+D++ AL +A+ NA+ NGV +RF L+SDWF V G F +IVSNPPYI + L Sbjct: 147 VGLDMAEGALVMARINAIANGVGDRFAALKSDWFQHVSGRFHLIVSNPPYIPHEDIAGLS 206 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 EVR+ DP +LDGG+DGL+ YR +A + HL + G+ +VEIG Q DV +FES Sbjct: 207 REVREHDPLAALDGGVDGLNFYRALAQKAADHLYRKGMVAVEIGAGQFQDVEALFESAGF 266 Query: 245 FLVNAFKDYGGNDRVLLFC 263 L D GG+ R +LF Sbjct: 267 SLAGHASDLGGHRRAMLFA 285 >gi|257785107|ref|YP_003180324.1| modification methylase, HemK family [Atopobium parvulum DSM 20469] gi|257473614|gb|ACV51733.1| modification methylase, HemK family [Atopobium parvulum DSM 20469] Length = 297 Score = 266 bits (680), Expect = 3e-69, Method: Composition-based stats. Identities = 80/262 (30%), Positives = 130/262 (49%), Gaps = 7/262 (2%) Query: 7 SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66 + L VTGLS Q+ + D L +R + AI R + E + + G F ++ LT Sbjct: 31 AEWLLSAVTGLSRVQLYTNFDKPLSADERARMREAIKRRAEGEPLQYVTGEMPFRHLVLT 90 Query: 67 LSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALLKESPFFKGV 125 PRPETE+LVD AL D VR+L++G GTG + L++ E P + Sbjct: 91 CEPGVLIPRPETEVLVDVALEGVDASTPNADGEVRVLEVGVGTGCISLSIATERPQTRVY 150 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDW----FSSVEGLFDVIVSNPPYIESVIVD 181 D+S KA+ +A N + +R + ++ D + + F V+VSNPPYI + +++ Sbjct: 151 ATDLSPKAIALATRNRDALDLQDRVELIECDLVEGVPAELAQSFSVLVSNPPYIPTSVLE 210 Query: 182 -CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 + EV+ F+P+++LDGG DGL YR + + R L G+ VE+ + E Sbjct: 211 QEVPAEVKGFEPKLALDGGEDGLDVYRRLLEVAPRMLLPGGMLCVELYEGHLDKAAHLAE 270 Query: 241 SRKLFL-VNAFKDYGGNDRVLL 261 + ++ V +D R+L+ Sbjct: 271 EQGIWESVEVKEDLTHRPRILV 292 >gi|294055590|ref|YP_003549248.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Coraliomargarita akajimensis DSM 45221] gi|293614923|gb|ADE55078.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Coraliomargarita akajimensis DSM 45221] Length = 280 Score = 266 bits (680), Expect = 3e-69, Method: Composition-based stats. Identities = 83/262 (31%), Positives = 122/262 (46%), Gaps = 7/262 (2%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 A D+ + G+ + +D + L D Q L + R E + ILG +F Sbjct: 22 NAKLDTDLLIAHSLGIKRLDIYLDLERPLTDAQLDDLRPLVKRRASREPLQYILGSVEFA 81 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 + L PRPETE LV+ L + +R ILDLGTGTGA+ LAL K Sbjct: 82 GLELKTDVRALIPRPETEELVE-----LLVQRLQRAPTCILDLGTGTGALALALAKRYSD 136 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVI 179 VD+S +AL +A NA S+R L+ WF + FD+IVSNPPY+ Sbjct: 137 AAVTAVDLSAEALTLAAENAEALDFSDRVRLLEGSWFVPLPESERFDLIVSNPPYLTEEE 196 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 + EV ++P +L G+DGL RTI LN+ GL +VE G +Q +++++ Sbjct: 197 MTTAEPEVVGYEPHSALVSGVDGLDDLRTIFAEAKERLNEGGLFAVETGISQHDELLKMA 256 Query: 240 ESRKLFLVNAFKDYGGNDRVLL 261 + + +D G R + Sbjct: 257 KQGGFEHAESVEDLSGRSRFVF 278 >gi|315613126|ref|ZP_07888036.1| protein-(glutamine-N5) methyltransferase [Streptococcus sanguinis ATCC 49296] gi|315314688|gb|EFU62730.1| protein-(glutamine-N5) methyltransferase [Streptococcus sanguinis ATCC 49296] Length = 278 Score = 266 bits (680), Expect = 3e-69, Method: Composition-based stats. Identities = 76/247 (30%), Positives = 118/247 (47%), Gaps = 8/247 (3%) Query: 16 GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75 LS + + + F+ + H+ I+G DF+ ++L + PR Sbjct: 33 NLSFTDFVFALQQEVTKEEENFVEEIYQQLAAHKPAQYIVGHADFFGMQLKVDERVLIPR 92 Query: 76 PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135 PETE LV+ LA + + +++LD+GTG+GA+ L L K P + DIS AL+ Sbjct: 93 PETEELVELILAEN-----PEENLKVLDIGTGSGAIALGLAKNRPDWSVTAADISKDALQ 147 Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195 +A NA + +SD F+ + +D+IVSNPPYI +GL V +P ++ Sbjct: 148 LASENARNQNL--NIFFKKSDCFAEISEKYDIIVSNPPYISREDESEVGLNVLHSEPHLA 205 Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDYG 254 L DGL+ YR IA+ +L G +EIGY Q V +F + KD Sbjct: 206 LFADEDGLAIYRRIAEDAKDYLTDGGKIYLEIGYKQGQSVPALFRKYLPEKRIRTLKDQF 265 Query: 255 GNDRVLL 261 G DR+++ Sbjct: 266 GQDRMVV 272 >gi|306825266|ref|ZP_07458608.1| protein-(glutamine-N5) methyltransferase [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|304432702|gb|EFM35676.1| protein-(glutamine-N5) methyltransferase [Streptococcus sp. oral taxon 071 str. 73H25AP] Length = 278 Score = 266 bits (680), Expect = 3e-69, Method: Composition-based stats. Identities = 78/247 (31%), Positives = 119/247 (48%), Gaps = 8/247 (3%) Query: 16 GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75 LS + + + ++ F+ + H+ I+G DF+ ++L + PR Sbjct: 33 KLSFTDFVFALQQEVTEEEKQFVEEIFQQLAVHKPAQYIIGHVDFFGMQLKVDERVLIPR 92 Query: 76 PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135 PETE LV+ L + + ++ILD+GTG+GA+ L L K P + DIS ALE Sbjct: 93 PETEELVELILTEN-----PEENLKILDIGTGSGAIALGLAKNRPDWSVTAADISQAALE 147 Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195 +A NA + +SD F+ + +D+IVSNPPYI +GL V +P ++ Sbjct: 148 LASENARNQNL--NIFFKKSDCFAEISEKYDIIVSNPPYISREDESEVGLNVLHSEPHLA 205 Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDYG 254 L DGL+ YR IA+ +L G +EIGY Q V +F V KD Sbjct: 206 LFADEDGLAIYRRIAEDAKDYLTDGGKIYLEIGYKQGQSVPALFRKHLPEKRVRTLKDQF 265 Query: 255 GNDRVLL 261 G DR+++ Sbjct: 266 GQDRMVV 272 >gi|221201721|ref|ZP_03574759.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Burkholderia multivorans CGD2M] gi|221207204|ref|ZP_03580214.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Burkholderia multivorans CGD2] gi|221172792|gb|EEE05229.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Burkholderia multivorans CGD2] gi|221178537|gb|EEE10946.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Burkholderia multivorans CGD2M] Length = 280 Score = 266 bits (680), Expect = 3e-69, Method: Composition-based stats. Identities = 84/261 (32%), Positives = 123/261 (47%), Gaps = 11/261 (4%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L G + Q+I D LD R E + +++G R+F+ Sbjct: 19 DARVLLAHALGWTRTQLITRSDRPLDAEAVERYRALEARRAAGEPVAQLVGMREFFGRPF 78 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 ++ D PRPETELLV++AL I+ +LDLGTG+GA+ +++ E P + Sbjct: 79 DVTPDVLIPRPETELLVEAALD----AIDGLAHPAVLDLGTGSGAIAVSIAAERPDARVW 134 Query: 126 GVDISCKALEIAKSNAVTNGVSER----FDTLQSDWFSSVEG--LFDVIVSNPPYIESVI 179 +D S AL +A+ NA + R LQSDW+++++ FD IVSNPPYI Sbjct: 135 ALDRSAAALAVAQRNADKLLDARRPGGPLQWLQSDWYAALDPALAFDAIVSNPPYIAQHD 194 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 ++R F+PR +L DGLS RTI G HL G +E GY+Q V + Sbjct: 195 PHLSQGDLR-FEPRGALTDDADGLSAIRTIVAGARAHLKPGGTLWIEHGYDQAEAVRALL 253 Query: 240 ESRKLFLVNAFKDYGGNDRVL 260 S V + D +R Sbjct: 254 ASHGFDAVESLADLAAIERTT 274 >gi|218235275|ref|YP_002370105.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacillus cereus B4264] gi|218163232|gb|ACK63224.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacillus cereus B4264] Length = 283 Score = 266 bits (680), Expect = 3e-69, Method: Composition-based stats. Identities = 70/259 (27%), Positives = 116/259 (44%), Gaps = 7/259 (2%) Query: 8 HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67 LC V ++ ++++ + + Q T I + ++ I ++G+ FY + Sbjct: 25 EIVLCHVLKVNRTGLLMNMREEITEEQEKSFTEFIHKHVEGIPIQYMIGYEMFYGRSFFV 84 Query: 68 SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 + + PRPETE L+ L + + + D+GTG+GA+ + L E+ V Sbjct: 85 NEEVLIPRPETEELIVGVLERIERHF-GDEKLHVADIGTGSGAISITLALENKNLHVYTV 143 Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG---LFDVIVSNPPYIESVIVDCLG 184 DI+ +++E+AK NA G D S DV+VSNPPYI L Sbjct: 144 DIAQESIEVAKENAKALGAV--VTFYHGDLLSPFHKTGQKLDVVVSNPPYIPEEDWRGLS 201 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-K 243 V++ +P+ +L GG DGL YR + + L K + + EIG Q DV ++ + Sbjct: 202 PVVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEIGVGQGEDVKKLLQQAFP 261 Query: 244 LFLVNAFKDYGGNDRVLLF 262 V D G DR++ Sbjct: 262 HAHVEVVFDINGKDRMVFA 280 >gi|319939133|ref|ZP_08013497.1| protoporphyrinogen oxidase [Streptococcus anginosus 1_2_62CV] gi|319812183|gb|EFW08449.1| protoporphyrinogen oxidase [Streptococcus anginosus 1_2_62CV] Length = 276 Score = 266 bits (680), Expect = 3e-69, Method: Composition-based stats. Identities = 79/247 (31%), Positives = 126/247 (51%), Gaps = 8/247 (3%) Query: 16 GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75 LS Q ++ + + L + L H I+G +F+ + PR Sbjct: 33 NLSFTQFVLKMQAEATEDDIELLKKIQSQLLVHRPAQYIIGNAEFHGHSFKVDERVLIPR 92 Query: 76 PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135 PETE LV+ L+ + + +++LD+GTG+GA+ L+L E ++ DIS AL+ Sbjct: 93 PETEELVNLILSEN-----QNSSLKVLDIGTGSGAIALSLAAERANWQVTASDISQDALD 147 Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195 +A+ NA + D +QSD F ++ G +D+IVSNPPYI + +GL V +P ++ Sbjct: 148 LAQENAEA--IDVAIDFVQSDCFQAITGKYDIIVSNPPYISETDREEVGLNVLASEPHLA 205 Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDYG 254 L DG + YR IA+ +HL + G +EIGY Q V +IFES + +D Sbjct: 206 LFAEEDGYAVYRKIAENAQKHLTEKGKIYLEIGYKQGEHVKKIFESAFPKMRIRILQDQF 265 Query: 255 GNDRVLL 261 G DR+++ Sbjct: 266 GKDRMVV 272 >gi|85713813|ref|ZP_01044803.1| modification methylase HemK [Nitrobacter sp. Nb-311A] gi|85699717|gb|EAQ37584.1| modification methylase HemK [Nitrobacter sp. Nb-311A] Length = 298 Score = 266 bits (680), Expect = 3e-69, Method: Composition-based stats. Identities = 104/263 (39%), Positives = 142/263 (53%), Gaps = 1/263 (0%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A ++ V GL ++ LD+ L R L E + RILG ++F+ Sbjct: 29 AALEARMLTGAVLGLDLTGLVAQGLRQLDEDDAARLDAFARRRLAGEPLARILGTKEFWG 88 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L LSSDT PR +TE +V++AL + +RI DLGTG+GA+ LALL E P Sbjct: 89 LPLKLSSDTLVPRADTETVVETALDILRAEGRMQAALRIADLGTGSGAILLALLTELPAA 148 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182 GVG D+S AL+ AK+NA G++ R L SD+ + + G FD+IVSNPPYI S + Sbjct: 149 TGVGTDLSAAALDTAKTNAQDVGLATRAQFLVSDYGNGLSGPFDLIVSNPPYIRSADIAT 208 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 L EVRD DP ++LDGG DGL YR IA L GL +EIG Q V R+ + Sbjct: 209 LAPEVRDHDPPLALDGGRDGLDAYRRIAPQALSLLADGGLLVLEIGQGQDSAVSRLMAAA 268 Query: 243 KLFLV-NAFKDYGGNDRVLLFCR 264 L ++ +A D G R ++ R Sbjct: 269 GLTVMGSARTDLAGIGRAVVARR 291 >gi|110597726|ref|ZP_01386010.1| modification methylase, HemK family [Chlorobium ferrooxidans DSM 13031] gi|110340633|gb|EAT59113.1| modification methylase, HemK family [Chlorobium ferrooxidans DSM 13031] Length = 297 Score = 266 bits (680), Expect = 3e-69, Method: Composition-based stats. Identities = 77/266 (28%), Positives = 119/266 (44%), Gaps = 8/266 (3%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 + + L V G S ++ + + + + L+ + ILG + FY Sbjct: 27 EPRLSAELLLGSVIGKSRLELYLQYSRPVYQDELDRFRALCRQRLEGRPVQYILGEQCFY 86 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALLKESP 120 + ++ PRPETELLV+ AL ILD+GTG+G + + + K P Sbjct: 87 GLEYSVDERVLIPRPETELLVEQALESLGYSSRGGPGEANILDIGTGSGCIAVTMAKLCP 146 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV------EGLFDVIVSNPPY 174 VD S AL +A+ NA +GV R + +D G F +I+SNPPY Sbjct: 147 ALTATAVDCSLDALAVARRNAGRHGVESRISFVTADMLDDHFSEKISTGPFTLILSNPPY 206 Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234 I D L EVRD++P+++L +G YR++A ++ L G E+ + V Sbjct: 207 IPEGEWDSLQKEVRDYEPKLALTT-PNGFECYRSVAGQAAKLLTAGGKLFFELHADGAVL 265 Query: 235 VVRIFESRKLFLVNAFKDYGGNDRVL 260 V I +S + KDY G DRV+ Sbjct: 266 VSEIMKSHGFSALTVTKDYSGLDRVI 291 >gi|114319434|ref|YP_741117.1| HemK family modification methylase [Alkalilimnicola ehrlichii MLHE-1] gi|114225828|gb|ABI55627.1| [protein release factor]-glutamine N5-methyltransferase [Alkalilimnicola ehrlichii MLHE-1] Length = 295 Score = 266 bits (680), Expect = 3e-69, Method: Composition-based stats. Identities = 84/249 (33%), Positives = 126/249 (50%), Gaps = 6/249 (2%) Query: 16 GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75 G + P+ + R L E + + G R F+++ L ++++T PR Sbjct: 50 GRDRAFFLAHPEHRPPASSLARFRQLLARRLAGEPVAHLTGRRGFWSLELKVTAETLIPR 109 Query: 76 PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135 PETELLV++ALA R++ +R+ DLGTGTGA+ LAL E P ++ V+ S AL Sbjct: 110 PETELLVEAALA----RVDGDRQLRVADLGTGTGAIALALADECPAWRVTAVEASAGALV 165 Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194 +A+ NA G+++R + WF + G FD++VSNPPY+ + +VR F+PR Sbjct: 166 VARENARRLGLADRVQVVAGSWFGPLAGERFDLVVSNPPYVGVHEPELYEGDVR-FEPRS 224 Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYG 254 +L G DGL R I HL G VE G+ Q V R+F V +D Sbjct: 225 ALAAGRDGLGDLRRIVGEAPGHLVAGGWLMVEHGFQQGEAVRRLFLEAGFGGVETLRDLA 284 Query: 255 GNDRVLLFC 263 G++RV + Sbjct: 285 GHERVTVGR 293 >gi|299531472|ref|ZP_07044878.1| modification methylase, HemK family protein [Comamonas testosteroni S44] gi|298720435|gb|EFI61386.1| modification methylase, HemK family protein [Comamonas testosteroni S44] Length = 285 Score = 266 bits (680), Expect = 3e-69, Method: Composition-based stats. Identities = 76/267 (28%), Positives = 115/267 (43%), Gaps = 14/267 (5%) Query: 3 ALRDSHSFLCRVTGLS---SHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRD 59 A D+ L + +I L Q+ + + + + G ++ Sbjct: 24 ARVDAQMLLLHLMQQPAHARAWLITHDGDGLSAEQQARWAQLCAQRQQGAPVAYLTGSKE 83 Query: 60 FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119 FY + L + S +PRP+TE LVD AL + + R++DLGTG+GA+ LAL + Sbjct: 84 FYGLDLAVDSRVLDPRPDTETLVDWALEL----LPEGAAHRVVDLGTGSGAIALALQSQR 139 Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL--FDVIVSNPPYIES 177 P + + VD S AL +A SNA + +F W ++G D+IVSNPPYI + Sbjct: 140 PSARVIAVDASADALAVASSNAARLQLPVQFA--HGSWLQPLDGQEPVDLIVSNPPYIRA 197 Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237 +P +L G DGL R+I D L G E G++Q DV + Sbjct: 198 DDPHL---AALTHEPLSALASGADGLEDIRSIIDQAPARLKDGGWLLFEHGWDQAEDVAQ 254 Query: 238 IFESRKLFLVNAFKDYGGNDRVLLFCR 264 + ++ V D G R CR Sbjct: 255 LMQAAGFEQVQHRHDLAGIARCTGGCR 281 >gi|289765719|ref|ZP_06525097.1| methyltransferase [Fusobacterium sp. D11] gi|289717274|gb|EFD81286.1| methyltransferase [Fusobacterium sp. D11] Length = 370 Score = 266 bits (680), Expect = 3e-69, Method: Composition-based stats. Identities = 77/267 (28%), Positives = 139/267 (52%), Gaps = 8/267 (2%) Query: 1 MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTN-AIVRSLKHESIHRILGWRD 59 + L D+ V ++ + + + + + ++R+ K + + ILG + Sbjct: 89 LSPLLDTEYIFSDVLKVNKNTLKYSMSREIKKEDKDKIREMLVLRAKKRKPLQYILGEWE 148 Query: 60 FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119 FY + ++ PR +TE+LV+ + E ILD+G+G+GA+ +A+ E Sbjct: 149 FYGLPFKVNEGVLIPRADTEILVEQCIQLMREVEEPN----ILDIGSGSGAISIAIANEL 204 Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIES 177 G+DI+ KA+++A N + N + E + ++S+ F ++ +D+IVSNPPYI Sbjct: 205 KSSSITGIDINEKAIKLANENKILNKI-ENVNFIESNLFEKLDKDFKYDLIVSNPPYISK 263 Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237 + L EV++++P+ +L DGL YR I+ +L G + EIGYNQ DV + Sbjct: 264 EEYETLMPEVKNYEPQNALTDLGDGLYFYREISKLAGEYLKDTGYLAYEIGYNQAKDVTK 323 Query: 238 IFESRKLFLVNAFKDYGGNDRVLLFCR 264 I ++ +++ KDYGGNDRV++ + Sbjct: 324 ILQNNNFDILSVIKDYGGNDRVVIAKK 350 Score = 40.1 bits (93), Expect = 0.36, Method: Composition-based stats. Identities = 3/45 (6%), Positives = 17/45 (37%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK 47 ++ + V L + + + L + ++ + + + ++ Sbjct: 9 PRLEAEKLVSYVLNLDRIALYIHYERELSEDEKTSIKQYLKKMVE 53 >gi|256027763|ref|ZP_05441597.1| methyltransferase [Fusobacterium sp. D11] Length = 383 Score = 266 bits (680), Expect = 3e-69, Method: Composition-based stats. Identities = 77/267 (28%), Positives = 139/267 (52%), Gaps = 8/267 (2%) Query: 1 MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTN-AIVRSLKHESIHRILGWRD 59 + L D+ V ++ + + + + + ++R+ K + + ILG + Sbjct: 102 LSPLLDTEYIFSDVLKVNKNTLKYSMSREIKKEDKDKIREMLVLRAKKRKPLQYILGEWE 161 Query: 60 FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119 FY + ++ PR +TE+LV+ + E ILD+G+G+GA+ +A+ E Sbjct: 162 FYGLPFKVNEGVLIPRADTEILVEQCIQLMREVEEPN----ILDIGSGSGAISIAIANEL 217 Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIES 177 G+DI+ KA+++A N + N + E + ++S+ F ++ +D+IVSNPPYI Sbjct: 218 KSSSITGIDINEKAIKLANENKILNKI-ENVNFIESNLFEKLDKDFKYDLIVSNPPYISK 276 Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237 + L EV++++P+ +L DGL YR I+ +L G + EIGYNQ DV + Sbjct: 277 EEYETLMPEVKNYEPQNALTDLGDGLYFYREISKLAGEYLKDTGYLAYEIGYNQAKDVTK 336 Query: 238 IFESRKLFLVNAFKDYGGNDRVLLFCR 264 I ++ +++ KDYGGNDRV++ + Sbjct: 337 ILQNNNFDILSVIKDYGGNDRVVIAKK 363 Score = 40.1 bits (93), Expect = 0.36, Method: Composition-based stats. Identities = 3/45 (6%), Positives = 17/45 (37%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK 47 ++ + V L + + + L + ++ + + + ++ Sbjct: 22 PRLEAEKLVSYVLNLDRIALYIHYERELSEDEKTSIKQYLKKMVE 66 >gi|15900892|ref|NP_345496.1| HemK protein [Streptococcus pneumoniae TIGR4] gi|111658250|ref|ZP_01408942.1| hypothetical protein SpneT_02000564 [Streptococcus pneumoniae TIGR4] gi|14972494|gb|AAK75136.1| HemK protein [Streptococcus pneumoniae TIGR4] Length = 279 Score = 266 bits (680), Expect = 3e-69, Method: Composition-based stats. Identities = 80/248 (32%), Positives = 120/248 (48%), Gaps = 9/248 (3%) Query: 16 GLSSHQVIVDPDSVLD-DRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEP 74 LS I + + ++ F+ + + H+ I+G DFY + L + P Sbjct: 33 NLSFTDFIFALQQEVTTEEEKQFVEDIYQQLAAHKPAQYIIGQADFYGMHLKVDERVLIP 92 Query: 75 RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134 RPETE LV+ LA + + +LD+GTG+GA+ LAL K P + DIS AL Sbjct: 93 RPETEELVELILAEN-----PVKNLMVLDIGTGSGAIALALAKNRPDWSVTAADISQDAL 147 Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194 ++A NA + + +SD F+ + +D+IVSNPPYI +GL V +P + Sbjct: 148 DVASENAKNQNL--QIFLKKSDCFTEISEKYDIIVSNPPYISREDESEVGLNVLYSEPHL 205 Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDY 253 +L DGL+ YR IA+ +L G +EIGY Q V +F V KD Sbjct: 206 ALFADEDGLAIYRRIAEDAKDYLKDGGKIYLEIGYKQGQSVPELFRKHLPEKRVRTLKDQ 265 Query: 254 GGNDRVLL 261 G DR+++ Sbjct: 266 FGQDRMVV 273 >gi|229153492|ref|ZP_04281670.1| Protein hemK [Bacillus cereus m1550] gi|228630096|gb|EEK86747.1| Protein hemK [Bacillus cereus m1550] Length = 283 Score = 265 bits (679), Expect = 3e-69, Method: Composition-based stats. Identities = 71/259 (27%), Positives = 116/259 (44%), Gaps = 7/259 (2%) Query: 8 HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67 LC V ++ ++++ + + Q T I + ++ I ++G+ FY + Sbjct: 25 EIVLCHVLKVNRTGLLMNMREEITEEQEKSFTEFIHKHVEGIPIQYMIGYEMFYGRSFFV 84 Query: 68 SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 + + PRPETE L+ L + + + D+GTG+GA+ + L E+ V Sbjct: 85 NEEVLIPRPETEELIVGVLERIERHF-GDEKLHVADIGTGSGAISITLALENKNLHVYTV 143 Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG---LFDVIVSNPPYIESVIVDCLG 184 DI+ +++E+AK NA G D S DV+VSNPPYI L Sbjct: 144 DIAQESIEVAKENAKALGAE--VTFYHGDLLSPFHKTGQKLDVVVSNPPYIPEEDWRGLS 201 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-K 243 V++ +P+ +L GG DGL YR + + L K + + EIG Q DV R+ + Sbjct: 202 PVVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEIGVGQGEDVKRLLQQAFP 261 Query: 244 LFLVNAFKDYGGNDRVLLF 262 V D G DR++ Sbjct: 262 HAHVEVVFDINGKDRMVFA 280 >gi|83953607|ref|ZP_00962328.1| modification methylase, HemK family protein [Sulfitobacter sp. NAS-14.1] gi|83841552|gb|EAP80721.1| modification methylase, HemK family protein [Sulfitobacter sp. NAS-14.1] Length = 280 Score = 265 bits (679), Expect = 3e-69, Method: Composition-based stats. Identities = 93/259 (35%), Positives = 129/259 (49%), Gaps = 8/259 (3%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 RD+ L + + +V + + I + ++G R FY Sbjct: 24 DPARDARILLAHAASVDAARVTLIAPEEIAPDIAERYEKLIALRAVRVPVSHLVGQRAFY 83 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 +S D +PRPETE L++ AL+ R+LDLGTG+G + + LL E Sbjct: 84 GRDFKVSRDVLDPRPETESLIELALS--------EPFERVLDLGTGSGCILVTLLAEQQD 135 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181 +GVG+D+S A A +NAV +GV R + QSDWFS+ EG FD+IVSNPPY+ + Sbjct: 136 ARGVGLDLSEAACLQASANAVLHGVQARAEITQSDWFSAAEGRFDLIVSNPPYLAQSEMA 195 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 + E+R +P ++L G DGLS YR IA +L G EIG+ Q DV IFE+ Sbjct: 196 DVSPELRLHEPEMALTDGQDGLSVYRIIAAQAQGYLAPTGRVLAEIGWQQGADVKAIFEA 255 Query: 242 RKLFLVNAFKDYGGNDRVL 260 V D GG DRVL Sbjct: 256 AGWGRVRILPDLGGRDRVL 274 >gi|262282282|ref|ZP_06060050.1| protoporphyrinogen oxidase [Streptococcus sp. 2_1_36FAA] gi|262261573|gb|EEY80271.1| protoporphyrinogen oxidase [Streptococcus sp. 2_1_36FAA] Length = 276 Score = 265 bits (679), Expect = 3e-69, Method: Composition-based stats. Identities = 83/262 (31%), Positives = 129/262 (49%), Gaps = 11/262 (4%) Query: 3 ALRDSHSF--LCRVTG-LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRD 59 A ++ S + R LS ++ + + +R L + L H+ I+G D Sbjct: 17 AGEEAESLSFVYRALNQLSFTDFVLKLRAEVSQEEREELKVIKKQLLAHKPAQYIIGSSD 76 Query: 60 FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119 F+ + L + PRPETE LV+ L+ + V +LD+GTG+GA+ LAL Sbjct: 77 FHGLNLKVDERVLIPRPETEELVELILSEN-----PESSVSVLDIGTGSGAIALALANSR 131 Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179 P ++ D+S AL +A+ NA + G+S +QSD +++G FD+IVSNPPYI Sbjct: 132 PDWQITASDLSEDALSLARENARSCGLS--LTFVQSDCLDAIQGNFDIIVSNPPYISEAD 189 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 D +GL V +P ++L DG YR I + +L + G +EIGY Q VV + Sbjct: 190 KDEVGLNVLTSEPHMALFAEEDGYEVYRKITEQAGDYLTEKGKIYLEIGYKQGDGVVDLL 249 Query: 240 ES-RKLFLVNAFKDYGGNDRVL 260 + + KD G DR++ Sbjct: 250 KQFFPQKRIRVLKDQFGKDRMV 271 >gi|161526058|ref|YP_001581070.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Burkholderia multivorans ATCC 17616] gi|189349227|ref|YP_001944855.1| HemK protein [Burkholderia multivorans ATCC 17616] gi|160343487|gb|ABX16573.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Burkholderia multivorans ATCC 17616] gi|189333249|dbj|BAG42319.1| HemK protein [Burkholderia multivorans ATCC 17616] Length = 280 Score = 265 bits (679), Expect = 4e-69, Method: Composition-based stats. Identities = 84/261 (32%), Positives = 123/261 (47%), Gaps = 11/261 (4%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L G + Q+I D LD R E + +++G R+F+ Sbjct: 19 DARVLLAHALGWTRTQLITRGDRPLDAEAVERYRALEARRAAGEPVAQLVGMREFFGRPF 78 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 ++ D PRPETELLV++AL I+ +LDLGTG+GA+ +++ E P + Sbjct: 79 DVTPDVLIPRPETELLVEAALD----AIDGLAHPAVLDLGTGSGAIAVSIAAERPDARVW 134 Query: 126 GVDISCKALEIAKSNAVTNGVSER----FDTLQSDWFSSVEG--LFDVIVSNPPYIESVI 179 +D S AL +A+ NA + R LQSDW+++++ FD IVSNPPYI Sbjct: 135 ALDRSAAALAVAQRNADKLLDARRPGGPLQWLQSDWYAALDPALAFDAIVSNPPYIAQHD 194 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 ++R F+PR +L DGLS RTI G HL G +E GY+Q V + Sbjct: 195 PHLSQGDLR-FEPRGALTDDADGLSAIRTIVAGARAHLKPGGTLWIEHGYDQAEAVRALL 253 Query: 240 ESRKLFLVNAFKDYGGNDRVL 260 S V + D +R Sbjct: 254 ASHGFDAVESLADLAAIERTT 274 >gi|92116090|ref|YP_575819.1| HemK family modification methylase [Nitrobacter hamburgensis X14] gi|91798984|gb|ABE61359.1| [protein release factor]-glutamine N5-methyltransferase [Nitrobacter hamburgensis X14] Length = 317 Score = 265 bits (679), Expect = 4e-69, Method: Composition-based stats. Identities = 103/263 (39%), Positives = 136/263 (51%), Gaps = 1/263 (0%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 D+ L +I L L R L E + RILG +DF+ Sbjct: 52 PALDARMLTGAALHLDLTGLIAQGPRQLTADDAACLDAFARRRLAGEPVARILGTKDFWG 111 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L LS+DT PRP+TE +V++AL R +RI DLGTG+GA+ LALL E P Sbjct: 112 LPLKLSADTLVPRPDTETVVEAALEILRAEGRTRTPLRIADLGTGSGAILLALLSELPDA 171 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182 GVG D+S AL+ AK+NA G++ R D SD+ + FD+IVSNPPYI S + Sbjct: 172 TGVGTDLSAAALDTAKANAQRLGLAPRADFTVSDYAGGLSDPFDLIVSNPPYIRSADIAS 231 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 L EVRD DP ++LDGG DGL YR IA + L GL +E+G Q DVVR+ + Sbjct: 232 LAPEVRDHDPHLALDGGSDGLEAYRRIAPQAAGLLAPGGLLVLEVGQGQDGDVVRLVAAA 291 Query: 243 KLFLVN-AFKDYGGNDRVLLFCR 264 L + A D G R + + Sbjct: 292 GLTVAGPARADLAGIGRAVAARK 314 >gi|322391879|ref|ZP_08065344.1| protein-(glutamine-N5) methyltransferase [Streptococcus peroris ATCC 700780] gi|321145359|gb|EFX40755.1| protein-(glutamine-N5) methyltransferase [Streptococcus peroris ATCC 700780] Length = 276 Score = 265 bits (679), Expect = 4e-69, Method: Composition-based stats. Identities = 81/260 (31%), Positives = 122/260 (46%), Gaps = 11/260 (4%) Query: 6 DSHSF--LCRVT-GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 ++ S + R+ LS I + ++ F+ + + + H I+G +FY Sbjct: 20 EAESLSFVYRILKNLSFTDFIFAIQQEITPEEKEFVESIYKQLVAHVPAQYIIGHAEFYG 79 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L + PRPETE LV+ L + + +LD+GTG+GA+ LAL K P + Sbjct: 80 MELKVDERVLIPRPETEELVELILTEN-----PNPNLSVLDIGTGSGAIALALAKNRPDW 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182 DIS AL +A NA + + +SD F + +D+IVSNPPYI Sbjct: 135 CVTASDISPDALNLASENAKLQDL--KISFKKSDCFEEITENYDIIVSNPPYISRADESE 192 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 +GL V +P ++L DGL+ YR IA HL + G +EIGY Q V +F Sbjct: 193 VGLNVLHSEPHLALFAEEDGLAIYRKIAQEAKHHLREGGEIYLEIGYKQGHSVPALFRKY 252 Query: 243 -KLFLVNAFKDYGGNDRVLL 261 V KD G DR+++ Sbjct: 253 LPEKRVRTLKDQFGQDRMVV 272 >gi|307706537|ref|ZP_07643344.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptococcus mitis SK321] gi|307617992|gb|EFN97152.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptococcus mitis SK321] Length = 278 Score = 265 bits (679), Expect = 4e-69, Method: Composition-based stats. Identities = 80/247 (32%), Positives = 120/247 (48%), Gaps = 8/247 (3%) Query: 16 GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75 LS + ++ ++ F+ + H+ I+G DFY ++LT+ PR Sbjct: 33 NLSFTDFVFALQQEVNKEEKQFVKGIFQQLAAHKPAQYIIGQTDFYGMQLTVDERVLIPR 92 Query: 76 PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135 PETE LV LA + + +LD+GTG+GA+ LAL K P + DIS AL+ Sbjct: 93 PETEELVGLILAEN-----PETNLSVLDIGTGSGAIALALAKNRPDWSVTAADISQDALD 147 Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195 +A NA + + +SD F+ + +D+IVSNPPYI +GL V +P ++ Sbjct: 148 LANENAKNQNL--QIFLKKSDCFTEISEKYDIIVSNPPYISREDESEVGLNVLHSEPHLA 205 Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDYG 254 L DGL+ YR IA+ +L G +EIGY Q V +F V KD Sbjct: 206 LFADEDGLAIYRRIAEDAKDYLKDGGKIYLEIGYKQGQSVPELFRKHLPEKRVRTLKDQF 265 Query: 255 GNDRVLL 261 G DR+++ Sbjct: 266 GQDRMVV 272 >gi|21230309|ref|NP_636226.1| protoporphyrinogen oxidase [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66769697|ref|YP_244459.1| protoporphyrinogen oxidase [Xanthomonas campestris pv. campestris str. 8004] gi|21111859|gb|AAM40150.1| protoporphyrinogen oxidase [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66575029|gb|AAY50439.1| protoporphyrinogen oxidase [Xanthomonas campestris pv. campestris str. 8004] Length = 283 Score = 265 bits (679), Expect = 4e-69, Method: Composition-based stats. Identities = 79/262 (30%), Positives = 118/262 (45%), Gaps = 7/262 (2%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A D+ L G + + Q + R + E + + G R F+ Sbjct: 22 ARSDAEPLLLHALGRDRAWLFAHGRDPVPAEQAQRFGALVERRHQGEPVAYLTGSRGFWT 81 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +S+ T PR +TE LV+ AL R+E VR++DLGTG+GA+ LA+ E P Sbjct: 82 LDLAVSTATLIPRADTETLVELALE----RLELTAGVRVVDLGTGSGAIALAIASERPQA 137 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181 + + D S AL IA+ NA +G+ + W + G FD+I SNPPYI + Sbjct: 138 QLIATDASADALAIARHNAHAHGL-HNVECRLGHWLQPLAGERFDLIASNPPYIAAADPH 196 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 ++R ++P +L G DGL R I HL G +E G++Q V + + Sbjct: 197 LQQGDLR-YEPASALASGSDGLDDIRLIVADTPAHLLAGGWLLLEHGWDQGEAVAALLIA 255 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 R V +D DRV L Sbjct: 256 RGFAAVATHQDLEQRDRVTLGQ 277 >gi|193077722|gb|ABO12580.2| methyl transferase [Acinetobacter baumannii ATCC 17978] Length = 273 Score = 265 bits (679), Expect = 4e-69, Method: Composition-based stats. Identities = 80/255 (31%), Positives = 121/255 (47%), Gaps = 10/255 (3%) Query: 9 SFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLS 68 L ++S ++ + L +Q + R E + + G + F+ + L ++ Sbjct: 23 WLLEHFLKINSLELKFRLEQELTAQQEQDYLAGLERIQNGEPLAYVTGSQPFWTLDLKVT 82 Query: 69 SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128 SDT PRP+TE+L+++ L +LP+ I+DLGTGTGA+ LAL E P + D Sbjct: 83 SDTLVPRPDTEVLIETVLNLNLPK-----NANIVDLGTGTGAIALALASERPNWFVTATD 137 Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEV 187 I L++AK NA T+G+ WF ++E FD+IVSNPPYI+ + Sbjct: 138 IYAPTLDVAKENAQTHGL-HHVKFACGAWFEALEPQQFDLIVSNPPYIDPEDEHM---QA 193 Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLV 247 +PR +L GL+ I L G ++E GY+Q V IF + Sbjct: 194 LATEPRRALVADHHGLADIEIIIAQGKNWLKPQGWIALEHGYDQGQAVRGIFAEHGFSEI 253 Query: 248 NAFKDYGGNDRVLLF 262 +DYG NDRV L Sbjct: 254 KTIQDYGQNDRVTLA 268 >gi|187925495|ref|YP_001897137.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Burkholderia phytofirmans PsJN] gi|187716689|gb|ACD17913.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Burkholderia phytofirmans PsJN] Length = 286 Score = 265 bits (679), Expect = 4e-69, Method: Composition-based stats. Identities = 87/261 (33%), Positives = 130/261 (49%), Gaps = 11/261 (4%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 ++ L V G Q+I D LD + R + E + +++G R+F+ + Sbjct: 24 LEARILLTHVLGWRPTQLITRSDEALDGKLVERYQTLEARRVAGEPVAQLVGAREFFGLD 83 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 ++ PRPETELLVD+AL +E R+LDLGTGTGA+ +A+ P + Sbjct: 84 FEVTPHVLIPRPETELLVDTAL----SALENLVRPRVLDLGTGTGAIAVAIASMRPDARV 139 Query: 125 VGVDISCKALEIAKSNAVTNGVSER----FDTLQSDWFSSVEG--LFDVIVSNPPYIESV 178 +D S +AL +A NA ++R QSDW+ S++ FDVIVSNPPYI S Sbjct: 140 WALDRSAEALAVATRNAARLLDAQRPGGAVVLTQSDWYDSLDAALRFDVIVSNPPYIASG 199 Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238 ++R F+PR +L DGLS R I G L DG+ +E GY+Q V + Sbjct: 200 DPHLYEGDLR-FEPRGALTDEADGLSAIRAIIAGAPTRLAADGVLWIEHGYDQAEAVRAL 258 Query: 239 FESRKLFLVNAFKDYGGNDRV 259 ++ V + +D G +R+ Sbjct: 259 LTAQGFAQVRSERDLAGIERI 279 >gi|254465042|ref|ZP_05078453.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Rhodobacterales bacterium Y4I] gi|206685950|gb|EDZ46432.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Rhodobacterales bacterium Y4I] Length = 283 Score = 265 bits (678), Expect = 4e-69, Method: Composition-based stats. Identities = 96/259 (37%), Positives = 130/259 (50%), Gaps = 8/259 (3%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 RD+ L + + +V + L I + ++G R+FY Sbjct: 23 DPARDARVLLAHAARIEASRVTLIAPEELAPEVAERYEQLIALRAVRVPVSHLIGEREFY 82 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 R +S D +PRPETE+L+++ALA R+LDLG G+G + + LL E Sbjct: 83 GRRFKVSRDVLDPRPETEILIEAALA--------EPYSRVLDLGVGSGCILVTLLAERQE 134 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181 G+GVDIS A A +NAV + V R D QSDWF VEG FD+IVSNPPYI ++ Sbjct: 135 ATGLGVDISEAACLQASANAVLHRVQARADIRQSDWFEGVEGQFDLIVSNPPYIALDEME 194 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 L EVR +P I+L G DGL YR IA V+ HL G +EIG +Q V + E Sbjct: 195 GLSAEVRGHEPGIALTDGGDGLGAYRRIAAQVTGHLAPGGRVLLEIGPSQGRAVSALLEE 254 Query: 242 RKLFLVNAFKDYGGNDRVL 260 L + +D G DRV+ Sbjct: 255 AGLSGIAVLQDLDGRDRVV 273 >gi|260554586|ref|ZP_05826807.1| protein-(glutamine-N5) methyltransferase, release factor-specific protein [Acinetobacter baumannii ATCC 19606] gi|260411128|gb|EEX04425.1| protein-(glutamine-N5) methyltransferase, release factor-specific protein [Acinetobacter baumannii ATCC 19606] Length = 273 Score = 265 bits (678), Expect = 4e-69, Method: Composition-based stats. Identities = 80/255 (31%), Positives = 122/255 (47%), Gaps = 10/255 (3%) Query: 9 SFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLS 68 L ++S ++ + L +Q + R E + + G + F+ + L ++ Sbjct: 23 WLLEHFLKINSLELKFRLEQELTAQQEQDYLAGLERIQNGEPLAYVTGSQPFWTLDLKVT 82 Query: 69 SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128 SDT PRP+TE+LV++ L +LP+ I+DLGTGTGA+ LAL E P + D Sbjct: 83 SDTLVPRPDTEVLVETVLNLNLPK-----NANIVDLGTGTGAIALALASERPDWFVTATD 137 Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEV 187 I L++AK NA T+G+ WF ++E FD+IVSNPPYI+ + Sbjct: 138 IYAPTLDVAKENAQTHGL-HHVKFACGAWFEALEPQQFDLIVSNPPYIDPEDEHM---QA 193 Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLV 247 +PR +L GL+ I L G ++E GY+Q V +F + + Sbjct: 194 LATEPRRALVADHHGLADIEIIIAQGKNWLKPQGWIALEHGYDQGQAVRNVFAAHGFSEI 253 Query: 248 NAFKDYGGNDRVLLF 262 +DYG NDRV L Sbjct: 254 KTIQDYGQNDRVTLA 268 >gi|325267515|ref|ZP_08134168.1| protein methyltransferase HemK [Kingella denitrificans ATCC 33394] gi|324981040|gb|EGC16699.1| protein methyltransferase HemK [Kingella denitrificans ATCC 33394] Length = 311 Score = 265 bits (678), Expect = 5e-69, Method: Composition-based stats. Identities = 81/264 (30%), Positives = 117/264 (44%), Gaps = 12/264 (4%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 ++ L +TGLS Q+I +L Q R + E + +LG R+FY Sbjct: 56 PRLETRLLLQHITGLSHSQLITRDGDLLPPEQEAQWRQLCRRREQGEPVAYLLGSREFYG 115 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 ++ PRPETE L+++AL + D+GTG+G + ++ E P Sbjct: 116 RTFAVNRHVLIPRPETEHLLEAALCRL------PAGGALWDMGTGSGIIAVSAKLERPDA 169 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG---LFDVIVSNPPYIESVI 179 DIS AL +A+ NA T + F Q WF + + +DVIVSNPPYI + Sbjct: 170 DVFASDISADALAVAQYNAQTLKAACTFA--QGSWFEAQKQPARQWDVIVSNPPYIRADD 227 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 ++R F+P +L DGL H R I +HL G +E GY+Q D+ R+F Sbjct: 228 PHLAQGDLR-FEPEGALTDFADGLQHIRHIVAQAPQHLKTGGYLLLEHGYDQAADIRRLF 286 Query: 240 ESRKLFLVNAFKDYGGNDRVLLFC 263 D G DRV L Sbjct: 287 AQHGYRHCETLLDLAGLDRVTLAQ 310 >gi|83942387|ref|ZP_00954848.1| modification methylase, HemK family protein [Sulfitobacter sp. EE-36] gi|83846480|gb|EAP84356.1| modification methylase, HemK family protein [Sulfitobacter sp. EE-36] Length = 280 Score = 265 bits (678), Expect = 5e-69, Method: Composition-based stats. Identities = 93/259 (35%), Positives = 129/259 (49%), Gaps = 8/259 (3%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 RD+ L + + +V + + I + ++G R FY Sbjct: 24 DPARDARILLAHAASVDAARVTLIAPEEIAPDIAERYEKLIALRAVRVPVSHLVGQRAFY 83 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 +S D +PRPETE L++ AL+ R+LDLGTG+G + + LL E Sbjct: 84 GRDFKVSRDVLDPRPETESLIELALSERFE--------RVLDLGTGSGCILVTLLAEQQD 135 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181 +GVG+D+S A A +NAV +GV R + QSDWFS+ EG FD+IVSNPPY+ + Sbjct: 136 ARGVGLDLSEAACLQASANAVLHGVQARAEIKQSDWFSAAEGRFDLIVSNPPYLAQSEMA 195 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 + E+R +P ++L G DGLS YR IA +L G EIG+ Q DV IFE+ Sbjct: 196 DVSPELRLHEPEMALTDGQDGLSVYRIIAAQAQGYLTPTGRVLAEIGWQQGADVKAIFEA 255 Query: 242 RKLFLVNAFKDYGGNDRVL 260 V D GG DRVL Sbjct: 256 AGWGRVRILPDLGGRDRVL 274 >gi|317153067|ref|YP_004121115.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Desulfovibrio aespoeensis Aspo-2] gi|316943318|gb|ADU62369.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Desulfovibrio aespoeensis Aspo-2] Length = 284 Score = 265 bits (678), Expect = 5e-69, Method: Composition-based stats. Identities = 85/265 (32%), Positives = 128/265 (48%), Gaps = 14/265 (5%) Query: 7 SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66 + + V GL+ + ++ D L + + + R E + +LG R+FY + + Sbjct: 26 AQVLVAEVLGLTRLGLSLERDRALTPEETDRIRSLAARRASGEPLAYLLGRREFYGLDFS 85 Query: 67 LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126 ++ D PRPETE ++++ L VR DLGTG+G + + L P G+ Sbjct: 86 VTPDVLIPRPETEHVIEAVLN----AFSPDTPVRFADLGTGSGILAVTLAHCFPHATGLA 141 Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVDCLG 184 VD+S AL +A+ NA +GV +R +Q D+ + +G FD+IVSNPPY+ + Sbjct: 142 VDLSGPALAVARRNARAHGVHDRIAFVQGDFTGPILGKGRFDLIVSNPPYVTDEEFERAS 201 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV-----VRIF 239 EV F+PR +L G DGL H R + L GL +EIG Q V + Sbjct: 202 REVTGFEPRTALVSGPDGLDHIRAMLPRALEALRPGGLLLMEIGCGQVEGVNIITSNQCL 261 Query: 240 ESRKLFLVNAFKDYGGNDRVLLFCR 264 ESR V KD G+DRV+ R Sbjct: 262 ESR---DVGVIKDLAGHDRVVSMRR 283 >gi|241664383|ref|YP_002982743.1| modification methylase, HemK family [Ralstonia pickettii 12D] gi|240866410|gb|ACS64071.1| modification methylase, HemK family [Ralstonia pickettii 12D] Length = 300 Score = 265 bits (678), Expect = 5e-69, Method: Composition-based stats. Identities = 79/262 (30%), Positives = 121/262 (46%), Gaps = 11/262 (4%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 ++ + VTGLS Q+I +D R ++ R L E + +LG R+F+ Sbjct: 28 PALEARMLVSHVTGLSRVQLITQDACAIDVAARARISELAARRLAGEPMAYLLGEREFFG 87 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 ++ PRP+TE+LV+ AL R+E+RD +LD+GTG+G + +++ Sbjct: 88 RTFKVTPAVLIPRPDTEVLVEQALD----RLEERDAPAVLDMGTGSGIIAISIALARRDA 143 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-----FDVIVSNPPYIES 177 + D S AL +A NA G + DW+ ++ G FD+I SNPPYI + Sbjct: 144 RVWATDASADALAVAIDNAKALGAT-NVQAALGDWYGALAGTDAPPAFDLIASNPPYIAA 202 Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237 ++R F+P +L DGL H R+I G L G VE GY+Q V Sbjct: 203 TDAHLDQGDLR-FEPASALTDHDDGLRHLRSIVAGAPARLVSGGWLLVEHGYDQGEPVRA 261 Query: 238 IFESRKLFLVNAFKDYGGNDRV 259 + V +D G+DR Sbjct: 262 LLGGAGFANVFTAQDLAGHDRC 283 >gi|254510882|ref|ZP_05122949.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Rhodobacteraceae bacterium KLH11] gi|221534593|gb|EEE37581.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Rhodobacteraceae bacterium KLH11] Length = 285 Score = 265 bits (678), Expect = 5e-69, Method: Composition-based stats. Identities = 92/259 (35%), Positives = 126/259 (48%), Gaps = 8/259 (3%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 RD+ L + + +V + L I + +LG R+FY Sbjct: 25 DPARDARVLLAHAARIEASRVTLIAPEELPVDIAERYDQLISLRAIRVPVSHLLGEREFY 84 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 R +S D +PRPETE L+++AL+ +LDLG G+G + + LL E Sbjct: 85 GRRFKVSRDVLDPRPETEALIEAALS--------EPFDHVLDLGVGSGCILITLLAERAS 136 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181 GVGVD+S A A +NAV + V R + QSDWF ++EG FD+IVSNPPYI + + Sbjct: 137 AAGVGVDLSESACLQASANAVQHQVQGRVEIRQSDWFENIEGQFDLIVSNPPYISADEMQ 196 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 L EVR+ +PRI+L DGL YR IA L G VEIG Q V +F++ Sbjct: 197 ELSPEVREHEPRIALTDEGDGLDAYRRIAAAAPDFLTPGGRILVEIGPTQGAYVSALFDA 256 Query: 242 RKLFLVNAFKDYGGNDRVL 260 L D G DRV+ Sbjct: 257 AGLTGTQVIPDLDGRDRVV 275 >gi|311279354|ref|YP_003941585.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Enterobacter cloacae SCF1] gi|308748549|gb|ADO48301.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Enterobacter cloacae SCF1] Length = 278 Score = 265 bits (678), Expect = 5e-69, Method: Composition-based stats. Identities = 91/262 (34%), Positives = 132/262 (50%), Gaps = 8/262 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 RD+ L VTG S ++ ++ L Q L + R + E + ++G R+F++ Sbjct: 20 PRRDAEILLGHVTGKSRTFILAFDETPLSAEQLDALAGLLARRARGEPVAHLVGMREFWS 79 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +S T PRP+TE LV+ ALA RILDLGTGTGA+ LAL E P Sbjct: 80 LPLFVSPATLIPRPDTECLVEQALARL-----GDAPGRILDLGTGTGAIALALASERPDC 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181 + VD+ A+ +A+ N GV LQS WFS+++G FD+IVSNPPYI+ Sbjct: 135 QLTAVDVVADAVALARRNVAHLGV-NNVQVLQSSWFSALDGQRFDMIVSNPPYIDEQDPH 193 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P+ +L GL+ I +L+ G +E G+ Q V +F Sbjct: 194 LAQGDVR-FEPKTALVAADAGLADLAHIIAQGRCYLSAGGWMLLEHGWQQGAAVRALFAD 252 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 V +DYGGN+R+ L Sbjct: 253 AGYREVETCRDYGGNERLTLGR 274 >gi|83592090|ref|YP_425842.1| modification methylase HemK [Rhodospirillum rubrum ATCC 11170] gi|83575004|gb|ABC21555.1| Modification methylase HemK [Rhodospirillum rubrum ATCC 11170] Length = 325 Score = 265 bits (678), Expect = 5e-69, Method: Composition-based stats. Identities = 105/262 (40%), Positives = 137/262 (52%), Gaps = 5/262 (1%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 RD+ V GLS V++ D V+ + L I R E + RILG R F+ Sbjct: 44 PRRDARLLAGHVLGLSPGAVLLADDRVVTPEEAQALEAVIARRETREPVSRILGHRGFWR 103 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 L L +DT +PRP+TE LV++ LA + RILDLGTG+G + LALL + P Sbjct: 104 FDLALGADTLDPRPDTETLVEAGLAVL-----EGCGGRILDLGTGSGCILLALLADRPGA 158 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182 G+G+DI+ A+ +A NA G+ R DW ++V G FD+IVSNPPYI S + Sbjct: 159 IGLGIDIAPGAVRVALRNARALGLERRALFAVGDWAAAVAGPFDLIVSNPPYIPSADIAA 218 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 L EV FDP +LDGG DGL YR +A V L G+ +VE G Q DV + E Sbjct: 219 LEPEVARFDPSRALDGGADGLDPYRILAAQVPALLAPAGVLAVEFGQGQARDVAGLLEVG 278 Query: 243 KLFLVNAFKDYGGNDRVLLFCR 264 L KD G +R LL R Sbjct: 279 GLCPYEIKKDLSGEERCLLARR 300 >gi|189485188|ref|YP_001956129.1| methylase of polypeptide chain release factors [uncultured Termite group 1 bacterium phylotype Rs-D17] gi|170287147|dbj|BAG13668.1| methylase of polypeptide chain release factors [uncultured Termite group 1 bacterium phylotype Rs-D17] Length = 288 Score = 265 bits (678), Expect = 5e-69, Method: Composition-based stats. Identities = 80/260 (30%), Positives = 132/260 (50%), Gaps = 7/260 (2%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 + D L V ++ + L D Q I+R K E + I+G F Sbjct: 25 EPESDVEVLLSFVLQTKRSKLPLMRSQKLTDIQVLQYERYILRRSKREPVAYIMGLAGFM 84 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 + ++ + PRPETE+LV++AL + +K + +LDL TG+G + ++L K F Sbjct: 85 DFEFKVNKNVLIPRPETEILVETALKIA----KKENKNSVLDLCTGSGCIAVSLAKLGKF 140 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIV 180 + D+S ALEIA+ NA +N V + + ++S+ FS + G FD+I+SNPPY+ Sbjct: 141 KDIMASDVSGSALEIARENARSNNVLD-INFVKSNVFSGISGKNFDIIISNPPYVSHEEY 199 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 D L E++ ++P I+L GL Y+ IA R+LN +G +E+ + ++ +IF Sbjct: 200 DALEPELK-YEPEIALAADDSGLFFYKKIAGKAGRYLNDNGFILIELNAYKAGEIKQIFS 258 Query: 241 SRKLFLVNAFKDYGGNDRVL 260 + + KDY G R+L Sbjct: 259 TCSYKNIEIVKDYAGLPRML 278 >gi|83859677|ref|ZP_00953197.1| hemK family protein [Oceanicaulis alexandrii HTCC2633] gi|83852036|gb|EAP89890.1| hemK family protein [Oceanicaulis alexandrii HTCC2633] Length = 285 Score = 265 bits (678), Expect = 5e-69, Method: Composition-based stats. Identities = 90/262 (34%), Positives = 135/262 (51%), Gaps = 3/262 (1%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 +A D+ L S +++ + S + D + I R + E + ILG + F+ Sbjct: 24 EAADDARRLLLAAFEGSPARLLTEMASEMPDAELERFDALIGRREQREPLSHILGTQPFW 83 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 + L ++ D PR +TE L+++ALA ++R +RILD+ TG+GA+ LALL E P Sbjct: 84 TLELKVTRDVLTPRADTETLIEAALA---AYPDRRAPLRILDIATGSGAIILALLSEFPN 140 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181 G DIS AL +A+ NA G+++R W +EG FD++VSNPPYI + ++D Sbjct: 141 ATGAATDISEAALAVAQENADLTGLADRVSFQHQSWADGLEGPFDLLVSNPPYIATAVID 200 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 L EVR ++PR++L+GG G Y + SR L GL EIGY+Q V Sbjct: 201 ELEPEVRAYEPRMALEGGRTGFEPYPHLFAEASRLLVPGGLALFEIGYDQGVRAREAASE 260 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 KD G+DRV+ Sbjct: 261 AGAKETRILKDLAGHDRVVSLR 282 >gi|296159489|ref|ZP_06842313.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Burkholderia sp. Ch1-1] gi|295890197|gb|EFG69991.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Burkholderia sp. Ch1-1] Length = 281 Score = 265 bits (678), Expect = 5e-69, Method: Composition-based stats. Identities = 84/261 (32%), Positives = 126/261 (48%), Gaps = 11/261 (4%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 ++ L V G Q+I D L R E + +++G R+F+ + Sbjct: 19 LEARILLTHVLGWRPTQLITRSDEPLQAEVVERYRALEARRAAGEPVAQLVGAREFFGLN 78 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 ++ PRPETELLV++ALA +E R+LDLGTGTGA+ +A+ P + Sbjct: 79 FEVTPHVLIPRPETELLVETALA----ALENLARPRVLDLGTGTGAIAVAIASMRPDAQV 134 Query: 125 VGVDISCKALEIAKSNAVTNGVSER----FDTLQSDWFSSVEG--LFDVIVSNPPYIESV 178 +D S +AL +A NA ++R QSDW+ S++ F VIVSNPPYI S Sbjct: 135 WALDRSAEALAVATRNAARLLDAKRPGGAVVLTQSDWYGSLDAALRFHVIVSNPPYIASG 194 Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238 ++R F+PR +L DGLS R I G L G+ +E GY+Q V + Sbjct: 195 DPHLAQGDLR-FEPRGALTDEADGLSAIRAIIAGAPTRLAAGGVVWIEHGYDQAEAVREL 253 Query: 239 FESRKLFLVNAFKDYGGNDRV 259 ++ V + +D G +R+ Sbjct: 254 LTAQGFMQVRSERDLAGIERI 274 >gi|325981710|ref|YP_004294112.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Nitrosomonas sp. AL212] gi|325531229|gb|ADZ25950.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Nitrosomonas sp. AL212] Length = 278 Score = 265 bits (678), Expect = 5e-69, Method: Composition-based stats. Identities = 70/255 (27%), Positives = 132/255 (51%), Gaps = 7/255 (2%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L V ++ ++ PD L +Q ++ + + ++ + ++G R F+++ Sbjct: 21 DAILLLRHVLSVNHAFLLTHPDQALPGQQFEKFSSLVQQRIEGLPVAYLIGKRAFFDLTF 80 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 ++ PRPETELLV+ AL I + ++LDLGTG+GA+ +++ K P + + Sbjct: 81 KVTEAVLIPRPETELLVEWALEL----IPSQKFCKVLDLGTGSGAIGISIAKHRPQSQVI 136 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLG 184 VD+S A+++ +SN V+ + ++ +WF + G FD+IVSNPPY+ Sbjct: 137 AVDLSPAAIDVCQSNVEILEVA-NLNVIRGNWFDELSGEKFDLIVSNPPYVAEDDPHLQQ 195 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 ++R F+P ++L G G++ I + +L K+G +E GYNQ ++ ++ Sbjct: 196 GDLR-FEPEMALSAGEHGMACITHIINAAPGYLGKEGWLLLEHGYNQAEACRQLLRNKDF 254 Query: 245 FLVNAFKDYGGNDRV 259 + ++ D G RV Sbjct: 255 SNICSYPDLAGIMRV 269 >gi|315222985|ref|ZP_07864864.1| protein-(glutamine-N5) methyltransferase [Streptococcus anginosus F0211] gi|315187935|gb|EFU21671.1| protein-(glutamine-N5) methyltransferase [Streptococcus anginosus F0211] Length = 276 Score = 265 bits (678), Expect = 5e-69, Method: Composition-based stats. Identities = 77/247 (31%), Positives = 123/247 (49%), Gaps = 8/247 (3%) Query: 16 GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75 LS Q ++ + L + L H I+G +F+ + PR Sbjct: 33 NLSFTQFVLKMQAEATADDIELLKKIQSQLLVHRPAQYIIGNAEFHGHSFKVDERVLIPR 92 Query: 76 PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135 PETE LV+ L+ + +++LD+GTG+GA+ L+L E ++ DIS AL+ Sbjct: 93 PETEELVNLILSEN-----PNTNIKVLDIGTGSGAIALSLATERSNWQVTASDISQDALD 147 Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195 +A+ NA + D +QSD F ++ G +D+IVSNPPYI + +GL V +P ++ Sbjct: 148 LAQENAEA--IDVAIDFVQSDCFQAITGKYDIIVSNPPYISETDREEVGLNVLASEPHLA 205 Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDYG 254 L DG + YR IA+ +HL + G +EIGY Q V +F+S + +D Sbjct: 206 LFAEEDGYAVYRKIAENAQKHLTEKGKIYLEIGYKQGEHVKELFQSAFPKMRIRVLQDQF 265 Query: 255 GNDRVLL 261 G DR+++ Sbjct: 266 GKDRMVV 272 >gi|40062726|gb|AAR37631.1| modification methylase, HemK family [uncultured marine bacterium 438] Length = 280 Score = 265 bits (678), Expect = 5e-69, Method: Composition-based stats. Identities = 88/263 (33%), Positives = 144/263 (54%), Gaps = 4/263 (1%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 DS L VI++P VL+ Q + I R K E I ++ ++F+ Sbjct: 21 NPQLDSEILLSNSIKRDKKHVILNPKEVLNSEQLGKFKSLIERRKKGEPIAYLINKKEFW 80 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 ++ D PRP++EL+++ L K D ++ILD+GTG+G + L++LKE Sbjct: 81 KDEFFVNKDVLIPRPDSELIIEQVLKI----YSKDDQLQILDIGTGSGCILLSILKERSN 136 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181 F G G+DIS K+++++K NA ++ R S + G +D+IVSNPPYIE + + Sbjct: 137 FYGTGIDISKKSIDVSKFNAKQLNLTNRVKFFHSSVDNFNNGKYDIIVSNPPYIEQLCLK 196 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 L +V +F+P+++L GG DG S R + + S + K+G +EIG+NQK V++I + Sbjct: 197 YLEKDVVNFEPKLALSGGFDGFSKIRKVINKTSNLIKKNGKFILEIGFNQKNKVIKILKE 256 Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264 ++ A KDYG NDR ++ + Sbjct: 257 EGFYVNKAIKDYGNNDRCIISTK 279 >gi|315924272|ref|ZP_07920496.1| protein-(glutamine-N5) methyltransferase [Pseudoramibacter alactolyticus ATCC 23263] gi|315622433|gb|EFV02390.1| protein-(glutamine-N5) methyltransferase [Pseudoramibacter alactolyticus ATCC 23263] Length = 283 Score = 265 bits (677), Expect = 5e-69, Method: Composition-based stats. Identities = 80/262 (30%), Positives = 131/262 (50%), Gaps = 10/262 (3%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 Q+ ++ L + ++ P+ L Q NAI R HE I G R+F Sbjct: 27 QSRFEAEVLLAAMMHQERLYFLMHPEIPLSSEQIRAFANAIKRRSAHEPSAMITGHREFM 86 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 + +++ PRP+TE +V++ALA+ I KR +LDL G+GA+ +AL P Sbjct: 87 GLDFDVNAHVLIPRPDTENIVETALAW----ISKRSRPEVLDLCCGSGAIGIALKNCCPN 142 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVI 179 + DIS +AL IAKSNA + + + + D F + FD+IV+NPPYI + Sbjct: 143 IQLWLSDISKEALAIAKSNAQKHHIEAQ--LILGDLFEGLLPGQRFDMIVTNPPYIPTDE 200 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 + L ++++++PR++LDGG DG Y+ + V HL + G +E G+NQ ++ + Sbjct: 201 IADLSPDIKNYEPRVALDGGEDGYDFYKRLFASVHDHLKEQGYLVLECGWNQADTLIDM- 259 Query: 240 ESRKLFLVNAFKDYGGNDRVLL 261 + + D G R L+ Sbjct: 260 -AHSFSHIERIYDLAGFARGLV 280 >gi|75762681|ref|ZP_00742520.1| Peptide release factor-glutamine N5-methyltransferase [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|228903803|ref|ZP_04067919.1| Protein hemK [Bacillus thuringiensis IBL 4222] gi|228942475|ref|ZP_04105012.1| Protein hemK [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228975407|ref|ZP_04135963.1| Protein hemK [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228982044|ref|ZP_04142337.1| Protein hemK [Bacillus thuringiensis Bt407] gi|74489827|gb|EAO53204.1| Peptide release factor-glutamine N5-methyltransferase [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|228777708|gb|EEM25982.1| Protein hemK [Bacillus thuringiensis Bt407] gi|228784389|gb|EEM32412.1| Protein hemK [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228817217|gb|EEM63305.1| Protein hemK [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228855830|gb|EEN00374.1| Protein hemK [Bacillus thuringiensis IBL 4222] gi|326943126|gb|AEA19022.1| modification methylase, HemK family [Bacillus thuringiensis serovar chinensis CT-43] Length = 283 Score = 265 bits (677), Expect = 5e-69, Method: Composition-based stats. Identities = 70/259 (27%), Positives = 119/259 (45%), Gaps = 7/259 (2%) Query: 8 HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67 LC V ++ ++++ +++ Q T I + ++ I ++G+ FY + Sbjct: 25 EIVLCHVLKMNRTGLLMNMREEINEEQEASFTEFIHKHVEGIPIQYMIGYEMFYGRSFFV 84 Query: 68 SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 + + PRPETE L+ L ++ + + D+GTG+GA+ + L E+ V Sbjct: 85 NEEVLIPRPETEELIVGVLERIERHFGDKE-LHVADIGTGSGAISITLALENKNLHVYTV 143 Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG---LFDVIVSNPPYIESVIVDCLG 184 DI+ +++E+AK NA G D S + DV+VSNPPYI L Sbjct: 144 DIAQESIEVAKENAKALGAE--VTFYHGDLLSPFDKTGQKLDVVVSNPPYIPEEDWRGLS 201 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-K 243 V++ +P+ +L GG DGL YR + + L + + + EIG Q DV R+ + Sbjct: 202 PVVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQEKAIVAFEIGVGQGEDVKRLLQQAFP 261 Query: 244 LFLVNAFKDYGGNDRVLLF 262 V D G DR++ Sbjct: 262 HAHVEVVFDINGKDRMVFA 280 >gi|22537234|ref|NP_688085.1| HemK family modification methylase [Streptococcus agalactiae 2603V/R] gi|25011159|ref|NP_735554.1| modification methylase, HemK family [Streptococcus agalactiae NEM316] gi|76798428|ref|ZP_00780668.1| HemK protein [Streptococcus agalactiae 18RS21] gi|77410474|ref|ZP_00786835.1| modification methylase, HemK family [Streptococcus agalactiae CJB111] gi|77413281|ref|ZP_00789477.1| modification methylase, HemK family [Streptococcus agalactiae 515] gi|22534101|gb|AAM99957.1|AE014241_8 modification methylase, HemK family [Streptococcus agalactiae 2603V/R] gi|23095558|emb|CAD46767.1| Unknown [Streptococcus agalactiae NEM316] gi|76586223|gb|EAO62741.1| HemK protein [Streptococcus agalactiae 18RS21] gi|77160668|gb|EAO71783.1| modification methylase, HemK family [Streptococcus agalactiae 515] gi|77163422|gb|EAO74372.1| modification methylase, HemK family [Streptococcus agalactiae CJB111] gi|319745080|gb|EFV97406.1| protein-(glutamine-N5) methyltransferase [Streptococcus agalactiae ATCC 13813] Length = 276 Score = 265 bits (677), Expect = 5e-69, Method: Composition-based stats. Identities = 81/253 (32%), Positives = 125/253 (49%), Gaps = 8/253 (3%) Query: 11 LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70 L + S+ +++ +S + D + + N + KH S I G F ++ + Sbjct: 28 LKDLKQWSTTDYLLNQNSSVSDTDQQLMENIFQQLKKHRSPQYITGKAYFRDLIFFVDER 87 Query: 71 TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130 PRPETE LVD L+ + K + +LD+GTG+GA+ ++L KE P + + DIS Sbjct: 88 VLIPRPETEELVDLILSEN-----KVEDCSVLDIGTGSGAIAISLKKERPSWDVLASDIS 142 Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDF 190 AL++AK NA N ++SD FS++ G FD+IVSNPPYI D +G V Sbjct: 143 VSALDLAKENA--NNCDAEVTFIESDVFSNISGKFDIIVSNPPYISYNDKDEVGKNVLAS 200 Query: 191 DPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNA 249 +P +L +GL+ YR I + +L G EIGY Q D+ + + Sbjct: 201 EPHSALFADEEGLAIYRKIIENSREYLQPRGKLYFEIGYKQGDDLRSLLKRYFPNNRCRV 260 Query: 250 FKDYGGNDRVLLF 262 KD G DR+++ Sbjct: 261 LKDIFGKDRMVVL 273 >gi|260549388|ref|ZP_05823607.1| protein-(glutamine-N5) methyltransferase [Acinetobacter sp. RUH2624] gi|260407497|gb|EEX00971.1| protein-(glutamine-N5) methyltransferase [Acinetobacter sp. RUH2624] Length = 271 Score = 265 bits (677), Expect = 6e-69, Method: Composition-based stats. Identities = 82/256 (32%), Positives = 119/256 (46%), Gaps = 10/256 (3%) Query: 9 SFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLS 68 L ++S ++ + L +Q + R E + + G + F+ + L ++ Sbjct: 23 WLLEHFLKINSLELKFRLEQELTAQQEQDYLAGLERIQNGEPLAYVTGSQPFWTLDLKVT 82 Query: 69 SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128 SDT PRP+TE+LV++ L +LP + I+DLGTGTGA+ LAL E P + D Sbjct: 83 SDTLVPRPDTEVLVETVLNLNLP-----NKANIVDLGTGTGAIALALASERPDWFVTATD 137 Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEV 187 I L IAK NA T+G+ WF ++E FD+IVSNPPYI+ + Sbjct: 138 IYAPTLNIAKENAQTHGLYH-VKFACGAWFEALEPQQFDLIVSNPPYIDPEDEHM---QA 193 Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLV 247 +PR +L GL+ I L G +E GY+Q V IF + Sbjct: 194 LATEPRRALVADHQGLADIEIIIAQGKNWLKPQGWIVLEHGYDQGQAVRGIFTEHGFSEI 253 Query: 248 NAFKDYGGNDRVLLFC 263 +DYG NDRV L Sbjct: 254 KTIQDYGQNDRVTLAR 269 >gi|91201017|emb|CAJ74074.1| similar to protein methyltransferase [Candidatus Kuenenia stuttgartiensis] Length = 323 Score = 265 bits (677), Expect = 6e-69, Method: Composition-based stats. Identities = 68/268 (25%), Positives = 118/268 (44%), Gaps = 7/268 (2%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 D+ L + Q PD + A+ R K + I +F + Sbjct: 48 PRLDAEVILSHLLNCDRIQFHTHPDKPVQRIIASRYKKAVQRRAKRVPLQYITNHAEFMS 107 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + PRPETELLV++ + + I + ++V I+D+G G+G + ++L K Sbjct: 108 SDFYVDERVLIPRPETELLVEAVIKKAKSFIHENEIV-IIDIGVGSGNIAISLAKNISTA 166 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-----EGLFDVIVSNPPYIES 177 + +DIS +AL++AK N + + E+ L + + + + IVSNPPYI S Sbjct: 167 GIMAIDISPEALDVAKMNTQKHHLQEKITFLCGNVYEPLQSCSIKTKAHFIVSNPPYIAS 226 Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237 + L EVRD++P +L G GL + I + L G +E+ Q V++ Sbjct: 227 TELSELQQEVRDYEPYTALISGNSGLEMFERILAEANSWLRPAGFLLLEVAEKQARQVIK 286 Query: 238 IFESRK-LFLVNAFKDYGGNDRVLLFCR 264 + ++ + KDY R+++ R Sbjct: 287 MIKNTNIFTSIQRIKDYQNISRIIIAQR 314 >gi|30023359|ref|NP_834990.1| modification methylase, HemK family [Bacillus cereus ATCC 14579] gi|228961592|ref|ZP_04123201.1| Protein hemK [Bacillus thuringiensis serovar pakistani str. T13001] gi|229112742|ref|ZP_04242275.1| Protein hemK [Bacillus cereus Rock1-15] gi|229130578|ref|ZP_04259534.1| Protein hemK [Bacillus cereus BDRD-Cer4] gi|229147869|ref|ZP_04276210.1| Protein hemK [Bacillus cereus BDRD-ST24] gi|296505753|ref|YP_003667453.1| modification methylase, HemK family [Bacillus thuringiensis BMB171] gi|29898920|gb|AAP12191.1| Methyltransferase [Bacillus cereus ATCC 14579] gi|228635519|gb|EEK92008.1| Protein hemK [Bacillus cereus BDRD-ST24] gi|228652917|gb|EEL08799.1| Protein hemK [Bacillus cereus BDRD-Cer4] gi|228670723|gb|EEL26034.1| Protein hemK [Bacillus cereus Rock1-15] gi|228798074|gb|EEM45078.1| Protein hemK [Bacillus thuringiensis serovar pakistani str. T13001] gi|296326805|gb|ADH09733.1| modification methylase, HemK family [Bacillus thuringiensis BMB171] Length = 283 Score = 265 bits (677), Expect = 6e-69, Method: Composition-based stats. Identities = 71/259 (27%), Positives = 116/259 (44%), Gaps = 7/259 (2%) Query: 8 HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67 LC V ++ ++++ + + Q T I + ++ I ++G+ FY + Sbjct: 25 EIVLCHVLKVNRTGLLMNMREEITEEQEKSFTEFIHKHVEGIPIQYMIGYEIFYGRSFFV 84 Query: 68 SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 + + PRPETE L+ L + + + D+GTG+GA+ + L E+ V Sbjct: 85 NEEVLIPRPETEELIVGVLERIERHF-GDEKLHVADIGTGSGAISITLALENKNLHVYTV 143 Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG---LFDVIVSNPPYIESVIVDCLG 184 DI+ +++E+AK NA G D S DV+VSNPPYI L Sbjct: 144 DIAQESIEVAKENAKALGAE--VTFYHGDLLSPFHKTGQKLDVVVSNPPYIPEEDWRGLS 201 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-K 243 V++ +P+ +L GG DGL YR + + L K + + EIG Q DV R+ + Sbjct: 202 PVVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEIGVGQGEDVKRLLQQAFP 261 Query: 244 LFLVNAFKDYGGNDRVLLF 262 V D G DR++ Sbjct: 262 HAHVEVVFDINGKDRMVFA 280 >gi|127513839|ref|YP_001095036.1| HemK family modification methylase [Shewanella loihica PV-4] gi|126639134|gb|ABO24777.1| modification methylase, HemK family [Shewanella loihica PV-4] Length = 280 Score = 265 bits (677), Expect = 6e-69, Method: Composition-based stats. Identities = 78/262 (29%), Positives = 124/262 (47%), Gaps = 8/262 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A D+ L + + PD L Q + R I I+G R+F++ Sbjct: 23 AKLDAEVMLLHIIHKQRSYLYTWPDERLTSEQVTEYKQMVGRRELGTPIAHIVGEREFWS 82 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + ++ T PRP+TE+LV++AL + + ++LDLGTGTGA+ L+L E + Sbjct: 83 LPFMVNPTTLIPRPDTEILVETAL-----NLPLAENAKVLDLGTGTGAIALSLAFERSNW 137 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181 + VD +A+ +AK+N + + + LQSDWF ++ F++IVSNPPYI+ Sbjct: 138 QITAVDKVLEAVALAKANRDNLKLP-QVEVLQSDWFDAINRYDFNLIVSNPPYIDEEDEH 196 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P +L G G + IA+ +L G +E G+ Q + V Sbjct: 197 LSQGDVR-FEPHSALTAGEHGYADLFYIAEAARDYLAPGGYLLLEHGFGQALTVRDKMIE 255 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 V +D+G NDR L Sbjct: 256 LGYEAVATVRDFGSNDRCTLGR 277 >gi|167464537|ref|ZP_02329626.1| modification methylase, HemK family protein [Paenibacillus larvae subsp. larvae BRL-230010] gi|322383118|ref|ZP_08056945.1| glutamine methylase of release factor 1-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321152780|gb|EFX45406.1| glutamine methylase of release factor 1-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 293 Score = 265 bits (677), Expect = 6e-69, Method: Composition-based stats. Identities = 79/259 (30%), Positives = 118/259 (45%), Gaps = 5/259 (1%) Query: 8 HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67 L + G +++ V + R E + ILG +DFY + + Sbjct: 32 ELLLQHLFGWERSTLLLRWGEVFPASYENQWEELVNRKAGGEPVQYILGEQDFYGLPFEV 91 Query: 68 SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 + PRPETELLV+ + + + + D+GTG+GA+ + L P ++ Sbjct: 92 NKAVLIPRPETELLVERIIYEGKRLFPQGSPL-LGDIGTGSGAIPVTLAHACPEWRVYSS 150 Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL---FDVIVSNPPYIESVIVDCLG 184 D+S ALE+A+ NAV NGV +R LQ D D++VSNPPYI + + L Sbjct: 151 DLSPLALEVARRNAVRNGVGDRVTLLQGDLLLPYVERGLPIDILVSNPPYIPTGDLPALQ 210 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK- 243 EVR F+P +L GG DGL YR + D + + L +E+G Q DV + Sbjct: 211 PEVRQFEPHTALFGGPDGLDLYRRMMDQLGSLPKQPALVGLEVGIGQADDVANLLRGAGD 270 Query: 244 LFLVNAFKDYGGNDRVLLF 262 V KD G DR ++ Sbjct: 271 WSSVEYVKDLAGIDRHVIA 289 >gi|315649891|ref|ZP_07902973.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Paenibacillus vortex V453] gi|315274690|gb|EFU38072.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Paenibacillus vortex V453] Length = 296 Score = 265 bits (677), Expect = 6e-69, Method: Composition-based stats. Identities = 83/268 (30%), Positives = 131/268 (48%), Gaps = 6/268 (2%) Query: 1 MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60 M+ R++ L V GLS + R L AI R + I+G ++F Sbjct: 31 MEPQRNAQLLLEHVLGLSGSSYYMALPEPFPAECRHALEEAIRRKAEGVPAQYIIGEQEF 90 Query: 61 YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALLKES 119 Y ++ PRPETELLV++ L + + + ++ +D+GTG+GA+ + L ++ Sbjct: 91 YGRPFEVTPAVLIPRPETELLVEAVLKYGQELAPRSEARLKAIDIGTGSGAIAVTLALQA 150 Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF-DVIVSNPPYIESV 178 P ++ + DIS +ALE+A NA + + Q + GL D++VSNPPYI + Sbjct: 151 PSWELLASDISPEALEVATRNAK--QLHANVEFRQGNLLEPFAGLAPDILVSNPPYIPAE 208 Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238 ++ L EVRD++PR +LDGG DGL+ YR + + L + E+G Q DV + Sbjct: 209 DIEGLQPEVRDYEPRTALDGGRDGLNPYRIMMAQLPLLSAPPRLIAFELGMGQAGDVAEL 268 Query: 239 FESRK-LFLVNAFKDYGGNDRVLL-FCR 264 + D G DR +L CR Sbjct: 269 LRQAGHWQEIVTVPDLAGIDRHVLGICR 296 >gi|324992932|gb|EGC24852.1| protein-(glutamine-N5) methyltransferase [Streptococcus sanguinis SK405] gi|325687438|gb|EGD29459.1| protein-(glutamine-N5) methyltransferase [Streptococcus sanguinis SK72] Length = 276 Score = 265 bits (677), Expect = 6e-69, Method: Composition-based stats. Identities = 85/262 (32%), Positives = 127/262 (48%), Gaps = 11/262 (4%) Query: 3 ALRDSHSF--LCRVTG-LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRD 59 A ++ S + R LS ++ + + R L + L H+ I+G D Sbjct: 17 AGEEAESLSFVYRALNKLSFTDFVLKLRTEVSQEDREQLKAIQEQLLAHKPAQYIIGSSD 76 Query: 60 FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119 F+ + L + PRPETE LV+ L+ + + ILD+GTG+GA+ L L Sbjct: 77 FHGLTLKVDERVLIPRPETEELVELILSENRE-----SSLSILDIGTGSGAIALTLANSR 131 Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179 P ++ D+S AL +A NA + G+S +QSD F ++ G FD+IVSNPPYI Sbjct: 132 PDWQITASDLSGDALSLATENAQSCGLS--LTFIQSDCFEAISGNFDIIVSNPPYISEAD 189 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 D +GL V +P ++L DG + YR IA+ HL K G +EIGY Q V + Sbjct: 190 KDEVGLNVLTSEPHMALFAEEDGYAVYRKIAEQAGDHLTKKGKIYLEIGYKQGDGVRELL 249 Query: 240 ESR-KLFLVNAFKDYGGNDRVL 260 + + KD G DR++ Sbjct: 250 KKSFPQKRIRVLKDRFGKDRMV 271 >gi|330502034|ref|YP_004378903.1| HemK family modification methylase [Pseudomonas mendocina NK-01] gi|328916320|gb|AEB57151.1| HemK family modification methylase [Pseudomonas mendocina NK-01] Length = 277 Score = 265 bits (677), Expect = 6e-69, Method: Composition-based stats. Identities = 81/249 (32%), Positives = 124/249 (49%), Gaps = 8/249 (3%) Query: 16 GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75 + P+ LD Q+ + R E + ILG + F+++ L ++ T PR Sbjct: 32 NKPRSYLRTWPERDLDSAQQAQFNAFMQRRRSGEPVAYILGHQGFWSLDLEVAPHTLIPR 91 Query: 76 PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135 P+TELLV++AL + + LDLGTGTGA+ LAL E P ++ GVD +A+ Sbjct: 92 PDTELLVETALD-----LLPATPLVALDLGTGTGAIALALASERPAWQVTGVDRIEEAVA 146 Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194 +A+ N + + S WFS++ G + +I+SNPPYI + +VR F+P Sbjct: 147 LAERNRQRLQLG-NARFVHSHWFSALPGQRYGLILSNPPYIRADDQHLEQGDVR-FEPSS 204 Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYG 254 +L G DGL R I HL G +E G++Q VDV R+ V + +D G Sbjct: 205 ALVAGNDGLDDIRAIIQAAPDHLLSGGWLLLEHGFDQAVDVRRLLADGGFVEVESRRDLG 264 Query: 255 GNDRVLLFC 263 G++R+ L Sbjct: 265 GHERISLGR 273 >gi|228911167|ref|ZP_04074973.1| Protein hemK [Bacillus thuringiensis IBL 200] gi|228848530|gb|EEM93378.1| Protein hemK [Bacillus thuringiensis IBL 200] Length = 283 Score = 265 bits (677), Expect = 6e-69, Method: Composition-based stats. Identities = 70/259 (27%), Positives = 120/259 (46%), Gaps = 7/259 (2%) Query: 8 HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67 LC V ++ ++++ +++ Q T I + ++ I ++G+ FY + Sbjct: 25 EIVLCHVLKMNRTGLLMNMREEINEEQEASFTEFIHKHVEGIPIQYMIGYEMFYGRSFFV 84 Query: 68 SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 + + PRPETE L+ L ++ + + D+GTG+GA+ + L E+ V Sbjct: 85 NEEVLIPRPETEELIVGVLERIERHFGDKE-LHVADIGTGSGAISITLALENKNLHVYTV 143 Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG---LFDVIVSNPPYIESVIVDCLG 184 DI+ +++E+AK NA + G D S + DV+VSNPPYI L Sbjct: 144 DIAQESIEVAKENAKSLGAE--VTFYHGDLLSPFDKTGQKLDVVVSNPPYIPEEDWRGLS 201 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-K 243 V++ +P+ +L GG DGL YR + + L + + + EIG Q DV R+ + Sbjct: 202 PVVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQEKAIVAFEIGVGQGEDVKRLLQQAFP 261 Query: 244 LFLVNAFKDYGGNDRVLLF 262 V D G DR++ Sbjct: 262 HAHVEVVFDINGKDRMVFA 280 >gi|229087818|ref|ZP_04219934.1| Protein hemK [Bacillus cereus Rock3-44] gi|228695493|gb|EEL48362.1| Protein hemK [Bacillus cereus Rock3-44] Length = 283 Score = 265 bits (677), Expect = 6e-69, Method: Composition-based stats. Identities = 68/259 (26%), Positives = 117/259 (45%), Gaps = 7/259 (2%) Query: 8 HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67 LC V + ++++ + + Q T I + + + ++G+ FY + Sbjct: 25 EIVLCHVLKTNRTGLMMNMREEISEEQEKTFTEFIHKHVDGIPVQYMMGYEMFYGRSFFV 84 Query: 68 SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 + + PRPETE L+ L + R+ + + + D+GTG+GA+ + L E+ V Sbjct: 85 NEEVLIPRPETEELIVGVLDR-VQRMFGKQELHVADIGTGSGAISITLALENQNLHVYTV 143 Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVIVDCLG 184 DI+ +++E+A+ NA N + D S DV+VSNPPYI L Sbjct: 144 DIAKESIEVAQENA--NALGANVTFYHGDLLSPFYETGQKLDVVVSNPPYIPEEDWRGLS 201 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-K 243 V++ +P+ +L GG DGL YR + + L K + + E+G Q DV + + Sbjct: 202 PVVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEVGIGQGEDVKGLLQKTFP 261 Query: 244 LFLVNAFKDYGGNDRVLLF 262 V D G DR++ Sbjct: 262 YAHVEVVFDINGKDRMVFA 280 >gi|78065072|ref|YP_367841.1| modification methylase HemK [Burkholderia sp. 383] gi|77965817|gb|ABB07197.1| [protein release factor]-glutamine N5-methyltransferase [Burkholderia sp. 383] Length = 280 Score = 265 bits (677), Expect = 6e-69, Method: Composition-based stats. Identities = 83/261 (31%), Positives = 125/261 (47%), Gaps = 11/261 (4%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L G + Q+I D+ LD R L E + +++G R+F+ Sbjct: 19 DARVLLAHALGWTRTQLITRGDATLDAAAVERYRALEARRLAGEPVAQLVGMREFFGRPF 78 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 ++ D PRPETELLV++AL I+ +LDLGTG+GA+ +++ E P + Sbjct: 79 DVTPDVLIPRPETELLVEAALD----AIDGLPHPAVLDLGTGSGAIAVSIAAERPDARVW 134 Query: 126 GVDISCKALEIAKSNAVTNGVSER----FDTLQSDWFSSVEG--LFDVIVSNPPYIESVI 179 +D S AL +A+ NA + R L+SDW+++++ FD IVSNPPYI Sbjct: 135 ALDRSPAALAVAQRNAGKLLDARRPGGPLHWLESDWYAALDPALAFDTIVSNPPYIAQHD 194 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 ++R F+PR +L DGLS RTI G +L G +E GY+Q V + Sbjct: 195 PHLAQGDLR-FEPRGALTDDADGLSAIRTIVAGAGTYLKPGGTLWIEHGYDQAEAVRAVL 253 Query: 240 ESRKLFLVNAFKDYGGNDRVL 260 S V + D +R Sbjct: 254 ASHGFVAVESLADLAAIERTT 274 >gi|229050999|ref|ZP_04194548.1| Protein hemK [Bacillus cereus AH676] gi|228722376|gb|EEL73772.1| Protein hemK [Bacillus cereus AH676] Length = 283 Score = 265 bits (677), Expect = 6e-69, Method: Composition-based stats. Identities = 71/259 (27%), Positives = 115/259 (44%), Gaps = 7/259 (2%) Query: 8 HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67 LC V ++ ++++ + + Q T I + ++ I ++G+ FY + Sbjct: 25 EIVLCHVLKVNRTGLLMNMREEITEEQEKSFTEFIHKHVEGIPIQYMIGYEMFYGRSFFV 84 Query: 68 SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 + + PRPETE L+ L + + + D+GTG+GA+ + L E+ V Sbjct: 85 NEEVLIPRPETEELIVGVLERIERHF-GDEKLHVADIGTGSGAISITLALENKNLHVYTV 143 Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG---LFDVIVSNPPYIESVIVDCLG 184 DI+ +++E+AK NA G D S DV+VSNPPYI L Sbjct: 144 DIAQESIEVAKENAKALGAE--VTFYHGDLLSPFHKTGQKLDVVVSNPPYIPEEDWRGLS 201 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-K 243 V++ +P+ +L GG DGL YR + + L K + + EIG Q DV R + Sbjct: 202 PVVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEIGVGQGEDVKRFLQQAFP 261 Query: 244 LFLVNAFKDYGGNDRVLLF 262 V D G DR++ Sbjct: 262 HAHVEVVFDINGKDRMVFA 280 >gi|261365336|ref|ZP_05978219.1| protein-(glutamine-N5) methyltransferase [Neisseria mucosa ATCC 25996] gi|288566276|gb|EFC87836.1| protein-(glutamine-N5) methyltransferase [Neisseria mucosa ATCC 25996] Length = 287 Score = 265 bits (677), Expect = 6e-69, Method: Composition-based stats. Identities = 82/265 (30%), Positives = 119/265 (44%), Gaps = 15/265 (5%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 ++ L + G S Q+I + L + R L E I I+G R+FY Sbjct: 28 EARMLLQKAGGYSRVQLITQGVEAIPADIFARLDSLAERRLNGEPIAYIIGGREFYGRWF 87 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 + D PRPETE LV++ + R+ DLGTG+GAV + + E + Sbjct: 88 EVCPDVLIPRPETEHLVEAVIEHL------PKNGRVWDLGTGSGAVAVTVALERKDAEVR 141 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWF------SSVEGLFDVIVSNPPYIESVI 179 DIS +AL +A+ NA G + + WF S + FDVIVSNPPYIE+ Sbjct: 142 ASDISRQALVVARRNAENLGAA--VEFASGSWFDTDKTSSEDKYRFDVIVSNPPYIEADD 199 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 ++R F+P+ +L DGL+ R +A L + G +E GYNQ V +I Sbjct: 200 SHLNQGDLR-FEPQTALTDFADGLTCIRELAQRAPEFLKEGGWLLLEHGYNQGGAVRQIL 258 Query: 240 ESRKLFLVNAFKDYGGNDRVLLFCR 264 + +D G DR+ L R Sbjct: 259 SENGFTEIETRQDLAGLDRLTLGVR 283 >gi|186477470|ref|YP_001858940.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Burkholderia phymatum STM815] gi|184193929|gb|ACC71894.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Burkholderia phymatum STM815] Length = 283 Score = 265 bits (677), Expect = 7e-69, Method: Composition-based stats. Identities = 82/263 (31%), Positives = 128/263 (48%), Gaps = 10/263 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 ++ L G ++I D LD Q N R E + +++G R+F+ Sbjct: 18 PALEARILLGHALGWRRTELITRADHPLDSAQVAAFRNLETRRAAGEPVAQLIGSREFFG 77 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + ++ D PRPETELLV++A+ E R+LDLGTGTGA+ +++ P Sbjct: 78 LDFDVTRDVLIPRPETELLVETAVQAL---EEHGARSRVLDLGTGTGAIAVSIAWSRPDA 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSER----FDTLQSDWFSSVEGL--FDVIVSNPPYIE 176 + VD S +AL +A+ NAV +R SDW+S+++ F+VIVSNPPYI Sbjct: 135 RVWAVDRSEEALSVARRNAVRLLEPKRPGGDLRFALSDWYSALDASLVFEVIVSNPPYIA 194 Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236 S ++R F+PR +L DGLS R I L +G+ +E GY+Q V Sbjct: 195 SGDPHLSQGDLR-FEPRGALTDEADGLSAIRAIVASAPARLVPNGVLWMEHGYDQAQAVR 253 Query: 237 RIFESRKLFLVNAFKDYGGNDRV 259 + ++ + + D G +R+ Sbjct: 254 AMLAAQGFADIRSECDLAGIERI 276 >gi|218900454|ref|YP_002448865.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacillus cereus G9842] gi|218544940|gb|ACK97334.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacillus cereus G9842] Length = 283 Score = 265 bits (677), Expect = 7e-69, Method: Composition-based stats. Identities = 70/259 (27%), Positives = 118/259 (45%), Gaps = 7/259 (2%) Query: 8 HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67 LC V ++ ++++ +++ Q T I + ++ I ++G+ FY + Sbjct: 25 EIVLCHVLKMNRTGLLMNMREEINEEQEASFTEFIHKHVEGIPIQYMIGYEMFYGRSFFV 84 Query: 68 SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 + + PRPETE L+ L ++ + + D+GTG+GA+ + L E+ V Sbjct: 85 NEEVLIPRPETEELIVGVLERIERHFGDKE-LHVADIGTGSGAISITLALENKNLHVYTV 143 Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG---LFDVIVSNPPYIESVIVDCLG 184 DI+ +++E+AK NA G D S DV+VSNPPYI L Sbjct: 144 DIAQESIEVAKENAKALGAE--VTFYHGDLLSPFHKTGQKLDVVVSNPPYIPEEDWRGLS 201 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-K 243 V++ +P+ +L GG DGL YR + + L + + + EIG Q DV R+ + Sbjct: 202 PVVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQEKAIVAFEIGVGQGEDVKRLLQQAFP 261 Query: 244 LFLVNAFKDYGGNDRVLLF 262 V D G DR++ Sbjct: 262 HAHVEVVFDINGKDRMVFA 280 >gi|75674574|ref|YP_316995.1| modification methylase HemK [Nitrobacter winogradskyi Nb-255] gi|74419444|gb|ABA03643.1| [protein release factor]-glutamine N5-methyltransferase [Nitrobacter winogradskyi Nb-255] Length = 298 Score = 264 bits (676), Expect = 7e-69, Method: Composition-based stats. Identities = 101/261 (38%), Positives = 141/261 (54%), Gaps = 1/261 (0%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A D+ V L +I LD+ L R L E I RILG ++F+ Sbjct: 29 AALDARMLTGAVLDLDLTGLIAQGLRQLDEDDAARLDAFARRRLAGEPIARILGTKEFWG 88 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L LS+DT PR +TE +V++AL ++ +RI DLGTG+GA+ LALL E P Sbjct: 89 LPLKLSADTLVPRADTETVVEAALGVLRAEGRTQEPLRIADLGTGSGAILLALLTELPKA 148 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182 GVG D+S AL+ A++NA G++ R L SD+ + G FD+IVSNPPYI S + Sbjct: 149 TGVGTDLSAAALDTARANAQGVGLAARSRFLVSDYADGLSGQFDLIVSNPPYIRSADIPT 208 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 L EVRD DP ++LDGG+DGL YR IA + L GL +EIG Q V + + Sbjct: 209 LAPEVRDHDPHLALDGGLDGLDAYRRIAPRAAALLADGGLLVLEIGQGQGGAVTPLVSAA 268 Query: 243 KLFLVNAFK-DYGGNDRVLLF 262 L ++ + + D G R ++ Sbjct: 269 GLTVMGSVRADLAGIGRAVVA 289 >gi|148258773|ref|YP_001243358.1| putative methyltransferase hemK [Bradyrhizobium sp. BTAi1] gi|146410946|gb|ABQ39452.1| Putative protein methyltransferase hemK modifies release factors RF-1 and RF-2 [Bradyrhizobium sp. BTAi1] Length = 295 Score = 264 bits (676), Expect = 7e-69, Method: Composition-based stats. Identities = 92/260 (35%), Positives = 136/260 (52%), Gaps = 2/260 (0%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 D+ + L +++ L +L + R L E + RILG ++F+ Sbjct: 29 PELDARLLVGHALQLDLTGLVMHGQRALSAADITWLEALMQRRLAGEPVARILGTKEFWG 88 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L LS+DT PRP+TE +V+ AL + + +RI DLGTG+GA+ LALL E P Sbjct: 89 LELHLSADTLVPRPDTETVVELALEHLAAGGDLKRPLRIADLGTGSGAILLALLSELPAA 148 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182 GVG DIS AL+ A+ NA G+ +R + + S++ FD+IVSNPPYI S +D Sbjct: 149 YGVGTDISHAALQTARDNARILGLGDRAGFIAGSYASALSPPFDLIVSNPPYIPSREIDD 208 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 L ++VR +DP +LDGG DGL YR + ++ L G VE+G Q DV + + Sbjct: 209 LAIDVRAYDPLRALDGGADGLDAYRALIPQAAQLLQPGGTLVVEVGQGQSEDVAELMRAA 268 Query: 243 KLFL--VNAFKDYGGNDRVL 260 +L + D G R + Sbjct: 269 RLAIDSSAIKADLAGIPRAV 288 >gi|182420255|ref|ZP_02951484.1| methyltransferase, HemK family [Clostridium butyricum 5521] gi|237666626|ref|ZP_04526611.1| modification methylase, HemK family [Clostridium butyricum E4 str. BoNT E BL5262] gi|182375850|gb|EDT73442.1| methyltransferase, HemK family [Clostridium butyricum 5521] gi|237657825|gb|EEP55380.1| modification methylase, HemK family [Clostridium butyricum E4 str. BoNT E BL5262] Length = 585 Score = 264 bits (676), Expect = 7e-69, Method: Composition-based stats. Identities = 75/263 (28%), Positives = 117/263 (44%), Gaps = 7/263 (2%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A D+ L V +I + + Q I + K + IL +F Sbjct: 325 ARLDTELLLGNVIEKERLYLITHKEETIGKDQCDEFFELIEKRRKKMPVKYILNKCEFMG 384 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L + PR +TELLVD L I + D +I DL G+GA+ ++L Sbjct: 385 IDLHVEEGVLIPRDDTELLVDEVLK----NISEDDEKQICDLCCGSGAIGISLACLRKNI 440 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS---SVEGLFDVIVSNPPYIESVI 179 K +D ++ N + + ER +SD +D+IVSNPPYIE Sbjct: 441 KVDLLDYYPIPEKVTLINIEKHNLQERVSFSKSDLLDVSIKASKKYDIIVSNPPYIEEEE 500 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 ++ L +V+ ++P +L GGIDGL Y+ I + LN++G+ + EIGYNQ V + Sbjct: 501 IEKLMDDVQKYEPHTALSGGIDGLDFYKKIVNQSIEVLNENGILAFEIGYNQGKAVKSLM 560 Query: 240 ESRKLFLVNAFKDYGGNDRVLLF 262 E V KD+ DR+++ Sbjct: 561 EENNFKDVRVIKDFASLDRIVIG 583 >gi|99080783|ref|YP_612937.1| HemK family modification methylase [Ruegeria sp. TM1040] gi|99037063|gb|ABF63675.1| modification methylase HemK family [Ruegeria sp. TM1040] Length = 278 Score = 264 bits (676), Expect = 7e-69, Method: Composition-based stats. Identities = 98/262 (37%), Positives = 135/262 (51%), Gaps = 8/262 (3%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 RD+ L + + +V + L I + ++G RDFY Sbjct: 23 DPARDARVLLAHAARIEAARVTLIAPEELSHEVAERYDQLISLRAIRVPVSHLVGERDFY 82 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 R +S D +PRPETE L+++ALA R+LDLG G+G + + LL E Sbjct: 83 GRRFKVSGDVLDPRPETETLIEAALA--------EPFERVLDLGVGSGCILVTLLAEQQR 134 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181 +G+GVD+S A A +NAV + V R D QS+WFS+VEG FD+IVSNPPYI +D Sbjct: 135 ARGLGVDLSEAACLQASANAVLHRVEARADIRQSNWFSAVEGQFDLIVSNPPYIALEEMD 194 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 L EVRD +P+++L G DGLS YR I G++ HL +G VEIG Q V ++ Sbjct: 195 GLSAEVRDHEPQMALTDGADGLSAYRQICAGLAPHLAANGRVMVEIGPTQGPAVAQMMRE 254 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 L V+ D G DRV+ Sbjct: 255 TGLRDVSVLPDLDGRDRVVFGR 276 >gi|294650078|ref|ZP_06727462.1| protein-glutamine N-methyltransferase [Acinetobacter haemolyticus ATCC 19194] gi|292824029|gb|EFF82848.1| protein-glutamine N-methyltransferase [Acinetobacter haemolyticus ATCC 19194] Length = 273 Score = 264 bits (676), Expect = 8e-69, Method: Composition-based stats. Identities = 82/263 (31%), Positives = 130/263 (49%), Gaps = 11/263 (4%) Query: 4 LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63 +++ L + G++S ++ + + L + Q + + R + E + + G + F+ + Sbjct: 18 RQEAAWLLEHILGVNSLELKLRLEQELTEIQEQAYLDGLARIEQGEPLAYVTGSQPFWTL 77 Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 L ++ DT PRP+TE+LV++ L SL I+DLGTGTGA+ LAL E P + Sbjct: 78 DLKVTHDTLVPRPDTEILVETVLKLSLD-----PQANIVDLGTGTGAIALALASERPQWS 132 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVD 181 DI L++A+ NA+ +G+S WF ++ + FD+IVSNPPYI+ V Sbjct: 133 VTATDIYQPTLDVAQDNALKHGLSL-VKFACGAWFEALVEQQQFDLIVSNPPYIDPDDVH 191 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +P +L GL+ I L G ++E GY+Q+ V IFE Sbjct: 192 MQK---LKSEPERALIAANHGLADIEIIIAQGKAWLKAKGWIALEHGYDQRQAVREIFEL 248 Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264 + KDYGGNDRV L + Sbjct: 249 HGFEQIQTIKDYGGNDRVSLAQK 271 >gi|71083225|ref|YP_265944.1| hypothetical protein SAR11_0519 [Candidatus Pelagibacter ubique HTCC1062] gi|71062338|gb|AAZ21341.1| HemK [Candidatus Pelagibacter ubique HTCC1062] Length = 280 Score = 264 bits (676), Expect = 8e-69, Method: Composition-based stats. Identities = 84/263 (31%), Positives = 143/263 (54%), Gaps = 4/263 (1%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 DS L +I++P VL+ Q + I R K E I ++ ++F+ Sbjct: 21 NPQLDSEILLSNSIKRDKKYIILNPKEVLNSEQLRKFKSLIERRKKGEPIAYLINKKEFW 80 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 ++ D PRP++EL+++ L K D +++LD+GTG+G + L++LKE Sbjct: 81 KDEFFVNKDVLIPRPDSELIIEQVLKI----YSKDDHLQLLDIGTGSGCILLSILKERSN 136 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181 F G G+DIS K++ ++K NA ++ R S + G +D++VSNPPYIE + + Sbjct: 137 FYGTGIDISKKSINVSKFNAKQLNLTNRVKFFHSSVDNFNNGKYDIVVSNPPYIEQLSLK 196 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 L +V +F+P+++L GG DG S R + + + + K+G +EIG+NQK V++I + Sbjct: 197 YLEKDVVNFEPKLALSGGFDGFSKIRKVINKTNNLIKKNGKFILEIGFNQKNKVIKILKE 256 Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264 ++ A KDYG NDR ++ + Sbjct: 257 EGFYVNKAIKDYGNNDRCVISTK 279 >gi|296113366|ref|YP_003627304.1| protein methyltransferase HemK [Moraxella catarrhalis RH4] gi|295921060|gb|ADG61411.1| protein methyltransferase HemK [Moraxella catarrhalis RH4] gi|326559851|gb|EGE10251.1| protein methyltransferase HemK [Moraxella catarrhalis 7169] gi|326560801|gb|EGE11168.1| protein methyltransferase HemK [Moraxella catarrhalis 103P14B1] gi|326563538|gb|EGE13797.1| protein methyltransferase HemK [Moraxella catarrhalis 12P80B1] gi|326569661|gb|EGE19713.1| protein methyltransferase HemK [Moraxella catarrhalis BC1] gi|326570144|gb|EGE20189.1| protein methyltransferase HemK [Moraxella catarrhalis BC8] gi|326570883|gb|EGE20907.1| protein methyltransferase HemK [Moraxella catarrhalis BC7] gi|326574432|gb|EGE24374.1| protein methyltransferase HemK [Moraxella catarrhalis 101P30B1] gi|326575975|gb|EGE25898.1| protein methyltransferase HemK [Moraxella catarrhalis CO72] Length = 295 Score = 264 bits (676), Expect = 8e-69, Method: Composition-based stats. Identities = 80/259 (30%), Positives = 131/259 (50%), Gaps = 10/259 (3%) Query: 10 FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69 +L V ++ D D + +T I++ + + + G + F+ +++ Sbjct: 37 WLMHVLDKPFIFLMTDEDYQPTLEESSKITAGIMQLSAGKPLAYLTGQQSFWGRHFLVNA 96 Query: 70 DTFEPRPETELLVDSALAFSLPR-----IEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 T PR +TE+LV++ L ++ + + +++V ILDLGTGTG + + L E F + Sbjct: 97 HTLIPRADTEILVETILNYAKAQQKIRQTDNKNLVNILDLGTGTGCIGITLALELEFAQV 156 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184 V VDIS +AL++A+ N + ++ R LQS W V G FD+IVSNPPYI+ + Sbjct: 157 VLVDISSEALKVAEQN--NHRLNARCQLLQSHWLQKVSGQFDIIVSNPPYIKENDEHLVN 214 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 +P +L DGL+ R I + +L GL ++E G++Q V ++ S Sbjct: 215 ---LKHEPITALVAAEDGLTDIRHIIETGRAYLKDGGLMAIEHGFDQAEAVRNLYLSSGY 271 Query: 245 FLVNAFKDYGGNDRVLLFC 263 V +DYGGNDRV L Sbjct: 272 LDVYTIQDYGGNDRVTLGR 290 >gi|322517016|ref|ZP_08069905.1| protein-(glutamine-N5) methyltransferase [Streptococcus vestibularis ATCC 49124] gi|322124433|gb|EFX95930.1| protein-(glutamine-N5) methyltransferase [Streptococcus vestibularis ATCC 49124] Length = 277 Score = 264 bits (676), Expect = 8e-69, Method: Composition-based stats. Identities = 81/247 (32%), Positives = 126/247 (51%), Gaps = 8/247 (3%) Query: 17 LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRP 76 ++ + + L + + H+ ILG+ DF+ +R + PRP Sbjct: 34 WDLTHFVLQLRQEVSEEDAELLAHVFSQLKNHKPAQYILGYEDFHGLRFQVDERVLIPRP 93 Query: 77 ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136 ET+ LVD LA + ++ILD+GTG+GA+ ++L K PF++ D+S AL + Sbjct: 94 ETKELVDLILAEN-----PSSELKILDIGTGSGAISVSLKKSCPFWQVTASDLSADALVL 148 Query: 137 AKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL 196 AK NA N V +QSD F ++ G FD+IVSNPPYI D +GL V +P+++L Sbjct: 149 AKENAKLNQVD--ISFVQSDVFENISGSFDIIVSNPPYISENDKDEVGLNVLTSEPKMAL 206 Query: 197 DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDYGG 255 +GL+ YR I + +++L G EIGY Q +D+ R+ V KD G Sbjct: 207 FADEEGLAIYRQIIEDATKYLTPKGKLYFEIGYKQGLDLKRLLSLHFPDKHVRVLKDQFG 266 Query: 256 NDRVLLF 262 DR+++ Sbjct: 267 QDRMVVM 273 >gi|163739712|ref|ZP_02147120.1| modification methylase, HemK family protein [Phaeobacter gallaeciensis BS107] gi|161386942|gb|EDQ11303.1| modification methylase, HemK family protein [Phaeobacter gallaeciensis BS107] Length = 285 Score = 264 bits (676), Expect = 8e-69, Method: Composition-based stats. Identities = 94/259 (36%), Positives = 129/259 (49%), Gaps = 8/259 (3%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 RD+ L + + +V + L I + ++G R+FY Sbjct: 25 DPARDARVLLAHAARIEASRVTLIAPEDLAPEIAERYEQLIALRAIRVPVSHLIGEREFY 84 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 R +S D +PRPETE L+++ALA R+LDLG G+G + + LL E Sbjct: 85 GRRFKVSGDVLDPRPETECLIEAALA--------EPFSRVLDLGLGSGCILVTLLAEQAD 136 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181 GVGVD+S A A +NAV + V R + LQSDWFS+V+G FD+IVSNPPYI + Sbjct: 137 ATGVGVDLSEAACLQASANAVLHRVEPRAEVLQSDWFSAVDGQFDLIVSNPPYIALDEMS 196 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 L EVR +P ++L G DGL YR IA + +L G +EIG Q V + S Sbjct: 197 GLSDEVRGHEPEMALTDGGDGLGAYRVIAAELGGYLAPQGRVFLEIGPTQGAAVSDLLLS 256 Query: 242 RKLFLVNAFKDYGGNDRVL 260 L V +D G DRV+ Sbjct: 257 AGLKEVRVIQDLDGRDRVV 275 >gi|83951818|ref|ZP_00960550.1| modification methylase, HemK family protein [Roseovarius nubinhibens ISM] gi|83836824|gb|EAP76121.1| modification methylase, HemK family protein [Roseovarius nubinhibens ISM] Length = 275 Score = 264 bits (676), Expect = 8e-69, Method: Composition-based stats. Identities = 95/262 (36%), Positives = 130/262 (49%), Gaps = 9/262 (3%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 + R++ + GL ++ + L + R E + ILG R FY Sbjct: 21 EGAREARLLMAAALGLDPSRMTLHLHDDLGPEGAARFEALLARRAAREPMSHILGQRQFY 80 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 ++ D +PRPETE LV +AL R+LDLGTG+G + L+LL E Sbjct: 81 GRAFKVTGDVLDPRPETECLVAAALEEGFE--------RVLDLGTGSGCILLSLLAEREG 132 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181 +G+G D+S AL++A+ NA G++ R ++DWF V G +D+IVSNPPYI + Sbjct: 133 AQGLGADVSAAALDVARENAARLGLASRAAFQEADWFKGVAGQYDLIVSNPPYIGIAEMP 192 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 L E +PR +L DGLS YR IA GV HL G VEIG Q DV RIF Sbjct: 193 ELAPE-LAHEPRAALTDEGDGLSAYRAIAAGVLAHLVPGGRILVEIGRTQGADVARIFAE 251 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 L V +D G DRV++ Sbjct: 252 AGLQAVELRQDLDGRDRVVMAR 273 >gi|320160373|ref|YP_004173597.1| putative modification methylase HemK [Anaerolinea thermophila UNI-1] gi|319994226|dbj|BAJ62997.1| putative modification methylase HemK [Anaerolinea thermophila UNI-1] Length = 287 Score = 264 bits (675), Expect = 9e-69, Method: Composition-based stats. Identities = 73/262 (27%), Positives = 125/262 (47%), Gaps = 6/262 (2%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A + V + P+++L D Q L + R L+ + + G ++F+ Sbjct: 25 AGIEVQVLAAHVLKRPRAWIAAHPETLLSDEQASHLNTLLGRLLEGVPLPYLTGKQEFFG 84 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + +S PRPETE LV++AL + L R +R+ R+ D+GTG+G + +++ P Sbjct: 85 LEFEVSPAVLIPRPETETLVEAALQW-LKRFPERN--RVADVGTGSGCIAVSIAYHMPNV 141 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182 + + D S +AL++A+ N +GVS+R +Q D S+ G+FD++ +N PYI + +D Sbjct: 142 RVLATDFSHEALKVAQRNVNRHGVSDRVQLIQCDLLSACAGMFDLVCANLPYIPTSALDE 201 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES- 241 F+P +LDGG G + + R L G +EI ++Q V I Sbjct: 202 TPP--ARFEPIAALDGGESGWEKIKALLQDAPRWLVPGGCILLEIQWDQGQTVSEIARGI 259 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 + +D DRV+L Sbjct: 260 FPAAEIQILQDLAHLDRVVLIQ 281 >gi|91762345|ref|ZP_01264310.1| HemK [Candidatus Pelagibacter ubique HTCC1002] gi|91718147|gb|EAS84797.1| HemK [Candidatus Pelagibacter ubique HTCC1002] Length = 280 Score = 264 bits (675), Expect = 9e-69, Method: Composition-based stats. Identities = 85/263 (32%), Positives = 143/263 (54%), Gaps = 4/263 (1%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 DS L +I++P VL+ Q + I R K E I ++ ++F+ Sbjct: 21 NPQLDSEILLSNSIKRDKKHIILNPKEVLNSEQLRKFKSLIERRKKGEPIAYLINKKEFW 80 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 ++ D PRP++EL+++ L K D +++LD+GTG+G + L++LKE Sbjct: 81 KDEFFVNKDVLIPRPDSELIIEQVLKI----YSKDDHLQLLDIGTGSGCILLSILKERSN 136 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181 F G G+DIS K++ ++K NA ++ R S + G +D++VSNPPYIE + + Sbjct: 137 FYGTGIDISKKSINVSKFNAKQLNLTNRVKFFHSSVDNFNNGKYDIVVSNPPYIEQLSLK 196 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 L +V +F+P+++L GG DG S R + + S + K+G +EIG+NQK V++I + Sbjct: 197 YLEKDVVNFEPKLALSGGFDGFSKIRKVINKASILIKKNGKFILEIGFNQKNKVIKILKE 256 Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264 ++ A KDYG NDR ++ + Sbjct: 257 EGFYVNKAIKDYGNNDRCIISTK 279 >gi|221213332|ref|ZP_03586307.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Burkholderia multivorans CGD1] gi|221166784|gb|EED99255.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Burkholderia multivorans CGD1] Length = 280 Score = 264 bits (675), Expect = 1e-68, Method: Composition-based stats. Identities = 84/261 (32%), Positives = 123/261 (47%), Gaps = 11/261 (4%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L G + Q+I D LD R E + +++G R+F+ Sbjct: 19 DARVLLAHALGWTRTQLITRGDRPLDAEAVERYRVLEARRAAGEPVAQLVGMREFFGRPF 78 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 ++ D PRPETELLV++AL I+ +LDLGTG+GA+ +++ E P + Sbjct: 79 DVTPDVLIPRPETELLVEAALD----AIDGLAHPAVLDLGTGSGAIAVSIAAERPDARVW 134 Query: 126 GVDISCKALEIAKSNAVTNGVSER----FDTLQSDWFSSVEG--LFDVIVSNPPYIESVI 179 +D S AL +A+ NA + R LQSDW+++++ FD IVSNPPYI Sbjct: 135 ALDRSAAALAVAQRNADKLLDARRPGGPLQWLQSDWYAALDPALAFDAIVSNPPYIARHD 194 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 ++R F+PR +L DGLS RTI G HL G +E GY+Q V + Sbjct: 195 PHLSQGDLR-FEPRGALTDDADGLSAIRTIVAGARAHLKPGGTLWIEHGYDQAEAVRALL 253 Query: 240 ESRKLFLVNAFKDYGGNDRVL 260 S V + D +R Sbjct: 254 ASHGFDAVESLADLAAIERTT 274 >gi|239501458|ref|ZP_04660768.1| methyl transferase [Acinetobacter baumannii AB900] Length = 273 Score = 264 bits (675), Expect = 1e-68, Method: Composition-based stats. Identities = 79/255 (30%), Positives = 121/255 (47%), Gaps = 10/255 (3%) Query: 9 SFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLS 68 L ++S ++ + L +Q ++ R E + + G + F+ + L ++ Sbjct: 23 WLLEHFLKINSLELKFRLEQELTAQQEQDYLASLERIQNGEPLAYVTGSQPFWTLDLKVT 82 Query: 69 SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128 SDT PRP+TE+LV++ L +LP+ I+DLGTGTGA+ LAL E P + D Sbjct: 83 SDTLVPRPDTEVLVETVLNLNLPK-----NANIVDLGTGTGAIALALASERPDWFVTATD 137 Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEV 187 I L++AK NA T+G+ WF ++E FD+IVSNPPYI+ + Sbjct: 138 IYAPTLDVAKENAQTHGL-HHVKFACGAWFEALEPQQFDLIVSNPPYIDPEDEHM---QA 193 Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLV 247 +PR +L GL+ I L G ++E GY+Q V +F + Sbjct: 194 LATEPRRALVADHHGLADIEIIIAQGKNWLKPQGWIALEHGYDQGQAVRNVFAEHGFSEI 253 Query: 248 NAFKDYGGNDRVLLF 262 +DYG NDRV Sbjct: 254 RTIQDYGRNDRVTFA 268 >gi|169795524|ref|YP_001713317.1| methyl transferase [Acinetobacter baumannii AYE] gi|213158535|ref|YP_002319833.1| protein methylase, HemK family [Acinetobacter baumannii AB0057] gi|215483011|ref|YP_002325216.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Acinetobacter baumannii AB307-0294] gi|301344981|ref|ZP_07225722.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Acinetobacter baumannii AB056] gi|301513509|ref|ZP_07238746.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Acinetobacter baumannii AB058] gi|301597422|ref|ZP_07242430.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Acinetobacter baumannii AB059] gi|332850712|ref|ZP_08432959.1| protein-(glutamine-N5) methyltransferase [Acinetobacter baumannii 6013150] gi|332866987|ref|ZP_08437304.1| protein-(glutamine-N5) methyltransferase [Acinetobacter baumannii 6013113] gi|169148451|emb|CAM86317.1| methyl transferase [Acinetobacter baumannii AYE] gi|213057695|gb|ACJ42597.1| protein methylase, HemK family [Acinetobacter baumannii AB0057] gi|213988463|gb|ACJ58762.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Acinetobacter baumannii AB307-0294] gi|332730549|gb|EGJ61865.1| protein-(glutamine-N5) methyltransferase [Acinetobacter baumannii 6013150] gi|332734316|gb|EGJ65444.1| protein-(glutamine-N5) methyltransferase [Acinetobacter baumannii 6013113] Length = 271 Score = 264 bits (675), Expect = 1e-68, Method: Composition-based stats. Identities = 82/256 (32%), Positives = 123/256 (48%), Gaps = 10/256 (3%) Query: 9 SFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLS 68 L ++S ++ + L +Q + R E + + G + F+ + L ++ Sbjct: 23 WLLEYFLKINSLELKFRLEQELTAQQEQDYLAGLERIQNGEPLAYVTGSQPFWTLDLKVT 82 Query: 69 SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128 SDT PRP+TE+LV++ L +LP+ I+DLGTGTGA+ LAL E P + D Sbjct: 83 SDTLVPRPDTEVLVETVLNLNLPK-----NANIVDLGTGTGAIALALASERPDWFVTATD 137 Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEV 187 I L++AK NA T+G+ WF ++E FD+IVSNPPYI+ + Sbjct: 138 IYAPTLDVAKENAQTHGL-HHVKFACGAWFEALEPQQFDLIVSNPPYIDPEDEHM---QA 193 Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLV 247 +PR +L GL+ I L G ++E GY+Q V IF + Sbjct: 194 LATEPRRALVADHHGLADIEIIIAQGKNWLKPQGWIALEHGYDQGQAVRGIFAEHGFSEI 253 Query: 248 NAFKDYGGNDRVLLFC 263 + +DYG NDRV L C Sbjct: 254 KSIQDYGRNDRVTLAC 269 >gi|332285703|ref|YP_004417614.1| heme biosynthesis protein [Pusillimonas sp. T7-7] gi|330429656|gb|AEC20990.1| heme biosynthesis protein [Pusillimonas sp. T7-7] Length = 285 Score = 264 bits (675), Expect = 1e-68, Method: Composition-based stats. Identities = 78/259 (30%), Positives = 122/259 (47%), Gaps = 9/259 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 + H +V +S +I L + R L E + ILG+++F Sbjct: 26 PRLEVHMLWQQVLQVSRAWLIAHDRDPLAPEAIARFHDLQARRLAGEPMAYILGYKEFMG 85 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 +S PRPETELLV++AL + +++ R+LDLGTG GA+ +++ + Sbjct: 86 RDFRVSPGVLIPRPETELLVETALDY----LQRCRAPRVLDLGTGAGAIAISIALNASGA 141 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL--FDVIVSNPPYIESVIV 180 D+S AL +A+ NA G R + L W+ ++ G FD+IVSNPPYI + Sbjct: 142 SIAATDVSMDALAVARQNAQALGA--RVEFLSGSWYDALVGHSGFDLIVSNPPYIAACDP 199 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 ++R F+P +L G DGLS RTI G L +E G++Q V ++ + Sbjct: 200 HLAQGDLR-FEPVQALTDGSDGLSALRTIVQGAGARLKPGAALFLEHGWDQAKAVRQLLQ 258 Query: 241 SRKLFLVNAFKDYGGNDRV 259 V + +D G +RV Sbjct: 259 QAGFTQVASLQDLAGIERV 277 >gi|301299953|ref|ZP_07206180.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Lactobacillus salivarius ACS-116-V-Col5a] gi|300852435|gb|EFK80092.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Lactobacillus salivarius ACS-116-V-Col5a] Length = 279 Score = 264 bits (675), Expect = 1e-68, Method: Composition-based stats. Identities = 86/258 (33%), Positives = 130/258 (50%), Gaps = 7/258 (2%) Query: 4 LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63 L D +C G Q++++ + +DD+ L I + + ++G++DFY + Sbjct: 24 LEDVDYLICGQMGWDKTQLLMNYRTRIDDKNYQELQEKIELYNQDYPLQYLIGYQDFYGL 83 Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 RL ++ DT PRPETE LVD L + K + +LD+GTGTGA+ LAL + Sbjct: 84 RLKVTKDTLIPRPETEELVDWILNDN----SKNENYDVLDVGTGTGAIGLALKSIRSNWN 139 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183 DIS AL++AK NA + F T SD F +EG D+IVSNPPYI + Sbjct: 140 IFLSDISEPALKVAKENAQNLNLDVSFST--SDLFEKIEGKKDIIVSNPPYISENEKIYM 197 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR- 242 V +++P +L +GL Y IA+ + L + +EIG+ Q V +IF+ Sbjct: 198 DKSVLNYEPHQALFAKNNGLEIYERIANESGKLLKQGSKIYMEIGFLQGEAVKKIFKDNF 257 Query: 243 KLFLVNAFKDYGGNDRVL 260 + KD GNDR++ Sbjct: 258 PNSEITLKKDINGNDRMI 275 >gi|50085502|ref|YP_047012.1| methyl transferase [Acinetobacter sp. ADP1] gi|49531478|emb|CAG69190.1| methyl transferase [Acinetobacter sp. ADP1] Length = 274 Score = 264 bits (675), Expect = 1e-68, Method: Composition-based stats. Identities = 85/261 (32%), Positives = 136/261 (52%), Gaps = 10/261 (3%) Query: 4 LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63 +++ L + L+S ++ + +L Q + ++R K E + I G + F+++ Sbjct: 18 RQEAMWLLEHILELNSLELKMRQMQILTQEQEQQYLDGLMRLSKGEPLAYITGSQPFWSL 77 Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 L ++ DT PRP+TE+L+++ L+ LP + ++DLGTGTGA+ L+L KE P++K Sbjct: 78 DLNVTPDTLVPRPDTEILIETVLSLDLP-----EHCSMVDLGTGTGAIALSLAKERPYWK 132 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDC 182 + DI LE+A+SNA + + + L S WF ++ FD+IVSNPPYI++ Sbjct: 133 ILATDIYFPTLEVAQSNAKKHAL-NQVKFLCSAWFEAIPSQKFDLIVSNPPYIDANDEHM 191 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 L +PR +L GL+ I LN G +VE GY+Q V ++ Sbjct: 192 LN---LGTEPRRALVADKHGLADLEQIIGQAVLWLNTHGWIAVEHGYDQGQAVCQLLMDH 248 Query: 243 KLFLVNAFKDYGGNDRVLLFC 263 V KDYGGNDR+ L Sbjct: 249 NFAKVQTCKDYGGNDRISLGQ 269 >gi|260576768|ref|ZP_05844753.1| modification methylase, HemK family [Rhodobacter sp. SW2] gi|259021020|gb|EEW24331.1| modification methylase, HemK family [Rhodobacter sp. SW2] Length = 284 Score = 264 bits (675), Expect = 1e-68, Method: Composition-based stats. Identities = 91/262 (34%), Positives = 134/262 (51%), Gaps = 8/262 (3%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 A RD+ L GL ++ + L L + + + + +I G R F+ Sbjct: 23 DAARDARHLLAHAMGLPPDRLTLHLADPLTPDAAALLAANLAARSQRQPVSQITGNRLFW 82 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 ++ D +PRPETE L+ +ALA + R+LDLGTG+G + L LL E P Sbjct: 83 GRNFRVTQDVLDPRPETESLIAAALA--------QPFQRVLDLGTGSGVLLLTLLAERPA 134 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181 G+G+D+S AL +A++NA T ++ R SDW ++V G +D++V+NPPYI + Sbjct: 135 ASGLGIDLSPAALNVAQANAETLSLANRATFALSDWLTAVPGQYDLVVANPPYIAEAEMA 194 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 L EVR ++P ++L G DGL YR IA GV+ HL G VEIG Q V +F + Sbjct: 195 ALAPEVRLWEPHLALTPGGDGLDAYRAIAAGVAPHLAPGGRLLVEIGPTQAQAVSGLFRA 254 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 L + D G DRV+ Sbjct: 255 CGLPDIRVLPDLDGRDRVISAQ 276 >gi|312863896|ref|ZP_07724134.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptococcus vestibularis F0396] gi|311101432|gb|EFQ59637.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptococcus vestibularis F0396] Length = 277 Score = 264 bits (675), Expect = 1e-68, Method: Composition-based stats. Identities = 81/247 (32%), Positives = 126/247 (51%), Gaps = 8/247 (3%) Query: 17 LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRP 76 ++ + + L + + H+ ILG+ DF+ +R + PRP Sbjct: 34 WDLTHFVLQLRQEVSEEDAELLAHVFSQLKNHKPAQYILGYEDFHGLRFQVDERVLIPRP 93 Query: 77 ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136 ET+ LVD LA + ++ILD+GTG+GA+ ++L K PF++ D+S AL + Sbjct: 94 ETKELVDLILAEN-----PSSELKILDIGTGSGAISVSLKKSCPFWQVTASDLSADALVL 148 Query: 137 AKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL 196 AK NA N V +QSD F ++ G FD+IVSNPPYI D +GL V +P+++L Sbjct: 149 AKENAKLNQVD--ISFVQSDVFENISGSFDIIVSNPPYISENDKDEVGLNVLTSEPKMAL 206 Query: 197 DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDYGG 255 +GL+ YR I + +++L G EIGY Q +D+ R+ V KD G Sbjct: 207 FADEEGLAIYRQIIEDATKYLTPKGKLYFEIGYKQGLDLKRLLSLHFPDKHVRILKDQFG 266 Query: 256 NDRVLLF 262 DR+++ Sbjct: 267 QDRMVVM 273 >gi|255994692|ref|ZP_05427827.1| protein-(glutamine-N5) methyltransferase [Eubacterium saphenum ATCC 49989] gi|255993405|gb|EEU03494.1| protein-(glutamine-N5) methyltransferase [Eubacterium saphenum ATCC 49989] Length = 307 Score = 264 bits (675), Expect = 1e-68, Method: Composition-based stats. Identities = 95/271 (35%), Positives = 134/271 (49%), Gaps = 14/271 (5%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQ---------RFFLTNAIVRSLKHESIH 52 A ++ C G+S ++++ L RQ + I R LK + + Sbjct: 33 DAQGEAVCLFCFAAGISKSELLLRQSRALSPRQGRSAFGEDVYRKYDSIIARRLKRKPLQ 92 Query: 53 RILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFS--LPRIEKRDVVRILDLGTGTGA 110 ILG +F+ + PR ETELLV+ L L + +++LDL TGTG Sbjct: 93 HILGSVNFFGFDFKVDERALIPRFETELLVEKTLEKIEVLQNETREKSIKVLDLCTGTGV 152 Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIV 169 + + + K P + DIS ALE+A N+ + R +QSD F + FD+IV Sbjct: 153 IGITVKKTIPDVECTLSDISSDALELAADNSKSLKADVRI--VQSDLFEEFADEKFDIIV 210 Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY 229 SNPPYI +D L LEVR+FDP ++LDGG DGL YR IAD V +L + G EIG Sbjct: 211 SNPPYIRRADIDKLQLEVREFDPHLALDGGEDGLELYRNIADEVQNYLKRSGYLICEIGA 270 Query: 230 NQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 +Q DVV+IF+ KD+ DR+L Sbjct: 271 DQGDDVVKIFKEAGAVNARIIKDFTDKDRIL 301 >gi|21674307|ref|NP_662372.1| HemK protein [Chlorobium tepidum TLS] gi|21647480|gb|AAM72714.1| hemK protein [Chlorobium tepidum TLS] Length = 294 Score = 264 bits (675), Expect = 1e-68, Method: Composition-based stats. Identities = 78/263 (29%), Positives = 125/263 (47%), Gaps = 8/263 (3%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 + + L V GL Q+ +D + L ++ A L+ + I G FY Sbjct: 27 EPRLSAELLLGHVLGLQRLQLYLDHERPLTLKELEAFRAACRERLQGRPVQYIAGEAFFY 86 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAF-SLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120 + + PRPETEL+++ A+ + ++ D ILD+GTG+G + + L P Sbjct: 87 GYQFFVDERVLIPRPETELVLEHAMERLAASGLDSADSPSILDVGTGSGCIAITLALRLP 146 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS-----SVEGLFDVIVSNPPYI 175 + D+S AL++A+ NA +GVSER +++D S +V G FD++VSNPPYI Sbjct: 147 GARVTAADVSADALDVARRNADAHGVSERIRFVEADALSASFADAVGGPFDLLVSNPPYI 206 Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235 L EVR ++PR++L G +Y++IA L K G+ E+ + +V Sbjct: 207 PEAEWATLQEEVRRYEPRLALVA-PTGFEYYQSIAVAAPSLLRKGGVLCFELHADGAAEV 265 Query: 236 VRIFESRKLFLVNAFKDYGGNDR 258 + S V +DY DR Sbjct: 266 RNLLGSS-FADVQVMQDYNKLDR 287 >gi|327462228|gb|EGF08555.1| protein-(glutamine-N5) methyltransferase [Streptococcus sanguinis SK1] gi|327489583|gb|EGF21375.1| protein-(glutamine-N5) methyltransferase [Streptococcus sanguinis SK1058] Length = 276 Score = 264 bits (675), Expect = 1e-68, Method: Composition-based stats. Identities = 85/262 (32%), Positives = 127/262 (48%), Gaps = 11/262 (4%) Query: 3 ALRDSHSF--LCRVTG-LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRD 59 A ++ S + R LS ++ + + R L + L H+ I+G D Sbjct: 17 AGEEAESLSFVYRALNKLSFTDFVLKLQTEVSLEDREQLKAIQEQLLAHKPAQYIIGSSD 76 Query: 60 FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119 F+ + L + PRPETE LV+ L+ + + ILD+GTG+GA+ L L Sbjct: 77 FHGLTLKVDERVLIPRPETEELVELILSENRE-----SSLSILDIGTGSGAIALTLANSR 131 Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179 P ++ D+S AL +A NA + G+S +QSD F ++ G FD+IVSNPPYI Sbjct: 132 PDWQITASDLSGDALSLATENAQSCGLS--LTFIQSDCFEAISGNFDIIVSNPPYISEAD 189 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 D +GL V +P ++L DG + YR IA+ HL K G +EIGY Q V + Sbjct: 190 KDEVGLNVLTSEPHMALFAEEDGYAVYRKIAEQAGDHLTKKGKIYLEIGYKQGDGVRELL 249 Query: 240 ESR-KLFLVNAFKDYGGNDRVL 260 + + KD G DR++ Sbjct: 250 KKSFPQKRIRVLKDRFGKDRMV 271 >gi|332970820|gb|EGK09799.1| protein-(glutamine-N5) methyltransferase [Psychrobacter sp. 1501(2011)] Length = 300 Score = 264 bits (675), Expect = 1e-68, Method: Composition-based stats. Identities = 84/283 (29%), Positives = 130/283 (45%), Gaps = 26/283 (9%) Query: 1 MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60 + A S L + S +I D L + ++ I + + + G + F Sbjct: 20 LPAHWVSDWLL-HILQKSPSFLITDGGYQLTEAEQAQFNTGIAQMQASTPLAYLTGKQAF 78 Query: 61 YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR---------ILDLGTGTGAV 111 +++ ++ T PRP+TE+LV+ L + V+ +LDLGTG+G + Sbjct: 79 WSLEFEVNEYTLIPRPDTEVLVEQVLDWITQHKNSLSVLNDEPILAPYQLLDLGTGSGCI 138 Query: 112 CLALLKES-----PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---- 162 ++L E ++ +D S +AL +AK NA N VS LQSDWFS+++ Sbjct: 139 AISLAHELATIYPKQWQVTALDFSTEALAVAKRNAQLNAVS-NIQFLQSDWFSALKRSED 197 Query: 163 ---GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 LFD+IVSNPPYI + +P +L +GL + I + +L + Sbjct: 198 TDQPLFDIIVSNPPYIVDNDQHL---DKLKAEPLSALVAPDNGLGDIKQIVEQARDYLVR 254 Query: 220 DGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262 GL +VE GY+Q V ++F V KDYGGNDRV L Sbjct: 255 GGLLAVEHGYDQGELVCQMFTDFGYAQVKTLKDYGGNDRVTLG 297 >gi|228968457|ref|ZP_04129446.1| Protein hemK [Bacillus thuringiensis serovar sotto str. T04001] gi|228791237|gb|EEM38850.1| Protein hemK [Bacillus thuringiensis serovar sotto str. T04001] Length = 283 Score = 263 bits (674), Expect = 1e-68, Method: Composition-based stats. Identities = 70/259 (27%), Positives = 118/259 (45%), Gaps = 7/259 (2%) Query: 8 HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67 LC V ++ ++++ +++ Q T I + ++ I ++G+ FY + Sbjct: 25 EIVLCHVLKMNRTGLLMNMREEINEEQEASFTEFIHKHVEGIPIQYMIGYEMFYGRSFFV 84 Query: 68 SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 + + PRPETE L+ L ++ + + D+GTG+GA+ + L E+ V Sbjct: 85 NEEVLIPRPETEELIVGVLERIERHFGDKE-LHVADIGTGSGAISITLALENKNLHVYTV 143 Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG---LFDVIVSNPPYIESVIVDCLG 184 DI+ +++E+AK NA G D S DV+VSNPPYI L Sbjct: 144 DIAQESIEVAKENAKALGAE--VTFYHGDLLSPFHKAGQKLDVVVSNPPYIPEEDWRGLS 201 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-K 243 V++ +P+ +L GG DGL YR + + L + + + EIG Q DV R+ + Sbjct: 202 PVVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQEKAIVAFEIGVGQGEDVKRLLQQAFP 261 Query: 244 LFLVNAFKDYGGNDRVLLF 262 V D G DR++ Sbjct: 262 HAHVEVVFDINGKDRMVFA 280 >gi|169633251|ref|YP_001706987.1| methyl transferase [Acinetobacter baumannii SDF] gi|169152043|emb|CAP00927.1| methyl transferase [Acinetobacter baumannii] Length = 273 Score = 263 bits (674), Expect = 1e-68, Method: Composition-based stats. Identities = 81/255 (31%), Positives = 121/255 (47%), Gaps = 10/255 (3%) Query: 9 SFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLS 68 L ++S ++ + L +Q + R E + + G + F+ + L ++ Sbjct: 23 WLLEHFLKINSLELKFRLEQELTAQQEQDYLAGLERIQNGEPLAYVTGSQPFWTLDLKVT 82 Query: 69 SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128 SDT PRP+TE+LV++ L +LP+ I+DLGTGTGA+ LAL E P + D Sbjct: 83 SDTLVPRPDTEVLVETVLNLNLPK-----NANIVDLGTGTGAIALALASERPDWFVTATD 137 Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEV 187 I LE+AK NA T+G+ W+ ++E FD+IVSNPPYI+ + Sbjct: 138 IYAPTLEVAKENAQTHGL-HHVKFACGVWYEALEPQQFDLIVSNPPYIDPEDEHM---QA 193 Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLV 247 +PR +L GL+ I L G ++E GY+Q V IF + Sbjct: 194 LATEPRRALVADHHGLADIEIIIAQGKNWLKPQGWIALEHGYDQGQAVRGIFAEHGFSEI 253 Query: 248 NAFKDYGGNDRVLLF 262 +DYG NDRV L Sbjct: 254 RTIQDYGRNDRVTLA 268 >gi|256845603|ref|ZP_05551061.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Fusobacterium sp. 3_1_36A2] gi|256719162|gb|EEU32717.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Fusobacterium sp. 3_1_36A2] Length = 383 Score = 263 bits (674), Expect = 1e-68, Method: Composition-based stats. Identities = 79/265 (29%), Positives = 137/265 (51%), Gaps = 8/265 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTN-AIVRSLKHESIHRILGWRDFY 61 L D+ V +S + + + + + + ++R+ K + + ILG +FY Sbjct: 104 PLLDTEYIFSDVLKVSRNTLKYSMSREIKEEDKDKIREMLVLRAKKRKPLQYILGEWEFY 163 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 + +S PR +TE+LV+ + E ILD+G+G+GA+ +A+ E Sbjct: 164 GLPFKVSEGVLIPRADTEILVEQCIQLMREVEEPN----ILDIGSGSGAISIAIANELKS 219 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVI 179 G+DI+ KA+E+A N N + E + ++SD F ++ +D+IVSNPPYI Sbjct: 220 SSVTGIDINEKAIELANENKTLNKI-ENVNFIKSDLFEKIDKDFKYDLIVSNPPYISKNE 278 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 + L EV++++P+ +L DGL YR ++ +L + EIGYNQ DV +I Sbjct: 279 YETLMSEVKNYEPQNALTDLGDGLYFYREMSKLAGEYLKDTAYLAYEIGYNQAKDVTKIL 338 Query: 240 ESRKLFLVNAFKDYGGNDRVLLFCR 264 ++ +++ KDYGGNDRV++ + Sbjct: 339 QNNNFDILSVIKDYGGNDRVVIAKK 363 Score = 40.9 bits (95), Expect = 0.19, Method: Composition-based stats. Identities = 3/45 (6%), Positives = 18/45 (40%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK 47 ++ + V L + + + L + ++ + + + + ++ Sbjct: 22 PRLEAEKLVSYVLNLDRIALYIHYERELSEEEKNSIKHYLKKMVE 66 >gi|308050534|ref|YP_003914100.1| (protein release factor)-glutamine N5-methyltransferase [Ferrimonas balearica DSM 9799] gi|307632724|gb|ADN77026.1| (protein release factor)-glutamine N5-methyltransferase [Ferrimonas balearica DSM 9799] Length = 279 Score = 263 bits (674), Expect = 1e-68, Method: Composition-based stats. Identities = 82/261 (31%), Positives = 125/261 (47%), Gaps = 9/261 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 D+ L G + P+ L + L + R E + + G R+F++ Sbjct: 21 PRLDAELLLLSRLGKPRSFLFTWPEHELPEPLVANLAGLLARRQAGEPVAHLTGQREFWS 80 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +++ T PRP+TE LV++AL LP D ++DLGTGTGA+ LAL E P + Sbjct: 81 LPLKVNATTLIPRPDTESLVEAALELGLP-----DDAEVVDLGTGTGAIALALKSEQPGW 135 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181 + VD A+ +A++N+ + WF + G FD+IVSNPPYI+ Sbjct: 136 RISAVDRIADAVALARANSEALDLP--ITVHHGSWFEPLSGQRFDLIVSNPPYIDPQDPH 193 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+PR +L GL+ R +A+ + HL G+ VE G++Q V IF Sbjct: 194 LGQGDVR-FEPRSALTADDHGLADIRHLAEAAANHLRAGGVLMVEHGWDQGEAVREIFRQ 252 Query: 242 RKLFLVNAFKDYGGNDRVLLF 262 L V +D G +R L Sbjct: 253 AGLTSVRTGRDLGNRERFTLG 273 >gi|229099761|ref|ZP_04230686.1| Protein hemK [Bacillus cereus Rock3-29] gi|228683650|gb|EEL37603.1| Protein hemK [Bacillus cereus Rock3-29] Length = 283 Score = 263 bits (674), Expect = 1e-68, Method: Composition-based stats. Identities = 70/259 (27%), Positives = 115/259 (44%), Gaps = 7/259 (2%) Query: 8 HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67 LC V + ++++ + Q I + ++ I +LG+ FY + Sbjct: 25 ELVLCHVLKTNRTGMLMNMREEITAEQEKSFAEFIHKHVEGIPIQYMLGYEMFYGRSFFV 84 Query: 68 SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 + + PRPETE L+ L + + + D+GTG+GA+ + L E+ V Sbjct: 85 NEEVLIPRPETEELIVGVLERIERHF-GNEKLHVADIGTGSGAISITLALENKNLHVYTV 143 Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSS---VEGLFDVIVSNPPYIESVIVDCLG 184 DI+ +++E+AK NA + G D S ++ DV+VSNPPYI L Sbjct: 144 DIARESIEVAKENAKSLGAE--VTFYHGDLLSPFYKIDQKLDVVVSNPPYIPEEDWRGLS 201 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES-RK 243 V++ +P+ +L GG DGL YR + + L K + + EIG Q DV + + Sbjct: 202 PVVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEIGVGQGEDVKELLQQVFP 261 Query: 244 LFLVNAFKDYGGNDRVLLF 262 V D G DR++ Sbjct: 262 YAHVEVVFDINGKDRMVFA 280 >gi|312134917|ref|YP_004002255.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Caldicellulosiruptor owensensis OL] gi|311774968|gb|ADQ04455.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Caldicellulosiruptor owensensis OL] Length = 288 Score = 263 bits (674), Expect = 1e-68, Method: Composition-based stats. Identities = 72/258 (27%), Positives = 125/258 (48%), Gaps = 8/258 (3%) Query: 7 SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66 + + + + +VI++ D ++ + + NAI + L+ + F + Sbjct: 34 ALMMVSHILDIDKTEVILNKDLPVEQDKYEKIVNAISKYLQDYPLQYCTNKAFFMGLEFY 93 Query: 67 LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126 + + PR +TE+LV+ A+ + R + LD+GTG+G + +AL + K + Sbjct: 94 VDENVLIPRFDTEVLVEVAIEI----FKGRKNLYFLDIGTGSGCIAVALCRFL-DCKVLA 148 Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCLG 184 VDIS +ALE+A+ NA NGV R ++S+ F ++ FD I+SNPPYI L Sbjct: 149 VDISERALEVARKNAKLNGVENRVSFVRSNLFENIPKNLRFDAILSNPPYISESERFKLE 208 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 +V +P I+L DGL ++ IA+ +L G E+G++Q +V RI E Sbjct: 209 KQVLK-EPHIALFSKEDGLWFFKEIANKAKLYLKDGGYIIFEVGFSQAEEVKRILEQNGY 267 Query: 245 FLVNAFKDYGGNDRVLLF 262 + + KD +R + Sbjct: 268 ENIKSRKDLNNIERCIFA 285 >gi|229072795|ref|ZP_04205994.1| Protein hemK [Bacillus cereus F65185] gi|228710286|gb|EEL62261.1| Protein hemK [Bacillus cereus F65185] Length = 283 Score = 263 bits (674), Expect = 1e-68, Method: Composition-based stats. Identities = 71/259 (27%), Positives = 116/259 (44%), Gaps = 7/259 (2%) Query: 8 HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67 LC V ++ ++++ + + Q T I + ++ I ++G+ FY + Sbjct: 25 EIVLCHVLKVNRTGLLMNMREEITEDQEKSFTEFIHKHVEGTPIQYMIGYEMFYGRSFFV 84 Query: 68 SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 + + PRPETE L+ L + + + D+GTG+GA+ + L E+ V Sbjct: 85 NEEVLIPRPETEELIVGVLERIERHF-GDEKLHVADIGTGSGAISITLALENENLHVYTV 143 Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG---LFDVIVSNPPYIESVIVDCLG 184 DI+ +++E+AK NA G D S DV+VSNPPYI L Sbjct: 144 DIAQESIEVAKENAKALGAE--VTFYHGDLLSPFHKTGQKLDVVVSNPPYIPEEDWRGLS 201 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-K 243 V++ +P+ +L GG DGL YR + + L K + + EIG Q DV R+ + Sbjct: 202 PVVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEIGVGQGEDVKRLLQQAFP 261 Query: 244 LFLVNAFKDYGGNDRVLLF 262 V D G DR++ Sbjct: 262 HAHVEVVFDINGKDRMVFA 280 >gi|146318503|ref|YP_001198215.1| methylase of polypeptide chain release factors [Streptococcus suis 05ZYH33] gi|146320694|ref|YP_001200405.1| methylase of polypeptide chain release factors [Streptococcus suis 98HAH33] gi|253751629|ref|YP_003024770.1| methyltransferase [Streptococcus suis SC84] gi|253753531|ref|YP_003026672.1| methyltransferase [Streptococcus suis P1/7] gi|253755644|ref|YP_003028784.1| methyltransferase [Streptococcus suis BM407] gi|145689309|gb|ABP89815.1| Methylase of polypeptide chain release factors [Streptococcus suis 05ZYH33] gi|145691500|gb|ABP92005.1| Methylase of polypeptide chain release factors [Streptococcus suis 98HAH33] gi|251815918|emb|CAZ51532.1| putative methyltransferase [Streptococcus suis SC84] gi|251818108|emb|CAZ55902.1| putative methyltransferase [Streptococcus suis BM407] gi|251819777|emb|CAR45684.1| putative methyltransferase [Streptococcus suis P1/7] gi|292558284|gb|ADE31285.1| Modification methylase HemK [Streptococcus suis GZ1] gi|319758067|gb|ADV70009.1| methylase of polypeptide chain release factors [Streptococcus suis JS14] Length = 277 Score = 263 bits (674), Expect = 1e-68, Method: Composition-based stats. Identities = 83/248 (33%), Positives = 124/248 (50%), Gaps = 8/248 (3%) Query: 16 GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75 GL+ + ++ + + + + +H I+G DF+ + + PR Sbjct: 33 GLNFTEFLLLLRQEVTPTDKEEIDAIFQQLSQHRPAQYIIGKADFHGLEFAVDERVLIPR 92 Query: 76 PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135 PETE LVD L + +RILD+GTG+GA+ ++L K P ++ V VDIS AL Sbjct: 93 PETEELVDLILQEN-----SGASLRILDIGTGSGAIAISLAKARPDWEVVAVDISNDALA 147 Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195 +A+ NA TN VS L+SD +V G FD+IVSNPPYI D +GL V +P ++ Sbjct: 148 VAQENARTNQVS--VHFLESDVLQAVTGKFDIIVSNPPYISPDDTDEVGLNVLTSEPHLA 205 Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDYG 254 L DG++ YR IA+ L ++G EIGY Q D+ + + KD Sbjct: 206 LFAEEDGMAIYRQIAEQAGAFLKENGKLYFEIGYKQGQDLTDLLALHFPQKQIRVLKDQF 265 Query: 255 GNDRVLLF 262 G DR ++ Sbjct: 266 GQDRKVVA 273 >gi|309782947|ref|ZP_07677667.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Ralstonia sp. 5_7_47FAA] gi|308918371|gb|EFP64048.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Ralstonia sp. 5_7_47FAA] Length = 300 Score = 263 bits (674), Expect = 1e-68, Method: Composition-based stats. Identities = 78/262 (29%), Positives = 118/262 (45%), Gaps = 11/262 (4%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 ++ + VTGLS Q+I +D R ++ R L E + +LG R+F+ Sbjct: 28 PALEARMLVSHVTGLSRVQLITQDACAIDVAARARISELAARRLAGEPMAYLLGEREFFG 87 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 ++ PRP+TELLV+ AL +E+ D +LD+GTG+G + + + Sbjct: 88 RTFKVTPAVLIPRPDTELLVEQALD----HLEECDAPAVLDMGTGSGIIAITIALARRDA 143 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-----FDVIVSNPPYIES 177 + D S AL +A NA G + DW+ ++ G FD+I SNPPYI + Sbjct: 144 RVWATDASTDALAVAIDNAKALGAT-NVQAALGDWYGALAGTEAPPAFDLIASNPPYIAA 202 Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237 ++R F+P +L DGL H R+I G L G VE GY+Q V Sbjct: 203 TDAHLDQGDLR-FEPASALTDHDDGLRHLRSIVAGAPARLVSGGWLLVEHGYDQGEPVRA 261 Query: 238 IFESRKLFLVNAFKDYGGNDRV 259 + V +D G+DR Sbjct: 262 LLGGAGFANVFTAQDLAGHDRC 283 >gi|310829055|ref|YP_003961412.1| hemK protein [Eubacterium limosum KIST612] gi|308740789|gb|ADO38449.1| hemK protein [Eubacterium limosum KIST612] Length = 304 Score = 263 bits (674), Expect = 1e-68, Method: Composition-based stats. Identities = 80/267 (29%), Positives = 127/267 (47%), Gaps = 4/267 (1%) Query: 1 MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60 + D+ L V + DP + + I R E + I G ++F Sbjct: 38 VSPRLDAEVLLASVLNCARITFYSDPQKAVSFEDAEEYRSRIDRRALLEPVAYITGEKEF 97 Query: 61 YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALLKES 119 + +S D PRP+TE LV++ L +P+I++ R+LDL TG+GA+ L+L Sbjct: 98 MGLVFHVSPDVLIPRPDTESLVEAILERVIPQIKQDTGKPRVLDLCTGSGAIGLSLKFFD 157 Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIES 177 P DIS +AL++A NA G S ++SD F + FD+IVSNPPYI Sbjct: 158 PSAVVTLTDISGRALKVAAENARNLGFS-NITMVESDLFKGLSKTEPFDLIVSNPPYIPD 216 Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237 I+ L ++ D++P ++L GG+ G Y IA +L K G +E+G Q+V V Sbjct: 217 GIIPTLQRDIVDYEPMLALSGGVTGYDLYERIAGETGPYLRKGGAIVLEVGNAQEVRVAE 276 Query: 238 IFESRKLFLVNAFKDYGGNDRVLLFCR 264 + E++ + D G R ++ + Sbjct: 277 LLEAQGFGAITMVPDLTGAVRGVVAWK 303 >gi|228924064|ref|ZP_04087340.1| Protein hemK [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228835554|gb|EEM80919.1| Protein hemK [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 283 Score = 263 bits (674), Expect = 1e-68, Method: Composition-based stats. Identities = 71/259 (27%), Positives = 117/259 (45%), Gaps = 7/259 (2%) Query: 8 HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67 LC V ++ ++++ + + Q T I + ++ I ++G+ FY + Sbjct: 25 EIVLCHVLKVNRTGLLMNMREEITEDQEKSFTEFIHKHVEGIPIQYMIGYEMFYGRSFFV 84 Query: 68 SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 + + PRPETE L+ L + + + D+GTG+GA+ + L E+ V Sbjct: 85 NEEVLIPRPETEELIVGVLERIERHF-GDEKLHVADIGTGSGAISITLALENENLHVYTV 143 Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIVDCLG 184 DI+ +++E+AK NA G D S + DV+VSNPPYI L Sbjct: 144 DIAQESIEVAKENAKALGAE--VTFYHGDLLSPFHKTDQKLDVVVSNPPYIPEEDWRGLS 201 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-K 243 V++ +P+ +L GG DGL YR + + L K + + EIG Q DV R+ + Sbjct: 202 PVVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEIGVGQGEDVKRLLQQAFP 261 Query: 244 LFLVNAFKDYGGNDRVLLF 262 V D G DR++ Sbjct: 262 HAHVEVVFDINGKDRMVFA 280 >gi|163743156|ref|ZP_02150538.1| modification methylase, HemK family protein [Phaeobacter gallaeciensis 2.10] gi|161383573|gb|EDQ07960.1| modification methylase, HemK family protein [Phaeobacter gallaeciensis 2.10] Length = 285 Score = 263 bits (674), Expect = 1e-68, Method: Composition-based stats. Identities = 95/259 (36%), Positives = 129/259 (49%), Gaps = 8/259 (3%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 RD+ L + + +V + L I + ++G R+FY Sbjct: 25 DPARDARVLLAHAARIEASRVTLIAPEDLAPEIAERYEQLIALRAIRVPVSHLIGEREFY 84 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 R +S D +PRPETE L+++ALA R+LDLG G+G + + LL E Sbjct: 85 GRRFKVSGDVLDPRPETECLIEAALA--------EPFSRVLDLGLGSGCILVTLLAEQAD 136 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181 GVGVD+S A A +NAV + V R + LQSDWFS+VEG FD+IVSNPPYI + Sbjct: 137 ATGVGVDLSEAACLQASANAVLHRVEPRAEILQSDWFSAVEGQFDLIVSNPPYIALDEMS 196 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 L EVR +P ++L G DGL YR IA + +L G +EIG Q V + S Sbjct: 197 DLSDEVRGHEPELALTDGGDGLGAYRVIAAELGGYLAPQGRVFLEIGPTQGAAVSDLLLS 256 Query: 242 RKLFLVNAFKDYGGNDRVL 260 L V +D G DRV+ Sbjct: 257 AGLKEVRIIQDLDGRDRVV 275 >gi|228955576|ref|ZP_04117578.1| Protein hemK [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|229181576|ref|ZP_04308902.1| Protein hemK [Bacillus cereus 172560W] gi|229193580|ref|ZP_04320524.1| Protein hemK [Bacillus cereus ATCC 10876] gi|228589885|gb|EEK47760.1| Protein hemK [Bacillus cereus ATCC 10876] gi|228601944|gb|EEK59439.1| Protein hemK [Bacillus cereus 172560W] gi|228804104|gb|EEM50721.1| Protein hemK [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 283 Score = 263 bits (674), Expect = 1e-68, Method: Composition-based stats. Identities = 71/259 (27%), Positives = 116/259 (44%), Gaps = 7/259 (2%) Query: 8 HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67 LC V ++ ++++ + + Q T I + ++ I ++G+ FY + Sbjct: 25 EIVLCHVLKVNRTGLLMNMREEITEDQEKSFTEFIHKHVEGIPIQYMIGYEMFYGRSFFV 84 Query: 68 SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 + + PRPETE L+ L + + + D+GTG+GA+ + L E+ V Sbjct: 85 NEEVLIPRPETEELIVGVLERIERHF-GDEKLHVADIGTGSGAISITLALENENLHVYTV 143 Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG---LFDVIVSNPPYIESVIVDCLG 184 DI+ +++E+AK NA G D S DV+VSNPPYI L Sbjct: 144 DIAQESIEVAKENAKALGAE--VTFYHGDLLSPFHKTGQKLDVVVSNPPYIPEEDWRGLS 201 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-K 243 V++ +P+ +L GG DGL YR + + L K + + EIG Q DV R+ + Sbjct: 202 PVVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEIGVGQGEDVKRLLQQAFP 261 Query: 244 LFLVNAFKDYGGNDRVLLF 262 V D G DR++ Sbjct: 262 HAHVEVVFDINGKDRMVFA 280 >gi|206970195|ref|ZP_03231148.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacillus cereus AH1134] gi|206734772|gb|EDZ51941.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacillus cereus AH1134] Length = 283 Score = 263 bits (674), Expect = 1e-68, Method: Composition-based stats. Identities = 71/259 (27%), Positives = 116/259 (44%), Gaps = 7/259 (2%) Query: 8 HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67 LC V ++ ++++ + + Q T I + ++ I ++G+ FY + Sbjct: 25 EIVLCHVLKVNRTGLLMNMREEITEDQEKSFTEFIHKYVEGIPIQYMIGYEMFYGRSFFV 84 Query: 68 SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 + + PRPETE L+ L + + + D+GTG+GA+ + L E+ V Sbjct: 85 NEEVLIPRPETEELIVGVLERIERHF-GDEKLHVADIGTGSGAISITLALENENLHVYTV 143 Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG---LFDVIVSNPPYIESVIVDCLG 184 DI+ +++E+AK NA G D S DV+VSNPPYI L Sbjct: 144 DIAQESIEVAKENAKALGAE--VTFYHGDLLSPFHKTGQKLDVVVSNPPYIPEEDWRGLS 201 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-K 243 V++ +P+ +L GG DGL YR + + L K + + EIG Q DV R+ + Sbjct: 202 PVVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEIGVGQGEDVKRLLQQAFP 261 Query: 244 LFLVNAFKDYGGNDRVLLF 262 V D G DR++ Sbjct: 262 HAHVEVVFDINGKDRMVFA 280 >gi|113869290|ref|YP_727779.1| methylase of polypeptide chain release factor [Ralstonia eutropha H16] gi|113528066|emb|CAJ94411.1| methylase of polypeptide chain release factor [Ralstonia eutropha H16] Length = 274 Score = 263 bits (674), Expect = 1e-68, Method: Composition-based stats. Identities = 80/260 (30%), Positives = 123/260 (47%), Gaps = 8/260 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 + L VTGLS Q+I L QR + R L E + ++G R+F+ Sbjct: 5 PALEVRMLLTHVTGLSRTQLITRDTDTLTIAQRDAFATLLARRLAGEPMAYLIGEREFFG 64 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + ++ D PRP+T + A SL R+ + +LDLGTG+G + + L +E Sbjct: 65 RKFRVTPDVLIPRPDT----EVAAEASLARLAEVPQPTVLDLGTGSGILAVTLARERRDA 120 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIV 180 + DIS AL +A+ NA G ++R L SDW++++ F +IVSNPPYI + Sbjct: 121 QVWATDISPGALMVAQDNASALG-ADRIHFLVSDWYAALPPGLRFHLIVSNPPYIAAGDP 179 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 + ++R F+P +L DGLS R I G L DG +E GY+Q ++ E Sbjct: 180 HLVEGDLR-FEPIDALTDHDDGLSDLRAIVSGAGARLLPDGWLLMEHGYDQAQATRQLLE 238 Query: 241 SRKLFLVNAFKDYGGNDRVL 260 + +D G +R Sbjct: 239 DTGFTEIFTARDLAGLERCT 258 >gi|91974578|ref|YP_567237.1| HemK family modification methylase [Rhodopseudomonas palustris BisB5] gi|91681034|gb|ABE37336.1| modification methylase, HemK family [Rhodopseudomonas palustris BisB5] Length = 292 Score = 263 bits (674), Expect = 1e-68, Method: Composition-based stats. Identities = 107/262 (40%), Positives = 142/262 (54%), Gaps = 3/262 (1%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A D+ + VTGL +IV + +L Q L + R L E + RILG R+F+ Sbjct: 29 AELDARLLIGEVTGLDLTGLIVQAERLLAPDQAELLDGFVARRLAGEPVARILGAREFWG 88 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + LTLS+DT PRP+TE +V+ AL + R + ILD+G G+GA+ LALL E P Sbjct: 89 LPLTLSADTLVPRPDTETVVEVALEYLRAEAPARPL--ILDIGAGSGAILLALLSECPAA 146 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182 GV DIS AL A+SNA+ G+S R D+ S++ G FD+IVSNPPYI + + Sbjct: 147 FGVATDISLGALRAAQSNAIRLGLSNRAGFAVCDYASALIGPFDLIVSNPPYIPARDIAA 206 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 L EVRD DPR +LDGG DGL YR I R L G VE G Q +V + + Sbjct: 207 LDREVRDHDPRRALDGGDDGLDAYRRIVPESMRLLRPGGALVVEFGQGQSDEVAALMRAA 266 Query: 243 KLFLVN-AFKDYGGNDRVLLFC 263 L + +D GG R L+ Sbjct: 267 GLTVSGPPRRDLGGIFRALMGR 288 >gi|322385290|ref|ZP_08058935.1| protein-(glutamine-N5) methyltransferase [Streptococcus cristatus ATCC 51100] gi|321270549|gb|EFX53464.1| protein-(glutamine-N5) methyltransferase [Streptococcus cristatus ATCC 51100] Length = 276 Score = 263 bits (674), Expect = 1e-68, Method: Composition-based stats. Identities = 81/262 (30%), Positives = 127/262 (48%), Gaps = 11/262 (4%) Query: 3 ALRDSHSF--LCRVTG-LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRD 59 A ++ S + R LS ++ + ++ R L + L H+ I+G D Sbjct: 17 AGEEAESLSFVYRALNELSFTDFVLKLQAEVNQEDRDQLKAIHEQLLAHKPAQYIIGSSD 76 Query: 60 FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119 F+ + L + PRPETE LV+ L+ + + +LD+GTG+GA+ LAL Sbjct: 77 FHGLTLKVDERVLIPRPETEELVELILSEN-----PEKSLSVLDIGTGSGAIALALANSR 131 Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179 P ++ D+S AL +A NA + G+ +QSD ++ G FD+IVSNPPYI Sbjct: 132 PDWQITASDLSEDALALAAENAQSCGLD--LAFVQSDCMEAISGTFDIIVSNPPYISEAD 189 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 D +GL V +P ++L DG + YR IA+ +L + G +EIGY Q V + Sbjct: 190 KDEVGLNVLTSEPHMALFAEEDGYAVYRKIAEQAGDYLTEKGKIYLEIGYKQGDGVRELL 249 Query: 240 ESR-KLFLVNAFKDYGGNDRVL 260 + + KD G DR++ Sbjct: 250 KKSFPQKRIRVLKDQFGKDRMV 271 >gi|85705323|ref|ZP_01036422.1| Putative methylase [Roseovarius sp. 217] gi|85670196|gb|EAQ25058.1| Putative methylase [Roseovarius sp. 217] Length = 285 Score = 263 bits (674), Expect = 1e-68, Method: Composition-based stats. Identities = 91/258 (35%), Positives = 133/258 (51%), Gaps = 7/258 (2%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A D+ + L ++ ++ + ++ I R + + +ILG R F+ Sbjct: 22 AAGDARALLAGAVEIARDRLTLHLGDEVEPGAEARFEAMIARRMARAPVAKILGRRVFWG 81 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 +++D +PRPETE L+ ALA + +LDLGTG+G + + LL E P Sbjct: 82 REFEVTADVLDPRPETECLIAEALA-------GPKPLTLLDLGTGSGILAVTLLAEWPGV 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182 +GV +D+S +AL++A NA +GV +R SDWF+ + G FD+IVSNPPYI + Sbjct: 135 RGVALDLSAEALDVAARNAARHGVRDRLSLCHSDWFAQITGAFDLIVSNPPYIGRDEMVG 194 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 L EVRD DPR++L DGL+ YR IA HLN G VEIG+ Q V + + Sbjct: 195 LMPEVRDHDPRMALTDEGDGLTAYRVIAGAAGAHLNPGGRLMVEIGWTQGAAVADLLRAA 254 Query: 243 KLFLVNAFKDYGGNDRVL 260 V D G DRV+ Sbjct: 255 GFEAVAVLPDLEGRDRVV 272 >gi|73542730|ref|YP_297250.1| modification methylase HemK [Ralstonia eutropha JMP134] gi|72120143|gb|AAZ62406.1| Modification methylase HemK [Ralstonia eutropha JMP134] Length = 289 Score = 263 bits (674), Expect = 1e-68, Method: Composition-based stats. Identities = 79/262 (30%), Positives = 119/262 (45%), Gaps = 8/262 (3%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 ++ L VTGL+ Q+I L QR + R L E + ++G R+F+ + Sbjct: 30 LEARMLLTHVTGLTRTQLITRDGDTLTLPQRDAFATLLARRLAGEPMAYLIGEREFFGRK 89 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 ++ D PRP+T + A SL R+ R+LDLGTG+G + + + +E + Sbjct: 90 FRVTPDVLIPRPDT----EIAAESSLARLAGVPHPRVLDLGTGSGILAVTIARERTDAEV 145 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDC 182 DIS AL +A+ NA G + R L SDW++++ F +IVSNPPYI Sbjct: 146 WATDISPGALMVAQDNASALG-ANRIHFLVSDWYAALPAELHFHLIVSNPPYIAEGDPHL 204 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 + ++R F+P +L DGLS I G L G +E GY+Q + E Sbjct: 205 IEGDLR-FEPIDALTDHKDGLSDLAAIVAGAHGRLLPGGWLLMEHGYDQAEATQGLLERA 263 Query: 243 KLFLVNAFKDYGGNDRVLLFCR 264 V +D G R R Sbjct: 264 GFTEVFTARDLAGQQRCTGGRR 285 >gi|306833420|ref|ZP_07466547.1| protein-(glutamine-N5) methyltransferase [Streptococcus bovis ATCC 700338] gi|304424190|gb|EFM27329.1| protein-(glutamine-N5) methyltransferase [Streptococcus bovis ATCC 700338] Length = 276 Score = 263 bits (674), Expect = 2e-68, Method: Composition-based stats. Identities = 79/248 (31%), Positives = 124/248 (50%), Gaps = 8/248 (3%) Query: 16 GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75 G + I+ + + ++ + L +V+ H S I G F ++ L++ PR Sbjct: 33 GWTLLDFILHQNQAITEKDQMLLEQIMVQLTAHRSPQYITGKAYFRDLELSVDERVLIPR 92 Query: 76 PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135 PETE LVD L + R +R+LD+GTG+GA+ ++L P ++ DIS AL+ Sbjct: 93 PETEELVDLVLKEN-----SRADLRVLDIGTGSGAIAISLKAARPNWQVTASDISADALQ 147 Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195 + K NA+ N V +QSD FS + FD+I+SNPPYI D +G+ V +P ++ Sbjct: 148 LVKENALKNQVE--LTLIQSDVFSQITERFDMIISNPPYIAYDDEDEVGINVLASEPHLA 205 Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDYG 254 L +G + YR I + S HL ++G EIGY Q + + V KD Sbjct: 206 LFADENGFAIYRQIIENASEHLTENGKLYFEIGYKQGEGLRALLSKHFPAKRVRVIKDMF 265 Query: 255 GNDRVLLF 262 G DR+++ Sbjct: 266 GKDRMVVM 273 >gi|299065548|emb|CBJ36719.1| N5-glutamine methyltransferase, modifies release factors RF-1 and RF-2 [Ralstonia solanacearum CMR15] Length = 306 Score = 263 bits (674), Expect = 2e-68, Method: Composition-based stats. Identities = 87/262 (33%), Positives = 123/262 (46%), Gaps = 11/262 (4%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 ++ + VTGLS Q+I +DD R L R L E + +LG R+F+ Sbjct: 39 PALEARMLVSHVTGLSRVQLITQDTCGIDDGTRTRLAELATRRLAGEPMAYLLGEREFFG 98 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 ++ PRP+TELLV+ AL RI+ RDV +LDLGTG+G + + + Sbjct: 99 RMFQVTPAVLIPRPDTELLVEQALD----RIDDRDVPAVLDLGTGSGIIAVTIALARRDA 154 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-----FDVIVSNPPYIES 177 + D S AL +A NA G + L DW++++ FD+IVSNPPYI S Sbjct: 155 RVWATDTSADALAVAVRNAQALGAANMHAAL-GDWYAALPESDAPPVFDLIVSNPPYIAS 213 Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237 ++R F+P +L DGL H RTI G L DG +E GY+Q V Sbjct: 214 TDAHLGQGDLR-FEPAGALTDHGDGLRHLRTIVAGAPARLAADGWLLLEHGYDQGPAVRA 272 Query: 238 IFESRKLFLVNAFKDYGGNDRV 259 + V +D G+DR Sbjct: 273 LLADAGFADVFTAQDLAGHDRC 294 >gi|319795451|ref|YP_004157091.1| protein-(glutamine-n5) methyltransferase, release factor-specific [Variovorax paradoxus EPS] gi|315597914|gb|ADU38980.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Variovorax paradoxus EPS] Length = 282 Score = 263 bits (673), Expect = 2e-68, Method: Composition-based stats. Identities = 77/259 (29%), Positives = 112/259 (43%), Gaps = 12/259 (4%) Query: 4 LRDSHSFLCRVTGL---SSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60 D+ L G ++ + D L + R L E + +LG ++F Sbjct: 24 RLDAQLLLLHALGRAPHDRAWLLAHDTDAMSDAAWVALAAQLSRRLTGEPVAYLLGTKEF 83 Query: 61 YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120 + + L + + PRP+TE LVD AL +E R+ R+LDLGTG+GA+ LAL P Sbjct: 84 HGLDLQVDARVLVPRPDTETLVDWALQC----LEDRNAPRVLDLGTGSGAIALALQHARP 139 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180 + VD S AL +A++NA G+ RF W + I SNPPYI + Sbjct: 140 DAQVDAVDASADALAVAEANARRLGLPVRFALAH--WLDGAADGYTAIASNPPYIAANDP 197 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 +P +L G DGL R I HL + G +E G++Q V ++ E Sbjct: 198 HLP---ALRHEPSSALVAGADGLDDIRQIVQNAPDHLAEGGWLLLEHGHDQAAAVRQLLE 254 Query: 241 SRKLFLVNAFKDYGGNDRV 259 R V + D G R Sbjct: 255 YRGFAEVQSRDDLAGIQRC 273 >gi|326318377|ref|YP_004236049.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Acidovorax avenae subsp. avenae ATCC 19860] gi|323375213|gb|ADX47482.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Acidovorax avenae subsp. avenae ATCC 19860] Length = 311 Score = 263 bits (673), Expect = 2e-68, Method: Composition-based stats. Identities = 78/262 (29%), Positives = 113/262 (43%), Gaps = 13/262 (4%) Query: 3 ALRDSHSFLCRVTGLS---SHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRD 59 A D+ L + G ++ L + R E + + G ++ Sbjct: 27 ARIDAQMLLLHLLGRPDAGRAWLLAHDGDRLSTAGQEGFQALCARRQAGEPVAYLTGRKE 86 Query: 60 FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119 FY + L + + +PRP+TE LVD AL P R+ DLGTG+GA+ LAL Sbjct: 87 FYGLPLQVDARVLDPRPDTETLVDWALEVLQPL----PAPRVADLGTGSGAIALALRHGL 142 Query: 120 PFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESV 178 P + V VD S AL +A++NA + D +++ W + G FD +VSNPPYIE Sbjct: 143 PGAQVVLAVDASADALAVARANAQRLHLP--VDFVRTSWLDGISGPFDAVVSNPPYIEED 200 Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238 +PR +L G DGL RTI + L G +E G+NQ V + Sbjct: 201 DPHL---AALVHEPRQALASGPDGLDDIRTIVVQSASRLAPGGWLLLEHGWNQAQAVQAL 257 Query: 239 FESRKLFLVNAFKDYGGNDRVL 260 S V + D G+ R Sbjct: 258 LRSAGYAEVQSRADLAGHARCT 279 >gi|119383646|ref|YP_914702.1| HemK family modification methylase [Paracoccus denitrificans PD1222] gi|119373413|gb|ABL69006.1| [protein release factor]-glutamine N5-methyltransferase [Paracoccus denitrificans PD1222] Length = 275 Score = 263 bits (673), Expect = 2e-68, Method: Composition-based stats. Identities = 98/261 (37%), Positives = 131/261 (50%), Gaps = 10/261 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A D+ L L H + L ++ + + +ILG R F+ Sbjct: 22 AAEDARQLLAHALELPRHHLTAALAMPLPPEALRRFDASLAARAARQPVSQILGRRAFWK 81 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 ++ DT +PRPETE LV++AL +LDLGTGTGA+ ++LL E P Sbjct: 82 HEFRVTRDTLDPRPETETLVEAALT--------EPFASVLDLGTGTGAILISLLAERPAA 133 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182 +G+G DIS ALE+A+ NA GV D L+S+WF+SV G FD+IVSNPPYI + Sbjct: 134 RGLGTDISPAALEVARENATRIGVCA--DFLESNWFASVAGQFDLIVSNPPYIALEEMAG 191 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 L EVR+++PR +L DGLS YR IA G HL G VEIG Q V + + Sbjct: 192 LSPEVREWEPRAALTDEADGLSAYRAIAAGAPAHLLPGGRLMVEIGPTQGAAVAALMRAV 251 Query: 243 KLFLVNAFKDYGGNDRVLLFC 263 L D G DRV+ Sbjct: 252 GLAEPRILPDLDGRDRVVSAR 272 >gi|125717978|ref|YP_001035111.1| HemK protein [Streptococcus sanguinis SK36] gi|125497895|gb|ABN44561.1| HemK protein, putative [Streptococcus sanguinis SK36] gi|324991175|gb|EGC23109.1| protein-(glutamine-N5) methyltransferase [Streptococcus sanguinis SK353] Length = 276 Score = 263 bits (673), Expect = 2e-68, Method: Composition-based stats. Identities = 82/262 (31%), Positives = 127/262 (48%), Gaps = 11/262 (4%) Query: 3 ALRDSHSF--LCRVTG-LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRD 59 A ++ S + R LS ++ + + + R L + L H+ I+G D Sbjct: 17 AGEEAESLSFVYRALNKLSFTDFVLKLRAEVSQKDRDQLKAIQEQLLVHKPAQYIIGSSD 76 Query: 60 FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119 F+ + L + PRPETE LV+ L+ + + +LD+GTG+GA+ LAL Sbjct: 77 FHGLTLKVDERVLIPRPETEELVELILSEN-----PESSLSVLDIGTGSGAIALALANSR 131 Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179 P ++ D+S AL +A NA + + +QSD S++G FD+IVSNPPYI Sbjct: 132 PNWQITASDLSDDALALAAENAQSCEL--NLAFVQSDCLDSIQGKFDIIVSNPPYISEAD 189 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 D +GL V +P ++L DG + YR IA+ +L K G +EIGY Q + + Sbjct: 190 KDEVGLNVLTSEPHMALFAEEDGYAVYRKIAEQAGDYLTKKGKIYLEIGYKQGDGIRELL 249 Query: 240 ESR-KLFLVNAFKDYGGNDRVL 260 E + KD G DR++ Sbjct: 250 EKNFPQKRIRVLKDQFGKDRMV 271 >gi|298243250|ref|ZP_06967057.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Ktedonobacter racemifer DSM 44963] gi|297556304|gb|EFH90168.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Ktedonobacter racemifer DSM 44963] Length = 299 Score = 263 bits (673), Expect = 2e-68, Method: Composition-based stats. Identities = 71/266 (26%), Positives = 128/266 (48%), Gaps = 4/266 (1%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 D+ L + + + P+ L Q I R ++E + ++G ++FY Sbjct: 26 NPRLDAQVLLGHILQVPRATLYAYPERELSVEQEKRFRELIERRARNEPVAYLVGEKEFY 85 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 + + PRPETELLV++AL + R++ ++ + D+GTG+G + + L E P Sbjct: 86 GRDFQVDARVLIPRPETELLVEAALKEARRRLDAGEMPVVADVGTGSGVIPITLALEEPR 145 Query: 122 F-KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180 D+S +ALE+A++N GV ER LQS ++ D++++N PY+ + + Sbjct: 146 LPVIYACDVSAEALEVARTNCQRYGVEERVILLQSYLLQALPQPVDMLLANLPYVGTDEL 205 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH--LNKDGLCSVEIGYNQKVDVVRI 238 + +V +++P ++L G DGL + ++ L G C +E+GY + + R+ Sbjct: 206 PQMAPDVWNYEPHLALFSGPDGLGLLTRLCREARQYGMLRPGGWCVLEMGYLHQEPLTRL 265 Query: 239 FESR-KLFLVNAFKDYGGNDRVLLFC 263 +S V DY G DR L+ Sbjct: 266 VKSLWPKADVACISDYAGLDRHLVVR 291 >gi|194334390|ref|YP_002016250.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Prosthecochloris aestuarii DSM 271] gi|194312208|gb|ACF46603.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Prosthecochloris aestuarii DSM 271] Length = 297 Score = 263 bits (673), Expect = 2e-68, Method: Composition-based stats. Identities = 73/268 (27%), Positives = 121/268 (45%), Gaps = 6/268 (2%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 +A + LC V + Q+ + + + + L+ + + G + FY Sbjct: 28 EARLSAELLLCHVLKANRLQLYLQHSRPVYPDELDAYRALCRKRLQGWPVQYLTGEQYFY 87 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 + PRPETEL+V+ A+ + + ILD+GTG+G + + + P Sbjct: 88 GRVFKVDPRVLIPRPETELVVEHAIERLRGCGGEGSQLSILDIGTGSGCIAVTAALQLPG 147 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS-----VEGLFDVIVSNPPYIE 176 + +D S +AL++A+ NA + GV R LQ+D + E +D+I++NPPYI Sbjct: 148 ARITAIDCSAEALDVARENARSYGVETRIRFLQADMLAPEFLEDDEAAYDLIIANPPYIP 207 Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236 D L EVR+ +PR++L GL YR +A L + G+ E+ V Sbjct: 208 DSEWDDLQAEVREHEPRVALTT-ASGLECYRAVAARAPSLLCQSGILCFELHAEGAGAVS 266 Query: 237 RIFESRKLFLVNAFKDYGGNDRVLLFCR 264 + + + KDYGG DR+L R Sbjct: 267 VLMKENGFGDILLHKDYGGYDRILSAIR 294 >gi|326559213|gb|EGE09644.1| protein methyltransferase HemK [Moraxella catarrhalis 46P47B1] gi|326576387|gb|EGE26296.1| protein methyltransferase HemK [Moraxella catarrhalis O35E] Length = 295 Score = 263 bits (673), Expect = 2e-68, Method: Composition-based stats. Identities = 80/259 (30%), Positives = 130/259 (50%), Gaps = 10/259 (3%) Query: 10 FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69 +L V ++ D D + +T I++ + + + G + F+ +++ Sbjct: 37 WLMHVLDKPFIFLMTDEDYQPTLEESSKITAGIMQLSAGKPLAYLTGQQSFWGRHFLVNA 96 Query: 70 DTFEPRPETELLVDSALAFSLPR-----IEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 T PR +TE+LV+ L ++ + + +++V ILDLGTGTG + + L E F + Sbjct: 97 HTLIPRADTEILVEIILNYAKAQQKIRQTDNKNLVNILDLGTGTGCIGITLALELEFAQV 156 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184 V VDIS +AL++A+ N + ++ R LQS W V G FD+IVSNPPYI+ + Sbjct: 157 VLVDISSEALKVAEQN--NHRLNARCQLLQSHWLQKVSGQFDIIVSNPPYIKENDEHLVN 214 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 +P +L DGL+ R I + +L GL ++E G++Q V ++ S Sbjct: 215 ---LKHEPITALVAAEDGLTDIRHIIETGRAYLKDGGLMAIEHGFDQAEAVRNLYLSSGY 271 Query: 245 FLVNAFKDYGGNDRVLLFC 263 V +DYGGNDRV L Sbjct: 272 LDVYTIQDYGGNDRVTLGR 290 >gi|300115231|ref|YP_003761806.1| release factor-specific protein-(glutamine-N5) methyltransferase [Nitrosococcus watsonii C-113] gi|299541168|gb|ADJ29485.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Nitrosococcus watsonii C-113] Length = 283 Score = 263 bits (673), Expect = 2e-68, Method: Composition-based stats. Identities = 79/261 (30%), Positives = 121/261 (46%), Gaps = 7/261 (2%) Query: 4 LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63 ++ L + + + D L Q + R + E + I GW++F+++ Sbjct: 25 RLEAERLLAYLLKVERSYLYTWSDKRLTPTQWACFQQLLQRRARGEPLAYIRGWQEFWSL 84 Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 L ++ T PRPETE LV+ AL R++ + DLGTG+GA+ LA+ E P + Sbjct: 85 NLQVTEATLIPRPETEQLVELAL----QRLDLERAFNVADLGTGSGAIALAMGSERPRTR 140 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDC 182 + DIS ALE+A+SN G+ + DWF+ + G F +I SNPPYI Sbjct: 141 VIATDISAAALEVARSNGYRLGL-DNVTFRLGDWFAPLAGERFHLIASNPPYIAEGDPH- 198 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 L + F+P I+L GL R IA +L G +E GY+Q ++ +F Sbjct: 199 LTQDGLAFEPDIALIAKDKGLGAMRHIARAAREYLVDGGWLLLEHGYDQGPSLLALFTQL 258 Query: 243 KLFLVNAFKDYGGNDRVLLFC 263 V F D G RV++ Sbjct: 259 GYQQVTDFCDLAGLPRVVIGQ 279 >gi|149006295|ref|ZP_01830007.1| serine hydroxymethyltransferase [Streptococcus pneumoniae SP18-BS74] gi|307127430|ref|YP_003879461.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptococcus pneumoniae 670-6B] gi|147762072|gb|EDK69034.1| serine hydroxymethyltransferase [Streptococcus pneumoniae SP18-BS74] gi|306484492|gb|ADM91361.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptococcus pneumoniae 670-6B] Length = 279 Score = 263 bits (673), Expect = 2e-68, Method: Composition-based stats. Identities = 79/248 (31%), Positives = 119/248 (47%), Gaps = 9/248 (3%) Query: 16 GLSSHQVIVDPDSVLD-DRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEP 74 LS I + + ++ F+ + + H+ I+G DFY + L + P Sbjct: 33 NLSFTDFIFALQQEVTTEEEKQFVEDIYQQLAAHKPAQYIIGQADFYGMHLKVDERVLIP 92 Query: 75 RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134 RPETE LV+ L +L + +LD+GTG+GA+ LAL K P + D+S +AL Sbjct: 93 RPETEELVELILTENLET-----NLSVLDIGTGSGAIALALAKNRPDWSVTAADVSQEAL 147 Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194 E+A NA + +SD F+ + +D+IVSNPPYI +GL V +P + Sbjct: 148 ELASENASDQNL--NIFFKKSDCFAEISEKYDIIVSNPPYISREDESEVGLNVLHSEPHL 205 Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDY 253 +L DGL+ Y IA+ +L G +EIGY Q V +F V KD Sbjct: 206 ALFADEDGLAIYCRIAEDAKDYLKDGGKIYLEIGYKQGQSVPELFRKHLPEKKVRTLKDQ 265 Query: 254 GGNDRVLL 261 G DR+++ Sbjct: 266 FGQDRMVV 273 >gi|295677814|ref|YP_003606338.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Burkholderia sp. CCGE1002] gi|295437657|gb|ADG16827.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Burkholderia sp. CCGE1002] Length = 295 Score = 263 bits (672), Expect = 2e-68, Method: Composition-based stats. Identities = 86/261 (32%), Positives = 127/261 (48%), Gaps = 11/261 (4%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 ++ L V G Q+I + L+ R + E + +++G R+F+ + Sbjct: 30 LEARILLTHVLGWRRTQLITRSEEPLERASVECYRALEARRMAGEPVAQLVGAREFFGLE 89 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 ++ PRPETELLV++ALA IE R R+LDLGTGTGA+ +A+ P Sbjct: 90 FEVTPHVLIPRPETELLVETALA----AIEARPRPRVLDLGTGTGAIAVAIASMRPEAHV 145 Query: 125 VGVDISCKALEIAKSNAVTNGVSER----FDTLQSDWFSSVEG--LFDVIVSNPPYIESV 178 +D S AL +A N ++R L SDW+ S++ FD IVSNPPYI S Sbjct: 146 WALDRSADALAVAARNGARLLDAKRPGGAVTFLHSDWYGSLDTALRFDAIVSNPPYIASG 205 Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238 ++R F+PR +L DGLS R I G L DG+ +E GY+Q V + Sbjct: 206 DPHLAEGDLR-FEPRGALTDEADGLSAIRAIIAGAPERLAADGVLWIEHGYDQAEAVRAL 264 Query: 239 FESRKLFLVNAFKDYGGNDRV 259 +R V + +D G +R+ Sbjct: 265 LGARGFAEVRSERDLAGIERI 285 >gi|229076543|ref|ZP_04209503.1| Protein hemK [Bacillus cereus Rock4-18] gi|228706576|gb|EEL58789.1| Protein hemK [Bacillus cereus Rock4-18] Length = 283 Score = 263 bits (672), Expect = 2e-68, Method: Composition-based stats. Identities = 71/259 (27%), Positives = 117/259 (45%), Gaps = 7/259 (2%) Query: 8 HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67 LC V + ++++ + Q I + ++ I +LG+ FY + Sbjct: 25 ELVLCHVLKTNRTGMLMNMREEITAEQEKSFAEFIHKHVEGIPIQYMLGYEMFYGRSFFV 84 Query: 68 SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 + + PRPETE L+ L R+ + + + D+GTG+GA+ + L E+ V Sbjct: 85 NEEVLIPRPETEELIVGVLERI-ERLFGNEKLHVADIGTGSGAISITLALENKNLHVYTV 143 Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSS---VEGLFDVIVSNPPYIESVIVDCLG 184 DI+ +++E+AK NA + G D S ++ DV+VSNPPYI L Sbjct: 144 DIARESIEVAKENAKSLGAE--VTFYHGDLLSPFYKIDQKLDVVVSNPPYIPEEDWRGLS 201 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-K 243 V++ +P+ +L GG DGL YR + + L K + + EIG Q DV + + Sbjct: 202 PVVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEIGVGQGEDVKELLQQAFP 261 Query: 244 LFLVNAFKDYGGNDRVLLF 262 V D G DR++ Sbjct: 262 HAHVEVVFDINGKDRMVFA 280 >gi|312142773|ref|YP_003994219.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Halanaerobium sp. 'sapolanicus'] gi|311903424|gb|ADQ13865.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Halanaerobium sp. 'sapolanicus'] Length = 286 Score = 263 bits (672), Expect = 2e-68, Method: Composition-based stats. Identities = 73/262 (27%), Positives = 127/262 (48%), Gaps = 8/262 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 + D+ + + + + V D L +++ + + K + I G ++F + Sbjct: 22 SRLDAEVLMAELLDMERINLYVKYDYPLKEKEIKNYREMVKKRAKRIPLAYITGKKEFMS 81 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + LS PRP+TE LV+ +++ R + + +I+D+G G+GA+ ++L Sbjct: 82 LEFDLSEAVLIPRPDTENLVEEVISYC--RENELEKPQIIDVGCGSGAISVSLGYYLEDA 139 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPYIESV 178 + VG DIS AL+IA+ N + ER +QSD D++VSNPPYI Sbjct: 140 RVVGSDISKAALKIARHNLKKFELEERVSVVQSDLLREFIKRDIAEIDIVVSNPPYISEK 199 Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238 + L EV+ +PR +L+ G GL Y+ + + L K+G+ +EIG Q V+ I Sbjct: 200 EMAELAPEVKK-EPRTALEAGKKGLDFYKKLIPQAEKVLKKEGMLFLEIGSRQAEAVLDI 258 Query: 239 FESRKLFLVNAFKDYGGNDRVL 260 F+ + KDY +DR++ Sbjct: 259 FDEN-WSELEIIKDYADHDRIV 279 >gi|283850913|ref|ZP_06368199.1| modification methylase, HemK family [Desulfovibrio sp. FW1012B] gi|283573836|gb|EFC21810.1| modification methylase, HemK family [Desulfovibrio sp. FW1012B] Length = 303 Score = 263 bits (672), Expect = 2e-68, Method: Composition-based stats. Identities = 81/260 (31%), Positives = 124/260 (47%), Gaps = 6/260 (2%) Query: 7 SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66 + L GL +I+ D L + + R + E + +LG R+FY + Sbjct: 47 AQLLLAHSLGLDRLGLILAMDRPLTPDELDAFRPLVARRGRGEPVAYLLGEREFYGLDFR 106 Query: 67 LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126 ++ DT PRPETEL+VD ALA +V DLGTG+G + + L + P G+ Sbjct: 107 VTPDTLIPRPETELIVDRALAL----FPAGNVAAFADLGTGSGCLAVTLASKFPAAVGLA 162 Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDW--FSSVEGLFDVIVSNPPYIESVIVDCLG 184 +D S AL +A+ NA +GV++R +++D+ + +G + ++VSNPPY+ Sbjct: 163 LDRSPNALAVARENAARHGVADRLAFVEADFAALPARDGGYGLVVSNPPYVSQAEYGECS 222 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 EVRDF+P +L G GL +A L G VEIG+ Q + I + Sbjct: 223 REVRDFEPLAALVPGETGLEAVPVVAQAAFDALAPGGWLLVEIGWKQGGEAADILAASGF 282 Query: 245 FLVNAFKDYGGNDRVLLFCR 264 V +D G DRV+ R Sbjct: 283 ADVAVRRDLAGCDRVVEGRR 302 >gi|255065352|ref|ZP_05317207.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Neisseria sicca ATCC 29256] gi|255050177|gb|EET45641.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Neisseria sicca ATCC 29256] Length = 275 Score = 263 bits (672), Expect = 2e-68, Method: Composition-based stats. Identities = 85/266 (31%), Positives = 118/266 (44%), Gaps = 15/266 (5%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 ++ L G S Q++ L + L R LK E + ILG R+FY Sbjct: 13 PRLEARMLLQHAGGYSRVQLVTQGADPLPEAVAAQLDILQARRLKGEPMAYILGGREFYG 72 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + D PRPETE LV++ + ++ DLGTG+GAV + + E Sbjct: 73 RWFEVGPDVLIPRPETEHLVEAVIGHL------PANGQVWDLGTGSGAVAVTVALERKDA 126 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS------SVEGLFDVIVSNPPYIE 176 DIS AL IA+ NA T G R + WF + FDVIVSNPPYIE Sbjct: 127 AVRASDISGGALAIARKNAETLGA--RVEFALGSWFETDKTSSEDKHRFDVIVSNPPYIE 184 Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236 + ++R F+P+ +L DGLS R +A L + G +E GYNQ V Sbjct: 185 AGDEHLSQGDLR-FEPQTALTDFADGLSCIRELAQRAPEFLKEGGWLLLEHGYNQGTAVR 243 Query: 237 RIFESRKLFLVNAFKDYGGNDRVLLF 262 +I + V+ +D G DR+ L Sbjct: 244 QILTANGFAEVSTQQDLAGLDRLTLG 269 >gi|167587637|ref|ZP_02380025.1| modification methylase, HemK family protein [Burkholderia ubonensis Bu] Length = 280 Score = 263 bits (672), Expect = 2e-68, Method: Composition-based stats. Identities = 81/265 (30%), Positives = 123/265 (46%), Gaps = 11/265 (4%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L G + Q+I D LD R E + +++G R+F+ Sbjct: 19 DARVLLAYALGWTRTQLITRGDEPLDAAAVERYLVLEARRAAGEPVAQLVGMREFFGRPF 78 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 ++ D PRPETELLV++AL I+ +LDLGTG+GA+ +++ E P + Sbjct: 79 DVTPDVLIPRPETELLVEAALD----AIDGIPHPAVLDLGTGSGAIAVSIAAERPDARVW 134 Query: 126 GVDISCKALEIAKSNAVTNGVSER----FDTLQSDWFSSVEG--LFDVIVSNPPYIESVI 179 +D S +AL +A+ NA + R LQSDW+++++ FD IVSNPPYI Sbjct: 135 ALDRSGEALAVARRNADKLLDAHRPGGPLHWLQSDWYAALDPALAFDAIVSNPPYIAQYD 194 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 ++R F+PR +L DGL+ R I G L G +E GY+Q V + Sbjct: 195 PHLSQGDLR-FEPRGALTDDADGLAAIRAIVAGAGARLKPGGTLWIEHGYDQAEAVRALL 253 Query: 240 ESRKLFLVNAFKDYGGNDRVLLFCR 264 + V + D +R R Sbjct: 254 AAHGFVSVESLADLAAIERTTGGRR 278 >gi|300690279|ref|YP_003751274.1| N5-glutamine methyltransferase, modifies release factors RF-1 and RF-2 [Ralstonia solanacearum PSI07] gi|299077339|emb|CBJ49964.1| N5-glutamine methyltransferase, modifies release factors RF-1 and RF-2 [Ralstonia solanacearum PSI07] Length = 295 Score = 263 bits (672), Expect = 3e-68, Method: Composition-based stats. Identities = 85/264 (32%), Positives = 122/264 (46%), Gaps = 11/264 (4%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 ++ + VTGLS Q+I +DD R L R L E + +LG R+F+ Sbjct: 31 EARMLVSHVTGLSRVQLITQDTCSIDDGARARLAELATRRLAGEPMAYLLGEREFFGRMF 90 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 ++ PRP+TELLV+ AL RI+ RD +LDLGTG+G + + + + Sbjct: 91 RVTPAVLIPRPDTELLVEQALD----RIDDRDAPDVLDLGTGSGIIAVTIALARRDARVW 146 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-----LFDVIVSNPPYIESVIV 180 D S AL +A NA G + DW++++ +FD+I SNPPYI S Sbjct: 147 ATDTSADALTVAVRNAQALGAA-NVHVALGDWYAALPENDAPPVFDLIASNPPYIASTDT 205 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 ++R F+P +L DGL H RTI G L DG +E GY+Q V + Sbjct: 206 HLDQGDLR-FEPAGALTDHGDGLRHLRTIVTGAPARLAADGWLLLEHGYDQGPAVRALLA 264 Query: 241 SRKLFLVNAFKDYGGNDRVLLFCR 264 V +D G+DR R Sbjct: 265 EAGFADVFTAQDLAGHDRCSGGRR 288 >gi|76786890|ref|YP_329783.1| HemK family modification methylase [Streptococcus agalactiae A909] gi|77408686|ref|ZP_00785419.1| modification methylase, HemK family [Streptococcus agalactiae COH1] gi|76561947|gb|ABA44531.1| modification methylase, HemK family [Streptococcus agalactiae A909] gi|77172734|gb|EAO75870.1| modification methylase, HemK family [Streptococcus agalactiae COH1] Length = 276 Score = 263 bits (672), Expect = 3e-68, Method: Composition-based stats. Identities = 80/253 (31%), Positives = 124/253 (49%), Gaps = 8/253 (3%) Query: 11 LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70 L + S+ +++ +S + D + + N + KH S I G F ++ + Sbjct: 28 LKDLKQWSTTDYLLNQNSSVSDTDQQLMENIFQQLKKHRSPQYITGKAYFRDLIFFVDER 87 Query: 71 TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130 PRPETE LVD L+ + K + +LD+GTG+GA+ ++L KE P + + DIS Sbjct: 88 VLIPRPETEELVDLILSEN-----KVEDCSVLDIGTGSGAIAISLKKERPSWDVLASDIS 142 Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDF 190 AL++AK NA N ++SD FS++ FD+IVSNPPYI D +G V Sbjct: 143 VSALDLAKENA--NNCDAEVTFIESDVFSNISDKFDIIVSNPPYISYNDKDEVGKNVLAS 200 Query: 191 DPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNA 249 +P +L +GL+ YR I + +L G EIGY Q D+ + + Sbjct: 201 EPHSALFADEEGLAIYRKIIENSREYLQPRGKLYFEIGYKQGDDLRSLLKRYFPNNRCRV 260 Query: 250 FKDYGGNDRVLLF 262 KD G DR+++ Sbjct: 261 LKDIFGKDRMVVL 273 >gi|229033961|ref|ZP_04188915.1| Protein hemK [Bacillus cereus AH1271] gi|228728387|gb|EEL79409.1| Protein hemK [Bacillus cereus AH1271] Length = 283 Score = 262 bits (671), Expect = 3e-68, Method: Composition-based stats. Identities = 71/259 (27%), Positives = 114/259 (44%), Gaps = 7/259 (2%) Query: 8 HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67 LC V + ++++ + Q T I + ++ I ++G+ FY + Sbjct: 25 EIVLCHVLKTNRTGMLMNMREEITVEQETSFTEFIHKHVEGIPIQYMIGYEMFYGRSFFV 84 Query: 68 SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 + + PRPETE L+ L + + + D+GTG+GA+ + L E+ V Sbjct: 85 NEEVLIPRPETEELIVGVLERIERHF-GDEKLHVADIGTGSGAISITLALENKNLHVYTV 143 Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG---LFDVIVSNPPYIESVIVDCLG 184 DI+ +++E+AK NA T G D S DV+VSNPPYI L Sbjct: 144 DIAQESIEVAKENAKTLGAE--VTFYHGDLLSPFHKTGQKLDVVVSNPPYIPEEDWRGLS 201 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-K 243 V++ +P+ +L GG DGL YR + + L K + + EIG Q DV + + Sbjct: 202 PVVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEIGVGQGEDVKELLQQAFP 261 Query: 244 LFLVNAFKDYGGNDRVLLF 262 V D G DR++ Sbjct: 262 HAHVEVVFDINGKDRMVFA 280 >gi|229118824|ref|ZP_04248173.1| Protein hemK [Bacillus cereus Rock1-3] gi|228664625|gb|EEL20118.1| Protein hemK [Bacillus cereus Rock1-3] Length = 283 Score = 262 bits (671), Expect = 3e-68, Method: Composition-based stats. Identities = 70/259 (27%), Positives = 115/259 (44%), Gaps = 7/259 (2%) Query: 8 HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67 LC V + ++++ + Q I + ++ I +LG+ FY + Sbjct: 25 ELVLCHVLKTNRTGMLMNMREEITAEQEKSFAEFIHKHVEGIPIQYMLGYEMFYGRSFFV 84 Query: 68 SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 + + PRPETE L+ L + + + D+GTG+GA+ + L E+ V Sbjct: 85 NEEVLIPRPETEELIVGVLERIERHF-GNEKLHVADIGTGSGAISITLALENKNLHVYTV 143 Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSS---VEGLFDVIVSNPPYIESVIVDCLG 184 DI+ +++E+AK NA + G D S ++ DV+VSNPPYI L Sbjct: 144 DIARESIEVAKENAKSLGAE--VTFYHGDLLSPFYKIDQKLDVVVSNPPYIPEEDWRGLS 201 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-K 243 V++ +P+ +L GG DGL YR + + L K + + EIG Q DV + + Sbjct: 202 PVVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEIGVGQGEDVKELLQQAFP 261 Query: 244 LFLVNAFKDYGGNDRVLLF 262 V D G DR++ Sbjct: 262 HAHVEVVFDINGKDRMVFA 280 >gi|194290878|ref|YP_002006785.1| n5-glutamine methyltransferase, modifies release factors rf-1 and rf-2 [Cupriavidus taiwanensis LMG 19424] gi|193224713|emb|CAQ70724.1| N5-glutamine methyltransferase, modifies release factors RF-1 and RF-2 [Cupriavidus taiwanensis LMG 19424] Length = 298 Score = 262 bits (671), Expect = 3e-68, Method: Composition-based stats. Identities = 82/260 (31%), Positives = 124/260 (47%), Gaps = 8/260 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 ++ L VTGLS Q+I VL QR L + R L E + ++G R+F+ Sbjct: 29 PALEARMLLTHVTGLSRTQLITRDTDVLTIAQRDALATLLARRLAGEPMAYLIGEREFFG 88 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + ++ D PRP+T + A +L R+ +LDLGTG+G + + L +E Sbjct: 89 RKFRVTPDVLIPRPDT----EVAAEAALARLAPVPHPNVLDLGTGSGILAVTLARERRDA 144 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIV 180 + DIS AL +A+ NA G +E + L SDW+S++ F +IVSNPPYI + Sbjct: 145 RVWATDISPGALMVAQDNARALG-AEHIEFLVSDWYSALPPDLRFHLIVSNPPYIAAGDP 203 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 ++R F+P +L DGLS R I G L G +E GY+Q ++ E Sbjct: 204 HLAEGDLR-FEPIDALTDHDDGLSDLRAIVSGAGMRLLPGGWLLMEHGYDQAAATRQLLE 262 Query: 241 SRKLFLVNAFKDYGGNDRVL 260 + V +D G +R Sbjct: 263 ASGFADVFTARDLAGLERCT 282 >gi|225856676|ref|YP_002738187.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptococcus pneumoniae P1031] gi|225724378|gb|ACO20230.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptococcus pneumoniae P1031] Length = 279 Score = 262 bits (671), Expect = 3e-68, Method: Composition-based stats. Identities = 79/248 (31%), Positives = 119/248 (47%), Gaps = 9/248 (3%) Query: 16 GLSSHQVIVDPDSVLD-DRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEP 74 LS I + + ++ F+ + + H+ I+G DFY + L + P Sbjct: 33 NLSFTDFIFALQQEVTTEEEKQFVEDIYQQLAAHKPAQYIIGQADFYGMHLKVDERVLIP 92 Query: 75 RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134 RPETE LV+ L +L + +LD+GTG+GA+ LAL K P + D+S +AL Sbjct: 93 RPETEELVELILTENLET-----NLSVLDIGTGSGAIALALAKNRPDWSVTAADVSQEAL 147 Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194 E+A NA + +SD F+ + +D+IVSNPPYI +GL V +P + Sbjct: 148 ELASENASDQNL--NIFFKKSDCFAEISEKYDIIVSNPPYISREDESEVGLNVLHSEPHL 205 Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDY 253 +L DGL+ Y IA+ +L G +EIGY Q V +F V KD Sbjct: 206 ALFADEDGLAIYCRIAEDAKDYLKDGGKIYLEIGYKQGQSVPELFRKHLPEKRVRTLKDQ 265 Query: 254 GGNDRVLL 261 G DR+++ Sbjct: 266 FGQDRMVV 273 >gi|15838113|ref|NP_298801.1| protoporphyrinogen oxidase [Xylella fastidiosa 9a5c] gi|18203344|sp|Q9PD67|HEMK_XYLFA RecName: Full=Protein methyltransferase hemK homolog; AltName: Full=M.XfaHemK2P gi|9106546|gb|AAF84321.1|AE003981_3 protoporphyrinogen oxidase [Xylella fastidiosa 9a5c] Length = 275 Score = 262 bits (671), Expect = 3e-68, Method: Composition-based stats. Identities = 75/259 (28%), Positives = 120/259 (46%), Gaps = 7/259 (2%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ + L + D L + + + + ++G R F+ + + Sbjct: 19 DAEALLLHALDCDRAWLFTHGDIPLAAAATESFQALVEQRARGIPVAYLIGRRGFWTLDV 78 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 +SS T PR ETE LV+ AL R++ R+ DLGTG+GA+ LA+ E P + + Sbjct: 79 MVSSATLIPRAETETLVEQAL----QRLDHASERRVADLGTGSGAIALAIACERPQAQVL 134 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLG 184 D S AL+IA NA +G++ + DW+ ++ G FD+IVSNPPYI Sbjct: 135 ATDNSAAALDIAARNASAHGLNH-VVFREGDWYEALLGERFDLIVSNPPYIAVTDPHLTQ 193 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 ++R F+P +L G DGL R + G +L G +E G++Q + + + L Sbjct: 194 GDLR-FEPPSALISGGDGLDALRILTAGAPAYLRPGGWLVMEHGWDQGAAMRTLLHTAGL 252 Query: 245 FLVNAFKDYGGNDRVLLFC 263 V +D DRV + Sbjct: 253 VAVATVQDLEARDRVTVGR 271 >gi|170728013|ref|YP_001762039.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Shewanella woodyi ATCC 51908] gi|169813360|gb|ACA87944.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Shewanella woodyi ATCC 51908] Length = 280 Score = 262 bits (671), Expect = 3e-68, Method: Composition-based stats. Identities = 80/262 (30%), Positives = 125/262 (47%), Gaps = 8/262 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 D+ L + + PD L Q T + R + I I+G R+F++ Sbjct: 23 PKLDAEVMLLHIIHKQRGYLYTWPDERLTSEQIDDYTKMVGRRVIGTPIAHIVGEREFWS 82 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + ++ T PRP+TE+LV++AL + + ++LDLGTGTGA+ L+L E P + Sbjct: 83 LPFMVNPTTLIPRPDTEILVETAL-----NLPLAEAAKVLDLGTGTGAIALSLAYEKPSW 137 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181 + VD +A+ +AK+N + + D +QSDWF SV F++IVSNPPYI+ Sbjct: 138 QITAVDKIIEAVALAKANRSHLKLP-QVDIIQSDWFDSVNCYDFNLIVSNPPYIDEEDSH 196 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P +L G + IAD +L G +E G+ Q + + Sbjct: 197 LEEGDVR-FEPHSALTAPEHGFADLYHIADCARDYLAPGGYLLLEHGFGQALQLRDKMIE 255 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 V +D+G NDR L Sbjct: 256 LGYENVATVRDFGSNDRCTLGR 277 >gi|294787799|ref|ZP_06753043.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Simonsiella muelleri ATCC 29453] gi|294484092|gb|EFG31775.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Simonsiella muelleri ATCC 29453] Length = 276 Score = 262 bits (671), Expect = 3e-68, Method: Composition-based stats. Identities = 77/267 (28%), Positives = 124/267 (46%), Gaps = 15/267 (5%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 +S L +TG + Q+I +L ++Q L R + E + +LG R+FY Sbjct: 15 PRNESRMLLQHITGYTRAQLITHDQEILTEQQINQLNTLAKRREQGEPMAYLLGTREFYG 74 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 T+S PRPETE L+++AL + + + DLGTG+G + ++ E Sbjct: 75 REFTVSPAVLIPRPETEHLLEAAL------LRLPENGVLWDLGTGSGILGISTKLERKDS 128 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS------VEGLFDVIVSNPPYIE 176 D+S AL++A+ NA G Q WF + E DV+VSNPPYI+ Sbjct: 129 LVFASDLSADALQVAQQNAQHLGAD--VAFAQGSWFDAARVFRLPENSVDVLVSNPPYIK 186 Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236 + + ++R F+P+ +L DGL+H R + +L +G +E GYNQ V + Sbjct: 187 NNDLHLNQGDLR-FEPQTALTDFSDGLAHIRILIKNGKIYLKPNGWLLLEHGYNQAVAIR 245 Query: 237 RIFESRKLFLVNAFKDYGGNDRVLLFC 263 ++F ++ D G DR+ Sbjct: 246 QLFTQHGYQMIETQPDLAGLDRITFGQ 272 >gi|148653569|ref|YP_001280662.1| HemK family modification methylase [Psychrobacter sp. PRwf-1] gi|148572653|gb|ABQ94712.1| modification methylase, HemK family [Psychrobacter sp. PRwf-1] Length = 314 Score = 262 bits (671), Expect = 3e-68, Method: Composition-based stats. Identities = 82/289 (28%), Positives = 130/289 (44%), Gaps = 38/289 (13%) Query: 7 SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66 + L V + +I D + L D ++ + I + + + G + F+++ Sbjct: 26 ADWLL-YVLQKPASFLITDAEYKLTDAEQAHFESGIEQMRSGTPLAYLTGKQAFWSLDFF 84 Query: 67 LSSDTFEPRPETELLVDSALAFSLPRIE----------------KRDVVRILDLGTGTGA 110 ++ T PRP+TE+LV+ LA+ + R+LDLGTG+G Sbjct: 85 VNEHTLIPRPDTEVLVEQVLAWIDTHYAQVQNDDADDINDFNDANKLPKRLLDLGTGSGC 144 Query: 111 VCLALLKES---------PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 + ++L E ++ +D S ALE+A+ NA N V+ + +QSDWFS++ Sbjct: 145 IAISLAHELQMLAPNHTASQWQVTAIDYSNPALEVARRNAALNKVT-NIEFIQSDWFSAL 203 Query: 162 EG--------LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213 E FD+IVSNPPYI + +P +L +GL + IA Sbjct: 204 EAANTNKESPRFDIIVSNPPYIVDDDEHL---DKLKAEPLSALVAPDNGLGDIKQIAGQA 260 Query: 214 SRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262 +L GL +VE GY+Q V +IF V +DYGGNDRV + Sbjct: 261 RGYLVSGGLLAVEHGYDQGAAVRQIFTDFGYTQVKTVQDYGGNDRVTMG 309 >gi|241667854|ref|ZP_04755432.1| HemK family modification methylase [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254876396|ref|ZP_05249106.1| modification methylase [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254842417|gb|EET20831.1| modification methylase [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 285 Score = 262 bits (671), Expect = 3e-68, Method: Composition-based stats. Identities = 83/261 (31%), Positives = 132/261 (50%), Gaps = 6/261 (2%) Query: 4 LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63 D +C V + + ++ D LD+ + I+R L E + ILG++ F+N Sbjct: 25 KHDLQMIICDVLSVDKTYLYLNSDKQLDNAILTKINGKILRLLAGEPLAYILGYKYFWNQ 84 Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 +L ++ DT PR +TE++V + L +K ++ILDLG G+GA+ LAL E P + Sbjct: 85 KLYVTKDTLIPRADTEVIVAAVLDDIQ---DKNAQLKILDLGAGSGAIALALADELPRSQ 141 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDC 182 V VD+ K L++AK NA+ N + + +QS W+ +++G FD+IVSNPPYI+ V Sbjct: 142 VVAVDLYSKTLDVAKKNALANKI-VNVEFMQSSWYENLDGTKFDIIVSNPPYID-VDDAN 199 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 + VR+ +P +L +GL+ R I L + G +E G+ Q D+ IF Sbjct: 200 IDDSVREHEPSRALFAADNGLADIRIIISQAGGFLKQGGYLYIEHGFTQANDIANIFSQY 259 Query: 243 KLFLVNAFKDYGGNDRVLLFC 263 + KD DR Sbjct: 260 SFGDIQTIKDLNYKDRCTKAR 280 >gi|238927405|ref|ZP_04659165.1| polypeptide chain release factor methyltransferase HemK [Selenomonas flueggei ATCC 43531] gi|238884687|gb|EEQ48325.1| polypeptide chain release factor methyltransferase HemK [Selenomonas flueggei ATCC 43531] Length = 292 Score = 262 bits (671), Expect = 3e-68, Method: Composition-based stats. Identities = 81/264 (30%), Positives = 129/264 (48%), Gaps = 5/264 (1%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 D+ L + V D L+ + + +H I ILG R+F Sbjct: 27 PRLDAEVLLAEALHRDRMYLYVHFDEPLEPAELAAFRGYVKERGRHVPIAYILGRREFMG 86 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR-DVVRILDLGTGTGAVCLALLKESPF 121 + ++ DT PRP+TE+L A+ R + +R D+GTGTGA+ L++L + Sbjct: 87 LPFRVTRDTLIPRPDTEILAQFAVDTLRARASAGMEELRFADIGTGTGAIALSVLNYTEG 146 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIV 180 + VDIS +A + NA+ G+ R + L D + G +D+I+SNPPYI + V Sbjct: 147 TRADAVDISPEAAAVTAENAMALGLMSRIEILIGDLAVPLLGRSYDMILSNPPYIPTAEV 206 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 D L EVR +P ++LDGG DGLS YR + L + G+ +VE+G ++ DV + Sbjct: 207 DTLMEEVRSHEPHLALDGGADGLSVYRQLMADAPDLLKEGGIIAVEVGIHEAADVASLMA 266 Query: 241 SRKLFLVNA--FKDYGGNDRVLLF 262 + +V +D G +RV++ Sbjct: 267 AHP-RIVRTAMRRDLAGIERVVIG 289 >gi|322387785|ref|ZP_08061394.1| protein-(glutamine-N5) methyltransferase [Streptococcus infantis ATCC 700779] gi|321141652|gb|EFX37148.1| protein-(glutamine-N5) methyltransferase [Streptococcus infantis ATCC 700779] Length = 278 Score = 262 bits (671), Expect = 3e-68, Method: Composition-based stats. Identities = 81/248 (32%), Positives = 126/248 (50%), Gaps = 8/248 (3%) Query: 16 GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75 LS + + ++ F+ + H I+G +F+ ++L + PR Sbjct: 33 NLSFTDFVFTLQQEATEEEKQFVEEIYKKLAAHIPAQYIIGHAEFFGMQLKVDERVLIPR 92 Query: 76 PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135 ETE LV+ LA +L +D +++LD+GTG+GA+ LAL K P + DIS +AL+ Sbjct: 93 LETEELVELILAENL-----KDNLKVLDIGTGSGAIALALAKNRPDWSVTAADISQEALD 147 Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195 ++ NA N + ++SD FS + +D+IVSNPPYI +GL V +P ++ Sbjct: 148 LSLENA--NAQNLNLSFIKSDCFSEISAKYDIIVSNPPYISRADEVEVGLNVLHSEPHLA 205 Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF-ESRKLFLVNAFKDYG 254 L DGL+ YR IA+ +LN G +EIGY Q V +F E+ V KD Sbjct: 206 LFADEDGLAIYRRIAEDSKDYLNDGGKIYLEIGYKQGQSVPALFMENFPEKRVRTLKDQF 265 Query: 255 GNDRVLLF 262 G DR+++ Sbjct: 266 GQDRMVVI 273 >gi|289167969|ref|YP_003446238.1| protoporphyrinogen oxidase [Streptococcus mitis B6] gi|288907536|emb|CBJ22373.1| protoporphyrinogen oxidase [Streptococcus mitis B6] Length = 278 Score = 262 bits (671), Expect = 3e-68, Method: Composition-based stats. Identities = 77/247 (31%), Positives = 117/247 (47%), Gaps = 8/247 (3%) Query: 16 GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75 LS + + + F+ + H+ I+G DFY ++L + PR Sbjct: 33 NLSFTDFVFALQQEVTKEEEVFVKGIFQQLAAHKPAQYIIGQTDFYGMQLKVDERVLIPR 92 Query: 76 PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135 PETE LV+ LA + + +++LD+GTG+GA+ L L K + DIS +AL+ Sbjct: 93 PETEELVELILAEN-----SEESLKVLDIGTGSGAIALVLAKNRAAWSVTAADISQEALD 147 Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195 +A NA +SD F+ + +D+IVSNPPYI +GL V +P ++ Sbjct: 148 LASENAK--NQKFNIFFKKSDCFAEIFEKYDIIVSNPPYISREDESEVGLNVLHSEPHLA 205 Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDYG 254 L DGL+ YR IA+ +L G +EIGY Q V +F V KD Sbjct: 206 LFADEDGLAIYRRIAEDAKDYLKDGGKIYLEIGYKQGQSVPELFRKHLPEKRVRTLKDQF 265 Query: 255 GNDRVLL 261 G DR+++ Sbjct: 266 GQDRMVV 272 >gi|259418842|ref|ZP_05742759.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Silicibacter sp. TrichCH4B] gi|259345064|gb|EEW56918.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Silicibacter sp. TrichCH4B] Length = 278 Score = 262 bits (671), Expect = 3e-68, Method: Composition-based stats. Identities = 97/262 (37%), Positives = 134/262 (51%), Gaps = 8/262 (3%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 RD+ L + + +V + L I + ++G RDFY Sbjct: 23 DPARDARVLLAHAARIEAARVTLIAPEELSHEVAERYDQLISLRAIRVPVSHLIGERDFY 82 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 R +S+D +PRPETE L+++AL+ R+LDLG G+G + + LL E Sbjct: 83 GRRFKVSADVLDPRPETETLIEAALS--------EPFERVLDLGVGSGCILVTLLAEQQG 134 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181 G+GVD+S A A +NAV + V R D QSDWFS+V+G FD+IVSNPPYI +D Sbjct: 135 ALGLGVDLSEAACLQACANAVLHRVEARADIRQSDWFSAVKGQFDLIVSNPPYIALNEMD 194 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 L EVR+ +P+++L G DGLS YR I G+ HL + G VEIG Q V + + Sbjct: 195 DLSEEVREHEPQMALTDGADGLSAYRLICAGLGCHLAQGGRVLVEIGPTQGAAVAEMMRA 254 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 L V D G DRV+L Sbjct: 255 AGLVEVTVLPDLDGRDRVVLGR 276 >gi|307296978|ref|ZP_07576794.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Sphingobium chlorophenolicum L-1] gi|306877504|gb|EFN08732.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Sphingobium chlorophenolicum L-1] Length = 289 Score = 262 bits (671), Expect = 3e-68, Method: Composition-based stats. Identities = 89/261 (34%), Positives = 133/261 (50%), Gaps = 11/261 (4%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 D+ L + + +++ D + R L E I I G RDF+ Sbjct: 35 PRLDAELLLAHALRIDRNDLLLRQR---DLSIPPDFDALLQRRLTGEPIAYITGTRDFWT 91 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L ++ D PRP++E L+++AL R RILDLGTG+GA+ LA L + P Sbjct: 92 ISLHVTPDVLIPRPDSETLIEAALD----HFGARSPARILDLGTGSGALLLAALSQWPQA 147 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182 +G GVDIS AL +A+ NA G ER +W +EG FD+I+ NPPYI + Sbjct: 148 RGTGVDISPAALAVAQDNADRLGFGERAAFRLGNWAEGIEGPFDLILINPPYIARDV--A 205 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 L +V +P +L G DGL YR IA + R L DG+ ++EIGY+Q++ V + + Sbjct: 206 LAGDVL-HEPESALFAGADGLDDYRRIAPTLPRLLAPDGMAAIEIGYDQRLSVSALLADQ 264 Query: 243 KLFLVNAFKDYGGNDRVLLFC 263 L V + +D G++R L+ Sbjct: 265 GLS-VASRRDLAGHERCLMAT 284 >gi|300313562|ref|YP_003777654.1| polypeptide chain release factors methylase [Herbaspirillum seropedicae SmR1] gi|300076347|gb|ADJ65746.1| polypeptide chain release factors methylase protein [Herbaspirillum seropedicae SmR1] Length = 277 Score = 262 bits (671), Expect = 3e-68, Method: Composition-based stats. Identities = 87/257 (33%), Positives = 130/257 (50%), Gaps = 11/257 (4%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 ++ LC L+ Q+I + L + L + R L+ E I I+G R+FY + Sbjct: 24 LENRILLCHALRLTRVQLITQSERQLSAAEAETLAALLARRLRGEPIAYIVGQREFYGLD 83 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L +S D PRP+TELLV+ AL LD+GTG+GA+ +A+ P + Sbjct: 84 LRVSPDVLIPRPDTELLVELALERL------PQGGSALDMGTGSGAIAVAIAHTRPDAQV 137 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVDC 182 +D S AL IA+ NA T+ R L+SDW+ ++ + FD+IVSNPPYI + + Sbjct: 138 TALDASPAALAIARENASTH--QVRVRLLESDWYGALDADQAFDLIVSNPPYIVAGDIHL 195 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 ++R F+P +L DGLS RTI +G HL G +E GY+Q V + Sbjct: 196 SQGDLR-FEPVDALTDHADGLSDLRTIIEGAPAHLKAGGWLLMEHGYDQAAAVRALLTGG 254 Query: 243 KLFLVNAFKDYGGNDRV 259 V +++D G +RV Sbjct: 255 GWREVQSWRDLAGIERV 271 >gi|194398713|ref|YP_002037656.1| methyltransferase, HemK family protein [Streptococcus pneumoniae G54] gi|194358380|gb|ACF56828.1| methyltransferase, HemK family protein [Streptococcus pneumoniae G54] Length = 279 Score = 262 bits (671), Expect = 3e-68, Method: Composition-based stats. Identities = 79/248 (31%), Positives = 120/248 (48%), Gaps = 9/248 (3%) Query: 16 GLSSHQVIVDPDSVLD-DRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEP 74 LS I + + ++ F+ + + H+ I+G DFY + L + P Sbjct: 33 NLSFTDFIFALQQEVTTEEEKQFVEDIYQQLAAHKPAQYIIGQADFYGMHLKVDERVLIP 92 Query: 75 RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134 RPETE LV+ L +L + +LD+GTG+GA+ LAL K P + D+S +AL Sbjct: 93 RPETEELVELILTENLET-----NLSVLDIGTGSGAIALALAKNRPDWSVTAADVSQEAL 147 Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194 E+A NA + + +SD F+ + +D+IVSNPPYI +GL V +P + Sbjct: 148 ELASENA--SDQNFNIFFKKSDCFAEISEKYDIIVSNPPYISREDESEVGLNVLHSEPHL 205 Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDY 253 +L DGL+ Y IA+ +L G +EIGY Q V +F V KD Sbjct: 206 ALFADEDGLAIYCRIAEDAKDYLKDGGKIYLEIGYKQGQSVPELFRKHLPEKRVRTLKDQ 265 Query: 254 GGNDRVLL 261 G DR+++ Sbjct: 266 FGQDRMVV 273 >gi|257064122|ref|YP_003143794.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Slackia heliotrinireducens DSM 20476] gi|256791775|gb|ACV22445.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Slackia heliotrinireducens DSM 20476] Length = 314 Score = 262 bits (671), Expect = 3e-68, Method: Composition-based stats. Identities = 79/283 (27%), Positives = 127/283 (44%), Gaps = 27/283 (9%) Query: 7 SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66 + + TGLS ++ + + L +R L +A+ R E + I G F + + Sbjct: 30 AQWLMSHATGLSRVEIYTNYERPLSTEERDVLRDALRRRGSGEPLQYIQGSAPFRFIEVK 89 Query: 67 LSSDTFEPRPETELLVDSALAFSLPRIE-------------------------KRDVVRI 101 + PRPETE+LVD A+ + K + Sbjct: 90 VRPGVLIPRPETEVLVDEAMRELKSIMPDAFTHRTARDSMSVDGEEPVPAEAFKIPTFNV 149 Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 +D TG+G + A+ E + V D+S A+E+A+ NA G+ +R + D + Sbjct: 150 VDACTGSGCIACAIASEHANAQVVATDVSETAVELARENAADLGLGDRIEVRLCDLLADA 209 Query: 162 EGLF-DVIVSNPPYIESVIVD-CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 E + D+IVSNPPY+ + +VD + EV DF+PR++LDGG DGL YR + R L Sbjct: 210 EDSWADLIVSNPPYVPTAVVDSEIPAEVADFEPRLALDGGEDGLDIYRRLLADGKRVLKA 269 Query: 220 DGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262 DG+ + E+ + R+ E V KD G R+++ Sbjct: 270 DGILACELHETCLEEAARLAEEAHYTQVRIAKDLAGRPRIIVA 312 >gi|228988554|ref|ZP_04148641.1| Protein hemK [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228771171|gb|EEM19650.1| Protein hemK [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 283 Score = 262 bits (670), Expect = 4e-68, Method: Composition-based stats. Identities = 71/259 (27%), Positives = 112/259 (43%), Gaps = 7/259 (2%) Query: 8 HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67 LC V + ++++ + Q I + ++ I ++G FY + Sbjct: 25 EIVLCHVLKTNRTGLLMNMREEITAEQEKSFAEFIHKHVEGIPIQYMIGHEMFYGRSFFV 84 Query: 68 SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 + + PRPETE L+ L + + + D+GTG+GA+ + L E+ V Sbjct: 85 NEEVLIPRPETEELIVGVLERIERHF-GDEKLHVADIGTGSGAISITLALENKNLHVYTV 143 Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIVDCLG 184 DI+ +++E+AK NA T G D S DV+VSNPPYI L Sbjct: 144 DIAQESIEVAKENAKTLGAE--VTFYHGDLLSPFYETSQKLDVVVSNPPYIPEEDWRGLS 201 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-K 243 V++ +P+ +L GG DGL YR D + L K + + EIG Q DV + + Sbjct: 202 PVVKEHEPKRALVGGEDGLDFYRRFMDELPNVLQKKAIVAFEIGVGQGEDVKGLLQQAFP 261 Query: 244 LFLVNAFKDYGGNDRVLLF 262 V D G DR++ Sbjct: 262 HAHVEVVFDINGKDRMVFA 280 >gi|289423625|ref|ZP_06425425.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Peptostreptococcus anaerobius 653-L] gi|289155993|gb|EFD04658.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Peptostreptococcus anaerobius 653-L] Length = 302 Score = 262 bits (670), Expect = 4e-68, Method: Composition-based stats. Identities = 69/266 (25%), Positives = 132/266 (49%), Gaps = 8/266 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 D LC+V ++++ D + + + + + I I+ ++F Sbjct: 29 PRLDVDLMLCKVMDFDRMKLMMSYDKPMHPEEIKEFERMLEQRSMRKPIAYIINEKEFMG 88 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFS--LPRIEKRDVVRILDLGTGTGAVCLALLKESP 120 + ++ + PRP+TE++V+ L P+ + ++I+D+ G+GA+ L++ K S Sbjct: 89 LNFYVNENVLIPRPDTEIIVEEVLDIIDRAPKEGENGPIKIMDMCLGSGAIALSIAKLSS 148 Query: 121 -FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-----GLFDVIVSNPPY 174 + GVDIS +A+++A+ N G+ D ++SD FSS + D++VSNPPY Sbjct: 149 VDLQICGVDISKEAIDVARVNRRRLGLGACVDFVESDLFSSSDLEVYLDSLDILVSNPPY 208 Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234 IE +++ L +V+D++P ++L GG DG+ Y++I + L G E G++Q Sbjct: 209 IEDHVIEGLEPDVKDYEPILALAGGDDGMDFYKSIIKSSPKFLKIGGWLVFESGHDQAEK 268 Query: 235 VVRIFESRKLFLVNAFKDYGGNDRVL 260 + E + KD G +R++ Sbjct: 269 IKNEMEKVGFDCLYFKKDLQGYNRMV 294 >gi|152977514|ref|YP_001377031.1| HemK family modification methylase [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152026266|gb|ABS24036.1| modification methylase, HemK family [Bacillus cytotoxicus NVH 391-98] Length = 283 Score = 262 bits (670), Expect = 4e-68, Method: Composition-based stats. Identities = 70/259 (27%), Positives = 115/259 (44%), Gaps = 7/259 (2%) Query: 8 HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67 LC V + ++++ + + Q I + + + ++G+ FY + Sbjct: 25 EIVLCHVLNTNRTGLMMNMREEISNEQEKRFKELIHKHIDGMPVQYLMGYEMFYGRSFFV 84 Query: 68 SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 + + PRPETE L+ L ++ + + D+GTG+GA+ + L E+ V Sbjct: 85 NEEVLIPRPETEELIVGVLERIQRNFGNQE-LHVADIGTGSGAISITLALENQNLHVYTV 143 Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVIVDCLG 184 DI+ +++E+AK NA + G D S DV+VSNPPYI L Sbjct: 144 DIAQESIEVAKQNATSLGA--NVTFYHGDLLSPFYETGKKLDVVVSNPPYIPEEDWKGLS 201 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-K 243 V++ +P+ +L GG DGL YR + + R L K L + E+G Q DV + E Sbjct: 202 SVVKEHEPKRALVGGADGLDFYRRFMEELPRVLQKKALVAFEVGVGQGEDVKGLLEDTFP 261 Query: 244 LFLVNAFKDYGGNDRVLLF 262 V D G DR++ Sbjct: 262 HAHVEVVFDINGKDRMVFA 280 >gi|221195021|ref|ZP_03568077.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Atopobium rimae ATCC 49626] gi|221184924|gb|EEE17315.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Atopobium rimae ATCC 49626] Length = 304 Score = 262 bits (670), Expect = 4e-68, Method: Composition-based stats. Identities = 73/270 (27%), Positives = 123/270 (45%), Gaps = 12/270 (4%) Query: 7 SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66 + L TGLS ++ + D L + + A+ + + + G F ++ L Sbjct: 31 AEWLLSATTGLSRVELYTNFDKPLMQDELNRMHQAVEQRASGRPLQYVTGEMPFRHIVLK 90 Query: 67 LSSDTFEPRPETELLVDSALAFSLPRIEK------RDVVRILDLGTGTGAVCLALLKESP 120 PRPETE+LVD AL + + +R+L++G GTG + L++ E P Sbjct: 91 CEPGVLIPRPETEVLVDIALEGIDQKCAAGEKDGTPEPLRVLEVGVGTGCIALSIASERP 150 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG----LFDVIVSNPPYIE 176 V D+S +A+ +A+ N G+S+R ++ D S V F V+VSNPPYI Sbjct: 151 DTDVVATDVSPEAISLAQRNCDALGLSDRVHLIECDLVSGVPKEDVERFCVLVSNPPYIP 210 Query: 177 SVI-VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235 + I + EV++F+P+++LDGG DGL YR + L G+ +E+ Sbjct: 211 TEILKKSVPAEVKEFEPKLALDGGNDGLDVYRRLLQEAPHMLAPGGMLCIELYEGHLDRA 270 Query: 236 VRIFESRK-LFLVNAFKDYGGNDRVLLFCR 264 + ++ +D R+L+ R Sbjct: 271 AELARQAGVWRDISIKEDLTHRPRILVAYR 300 >gi|28198634|ref|NP_778948.1| protoporphyrinogen oxidase [Xylella fastidiosa Temecula1] gi|182681318|ref|YP_001829478.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Xylella fastidiosa M23] gi|32129592|sp|Q87DF7|HEMK_XYLFT RecName: Full=Protein methyltransferase hemK homolog; AltName: Full=M.XfaHemK2P gi|28056718|gb|AAO28597.1| protoporphyrinogen oxidase [Xylella fastidiosa Temecula1] gi|182631428|gb|ACB92204.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Xylella fastidiosa M23] gi|307579768|gb|ADN63737.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Xylella fastidiosa subsp. fastidiosa GB514] Length = 275 Score = 262 bits (670), Expect = 4e-68, Method: Composition-based stats. Identities = 77/259 (29%), Positives = 121/259 (46%), Gaps = 7/259 (2%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ + L + D L + + + + ++G R F+ + + Sbjct: 19 DAEALLLHALDCDRAWLFTHGDIPLAAAATESFQALVEQRARGIPVAYLIGRRGFWTLDV 78 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 +SS T PR ETE LV+ AL R++ R+ DLGTG+GA+ LA+ E P + + Sbjct: 79 IVSSATLIPRAETETLVEQAL----QRLDHASERRVADLGTGSGAIALAIACERPQAQVL 134 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLG 184 D S AL+IA NA +G++ + +W+ ++ G FD+IVSNPPYI Sbjct: 135 ATDNSAAALDIAARNASAHGLNH-VVFREGNWYEALLGERFDLIVSNPPYIAVTDPHLTQ 193 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 ++R F+P +L G DGL R +A G HL G +E G++Q V + + L Sbjct: 194 GDLR-FEPPSALISGGDGLDALRILAAGAPAHLRPGGWLVLEHGWDQGAAVRTLLHTAGL 252 Query: 245 FLVNAFKDYGGNDRVLLFC 263 V +D DRV + Sbjct: 253 VAVATMQDLEARDRVTVGR 271 >gi|163858861|ref|YP_001633159.1| heme biosynthesis protein [Bordetella petrii DSM 12804] gi|163262589|emb|CAP44892.1| heme biosynthesis protein [Bordetella petrii] Length = 275 Score = 262 bits (670), Expect = 4e-68, Method: Composition-based stats. Identities = 73/259 (28%), Positives = 118/259 (45%), Gaps = 9/259 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 ++ L V ++ ++ Q R L E + ++G R+F Sbjct: 19 PRLEARMLLEHVLQKPRAWMLAHDTDPIEAWQAQQYQALATRRLAGEPMAYLVGHREFMG 78 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 ++ D PRPETELLV++ALA+ + R +LDLGTG+G + +++ +P Sbjct: 79 HDFAVTPDVLIPRPETELLVETALAW----LADRPEAAVLDLGTGSGVIAVSIALGAPRA 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIESVIV 180 D S AL++A NA G R D Q W+ ++ +D+IVSNPPYI Sbjct: 135 AVTATDASAAALQVAVRNAARLGA--RVDFAQGSWYDALPARARYDLIVSNPPYIARDDQ 192 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 ++R F+PR +L G DGL I G + L G VE G++Q V ++ Sbjct: 193 HLDQGDLR-FEPRNALTDGADGLRDLAVIVAGAAARLRPGGALWVEHGWDQAAAVRQLLA 251 Query: 241 SRKLFLVNAFKDYGGNDRV 259 + + + +D G +R+ Sbjct: 252 AAGFDQITSRRDLSGIERI 270 >gi|296327944|ref|ZP_06870479.1| polypeptide chain release factor methyltransferase HemK [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|296154900|gb|EFG95682.1| polypeptide chain release factor methyltransferase HemK [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 383 Score = 262 bits (670), Expect = 4e-68, Method: Composition-based stats. Identities = 77/266 (28%), Positives = 138/266 (51%), Gaps = 8/266 (3%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTN-AIVRSLKHESIHRILGWRDF 60 L D+ V ++ + + + + + + ++R+ K + + ILG +F Sbjct: 103 NPLLDTEYIFSDVLKVNKNTLKYSMSREIKEEDKNKIREMLVLRAKKRKPLQYILGEWEF 162 Query: 61 YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120 Y + +S PR +TE+LV+ + E ILD+G+G+GA+ +A+ E Sbjct: 163 YGLPFKMSEGVLIPRADTEILVEQCIQLMREVEEPN----ILDIGSGSGAISIAVANELK 218 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESV 178 G+DI+ KA+++A N + N + E + ++S+ F ++ +D+IVSNPPYI Sbjct: 219 SSSVTGIDINEKAIKLAIENKILNKI-ENVNFIESNLFGKLDKDFKYDLIVSNPPYISKE 277 Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238 + L EV++++P+ +L DGL Y+ I+ +L G + EIGYNQ DV +I Sbjct: 278 EYETLMPEVKNYEPQNALTDLGDGLHFYKEISKLAGEYLKDTGYLAFEIGYNQAKDVSKI 337 Query: 239 FESRKLFLVNAFKDYGGNDRVLLFCR 264 + +++ KDYGGNDRV++ + Sbjct: 338 LQDNNFAILSIVKDYGGNDRVIIAKK 363 Score = 40.1 bits (93), Expect = 0.36, Method: Composition-based stats. Identities = 3/45 (6%), Positives = 17/45 (37%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK 47 ++ + V L + + + L + ++ + + + ++ Sbjct: 22 PRLEAEKLVSYVLNLDRIALYIHYERELSEDEKTSIKQYLKKMVE 66 >gi|169833726|ref|YP_001694465.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptococcus pneumoniae Hungary19A-6] gi|168996228|gb|ACA36840.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptococcus pneumoniae Hungary19A-6] Length = 279 Score = 262 bits (670), Expect = 4e-68, Method: Composition-based stats. Identities = 78/249 (31%), Positives = 119/249 (47%), Gaps = 9/249 (3%) Query: 16 GLSSHQVIVDPDSVLD-DRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEP 74 LS I + + ++ F+ + + H+ I+G DFY + L + P Sbjct: 33 NLSFTDFIFALQQEVTTEEEKQFVEDIYQQLAAHKPAQYIIGQADFYGMHLKVDERVLIP 92 Query: 75 RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134 RPETE LV+ L +L + +LD+GTG+GA+ LAL K P + D+S +AL Sbjct: 93 RPETEELVELILTENLET-----NLSVLDIGTGSGAIALALAKNRPDWSVTAADVSQEAL 147 Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194 E+A NA + +SD F+ + +D+IVSNPPYI +GL V +P + Sbjct: 148 ELASENASNQNL--NIFFKKSDCFAEISEKYDIIVSNPPYISREDESEVGLNVLHSEPHL 205 Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDY 253 +L DGL+ Y IA+ +L G +EIGY Q V +F V KD Sbjct: 206 ALFADEDGLAIYCRIAEDAKDYLKDGGKIYLEIGYKQGQSVPELFRKHLPEKKVRTLKDQ 265 Query: 254 GGNDRVLLF 262 G +R+++ Sbjct: 266 FGQNRMVVI 274 >gi|118480363|ref|YP_897514.1| HemK family modification methylase [Bacillus thuringiensis str. Al Hakam] gi|118419588|gb|ABK88007.1| modification methylase, HemK family [Bacillus thuringiensis str. Al Hakam] Length = 283 Score = 262 bits (670), Expect = 4e-68, Method: Composition-based stats. Identities = 71/259 (27%), Positives = 114/259 (44%), Gaps = 7/259 (2%) Query: 8 HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67 LC V ++ ++++ + Q T I + ++ I ++G FY + Sbjct: 25 EIVLCHVLKMNRTGLLMNMREEITAEQETSFTEFIHKHVEGIPIQYMIGHEMFYGRSFFV 84 Query: 68 SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 + + PRPETE L+ L + + + D+GTG+GA+ + L E+ V Sbjct: 85 NEEVLIPRPETEELIVGVLERIERHF-GDEKLHVADIGTGSGAISITLALENKNLHVYTV 143 Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVIVDCLG 184 DI+ +++E+AK NA T G D S DV+VSNPPYI L Sbjct: 144 DIAQESIEVAKENAKTLGAE--VTFYHGDLLSPFYETGQKLDVVVSNPPYIPEEDWRGLS 201 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-K 243 V++ +P+ +L GG DGL YR + + L K + + EIG Q DV + + Sbjct: 202 PVVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEIGVGQGEDVKGLLQQAFP 261 Query: 244 LFLVNAFKDYGGNDRVLLF 262 V D G DR++ Sbjct: 262 HAHVEVVFDINGKDRMVFA 280 >gi|227486770|ref|ZP_03917086.1| polypeptide chain release factor methyltransferase HemK [Anaerococcus lactolyticus ATCC 51172] gi|227235240|gb|EEI85255.1| polypeptide chain release factor methyltransferase HemK [Anaerococcus lactolyticus ATCC 51172] Length = 264 Score = 262 bits (670), Expect = 4e-68, Method: Composition-based stats. Identities = 80/254 (31%), Positives = 131/254 (51%), Gaps = 8/254 (3%) Query: 11 LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70 L + G S ++++ + L+ Q L + I + + +G +FY++RL + Sbjct: 18 LTYILGKSKSYILMNQNLELNSEQNQRLNDIINKRKVSYPLQYAIGQWEFYDLRLKVDER 77 Query: 71 TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130 PR ETE++VD + +ILD+GTGTGA+ LAL K +G DI Sbjct: 78 ALIPRFETEIIVDYLIK------SPMKKEKILDIGTGTGAIALALAKNIENSFVIGSDIE 131 Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDF 190 +AL +A+ N V G ++ D ++SD F + G +D+I+SNPPYI+ + L E+ F Sbjct: 132 DRALSLARENKVFTG-TKNVDFIKSDLFKDISGAYDLIISNPPYIDKKDYESLEKELY-F 189 Query: 191 DPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAF 250 +P+ +L GG DGL YR I +L + G EIGYNQK + ++ ++ + Sbjct: 190 EPKSALYGGEDGLDFYREIIKNAGAYLCEGGHLVFEIGYNQKDILNKLLVNQGFVNIENI 249 Query: 251 KDYGGNDRVLLFCR 264 KD+ DR ++ + Sbjct: 250 KDFNDFDRFIIAQK 263 >gi|17547622|ref|NP_521024.1| methyltransferase [Ralstonia solanacearum GMI1000] gi|17429926|emb|CAD16610.1| probable methylase of polypeptide chain release factors protein [Ralstonia solanacearum GMI1000] Length = 306 Score = 262 bits (670), Expect = 4e-68, Method: Composition-based stats. Identities = 86/262 (32%), Positives = 122/262 (46%), Gaps = 11/262 (4%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 ++ + VTGLS Q+I +DD R L R L E + +LG R+F+ Sbjct: 39 PALEARMLVSHVTGLSRVQLITQDTCGIDDGTRTRLAELATRRLAGEPMAYLLGEREFFG 98 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 ++ PRP+TELLV+ AL RI+ RD +LDLGTG+G + + + Sbjct: 99 RMFQVTPAVLIPRPDTELLVEQALD----RIDDRDAPAVLDLGTGSGIIAVTIALARRDA 154 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-----FDVIVSNPPYIES 177 + D S AL +A NA G + L DW++++ FD+IVSNPPYI S Sbjct: 155 RVWATDTSADALAVAVRNAQALGAANMHAAL-GDWYAALPESDAPPVFDLIVSNPPYIAS 213 Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237 ++R F+P +L DGL H RTI G L DG +E GY+Q V Sbjct: 214 TDAHLGQGDLR-FEPAGALTDHGDGLRHLRTIVAGAPARLAADGWLLLEHGYDQGPAVRA 272 Query: 238 IFESRKLFLVNAFKDYGGNDRV 259 + V +D G+DR Sbjct: 273 LLADAGFADVFTAQDLTGHDRC 294 >gi|121603685|ref|YP_981014.1| HemK family modification methylase [Polaromonas naphthalenivorans CJ2] gi|120592654|gb|ABM36093.1| [protein release factor]-glutamine N5-methyltransferase [Polaromonas naphthalenivorans CJ2] Length = 283 Score = 262 bits (670), Expect = 4e-68, Method: Composition-based stats. Identities = 73/263 (27%), Positives = 111/263 (42%), Gaps = 13/263 (4%) Query: 4 LRDSHSFLCRVTGLS---SHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60 D+ L G ++ L +R E + I+G ++F Sbjct: 20 RLDAQLLLLHALGKPASARSWLLAHDTDALAQEVAEAFRALSLRRASGEPLAYIVGGKEF 79 Query: 61 YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120 + + L + + PRP+TE LV+ +LA L +++LDLGTG+GA+ LA+ Sbjct: 80 FGLALQVDARVLVPRPDTETLVEWSLA-VLKAPGLMPPLKVLDLGTGSGAIALAIAHSLK 138 Query: 121 ----FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE 176 + VD S AL++A+ NA G++ ++S W V G F +I SNPPYI Sbjct: 139 ATGREAQVTAVDASADALDVARENARRLGLA--VAFIESSWLQGVNGRFHLIASNPPYIA 196 Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236 S +P +L G+DGL R I HL G +E GY+Q V Sbjct: 197 SADPHL---AALAHEPLQALTAGMDGLDDIRDIIQQAPDHLLPGGWLLLEHGYDQAGRVR 253 Query: 237 RIFESRKLFLVNAFKDYGGNDRV 259 + R V +D G +R Sbjct: 254 ELLVQRGFLQVQGRQDLAGIERC 276 >gi|19704666|ref|NP_604228.1| methyltransferase [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|19714974|gb|AAL95527.1| Methyltransferase [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] Length = 354 Score = 262 bits (670), Expect = 4e-68, Method: Composition-based stats. Identities = 77/266 (28%), Positives = 138/266 (51%), Gaps = 8/266 (3%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTN-AIVRSLKHESIHRILGWRDF 60 L D+ V ++ + + + + + + ++R+ K + + ILG +F Sbjct: 74 NPLLDTEYIFSDVLKVNKNTLKYSMSREIKEEDKNKIREMLVLRAKKRKPLQYILGEWEF 133 Query: 61 YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120 Y + +S PR +TE+LV+ + E ILD+G+G+GA+ +A+ E Sbjct: 134 YGLPFKMSEGVLIPRADTEILVEQCIQLMREVEEPN----ILDIGSGSGAISIAVANELK 189 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESV 178 G+DI+ KA+++A N + N + E + ++S+ F ++ +D+IVSNPPYI Sbjct: 190 SSSVTGIDINEKAIKLAIENKILNKI-ENVNFIESNLFGKLDKDFKYDLIVSNPPYISKD 248 Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238 + L EV++++P+ +L DGL Y+ I+ +L G + EIGYNQ DV +I Sbjct: 249 EYETLMPEVKNYEPQNALTDLGDGLHFYKEISKLAGEYLKDTGYLAFEIGYNQAKDVSKI 308 Query: 239 FESRKLFLVNAFKDYGGNDRVLLFCR 264 + +++ KDYGGNDRV++ + Sbjct: 309 LQDNNFAILSIVKDYGGNDRVIIAKK 334 >gi|324329277|gb|ADY24537.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Bacillus thuringiensis serovar finitimus YBT-020] Length = 283 Score = 262 bits (670), Expect = 5e-68, Method: Composition-based stats. Identities = 71/259 (27%), Positives = 113/259 (43%), Gaps = 7/259 (2%) Query: 8 HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67 LC V + ++++ + Q T I + ++ I ++G FY + Sbjct: 25 EIVLCHVLKTNRTGLLMNMREEITAEQEKSFTEFIHKHVEGIPIQYMIGHEMFYGRSFFV 84 Query: 68 SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 + + PRPETE L+ L + + + D+GTG+GA+ + L E+ V Sbjct: 85 NEEVLIPRPETEELIVGVLERIERHF-GDEKIHVADIGTGSGAISITLALENKNLHVYTV 143 Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVIVDCLG 184 DI+ +++E+AK NA T G D S DV+VSNPPYI L Sbjct: 144 DIAQESIEVAKENAKTLGAE--VTFYHGDLLSPFYETGQKLDVVVSNPPYIPEEDWRGLS 201 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-K 243 V++ +P+ +L GG DGL YR + + L K + + EIG Q DV + + Sbjct: 202 PVVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEIGVGQGEDVKGLLQQAFP 261 Query: 244 LFLVNAFKDYGGNDRVLLF 262 V D G DR++ Sbjct: 262 HAHVEVVFDINGKDRMVFA 280 >gi|239817176|ref|YP_002946086.1| modification methylase, HemK family [Variovorax paradoxus S110] gi|239803753|gb|ACS20820.1| modification methylase, HemK family [Variovorax paradoxus S110] Length = 283 Score = 261 bits (669), Expect = 5e-68, Method: Composition-based stats. Identities = 81/259 (31%), Positives = 116/259 (44%), Gaps = 12/259 (4%) Query: 4 LRDSHSFLCRVTGL---SSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60 D+ L G ++ L D L+ + R L E + +LG ++F Sbjct: 25 RLDAQLLLLHALGRAPHDRAWLLAHDTDTLSDAAWSALSAQLPRRLAGEPVAYLLGEKEF 84 Query: 61 YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120 + + L + + PRP+TE LVD AL +E RD R+LDLGTG+GA+ LAL P Sbjct: 85 HGLGLQVDARVLVPRPDTETLVDWALQC----LEGRDAPRVLDLGTGSGAIALALQHARP 140 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180 VD S AL +A++NA G+ RF Q+ W G + VI SNPPYI + Sbjct: 141 DALVDAVDASADALAVAEANAQRLGLPVRFR--QAHWLDGAAGGYAVIASNPPYIAAGDP 198 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 +P +L G DGL+ R I HL G +E G++Q V ++ Sbjct: 199 HL---AALQHEPLAALVAGPDGLADIRQIVQQAPAHLADGGWLLLEHGHDQAAAVRQLLG 255 Query: 241 SRKLFLVNAFKDYGGNDRV 259 +R V + D G R Sbjct: 256 ARGFAEVQSRDDLAGIQRC 274 >gi|120600165|ref|YP_964739.1| HemK family modification methylase [Shewanella sp. W3-18-1] gi|146291907|ref|YP_001182331.1| HemK family modification methylase [Shewanella putrefaciens CN-32] gi|120560258|gb|ABM26185.1| modification methylase, HemK family [Shewanella sp. W3-18-1] gi|145563597|gb|ABP74532.1| modification methylase, HemK family [Shewanella putrefaciens CN-32] gi|319425198|gb|ADV53272.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Shewanella putrefaciens 200] Length = 282 Score = 261 bits (669), Expect = 5e-68, Method: Composition-based stats. Identities = 79/261 (30%), Positives = 127/261 (48%), Gaps = 8/261 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A D+ FL + + P+ L Q +++ K + I+G R+F++ Sbjct: 25 AHLDAEVFLLYCLNKNRAYLYTWPEKALTIDQWKRFQQMVLKRQKGVPVAHIVGEREFWS 84 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + ++ T PRP+TE+LV++AL L ++LDLGTGTGA+ LAL E + Sbjct: 85 LPFIVNDTTLIPRPDTEILVETALNLPLSTY-----AKVLDLGTGTGAIALALASERESW 139 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181 + VD A+ +A +N + + + LQSDWFS+V+ FD+IVSNPPYI+ Sbjct: 140 EITAVDKVDDAVALAIANRENLKLP-QVEILQSDWFSAVKSRDFDLIVSNPPYIDEADEH 198 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P+ +L +G + IA +L +G +E G+ Q V + Sbjct: 199 LHQGDVR-FEPQSALTAAEEGFADLYYIAKTARDYLKPNGYILLEHGFEQAVKLRGKLIE 257 Query: 242 RKLFLVNAFKDYGGNDRVLLF 262 V +D+G NDR + Sbjct: 258 LGYENVATVRDFGSNDRCTMG 278 >gi|332878223|ref|ZP_08445951.1| protein-(glutamine-N5) methyltransferase [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332683835|gb|EGJ56704.1| protein-(glutamine-N5) methyltransferase [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 281 Score = 261 bits (669), Expect = 5e-68, Method: Composition-based stats. Identities = 75/256 (29%), Positives = 124/256 (48%), Gaps = 8/256 (3%) Query: 9 SFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLS 68 L S + L ++ + AI H+ I ILG F++ R + Sbjct: 29 MLLEHYAKCSKATALACAKESLPEKVVTPIKEAIRELQNHKPIQYILGETVFFSYRFLVD 88 Query: 69 SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128 + PRPETE LVD L P + ++I+D+GTG+G + ++L K P + VD Sbjct: 89 ENVLIPRPETEELVDWVLTTVTPTSK---PLKIIDIGTGSGCIAISLAKSLPNAEVTAVD 145 Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWF--SSVEGLFDVIVSNPPYIESVIVDCLGLE 186 +S KAL++A+ NA NGV+ F LQ D S++ +D+I+SNPPY+ S+ + Sbjct: 146 VSAKALQVARRNAELNGVTINF--LQQDILQTSTLPDTYDIIISNPPYVRSLEKAEMQAN 203 Query: 187 VRDFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245 V +++P ++L D L Y IA + L+ G EI + + + +++ Sbjct: 204 VLEYEPHLALFVSDTDPLLFYDRIATLARKALSPQGSLFFEINQYLGDETIALLKAKGFE 263 Query: 246 LVNAFKDYGGNDRVLL 261 V +D GNDR+++ Sbjct: 264 KVVLRQDLSGNDRMIM 279 >gi|229082543|ref|ZP_04215006.1| Protein hemK [Bacillus cereus Rock4-2] gi|228700975|gb|EEL53498.1| Protein hemK [Bacillus cereus Rock4-2] Length = 283 Score = 261 bits (669), Expect = 5e-68, Method: Composition-based stats. Identities = 71/259 (27%), Positives = 116/259 (44%), Gaps = 7/259 (2%) Query: 8 HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67 LC V ++ ++++ + + Q T I + ++ I ++G+ FY + Sbjct: 25 EIVLCHVLKVNRTGLLMNMREEITEDQEKSFTEFIHKHVEGIPIQYMIGYEMFYGRSFFV 84 Query: 68 SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 + + PRPETE L+ L + + + D+GTG+GA+ + L E+ V Sbjct: 85 NEEVLIPRPETEELIVGVLERIERHF-GDEKLHVADIGTGSGAISITLALENENLHVYTV 143 Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG---LFDVIVSNPPYIESVIVDCLG 184 DI+ +++E+AK NA G D S DV+VSNPPYI L Sbjct: 144 DIAQESIEVAKENAKALGAE--VTFYHGDLLSPFHKTGQKLDVVVSNPPYIPEEDWRGLS 201 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-K 243 V++ +P+ +L GG DGL YR + + L K + + EIG Q DV R+ + Sbjct: 202 PVVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEIGVGQGGDVKRLLQQAFP 261 Query: 244 LFLVNAFKDYGGNDRVLLF 262 V D G DR++ Sbjct: 262 HAHVEVVFDINGKDRMVFA 280 >gi|237744128|ref|ZP_04574609.1| methyltransferase [Fusobacterium sp. 7_1] gi|229431357|gb|EEO41569.1| methyltransferase [Fusobacterium sp. 7_1] Length = 370 Score = 261 bits (669), Expect = 5e-68, Method: Composition-based stats. Identities = 77/265 (29%), Positives = 136/265 (51%), Gaps = 8/265 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTN-AIVRSLKHESIHRILGWRDFY 61 L D+ V ++ + + + + + ++R+ K + + ILG +FY Sbjct: 91 PLLDTEYIFSDVLKVNKNTLKYSMSREIKKEDKDKIREMLVLRAKKRKPLQYILGEWEFY 150 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 + ++ PR +TE+LV+ + E ILD+G+G+GA+ +A+ E Sbjct: 151 GLPFKVNEGVLIPRADTEILVEQCIQLMREVEEPN----ILDIGSGSGAISIAIANELKS 206 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVI 179 G+DI+ KA+E+A N N + E + ++S+ F ++ +D+IVSNPPYI Sbjct: 207 SSVTGIDINEKAIELAIENKTLNKI-ENVNFIESNLFEKLDKDFKYDLIVSNPPYISKEE 265 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 L EV++++P+ +L DGL YR I+ +L G + EIGYNQ DV +I Sbjct: 266 YRTLMPEVKNYEPQNALTDLGDGLYFYREISKLAGEYLKDTGYLAYEIGYNQAKDVTKIL 325 Query: 240 ESRKLFLVNAFKDYGGNDRVLLFCR 264 ++ +++ KDYGGN+RV++ + Sbjct: 326 QNNNFDVLSVIKDYGGNNRVVIAKK 350 Score = 40.1 bits (93), Expect = 0.36, Method: Composition-based stats. Identities = 3/45 (6%), Positives = 17/45 (37%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK 47 ++ + V L + + + L + ++ + + + ++ Sbjct: 9 PRLEAEKLVSYVLNLDRIALYIHYERELSEDEKTSIKQYLKKMVE 53 >gi|229105921|ref|ZP_04236545.1| Protein hemK [Bacillus cereus Rock3-28] gi|228677495|gb|EEL31748.1| Protein hemK [Bacillus cereus Rock3-28] Length = 283 Score = 261 bits (669), Expect = 6e-68, Method: Composition-based stats. Identities = 70/259 (27%), Positives = 114/259 (44%), Gaps = 7/259 (2%) Query: 8 HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67 LC V + ++++ + Q I + ++ I +LG+ FY + Sbjct: 25 ELVLCHVLKTNRTGMLMNMREEITAEQEKSFAEFIHKHVEGIPIQYMLGYEMFYGRSFFV 84 Query: 68 SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 + + PRPETE L+ L + + + D+GTG+GA+ + L E+ V Sbjct: 85 NEEVLIPRPETEELIVGVLERIERHF-GNEKLHVADIGTGSGAISITLALENKNLHVYTV 143 Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSS---VEGLFDVIVSNPPYIESVIVDCLG 184 DI+ +++E+AK NA G D S + DV+VSNPPYI L Sbjct: 144 DIAQESIEVAKENAKALGAE--VTFYHGDLLSPFYKIHQKLDVVVSNPPYITEEDWRGLS 201 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-K 243 V++++P+ +L GG DGL YR + + L K + + EIG Q DV + + Sbjct: 202 PVVKEYEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEIGVGQGEDVKELLQQAFP 261 Query: 244 LFLVNAFKDYGGNDRVLLF 262 V D G DR++ Sbjct: 262 HAHVEVVFDINGKDRMVFA 280 >gi|78043637|ref|YP_361355.1| HemK family modification methylase [Carboxydothermus hydrogenoformans Z-2901] gi|77995752|gb|ABB14651.1| modification methylase, HemK family [Carboxydothermus hydrogenoformans Z-2901] Length = 285 Score = 261 bits (669), Expect = 6e-68, Method: Composition-based stats. Identities = 81/267 (30%), Positives = 134/267 (50%), Gaps = 11/267 (4%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 D+ L V G+S + P+ VL + + + + R + ++G ++FY Sbjct: 24 PALDAELLLAHVLGISRVAIYTRPERVLSEYEWERFVDHVERRASRIPLAYLIGKKEFYG 83 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + ++ + PRPETEL+V+ + F R + + D+GTG+GAV +AL P Sbjct: 84 LDFFVTPEVLIPRPETELMVEEGINFLRQY---RGLKLVADVGTGSGAVGVALACHIPLG 140 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-----EGLFDVIVSNPPYIES 177 +DIS +AL++A+ NA +GV ER D + G F +I +N PYI + Sbjct: 141 LFFLLDISEEALKVARVNAHHHGVDERVILGHGDLLEPLSKLDFSGKFSLITANLPYIPT 200 Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237 + L EV+ +P+I+LDGG DGL YR + + L +DG+ +EI Q + Sbjct: 201 EELSTLMPEVQK-EPQIALDGGEDGLMLYRRLLPEAHKLLAEDGVMLLEIAPYQGKAITA 259 Query: 238 IFESRKLFLVNAFKDYGGNDRVLLFCR 264 E+ KL+ V KD G+DR+++ + Sbjct: 260 --EAEKLYRVEIKKDLAGHDRLVILRK 284 >gi|160900909|ref|YP_001566491.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Delftia acidovorans SPH-1] gi|160366493|gb|ABX38106.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Delftia acidovorans SPH-1] Length = 289 Score = 261 bits (669), Expect = 6e-68, Method: Composition-based stats. Identities = 77/263 (29%), Positives = 112/263 (42%), Gaps = 10/263 (3%) Query: 3 ALRDSHSFLCRVTGLS---SHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRD 59 A D+ L V G ++ + +L Q R L E + +LG ++ Sbjct: 20 ARIDAQMLLLHVLGRQSGGRAWLLTHDEDMLTAPQAEAYATLCARRLGTEPVAYLLGHKE 79 Query: 60 FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119 FY + L + + +PRP+TE LVD AL + + R++DLGTG+GA+ LAL + Sbjct: 80 FYGLDLAVDARVLDPRPDTETLVDWALELMPAQSQAARACRVVDLGTGSGAIALALQSQR 139 Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL--FDVIVSNPPYIES 177 P VD S AL +A +NA + +F W + G FD+IVSNPPYI Sbjct: 140 PGATVWAVDASADALAVASANATRLQLGVQFA--HGSWLQPLAGQAPFDLIVSNPPYIRD 197 Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237 + +P +L G DGL R I L + G +E G++Q V Sbjct: 198 DDPHL---QALAHEPLSALASGADGLVDIRAIITQAPALLVRGGWLLMEHGWDQADAVAA 254 Query: 238 IFESRKLFLVNAFKDYGGNDRVL 260 + V D GG R Sbjct: 255 LLRHAGFGDVQHRHDLGGIARCT 277 >gi|15902969|ref|NP_358519.1| HemK protein [Streptococcus pneumoniae R6] gi|116517180|ref|YP_816385.1| HemK protein [Streptococcus pneumoniae D39] gi|15458533|gb|AAK99729.1| HemK protein homolog; possible protoporphyrinogen oxidase [Streptococcus pneumoniae R6] gi|116077756|gb|ABJ55476.1| HemK protein [Streptococcus pneumoniae D39] Length = 279 Score = 261 bits (668), Expect = 6e-68, Method: Composition-based stats. Identities = 79/248 (31%), Positives = 123/248 (49%), Gaps = 9/248 (3%) Query: 16 GLSSHQVIVDPDSVLD-DRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEP 74 LS I + + ++ F+ + + H+ I+G DFY + L + P Sbjct: 33 NLSFTDFIFALQQEVTTEEEKQFVEDIYQQLAAHKPAQYIIGQADFYGMHLKVDERVLIP 92 Query: 75 RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134 RPETE LV+ L +L + +LD+GTG+GA+ LAL K P + DIS +AL Sbjct: 93 RPETEELVELILTENLET-----NLSVLDIGTGSGAIALALAKNRPDWSVTAADISQEAL 147 Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194 ++A+ NA + + +SD F+ + +D+IVSNPPYI +GL V +P + Sbjct: 148 DLARENAKNQNL--QIFLKKSDCFTEISEKYDIIVSNPPYISREDESEVGLNVLYSEPHL 205 Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDY 253 +L DGL+ YR IA+ + +L G +EIGY Q V +F V KD Sbjct: 206 ALFADEDGLAIYRRIAEDATDYLKDSGKIYLEIGYKQGQCVPELFRKHLPEKRVRTLKDQ 265 Query: 254 GGNDRVLL 261 G +R+++ Sbjct: 266 FGQNRMVV 273 >gi|294142152|ref|YP_003558130.1| hemK family protein [Shewanella violacea DSS12] gi|293328621|dbj|BAJ03352.1| hemK family protein [Shewanella violacea DSS12] Length = 280 Score = 261 bits (668), Expect = 6e-68, Method: Composition-based stats. Identities = 78/262 (29%), Positives = 126/262 (48%), Gaps = 8/262 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 D+ L + + PD L Q T + R + I I+G R+F++ Sbjct: 23 PKLDAEVMLLHIIHKQRGYLYTWPDERLASEQVVDYTKMVHRRVLGTPIAHIVGEREFWS 82 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + ++ T PRP+TE+LV++AL + + ++LDLGTGTGA+ L+L E + Sbjct: 83 LPFMVNPTTLIPRPDTEILVETAL-----NLPLAENAKVLDLGTGTGAIALSLAYEKSQW 137 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181 + VD +A+ +AK+N + + + ++SDWF SV F++IVSNPPYI+ Sbjct: 138 QITAVDKIIEAVALAKANRAHLKLQ-QVEIIKSDWFDSVTCYDFNLIVSNPPYIDETDAH 196 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P+ +L G G + IA +L G +E GY Q + + + Sbjct: 197 LDQGDVR-FEPQSALTAGEAGFADLYHIASSARDYLAPGGYLLLEHGYEQAIQLRKKMIE 255 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 V +D+G NDR L Sbjct: 256 LGYENVATVRDFGSNDRCTLGR 277 >gi|168487486|ref|ZP_02711994.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptococcus pneumoniae CDC1087-00] gi|183569705|gb|EDT90233.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptococcus pneumoniae CDC1087-00] Length = 279 Score = 261 bits (668), Expect = 6e-68, Method: Composition-based stats. Identities = 78/248 (31%), Positives = 119/248 (47%), Gaps = 9/248 (3%) Query: 16 GLSSHQVIVDPDSVLD-DRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEP 74 LS I + + ++ F+ + + H+ I+G DFY + L + P Sbjct: 33 NLSFTDFIFALQQEVTTEEEKQFIEDIYQQLAAHKPAQYIIGQADFYGMHLKVDERVLIP 92 Query: 75 RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134 RPETE LV+ L +L + +LD+GTG+GA+ LAL K P + D+S +AL Sbjct: 93 RPETEELVELILTENLET-----NLSVLDIGTGSGAIALALAKNRPDWSVTAADVSQEAL 147 Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194 E+A NA + +SD F+ + +D+IVSNPPYI +GL V +P + Sbjct: 148 ELASENASDQNL--NIFFKKSDCFAEISEKYDIIVSNPPYISREDESEVGLNVLHSEPHL 205 Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDY 253 +L DGL+ Y IA+ +L G +EIGY Q V +F V KD Sbjct: 206 ALFADEDGLAIYCRIAEDAKDYLKDGGKIYLEIGYKQGQSVPELFRKHLPEKKVRTLKDQ 265 Query: 254 GGNDRVLL 261 G +R+++ Sbjct: 266 FGQNRMVV 273 >gi|297620932|ref|YP_003709069.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Waddlia chondrophila WSU 86-1044] gi|297376233|gb|ADI38063.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Waddlia chondrophila WSU 86-1044] Length = 283 Score = 261 bits (668), Expect = 6e-68, Method: Composition-based stats. Identities = 81/263 (30%), Positives = 123/263 (46%), Gaps = 5/263 (1%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 +++ + + G+ ++ + D L D + AI R +K E I G DF++ Sbjct: 22 PRKEAATIIGDALGMKPLELYMQHDRPLTDSELKRCREAIARRVKGEPNQYIRGIVDFFD 81 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 LT+ PR ETE+LVD + E + D+ TG+G + +A+ K+ P Sbjct: 82 CVLTVDKRVLIPRMETEILVDKIVKEL--ENEDLKGKTLWDVCTGSGCIGIAIKKKFPEL 139 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181 + D+S ALE A NAV NGV R ++ D +G D IVSNPPYI Sbjct: 140 EVALSDLSADALEAASENAVKNGVDVRI--VKGDLLEPFKGERADFIVSNPPYIREEEFS 197 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 L +EV++F+P+++L G GL YR + + L G +EIG Q D+V+IF Sbjct: 198 TLAVEVKNFEPKMALVSGETGLEIYRRFNEELPGFLKAGGRIWMEIGMGQGEDIVKIFSG 257 Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264 V +D+ DR R Sbjct: 258 ENWENVWFEQDWSQLDRFFYATR 280 >gi|225858812|ref|YP_002740322.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptococcus pneumoniae 70585] gi|225720454|gb|ACO16308.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptococcus pneumoniae 70585] Length = 279 Score = 261 bits (668), Expect = 6e-68, Method: Composition-based stats. Identities = 80/262 (30%), Positives = 126/262 (48%), Gaps = 14/262 (5%) Query: 6 DSHSFLCRV----TGLSSHQVIVDPDSVLD-DRQRFFLTNAIVRSLKHESIHRILGWRDF 60 ++ V LS I + + ++ F+ + + H+ I+G DF Sbjct: 20 EAEIL-SFVYRSLKNLSFTDFIFALQQEVTTEEEKQFVEDIYQQLAAHKPAQYIIGQADF 78 Query: 61 YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120 Y + L + PRPETE LV+ L +L + +LD+GTG+GA+ LAL K P Sbjct: 79 YGMHLKVDERVLIPRPETEELVELILTENLET-----NLSVLDIGTGSGAIALALAKNRP 133 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180 + DIS +AL++A+ NA + + +SD F+ + +D+IVSNPPYI Sbjct: 134 DWSVTAADISQEALDLARENAKNQNL--QIFLKKSDCFTEISEKYDIIVSNPPYISREDE 191 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 +GL V +P ++L DGL+ YR IA+ + +L G +EIGY Q V +F Sbjct: 192 SEVGLNVLYSEPHLALFADEDGLAIYRRIAEDATDYLKDSGKIYLEIGYKQGQCVPELFR 251 Query: 241 SR-KLFLVNAFKDYGGNDRVLL 261 V KD G +R+++ Sbjct: 252 KHLPEKRVRTLKDQFGQNRMVV 273 >gi|226946180|ref|YP_002801253.1| Modification methylase HemK [Azotobacter vinelandii DJ] gi|226721107|gb|ACO80278.1| Modification methylase HemK [Azotobacter vinelandii DJ] Length = 276 Score = 261 bits (668), Expect = 7e-68, Method: Composition-based stats. Identities = 82/262 (31%), Positives = 128/262 (48%), Gaps = 8/262 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 D+ L G + + P+ + + + R E + ILG + F++ Sbjct: 19 PRLDAEWLLAAALGKPASYLRAWPEREVPEAPAVRFAADLARRRAGEPVAYILGRQGFWS 78 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L ++ T PRP+TELLV++ALA + +LDLGTG+GA+ LAL E P + Sbjct: 79 LDLEVAPATLIPRPDTELLVETALA-----LLPATPAEVLDLGTGSGAIALALAAERPAW 133 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181 + GVD +A+ +A+ N G+ L SDWFS+++G F +I NPPYI + Sbjct: 134 RLTGVDRVMEAVALAERNRRRLGLG-NATFLPSDWFSALDGRRFALIAGNPPYIAADDPH 192 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P +L G DGL R I HL G +E G+ Q V + + Sbjct: 193 LALGDVR-FEPASALVAGADGLDDIRRIVVEAPGHLQAGGWLLLEHGFEQAGAVRGLLTT 251 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 R V++ +D GG++R+ L Sbjct: 252 RGFVEVHSRRDLGGHERISLGR 273 >gi|47570470|ref|ZP_00241103.1| hemK protein [Bacillus cereus G9241] gi|47552866|gb|EAL11284.1| hemK protein [Bacillus cereus G9241] Length = 283 Score = 261 bits (668), Expect = 7e-68, Method: Composition-based stats. Identities = 71/259 (27%), Positives = 113/259 (43%), Gaps = 7/259 (2%) Query: 8 HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67 LC V + ++++ + Q I + ++ I ++G FY + Sbjct: 25 EIVLCHVLKTNRTGLLMNMREEITAEQETSFKEFIHKHVEGIPIQYMIGHEMFYGRSFFV 84 Query: 68 SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 + + PRPETE L+ L + + + + D+GTG+GA+ + L E+ V Sbjct: 85 NEEVLIPRPETEELIVGVLERIERHFD-DEKLHVADIGTGSGAISITLALENKNLHVYTV 143 Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVIVDCLG 184 DI+ +++E+AK NA T G D S DV+VSNPPYI L Sbjct: 144 DIAQESIEVAKENAKTLGAE--VTFYHGDLLSPFYETGQKLDVVVSNPPYIPEEDWRGLS 201 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-K 243 V++ +P+ +L GG DGL YR D + L K + + EIG Q DV + + Sbjct: 202 PVVKEHEPKRALVGGEDGLDFYRRFMDELPNVLQKKAIVAFEIGVGQGEDVKGLLQQAFP 261 Query: 244 LFLVNAFKDYGGNDRVLLF 262 V D G DR++ Sbjct: 262 HAHVEIVFDINGKDRMVFA 280 >gi|228949049|ref|ZP_04111321.1| Protein hemK [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228810622|gb|EEM56971.1| Protein hemK [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] Length = 283 Score = 261 bits (668), Expect = 7e-68, Method: Composition-based stats. Identities = 72/259 (27%), Positives = 114/259 (44%), Gaps = 7/259 (2%) Query: 8 HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67 LC V + ++++ + Q T I + +K I ++G FY + Sbjct: 25 EIVLCHVLKTNRTGLLMNMREEITAEQETSFTEFIHKHVKGIPIQYMIGHEMFYGRSFFV 84 Query: 68 SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 + + PRPETE L+ L + + + D+GTG+GA+ + L E+ V Sbjct: 85 NEEVLIPRPETEELIVGVLERIERHF-GDEKLHVADIGTGSGAISITLALENKNLYVYTV 143 Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVIVDCLG 184 DI+ +++E+AK NA T G D S DV+VSNPPYI L Sbjct: 144 DIAQESIEVAKENAKTLGAE--VTFYHGDLLSPFYETGQKLDVVVSNPPYIPEEDWRGLS 201 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-K 243 V++++P+ +L GG DGL YR + + L K + + EIG Q DV + + Sbjct: 202 PVVKEYEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEIGVGQGEDVKGLLQQAFP 261 Query: 244 LFLVNAFKDYGGNDRVLLF 262 V D G DR++ Sbjct: 262 HAHVEVVFDINGKDRMVFA 280 >gi|217962817|ref|YP_002341395.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacillus cereus AH187] gi|217067117|gb|ACJ81367.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacillus cereus AH187] Length = 283 Score = 261 bits (668), Expect = 7e-68, Method: Composition-based stats. Identities = 71/259 (27%), Positives = 112/259 (43%), Gaps = 7/259 (2%) Query: 8 HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67 LC V + ++++ + Q T I + ++ I ++G FY + Sbjct: 25 EIVLCHVLKTNRTGLLMNMREEITAEQEKSFTEFIHKHVEGIPIQYMIGHEMFYGRSFFV 84 Query: 68 SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 + + PRPETE L+ L + + + D+GTG+GA+ + L E+ V Sbjct: 85 NEEVLIPRPETEELIVGVLERIERHFS-DEKIHVADIGTGSGAISITLALENKNLHVYTV 143 Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVIVDCLG 184 DI+ ++E+AK NA T G D S DV+VSNPPYI L Sbjct: 144 DIAQGSIEVAKENAKTLGAE--VTFYHGDLLSPFYETGQKLDVVVSNPPYIPEEDWRGLS 201 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-K 243 V++ +P+ +L GG DGL YR + + L K + + EIG Q DV + + Sbjct: 202 PVVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEIGIGQGEDVKGLLQQAFP 261 Query: 244 LFLVNAFKDYGGNDRVLLF 262 V D G DR++ Sbjct: 262 HAHVEVVFDINGKDRMVFA 280 >gi|325291371|ref|YP_004267552.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Syntrophobotulus glycolicus DSM 8271] gi|324966772|gb|ADY57551.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Syntrophobotulus glycolicus DSM 8271] Length = 287 Score = 261 bits (668), Expect = 7e-68, Method: Composition-based stats. Identities = 75/261 (28%), Positives = 121/261 (46%), Gaps = 5/261 (1%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 ++ L +S ++ ++ + L Q + + K E + ++ R+F Sbjct: 28 DPRTEADLLLAHSLRISRDRLYLEREGTLTSIQADRFMELLEQRGKREPLAYLVKTREFM 87 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 + + PRPETE+L++ + + R K +LDLGTG+G + +A + Sbjct: 88 GLDFYVDRRVLIPRPETEMLIEKLIELAEKRAGKDKEYSLLDLGTGSGVMAIAAARYIAG 147 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIV 180 K VDIS AL +A+ NAV +GV D Q D F+ V FD I++NPPY+ + Sbjct: 148 VKITAVDISEDALTVARQNAVKHGVE--IDFRQGDLFTPVANQKFDWILTNPPYVSLPEM 205 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 + EV +P ++L GG DGL YR +A L+ G EIG Q V ++F Sbjct: 206 EDCSPEVLR-EPHLALCGGEDGLEIYRRLAAQAGDFLHPGGKLLAEIGSAQAPAVCKLFA 264 Query: 241 SRKLFLVNAFKDYGGNDRVLL 261 + F D G +R++L Sbjct: 265 EKGYST-KVFNDLAGLNRMIL 284 >gi|229000114|ref|ZP_04159684.1| Protein hemK [Bacillus mycoides Rock3-17] gi|229007634|ref|ZP_04165228.1| Protein hemK [Bacillus mycoides Rock1-4] gi|228753645|gb|EEM03089.1| Protein hemK [Bacillus mycoides Rock1-4] gi|228759651|gb|EEM08627.1| Protein hemK [Bacillus mycoides Rock3-17] Length = 283 Score = 261 bits (668), Expect = 7e-68, Method: Composition-based stats. Identities = 71/259 (27%), Positives = 119/259 (45%), Gaps = 7/259 (2%) Query: 8 HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67 LC V + ++++ + + Q+ TN I + + + ++G+ FY + Sbjct: 25 EIVLCHVLKTNRTGLMMNMREEMSEEQQKTFTNFIHKHVGGIPVQYMMGYEMFYGRSFFV 84 Query: 68 SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 + + PRPETE L+ L R+ + + I D+GTG+GA+ + L E+ + V Sbjct: 85 NEEVLIPRPETEELIVGVLDRI-QRMFGKQELHIADIGTGSGAISITLALENQNLRMYTV 143 Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVIVDCLG 184 DI+ +++E+AK NA G D S DV+VSNPPYI L Sbjct: 144 DIAQESIEVAKENAKALGA--NVTFYHGDLLSPFYETGQKLDVVVSNPPYIPEEDWRGLS 201 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-K 243 V++ +P+ +L GG DGL YR + + L + + + E+G Q DV R+ + Sbjct: 202 PVVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQRKAIVAFEVGIGQGEDVKRLLQQTFP 261 Query: 244 LFLVNAFKDYGGNDRVLLF 262 V D G DR++ Sbjct: 262 HAHVEVVFDINGKDRMVFA 280 >gi|295697769|ref|YP_003591007.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacillus tusciae DSM 2912] gi|295413371|gb|ADG07863.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacillus tusciae DSM 2912] Length = 296 Score = 261 bits (668), Expect = 7e-68, Method: Composition-based stats. Identities = 84/278 (30%), Positives = 129/278 (46%), Gaps = 20/278 (7%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 A + + RV G+ + PD VL + + + R + E + I G +FY Sbjct: 21 DARLSAEVLIQRVLGVGKAHLYAHPDRVLTQEEERRIAEGVSRRARREPLQYITGVVEFY 80 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 + L + D PRPETE LV+ L + + I D+GTG+GA+ +AL P Sbjct: 81 GLELEVGPDVLIPRPETEGLVERVLGWRSMW----ERPLIADVGTGSGALAVALAHHWPG 136 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESV 178 + VG+D+S A ++A N +G+++R +Q D + D++VSNPPYI S Sbjct: 137 ARIVGIDVSPGAFQVASRNIRRHGLADRVSLVQGDLLFPLLDHGQRADIVVSNPPYIPSG 196 Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238 +D L EV F+PR +LDGG DGL YR + + L++ G +VE+G Q V R+ Sbjct: 197 DIDGLQPEVARFEPRAALDGGGDGLDVYRRLFFQLPEVLSRPGAVAVEVGAGQAGAVRRL 256 Query: 239 FES-------------RKLFLVNAFKDYGGNDRVLLFC 263 E +D G +RV+ Sbjct: 257 LEQSCGVVAGGAGGAAAVQMETGTDRDLAGIERVVWAR 294 >gi|332361224|gb|EGJ39028.1| protein-(glutamine-N5) methyltransferase [Streptococcus sanguinis SK1056] Length = 276 Score = 261 bits (668), Expect = 7e-68, Method: Composition-based stats. Identities = 82/262 (31%), Positives = 124/262 (47%), Gaps = 11/262 (4%) Query: 3 ALRDSHSF--LCRVT-GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRD 59 A ++ S + R LS ++ + + R L + L H I G D Sbjct: 17 AGEEAESLSFVYRALKNLSFTDFVLKLRTEVSQEDRDQLKTIQEQLLAHRPAQYINGRSD 76 Query: 60 FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119 F + L + PRPETE LV+ L+ + + +LD+GTG+GA+ LAL Sbjct: 77 FLGLSLKVDERVLIPRPETEELVELILSEN-----PESSLSVLDIGTGSGAIALALANSR 131 Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179 ++ D+S AL +A+ NA + +S +QSD F ++ G FD+IVSNPPYI Sbjct: 132 SDWQITASDLSGDALALAEENAQSCNLS--LTFVQSDCFEAISGSFDIIVSNPPYISEAD 189 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 D +GL V +P ++L DG + YR IA+ +L + G +EIGY Q V + Sbjct: 190 KDEVGLNVLTSEPHMALFAEEDGYAVYRKIAEQAGDYLTEKGKIYLEIGYKQGDGVRELL 249 Query: 240 ESR-KLFLVNAFKDYGGNDRVL 260 E + KD G DR++ Sbjct: 250 EKNFPQKRIRVLKDQFGKDRMV 271 >gi|300117842|ref|ZP_07055609.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacillus cereus SJ1] gi|298724706|gb|EFI65381.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacillus cereus SJ1] Length = 283 Score = 261 bits (668), Expect = 8e-68, Method: Composition-based stats. Identities = 71/259 (27%), Positives = 114/259 (44%), Gaps = 7/259 (2%) Query: 8 HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67 LC V + ++++ + Q T I + ++ I ++G FY + Sbjct: 25 EIVLCHVLKTNRTGLLMNMREEITAEQETSFTEFIHKHVEGIPIQYMIGHEMFYGRSFIV 84 Query: 68 SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 + + PRPETE L+ L + + + + D+GTG+GA+ + L E+ V Sbjct: 85 NEEVLIPRPETEELIVGVLERIERHFD-DEKLHVADIGTGSGAISITLALENKNLHVYTV 143 Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVIVDCLG 184 DI+ +++E+AK NA T G D S DV+VSNPPYI L Sbjct: 144 DIAQESIEVAKENAKTLGAE--VTFYHGDLLSPFYETGQKLDVVVSNPPYIPEEDWRGLS 201 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-K 243 V++ +P+ +L GG DGL YR + + L K + + EIG Q DV + + Sbjct: 202 PVVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEIGVGQGEDVKGLLQQAFP 261 Query: 244 LFLVNAFKDYGGNDRVLLF 262 V D G DR++ Sbjct: 262 HAHVEVVFDINGKDRMVFA 280 >gi|228994047|ref|ZP_04153948.1| Protein hemK [Bacillus pseudomycoides DSM 12442] gi|228765695|gb|EEM14348.1| Protein hemK [Bacillus pseudomycoides DSM 12442] Length = 283 Score = 261 bits (668), Expect = 8e-68, Method: Composition-based stats. Identities = 71/259 (27%), Positives = 118/259 (45%), Gaps = 7/259 (2%) Query: 8 HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67 LC V + ++++ + + Q+ TN I + + + ++G+ FY + Sbjct: 25 EIVLCHVLKTNRTGLMMNMREEMSEEQQKTFTNFIHKHVGGIPVQYMMGYEMFYGRSFFV 84 Query: 68 SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 + + PRPETE L+ L R+ + + I D+GTG+GA+ + L E+ V Sbjct: 85 NEEVLIPRPETEELIVGVLDRI-QRMFGKQELHIADIGTGSGAISITLALENQNLHMYTV 143 Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVIVDCLG 184 DI+ +++E+AK NA G D S DV+VSNPPYI L Sbjct: 144 DIAQESIEVAKENAKALGA--NVTFYHGDLLSPFYETGQKLDVVVSNPPYIPEEDWRGLS 201 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-K 243 V++ +P+ +L GG DGL YR + + L + + + E+G Q DV R+ + Sbjct: 202 PVVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQRKAIVAFEVGIGQGEDVKRLLQQTFP 261 Query: 244 LFLVNAFKDYGGNDRVLLF 262 V D G DR++ Sbjct: 262 HAHVEVVFDINGKDRMVFA 280 >gi|304440461|ref|ZP_07400350.1| protein-(glutamine-N5) methyltransferase [Peptoniphilus duerdenii ATCC BAA-1640] gi|304371213|gb|EFM24830.1| protein-(glutamine-N5) methyltransferase [Peptoniphilus duerdenii ATCC BAA-1640] Length = 267 Score = 261 bits (668), Expect = 8e-68, Method: Composition-based stats. Identities = 84/258 (32%), Positives = 129/258 (50%), Gaps = 15/258 (5%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 +S L V +S +I++ + L+ + + + + R E + ILG +FY + + Sbjct: 25 ESRRILMEVLDVSMTYLILNEEQELNKEKEEEIIDILNRRKHGEPLQYILGHSEFYGLDI 84 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 L PRP+TE+ V++ L + + L+LG G+GAV ++ K S K Sbjct: 85 LLKGKVLIPRPDTEVSVENILKRL------KSGDKFLELGVGSGAVICSVAKNS-DAKCY 137 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185 GVDIS ALE K N + + SD F +VEG +D+I SNPPYI+S + L + Sbjct: 138 GVDISEDALECTKLNIENLNLK-NVEVKYSDLFENVEGKYDIIYSNPPYIKSHEILNLQV 196 Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245 E+ D++PR++LDGG DGL Y+ I +LN+ G EIG++Q FE Sbjct: 197 EITDYEPRLALDGGEDGLDFYKKIISEYRDYLNEGGYLIFEIGHDQGE----FFEKLG-- 250 Query: 246 LVNAFKDYGGNDRVLLFC 263 KD G RV++ Sbjct: 251 -AEIIKDLNGLPRVVIMR 267 >gi|229164276|ref|ZP_04292209.1| Protein hemK [Bacillus cereus R309803] gi|228619216|gb|EEK76109.1| Protein hemK [Bacillus cereus R309803] Length = 283 Score = 261 bits (668), Expect = 8e-68, Method: Composition-based stats. Identities = 70/259 (27%), Positives = 115/259 (44%), Gaps = 7/259 (2%) Query: 8 HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67 LC V + ++++ + Q T I + ++ I ++G+ FY + Sbjct: 25 EIVLCHVLKTNRTGLLMNMREEITVEQEKSFTEFIHKHVEGIPIQYMMGYEMFYGRSFFV 84 Query: 68 SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 + + PRPETE L+ L ++ + + D+GTG+GA+ + L E+ V Sbjct: 85 NEEVLIPRPETEELIVGVLERVERHFGDKE-LHVADIGTGSGAISITLALENKNLHVYTV 143 Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVIVDCLG 184 DI+ +++E+AK NA T G D S D++VSNPPYI L Sbjct: 144 DIAQESIEVAKENAKTLGAE--VKFYHGDLLSPFYETGQKLDIVVSNPPYIPEEDWRGLS 201 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-K 243 V++ +P+ +L GG DGL YR + + L K + + EIG Q DV + + Sbjct: 202 PVVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEIGVGQGEDVKGLLQQAFP 261 Query: 244 LFLVNAFKDYGGNDRVLLF 262 V D G DR++ Sbjct: 262 HAHVEVVFDINGKDRMVFA 280 >gi|78358025|ref|YP_389474.1| HemK family modification methylase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78220430|gb|ABB39779.1| [protein release factor]-glutamine N5-methyltransferase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 297 Score = 261 bits (668), Expect = 8e-68, Method: Composition-based stats. Identities = 78/265 (29%), Positives = 127/265 (47%), Gaps = 11/265 (4%) Query: 7 SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66 + L V Q++V +L +++ I+R + E + + G R+FY Sbjct: 35 AELLLAHVLRTDRLQLLVRRGHMLTEKEYAQAEKLILRRAEGEPVAYLTGSREFYGREFA 94 Query: 67 LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126 +S+DT PRP+TELL+D+ +R DLGTG+G + +++ E P G Sbjct: 95 VSTDTLIPRPDTELLIDT----LKKEYPPHAALRFADLGTGSGCIAVSVAAEMPSAHGTA 150 Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVDCLG 184 VDIS AL A+ NA + V++R +Q+D+ S + FDV++SNPPY+ + + L Sbjct: 151 VDISSGALHTARENAARHRVADRVAFVQADFTSPLFRPASFDVVLSNPPYVSATEYETLS 210 Query: 185 LEVRDFDPRISLDGG---IDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 EVR +P+ +L GL H + L GL +E G+ Q D++ + ++ Sbjct: 211 PEVRCHEPQRALVPDTPASTGLEHAAALLPLAFGWLKPGGLFLMEFGWKQGPDIMAMVKA 270 Query: 242 -RKLFLVNAF-KDYGGNDRVLLFCR 264 + V +D G DR L R Sbjct: 271 QHGQWTVAVILQDLAGRDRALYARR 295 >gi|88800297|ref|ZP_01115864.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Reinekea sp. MED297] gi|88777012|gb|EAR08220.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Reinekea sp. MED297] Length = 275 Score = 261 bits (667), Expect = 8e-68, Method: Composition-based stats. Identities = 77/262 (29%), Positives = 121/262 (46%), Gaps = 9/262 (3%) Query: 4 LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63 D L V + P+ L + Q + R L E + I+G R+F+++ Sbjct: 19 ALDVDVLLATVLEKPRSFLYAWPEHELSEAQHHRFQDGCQRRLSGEPVAYIVGEREFWSL 78 Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 L + T PRP+TE+LV+ LA + R +DLGTGTGA+ LAL E P ++ Sbjct: 79 PLKTAPHTLIPRPDTEVLVEQVLADA-----PDGEYRCVDLGTGTGAIALALKSERPKWQ 133 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDC 182 G+D +A+ +A NA G+ F +W + + + D++VSNPPYI++ Sbjct: 134 VEGIDRVPEAVALATENAQRLGLDVTFRV--GNWCADLADDSIDILVSNPPYIDADDEHL 191 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 +VR F+P +L GL+ I D R L G +E G+ Q V + + Sbjct: 192 SQGDVR-FEPESALVADQHGLADISIIVDQAQRCLRPGGGVFIEHGWQQGDAVRALLQDA 250 Query: 243 KLFLVNAFKDYGGNDRVLLFCR 264 V+ +DYG +RV + Sbjct: 251 GFLRVDTRRDYGNQERVTFGWK 272 >gi|325696482|gb|EGD38372.1| protein-(glutamine-N5) methyltransferase [Streptococcus sanguinis SK160] Length = 276 Score = 261 bits (667), Expect = 8e-68, Method: Composition-based stats. Identities = 83/262 (31%), Positives = 124/262 (47%), Gaps = 11/262 (4%) Query: 3 ALRDSHSF--LCRVTG-LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRD 59 A ++ S + R LS ++ + + R L + L H+ I+G D Sbjct: 17 AGEEAESLSFVYRALNKLSFTDFVLKLRTEVSQEDRKQLKAIQEQLLAHKPAQYIIGSSD 76 Query: 60 FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119 F + L + PRPETE LV+ L+ + + +LD+GTG+GA+ LAL Sbjct: 77 FLGLSLKVDERVLIPRPETEELVELILSEN-----PESSLSVLDIGTGSGAIALALANSR 131 Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179 P +K D+S AL +A NA +S +QSD F ++ G FD+IVSNPPYI Sbjct: 132 PDWKITASDLSNDALALAAENAQFCNLS--LTFVQSDCFEAISGSFDIIVSNPPYISEAD 189 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 D +GL V +P ++L DG + YR IA +L + G +EIGY Q V + Sbjct: 190 KDEVGLNVLTSEPHMALFAEEDGYAVYRKIAGQAEDYLTEKGKIYLEIGYKQGDGVAELL 249 Query: 240 ESR-KLFLVNAFKDYGGNDRVL 260 + + KD G DR++ Sbjct: 250 KQSFPHKRIRILKDQFGKDRMV 271 >gi|227890653|ref|ZP_04008458.1| peptide release factor-glutamine N5-methyltransferase [Lactobacillus salivarius ATCC 11741] gi|227867591|gb|EEJ75012.1| peptide release factor-glutamine N5-methyltransferase [Lactobacillus salivarius ATCC 11741] gi|300214392|gb|ADJ78808.1| Peptide release factor-glutamine N5-methyltransferase [Lactobacillus salivarius CECT 5713] Length = 279 Score = 261 bits (667), Expect = 8e-68, Method: Composition-based stats. Identities = 86/258 (33%), Positives = 131/258 (50%), Gaps = 7/258 (2%) Query: 4 LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63 L D +C G + Q++++ + +DD+ L I + + ++G++DFY + Sbjct: 24 LEDVDYLICGQMGWNKTQLLMNYRTRIDDKNYQELQEKIELYNQDYPLQYLIGYQDFYGL 83 Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 RL ++ DT PRPETE LVD L + K + +LD+GTGTGA+ LAL + Sbjct: 84 RLKVTKDTLIPRPETEELVDWILNDN----SKNENYDVLDVGTGTGAIGLALKSIRSNWN 139 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183 DIS AL++AK NA + F T SD F +EG D+IVSNPPYI + Sbjct: 140 IFLSDISEPALKVAKENAQNLNLDVSFST--SDLFEKIEGKKDIIVSNPPYISENEKIYM 197 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR- 242 V +++P +L +GL Y IA+ + L + +EIG+ Q V +IF+ Sbjct: 198 DKSVLNYEPHQALFAKNNGLEIYERIANESGKLLKQGSKIYMEIGFLQGKAVKKIFKDSF 257 Query: 243 KLFLVNAFKDYGGNDRVL 260 + KD GNDR++ Sbjct: 258 PNSEITLKKDINGNDRMI 275 >gi|332202883|gb|EGJ16951.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptococcus pneumoniae GA47901] Length = 279 Score = 261 bits (667), Expect = 8e-68, Method: Composition-based stats. Identities = 79/248 (31%), Positives = 119/248 (47%), Gaps = 9/248 (3%) Query: 16 GLSSHQVIVDPDSVLD-DRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEP 74 LS I + + ++ F+ N + H+ I+G DFY + L + P Sbjct: 33 NLSFTDFIFALQQEVTTEEEKQFVENIYQQLAAHKPAQYIIGQADFYGMHLKVDERVLIP 92 Query: 75 RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134 RPETE LV+ L +L + +LD+GTG+GA+ LAL K P + D+S +AL Sbjct: 93 RPETEELVELILTENLET-----NLSVLDIGTGSGAIALALAKNRPDWSVTAADVSQEAL 147 Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194 E+A NA + +SD F+ + +D+IVSNPPYI +GL V +P + Sbjct: 148 ELASENASDQNL--NIFFKKSDCFAEISEKYDIIVSNPPYISREDESEVGLNVLHSEPHL 205 Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDY 253 +L DGL+ Y IA+ +L G +EIGY Q V +F V KD Sbjct: 206 ALFADEDGLAIYCRIAEDAKDYLKDGGKIYLEIGYKQGQSVPELFRKHLPEKKVRTLKDQ 265 Query: 254 GGNDRVLL 261 G +R+++ Sbjct: 266 FGQNRMVV 273 >gi|229176004|ref|ZP_04303500.1| Protein hemK [Bacillus cereus MM3] gi|228607497|gb|EEK64823.1| Protein hemK [Bacillus cereus MM3] Length = 283 Score = 261 bits (667), Expect = 8e-68, Method: Composition-based stats. Identities = 71/259 (27%), Positives = 114/259 (44%), Gaps = 7/259 (2%) Query: 8 HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67 LC V + ++++ + Q T I + ++ I ++G+ FY + Sbjct: 25 ELVLCHVLKTNRTGMLMNMREEITVEQETSFTEFIHKHVEGIPIQYMIGYEMFYGRSFFV 84 Query: 68 SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 + + PRPETE L+ L + + + D+GTG+GA+ + L E+ V Sbjct: 85 NEEVLIPRPETEELIVGVLERIERHF-GDEKLHVADIGTGSGAISITLALENKNLHVYTV 143 Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIVDCLG 184 DI+ +++E+AK NA T G D S DV+VSNPPYI L Sbjct: 144 DIAQESIEVAKENAKTLGAE--VTFYHGDLLSPFYKTSQKLDVVVSNPPYIPEEDWRGLS 201 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-K 243 V++ +P+ +L GG DGL YR + + L K + + EIG Q DV + + Sbjct: 202 PVVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEIGVGQGEDVKGLLQQAFP 261 Query: 244 LFLVNAFKDYGGNDRVLLF 262 V D G DR++ Sbjct: 262 HAHVEVVFDINGKDRMVFA 280 >gi|94312134|ref|YP_585344.1| HemK family modification methylase [Cupriavidus metallidurans CH34] gi|93355986|gb|ABF10075.1| N5-glutamine methyltransferase, modifies release factors RF-1 and RF-2 [Cupriavidus metallidurans CH34] Length = 310 Score = 261 bits (667), Expect = 8e-68, Method: Composition-based stats. Identities = 77/259 (29%), Positives = 120/259 (46%), Gaps = 8/259 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 + ++ L VTG + Q+I + LD +R + R L E + ++G R+F+ Sbjct: 51 PVLEARMLLSHVTGFTRTQLITRDNDHLDAPKRDAFATLLARRLTGEPMAYLIGEREFFG 110 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 ++ D PRP+T + A SL RI R+LD+GTG+G + + + +E P Sbjct: 111 RTFRVTPDVLIPRPDT----EVAAEASLARIADVKAPRVLDMGTGSGILAVTIARERPDA 166 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIV 180 + DIS AL +A+ NA +E L SDW+ + F++IVSNPPYI Sbjct: 167 EVWATDISRGALMVAEDNARALQ-AENIRFLVSDWYEDLPVGLCFNLIVSNPPYIAEGDP 225 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 + ++R F+P +L DGLS TI G + L G +E GY+Q + Sbjct: 226 HLVEGDLR-FEPIDALTDHEDGLSDLATIVAGATARLLPGGWLLMEHGYDQGAAMRAQLA 284 Query: 241 SRKLFLVNAFKDYGGNDRV 259 V +D G +R Sbjct: 285 EAGFVEVFTTRDLAGLERC 303 >gi|149019617|ref|ZP_01834936.1| HemK protein [Streptococcus pneumoniae SP23-BS72] gi|147930992|gb|EDK81972.1| HemK protein [Streptococcus pneumoniae SP23-BS72] Length = 279 Score = 261 bits (667), Expect = 8e-68, Method: Composition-based stats. Identities = 77/248 (31%), Positives = 120/248 (48%), Gaps = 9/248 (3%) Query: 16 GLSSHQVIVDPDSVLD-DRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEP 74 LS I + + ++ F+ + + H+ I+G DFY + L + P Sbjct: 33 NLSFTDFIFALQQEVTTEEEKQFVEDIYQQLAAHKPAQYIIGQADFYGMHLKVDERVLIP 92 Query: 75 RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134 RPETE LV+ L +L + +LD+GTG+GA+ LAL K P + D+S +AL Sbjct: 93 RPETEELVELILTENLET-----NLSVLDIGTGSGAIALALAKNRPDWSVTAADVSQEAL 147 Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194 ++A NA + + +SD F+ + +D+IVSNPPYI +GL V +P + Sbjct: 148 DLASENAKNQNL--QIFFKKSDCFTEISEKYDIIVSNPPYISREDESEVGLNVLYSEPHL 205 Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDY 253 +L DGL+ Y IA+ +L G +EIGY Q V +F V KD Sbjct: 206 ALFADEDGLAIYCRIAEDAKDYLKDGGKIYLEIGYKQGQSVPELFRKHLPEKRVRTLKDQ 265 Query: 254 GGNDRVLL 261 G +R+++ Sbjct: 266 FGQNRMVV 273 >gi|168483092|ref|ZP_02708044.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptococcus pneumoniae CDC1873-00] gi|182683969|ref|YP_001835716.1| hemK protein [Streptococcus pneumoniae CGSP14] gi|172043511|gb|EDT51557.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptococcus pneumoniae CDC1873-00] gi|182629303|gb|ACB90251.1| hemK protein [Streptococcus pneumoniae CGSP14] Length = 279 Score = 261 bits (667), Expect = 9e-68, Method: Composition-based stats. Identities = 78/248 (31%), Positives = 119/248 (47%), Gaps = 9/248 (3%) Query: 16 GLSSHQVIVDPDSVLD-DRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEP 74 LS I + + ++ F+ + + H+ I+G DFY + L + P Sbjct: 33 NLSFTDFIFALQQEVTTEEEKQFVEDIYQQLAAHKPAQYIIGQADFYGMHLKVDERVLIP 92 Query: 75 RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134 RPETE LV+ L +L + +LD+GTG+GA+ LAL K P + D+S +AL Sbjct: 93 RPETEELVELILTENLET-----NLSVLDIGTGSGAIALALAKNRPDWSVTAADVSQEAL 147 Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194 E+A NA + +SD F+ + +D+IVSNPPYI +GL V +P + Sbjct: 148 ELASENASNQNL--NIFFKKSDCFAEISEKYDIIVSNPPYISREDESEVGLNVLHSEPHL 205 Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDY 253 +L DGL+ Y IA+ +L G +EIGY Q V +F V KD Sbjct: 206 ALFADEDGLAIYCRIAEDAKDYLKDGGKIYLEIGYKQGQSVPELFRKHLPEKRVRTLKDQ 265 Query: 254 GGNDRVLL 261 G +R+++ Sbjct: 266 FGQNRMVV 273 >gi|30265351|ref|NP_847728.1| HemK family modification methylase [Bacillus anthracis str. Ames] gi|47530890|ref|YP_022239.1| HemK family modification methylase [Bacillus anthracis str. 'Ames Ancestor'] gi|49188163|ref|YP_031416.1| HemK family modification methylase [Bacillus anthracis str. Sterne] gi|165871296|ref|ZP_02215945.1| modification methylase, HemK family [Bacillus anthracis str. A0488] gi|167636691|ref|ZP_02394979.1| modification methylase, HemK family [Bacillus anthracis str. A0442] gi|170688140|ref|ZP_02879351.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacillus anthracis str. A0465] gi|170709377|ref|ZP_02899790.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacillus anthracis str. A0389] gi|177651883|ref|ZP_02934466.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacillus anthracis str. A0174] gi|196042385|ref|ZP_03109650.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacillus cereus NVH0597-99] gi|227818091|ref|YP_002818100.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacillus anthracis str. CDC 684] gi|228930336|ref|ZP_04093340.1| Protein hemK [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228936613|ref|ZP_04099407.1| Protein hemK [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|229094440|ref|ZP_04225512.1| Protein hemK [Bacillus cereus Rock3-42] gi|229602075|ref|YP_002869543.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacillus anthracis str. A0248] gi|254686249|ref|ZP_05150108.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacillus anthracis str. CNEVA-9066] gi|254724244|ref|ZP_05186028.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacillus anthracis str. A1055] gi|254735256|ref|ZP_05192965.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacillus anthracis str. Western North America USA6153] gi|254744459|ref|ZP_05202139.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacillus anthracis str. Kruger B] gi|254755797|ref|ZP_05207829.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacillus anthracis str. Vollum] gi|254762137|ref|ZP_05213983.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacillus anthracis str. Australia 94] gi|301056796|ref|YP_003795007.1| HemK family modification methylase [Bacillus anthracis CI] gi|30260029|gb|AAP29214.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacillus anthracis str. Ames] gi|47506038|gb|AAT34714.1| modification methylase, HemK family [Bacillus anthracis str. 'Ames Ancestor'] gi|49182090|gb|AAT57466.1| modification methylase, HemK family [Bacillus anthracis str. Sterne] gi|164712963|gb|EDR18491.1| modification methylase, HemK family [Bacillus anthracis str. A0488] gi|167527891|gb|EDR90713.1| modification methylase, HemK family [Bacillus anthracis str. A0442] gi|170125725|gb|EDS94639.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacillus anthracis str. A0389] gi|170667833|gb|EDT18585.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacillus anthracis str. A0465] gi|172082587|gb|EDT67651.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacillus anthracis str. A0174] gi|196026777|gb|EDX65419.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacillus cereus NVH0597-99] gi|227005279|gb|ACP15022.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacillus anthracis str. CDC 684] gi|228688977|gb|EEL42804.1| Protein hemK [Bacillus cereus Rock3-42] gi|228823048|gb|EEM68886.1| Protein hemK [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228829322|gb|EEM74955.1| Protein hemK [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|229266483|gb|ACQ48120.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacillus anthracis str. A0248] gi|300378965|gb|ADK07869.1| modification methylase, HemK family [Bacillus cereus biovar anthracis str. CI] Length = 283 Score = 261 bits (667), Expect = 9e-68, Method: Composition-based stats. Identities = 71/259 (27%), Positives = 113/259 (43%), Gaps = 7/259 (2%) Query: 8 HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67 LC V + ++++ + Q T I + ++ I ++G FY + Sbjct: 25 EIVLCHVLKTNRTGLLMNMREEITAEQETSFTEFIHKHVEGIPIQYMIGHEMFYGRSFFV 84 Query: 68 SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 + + PRPETE L+ L + + + D+GTG+GA+ + L E+ V Sbjct: 85 NEEVLIPRPETEELIVGVLERIERHF-GDEKLHVADIGTGSGAISITLALENKNLHVYTV 143 Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVIVDCLG 184 DI+ +++E+AK NA T G D S DV+VSNPPYI L Sbjct: 144 DIAQESIEVAKENAKTLGAE--VTFYHGDLLSPFYETGQKLDVVVSNPPYIPEEDWRGLS 201 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-K 243 V++ +P+ +L GG DGL YR + + L K + + EIG Q DV + + Sbjct: 202 PVVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEIGVGQGEDVKGLLQQAFP 261 Query: 244 LFLVNAFKDYGGNDRVLLF 262 V D G DR++ Sbjct: 262 HAHVEVVFDINGKDRMVFA 280 >gi|266621434|ref|ZP_06114369.1| protein-(glutamine-N5) methyltransferase [Clostridium hathewayi DSM 13479] gi|288866873|gb|EFC99171.1| protein-(glutamine-N5) methyltransferase [Clostridium hathewayi DSM 13479] Length = 326 Score = 261 bits (667), Expect = 9e-68, Method: Composition-based stats. Identities = 80/303 (26%), Positives = 125/303 (41%), Gaps = 49/303 (16%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQ-----RFFLTNAIVRSLKHESIHRILG 56 +A D+ L ++ + + D I + + + +I G Sbjct: 23 EAELDAKYLLFEAFQTDMVHFLMHRNEEVKDEDSVKRTVADYRRMIEKRSERIPLQQITG 82 Query: 57 WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116 R+F + +++ PR +TE LV+ L + +LDL TG+G + ++L Sbjct: 83 SREFMGLEFSVNEYVLIPRQDTETLVEQVLKDF-----QGKNPEVLDLCTGSGCIGISLS 137 Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVS----------------------------- 147 + + DIS KAL +AK NA + Sbjct: 138 ILGGWQEVTLADISLKALLVAKKNAEDLMTAKLHPIRLSSEGQKESPWRWRLTSELPGME 197 Query: 148 ------ERFDTLQSDWFSSVEG----LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197 + ++SD FSS+ G FDVIVSNPPYI + +++ L EVRD +PR++LD Sbjct: 198 DKTAGVQNITLVESDLFSSLSGDGKRKFDVIVSNPPYIPTNVIEELEPEVRDHEPRLALD 257 Query: 198 GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGND 257 G DGL YR +A +L G EIGY+Q V + V ++D G D Sbjct: 258 GMEDGLYFYRRLAAECGSYLKPGGTVYFEIGYDQGQAVSGLLREAGFQNVLVYQDAPGLD 317 Query: 258 RVL 260 RV+ Sbjct: 318 RVV 320 >gi|218906506|ref|YP_002454340.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacillus cereus AH820] gi|229124832|ref|ZP_04254010.1| Protein hemK [Bacillus cereus 95/8201] gi|218534962|gb|ACK87360.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacillus cereus AH820] gi|228658623|gb|EEL14285.1| Protein hemK [Bacillus cereus 95/8201] Length = 283 Score = 261 bits (667), Expect = 9e-68, Method: Composition-based stats. Identities = 72/259 (27%), Positives = 113/259 (43%), Gaps = 7/259 (2%) Query: 8 HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67 LC V + ++++ + Q T I + +K I ++G FY + Sbjct: 25 EIVLCHVLKTNRTGLLMNMREEITAEQETSFTEFIHKHVKGIPIQYMIGHEMFYGRSFFV 84 Query: 68 SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 + + PRPETE L+ L + + + D+GTG+GA+ + L E+ V Sbjct: 85 NEEVLIPRPETEELIVGVLERIERHF-GDEKLHVADIGTGSGAISITLALENKNLYVYTV 143 Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVIVDCLG 184 DI+ +++E+AK NA T G D S DV+VSNPPYI L Sbjct: 144 DIAQESIEVAKENAKTLGAE--VTFYHGDLLSPFYETGQKLDVVVSNPPYIPEEDWRGLS 201 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-K 243 V++ +P+ +L GG DGL YR + + L K + + EIG Q DV + + Sbjct: 202 PVVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEIGVGQGEDVKGLLQQAFP 261 Query: 244 LFLVNAFKDYGGNDRVLLF 262 V D G DR++ Sbjct: 262 HAHVEVVFDINGKDRMVFA 280 >gi|167564256|ref|ZP_02357172.1| protein hemK [Burkholderia oklahomensis EO147] Length = 288 Score = 261 bits (667), Expect = 9e-68, Method: Composition-based stats. Identities = 80/261 (30%), Positives = 121/261 (46%), Gaps = 11/261 (4%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L G + Q+I D LD R E + ++ G R+F+ + Sbjct: 27 DARILLAHALGWTRTQLITRADEPLDAAAVERYLALEARRAAGEPVAQLTGAREFFGLEF 86 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 ++ D PRPETELLV++AL I+ +LDLGTG+GA+ +++ E P + Sbjct: 87 EITPDVLIPRPETELLVETALD----AIDGIASPCVLDLGTGSGAIAVSIASERPDARVW 142 Query: 126 GVDISCKALEIAKSNAVTNGVSER----FDTLQSDWFSSVE--GLFDVIVSNPPYIESVI 179 +D S AL++A+ NA R L+SDW+++++ F VIVSNPPYI Sbjct: 143 ALDRSAAALDVARRNARKLLAPARPGGPLQFLESDWYAALDSGRRFHVIVSNPPYIARHD 202 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 ++R F+PR +L DGL+ R I G L G +E GY+Q V Sbjct: 203 PHLAEGDLR-FEPRGALTDDDDGLAAIRAIVAGAHAFLAPGGALWIEHGYDQAAAVRARL 261 Query: 240 ESRKLFLVNAFKDYGGNDRVL 260 E+ V + D +R Sbjct: 262 EAAGFADVESLADLASIERAT 282 >gi|70732475|ref|YP_262237.1| hemK protein [Pseudomonas fluorescens Pf-5] gi|68346774|gb|AAY94380.1| hemK protein [Pseudomonas fluorescens Pf-5] Length = 276 Score = 261 bits (667), Expect = 9e-68, Method: Composition-based stats. Identities = 78/250 (31%), Positives = 122/250 (48%), Gaps = 8/250 (3%) Query: 16 GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75 G + P+ ++ T+ + R E + ILG + F+ + L ++ T PR Sbjct: 32 GKPRSFLHTWPERIVPSEAALVFTDYLQRRRSGEPVAYILGQQGFWKLDLEVAPHTLIPR 91 Query: 76 PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135 P+TE L + + +LDLGTG+GA+ LAL E P ++ VD +A+ Sbjct: 92 PDTE-----LLVEAALELLPATPATVLDLGTGSGAIALALASERPAWQVTAVDRVLEAVA 146 Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194 +A+ N + + L S WFSS+E FD+I+SNPPYI + +VR F+P Sbjct: 147 LAERNRQRLQL-DNVSVLSSHWFSSIESRRFDLIISNPPYIAEADPHLVAGDVR-FEPES 204 Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYG 254 +L G DGL R I +HL G +E GY+Q V + ++ V++ D G Sbjct: 205 ALVAGKDGLDDLRLIVTQAPQHLEAGGWLMLEHGYDQAAAVRELLAAQGFIEVHSRVDLG 264 Query: 255 GNDRVLLFCR 264 G++R+ L CR Sbjct: 265 GHERISLGCR 274 >gi|225867309|ref|YP_002752687.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacillus cereus 03BB102] gi|225789080|gb|ACO29297.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacillus cereus 03BB102] Length = 283 Score = 261 bits (667), Expect = 9e-68, Method: Composition-based stats. Identities = 71/259 (27%), Positives = 114/259 (44%), Gaps = 7/259 (2%) Query: 8 HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67 LC V + ++++ + Q T +I + ++ I ++G FY + Sbjct: 25 EIVLCHVLKTNRTGLLMNMREEITAEQETSFTESIHKHVEGIPIQYMIGHEMFYGRSFFV 84 Query: 68 SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 + + PRPETE L+ L + + + D+GTG+GA+ + L E+ V Sbjct: 85 NEEVLIPRPETEELIVGVLERIERHF-GDEKLHVADIGTGSGAISITLALENKNLHVYTV 143 Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVIVDCLG 184 DI+ +++E+AK NA T G D S DV+VSNPPYI L Sbjct: 144 DIAQESIEVAKENAKTLGAE--VTFYHGDLLSPFYETGQKLDVVVSNPPYIPEEDWRGLS 201 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-K 243 V++ +P+ +L GG DGL YR + + L K + + EIG Q DV + + Sbjct: 202 PVVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEIGVGQGEDVKGLLQQAFP 261 Query: 244 LFLVNAFKDYGGNDRVLLF 262 V D G DR++ Sbjct: 262 HAHVEVVFDINGKDRMVFA 280 >gi|52140234|ref|YP_086597.1| HemK family modification methylase [Bacillus cereus E33L] gi|51973703|gb|AAU15253.1| modification methylase, HemK family [Bacillus cereus E33L] Length = 283 Score = 261 bits (667), Expect = 1e-67, Method: Composition-based stats. Identities = 71/259 (27%), Positives = 114/259 (44%), Gaps = 7/259 (2%) Query: 8 HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67 LC V + ++++ + Q T I + ++ I ++G FY + Sbjct: 25 EIVLCHVLKTNRTGLLMNMREEITVEQETSFTEFIHKHVEGIPIQYMIGHEMFYGRSFFV 84 Query: 68 SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 + + PRPETE L+ L + + + D+GTG+GA+ + L E+ V Sbjct: 85 NEEVLIPRPETEELIVGVLERIERHF-GDEKLHVADIGTGSGAISITLALENKNLHVYTV 143 Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVIVDCLG 184 DI+ +++E+AK NA T G D S DV+VSNPPYI L Sbjct: 144 DIAQESIEVAKENAKTLGAE--VTFYHGDLLSPFYETGQKLDVVVSNPPYIPEEDWRGLS 201 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-K 243 V++ +P+ +L GG DGL YR + + + L K + + EIG Q DV + + Sbjct: 202 PVVKEHEPKRALVGGEDGLDFYRRFMEELPKVLQKKAIVAFEIGVGQGEDVKGLLQKAFP 261 Query: 244 LFLVNAFKDYGGNDRVLLF 262 V D G DR++ Sbjct: 262 HAHVEVVFDINGKDRMVFA 280 >gi|229020547|ref|ZP_04177292.1| Protein hemK [Bacillus cereus AH1273] gi|229026768|ref|ZP_04183100.1| Protein hemK [Bacillus cereus AH1272] gi|228734491|gb|EEL85153.1| Protein hemK [Bacillus cereus AH1272] gi|228740767|gb|EEL91020.1| Protein hemK [Bacillus cereus AH1273] Length = 283 Score = 261 bits (667), Expect = 1e-67, Method: Composition-based stats. Identities = 70/259 (27%), Positives = 113/259 (43%), Gaps = 7/259 (2%) Query: 8 HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67 LC V + ++++ + Q T I + ++ I ++G+ FY + Sbjct: 25 ELVLCHVLKTNRTGMLMNMREEITAEQETSFTEFIHKHVEGIPIQYMMGYEIFYGRSFFV 84 Query: 68 SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 + + PRPETE L+ L + + + D+GTG+GA+ + L E+ V Sbjct: 85 NEEVLIPRPETEELIVGVLERIERHFGNEE-LHVADIGTGSGAISITLALENKNLHVYTV 143 Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVIVDCLG 184 DI+ +++E+AK NA G D S DV+VSNPPYI L Sbjct: 144 DIAQESIEVAKENAKALGAE--VTFYHGDLLSPFYETGQKLDVVVSNPPYIPEEDWRGLS 201 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-K 243 V++ +P+ +L GG DGL YR + + L K + + EIG Q DV + + Sbjct: 202 TVVKEHEPKRALVGGEDGLDFYRRFMEELPNVLKKKAIVAFEIGVGQGEDVKALLQQTFP 261 Query: 244 LFLVNAFKDYGGNDRVLLF 262 V D G DR++ Sbjct: 262 HAHVEVVFDINGKDRMVFA 280 >gi|148994242|ref|ZP_01823535.1| serine hydroxymethyltransferase [Streptococcus pneumoniae SP9-BS68] gi|148998843|ref|ZP_01826279.1| HemK protein [Streptococcus pneumoniae SP11-BS70] gi|168488842|ref|ZP_02713041.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptococcus pneumoniae SP195] gi|168494450|ref|ZP_02718593.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptococcus pneumoniae CDC3059-06] gi|221231774|ref|YP_002510926.1| methyltransferase [Streptococcus pneumoniae ATCC 700669] gi|225854522|ref|YP_002736034.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptococcus pneumoniae JJA] gi|225861004|ref|YP_002742513.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptococcus pneumoniae Taiwan19F-14] gi|298230459|ref|ZP_06964140.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptococcus pneumoniae str. Canada MDR_19F] gi|298255329|ref|ZP_06978915.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptococcus pneumoniae str. Canada MDR_19A] gi|298502959|ref|YP_003724899.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Streptococcus pneumoniae TCH8431/19A] gi|307067802|ref|YP_003876768.1| methylase of polypeptide chain release factors [Streptococcus pneumoniae AP200] gi|147755270|gb|EDK62321.1| HemK protein [Streptococcus pneumoniae SP11-BS70] gi|147927383|gb|EDK78414.1| serine hydroxymethyltransferase [Streptococcus pneumoniae SP9-BS68] gi|183572386|gb|EDT92914.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptococcus pneumoniae SP195] gi|183575598|gb|EDT96126.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptococcus pneumoniae CDC3059-06] gi|220674234|emb|CAR68769.1| putative methyltransferase [Streptococcus pneumoniae ATCC 700669] gi|225724246|gb|ACO20099.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptococcus pneumoniae JJA] gi|225727908|gb|ACO23759.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptococcus pneumoniae Taiwan19F-14] gi|298238554|gb|ADI69685.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Streptococcus pneumoniae TCH8431/19A] gi|301794157|emb|CBW36567.1| putative methyltransferase [Streptococcus pneumoniae INV104] gi|306409339|gb|ADM84766.1| Methylase of polypeptide chain release factors [Streptococcus pneumoniae AP200] gi|327389395|gb|EGE87740.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptococcus pneumoniae GA04375] gi|332073353|gb|EGI83832.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptococcus pneumoniae GA17570] gi|332075369|gb|EGI85838.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptococcus pneumoniae GA41301] gi|332201492|gb|EGJ15562.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptococcus pneumoniae GA47368] Length = 279 Score = 261 bits (667), Expect = 1e-67, Method: Composition-based stats. Identities = 78/248 (31%), Positives = 119/248 (47%), Gaps = 9/248 (3%) Query: 16 GLSSHQVIVDPDSVLD-DRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEP 74 LS I + + ++ F+ + + H+ I+G DFY + L + P Sbjct: 33 NLSFTDFIFALQQEVTTEEEKQFVEDIYQQLAAHKPAQYIIGQADFYGMHLKVDERVLIP 92 Query: 75 RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134 RPETE LV+ L +L + +LD+GTG+GA+ LAL K P + D+S +AL Sbjct: 93 RPETEELVELILTENLET-----NLSVLDIGTGSGAIALALAKNRPDWSVTAADVSQEAL 147 Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194 E+A NA + +SD F+ + +D+IVSNPPYI +GL V +P + Sbjct: 148 ELASENASDQNL--NIFFKKSDCFAEISEKYDIIVSNPPYISREDESEVGLNVLHSEPHL 205 Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDY 253 +L DGL+ Y IA+ +L G +EIGY Q V +F V KD Sbjct: 206 ALFADEDGLAIYCRIAEDAKDYLKDGGKIYLEIGYKQGQSVPELFRKHLPEKKVRTLKDQ 265 Query: 254 GGNDRVLL 261 G +R+++ Sbjct: 266 FGQNRMVV 273 >gi|209516554|ref|ZP_03265408.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Burkholderia sp. H160] gi|209502995|gb|EEA02997.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Burkholderia sp. H160] Length = 295 Score = 261 bits (667), Expect = 1e-67, Method: Composition-based stats. Identities = 86/261 (32%), Positives = 126/261 (48%), Gaps = 11/261 (4%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 ++ L V G Q+I + L R + E + +++G R+F+ + Sbjct: 30 LEARILLTHVLGWRRTQLITRGEEPLLLADVERYRALEARRVAGEPVAQLVGAREFFGLE 89 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 ++ PRPETELLV++ALA IE R R+LDLGTGTGA+ +A+ P + Sbjct: 90 FEVTPHVLIPRPETELLVETALA----AIEHRSRPRVLDLGTGTGAIAVAIASMRPDAQV 145 Query: 125 VGVDISCKALEIAKSNAVTNGVSER----FDTLQSDWFSSVEG--LFDVIVSNPPYIESV 178 +D S AL +A N ++R L SDW+ S++ FD IVSNPPYI S Sbjct: 146 WALDRSADALVVAARNGARLLDAKRPGGAVAFLHSDWYGSLDAALRFDAIVSNPPYIASG 205 Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238 ++R F+PR +L DGLS R I G L DG +E GY+Q V + Sbjct: 206 DPHLSEGDLR-FEPRSALTDEADGLSAIRAIVAGAPERLATDGALWIEHGYDQAEAVRAL 264 Query: 239 FESRKLFLVNAFKDYGGNDRV 259 +R V + +D G +R+ Sbjct: 265 LSARGFAEVRSERDLAGIERI 285 >gi|42784500|ref|NP_981747.1| HemK family modification methylase [Bacillus cereus ATCC 10987] gi|42740432|gb|AAS44355.1| modification methylase, HemK family [Bacillus cereus ATCC 10987] Length = 283 Score = 260 bits (666), Expect = 1e-67, Method: Composition-based stats. Identities = 70/259 (27%), Positives = 113/259 (43%), Gaps = 7/259 (2%) Query: 8 HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67 LC V + ++++ + Q T I + ++ I ++G FY + Sbjct: 25 EIVLCHVLKTNRTGILMNMREEITAEQEKSFTEFIHKHVEGIPIQYMIGHEMFYGRSFFV 84 Query: 68 SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 + + PRPETE L+ L + + + D+GTG+GA+ + L E+ V Sbjct: 85 NEEVLIPRPETEELIVGVLERIERHF-GDEKLHVADIGTGSGAISITLALENKNLHVYTV 143 Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVIVDCLG 184 DI+ +++E+A+ NA T G D S DV+VSNPPYI L Sbjct: 144 DIAQESIEVAQENAKTLGAE--VTFYHGDLLSPFYETGQKLDVVVSNPPYIPEEDWRGLS 201 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-K 243 V++ +P+ +L GG DGL YR + + L K + + EIG Q DV + + Sbjct: 202 PVVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEIGVGQGEDVKGLLQQAFP 261 Query: 244 LFLVNAFKDYGGNDRVLLF 262 V D G DR++ Sbjct: 262 HAHVEVVFDINGKDRMVFA 280 >gi|327460377|gb|EGF06714.1| protein-(glutamine-N5) methyltransferase [Streptococcus sanguinis SK1057] Length = 276 Score = 260 bits (666), Expect = 1e-67, Method: Composition-based stats. Identities = 82/262 (31%), Positives = 124/262 (47%), Gaps = 11/262 (4%) Query: 3 ALRDSHSF--LCRVTG-LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRD 59 A ++ S + + LS ++ + + R L + L H+ I+G D Sbjct: 17 AGEEAESLSFVYQALNKLSFTDFVLKLRTEVSQEDRKQLKAIQEQLLAHKPAQYIIGSSD 76 Query: 60 FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119 F + L + PRPETE LV+ L+ + + +LD+GTG+GA+ LAL Sbjct: 77 FLGLSLKVDERVLIPRPETEELVELILSEN-----PESSLSVLDIGTGSGAIALALANSR 131 Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179 P +K D+S AL +A NA +S +QSD F ++ G FD+IVSNPPYI Sbjct: 132 PDWKITASDLSNDALALAAENAQFCNLS--LTFVQSDCFEAISGSFDIIVSNPPYISEAD 189 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 D +GL V +P ++L DG + YR IA +L + G +EIGY Q V + Sbjct: 190 KDEVGLNVLTSEPHMALFAEEDGYAVYRKIAGQAEDYLTEKGKIYLEIGYKQGDGVAELL 249 Query: 240 ESR-KLFLVNAFKDYGGNDRVL 260 + + KD G DR++ Sbjct: 250 KQSFPHKRIRILKDQFGKDRMV 271 >gi|187930215|ref|YP_001900702.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Ralstonia pickettii 12J] gi|187727105|gb|ACD28270.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Ralstonia pickettii 12J] Length = 300 Score = 260 bits (666), Expect = 1e-67, Method: Composition-based stats. Identities = 78/262 (29%), Positives = 118/262 (45%), Gaps = 11/262 (4%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 ++ + VTGLS Q+I +D R ++ R L E + +LG R+F+ Sbjct: 28 PALEARMLVSHVTGLSRVQLITQDTCAIDVAARARISELAARRLAGEPMAYLLGEREFFG 87 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 ++ PRP+TELLV+ AL +E+ D +LD+GTG+G + + + Sbjct: 88 RTFKVTPAVLIPRPDTELLVEQALD----HLEECDAPAVLDMGTGSGIIAITIALARRDA 143 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-----FDVIVSNPPYIES 177 + D S AL +A NA G + T DW+ ++ G FD+I SNPPYI + Sbjct: 144 RVWATDASADALAVAIDNAKALGAT-NVQTALGDWYGALAGTDAPPAFDLIASNPPYIAA 202 Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237 ++R F+P +L DGL H +I G L G VE GY+Q V Sbjct: 203 TDAHLDQGDLR-FEPASALTDHDDGLRHLCSIVAGAPARLVSGGWLLVEHGYDQGEPVRA 261 Query: 238 IFESRKLFLVNAFKDYGGNDRV 259 + V +D G+DR Sbjct: 262 LLGGAGFANVFTAQDLAGHDRC 283 >gi|228477567|ref|ZP_04062200.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptococcus salivarius SK126] gi|228250711|gb|EEK09909.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptococcus salivarius SK126] Length = 277 Score = 260 bits (666), Expect = 1e-67, Method: Composition-based stats. Identities = 78/247 (31%), Positives = 126/247 (51%), Gaps = 8/247 (3%) Query: 17 LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRP 76 ++ + + L +A + KH+ ILG+ DF+ +R + PRP Sbjct: 34 WDLTHFVLQLRQEVSEEDAELLAHAFSQLKKHKPAQYILGYEDFHGLRFQVDERVLIPRP 93 Query: 77 ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136 ETE LVD LA + +++LD+GTG+GA+ ++L K P ++ D+S A+E+ Sbjct: 94 ETEELVDLILAEN-----PSTELKVLDIGTGSGAISVSLKKSRPLWQVTASDLSVDAIEL 148 Query: 137 AKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL 196 A+ NA N V+ +QSD F ++ G FD+IVSNPPYI + +G+ V +P+++L Sbjct: 149 AQENAKLNQVA--ISFVQSDVFENISGSFDIIVSNPPYISENDKNEVGINVLASEPKMAL 206 Query: 197 DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDYGG 255 +GL+ YR I + ++L G EIGY Q D+ + V KD G Sbjct: 207 FADEEGLAIYRQIIEEADKYLTPSGKLYFEIGYKQGQDLKGLLSLHFPDKRVRVLKDQFG 266 Query: 256 NDRVLLF 262 DR+++ Sbjct: 267 QDRMVVM 273 >gi|171911848|ref|ZP_02927318.1| modification methylase, HemK family protein [Verrucomicrobium spinosum DSM 4136] Length = 307 Score = 260 bits (666), Expect = 1e-67, Method: Composition-based stats. Identities = 77/261 (29%), Positives = 126/261 (48%), Gaps = 4/261 (1%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 A + L V G + + D L + + L + R + E + +LG +F+ Sbjct: 22 DARLNMEHLLAHVLGCRRLDLYLRFDQTLAEPELQPLRVLLKRRGEGEPLQHLLGTVEFH 81 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 + PRPETE LV + P+ E R+LD+GTG+G + L+L K P Sbjct: 82 DSEFVCDHRALIPRPETEHLVHLLVDKWFPKSE--PPHRLLDVGTGSGCIGLSLAKAWPA 139 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSER-FDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180 + + VDIS ALE+A+ NA G++ + ++SD +G FD+IV+N PYI + + Sbjct: 140 AEVLLVDISEDALELARLNAGRLGLNGQKVRLVRSDLLEHADGAFDLIVANLPYIPTAEL 199 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 + EV DP ++LDGG DGL + + HL ++GL ++E+ Y+Q V + Sbjct: 200 KEISREVA-HDPNLALDGGPDGLVIVDRLLETAPEHLTENGLLALELHYDQASAVSERLQ 258 Query: 241 SRKLFLVNAFKDYGGNDRVLL 261 + + +D G R + Sbjct: 259 KLGFQAIQSAEDLAGIPRFVF 279 >gi|149012960|ref|ZP_01833849.1| HemK protein [Streptococcus pneumoniae SP19-BS75] gi|303255577|ref|ZP_07341628.1| hemK protein [Streptococcus pneumoniae BS455] gi|303260465|ref|ZP_07346433.1| hemK protein [Streptococcus pneumoniae SP-BS293] gi|303262822|ref|ZP_07348759.1| hemK protein [Streptococcus pneumoniae SP14-BS292] gi|303265292|ref|ZP_07351202.1| hemK protein [Streptococcus pneumoniae BS397] gi|303266499|ref|ZP_07352386.1| hemK protein [Streptococcus pneumoniae BS457] gi|303268382|ref|ZP_07354178.1| hemK protein [Streptococcus pneumoniae BS458] gi|147763113|gb|EDK70054.1| HemK protein [Streptococcus pneumoniae SP19-BS75] gi|301801855|emb|CBW34573.1| putative methyltransferase [Streptococcus pneumoniae INV200] gi|302597433|gb|EFL64528.1| hemK protein [Streptococcus pneumoniae BS455] gi|302636020|gb|EFL66518.1| hemK protein [Streptococcus pneumoniae SP14-BS292] gi|302638377|gb|EFL68844.1| hemK protein [Streptococcus pneumoniae SP-BS293] gi|302642103|gb|EFL72454.1| hemK protein [Streptococcus pneumoniae BS458] gi|302643950|gb|EFL74210.1| hemK protein [Streptococcus pneumoniae BS457] gi|302645157|gb|EFL75394.1| hemK protein [Streptococcus pneumoniae BS397] Length = 279 Score = 260 bits (666), Expect = 1e-67, Method: Composition-based stats. Identities = 78/248 (31%), Positives = 119/248 (47%), Gaps = 9/248 (3%) Query: 16 GLSSHQVIVDPDSVLD-DRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEP 74 LS I + + ++ F+ + + H+ I+G DFY + L + P Sbjct: 33 NLSFTDFIFALQQEVTTEEEKQFVEDIYQQLAAHKPAQYIIGQADFYGMHLKVDERVLIP 92 Query: 75 RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134 RPETE LV+ L +L + +LD+GTG+GA+ LAL K P + D+S +AL Sbjct: 93 RPETEELVELILTENLET-----NLSVLDIGTGSGAIALALAKNRPDWSVTAADVSQEAL 147 Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194 E+A NA + +SD F+ + +D+IVSNPPYI +GL V +P + Sbjct: 148 ELASENASNQNL--NIFFKKSDCFAEISEKYDIIVSNPPYISREDESEVGLNVLHSEPHL 205 Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDY 253 +L DGL+ Y IA+ +L G +EIGY Q V +F V KD Sbjct: 206 ALFADEDGLAIYCRIAEDAKDYLKDGGKIYLEIGYKQGQSVPELFRKHLPEKRVRTLKDQ 265 Query: 254 GGNDRVLL 261 G +R+++ Sbjct: 266 FGQNRMVV 273 >gi|163750756|ref|ZP_02157991.1| hemK family protein [Shewanella benthica KT99] gi|161329451|gb|EDQ00445.1| hemK family protein [Shewanella benthica KT99] Length = 278 Score = 260 bits (666), Expect = 1e-67, Method: Composition-based stats. Identities = 79/262 (30%), Positives = 126/262 (48%), Gaps = 8/262 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 D+ L + + PD L Q T + R + I I+G R+F++ Sbjct: 21 PKLDAEVMLLHIIHQQRGYLYTWPDERLTSDQVVDYTKMVQRRVLGTPIAHIVGEREFWS 80 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + ++ T PRP+TE+LV++AL + + ++LDLGTGTGA+ L+L E + Sbjct: 81 LPFMVNPTTLIPRPDTEILVETAL-----NLPLAENAQVLDLGTGTGAIALSLAYEKKEW 135 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181 + VD +A+ +AK+N + + + +QSDWF SV F++IVSNPPYI+ Sbjct: 136 QITAVDKIIEAVALAKANREHLKLQ-QVEIIQSDWFDSVTCYDFNLIVSNPPYIDETDAH 194 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P+ +L G G + IA +L G +E GY Q + + + Sbjct: 195 LDQGDVR-FEPQSALTAGEAGFADLYYIAASARDYLAPGGYLLLEHGYQQAMPLRKKMIE 253 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 V +D+G NDR L Sbjct: 254 LGYENVATVRDFGSNDRCTLGR 275 >gi|228917937|ref|ZP_04081473.1| Protein hemK [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228841734|gb|EEM86845.1| Protein hemK [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 283 Score = 260 bits (666), Expect = 1e-67, Method: Composition-based stats. Identities = 71/259 (27%), Positives = 113/259 (43%), Gaps = 7/259 (2%) Query: 8 HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67 LC V + ++++ + Q T I + ++ I ++G FY + Sbjct: 25 EIVLCHVLKTNRTGLLMNMREEITAEQETSFTEFIHKHVEGIPIQYMIGHEMFYGRSFFV 84 Query: 68 SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 + + PRPETE L+ L + + + D+GTG+GA+ + L E+ V Sbjct: 85 NEEVLIPRPETEELIVGVLDRIERHF-GDEKLHVADIGTGSGAISITLALENKNLHVYTV 143 Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVIVDCLG 184 DI+ +++E+AK NA T G D S DV+VSNPPYI L Sbjct: 144 DIAQESIEVAKENAKTLGAE--VTFYHGDLLSPFYETGQKLDVVVSNPPYIPEEDWRALS 201 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-K 243 V++ +P+ +L GG DGL YR + + L K + + EIG Q DV + + Sbjct: 202 PVVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEIGVGQGEDVKGLLQQAFP 261 Query: 244 LFLVNAFKDYGGNDRVLLF 262 V D G DR++ Sbjct: 262 HAHVEVVFDINGKDRMVFA 280 >gi|77405502|ref|ZP_00782594.1| modification methylase, HemK family [Streptococcus agalactiae H36B] gi|77175899|gb|EAO78676.1| modification methylase, HemK family [Streptococcus agalactiae H36B] Length = 276 Score = 260 bits (666), Expect = 1e-67, Method: Composition-based stats. Identities = 80/253 (31%), Positives = 124/253 (49%), Gaps = 8/253 (3%) Query: 11 LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70 L + S+ +++ +S + D + + N + KH S I G F ++ + Sbjct: 28 LKDLKQWSTTDCLLNQNSSVSDTDQQLMENIFQQLKKHRSPQYITGKAYFRDLIFFVDER 87 Query: 71 TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130 PRPETE LVD L+ + K + +LD+GTG+GA+ ++L KE P + + DIS Sbjct: 88 VLIPRPETEELVDLILSEN-----KVEDCSVLDIGTGSGAIAISLKKERPSWDVLASDIS 142 Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDF 190 AL++AK NA N ++SD FS++ FD+IVSNPPYI D +G V Sbjct: 143 VSALDLAKENA--NNCDAEVTFIESDVFSNISDKFDIIVSNPPYISYNDKDEVGKNVLAS 200 Query: 191 DPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNA 249 +P +L +GL+ YR I + +L G EIGY Q D+ + + Sbjct: 201 EPHSALFADEEGLAIYRKIIENSREYLQPRGKLYFEIGYKQGDDLRSLLKRYFPNNRCRV 260 Query: 250 FKDYGGNDRVLLF 262 KD G DR+++ Sbjct: 261 LKDIFGKDRMVVL 273 >gi|327470058|gb|EGF15522.1| protein-(glutamine-N5) methyltransferase [Streptococcus sanguinis SK330] Length = 276 Score = 260 bits (666), Expect = 1e-67, Method: Composition-based stats. Identities = 82/262 (31%), Positives = 129/262 (49%), Gaps = 11/262 (4%) Query: 3 ALRDSHSF--LCRVTG-LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRD 59 A ++ S + R LS ++ + + R L + L H+ I+G D Sbjct: 17 AGEEAESLSFVYRALNKLSFTDFVLKLRTEVSLEDREQLKAIQGQVLAHKPAQYIIGSSD 76 Query: 60 FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119 F+ + L + PRPETE LV+ L+ + + +LD+GTG+GA+ LAL+ Sbjct: 77 FHGLTLKVDERVLIPRPETEELVELILSEN-----PESSLSVLDIGTGSGAIALALVNSR 131 Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179 P ++ D+S AL +A NA + G+S +QSD S++G FD+IVSNPPYI Sbjct: 132 PDWQITASDLSKDALSLAADNAQSCGLS--LTFVQSDCLDSIQGKFDIIVSNPPYISEAN 189 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 + +GL V +P ++L DG + YR IA+ +L + G +EIGY Q V + Sbjct: 190 KNEVGLNVLTSEPHMALFAEEDGCAVYRKIAEQAGDYLTEKGKIYLEIGYKQGDSVRELL 249 Query: 240 ESR-KLFLVNAFKDYGGNDRVL 260 + + KD G DR++ Sbjct: 250 KKSFPQKQIRVLKDQFGKDRMV 271 >gi|229158890|ref|ZP_04286947.1| Protein hemK [Bacillus cereus ATCC 4342] gi|228624501|gb|EEK81271.1| Protein hemK [Bacillus cereus ATCC 4342] Length = 283 Score = 260 bits (666), Expect = 1e-67, Method: Composition-based stats. Identities = 71/259 (27%), Positives = 112/259 (43%), Gaps = 7/259 (2%) Query: 8 HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67 LC V + ++++ + Q I + ++ I ++G FY + Sbjct: 25 EIVLCHVLKTNRTGLLMNMREEITVEQEKSFAEFIHKHVEGIPIQYMIGHEMFYGRSFFV 84 Query: 68 SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 + + PRPETE L+ L + + + D+GTG+GA+ + L E+ V Sbjct: 85 NEEVLIPRPETEELIVGVLERIERHF-GDEKLHVADIGTGSGAISITLALENKNLHVYTV 143 Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVIVDCLG 184 DI+ +++E+AK NA T G D S DV+VSNPPYI L Sbjct: 144 DIAQESIEVAKENAKTLGAE--VTFYHGDLLSPFYETGQKLDVVVSNPPYIPEEDWRGLS 201 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-K 243 V++ +P+ +L GG DGL YR D + L K + + EIG Q DV + + Sbjct: 202 PVVKEHEPKRALVGGEDGLDFYRRFMDELPNVLQKKAIVAFEIGVGQGEDVKGLLQQAFP 261 Query: 244 LFLVNAFKDYGGNDRVLLF 262 V D G DR++ Sbjct: 262 HAHVEVVFDINGKDRMVFA 280 >gi|149003881|ref|ZP_01828704.1| HemK protein [Streptococcus pneumoniae SP14-BS69] gi|237650078|ref|ZP_04524330.1| HemK protein [Streptococcus pneumoniae CCRI 1974] gi|237822153|ref|ZP_04597998.1| HemK protein [Streptococcus pneumoniae CCRI 1974M2] gi|147758111|gb|EDK65115.1| HemK protein [Streptococcus pneumoniae SP14-BS69] Length = 279 Score = 260 bits (666), Expect = 1e-67, Method: Composition-based stats. Identities = 79/248 (31%), Positives = 123/248 (49%), Gaps = 9/248 (3%) Query: 16 GLSSHQVIVDPDSVLD-DRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEP 74 LS I + + ++ F+ + + H+ I+G DFY + L + P Sbjct: 33 NLSFTDFIFALQQEVTTEEEKQFVEDIYQQLATHKPAQYIIGQADFYGMHLKVDERVLIP 92 Query: 75 RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134 RPETE LV+ L +L + +LD+GTG+GA+ LAL K P + DIS +AL Sbjct: 93 RPETEELVELILTENLET-----NLSVLDIGTGSGAIALALAKNRPAWSVTAADISQEAL 147 Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194 ++A+ NA + + +SD F+ + +D+IVSNPPYI +GL V +P + Sbjct: 148 DLARENAKNQNL--QIFLKKSDCFTEISEKYDIIVSNPPYISREDESEVGLNVLYSEPHL 205 Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDY 253 +L DGL+ YR IA+ + +L G +EIGY Q V +F V KD Sbjct: 206 ALFADEDGLAIYRRIAEDATDYLKDSGKIYLEIGYKQGQCVPELFRKHLPEKRVRTLKDQ 265 Query: 254 GGNDRVLL 261 G +R+++ Sbjct: 266 FGQNRMVV 273 >gi|126725347|ref|ZP_01741189.1| Putative methylase [Rhodobacterales bacterium HTCC2150] gi|126704551|gb|EBA03642.1| Putative methylase [Rhodobacterales bacterium HTCC2150] Length = 277 Score = 260 bits (666), Expect = 1e-67, Method: Composition-based stats. Identities = 90/262 (34%), Positives = 136/262 (51%), Gaps = 8/262 (3%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 A RD+ + ++ ++ + + +Q ++ + +I+G R FY Sbjct: 21 DAARDARRLMAFALDVAPDRLTLVSGDEISLKQAIRFEESVASRALGRPVSQIIGRRHFY 80 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 ++ D +PRPETE+L+ +AL + ++LDLGTG+GA+ + LL E Sbjct: 81 GRDFIVTPDVLDPRPETEILISAALE--------QPFQKVLDLGTGSGAILVTLLAEQMG 132 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181 G G DIS AL +A NAV VSER D ++SDWF +V+G FD+IVSNPPY+ + Sbjct: 133 ANGQGADISDAALNVASRNAVALNVSERADFVKSDWFENVDGDFDLIVSNPPYVTADEYS 192 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 L VR+F+P+++L G DGL YR I + + L G VEIG Q V +F+ Sbjct: 193 ALDKGVREFEPKLALTPGGDGLMPYRLITERIQSFLRPFGRLLVEIGPTQGAAVKAMFKE 252 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 L V KD+ DRV++ Sbjct: 253 SGLSEVQVLKDFDARDRVVIGR 274 >gi|154498436|ref|ZP_02036814.1| hypothetical protein BACCAP_02425 [Bacteroides capillosus ATCC 29799] gi|150272504|gb|EDM99689.1| hypothetical protein BACCAP_02425 [Bacteroides capillosus ATCC 29799] Length = 287 Score = 260 bits (665), Expect = 1e-67, Method: Composition-based stats. Identities = 87/261 (33%), Positives = 132/261 (50%), Gaps = 6/261 (2%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A ++ +C G + Q + D D + + R L+ E + ++G +FY Sbjct: 24 AQLEARELVCFAAGKNREQFLRDMSLYASDEVEAKVAELMNRRLEGEPVAYLIGEWEFYG 83 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +S D PR +TE+L + A+ L + R+LDL G+G V LA+ +P Sbjct: 84 LPLDISRDVLIPRADTEVLAEQAI---LAARAAGEGARVLDLCAGSGCVGLAVAANAPQC 140 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW---FSSVEGLFDVIVSNPPYIESVI 179 + V D+S +AL+I + N N ++ R +Q+D SSV FDVI SNPPYI + Sbjct: 141 RTVLADVSEEALKICRQNIRRNDLNARVTCVQADARQAPSSVLWDFDVIASNPPYIPTRD 200 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 +D L VRD++P ++LDGG DGL YR IA+ L G+ E+G Q DV +I Sbjct: 201 IDGLDSSVRDYEPHLALDGGDDGLDFYRDIAEKWRTALRLGGVLLFEVGIGQAADVEQIL 260 Query: 240 ESRKLFLVNAFKDYGGNDRVL 260 + F+D GG RV+ Sbjct: 261 ARCGYEDIETFQDTGGIWRVV 281 >gi|189499813|ref|YP_001959283.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Chlorobium phaeobacteroides BS1] gi|189495254|gb|ACE03802.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Chlorobium phaeobacteroides BS1] Length = 297 Score = 260 bits (665), Expect = 1e-67, Method: Composition-based stats. Identities = 79/265 (29%), Positives = 117/265 (44%), Gaps = 7/265 (2%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 +A + L V S + ++ D ++ Q LK + I G + FY Sbjct: 28 EARLHAEILLAHVLQESRMDLYLNYDRPVEQPQLEAFRVLCRDRLKGRPLQYITGEQIFY 87 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD-VVRILDLGTGTGAVCLALLKESP 120 ++ PRPETELL + AL + ILD+GTG+G + + P Sbjct: 88 GYSFSVDERVLIPRPETELLFEYALERWQAGAPAPESGPEILDIGTGSGCLAVLFAITVP 147 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS-----VEGLFDVIVSNPPYI 175 + VD+S +ALEIA NA +GV+ER +QSD + G +D+IVSNPPYI Sbjct: 148 DARITAVDVSAEALEIAALNAEKHGVTERIRFVQSDALHPGFSEKLAGRYDLIVSNPPYI 207 Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235 L EV++++P+I+L DG + Y I S L G+ E+ + V Sbjct: 208 PESEWSALQKEVKEYEPKIALT-ISDGFAFYHAITRSASALLRAGGVLCFELHADGASVV 266 Query: 236 VRIFESRKLFLVNAFKDYGGNDRVL 260 + KDY G DRV+ Sbjct: 267 SGSMRDGGYEGIAVQKDYAGLDRVI 291 >gi|328946333|gb|EGG40477.1| protein-(glutamine-N5) methyltransferase [Streptococcus sanguinis SK1087] Length = 276 Score = 260 bits (665), Expect = 1e-67, Method: Composition-based stats. Identities = 82/262 (31%), Positives = 125/262 (47%), Gaps = 11/262 (4%) Query: 3 ALRDSHSF--LCRVT-GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRD 59 A ++ S + R LS ++ + + R L + L H I G D Sbjct: 17 AGEEAESLSFVYRALKNLSFTDFVLKLRTEVSQEDRDQLKTIQEQLLAHRPAQYINGRSD 76 Query: 60 FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119 F + L + PRPETE LV+ L+ + + +LD+GTG+GA+ LAL Sbjct: 77 FLGLSLKVDERVLIPRPETEELVELILSEN-----PESSLSVLDIGTGSGAIALALANSR 131 Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179 ++ D+S AL +A+ NA + G+ +QSD ++ G FD+IVSNPPYI Sbjct: 132 SDWQITASDLSGDALALAEENAQSCGL--NLAFVQSDCLDAISGKFDIIVSNPPYISEAD 189 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 D +GL V +P ++L DG + YR IA+ +L + G +EIGY Q DV R+ Sbjct: 190 KDEVGLNVLTSEPHMALFAEEDGYAVYRKIAEQAGDYLTEKGKIYLEIGYKQGNDVARLL 249 Query: 240 ESR-KLFLVNAFKDYGGNDRVL 260 + + KD G DR++ Sbjct: 250 KKSFPQKRIRVLKDQFGKDRMV 271 >gi|254461332|ref|ZP_05074748.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Rhodobacterales bacterium HTCC2083] gi|206677921|gb|EDZ42408.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Rhodobacteraceae bacterium HTCC2083] Length = 278 Score = 260 bits (665), Expect = 1e-67, Method: Composition-based stats. Identities = 87/257 (33%), Positives = 133/257 (51%), Gaps = 7/257 (2%) Query: 4 LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63 +RD V+ + + ++ + + ++QR + R + + I +I+ R F+ Sbjct: 23 MRDLRILAAHVSQVDASRMTLHMHDEVTEKQREHFKLLVNRRMSNMPISKIIQKRLFWGR 82 Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 + + +PR +TE L+ + L ++LDLGTG+GA+ L L E P Sbjct: 83 EFEVDLNVLDPRGDTETLIAACLKL-------GPQDKVLDLGTGSGAIGLTLTAEWPLAD 135 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183 + DIS +AL++A+ N + V++ L+SDWF +VEG FD+IVSNPPYI D L Sbjct: 136 VMCTDISDEALDVARLNMKSFDVADGVRLLRSDWFEAVEGRFDLIVSNPPYIALEEWDGL 195 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 EVR FDPR++L DGLS YR I +L KDG VEIG+ Q DV ++ + Sbjct: 196 DFEVRGFDPRMALTDEADGLSCYRVIVAQAGAYLEKDGHLMVEIGHAQGRDVQDLYAAAG 255 Query: 244 LFLVNAFKDYGGNDRVL 260 + D G DRV+ Sbjct: 256 FTQITCLPDLAGRDRVV 272 >gi|308233417|ref|ZP_07664154.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Atopobium vaginae DSM 15829] gi|328944391|ref|ZP_08241853.1| protein-(glutamine-N5) methyltransferase [Atopobium vaginae DSM 15829] gi|327490975|gb|EGF22752.1| protein-(glutamine-N5) methyltransferase [Atopobium vaginae DSM 15829] Length = 526 Score = 260 bits (665), Expect = 1e-67, Method: Composition-based stats. Identities = 71/262 (27%), Positives = 115/262 (43%), Gaps = 5/262 (1%) Query: 7 SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66 + L V G S ++ + D VLD Q + + + + + I G F ++ + Sbjct: 31 AEILLSSVMGFSRVELYLHYDQVLDASQLNAMHQRVEARSQGKPLQYITGEMPFRHIIMQ 90 Query: 67 LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126 PRPETE+LVD +A E R+L++GTG+G + L+L E + Sbjct: 91 CKPGVLIPRPETEVLVDIGIAALKEAHEYHRQPRVLEIGTGSGCIALSLASEVDSCTVLA 150 Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIESVIVDC 182 D+S ALE+A+ N + R + V G FD+++SNPPY+ + V Sbjct: 151 TDVSQDALELAQRNCQALHLEHRVTFVSCSIAQGVNPSYYGQFDLLISNPPYVPTSAVKT 210 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 L EV F+P ++LDGG DGL ++ I + L G+ VE+ + + + Sbjct: 211 LPAEVALFEPHLALDGGKDGLDIFQKILETAPHMLRPGGMLCVELFEDNVDKAQALCVAS 270 Query: 243 K-LFLVNAFKDYGGNDRVLLFC 263 V +D R L+ Sbjct: 271 GVWQKVYIERDLTHRKRFLVAR 292 >gi|237755640|ref|ZP_04584253.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Sulfurihydrogenibium yellowstonense SS-5] gi|237692204|gb|EEP61199.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Sulfurihydrogenibium yellowstonense SS-5] Length = 291 Score = 260 bits (665), Expect = 1e-67, Method: Composition-based stats. Identities = 71/269 (26%), Positives = 124/269 (46%), Gaps = 11/269 (4%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 ++ + ++ L H +I PD + + L + + + ++F+ Sbjct: 21 NPASEASILISKILDLPKHYIISYPDLEISEEDAKKLVVLSEKRASGYPMAYLTKSKEFF 80 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI-LDLGTGTGAVCLALLKESP 120 + + PRPETE+LV+ + +++ I L++G G+G + ++LLK Sbjct: 81 GLDFYIEEGILIPRPETEILVEKVIE----KLQNAKGELIGLEVGIGSGCISVSLLKNIK 136 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-----LFDVIVSNPPYI 175 K +G+DIS KALEI + NA +GV +R + D + D +VSNPPYI Sbjct: 137 NLKIIGIDISEKALEITEKNAEIHGVLDRLKLFKFDIMNEKMNSLNLPKLDFVVSNPPYI 196 Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235 + L EV+ +P+ +L G +G Y I + + L +DG + E+G Q V Sbjct: 197 KEEDYQKLQKEVKK-EPKEALISGKEGTEFYEKIVNSLKDFLKEDGFFAFEVGIGQAEKV 255 Query: 236 VRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 +I E + +KD G DRV++ + Sbjct: 256 KQILEDNGYKNIEIYKDLAGIDRVIIASK 284 >gi|157150169|ref|YP_001450440.1| protoporphyrinogen oxidase [Streptococcus gordonii str. Challis substr. CH1] gi|157074963|gb|ABV09646.1| possible protoporphyrinogen oxidase [Streptococcus gordonii str. Challis substr. CH1] Length = 276 Score = 260 bits (665), Expect = 1e-67, Method: Composition-based stats. Identities = 80/262 (30%), Positives = 125/262 (47%), Gaps = 11/262 (4%) Query: 3 ALRDSHSF--LCRVTG-LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRD 59 A ++ S + R +S ++ + +R L + L H+ I+G D Sbjct: 17 AGEEAESLSFVYRALNEISFTDFVLKLRIEVSQEEREQLKAIQKQLLAHKPAQYIIGSSD 76 Query: 60 FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119 F + L + PRPETE LV+ L+ + + +LD+GTG+GA+ LAL Sbjct: 77 FNGLNLKVDERVLIPRPETEELVELILSEN-----PETPLSVLDIGTGSGAIALALANSR 131 Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179 P ++ D+S AL +A NA + G+ +QSD +++G FD+I SNPPYI Sbjct: 132 PDWQITASDLSRDALSLAAENAQSCGL--NLTLVQSDCLDAIQGKFDIIASNPPYISEED 189 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 D +GL V +P ++L DG + YR IA+ +L + G +EIGY Q V +F Sbjct: 190 KDEVGLNVLTSEPHMALFAEEDGYAVYRKIAEQAGDYLTEKGKIYLEIGYKQGDGVADLF 249 Query: 240 ES-RKLFLVNAFKDYGGNDRVL 260 + KD G DR++ Sbjct: 250 RQFFPQKRIRVLKDQFGKDRMV 271 >gi|313606724|gb|EFR83442.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Listeria monocytogenes FSL F2-208] Length = 277 Score = 260 bits (665), Expect = 1e-67, Method: Composition-based stats. Identities = 81/256 (31%), Positives = 114/256 (44%), Gaps = 6/256 (2%) Query: 7 SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66 + L GLS ++ ++ + L+ R L E + IL FY Sbjct: 19 AEILLETRMGLSRSELWMEINRELEPNHEKQFEEDFARYLAGEPVQYILKTAPFYGYDFL 78 Query: 67 LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126 ++ D PRPETE LV A + ++K V +LD+ TG+G + +AL K P Sbjct: 79 VTEDVLIPRPETEELV----ACAEDFLKKHPVKNVLDVCTGSGIIAIALKKAFPEISVTA 134 Query: 127 VDISCKALEIAKSNAVTNGVSERF-DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185 DIS AL +AK NA+ RF +T + F E FD+IV+NPPYI + Sbjct: 135 SDISAPALAVAKKNALLLNADVRFVETDLLEAFKQNEERFDMIVANPPYISEAEKAEMSD 194 Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE-SRKL 244 V +P ++L DGL+ Y D + LN VEIGY Q V ++FE S Sbjct: 195 YVLKNEPSLALFAENDGLAIYERFVDNLKYVLNSSFWVGVEIGYTQGERVKQLFEKSYPH 254 Query: 245 FLVNAFKDYGGNDRVL 260 V KD DR + Sbjct: 255 STVIIHKDINSKDRYV 270 >gi|58583267|ref|YP_202283.1| protoporphyrinogen oxidase [Xanthomonas oryzae pv. oryzae KACC10331] gi|84625103|ref|YP_452475.1| protoporphyrinogen oxidase [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188575429|ref|YP_001912358.1| protein methyltransferase HemK (Protein-glutamine N-methyltransferase hemK) (Protein-(glutamine-N5) MTase hemK) [Xanthomonas oryzae pv. oryzae PXO99A] gi|58427861|gb|AAW76898.1| protoporphyrinogen oxidase [Xanthomonas oryzae pv. oryzae KACC10331] gi|84369043|dbj|BAE70201.1| protoporphyrinogen oxidase [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188519881|gb|ACD57826.1| protein methyltransferase HemK (Protein-glutamine N-methyltransferase hemK) (Protein-(glutamine-N5) MTase hemK) [Xanthomonas oryzae pv. oryzae PXO99A] Length = 281 Score = 260 bits (665), Expect = 2e-67, Method: Composition-based stats. Identities = 74/260 (28%), Positives = 116/260 (44%), Gaps = 7/260 (2%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ + L G + + + + R E + + G R F+ + L Sbjct: 25 DAEALLLHALGRDRAWLFMHGRDAVPLSVAQAFEALVQRREAGEPVAYLTGSRGFWTLDL 84 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 +S T PR +TELLV+ AL R++ R DLGTG+GA+ LA+ E P + + Sbjct: 85 AVSPATLIPRADTELLVELALE----RLDTSPGRRAADLGTGSGAIALAIASERPQSQLI 140 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLG 184 D S AL +A+ NA + + D +WF+ + G FD+I SNPPYI + Sbjct: 141 ATDASAAALGMARRNADRHSLP-NVDFRLGNWFAPLAGEAFDLIASNPPYIAAHDPHLQQ 199 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 ++R ++P +L G DGL R I HL G +E G++Q V + + Sbjct: 200 GDLR-YEPASALASGNDGLDDIRLIVADAPAHLLPGGWLLLEHGWDQGDAVRALLAASGF 258 Query: 245 FLVNAFKDYGGNDRVLLFCR 264 ++D DRV L + Sbjct: 259 DAAATYQDLEARDRVTLGRK 278 >gi|332360649|gb|EGJ38458.1| protein-(glutamine-N5) methyltransferase [Streptococcus sanguinis SK49] Length = 276 Score = 260 bits (665), Expect = 2e-67, Method: Composition-based stats. Identities = 82/262 (31%), Positives = 128/262 (48%), Gaps = 11/262 (4%) Query: 3 ALRDSHSF--LCRVTG-LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRD 59 A ++ S + R LS ++ + + + R L + L H+ I+G D Sbjct: 17 AGEEAESLSFVYRALNKLSFTDFVLKLRAEVSQKDRDQLKAIQEQLLVHKPAQYIIGSSD 76 Query: 60 FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119 F+ + L + PRPETE LVD L+ + + +LD+GTG+GA+ LAL Sbjct: 77 FHGLTLKVDERVLIPRPETEELVDLILSEN-----PETSLSVLDIGTGSGAIALALANSR 131 Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179 P ++ D+S AL +A NA ++G+ +QSD +++ FD+IVSNPPYI Sbjct: 132 PDWQITASDLSGDALSLATENAQSSGL--NLVFVQSDCLDAIQRKFDIIVSNPPYISEAD 189 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 D +GL V +P ++L DG + YR IA+ +L K G +EIGY Q + + Sbjct: 190 KDEVGLNVLTSEPHMALFAEEDGYAVYRKIAEQAGDYLTKKGKIYLEIGYKQGDGIRELL 249 Query: 240 ESR-KLFLVNAFKDYGGNDRVL 260 E + KD G DR++ Sbjct: 250 EKNFPQKRIRVLKDQFGKDRMV 271 >gi|71900252|ref|ZP_00682389.1| Modification methylase HemK [Xylella fastidiosa Ann-1] gi|71729965|gb|EAO32059.1| Modification methylase HemK [Xylella fastidiosa Ann-1] Length = 275 Score = 260 bits (665), Expect = 2e-67, Method: Composition-based stats. Identities = 76/259 (29%), Positives = 121/259 (46%), Gaps = 7/259 (2%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ + L + D L + + + + ++G R F+ + + Sbjct: 19 DAEALLLYALDCDRAWLFTHGDIPLAAAATESFQALVEQRARGIPVAYLIGRRGFWTLDV 78 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 +SS T PR ETE LV+ AL R++ R+ DLGTG+GA+ LA+ E P + + Sbjct: 79 IVSSATLIPRAETETLVEQAL----QRLDHASERRVADLGTGSGAIALAIACERPQAQVL 134 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLG 184 D S AL+IA NA +G++ + +W+ ++ G FD+IVSNPPYI Sbjct: 135 ATDNSAAALDIAARNASAHGLNH-VVFREGNWYEALLGERFDLIVSNPPYIAVTDPHLTQ 193 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 ++R F+P +L G DGL R +A G HL G +E G++Q + + + L Sbjct: 194 GDLR-FEPPSALISGGDGLDALRILAAGAPAHLRPGGWLVLEHGWDQGAAMRTLLHTAGL 252 Query: 245 FLVNAFKDYGGNDRVLLFC 263 V +D DRV + Sbjct: 253 VAVATVQDLEARDRVTVGR 271 >gi|229588284|ref|YP_002870403.1| protein methyltransferase [Pseudomonas fluorescens SBW25] gi|229360150|emb|CAY47007.1| protein methyltransferase [Pseudomonas fluorescens SBW25] Length = 276 Score = 260 bits (665), Expect = 2e-67, Method: Composition-based stats. Identities = 76/250 (30%), Positives = 120/250 (48%), Gaps = 8/250 (3%) Query: 16 GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75 G + + P+ ++ + R E + ILG + F+ + L ++ T PR Sbjct: 32 GKTRSYLHTWPEKIVSSEDALTFAGYLQRRRGGEPVAYILGQQGFWKLDLEVAPHTLIPR 91 Query: 76 PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135 P+TE L + + ++LDLGTG+GA+ LAL E P ++ VD +A+ Sbjct: 92 PDTE-----LLVEAALELLPATPAKVLDLGTGSGAIALALASERPAWQVTAVDRVLEAVA 146 Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194 +A+ N + L S WFS++ G +D+I+SNPPYI + + +VR F+P Sbjct: 147 LAERNRQRLHL-NNVTVLNSHWFSALPGHTYDLIISNPPYIAANDPHLVAGDVR-FEPAS 204 Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYG 254 +L G DGL R I HLN G +E GY+Q V + S V++ D G Sbjct: 205 ALVAGHDGLDDLRLIIKEAPAHLNAGGRLLLEHGYDQAPAVRDLLLSEGFEEVHSRIDLG 264 Query: 255 GNDRVLLFCR 264 G++R+ L R Sbjct: 265 GHERITLGRR 274 >gi|49476827|ref|YP_039321.1| HemK family modification methylase [Bacillus thuringiensis serovar konkukian str. 97-27] gi|49328383|gb|AAT59029.1| modification methylase, HemK family [Bacillus thuringiensis serovar konkukian str. 97-27] Length = 283 Score = 260 bits (665), Expect = 2e-67, Method: Composition-based stats. Identities = 71/259 (27%), Positives = 113/259 (43%), Gaps = 7/259 (2%) Query: 8 HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67 LC V + ++++ + Q T I + ++ I ++G FY + Sbjct: 25 EIVLCHVLKTNRTGLLMNMREEITAEQETSFTEFIHKHVEGIPIQYMIGHEMFYGRSFIV 84 Query: 68 SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 + + PRPETE L+ L + + + D+GTG+GA+ + L E+ V Sbjct: 85 NEEVLIPRPETEELIVGVLERIERHF-GDEKLHVADIGTGSGAISITLALENKDLHVYTV 143 Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVIVDCLG 184 DI+ +++E+AK NA T G D S DV+VSNPPYI L Sbjct: 144 DIAQESIEVAKENAKTLGAE--VTFYHGDLLSPFYETGQKLDVVVSNPPYIPEEDWRGLS 201 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-K 243 V++ +P+ +L GG DGL YR + + L K + + EIG Q DV + + Sbjct: 202 PVVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEIGVGQGEDVKGLLQQAFP 261 Query: 244 LFLVNAFKDYGGNDRVLLF 262 V D G DR++ Sbjct: 262 HAHVEVVFDINGKDRMVFA 280 >gi|160940108|ref|ZP_02087453.1| hypothetical protein CLOBOL_04997 [Clostridium bolteae ATCC BAA-613] gi|158436688|gb|EDP14455.1| hypothetical protein CLOBOL_04997 [Clostridium bolteae ATCC BAA-613] Length = 285 Score = 260 bits (665), Expect = 2e-67, Method: Composition-based stats. Identities = 83/272 (30%), Positives = 128/272 (47%), Gaps = 14/272 (5%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVL-----DDRQRFFLTNAIVRSLKHESIHRILG 56 D+ L V L+ + L + + I + + G Sbjct: 19 DPQLDARYLLLEVFHLNLASFLALKARELGKDEETEGKCREFMRLIEARAGRTPLQHLTG 78 Query: 57 WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116 ++F ++ PR +TE LV+ L R + R+LD+ TG+G + ++L Sbjct: 79 TQEFMGFEFLVNEHVLIPRQDTETLVELVLEEQNDREK-----RVLDMCTGSGCIAISLA 133 Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTN--GVSERFDTLQSDWFSSVEG--LFDVIVSNP 172 + +D+S +AL++A N G F+ +S+ FS++E FDVIVSNP Sbjct: 134 LMGRYRHVAALDVSAEALKVAAGNRDRLLGGYEGGFELFESNMFSALETDRTFDVIVSNP 193 Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232 PYI S +++ L EVRD +PRI+LDG DGL+ YR +A+ HL + G +EIGY+Q Sbjct: 194 PYIPSRVIEGLAPEVRDHEPRIALDGSDDGLTFYRILAEEARNHLAEGGSIYMEIGYDQS 253 Query: 233 VDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 V +F S V F+D G DRV+ R Sbjct: 254 EAVEGLFRSGGYRDVRTFQDLAGQDRVVRARR 285 >gi|312622682|ref|YP_004024295.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Caldicellulosiruptor kronotskyensis 2002] gi|312203149|gb|ADQ46476.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Caldicellulosiruptor kronotskyensis 2002] Length = 288 Score = 260 bits (665), Expect = 2e-67, Method: Composition-based stats. Identities = 72/258 (27%), Positives = 123/258 (47%), Gaps = 8/258 (3%) Query: 7 SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66 + L ++ + +VI++ ++ + + NAI + L+ + F + L Sbjct: 34 ALMMLSQILNMEKTEVILNKGLPVEQDKYEKIVNAISKYLQDYPLQYCTNKAFFMGLELY 93 Query: 67 LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126 + + PR +TE+LV+ A+ + R + LD+GTG+G + +AL K K Sbjct: 94 VDENVLIPRFDTEVLVEVAIEI----FKGRKNLYFLDIGTGSGCIAVALCKFL-DCKVFA 148 Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCLG 184 VDIS +ALE+A+ NA NGV R ++S+ F + FD I+SNPPYI + L Sbjct: 149 VDISERALEVARKNAKLNGVENRISFVRSNLFEDIPKNLRFDAIISNPPYISDEEIFELD 208 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 V +P I+L DGL +R IA+ +L G E+G++Q V I + Sbjct: 209 PRVLK-EPHIALFSKEDGLWFFREIANKAKLYLKDGGYIIFEVGFSQAEKVKEILKKNGY 267 Query: 245 FLVNAFKDYGGNDRVLLF 262 +++ +D +R + Sbjct: 268 KNISSRRDLNNVERCIFA 285 >gi|306820961|ref|ZP_07454581.1| protein-(glutamine-N5) methyltransferase [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304551075|gb|EFM39046.1| protein-(glutamine-N5) methyltransferase [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 279 Score = 260 bits (664), Expect = 2e-67, Method: Composition-based stats. Identities = 78/257 (30%), Positives = 126/257 (49%), Gaps = 4/257 (1%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L V + + D + + + + H+ IH I+G RDFY Sbjct: 23 DTELLLSFVLKKDRIYIKTNLDEKIALDDEQQIKLFVQQLKNHKPIHYIIGQRDFYGYDF 82 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 + PR +TE+LV++A+ + + + ++G G+G + + LLK+ Sbjct: 83 LVDEHVLIPRSDTEILVENAVNLLKNKKKDLKGL---EIGVGSGIISITLLKKLKNLSMT 139 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185 VDI+ A++I+K NA GVS+R ++SD F +V G +D I+SNPPYI+ + L Sbjct: 140 AVDINDYAIDISKKNAENLGVSDRLKLIKSDLFENVIGKYDFIISNPPYIDEKDMADLPE 199 Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL- 244 +V++++P +LDG +G+ Y I LN EIGYNQ + FE+ Sbjct: 200 KVKNYEPYSALDGKKNGMYFYNEIIKSGRTFLNDKFHIFFEIGYNQGEMIRHSFENCGYE 259 Query: 245 FLVNAFKDYGGNDRVLL 261 V +DYG NDRV + Sbjct: 260 ADVKIIQDYGKNDRVAI 276 >gi|206978498|ref|ZP_03239357.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacillus cereus H3081.97] gi|206743288|gb|EDZ54736.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacillus cereus H3081.97] Length = 283 Score = 260 bits (664), Expect = 2e-67, Method: Composition-based stats. Identities = 70/259 (27%), Positives = 113/259 (43%), Gaps = 7/259 (2%) Query: 8 HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67 LC V + ++++ + Q T I + ++ I ++G FY + Sbjct: 25 EIVLCHVLKTNRTGLLMNMREEITAEQEKSFTEFIHKHVEGIPIQYMIGHEMFYGRSFFV 84 Query: 68 SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 + + PRPETE L+ L + + + D+GTG+GA+ + L E+ V Sbjct: 85 NEEVLIPRPETEELIVGVLERIDRHF-NDEKLHVADIGTGSGAISITLSLENKNLHVYTV 143 Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVIVDCLG 184 DI+ +++++AK NA T G D S DV+VSNPPYI L Sbjct: 144 DIAQESIKVAKENAKTLGAE--VTFYHGDLLSPFYETGQKLDVVVSNPPYIPEEDWRGLS 201 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-K 243 V++ +P+ +L GG DGL YR + + L K + + EIG Q DV + + Sbjct: 202 PVVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEIGIGQGEDVKGLLQQAFP 261 Query: 244 LFLVNAFKDYGGNDRVLLF 262 V D G DR++ Sbjct: 262 HAHVEVVFDINGKDRMVFA 280 >gi|147679164|ref|YP_001213379.1| methylase of polypeptide chain release factors [Pelotomaculum thermopropionicum SI] gi|146275261|dbj|BAF61010.1| methylase of polypeptide chain release factors [Pelotomaculum thermopropionicum SI] Length = 300 Score = 260 bits (664), Expect = 2e-67, Method: Composition-based stats. Identities = 78/266 (29%), Positives = 124/266 (46%), Gaps = 12/266 (4%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 D+ L VTGLS + + VL + + + + R L E + + G ++F Sbjct: 35 PELDAEVLLAYVTGLSRAGLYRKKELVLTEEEEARFIDLVERRLAGEPVAYLTGHKEFMG 94 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + ++ PRPETEL+V++AL F I D+GTG+GAV ++L Sbjct: 95 LDFVVNRSVLIPRPETELMVETALKFL------PGAPVIADVGTGSGAVAVSLAFFVKEA 148 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-----FDVIVSNPPYIES 177 DIS +AL +A+ NA +GV R D + G D+I +N PYI + Sbjct: 149 VVYATDISREALAVARLNAARHGVEGRVHFCPGDLLEPLTGRVMPGSLDLIAANLPYIAT 208 Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237 + L EVR F+P ++LDGG GL+ YR + + L + G+ +EI Q ++ Sbjct: 209 EDLPGLPREVRLFEPPVALDGGPGGLALYRRLIPAAAGFLKQGGIMLMEISPGQWAEMAG 268 Query: 238 IFESRKLFLVNAFKDYGGNDRVLLFC 263 + + + KD G DR++L Sbjct: 269 LL-QPPQWEASLLKDLAGLDRLVLAR 293 >gi|254853929|ref|ZP_05243277.1| modification methylase [Listeria monocytogenes FSL R2-503] gi|300764958|ref|ZP_07074946.1| HemK family modification methylase [Listeria monocytogenes FSL N1-017] gi|258607317|gb|EEW19925.1| modification methylase [Listeria monocytogenes FSL R2-503] gi|300514258|gb|EFK41317.1| HemK family modification methylase [Listeria monocytogenes FSL N1-017] Length = 283 Score = 260 bits (664), Expect = 2e-67, Method: Composition-based stats. Identities = 81/256 (31%), Positives = 113/256 (44%), Gaps = 6/256 (2%) Query: 7 SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66 + L GLS ++ ++ L+ R L E + IL FY Sbjct: 25 AEILLETRMGLSRSELWMEISRELEPNHEKQFEEDFARYLAGEPVQYILKTAPFYGYDFL 84 Query: 67 LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126 ++ D PRPETE LV A + ++K V +LD+ TG+G + +AL K P Sbjct: 85 VTEDVLIPRPETEELV----ACAEDFLKKHPVKNVLDVCTGSGIIAIALKKAFPDISVTA 140 Query: 127 VDISCKALEIAKSNAVTNGVSERF-DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185 DIS AL +AK NA+ RF +T + F E FD+IV+NPPYI + Sbjct: 141 SDISAPALAVAKKNALLLNADVRFVETDLLEAFKQNEERFDMIVANPPYISEAEKAEMSD 200 Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE-SRKL 244 V +P ++L DGL+ Y D + LN VEIGY Q V ++FE S Sbjct: 201 YVLKNEPSLALFAENDGLAIYERFVDNLQYVLNSSFWVGVEIGYTQGERVKQLFEKSYPH 260 Query: 245 FLVNAFKDYGGNDRVL 260 V KD DR + Sbjct: 261 STVIIHKDINSKDRYV 276 >gi|292490386|ref|YP_003525825.1| modification methylase, HemK family [Nitrosococcus halophilus Nc4] gi|291578981|gb|ADE13438.1| modification methylase, HemK family [Nitrosococcus halophilus Nc4] Length = 283 Score = 260 bits (664), Expect = 2e-67, Method: Composition-based stats. Identities = 79/261 (30%), Positives = 125/261 (47%), Gaps = 7/261 (2%) Query: 4 LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63 ++ L + + + P+ L Q + R K E + I G ++F+++ Sbjct: 25 RLEAELLLSYLLEVERSYLHAWPEQELTSVQWSCFEQLLQRRAKGEPLAYIRGRQEFWSL 84 Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 L ++ T PRPETE LV+ ++ R+ ++I DLGTG+GA+ LA+ E P + Sbjct: 85 DLRVTEATLIPRPETEQLVEE----TIKRMALEQSLKIADLGTGSGAIALAIGSERPQAQ 140 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDC 182 +G DIS AL +A+ N G+ E + DWF+ + G FD++VSNPPYI Sbjct: 141 VIGADISAVALAVARENGSRLGL-ENVTFRRGDWFAPLRGERFDLLVSNPPYIAEGDPHL 199 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 +F+P +L G GL R IA G HL + G +E GY+Q ++ + + Sbjct: 200 TQGG-LEFEPDTALIAGDRGLEAIRHIATGAREHLVEGGWLLLEHGYDQGPLLLELLTTL 258 Query: 243 KLFLVNAFKDYGGNDRVLLFC 263 V F D G RV++ Sbjct: 259 GYRQVVDFCDLAGVPRVVVGQ 279 >gi|226525304|gb|ACO70903.1| protein-(glutamine-N5) methyltransferase release factor-specific [uncultured Verrucomicrobia bacterium] Length = 280 Score = 259 bits (663), Expect = 2e-67, Method: Composition-based stats. Identities = 77/260 (29%), Positives = 130/260 (50%), Gaps = 5/260 (1%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A + L V G ++ ++ D L D++ L + + + + E + +LG +F Sbjct: 23 ARLNIEHLLAHVLGKRRMELYLEFDRPLGDQELNPLRDLVKKRAQGEPLQHLLGTAEFCG 82 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 PRPETE L + +A R RILD+GTG+G + L L P Sbjct: 83 RTFGCDRRALVPRPETEQLCELVVAEFKKR--SVSPRRILDVGTGSGVIALTLAMTWPDA 140 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182 VD+S +AL +A+ NA G+++R ++SD F++VEG FD++V+N PYI+ ++ Sbjct: 141 AMEAVDVSPEALTLARENAARLGLADRIRLVESDLFAAVEGEFDLVVANLPYIDQGVIPT 200 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 + EV+ DPR +LDGG G+ + ++HL G+ ++EIG++Q V + + Sbjct: 201 VTREVQR-DPRTALDGGEGGMRVFERFIPAATQHLR--GMLALEIGHDQSDPVRALLAAH 257 Query: 243 KLFLVNAFKDYGGNDRVLLF 262 + DY G +R + Sbjct: 258 NYQDIRVVSDYQGRNRFVFA 277 >gi|16804580|ref|NP_466065.1| hypothetical protein lmo2542 [Listeria monocytogenes EGD-e] gi|224503218|ref|ZP_03671525.1| hypothetical protein LmonFR_11988 [Listeria monocytogenes FSL R2-561] gi|254831035|ref|ZP_05235690.1| hypothetical protein Lmon1_06733 [Listeria monocytogenes 10403S] gi|16412030|emb|CAD00620.1| lmo2542 [Listeria monocytogenes EGD-e] Length = 283 Score = 259 bits (663), Expect = 2e-67, Method: Composition-based stats. Identities = 80/256 (31%), Positives = 113/256 (44%), Gaps = 6/256 (2%) Query: 7 SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66 + L GLS ++ ++ L+ R L E + IL FY Sbjct: 25 AEILLETRMGLSRSELWMEISRELEPNHEKQFEEDFARYLAGEPVQYILKTAPFYGYDFL 84 Query: 67 LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126 ++ D PRPETE LV A + ++K V +LD+ TG+G + +AL K P Sbjct: 85 VTEDVLIPRPETEELV----ACAEAFLKKHPVKNVLDVCTGSGIIAIALKKAFPEISVTA 140 Query: 127 VDISCKALEIAKSNAVTNGVSERF-DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185 DIS AL +A+ NA+ RF +T + F E FD+IV+NPPYI + Sbjct: 141 SDISAPALVVARKNALLLNADVRFVETDLLEAFKQNEERFDMIVANPPYISEAEKAEMSD 200 Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE-SRKL 244 V +P ++L DGL+ Y D + LN VEIGY Q V ++FE S Sbjct: 201 YVLKNEPSLALFAENDGLAIYERFVDNLKYVLNSSFWVGVEIGYTQGERVKQLFEKSYPH 260 Query: 245 FLVNAFKDYGGNDRVL 260 V KD DR + Sbjct: 261 TTVVIHKDINSKDRYV 276 >gi|154491829|ref|ZP_02031455.1| hypothetical protein PARMER_01450 [Parabacteroides merdae ATCC 43184] gi|154088070|gb|EDN87115.1| hypothetical protein PARMER_01450 [Parabacteroides merdae ATCC 43184] Length = 291 Score = 259 bits (663), Expect = 2e-67, Method: Composition-based stats. Identities = 72/264 (27%), Positives = 120/264 (45%), Gaps = 14/264 (5%) Query: 8 HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67 + RV + H + D L + ++ + + + R + E I ILG DFY+++ + Sbjct: 35 RLIMERVCNIQPHHFLFCKDKELPESEKSRIHDIVERLKQMEPIQYILGTADFYSLQFEV 94 Query: 68 SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 PRPETE LV+ + + + ++ILD+GTG+G + + L K + Sbjct: 95 DPSVLIPRPETEELVEQVILDNADQ-----KIKILDIGTGSGCIAVTLRKHLKKASVIAT 149 Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSS------VEGLFDVIVSNPPYIESVIVD 181 DIS +AL A+ NA N + +Q+D + + DVIVSNPPYI+ Sbjct: 150 DISAEALATARRNAKRNNTT--VTFIQTDILDPEKAEMDIPFILDVIVSNPPYIKEEEKK 207 Query: 182 CLGLEVRDFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 + V D++P ++L D L +Y IA + L ++G EI VV + E Sbjct: 208 DMERNVLDYEPHLALFVPDNDPLLYYWHIAHFGKKKLRRNGHLYFEINAACGNMVVEMLE 267 Query: 241 SRKLFLVNAFKDYGGNDRVLLFCR 264 + +D G DR++ + Sbjct: 268 EEGYKNIELIQDLSGKDRIIKARK 291 >gi|24379521|ref|NP_721476.1| putative protoporphyrinogen oxidase [Streptococcus mutans UA159] gi|290580478|ref|YP_003484870.1| putative protoporphyrinogen oxidase [Streptococcus mutans NN2025] gi|24377462|gb|AAN58782.1|AE014946_7 putative protoporphyrinogen oxidase [Streptococcus mutans UA159] gi|254997377|dbj|BAH87978.1| putative protoporphyrinogen oxidase [Streptococcus mutans NN2025] Length = 278 Score = 259 bits (663), Expect = 3e-67, Method: Composition-based stats. Identities = 82/266 (30%), Positives = 126/266 (47%), Gaps = 11/266 (4%) Query: 1 MQALRDSHSFLCRVT----GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILG 56 ++AL + L V G + I+ + + L + + +H I G Sbjct: 15 LEALGEEKESLAYVFKDCKGWNQTDFILQQPQEIAEADLTKLEEIMQQLRQHIPAQYITG 74 Query: 57 WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116 F ++ L++ PRPETE LV L + + R ++LD+GTG+GA+ LAL Sbjct: 75 KAYFADLILSVDERVLIPRPETEELVKLILKEN----QHRSSAKLLDIGTGSGAIALALA 130 Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE 176 K P ++ DIS AL +A+ NA N + LQSD FS + +D+IVSNPPYI Sbjct: 131 KAQPDWQVWASDISEDALNLAQENATVNQAA--VTFLQSDIFSHISDKYDIIVSNPPYIS 188 Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236 D + V +P ++L DGL+ Y+ +A +L G +EIGY Q V Sbjct: 189 LRDQDEVEQNVLAHEPHLALFADNDGLAFYQKLALEAEHYLKLTGKIYLEIGYKQGEAVS 248 Query: 237 RIFE-SRKLFLVNAFKDYGGNDRVLL 261 ++FE V +D G DR+++ Sbjct: 249 QLFERQFPNKRVRLLQDSFGKDRMVV 274 >gi|329897170|ref|ZP_08271910.1| HemK family modification methylase [gamma proteobacterium IMCC3088] gi|328921325|gb|EGG28719.1| HemK family modification methylase [gamma proteobacterium IMCC3088] Length = 275 Score = 259 bits (663), Expect = 3e-67, Method: Composition-based stats. Identities = 86/259 (33%), Positives = 121/259 (46%), Gaps = 8/259 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A ++H L +V+GL + P+ L R + R + +LG R+FY Sbjct: 19 ANLEAHLLLEQVSGLERTTLFAWPERELAPRVVQQYRALVDRRASGVPVAYLLGRREFYG 78 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L + PRPETELLVD AL +L +LDLGTG+GA+ LAL + P + Sbjct: 79 LDLHVDQRVLIPRPETELLVDVALGLALDV-----KAEVLDLGTGSGAIALALASQRPQW 133 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181 VD S AL++A +N G+ D SDWF+S+ FD+IVSNPPY+E Sbjct: 134 SICAVDRSEDALDVATANQENLGIK-NIDFYCSDWFASLPQYQFDLIVSNPPYVEPDSAY 192 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+P +L GL+ I D ++L G +E GY Q + + F Sbjct: 193 LQQGDVR-FEPIKALVAPNAGLADLFAIIDQAPKYLKSGGTLWLEHGYQQAERLRQRFID 251 Query: 242 RKLFLVNAFKDYGGNDRVL 260 D G DRV Sbjct: 252 LGYQGAQTHCDLQGLDRVT 270 >gi|229064979|ref|ZP_04200277.1| Protein hemK [Bacillus cereus AH603] gi|228716280|gb|EEL67992.1| Protein hemK [Bacillus cereus AH603] Length = 283 Score = 259 bits (663), Expect = 3e-67, Method: Composition-based stats. Identities = 72/259 (27%), Positives = 113/259 (43%), Gaps = 7/259 (2%) Query: 8 HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67 LC V + ++++ + Q I + ++ I +LG+ FY + Sbjct: 25 EIVLCHVLKTNRTGMLMNMREEITAEQEKSFAQFIHKHVEGIPIQYMLGYEMFYGRSFFV 84 Query: 68 SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 + + PRPETE L+ L + + I D+GTG+GA+ + L E+ V Sbjct: 85 NEEVLIPRPETEELIVGVLERIERHFGNEE-LHIADIGTGSGAISITLALENKNLHVYTV 143 Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVIVDCLG 184 DI+ +++E+AK NA T G D S DV+VSNPPYI L Sbjct: 144 DIAQESIEVAKENAKTLGAD--VTFYHGDLLSPFYETGQKLDVVVSNPPYIPEEDWRGLS 201 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-K 243 V++ +P+ +L GG DGL YR + + L K + + EIG Q DV + + Sbjct: 202 TVVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEIGVGQGEDVKALLQQTFP 261 Query: 244 LFLVNAFKDYGGNDRVLLF 262 V D G DR++ Sbjct: 262 RAQVEVVFDINGKDRMVFA 280 >gi|222098800|ref|YP_002532858.1| modification methylase, hemk family [Bacillus cereus Q1] gi|221242859|gb|ACM15569.1| modification methylase, HemK family [Bacillus cereus Q1] Length = 283 Score = 259 bits (663), Expect = 3e-67, Method: Composition-based stats. Identities = 70/259 (27%), Positives = 113/259 (43%), Gaps = 7/259 (2%) Query: 8 HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67 LC V + ++++ + Q T I + ++ I ++G FY + Sbjct: 25 EIVLCHVLKTNRTGLLMNMREEITAEQEKSFTEFIHKHVEGIPIQYMIGHEMFYGRSFFV 84 Query: 68 SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 + + PRPETE L+ L + + + D+GTG+GA+ + L E+ V Sbjct: 85 NEEVLIPRPETEELIVGVLERIDRHF-NDEKLHVADIGTGSGAISITLSLENKNLHVYTV 143 Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVIVDCLG 184 DI+ +++++AK NA T G D S DV+VSNPPYI L Sbjct: 144 DIAQESIKVAKENAKTLGAE--VTFYHGDLLSPFYETGQKLDVVVSNPPYIPEEDWRGLS 201 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-K 243 V++ +P+ +L GG DGL YR + + L K + + EIG Q DV + + Sbjct: 202 PVVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEIGVGQGEDVKGLLQQAFP 261 Query: 244 LFLVNAFKDYGGNDRVLLF 262 V D G DR++ Sbjct: 262 HAHVEVVFDINGKDRMVFA 280 >gi|307244043|ref|ZP_07526162.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Peptostreptococcus stomatis DSM 17678] gi|306492567|gb|EFM64601.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Peptostreptococcus stomatis DSM 17678] Length = 300 Score = 259 bits (663), Expect = 3e-67, Method: Composition-based stats. Identities = 74/280 (26%), Positives = 131/280 (46%), Gaps = 19/280 (6%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A D LC + G +++++ LD + + I + L I I+ ++F Sbjct: 21 ARLDVEIILCHILGWDRVKLMINYGQDLDSDKMSIFEDMIAKRLDQMPIAYIINKKEFMG 80 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFS--LPRIEKRDVVRILDLGTGTGAVCLALLKESP 120 + + PRP+TELLV+ + + ++ + +LD+ TG+GA+ L+ Sbjct: 81 LDFYVDERVLIPRPDTELLVEDLVESIGEMESTKQARDINVLDMCTGSGAIILSGASLWK 140 Query: 121 F-------------FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGL 164 +GVDIS ALE+A N + G+ + ++SD F+++ G Sbjct: 141 DRAKEDSGKAKDGTVNFIGVDISKSALEVATINRKSFGL-DTVKLIESDLFTNLGDYRGC 199 Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224 D+IVSNPPYIE +++ L +V+D++PR++L GG DG+ Y I + +L G Sbjct: 200 LDIIVSNPPYIEDQVIEGLERDVKDYEPRLALAGGNDGMDFYNRIIEDAYDYLKLGGKLV 259 Query: 225 VEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 E G++Q +++ KD G DR++ + Sbjct: 260 FESGHDQAEKILKKMAQVGYTKAYTKKDIQGFDRLVAAYK 299 >gi|319945453|ref|ZP_08019713.1| protein methyltransferase HemK [Lautropia mirabilis ATCC 51599] gi|319741239|gb|EFV93666.1| protein methyltransferase HemK [Lautropia mirabilis ATCC 51599] Length = 297 Score = 259 bits (663), Expect = 3e-67, Method: Composition-based stats. Identities = 74/261 (28%), Positives = 117/261 (44%), Gaps = 6/261 (2%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 ++ L +TG + D D R E + +LG ++FY Sbjct: 28 PRAEARRLLACLTGQPLTWFMAHGDDPADPDIAARFQALAERRRAGEPLAYLLGQQEFYG 87 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFS--LPRIEKRDVVRILDLGTGTGAVCLALLKESP 120 +S PR +TE LV++AL L + + + +L+LGTG+G + + L E+P Sbjct: 88 RPFAVSPAVLIPRADTETLVETALEQLTLLRQQRRAVPLSLLELGTGSGIIAITLALEAP 147 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESV 178 + V+ S +AL +A+ NA G ++R W+ ++ FD+IVSNPPYI + Sbjct: 148 DTEVHAVERSPEALAMAQQNAKALG-ADRIHWHAGSWWQALASPRHFDLIVSNPPYIAAG 206 Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238 ++R F+P +L G DGL R I G HL+ G +E GY+Q+ V + Sbjct: 207 DHHLQQGDLR-FEPPQALAAGPDGLDDLRIIIGGAPAHLSPGGWLLLEHGYDQEAPVQAL 265 Query: 239 FESRKLFLVNAFKDYGGNDRV 259 V +D G RV Sbjct: 266 LRDAGFAEVFTRRDLAGQPRV 286 >gi|262038063|ref|ZP_06011468.1| methyltransferase [Leptotrichia goodfellowii F0264] gi|261747883|gb|EEY35317.1| methyltransferase [Leptotrichia goodfellowii F0264] Length = 367 Score = 259 bits (662), Expect = 3e-67, Method: Composition-based stats. Identities = 79/265 (29%), Positives = 125/265 (47%), Gaps = 5/265 (1%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHE-SIHRILGWRDF 60 +A + V + + LD + + N I + K + + +L ++F Sbjct: 103 EAKLIAEIIFSHVLEIDRMLLFTKYKENLDKEKTDKIRNFIQKVGKEKFPVQYLLNEQEF 162 Query: 61 YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120 Y + +++ PR +TE+LV+ A+ R EK + +ILD+GTG+GA+ + L E P Sbjct: 163 YGRKFYVNTGVLIPRQDTEVLVEEAIKTL--RSEKTETPKILDIGTGSGAIGITLALEIP 220 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVI 179 K +G DIS KALEI++ N + +E +SD F ++E FD+I+SNPPYI S Sbjct: 221 DSKIMGTDISDKALEISEKN-KSLLNAENIKFFKSDLFENIEYKKFDMIISNPPYIASDE 279 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 + + +P +L +GL YR I+ +L G E GY Q V +I Sbjct: 280 TKVMSEDTLLHEPDEALFAEDEGLYFYREISFQGKEYLRNGGYMLFETGYKQAETVKKIM 339 Query: 240 ESRKLFLVNAFKDYGGNDRVLLFCR 264 E VN KD RV+ + Sbjct: 340 EITGYKNVNIIKDMQNIGRVVTGQK 364 >gi|118588513|ref|ZP_01545922.1| protoporphyrinogen oxidase [Stappia aggregata IAM 12614] gi|118439219|gb|EAV45851.1| protoporphyrinogen oxidase [Stappia aggregata IAM 12614] Length = 282 Score = 259 bits (662), Expect = 3e-67, Method: Composition-based stats. Identities = 91/262 (34%), Positives = 137/262 (52%), Gaps = 6/262 (2%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 D+ + GL ++ + L+ + RILG R+FY R Sbjct: 24 LDARLLVSAALGLPLSDLVFREHEEAAPEAAGLAEAYAQKRLEGMPVGRILGEREFYGRR 83 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L+ T EPRP+TE L+D+ L R + + D+GTGTGA+ + LL E P + Sbjct: 84 FLLNPATLEPRPDTETLIDAVLE----RCTADEAPVMCDIGTGTGAIAVTLLAELPRSRM 139 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVDC 182 + VD+S +ALE A SNA +GV +R T+++D+ S++ EG FD +VSNPPYI + ++ Sbjct: 140 IAVDLSEQALECAASNAALHGVGDRLLTVRADYTSALRPEGGFDWVVSNPPYIRTAVLAE 199 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 L EV DP+++LDGG DGL+ Y I + L G ++EIG++Q D+ + Sbjct: 200 LSREVIQHDPKLALDGGEDGLTAYVRILTDAEKLLRPGGRIALEIGFDQGADLKKQLRHH 259 Query: 243 KLFLVNAFKDYGGNDRVLLFCR 264 + KD GNDRV+ R Sbjct: 260 GFVEIEIIKDLSGNDRVVAARR 281 >gi|55822720|ref|YP_141161.1| protoporphyrinogen oxidase [Streptococcus thermophilus CNRZ1066] gi|55738705|gb|AAV62346.1| protoporphyrinogen oxidase [Streptococcus thermophilus CNRZ1066] Length = 277 Score = 259 bits (662), Expect = 3e-67, Method: Composition-based stats. Identities = 79/247 (31%), Positives = 123/247 (49%), Gaps = 8/247 (3%) Query: 17 LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRP 76 ++ + + L + + H+ ILG+ +F+ +R + PRP Sbjct: 34 WDLTHFVLQLRQEVSEEDGNLLAHIFTQLTAHKPAQYILGYEEFHGLRFQVDERVLIPRP 93 Query: 77 ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136 ETE LVD LA + +++LD+GTG+GA+ ++L K P ++ D+S AL + Sbjct: 94 ETEELVDLILAEN-----PNTELKVLDIGTGSGAIAVSLKKSRPMWQVTASDLSADALVL 148 Query: 137 AKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL 196 AK NA N V + +D F +V G FD+IVSNPPYI D +GL V +P+++L Sbjct: 149 AKDNAKLNRVD--ISFVLADVFENVSGCFDIIVSNPPYISENDKDEVGLNVLTSEPKMAL 206 Query: 197 DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDYGG 255 DGL+ YR I + ++LN G EIGY Q D+ ++ V KD G Sbjct: 207 FADEDGLAIYRQILEDADKYLNPQGKLYFEIGYKQGEDLRKLLSLHFPDKHVRVLKDQFG 266 Query: 256 NDRVLLF 262 DR+++ Sbjct: 267 QDRMVVM 273 >gi|229199454|ref|ZP_04326117.1| Protein hemK [Bacillus cereus m1293] gi|228584030|gb|EEK42185.1| Protein hemK [Bacillus cereus m1293] Length = 283 Score = 259 bits (662), Expect = 3e-67, Method: Composition-based stats. Identities = 70/259 (27%), Positives = 112/259 (43%), Gaps = 7/259 (2%) Query: 8 HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67 LC V + ++++ + Q I + ++ I ++G FY + Sbjct: 25 EIVLCHVLKTNRTGLLMNMREEITAEQEKSFAEFIHKHVEGIPIQYMIGHEMFYGRSFFV 84 Query: 68 SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 + + PRPETE L+ L + + + D+GTG+GA+ + L E+ V Sbjct: 85 NEEVLIPRPETEELIVGVLERIERHF-GDEKLHVADIGTGSGAISITLALENKNLHMYTV 143 Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVIVDCLG 184 DI+ +++E+AK NA T G D S DV+VSNPPYI L Sbjct: 144 DIAQESIEVAKENAKTLGAE--VTFYHGDLLSPFYETGQKLDVVVSNPPYIPEEDWRGLS 201 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-K 243 V++ +P+ +L GG DGL YR + + L K + + EIG Q DV + + Sbjct: 202 PVVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEIGVGQGEDVKGLLQQAFP 261 Query: 244 LFLVNAFKDYGGNDRVLLF 262 V D G DR++ Sbjct: 262 HAHVEVVFDINGKDRMVFA 280 >gi|116749149|ref|YP_845836.1| HemK family modification methylase [Syntrophobacter fumaroxidans MPOB] gi|116698213|gb|ABK17401.1| modification methylase, HemK family [Syntrophobacter fumaroxidans MPOB] Length = 288 Score = 259 bits (662), Expect = 3e-67, Method: Composition-based stats. Identities = 83/266 (31%), Positives = 124/266 (46%), Gaps = 9/266 (3%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 Q ++ L V Q+ + D L + AI R E I G ++F+ Sbjct: 26 QPRANAEVLLAHVLDTERIQLYLRYDQPLGSAELARYREAIRRRASCEPTQYITGRQEFW 85 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 ++ L + PRPETE+LV+ AL + R+LD+GTG+GA+ ++L E Sbjct: 86 SLELEVGPAVLIPRPETEVLVEKALE-----LLPGTRARVLDIGTGSGAIAVSLATERKD 140 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESV 178 V D S ALEIA+ NAV + V +R D FS+ +FD+IV+NPPYI Sbjct: 141 LTVVATDRSPGALEIARRNAVRHKVEDRVWLAAMDLFSAFLPAVPVFDLIVANPPYIGDF 200 Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238 L E+ + +P +L GG+DGL R I L G +EIG Q + + Sbjct: 201 EFAALPREIAEHEPVEALRGGVDGLDVIRKILAEAPFFLKPGGSLLIEIGKGQDEMLPLV 260 Query: 239 FESRKLFLVNAFKDYGGNDRVLLFCR 264 ++ ++ +DY G RV+ CR Sbjct: 261 PDNSRIDTCGFIRDYSGVLRVMH-CR 285 >gi|116627621|ref|YP_820240.1| protoporphyrinogen oxidase [Streptococcus thermophilus LMD-9] gi|116100898|gb|ABJ66044.1| Methylase of polypeptide chain release factor [Streptococcus thermophilus LMD-9] gi|312278143|gb|ADQ62800.1| Protein-(Glutamine-N5) methyltransferase, release factor-specific [Streptococcus thermophilus ND03] Length = 277 Score = 259 bits (662), Expect = 4e-67, Method: Composition-based stats. Identities = 79/247 (31%), Positives = 123/247 (49%), Gaps = 8/247 (3%) Query: 17 LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRP 76 ++ + + L + + H+ ILG+ +F+ +R + PRP Sbjct: 34 WDLTHFVLQLRQEVSEEDGNLLAHIFTQLTAHKPAQYILGYEEFHGLRFQVDERVLIPRP 93 Query: 77 ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136 ETE LVD LA + +++LD+GTG+GA+ ++L K P ++ D+S AL + Sbjct: 94 ETEELVDLILAEN-----PNTELKVLDIGTGSGAIAVSLKKSRPMWQVTASDLSADALVL 148 Query: 137 AKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL 196 AK NA N V + +D F +V G FD+IVSNPPYI D +GL V +P+++L Sbjct: 149 AKDNAKLNRVD--ISFVLADVFENVSGCFDIIVSNPPYISENDKDEVGLNVLTSEPKMAL 206 Query: 197 DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDYGG 255 DGL+ YR I + ++LN G EIGY Q D+ ++ V KD G Sbjct: 207 FADEDGLAIYRQILEDADKYLNPQGKLYFEIGYKQGEDLRKLLSLHFPDKHVRVLKDQFG 266 Query: 256 NDRVLLF 262 DR+++ Sbjct: 267 QDRMVVM 273 >gi|47096964|ref|ZP_00234540.1| modification methylase, HemK family [Listeria monocytogenes str. 1/2a F6854] gi|254828118|ref|ZP_05232805.1| modification methylase [Listeria monocytogenes FSL N3-165] gi|254900319|ref|ZP_05260243.1| hypothetical protein LmonJ_10912 [Listeria monocytogenes J0161] gi|254913442|ref|ZP_05263454.1| modification methylase [Listeria monocytogenes J2818] gi|254937823|ref|ZP_05269520.1| modification methylase [Listeria monocytogenes F6900] gi|284802980|ref|YP_003414845.1| hypothetical protein LM5578_2737 [Listeria monocytogenes 08-5578] gi|284996121|ref|YP_003417889.1| hypothetical protein LM5923_2686 [Listeria monocytogenes 08-5923] gi|47014674|gb|EAL05631.1| modification methylase, HemK family [Listeria monocytogenes str. 1/2a F6854] gi|258600503|gb|EEW13828.1| modification methylase [Listeria monocytogenes FSL N3-165] gi|258610427|gb|EEW23035.1| modification methylase [Listeria monocytogenes F6900] gi|284058542|gb|ADB69483.1| hypothetical protein LM5578_2737 [Listeria monocytogenes 08-5578] gi|284061588|gb|ADB72527.1| hypothetical protein LM5923_2686 [Listeria monocytogenes 08-5923] gi|293591449|gb|EFF99783.1| modification methylase [Listeria monocytogenes J2818] Length = 283 Score = 259 bits (662), Expect = 4e-67, Method: Composition-based stats. Identities = 80/256 (31%), Positives = 113/256 (44%), Gaps = 6/256 (2%) Query: 7 SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66 + L GLS ++ ++ L+ R L E + IL FY Sbjct: 25 AEILLETRMGLSRSELWMEISRELEPNHEKQFEEDFARYLAGEPVQYILKTAPFYGYDFL 84 Query: 67 LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126 ++ D PRPETE LV A + ++K V +LD+ TG+G + +AL K P Sbjct: 85 VTEDVLIPRPETEELV----ACAEAFLKKHPVKNVLDVCTGSGIIAIALKKAFPEISVTA 140 Query: 127 VDISCKALEIAKSNAVTNGVSERF-DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185 DIS AL +A+ NA+ RF +T + F E FD+IV+NPPYI + Sbjct: 141 SDISAPALVVARKNALLLNADVRFVETDLLEAFKQNEERFDMIVANPPYISEAEKAEMSD 200 Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE-SRKL 244 V +P ++L DGL+ Y D + LN VEIGY Q V ++FE S Sbjct: 201 YVLKNEPSLALFAENDGLAIYERFVDNLKYVLNSSFWVGVEIGYTQGERVKQLFEKSYPH 260 Query: 245 FLVNAFKDYGGNDRVL 260 V KD DR + Sbjct: 261 TTVVIHKDINSKDRYV 276 >gi|56697311|ref|YP_167677.1| HemK family modification methylase [Ruegeria pomeroyi DSS-3] gi|56679048|gb|AAV95714.1| modification methylase, HemK family [Ruegeria pomeroyi DSS-3] Length = 271 Score = 259 bits (662), Expect = 4e-67, Method: Composition-based stats. Identities = 94/259 (36%), Positives = 130/259 (50%), Gaps = 8/259 (3%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 RD+ L + + +V + L I + ++G RDFY Sbjct: 15 DPARDARLLLAHAARIEASRVTLIAPEDLAPEIAERYDQLISLRAVRVPVSHLVGERDFY 74 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 R +S + +PRPETE L+++AL +LDLG G+GA+ + LL E P Sbjct: 75 GRRFKVSGEVLDPRPETETLIEAAL--------NAPFEHVLDLGVGSGAILVTLLAERPS 126 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181 G+GVD+S A A +NAV + V R D +SDWF +VEG FD+IVSNPPYI ++ Sbjct: 127 ATGLGVDLSEAACLQASANAVLHRVEARADIRRSDWFGAVEGRFDLIVSNPPYIALSEME 186 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 L EVR +P ++L G DGL YR IA G +L G VEIG Q V R+F++ Sbjct: 187 ALAPEVRRHEPELALTDGGDGLGAYRHIAAGAPDYLLPGGRLLVEIGPTQAQAVSRLFQA 246 Query: 242 RKLFLVNAFKDYGGNDRVL 260 L + D G DRV+ Sbjct: 247 AGLSGLRVIPDLDGRDRVV 265 >gi|223932123|ref|ZP_03624127.1| modification methylase, HemK family [Streptococcus suis 89/1591] gi|302023744|ref|ZP_07248955.1| methyltransferase [Streptococcus suis 05HAS68] gi|330832777|ref|YP_004401602.1| modification methylase, HemK family [Streptococcus suis ST3] gi|223899104|gb|EEF65461.1| modification methylase, HemK family [Streptococcus suis 89/1591] gi|329307000|gb|AEB81416.1| modification methylase, HemK family [Streptococcus suis ST3] Length = 277 Score = 258 bits (661), Expect = 4e-67, Method: Composition-based stats. Identities = 82/248 (33%), Positives = 123/248 (49%), Gaps = 8/248 (3%) Query: 16 GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75 GL+ + ++ + + + + +H I+G DF+ + + PR Sbjct: 33 GLNFTEFLLLLRQEVTPTDKEEIDAIFQQLSQHRPAQYIIGKADFHGLEFAVDERVLIPR 92 Query: 76 PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135 PETE LV+ L + +RILD+GTG+GA+ ++L K ++ V VDIS AL Sbjct: 93 PETEELVNLILQEN-----SGAGLRILDIGTGSGAIAISLAKARSDWEVVAVDISKDALA 147 Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195 +A+ NA TN VS L+SD F +V G FD+IVSNPPYI D +GL V +P ++ Sbjct: 148 VAQENARTNQVS--VHFLESDVFQAVTGQFDLIVSNPPYISPDDTDEVGLNVLASEPHLA 205 Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDYG 254 L DG++ YR IA+ L + G EIGY Q D+ + + KD Sbjct: 206 LFAEEDGMAIYRQIAEQAGAFLKEKGKLYFEIGYKQGQDLTDLLALHFPKKRIRVLKDQF 265 Query: 255 GNDRVLLF 262 G DR ++ Sbjct: 266 GQDRKVIA 273 >gi|325689727|gb|EGD31731.1| protein-(glutamine-N5) methyltransferase [Streptococcus sanguinis SK115] Length = 276 Score = 258 bits (661), Expect = 4e-67, Method: Composition-based stats. Identities = 78/264 (29%), Positives = 123/264 (46%), Gaps = 11/264 (4%) Query: 1 MQALRDSHSF--LCRVTG-LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGW 57 + A ++ + + R LS ++ + + L + L H+ I+G Sbjct: 15 LAAGEEAENLSFVYRALNELSFTDFVLKLRTEVSQEDHKQLKAIQEQLLAHKPAQYIIGS 74 Query: 58 RDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117 DF+ + L + PRPETE LV+ L+ + + +LD+GTG+GA+ L L Sbjct: 75 SDFHGLTLKVDERVLIPRPETEELVELILSEN-----PESSLSVLDIGTGSGAIALTLAN 129 Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIES 177 P ++ D+S AL +A NA +QSD +++G FD+IVSNPPYI Sbjct: 130 SRPDWQITASDLSNDALALAAENAQ--FCRLNLAFVQSDCLDAIQGKFDIIVSNPPYISE 187 Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237 D +GL V +P ++L DG + YR IA+ +L K G +EIGY Q V Sbjct: 188 ADKDEVGLNVLTSEPHMALFAEEDGYAVYRKIAEQAGDYLTKKGKIYLEIGYKQGDGVAD 247 Query: 238 IFESR-KLFLVNAFKDYGGNDRVL 260 + + + KD G DR++ Sbjct: 248 LLKKSFPQKRIRVLKDQFGKDRMV 271 >gi|288942096|ref|YP_003444336.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Allochromatium vinosum DSM 180] gi|288897468|gb|ADC63304.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Allochromatium vinosum DSM 180] Length = 293 Score = 258 bits (661), Expect = 4e-67, Method: Composition-based stats. Identities = 94/249 (37%), Positives = 129/249 (51%), Gaps = 7/249 (2%) Query: 15 TGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEP 74 TG + ++ P+ D + R L E I I G ++F+ + L ++ DT P Sbjct: 45 TGWTRTSLLAWPERAPPDEAVATFEALLARRLTGEPIAYIRGRQEFWTLELRVTPDTLIP 104 Query: 75 RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134 RPETE LV+ AL R++ + +RI DLGTG+GA+ AL E P + V D S AL Sbjct: 105 RPETEQLVELALD----RLDAQRPLRIADLGTGSGAIAAALASERPDWSLVATDRSAAAL 160 Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPR 193 +A+ N T G+ ER L+ DW +++ G D I+SNPPY+ + R F+PR Sbjct: 161 AVARDNFRTLGL-ERIGCLRMDWLAALASGSLDAILSNPPYVAGQDPHLDRGDPR-FEPR 218 Query: 194 ISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDY 253 +L G DGL RTIA R L GL +VE G++Q V RIF S L V +D Sbjct: 219 SALTPGGDGLDAIRTIAAETGRCLRPGGLLAVEHGFDQGDAVRRIFASAGLHRVETCRDL 278 Query: 254 GGNDRVLLF 262 G DRV L Sbjct: 279 AGLDRVTLG 287 >gi|71274722|ref|ZP_00651010.1| Modification methylase HemK [Xylella fastidiosa Dixon] gi|71899597|ref|ZP_00681752.1| Modification methylase HemK [Xylella fastidiosa Ann-1] gi|71164454|gb|EAO14168.1| Modification methylase HemK [Xylella fastidiosa Dixon] gi|71730639|gb|EAO32715.1| Modification methylase HemK [Xylella fastidiosa Ann-1] Length = 275 Score = 258 bits (661), Expect = 4e-67, Method: Composition-based stats. Identities = 75/259 (28%), Positives = 120/259 (46%), Gaps = 7/259 (2%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ + L + D L + + + + ++G R F+ + + Sbjct: 19 DAEALLLYALDCDRAWLFTHGDIPLAAAATESFQALVEQRARGIPVAYLIGRRGFWTLDV 78 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 +SS T PR ETE LV+ AL R++ R+ DLGTG+GA+ LA+ E P + + Sbjct: 79 IVSSATLIPRAETETLVEQAL----QRLDHASERRVADLGTGSGAIALAIACERPQAQVL 134 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLG 184 D S AL+IA NA + ++ + +W+ ++ G FD+IVSNPPYI Sbjct: 135 ATDNSAAALDIAARNASAHRLNH-VVFREGNWYEALLGERFDLIVSNPPYIAVTDPHLTQ 193 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 ++R F+P +L G DGL R +A G HL G +E G++Q + + + L Sbjct: 194 GDLR-FEPPSALISGSDGLDALRILAAGAPAHLRPGGWLVLEHGWDQGAAMRTLLHTAGL 252 Query: 245 FLVNAFKDYGGNDRVLLFC 263 V +D DRV + Sbjct: 253 VAVATVQDLEARDRVTVGR 271 >gi|313622329|gb|EFR92816.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Listeria innocua FSL J1-023] Length = 283 Score = 258 bits (661), Expect = 4e-67, Method: Composition-based stats. Identities = 84/258 (32%), Positives = 115/258 (44%), Gaps = 10/258 (3%) Query: 7 SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66 + L GL+ ++ ++ L+ R L E + IL FY Sbjct: 25 AEILLETRMGLTRSELWMEMSRELEPNHEKQFQEDFARYLAGEPVQYILKTAPFYGYDFL 84 Query: 67 LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126 ++ D PRPETE LV +A AF ++K + +LD+ TG+G + +AL K P Sbjct: 85 VTEDVLIPRPETEELVATAEAF----LKKHPLRSLLDVCTGSGIIAIALKKAFPDITVTA 140 Query: 127 VDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183 DIS AL IAK NA+ RF D L+S F FD+IV+NPPYI + Sbjct: 141 SDISAAALAIAKKNALLLNADVRFIETDLLES--FKQNNERFDMIVANPPYISEAEKAEM 198 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE-SR 242 V +P I+L DGL+ Y D + LN VEIGY Q V ++FE S Sbjct: 199 SDYVLKNEPSIALFAENDGLAIYERFVDNLKYVLNPSFWVGVEIGYTQGERVKQLFEKSY 258 Query: 243 KLFLVNAFKDYGGNDRVL 260 V KD DR + Sbjct: 259 PHATVLIHKDINSKDRYV 276 >gi|254472106|ref|ZP_05085506.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Pseudovibrio sp. JE062] gi|211958389|gb|EEA93589.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Pseudovibrio sp. JE062] Length = 294 Score = 258 bits (661), Expect = 4e-67, Method: Composition-based stats. Identities = 87/260 (33%), Positives = 135/260 (51%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 +A D+ G+ ++++ D + +T L + + RILG R+F+ Sbjct: 31 EADLDARVLTAEALGIEPRNLVLEYDREISPEVIAVMTRYAEERLAGKPVGRILGKREFW 90 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 + +LS T EPRP+TE LV++ LAF D+GTGTGA+ +ALL E P Sbjct: 91 GLEFSLSQATLEPRPDTETLVEATLAFCQANGGFDKPWVFADIGTGTGAIAIALLSELPN 150 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181 V VDIS +ALE A+ NA NG RF ++ + ++ G FD +VSNPPYI S +++ Sbjct: 151 AICVAVDISEEALETARQNAANNGFESRFIPVRGSYLDALNGAFDFVVSNPPYIRSAVIE 210 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 L EV+ DP ++LDGG DGL+ Y+ + L ++ +EIG++Q ++ + Sbjct: 211 GLSHEVKQHDPMLALDGGDDGLTAYKELIGNAKLVLKRNSGLLMEIGFDQAEELSTLARE 270 Query: 242 RKLFLVNAFKDYGGNDRVLL 261 V D G RV++ Sbjct: 271 LVGLEVRCEHDLAGQPRVIV 290 >gi|55820817|ref|YP_139259.1| protoporphyrinogen oxidase [Streptococcus thermophilus LMG 18311] gi|55736802|gb|AAV60444.1| protoporphyrinogen oxidase [Streptococcus thermophilus LMG 18311] Length = 277 Score = 258 bits (661), Expect = 4e-67, Method: Composition-based stats. Identities = 79/247 (31%), Positives = 123/247 (49%), Gaps = 8/247 (3%) Query: 17 LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRP 76 ++ + + L + + H+ ILG+ +F+ +R + PRP Sbjct: 34 WDLTHFVLQLRQEVSEEDGDLLAHIFTQLTAHKPAQYILGYEEFHGLRFQVDERVLIPRP 93 Query: 77 ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136 ETE LVD LA + +++LD+GTG+GA+ ++L K P ++ D+S AL + Sbjct: 94 ETEELVDLILAEN-----PNTELKVLDIGTGSGAIAVSLKKSRPMWQVTASDLSADALVL 148 Query: 137 AKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL 196 AK NA N V + +D F +V G FD+IVSNPPYI D +GL V +P+++L Sbjct: 149 AKDNAKLNRVD--ISFVLADVFENVSGCFDIIVSNPPYISENDKDEVGLNVLTSEPKMAL 206 Query: 197 DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDYGG 255 DGL+ YR I + ++LN G EIGY Q D+ ++ V KD G Sbjct: 207 FADEDGLAIYRQILEDADKYLNPQGKLYFEIGYKQGEDLRKLLSLHFPDKHVRVLKDQFG 266 Query: 256 NDRVLLF 262 DR+++ Sbjct: 267 QDRMVVM 273 >gi|319760482|ref|YP_004124420.1| protein methyltransferase HemK [Candidatus Blochmannia vafer str. BVAF] gi|318039196|gb|ADV33746.1| protein methyltransferase HemK [Candidatus Blochmannia vafer str. BVAF] Length = 281 Score = 258 bits (661), Expect = 4e-67, Method: Composition-based stats. Identities = 76/262 (29%), Positives = 122/262 (46%), Gaps = 8/262 (3%) Query: 1 MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60 + D+ L +VT S Q++ ++ L +Q L I R + E I I+G ++F Sbjct: 19 LSPKLDAELLLQKVTRKSKIQLLTFGETNLSFKQIQTLQLLINRRSQGEPIAHIIGVKEF 78 Query: 61 YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120 +++ +S F PRP+TE L++ L + D V ILDLGTG G + L L E P Sbjct: 79 WSLNFKVSPGVFIPRPDTECLIEQILNLNF----NSDNVEILDLGTGVGTIALTLASERP 134 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIESV 178 + G++ +AL +A N + + + +WF ++ FD+IVSNPPYI Sbjct: 135 SWNITGIEQQKQALSLAHKN-KLLLDCKNVNFIYGNWFKYLKNSKKFDLIVSNPPYINKK 193 Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238 + L +V F+PR +L GLS I +L G +E G+NQ V + Sbjct: 194 DLHWLSKDVY-FEPRNALISKNSGLSDLMIICQYSKYYLCPSGWIFLEHGWNQGKQVRNL 252 Query: 239 FESRKLFLVNAFKDYGGNDRVL 260 ++ + DY +R+ Sbjct: 253 LSKQQFINICTKFDYNNCERIT 274 >gi|229187554|ref|ZP_04314694.1| Protein hemK [Bacillus cereus BGSC 6E1] gi|228595921|gb|EEK53601.1| Protein hemK [Bacillus cereus BGSC 6E1] Length = 283 Score = 258 bits (661), Expect = 4e-67, Method: Composition-based stats. Identities = 71/259 (27%), Positives = 113/259 (43%), Gaps = 7/259 (2%) Query: 8 HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67 LC V + ++++ + Q T I + ++ I ++G FY + Sbjct: 25 EIVLCHVLKTNRTGLLMNMREEITAEQETSFTEFIHKHVEGIPIQYMIGHEMFYGRSFFV 84 Query: 68 SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 + + PRPETE L+ L + + + D+GTG+GA+ + L E+ V Sbjct: 85 NEEVLIPRPETEELIVGVLERIERHF-GDEKLHVADIGTGSGAISITLALENKNLHVYTV 143 Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDW---FSSVEGLFDVIVSNPPYIESVIVDCLG 184 DI+ +++E+AK NA T G D F DV+VSNPPYI L Sbjct: 144 DIAQESIEVAKENAKTLGAE--VTFYHGDLLLPFYETGQKLDVVVSNPPYIPEEDWRGLS 201 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-K 243 V++ +P+ +L GG DGL YR + + L K + + EIG Q DV + + Sbjct: 202 PVVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEIGVGQGEDVKGLLQQAFP 261 Query: 244 LFLVNAFKDYGGNDRVLLF 262 V D G DR++ Sbjct: 262 HAHVEVVFDINGKDRMVFA 280 >gi|116511388|ref|YP_808604.1| methylase of polypeptide chain release factor [Lactococcus lactis subsp. cremoris SK11] gi|116107042|gb|ABJ72182.1| Methylase of polypeptide chain release factor [Lactococcus lactis subsp. cremoris SK11] Length = 271 Score = 258 bits (661), Expect = 4e-67, Method: Composition-based stats. Identities = 83/239 (34%), Positives = 121/239 (50%), Gaps = 10/239 (4%) Query: 28 SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALA 87 + D++ LT R +K+E I+GW +FY ++ + PRPETE LV+ L Sbjct: 41 EKITDQELNLLTELSERLIKNEPPQYIVGWAEFYELKFKVDERVLIPRPETEELVEMILT 100 Query: 88 FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147 + D ++ILD+GTG+GA+ ++L K + DIS ALE+A NA N V Sbjct: 101 EN-----NNDSLKILDIGTGSGAIAISLAKARQNWSVKASDISQNALELAAENAKMNHV- 154 Query: 148 ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207 + +QSD + FD+IVSNPPYI + V ++P ++L GL+ Y+ Sbjct: 155 -NLEFIQSDVMDELTDRFDIIVSNPPYIAFDETYEMDDSVIKYEPDLALFAQNQGLAIYQ 213 Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL--VNAFKDYGGNDRVLLFCR 264 IAD HL DG +EIGY Q V IF+ K V+ +D G DR++ R Sbjct: 214 KIADQAVNHLTDDGKIYLEIGYKQGKAVQAIFQE-KFTDRLVSIHQDIFGKDRMISVKR 271 >gi|227510127|ref|ZP_03940176.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227190332|gb|EEI70399.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 288 Score = 258 bits (661), Expect = 5e-67, Method: Composition-based stats. Identities = 86/260 (33%), Positives = 141/260 (54%), Gaps = 5/260 (1%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D + + G S+ +++ + Q N + R + E + I+G DFY + L Sbjct: 30 DIDFLIQKRFGFSTTDMLIHYHDRMSSGQWLQFQNDVKRLISGEPVQYIVGQADFYGLTL 89 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 + S+ PR ETE LVD L + + +++LD+GTG+GA+ +AL P ++ Sbjct: 90 NVDSNVLIPRVETEELVDWILDQT--TVYTNRPLKVLDIGTGSGAIAIALKANRPEWQVN 147 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185 DIS AL++A+ NA + V+ F + SD F+ + FD+IVSNPPYI + V + Sbjct: 148 ASDISDSALKVAQQNAQLHHVAINF--ILSDIFAHINEAFDLIVSNPPYISASEVGDMDS 205 Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF-ESRKL 244 V++ +P+I+L DGL+ Y+++A GV HLN G VEIG++Q+ V +IF E+ Sbjct: 206 SVKNNEPKIALFAADDGLAIYKSLAKGVDAHLNAGGQLFVEIGFHQEASVRKIFQEALPN 265 Query: 245 FLVNAFKDYGGNDRVLLFCR 264 +V A D G+ R++ + Sbjct: 266 AIVTAKHDVSGHQRMVQLRK 285 >gi|251799801|ref|YP_003014532.1| modification methylase, HemK family [Paenibacillus sp. JDR-2] gi|247547427|gb|ACT04446.1| modification methylase, HemK family [Paenibacillus sp. JDR-2] Length = 283 Score = 258 bits (661), Expect = 5e-67, Method: Composition-based stats. Identities = 81/280 (28%), Positives = 131/280 (46%), Gaps = 16/280 (5%) Query: 1 MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60 M+ ++ L V G+ ++ D I R E + I+G F Sbjct: 1 MEPRSNAERLLLHVLGIDRSTMLRDFGEPFPAAHAAEWVELIRRKAAGEPVQYIIGEEWF 60 Query: 61 YNVRLTLSSDTFEPRPETELLVDSALAFS--LPRIEKRDVVRILDLGTGTGAVCLALLKE 118 Y T++ T PRPETELLV++ L + L + +V ++D+GTGTGA+ + L + Sbjct: 61 YGRPFTVTPATLIPRPETELLVEAVLEAADKLWPPDGAEVPTVVDVGTGTGAIGVTLASQ 120 Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-------------EGLF 165 P ++ D+S AL +A++NA + + R +Q D + + Sbjct: 121 RPRWRVSASDLSPDALAVARTNAARHEAAGRMAFVQGDLLAPFAKRGAAGAALDAEDIRI 180 Query: 166 DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225 DV+VSNPPYI + + L EVRD++PR++LDGG DGL YR + + + + Sbjct: 181 DVLVSNPPYIPADDLPGLQPEVRDYEPRLALDGGADGLDPYRRMVGQLPSLAQLPRIVAF 240 Query: 226 EIGYNQKVDVVRIFESRK-LFLVNAFKDYGGNDRVLLFCR 264 E+G Q DV + + + DYGG +R ++ R Sbjct: 241 ELGMGQARDVAALLRNVGEWDDIRIITDYGGIERHVIAVR 280 >gi|149197696|ref|ZP_01874746.1| Methyltransferase [Lentisphaera araneosa HTCC2155] gi|149139266|gb|EDM27669.1| Methyltransferase [Lentisphaera araneosa HTCC2155] Length = 282 Score = 258 bits (661), Expect = 5e-67, Method: Composition-based stats. Identities = 69/261 (26%), Positives = 119/261 (45%), Gaps = 10/261 (3%) Query: 7 SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66 + + + + + D L + + + + R +HE + I G +FY + ++ Sbjct: 27 AEWIISDSLNIKRLDLYLQHDRPLSESELSSIREKLQRCARHEPVQYICGSTNFYGLEIS 86 Query: 67 LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF-FKGV 125 + PRPETE LVD A ++ ++LDL TG+G + +A+ ++ V Sbjct: 87 VGPGVLIPRPETECLVDLATKHI------KEGQKLLDLCTGSGCIPIAIQEQKKQSLSIV 140 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVDCL 183 DI KAL A+ N N ++ + LQ D F+ + + FD+I SNPPY+ + Sbjct: 141 ACDIEEKALNYAQENITQNK-TQNIELLQCDLFAKIANDIKFDLITSNPPYVSESERPEM 199 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 G +V +P +L DG++ IA +++ +EIG +Q + +FE+ Sbjct: 200 GKDVLKHEPPSALFADHDGMAIIERIAQEAPQYMEPKAYILIEIGASQGSRCLELFEASN 259 Query: 244 LFLVNAFKDYGGNDRVLLFCR 264 V KDY DR+L R Sbjct: 260 YRNVEVVKDYSSRDRILKAQR 280 >gi|145220120|ref|YP_001130829.1| HemK family modification methylase [Prosthecochloris vibrioformis DSM 265] gi|145206284|gb|ABP37327.1| modification methylase, HemK family [Chlorobium phaeovibrioides DSM 265] Length = 294 Score = 258 bits (661), Expect = 5e-67, Method: Composition-based stats. Identities = 73/265 (27%), Positives = 124/265 (46%), Gaps = 11/265 (4%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 +A + L +V GL ++ ++ + + + L+ + I G + FY Sbjct: 29 EARIGAEMLLSQVLGLKRIELYLNYQRPVYPDELERFRRLCRQRLEGRPVQYIAGEQFFY 88 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 ++ + PRPETELLV+ AL F +E R++D+GTG+G + + + + Sbjct: 89 GLQFHVDERVLIPRPETELLVEHALGF----LENTQSARVMDIGTGSGCIAVTMALRNAS 144 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS------VEGLFDVIVSNPPYI 175 +D S +AL +A+ NA+ + V +R ++D F G + +IVSNPPYI Sbjct: 145 LVLDALDCSVEALAVARGNALAHKVQDRVRFHEADIFRDSFTAPFSAGTYSLIVSNPPYI 204 Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235 + L EVR+++PR++L G+ YR IA L +G+ E+ V Sbjct: 205 PDAEWELLQREVREYEPRLALTT-PTGMECYRAIAGHAGELLKPEGVLCFEVHAEGAAAV 263 Query: 236 VRIFESRKLFLVNAFKDYGGNDRVL 260 I +S + KDY G DR++ Sbjct: 264 GAIMDSSGFSAITVTKDYSGLDRIV 288 >gi|148988473|ref|ZP_01819920.1| HemK protein [Streptococcus pneumoniae SP6-BS73] gi|147926154|gb|EDK77228.1| HemK protein [Streptococcus pneumoniae SP6-BS73] Length = 279 Score = 258 bits (661), Expect = 5e-67, Method: Composition-based stats. Identities = 77/248 (31%), Positives = 119/248 (47%), Gaps = 9/248 (3%) Query: 16 GLSSHQVIVDPDSVLD-DRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEP 74 LS I + + ++ F+ + + H+ I+G DFY + L + P Sbjct: 33 NLSFTDFIFALQQEVTTEEEKQFVEDIYQQLAAHKPAQYIIGQADFYGMHLKVDERVLIP 92 Query: 75 RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134 RPETE LV+ L +L + +LD+GTG+GA+ LAL K P + D+S +AL Sbjct: 93 RPETEELVELILTENLET-----NLSVLDIGTGSGAIALALAKNRPDWSVTAADVSQEAL 147 Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194 E+A NA + +SD F+ + +D+IVSNPPYI +GL V +P + Sbjct: 148 ELASENASNQNL--NIFFKKSDCFAEISEKYDIIVSNPPYISREDESEVGLNVLHSEPHL 205 Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDY 253 ++ DGL+ Y IA+ +L G +EIGY Q V +F V KD Sbjct: 206 AIFADEDGLAIYCRIAEDAKDYLKDGGKIYLEIGYKQGQSVPELFRKHLPEKRVRTLKDQ 265 Query: 254 GGNDRVLL 261 G +R+++ Sbjct: 266 FGQNRMVV 273 >gi|304394128|ref|ZP_07376051.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Ahrensia sp. R2A130] gi|303293568|gb|EFL87945.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Ahrensia sp. R2A130] Length = 283 Score = 258 bits (661), Expect = 5e-67, Method: Composition-based stats. Identities = 96/257 (37%), Positives = 131/257 (50%), Gaps = 5/257 (1%) Query: 7 SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66 + + + VTG + V+V D + N + + + R +G R+F+ + Sbjct: 30 ARAIMAHVTGDDAGMVMVREDVAFNAADAAVFQNLVQKVASGTPLFRAIGVREFHGLDFA 89 Query: 67 LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126 LS DT EPR +TE L+++ L+ S P R DLGTG+G V ++LL E V Sbjct: 90 LSKDTLEPRDDTEALIEAVLSQSPPAKS-----RFSDLGTGSGIVAISLLHELSEATAVA 144 Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLE 186 DIS AL+ A +NA NGV ER T Q W +EG FD +VSNPPYI S IVD L Sbjct: 145 TDISAGALQTATANAARNGVGERLSTAQGSWCEPLEGAFDFMVSNPPYIASDIVDGLDQS 204 Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246 V D DPR +LDGG GL YR I L G ++EIGY+Q V + + Sbjct: 205 VLDHDPRRALDGGETGLEAYREILSQAGSLLRPGGFLALEIGYDQAEAVTALAQQTGWRR 264 Query: 247 VNAFKDYGGNDRVLLFC 263 + + D G+DR L+F Sbjct: 265 LALYHDLQGHDRALVFA 281 >gi|170730036|ref|YP_001775469.1| protoporphyrinogen oxidase [Xylella fastidiosa M12] gi|167964829|gb|ACA11839.1| protoporphyrinogen oxidase [Xylella fastidiosa M12] Length = 275 Score = 258 bits (661), Expect = 5e-67, Method: Composition-based stats. Identities = 75/259 (28%), Positives = 121/259 (46%), Gaps = 7/259 (2%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ + L + D L + + + + ++G R F+ + + Sbjct: 19 DAEALLLYALDCDRAWLFTHGDIPLAAAATESFQALVEQRARGIPVAYLIGRRGFWTLDV 78 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 +SS T PR ETE LV+ AL R++ R+ DLGTG+GA+ LA+ E P + + Sbjct: 79 IVSSATLIPRAETETLVEQAL----QRLDHASERRVADLGTGSGAIALAIACERPQAQVL 134 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLG 184 D S AL+IA NA + ++ + +W+ ++ G FD+IVSNPPYI + Sbjct: 135 ATDNSAAALDIAARNASAHRLNH-VVFREGNWYEALLGERFDLIVSNPPYIAVTDLHLTQ 193 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 ++R F+P +L G DGL R +A G HL G +E G++Q + + + L Sbjct: 194 GDLR-FEPPSALISGSDGLDALRILAAGAPAHLRPGGWLVLEHGWDQGAAMRTLLHTAGL 252 Query: 245 FLVNAFKDYGGNDRVLLFC 263 V +D DRV + Sbjct: 253 VAVATVQDLEARDRVTVGR 271 >gi|167582489|ref|ZP_02375363.1| hemK protein [Burkholderia thailandensis TXDOH] Length = 285 Score = 258 bits (661), Expect = 5e-67, Method: Composition-based stats. Identities = 79/261 (30%), Positives = 122/261 (46%), Gaps = 11/261 (4%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L G S Q+I D LD R E + ++ G R+F+ + Sbjct: 24 DARILLAHALGWSRTQLITRADEPLDAAAIERYLALEARRAAGEPVAQLTGAREFFGLEF 83 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 ++ D PRPETELLV++AL I+ +LDLGTG+GA+ +++ P + Sbjct: 84 DVTPDVLIPRPETELLVETALD----AIDGIASPCVLDLGTGSGAIAVSIASVRPDARVW 139 Query: 126 GVDISCKALEIAKSNAVTNGVSER----FDTLQSDWFSSVEG--LFDVIVSNPPYIESVI 179 +D S AL++A+ NA R L+SDW+++++ F V+VSNPPYI Sbjct: 140 ALDRSAAALDVARRNARKLLDPARAGGPLRFLESDWYAALDPGLRFHVVVSNPPYIARHD 199 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 ++R F+PR +L DGL+ RTI G + G +E GY+Q V + Sbjct: 200 PHLAEGDLR-FEPRGALTDEDDGLAAIRTIVAGAHAFVAPGGALWIEHGYDQAAAVRALL 258 Query: 240 ESRKLFLVNAFKDYGGNDRVL 260 E+ V + D +R Sbjct: 259 EAAGFADVESLADLASIERAT 279 >gi|300172697|ref|YP_003771862.1| protein methyltransferase prmC [Leuconostoc gasicomitatum LMG 18811] gi|299887075|emb|CBL91043.1| Protein methyltransferase prmC [Leuconostoc gasicomitatum LMG 18811] Length = 335 Score = 258 bits (660), Expect = 5e-67, Method: Composition-based stats. Identities = 83/264 (31%), Positives = 129/264 (48%), Gaps = 9/264 (3%) Query: 3 ALRDSH----SFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWR 58 D+ L ++ + + + + + + +E + ILG Sbjct: 70 PKEDAQDNVDFLLSGALNINYAYLRANITRTMPSDLAAIWPKWLAKLMNNEPVQYILGHA 129 Query: 59 DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118 FY + S PRPETE LV+ L + + V +LD+GTGTGA+ L+ E Sbjct: 130 PFYGREFMVDSRVLIPRPETEQLVEWILKDAGS--KNGKPVSVLDIGTGTGAIIETLMLE 187 Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIES 177 +P +G DIS AL +A+ NA G+ +QSD +S+VEGL FD+IVSNPPYI + Sbjct: 188 NPRVRGFAADISSGALAVAEMNAQRFGL-NYLHLVQSDVYSAVEGLEFDIIVSNPPYIAT 246 Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237 D + V +++P +L DGL+ Y IA ++ +L+ +G EIGY Q VV Sbjct: 247 TDEDEMADNVLEYEPHTALFADHDGLAIYEKIAADLALYLSDNGRAYFEIGYKQGQQVVS 306 Query: 238 IFE-SRKLFLVNAFKDYGGNDRVL 260 + + + V KD+ G DR++ Sbjct: 307 MMQHALPQAEVTLKKDFSGLDRMV 330 >gi|168491916|ref|ZP_02716059.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptococcus pneumoniae CDC0288-04] gi|183573762|gb|EDT94290.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptococcus pneumoniae CDC0288-04] Length = 279 Score = 258 bits (660), Expect = 5e-67, Method: Composition-based stats. Identities = 79/248 (31%), Positives = 120/248 (48%), Gaps = 9/248 (3%) Query: 16 GLSSHQVIVDPDSVLD-DRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEP 74 LS I + + ++ F+ + + H+ I+G DFY + L + P Sbjct: 33 NLSFTDFIFALQQEVTTEEEKQFVEDIYQQLAAHKPAQYIIGQADFYGMHLKVDERVLIP 92 Query: 75 RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134 RPETE LV+ L +L + +LD+GTG+GA+ LAL K P + D+S +AL Sbjct: 93 RPETEELVELILTENLET-----NLSVLDIGTGSGAIALALAKNRPAWSVTAADVSQEAL 147 Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194 E+A NA + +SD F+ + +D+IVSNPPYI +GL V +P + Sbjct: 148 ELASENASDQNL--NIFFKKSDCFAEISEKYDIIVSNPPYISREDESEVGLNVLHSEPHL 205 Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDY 253 +L DGL+ Y IA+ + +L G +EIGY Q V +F V KD Sbjct: 206 ALFADEDGLAIYCRIAEDATDYLKDSGKIYLEIGYKQGQSVPELFRKHLPEKRVRTLKDQ 265 Query: 254 GGNDRVLL 261 G DR+++ Sbjct: 266 FGQDRMVV 273 >gi|229170036|ref|ZP_04297728.1| Protein hemK [Bacillus cereus AH621] gi|228613461|gb|EEK70594.1| Protein hemK [Bacillus cereus AH621] Length = 283 Score = 258 bits (660), Expect = 5e-67, Method: Composition-based stats. Identities = 71/259 (27%), Positives = 112/259 (43%), Gaps = 7/259 (2%) Query: 8 HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67 LC V + ++++ + Q I + ++ I +LG+ FY + Sbjct: 25 EIVLCHVLKTNRTGMLMNMREEITAEQEKSFEEFIHKHVEGIPIQYMLGYEMFYGRSFFV 84 Query: 68 SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 + + PRPETE L+ L + + I D+GTG+GA+ + L E+ V Sbjct: 85 NEEVLIPRPETEELIVGVLERIERHFGNEE-LHIADIGTGSGAISITLALENKNLHVYTV 143 Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVIVDCLG 184 DI+ +++E+AK NA T G D S DV+VSNPPYI L Sbjct: 144 DIAQESIEVAKENAKTLGAD--VTFYHGDLLSPFYETGQKLDVVVSNPPYIPEEDWRGLS 201 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-K 243 V++ +P+ +L GG DGL YR + + L + + EIG Q DV + + Sbjct: 202 TVVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQNKAIVAFEIGVGQGEDVKALLQQTFP 261 Query: 244 LFLVNAFKDYGGNDRVLLF 262 V D G DR++ Sbjct: 262 RAQVEVVFDINGKDRMVFA 280 >gi|125623425|ref|YP_001031908.1| putative protoporphyrinogen oxidase [Lactococcus lactis subsp. cremoris MG1363] gi|124492233|emb|CAL97162.1| putative protoporphyrinogen oxidase [Lactococcus lactis subsp. cremoris MG1363] gi|300070172|gb|ADJ59572.1| putative protoporphyrinogen oxidase [Lactococcus lactis subsp. cremoris NZ9000] Length = 270 Score = 258 bits (660), Expect = 6e-67, Method: Composition-based stats. Identities = 82/235 (34%), Positives = 120/235 (51%), Gaps = 10/235 (4%) Query: 28 SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALA 87 + D++ LT R +K+E I+GW +FY ++ + PRPETE LV+ L Sbjct: 41 EKITDQELNLLTELSERLIKNEPPQYIVGWAEFYELKFKVDERVLIPRPETEELVEMILT 100 Query: 88 FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147 + D ++ILD+GTG+GA+ ++L K + DIS ALE+A NA N V Sbjct: 101 EN-----NNDSLKILDIGTGSGAIAISLAKARQNWSVKASDISQNALELAAENAKMNHV- 154 Query: 148 ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207 + +QSD + FD+IVSNPPYI + V ++P ++L GL+ Y+ Sbjct: 155 -NLEFIQSDVMDELTDRFDIIVSNPPYIAFDETYEMDDSVIKYEPDLALFAKNQGLAIYQ 213 Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL--VNAFKDYGGNDRVL 260 IAD HL DG +EIGY Q V IF+ K V+ +D G DR++ Sbjct: 214 KIADQAVNHLTDDGKIYLEIGYKQGKAVQAIFQE-KFTDRLVSIHQDIFGKDRMI 267 >gi|290892705|ref|ZP_06555697.1| modification methylase [Listeria monocytogenes FSL J2-071] gi|290557765|gb|EFD91287.1| modification methylase [Listeria monocytogenes FSL J2-071] Length = 283 Score = 258 bits (660), Expect = 6e-67, Method: Composition-based stats. Identities = 81/256 (31%), Positives = 114/256 (44%), Gaps = 6/256 (2%) Query: 7 SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66 + L GLS ++ ++ + L+ R L E + IL FY Sbjct: 25 AEILLETRMGLSRSELWMEINRELEPNHEKQFEEDFARYLAGEPVQYILKTAPFYGYDFL 84 Query: 67 LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126 ++ D PRPETE LV A + ++K V +LD+ TG+G + +AL K P Sbjct: 85 VTEDVLIPRPETEELV----ACAEDFLKKHPVKNVLDVCTGSGIIAIALKKAFPEISMTA 140 Query: 127 VDISCKALEIAKSNAVTNGVSERF-DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185 DIS AL +AK NA+ RF +T + F E FD+IV+NPPYI + Sbjct: 141 SDISAPALAVAKKNALLLNADVRFVETDLLEAFKQNEERFDMIVANPPYISEAEKAEMSD 200 Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE-SRKL 244 V +P ++L DGL+ Y D + LN VEIGY Q V ++FE S Sbjct: 201 YVLKNEPSLALFAENDGLAIYERFVDNLQYVLNSSFWVGVEIGYTQGERVKQLFEKSYPH 260 Query: 245 FLVNAFKDYGGNDRVL 260 V KD DR + Sbjct: 261 STVIIHKDINSKDRYV 276 >gi|325971907|ref|YP_004248098.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Spirochaeta sp. Buddy] gi|324027145|gb|ADY13904.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Spirochaeta sp. Buddy] Length = 286 Score = 258 bits (660), Expect = 6e-67, Method: Composition-based stats. Identities = 83/257 (32%), Positives = 123/257 (47%), Gaps = 7/257 (2%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 D+ L +VTG + I+ D VL D Q LT+ L H+ + ILG R+FY Sbjct: 27 LDARLLLQQVTGFDQAKQILFFDKVLTDAQLDSLTSLRKVRLSHKPMAYILGRREFYGRD 86 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 + PR +TE L+++ LAF+ K D I+D+ TG+G + + L E Sbjct: 87 FQVDERVLIPRSDTETLIEAVLAFAK---NKTDTPSIIDVCTGSGCIGITLALELGSA-V 142 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184 D+S AL +A+ NA VS L D S + +D+IVSNPPY+ + D + Sbjct: 143 TLTDLSEGALAVARENARRL-VSRPLTFLHGDLLSPTDKKYDIIVSNPPYLTASWCDEVA 201 Query: 185 LEVRDFDPRISLDGGI-DGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 EV ++PR++L+G DGL R + HL G +E Y Q V ++ S + Sbjct: 202 FEV-QWEPRLALEGFSLDGLELIRALVAQSLDHLAAGGALFLECDYRQAETVKQLLVSSR 260 Query: 244 LFLVNAFKDYGGNDRVL 260 V KD G +RV+ Sbjct: 261 FTNVRIEKDLAGRERVV 277 >gi|294010050|ref|YP_003543510.1| methylase of polypeptide chain release factors [Sphingobium japonicum UT26S] gi|292673380|dbj|BAI94898.1| methylase of polypeptide chain release factors [Sphingobium japonicum UT26S] Length = 275 Score = 258 bits (660), Expect = 6e-67, Method: Composition-based stats. Identities = 87/261 (33%), Positives = 131/261 (50%), Gaps = 11/261 (4%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 D+ L + + +++ D I R L E I I G RDF+ Sbjct: 21 PRLDAELLLAHALRIDRNTLLLRQR---DLSVPPGFDALIQRRLTGEPIAYITGTRDFWT 77 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L ++ D PRP++E L+++AL PR RILDLGTG+GA+ LA L + P Sbjct: 78 ISLHVTPDVLIPRPDSETLIEAALDHFGPR----SPARILDLGTGSGALLLAALSQWPQA 133 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182 G GVDIS A+ +A+ NA G+ R + DW + G FD+I+ NPPYI Sbjct: 134 TGTGVDISPAAVAVAQGNADRLGLGGRANFRLGDWAEGMGGPFDLILVNPPYIARD--AA 191 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 L +V +P +L G +GL YR IA + R L G+ ++EIG++Q++ V + + Sbjct: 192 LAGDVL-HEPETALFAGAEGLDDYRRIAPALPRLLAPGGMAAMEIGHDQRLSVSALLADQ 250 Query: 243 KLFLVNAFKDYGGNDRVLLFC 263 L V+ +D G+DR L+ Sbjct: 251 GL-GVSPRRDLAGHDRCLVAT 270 >gi|226225090|ref|YP_002759197.1| protoporphyrinogen oxidase [Listeria monocytogenes Clip81459] gi|225877552|emb|CAS06266.1| Putative protoporphyrinogen oxidase [Listeria monocytogenes serotype 4b str. CLIP 80459] Length = 283 Score = 258 bits (659), Expect = 7e-67, Method: Composition-based stats. Identities = 81/256 (31%), Positives = 114/256 (44%), Gaps = 6/256 (2%) Query: 7 SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66 + L GLS ++ ++ + L+ R L E + IL FY Sbjct: 25 AEILLETRMGLSRSELWMEINRELEPNHEKQFEKDFARYLAGEPVQYILKTAPFYGYDFL 84 Query: 67 LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126 ++ D PRPETE LV A + ++K V +LD+ TG+G + +AL K P Sbjct: 85 VTEDVLIPRPETEELV----ACAEDFLKKHSVKNVLDVCTGSGIIAIALKKAFPDISMTA 140 Query: 127 VDISCKALEIAKSNAVTNGVSERF-DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185 DIS AL +AK NA+ RF +T + F E FD+IV+NPPYI + Sbjct: 141 SDISAPALAVAKKNALLLNADVRFVETDLLEAFKQNEERFDMIVANPPYISEAEKAEMSD 200 Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE-SRKL 244 V +P ++L DGL+ Y D + LN VEIGY Q V ++FE S Sbjct: 201 YVLKNEPSLALFAENDGLAIYERFVDNLQYVLNSSFWVGVEIGYTQGERVKQLFEKSYPH 260 Query: 245 FLVNAFKDYGGNDRVL 260 V KD DR + Sbjct: 261 STVIIHKDINSKDRYV 276 >gi|218660371|ref|ZP_03516301.1| protoporphyrinogen oxidase (methyltransferase) protein [Rhizobium etli IE4771] Length = 215 Score = 258 bits (659), Expect = 7e-67, Method: Composition-based stats. Identities = 107/213 (50%), Positives = 141/213 (66%) Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110 +HRILG R+FY + L LS++T EPRP+TE+LVD+ LA+ + + ILD+GTGTGA Sbjct: 1 MHRILGEREFYGLPLQLSAETREPRPDTEILVDTVLAYLKDLAKVHGHLHILDIGTGTGA 60 Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170 +CLALL E P G+G DIS AL A+SNA NG+ +RF +QS WF ++G F IVS Sbjct: 61 ICLALLSECPEASGIGSDISADALGTARSNAERNGLQDRFQAVQSRWFEDIQGSFHAIVS 120 Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230 NPPYI S ++ L EV FDP +LDGG DGL Y IA +R + DG+ +EIGY+ Sbjct: 121 NPPYIASNVIHDLAPEVTKFDPVAALDGGPDGLDAYHAIAKDAARFMRPDGVLGLEIGYD 180 Query: 231 QKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFC 263 Q+ DV IFE++ + + KDYG NDR L+F Sbjct: 181 QRNDVTAIFEAKGFSCLKSVKDYGQNDRALIFA 213 >gi|90961567|ref|YP_535483.1| peptide release factor-glutamine N5-methyltransferase [Lactobacillus salivarius UCC118] gi|90820761|gb|ABD99400.1| Peptide release factor-glutamine N5-methyltransferase [Lactobacillus salivarius UCC118] Length = 279 Score = 258 bits (659), Expect = 7e-67, Method: Composition-based stats. Identities = 85/258 (32%), Positives = 129/258 (50%), Gaps = 7/258 (2%) Query: 4 LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63 L D +C Q++++ + +DD+ L I + + ++G++DFY + Sbjct: 24 LEDVDYLICGQMVWDKTQLLMNYRTRIDDKNYQELQEKIELYNQDYPLQYLIGYQDFYGL 83 Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 RL ++ DT PRPETE LVD L + K + +LD+GTGTGA+ LAL + Sbjct: 84 RLKVTKDTLIPRPETEELVDWILNDN----SKNENYDVLDVGTGTGAIGLALKSIRSNWN 139 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183 DIS AL++AK NA + F T SD F +EG D+IVSNPPYI + Sbjct: 140 IFLSDISEPALKVAKENAQNLNLDVSFST--SDLFEKIEGKKDIIVSNPPYISENEKIYM 197 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR- 242 V +++P +L +GL Y IA+ + L + +EIG+ Q V +IF+ Sbjct: 198 DKSVLNYEPHQALFAKNNGLEIYERIANESGKLLKQGSKIYMEIGFLQGEAVKKIFKDSF 257 Query: 243 KLFLVNAFKDYGGNDRVL 260 + KD GNDR++ Sbjct: 258 PNSEITLKKDINGNDRMI 275 >gi|217963354|ref|YP_002349032.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Listeria monocytogenes HCC23] gi|217332624|gb|ACK38418.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Listeria monocytogenes HCC23] gi|307572069|emb|CAR85248.1| modification methylase, HemK family [Listeria monocytogenes L99] Length = 283 Score = 258 bits (659), Expect = 7e-67, Method: Composition-based stats. Identities = 80/256 (31%), Positives = 114/256 (44%), Gaps = 6/256 (2%) Query: 7 SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66 + L GLS ++ ++ + L+ R L E + IL FY Sbjct: 25 AEILLETRMGLSRSELWMEINRELEPNHEKQFEEDFARYLAGEPVQYILKTAPFYGYDFL 84 Query: 67 LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126 ++ D PRPETE LV A + ++K V +LD+ TG+G + +AL K P Sbjct: 85 VTEDVLIPRPETEELV----ACAEDFLKKHSVKNVLDVCTGSGIIAIALKKAFPEISMTA 140 Query: 127 VDISCKALEIAKSNAVTNGVSERF-DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185 DIS AL +AK NA+ RF +T + F E FD+IV+NPPYI + Sbjct: 141 SDISAPALAVAKKNALLLNADVRFVETDLLEAFKQNEERFDMIVANPPYISEAEKAEMSD 200 Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE-SRKL 244 V +P ++L DGL+ Y D + LN VEIGY Q V ++FE S Sbjct: 201 YVLKNEPSLALFAENDGLAIYERFVDNLKYVLNSSFWVGVEIGYTQGERVKQLFEKSYPH 260 Query: 245 FLVNAFKDYGGNDRVL 260 + KD DR + Sbjct: 261 STIIIHKDINSKDRYV 276 >gi|322421624|ref|YP_004200847.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Geobacter sp. M18] gi|320128011|gb|ADW15571.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Geobacter sp. M18] Length = 286 Score = 258 bits (659), Expect = 7e-67, Method: Composition-based stats. Identities = 80/261 (30%), Positives = 121/261 (46%), Gaps = 10/261 (3%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 ++ LC L + ++ D L D + + + R K E + ILG ++F Sbjct: 28 NPRLEAEWMLCEALSLDRVGLYLNFDKPLSDAELAAYRSMVARRGKREPLQYILGTQEFM 87 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 + ++ PR +TE+LV A+ +LD+G G+G V +AL K P Sbjct: 88 GLEFQVTPAVLIPRHDTEVLVTEAVKRGAVARS------VLDIGAGSGCVAVALAKALPP 141 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIV 180 + VD+S +ALE+A+ NA NG + Q F G FD++VSNPPYI + + Sbjct: 142 AEICSVDVSGEALEVARGNAERNGAT--VHFFQGSLFEPFAGRHFDMVVSNPPYIPNYEL 199 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 L EVR F+P +LDGG DGL YR I +LN G E+G Q V+ + + Sbjct: 200 ATLQAEVRGFEPMGALDGGGDGLDFYRRIISDAPGYLNPGGWLIFEVGAGQAPQVLGLLQ 259 Query: 241 SRKLFLVNAFK-DYGGNDRVL 260 S + D +RV+ Sbjct: 260 SGGFTGETFTQTDPAAIERVV 280 >gi|46908714|ref|YP_015103.1| HemK family modification methylase [Listeria monocytogenes serotype 4b str. F2365] gi|46881986|gb|AAT05280.1| modification methylase, HemK family [Listeria monocytogenes serotype 4b str. F2365] Length = 283 Score = 258 bits (659), Expect = 7e-67, Method: Composition-based stats. Identities = 81/256 (31%), Positives = 113/256 (44%), Gaps = 6/256 (2%) Query: 7 SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66 + L GLS ++ ++ L+ R L E + IL FY Sbjct: 25 AEILLETRMGLSRSELWMEISRELEPNHEKQFEEDFARYLAGEPVQYILKTAPFYGYDFL 84 Query: 67 LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126 ++ D PRPETE LV A + ++K V +LD+ TG+G + +AL K P Sbjct: 85 VTEDVLIPRPETEELV----ACAEDFLKKHPVKNVLDVCTGSGIIAIALKKAFPDISMTA 140 Query: 127 VDISCKALEIAKSNAVTNGVSERF-DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185 DIS AL +AK NA+ RF +T + F E FD+IV+NPPYI + Sbjct: 141 SDISAPALAVAKKNALLLNADVRFVETDLLEAFKQNEERFDMIVANPPYISEAEKAEMSD 200 Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE-SRKL 244 V +P ++L DGL+ Y D + LN VEIGY Q V ++FE S Sbjct: 201 YVLKNEPSLALFAENDGLAIYERFVDNLQYVLNSSFWVGVEIGYTQGERVKQLFEKSYPH 260 Query: 245 FLVNAFKDYGGNDRVL 260 V KD DR + Sbjct: 261 STVIIHKDINSKDRYV 276 >gi|254825335|ref|ZP_05230336.1| modification methylase [Listeria monocytogenes FSL J1-194] gi|254932216|ref|ZP_05265575.1| modification methylase [Listeria monocytogenes HPB2262] gi|255519762|ref|ZP_05386999.1| HemK family modification methylase [Listeria monocytogenes FSL J1-175] gi|293583771|gb|EFF95803.1| modification methylase [Listeria monocytogenes HPB2262] gi|293594578|gb|EFG02339.1| modification methylase [Listeria monocytogenes FSL J1-194] gi|328465146|gb|EGF36414.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Listeria monocytogenes 1816] gi|328471150|gb|EGF42054.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Listeria monocytogenes 220] gi|332312972|gb|EGJ26067.1| Modification methylase [Listeria monocytogenes str. Scott A] Length = 283 Score = 258 bits (659), Expect = 8e-67, Method: Composition-based stats. Identities = 81/256 (31%), Positives = 113/256 (44%), Gaps = 6/256 (2%) Query: 7 SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66 + L GLS ++ ++ L+ R L E + IL FY Sbjct: 25 AEILLETRMGLSRSELWMEISRELEPNHEKQFEEDFARYLAGEPVQYILKTAPFYGYDFL 84 Query: 67 LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126 ++ D PRPETE LV A + ++K V +LD+ TG+G + +AL K P Sbjct: 85 VTEDVLIPRPETEELV----ACAEDFLKKHPVKNVLDVCTGSGIIAIALKKAFPDISMTA 140 Query: 127 VDISCKALEIAKSNAVTNGVSERF-DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185 DIS AL +AK NA+ RF +T + F E FD+IV+NPPYI + Sbjct: 141 SDISAPALAVAKKNALLLNADVRFVETDLLEAFKQNEERFDMIVANPPYISEAEKAEMSD 200 Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE-SRKL 244 V +P ++L DGL+ Y D + LN VEIGY Q V ++FE S Sbjct: 201 YVLKNEPSLALFAENDGLAIYERFVDNLQYVLNSSFWVGVEIGYTQGERVKQLFEKSYPH 260 Query: 245 FLVNAFKDYGGNDRVL 260 V KD DR + Sbjct: 261 STVIIHKDINSKDRYV 276 >gi|224500714|ref|ZP_03669063.1| hypothetical protein LmonF1_13996 [Listeria monocytogenes Finland 1988] Length = 283 Score = 258 bits (659), Expect = 8e-67, Method: Composition-based stats. Identities = 80/256 (31%), Positives = 113/256 (44%), Gaps = 6/256 (2%) Query: 7 SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66 + L GLS ++ ++ L+ R L E + IL FY Sbjct: 25 AEILLETRMGLSRSELWMEISRELEPNHEKQFEEDFARYLAGEPVQYILKTAPFYGYDFL 84 Query: 67 LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126 ++ D PRPETE LV A + ++K V +LD+ TG+G + +AL K P Sbjct: 85 VTEDVLIPRPETEELV----ACAEDFLKKHPVKNVLDVCTGSGIIAIALKKAFPEISMTA 140 Query: 127 VDISCKALEIAKSNAVTNGVSERF-DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185 DIS AL +A+ NA+ RF +T + F E FD+IV+NPPYI + Sbjct: 141 SDISAPALVVARKNALLLNADVRFVETDLLEAFKQNEERFDMIVANPPYISEAEKAEMSD 200 Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE-SRKL 244 V +P ++L DGL+ Y D + LN VEIGY Q V ++FE S Sbjct: 201 YVLKNEPSLALFAENDGLAIYERFVDNLKYVLNSSFWVGVEIGYTQGERVKQLFEKSYPH 260 Query: 245 FLVNAFKDYGGNDRVL 260 V KD DR + Sbjct: 261 TTVVIHKDINSKDRYV 276 >gi|194016564|ref|ZP_03055178.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacillus pumilus ATCC 7061] gi|194012037|gb|EDW21605.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacillus pumilus ATCC 7061] Length = 294 Score = 258 bits (659), Expect = 8e-67, Method: Composition-based stats. Identities = 74/266 (27%), Positives = 115/266 (43%), Gaps = 9/266 (3%) Query: 2 QALRD---SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWR 58 +A RD + L V LS +++ L + Q + + + K + + G Sbjct: 21 EAGRDQNAAELLLMHVLDLSRSELLARFHDQLPEEQDRLFSEFVKQHKKGVPVQHLTGIE 80 Query: 59 DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118 FY ++ PRPETE +V +AL ++ +D+GTG+GA+ + L E Sbjct: 81 FFYGRPFEVNKHVLIPRPETEEVVLAALNLMSDIFPHDQPLQAVDVGTGSGAIAITLALE 140 Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG---LFDVIVSNPPYI 175 DIS +AL +AK N G LQ D ++ D+ +SNPPYI Sbjct: 141 KETLSVTATDISHEALAVAKRNQQALGAD--VHFLQGDLLEPIKDQGIKVDLFISNPPYI 198 Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235 + +D L V +P +L G DGL Y+ + + L+K + EIG+ Q DV Sbjct: 199 SAEEMDSLSEVVTKHEPVNALTDGRDGLWFYKRLIRDLHHVLHKQAVVVFEIGHTQGQDV 258 Query: 236 VR-IFESRKLFLVNAFKDYGGNDRVL 260 + +S V KD G DR + Sbjct: 259 KALLLQSFPAADVRIVKDINGKDRAV 284 >gi|170746588|ref|YP_001752848.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Methylobacterium radiotolerans JCM 2831] gi|170653110|gb|ACB22165.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Methylobacterium radiotolerans JCM 2831] Length = 299 Score = 258 bits (659), Expect = 8e-67, Method: Composition-based stats. Identities = 106/263 (40%), Positives = 144/263 (54%), Gaps = 3/263 (1%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 +A D+ L + GL + +++D L L A+ R L E + RILG +F+ Sbjct: 29 EAAGDARFLLLGILGLETRDLLIDGSRRLGPADAASLAAALARRLAGEPVARILGAWEFW 88 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 + L DT PRP+TE+LV+ ALA R ++ +R LDLGTG+G + ALL E P Sbjct: 89 GLPFRLGPDTLVPRPDTEILVEVALA---ARPDRAAPLRCLDLGTGSGCILTALLSERPR 145 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181 GVG+D S AL +A+ NAVTNGV +R + DW ++ G FD++VSNPPYI ++ Sbjct: 146 ATGVGLDRSEGALRVARDNAVTNGVGDRARFVAGDWCDALWGCFDLVVSNPPYIARAVIG 205 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 L EVR DP +LDGG DGL YR I G L GL +EIGY+Q V + + Sbjct: 206 TLEREVRGHDPAAALDGGADGLEAYRRILGGAGACLATGGLLVLEIGYDQAAAVTDLARA 265 Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264 +D G+DRVL F R Sbjct: 266 AGYRARGLTRDLAGHDRVLSFDR 288 >gi|53717071|ref|YP_105274.1| hemK protein [Burkholderia mallei ATCC 23344] gi|67639916|ref|ZP_00438744.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Burkholderia mallei GB8 horse 4] gi|121597316|ref|YP_990283.1| methyltransferase, HemK family protein [Burkholderia mallei SAVP1] gi|124381896|ref|YP_001024782.1| methyltransferase, HemK family protein [Burkholderia mallei NCTC 10229] gi|126446694|ref|YP_001079121.1| protein hemK [Burkholderia mallei NCTC 10247] gi|167003350|ref|ZP_02269136.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Burkholderia mallei PRL-20] gi|254175844|ref|ZP_04882503.1| protein hemK [Burkholderia mallei ATCC 10399] gi|254203238|ref|ZP_04909600.1| hemK protein [Burkholderia mallei FMH] gi|254208573|ref|ZP_04914922.1| putative protein HemK [Burkholderia mallei JHU] gi|254355791|ref|ZP_04972070.1| protein hemK [Burkholderia mallei 2002721280] gi|52423041|gb|AAU46611.1| hemK protein [Burkholderia mallei ATCC 23344] gi|121225114|gb|ABM48645.1| methyltransferase, HemK family protein [Burkholderia mallei SAVP1] gi|124289916|gb|ABM99185.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Burkholderia mallei NCTC 10229] gi|126239548|gb|ABO02660.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Burkholderia mallei NCTC 10247] gi|147746283|gb|EDK53361.1| hemK protein [Burkholderia mallei FMH] gi|147751260|gb|EDK58328.1| putative protein HemK [Burkholderia mallei JHU] gi|148024762|gb|EDK82945.1| protein hemK [Burkholderia mallei 2002721280] gi|160696887|gb|EDP86857.1| protein hemK [Burkholderia mallei ATCC 10399] gi|238520528|gb|EEP83987.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Burkholderia mallei GB8 horse 4] gi|243061103|gb|EES43289.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Burkholderia mallei PRL-20] Length = 285 Score = 258 bits (659), Expect = 8e-67, Method: Composition-based stats. Identities = 80/261 (30%), Positives = 125/261 (47%), Gaps = 11/261 (4%) Query: 4 LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63 D+ L G S Q+I D LD R R E I ++ G R+F+ + Sbjct: 22 ALDARILLAHALGWSRTQLITRADEPLDAAARARYLALQARRAAGEPIAQLTGAREFFGL 81 Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 + ++ D PRPETELLV++AL I+ +LDLGTG+GA+ +++ E P + Sbjct: 82 KFDITPDVLIPRPETELLVETALD----AIDGIASPCVLDLGTGSGAIAVSIASERPDAR 137 Query: 124 GVGVDISCKALEIAKSNAVTNGVSER----FDTLQSDWFSSVEG--LFDVIVSNPPYIES 177 ++ S AL++A+ NA R L+SDW+++++ F V+VSNPPYI Sbjct: 138 VWALERSVAALDVARRNARKLLDPARAGGPLRFLESDWYAALDPGLRFHVVVSNPPYIAR 197 Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237 ++R F+PR +L DGL+ RTI G + G +E GY+Q V Sbjct: 198 HDPHLAEGDLR-FEPRGALTDENDGLAAIRTIVAGAHAFVAPGGALWLEHGYDQAAAVRA 256 Query: 238 IFESRKLFLVNAFKDYGGNDR 258 + ++ V + D +R Sbjct: 257 LLDAAGFADVESRADLASIER 277 >gi|220915514|ref|YP_002490818.1| modification methylase, HemK family [Anaeromyxobacter dehalogenans 2CP-1] gi|219953368|gb|ACL63752.1| modification methylase, HemK family [Anaeromyxobacter dehalogenans 2CP-1] Length = 286 Score = 258 bits (659), Expect = 8e-67, Method: Composition-based stats. Identities = 78/259 (30%), Positives = 119/259 (45%), Gaps = 11/259 (4%) Query: 7 SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66 + L ++ +D D L + + + + R + E + G RDFY Sbjct: 32 AELLLAHALRCERMRLYLDFDKPLGEPELAAFRDLVRRRAEGEPTAYLTGRRDFYGRPFL 91 Query: 67 LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126 + + PRPETEL++++A R + LDL TG+GA+ ++L E P + V Sbjct: 92 VDARVLVPRPETELVLEAA------RDALPEGGAALDLCTGSGALGVSLALERPGARVVA 145 Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIESVIVDCLG 184 D+S AL +A NA G + D Q D ++ + FDVIVSNPPY+ +D L Sbjct: 146 TDLSADALAVAAENARALGAA--VDLRQGDLWAPLRAGERFDVIVSNPPYVPRGELDTLP 203 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 EVR +PR++LDGG DGLS R I +G L G +E+ + R+ Sbjct: 204 REVRR-EPRLALDGGPDGLSLLRRIVEGAPARLAPGGTLVLEMHEGHLELLPRLCRDAGF 262 Query: 245 FLVNAFKDYGGNDRVLLFC 263 A +D G R+ + Sbjct: 263 AQAEARRDLAGLPRLTVAR 281 >gi|257066245|ref|YP_003152501.1| modification methylase, HemK family [Anaerococcus prevotii DSM 20548] gi|256798125|gb|ACV28780.1| modification methylase, HemK family [Anaerococcus prevotii DSM 20548] Length = 262 Score = 257 bits (658), Expect = 9e-67, Method: Composition-based stats. Identities = 72/254 (28%), Positives = 115/254 (45%), Gaps = 8/254 (3%) Query: 11 LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70 L + + VI+ + LD L + + + + +G +FY + + Sbjct: 16 LTYLLDTNKSSVILKSEEELDSEISLKLDQILKKYSEGYPLQYAIGEWEFYGLNFKVDER 75 Query: 71 TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130 PR ETE++VD + RILD+GTG+GA+ ++L + P + +G DI Sbjct: 76 ALIPRFETEIIVDFIIK------SPYKKNRILDIGTGSGAISISLARNLPTSEIIGSDIE 129 Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDF 190 KAL +A+ N S ++SD F + FD+I+SNPPYI D L E Sbjct: 130 EKALSLARENKKRLKAS-NVSFIKSDLFEEISEKFDIIISNPPYINQTDYDKLD-ERLYH 187 Query: 191 DPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAF 250 +P+ +L DGL Y+ I + +LN G EIGY+QK + + + Sbjct: 188 EPKSALLASEDGLYFYKRIIKEANSYLNDGGRLVFEIGYDQKQRICELLNESDFKNIKCM 247 Query: 251 KDYGGNDRVLLFCR 264 KDY DR ++ + Sbjct: 248 KDYNDFDRFIIAEK 261 >gi|33595094|ref|NP_882737.1| heme biosynthesis protein [Bordetella parapertussis 12822] gi|33565171|emb|CAE35967.1| heme biosynthesis protein [Bordetella parapertussis] Length = 270 Score = 257 bits (658), Expect = 9e-67, Method: Composition-based stats. Identities = 75/259 (28%), Positives = 119/259 (45%), Gaps = 9/259 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 ++ V G S ++ ++ R L E + +LG R+F Sbjct: 14 PRLEARMLAEHVLGRSRAWLLAHDTDPVEPAHEAAWRQLAARRLAGEPMAYLLGGREFMG 73 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 L+ D PRP+TELLV++AL + R+ R+LDLGTG+GA+ +++ P Sbjct: 74 HWFALTPDVLIPRPDTELLVETALHWLQGRV----APRVLDLGTGSGAIAVSVALGCPQA 129 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIESVIV 180 + D+S AL +A+ NA G R L DW+ ++ +D+IVSNPPYI Sbjct: 130 QVTATDLSAAALAVAEGNAQRLGA--RVRCLAGDWYEALPAQDRYDLIVSNPPYIAREDA 187 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 ++R F+PR +L DGL+ IA G L G +E G++Q + Sbjct: 188 HLAQGDLR-FEPRGALTDENDGLAALARIAGGAPGRLLPGGAIWMEHGWDQAEAARALLR 246 Query: 241 SRKLFLVNAFKDYGGNDRV 259 L V++ +D G +R+ Sbjct: 247 QAGLREVHSRRDLAGIERI 265 >gi|229014498|ref|ZP_04171616.1| Protein hemK [Bacillus mycoides DSM 2048] gi|228746848|gb|EEL96733.1| Protein hemK [Bacillus mycoides DSM 2048] Length = 283 Score = 257 bits (658), Expect = 9e-67, Method: Composition-based stats. Identities = 71/259 (27%), Positives = 112/259 (43%), Gaps = 7/259 (2%) Query: 8 HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67 LC V + ++++ + Q I + ++ I +LG+ FY + Sbjct: 25 EIVLCHVLKTNRTGMLMNMREEITAEQEKSFAQFIHKHVEGIPIQYMLGYEMFYGRSFFV 84 Query: 68 SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 + + PRPETE L+ L + + I D+GTG+GA+ + L E+ V Sbjct: 85 NEEVLIPRPETEELIVGVLERIERHFGNEE-LHIADIGTGSGAISITLALENKNLHVYTV 143 Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVIVDCLG 184 DI+ +++E+AK NA T G D S DV+VSNPPYI L Sbjct: 144 DIAQESIEVAKENAKTLGAD--VTFYHGDLLSPFYETGQKLDVVVSNPPYIPEEDWRGLS 201 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-K 243 V++ +P+ +L GG DGL YR + + L + + EIG Q DV + + Sbjct: 202 TVVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQNKAIVAFEIGVGQGEDVKALLQQTFP 261 Query: 244 LFLVNAFKDYGGNDRVLLF 262 V D G DR++ Sbjct: 262 RAQVEVVFDINGKDRMVFA 280 >gi|222529062|ref|YP_002572944.1| HemK family modification methylase [Caldicellulosiruptor bescii DSM 6725] gi|222455909|gb|ACM60171.1| modification methylase, HemK family [Caldicellulosiruptor bescii DSM 6725] Length = 288 Score = 257 bits (658), Expect = 9e-67, Method: Composition-based stats. Identities = 70/258 (27%), Positives = 122/258 (47%), Gaps = 8/258 (3%) Query: 7 SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66 + L ++ + +VI++ ++ + + NAI + L+ + F + L Sbjct: 34 ALMMLSQILNMEKTEVILNKGLPVEQDKYEKIVNAISKYLQDYPLQYCTNKAFFMGLELY 93 Query: 67 LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126 + + PR +TE+LV+ A+ + + + LD+GTG+G + +AL K K Sbjct: 94 VDENVLIPRFDTEVLVEVAIEI----FKSKKNLYFLDIGTGSGCIAVALCKFL-DCKVFA 148 Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCLG 184 VDIS +ALE+A NA NGV R ++S+ F + +D I+SNPPYI + L Sbjct: 149 VDISERALEVASKNAKLNGVENRISFVRSNLFEDIPKNLRYDAIISNPPYISDEEIFELD 208 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 V +P I+L DGL +R IA+ +L G E+G++Q V I + Sbjct: 209 PRVLK-EPHIALFSKEDGLWFFREIANKAKLYLKDGGYIIFEVGFSQAEKVKEILKKNGY 267 Query: 245 FLVNAFKDYGGNDRVLLF 262 +++ +D +R + Sbjct: 268 KNISSRRDLNNVERCIFA 285 >gi|291561382|emb|CBL40181.1| protein-(glutamine-N5) methyltransferase, release factor-specific [butyrate-producing bacterium SS3/4] Length = 387 Score = 257 bits (658), Expect = 1e-66, Method: Composition-based stats. Identities = 81/336 (24%), Positives = 131/336 (38%), Gaps = 81/336 (24%) Query: 1 MQALRDSHSFLCRVTGLSSHQVIVDPDSVLD----------------------------- 31 ++A D+ ++ G+S Q + + Sbjct: 48 VEADLDAWYLFGQIFGISRAQYFLCARENIAGSTAQKMAAQEQTGNSLESKNALDCVELW 107 Query: 32 -DRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSL 90 + N + + + +ILG ++F + ++ PR +TE LV+ L Sbjct: 108 LKEKLSAYENTLEKRASRIPLQQILGQQEFMGLTFFVNEHVLIPRQDTETLVELVLNE-- 165 Query: 91 PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV-------- 142 +K + ILD+ TG+G + ++L K + G DIS +AL++AK N+ Sbjct: 166 ---QKDKNISILDMCTGSGCIAVSLKKLGGYACVEGADISEEALKVAKRNSEEILENSDV 222 Query: 143 ------------------------------------TNGVSERFDTLQSDWFSSVEG--L 164 G SD FSS Sbjct: 223 NNDAVSSRTEQIQNCTNLTNNQNKQDNSEERMVSEVRRGSQTGVTFRHSDMFSSFRETEQ 282 Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224 F+VIVSNPPY+ S +++ L EVRD +PR +LDG DGL YR +A+ ++HL G Sbjct: 283 FNVIVSNPPYVPSAVIEELEPEVRDHEPRGALDGTADGLYFYRILAEECAKHLTPGGHVY 342 Query: 225 VEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 EIGY+Q + V + ++ +D G DRV+ Sbjct: 343 FEIGYDQGMAVKELLDNHGFKDTRVIQDLTGKDRVV 378 >gi|317130772|ref|YP_004097054.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacillus cellulosilyticus DSM 2522] gi|315475720|gb|ADU32323.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacillus cellulosilyticus DSM 2522] Length = 290 Score = 257 bits (658), Expect = 1e-66, Method: Composition-based stats. Identities = 69/261 (26%), Positives = 118/261 (45%), Gaps = 7/261 (2%) Query: 7 SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66 + + TG S ++ + + L + ++ + I+G FY Sbjct: 28 AQLLMRHHTGWSRSRLFSEMQTTLPAPIWTRFEADVRQAATGTPVQHIIGHEQFYGRDFK 87 Query: 67 LSSDTFEPRPETELLVDSALAFSLPRIEKRD-VVRILDLGTGTGAVCLALLKESPFFKGV 125 ++S+ PRPETE L+++ L R+ +RI+D+GTG+G + + L E Sbjct: 88 VNSNVLIPRPETEELIEALLGKIKSLFLNREQPIRIVDVGTGSGIIAITLALEVVHSHVH 147 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIVDC 182 VDIS AL++A+SNA G + + D FD+++SNPPYI Sbjct: 148 AVDISQAALDVARSNATALGA--KVTFHEGDLLEPFLAESSEFDIVISNPPYIPEGDRAI 205 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES- 241 + V D +P ++L G DGL+ YR + + L+K GL + EIG+ Q V + + Sbjct: 206 MKENVLDHEPALALFAGQDGLTIYRKLIKQIPFVLHKKGLVAFEIGHGQGESVKALLAAE 265 Query: 242 RKLFLVNAFKDYGGNDRVLLF 262 + D G +R+++ Sbjct: 266 YPAADIAVLNDINGKERIVIA 286 >gi|229136147|ref|ZP_04264900.1| Protein hemK [Bacillus cereus BDRD-ST196] gi|228647306|gb|EEL03388.1| Protein hemK [Bacillus cereus BDRD-ST196] Length = 283 Score = 257 bits (658), Expect = 1e-66, Method: Composition-based stats. Identities = 71/259 (27%), Positives = 112/259 (43%), Gaps = 7/259 (2%) Query: 8 HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67 LC V + ++++ + Q I + ++ I +LG+ FY + Sbjct: 25 EIVLCHVLKTNRTGMLMNMREEITAEQEESFAEFIHKHVEGIPIQYMLGYEMFYGRSFFV 84 Query: 68 SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 + + PRPETE L+ L + + I D+GTG+GA+ + L E+ V Sbjct: 85 NEEVLIPRPETEELIVGVLERIERHFGNEE-LHIADIGTGSGAISITLALENKNLHVYTV 143 Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVIVDCLG 184 DI+ +++E+AK NA T G D S DV+VSNPPYI L Sbjct: 144 DIAQESIEVAKENAKTLGAD--VTFYHGDLLSPFYETGQKLDVVVSNPPYIPEEDWRGLS 201 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-K 243 V++ +P+ +L GG DGL YR + + L + + EIG Q DV + + Sbjct: 202 TVVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQNKAIVAFEIGVGQGEDVKALLQQTFP 261 Query: 244 LFLVNAFKDYGGNDRVLLF 262 V D G DR++ Sbjct: 262 RAQVEVVFDINGKDRMVFA 280 >gi|239828603|ref|YP_002951227.1| modification methylase, HemK family [Geobacillus sp. WCH70] gi|239808896|gb|ACS25961.1| modification methylase, HemK family [Geobacillus sp. WCH70] Length = 288 Score = 257 bits (658), Expect = 1e-66, Method: Composition-based stats. Identities = 72/263 (27%), Positives = 116/263 (44%), Gaps = 7/263 (2%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSL-KHESIHRILGWRDFYNV 63 R + LC ++ Q+ +D+ R + + + +H + ++G FY Sbjct: 24 RAAELLLCHHLQITRAQLFARLRDPIDENVRQSFEADVRKHVYEHVPVQHLIGLEQFYGR 83 Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 ++ + PRPETE LV+ L + ++D+GTG+GA+ + L E+ + Sbjct: 84 PFLVNRNVLIPRPETEELVEGVLTRITQLFPGNKTIDVVDVGTGSGAIAITLALENKSLR 143 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIV 180 +DI+ +ALE+AK NA G + D + DV+VSNPPYI + Sbjct: 144 VAAIDIAPEALEVAKRNAERLGAD--VAFICGDLLQPLVEASRKVDVVVSNPPYIPENEI 201 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 L V+D++P +L GG DGL YR A + L + L + E+G Q V I Sbjct: 202 ASLSPVVKDYEPLRALSGGKDGLDFYRRFARELPFVLKERALVAFEVGAGQGEAVAAILR 261 Query: 241 SR-KLFLVNAFKDYGGNDRVLLF 262 V D G DR++ Sbjct: 262 QTFPQAEVEVVFDINGKDRMVYA 284 >gi|116493077|ref|YP_804812.1| methylase of polypeptide chain release factor [Pediococcus pentosaceus ATCC 25745] gi|116103227|gb|ABJ68370.1| Methylase of polypeptide chain release factor [Pediococcus pentosaceus ATCC 25745] Length = 283 Score = 257 bits (658), Expect = 1e-66, Method: Composition-based stats. Identities = 77/255 (30%), Positives = 116/255 (45%), Gaps = 7/255 (2%) Query: 8 HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67 L S ++I+ L Q A+ R K E + + F+ + Sbjct: 29 ELILMDTMEWSRTELIMHYREKLFPEQWEKFQTAVKRVAKGEPVQYVTNKATFFGREFYV 88 Query: 68 SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 PR ETE LV++ L+ + R +R+LD+GTG+G + + L E P + V Sbjct: 89 DKRVLIPRVETEELVETILSKTK---RSRQRLRVLDIGTGSGDIAITLKLERPEWLVTAV 145 Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLE 186 DIS AL +A+ NA ++ D F V+G FD+I+SNPPYI + Sbjct: 146 DISKDALTVAQRNAESHEAI--VDFRLGSLFEPVQGERFDLIISNPPYIADNEKHEMDQS 203 Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246 V DF+P +L GL Y+ IAD + ++L + G EIGY Q D+ + F +K Sbjct: 204 VIDFEPHQALFADDHGLFWYKRIADQLDQYLVEHGELGCEIGYRQGTDLKKYFLEKKYID 263 Query: 247 -VNAFKDYGGNDRVL 260 KD +DR+L Sbjct: 264 QAEVIKDLSQHDRIL 278 >gi|213962836|ref|ZP_03391096.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Capnocytophaga sputigena Capno] gi|213954493|gb|EEB65815.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Capnocytophaga sputigena Capno] Length = 287 Score = 257 bits (658), Expect = 1e-66, Method: Composition-based stats. Identities = 73/255 (28%), Positives = 121/255 (47%), Gaps = 8/255 (3%) Query: 9 SFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLS 68 L ++ V+ + D++L D + + AI + I ILG +F++ R + Sbjct: 29 ILLEHYVNYTTADVLANADTLLTDDIKQSIQQAITELQTAKPIQYILGETEFFSNRFFVD 88 Query: 69 SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128 + PRPETE LVD L +K + ILD+GTG+G + ++L K P +D Sbjct: 89 ENVLIPRPETEELVDWVLQT---YPDKNYPLHILDIGTGSGCIPISLAKALPKSVVTAID 145 Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFS--SVEGLFDVIVSNPPYIESVIVDCLGLE 186 +S KA+ +A+ NA NGV + LQ D ++ +DVI+SNPPY+ + + Sbjct: 146 VSPKAITVAQRNADRNGV--KIQFLQCDILQTKTLPQKYDVIISNPPYVRELEKTEMHSN 203 Query: 187 VRDFDPRISLDGGID-GLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245 V ++P ++L + L Y IA R+L +G EI ++ + + Sbjct: 204 VLSYEPHLALFVPNERPLLFYEQIASLAQRYLKPEGSLFFEINQYLAAEMQAMLTQKNFA 263 Query: 246 LVNAFKDYGGNDRVL 260 + +D GNDR+L Sbjct: 264 EIILRQDLSGNDRML 278 >gi|312793257|ref|YP_004026180.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Caldicellulosiruptor kristjanssonii 177R1B] gi|312180397|gb|ADQ40567.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Caldicellulosiruptor kristjanssonii 177R1B] Length = 288 Score = 257 bits (657), Expect = 1e-66, Method: Composition-based stats. Identities = 72/258 (27%), Positives = 124/258 (48%), Gaps = 8/258 (3%) Query: 7 SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66 + + ++ G+ +VI++ + + + NAI R L+ + F Sbjct: 34 ALMMVSQILGIDKAEVILNKGLPVRQDKYEKIVNAISRYLQGYPLQYCTNKAFFMGFEFY 93 Query: 67 LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126 + + PR +TE+LV+ A+ + R + LD+GTG+G + +AL K K + Sbjct: 94 VDENVLIPRFDTEVLVEVAIEI----FKGRKNLYFLDIGTGSGCIAVALCKFL-DCKVLA 148 Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCLG 184 VDIS +ALE+A+ NA NGV + ++S+ F ++ FD I+SNPPYI + L Sbjct: 149 VDISERALEVARKNAKLNGVENKISFIRSNLFENIPQNLKFDAILSNPPYISKDEIFELD 208 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 V +P I+L DG ++ IA+ +L G E+G++Q +V RI E + Sbjct: 209 QRVLK-EPHIALFSKEDGFWFFKEIANKAKLYLKDSGYIIFEVGFSQAKEVKRILEQKGY 267 Query: 245 FLVNAFKDYGGNDRVLLF 262 + + KD +R + Sbjct: 268 KNIKSRKDLNNIERCIFA 285 >gi|149914650|ref|ZP_01903180.1| modification methylase, HemK family, putative [Roseobacter sp. AzwK-3b] gi|149811443|gb|EDM71278.1| modification methylase, HemK family, putative [Roseobacter sp. AzwK-3b] Length = 278 Score = 257 bits (657), Expect = 1e-66, Method: Composition-based stats. Identities = 93/259 (35%), Positives = 132/259 (50%), Gaps = 9/259 (3%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 R++ L V ++ ++ + L R E + +LG+R+FY Sbjct: 23 DPAREARLILAHVLDVAPGRMTMLAPEPLQAGALAAAAGLAQRRAAGEPMAHLLGYREFY 82 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 R + + +PRPETE LV+ ALA + R+LDLGTG+G + L+LL E P Sbjct: 83 GRRFAVDARVLDPRPETETLVERALAVAFS--------RVLDLGTGSGCILLSLLAERPD 134 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181 GVGVD+S ALE+A+ NA +S R + L SDWF++V G FD+IVSNPPYI + + Sbjct: 135 ATGVGVDLSEDALEVARRNAARLDLSARCEFLVSDWFAAVRGTFDLIVSNPPYIAADEMA 194 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 L E ++PR++L GLS YR I L + G VEIG+ Q DV + + Sbjct: 195 GLARE-LQYEPRMALTDEGCGLSAYRAIVAEAGACLVEGGRLIVEIGWRQGADVADLMRA 253 Query: 242 RKLFLVNAFKDYGGNDRVL 260 V D G DRV+ Sbjct: 254 GGFAEVCVRPDLDGRDRVV 272 >gi|83310718|ref|YP_420982.1| methylase of polypeptide chain release factor [Magnetospirillum magneticum AMB-1] gi|82945559|dbj|BAE50423.1| Methylase of polypeptide chain release factor [Magnetospirillum magneticum AMB-1] Length = 283 Score = 257 bits (657), Expect = 1e-66, Method: Composition-based stats. Identities = 90/262 (34%), Positives = 138/262 (52%), Gaps = 3/262 (1%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A D+ + V G+ ++ + L + L + R E + ILG R F+ Sbjct: 23 AHYDARLLVAEVLGVEMRRLPASHHAELTGDEAARLAALLERRAAREPMSHILGRRGFWT 82 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + +++DT +PRP+TE L+++ L R R R+LD GTGTG + L LL E Sbjct: 83 LEFAVTADTLDPRPDTETLIEAVLDALEDRGRPR---RLLDFGTGTGCILLTLLSELGHA 139 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182 G+G+D S AL +A NA++ G++ R + DW + G FDVIVSNPPYI +D Sbjct: 140 TGLGIDASPAALAVAGRNALSLGLAPRAEFRLGDWGEGLNGQFDVIVSNPPYIPDAEIDG 199 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 L EV ++PR +L GG DGL YR + ++R L G+ ++E+G Q VDV + + Sbjct: 200 LEPEVARYEPRSALAGGSDGLECYRRLIPHMARLLAPGGIAALEVGAGQAVDVCALLAAA 259 Query: 243 KLFLVNAFKDYGGNDRVLLFCR 264 L + +D GG +R ++ R Sbjct: 260 GLAGASVRRDLGGIERCVIVRR 281 >gi|163943016|ref|YP_001647900.1| HemK family modification methylase [Bacillus weihenstephanensis KBAB4] gi|163865213|gb|ABY46272.1| modification methylase, HemK family [Bacillus weihenstephanensis KBAB4] Length = 283 Score = 257 bits (657), Expect = 1e-66, Method: Composition-based stats. Identities = 72/259 (27%), Positives = 112/259 (43%), Gaps = 7/259 (2%) Query: 8 HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67 LC V + ++++ + Q I ++ I +LG+ FY + Sbjct: 25 EIVLCHVLKTNRTGMLMNMREEITAEQEKSFAEFIHNHVEGIPIQYMLGYEMFYGRSFFV 84 Query: 68 SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 + + PRPETE L+ L + + I D+GTG+GA+ + L E+ V Sbjct: 85 NEEVLIPRPETEELIVGVLERIERHFGNEE-LHIADIGTGSGAISITLALENKNLHVYTV 143 Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVIVDCLG 184 DI+ +++E+AK NA T G D S DV+VSNPPYI L Sbjct: 144 DIAQESIEVAKENAKTLGAD--VTFYHGDLLSPFYETGQKLDVVVSNPPYIPEEDWRGLS 201 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-K 243 V++ +P+ +L GG DGL YR + + L K + + EIG Q DV + + Sbjct: 202 TVVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEIGVGQGEDVKALLQQTFP 261 Query: 244 LFLVNAFKDYGGNDRVLLF 262 V D G DR++ Sbjct: 262 RAQVEVVFDINGKDRMVFA 280 >gi|126441418|ref|YP_001060596.1| putative protein hemK [Burkholderia pseudomallei 668] gi|126452796|ref|YP_001067846.1| protein hemK [Burkholderia pseudomallei 1106a] gi|134283321|ref|ZP_01770022.1| HemK-like protein [Burkholderia pseudomallei 305] gi|167825995|ref|ZP_02457466.1| protein methyltransferase HemK [Burkholderia pseudomallei 9] gi|167847482|ref|ZP_02472990.1| protein methyltransferase HemK [Burkholderia pseudomallei B7210] gi|167896070|ref|ZP_02483472.1| protein methyltransferase HemK [Burkholderia pseudomallei 7894] gi|167904456|ref|ZP_02491661.1| protein methyltransferase HemK [Burkholderia pseudomallei NCTC 13177] gi|167912717|ref|ZP_02499808.1| protein methyltransferase HemK [Burkholderia pseudomallei 112] gi|167920677|ref|ZP_02507768.1| protein methyltransferase HemK [Burkholderia pseudomallei BCC215] gi|226198254|ref|ZP_03793825.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Burkholderia pseudomallei Pakistan 9] gi|237813981|ref|YP_002898432.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Burkholderia pseudomallei MSHR346] gi|242318052|ref|ZP_04817068.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Burkholderia pseudomallei 1106b] gi|254198427|ref|ZP_04904848.1| putative protein hemK [Burkholderia pseudomallei S13] gi|254300724|ref|ZP_04968169.1| protein Hemk [Burkholderia pseudomallei 406e] gi|126220911|gb|ABN84417.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Burkholderia pseudomallei 668] gi|126226438|gb|ABN89978.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Burkholderia pseudomallei 1106a] gi|134245516|gb|EBA45609.1| HemK-like protein [Burkholderia pseudomallei 305] gi|157810623|gb|EDO87793.1| protein Hemk [Burkholderia pseudomallei 406e] gi|169655167|gb|EDS87860.1| putative protein hemK [Burkholderia pseudomallei S13] gi|225929774|gb|EEH25790.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Burkholderia pseudomallei Pakistan 9] gi|237504345|gb|ACQ96663.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Burkholderia pseudomallei MSHR346] gi|242141291|gb|EES27693.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Burkholderia pseudomallei 1106b] Length = 285 Score = 257 bits (657), Expect = 1e-66, Method: Composition-based stats. Identities = 80/261 (30%), Positives = 124/261 (47%), Gaps = 11/261 (4%) Query: 4 LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63 D+ L G S Q+I D LD R R E I ++ G R+F+ + Sbjct: 22 ALDARILLAHALGWSRTQLITRADEPLDAAARARYLALQARRAAGEPIAQLTGAREFFGL 81 Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 ++ D PRPETELLV++AL I+ +LDLGTG+GA+ +++ E P + Sbjct: 82 EFDITPDVLIPRPETELLVETALD----AIDGIASPCVLDLGTGSGAIAVSIASERPDAR 137 Query: 124 GVGVDISCKALEIAKSNAVTNGVSER----FDTLQSDWFSSVEG--LFDVIVSNPPYIES 177 ++ S AL++A+ NA R L+SDW+++++ F V+VSNPPYI Sbjct: 138 VWALERSVAALDVARRNARKLLDPARAGGPLRFLESDWYAALDPGLRFHVVVSNPPYIAR 197 Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237 ++R F+PR +L DGL+ RTI G + G +E GY+Q V Sbjct: 198 HDPHLAEGDLR-FEPRGALTDENDGLAAIRTIVAGAHAFVAPGGALWLEHGYDQAAAVRA 256 Query: 238 IFESRKLFLVNAFKDYGGNDR 258 + ++ V + D +R Sbjct: 257 LLDAAGFADVESRADLASIER 277 >gi|312865012|ref|ZP_07725240.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptococcus downei F0415] gi|311099123|gb|EFQ57339.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptococcus downei F0415] Length = 276 Score = 257 bits (657), Expect = 1e-66, Method: Composition-based stats. Identities = 86/247 (34%), Positives = 128/247 (51%), Gaps = 8/247 (3%) Query: 16 GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75 GL ++ + + + L R L HE ILG+ F++++L + PR Sbjct: 33 GLDMTGFVLLLRQEVSEEDQALLARIAQRLLAHEPAQYILGYETFHDLKLKVDKRILIPR 92 Query: 76 PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135 PET LVD LA + + + +LD+GTG+GA+ LAL E P ++ V DIS +AL+ Sbjct: 93 PETAELVDLILAEN-----ADEQLDLLDIGTGSGAIALALAHERPTWRIVASDISQEALD 147 Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195 +AK NA N ++ D QSD FS + +D+IVSNPPYI +GL V +P ++ Sbjct: 148 LAKENAQANQIA--VDFCQSDLFSQLSVSYDIIVSNPPYISEADKAEVGLNVLTSEPHLA 205 Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDYG 254 L +GL+ YR +A +HL DG +EIGY Q V ++F V D Sbjct: 206 LFADEEGLAIYRKLAQQAGKHLKADGKIYLEIGYKQGQIVSQLFREAFPDKRVRVLPDQF 265 Query: 255 GNDRVLL 261 G DR+++ Sbjct: 266 GQDRMVV 272 >gi|187251501|ref|YP_001875983.1| protein-(glutamine-N5) methyltransferase [Elusimicrobium minutum Pei191] gi|186971661|gb|ACC98646.1| Protein-(glutamine-N5) methyltransferase [Elusimicrobium minutum Pei191] Length = 277 Score = 257 bits (657), Expect = 1e-66, Method: Composition-based stats. Identities = 71/258 (27%), Positives = 118/258 (45%), Gaps = 8/258 (3%) Query: 7 SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66 + L V LS V+ + + + + I + L + I G +DF Sbjct: 27 AEFLLAHVLNLSRGVVLSNQEREVGAEDAQKYFDFINKRLLGMPLAYITGTQDFCGHTFI 86 Query: 67 LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126 + SD PRPETE LV+ + + RILD+ TG+G + ++ + + G Sbjct: 87 VDSDVLVPRPETEELVEISSSML------GKPKRILDMCTGSGCIACSMAMKYRSAQVTG 140 Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLE 186 VD S AL A+ N G+ + + D F ++ G FD+I++NPPYI + + L E Sbjct: 141 VDNSMAALLTAEKNVKKFGLQ-NVELIYGDLFENIYGAFDLIITNPPYIPTGDLAGLSRE 199 Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246 V++ +P+ +LDGG +GL I L GL ++E G N++ ++ +F+ Sbjct: 200 VKE-EPQAALDGGENGLDIITQIILYAPDFLETGGLLTMEYGINREREIEGLFDKNIWRS 258 Query: 247 VNAFKDYGGNDRVLLFCR 264 V KD G R + + Sbjct: 259 VEVKKDMFGIYRFVFAQK 276 >gi|302036344|ref|YP_003796666.1| protein-(glutamine-N5) methyltransferase [Candidatus Nitrospira defluvii] gi|300604408|emb|CBK40740.1| Protein-(glutamine-N5) methyltransferase [Candidatus Nitrospira defluvii] Length = 309 Score = 257 bits (657), Expect = 1e-66, Method: Composition-based stats. Identities = 72/269 (26%), Positives = 126/269 (46%), Gaps = 10/269 (3%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 ++ ++ L V +S V + + + + R E + +LG ++F Sbjct: 34 ESALEAAWLLEHVLHVSPLMQRVQAERPVTAVDYASMQELVARRANREPLQYLLGTQEFC 93 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 + ++S PRPE+ LLV ++ R + ++D+GTG+G + +++ P Sbjct: 94 DREFRVTSAVLIPRPESALLVQE----TIRRCRQNPSAIVVDVGTGSGCLAVSVASALPD 149 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-----FDVIVSNPPYIE 176 + + +D S AL +A++N G R + +Q D + + DVIVSNPPYI Sbjct: 150 ARVLAIDASADALAVAQANMEQFGFGARIECVQGDLLAPLAQRGETSQVDVIVSNPPYIA 209 Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236 + + L EVR F+P ++L GG DG+ +R + +L G+ +E+G Q V Sbjct: 210 DLDLVTLQPEVRCFEPHLALAGGPDGMDVHRRLLQQAPVYLKSRGVLLMEVGLGQAELVC 269 Query: 237 RIFESRKLFLV-NAFKDYGGNDRVLLFCR 264 R E F + +D GG DRV+ F + Sbjct: 270 REAEKSGWFRTYDVLRDEGGIDRVVCFEK 298 >gi|296775700|gb|ADH42976.1| polypeptide chain release factor methylase [uncultured SAR11 cluster alpha proteobacterium H17925_38M03] Length = 279 Score = 256 bits (656), Expect = 2e-66, Method: Composition-based stats. Identities = 82/259 (31%), Positives = 133/259 (51%), Gaps = 5/259 (1%) Query: 4 LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63 + DS L + S +++V+ + + D++ + R ++E I I+ ++F+ Sbjct: 23 ILDSEILLSKTLNKSREEILVNLNFEIKDKEILVFNEYLNRRSQNEPIAYIVEEKEFWGE 82 Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 + ++ DT PRPETELLVD L +I V ILD+GTG+G + L+LL Sbjct: 83 KFYVNKDTLIPRPETELLVDKIL-----KIYNGKKVTILDMGTGSGCIILSLLNNLNKSY 137 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183 G+GVDIS +A+ IAK NA + + + + FD+IVSNPPY+ + L Sbjct: 138 GIGVDISKRAILIAKKNASRLKILNKVKFFNRPFENIFYKKFDLIVSNPPYVIRKDIKNL 197 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 +V+ F+P+I++DGG DGL + + L G+ ++EIG Q V +I + Sbjct: 198 SPDVKKFEPKIAIDGGNDGLDLIKKVIYKSKNILKIKGVLALEIGNEQYKKVSKILVNNS 257 Query: 244 LFLVNAFKDYGGNDRVLLF 262 + N KDY N R ++ Sbjct: 258 FKIKNTIKDYKNNVRCIIA 276 >gi|53720683|ref|YP_109669.1| protein methyltransferase HemK [Burkholderia pseudomallei K96243] gi|76809364|ref|YP_334969.1| protein methyltransferase HemK [Burkholderia pseudomallei 1710b] gi|217424835|ref|ZP_03456332.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Burkholderia pseudomallei 576] gi|254190472|ref|ZP_04896980.1| putative HemK protein [Burkholderia pseudomallei Pasteur 52237] gi|254258481|ref|ZP_04949535.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Burkholderia pseudomallei 1710a] gi|52211097|emb|CAH37085.1| protein methyltransferase HemK [Burkholderia pseudomallei K96243] gi|76578817|gb|ABA48292.1| protein methyltransferase HemK [Burkholderia pseudomallei 1710b] gi|157938148|gb|EDO93818.1| putative HemK protein [Burkholderia pseudomallei Pasteur 52237] gi|217392291|gb|EEC32316.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Burkholderia pseudomallei 576] gi|254217170|gb|EET06554.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Burkholderia pseudomallei 1710a] Length = 285 Score = 256 bits (656), Expect = 2e-66, Method: Composition-based stats. Identities = 80/261 (30%), Positives = 124/261 (47%), Gaps = 11/261 (4%) Query: 4 LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63 D+ L G S Q+I D LD R R E I ++ G R+F+ + Sbjct: 22 ALDARILLAHALGWSRTQLITRADEPLDAAARARYLALQARRAAGEPIAQLTGAREFFGL 81 Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 ++ D PRPETELLV++AL I+ +LDLGTG+GA+ +++ E P + Sbjct: 82 EFDITPDVLIPRPETELLVETALD----AIDGIASPCVLDLGTGSGAIAVSIASERPDAR 137 Query: 124 GVGVDISCKALEIAKSNAVTNGVSER----FDTLQSDWFSSVEG--LFDVIVSNPPYIES 177 ++ S AL++A+ NA R L+SDW+++++ F V+VSNPPYI Sbjct: 138 VWALERSVAALDVARRNARKLLDPARAGGPLRFLESDWYAALDPGLRFHVVVSNPPYIAR 197 Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237 ++R F+PR +L DGL+ RTI G + G +E GY+Q V Sbjct: 198 HDPHLAEGDLR-FEPRGALTDENDGLAAIRTIVAGAHAFVAPGGALWLEHGYDQAAAVRT 256 Query: 238 IFESRKLFLVNAFKDYGGNDR 258 + ++ V + D +R Sbjct: 257 LLDAAGFADVESRADLASIER 277 >gi|167740376|ref|ZP_02413150.1| protein methyltransferase HemK [Burkholderia pseudomallei 14] Length = 284 Score = 256 bits (656), Expect = 2e-66, Method: Composition-based stats. Identities = 80/261 (30%), Positives = 124/261 (47%), Gaps = 12/261 (4%) Query: 4 LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63 D+ L G S Q+I D LD R R E I ++ G R+F+ + Sbjct: 22 ALDARILLAHALGWSRTQLITRADEPLDAA-RARYLALQARRAAGEPIAQLTGAREFFGL 80 Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 ++ D PRPETELLV++AL I+ +LDLGTG+GA+ +++ E P + Sbjct: 81 EFDITPDVLIPRPETELLVETALD----AIDGIASPCVLDLGTGSGAIAVSIASERPDAR 136 Query: 124 GVGVDISCKALEIAKSNAVTNGVSER----FDTLQSDWFSSVEG--LFDVIVSNPPYIES 177 ++ S AL++A+ NA R L+SDW+++++ F V+VSNPPYI Sbjct: 137 VWALERSVAALDVARRNARKLLDPARAGGPLRFLESDWYAALDPGLRFHVVVSNPPYIAR 196 Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237 ++R F+PR +L DGL+ RTI G + G +E GY+Q V Sbjct: 197 HDPHLAEGDLR-FEPRGALTDENDGLAAIRTIVAGAHAFVAPGGALWLEHGYDQAAAVRA 255 Query: 238 IFESRKLFLVNAFKDYGGNDR 258 + ++ V + D +R Sbjct: 256 LLDAAGFADVESRADLASIER 276 >gi|94676905|ref|YP_588738.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] gi|94220055|gb|ABF14214.1| protein methyltranferase HemK [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] Length = 281 Score = 256 bits (656), Expect = 2e-66, Method: Composition-based stats. Identities = 79/265 (29%), Positives = 130/265 (49%), Gaps = 11/265 (4%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 D+ L ++ S ++ +++L+D Q L N + R L+ E I I+G +F++ Sbjct: 21 PRLDAELLLGQIVSTSRAHILAFGNNLLNDNQYKQLENLLERRLRGEPIAYIIGEWEFWS 80 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + + +S DT PRP+TE LV+ AL LP ++LDLGTGTGA+ LAL E P + Sbjct: 81 LPIRVSPDTIIPRPDTECLVEQALGLLLPI-----HAKVLDLGTGTGAITLALASERPSW 135 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIESV 178 + GVD A+E+A NA G+ L WF ++ + +I+SNPPY+++ Sbjct: 136 QFTGVDNHPGAVELADINAARLGL-NNVRFLCGSWFEPLQSQVTPRYSLIISNPPYVDAN 194 Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238 L V F+P+ +L +G++ I S +L G +E G+ Q +V + Sbjct: 195 DPHLNNLGV-CFEPKSALVADCNGIADLAAICCQASTYLQHKGWIILEHGWLQGKEVRTL 253 Query: 239 FESRKLFLVNAFKDYGGNDRVLLFC 263 + DY ++RV + Sbjct: 254 LMKAGFIHIVTTHDYSNHERVTMGQ 278 >gi|254993430|ref|ZP_05275620.1| HemK family modification methylase [Listeria monocytogenes FSL J2-064] Length = 283 Score = 256 bits (655), Expect = 2e-66, Method: Composition-based stats. Identities = 81/256 (31%), Positives = 113/256 (44%), Gaps = 6/256 (2%) Query: 7 SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66 + L GLS ++ ++ L+ R L E + IL FY Sbjct: 25 AEILLETRMGLSRSELWMEISRELEPNHEKQFEEDFARYLAGEPVQYILKTAPFYGYDFL 84 Query: 67 LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126 ++ D PRPETE LV A + ++K V +LD+ TG+G + +AL K P Sbjct: 85 VTEDVLIPRPETEELV----ACAEDFLKKHSVKNVLDVCTGSGIIAIALKKAFPEISMTA 140 Query: 127 VDISCKALEIAKSNAVTNGVSERF-DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185 DIS AL +AK NA+ RF +T + F E FD+IV+NPPYI + Sbjct: 141 SDISAPALAVAKKNALLLNADVRFVETDLLEAFKQNEERFDMIVANPPYISEAEKAEMSD 200 Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE-SRKL 244 V +P ++L DGL+ Y D + LN VEIGY Q V ++FE S Sbjct: 201 YVLKNEPSLALFAENDGLAIYERFVDNLQYVLNSSFWVGVEIGYTQGERVKQLFEKSYPH 260 Query: 245 FLVNAFKDYGGNDRVL 260 V KD DR + Sbjct: 261 STVIIHKDINSKDRYV 276 >gi|312115444|ref|YP_004013040.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Rhodomicrobium vannielii ATCC 17100] gi|311220573|gb|ADP71941.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Rhodomicrobium vannielii ATCC 17100] Length = 306 Score = 256 bits (655), Expect = 2e-66, Method: Composition-based stats. Identities = 99/264 (37%), Positives = 131/264 (49%), Gaps = 2/264 (0%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A D+ G SS +++ D+ L R E + RI+G R+F+ Sbjct: 23 AALDARLLSAYAAGFSSEEIVTKRDTALPPEILDRAIAVAQRRFAGEPVSRIVGTREFWG 82 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + LS T +PRP+TE+LVD+ LA+ +RILDLGTGTG + ALL E P Sbjct: 83 MPFGLSPHTLDPRPDTEVLVDAGLAWCRKHDLANAPLRILDLGTGTGCILAALLSELPKA 142 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVD 181 GVGVD S AL A++N G+S R DW ++ + FD+I NPPYIE+ + Sbjct: 143 TGVGVDRSEGALRTARANFARLGLSSRAFFFCGDWGVALADATFDIIACNPPYIETADIA 202 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 L EVRDFDP ++LDGG DGL YR I SR L GL E G+ Q V + Sbjct: 203 GLCAEVRDFDPALALDGGKDGLKAYRDIVPQASRLLRVPGLLIFETGHRQARSVRDMVTE 262 Query: 242 RK-LFLVNAFKDYGGNDRVLLFCR 264 F F D G +R + R Sbjct: 263 LDAGFQTEIFLDLAGIERAVAGVR 286 >gi|303232598|ref|ZP_07319284.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Atopobium vaginae PB189-T1-4] gi|302481385|gb|EFL44459.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Atopobium vaginae PB189-T1-4] Length = 546 Score = 256 bits (655), Expect = 2e-66, Method: Composition-based stats. Identities = 75/262 (28%), Positives = 122/262 (46%), Gaps = 5/262 (1%) Query: 7 SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66 S +C T L+ ++ ++ D VL + + + + + + + I G F ++ L Sbjct: 51 SQWLICAATKLTRVELFLNFDRVLTNDELACMHKLVAARAEGKPLQYITGEMAFRHIVLR 110 Query: 67 LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126 PRPETE+LV+ AL IL++GTG+G + L++ E Sbjct: 111 CEEQVLIPRPETEMLVEYALNKLTILHTAPHTPVILEIGTGSGCIALSIASELEHSHVTA 170 Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFS----SVEGLFDVIVSNPPYIESVIVDC 182 D S A +A+ NA G+ D +++ + ++G D ++SNPPYI S IVD Sbjct: 171 TDSSPFACSLAQRNAHALGLDSAVDIIETSYADGVSPQLKGNVDALISNPPYIPSAIVDT 230 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 L EVRDF+P +LDGG DGL +R + + V ++ G VE+ + ++ Sbjct: 231 LTSEVRDFEPHAALDGGTDGLRVFRGLLELVPTYVRPGGFFCVELFEDNVQTAAQLCRQS 290 Query: 243 KLF-LVNAFKDYGGNDRVLLFC 263 LF V KD G R ++ Sbjct: 291 NLFSTVEVTKDLAGRSRFIIAT 312 >gi|302872095|ref|YP_003840731.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Caldicellulosiruptor obsidiansis OB47] gi|302574954|gb|ADL42745.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Caldicellulosiruptor obsidiansis OB47] Length = 288 Score = 256 bits (655), Expect = 2e-66, Method: Composition-based stats. Identities = 71/258 (27%), Positives = 122/258 (47%), Gaps = 8/258 (3%) Query: 7 SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66 + + ++ + +VI++ + + + NAI + L+ + F + Sbjct: 34 ALMMVSQILDIDKTEVILNKGLPVGQDKYEKIVNAISKYLQDYPLQYCTNKAFFMGLEFY 93 Query: 67 LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126 + + PR +TE+LV+ A+ + R + LD+GTG+G + +AL K K + Sbjct: 94 VDENVLIPRFDTEVLVEVAIEI----FKDRKNLYFLDIGTGSGCIAVALCKFL-DCKVLA 148 Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCLG 184 VDIS +ALE+A+ NA NGV R ++S+ F + FD I+SNPPYI L Sbjct: 149 VDISERALEVARKNAKLNGVENRISFVRSNLFEDIPKNLRFDAILSNPPYISESERFKLE 208 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 +V +P I+L +GL ++ IA +L G E+G++Q +V RI E Sbjct: 209 KQVLK-EPHIALFSKENGLWFFKEIASKAKLYLKDGGYIIFEVGFSQAEEVKRILEQNGY 267 Query: 245 FLVNAFKDYGGNDRVLLF 262 + + KD +R + Sbjct: 268 ENIKSRKDLNNIERCIFA 285 >gi|146337702|ref|YP_001202750.1| putative methyltransferase hemK modifies release factors RF-1 and RF-2 [Bradyrhizobium sp. ORS278] gi|146190508|emb|CAL74507.1| Putative protein methyltransferase hemK modifies release factors RF-1 and RF-2 [Bradyrhizobium sp. ORS278] Length = 295 Score = 256 bits (655), Expect = 2e-66, Method: Composition-based stats. Identities = 91/262 (34%), Positives = 128/262 (48%), Gaps = 2/262 (0%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 D+ + L +++ L L + R L E + RILG ++F+ Sbjct: 29 PELDARLLVGHALQLDLTGLVMHGKRALSHDDAQRLDALVQRRLAGEPVARILGHKEFWG 88 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L LS+DT PRP+TE +V+ AL +RI DLGTG+GA+ LALL E P Sbjct: 89 LELRLSADTLVPRPDTETVVELALDHLSAGGALTRPLRIGDLGTGSGAILLALLSELPRA 148 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182 GVG DIS AL A+ NA G+++R + + +++ FD+IVSNPPYI S + Sbjct: 149 SGVGTDISIAALTTARENARALGLNDRAAFVACSYATALAPPFDLIVSNPPYIPSADIAG 208 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 L EV DP +LDGG DGL+ YRT+ + L G VE+G Q DV + Sbjct: 209 LATEVHAHDPLRALDGGGDGLAAYRTLIPQAALLLQTGGAVIVEVGQGQSGDVAGLMTEA 268 Query: 243 KLF--LVNAFKDYGGNDRVLLF 262 L D G R ++ Sbjct: 269 GLASDSSAIRADLAGIPRAVMA 290 >gi|197120813|ref|YP_002132764.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Anaeromyxobacter sp. K] gi|196170662|gb|ACG71635.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Anaeromyxobacter sp. K] Length = 286 Score = 256 bits (655), Expect = 2e-66, Method: Composition-based stats. Identities = 78/259 (30%), Positives = 118/259 (45%), Gaps = 11/259 (4%) Query: 7 SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66 + L ++ +D D L + + + R + E + G RDFY Sbjct: 32 AELLLAHALRCERMRLYLDFDRPLGEPELAAFRELVRRRAEGEPTAYLTGRRDFYGRPFL 91 Query: 67 LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126 + + PRPETEL++++A R + LDL TG+GA+ ++L E P + V Sbjct: 92 VDARVLVPRPETELVLEAA------RDALPEGGAALDLCTGSGALGVSLALERPGARVVA 145 Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIESVIVDCLG 184 D+S AL +A NA G + D Q D ++ + FDVIVSNPPY+ +D L Sbjct: 146 TDLSADALAVAAENARALGAA--VDLRQGDLWAPLREGERFDVIVSNPPYVPRGELDTLP 203 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 EVR +PR++LDGG DGLS R I +G L G +E+ + R+ Sbjct: 204 REVRR-EPRLALDGGPDGLSLLRRIVEGAPTRLVPGGTLVLEMHEGHLELLPRLCRDAGF 262 Query: 245 FLVNAFKDYGGNDRVLLFC 263 A +D G R+ + Sbjct: 263 ERAEARRDLAGLPRLTVAR 281 >gi|51246577|ref|YP_066461.1| HemK methylase [Desulfotalea psychrophila LSv54] gi|50877614|emb|CAG37454.1| related to HemK methylase [Desulfotalea psychrophila LSv54] Length = 291 Score = 256 bits (655), Expect = 3e-66, Method: Composition-based stats. Identities = 82/270 (30%), Positives = 137/270 (50%), Gaps = 14/270 (5%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 AL D L G + ++ + P++ + + R ++ E + ILG ++F++ Sbjct: 22 ALVDVQLLLGHCLGKTRTELFLYPENPVSSGSEAAFNLLLARRVQREPLAYILGEQEFWS 81 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + ++S PRPETE +++ LA + E V +LDL TG+G + + L KE Sbjct: 82 LDFKVNSHVLIPRPETEFMLEKVLASAGAWRE--SVTPVLDLCTGSGVIAVVLAKELGRP 139 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIESVIV 180 V VDIS +AL++A+ NA + V+ F ++SD F+++E F +IVSNPPY+ + Sbjct: 140 -VVAVDISEEALQVARFNAHRHHVAINF--IRSDLFANIEPLHQFGLIVSNPPYVSRGAI 196 Query: 181 -DCLGLEVRDFDPRISLDGGI-DGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238 L EV ++P ++LDGG DGL R + D + ++L+ G +E G +Q + + Sbjct: 197 AHELEPEVASYEPHLALDGGAGDGLDFIRRMRDDLPKYLSLGGEVFIEFGADQGAAIADL 256 Query: 239 FESRK-----LFLVNAFKDYGGNDRVLLFC 263 F V+ +DY DRVL Sbjct: 257 FAEPGSDGSSFTDVHVLQDYARRDRVLYAR 286 >gi|218264487|ref|ZP_03478320.1| hypothetical protein PRABACTJOHN_04020 [Parabacteroides johnsonii DSM 18315] gi|218221980|gb|EEC94630.1| hypothetical protein PRABACTJOHN_04020 [Parabacteroides johnsonii DSM 18315] Length = 291 Score = 256 bits (654), Expect = 3e-66, Method: Composition-based stats. Identities = 72/264 (27%), Positives = 120/264 (45%), Gaps = 14/264 (5%) Query: 8 HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67 + RV + H + D L + ++ + + + R + E I ILG DFY+++ + Sbjct: 35 RLIMERVCNIQPHHFLFCKDKELPESEKSRIHDIVERLKQMEPIQYILGTADFYSLQFEV 94 Query: 68 SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 PRPETE LV+ + + + ++ILD+GTG+G + + L K + Sbjct: 95 DPSVLIPRPETEELVEQVILDNADK-----KIKILDIGTGSGCIAVTLRKHLKKASVIAT 149 Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSS------VEGLFDVIVSNPPYIESVIVD 181 DIS +AL A+ NA N + +Q+D + + DVIVSNPPYI+ Sbjct: 150 DISAEALVTARRNAKRNNTT--VTFIQTDILDPEKAEMDIPFILDVIVSNPPYIKEEEKK 207 Query: 182 CLGLEVRDFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 + V D++P ++L D L +Y IA + L ++G EI VV + E Sbjct: 208 DMERNVLDYEPHLALFVPDNDPLLYYWHIAHFGKKKLRRNGRLYFEINAACSNMVVEMLE 267 Query: 241 SRKLFLVNAFKDYGGNDRVLLFCR 264 + +D G DR++ + Sbjct: 268 EEGYKNIELIQDLSGRDRIIKARK 291 >gi|120601500|ref|YP_965900.1| HemK family modification methylase [Desulfovibrio vulgaris DP4] gi|120561729|gb|ABM27473.1| [protein release factor]-glutamine N5-methyltransferase [Desulfovibrio vulgaris DP4] Length = 295 Score = 256 bits (654), Expect = 3e-66, Method: Composition-based stats. Identities = 77/262 (29%), Positives = 123/262 (46%), Gaps = 9/262 (3%) Query: 7 SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66 + LC L +++ PD ++++ + + R E + I+G ++F+ Sbjct: 34 AEIILCHALSLRRIDIMLTPDRIVEEADCILFSELVARRATGEPLAYIVGEKEFFGRDFA 93 Query: 67 LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126 ++ T PRPETE L+++AL R +D GTG+G + + L E G+ Sbjct: 94 VNPSTLIPRPETEHLIETALESLRS-----GPARFVDAGTGSGCIAVTLCAERADLSGLA 148 Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVDCLG 184 +D+S AL A NA +GV++R ++ D+ +S+ G D+ SNPPYI L Sbjct: 149 LDMSAPALATASHNARRHGVAQRLAFVRGDFTTSLLRSGSLDLYASNPPYISKAEYTGLS 208 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK- 243 EVRDF+PR +L G GL H I +R L G+ +E G Q D+ +F Sbjct: 209 REVRDFEPRSALVPGDTGLEHATAIIAEATRVLRPHGILLMEFGCTQGADMASLFTPYST 268 Query: 244 -LFLVNAFKDYGGNDRVLLFCR 264 +V +D G DR + R Sbjct: 269 LWEMVEVRRDLAGLDRFIFARR 290 >gi|256820610|ref|YP_003141889.1| modification methylase, HemK family [Capnocytophaga ochracea DSM 7271] gi|256582193|gb|ACU93328.1| modification methylase, HemK family [Capnocytophaga ochracea DSM 7271] Length = 281 Score = 256 bits (654), Expect = 3e-66, Method: Composition-based stats. Identities = 72/255 (28%), Positives = 124/255 (48%), Gaps = 8/255 (3%) Query: 9 SFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLS 68 L S ++ + D++L + + AI + I ILG +F++ R ++ Sbjct: 29 ILLEHYGKYSKATILANSDTLLTEDIAQPILQAIRELQTAKPIQYILGETEFFSNRFFVN 88 Query: 69 SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128 + PRPETE LVD L +K + ++ILD+GTG+G + ++L K P +D Sbjct: 89 ENVLIPRPETEELVDWVLQ---EYPDKSEKIKILDVGTGSGCIAISLAKALPNAVVTAID 145 Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWF--SSVEGLFDVIVSNPPYIESVIVDCLGLE 186 +S +AL++AK NA N V F LQ D ++ +D+I+SNPPY+ + + Sbjct: 146 VSEEALKVAKRNAELNSVVTHF--LQQDILRIETLSDKYDIIISNPPYVRELEKKEIHHN 203 Query: 187 VRDFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245 V +++P ++L + L Y IA + LN +G EI ++ + E + Sbjct: 204 VLEYEPHLALFVPDNNPLLFYDKIATLAQQSLNPNGSLFFEINQYLGQEMQTLLEQKHFT 263 Query: 246 LVNAFKDYGGNDRVL 260 + +D GNDR++ Sbjct: 264 EITLRQDLFGNDRMI 278 >gi|312112636|ref|YP_003990952.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Geobacillus sp. Y4.1MC1] gi|311217737|gb|ADP76341.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Geobacillus sp. Y4.1MC1] Length = 288 Score = 256 bits (654), Expect = 3e-66, Method: Composition-based stats. Identities = 73/264 (27%), Positives = 117/264 (44%), Gaps = 7/264 (2%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSL-KHESIHRILGWRDFYNV 63 R + LC ++ Q++ +D+ R I + +H + + G+ FY Sbjct: 24 RAAELLLCHHLRITRAQLLARLRDPIDENARQLFEEDICKHAYEHVPVQHLTGFEQFYGR 83 Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 ++ D PRPETE LV+ L + V ++D+GTG+GA+ + L E+P Sbjct: 84 LFLVNRDVLIPRPETEELVEGVLTRITQLFPRNTTVDVVDVGTGSGAIAITLALENPALS 143 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIV 180 +DIS +AL++A+ NA G + D + DV+VSNPPYI + Sbjct: 144 VTAIDISAEALQMAEQNAKRLGAD--VAFICGDLLQPLIEANRKVDVVVSNPPYIPEDEI 201 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 L V+D +P +L GG DGL YR++ + L + L + E+G Q V + Sbjct: 202 ASLSPVVKDHEPLRALAGGKDGLDFYRSLTRALPFVLRERALVAFEVGAGQGETVAAMLR 261 Query: 241 SR-KLFLVNAFKDYGGNDRVLLFC 263 V D G DR++ Sbjct: 262 KTFPHAKVEVVFDINGKDRMVYAT 285 >gi|15602421|ref|NP_245493.1| hypothetical protein PM0556 [Pasteurella multocida subsp. multocida str. Pm70] gi|18202825|sp|Q9CN82|HEMK_PASMU RecName: Full=Protein methyltransferase hemK homolog; AltName: Full=M.PmuHemKP gi|12720822|gb|AAK02640.1| HemK [Pasteurella multocida subsp. multocida str. Pm70] Length = 298 Score = 256 bits (654), Expect = 3e-66, Method: Composition-based stats. Identities = 96/271 (35%), Positives = 138/271 (50%), Gaps = 16/271 (5%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 +S L VT S ++ ++VL + + L ++R K E I ILG + F+++ L Sbjct: 29 ESVLLLQTVTKRSKASILAFSETVLTEVELQQLAQLLMRRAKGEPIAYILGEKAFWSLSL 88 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDV---VRILDLGTGTGAVCLALL------ 116 +S T PRP+TE+LV+ AL F+ R+ V + ILDLGTGTGA+ LAL Sbjct: 89 KVSEHTLIPRPDTEVLVEHALDFAKQRVTSAHVSGELSILDLGTGTGAIALALAAELTPL 148 Query: 117 --KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNP 172 K +GVD +A+ +AK NA N + + + LQS WF ++ E FD+IVSNP Sbjct: 149 TQKCGINLNILGVDRIAEAVALAKDNAKQNEL--KVNFLQSVWFDALNPEIRFDLIVSNP 206 Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232 PYI+ +VR F+P +L +G + R I + L G +E G+ Q Sbjct: 207 PYIDKNDPHLTQGDVR-FEPLSALVAAEEGYADIRHIIEQAPLFLKPQGALLLEHGWQQA 265 Query: 233 VDVVRIFESRKLFLVNAFKDYGGNDRVLLFC 263 V IF+ V KDY GN+RV L C Sbjct: 266 EKVRSIFQKNLWHNVATLKDYSGNERVTLGC 296 >gi|114567902|ref|YP_755056.1| peptide release factor-glutamine N5-methyltransferase [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|114338837|gb|ABI69685.1| peptide release factor-glutamine N5-methyltransferase [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 282 Score = 256 bits (654), Expect = 3e-66, Method: Composition-based stats. Identities = 80/265 (30%), Positives = 126/265 (47%), Gaps = 10/265 (3%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 + ++ L V + + D ++ +R I R +K E + I+G ++F Sbjct: 25 EPRLEAEVLLAHVLLQNRVYLYTHFDKPVNQEERQQYREVIKRRIKGEPLAYIVGHKEFM 84 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 ++ L+ PRPETELLV+ AL + E ++ +RI D+GTG+GA+ ++L P Sbjct: 85 SLEFKLNQAVLIPRPETELLVEEALEIA----EGKEGLRICDVGTGSGAIAVSLAFYVPT 140 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVI 179 + DIS ALE A+ NA +GV+ Q D + E FD+IV+N PYI S Sbjct: 141 AQVYATDISADALEKARENATRHGVA--ITFYQGDLLFPLLNEEPFDIIVANLPYIGSKE 198 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 L V+D++P ++L DGL YR + + L +G +EIG+ Q + Sbjct: 199 FILLDSGVKDYEPALALLAPGDGLDLYRRLLPQAAALLAPEGCLLLEIGHEQGSRAREMM 258 Query: 240 ESRKLFLVNAFKDYGGNDRVLLFCR 264 + KD G DR+L R Sbjct: 259 Q--GWGETEIIKDLAGRDRLLKSRR 281 >gi|269468199|gb|EEZ79892.1| HemK family modification methylase [uncultured SUP05 cluster bacterium] Length = 262 Score = 256 bits (654), Expect = 3e-66, Method: Composition-based stats. Identities = 82/255 (32%), Positives = 123/255 (48%), Gaps = 13/255 (5%) Query: 10 FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69 L S+ + D L + L I + K + G + FY++ ++ Sbjct: 18 LLSLALNKSNTALYTQTDYQLTAIESKQLDTLIQQRKKGIPFAYLSGKKGFYHLDFKVTP 77 Query: 70 DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129 DT PRPETELL+D AL +K + +LDLGTG+G + + L ++P + DI Sbjct: 78 DTLIPRPETELLIDIALDLFN---DKEEPCHLLDLGTGSGIIAITLADKNPHWTVSATDI 134 Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVR 188 S AL++AK+N + Q WF +V FD+I+SNPPYIE + Sbjct: 135 SQAALDVAKTNTTA-----QVSFFQGSWFEAVPSQTFDLIISNPPYIEQDDPYL---DDL 186 Query: 189 DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN 248 F+P+ +L G DGL+ R I HLNK G +E G++Q+ +V + + K + Sbjct: 187 LFEPQTALVSGEDGLNDIRIIISDAPEHLNKGGYLLLEYGFDQQERIVDLL-NEKFHHIK 245 Query: 249 AFKDYGGNDRVLLFC 263 FKDY NDR +L Sbjct: 246 TFKDYNNNDRAVLAQ 260 >gi|16801747|ref|NP_472015.1| hypothetical protein lin2686 [Listeria innocua Clip11262] gi|16415222|emb|CAC97912.1| lin2686 [Listeria innocua Clip11262] Length = 283 Score = 256 bits (654), Expect = 3e-66, Method: Composition-based stats. Identities = 82/258 (31%), Positives = 115/258 (44%), Gaps = 10/258 (3%) Query: 7 SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66 + L GL+ ++ ++ L+ R L E + IL FY Sbjct: 25 AEILLETRMGLTRSELWMEMSRELEPNHEKQFQEDFARYLAGEPVQYILKTAPFYGYDFL 84 Query: 67 LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126 ++ D PRPETE LV +A AF +++ + +LD+ TG+G + +AL K P Sbjct: 85 VTEDVLIPRPETEELVATAEAF----LKQHPLRSLLDVCTGSGIIAIALKKAFPDMTVTA 140 Query: 127 VDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183 DIS AL IAK N++ RF D L+S F FD+IV+NPPYI + Sbjct: 141 SDISAAALAIAKKNSLLLNADVRFVETDLLES--FKQNNERFDMIVANPPYISEAEKAEM 198 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE-SR 242 V +P I+L DGL+ Y D + LN VEIGY Q V ++FE S Sbjct: 199 SDYVLKNEPSIALFAENDGLAIYERFVDNLKYVLNPSFWVGVEIGYTQGERVKQLFEKSY 258 Query: 243 KLFLVNAFKDYGGNDRVL 260 V KD DR + Sbjct: 259 PHATVLIHKDINSKDRYV 276 >gi|313617101|gb|EFR89653.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Listeria innocua FSL S4-378] Length = 283 Score = 256 bits (654), Expect = 3e-66, Method: Composition-based stats. Identities = 82/258 (31%), Positives = 115/258 (44%), Gaps = 10/258 (3%) Query: 7 SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66 + L GL+ ++ ++ L+ R L E + IL FY Sbjct: 25 AEILLETRMGLTRSELWMEMSRELEPNHEKQFQEDFARYLAGEPVQYILKTAPFYGYDFL 84 Query: 67 LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126 ++ D PRPETE LV +A AF +++ + +LD+ TG+G + +AL K P Sbjct: 85 VTEDVLIPRPETEELVATAEAF----LKQHPLRSLLDVCTGSGIIAIALKKAFPDMTVTA 140 Query: 127 VDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183 DIS AL IAK N++ RF D L+S F FD+IV+NPPYI + Sbjct: 141 SDISAAALAIAKKNSLLLNADVRFVETDLLES--FKQNNERFDMIVANPPYISEAEKAEM 198 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE-SR 242 V +P I+L DGL+ Y D + LN VEIGY Q V ++FE S Sbjct: 199 SDYVLKNEPSIALFAENDGLAIYERFVDNLKYVLNPSFWVGVEIGYTQGERVKQLFEKSY 258 Query: 243 KLFLVNAFKDYGGNDRVL 260 V KD DR + Sbjct: 259 PHATVLIHKDINSKDRYV 276 >gi|269926537|ref|YP_003323160.1| modification methylase, HemK family [Thermobaculum terrenum ATCC BAA-798] gi|269790197|gb|ACZ42338.1| modification methylase, HemK family [Thermobaculum terrenum ATCC BAA-798] Length = 283 Score = 256 bits (654), Expect = 3e-66, Method: Composition-based stats. Identities = 74/260 (28%), Positives = 121/260 (46%), Gaps = 7/260 (2%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 DS L V G+ ++ + + + + + R +HE I ILG+++FY Sbjct: 22 NPSLDSELLLASVLGIDRTSLLANLNQEVSLPDQEKFLGLVERRSRHEPIAYILGYKEFY 81 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 +S PRPETE+LVD A + + D+GTG+GA+ +++ E P Sbjct: 82 GRLFCVSRSVLIPRPETEMLVDLAKKLAT------KGAVVADVGTGSGAIAISIAIERPD 135 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181 K V DIS AL++A+ N +GV +R LQ + V + D++V+N PYI D Sbjct: 136 VKVVATDISHDALDVARRNVQKHGVQDRVFLLQGNLLDPVHEMVDMVVANLPYIPESEAD 195 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV-RIFE 240 L +V ++PR +L GG DGL + R + + +H + C +E+ + I Sbjct: 196 SLQPDVILWEPRTALFGGEDGLEYIRELLGQLPKHCSYGAYCLLEVDPRLVDKLKHEIKL 255 Query: 241 SRKLFLVNAFKDYGGNDRVL 260 + +D G RV+ Sbjct: 256 RFPDASIVVLQDLAGLPRVV 275 >gi|171779353|ref|ZP_02920317.1| hypothetical protein STRINF_01198 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171281970|gb|EDT47401.1| hypothetical protein STRINF_01198 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 276 Score = 255 bits (653), Expect = 3e-66, Method: Composition-based stats. Identities = 77/247 (31%), Positives = 123/247 (49%), Gaps = 8/247 (3%) Query: 17 LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRP 76 S I+ + + + + L + + + H S I G F ++ L + PRP Sbjct: 34 WSLLDFILHQNKEVTESDQKILESIMAQLEDHRSPQYITGKAYFRDLELAVDERVLIPRP 93 Query: 77 ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136 ETE LVD L + + +R+LD+GTG+GA+ ++L P ++ DIS AL++ Sbjct: 94 ETEELVDLVLKEN-----SKADLRVLDIGTGSGAIAISLKSARPDWQVTASDISQGALQL 148 Query: 137 AKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL 196 A+ N+ N VS D ++SD F + G FDVI+SNPPYI D +G+ V +P ++L Sbjct: 149 AEENSKLNQVS--LDFVESDVFGQITGTFDVIISNPPYIAYGDKDEVGMNVLASEPHLAL 206 Query: 197 DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDYGG 255 DG + YR I +G HL+++G EIGY Q + + + +D G Sbjct: 207 FADEDGFAIYRQIIEGAGEHLSENGKLYFEIGYKQGDGLRALLSKHFPQKRIRVLEDIFG 266 Query: 256 NDRVLLF 262 DR ++ Sbjct: 267 KDRKVVM 273 >gi|319648108|ref|ZP_08002325.1| YwkE protein [Bacillus sp. BT1B_CT2] gi|317389743|gb|EFV70553.1| YwkE protein [Bacillus sp. BT1B_CT2] Length = 288 Score = 255 bits (653), Expect = 3e-66, Method: Composition-based stats. Identities = 75/268 (27%), Positives = 119/268 (44%), Gaps = 13/268 (4%) Query: 2 QALRD---SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWR 58 +A RD + L + +++ V+ + ++ + + I G Sbjct: 17 EAGRDRNAAEILLTDQLNIDRSKLLASFHDVISESDFARFKKSVELHHQGVPVQYITGKE 76 Query: 59 DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118 FY + +++ PRPETE +V++ L+ + D ++ +D+GTG+GA+ + L E Sbjct: 77 SFYGRKFSVNEHVLIPRPETEEVVEAVLSEAERVFHGTDRLKAVDVGTGSGAIAVTLALE 136 Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYI 175 SP F DIS +AL A+ NA G + D L D + + DVIVSNPPYI Sbjct: 137 SPRFSVTATDISEQALSTARHNADRLGA--KVDFLCGDLLEPLIARQKKADVIVSNPPYI 194 Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235 + L VR +P +L G DGL Y+ + + L EIG+ Q V Sbjct: 195 SEEDMRTLSDVVRLHEPAGALTDGADGLQFYKRFMKEIPSVIADQALVVFEIGWTQGNAV 254 Query: 236 VRIFESRKLF---LVNAFKDYGGNDRVL 260 +F + F V KD G DR++ Sbjct: 255 KDMF--HRFFPDADVRVKKDLNGKDRIV 280 >gi|309800292|ref|ZP_07694465.1| HemK protein [Streptococcus infantis SK1302] gi|308116076|gb|EFO53579.1| HemK protein [Streptococcus infantis SK1302] Length = 278 Score = 255 bits (653), Expect = 4e-66, Method: Composition-based stats. Identities = 79/248 (31%), Positives = 126/248 (50%), Gaps = 8/248 (3%) Query: 16 GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75 +S + + + ++ F+ + H I+G +F+ ++L + PR Sbjct: 33 NISFTDFVFALQQEVTEEEKEFVEEIYTKLANHIPAQYIIGHAEFFGMQLEVDERVLIPR 92 Query: 76 PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135 PETE LV+ LA + + +++LD+GTG+GA+ LAL K P + DIS AL+ Sbjct: 93 PETEELVELILAEN-----PEENLKVLDIGTGSGAIALALAKNRPDWTITAADISQDALD 147 Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195 +A NA G++ ++S+ FS + +D+IVSNPPYI V +GL V +P ++ Sbjct: 148 LAMENADNLGLT--LFFIKSNCFSEISSKYDIIVSNPPYISRVDEAEVGLNVLHSEPHLA 205 Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDYG 254 L DGL+ YR IA+ +LN G +EIGY Q V +F+ V KD Sbjct: 206 LFADEDGLAIYRRIAEESKDYLNDGGKIYLEIGYKQGQSVPALFKKNFPEKRVRTLKDQF 265 Query: 255 GNDRVLLF 262 G DR+++ Sbjct: 266 GQDRMVVI 273 >gi|162456339|ref|YP_001618706.1| putative methyltransferase HemK [Sorangium cellulosum 'So ce 56'] gi|161166921|emb|CAN98226.1| putative methyltransferase HemK [Sorangium cellulosum 'So ce 56'] Length = 294 Score = 255 bits (653), Expect = 4e-66, Method: Composition-based stats. Identities = 84/260 (32%), Positives = 133/260 (51%), Gaps = 6/260 (2%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A D+ L +V G+ +++D + LD + R E + +LG R+FY Sbjct: 34 ARLDAELLLGKVLGIDRVGLLIDAERPLDRAELAAYRELHQRRRAGEPVAYLLGVREFYG 93 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + PRP+TE+LV+ ALA + R+LDL TG+G V ++L E P Sbjct: 94 RPFRVDPRVLIPRPDTEILVEVALARTRHLALS---ARVLDLCTGSGCVAISLACERPTS 150 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIV 180 + +GVDIS AL +A+ NA+ G + L+SD F+ V +D+I +NPPYI V Sbjct: 151 RVLGVDISDGALAVARENALRLG-AVNAGFLRSDLFAGVPSGLRYDLITANPPYIPDEDV 209 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 L +++R ++P ++L GG DGL R I G L G+ ++E+ + V +F Sbjct: 210 AALQIDIRGYEPHLALAGGPDGLVFTRRIVAGAPALLAAGGVLAMEVEAGKAGAVAELFT 269 Query: 241 SRKLFLVNAFKDYGGNDRVL 260 + V+ DYGG++RV+ Sbjct: 270 AAGFGGVSRHLDYGGHERVV 289 >gi|254180489|ref|ZP_04887087.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Burkholderia pseudomallei 1655] gi|184211028|gb|EDU08071.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Burkholderia pseudomallei 1655] Length = 285 Score = 255 bits (653), Expect = 4e-66, Method: Composition-based stats. Identities = 80/261 (30%), Positives = 123/261 (47%), Gaps = 11/261 (4%) Query: 4 LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63 D+ L G S Q+I D LD R R E I ++ G R+F+ + Sbjct: 22 ALDARILLAHALGWSRTQLITRADEPLDAAARARYLALQARRAAGEPIAQLTGAREFFGL 81 Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 ++ D PRPETELLV++AL I+ +LDLGTG+GA+ +++ E P Sbjct: 82 EFDITPDVLIPRPETELLVETALD----AIDGIASPCVLDLGTGSGAIAVSIASERPDAC 137 Query: 124 GVGVDISCKALEIAKSNAVTNGVSER----FDTLQSDWFSSVEG--LFDVIVSNPPYIES 177 ++ S AL++A+ NA R L+SDW+++++ F V+VSNPPYI Sbjct: 138 VWALERSVAALDVARRNARKLLDPARAGGPLRFLESDWYAALDPGLRFHVVVSNPPYIAR 197 Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237 ++R F+PR +L DGL+ RTI G + G +E GY+Q V Sbjct: 198 HDPHLAEGDLR-FEPRGALTDENDGLAAIRTIVAGAHAFVAPGGALWLEHGYDQAAAVRA 256 Query: 238 IFESRKLFLVNAFKDYGGNDR 258 + ++ V + D +R Sbjct: 257 LLDAAGFADVESRADLASIER 277 >gi|312127876|ref|YP_003992750.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Caldicellulosiruptor hydrothermalis 108] gi|311777895|gb|ADQ07381.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Caldicellulosiruptor hydrothermalis 108] Length = 288 Score = 255 bits (653), Expect = 4e-66, Method: Composition-based stats. Identities = 71/258 (27%), Positives = 122/258 (47%), Gaps = 8/258 (3%) Query: 7 SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66 + + ++ + +VI++ + + + NAI + L+ + F + Sbjct: 34 ALMMVSQILDIDKTEVILNKGLPVGQDKYEKIVNAISKYLQDYPLQYCTNKAFFMGLEFY 93 Query: 67 LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126 + + PR +TE+LV+ A+ + R + LD+GTG+G + +AL K K + Sbjct: 94 VDENVLIPRFDTEVLVEVAIEI----FKGRKNLYFLDIGTGSGCIAVALCKFL-DCKVLA 148 Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCLG 184 VDIS +ALE+A+ NA NGV R ++S+ F + D I+SNPPYI L Sbjct: 149 VDISERALEVARKNAKLNGVENRISFVRSNLFEDIPKNLRLDAILSNPPYISESERFKLE 208 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 +V +P I+L DGL ++ IA+ +L G E+G++Q +V RI E Sbjct: 209 KQVLK-EPHIALFSKEDGLWFFKEIANKAKLYLKDGGYIIFEVGFSQAEEVKRILEQNGY 267 Query: 245 FLVNAFKDYGGNDRVLLF 262 + + KD +R + Sbjct: 268 ENIKSRKDLNNIERCIFA 285 >gi|258406202|ref|YP_003198944.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Desulfohalobium retbaense DSM 5692] gi|257798429|gb|ACV69366.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Desulfohalobium retbaense DSM 5692] Length = 300 Score = 255 bits (653), Expect = 4e-66, Method: Composition-based stats. Identities = 72/263 (27%), Positives = 124/263 (47%), Gaps = 5/263 (1%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A D+ + +S ++ + D + + + + R K E + I+G ++FY Sbjct: 35 ARLDAEILVADALSVSRLELYLQHDRWIQAEELRRIAIRLERRSKFEPVAYIVGCKEFYG 94 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + + PRPETE ++D+ + P + R D TG+G + + L P Sbjct: 95 LDFHVRPGVLIPRPETETIIDAVREWFTP----ESIFRFADTCTGSGILGVVLATYFPRS 150 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS-VEGLFDVIVSNPPYIESVIVD 181 +GV +DIS +AL IA+SN +G+ +R +Q D D++V+NPPY+ V+ Sbjct: 151 QGVLIDISDEALAIARSNVQLHGLKQRLLAVQGDLLHPTARNQLDLVVANPPYLAPREVE 210 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR +PR++L+GG G + + + R L G+ VE+G+ Q+ V F Sbjct: 211 ETMPDVRLHEPRLALEGGDTGCLFLQRLVEQAQRALKPGGMVCVEMGWQQEQWVQGQFHG 270 Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264 KD G+DRV++ R Sbjct: 271 PAWERTAVLKDLAGHDRVVVAHR 293 >gi|227513056|ref|ZP_03943105.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Lactobacillus buchneri ATCC 11577] gi|227524271|ref|ZP_03954320.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Lactobacillus hilgardii ATCC 8290] gi|227083631|gb|EEI18943.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Lactobacillus buchneri ATCC 11577] gi|227088502|gb|EEI23814.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Lactobacillus hilgardii ATCC 8290] Length = 288 Score = 255 bits (653), Expect = 4e-66, Method: Composition-based stats. Identities = 86/260 (33%), Positives = 141/260 (54%), Gaps = 5/260 (1%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D + + G S+ +++ + Q N + R + E + I+G +FY + L Sbjct: 30 DIDFLIQKRFGFSTTDMLIHYHDKMLSGQWLQFQNDVKRLISGEPVQYIVGQANFYGLTL 89 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 + S+ PR ETE LVD L + + +++LD+GTG+GA+ +AL P ++ Sbjct: 90 NVDSNVLIPRVETEELVDWILDQT--TVYTNRPLKVLDIGTGSGAIAIALKANRPEWQVN 147 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185 DIS AL++A+ NA + V+ F + SD F+ + FD+IVSNPPYI + V + Sbjct: 148 ASDISESALKVAQQNAQLHHVAINF--ILSDMFAHINEAFDLIVSNPPYISASEVGDMDS 205 Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF-ESRKL 244 V++ +PRI+L DGL+ Y+++A GV HLN G VEIG++Q+ V +IF E+ Sbjct: 206 SVKNNEPRIALFAADDGLAIYKSLAKGVDAHLNVGGQLFVEIGFHQETSVRKIFQEALPN 265 Query: 245 FLVNAFKDYGGNDRVLLFCR 264 +V A D G+ R++ + Sbjct: 266 AIVTAKHDVSGHQRMVRLRK 285 >gi|312795902|ref|YP_004028824.1| peptide release factor-glutamine N5-methyltransferase [Burkholderia rhizoxinica HKI 454] gi|312167677|emb|CBW74680.1| Peptide release factor-glutamine N5-methyltransferase (EC 2.1.1.-) [Burkholderia rhizoxinica HKI 454] Length = 321 Score = 255 bits (653), Expect = 4e-66, Method: Composition-based stats. Identities = 78/293 (26%), Positives = 118/293 (40%), Gaps = 36/293 (12%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A ++ L V +I D L + R ++ E I +++G R+F+ Sbjct: 34 APLEARILLAHVLDWPRTALITRADDTLPNALSARFLALQARRVEGEPIAQLVGSREFFG 93 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + ++ PRPETELLV+ AL ++ RILDLGTG+GA+ +A+ P Sbjct: 94 LDFDVTPHVLIPRPETELLVECALN----AVQTIPSPRILDLGTGSGAIAIAIAHTRPDA 149 Query: 123 KGVGVDISCKALEIAKSNAVTN------------------------GVSERFDTLQSDWF 158 + V D AL++A+ NA R WF Sbjct: 150 RIVATDRCAGALDVARRNARRLLGDAALAPALPVSAARHDFVTSGTPTQPRLALRHGTWF 209 Query: 159 SSV-------EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIAD 211 ++ FD IVSNPPYI + ++R F+P +L DGLS R I Sbjct: 210 DALSEPHRLAPARFDAIVSNPPYIAASDPHLREGDLR-FEPLDALTDHADGLSAIRAIVT 268 Query: 212 GVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 G L +E GY+Q V + ++ V + +D G +RV R Sbjct: 269 GSVAWLAPGATLWLEHGYDQAEAVRALLDAHGFDSVRSVRDLAGIERVTCGSR 321 >gi|33591872|ref|NP_879516.1| heme biosynthesis protein [Bordetella pertussis Tohama I] gi|33571516|emb|CAE40990.1| heme biosynthesis protein [Bordetella pertussis Tohama I] gi|332381289|gb|AEE66136.1| heme biosynthesis protein [Bordetella pertussis CS] Length = 270 Score = 255 bits (653), Expect = 4e-66, Method: Composition-based stats. Identities = 75/259 (28%), Positives = 120/259 (46%), Gaps = 9/259 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 ++ V G S ++ ++ R L E + +LG R+F Sbjct: 14 PRLEARMLAEHVLGRSRAWLLAHDTDPVEPAHEAAWRQLAARRLAGEPMAYLLGGREFMG 73 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 L+ D PRP+TELLV++AL + ++ R R+LDLGTG+GA+ +++ P Sbjct: 74 HWYALTPDVLIPRPDTELLVETALHW----LQGRAAPRVLDLGTGSGAIAVSVALGCPQA 129 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIESVIV 180 + D+S AL +A+ NA G R L DW+ ++ +D+IVSNPPYI Sbjct: 130 EVTATDLSAAALAVAEGNAQRLGA--RVRCLAGDWYEALPAQDRYDLIVSNPPYIAREDA 187 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 ++R F+PR +L DGL+ IA G L G +E G++Q + Sbjct: 188 HLAQGDLR-FEPRGALTDENDGLAALARIAGGAPGRLLPGGAIWMEHGWDQAEAARALLR 246 Query: 241 SRKLFLVNAFKDYGGNDRV 259 L V++ +D G +R+ Sbjct: 247 QAGLREVHSRRDLAGIERI 265 >gi|269215989|ref|ZP_06159843.1| protein-(glutamine-N5) methyltransferase [Slackia exigua ATCC 700122] gi|269130248|gb|EEZ61326.1| protein-(glutamine-N5) methyltransferase [Slackia exigua ATCC 700122] Length = 329 Score = 255 bits (652), Expect = 4e-66, Method: Composition-based stats. Identities = 76/298 (25%), Positives = 126/298 (42%), Gaps = 40/298 (13%) Query: 7 SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66 + L TGLS ++ D L +R L +A+ R E + I G F + L Sbjct: 30 AQHLLSFATGLSRIELYAHHDRPLSPDERDTLRDAVRRRAAGEPLQYIQGTAPFRFIELE 89 Query: 67 LSSDTFEPRPETELLVDSALAFSL----------------PRIEKRDVV----------- 99 ++ PRPETE+LVD A P + + Sbjct: 90 VAPGVLIPRPETEVLVDEAFRELKNLGAYAVRRPGPHAGEPSLPPSEGAAASGSARPGVA 149 Query: 100 -----------RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148 + D+ TG+G + A+ E P + V DIS A+ +A+ N G+ + Sbjct: 150 AEANGTHAGGLVVADVCTGSGCIACAIASEHPDARVVATDISPDAVALARRNVARLGLGD 209 Query: 149 RFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206 R D + D + + + FD+++SNPPY+ + +++ + EV F+P ++LDGG DGL + Sbjct: 210 RVDVREGDLCAPLAADAPFDLVISNPPYVPTAVLNDMPREVSVFEPALALDGGCDGLDAF 269 Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 R + D L+ G+ + E+ + + S L V D G RVL+ + Sbjct: 270 RRLIDEAVPLLSFPGVLACELHEDCLDKAADLARSAGLARVRIASDLAGRSRVLIAAK 327 >gi|298386834|ref|ZP_06996389.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacteroides sp. 1_1_14] gi|298260508|gb|EFI03377.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacteroides sp. 1_1_14] Length = 278 Score = 255 bits (652), Expect = 5e-66, Method: Composition-based stats. Identities = 80/260 (30%), Positives = 123/260 (47%), Gaps = 12/260 (4%) Query: 9 SFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLS 68 C + G+ + + + D +L ++ L N I R K+E I I G+ +F ++ Sbjct: 27 LICCDMLGVDALDIYMGKDIILSACKQRELENIIFRLQKNEPIQYIRGYAEFCGRNFRVA 86 Query: 69 SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128 PRPET LVD + E D R+LD+GTG+G + ++L K+ P K D Sbjct: 87 PGVLIPRPETAELVDLIVK------ENPDARRLLDIGTGSGCIAISLDKKLPDAKVDAWD 140 Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSS--VEGL-FDVIVSNPPYIESVIVDCLGL 185 IS +AL IA+ N + + + D FS+ ++G +D+IVSNPPY+ + Sbjct: 141 ISEEALAIARKNNEE--LDAQVTFCRQDVFSADGIQGTSYDIIVSNPPYVTETEKTEMEA 198 Query: 186 EVRDFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 V D++P ++L D L YR IA+ L G EI D++R+ E + Sbjct: 199 NVLDWEPELALFVPDEDPLRFYRRIAELGRELLRPGGKLYFEINQAYGQDMIRMIEMNQY 258 Query: 245 FLVNAFKDYGGNDRVLLFCR 264 V KD G DR+L R Sbjct: 259 RDVRVIKDIFGKDRILTANR 278 >gi|161869127|ref|YP_001598293.1| HemK protein [Neisseria meningitidis 053442] gi|161594680|gb|ABX72340.1| HemK protein [Neisseria meningitidis 053442] Length = 234 Score = 255 bits (652), Expect = 5e-66, Method: Composition-based stats. Identities = 85/236 (36%), Positives = 113/236 (47%), Gaps = 12/236 (5%) Query: 30 LDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFS 89 + D R L E + ILG R+FY R T++ PRPETE LV++ LA Sbjct: 1 MPDEVRQRADRLAQCRLNGEPVAYILGVREFYGRRFTVNPSVLIPRPETEHLVEAVLARL 60 Query: 90 LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149 + R+ DLGTG+GAV + + E P DIS ALE A+ NA G R Sbjct: 61 ------PENGRVWDLGTGSGAVAVTVALERPDAFVRASDISPPALETARENAADLGA--R 112 Query: 150 FDTLQSDWFS---SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206 + WF EG +D+IVSNPPYIE+ L ++R F+P+I+L DGLS Sbjct: 113 VEFAHGSWFDTDMPSEGKWDIIVSNPPYIENGDKHLLQGDLR-FEPQIALTDFSDGLSCI 171 Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262 RT+A G L + G +E G++Q V + V D G DRV L Sbjct: 172 RTLAQGAPDRLAEGGFLLLEHGFDQGAAVRGVLAENGFSGVETLPDLAGLDRVTLG 227 >gi|256545371|ref|ZP_05472734.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Anaerococcus vaginalis ATCC 51170] gi|256398932|gb|EEU12546.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Anaerococcus vaginalis ATCC 51170] Length = 263 Score = 255 bits (652), Expect = 6e-66, Method: Composition-based stats. Identities = 78/253 (30%), Positives = 132/253 (52%), Gaps = 8/253 (3%) Query: 11 LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70 L + + + + ++ + LD++ L + + + +G +FY + L + Sbjct: 18 LTYLLNTNKNLLFLNKEEALDEKIENELKIINDKINEGYPLQYAIGKWNFYGLDLLVDKR 77 Query: 71 TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130 PR ETE+LVD + + + +ILD+GTG+GA+ LAL K K +GVDIS Sbjct: 78 ALIPRYETEILVDLIIN------DNSNNKKILDIGTGSGAISLALSKNLKDSKIIGVDIS 131 Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDF 190 A+++A N + + + +SD FS++E FD+IVSNPPYI + L ++ + Sbjct: 132 KNAIDLANENKIKLNI-NNVEFKESDIFSNIEEKFDIIVSNPPYINKEDFEKLDNKLY-Y 189 Query: 191 DPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAF 250 +P+ +L GG DGL Y+ I LNK+G +EIGY+QK + + E + ++ Sbjct: 190 EPQNALYGGEDGLYFYKKIIKNAKNFLNKNGKIYLEIGYDQKDYISNLLEEYGYKQIKSY 249 Query: 251 KDYGGNDRVLLFC 263 KD+ DR++ C Sbjct: 250 KDFNDFDRIIKAC 262 >gi|167762047|ref|ZP_02434174.1| hypothetical protein BACSTE_00395 [Bacteroides stercoris ATCC 43183] gi|167700139|gb|EDS16718.1| hypothetical protein BACSTE_00395 [Bacteroides stercoris ATCC 43183] Length = 303 Score = 255 bits (652), Expect = 6e-66, Method: Composition-based stats. Identities = 78/267 (29%), Positives = 113/267 (42%), Gaps = 12/267 (4%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 +A S C + G ++ + D +L ++ L + R E I + G F Sbjct: 45 EAANLSRIVCCEMLGQTAVDYYLGKDMILSPKEMQDLDTILARLRNFEPIQYVQGTARFL 104 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 ++ PRPETE LV+ L E RILD+GTG+G + ++L K P Sbjct: 105 ERSYYVAPGVLIPRPETEELVEVMLK------EVPSGARILDIGTGSGCIAISLSKMLPD 158 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG---LFDVIVSNPPYIESV 178 K DIS AL IA+ N S F +Q D + V G +DVIVSNPPY+ Sbjct: 159 AKVTAWDISDTALRIARRNNEALQASVCF--VQRDVLAYVPGSGERYDVIVSNPPYVTES 216 Query: 179 IVDCLGLEVRDFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237 + V D++P +L D L YR IA+ L G EI Sbjct: 217 EKQEMERNVLDWEPFSALFVPDNDPLLFYRRIAELGKGMLASGGRLYFEINRAFGEATAT 276 Query: 238 IFESRKLFLVNAFKDYGGNDRVLLFCR 264 + ++ + KD GNDR+++ R Sbjct: 277 MLRAQGYTNLRVLKDISGNDRIVIAER 303 >gi|23015679|ref|ZP_00055448.1| COG2890: Methylase of polypeptide chain release factors [Magnetospirillum magnetotacticum MS-1] Length = 283 Score = 255 bits (652), Expect = 6e-66, Method: Composition-based stats. Identities = 87/259 (33%), Positives = 129/259 (49%), Gaps = 3/259 (1%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 DS V G+ ++ + L L + R E + ILG R F+ Sbjct: 26 DSRLMAAEVLGVEMRRLPASHHAELSPEDAARLAAMLDRRAAREPMSHILGRRGFWTHDF 85 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 ++ DT +PRP+TE L+++ L R +R++D GTGTG + L LL E G+ Sbjct: 86 LVTKDTLDPRPDTETLIEAVLGALDDR---GRPLRLVDFGTGTGCILLTLLSELGHATGL 142 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185 G+D S AL +A NA G++ R DW ++G+FD+IVSNPPYI +D L Sbjct: 143 GIDASEAALAVAGDNAERLGLASRAQFRLGDWGWGLDGVFDIIVSNPPYIPDGDIDGLEP 202 Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245 EV ++PR +L GG DGL YR + ++R L GL ++E+G Q DV + + L Sbjct: 203 EVSRYEPRSALAGGADGLDCYRALIPHMARLLVPGGLAALEVGAGQASDVAAMLAAAGLP 262 Query: 246 LVNAFKDYGGNDRVLLFCR 264 D GG +R ++ R Sbjct: 263 GAGFRCDLGGIERCVIVQR 281 >gi|120434996|ref|YP_860682.1| modification methylase HemK [Gramella forsetii KT0803] gi|117577146|emb|CAL65615.1| modification methylase HemK [Gramella forsetii KT0803] Length = 282 Score = 255 bits (651), Expect = 6e-66, Method: Composition-based stats. Identities = 72/257 (28%), Positives = 116/257 (45%), Gaps = 5/257 (1%) Query: 9 SFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLS 68 G+ + ++P + ++ +A+ R KHE I I G +F+ + ++ Sbjct: 29 ILTEEYLGMQKVDIALNPTQEISKEEQTKFESALNRLKKHEPIQYITGNTEFFTRKFLVN 88 Query: 69 SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128 PRPETE LV+ ++ ++ILD+GTG+G + ++L KE K D Sbjct: 89 KSVLIPRPETEELVEWIIS---DHRSTGQELKILDIGTGSGCIPISLAKELEDAKVSSFD 145 Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVR 188 IS +AL IAK NA N F L +EG FD+IVSNPPY+ + + V Sbjct: 146 ISSEALLIAKRNAKLNAADVLFRKLNILEAEELEGQFDIIVSNPPYVRELEKKEMHQNVL 205 Query: 189 DFDPRISLDG-GIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLV 247 D +P+++L + L Y+ IA+ + LN G EI + + + Sbjct: 206 DHEPKLALYVEDENALIFYKKIAELAVKSLNPAGCLYFEINQYLAEETKSLVQQFGFET- 264 Query: 248 NAFKDYGGNDRVLLFCR 264 KD G+ R+L + Sbjct: 265 ELKKDIFGHYRMLKATK 281 >gi|225849652|ref|YP_002729886.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Persephonella marina EX-H1] gi|225646153|gb|ACO04339.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Persephonella marina EX-H1] Length = 280 Score = 255 bits (651), Expect = 6e-66, Method: Composition-based stats. Identities = 85/260 (32%), Positives = 122/260 (46%), Gaps = 7/260 (2%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L V L ++I + + + + + I R + E + I G + FY + Sbjct: 25 DTQILLSYVLKLPRWKLITEREEEIPKEKVMEFFSLIERRAQREPLAYITGEKAFYGLDF 84 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 + PRPETE+LVD L RI + V L++G G+G + ++LLK Sbjct: 85 KIKKGVLIPRPETEILVDEVLK----RIPEDKRVLGLEIGVGSGVISISLLKYRHNLFMY 140 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLG 184 GVDIS KALE+ + NA + VS R L+SD F V FD IVSNPPY+ + L Sbjct: 141 GVDISEKALELTRENAKIHRVSSRLKLLKSDLFKDVPHIKFDFIVSNPPYVSAEEYAGLE 200 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 EV+ +L GG G+ Y I +L + G EIGY Q V +I + Sbjct: 201 EEVKKEP-VEALIGGKGGIEFYERIVKEGKIYLKEKGFFGFEIGYTQSDRVKKILQDEGF 259 Query: 245 FLVNAFKDYGGNDRVLLFCR 264 V +KD DRV++ R Sbjct: 260 -NVKVYKDLQDYDRVVIGER 278 >gi|52082234|ref|YP_081025.1| YwkE protein [Bacillus licheniformis ATCC 14580] gi|52787626|ref|YP_093455.1| YwkE [Bacillus licheniformis ATCC 14580] gi|52005445|gb|AAU25387.1| YwkE [Bacillus licheniformis ATCC 14580] gi|52350128|gb|AAU42762.1| YwkE [Bacillus licheniformis ATCC 14580] Length = 288 Score = 255 bits (651), Expect = 6e-66, Method: Composition-based stats. Identities = 75/268 (27%), Positives = 118/268 (44%), Gaps = 13/268 (4%) Query: 2 QALRD---SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWR 58 +A RD + L + +++ V+ + ++ + + I G Sbjct: 17 EAGRDRNAAEILLTDQLNIDRSKLLASFHDVISESDFARFKKSVELHHQGVPVQYITGKE 76 Query: 59 DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118 FY +++ PRPETE +V++ L+ + D ++ +D+GTG+GA+ + L E Sbjct: 77 SFYGREFSVNEHVLIPRPETEEVVEAVLSEAERVFHGTDRLKAVDVGTGSGAIAVTLALE 136 Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYI 175 SP F DIS +AL A+ NA G + D L D + + DVIVSNPPYI Sbjct: 137 SPRFSVTATDISEQALSTARHNADRLGA--KVDFLCGDLLEPLIARQKKADVIVSNPPYI 194 Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235 + L VR +P +L G DGL Y+ + + L EIG+ Q V Sbjct: 195 SEEDMRTLSDVVRLHEPAGALTDGADGLQFYKRFMKEIPSVIADQALVVFEIGWTQGNAV 254 Query: 236 VRIFESRKLF---LVNAFKDYGGNDRVL 260 +F + F V KD G DR++ Sbjct: 255 KDMF--HRFFPDADVRVKKDLNGKDRIV 280 >gi|254450152|ref|ZP_05063589.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Octadecabacter antarcticus 238] gi|198264558|gb|EDY88828.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Octadecabacter antarcticus 238] Length = 268 Score = 255 bits (651), Expect = 6e-66, Method: Composition-based stats. Identities = 87/263 (33%), Positives = 132/263 (50%), Gaps = 9/263 (3%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 +RD+ + + ++ + +D I + + +LG+RDFY Sbjct: 13 DPVRDARVLMAACLDIPFGRLTLHAHDEFEDAPEAAFFADIGQRAARTPVSHLLGYRDFY 72 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 R ++ D +PR +TE L+++ALA +LDLGTG+G + + LL E Sbjct: 73 GRRFQVTPDVLDPRGDTETLIEAALAV--------PFADVLDLGTGSGCILVTLLAERGA 124 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181 G+GVD+S +A+ +A+ NA+ GV +R SDWF V FD+IVSNPPYI + Sbjct: 125 VTGIGVDVSPRAVTVAEQNALRLGVQDRCAFAVSDWFKGVGVPFDLIVSNPPYIALDEMA 184 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 L E ++PR++L DGL+ YR I G + HL + G VEIG Q V+ +FE Sbjct: 185 GLAPE-LGYEPRLALTDEGDGLAAYREITAGAAGHLRQGGWLMVEIGPTQGGAVIALFEV 243 Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264 L V D G DRV++ + Sbjct: 244 AGLEQVGIRVDLDGRDRVVVGKK 266 >gi|295400674|ref|ZP_06810651.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Geobacillus thermoglucosidasius C56-YS93] gi|294977255|gb|EFG52856.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Geobacillus thermoglucosidasius C56-YS93] Length = 288 Score = 255 bits (651), Expect = 6e-66, Method: Composition-based stats. Identities = 73/264 (27%), Positives = 118/264 (44%), Gaps = 7/264 (2%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSL-KHESIHRILGWRDFYNV 63 R + LC ++ Q++ +D+ R I + + +H + + G+ FY Sbjct: 24 RAAELLLCHHLRITRAQLLARLRDPIDENARQLFEEDICKHVYEHVPVQHLTGFEQFYGR 83 Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 ++ D PRPETE LV+ L + V ++D+GTG+GA+ + L E+P Sbjct: 84 LFLVNRDVLIPRPETEELVEGVLTRITQLFPRNTTVDVVDVGTGSGAIAITLALENPALS 143 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIV 180 +DIS +AL++A+ NA G + D + DV+VSNPPYI + Sbjct: 144 ITAIDISAEALQMAEQNAKRLGAD--VAFICGDLLQPLIEANRKVDVVVSNPPYIPEDEI 201 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 L V+D +P +L GG DGL YR++ + L + L + E+G Q V + Sbjct: 202 ASLSPVVKDHEPLRALAGGKDGLDFYRSLTRALPFVLRERALVAFEVGAGQGETVAAMLR 261 Query: 241 SR-KLFLVNAFKDYGGNDRVLLFC 263 V D G DR++ Sbjct: 262 KTFPHAKVEVVFDINGKDRMVYAT 285 >gi|289435804|ref|YP_003465676.1| modification methylase, HemK family [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289172048|emb|CBH28594.1| modification methylase, HemK family [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 283 Score = 255 bits (651), Expect = 6e-66, Method: Composition-based stats. Identities = 76/258 (29%), Positives = 114/258 (44%), Gaps = 10/258 (3%) Query: 7 SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66 + L GLS ++ ++ + L+ R L E + IL FY Sbjct: 25 AEILLETRMGLSRSELWMEINRELEPNHEKQFQADFERYLSGEPVQYILKTAPFYGYDFL 84 Query: 67 LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126 ++ D PRPETE LV A + ++K + +LD+ TG+G + +AL K P Sbjct: 85 VTEDVLIPRPETEELV----ACAEAFLKKNPLPTVLDVCTGSGIIAIALKKAFPKVLVTA 140 Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG---LFDVIVSNPPYIESVIVDCL 183 DIS AL IAK NA+ RF +++D S + FD++++NPPYI + Sbjct: 141 SDISSPALAIAKKNALLLNADVRF--VETDLLESFKQNGERFDMVLANPPYISEAEKAAM 198 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE-SR 242 V +P ++L DGL+ Y + + LN VEIGY Q V +F+ S Sbjct: 199 SDYVLKNEPALALFAENDGLAIYERFVEDLQYVLNPSFWVGVEIGYTQGEKVKDLFQKSY 258 Query: 243 KLFLVNAFKDYGGNDRVL 260 V KD DR + Sbjct: 259 PHSTVVIHKDINSKDRYV 276 >gi|298208448|ref|YP_003716627.1| putative protoporphyrinogen oxidase [Croceibacter atlanticus HTCC2559] gi|83848371|gb|EAP86240.1| putative protoporphyrinogen oxidase [Croceibacter atlanticus HTCC2559] Length = 282 Score = 255 bits (651), Expect = 6e-66, Method: Composition-based stats. Identities = 72/257 (28%), Positives = 113/257 (43%), Gaps = 7/257 (2%) Query: 9 SFLCRV-TGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67 L +S ++++PD+V+ T A R E I I+G +F+++ + Sbjct: 28 VLLSEAYLKMSRLDIVMNPDTVVSAAILANFTEAFKRLKVFEPIQYIIGETEFFDLNFKV 87 Query: 68 SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 + D PRPETE LV + + + + +LDL TG+G + ++L K + Sbjct: 88 TPDVLIPRPETEDLVRWIIQD-----QHKTNLDVLDLCTGSGCIAISLSKYLKDATVSAL 142 Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEV 187 DIS AL IAK NA N + F S+ +DVIVSNPPY+ ++ D + V Sbjct: 143 DISTSALAIAKENAENNNTNIHFLLKDILASDSLPQHYDVIVSNPPYVRNLEKDLMSNNV 202 Query: 188 RDFDPRISLDGGID-GLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246 + +P ++L D L Y I HL +G +EI + +S Sbjct: 203 LEHEPHLALFVEDDNPLIFYNKIISLSKTHLKPNGTLYLEINEFLGEATQALLDSDSFTN 262 Query: 247 VNAFKDYGGNDRVLLFC 263 + KD G DR+L Sbjct: 263 IELKKDIFGKDRMLKAT 279 >gi|328555407|gb|AEB25899.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Bacillus amyloliquefaciens TA208] gi|328913778|gb|AEB65374.1| glutamine methylase of release factor 1 [Bacillus amyloliquefaciens LL3] Length = 286 Score = 255 bits (651), Expect = 6e-66, Method: Composition-based stats. Identities = 77/266 (28%), Positives = 119/266 (44%), Gaps = 9/266 (3%) Query: 2 QALRD---SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWR 58 +A R+ + L TG+ +++ + + + + + + + I I+G Sbjct: 17 EAGREKNAAELLLLNDTGMDRSKLLANLQEPVGEDELYRFRRHVEMHKEGVPIQYIIGKE 76 Query: 59 DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118 FY ++ D PRPETE +V L + + + ++D+GTG+GA+ + L E Sbjct: 77 QFYGREFFVNDDVLIPRPETEEVVFHLLDKQKRVFSEGERLNVIDIGTGSGAIAVTLALE 136 Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYI 175 F DIS +AL++A+ NA G RF LQ D + D+IVSNPPYI Sbjct: 137 CGHFSVAASDISKEALQVAERNAQNLGADVRF--LQGDLLTPFISSGKKADIIVSNPPYI 194 Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235 + L VR +P +L G DGL Y+ + + + L EIGYNQ V Sbjct: 195 SEEEMADLSDIVRFHEPLHALTDGGDGLKFYKRFMEDLPLVMKDKALVVFEIGYNQGKAV 254 Query: 236 VRIFE-SRKLFLVNAFKDYGGNDRVL 260 +F S V KD G DR + Sbjct: 255 EDLFRHSFPNAEVEVVKDINGKDRTV 280 >gi|317121005|ref|YP_004101008.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Thermaerobacter marianensis DSM 12885] gi|315590985|gb|ADU50281.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Thermaerobacter marianensis DSM 12885] Length = 295 Score = 255 bits (651), Expect = 6e-66, Method: Composition-based stats. Identities = 76/264 (28%), Positives = 115/264 (43%), Gaps = 10/264 (3%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 +A + L L +V+ +PD L I+R + E + IL +FY Sbjct: 31 EARASARVLLGAALDLPGARVVAEPDLPLPPAAWARFVQWILRRARREPVAYILQQAEFY 90 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 ++ T PRPETE+LV+ L R + DLGTGTG V + L E P Sbjct: 91 GRPFRVTPATLIPRPETEVLVEVVL-----RTVPAGPAVVADLGTGTGIVAVTLAAERPA 145 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-----EGLFDVIVSNPPYIE 176 + + D S AL++A+ NA +GV R DW + G + SNPPY+ Sbjct: 146 WTVLASDCSAAALKVARENAARHGVDGRMRFYVGDWAEPLLAAGWAGKLAAVASNPPYVA 205 Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236 + + L E+ ++P ++L G GL YR + G R L G +E+G Q V Sbjct: 206 AADLPRLQAEIHRYEPHLALTPGATGLEAYRRLIPGAVRLLAPGGWIFLEVGAGQAPAVQ 265 Query: 237 RIFESRKLFLVNAFKDYGGNDRVL 260 + + V+ + D G RV+ Sbjct: 266 HLLGAVGCRCVSCWPDLAGIPRVV 289 >gi|332655313|ref|ZP_08421053.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Ruminococcaceae bacterium D16] gi|332515818|gb|EGJ45428.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Ruminococcaceae bacterium D16] Length = 287 Score = 255 bits (651), Expect = 6e-66, Method: Composition-based stats. Identities = 76/264 (28%), Positives = 119/264 (45%), Gaps = 7/264 (2%) Query: 1 MQA-LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRD 59 ++A ++ +C S Q D + + + R L E + I+G + Sbjct: 21 IEAGQLEARELICYAADKSREQFYRDMPLYVSGEMERRVEELVQRRLAGEPVAYIVGEWE 80 Query: 60 FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119 FY + L +S+D PR +TE+L + + + + R+LDL G+G V LA+ + Sbjct: 81 FYGLPLNISNDVLIPRIDTEVLAERGILRARA---AGEGARVLDLCAGSGCVGLAIAANA 137 Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIE 176 P + V ++S AL + K N N ++ R L + FDVIVSNPPYI Sbjct: 138 PDCRVVLGELSEGALRVCKQNVRRNELNARVTCLSVNAMEPPASSLWDFDVIVSNPPYIP 197 Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236 + ++ L V+D++P ++LDGG DGL YR IA + G E+G Q DV Sbjct: 198 TGDIEGLDHSVKDYEPHMALDGGADGLDFYRFIAAKWKNAIRLGGSLIFEVGIGQAPDVE 257 Query: 237 RIFESRKLFLVNAFKDYGGNDRVL 260 I + D G RV+ Sbjct: 258 NILAQNGFEQIQTTADTQGIWRVV 281 >gi|83720020|ref|YP_443438.1| hemK protein [Burkholderia thailandensis E264] gi|257137780|ref|ZP_05586042.1| hemK protein [Burkholderia thailandensis E264] gi|83653845|gb|ABC37908.1| hemK protein [Burkholderia thailandensis E264] Length = 285 Score = 255 bits (651), Expect = 7e-66, Method: Composition-based stats. Identities = 78/261 (29%), Positives = 121/261 (46%), Gaps = 11/261 (4%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L G S Q+I D LD R E + ++ G R+F+ + Sbjct: 24 DARILLAHALGWSRTQLITRADEPLDAAAIERYLALEARRAAGEPVAQLTGAREFFGLDF 83 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 ++ D PRPETELLV++AL I+ +LDLG G+GA+ +++ P + Sbjct: 84 DVTPDVLIPRPETELLVETALD----AIDGIASPCVLDLGAGSGAIAVSIASVRPDARVW 139 Query: 126 GVDISCKALEIAKSNAVTNGVSER----FDTLQSDWFSSVEG--LFDVIVSNPPYIESVI 179 +D S AL++A+ NA R L+SDW+++++ F V+VSNPPYI Sbjct: 140 ALDRSAAALDVARRNARKLLDPARAGGPLRFLESDWYAALDPGLRFHVVVSNPPYIARHD 199 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 ++R F+PR +L DGL+ RTI G + G +E GY+Q V + Sbjct: 200 PHLAEGDLR-FEPRGALTDEDDGLAAIRTIVAGAHAFVAPGGALWIEHGYDQAAAVRALL 258 Query: 240 ESRKLFLVNAFKDYGGNDRVL 260 E+ V + D +R Sbjct: 259 EAAGFADVESLADLASIERAT 279 >gi|307704778|ref|ZP_07641674.1| protein-glutamine-N5 methyltransferase [Streptococcus mitis SK597] gi|307621687|gb|EFO00728.1| protein-glutamine-N5 methyltransferase [Streptococcus mitis SK597] Length = 278 Score = 255 bits (651), Expect = 7e-66, Method: Composition-based stats. Identities = 79/247 (31%), Positives = 119/247 (48%), Gaps = 8/247 (3%) Query: 16 GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75 LS + + + + F+ + H+ I+G DFY ++L + PR Sbjct: 33 NLSFTDFVFALQQEVTEEEEVFVKEIFQQLAAHKPAQYIIGQADFYGMQLKVDERVLIPR 92 Query: 76 PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135 PETE LV+ LA + + +LD+GTG+GA+ LAL K P + DIS AL+ Sbjct: 93 PETEELVELILAEN-----PETNLSVLDIGTGSGAIALALAKNRPDWSVKAADISQDALD 147 Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195 +A NA + + +SD F+ + +D+IVSNPPYI +GL V +P ++ Sbjct: 148 VASENAKNQNL--QIFLKKSDCFTEISEKYDIIVSNPPYISREDESEVGLNVLHSEPHLA 205 Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDYG 254 L DGL+ YR IA+ +L G +EIGY Q V +F V KD Sbjct: 206 LFAAEDGLAIYRRIAEDAKDYLKDGGKIYLEIGYKQGQSVPELFRKHLPEKRVRTLKDQF 265 Query: 255 GNDRVLL 261 G DR+++ Sbjct: 266 GQDRMVV 272 >gi|238023220|ref|ZP_04603646.1| hypothetical protein GCWU000324_03147 [Kingella oralis ATCC 51147] gi|237865603|gb|EEP66743.1| hypothetical protein GCWU000324_03147 [Kingella oralis ATCC 51147] Length = 275 Score = 255 bits (651), Expect = 7e-66, Method: Composition-based stats. Identities = 77/267 (28%), Positives = 118/267 (44%), Gaps = 15/267 (5%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 ++ L +TG ++ Q+I L Q L I R E I ++G R+FY Sbjct: 14 PRNETRLLLQHITGYTASQLITRDREPLPKDQADQLHRLIARRSAGEPIAYLIGTREFYG 73 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 +S PRPETE L+++AL + + DLGTG+G + ++ E P Sbjct: 74 RAFVVSPAVLIPRPETEHLLEAALQRL------PENGVLWDLGTGSGIIAVSAKCERPDA 127 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS------VEGLFDVIVSNPPYIE 176 + DIS +AL +A+ NA Q WF++ + +I SNPPYIE Sbjct: 128 RVFASDISAEALAVAQQNAAA--WCAPVSFAQGAWFAANQVFRLPQHSVHIIASNPPYIE 185 Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236 + ++R ++P +L DGL+H R IA +L + G +E GY+Q V Sbjct: 186 ADDPHLQQGDLR-YEPPAALTDFADGLAHIRHIAQHAPAYLRRHGWLLLEHGYDQGQAVR 244 Query: 237 RIFESRKLFLVNAFKDYGGNDRVLLFC 263 I + +D+ G DRV L Sbjct: 245 DILARFGFCQIETQQDWAGLDRVTLGR 271 >gi|77460968|ref|YP_350475.1| modification methylase HemK [Pseudomonas fluorescens Pf0-1] gi|77384971|gb|ABA76484.1| [protein release factor]-glutamine N5-methyltransferase [Pseudomonas fluorescens Pf0-1] Length = 276 Score = 255 bits (651), Expect = 7e-66, Method: Composition-based stats. Identities = 76/249 (30%), Positives = 119/249 (47%), Gaps = 8/249 (3%) Query: 16 GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75 G S + P+ ++ + R E + ILG + F+ + L ++ T PR Sbjct: 32 GKSRSFLHTWPERIVPSEAALVFAEYLQRRRGGEPVAYILGQQGFWKLDLEVAPHTLIPR 91 Query: 76 PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135 P+T L + + ++LDLGTG+GA+ LAL E P +K VD +A+ Sbjct: 92 PDT-----ELLVEAALELLPATPAKVLDLGTGSGAIALALASERPAWKVTAVDRVLEAVA 146 Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194 +A+ N + L S WFS++EG F++I+SNPPYI + + +VR F+P Sbjct: 147 LAERNRQRLHL-NNATVLSSHWFSALEGKRFELIISNPPYIRAADPHLMEGDVR-FEPES 204 Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYG 254 +L GIDGL R I HL G +E GY+Q V + ++ V++ D G Sbjct: 205 ALVAGIDGLDDLRLIIAQAPAHLEAGGWLMLEHGYDQAEAVRDLLLTQGFDEVHSRTDLG 264 Query: 255 GNDRVLLFC 263 G+ R+ L Sbjct: 265 GHQRISLGR 273 >gi|114766146|ref|ZP_01445150.1| modification methylase, HemK family protein [Pelagibaca bermudensis HTCC2601] gi|114541606|gb|EAU44648.1| modification methylase, HemK family protein [Roseovarius sp. HTCC2601] Length = 282 Score = 255 bits (651), Expect = 7e-66, Method: Composition-based stats. Identities = 88/260 (33%), Positives = 123/260 (47%), Gaps = 12/260 (4%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 RD+ L V + ++ + ++ I H + I G R FY Sbjct: 21 DPGRDARRLLAHVLKVPPGRLTLFLPDPVESEHALLFNAVIESRAAHVPVSHITGRRQFY 80 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 ++ + +PRPETE+L+++ALA R+LDLGTG+G + L LL E Sbjct: 81 GREFLVTPEVLDPRPETEILIEAALA--------GPFSRVLDLGTGSGCILLTLLCEREG 132 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV----EGLFDVIVSNPPYIES 177 G+G D+S +ALE+A N + R + WF ++ FD+IVSNPPYI Sbjct: 133 ATGIGTDLSEEALEVAFWNRNALRLEARAALARGSWFGALGEDDRERFDLIVSNPPYIAL 192 Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237 +D L EVRD +PR++L DGL+ YR IA G HL G VEIG +Q V Sbjct: 193 DEMDDLSPEVRDHEPRMALTDEGDGLTAYRMIAAGAPSHLLPGGRLMVEIGPSQGAAVAD 252 Query: 238 IFESRKLFLVNAFKDYGGND 257 +F S L V D G D Sbjct: 253 LFRSAGLQEVAVITDLDGRD 272 >gi|332526536|ref|ZP_08402648.1| hemK protein [Rubrivivax benzoatilyticus JA2] gi|332110804|gb|EGJ10981.1| hemK protein [Rubrivivax benzoatilyticus JA2] Length = 269 Score = 254 bits (650), Expect = 8e-66, Method: Composition-based stats. Identities = 74/262 (28%), Positives = 112/262 (42%), Gaps = 10/262 (3%) Query: 4 LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63 D+ L G S ++ + +L T + R ++G R+F+ + Sbjct: 17 RLDTQLLLAHRLGRSRAWLLAHDEDLLSAATATAFTADLARRAAGVPFAYLVGEREFHGL 76 Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 L ++ D PRP+TE+LVD AL + R+ DLGTG+GA+ LA+ P Sbjct: 77 TLRVTPDVLVPRPDTEVLVDWALEL----LPPGAPARVADLGTGSGAIALAVKNARPQAS 132 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDC 182 D S +AL +A NA G+ + + +W+S + G FD+++SNPPYI Sbjct: 133 LTATDRSAEALAVAADNAGRLGLE--IEFVHGEWWSPLAGRRFDLVLSNPPYIAGADPHL 190 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 +PR +L DGL R I HL G +E GY+Q V + Sbjct: 191 T---ALQHEPRGALTPEGDGLDALRAIVSAAQAHLEPGGWLLLEHGYDQADAVQALLAGA 247 Query: 243 KLFLVNAFKDYGGNDRVLLFCR 264 V+ +D GG R R Sbjct: 248 GFTQVSTRRDLGGQPRCTGGRR 269 >gi|257870910|ref|ZP_05650563.1| modification methylase HemK [Enterococcus gallinarum EG2] gi|257805074|gb|EEV33896.1| modification methylase HemK [Enterococcus gallinarum EG2] Length = 278 Score = 254 bits (650), Expect = 8e-66, Method: Composition-based stats. Identities = 86/254 (33%), Positives = 128/254 (50%), Gaps = 9/254 (3%) Query: 9 SFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLS 68 FL R ++ D + + + + + L H +LG+ +FY R ++ Sbjct: 29 LFLAR-KNWQKLDWLLHMDQQISPADKVQIEADLQQLLAHRPPQYLLGYEEFYGHRFKVT 87 Query: 69 SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128 DT PRPETE LV A L + E + +R++D+GTGTGA+ ++L P ++ VD Sbjct: 88 EDTLIPRPETEELV----ALCLEQTEPAENLRVVDIGTGTGAIAVSLKLARPHWQIAAVD 143 Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEV 187 +S AL +AK NA G Q D + V + +D+IVSNPPYI + + V Sbjct: 144 LSEAALAVAKENAAQLGAE--VAFYQGDTLTPVGDQSWDIIVSNPPYISEQEWELMDASV 201 Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF-ESRKLFL 246 R F+P+++L +GL YR IAD + L DG VEIG+ Q V RIF E+ Sbjct: 202 RQFEPQMALFAAENGLVMYRKIADQAKKLLTPDGKIFVEIGFQQGKSVQRIFAEAFPDKK 261 Query: 247 VNAFKDYGGNDRVL 260 V +D G DR++ Sbjct: 262 VTVIQDLSGKDRLV 275 >gi|212695384|ref|ZP_03303512.1| hypothetical protein BACDOR_04933 [Bacteroides dorei DSM 17855] gi|212662019|gb|EEB22593.1| hypothetical protein BACDOR_04933 [Bacteroides dorei DSM 17855] Length = 278 Score = 254 bits (650), Expect = 8e-66, Method: Composition-based stats. Identities = 77/259 (29%), Positives = 118/259 (45%), Gaps = 6/259 (2%) Query: 7 SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66 + L +V G+S ++ D+ ++ L + +VR K E I I+G +FY + Sbjct: 25 AKLLLTQVFGMSVVELYAGKDTTFSVNEQKRLDDILVRLQKLEPIQYIIGTEEFYGLTFE 84 Query: 67 LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126 ++ PRPET LVD + R K V+ILD+GTG+G + ++L K + V Sbjct: 85 VNKHVLIPRPETGELVDWII-----REHKYGRVKILDIGTGSGCIAVSLTKNLEEAEVVS 139 Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLE 186 D+S KAL++A+ N NGV + S FDVIVSNPPYI + Sbjct: 140 WDVSEKALQVAERNCRRNGVRVTLEQRDVLLASPAGEQFDVIVSNPPYITEKEKANMSAN 199 Query: 187 VRDFDPRISLDGGID-GLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245 V +++P ++L D L YR IA+ L G EI + V + Sbjct: 200 VLEWEPELALFVPDDSPLLFYRKIAELGRDMLVSGGRLYFEINQEYGRETVDMLAGLGYK 259 Query: 246 LVNAFKDYGGNDRVLLFCR 264 + KD NDR++ + Sbjct: 260 NIELRKDLFQNDRMIKAKK 278 >gi|126653460|ref|ZP_01725556.1| modification methylase, HemK family protein [Bacillus sp. B14905] gi|126589816|gb|EAZ83949.1| modification methylase, HemK family protein [Bacillus sp. B14905] Length = 286 Score = 254 bits (650), Expect = 8e-66, Method: Composition-based stats. Identities = 67/257 (26%), Positives = 116/257 (45%), Gaps = 5/257 (1%) Query: 7 SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66 + + + G S +V++ L + Q+ I + + +G +FY Sbjct: 28 ARIVMQHILGTSYSEVMLHLQDKLTEEQQVKFKALIEEHVNGRPVQYCVGSEEFYGRSFI 87 Query: 67 LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126 + PRPETE L+ + ++ + +++ D+GTG+GA+ +++ E P V Sbjct: 88 VDESVLIPRPETEELI-LGTINRMTKLFQHQALKVADIGTGSGAIAISMKLECPALTVVA 146 Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGL 185 D+S AL A+ NA D D + + G FD+I+SNPPYI + + Sbjct: 147 TDLSEDALATAQKNAQRLEAD--IDFRLGDLTAPLAGEKFDIILSNPPYIAFDEAEAMSD 204 Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KL 244 V +P +L DGL YR +A+ + ++NK L +EIGY Q V + F+ Sbjct: 205 VVLKHEPHSALFAEEDGLILYRQLAEQLPMYMNKPALIGLEIGYTQGEKVAKFFQDSFPQ 264 Query: 245 FLVNAFKDYGGNDRVLL 261 ++ KD G R++ Sbjct: 265 ATISIEKDINGKPRMIF 281 >gi|225156035|ref|ZP_03724518.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Opitutaceae bacterium TAV2] gi|224803268|gb|EEG21508.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Opitutaceae bacterium TAV2] Length = 338 Score = 254 bits (650), Expect = 8e-66, Method: Composition-based stats. Identities = 82/316 (25%), Positives = 119/316 (37%), Gaps = 54/316 (17%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 D+ + GL Q+ + + L + + + + R E + ILG ++ Sbjct: 23 PRLDAEWLVGHALGLKRMQLYMQFERPLKESELDLIRPLVRRRGAREPLQHILGTVEWCG 82 Query: 63 VRLTLSSDTFEPRPETELLVDSALA--------------------FSLPRIEKRDVVRIL 102 + L PRPETE LV+ +A S P RIL Sbjct: 83 LTLKTDRRALIPRPETEYLVELIIAKLHPSRASISSTASDVGRSAQSAPPPSVAAPSRIL 142 Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162 DLGTGTGA+ LAL P +D S AL +A+ NA + R ++S+WFS++ Sbjct: 143 DLGTGTGAIALALATHFPKAAVTALDASDDALALARENAAALALDARVTFVKSNWFSALP 202 Query: 163 ----------------------------------GLFDVIVSNPPYIESVIVDCLGLEVR 188 LFD+IVSNPPY+ EVR Sbjct: 203 PPPPPAATDTDISSTALDVGRSTLDVGRSAQSAAPLFDLIVSNPPYLTDAEAAAAEPEVR 262 Query: 189 DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN 248 DPR +L DGL+ RT+ D L GL ++E G Q + + + Sbjct: 263 LHDPRSALVAPDDGLADLRTLIDQARARLVPGGLLALETGPTQHPALRALATACGYARHE 322 Query: 249 AFKDYGGNDRVLLFCR 264 + D G +R R Sbjct: 323 SAPDLAGRERFFFAWR 338 >gi|254373463|ref|ZP_04988951.1| hypothetical protein FTCG_01058 [Francisella tularensis subsp. novicida GA99-3549] gi|151571189|gb|EDN36843.1| hypothetical protein FTCG_01058 [Francisella novicida GA99-3549] Length = 284 Score = 254 bits (650), Expect = 8e-66, Method: Composition-based stats. Identities = 83/258 (32%), Positives = 130/258 (50%), Gaps = 6/258 (2%) Query: 4 LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63 D +C V G+ + ++ D LD + I+R L E + ILG++ F+N Sbjct: 25 KHDLQMIICDVLGVDKAYLYINSDKQLDKNTLKKIDEKILRLLAGEPLAYILGYKYFWNQ 84 Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 +L ++ DT PR +TE +V + L K ++ILDLGTGTGA+ LAL E + Sbjct: 85 KLYVTKDTLIPRADTETVVATVLDDIQ---NKDAQLKILDLGTGTGAIALALAAELANSQ 141 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDC 182 V VD+ ++L++AK NA N ++ +QS W+++++ FD+IVSNPPYI+ Sbjct: 142 VVAVDLYQQSLDVAKKNAQANNIT-NVKFIQSSWYTNLDTDKFDIIVSNPPYIDLADT-N 199 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 + V+D++P +L +GL+ R I LN G +E G+ Q V +F Sbjct: 200 IDQSVKDYEPARALFAADNGLADIRIIISQAKDFLNLGGFIYIEHGFTQADAVTALFSQY 259 Query: 243 KLFLVNAFKDYGGNDRVL 260 + KD NDR Sbjct: 260 NFTHIKTVKDLNNNDRCT 277 >gi|261420782|ref|YP_003254464.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Geobacillus sp. Y412MC61] gi|319768452|ref|YP_004133953.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Geobacillus sp. Y412MC52] gi|261377239|gb|ACX79982.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Geobacillus sp. Y412MC61] gi|317113318|gb|ADU95810.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Geobacillus sp. Y412MC52] Length = 293 Score = 254 bits (650), Expect = 9e-66, Method: Composition-based stats. Identities = 73/265 (27%), Positives = 109/265 (41%), Gaps = 7/265 (2%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSL-KHESIHRILGWRDFYNV 63 R + LC G+ + +D+ + R H I ++G+ FY Sbjct: 24 RAAEWLLCHHLGVDRAGLFARWREPVDEAVYERFAADVRRHAVDHVPIQYLIGYESFYGR 83 Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 ++ PRPETE LV L R + ++D+GTG+GA+ + L E+ Sbjct: 84 PFLVNRHVLIPRPETEELVLGVLKRVPRLFAGRKRIDVVDVGTGSGAIAVTLALENKALS 143 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVIV 180 DIS AL +A+ NA G L D + DV+VSNPPYI Sbjct: 144 VTATDISEAALAVARENARRLGA--NVSFLCGDLLQPIMAMGWTVDVVVSNPPYIPETDA 201 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 L V++++P +L GG DGL YR A + L L + E+G Q V + + Sbjct: 202 AMLSPVVKNYEPHTALFGGRDGLDFYRRFARELPLVLGAPALAAFEVGAGQGEAVAALLD 261 Query: 241 SR-KLFLVNAFKDYGGNDRVLLFCR 264 + V D G DR++ R Sbjct: 262 AAFPEAEVEVDFDLNGKDRMVYMTR 286 >gi|193213221|ref|YP_001999174.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Chlorobaculum parvum NCIB 8327] gi|193086698|gb|ACF11974.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Chlorobaculum parvum NCIB 8327] Length = 294 Score = 254 bits (650), Expect = 9e-66, Method: Composition-based stats. Identities = 71/248 (28%), Positives = 115/248 (46%), Gaps = 8/248 (3%) Query: 19 SHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPET 78 Q+ +D + + + A L+ + I G FY R + PRPET Sbjct: 44 RLQLYLDHERPVTPSELGAFRAACRERLQGRPVQYIAGESFFYGYRFFVDERVLIPRPET 103 Query: 79 ELLVDSALAF-SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137 EL+++ A+ + ++ D ILD+GTG+G + + L P + +D+S ALE+A Sbjct: 104 ELVLEHAIERLAASGLDSVDTPSILDIGTGSGCIAITLALRLPGAQVTALDVSADALEVA 163 Query: 138 KSNAVTNGVSERFDTLQSDWFS-----SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDP 192 + NA +GVS+R +Q+D G FD+++SNPPYI L EV+ ++P Sbjct: 164 RRNAEEHGVSDRIRFVQADALDLAFAQKAGGPFDLVISNPPYIPESEWATLQKEVKGYEP 223 Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKD 252 R++L G YR+I L K G+ E+ + V ++ + V +D Sbjct: 224 RLALVS-PTGFEFYRSIVATAPALLRKGGVLCFELHADGAEGVKKLL-GHEFRDVQVMQD 281 Query: 253 YGGNDRVL 260 Y DR L Sbjct: 282 YSRLDRAL 289 >gi|329956197|ref|ZP_08296877.1| protein-(glutamine-N5) methyltransferase [Bacteroides clarus YIT 12056] gi|328524671|gb|EGF51732.1| protein-(glutamine-N5) methyltransferase [Bacteroides clarus YIT 12056] Length = 282 Score = 254 bits (650), Expect = 9e-66, Method: Composition-based stats. Identities = 76/267 (28%), Positives = 114/267 (42%), Gaps = 12/267 (4%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 +A S C + G ++ + D +L ++ L + R E I I G F Sbjct: 24 EAANLSRIVCCEILGQTAVDYYLGKDIILSPKEMQDLDGILARLHNFEPIQYIQGTARFL 83 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 ++ PRPETE LV++ L R+LD+GTG+G + ++L K P Sbjct: 84 ERSYHVAPGVLIPRPETEELVETMLKEIASD------ARVLDIGTGSGCIAVSLSKAFPD 137 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG---LFDVIVSNPPYIESV 178 K DIS +AL IA+ N G + RF L+ + + G +DVIVSNPPY+ Sbjct: 138 AKVTAWDISDEALNIARRNNDMLGGNVRF--LRQNVLTYTPGDSECYDVIVSNPPYVTES 195 Query: 179 IVDCLGLEVRDFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237 + V D++P +L D L YR IA+ L G EI Sbjct: 196 EKQTMERNVLDWEPFSALFVPDNDPLLFYRRIAELGKTMLAPGGRLYFEINRAYGEATAT 255 Query: 238 IFESRKLFLVNAFKDYGGNDRVLLFCR 264 + + + KD GNDR+++ R Sbjct: 256 MLCEQGYTNLQVLKDISGNDRIVIAER 282 >gi|171057270|ref|YP_001789619.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Leptothrix cholodnii SP-6] gi|170774715|gb|ACB32854.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Leptothrix cholodnii SP-6] Length = 280 Score = 254 bits (650), Expect = 9e-66, Method: Composition-based stats. Identities = 80/258 (31%), Positives = 119/258 (46%), Gaps = 9/258 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A D+ L V GLS ++ + D VL Q + R L E + + G +F+ Sbjct: 21 ARLDAQLLLGHVCGLSRTGLLTNDDQVLPAAQLARWQQLLARRLAGEPVAYLTGRHEFHG 80 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L ++SD +PRP+TE LVD L R+LDLGTG+GA+ LA+ P Sbjct: 81 LTLHITSDVLDPRPDTETLVDWGLELL---ARLGRPARVLDLGTGSGAIALAIKHRCPSA 137 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181 + VD S AL +A++N + D +WF ++ G FD+I+SNPPYI Sbjct: 138 QVSAVDFSAAALAVARANGARLNLD--VDWQPGNWFENLAGQRFDLILSNPPYIAEDDPH 195 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +PR +L G DGL R++ +HL G +E G++Q V V + S Sbjct: 196 MP---ALRHEPRQALVSGADGLDDIRSLVRQAPQHLVAGGWLLLEHGHDQGVAVQDLLRS 252 Query: 242 RKLFLVNAFKDYGGNDRV 259 V+ D + R Sbjct: 253 TGYREVDRRLDLADHVRC 270 >gi|77163924|ref|YP_342449.1| modification methylase HemK [Nitrosococcus oceani ATCC 19707] gi|254436166|ref|ZP_05049673.1| methyltransferase, HemK family [Nitrosococcus oceani AFC27] gi|76882238|gb|ABA56919.1| [protein release factor]-glutamine N5-methyltransferase [Nitrosococcus oceani ATCC 19707] gi|207089277|gb|EDZ66549.1| methyltransferase, HemK family [Nitrosococcus oceani AFC27] Length = 283 Score = 254 bits (650), Expect = 9e-66, Method: Composition-based stats. Identities = 77/258 (29%), Positives = 116/258 (44%), Gaps = 7/258 (2%) Query: 4 LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63 ++ L + + + D L Q + R K E + I GW++F+++ Sbjct: 25 RLEAERLLAYLLKVERSYLYAWSDRRLTPTQWVSFQRLLQRRAKGEPLAYIRGWQEFWSL 84 Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 L ++ T PRPETE +V+ AL R++ + + DLGTG+GA+ LA+ E P + Sbjct: 85 NLQVTEATLIPRPETEQVVELAL----QRLDLERALNVADLGTGSGAIALAMGSERPRAR 140 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDC 182 + D+S + LE+A+ N G+ DWF + G F +I SNPPYI Sbjct: 141 VIATDVSAETLEVARENGRRLGLC-NVTFRLGDWFVPLVGERFHLIASNPPYIAEGDPH- 198 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 L F+P I+L GL R IA HL G +E GY Q ++ +F Sbjct: 199 LTQNGLAFEPDIALIAKDKGLGAARHIAMTAREHLLDGGWLLLEHGYEQGPSLLALFTQL 258 Query: 243 KLFLVNAFKDYGGNDRVL 260 V F D G RV+ Sbjct: 259 GYQQVADFCDLAGLPRVV 276 >gi|85059853|ref|YP_455555.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Sodalis glossinidius str. 'morsitans'] gi|84780373|dbj|BAE75150.1| putative protoporphyrinogen oxidase [Sodalis glossinidius str. 'morsitans'] Length = 282 Score = 254 bits (650), Expect = 9e-66, Method: Composition-based stats. Identities = 84/258 (32%), Positives = 132/258 (51%), Gaps = 8/258 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A D+ L + TG++ +++ ++ L D Q L + R + E + + G R+F++ Sbjct: 22 ARSDAEILLAQQTGVARTRLLAFGETPLTDAQHATLEALLARRERGEPVAYLTGEREFWS 81 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +S+DT PRP+TE LV AL P +LDLGTG+GA+ LAL E P + Sbjct: 82 LPLRVSADTLIPRPDTECLVQRALDLLSP-----GRAEVLDLGTGSGAIALALASERPEW 136 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVD 181 + G+D A+ +A++NA G+ + DWF ++ + +IVSNPPYI++ Sbjct: 137 RITGIDRLPGAVALARANAARLGLR-NVQFHEGDWFKPLQAQRYRLIVSNPPYIKADDPH 195 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 + +VR F+PR +L G DGL I G HL G +E G+ Q V + Sbjct: 196 LMQGDVR-FEPRSALVAGEDGLQDLAAICRGAGAHLEPGGWLVLEHGWCQGAAVRGLLAD 254 Query: 242 RKLFLVNAFKDYGGNDRV 259 + +DYG N+RV Sbjct: 255 TGFGQIATLRDYGDNERV 272 >gi|222153024|ref|YP_002562201.1| methyltransferase [Streptococcus uberis 0140J] gi|222113837|emb|CAR41935.1| putative methyltransferase [Streptococcus uberis 0140J] Length = 274 Score = 254 bits (650), Expect = 9e-66, Method: Composition-based stats. Identities = 82/265 (30%), Positives = 131/265 (49%), Gaps = 12/265 (4%) Query: 1 MQALRDSHSFLCRVT----GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILG 56 ++A+ + L V S+ I + + + L + + +H S I+G Sbjct: 14 LEAIGEDRENLVYVLRELKKWSTLDFIQYQNREVTPEDQELLKDIMAELSQHRSPQYIVG 73 Query: 57 WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116 F ++ L++ PRPETE LVD LA + +R+LD+GTG+GA+ ++L Sbjct: 74 QAYFRDLVLSVDERVLIPRPETEELVDLILAEN-----STQSLRLLDIGTGSGAIAISLK 128 Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE 176 KE P + DIS +AL +A NA G + ++SD F S+ G FD+IVSNPPYI Sbjct: 129 KERPDWDVFASDISPEALALANYNAEQLGC--QITFVESDIFRSITGSFDIIVSNPPYIA 186 Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236 + +G+ V +P ++L +G + YR I + +L ++G EIGY Q + Sbjct: 187 FEDKEEVGINVLKSEPHLALFAEENGYAIYRKIIEEAGFYLKENGKLYFEIGYKQGKVIR 246 Query: 237 RIFESR-KLFLVNAFKDYGGNDRVL 260 + ES V +DY G DR++ Sbjct: 247 EMLESSFPHKRVRLLQDYFGKDRMI 271 >gi|329766952|ref|ZP_08258480.1| protein-(glutamine-N5) methyltransferase [Gemella haemolysans M341] gi|328837677|gb|EGF87302.1| protein-(glutamine-N5) methyltransferase [Gemella haemolysans M341] Length = 280 Score = 254 bits (650), Expect = 9e-66, Method: Composition-based stats. Identities = 76/261 (29%), Positives = 131/261 (50%), Gaps = 8/261 (3%) Query: 7 SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRL 65 + L + +S Q + + + + I + ++ + + + G+ FY+ + Sbjct: 24 ARFLLMYMLDENSQQFTNNISEQISKEKEELYFSLIDKHIEENMPLSHLAGFEYFYDRKF 83 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE--SPFFK 123 ++ D PR ETE L+ + + ++ ++ILDL TG+G + + L KE S K Sbjct: 84 KVTKDVLSPRMETEELIYKVIEYIKSI--NKNNIKILDLCTGSGIIGITLRKELESKSLK 141 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183 V DIS +AL++AK NA+ N +QSD F ++ FD+IVSNPPYI + Sbjct: 142 VVASDISEEALKVAKENAIMNEAE--VKFIQSDIFENINEKFDIIVSNPPYIAYSDKITM 199 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 V ++DP ++L DG+ YR I + +LNKDG+ EIGY+Q+ ++++ + Sbjct: 200 EDNVLNYDPHLALFAEEDGMYFYREIVENSKEYLNKDGMIFFEIGYDQREKILKLANENE 259 Query: 244 LFLVNAFKDYGGNDRVLLFCR 264 +KD G DR+ + R Sbjct: 260 FK-AEVYKDINGRDRMAILER 279 >gi|149372324|ref|ZP_01891512.1| putative protoporphyrinogen oxidase [unidentified eubacterium SCB49] gi|149354714|gb|EDM43277.1| putative protoporphyrinogen oxidase [unidentified eubacterium SCB49] Length = 282 Score = 254 bits (649), Expect = 1e-65, Method: Composition-based stats. Identities = 79/257 (30%), Positives = 114/257 (44%), Gaps = 4/257 (1%) Query: 9 SFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLS 68 G + + V ++ AI R L HE I I+G FY + + Sbjct: 29 LLTEHYFGFNKFETHQKGADVFPVEHEQHISEAIQRLLLHEPIQYIIGETAFYGLPFKVD 88 Query: 69 SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128 T PRPETE LV+ L + D ILD+GTG+G + ++L KE + D Sbjct: 89 RHTLIPRPETEELVEWILVEA---ANNEDDKEILDIGTGSGCIAVSLAKEFDKAQVSAYD 145 Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVR 188 IS AL++A+ NA+TN V RF + +E FDVIVSNPPY+ + + V Sbjct: 146 ISEGALKVAQENALTNKVEVRFKNVDILALDELEQSFDVIVSNPPYVRDLEKKMMQANVL 205 Query: 189 DFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLV 247 + +P +L D L YR IA + L K+GL EI ++ + + Sbjct: 206 EHEPATALFVSDTDPLIFYRKIAALAFKSLKKNGLLYFEINEYLGEEMKVLMKEMGFNNC 265 Query: 248 NAFKDYGGNDRVLLFCR 264 KD G DR++ R Sbjct: 266 IIKKDIYGKDRMMRAER 282 >gi|119505821|ref|ZP_01627887.1| protoporphyrinogen oxidase [marine gamma proteobacterium HTCC2080] gi|119458319|gb|EAW39428.1| protoporphyrinogen oxidase [marine gamma proteobacterium HTCC2080] Length = 271 Score = 254 bits (649), Expect = 1e-65, Method: Composition-based stats. Identities = 73/259 (28%), Positives = 120/259 (46%), Gaps = 8/259 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 ++S L + + D + + + + R E + ILG +F++ Sbjct: 14 PQKESELLLFQTFECDRSWLYAHGDEPVTESRVAHFLGLVERRQAGEPLAYILGQWEFWS 73 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L ++ D PR +TELLV A+A + ++ R LDLGTG+GAV LA+ E P Sbjct: 74 LPLKVTPDVLIPRMDTELLVQWAVAL----LPEQSKQRCLDLGTGSGAVALAVKHEFPTS 129 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181 + VD+S AL +A++N + + L+ WF V FD++V+NPPYI Sbjct: 130 EVTAVDLSQPALNVARTNGQQLQLE--VEWLEGSWFEPVAAREFDLVVANPPYIREDDDH 187 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 ++ +P+++L GIDGL R + L G +E G++Q DV + + Sbjct: 188 LHQGDLPA-EPKMALTSGIDGLHALRQLVADGQSALGPGGWMLLEHGWDQGPDVRDLLVT 246 Query: 242 RKLFLVNAFKDYGGNDRVL 260 V +D G +RV Sbjct: 247 HGWQAVETRRDLAGRERVT 265 >gi|254485503|ref|ZP_05098708.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Roseobacter sp. GAI101] gi|214042372|gb|EEB83010.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Roseobacter sp. GAI101] Length = 271 Score = 254 bits (649), Expect = 1e-65, Method: Composition-based stats. Identities = 88/259 (33%), Positives = 130/259 (50%), Gaps = 8/259 (3%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 RD+ L + + +V + + I + ++G R FY Sbjct: 15 DPARDARILLAHAASVDASRVTLIAPEEIAPEIAERFETLIALRAVRVPVSHLVGQRAFY 74 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 +S D +PRPETE L++ AL+ + ++DLGTG+G + + LL E P Sbjct: 75 GRDFKISRDVLDPRPETETLIELALSEAFDT--------VMDLGTGSGCILVTLLAERPE 126 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181 +G+G+D+S A A +NAV +GV+ R D QSDWF++ EG FD+IV+NPPY+ + Sbjct: 127 ARGLGLDLSEAACLQASANAVLHGVAARADIRQSDWFAAAEGRFDLIVANPPYLAKSEMA 186 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 + E+R +P ++L G+DGLS YR IA +L G EIG+ Q DV +IF Sbjct: 187 GVAPELRLHEPEMALTDGLDGLSAYRVIASQAQGYLTATGRVLAEIGWQQGPDVAQIFRD 246 Query: 242 RKLFLVNAFKDYGGNDRVL 260 V D G DRVL Sbjct: 247 AGWGRVRILPDLDGRDRVL 265 >gi|285017272|ref|YP_003374983.1| methyltransferase hemk protein [Xanthomonas albilineans GPE PC73] gi|283472490|emb|CBA14995.1| probable methyltransferase hemk protein [Xanthomonas albilineans] Length = 277 Score = 254 bits (649), Expect = 1e-65, Method: Composition-based stats. Identities = 75/262 (28%), Positives = 118/262 (45%), Gaps = 7/262 (2%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A D+ L + L + R + E + + G R F+ Sbjct: 18 ARGDAEVLLIHALQRDRAWLFAHAREPLSAETVAVFRGLVARRAQGEPVAYLTGRRGFWT 77 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L + T PR +TE LV+ AL R++ + R+ DLGTG+GA+ LAL E P Sbjct: 78 LDLAVGPATLIPRADTERLVELALE----RLDMQPGRRVADLGTGSGAIALALASERPRA 133 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181 + + D+S AL +A++N + +G+ W + G FD+I SNPPYI + Sbjct: 134 QVLATDLSAAALAVAEANMLAHGL-HNVAFAHGAWLVPLAGQRFDLIASNPPYIAAGDPH 192 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 ++R ++P +L G+DGL R I G HL G +E G++Q V + + Sbjct: 193 LTQGDLR-YEPLSALTSGVDGLDDIRQIVAGAPAHLRAGGWLLLEHGWDQGNAVRALLTA 251 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 + V ++D DRV L C Sbjct: 252 ARFIAVETYQDLELRDRVTLGC 273 >gi|329904247|ref|ZP_08273722.1| methylase of polypeptide chain release factor [Oxalobacteraceae bacterium IMCC9480] gi|327548071|gb|EGF32800.1| methylase of polypeptide chain release factor [Oxalobacteraceae bacterium IMCC9480] Length = 278 Score = 254 bits (649), Expect = 1e-65, Method: Composition-based stats. Identities = 79/258 (30%), Positives = 126/258 (48%), Gaps = 10/258 (3%) Query: 8 HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67 L GL+ ++I + +L Q ++ R + E I ++G R+FY +R + Sbjct: 25 RILLGHALGLTRIELITGNEQMLTPAQAQRVSALFERRIAGEPIAYLVGTREFYGLRFEV 84 Query: 68 SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 + PRPETELLV+ A+ R+LD+GTG+GA+ +AL + Sbjct: 85 TPAVLIPRPETELLVELAIDRL------PRQGRVLDMGTGSGAIAVALANSRRDAAVSAI 138 Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLE 186 D S AL +A+ NA + + + +SDW++++EG FD+IV+NPPYI + Sbjct: 139 DFSDAALAVARRNAAHH--AVQVHLQRSDWYAALEGQCFDMIVANPPYIVEGDHHLSEGD 196 Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246 +R F+P +L DGLS R I G + L G +E GY+Q V + ++ + Sbjct: 197 LR-FEPVDALTDHADGLSALRQIVSGATAALAPAGWLLMEHGYDQAAAVCALLDAAQFTD 255 Query: 247 VNAFKDYGGNDRVLLFCR 264 V ++ D G RV R Sbjct: 256 VQSWPDLAGIARVSGGRR 273 >gi|29349137|ref|NP_812640.1| putative protoporphyrinogen oxidase [Bacteroides thetaiotaomicron VPI-5482] gi|253571300|ref|ZP_04848707.1| conserved hypothetical protein [Bacteroides sp. 1_1_6] gi|29341045|gb|AAO78834.1| putative protoporphyrinogen oxidase [Bacteroides thetaiotaomicron VPI-5482] gi|251839253|gb|EES67337.1| conserved hypothetical protein [Bacteroides sp. 1_1_6] Length = 278 Score = 254 bits (649), Expect = 1e-65, Method: Composition-based stats. Identities = 80/260 (30%), Positives = 122/260 (46%), Gaps = 12/260 (4%) Query: 9 SFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLS 68 C + G+ + + + D +L ++ L N I R K+E I I G+ +F ++ Sbjct: 27 LICCDMLGVDALDIYMGKDIILSACKQRELENIIFRLQKNEPIQYIRGYAEFCGRNFRVA 86 Query: 69 SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128 PRPET LVD + E D R+LD+GTG+G + ++L K P K D Sbjct: 87 PGVLIPRPETAELVDLIVK------ENPDARRLLDIGTGSGCIAISLDKNLPDAKVDAWD 140 Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSS--VEGL-FDVIVSNPPYIESVIVDCLGL 185 IS +AL IA+ N + + + D FS+ ++G +D+IVSNPPY+ + Sbjct: 141 ISEEALAIARKNNEE--LDAQVTFRRQDVFSADGIQGTSYDIIVSNPPYVTETEKTEMEA 198 Query: 186 EVRDFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 V D++P ++L D L YR IA+ L G EI D++R+ E + Sbjct: 199 NVLDWEPELALFVPDEDPLRFYRRIAELGRELLRPGGKLYFEINQAYGQDMIRMIEMNQY 258 Query: 245 FLVNAFKDYGGNDRVLLFCR 264 V KD G DR+L R Sbjct: 259 RDVRVIKDIFGKDRILTANR 278 >gi|118498112|ref|YP_899162.1| HemK family modification methylase [Francisella tularensis subsp. novicida U112] gi|194323338|ref|ZP_03057122.1| methyltransferase, HemK family [Francisella tularensis subsp. novicida FTE] gi|118424018|gb|ABK90408.1| modification methylase, HemK family [Francisella novicida U112] gi|194322702|gb|EDX20182.1| methyltransferase, HemK family [Francisella tularensis subsp. novicida FTE] Length = 284 Score = 254 bits (649), Expect = 1e-65, Method: Composition-based stats. Identities = 82/258 (31%), Positives = 130/258 (50%), Gaps = 6/258 (2%) Query: 4 LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63 D +C V G+ + ++ D LD + I+R L E + ILG++ F+N Sbjct: 25 KHDLQMIICDVLGVDKTYLYINSDKQLDKNTLKKIDEKILRLLAGEPLAYILGYKYFWNQ 84 Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 +L ++ DT PR +TE +V + L K ++ILDLGTGTGA+ LAL E + Sbjct: 85 KLYVTKDTLIPRADTETVVATVLDDIQ---NKDAQLKILDLGTGTGAIALALAAELANSQ 141 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDC 182 V VD+ ++L++AK NA N ++ +QS W+++++ FD+IVSNPPYI+ Sbjct: 142 VVAVDLYQQSLDVAKKNAQANNIT-NVKFIQSSWYTNLDTDKFDIIVSNPPYIDLADT-N 199 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 + V+D++P +L +GL+ R I LN G +E G+ Q + +F Sbjct: 200 IDQSVKDYEPARALFAADNGLADIRIIISQAKDFLNLGGFIYIEHGFTQADAITALFSQY 259 Query: 243 KLFLVNAFKDYGGNDRVL 260 + KD NDR Sbjct: 260 NFTDIKTVKDLNNNDRCT 277 >gi|265753007|ref|ZP_06088576.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacteroides sp. 3_1_33FAA] gi|263236193|gb|EEZ21688.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacteroides sp. 3_1_33FAA] Length = 278 Score = 254 bits (649), Expect = 1e-65, Method: Composition-based stats. Identities = 77/259 (29%), Positives = 118/259 (45%), Gaps = 6/259 (2%) Query: 7 SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66 + L +V G+S ++ D+ ++ L + +VR K E I I+G +FY + Sbjct: 25 AKLLLTQVFGMSVVELYAGKDTTFSVNEQKRLDDILVRLQKLEPIQYIIGTEEFYGLTFE 84 Query: 67 LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126 ++ PRPET LVD + R K V+ILD+GTG+G + ++L K + V Sbjct: 85 VNKHVLIPRPETGELVDWII-----REHKYGWVKILDIGTGSGCIAVSLTKNLEEAEVVS 139 Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLE 186 D+S KAL++A+ N NGV + S FDVIVSNPPYI + Sbjct: 140 WDVSEKALQVAERNCRRNGVRVTLEQRDVLLASPAGEQFDVIVSNPPYITEKEKANMSAN 199 Query: 187 VRDFDPRISLDGGID-GLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245 V +++P ++L D L YR IA+ L G EI + V + Sbjct: 200 VLEWEPELALFVPDDSPLLFYRKIAELGRDMLVSGGRLYFEINQEYGRETVDMLAGLGYK 259 Query: 246 LVNAFKDYGGNDRVLLFCR 264 + KD NDR++ + Sbjct: 260 NIELRKDLFQNDRMIKAEK 278 >gi|237711579|ref|ZP_04542060.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] gi|237725968|ref|ZP_04556449.1| conserved hypothetical protein [Bacteroides sp. D4] gi|229435776|gb|EEO45853.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4] gi|229454274|gb|EEO59995.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] Length = 278 Score = 254 bits (649), Expect = 1e-65, Method: Composition-based stats. Identities = 77/259 (29%), Positives = 118/259 (45%), Gaps = 6/259 (2%) Query: 7 SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66 + L +V G+S ++ D+ ++ L + +VR K E I I+G +FY + Sbjct: 25 AKLLLTQVFGMSVVELYAGKDTTFSVNEQKRLDDILVRLQKLEPIQYIIGTEEFYGLTFE 84 Query: 67 LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126 ++ PRPET LVD + R K V+ILD+GTG+G + ++L K + V Sbjct: 85 VNKHVLIPRPETGELVDWII-----REHKYGRVKILDIGTGSGCIAVSLTKNLEEAEVVS 139 Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLE 186 D+S KAL++A+ N NGV + S FDVIVSNPPYI + Sbjct: 140 WDVSEKALQVAERNCRRNGVRVTLEQRDVLLASPAGEQFDVIVSNPPYITEKEKANMSAN 199 Query: 187 VRDFDPRISLDGGID-GLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245 V +++P ++L D L YR IA+ L G EI + V + Sbjct: 200 VLEWEPELALFVPDDSPLLFYRKIAELGRDMLVSGGRLYFEINQEYGRETVDMLAGLGYK 259 Query: 246 LVNAFKDYGGNDRVLLFCR 264 + KD NDR++ + Sbjct: 260 NIELRKDLFQNDRMIKAEK 278 >gi|218961885|ref|YP_001741660.1| modification methylase, HemK family [Candidatus Cloacamonas acidaminovorans] gi|167730542|emb|CAO81454.1| modification methylase, HemK family [Candidatus Cloacamonas acidaminovorans] Length = 273 Score = 253 bits (648), Expect = 1e-65, Method: Composition-based stats. Identities = 81/259 (31%), Positives = 119/259 (45%), Gaps = 8/259 (3%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D + LS ++I+ +L D + + NA R K E I G FY + L Sbjct: 23 DFWFLISYYLHLSRSEIILSRQRILTDWEGEIIGNAFSRLEKGEPPQYITGTAYFYGLDL 82 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 ++ PRPETE LV+ + + RILD+GTG+GA+ +AL P Sbjct: 83 KVNPAVLIPRPETERLVELTMERL------KGTERILDIGTGSGAIAIALKHNLPSLNVS 136 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185 +IS ALE AK NA SD F V+ ++V++SNPPYI + L Sbjct: 137 ATEISFSALETAKKNAEIYRAD--IHFYLSDCFPPVKQSYEVLISNPPYISKAEIATLNS 194 Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245 ++D +P I+L GG DGL YR + S +L+++G ++E QK ++ I Sbjct: 195 RIKDKEPVIALQGGEDGLDFYRKLLSESSEYLSENGFLALEHSDTQKEAIMNIARKEGWT 254 Query: 246 LVNAFKDYGGNDRVLLFCR 264 + KD DR L R Sbjct: 255 KIEPLKDLTDKDRYLFIYR 273 >gi|309792621|ref|ZP_07687082.1| modification methylase, HemK family [Oscillochloris trichoides DG6] gi|308225343|gb|EFO79110.1| modification methylase, HemK family [Oscillochloris trichoides DG6] Length = 274 Score = 253 bits (648), Expect = 1e-65, Method: Composition-based stats. Identities = 80/260 (30%), Positives = 125/260 (48%), Gaps = 8/260 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 D+ L + +++ + + + N + R E + ++G ++FY Sbjct: 15 PRLDAELLLSHLLAWPRARLLAERAAPIAPPVAEAFMNLVERRATGEPVAYLVGHKEFYG 74 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 L + PRPETELLV+ ALA R + RI DLGTG+GA+ +AL + P Sbjct: 75 YELLVDRRVLVPRPETELLVEVALAGLGDR---QAAWRIADLGTGSGAIAVALGLQLPHA 131 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182 + VD+S ALE+A +N + +SER +Q D + + G +D+IVSNPPY I+ Sbjct: 132 QIEAVDLSADALEVAAANVQRHALSERVRLMQGDLCAPLAGHYDLIVSNPPY---TILAE 188 Query: 183 LGLEVRDFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 + V +P ++L+ GG DG YR I +HL G EIG Q V + ++ Sbjct: 189 VEPNVLAHEPHLALEGGGADGADFYRRIFATAPQHLRAGGAIVCEIGAWQGEIVSALAQA 248 Query: 242 R-KLFLVNAFKDYGGNDRVL 260 V + D G+ RV+ Sbjct: 249 AFPTDEVRLYHDLAGHARVV 268 >gi|50914206|ref|YP_060178.1| peptide release factor-glutamine N5-methyltransferase [Streptococcus pyogenes MGAS10394] gi|306827354|ref|ZP_07460641.1| protein-(glutamine-N5) methyltransferase [Streptococcus pyogenes ATCC 10782] gi|50903280|gb|AAT86995.1| Peptide release factor-glutamine N5-methyltransferase [Streptococcus pyogenes MGAS10394] gi|304430501|gb|EFM33523.1| protein-(glutamine-N5) methyltransferase [Streptococcus pyogenes ATCC 10782] Length = 279 Score = 253 bits (648), Expect = 1e-65, Method: Composition-based stats. Identities = 75/251 (29%), Positives = 124/251 (49%), Gaps = 8/251 (3%) Query: 12 CRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDT 71 + SS +++ + + L + +H S I G F +++L + Sbjct: 29 SEIKEWSSLDMLIHQNQAVTPEDAVLLEHIFCSLSQHLSPQYITGNAYFRDLKLAVDKRV 88 Query: 72 FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131 PRPETE LVD LA +L + +LD+GTG+GA+ ++L KE P ++ DIS Sbjct: 89 LIPRPETEELVDMILAENLDA-----PLNVLDIGTGSGAIAISLKKERPNWQVTASDISR 143 Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFD 191 AL++AK+NA + ++SD FS + G FD+IVSNPPYI + + L V + Sbjct: 144 AALDLAKANADAYQLD--ITFIESDVFSLISGTFDIIVSNPPYISYEDKEEVSLNVLQSE 201 Query: 192 PRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAF 250 P ++L +G + YR I + +L K+G EIGY Q + + ++ + Sbjct: 202 PHLALFAKENGYAIYRKIIEQADNYLTKEGKLYFEIGYKQAEGIKDMLQAYFPQRHIRVV 261 Query: 251 KDYGGNDRVLL 261 D G +R+++ Sbjct: 262 TDIFGKERMVV 272 >gi|227871846|ref|ZP_03990246.1| polypeptide chain release factor methyltransferase [Oribacterium sinus F0268] gi|227842304|gb|EEJ52534.1| polypeptide chain release factor methyltransferase [Oribacterium sinus F0268] Length = 346 Score = 253 bits (648), Expect = 1e-65, Method: Composition-based stats. Identities = 86/295 (29%), Positives = 133/295 (45%), Gaps = 43/295 (14%) Query: 8 HSFLCRVTGLSSHQVIVDPDSVLDD---RQRFFLTNA------IVRSLKHESIHRILGWR 58 L L++ ++ L Q L + + + +ILG + Sbjct: 47 RLLLQESFSLNTAGYLLRKQEPLCKAGIEQTEILQKLHSFYENFEKRRRRIPLAQILGRQ 106 Query: 59 DFYNVRLTLSSDTFEPRPETELLVDSALAF-------------SLPRIEKRDVVR----- 100 FY + ++ D PR +TE LVD L +EK++ Sbjct: 107 SFYGLDFFVNEDVLIPRADTECLVDLVLEDYADLAKQAGKTYAEKQNLEKQNSEHVSNKH 166 Query: 101 --------------ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146 ILDL TG+G + +++ K P+ + + VD+S KAL +AK NA + + Sbjct: 167 EDNVENGAISSSLNILDLCTGSGCIGISVAKHLPYQELLLVDLSEKALAVAKKNAEKH-L 225 Query: 147 SERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSH 205 E LQSD ++V+G F +++SNPPYI S ++ L EV +++P+++LDGG DGL Sbjct: 226 GENVRLLQSDLLTAVQGKKFSLLLSNPPYIVSRVIPGLEREVSEYEPKMALDGGEDGLLF 285 Query: 206 YRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 YR IA + L +EIGY+Q V IF+ V F D GN RV+ Sbjct: 286 YRRIAKEAKKVLLPGARLYLEIGYDQGESVKDIFQKEGYEAVEVFPDLSGNPRVV 340 >gi|56707339|ref|YP_169235.1| hemK protein [Francisella tularensis subsp. tularensis SCHU S4] gi|110669809|ref|YP_666366.1| hemK protein [Francisella tularensis subsp. tularensis FSC198] gi|134301376|ref|YP_001121344.1| HemK family methyltransferase [Francisella tularensis subsp. tularensis WY96-3418] gi|224456402|ref|ZP_03664875.1| HemK family methyltransferase [Francisella tularensis subsp. tularensis MA00-2987] gi|254370016|ref|ZP_04986023.1| modification methylase [Francisella tularensis subsp. tularensis FSC033] gi|254874174|ref|ZP_05246884.1| methyltransferase [Francisella tularensis subsp. tularensis MA00-2987] gi|56603831|emb|CAG44802.1| hemK protein homolog [Francisella tularensis subsp. tularensis SCHU S4] gi|110320142|emb|CAL08185.1| hemK protein homolog [Francisella tularensis subsp. tularensis FSC198] gi|134049153|gb|ABO46224.1| methyltransferase, hemK family [Francisella tularensis subsp. tularensis WY96-3418] gi|151568261|gb|EDN33915.1| modification methylase [Francisella tularensis subsp. tularensis FSC033] gi|254840173|gb|EET18609.1| methyltransferase [Francisella tularensis subsp. tularensis MA00-2987] gi|282158464|gb|ADA77855.1| methyltransferase, hemK family protein [Francisella tularensis subsp. tularensis NE061598] Length = 284 Score = 253 bits (648), Expect = 1e-65, Method: Composition-based stats. Identities = 82/258 (31%), Positives = 130/258 (50%), Gaps = 6/258 (2%) Query: 4 LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63 D +C V G+ + ++ D LD + I+R L E + ILG++ F+N Sbjct: 25 KHDLQMIICDVLGVDKTYLYINLDKQLDKNTLKKIDEKILRLLAGEPLAYILGYKYFWNQ 84 Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 +L ++ DT PR +TE +V + L K ++ILDLGTGTGA+ LAL E + Sbjct: 85 KLYVTKDTLIPRADTETVVATVLDDIQ---NKDAQLKILDLGTGTGAIALALAAELANSQ 141 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDC 182 V VD+ ++L++AK NA N ++ +QS W+++++ FD+IVSNPPYI+ Sbjct: 142 VVAVDLYQQSLDVAKKNAQANNIT-NVKFIQSSWYTNLDTDKFDIIVSNPPYIDLADT-N 199 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 + V+D++P +L +GL+ R I LN G +E G+ Q + +F Sbjct: 200 IDQSVKDYEPARALFAADNGLADIRIIISQAKDFLNLGGFIYIEHGFTQADAITALFSQC 259 Query: 243 KLFLVNAFKDYGGNDRVL 260 + KD NDR Sbjct: 260 NFTDIKIVKDLNNNDRCT 277 >gi|115315349|ref|YP_764072.1| hemK methylase [Francisella tularensis subsp. holarctica OSU18] gi|254369839|ref|ZP_04985849.1| hypothetical protein FTAG_01187 [Francisella tularensis subsp. holarctica FSC022] gi|115130248|gb|ABI83435.1| hemK methylase [Francisella tularensis subsp. holarctica OSU18] gi|157122798|gb|EDO66927.1| hypothetical protein FTAG_01187 [Francisella tularensis subsp. holarctica FSC022] Length = 284 Score = 253 bits (648), Expect = 1e-65, Method: Composition-based stats. Identities = 82/258 (31%), Positives = 130/258 (50%), Gaps = 6/258 (2%) Query: 4 LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63 D +C V G+ + ++ D LD + I+R L E + ILG++ F+N Sbjct: 25 KHDLQMIICDVLGVDKTYLYINSDKQLDKNTLKKIDEKILRLLAGEPLAYILGYKYFWNQ 84 Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 +L ++ DT PR +TE +V + L K ++ILDLGTGTGA+ LAL E + Sbjct: 85 KLYVTKDTLIPRADTETVVATVLDDIQ---NKDAQLKILDLGTGTGAIALALAAELANSQ 141 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDC 182 V VD+ ++L++AK NA N ++ +QS W+++++ FD+IVSNPPYI+ Sbjct: 142 VVAVDLYQQSLDVAKKNAQANNIT-NVKFIQSSWYTNLDTDKFDIIVSNPPYIDLADT-N 199 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 + V+D++P +L +GL+ R I LN G +E G+ Q + +F Sbjct: 200 IDQSVKDYEPARALFAADNGLADIRIIISQAKDFLNLGGFIYIEHGFTQADAITALFSQC 259 Query: 243 KLFLVNAFKDYGGNDRVL 260 + KD NDR Sbjct: 260 NFTDIKIVKDLNNNDRCT 277 >gi|225386764|ref|ZP_03756528.1| hypothetical protein CLOSTASPAR_00512 [Clostridium asparagiforme DSM 15981] gi|225047126|gb|EEG57372.1| hypothetical protein CLOSTASPAR_00512 [Clostridium asparagiforme DSM 15981] Length = 342 Score = 253 bits (648), Expect = 1e-65, Method: Composition-based stats. Identities = 80/315 (25%), Positives = 129/315 (40%), Gaps = 61/315 (19%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLD-----DRQRFFLTNAIVRSLKHESIHRILG 56 A D+ L GL + + +D + I R + + ++LG Sbjct: 21 DAGLDARYLLLDAFGLGLASFLANRGRNVDGMPGGAEKAQVYEALITRRAERIPLQQLLG 80 Query: 57 WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116 ++F + ++ PR +TE LV+ L +KR + +LD+ TG+G + ++L Sbjct: 81 VQEFMGLEFFVNEHVLIPRQDTETLVELVLEE-----QKRRDLDVLDVCTGSGCIAVSLA 135 Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTN--GVSERFDTLQSDWFSSVEG----------- 163 + + +D+S +AL++A+ NA F +QSD F+ +E Sbjct: 136 RLGRYASVTALDVSAEALKVAEKNAAALLGEYDGDFRLVQSDMFAGLETKGLQEQKPVEP 195 Query: 164 --------------------------------------LFDVIVSNPPYIESVIVDCLGL 185 FD++VSNPPYI S +++ L Sbjct: 196 DTSREQTSGEPDAWQGRTAVKPAVAGELPCRLCVPCTLRFDILVSNPPYIPSQVIEGLEP 255 Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245 EVRD +PR++LDG DGL YR +A R L G EIG++Q V + E Sbjct: 256 EVRDHEPRLALDGSPDGLKFYRILASEGKRFLRPGGAVYFEIGWDQAQAVSALLEQEGFA 315 Query: 246 LVNAFKDYGGNDRVL 260 + KD G DRV+ Sbjct: 316 RIRTVKDMAGMDRVV 330 >gi|149918412|ref|ZP_01906902.1| Modification methylase HemK [Plesiocystis pacifica SIR-1] gi|149820712|gb|EDM80122.1| Modification methylase HemK [Plesiocystis pacifica SIR-1] Length = 304 Score = 253 bits (648), Expect = 1e-65, Method: Composition-based stats. Identities = 85/270 (31%), Positives = 126/270 (46%), Gaps = 9/270 (3%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 A D+ L + S + + +LD+ QR + R L E + I G R F+ Sbjct: 31 DARVDAEHLLAQALDCSRMDLYLRHAELLDEAQRAPFRELVRRRLSREPVAYIEGARGFH 90 Query: 62 --NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119 ++ L + PRPETE LVD L R ++ +LD+GTG+GA+ LA+ K Sbjct: 91 ALDLELAVDRRVLIPRPETEHLVDWLLEDL--REPPAPLMDVLDVGTGSGAIALAVAKAR 148 Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIE 176 VD S AL++A+ NA +G+ ER +++ VE G + I +N PYI Sbjct: 149 YEVTVTAVDASTDALDVARQNAERHGLGERVRLRRANLLDGVEDPPGGWTAIAANLPYIP 208 Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS--RHLNKDGLCSVEIGYNQKVD 234 + L EVRDF+PR +L GG DGL R + V+ R L G +EIG Q + Sbjct: 209 AADWAQLAPEVRDFEPRGALVGGDDGLDLVRRLITQVAERRALAPGGGLYLEIGVGQAAE 268 Query: 235 VVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 V + + V + DY R++ R Sbjct: 269 VEALLRAAGFVGVASRDDYAKIPRIVAGYR 298 >gi|308175428|ref|YP_003922133.1| glutamine methylase of release factor 1 [Bacillus amyloliquefaciens DSM 7] gi|307608292|emb|CBI44663.1| glutamine methylase of release factor 1 [Bacillus amyloliquefaciens DSM 7] Length = 286 Score = 253 bits (648), Expect = 2e-65, Method: Composition-based stats. Identities = 77/266 (28%), Positives = 119/266 (44%), Gaps = 9/266 (3%) Query: 2 QALRD---SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWR 58 +A R+ + L TG+ +++ + + + + + + + I I+G Sbjct: 17 EAGREKNAAELLLLNDTGMDRSKLLANLQEPVGEDELYRFRRHVEMHKEGVPIQYIIGKE 76 Query: 59 DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118 FY ++ D PRPETE +V L + + + ++D+GTG+GA+ + L E Sbjct: 77 QFYGREFFVNFDVLIPRPETEEVVFHLLDKQKRVFSEGERLNVIDIGTGSGAIAVTLALE 136 Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYI 175 F DIS +AL++A+ NA G RF LQ D + D+IVSNPPYI Sbjct: 137 CGHFSVAASDISKEALQVAERNAQNLGADVRF--LQGDLLTPFISSGKKADIIVSNPPYI 194 Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235 + L VR +P +L G DGL Y+ + + + L EIGYNQ V Sbjct: 195 SEEEMADLSDIVRFHEPLHALTDGGDGLKFYKRFMEDLPLVMKDKALVVFEIGYNQGKAV 254 Query: 236 VRIFE-SRKLFLVNAFKDYGGNDRVL 260 +F S V KD G DR + Sbjct: 255 EDLFRHSFPNAEVEVVKDINGKDRTV 280 >gi|320546677|ref|ZP_08040989.1| protein-(glutamine-N5) methyltransferase [Streptococcus equinus ATCC 9812] gi|320448732|gb|EFW89463.1| protein-(glutamine-N5) methyltransferase [Streptococcus equinus ATCC 9812] Length = 276 Score = 253 bits (648), Expect = 2e-65, Method: Composition-based stats. Identities = 76/248 (30%), Positives = 124/248 (50%), Gaps = 8/248 (3%) Query: 16 GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75 G S I+ + + + + + + + + +H S I G F ++ L + PR Sbjct: 33 GWSLLDFILHQNKDVSTQDQALIEDIMSQLKEHRSPQYITGKAYFRDLELDVDERVLIPR 92 Query: 76 PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135 PETE LVD L + + ++ILD+GTG+GA+ ++L P + DIS +AL+ Sbjct: 93 PETEELVDLVLKEN-----SKADLQILDIGTGSGAIAISLKSARPDWHVTASDISSEALQ 147 Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195 +AK N+ D ++SD F+ + G FDVI+SNPPYI +G+ V +P ++ Sbjct: 148 LAKENSER--KQVSLDFIESDVFNQISGKFDVIISNPPYIAYDDEGEVGVNVLASEPHLA 205 Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDYG 254 L DG + YR I +G + HL ++G EIGY Q + R+ V +D Sbjct: 206 LFADEDGFAIYRRIIEGANSHLTENGKLYFEIGYKQGDGMRRLLAQHFPEKRVRVLQDVF 265 Query: 255 GNDRVLLF 262 G DR+++ Sbjct: 266 GKDRMVVM 273 >gi|15605689|ref|NP_213065.1| protoporphyrinogen oxidase [Aquifex aeolicus VF5] gi|6225500|sp|O66506|HEMK_AQUAE RecName: Full=Protein methyltransferase hemK homolog; AltName: Full=M.AaoHemKP gi|2982836|gb|AAC06458.1| protoporphyrinogen oxidase [Aquifex aeolicus VF5] Length = 281 Score = 253 bits (648), Expect = 2e-65, Method: Composition-based stats. Identities = 79/264 (29%), Positives = 126/264 (47%), Gaps = 7/264 (2%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 + RD+ L + +S Q+ + + + + K ++G + Sbjct: 22 EYRRDAEIILSYLLKVSPSQIPLMYAREIPEEIVKRFFKQMKERKKGIPTAYVIGEWECM 81 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 + PRPETE+L++ +L I + + +LG+GTG + + LL E P Sbjct: 82 GRVFKVKKGVLVPRPETEILIE----RTLELIPQDREMVGFELGSGTGCISINLLIERPK 137 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIV 180 D++ A+E+ K NA + V +R + F V+G FD IVSNPPYI Sbjct: 138 LVMYATDVNPDAVELTKENAKLHKVDDRLFVFLGNAFEPVKGMKFDFIVSNPPYIPENFW 197 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 + L EV+ + SL GG G Y IA+ ++HL ++G ++EIG++Q V + E Sbjct: 198 EILPEEVKK-EGYTSLIGGKKGWEFYELIAEEGTKHLKENGFIALEIGHDQGKVVKELLE 256 Query: 241 SRKLFLVNAFKDYGGNDRVLLFCR 264 +K F VN FKDY G DRV++ R Sbjct: 257 -KKCFKVNIFKDYAGFDRVVIAQR 279 >gi|313636274|gb|EFS02085.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Listeria seeligeri FSL S4-171] Length = 283 Score = 253 bits (647), Expect = 2e-65, Method: Composition-based stats. Identities = 75/258 (29%), Positives = 113/258 (43%), Gaps = 10/258 (3%) Query: 7 SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66 + L GLS ++ ++ + L+ R L E + IL FY Sbjct: 25 AEILLETRMGLSRSELWMEINRELEPNHEKQFQADFERYLSGEPVQYILKTAPFYGYDFL 84 Query: 67 LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126 ++ D PRPETE LV A + ++K + +LD+ TG+G + + L K P Sbjct: 85 VTEDVLIPRPETEELV----ACAEAFLKKNPLPTVLDVCTGSGIIAITLKKAFPEVLVTA 140 Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG---LFDVIVSNPPYIESVIVDCL 183 DIS AL IAK NA+ RF +++D S + FD++++NPPYI + Sbjct: 141 SDISGPALAIAKKNALLLNADVRF--VETDLLESFKQNGERFDMVLANPPYISEAEKAEM 198 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE-SR 242 V +P ++L DGL+ Y + + LN VEIGY Q V +F+ S Sbjct: 199 SDYVLKNEPALALFAENDGLAIYERFVEDLQYVLNPSFWVGVEIGYTQGEKVKDLFQKSY 258 Query: 243 KLFLVNAFKDYGGNDRVL 260 V KD DR + Sbjct: 259 PHSTVVIHKDINSKDRYV 276 >gi|116873907|ref|YP_850688.1| HemK family modification methylase [Listeria welshimeri serovar 6b str. SLCC5334] gi|116742785|emb|CAK21909.1| modification methylase, HemK family [Listeria welshimeri serovar 6b str. SLCC5334] Length = 283 Score = 253 bits (647), Expect = 2e-65, Method: Composition-based stats. Identities = 77/258 (29%), Positives = 115/258 (44%), Gaps = 10/258 (3%) Query: 7 SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66 + L GLS ++ ++ L+ R L E + IL FY Sbjct: 25 AEILLETRMGLSRSELWMEMSRELEPNHEEQFQADFDRYLAGEPVQYILKTAPFYGYDFL 84 Query: 67 LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126 ++ D PRPETE LV A + ++K V+ +LD+ TG+G + +AL K P Sbjct: 85 VTEDVLIPRPETEELV----ACAETFLKKHPVMNVLDVCTGSGIIAIALKKAFPNITFTA 140 Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG---LFDVIVSNPPYIESVIVDCL 183 DIS AL +AK NA+ RF +++D + + FD+I++NPPYI + Sbjct: 141 SDISGPALAVAKKNALLLNADIRF--VETDLLETFKHNGERFDMIIANPPYISEAEKAAM 198 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE-SR 242 V +P ++L DG++ Y D + LN VEIGY Q V ++FE S Sbjct: 199 SDYVLKNEPSLALFAENDGMAIYERFVDNLKYVLNTSFWVGVEIGYTQGERVKQLFEKSY 258 Query: 243 KLFLVNAFKDYGGNDRVL 260 V KD DR + Sbjct: 259 PHSTVLIHKDINSKDRYV 276 >gi|332529975|ref|ZP_08405925.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Hylemonella gracilis ATCC 19624] gi|332040448|gb|EGI76824.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Hylemonella gracilis ATCC 19624] Length = 283 Score = 253 bits (647), Expect = 2e-65, Method: Composition-based stats. Identities = 66/264 (25%), Positives = 108/264 (40%), Gaps = 13/264 (4%) Query: 4 LRDSHSFLCRVTG---LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60 R++ L + +I L R + + G +F Sbjct: 18 RREAQLLLLHALDKPLIDRAWLIAHDTDSLAGTAELRYIELARRRASGTPLPYLTGKIEF 77 Query: 61 YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIE-KRDVVRILDLGTGTGAVCLALLKES 119 + + L + PRP+TE LVD AL + + +I+DLGTG+GAV LA+ + Sbjct: 78 HGMPLQVDGRVLIPRPDTETLVDWALECLTDIGQAEDPPPQIIDLGTGSGAVALAMARFL 137 Query: 120 PFF----KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYI 175 + +D+S AL +A++NA + R + W + + +D+IVSNPPYI Sbjct: 138 AQTGRTGEVHALDVSPDALALAQANAERLDL--RVQFMLGAWLTGISARYDLIVSNPPYI 195 Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235 +PR++L G DGL R I +L G +E G++Q + V Sbjct: 196 AEGDPHL---AALGHEPRLALISGPDGLDAIRIIVRQAPDNLRPGGWLLLEHGWDQALAV 252 Query: 236 VRIFESRKLFLVNAFKDYGGNDRV 259 + V + +D G +R Sbjct: 253 RELLTRAGFADVQSRRDLAGIERC 276 >gi|311070219|ref|YP_003975142.1| glutamine methylase [Bacillus atrophaeus 1942] gi|310870736|gb|ADP34211.1| glutamine methylase [Bacillus atrophaeus 1942] Length = 288 Score = 253 bits (647), Expect = 2e-65, Method: Composition-based stats. Identities = 74/266 (27%), Positives = 117/266 (43%), Gaps = 9/266 (3%) Query: 2 QALRD---SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWR 58 +A RD + L G+ ++ + + + + + + + I+G Sbjct: 17 EAGRDRNAAELLLMNDIGMDRSKLFASLQDPISEDELYRFKRHVEMHKEGVPVQYIIGKE 76 Query: 59 DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118 FY ++ D PRPETE +V L + + +R++D+GTG+GA+ + L E Sbjct: 77 AFYGRVFIVNDDVLIPRPETEEVVLHLLEKQKRVFPEGEPLRVIDVGTGSGAIAVTLALE 136 Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYI 175 + F +DIS +AL+IA NA G + D + D D+IVSNPPYI Sbjct: 137 NKHFSVSAIDISKEALQIAAENAERLGA--KVDFFEGDLLEPFIKEGKKADIIVSNPPYI 194 Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235 + L VR +P +L G DGL Y+ + + R +N L EIG+ Q V Sbjct: 195 SEEEMADLSNVVRFHEPLHALTDGGDGLRFYKRFMEDIPRVMNDKALVVFEIGWKQGDAV 254 Query: 236 VRIF-ESRKLFLVNAFKDYGGNDRVL 260 +F + V KD G DR + Sbjct: 255 KEMFLRTFPNAEVEVLKDINGKDRTV 280 >gi|71903503|ref|YP_280306.1| peptide release factor-glutamine N5-methyltransferase [Streptococcus pyogenes MGAS6180] gi|71802598|gb|AAX71951.1| peptide release factor-glutamine N5-methyltransferase [Streptococcus pyogenes MGAS6180] Length = 279 Score = 253 bits (647), Expect = 2e-65, Method: Composition-based stats. Identities = 75/246 (30%), Positives = 123/246 (50%), Gaps = 8/246 (3%) Query: 17 LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRP 76 SS +++ + + L + +H S I G F +++L + PRP Sbjct: 34 WSSLDMLIHQNQAVTPEDAVLLEHIFCSLSQHLSPQYITGNAYFRDLKLAVDKRVLIPRP 93 Query: 77 ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136 ETE LVD LA +L + +LD+GTG+GA+ ++L KE P ++ DIS AL++ Sbjct: 94 ETEELVDMILAENLDA-----PLNVLDIGTGSGAIAISLKKERPNWQVTASDISRAALDL 148 Query: 137 AKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL 196 AK+NA + ++SD FS + G FD+IVSNPPYI + + L V +P ++L Sbjct: 149 AKANADAYQLD--ITFIESDVFSLISGTFDIIVSNPPYISYEDKEEVSLNVLQSEPHLAL 206 Query: 197 DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDYGG 255 +G + YR I + +L K+G EIGY Q + + ++ + D G Sbjct: 207 FAKENGYAIYRKIIEQADNYLTKEGKLYFEIGYKQAEGIKDMLQAYFPQRHIRVVTDIFG 266 Query: 256 NDRVLL 261 +R+++ Sbjct: 267 KERMVV 272 >gi|208779476|ref|ZP_03246821.1| methyltransferase, HemK family [Francisella novicida FTG] gi|208744437|gb|EDZ90736.1| methyltransferase, HemK family [Francisella novicida FTG] Length = 284 Score = 253 bits (647), Expect = 2e-65, Method: Composition-based stats. Identities = 81/258 (31%), Positives = 130/258 (50%), Gaps = 6/258 (2%) Query: 4 LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63 D +C V G+ + ++ D LD + I+R L E + ILG++ F+N Sbjct: 25 KHDLQMIICDVLGVDKAYLYINSDKQLDKNTLKKIDEKILRLLAGEPLAYILGYKYFWNQ 84 Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 +L ++ DT PR +TE +V + L K ++ILDLGTGTGA+ LA+ E + Sbjct: 85 KLYVTKDTLIPRADTETVVATVLDDIQ---NKDAQLKILDLGTGTGAIALAIAAELANSQ 141 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDC 182 V VD+ ++L++AK NA N ++ +QS W+++++ FD+IVSNPPYI+ Sbjct: 142 VVAVDLYQQSLDVAKKNAQANNIT-NVKFIQSSWYTNLDTDKFDIIVSNPPYIDLADT-N 199 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 + V+D++P +L +GL+ R I LN G +E G+ Q + +F Sbjct: 200 IDQSVKDYEPARALFAADNGLADIRIIISQAKDFLNLGGFVYIEHGFTQADAIKALFSQY 259 Query: 243 KLFLVNAFKDYGGNDRVL 260 + KD NDR Sbjct: 260 NFTHIKTVKDLNNNDRCT 277 >gi|52425246|ref|YP_088383.1| HemK protein [Mannheimia succiniciproducens MBEL55E] gi|52307298|gb|AAU37798.1| HemK protein [Mannheimia succiniciproducens MBEL55E] Length = 340 Score = 253 bits (647), Expect = 2e-65, Method: Composition-based stats. Identities = 94/278 (33%), Positives = 140/278 (50%), Gaps = 19/278 (6%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 D++ L VT S +I D++L + + L+ +VR + E I ILG +DF+ Sbjct: 62 NPKVDANRLLQFVTQKSKGTIIAFSDTLLTENESALLSQYLVRRCEGEPIAYILGEQDFW 121 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV---VRILDLGTGTG--------- 109 ++ L +S DT PRP+TE+LV+ AL F+ R+ + ILDLGTGTG Sbjct: 122 SLNLEVSPDTLIPRPDTEILVEKALEFAKFRLNSPHFSGELAILDLGTGTGAIALALAAE 181 Query: 110 AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVI 168 ++ K + +GVD++ A+E+AK NA+ N + + + LQS+WF +E FD+I Sbjct: 182 LAPIS-QKCGAKLRILGVDLTNGAVELAKRNALRNQLP-QVEFLQSNWFEQLENRQFDII 239 Query: 169 VSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228 V NPPYI+ +VR F+P +L G + R I + HL G +E G Sbjct: 240 VGNPPYIDRQDEHLALGDVR-FEPLTALVAEDSGYADLRHIIERAPFHLKHQGWLILEHG 298 Query: 229 YNQKVDVVRI---FESRKLFLVNAFKDYGGNDRVLLFC 263 + Q V I F V KDYG N+R+ L C Sbjct: 299 WQQGQKVRSIFNEFSQNYWQQVATMKDYGDNERITLGC 336 >gi|254504444|ref|ZP_05116595.1| methyltransferase, HemK family [Labrenzia alexandrii DFL-11] gi|222440515|gb|EEE47194.1| methyltransferase, HemK family [Labrenzia alexandrii DFL-11] Length = 280 Score = 253 bits (647), Expect = 2e-65, Method: Composition-based stats. Identities = 84/262 (32%), Positives = 130/262 (49%), Gaps = 4/262 (1%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 D+ + +S ++++ + D + L + + RILG R+FY Sbjct: 22 PELDAKLLVSAALRISVSELLLRESGEVPDAAAGIALEYAAQRLNGKPVGRILGEREFYG 81 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 L+ T EPRP+TE L+++ L P + + D+GTGTGA+ + LL E Sbjct: 82 RTFRLNHATLEPRPDTETLIETVLKDCDPT----RPLTMCDIGTGTGAIAVTLLAELQKA 137 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182 V VDIS AL A SNA +GV RF ++SD+ ++++ FD ++SNPPYI + ++ Sbjct: 138 VMVAVDISEDALGCAVSNAENHGVGARFLPVRSDYAAALQHGFDWVISNPPYIRTPVLRE 197 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 L EV DP ++LDGG DGL YR I + L G ++EIG +Q ++ Sbjct: 198 LSKEVLQHDPILALDGGADGLEGYRQIVSQAASVLVPGGRIALEIGRDQGEELKNQLRHH 257 Query: 243 KLFLVNAFKDYGGNDRVLLFCR 264 ++ +D G DRV R Sbjct: 258 GFEAIDIIQDLGRRDRVATARR 279 >gi|15672580|ref|NP_266754.1| protoporphyrinogen oxidase [Lactococcus lactis subsp. lactis Il1403] gi|281491064|ref|YP_003353044.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Lactococcus lactis subsp. lactis KF147] gi|12723493|gb|AAK04696.1|AE006293_2 protoporphyrinogen oxidase [Lactococcus lactis subsp. lactis Il1403] gi|281374822|gb|ADA64342.1| Protein-(glutamine-N5) methyltransferase, release factor-specific [Lactococcus lactis subsp. lactis KF147] gi|326406099|gb|ADZ63170.1| methylase of polypeptide chain release factor [Lactococcus lactis subsp. lactis CV56] Length = 270 Score = 253 bits (647), Expect = 2e-65, Method: Composition-based stats. Identities = 78/234 (33%), Positives = 123/234 (52%), Gaps = 8/234 (3%) Query: 28 SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALA 87 + D++ LT R ++E I+GW +F +++L + PRPETE LV+ LA Sbjct: 41 EKITDQELKLLTEVSKRLHQNEPPQYIVGWAEFRDLKLKVDERVLIPRPETEELVEMILA 100 Query: 88 FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147 + ++D ++ILD+GTG+GA+ ++L + + DIS +AL +A NA N Sbjct: 101 EN-----EKDSLKILDIGTGSGAIAISLAQARENWSVKASDISKEALTLAAENAEIN--Q 153 Query: 148 ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207 + +QSD + FD+IVSNPPYI + V ++P ++L GL+ Y+ Sbjct: 154 ANLEFIQSDVLDKITDSFDIIVSNPPYIAFDETYEMDNSVIKYEPDLALFAENQGLAIYQ 213 Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL-FLVNAFKDYGGNDRVL 260 IAD HL +G +EIGY Q V IF+ + LV+ +D G DR++ Sbjct: 214 KIADQAVNHLTDNGKIYLEIGYKQGQAVQAIFQEKFTDKLVSIHQDIFGKDRMI 267 >gi|217969846|ref|YP_002355080.1| modification methylase, HemK family [Thauera sp. MZ1T] gi|217507173|gb|ACK54184.1| modification methylase, HemK family [Thauera sp. MZ1T] Length = 289 Score = 253 bits (646), Expect = 2e-65, Method: Composition-based stats. Identities = 78/255 (30%), Positives = 119/255 (46%), Gaps = 8/255 (3%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L V + +++ P+ L + R + + G R+FY Sbjct: 28 DARVLLRHVLQCPAARLVAWPEQKLAAEDWAEYRALVERRAAGVPVAYLTGTREFYGREF 87 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 ++ PRPETELLV+ ALA R +R+LDLGTG+GA+ + L E + V Sbjct: 88 LVTPAVLIPRPETELLVELALA----HFPGRRGLRVLDLGTGSGALAVTLALELEAAEVV 143 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLG 184 +D S +AL +A +NA G S +QSDWF ++ + F++IVSNPPY+ + Sbjct: 144 ALDRSREALWVAMANAARLGAS--VSFVQSDWFGALGDEHFELIVSNPPYVAAGDPHLEQ 201 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 +VR F+PR +L G GL I G L G +E GY+Q + Sbjct: 202 GDVR-FEPRGALAAGPQGLDDLAEIVAGAPARLVDGGWLFLEHGYDQAASARGLLADAGF 260 Query: 245 FLVNAFKDYGGNDRV 259 + ++ D G +RV Sbjct: 261 AAIASWADLAGIERV 275 >gi|138896953|ref|YP_001127406.1| HemK family modification methylase [Geobacillus thermodenitrificans NG80-2] gi|196249771|ref|ZP_03148467.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Geobacillus sp. G11MC16] gi|134268466|gb|ABO68661.1| Modification methylase, HemK family [Geobacillus thermodenitrificans NG80-2] gi|196210647|gb|EDY05410.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Geobacillus sp. G11MC16] Length = 288 Score = 253 bits (646), Expect = 2e-65, Method: Composition-based stats. Identities = 75/265 (28%), Positives = 112/265 (42%), Gaps = 7/265 (2%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSL-KHESIHRILGWRDFYNV 63 R + LC G + +++ + R H I ++G FY Sbjct: 24 RAAEWLLCHHLGTDRAGLFARWREPVEETVYERFAADVRRHAVDHVPIQYLIGHEWFYGR 83 Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 R ++ PRPETE LV L E R+ + ++D+GTG+GA+ + L E+ Sbjct: 84 RFLVNRHVLIPRPETEELVLGVLERLPRLFEGRERIDVVDVGTGSGAIAVTLALENRTLS 143 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL---FDVIVSNPPYIESVIV 180 DIS +AL +A+ NA G R L+ D + DV+VSNPPYI Sbjct: 144 VTATDISEEALTVARENAERLGA--RISFLRGDLLQPLIEQGQTVDVVVSNPPYIPETDA 201 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 L V+D++P +L GG DGL YR A + L L + E+G Q V + Sbjct: 202 ATLSPVVKDYEPHTALFGGRDGLDFYRRFARDLPLVLGTPALAAFEVGAGQGEAVASLLA 261 Query: 241 SR-KLFLVNAFKDYGGNDRVLLFCR 264 + + D G DR++ R Sbjct: 262 AAFPEAEIEVAFDLNGKDRMVYMTR 286 >gi|312877229|ref|ZP_07737198.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Caldicellulosiruptor lactoaceticus 6A] gi|311796038|gb|EFR12398.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Caldicellulosiruptor lactoaceticus 6A] Length = 288 Score = 253 bits (646), Expect = 2e-65, Method: Composition-based stats. Identities = 70/258 (27%), Positives = 121/258 (46%), Gaps = 8/258 (3%) Query: 7 SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66 + + ++ G+ +VI++ + + + NAI R L+ + F Sbjct: 34 ALMMVSQILGIDKAEVILNKGLPVRQDKYEKIVNAISRYLQGYPLQYCTNKAFFMGFEFY 93 Query: 67 LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126 + + PR +TE+LV+ A+ + R + LD+GTG+G + +AL K + Sbjct: 94 VDENVLIPRFDTEVLVEVAIEI----FKGRKNLYFLDIGTGSGCIAVALCKFL-DCNVLA 148 Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCLG 184 VDIS +ALE+A+ NA NGV + ++S+ F ++ FD I+SNPPYI + L Sbjct: 149 VDISERALEVARKNAKLNGVENKILFIRSNLFENIPQNLKFDAILSNPPYISKDEIFELD 208 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 V +P I+L DG ++ IA+ +L G E+G++Q +V RI E Sbjct: 209 PRVLK-EPHIALFSEEDGFWFFKEIANKAKLYLKDSGYIIFEVGFSQAKEVKRILEQNGY 267 Query: 245 FLVNAFKDYGGNDRVLLF 262 + + D +R + Sbjct: 268 KNIKSRNDLNNIERCIFA 285 >gi|139473767|ref|YP_001128483.1| methyltransferase [Streptococcus pyogenes str. Manfredo] gi|134272014|emb|CAM30253.1| putative methyltransferase [Streptococcus pyogenes str. Manfredo] Length = 279 Score = 253 bits (646), Expect = 2e-65, Method: Composition-based stats. Identities = 75/246 (30%), Positives = 123/246 (50%), Gaps = 8/246 (3%) Query: 17 LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRP 76 SS +++ + + L + +H S I G F +++L + PRP Sbjct: 34 WSSLDMLIHQNQAVTPEDAVLLEHIFCSLSQHLSPQYITGNAYFRDLKLAVDKRVLIPRP 93 Query: 77 ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136 ETE LVD LA +L + +LD+GTG+GA+ ++L KE P ++ DIS AL++ Sbjct: 94 ETEELVDMILAENLDA-----PLNVLDIGTGSGAIAISLKKERPNWQVTASDISRTALDL 148 Query: 137 AKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL 196 AK+NA + ++SD FS + G FD+IVSNPPYI + + L V +P ++L Sbjct: 149 AKANADAYQLD--ITFIESDVFSLISGTFDIIVSNPPYISYEDKEEVSLNVLQSEPHLAL 206 Query: 197 DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDYGG 255 +G + YR I + +L K+G EIGY Q + + ++ + D G Sbjct: 207 FAKENGYAIYRKIIEQADNYLTKEGKLYFEIGYKQAEGIKDMLQAYFPQRHIRVVTDIFG 266 Query: 256 NDRVLL 261 +R+++ Sbjct: 267 KERMVV 272 >gi|121997790|ref|YP_001002577.1| HemK family modification methylase [Halorhodospira halophila SL1] gi|121589195|gb|ABM61775.1| [protein release factor]-glutamine N5-methyltransferase [Halorhodospira halophila SL1] Length = 281 Score = 253 bits (646), Expect = 2e-65, Method: Composition-based stats. Identities = 75/263 (28%), Positives = 121/263 (46%), Gaps = 9/263 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A D+ L V G+ + P+ + I R E + ++ +F + Sbjct: 26 ARLDAELLLAEVLGVGRSHLFAFPERPIPAATIEAYRALIARRRTGEPVAYLMRRCEFRD 85 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L+++ PRPETE LV+ A+A ++L+LGTG+GA+ LA+ E P Sbjct: 86 LTLSVTPAVLVPRPETEHLVEQAVACL------PAGGQVLELGTGSGAIALAVAHERPDA 139 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVD 181 + + S AL +A+ N G+SE DW + G FDVIVSNPPY+++ + Sbjct: 140 RITATERSTAALAVAQENRHRLGLSE-VHLTPGDWNEGIPPGPFDVIVSNPPYVQTTAAE 198 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 G + +PR +L G DGL+ R++ + L + G +E G Q V + ++ Sbjct: 199 -WGNGALEHEPREALAAGHDGLADIRSLVPPATAELARGGWLILEHGARQGGAVRELLQA 257 Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264 L V D G +R+ L R Sbjct: 258 AGLEAVRTECDLAGLERLTLGRR 280 >gi|171462957|ref|YP_001797070.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Polynucleobacter necessarius subsp. necessarius STIR1] gi|171192495|gb|ACB43456.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 280 Score = 253 bits (646), Expect = 2e-65, Method: Composition-based stats. Identities = 86/268 (32%), Positives = 134/268 (50%), Gaps = 10/268 (3%) Query: 3 ALRDSHSFLCRVTG----LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWR 58 A ++ + + L ++ + L+D + LK E I ++G R Sbjct: 17 APAEAKILMAYILEKYYELPRSALLSRDELELNDTAFEEWKSLESNRLKGEPIAYLIGKR 76 Query: 59 DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118 F+N+ L ++ PRPETELLV+ L RILDLGTG+GA+ LA+ E Sbjct: 77 GFHNIDLFVAPGVLIPRPETELLVEIGLQEIR---RLNAPTRILDLGTGSGAIALAIAHE 133 Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIE 176 +P D S +AL+IAK+NA ++ + + LQ W+ ++EG FD+I+SNPPYI Sbjct: 134 APQAMVTATDQSNQALDIAKTNAKQLMLTNQVEFLQGSWYEAIEGNAPFDIILSNPPYIA 193 Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236 S + ++R F+P +L D LS TI G +HL +GL +VE ++Q VV Sbjct: 194 SQDLHLKQGDLR-FEPLSALTDHKDSLSCLETIISGARQHLQLNGLIAVEHSFDQSDAVV 252 Query: 237 RIFESRKLFLVNAFKDYGGNDRVLLFCR 264 + + + A D GG+ RV+ + Sbjct: 253 ALMKQAGFHNIQAHFDLGGHYRVVSGRK 280 >gi|119897273|ref|YP_932486.1| HemK protein [Azoarcus sp. BH72] gi|119669686|emb|CAL93599.1| HemK protein [Azoarcus sp. BH72] Length = 278 Score = 253 bits (646), Expect = 3e-65, Method: Composition-based stats. Identities = 78/256 (30%), Positives = 126/256 (49%), Gaps = 8/256 (3%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L + +++ P+ L + + + R ++ E + ++G R+FY Sbjct: 22 DARVLLRYALACPASRLVAWPEQRLSAEEWENFSRLVERRVEGEPVAYLIGEREFYGRSF 81 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 ++ PRP+TELLV+ A+A + VR+LDLGTG+GA+ + L E Sbjct: 82 AVTPAVLIPRPDTELLVELAVA----HFSAQQRVRVLDLGTGSGALAITLALELDAADVT 137 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLG 184 +D S +AL +A +NA G S +QSDWF ++ E F +IV+NPPYI + Sbjct: 138 ALDRSREALWVAMANAARLGAS--VSFVQSDWFDALGEERFQLIVANPPYIAADDAHLEE 195 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 ++R F+PR +L G GL IA HL G +E GY+Q + V + Sbjct: 196 GDLR-FEPRSALAAGTAGLDDLSEIAAAAPAHLEAGGWLFLEHGYDQAMSVRGLLADAGF 254 Query: 245 FLVNAFKDYGGNDRVL 260 ++++KD G +RV Sbjct: 255 AAISSWKDLAGIERVT 270 >gi|307544473|ref|YP_003896952.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Halomonas elongata DSM 2581] gi|307216497|emb|CBV41767.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Halomonas elongata DSM 2581] Length = 282 Score = 253 bits (646), Expect = 3e-65, Method: Composition-based stats. Identities = 80/262 (30%), Positives = 123/262 (46%), Gaps = 8/262 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A D+ LC V G+ + D + I + + + G R+F+ Sbjct: 22 ARLDAEVLLCHVLGVDRAWLYTWGDREAGGSDQARFEALIAARAAGQPVAYLTGEREFWG 81 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L T PRP+TE LV +AL+ R R+LDLGTG+GAV LAL E P + Sbjct: 82 LSLLTGPSTLIPRPDTETLVAAALSRMPAR-----AGRLLDLGTGSGAVALALASERPDW 136 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181 +G+D++ A+ +A+ NA G++ DWF++++ FDVIV+NPPY+ Sbjct: 137 YALGIDLNPGAVALARRNAERLGIA-NVGFRVGDWFAALDESDFDVIVANPPYLADDDPH 195 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+PR +L G GL+ + D L DG +E G Q V + Sbjct: 196 LELGDVR-FEPRGALVAGDQGLADLHHLVDASRHRLVADGWLLLEHGAEQGAAVREALCA 254 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 + V + +D G++RV L Sbjct: 255 KGYQDVASEQDLAGHERVSLGR 276 >gi|89256989|ref|YP_514351.1| modification methylase [Francisella tularensis subsp. holarctica LVS] gi|156503188|ref|YP_001429254.1| methyltransferase, HemK family protein [Francisella tularensis subsp. holarctica FTNF002-00] gi|167009370|ref|ZP_02274301.1| modification methylase [Francisella tularensis subsp. holarctica FSC200] gi|254368244|ref|ZP_04984264.1| modification methylase hemK [Francisella tularensis subsp. holarctica 257] gi|290954491|ref|ZP_06559112.1| methyltransferase, HemK family protein [Francisella tularensis subsp. holarctica URFT1] gi|295312096|ref|ZP_06802909.1| methyltransferase, HemK family protein [Francisella tularensis subsp. holarctica URFT1] gi|89144820|emb|CAJ80159.1| modification methylase [Francisella tularensis subsp. holarctica LVS] gi|134254054|gb|EBA53148.1| modification methylase hemK [Francisella tularensis subsp. holarctica 257] gi|156253791|gb|ABU62297.1| methyltransferase, HemK family protein [Francisella tularensis subsp. holarctica FTNF002-00] Length = 284 Score = 253 bits (646), Expect = 3e-65, Method: Composition-based stats. Identities = 82/258 (31%), Positives = 130/258 (50%), Gaps = 6/258 (2%) Query: 4 LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63 D +C V G+ + ++ D LD + I+R L E + ILG++ F+N Sbjct: 25 KHDLQMIICDVLGVDKTYLYINSDKQLDKNTLKKIDEKILRLLAGEPLAYILGYKYFWNQ 84 Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 +L ++ DT PR +TE +V + L K ++ILDLGTGTGA+ LAL E + Sbjct: 85 KLYVTKDTLIPRADTETVVATVLDDIQ---NKDAQLKILDLGTGTGAIALALAAELANSQ 141 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDC 182 V VD+ ++L++AK NA N ++ +QS W+++++ FD+IVSNPPYI+ Sbjct: 142 VVAVDLYQQSLDVAKKNAQANNIT-NVKFIQSSWYTNLDTDKFDIIVSNPPYIDLADT-N 199 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 + V+D++P +L +GL+ R I LN G +E G+ Q + +F Sbjct: 200 IDQSVKDYEPARALFAADNGLADIRIIISQAKDFLNLGGFIYIEHGFTQADAITALFSQC 259 Query: 243 KLFLVNAFKDYGGNDRVL 260 + KD NDR Sbjct: 260 NFNDIKIVKDLNNNDRCT 277 >gi|310816144|ref|YP_003964108.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Ketogulonicigenium vulgare Y25] gi|308754879|gb|ADO42808.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Ketogulonicigenium vulgare Y25] Length = 276 Score = 253 bits (646), Expect = 3e-65, Method: Composition-based stats. Identities = 92/260 (35%), Positives = 135/260 (51%), Gaps = 8/260 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A RD+ L G++ ++ + V++ Q AI + K + + +I+G R FY Sbjct: 23 AARDARLLLAHALGVAPDRLTLVLPDVVNAAQADAFHAAIAQRAKRQPVAQIIGQRMFYG 82 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 ++ DT +PRPETE+L+ +ALA + R+LD+GTGTG + L LL E+ Sbjct: 83 RNFLVTPDTLDPRPETEVLIAAALA--------QPFTRVLDIGTGTGCILLTLLAENQQA 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182 G GVD+S AL++A+ NAV G+ R + SDW + G FD+IVSNPPYI + Sbjct: 135 VGQGVDLSPAALDVAQRNAVALGLDTRAEFSLSDWGMAATGRFDLIVSNPPYIALDEMAG 194 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 L EV ++P ++L G DGL+ YR I R L+ G VE G Q + I ++ Sbjct: 195 LSPEVTGWEPAMALTDGGDGLAAYRAILADAPRLLSDAGRVIVEFGPTQADAIRAIGDAA 254 Query: 243 KLFLVNAFKDYGGNDRVLLF 262 D G DR L+F Sbjct: 255 GFTSAQLHHDLDGRDRCLVF 274 >gi|304321560|ref|YP_003855203.1| modification methylase, HemK family protein [Parvularcula bermudensis HTCC2503] gi|303300462|gb|ADM10061.1| modification methylase, HemK family protein [Parvularcula bermudensis HTCC2503] Length = 318 Score = 252 bits (645), Expect = 3e-65, Method: Composition-based stats. Identities = 77/262 (29%), Positives = 123/262 (46%), Gaps = 9/262 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A D+ L V G +I + + R + E + + G ++F+ Sbjct: 63 AALDARVLLGHVLGCGPAALIAADQEEVGLEPLTAFAALLDRRRRGEPVAYLTGEQEFFG 122 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 ++ PRPETELLV++AL R+LDLGTG+G + + +L E P Sbjct: 123 RDFHVTPAVLIPRPETELLVEAALRPL------PHGGRLLDLGTGSGCIAVTILAERPDS 176 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182 +G +D+S +AL +A+ NA +GV R + ++ G FD+I+SNPPYI Sbjct: 177 RGEAIDLSAEALAVARINARRHGVEGRLGLAPVPFEAAPSGPFDLILSNPPYIP--DDQS 234 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF-ES 241 L V ++PR +L G DGL YR + +++ L G +EIG +Q V + S Sbjct: 235 LPTSVESYEPRQALRAGADGLDAYRVLGPVIAQRLAPQGTALLEIGADQAAAVTALLRRS 294 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 + V+ +D G DR++ Sbjct: 295 FPVHQVSVKRDLAGLDRMVTIT 316 >gi|257885489|ref|ZP_05665142.1| modification methylase HemK [Enterococcus faecium 1,231,501] gi|257821345|gb|EEV48475.1| modification methylase HemK [Enterococcus faecium 1,231,501] Length = 290 Score = 252 bits (645), Expect = 3e-65, Method: Composition-based stats. Identities = 75/255 (29%), Positives = 120/255 (47%), Gaps = 9/255 (3%) Query: 8 HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67 ++ + + + ++ + + L +LG+ DFY+ RL + Sbjct: 39 QFLFLERKQWKKLDWLLHMNEEISEEEQRLIETDLRLLLADHPPQYLLGYADFYDHRLKV 98 Query: 68 SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 + T PRPETE LV+ L + + ++D+GTGTGA+ ++L + V Sbjct: 99 TEATLIPRPETEELVEWCLDET-----PDVPLEVIDIGTGTGAIAISLKAARRNWHVSAV 153 Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLE 186 D+S +ALE+AK NA G + D V + FDVI+SNPPYI + + Sbjct: 154 DLSEEALEVAKENAQKEGT--KISFYHGDTLGPVMDQQFDVIISNPPYISRNEWELMDES 211 Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLF 245 VR F+P+++L DGL+ Y IA L +G +EIG+ Q V +IF+ Sbjct: 212 VRSFEPKMALFAENDGLAIYEKIAVEAPSVLKSNGKIFLEIGFRQGEAVKKIFQQAFPDK 271 Query: 246 LVNAFKDYGGNDRVL 260 V KD GN+R++ Sbjct: 272 KVKIKKDLFGNERMI 286 >gi|304385308|ref|ZP_07367653.1| protein-(glutamine-N5) methyltransferase [Pediococcus acidilactici DSM 20284] gi|304328515|gb|EFL95736.1| protein-(glutamine-N5) methyltransferase [Pediococcus acidilactici DSM 20284] Length = 285 Score = 252 bits (645), Expect = 3e-65, Method: Composition-based stats. Identities = 73/255 (28%), Positives = 118/255 (46%), Gaps = 7/255 (2%) Query: 8 HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67 + + +++V L Q + R++ E + I +FY + Sbjct: 28 ELIMMDRMEWNRTELLVHYRQQLRLDQWQQFQKDVQRAVNGEPVQYITNKANFYGREFYV 87 Query: 68 SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 S PR ETE LV+ L + +R+LD+GTG+G + + L E P ++ V Sbjct: 88 DSRVLIPRVETEELVEHILN---AHPQLNQPLRVLDIGTGSGNIAITLKLERPDWQVTAV 144 Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLE 186 DI+ +AL +A+ NA + D Q F +V+G FD+IVSNPPYI D + Sbjct: 145 DIASEALAVAQQNA--HQQEAVVDFRQGSLFDAVKGERFDIIVSNPPYIAENERDVMDQS 202 Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLF 245 V +++P +L DGL Y+ I ++ HL G E GY+Q + + F + Sbjct: 203 VIEYEPDKALFAPDDGLFWYKQIGRQLANHLTNAGQLWCEFGYHQGAKLKQYFSELPGVK 262 Query: 246 LVNAFKDYGGNDRVL 260 V+ +D G+DR+L Sbjct: 263 DVDVLQDLSGHDRIL 277 >gi|94988611|ref|YP_596712.1| peptide release factor-glutamine N5-methyltransferase [Streptococcus pyogenes MGAS9429] gi|94990487|ref|YP_598587.1| peptide release factor-glutamine N5-methyltransferase [Streptococcus pyogenes MGAS10270] gi|94992435|ref|YP_600534.1| peptide release factor-glutamine N5-methyltransferase [Streptococcus pyogenes MGAS2096] gi|94994409|ref|YP_602507.1| Peptide release factor-glutamine N5-methyltransferase [Streptococcus pyogenes MGAS10750] gi|209559424|ref|YP_002285896.1| Putative protoporphyrinogen oxidase [Streptococcus pyogenes NZ131] gi|94542119|gb|ABF32168.1| peptide release factor-glutamine N5-methyltransferase [Streptococcus pyogenes MGAS9429] gi|94543995|gb|ABF34043.1| Peptide release factor-glutamine N5-methyltransferase [Streptococcus pyogenes MGAS10270] gi|94545943|gb|ABF35990.1| Peptide release factor-glutamine N5-methyltransferase [Streptococcus pyogenes MGAS2096] gi|94547917|gb|ABF37963.1| Peptide release factor-glutamine N5-methyltransferase [Streptococcus pyogenes MGAS10750] gi|209540625|gb|ACI61201.1| Putative protoporphyrinogen oxidase [Streptococcus pyogenes NZ131] Length = 279 Score = 252 bits (645), Expect = 3e-65, Method: Composition-based stats. Identities = 75/246 (30%), Positives = 123/246 (50%), Gaps = 8/246 (3%) Query: 17 LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRP 76 SS +++ + + L + +H S I G F +++L + PRP Sbjct: 34 WSSLDMLIHQNQAVTPEDAVLLEHIFCSLSQHLSPQYITGNAYFRDLKLAVDKRVLIPRP 93 Query: 77 ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136 ETE LVD LA +L + +LD+GTG+GA+ ++L KE P ++ DIS AL++ Sbjct: 94 ETEELVDMILAENLDA-----PLNVLDIGTGSGAIAISLKKERPNWQVTASDISRAALDL 148 Query: 137 AKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL 196 AK+NA + ++SD FS + G FD+IVSNPPYI + + L V +P ++L Sbjct: 149 AKANADAYQLD--ITFIESDVFSLISGTFDIIVSNPPYISYEDKEEVSLNVLQSEPHLAL 206 Query: 197 DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDYGG 255 +G + YR I + +L K+G EIGY Q + + ++ + D G Sbjct: 207 FAKENGYAIYRKIIEQADNYLTKEGKLYFEIGYKQAEGIKDMLQAYFPQRHIRVVTDIFG 266 Query: 256 NDRVLL 261 +R+++ Sbjct: 267 KERMVV 272 >gi|304311493|ref|YP_003811091.1| Protein-glutamine N-methyltransferase [gamma proteobacterium HdN1] gi|301797226|emb|CBL45446.1| Protein-glutamine N-methyltransferase [gamma proteobacterium HdN1] Length = 289 Score = 252 bits (645), Expect = 3e-65, Method: Composition-based stats. Identities = 82/261 (31%), Positives = 128/261 (49%), Gaps = 9/261 (3%) Query: 1 MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60 + D+ LC V + + L+ Q + + R L+ E + +LG ++F Sbjct: 24 LSPQLDAELLLCAVLERGRTWLRIHDGECLNAAQARAFDDWLERRLRGEPVAYLLGCQEF 83 Query: 61 YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120 +++ L ++ T PRP+TE LV+ ALA + + +LDLGTGTGA+ LAL E Sbjct: 84 WSLPLKVAPCTLIPRPDTERLVEVALARA-----PENCTTVLDLGTGTGAIALALKHERR 138 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVI 179 + D A +A NA G+S + L+SDW +++ G FD+IVSNPPYI+ Sbjct: 139 HWHVTATDRVEMAAALASENAQQLGLS--LEVLESDWLAALTGRRFDLIVSNPPYIDPHD 196 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 G V ++P +L GL +TI + +HL +G+ ++E GY+Q V R+ Sbjct: 197 PHLRGDGV-SYEPLSALVAEHGGLGDLKTIVEHAPQHLCAEGVLALEHGYDQAQAVGRLL 255 Query: 240 ESRKLFLVNAFKDYGGNDRVL 260 + DYGG RV Sbjct: 256 LGAGFDDIQTHHDYGGQVRVT 276 >gi|330837037|ref|YP_004411678.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Spirochaeta coccoides DSM 17374] gi|329748940|gb|AEC02296.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Spirochaeta coccoides DSM 17374] Length = 287 Score = 252 bits (645), Expect = 3e-65, Method: Composition-based stats. Identities = 78/257 (30%), Positives = 118/257 (45%), Gaps = 5/257 (1%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 D+ LC V +S Q++ + + + + L + ILGWR+FY R Sbjct: 26 LDARLLLCAVMDVSQEQLLARWHTEVPEEASQRFAAMLSARLAATPMAYILGWREFYGRR 85 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 + PRP+TE L+++ALA+ + I D+ TG+GAV + L E P + Sbjct: 86 FHVDERVLIPRPDTETLIEAALAWIQEH--SLEAPDIADICTGSGAVGITLALELPSSRV 143 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCL 183 DIS ALE+A NA+ G + Q D V FD++VSNPPY+ + Sbjct: 144 ALTDISASALEVATENAMRLG-AGNIRLYQGDVTEPVASESFDIVVSNPPYLTPHWYSHV 202 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 +V +PR++L GG DGL+ R + G L +G +E + Q +V RI E Sbjct: 203 EAQVLK-EPRLALVGGDDGLTIIRRLVVGARSVLAPEGALFLECDWRQCDEVARIMERCG 261 Query: 244 LFLVNAFKDYGGNDRVL 260 + D G RV+ Sbjct: 262 FAQTWIYNDLAGRPRVV 278 >gi|227552472|ref|ZP_03982521.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Enterococcus faecium TX1330] gi|257888290|ref|ZP_05667943.1| modification methylase HemK [Enterococcus faecium 1,141,733] gi|257896820|ref|ZP_05676473.1| modification methylase HemK [Enterococcus faecium Com12] gi|293378551|ref|ZP_06624714.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Enterococcus faecium PC4.1] gi|227178384|gb|EEI59356.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Enterococcus faecium TX1330] gi|257824344|gb|EEV51276.1| modification methylase HemK [Enterococcus faecium 1,141,733] gi|257833385|gb|EEV59806.1| modification methylase HemK [Enterococcus faecium Com12] gi|292642880|gb|EFF61027.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Enterococcus faecium PC4.1] Length = 279 Score = 252 bits (645), Expect = 3e-65, Method: Composition-based stats. Identities = 74/255 (29%), Positives = 120/255 (47%), Gaps = 9/255 (3%) Query: 8 HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67 ++ + + + ++ + + L +LG+ DFY+ RL + Sbjct: 28 QFLFLERKQWKKLDWLLHMNEEISEEEQQLIETDLRLLLADHPPQYLLGYADFYDHRLKV 87 Query: 68 SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 + T PRPETE LV+ L + + ++D+GTGTGA+ ++L + V Sbjct: 88 TEATLIPRPETEELVEWCLDET-----PDVPLEVIDIGTGTGAIAISLKAARKNWHVSAV 142 Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLE 186 D+S +ALE+AK NA G + + V+ FDVI+SNPPYI + + Sbjct: 143 DLSEEALEVAKENAQHEGT--KISFYHGNTLEPVQDRRFDVIISNPPYISRNEWELMDES 200 Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLF 245 VR F+P+++L DGL+ Y IA L +G +EIG+ Q V +IF+ Sbjct: 201 VRSFEPKMALFAENDGLAVYEKIAVEAPSVLKPNGKIFLEIGFRQGEAVKKIFQQAFPDK 260 Query: 246 LVNAFKDYGGNDRVL 260 V KD GN+R++ Sbjct: 261 KVAIKKDLFGNERMI 275 >gi|53711799|ref|YP_097791.1| putative protoporphyrinogen oxidase [Bacteroides fragilis YCH46] gi|52214664|dbj|BAD47257.1| putative protoporphyrinogen oxidase [Bacteroides fragilis YCH46] Length = 278 Score = 252 bits (645), Expect = 3e-65, Method: Composition-based stats. Identities = 73/259 (28%), Positives = 113/259 (43%), Gaps = 8/259 (3%) Query: 8 HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67 C + G + + D L ++ L + + R K+E I I G FY + Sbjct: 26 KIICCDLLGQDAIDYYLGKDITLSANEQCDLESIVERLKKNEPIQYIQGETCFYGSMFRV 85 Query: 68 SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 + PRPETE LVD + E R+LD+GTG+G + ++L K P Sbjct: 86 APGVLIPRPETEELVDLVVK------EAATGTRLLDIGTGSGCIAISLAKHIPQAVVTAW 139 Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLE 186 D+S +AL IA N F+ + V + +D+IVSNPPY+ + + Sbjct: 140 DVSEEALAIAGENNRELKAGVHFEKMDVLSAEPVDDDQYDMIVSNPPYVTESEKNEMEPN 199 Query: 187 VRDFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245 V D++PR++L D L YR IA + L G EI +V+++ + Sbjct: 200 VLDWEPRLALFVPDNDPLRFYRRIASLGRKMLRLHGRLYFEINRAYGEEVLQMLHEQGYE 259 Query: 246 LVNAFKDYGGNDRVLLFCR 264 + KD GNDR++ R Sbjct: 260 ELRLIKDISGNDRIVTAKR 278 >gi|313631913|gb|EFR99058.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Listeria seeligeri FSL N1-067] Length = 283 Score = 252 bits (645), Expect = 3e-65, Method: Composition-based stats. Identities = 75/258 (29%), Positives = 114/258 (44%), Gaps = 10/258 (3%) Query: 7 SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66 + L GLS ++ ++ + L+ R L E + IL FY Sbjct: 25 AEILLETRMGLSRSELWMEINRELEPNHEKQFQADFERYLSGEPVQYILKTAPFYGYDFL 84 Query: 67 LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126 ++ D PRPETE LV A + ++K + +LD+ TG+G + + L K P Sbjct: 85 VTEDVLIPRPETEELV----ACAEAFLKKNPLPTVLDVCTGSGIIAITLKKAFPEVLVTA 140 Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG---LFDVIVSNPPYIESVIVDCL 183 DIS AL IAK NA+ RF +++D S + FD++++NPPYI + Sbjct: 141 SDISGPALAIAKKNALLLNADVRF--VETDLLESFKQNGERFDMVLANPPYISEAEKAEM 198 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE-SR 242 V +P ++L DGL+ Y + + LN VEIGY Q V +F+ S Sbjct: 199 SDYVLKNEPALALFAENDGLAIYERFVEDLQYVLNPSFWVGVEIGYTQGEKVKDLFQKSY 258 Query: 243 KLFLVNAFKDYGGNDRVL 260 +V KD DR + Sbjct: 259 PHSMVVIHKDINSKDRYV 276 >gi|254557154|ref|YP_003063571.1| protoporphyrinogen oxidase (putative) [Lactobacillus plantarum JDM1] gi|254046081|gb|ACT62874.1| protoporphyrinogen oxidase (putative) [Lactobacillus plantarum JDM1] Length = 288 Score = 252 bits (645), Expect = 3e-65, Method: Composition-based stats. Identities = 81/256 (31%), Positives = 122/256 (47%), Gaps = 8/256 (3%) Query: 7 SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66 + L ++ L Q+++ L I R + E + +LG FY + L Sbjct: 30 ARFLLLGLSRLDQTQLLIRYREPLPSAVWHAYQQGIDRVVAGEPVQYVLGDAPFYGLTLQ 89 Query: 67 LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126 + PR ETE LVD L + VR+LD+GTG+GA+ LA+ E P ++ Sbjct: 90 VDPAVLIPRVETEELVDWILTD----VPATAPVRLLDVGTGSGAIALAIKHERPAWEITA 145 Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGL 185 DIS AL++AK+NA + + SD +SV FD+IVSNPPYI + D + Sbjct: 146 SDISTAALQVAKANADRLHLD--VKLVHSDLLTSVSAQPFDIIVSNPPYIAASEKDVMDA 203 Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KL 244 V +P+ +L DGL+ Y +A V+ HL G +E GY+Q + +F Sbjct: 204 SVLAHEPQTALFADHDGLALYEQLATTVADHLTSTGRLYLEFGYHQGPALQTLFAQSMPD 263 Query: 245 FLVNAFKDYGGNDRVL 260 V +D G+DR+L Sbjct: 264 ATVTLRQDMAGHDRML 279 >gi|261208267|ref|ZP_05922940.1| modification methylase HemK [Enterococcus faecium TC 6] gi|289565644|ref|ZP_06446090.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Enterococcus faecium D344SRF] gi|260077524|gb|EEW65242.1| modification methylase HemK [Enterococcus faecium TC 6] gi|289162612|gb|EFD10466.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Enterococcus faecium D344SRF] Length = 290 Score = 252 bits (645), Expect = 3e-65, Method: Composition-based stats. Identities = 75/255 (29%), Positives = 120/255 (47%), Gaps = 9/255 (3%) Query: 8 HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67 ++ + + + ++ + + L +LG+ DFY+ RL + Sbjct: 39 QFLFLERKQWKKLDWLLHMNEEISEEEQRLIETDLRLLLADHPPQYLLGYADFYDHRLKV 98 Query: 68 SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 + T PRPETE LV+ L + + ++D+GTGTGA+ ++L + V Sbjct: 99 TEATLIPRPETEELVEWCLDET-----PDVPLEVIDIGTGTGAIAISLKAARRNWHVSAV 153 Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLE 186 D+S +ALE+AK NA G + D V + FDVI+SNPPYI + + Sbjct: 154 DLSEEALEVAKENAQKEGT--KISFYHGDTLGPVMDQQFDVIISNPPYISRNEWELMDES 211 Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLF 245 VR F+P+++L DGL+ Y IA L +G +EIG+ Q V +IF+ Sbjct: 212 VRSFEPKMALFAENDGLAIYEKIAVEAPSVLKPNGNIFLEIGFRQGKAVKKIFQQAFPHK 271 Query: 246 LVNAFKDYGGNDRVL 260 V KD GN+R++ Sbjct: 272 KVKIKKDLFGNERMI 286 >gi|313888255|ref|ZP_07821926.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Peptoniphilus harei ACS-146-V-Sch2b] gi|312845658|gb|EFR33048.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Peptoniphilus harei ACS-146-V-Sch2b] Length = 276 Score = 252 bits (645), Expect = 3e-65, Method: Composition-based stats. Identities = 81/258 (31%), Positives = 129/258 (50%), Gaps = 9/258 (3%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 ++ L + ++ + +LD + + + K + ILG DFY Sbjct: 25 ETRRILSDLLNKDLSYLVSHDEDLLDSKIENKYFEILEKRQKGIPLQYILGEEDFYGRTF 84 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 + PR +TE+ V L IE + +L++G GTG V +++ ES Sbjct: 85 KVIEGVLIPRQDTEISV----KKILNIIENNQINNMLEIGCGTGIVSISVDLES-SVDVT 139 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185 VDIS KA+E K N ++ + ++SD FS++ FD+I SNPPYI+S ++ L + Sbjct: 140 AVDISEKAIENTKINKEK--LNSKIKIIKSDLFSNINEKFDLIYSNPPYIKSKEIENLQV 197 Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245 EVRD++PR++LDGG DGL YR+I LN G EIGY++ D+ + + + F Sbjct: 198 EVRDYEPRLALDGGEDGLFFYRSIIKSSPEFLNHKGFLVFEIGYDEAEDICNLMKDK--F 255 Query: 246 LVNAFKDYGGNDRVLLFC 263 V +KD DRV++ Sbjct: 256 EVEVYKDLNNLDRVVVGQ 273 >gi|153007051|ref|YP_001381376.1| HemK family modification methylase [Anaeromyxobacter sp. Fw109-5] gi|152030624|gb|ABS28392.1| modification methylase, HemK family [Anaeromyxobacter sp. Fw109-5] Length = 285 Score = 252 bits (645), Expect = 3e-65, Method: Composition-based stats. Identities = 78/258 (30%), Positives = 121/258 (46%), Gaps = 11/258 (4%) Query: 7 SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66 + L R ++ +D D L D + + R + E ++G R+FY Sbjct: 28 AEVLLARALSCDRVRLYLDFDKPLGDPELAVYRELVRRRAEGEPTAYLVGKREFYGRDFA 87 Query: 67 LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126 + + PRPETELLV++ALA E R+LDL TG+GA+ + + E P + + Sbjct: 88 VDARVLVPRPETELLVEAALA------ELPRGGRLLDLCTGSGAIGVTVALERPDARVLA 141 Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCLG 184 D S AL +A+ NA G + D +++V G F+VI SNPPY+ + + L Sbjct: 142 TDASEDALAVARENASRLGAV--VELAHGDLWAAVHGDARFEVIASNPPYVPAGELAGLA 199 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 EVR +P I+LDGG DGL+ R I G L G +E+ ++ R+ Sbjct: 200 PEVRR-EPCIALDGGFDGLAVLRRIVSGAPGRLVPGGALLLEMHERHLDELPRLCLQAGF 258 Query: 245 FLVNAFKDYGGNDRVLLF 262 A +D G R+++ Sbjct: 259 ERAEARRDLAGLPRLVVA 276 >gi|257899726|ref|ZP_05679379.1| modification methylase HemK [Enterococcus faecium Com15] gi|293571481|ref|ZP_06682508.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Enterococcus faecium E980] gi|257837638|gb|EEV62712.1| modification methylase HemK [Enterococcus faecium Com15] gi|291608486|gb|EFF37781.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Enterococcus faecium E980] Length = 279 Score = 252 bits (645), Expect = 3e-65, Method: Composition-based stats. Identities = 74/255 (29%), Positives = 120/255 (47%), Gaps = 9/255 (3%) Query: 8 HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67 ++ + + + ++ + + L +LG+ DFY+ RL + Sbjct: 28 QFLFLERKQWKKLDWLLHMNEEISEEEQQLIETDLRLLLADHPPQYLLGYADFYDHRLKV 87 Query: 68 SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 + T PRPETE LV+ L + + ++D+GTGTGA+ ++L + V Sbjct: 88 TEATLIPRPETEELVEWCLDET-----PDVPLEVIDIGTGTGAIAISLKAARKNWHVSAV 142 Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLE 186 D+S +ALE+AK NA G + + V+ FDVI+SNPPYI + + Sbjct: 143 DLSEEALEVAKENAQHEGT--KISFYHGNTLEPVQDRRFDVIISNPPYISRNEWELMDES 200 Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLF 245 VR F+P+++L DGL+ Y IA L +G +EIG+ Q V +IF+ Sbjct: 201 VRSFEPKMALFAENDGLAVYEKIAVEAPSVLKPNGTIFLEIGFRQGEAVKKIFQQAFPDK 260 Query: 246 LVNAFKDYGGNDRVL 260 V KD GN+R++ Sbjct: 261 KVAIKKDLFGNERMI 275 >gi|290969300|ref|ZP_06560825.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Megasphaera genomosp. type_1 str. 28L] gi|290780806|gb|EFD93409.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Megasphaera genomosp. type_1 str. 28L] Length = 290 Score = 252 bits (645), Expect = 3e-65, Method: Composition-based stats. Identities = 91/264 (34%), Positives = 134/264 (50%), Gaps = 7/264 (2%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 D+ L V G + + L+ + I + ++ I G + F+ Sbjct: 26 PRLDAEILLAHVLGKERIYLYAHYEEPLNGEELAQYRAFIQKRADAYAVAHITGVKAFFG 85 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 +S + PRPETELLV+ + ++R+ +RILD+GTG+GA+ L+LL P Sbjct: 86 SDFLVSPEVLIPRPETELLVEYVIH----ACKQRESLRILDIGTGSGAILLSLLAHLPQA 141 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181 G GVDIS AL+IA+ N++ G+ R +SD V+G F VIVSNPPY+ + + Sbjct: 142 VGWGVDISRAALQIAEKNSIVQGLETRAVWRESDLCQQVQGERFSVIVSNPPYLTAADMA 201 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 L E+R +P +L GG DGL YR +A L GLC+VEIG Q+ V R+F + Sbjct: 202 QLQPEIRR-EPETALFGGQDGLDIYRRLAVETVPLLEPGGLCAVEIGRGQEEAVQRLFTA 260 Query: 242 RK-LFLVNAFKDYGGNDRVLLFCR 264 L + DYG R L+F + Sbjct: 261 DGDYTLQDCVWDYGRILRHLVFKK 284 >gi|187931104|ref|YP_001891088.1| modification methylase, HemK family [Francisella tularensis subsp. mediasiatica FSC147] gi|187712013|gb|ACD30310.1| modification methylase, HemK family [Francisella tularensis subsp. mediasiatica FSC147] Length = 284 Score = 252 bits (644), Expect = 4e-65, Method: Composition-based stats. Identities = 82/258 (31%), Positives = 130/258 (50%), Gaps = 6/258 (2%) Query: 4 LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63 D +C V G+ + ++ D LD + I+R L E + ILG++ F+N Sbjct: 25 KHDLQMIICDVLGVDKTYLYINSDKQLDKNTLKKIDEKILRLLAGEPLAYILGYKYFWNQ 84 Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 +L ++ DT PR +TE +V + L K ++ILDLGTGTGA+ LAL E + Sbjct: 85 KLYVTKDTLIPRADTETIVATVLDDIQ---NKDAQLKILDLGTGTGAIALALAAELANSQ 141 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDC 182 V VD+ ++L++AK NA N ++ +QS W+++++ FD+IVSNPPYI+ Sbjct: 142 VVAVDLYQQSLDVAKKNAQANNIT-NVKFIQSSWYTNLDTDKFDIIVSNPPYIDLADT-N 199 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 + V+D++P +L +GL+ R I LN G +E G+ Q + +F Sbjct: 200 IDQSVKDYEPARALFAADNGLADIRIIISQAKDFLNLGGFIYIEHGFTQADAITALFSQC 259 Query: 243 KLFLVNAFKDYGGNDRVL 260 + KD NDR Sbjct: 260 NFTDIKIVKDLNNNDRYT 277 >gi|288554406|ref|YP_003426341.1| modification methylase, HemK family protein [Bacillus pseudofirmus OF4] gi|288545566|gb|ADC49449.1| modification methylase, HemK family protein [Bacillus pseudofirmus OF4] Length = 293 Score = 252 bits (644), Expect = 4e-65, Method: Composition-based stats. Identities = 74/260 (28%), Positives = 122/260 (46%), Gaps = 7/260 (2%) Query: 7 SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66 + L ++ ++ + +D ++ + ++G+++FY R Sbjct: 32 AEWLLLHHLNINRTKMFMMFQDPIDSGVWEAFKKDVLTHSNGVPVQHLMGYQEFYGRRFQ 91 Query: 67 LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126 ++ D PRPETE L++ L + V +LD+G G+GA+ + L E K Sbjct: 92 VNGDVLIPRPETEELIEHVL-HLKQSLWGDASVDVLDVGAGSGAIGVTLALECAEMKVEA 150 Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFS---SVEGLFDVIVSNPPYIESVIVDCL 183 VDIS +ALEIA+ NA T + + +SD S +E FD+IVSNPPYI D L Sbjct: 151 VDISKEALEIARLNAET--LDAKMSFFESDLLSTPIQMEKRFDIIVSNPPYIPLGEHDEL 208 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR- 242 + VR+ +P ++L GG DG YR + + + + + GL + E+G Q V + E+ Sbjct: 209 AVHVREHEPHLALFGGEDGYELYRRLTTELPKVMKEKGLIAFEVGAGQGETVRLMLETAF 268 Query: 243 KLFLVNAFKDYGGNDRVLLF 262 D G DR++ Sbjct: 269 PNAETEVKLDINGKDRMVFA 288 >gi|255319518|ref|ZP_05360732.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Acinetobacter radioresistens SK82] gi|262378459|ref|ZP_06071616.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Acinetobacter radioresistens SH164] gi|255303458|gb|EET82661.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Acinetobacter radioresistens SK82] gi|262299744|gb|EEY87656.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Acinetobacter radioresistens SH164] Length = 274 Score = 252 bits (644), Expect = 4e-65, Method: Composition-based stats. Identities = 82/259 (31%), Positives = 125/259 (48%), Gaps = 13/259 (5%) Query: 9 SFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLS 68 L + + + D L Q+ A+ R E + ILG + F+ + L ++ Sbjct: 23 WLLEHILNIKMFEFRFRQDKELTAEQQHAYLAALARLEAGEPLAYILGSQPFWTLDLKVT 82 Query: 69 SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128 DT PRP+TE+LV++ L LP + +++DLGTGTGA+ LAL E P++ + D Sbjct: 83 RDTLVPRPDTEVLVETVLTLELP-----EETKMVDLGTGTGAIALALASEKPYWSVLATD 137 Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV----EGLFDVIVSNPPYIESVIVDCLG 184 + L +A+ NA +G+ + + WF+++ E +FD+IVSNPPYI++ Sbjct: 138 VYMPTLTVARENADKHGLQ-QVEFACGAWFAALNQLPEPMFDLIVSNPPYIDAEDRHMKD 196 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 L +P +L GL+ TI + L G +E GY Q V FE + Sbjct: 197 LAT---EPVRALVALKQGLADLETIIEQGKSWLRPKGWIVLEHGYEQAEAVRSFFEHKGF 253 Query: 245 FLVNAFKDYGGNDRVLLFC 263 V KDY GNDRV L Sbjct: 254 QSVRTVKDYNGNDRVTLGQ 272 >gi|33599374|ref|NP_886934.1| heme biosynthesis protein [Bordetella bronchiseptica RB50] gi|33566970|emb|CAE30883.1| heme biosynthesis protein [Bordetella bronchiseptica RB50] Length = 251 Score = 252 bits (644), Expect = 4e-65, Method: Composition-based stats. Identities = 75/253 (29%), Positives = 118/253 (46%), Gaps = 9/253 (3%) Query: 9 SFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLS 68 V G S ++ ++ R L E + +LG R+F L+ Sbjct: 1 MLAEHVLGRSRAWLLAHDTDPVEPAHEAAWRQLAARRLAGEPMAYLLGGREFMGHWFALT 60 Query: 69 SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128 D PRP+TELLV++AL + ++ R R+LDLGTG+GA+ +++ P + D Sbjct: 61 PDVLIPRPDTELLVETALHW----LQGRAAPRVLDLGTGSGAIAVSVALGCPQAEVTATD 116 Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIESVIVDCLGLE 186 +S AL +A+ NA G R L DW+ ++ +D+IVSNPPYI + Sbjct: 117 LSAAALAVAEGNAQRLGA--RVRCLAGDWYEALPAQDRYDLIVSNPPYIAREDAHLAQGD 174 Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246 +R F+PR +L DGL+ IA G L G +E G++Q + L Sbjct: 175 LR-FEPRGALTDENDGLAALARIAGGAPGRLLPGGAIWMEHGWDQAEAARALLRQAGLRE 233 Query: 247 VNAFKDYGGNDRV 259 V++ +D G +R+ Sbjct: 234 VHSRRDLAGIERI 246 >gi|323693925|ref|ZP_08108112.1| hypothetical protein HMPREF9475_02975 [Clostridium symbiosum WAL-14673] gi|323502022|gb|EGB17897.1| hypothetical protein HMPREF9475_02975 [Clostridium symbiosum WAL-14673] Length = 354 Score = 252 bits (644), Expect = 4e-65, Method: Composition-based stats. Identities = 85/327 (25%), Positives = 135/327 (41%), Gaps = 69/327 (21%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLD----DRQRFFLTNAIVRSLKHESIHRILGW 57 ++ D+ L G+ ++D ++ ++ + + + I ILG Sbjct: 31 ESGLDAWYLLEASFGIDQVHFLMDRTRRVNRQRLEKSYPVYRDYLEKRASRIPIQHILGN 90 Query: 58 RDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117 ++F + T+ + PR +TE LV++ L R K + +LD+ TG+G + ++L Sbjct: 91 QEFMGLEFTVDENVLIPRQDTEKLVETVL-----RDHKNQALSVLDMCTGSGCIAVSLAV 145 Query: 118 ESPFFKGVGVDISCKAL------------------------------------------- 134 + K DIS AL Sbjct: 146 LGGYDKVTAADISKAALKVAKKNVRRHFLVQKGTARSESTLISDTPWKLKMCTYVYQGGD 205 Query: 135 ----EIAKSNAVTNGVS-----------ERFDTLQSDWFSSVEG--LFDVIVSNPPYIES 177 E A + NG S + F L+SD F ++E FD+IVSNPPYI S Sbjct: 206 AQEQETAGESVSDNGYSPGIARIPGVRKKEFVLLESDLFLNLEQDEKFDIIVSNPPYIPS 265 Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237 ++D L EV+D +PR++LDG DGL YR +A R+L + G EIG +Q V + Sbjct: 266 AVIDGLEPEVKDHEPRMALDGAEDGLYFYRILAQQSGRYLKEGGFIYFEIGCDQAEAVGK 325 Query: 238 IFESRKLFLVNAFKDYGGNDRVLLFCR 264 + + + KD G DRV+ CR Sbjct: 326 LLTAAGFGEIETIKDEPGLDRVVRACR 352 >gi|270291032|ref|ZP_06197255.1| conserved hypothetical protein [Pediococcus acidilactici 7_4] gi|270280428|gb|EFA26263.1| conserved hypothetical protein [Pediococcus acidilactici 7_4] Length = 285 Score = 252 bits (644), Expect = 4e-65, Method: Composition-based stats. Identities = 73/255 (28%), Positives = 118/255 (46%), Gaps = 7/255 (2%) Query: 8 HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67 + + +++V L Q + R++ E + I +FY + Sbjct: 28 ELIMMDRMEWNRTELLVHYRQQLRLDQWQQFQKDVQRAVNGEPVQYITNKANFYGREFYV 87 Query: 68 SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 S PR ETE LV+ L + +R+LD+GTG+G + + L E P ++ V Sbjct: 88 DSRVLIPRVETEELVEHILN---AHPQLNQSLRVLDIGTGSGNIAITLKLERPDWQVTAV 144 Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLE 186 DI+ +AL +A+ NA + D Q F +V+G FD+IVSNPPYI D + Sbjct: 145 DIASEALAVAQQNA--HQQEAVVDFRQGSLFDAVKGERFDIIVSNPPYIAENERDVMDQS 202 Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLF 245 V +++P +L DGL Y+ I ++ HL G E GY+Q + + F + Sbjct: 203 VIEYEPDKALFAPDDGLFWYKQIGRQLANHLTNAGQLWCEFGYHQGAKLKQYFSELPGVK 262 Query: 246 LVNAFKDYGGNDRVL 260 V+ +D G+DR+L Sbjct: 263 DVDVLQDLSGHDRIL 277 >gi|150003436|ref|YP_001298180.1| putative protoporphyrinogen oxidase [Bacteroides vulgatus ATCC 8482] gi|254881265|ref|ZP_05253975.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA] gi|149931860|gb|ABR38558.1| putative protoporphyrinogen oxidase [Bacteroides vulgatus ATCC 8482] gi|254834058|gb|EET14367.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA] Length = 278 Score = 252 bits (644), Expect = 4e-65, Method: Composition-based stats. Identities = 79/259 (30%), Positives = 119/259 (45%), Gaps = 6/259 (2%) Query: 7 SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66 + L +V G+S ++ D+ +R L + +VR K E I I+G +FY + Sbjct: 25 AKLLLTQVFGMSVVELYAGKDTTFSVNERKQLDDILVRLQKLEPIQYIIGTEEFYGLTFE 84 Query: 67 LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126 ++ PRPET LVD + R K VRILD+GTG+G + ++L K + V Sbjct: 85 VNKHVLIPRPETGELVDWII-----REHKYGRVRILDIGTGSGCIAVSLAKNLEEAEVVS 139 Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLE 186 D+S KAL++A+ N NGV + S FDVIVSNPPYI + Sbjct: 140 WDVSEKALQVAERNCRRNGVRVILEQRDVLLASPAGERFDVIVSNPPYITEKERADMSAN 199 Query: 187 VRDFDPRISLDGGID-GLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245 V +++P ++L D L YR IA+ L G EI + V + + Sbjct: 200 VLEWEPELALFVPDDSPLLFYRKIAELGRDMLVSGGRLYFEINQEYGRETVDMLAGLEYK 259 Query: 246 LVNAFKDYGGNDRVLLFCR 264 + KD NDR++ + Sbjct: 260 NIKLRKDLFQNDRMIKAEK 278 >gi|169826580|ref|YP_001696738.1| HemK-like protein [Lysinibacillus sphaericus C3-41] gi|168991068|gb|ACA38608.1| HemK-like protein [Lysinibacillus sphaericus C3-41] Length = 285 Score = 252 bits (644), Expect = 4e-65, Method: Composition-based stats. Identities = 65/257 (25%), Positives = 116/257 (45%), Gaps = 5/257 (1%) Query: 7 SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66 + + + G S +V++ L + Q+ I + + +G +FY Sbjct: 27 ARIVMQHILGTSYSEVMLHLQDKLTEAQQVKFKALIEEHVNGRPVQYCVGSEEFYGRSFI 86 Query: 67 LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126 + PRPETE L+ + ++ + +++ D+GTG+GA+ +++ E P V Sbjct: 87 VDESVLIPRPETEELI-LGTINRMTKLFQHQALKVADIGTGSGAIAISMKLECPTLTVVA 145 Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGL 185 D+S AL A+ NA + D D + + G FD+++SNPPYI + Sbjct: 146 TDLSEAALATAQKNAQR--LEANIDFRLGDLTAPLAGEKFDIVLSNPPYIAFEEAQAMSD 203 Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KL 244 V +P +L DGL YR +A+ + ++N+ L +EIGY Q V + F+ Sbjct: 204 VVLKHEPHSALFAEEDGLILYRQLAEQLPAYMNRPALIGLEIGYTQGEKVAKFFQDSFPQ 263 Query: 245 FLVNAFKDYGGNDRVLL 261 ++ KD G R++ Sbjct: 264 ATISIEKDINGKPRMIF 280 >gi|60680030|ref|YP_210174.1| putative protoporphyrinogen oxidase [Bacteroides fragilis NCTC 9343] gi|60491464|emb|CAH06214.1| putative protoporphyrinogen oxidase [Bacteroides fragilis NCTC 9343] Length = 278 Score = 252 bits (644), Expect = 5e-65, Method: Composition-based stats. Identities = 73/259 (28%), Positives = 113/259 (43%), Gaps = 8/259 (3%) Query: 8 HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67 C + G + + D L ++ L + + R K+E I I G FY + Sbjct: 26 KIICCDLLGQDAIDYYLGKDITLSANEQCDLESIVERLKKNEPIQYIQGETCFYGSMFRV 85 Query: 68 SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 + PRPETE LVD + E R+LD+GTG+G + ++L K P Sbjct: 86 APGVLIPRPETEELVDLIVK------EAATGTRLLDIGTGSGCIAISLAKHIPQAVVTAW 139 Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLE 186 D+S +AL IA N F+ + V + +D+IVSNPPY+ + + Sbjct: 140 DVSEEALAIAGENNRELKAGVHFEKMDVLSAEPVGDDQYDMIVSNPPYVTESEKNEMEPN 199 Query: 187 VRDFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245 V D++PR++L D L YR IA + L G EI +V+++ + Sbjct: 200 VLDWEPRLALFVPDNDPLRFYRRIASLGRKMLRLHGRLYFEINRAYGEEVLQMLHEQGYE 259 Query: 246 LVNAFKDYGGNDRVLLFCR 264 + KD GNDR++ R Sbjct: 260 ELRLIKDISGNDRIVTAKR 278 >gi|69249627|ref|ZP_00605025.1| Modification methylase HemK [Enterococcus faecium DO] gi|257880057|ref|ZP_05659710.1| modification methylase HemK [Enterococcus faecium 1,230,933] gi|257882293|ref|ZP_05661946.1| modification methylase HemK [Enterococcus faecium 1,231,502] gi|257891148|ref|ZP_05670801.1| modification methylase HemK [Enterococcus faecium 1,231,410] gi|257893962|ref|ZP_05673615.1| modification methylase HemK [Enterococcus faecium 1,231,408] gi|68194106|gb|EAN08646.1| Modification methylase HemK [Enterococcus faecium DO] gi|257814285|gb|EEV43043.1| modification methylase HemK [Enterococcus faecium 1,230,933] gi|257817951|gb|EEV45279.1| modification methylase HemK [Enterococcus faecium 1,231,502] gi|257827508|gb|EEV54134.1| modification methylase HemK [Enterococcus faecium 1,231,410] gi|257830341|gb|EEV56948.1| modification methylase HemK [Enterococcus faecium 1,231,408] Length = 290 Score = 251 bits (643), Expect = 5e-65, Method: Composition-based stats. Identities = 75/255 (29%), Positives = 120/255 (47%), Gaps = 9/255 (3%) Query: 8 HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67 ++ + + + ++ + + L +LG+ DFY+ RL + Sbjct: 39 QFLFLERKQWKKLDWLLHMNEEISEEEQRLIETDLRLLLADHPPQYLLGYADFYDHRLKV 98 Query: 68 SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 + T PRPETE LV+ L + + ++D+GTGTGA+ ++L + V Sbjct: 99 TEATLIPRPETEELVEWCLDET-----PGVPLEVIDIGTGTGAIAISLKAARKNWHISAV 153 Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLE 186 D+S +ALE+AK NA G + D V + FDVI+SNPPYI + + Sbjct: 154 DLSEEALEVAKENAQKEGT--KISFYHGDTLGPVMDQQFDVIISNPPYISRNEWELMDES 211 Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLF 245 VR F+P+++L DGL+ Y IA L +G +EIG+ Q V +IF+ Sbjct: 212 VRSFEPKMALFAENDGLAIYEKIAVEAPSVLKSNGKIFLEIGFRQGEAVKKIFQQAFPDK 271 Query: 246 LVNAFKDYGGNDRVL 260 V KD GN+R++ Sbjct: 272 KVAIKKDLFGNERMI 286 >gi|299537973|ref|ZP_07051259.1| HemK-like protein [Lysinibacillus fusiformis ZC1] gi|298726555|gb|EFI67144.1| HemK-like protein [Lysinibacillus fusiformis ZC1] Length = 285 Score = 251 bits (643), Expect = 5e-65, Method: Composition-based stats. Identities = 69/257 (26%), Positives = 115/257 (44%), Gaps = 5/257 (1%) Query: 7 SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66 + + V G S +V++ L Q+ I + +G+ +FY Sbjct: 27 ARIVMQHVLGTSYGEVMLHLQDELTAAQQMKFIELIEEHANGRPVQYCVGYEEFYGRSFL 86 Query: 67 LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126 + PRPETE LV LP++ + +++ D+GTG+GA+ +++ E P + Sbjct: 87 VDESVLIPRPETEELV-LGTINRLPKLFTKQTLKLADIGTGSGAIAISMKLECPALSVIA 145 Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGL 185 D+S AL A+ NA D D + G FD+++SNPPYI + Sbjct: 146 TDLSEAALATAQKNAKRLEAD--IDFRLGDLADPLAGEKFDIVLSNPPYIAFNEAQAMSS 203 Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KL 244 V + +P +L DGL YR +A+ + ++N+ L +EIGY Q V + F+ Sbjct: 204 VVLEHEPHSALFAEEDGLMLYRKLAEQLPAYMNRPALIGLEIGYTQGEKVAKFFQDSFPQ 263 Query: 245 FLVNAFKDYGGNDRVLL 261 V+ KD G R++ Sbjct: 264 ATVSVEKDINGKPRMIF 280 >gi|91786751|ref|YP_547703.1| HemK family modification methylase [Polaromonas sp. JS666] gi|91695976|gb|ABE42805.1| [protein release factor]-glutamine N5-methyltransferase [Polaromonas sp. JS666] Length = 287 Score = 251 bits (643), Expect = 5e-65, Method: Composition-based stats. Identities = 76/263 (28%), Positives = 111/263 (42%), Gaps = 13/263 (4%) Query: 4 LRDSHSFLCRVTG---LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60 D+ L G + ++ L D + +R + E + I+G ++F Sbjct: 24 RLDAQLLLLHALGKPAIDRAWLLAHDTDQLTDEVAQRMRAFSLRRARGEPLAYIVGSKEF 83 Query: 61 YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120 + + L + + PRP+TE LV +L L + +ILDLGTG+GA+ LA+ Sbjct: 84 FGLELQVDARVLVPRPDTETLVHWSLE-VLQAPAMTERPQILDLGTGSGAIALAIAHSLQ 142 Query: 121 FF----KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE 176 + V VD S AL +A+ NA + + QS+W V G F +I SNPPYI Sbjct: 143 AAGRPARVVAVDASAGALAVARENARRLQLE--LEFSQSNWLDEVGGHFHLIASNPPYIA 200 Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236 S + +P SL G DGL R I HL G +E GY+Q V Sbjct: 201 SADPHLV---ALAHEPLGSLAAGPDGLGDIRQIVAKAPEHLAPGGWLLLEHGYDQAAAVR 257 Query: 237 RIFESRKLFLVNAFKDYGGNDRV 259 + R V + D G R Sbjct: 258 GLLRERGFAQVQSRLDLAGIARC 280 >gi|320354564|ref|YP_004195903.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Desulfobulbus propionicus DSM 2032] gi|320123066|gb|ADW18612.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Desulfobulbus propionicus DSM 2032] Length = 286 Score = 251 bits (643), Expect = 5e-65, Method: Composition-based stats. Identities = 79/266 (29%), Positives = 126/266 (47%), Gaps = 9/266 (3%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 +A D+ L +T +S V++ +D + I + + + + G ++F+ Sbjct: 21 EAALDARLLLQHLTAMSRSDVVLHGHESVDSQTVARYRQLIEQRCQRVPLQYLTGVQEFW 80 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 ++ T+S PRPETE +++ L V R LD+ TG+GA+ + L +E Sbjct: 81 SLAFTVSPAVLIPRPETEFMLEQVLTTC----AGTTVERALDMCTGSGAIAVVLARELGR 136 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVI 179 + VDIS AL +A N +GV+ L D F+++ FD+IVSNPPYI + Sbjct: 137 P-VIAVDISEAALAVAADNVRCHGVANLVTLLCGDLFAALNPARTFDLIVSNPPYIAEAV 195 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 +D L EV +PR++L GG GL IA+ L G +EIG +QK V R+F Sbjct: 196 IDQLEPEVAQAEPRLALSGGASGLESIARIAEAAQDFLCPGGWIFLEIGADQKHAVERLF 255 Query: 240 ESRK--LFLVNAFKDYGGNDRVLLFC 263 + V+ D+ RV+ Sbjct: 256 HAPGLAYREVSVIHDWADRPRVVRAR 281 >gi|19746089|ref|NP_607225.1| protoporphyrinogen oxidase [Streptococcus pyogenes MGAS8232] gi|19748261|gb|AAL97724.1| putative protoporphyrinogen oxidase [Streptococcus pyogenes MGAS8232] Length = 279 Score = 251 bits (643), Expect = 5e-65, Method: Composition-based stats. Identities = 75/246 (30%), Positives = 122/246 (49%), Gaps = 8/246 (3%) Query: 17 LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRP 76 SS +++ + + L + +H S I G F +++L + PRP Sbjct: 34 WSSLDMLIHQNQAVTPEDAVLLEHIFCSLSQHLSPQYITGNAYFRDLKLAVDKRVLIPRP 93 Query: 77 ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136 ETE LVD LA +L + +LD+GTG+GA+ ++L KE P ++ DIS AL++ Sbjct: 94 ETEELVDMILAENLDA-----PLNVLDIGTGSGAIAISLKKERPNWQVTASDISRAALDL 148 Query: 137 AKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL 196 AK NA + ++SD FS + G FD+IVSNPPYI + + L V +P ++L Sbjct: 149 AKVNADAYQLD--ITFIESDVFSLISGTFDIIVSNPPYISYEDKEEVSLNVLQSEPHLAL 206 Query: 197 DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDYGG 255 +G + YR I + +L K+G EIGY Q + + ++ + D G Sbjct: 207 FAKENGYAIYRKIIEQADNYLTKEGKLYFEIGYKQAEGIKDMLQAYFPQRHIRVVTDIFG 266 Query: 256 NDRVLL 261 +R+++ Sbjct: 267 KERMVV 272 >gi|323486284|ref|ZP_08091610.1| hypothetical protein HMPREF9474_03361 [Clostridium symbiosum WAL-14163] gi|323400394|gb|EGA92766.1| hypothetical protein HMPREF9474_03361 [Clostridium symbiosum WAL-14163] Length = 354 Score = 251 bits (643), Expect = 5e-65, Method: Composition-based stats. Identities = 84/327 (25%), Positives = 134/327 (40%), Gaps = 69/327 (21%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLD----DRQRFFLTNAIVRSLKHESIHRILGW 57 ++ D+ L G+ ++D ++ ++ + + + I ILG Sbjct: 31 ESGLDAWYLLEASFGIDQVHFLMDRTRRVNRQRLEKSYPVYRDYLEKRASRIPIQHILGN 90 Query: 58 RDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117 ++F + T+ + PR +TE LV++ L R K + +LD+ TG+G + ++L Sbjct: 91 QEFMGLEFTVDENVLIPRQDTEKLVETVL-----RDHKNQALSVLDMCTGSGCIAVSLAV 145 Query: 118 ESPFFKGVGVDISCKAL------------------------------------------- 134 + K DIS AL Sbjct: 146 LGGYDKVTAADISKAALKVAKKNVRRHFLVQKGTARSESTLISDTPWKLKMCTYVYQGGD 205 Query: 135 ----EIAKSNAVTNGVS-----------ERFDTLQSDWFSSVEG--LFDVIVSNPPYIES 177 E A + NG S + F L+SD F ++E FD+IVSNPPYI S Sbjct: 206 AQEQETAGESVSDNGYSPGIARIPGVRKKEFVLLESDLFLNLEQDEKFDIIVSNPPYIPS 265 Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237 ++D L EV+D +PR++LDG DGL YR + R+L + G EIG +Q V + Sbjct: 266 AVIDGLEPEVKDHEPRMALDGAEDGLYFYRILVQQSGRYLKEGGFIYFEIGCDQAEAVGK 325 Query: 238 IFESRKLFLVNAFKDYGGNDRVLLFCR 264 + + + KD G DRV+ CR Sbjct: 326 LLTAAGFGEIETIKDEPGLDRVVRACR 352 >gi|56808655|ref|ZP_00366380.1| COG2890: Methylase of polypeptide chain release factors [Streptococcus pyogenes M49 591] Length = 279 Score = 251 bits (643), Expect = 5e-65, Method: Composition-based stats. Identities = 75/246 (30%), Positives = 123/246 (50%), Gaps = 8/246 (3%) Query: 17 LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRP 76 SS +++ + + L + +H S I G F +++L + PRP Sbjct: 34 WSSLDMLIHQNQAVTPEDAVLLEHIFCSLSQHLSPQYITGNAYFRDLKLAVDKRVLIPRP 93 Query: 77 ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136 ETE LVD LA +L + +LD+GTG+GA+ ++L KE P ++ DIS AL++ Sbjct: 94 ETEELVDMILAENLDA-----PLNVLDIGTGSGAIAISLKKERPNWQVTASDISRAALDL 148 Query: 137 AKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL 196 AK+NA + ++SD FS + G FD+IVSNPPYI + + L V +P ++L Sbjct: 149 AKANADAYQLD--ITFIESDVFSLISGTFDIIVSNPPYISYEDKEEVSLNVLQSEPHLAL 206 Query: 197 DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDYGG 255 +G + YR I + +L K+G EIGY Q + + ++ + D G Sbjct: 207 FAKENGYAIYRKIIEQADNYLTKEGKLYFEIGYKQPEGIKDMLQAYFPQRHIRVVTDIFG 266 Query: 256 NDRVLL 261 +R+++ Sbjct: 267 KERMVV 272 >gi|241895237|ref|ZP_04782533.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Weissella paramesenteroides ATCC 33313] gi|241871543|gb|EER75294.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Weissella paramesenteroides ATCC 33313] Length = 286 Score = 251 bits (643), Expect = 5e-65, Method: Composition-based stats. Identities = 83/256 (32%), Positives = 124/256 (48%), Gaps = 6/256 (2%) Query: 9 SFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLS 68 L + + Q+ + ++VL+D +R A+ + + LG FY + Sbjct: 35 YLLTGMMDWNYAQLANNLNTVLEDEKRLRFMVAVRAIKGGQPVQYALGHAAFYGREFQVD 94 Query: 69 SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128 PR ETE LV+ LA E+ +LD+GTG+GA+ ++L E + VG D Sbjct: 95 RRVLIPRQETEELVEWVLADHPTNTEQ----HVLDMGTGSGAIAVSLSAERTSWAVVGAD 150 Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVR 188 IS +AL +AK NA S LQSD F+ V G FD+IV+NPPYI + V Sbjct: 151 ISEEALAVAKENAQLYAPS--VQLLQSDLFTGVTGSFDIIVANPPYISRNEQSLMDESVV 208 Query: 189 DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN 248 F+P I+L DGL+ Y+ +A + L G EIGY Q +V +F + +V Sbjct: 209 MFEPDIALYADDDGLALYKKMATDLLTFLKPGGAAYFEIGYQQGEKLVDLFSTLPHVIVT 268 Query: 249 AFKDYGGNDRVLLFCR 264 +D G+DR++ R Sbjct: 269 LRQDLSGHDRMIKVLR 284 >gi|270295601|ref|ZP_06201802.1| conserved hypothetical protein [Bacteroides sp. D20] gi|270274848|gb|EFA20709.1| conserved hypothetical protein [Bacteroides sp. D20] Length = 278 Score = 251 bits (643), Expect = 5e-65, Method: Composition-based stats. Identities = 77/265 (29%), Positives = 107/265 (40%), Gaps = 8/265 (3%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 +A S C + G S + D +L + L + + R E I + G F Sbjct: 20 EAANLSRIVCCEMLGQSHIDYYLGKDMILSPKDEKELESILSRLCNFEPIQYVQGTARFL 79 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 ++ PRPETE LV+ L E RILD+GTG+G + + L KE P Sbjct: 80 GRTFRVAPGVLIPRPETEELVERMLE------EVAPASRILDIGTGSGCIAVTLSKELPE 133 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIV 180 + DIS +AL IA N S +F + E FDVIVSNPPY+ Sbjct: 134 AEVTAWDISGEALAIAGDNNRLLQTSVQFVQRDVLTYQPTEDEYFDVIVSNPPYVTETEK 193 Query: 181 DCLGLEVRDFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 + V +++P +L D L YR I + L G EI V + Sbjct: 194 KDMEPNVLNWEPSGALFVPDSDPLRFYRRIGELGRSMLTVGGRLYFEINRAFGEAVASML 253 Query: 240 ESRKLFLVNAFKDYGGNDRVLLFCR 264 + V KD GNDR ++ R Sbjct: 254 RKQGYTNVRIRKDISGNDRYVIAER 278 >gi|332678839|gb|AEE87968.1| modification methylase, HemK family [Francisella cf. novicida Fx1] Length = 255 Score = 251 bits (643), Expect = 6e-65, Method: Composition-based stats. Identities = 81/253 (32%), Positives = 129/253 (50%), Gaps = 6/253 (2%) Query: 9 SFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLS 68 +C V G+ + ++ D LD + I+R L E + ILG++ F+N +L ++ Sbjct: 1 MIICDVLGVDKTYLYINSDKQLDKNTLKKIDEKILRLLAGEPLAYILGYKYFWNQKLYVT 60 Query: 69 SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128 DT PR +TE +V + L K ++ILDLGTGTGA+ LAL E + V VD Sbjct: 61 KDTLIPRADTETVVATVLDDIQ---NKDAQLKILDLGTGTGAIALALAAELANSQVVAVD 117 Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEV 187 + ++L++AK NA N ++ +QS W+++++ FD+IVSNPPYI+ + V Sbjct: 118 LYQQSLDVAKKNAQANNIT-NVKFIQSSWYTNLDTDKFDIIVSNPPYIDLADT-NIDQSV 175 Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLV 247 +D++P +L +GL+ + I LN G +E G+ Q V +F + Sbjct: 176 KDYEPARALFAADNGLADIKIIISQAKDFLNPRGFIYIEHGFTQADAVTALFSQYNFTHI 235 Query: 248 NAFKDYGGNDRVL 260 KD NDR Sbjct: 236 KTVKDLNNNDRCT 248 >gi|307708640|ref|ZP_07645103.1| HemK protein [Streptococcus mitis NCTC 12261] gi|307615214|gb|EFN94424.1| HemK protein [Streptococcus mitis NCTC 12261] Length = 278 Score = 251 bits (643), Expect = 6e-65, Method: Composition-based stats. Identities = 77/248 (31%), Positives = 117/248 (47%), Gaps = 8/248 (3%) Query: 16 GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75 LS + + + + F+ + H+ I+G DFY ++L + PR Sbjct: 33 NLSFTDFVFALQQEVTEEEEVFVKEIFQQLATHKPAQYIIGQADFYGMQLKVDERVLIPR 92 Query: 76 PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135 PETE LV+ LA + +LD+GTG+GA+ LAL K + DIS +AL Sbjct: 93 PETEELVELILAEN-----PETNFSVLDIGTGSGAIALALAKNRSAWSVTAADISQEALN 147 Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195 +A NA + +SD F+ + +D+IVSNPPYI +GL V +P ++ Sbjct: 148 LASENAKNQKL--NIFFKKSDCFAEISEKYDIIVSNPPYISREDESEVGLNVLHSEPHLA 205 Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDYG 254 L DGL+ YR IA+ + +L G +EIGY Q V +F + KD Sbjct: 206 LFADEDGLAIYRRIAEDATDYLKDGGKIYLEIGYKQGQSVPELFRKHLPEKRLRTLKDQF 265 Query: 255 GNDRVLLF 262 G DR+++ Sbjct: 266 GQDRMVVI 273 >gi|293567648|ref|ZP_06678991.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Enterococcus faecium E1071] gi|291589583|gb|EFF21388.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Enterococcus faecium E1071] Length = 279 Score = 251 bits (643), Expect = 6e-65, Method: Composition-based stats. Identities = 75/255 (29%), Positives = 120/255 (47%), Gaps = 9/255 (3%) Query: 8 HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67 ++ + + + ++ + + L +LG+ DFY+ RL + Sbjct: 28 QFLFLERKQWKKLDWLLHMNEEISEEEQRLIETDLRLLLADHPPQYLLGYADFYDHRLKV 87 Query: 68 SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 + T PRPETE LV+ L + + ++D+GTGTGA+ ++L + V Sbjct: 88 TEATLIPRPETEELVEWCLDET-----PGVPLEVIDIGTGTGAIAISLKAARKNWHVSAV 142 Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLE 186 D+S +ALE+AK NA G + D V + FDVI+SNPPYI + + Sbjct: 143 DLSEEALEVAKENAQKEGT--KISFYHGDTLGPVMDQQFDVIISNPPYISRNEWELMDES 200 Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLF 245 VR F+P+++L DGL+ Y IA L +G +EIG+ Q V +IF+ Sbjct: 201 VRSFEPKMALFAENDGLAIYEKIAVEAPSVLKSNGKIFLEIGFRQGEAVKKIFQQAFPDK 260 Query: 246 LVNAFKDYGGNDRVL 260 V KD GN+R++ Sbjct: 261 KVAIKKDLFGNERMI 275 >gi|190572887|ref|YP_001970732.1| HemK protein, putative protoporphyrinogen oxidase [Stenotrophomonas maltophilia K279a] gi|190010809|emb|CAQ44418.1| HemK protein, putative protoporphyrinogen oxidase [Stenotrophomonas maltophilia K279a] Length = 285 Score = 251 bits (643), Expect = 6e-65, Method: Composition-based stats. Identities = 82/266 (30%), Positives = 126/266 (47%), Gaps = 7/266 (2%) Query: 1 MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60 ++A ++ L V + L + + R + E + + G R F Sbjct: 23 IEARHEAELLLLHVLDRPRSWLFAHATDPLAANDQAAFEALLARRVAGEPVAYLTGRRGF 82 Query: 61 YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120 + + L + T PRPETELLV+ AL R+ +++ DLGTG+GA+ LAL E P Sbjct: 83 WTLDLEVDPATLIPRPETELLVELALE----RLPPDQSLQLADLGTGSGAIALALASERP 138 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGV-SERFDTLQSDWFSSVEG-LFDVIVSNPPYIESV 178 + + D S AL +A NA + + + RF DW++ ++G FD+I SNPPYI S Sbjct: 139 QAQVLATDASPGALAVAARNAARHDLRNVRFAEGGHDWYAPLQGARFDLIASNPPYIASD 198 Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238 ++R F+P +L G DGL R I DG HL G +E G++Q + + Sbjct: 199 DPHLERGDLR-FEPATALASGPDGLDDIRRIVDGGQAHLLPGGWLLIEHGWDQGEAIRAL 257 Query: 239 FESRKLFLVNAFKDYGGNDRVLLFCR 264 F++ V +D DR+ L R Sbjct: 258 FDAAGFAEVQTVQDLEQRDRITLGRR 283 >gi|163735802|ref|ZP_02143231.1| modification methylase, HemK family, putative [Roseobacter litoralis Och 149] gi|161390888|gb|EDQ15228.1| modification methylase, HemK family, putative [Roseobacter litoralis Och 149] Length = 277 Score = 251 bits (643), Expect = 6e-65, Method: Composition-based stats. Identities = 86/263 (32%), Positives = 138/263 (52%), Gaps = 8/263 (3%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 RD+ L + + +V + + + + + +++G R+FY Sbjct: 21 DPARDARVLLAHAAQVDAARVTLIAPEDMAADIIDRYDHLVSLRAVRVPVSQLIGSREFY 80 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 R ++ + +PRPETE L+++AL+ LDLG G+G + + LL E P Sbjct: 81 GRRFNITREVLDPRPETESLIEAALS--------APFSDALDLGVGSGCLIVTLLAERPD 132 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181 KGV +DIS A A +NAV + V++R L+SDWF +VEG FD+IVSNPPY+ + + Sbjct: 133 AKGVAIDISEAACLQASANAVLHEVADRVQVLKSDWFDAVEGRFDLIVSNPPYLAASEMS 192 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 + E+RD +PR++L DGL+ YR IA +L+ +G VE G+ Q V IFE+ Sbjct: 193 QVQPELRDHEPRLALTDEADGLTAYRVIAAEAQGYLSAEGRVLVETGWQQASSVRDIFEA 252 Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264 + ++ D GG DR++ + Sbjct: 253 QGWGELSILPDLGGRDRIVSASK 275 >gi|288956983|ref|YP_003447324.1| HemK protein [Azospirillum sp. B510] gi|288909291|dbj|BAI70780.1| HemK protein [Azospirillum sp. B510] Length = 282 Score = 251 bits (642), Expect = 6e-65, Method: Composition-based stats. Identities = 97/259 (37%), Positives = 139/259 (53%), Gaps = 3/259 (1%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 D+ L L+ I + + D+ + + R E + RILG R+F+ + Sbjct: 24 LDARYLLEHALKLTRTDFITKSEQPVPDQDAAHVLTLVERRAAREPVGRILGHREFWTID 83 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L L+ DT EPRP+TE +V++ALA R + +R++D GTGTG + LALL E P G Sbjct: 84 LVLNPDTLEPRPDTETVVEAALAAIPDR---KAPLRLIDFGTGTGCILLALLSELPNATG 140 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184 VGVD+S A++ A NA NG+++R DW + FD++VSNPPYI S + L Sbjct: 141 VGVDLSPLAVQAAAGNAERNGLADRARFQIGDWAKDIRDRFDIVVSNPPYIPSADIAALE 200 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 EVRD DP +LDGG DGL YR +A + R L GL + E+G+ Q DV + E++ + Sbjct: 201 PEVRDHDPLRALDGGPDGLEPYRILAAELPRLLLPGGLVAFEVGWGQAEDVAALVEAQGM 260 Query: 245 FLVNAFKDYGGNDRVLLFC 263 D GG R + Sbjct: 261 GETAILCDLGGVKRCVRAR 279 >gi|110680313|ref|YP_683320.1| HemK family modification methylase [Roseobacter denitrificans OCh 114] gi|109456429|gb|ABG32634.1| modification methylase, HemK family, putative [Roseobacter denitrificans OCh 114] Length = 271 Score = 251 bits (642), Expect = 6e-65, Method: Composition-based stats. Identities = 87/263 (33%), Positives = 138/263 (52%), Gaps = 8/263 (3%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 RD+ L + + +V + + + + + +++G R+FY Sbjct: 15 DPARDARILLAHAAQVDAARVTLIAPEDMASDIIERYNHLVSLRAVRVPVSQLIGGREFY 74 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 R ++ + +PRPETE L++ AL+ +LDLG G+G + + LL E P Sbjct: 75 GRRFEITREVLDPRPETESLIEVALS--------APFNTVLDLGVGSGCLIVTLLAERPD 126 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181 GV VD+S A A +NAV + V++R L+SDWF +VEG FD+IVSNPPY+ + + Sbjct: 127 ATGVAVDLSEAACLQASANAVLHEVADRVQVLKSDWFDAVEGRFDLIVSNPPYLAASEMA 186 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 + E+RD +PR++L DGL+ YR IA +L+ DG VE G+ Q DV IFE+ Sbjct: 187 QVQPELRDHEPRLALTDEADGLTAYRVIAAEAQGYLSADGRVLVETGWRQASDVRDIFEA 246 Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264 + ++ D GG DR++ + Sbjct: 247 QGWGELSILPDLGGRDRIVSASK 269 >gi|71892128|ref|YP_277860.1| N5-glutamine methyltransferase [Candidatus Blochmannia pennsylvanicus str. BPEN] gi|71796234|gb|AAZ40985.1| N5-glutamine methyltransferase [Candidatus Blochmannia pennsylvanicus str. BPEN] Length = 278 Score = 251 bits (642), Expect = 7e-65, Method: Composition-based stats. Identities = 80/261 (30%), Positives = 126/261 (48%), Gaps = 8/261 (3%) Query: 1 MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60 + RD+ L +VT S Q++ +S+L+ L + I R K E I ++G ++F Sbjct: 18 ISPKRDAEIILGQVTKKSRAQLLAFGESLLEYDTIIQLKSLIYRRKKGEPIAYLVGSKEF 77 Query: 61 YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120 +++ L +S TF PRP+TE LV + K + +LDLGTG G + LAL E P Sbjct: 78 WSLDLKVSPGTFIPRPDTECLVKHVFD-----LLKVSHLNVLDLGTGVGTIALALASERP 132 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVI 179 + G+D KAL +A N + + DWF + F++IVSNPPYI+ Sbjct: 133 NWNITGIDCQKKALFLAHKN-KLLLNFKNVKFIYGDWFKYLRNKKFNLIVSNPPYIDKND 191 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 CL F+P+ +L GL I ++HL ++G +E G+NQ + +F Sbjct: 192 -SCLQFRDMIFEPKNALVSKQKGLEDLTVICKYSTQHLRQNGWLVLEHGWNQGNYMRALF 250 Query: 240 ESRKLFLVNAFKDYGGNDRVL 260 ++ +DY +RV Sbjct: 251 FKFGFTHIHTIRDYHHYERVT 271 >gi|160871959|ref|ZP_02062091.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Rickettsiella grylli] gi|159120758|gb|EDP46096.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Rickettsiella grylli] Length = 280 Score = 251 bits (642), Expect = 7e-65, Method: Composition-based stats. Identities = 73/260 (28%), Positives = 118/260 (45%), Gaps = 9/260 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDP-DSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 A D+ V L+ Q+ P D ++ Q + + I R K E I +LG ++F+ Sbjct: 21 AYLDTELLFSEVLKLTRAQLHSQPLDRLITITQEKRIKHVIARRQKGEPIAYLLGRQEFW 80 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 + L ++ D PRPETELLV+ L + +I+DLGTG+ A+ +AL E P Sbjct: 81 SFMLEVTPDVLIPRPETELLVEVLLENF-----STEPRKIVDLGTGSAAISVALAWERPT 135 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIESVI 179 ++ + D S AL++AK N + + + W ++ FD I+SNPPY+ Sbjct: 136 WQLLATDCSMAALQVAKRNISRYHLQ-TIELRKGYWCEALNVGEKFDGILSNPPYLARND 194 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 ++P+ +L G GL I +L+ G+ +E G Q V F Sbjct: 195 PHLQSEPGLAYEPKNALISGEKGLDDLERIIIQSREYLHPGGILFLEHGAQQATLVEEFF 254 Query: 240 ESRKLFLVNAFKDYGGNDRV 259 + + +KD G+ RV Sbjct: 255 LNYGYHEIKNYKDLAGHQRV 274 >gi|83816659|ref|YP_446173.1| hemK protein [Salinibacter ruber DSM 13855] gi|294508099|ref|YP_003572157.1| protein methyltransferase [Salinibacter ruber M8] gi|83758053|gb|ABC46166.1| hemK protein [Salinibacter ruber DSM 13855] gi|294344427|emb|CBH25205.1| Protein methyltransferase [Salinibacter ruber M8] Length = 303 Score = 251 bits (642), Expect = 7e-65, Method: Composition-based stats. Identities = 81/261 (31%), Positives = 122/261 (46%), Gaps = 7/261 (2%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 R + L + + PD + + R ++ E + ILG+ FY Sbjct: 37 PRRTAEWLLAELLDCDRAHLYAHPDRTVAAAAAEQFHRMVGRRVQGEPLQHILGYASFYG 96 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 +RL +S D PRPETE +VD AL IE+ R+LD GTG+G + LAL E P Sbjct: 97 LRLRVSPDVMVPRPETETVVDRALTC----IEEVSRPRVLDAGTGSGCIALALKHERPDA 152 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFD--TLQSDWFSSVEGLFDVIVSNPPYIESVIV 180 + D+S AL +A++NA G+ RF L ++ ++ D++VSNPPYI Sbjct: 153 EVHACDVSTDALAVARANAQDLGLDVRFFEGDLCAEVPAATPRDVDLLVSNPPYIPDAEA 212 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 + L VR++DP SL G D L YR + VS G +E+ +V R+F Sbjct: 213 ESLPPVVREYDPDRSLFAGRDPLRFYRALVRWVSACCVPGGSFVLEVHAEHAAEVERLFR 272 Query: 241 -SRKLFLVNAFKDYGGNDRVL 260 + V+ +D G R++ Sbjct: 273 GEEGVGAVHTEEDLSGRPRIV 293 >gi|325694523|gb|EGD36432.1| protein-(glutamine-N5) methyltransferase [Streptococcus sanguinis SK150] Length = 276 Score = 251 bits (642), Expect = 7e-65, Method: Composition-based stats. Identities = 78/262 (29%), Positives = 122/262 (46%), Gaps = 11/262 (4%) Query: 3 ALRDSHSF--LCRVTG-LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRD 59 A ++ S + R LS ++ + ++ L L H+ I+G D Sbjct: 17 AGEEAESLSFVYRALNRLSFTDFVLKLRAEVNQEDHKQLKAIQEHLLAHKPAQYIIGSSD 76 Query: 60 FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119 F+ + L + PRPETE LV+ L+ + + +LD+GTG+GA+ LAL Sbjct: 77 FHGLTLKVDERVLIPRPETEELVELILSEN-----PESSLSVLDIGTGSGAIALALANSR 131 Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179 P ++ D+S AL +A NA + +S +QSD ++ FD+IVSNPPYI Sbjct: 132 PNWQITASDLSDDALALAAENAQSCNLS--LTFVQSDCLDAISVNFDIIVSNPPYISEAD 189 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 D +GL V +P ++L D + YR IA +L + G +EIGY Q V + Sbjct: 190 KDEVGLNVLTSEPHMALFAEEDSYAVYRKIAGQAGDYLTEKGKIYLEIGYKQGDGVRELL 249 Query: 240 ESR-KLFLVNAFKDYGGNDRVL 260 + + KD G DR++ Sbjct: 250 KKSFPQKRIRVLKDQFGKDRMV 271 >gi|292669719|ref|ZP_06603145.1| protein-(glutamine-N5) methyltransferase [Selenomonas noxia ATCC 43541] gi|292648516|gb|EFF66488.1| protein-(glutamine-N5) methyltransferase [Selenomonas noxia ATCC 43541] Length = 292 Score = 251 bits (642), Expect = 7e-65, Method: Composition-based stats. Identities = 81/264 (30%), Positives = 123/264 (46%), Gaps = 3/264 (1%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 D+ L V G + V D + R + H + +LG R+F Sbjct: 26 NPRLDAEVLLSAVLGKDRTYLYVHFDEPIASAARTLFRSYAKERGAHVPLAYLLGRREFM 85 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPR-IEKRDVVRILDLGTGTGAVCLALLKESP 120 + ++ DT PRP+TE+L A+ F R + D+GTGTGA+ L++L + Sbjct: 86 GLEFRVTRDTLIPRPDTEILAQFAVDFLRARRAAGASDLTAADIGTGTGAIALSVLHYTE 145 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVI 179 VDIS A + A+ NA G++ R + D + G +DVI+SNPPYI S Sbjct: 146 NTYADAVDISPVAADTARENAERLGLTTRIEIHVGDLLVPLAGRTYDVILSNPPYIPSAD 205 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 ++ L EVR ++PR++LDGG DGL YR + L G +VE+G D + Sbjct: 206 IEGLMPEVRGYEPRLALDGGADGLVFYRRMMAEAPSMLKNGGAIAVEVGIGAAADAAALV 265 Query: 240 ESRK-LFLVNAFKDYGGNDRVLLF 262 + + +D GG DRV++ Sbjct: 266 AAHPRIVRTEILRDLGGIDRVVVG 289 >gi|256830554|ref|YP_003159282.1| modification methylase, HemK family [Desulfomicrobium baculatum DSM 4028] gi|256579730|gb|ACU90866.1| modification methylase, HemK family [Desulfomicrobium baculatum DSM 4028] Length = 280 Score = 251 bits (642), Expect = 7e-65, Method: Composition-based stats. Identities = 75/259 (28%), Positives = 129/259 (49%), Gaps = 8/259 (3%) Query: 7 SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66 + L + G+ +++D + +D+ R + VR +K E + ++G ++FY Sbjct: 27 AQVLLAHILGMERLDMLLDVGAPVDEPCRLRMDELGVRRMKGEPVAYLVGEKEFYGFTFR 86 Query: 67 LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126 + PRPET + L L ++ +++LD+GTG+GA+ ++ P+ Sbjct: 87 VGPGVLIPRPET----ELILDHLLESLDTNARLQVLDIGTGSGALAVSCANLFPYSCVAA 142 Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGL 185 VDIS +AL++A NA+ + V +R LQ D S+ FDV+++N PY+ L Sbjct: 143 VDISFEALKVACKNALLHDVQDRIVFLQGDLLESLRIDSFDVVLANLPYVPLTTKKTLSR 202 Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245 EV +P +L G+DGL YR +A +S + L EI ++Q + V+ +F Sbjct: 203 EVLCHEPHSALFSGLDGLDCYRALARSLSGAMKPGALLLCEIDHSQGLAVIDLFSGI-AQ 261 Query: 246 LVNAFKDYGGNDR--VLLF 262 V KDY G DR +++F Sbjct: 262 NVRILKDYAGLDRLAIVVF 280 >gi|325847860|ref|ZP_08170082.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|325480878|gb|EGC83931.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 263 Score = 251 bits (642), Expect = 8e-65, Method: Composition-based stats. Identities = 80/253 (31%), Positives = 131/253 (51%), Gaps = 8/253 (3%) Query: 11 LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70 L + + + + + + L+ L + K + +G +FY + L + Sbjct: 18 LTYLLNTNKNLLYLKKEEKLEKDIEEKLLKIQDKISKGYPLQYAIGKWNFYGLDLLVDKR 77 Query: 71 TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130 PR ETE+LVD + +K +ILD+G+G+GA+ LAL K +G+DIS Sbjct: 78 ALIPRYETEILVDMIIN------DKVKKDKILDIGSGSGAISLALSYNLKNSKVLGIDIS 131 Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDF 190 A+ ++K N N + + +SD FS+VEG FD+IVSNPPYI + L + + Sbjct: 132 KDAINLSKEN-KKNLSIKNVEFKESDIFSNVEGKFDIIVSNPPYINKEDFENLDKK-LSY 189 Query: 191 DPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAF 250 +P+ +L GG DGL YR I + LNK+G +EIGY+QK ++ + + + A+ Sbjct: 190 EPQNALLGGDDGLFFYRKIILNAKKFLNKNGKIYLEIGYDQKNPIINLLKEEGYKDIRAY 249 Query: 251 KDYGGNDRVLLFC 263 KD+ DR+++ C Sbjct: 250 KDFNDFDRIIIAC 262 >gi|315223720|ref|ZP_07865570.1| protein-(glutamine-N5) methyltransferase [Capnocytophaga ochracea F0287] gi|314946295|gb|EFS98294.1| protein-(glutamine-N5) methyltransferase [Capnocytophaga ochracea F0287] Length = 281 Score = 251 bits (642), Expect = 8e-65, Method: Composition-based stats. Identities = 71/255 (27%), Positives = 122/255 (47%), Gaps = 8/255 (3%) Query: 9 SFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLS 68 L S ++ + D++L + + I + I ILG +F++ R ++ Sbjct: 29 ILLKHYGKYSKATILANSDTLLTEDIAQPILQVIRELQTAKPIQYILGETEFFSNRFFVN 88 Query: 69 SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128 + PRPETE LVD L +K + ++ILD+GTG+G + ++L K P +D Sbjct: 89 ENVLIPRPETEELVDWVLQ---EYPDKSEKIKILDVGTGSGCIAISLAKALPNAVVTAID 145 Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWF--SSVEGLFDVIVSNPPYIESVIVDCLGLE 186 +S AL++AK NA N V F LQ D ++ +D+I+SNPPY+ + + Sbjct: 146 VSEGALKVAKRNAELNNVVTHF--LQQDILRIETLPDKYDIIISNPPYVRELEKKEIRHN 203 Query: 187 VRDFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245 V +++P ++L + L Y IA + LN +G EI ++ + E + Sbjct: 204 VLEYEPHLALFVRDNNPLLFYDKIATLAQQSLNPNGSLFFEINQYLGQEMKTLLEQKHFT 263 Query: 246 LVNAFKDYGGNDRVL 260 + +D GNDR++ Sbjct: 264 EITLRQDLFGNDRMI 278 >gi|289548685|ref|YP_003473673.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Thermocrinis albus DSM 14484] gi|289182302|gb|ADC89546.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Thermocrinis albus DSM 14484] Length = 270 Score = 251 bits (642), Expect = 8e-65, Method: Composition-based stats. Identities = 78/262 (29%), Positives = 126/262 (48%), Gaps = 7/262 (2%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 + R+ H L + ++ + + D + + + + R + + +LG +FY Sbjct: 14 SKREKHLLLAHILQVTPSDLYLMEDYEVPFNEVERYISMLSRLEEGYPLQYLLGEWEFYG 73 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + PRPETELLV+ L + K ++ ++G GTG + + LL E P Sbjct: 74 RTFKVEEGVLIPRPETELLVEKILT----TVNKDRPLKGFEIGVGTGCISVTLLLEIPSL 129 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181 D++ KAL++A NA + V +R ++ F V G F ++VSNPPYI + D Sbjct: 130 VMYADDVNPKALQLAYQNACMHQVQDRLYLMEGSLFEPVRGMRFHLVVSNPPYIPEGMWD 189 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 L V+ ++ + SL GG G Y IA + L +DG+ +EIG++Q V IFE Sbjct: 190 SLPTTVK-WEGKTSLIGGPKGYEFYEKIASEIHHFLEEDGMFFLEIGHDQGSVVRDIFEE 248 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 + V FKD G DRV++ Sbjct: 249 KGFR-VEVFKDLAGQDRVVVGW 269 >gi|325479469|gb|EGC82565.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Anaerococcus prevotii ACS-065-V-Col13] Length = 264 Score = 251 bits (641), Expect = 8e-65, Method: Composition-based stats. Identities = 71/254 (27%), Positives = 116/254 (45%), Gaps = 8/254 (3%) Query: 11 LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70 L + + +I+ LD L I + K + +G +FY + + Sbjct: 18 LTYLLDTNKSNIILRSGEELDKDISTRLYEIIDKFEKGYPLQYAIGEWEFYGLNFKVDKR 77 Query: 71 TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130 PR ETE++VD + +ILD+GTG+GA+ L+L K+ + + DIS Sbjct: 78 ALIPRFETEIIVDYLIK------SDWKKDKILDIGTGSGAIALSLGKKLGKSEILASDIS 131 Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDF 190 AL++A+ N GV ++SD F + G FD+I+SNPPYI + L + Sbjct: 132 DDALDLARENKKRIGV-HNVSFIKSDIFEEISGKFDIIISNPPYINKSDYENLDKRLY-H 189 Query: 191 DPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAF 250 +P+ +L +GL Y+ I + +LN G EIGY+QK + + + Sbjct: 190 EPKSALFAEENGLYFYKKIVSEANNYLNCGGKLVFEIGYDQKQSLFELLNKFDFKNLKCI 249 Query: 251 KDYGGNDRVLLFCR 264 KDY DR ++ + Sbjct: 250 KDYNDFDRFIIAEK 263 >gi|257791637|ref|YP_003182243.1| modification methylase, HemK family [Eggerthella lenta DSM 2243] gi|257475534|gb|ACV55854.1| modification methylase, HemK family [Eggerthella lenta DSM 2243] Length = 345 Score = 251 bits (641), Expect = 9e-65, Method: Composition-based stats. Identities = 76/313 (24%), Positives = 123/313 (39%), Gaps = 55/313 (17%) Query: 7 SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66 + L TGLS ++ + + L +R L + R K E + I G F ++ + Sbjct: 30 AQWLLSEATGLSRIELYANFEQPLSMEERDVLRAYVTRRGKGEPLQYITGEVGFRHITVK 89 Query: 67 LSSDTFEPRPETELLVDSALAFSLPR---------------------------------- 92 + PRPETE+LV ALA Sbjct: 90 VRPGVLIPRPETEVLVSEALALLPAAPKRVAQHAWPEDDLPPVPWPEGEAGEQRPERTAD 149 Query: 93 -----------------IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135 + + + DL TG+G + ++ E P + V DI +A+ Sbjct: 150 QGVAEDESTPAVASGEPAPEPPELLVADLCTGSGCIACSVAYEHPLARVVATDIVPEAVA 209 Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIESVIVDCLGLEVRDFD 191 +A+ N + +R + L D V+ G FD++VSNPPY+ + ++D + EV +F+ Sbjct: 210 LARDNVAALELGDRVEVLSCDLGEGVDPTLMGAFDLVVSNPPYVPTAVMDDIPREVAEFE 269 Query: 192 PRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK 251 P ++LDGG DGL R + R L + G + E+ + R+ E V Sbjct: 270 PALALDGGADGLDVLRRLLPWCRRALKEGGGFAFELHETCLDEAARLAEEAGFSDVRVTA 329 Query: 252 DYGGNDRVLLFCR 264 D G RVL + Sbjct: 330 DLAGRPRVLTARK 342 >gi|71065791|ref|YP_264518.1| HemK family modification methylase [Psychrobacter arcticus 273-4] gi|71038776|gb|AAZ19084.1| probable modification methylase, HemK family [Psychrobacter arcticus 273-4] Length = 305 Score = 251 bits (641), Expect = 9e-65, Method: Composition-based stats. Identities = 82/284 (28%), Positives = 134/284 (47%), Gaps = 28/284 (9%) Query: 3 ALRDSHS-------FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRIL 55 A D+ +L V + +I D + L D + + + + + + Sbjct: 21 AATDAAIPQFWITDWLLYVIDKPALFLITDDNYQLSDSETERFNAGMTKMQQGTPLAYLT 80 Query: 56 GWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPR----IEKRDVVRILDLGTGTGAV 111 G + F+++ T++ T PRP+TE+LV++ L + + +R+LDLGTG+G + Sbjct: 81 GTQAFWSLDFTVNEHTLIPRPDTEVLVETVLDWIKSQPFSTTPTLKSMRLLDLGTGSGCI 140 Query: 112 CLALLKESP--------FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-- 161 ++L E ++ V VD S +AL+IA+ NAV+N V + S W+ + Sbjct: 141 AISLAHELKLADTLKQVSWQVVAVDFSLEALKIAQHNAVSNAVE--VTFVHSSWYDELPT 198 Query: 162 --EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219 E LFDVIVSNPPYI+ GL +P +L GL+ I ++L Sbjct: 199 QDEQLFDVIVSNPPYIDEADEHLAGLLA---EPISALSAPNHGLADIEHIVYYAPQYLKV 255 Query: 220 DGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFC 263 GL ++E GY+Q V ++F + KD+GGNDR+ L Sbjct: 256 GGLLAIEHGYDQGQAVRQLFADNHFDNIRTIKDFGGNDRMTLGQ 299 >gi|294615326|ref|ZP_06695201.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Enterococcus faecium E1636] gi|294617195|ref|ZP_06696847.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Enterococcus faecium E1679] gi|291591829|gb|EFF23463.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Enterococcus faecium E1636] gi|291596540|gb|EFF27781.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Enterococcus faecium E1679] Length = 279 Score = 251 bits (641), Expect = 9e-65, Method: Composition-based stats. Identities = 75/255 (29%), Positives = 120/255 (47%), Gaps = 9/255 (3%) Query: 8 HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67 ++ + + + ++ + + L +LG+ DFY+ RL + Sbjct: 28 QFLFLERKQWKKLDWLLHMNEEISEEEQRLIETDLRLLLADHPPQYLLGYADFYDHRLKV 87 Query: 68 SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 + T PRPETE LV+ L + + ++D+GTGTGA+ ++L + V Sbjct: 88 TEATLIPRPETEELVEWCLDET-----PDVPLEVIDIGTGTGAIAISLKAARRNWHVSAV 142 Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLE 186 D+S +ALE+AK NA G + D V + FDVI+SNPPYI + + Sbjct: 143 DLSEEALEVAKENAQKEGT--KISFYHGDTLGPVMDQQFDVIISNPPYISRNEWELMDES 200 Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLF 245 VR F+P+++L DGL+ Y IA L +G +EIG+ Q V +IF+ Sbjct: 201 VRSFEPKMALFAENDGLAIYEKIAVEAPSVLKPNGNIFLEIGFRQGKAVKKIFQQAFPHK 260 Query: 246 LVNAFKDYGGNDRVL 260 V KD GN+R++ Sbjct: 261 KVKIKKDLFGNERMI 275 >gi|159896800|ref|YP_001543047.1| HemK family modification methylase [Herpetosiphon aurantiacus ATCC 23779] gi|159889839|gb|ABX02919.1| modification methylase, HemK family [Herpetosiphon aurantiacus ATCC 23779] Length = 283 Score = 251 bits (641), Expect = 9e-65, Method: Composition-based stats. Identities = 74/263 (28%), Positives = 129/263 (49%), Gaps = 9/263 (3%) Query: 1 MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60 + D+ L V GL+ Q++ + L Q I R E I ++G R+F Sbjct: 22 LTPQLDARVLLGHVLGLTQTQILAAFNDQLSTEQVEQFQGLIERRSALEPIAYLIGSREF 81 Query: 61 YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120 Y + + PRP+TE+LV+ AL + ++ + + D+GTG+G + +A+ K +P Sbjct: 82 YGLMFNVDRRVLVPRPDTEILVEQALTWIKQ---QQRPLVVADIGTGSGCIAVAVTKHAP 138 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180 K VD+S AL +A+SN +G+ ++ + + D S + D+++SNPPY ++ Sbjct: 139 TIKMYAVDLSPAALAVAQSNVERHGLQQQIELIHGDGVSQLPEPIDLLLSNPPY---TLL 195 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG--LCSVEIGYNQKVDVVRI 238 D + VR +P ++LDGG DGL YR + + L + EIG Q +V+ + Sbjct: 196 DEIEPGVRLHEPTLALDGGPDGLDCYRQLLPATAAILRQGLPSAALFEIGAWQGSEVIAL 255 Query: 239 FESR-KLFLVNAFKDYGGNDRVL 260 ++ + +D DRV+ Sbjct: 256 AQASFPQAKIQLVRDLAARDRVV 278 >gi|327484700|gb|AEA79107.1| Methylase of polypeptide chain release factor [Vibrio cholerae LMA3894-4] Length = 256 Score = 251 bits (641), Expect = 9e-65, Method: Composition-based stats. Identities = 82/240 (34%), Positives = 115/240 (47%), Gaps = 9/240 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 D+ LC V ++ PD L+ L + R E + ILG R+F++ Sbjct: 24 PALDAAVLLCHVLAKPRSYLLTWPDKTLEKPTLASLELLLARRRAGEPMAYILGEREFWS 83 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +S T PRP+TE LV+ AL + +LDLGTGTGA+ LAL E P Sbjct: 84 LPLKVSPSTLIPRPDTERLVELALDKAALID-----GELLDLGTGTGAIALALASELPTR 138 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIV 180 + G+D+ +A E+A+ NA + LQ WFS + F +IVSNPPYIE Sbjct: 139 QVTGIDLRPEAAELARENATRLAI-HNAQFLQGSWFSPLADGTKFALIVSNPPYIEENDP 197 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 +VR F+P+ +L +GL+ R I+ R L G E GY+Q V V F Sbjct: 198 HLSLGDVR-FEPKSALVAAENGLADIRHISTHAPRFLLDGGWLLFEHGYDQGVAVRTDFA 256 >gi|225870518|ref|YP_002746465.1| methyltransferase [Streptococcus equi subsp. equi 4047] gi|225699922|emb|CAW93853.1| putative methyltransferase [Streptococcus equi subsp. equi 4047] Length = 282 Score = 251 bits (641), Expect = 9e-65, Method: Composition-based stats. Identities = 83/256 (32%), Positives = 123/256 (48%), Gaps = 12/256 (4%) Query: 11 LCRVTG----LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66 L V +S ++ + + + L + +H S I G F ++ L Sbjct: 24 LAYVFKELKQWTSLDFLLHQNQEVTSEDQALLERIFLALSQHVSPQYITGRAYFRDLVLA 83 Query: 67 LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126 + S PRPETE LV+ L + +LD+GTG+GA+ +AL K P ++ Sbjct: 84 VDSRVLIPRPETEELVELILKEN-----DATRKSVLDIGTGSGAIAIALKKARPNWQVTA 138 Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLE 186 DIS AL +A SNA+ + V F+ QSD FS + G FD+IVSNPPYI D +GL Sbjct: 139 SDISADALSLAYSNALDHHVEIAFE--QSDLFSKLSGQFDIIVSNPPYIAYEDKDEVGLN 196 Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLF 245 V +P ++L +G S YR I + S +L G EIGY Q + R+ R Sbjct: 197 VYQSEPHLALFAAENGFSIYRRIIEQASAYLTTSGKLYFEIGYKQGEGLKRLLSKRFPQK 256 Query: 246 LVNAFKDYGGNDRVLL 261 + KD G +R+++ Sbjct: 257 RIRVLKDMLGKERMVV 272 >gi|28378949|ref|NP_785841.1| protoporphyrinogen oxidase (putative) [Lactobacillus plantarum WCFS1] gi|300766722|ref|ZP_07076639.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308181159|ref|YP_003925287.1| protoporphyrinogen oxidase (putative) [Lactobacillus plantarum subsp. plantarum ST-III] gi|28271786|emb|CAD64692.1| protoporphyrinogen oxidase (putative) [Lactobacillus plantarum WCFS1] gi|300495822|gb|EFK30973.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308046650|gb|ADN99193.1| protoporphyrinogen oxidase (putative) [Lactobacillus plantarum subsp. plantarum ST-III] Length = 288 Score = 251 bits (641), Expect = 9e-65, Method: Composition-based stats. Identities = 80/256 (31%), Positives = 122/256 (47%), Gaps = 8/256 (3%) Query: 7 SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66 + L ++ L Q+++ L I R + E + +LG FY + L Sbjct: 30 ARFLLLGLSRLDQTQLLIRYREPLPSAVWHAYQQGIDRVVAGEPVQYVLGDAPFYGLTLQ 89 Query: 67 LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126 + PR ETE LVD L + VR+LD+GTG+GA+ LA+ E P ++ Sbjct: 90 VDPAVLIPRVETEELVDWILTD----VPATAPVRLLDVGTGSGAIALAIKHERPAWEITA 145 Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGL 185 DIS AL++AK+NA + + SD +SV FD+IVSNPPYI + D + Sbjct: 146 SDISTAALQVAKANADRLHLD--VKLVHSDLLTSVSAQPFDIIVSNPPYIAASEKDVMDA 203 Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KL 244 V +P+ +L DGL+ Y +A V+ HL G +E GY+Q + +F Sbjct: 204 SVLAHEPQTALFADHDGLALYEQLATTVADHLTSTGRLYLEFGYHQGPALQTLFAQSMPD 263 Query: 245 FLVNAFKDYGGNDRVL 260 V +D G++R+L Sbjct: 264 ATVTLRQDMAGHNRML 279 >gi|331701219|ref|YP_004398178.1| protein-(glutamine-N5) methyltransferase [Lactobacillus buchneri NRRL B-30929] gi|329128562|gb|AEB73115.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Lactobacillus buchneri NRRL B-30929] Length = 282 Score = 251 bits (641), Expect = 1e-64, Method: Composition-based stats. Identities = 78/256 (30%), Positives = 130/256 (50%), Gaps = 8/256 (3%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D L ++ +S+ +++ + + +Q +AI + LK ++G DFY + L Sbjct: 30 DVDFLLEKLFKMSAADLLIHYHTQMPVKQWRVFQDAIGQLLKGVPPQYVVGEADFYGLSL 89 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 ++ PR ETE LVD LA + +++LD+GTG+GA+ +AL P ++ Sbjct: 90 KVTPAVLIPRVETEELVDWILADN-----SDSKLKVLDIGTGSGAIAIALKHARPHWQVF 144 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185 DIS A+++A+ NA+ N + + SD F++++ FDVIVSNPPYI + Sbjct: 145 ASDISLPAIKVARQNAIANHTA--IHFMVSDVFAAIDESFDVIVSNPPYIAKDEQSYMDA 202 Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KL 244 V +P ++L GL+ Y+ IA HL G +EIG+ Q+ V IF++ Sbjct: 203 SVIKSEPDLALYAKDQGLAIYKQIAADAESHLTSKGRLYLEIGFQQQSAVTEIFQAAMPD 262 Query: 245 FLVNAFKDYGGNDRVL 260 V A D G+ R++ Sbjct: 263 AQVIAKHDVSGHQRMI 278 >gi|157694095|ref|YP_001488557.1| polypeptide chain release factor methyltransferase [Bacillus pumilus SAFR-032] gi|157682853|gb|ABV63997.1| polypeptide chain release factor methyltransferase [Bacillus pumilus SAFR-032] Length = 295 Score = 251 bits (641), Expect = 1e-64, Method: Composition-based stats. Identities = 73/266 (27%), Positives = 114/266 (42%), Gaps = 9/266 (3%) Query: 2 QALRD---SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWR 58 +A RD + L V LS +++ L D Q + + K + ++G Sbjct: 21 EAGRDQNAAELLLMHVLDLSRSELLARFHDQLPDEQDRLFREFVTQHKKGVPVQHLIGIE 80 Query: 59 DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118 FY ++ PRPETE +V +AL ++ +D+GTG+GA+ + L E Sbjct: 81 FFYGRPFEVNKHVLIPRPETEEVVLAALNLMSDIFPHDQPLKAVDVGTGSGAIAITLALE 140 Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG---LFDVIVSNPPYI 175 DIS +AL +AK N G LQ D ++ D+ +SNPPYI Sbjct: 141 KETLSVTATDISHEALAVAKRNQQALGAD--VHFLQGDLLEPIKDQGIKVDLFISNPPYI 198 Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235 + + L V +P +L G DGL Y+ + + L++ + EIG+ Q DV Sbjct: 199 AADEMGGLSEVVTKHEPVNALTDGRDGLWFYKRLVRDLHHVLHEQAVVVFEIGHKQAQDV 258 Query: 236 VR-IFESRKLFLVNAFKDYGGNDRVL 260 + +S V KD G DR + Sbjct: 259 KTLLLQSFPAADVRIVKDINGKDRAV 284 >gi|94271211|ref|ZP_01291906.1| Modification methylase HemK [delta proteobacterium MLMS-1] gi|93450531|gb|EAT01681.1| Modification methylase HemK [delta proteobacterium MLMS-1] Length = 325 Score = 250 bits (640), Expect = 1e-64, Method: Composition-based stats. Identities = 87/277 (31%), Positives = 136/277 (49%), Gaps = 15/277 (5%) Query: 2 QALRDSHSFLCRVT---------GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIH 52 +A +++ L V +++ D L Q L A R + E + Sbjct: 37 EAGQEAELLLSWVLAAGQKGHQAWDDRAGLVLAADRPLSSAQIEKLRQAAARRGRREPLA 96 Query: 53 RILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLP-RIEKRDVVRILDLGTGTGAV 111 I+G +F+++ + PRPETELLV+ AL + R + ILDLGTG+G + Sbjct: 97 YIIGEWEFWSLPFAVDPGVLIPRPETELLVEEALRLAPQLRGGAGRPLTILDLGTGSGIL 156 Query: 112 CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVI 168 + L +E + + VD S AL +A+ N + V R L +DW S++ + LFD++ Sbjct: 157 AVVLARELAPARVIAVDRSPAALAVARRNVCRHRVESRVSLLAADWLSALAAGKALFDLV 216 Query: 169 VSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228 V+NPPY+E V + L EVRD++PR +LDGG G++ R +A + L G +EIG Sbjct: 217 VANPPYVEDVALPGLEPEVRDYEPRQALDGGAAGMAQIRRLAAELPPFLRPGGGLLMEIG 276 Query: 229 YNQKVDVVRIFE-SRKLFLVNAFKDYGGNDRVLLFCR 264 ++Q+ V ++ V D G R LL CR Sbjct: 277 WDQQGVVEQLLAPDNAWREVRILPDLAGLPR-LLRCR 312 >gi|325568364|ref|ZP_08144731.1| protein-(glutamine-N5) methyltransferase [Enterococcus casseliflavus ATCC 12755] gi|325158133|gb|EGC70286.1| protein-(glutamine-N5) methyltransferase [Enterococcus casseliflavus ATCC 12755] Length = 285 Score = 250 bits (640), Expect = 1e-64, Method: Composition-based stats. Identities = 78/256 (30%), Positives = 128/256 (50%), Gaps = 8/256 (3%) Query: 8 HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67 + ++ D + + + + L+HE +LG+ +FY RL + Sbjct: 27 QYLFLQRKNWQQLDWLLQMDQPILREDEAQIAADLEQLLQHEPPQYLLGYEEFYGHRLKV 86 Query: 68 SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 + T PRPETE LV++ LA ++ +R++D+GTGTGA+ +AL P + V Sbjct: 87 TPATLIPRPETEELVENCLA----KLPADQPLRVVDIGTGTGAIAIALKLARPQWSVSAV 142 Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLE 186 D+S +AL +AK NA G RF Q D V + +D+IVSNPPYI + + + Sbjct: 143 DLSAEALAVAKENATALGAEIRF--FQGDTLEPVADQQWDLIVSNPPYISAEEWPLMDIS 200 Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLF 245 VR+ +P+++L GL+ Y+ +A + L G ++EIG+ Q V ++F + Sbjct: 201 VREKEPKMALFAQEQGLAIYKQLAQQAPKCLAPSGQMALEIGFQQGQAVQQLFAAAFPNK 260 Query: 246 LVNAFKDYGGNDRVLL 261 V KD G DR++ Sbjct: 261 EVTVVKDLAGQDRMVF 276 >gi|317478585|ref|ZP_07937742.1| protein-(glutamine-N5) methyltransferase [Bacteroides sp. 4_1_36] gi|316905226|gb|EFV27023.1| protein-(glutamine-N5) methyltransferase [Bacteroides sp. 4_1_36] Length = 278 Score = 250 bits (640), Expect = 1e-64, Method: Composition-based stats. Identities = 78/267 (29%), Positives = 110/267 (41%), Gaps = 12/267 (4%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 +A S C + G S + D +L + L + + R E I + G F Sbjct: 20 EAANLSRIVCCEMLGQSHIDYYLGKDMILSPKDEKELESILFRLCNFEPIQYVQGTARFL 79 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 ++ PRPETE LV+ L E RILD+GTG+G + + L KE P Sbjct: 80 GRTFRVAPGVLIPRPETEELVERMLE------EVAPASRILDIGTGSGCIAVTLSKELPE 133 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF---SSVEGLFDVIVSNPPYIESV 178 + DIS +AL IA N S +F +Q D + + FDVIVSNPPY+ Sbjct: 134 AEVTAWDISGEALAIAGDNNRLLQTSVQF--VQRDVLTYQPAEDEYFDVIVSNPPYVTET 191 Query: 179 IVDCLGLEVRDFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237 + V +++P +L D L YR I + L G EI V Sbjct: 192 EKKDMEPNVLNWEPSGALFVPDSDPLRFYRRIGELGRSMLTVGGRLYFEINRAFGEAVAS 251 Query: 238 IFESRKLFLVNAFKDYGGNDRVLLFCR 264 + + V KD GNDR ++ R Sbjct: 252 MLRKQGYTNVRIRKDISGNDRYVIAER 278 >gi|253564133|ref|ZP_04841590.1| conserved hypothetical protein [Bacteroides sp. 3_2_5] gi|251947909|gb|EES88191.1| conserved hypothetical protein [Bacteroides sp. 3_2_5] gi|301161571|emb|CBW21111.1| putative protoporphyrinogen oxidase [Bacteroides fragilis 638R] Length = 278 Score = 250 bits (640), Expect = 1e-64, Method: Composition-based stats. Identities = 73/259 (28%), Positives = 113/259 (43%), Gaps = 8/259 (3%) Query: 8 HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67 C + G + + D L ++ L + + R K+E I I G FY + Sbjct: 26 KIICCDLLGQDAIDYYLGKDITLSVNEQCDLESIVERLKKNEPIQYIQGETCFYGSMFRV 85 Query: 68 SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 + PRPETE LVD + E R+LD+GTG+G + ++L K P Sbjct: 86 APGVLIPRPETEELVDLIVK------EAATGTRLLDIGTGSGCIAISLAKHIPQAVVTAW 139 Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLE 186 D+S +AL IA N F+ + V + +D+IVSNPPY+ + + Sbjct: 140 DVSEEALAIAGENNRELKAGVHFEKMDVLSAEPVGDDQYDMIVSNPPYVTESEKNEMEPN 199 Query: 187 VRDFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245 V D++PR++L D L YR IA + L G EI +V+++ + Sbjct: 200 VLDWEPRLALFVPDNDPLRFYRRIASLGRKMLRLHGRLYFEINRAYGEEVLQMLHEQGYE 259 Query: 246 LVNAFKDYGGNDRVLLFCR 264 + KD GNDR++ R Sbjct: 260 ELRLIKDISGNDRIVTAKR 278 >gi|126728794|ref|ZP_01744609.1| modification methylase, HemK family protein [Sagittula stellata E-37] gi|126710724|gb|EBA09775.1| modification methylase, HemK family protein [Sagittula stellata E-37] Length = 281 Score = 250 bits (640), Expect = 1e-64, Method: Composition-based stats. Identities = 80/264 (30%), Positives = 121/264 (45%), Gaps = 11/264 (4%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 RD+ + V + ++ + +D I R + ++G R FY Sbjct: 21 DPGRDARRLMAHVLKVPPGRLTLFLPEEVDPELEVVYLTLIERRADRVPVSHLVGRRAFY 80 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 ++ + +PRPETE L++ AL+ +LDLGTG+G + L LL E Sbjct: 81 GRDFLVTPEVLDPRPETETLIEVALS--------EPFGTVLDLGTGSGCILLTLLAERDD 132 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESV 178 G G D+S AL +A N + R + + W+ ++ + LFD+IVSNPPYI Sbjct: 133 AVGYGTDVSASALNVAHWNRNALNLEGRAEFCEGSWYGALGQMDELFDLIVSNPPYIAVN 192 Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238 + L EVRD +PR++L DG + Y I G +R L G EIG Q + V ++ Sbjct: 193 EMPFLSPEVRDHEPRLALTDEADGQTAYHAILAGHARWLAPGGRLVAEIGATQGMAVSKL 252 Query: 239 FESRKLFLVNAFKDYGGNDRVLLF 262 F L V D G DRV++ Sbjct: 253 FARAGLRGVRVIPDIDGRDRVVVG 276 >gi|326800778|ref|YP_004318597.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Sphingobacterium sp. 21] gi|326551542|gb|ADZ79927.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Sphingobacterium sp. 21] Length = 286 Score = 250 bits (640), Expect = 1e-64, Method: Composition-based stats. Identities = 77/263 (29%), Positives = 120/263 (45%), Gaps = 10/263 (3%) Query: 6 DSHSF----LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 ++ S L + G S +++ L+D Q L +A R E + I+G F Sbjct: 22 EAESIFLVVLEDLLGYSRRDLLLHKSMSLNDEQLDQLEDAASRISAGEPVQYIIGHTPFM 81 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 + L ++ PRPETE LVD + ++ +++D+GTG+G + +A+ K Sbjct: 82 GLSLHVNQHVLIPRPETEELVDLIIQDL--KLSNSSESKLIDIGTGSGCIPIAIKKYVNQ 139 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESV 178 + +D+S +AL +AK NA N F D L+ D + E FDVIVSNPPYI + Sbjct: 140 AQVYALDVSVEALAVAKQNAADNQCPVHFMLADILEWDIIFAEEVKFDVIVSNPPYITNS 199 Query: 179 IVDCLGLEVRDFDPRISLDGGID-GLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237 + V F+P ++L L Y TIA HL K G EI N +V Sbjct: 200 EQKGMHPNVLQFEPHLALFVEDQAPLLFYETIAAFALAHLEKGGKLYFEINRNFGQEVKD 259 Query: 238 IFESRKLFLVNAFKDYGGNDRVL 260 + + + +D G DR++ Sbjct: 260 LLTKKGFKNILLKQDIHGADRMV 282 >gi|262382449|ref|ZP_06075586.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B] gi|298374644|ref|ZP_06984602.1| protein-(glutamine-N5) methyltransferase [Bacteroides sp. 3_1_19] gi|262295327|gb|EEY83258.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B] gi|298269012|gb|EFI10667.1| protein-(glutamine-N5) methyltransferase [Bacteroides sp. 3_1_19] Length = 318 Score = 250 bits (640), Expect = 1e-64, Method: Composition-based stats. Identities = 83/300 (27%), Positives = 124/300 (41%), Gaps = 46/300 (15%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 +A + RV GLS+HQ+++ L D ++F + + ++ I +LG DFY Sbjct: 20 EAQALVRLIMERVCGLSTHQLLLGKGKELSDTEKFKIKEIVEGLRLYKPIQYLLGIADFY 79 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 + ++ D PRPET LV+ + RILD+GTG+G + ++L K P Sbjct: 80 GMEFKVTPDVLIPRPETAELVERIITDYR-----GQAPRILDIGTGSGCIAISLAKHLPK 134 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERF-----------DTLQSDWFSSVE-------- 162 + VDIS +AL +A+ NA N VS F +Q VE Sbjct: 135 AEVAAVDISPEALAVAEENARLNQVSVSFLELDILSEGYPSFMQGKLKFHVEETKVSRKE 194 Query: 163 ---------------------GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD-GGI 200 G F+ IVSNPPYI + + V + +P ++L Sbjct: 195 NKSFTYMKPKSHTEETAVSPIGNFNCIVSNPPYIMNKEKATMEANVLENEPHLALFVPDD 254 Query: 201 DGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 D L YR IA RHL + G EI + V + V +D G DR++ Sbjct: 255 DPLLFYRAIARFGQRHLVEGGHLYFEINALCGKETVAMLRQENYTEVELIQDLYGKDRIV 314 >gi|212702186|ref|ZP_03310314.1| hypothetical protein DESPIG_00197 [Desulfovibrio piger ATCC 29098] gi|212674391|gb|EEB34874.1| hypothetical protein DESPIG_00197 [Desulfovibrio piger ATCC 29098] Length = 300 Score = 250 bits (640), Expect = 1e-64, Method: Composition-based stats. Identities = 77/264 (29%), Positives = 113/264 (42%), Gaps = 6/264 (2%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 ++ V L +++ S + D + R E + I G R+F+ Sbjct: 40 PALEARLLAGHVLHLDRIGLMLAMPSPVADDAAGAIRALTARRCAGEPLAHITGRREFFG 99 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 +S T PRPETELL++ L E VR DLGTGTG + + L E P Sbjct: 100 RDFEVSPQTLIPRPETELLLEIVLRECAGHGE----VRFADLGTGTGCIGITLALELPHS 155 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS--VEGLFDVIVSNPPYIESVIV 180 +G+ ++ S AL +A N + ++R ++ D F+ + G DV+VSNPPYI + Sbjct: 156 RGLLLEYSAGALPVAARNIRSLQAADRLALVRGDMFTPPLLPGGLDVLVSNPPYIAAAEE 215 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 D + EV +P +L DGL H + R L GL +E GY Q V R+ Sbjct: 216 DEVMAEVLHHEPHSALFSEQDGLRHLHAVIRAGQRALKPGGLIVMEHGYRQGGAVRRLLA 275 Query: 241 SRKLFLVNAFKDYGGNDRVLLFCR 264 +D G DR R Sbjct: 276 EVGYSEPRTEQDLAGLDRCTWARR 299 >gi|258614611|ref|ZP_05712381.1| hemK protein [Enterococcus faecium DO] gi|260560330|ref|ZP_05832506.1| modification methylase HemK [Enterococcus faecium C68] gi|293563061|ref|ZP_06677527.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Enterococcus faecium E1162] gi|294623634|ref|ZP_06702472.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Enterococcus faecium U0317] gi|314947686|ref|ZP_07851095.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecium TX0082] gi|260073675|gb|EEW62001.1| modification methylase HemK [Enterococcus faecium C68] gi|291596960|gb|EFF28173.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Enterococcus faecium U0317] gi|291604975|gb|EFF34443.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Enterococcus faecium E1162] gi|313645927|gb|EFS10507.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecium TX0082] Length = 279 Score = 250 bits (640), Expect = 1e-64, Method: Composition-based stats. Identities = 75/255 (29%), Positives = 120/255 (47%), Gaps = 9/255 (3%) Query: 8 HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67 ++ + + + ++ + + L +LG+ DFY+ RL + Sbjct: 28 QFLFLERKQWKKLDWLLHMNEEISEEEQRLIETDLRLLLADHPPQYLLGYADFYDHRLKV 87 Query: 68 SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 + T PRPETE LV+ L + + ++D+GTGTGA+ ++L + V Sbjct: 88 TEATLIPRPETEELVEWCLDET-----PGVPLEVIDIGTGTGAIAISLKAARKNWHISAV 142 Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLE 186 D+S +ALE+AK NA G + D V + FDVI+SNPPYI + + Sbjct: 143 DLSEEALEVAKENAQKEGT--KISFYHGDTLGPVMDQQFDVIISNPPYISRNEWELMDES 200 Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLF 245 VR F+P+++L DGL+ Y IA L +G +EIG+ Q V +IF+ Sbjct: 201 VRSFEPKMALFAENDGLAIYEKIAVEAPSVLKSNGKIFLEIGFRQGEAVKKIFQQAFPDK 260 Query: 246 LVNAFKDYGGNDRVL 260 V KD GN+R++ Sbjct: 261 KVAIKKDLFGNERMI 275 >gi|265765180|ref|ZP_06093455.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacteroides sp. 2_1_16] gi|263254564|gb|EEZ25998.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacteroides sp. 2_1_16] Length = 278 Score = 250 bits (640), Expect = 1e-64, Method: Composition-based stats. Identities = 72/259 (27%), Positives = 112/259 (43%), Gaps = 8/259 (3%) Query: 8 HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67 C + G + + D L ++ L + + R K+E I I G FY + Sbjct: 26 KIICCDLLGQDAIDYYLGKDITLSANEQCDLESIVERLKKNEPIQYIQGETCFYGSMFRV 85 Query: 68 SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 + PRPETE LVD + E R+LD+GTG+G + ++L K P Sbjct: 86 APGVLIPRPETEELVDLIVK------EAATGTRLLDIGTGSGCIAISLAKHIPQAVVTAW 139 Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLE 186 D+S +AL IA N F+ + V + +D+IVSNPPY+ + + Sbjct: 140 DVSEEALAIAGENNRELKAGVHFEKMDVLSAEPVGDDQYDMIVSNPPYVTESEKNEMEPN 199 Query: 187 VRDFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245 V D++P ++L D L YR IA + L G EI +V+++ + Sbjct: 200 VLDWEPGLALFVPDNDPLRFYRRIASLGRKMLRLHGRLYFEINRAYGEEVIQMLHEQGYE 259 Query: 246 LVNAFKDYGGNDRVLLFCR 264 + KD GNDR++ R Sbjct: 260 ELRLIKDISGNDRIVTAKR 278 >gi|150026062|ref|YP_001296888.1| methylase of polypeptide chain release factors [Flavobacterium psychrophilum JIP02/86] gi|149772603|emb|CAL44086.1| Methylase of polypeptide chain release factors [Flavobacterium psychrophilum JIP02/86] Length = 285 Score = 250 bits (640), Expect = 1e-64, Method: Composition-based stats. Identities = 75/253 (29%), Positives = 123/253 (48%), Gaps = 2/253 (0%) Query: 9 SFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLS 68 L L +++ PD LD+ Q +++ + + I ILG F+ + ++ Sbjct: 29 IILEAFHQLKRVDLVLSPDLKLDNIQLLQWETVLLQLKEQKPIQYILGETQFFGLPFYVN 88 Query: 69 SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128 +T PRPETE LV+ + +L +I ++ILD+GTG+G + ++L K P +D Sbjct: 89 ENTLIPRPETEELVEWIIKENL-KISSLKNLKILDIGTGSGCIAISLAKNLPNASVFAID 147 Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVR 188 +S KAL A+ NAV N V F + FD+IVSNPPY+ ++ + V Sbjct: 148 VSDKALATAQKNAVLNEVDITFIEKNILQTEDLNQEFDIIVSNPPYVRNLEKKEIHKNVL 207 Query: 189 DFDPRISLDG-GIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLV 247 +++P ++L D L YR I + +R+L+ +G EI + V + E Sbjct: 208 EYEPHLALFVEDNDSLLFYRKITELATRNLSNNGQLYFEINQYLGKETVELLEKYNFKNT 267 Query: 248 NAFKDYGGNDRVL 260 KD GNDR++ Sbjct: 268 TLKKDIYGNDRMI 280 >gi|254523856|ref|ZP_05135911.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Stenotrophomonas sp. SKA14] gi|219721447|gb|EED39972.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Stenotrophomonas sp. SKA14] Length = 285 Score = 250 bits (639), Expect = 1e-64, Method: Composition-based stats. Identities = 83/266 (31%), Positives = 126/266 (47%), Gaps = 7/266 (2%) Query: 1 MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60 ++A ++ L V + L + + R + E + + G R F Sbjct: 23 IEARHEAELLLLHVLERPRSWLFAHATDPLPAAELATFETLLARRVAGEPVAYLTGRRGF 82 Query: 61 YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120 + + L + T PRPETELLV+ AL R+ +++ DLGTG+GA+ LAL E P Sbjct: 83 WTLDLEVDPATLIPRPETELLVELALD----RLPLDRALQLADLGTGSGAIALALASERP 138 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSDWFSSVEG-LFDVIVSNPPYIESV 178 + + D S AL +A NA + + RF DW++ ++G FD+I SNPPYI S Sbjct: 139 QAQVLATDASPGALAVAARNAARHELHNVRFAEGGHDWYAPLQGARFDLIASNPPYIASD 198 Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238 ++R F+P +L G+DGL R I DG HL G +E G+ Q + + Sbjct: 199 DPHLQQGDLR-FEPATALASGVDGLDDIRRIVDGGQAHLLPGGWLLIEHGWGQGEAIRAL 257 Query: 239 FESRKLFLVNAFKDYGGNDRVLLFCR 264 FE+ + V +D DR+ L R Sbjct: 258 FEAARFADVQTVQDLEQRDRITLGRR 283 >gi|294777681|ref|ZP_06743132.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacteroides vulgatus PC510] gi|319640267|ref|ZP_07994992.1| protoporphyrinogen oxidase [Bacteroides sp. 3_1_40A] gi|294448749|gb|EFG17298.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacteroides vulgatus PC510] gi|317388042|gb|EFV68896.1| protoporphyrinogen oxidase [Bacteroides sp. 3_1_40A] Length = 278 Score = 250 bits (639), Expect = 1e-64, Method: Composition-based stats. Identities = 78/259 (30%), Positives = 118/259 (45%), Gaps = 6/259 (2%) Query: 7 SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66 + L +V G+S ++ D+ +R L + +VR K E I I+G +FY + Sbjct: 25 AKLLLTQVFGMSVVELYAGKDTTFSVNERKQLDDILVRLQKLEPIQYIIGTEEFYGLTFE 84 Query: 67 LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126 ++ PRPET LVD + R K VRILD+GTG+G + ++L K + V Sbjct: 85 VNKHVLIPRPETGELVDWII-----REHKYGRVRILDIGTGSGCIAVSLAKNLEEAEVVS 139 Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLE 186 D+S K L++A+ N NGV + S FDVIVSNPPYI + Sbjct: 140 WDVSEKVLQVAERNCRRNGVRVTLEQRDVLLASPAGERFDVIVSNPPYITEKERADMSAN 199 Query: 187 VRDFDPRISLDGGID-GLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245 V +++P ++L D L YR IA+ L G EI + V + + Sbjct: 200 VLEWEPELALFVPDDSPLLFYRKIAELGRDMLVSGGRLYFEINQEYGRETVDMLAGLEYK 259 Query: 246 LVNAFKDYGGNDRVLLFCR 264 + KD NDR++ + Sbjct: 260 NIELRKDLFQNDRMIKAEK 278 >gi|297183484|gb|ADI19615.1| methylase of polypeptide chain release factors [uncultured SAR11 cluster bacterium HF0770_37D02] Length = 282 Score = 250 bits (639), Expect = 1e-64, Method: Composition-based stats. Identities = 80/260 (30%), Positives = 131/260 (50%), Gaps = 5/260 (1%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 D+ L + G S ++V+ + + +AI R +K E I I G ++F++ Sbjct: 24 LDAEIILSDIMGTSKEFLMVNNQINISKKTIKKYNSAIKRRIKKEPIAYITGKKEFWSQD 83 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 ++ T PRPETELL+ + F R + +LD+GTG+G + L++LKE F G Sbjct: 84 FAVNQATLVPRPETELLIYWVINFFKNR-----KINVLDIGTGSGCILLSILKELNFSTG 138 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184 G+DIS KA++ A+ N+ V R D G +D+IVSNPPYI S + L Sbjct: 139 TGIDISAKAIKTARVNSKNLNVVYRSKFKVFDLSKFNIGKYDLIVSNPPYIPSKDIKNLS 198 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 ++ + +P ++L GG DGL + + + L ++GL ++EIGY Q V I + Sbjct: 199 KDIINHEPLVALKGGFDGLDLIKKVIYKSNYLLKRNGLLAIEIGYRQYQKVSSILKKHGF 258 Query: 245 FLVNAFKDYGGNDRVLLFCR 264 + D+ N R ++ + Sbjct: 259 REIRKEYDFNHNVRCIISTK 278 >gi|319650893|ref|ZP_08005030.1| modification methylase [Bacillus sp. 2_A_57_CT2] gi|317397491|gb|EFV78192.1| modification methylase [Bacillus sp. 2_A_57_CT2] Length = 284 Score = 250 bits (639), Expect = 1e-64, Method: Composition-based stats. Identities = 67/268 (25%), Positives = 110/268 (41%), Gaps = 9/268 (3%) Query: 2 QALRD---SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWR 58 ++ RD L ++ + + L+ A+ + + I+G Sbjct: 16 ESNRDENAGELLLQHFMKMTRASFLANLREDLNPEVLDEFQKAVQSHAAGQPVQYIIGSE 75 Query: 59 DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118 +FY ++ D PRPETE LV +AL + + + D+GTG+GA+ + + E Sbjct: 76 EFYGRAFQVNEDVLIPRPETEELVYNALQKINKLFGSVNGLEMADIGTGSGAIAVTMKLE 135 Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYI 175 P DI LE+A+ NA NG D Q D + FD+I+SNPPYI Sbjct: 136 KPELNVTATDIYGPTLELAEKNAEQNGAE--IDFYQGDLLQPLISKGKKFDIILSNPPYI 193 Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235 ++ + V + +P +L G DGL YR + + + + E+G Q V Sbjct: 194 PEKDIEWMSDIVTEHEPHRALFAGEDGLDLYRRFMEELPAVIKDRAIIGFEVGAGQSEAV 253 Query: 236 VRIFESR-KLFLVNAFKDYGGNDRVLLF 262 + + V D G DR++ Sbjct: 254 SLLLKQAFPQANVETVYDINGKDRMVFA 281 >gi|225868514|ref|YP_002744462.1| methyltransferase [Streptococcus equi subsp. zooepidemicus] gi|225701790|emb|CAW99202.1| putative methyltransferase [Streptococcus equi subsp. zooepidemicus] Length = 282 Score = 250 bits (639), Expect = 1e-64, Method: Composition-based stats. Identities = 81/256 (31%), Positives = 123/256 (48%), Gaps = 12/256 (4%) Query: 11 LCRVTG----LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66 L V +S ++ + + + L + +H S I G F ++ L Sbjct: 24 LAYVFKELKQWTSLDFLLHQNQEVTSEDQALLERIFLALSQHVSPQYITGRAYFRDLVLA 83 Query: 67 LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126 + S PRPETE LV+ L + +LD+GTG+GA+ +AL K P ++ Sbjct: 84 VDSRVLIPRPETEELVELILKEN-----DATRKSVLDIGTGSGAIAIALKKARPNWQVTA 138 Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLE 186 DIS AL +A SNA+ + V F+ +SD FS + G FD+IVSNPPYI D +GL Sbjct: 139 SDISADALSLAYSNALDHHVEIAFE--ESDLFSKLSGQFDIIVSNPPYIAYEDKDEVGLN 196 Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLF 245 V +P ++L +G + YR I + S +L G EIGY Q + R+ R Sbjct: 197 VYQSEPHLALFAAENGFAIYRRIIEQASAYLTTSGKLYFEIGYKQGEGLKRLLSKRFPQK 256 Query: 246 LVNAFKDYGGNDRVLL 261 + KD G +R+++ Sbjct: 257 RIRVLKDMLGKERMVV 272 >gi|301308352|ref|ZP_07214306.1| putative protein-(glutamine-N5) methyltransferase, release factor-specific [Bacteroides sp. 20_3] gi|300833822|gb|EFK64438.1| putative protein-(glutamine-N5) methyltransferase, release factor-specific [Bacteroides sp. 20_3] Length = 318 Score = 250 bits (639), Expect = 2e-64, Method: Composition-based stats. Identities = 83/300 (27%), Positives = 124/300 (41%), Gaps = 46/300 (15%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 +A + RV GLS+HQ+++ L D ++F + + ++ I +LG DFY Sbjct: 20 EAQALVRLIMERVCGLSTHQLLLGKGKELSDTEKFKIKEIVEGLRLYKPIQYLLGIADFY 79 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 + ++ D PRPET LV+ + RILD+GTG+G + ++L K P Sbjct: 80 GIEFKVTPDVLIPRPETAELVERIITDYR-----GQAPRILDIGTGSGCIAISLAKHLPK 134 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERF-----------DTLQSDWFSSVE-------- 162 + VDIS +AL +A+ NA N VS F +Q VE Sbjct: 135 AEVAAVDISPEALAVAEENARLNQVSVSFLELDILSEGYPSFMQGKLKFHVEETKVSRKE 194 Query: 163 ---------------------GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD-GGI 200 G F+ IVSNPPYI + + V + +P ++L Sbjct: 195 NKSFTYMKPKSHTEETAVSPIGNFNCIVSNPPYIMNKEKATMEANVLENEPHLALFVPDD 254 Query: 201 DGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 D L YR IA RHL + G EI + V + V +D G DR++ Sbjct: 255 DPLLFYRAIARFGQRHLVEGGHLYFEINALCGKETVAMLRQENYTEVELIQDLYGKDRIV 314 >gi|144897746|emb|CAM74610.1| modification methylase, HemK family [Magnetospirillum gryphiswaldense MSR-1] Length = 281 Score = 250 bits (639), Expect = 2e-64, Method: Composition-based stats. Identities = 91/262 (34%), Positives = 136/262 (51%), Gaps = 3/262 (1%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A D+ + G+ +++ P+ VL +Q+ + R + I ILG R F+ Sbjct: 23 ARLDARLLVAEALGVEPLRLVTHPEMVLTAQQQTAIEGMAARREDRQPISHILGRRGFWT 82 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L ++ DT +PRP+TE LV L R +RI+D GTG+G + LALL E P Sbjct: 83 LDLRVTPDTLDPRPDTETLVQGVLDRVADR---HAALRIVDFGTGSGCILLALLAELPNA 139 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182 G+G+D S AL +A NA NG++ R + DW ++G FD+IVSNPPYI + Sbjct: 140 HGLGIDQSAAALAVAAENAERNGLAGRAEFRHGDWGRGLDGPFDIIVSNPPYIPEADIAG 199 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 L EV +PR +L GG DGL YR +A ++R L G+ +E+G Q DV + ++ Sbjct: 200 LEPEVARHEPRSALVGGADGLDCYRALAPDIARLLAVGGITGLEVGAGQDSDVAALLKAA 259 Query: 243 KLFLVNAFKDYGGNDRVLLFCR 264 L + D G+ R + R Sbjct: 260 GLRDLCVADDLAGHGRSVFAAR 281 >gi|313899751|ref|ZP_07833254.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Clostridium sp. HGF2] gi|312955366|gb|EFR37031.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Clostridium sp. HGF2] Length = 286 Score = 250 bits (639), Expect = 2e-64, Method: Composition-based stats. Identities = 82/261 (31%), Positives = 131/261 (50%), Gaps = 12/261 (4%) Query: 7 SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66 + ++ +T +H + ++ D + I R L + +LG+ FY R T Sbjct: 25 ALLYMLELTNKEAHNLYMEFDEEMQPELEELYEEGIQRLLTGIPLGHVLGFEWFYGYRFT 84 Query: 67 LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126 ++ D PRPETE LV + LA +D V +D+GTG+GA+ ++L KE P + Sbjct: 85 VNEDVLIPRPETEELVANILAAYDEHFSSQDNVMAVDIGTGSGAIAVSLKKEEPNLHMMA 144 Query: 127 VDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183 DIS +A+ +AK NA N F D LQ ++ D+++SNPPYI + Sbjct: 145 TDISEQAVAVAKKNADDNEAIVNFMVGDMLQPLIDRNL--KVDILISNPPYIPREE--EM 200 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 V D++P ++L GG DGL YR I + ++ L + + + E+GYNQK + E++K Sbjct: 201 EHSVVDYEPHVALFGGEDGLKFYRIIFENAAKVLKERAMMAFEMGYNQKEALSE--EAKK 258 Query: 244 LF---LVNAFKDYGGNDRVLL 261 F + KD G +R+L Sbjct: 259 YFPNARIEVLKDMSGKNRMLF 279 >gi|154687815|ref|YP_001422976.1| YwkE [Bacillus amyloliquefaciens FZB42] gi|154353666|gb|ABS75745.1| YwkE [Bacillus amyloliquefaciens FZB42] Length = 286 Score = 250 bits (639), Expect = 2e-64, Method: Composition-based stats. Identities = 75/266 (28%), Positives = 117/266 (43%), Gaps = 9/266 (3%) Query: 2 QALRD---SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWR 58 +A R+ + L TG+ +++ + + + + + + I I+G Sbjct: 17 EAGREKNAAELLLLNDTGMDRSKLLASLQEAVGEDELYRFRRHVEMHKEGIPIQYIIGKE 76 Query: 59 DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118 FY ++ D PRPETE +V L + + + ++D+GTG+GA+ + L E Sbjct: 77 QFYGREFFVNDDVLIPRPETEEVVFHLLDRQKRAFSEAERLNVIDIGTGSGAIAVTLALE 136 Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYI 175 F DIS +AL++A+ NA G F LQ D + D+IVSNPPYI Sbjct: 137 CGHFSVSASDISKEALQVAERNAQNLGADVCF--LQGDLLTPFISSGKKADIIVSNPPYI 194 Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235 + L VR +P +L G DGL Y+ + + + L EIGYNQ V Sbjct: 195 SEEEMADLSDIVRFHEPLHALTDGGDGLKFYKRFMEELPLVMKDKALVVFEIGYNQGKAV 254 Query: 236 VRIFE-SRKLFLVNAFKDYGGNDRVL 260 +F S V +D G DR + Sbjct: 255 KDLFRHSFPNAEVEVVQDINGKDRTV 280 >gi|241761552|ref|ZP_04759639.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|241373860|gb|EER63393.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Zymomonas mobilis subsp. mobilis ATCC 10988] Length = 295 Score = 250 bits (639), Expect = 2e-64, Method: Composition-based stats. Identities = 85/268 (31%), Positives = 140/268 (52%), Gaps = 15/268 (5%) Query: 1 MQALRDSHSFLCRVTGLSSHQVIV----DPDSVLDDRQRFFLTNAIVRSLKHESIHRILG 56 M A D+ + G+ +++ + ++ L AI R ++E + ILG Sbjct: 39 MTARLDAELLMAHSLGIERDALLLGSWGEKEAPLS------FFEAIKRRKQNEPVAYILG 92 Query: 57 WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116 +RDF+ +RLT++ D PRP++E L+++A+A+ R + ILDLGTG+GA+ LA L Sbjct: 93 YRDFWTLRLTVTPDVLIPRPDSETLIETAIAYF--REQAFLPENILDLGTGSGALLLAAL 150 Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE 176 E KG+GVD S +A++IA+ NA G R + S W ++ FD+++ NPPYI Sbjct: 151 DEWKDAKGLGVDASTEAIKIARLNADKCGALPRVEFKISHWGRGIQQKFDLLLCNPPYIA 210 Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236 + + +V ++P ++L G +GL YR I + L + G+ +EIG++Q +V Sbjct: 211 RDAM--MPADVLHYEPHLALFSGDEGLDDYREIIPEIPSLLTERGIACLEIGFDQAENVS 268 Query: 237 RIFESRKLFLVNAFKDYGGNDRVLLFCR 264 I + L F D R +L R Sbjct: 269 MIAKETGLRS-RIFYDLEQRPRCVLLSR 295 >gi|34499039|ref|NP_903254.1| HemK protein [Chromobacterium violaceum ATCC 12472] gi|34104889|gb|AAQ61246.1| HemK protein [Chromobacterium violaceum ATCC 12472] Length = 254 Score = 250 bits (639), Expect = 2e-64, Method: Composition-based stats. Identities = 85/251 (33%), Positives = 121/251 (48%), Gaps = 9/251 (3%) Query: 16 GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75 GL+ ++ P+ L + R L E I +LG R+FY +S PR Sbjct: 9 GLTHATILGHPERELPEETASAFDALAARRLAGEPIAYLLGSREFYGRDFRVSPAVLIPR 68 Query: 76 PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135 PETE LV+ AL R+++ R +DLGTG+G + + L E+P + VD+S +AL Sbjct: 69 PETEHLVEQAL----SRVDRTMPARAVDLGTGSGIIAITLALEAPDWSLGAVDVSAEALA 124 Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPR 193 +A+ NA G R D WF ++ F++IVSNPPYIE ++R F+PR Sbjct: 125 VARGNADALGA--RVDFRLGSWFGPLDADARFELIVSNPPYIERGDHHLAEGDLR-FEPR 181 Query: 194 ISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDY 253 +L DGL+ R IA G L G VE GY+Q V +F L V D Sbjct: 182 GALTDEADGLACLREIAAGAPGRLADGGWLMVEHGYDQGEAVRGLFADAGLLEVETIVDL 241 Query: 254 GGNDRVLLFCR 264 G DR+ + + Sbjct: 242 AGQDRITIGRK 252 >gi|81428745|ref|YP_395745.1| putative protoporphyrinogen oxidase, HemK [Lactobacillus sakei subsp. sakei 23K] gi|78610387|emb|CAI55437.1| Putative protoporphyrinogen oxidase, HemK [Lactobacillus sakei subsp. sakei 23K] Length = 289 Score = 250 bits (639), Expect = 2e-64, Method: Composition-based stats. Identities = 78/256 (30%), Positives = 125/256 (48%), Gaps = 7/256 (2%) Query: 7 SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66 + L ++ Q+++ + + + + + ILG+ +FY Sbjct: 27 ARFLLLGRHHWTTTQLVLHYRDEMPTTEYEQYQADLAAFAEDQPAQYILGYANFYGRDFK 86 Query: 67 LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126 ++ T PR ETE LV+ L+ + K +++LD+GTG+GA+ + L E P ++ Sbjct: 87 VTPATLIPRLETEELVEWVLSVAPV---KDRPLKVLDVGTGSGAIAITLACERPDWQVSA 143 Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGL 185 VDIS A+ +A+ NA T G + D ++ D+ + V G FDVIVSNPPYI + Sbjct: 144 VDISPAAIAVAQQNAQTLGA--KVDFIEGDFLTPVMGQQFDVIVSNPPYIAEDERSVMDA 201 Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KL 244 V +P ++L +GL+ Y A V L DG +E GY QK +VRIFE + L Sbjct: 202 SVLKHEPDLALFAPNNGLAFYERFAQEVPAFLEPDGALFLEFGYQQKEAIVRIFEQKDPL 261 Query: 245 FLVNAFKDYGGNDRVL 260 F + KD R++ Sbjct: 262 FSLEVQKDMANWSRMM 277 >gi|332885937|gb|EGK06181.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Dysgonomonas mossii DSM 22836] Length = 296 Score = 250 bits (639), Expect = 2e-64, Method: Composition-based stats. Identities = 77/254 (30%), Positives = 123/254 (48%), Gaps = 7/254 (2%) Query: 8 HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67 + +T S Q ++ + L + Q L + + R E I I+G +F+ + + Sbjct: 43 RIIIEHITKRSYPQAVI-SGTKLTEEQTILLHSILDRLKTFEPIQYIIGETEFFGLPFHV 101 Query: 68 SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 + D PRPETE LV+ L + K+ +++LD+GTG+GA+ +AL K Sbjct: 102 TKDVLIPRPETEELVELILNEN-----KKSGLKVLDIGTGSGAIAIALAKHLEKADIEAW 156 Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEV 187 DIS +AL+IA N+ +N V+ F + + FD+IVSNPPYI + V Sbjct: 157 DISEEALKIATLNSDSNAVNIIFRNVDVLKNYPTDTKFDIIVSNPPYILEKEKSGMDQNV 216 Query: 188 RDFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246 D++P +L +GL Y IAD L +G EI + D V++ +S+ Sbjct: 217 LDYEPHTALFVPDNNGLLFYDRIADIALDLLEPNGKLYFEINQRKGEDTVQLVKSKGFIN 276 Query: 247 VNAFKDYGGNDRVL 260 V F+D NDR++ Sbjct: 277 VCLFQDLNKNDRMV 290 >gi|116618872|ref|YP_819243.1| methylase of polypeptide chain release factor [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|116097719|gb|ABJ62870.1| Methylase of polypeptide chain release factor [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 330 Score = 250 bits (638), Expect = 2e-64, Method: Composition-based stats. Identities = 76/253 (30%), Positives = 122/253 (48%), Gaps = 6/253 (2%) Query: 10 FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69 L ++ + + + + + +K++ ILG FY + Sbjct: 78 LLSGALNVNYGMLRANMSRQMPAALAALWPSWVSELVKNKPPQYILGHAPFYGREFMVDE 137 Query: 70 DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129 PRPETE LV+ L + + V +LD+GTG+GA+ L+ E+ KG DI Sbjct: 138 RVLIPRPETEQLVEWILKDA---GNTKHPVSVLDIGTGSGAIIETLMLENDRVKGFAADI 194 Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVR 188 S AL +A+ NA +S ++SD FS++ G FD+IVSNPPYI + + + V Sbjct: 195 SQDALTVAEMNAQRFNLSH-LHFVESDVFSALSGLKFDLIVSNPPYISNSDENEMDDSVL 253 Query: 189 DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLV 247 F+P +L DGL+ Y+ IA G+ HL + G EIGY Q V ++ ++ + Sbjct: 254 TFEPHTALFAENDGLAIYKKIARGLDAHLTEHGRAYFEIGYKQGKAVQQLLQAALPKAKI 313 Query: 248 NAFKDYGGNDRVL 260 +D+ G DR++ Sbjct: 314 TLRQDFSGLDRMI 326 >gi|241889800|ref|ZP_04777098.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Gemella haemolysans ATCC 10379] gi|241863422|gb|EER67806.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Gemella haemolysans ATCC 10379] Length = 280 Score = 250 bits (638), Expect = 2e-64, Method: Composition-based stats. Identities = 69/262 (26%), Positives = 130/262 (49%), Gaps = 10/262 (3%) Query: 7 SHSFLCRVTGLSSHQVIVDP-DSVLDDRQRFFLTNAIVRSLKHE-SIHRILGWRDFYNVR 64 + L + S Q+ + + + I + +K + + ++G+ FY+ + Sbjct: 24 ARFLLMYILDESP-QLFSNSLSEQISKENEEKYFSLIEKHIKEDVPLSHLVGFEYFYDRK 82 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 ++ D PR ETE L+ + + ++ +ILDL TG+G + + L KE Sbjct: 83 YKVTKDVLSPRMETEELIYKVIEYI--NTSNKNKFKILDLCTGSGIIAITLKKELEQVSV 140 Query: 125 --VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182 + DIS +A+E+AK N+ ++ ++SD F++++ FD+IVSNPPYI+ Sbjct: 141 DVIASDISKEAIEVAKENSQSH--DATIKFIKSDIFNNIDDKFDIIVSNPPYIDRKDKVT 198 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 + V +DP ++L +G+ YR I + + +LN++G+ EIGY+QK ++++ + Sbjct: 199 MQDNVLKYDPHLALFAEEEGMYFYRKIIEQANDYLNENGVIFFEIGYDQKDKIIKLADMN 258 Query: 243 KLFLVNAFKDYGGNDRVLLFCR 264 +KD G DR+ R Sbjct: 259 GYS-AEVYKDINGRDRMAFLVR 279 >gi|332637163|ref|ZP_08416026.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Weissella cibaria KACC 11862] Length = 287 Score = 250 bits (638), Expect = 2e-64, Method: Composition-based stats. Identities = 74/256 (28%), Positives = 125/256 (48%), Gaps = 5/256 (1%) Query: 9 SFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLS 68 L + + Q+ + ++VL+D +R A+ + + LG FY + Sbjct: 35 YLLTGMMDWNYAQLANNLNTVLEDEKRLRFMVAVRAIKGGQPVQYALGHAAFYGREFNVD 94 Query: 69 SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128 PR ETE LV+ L V R+LD+GTG+GA+ + + E P + G D Sbjct: 95 RRVLIPRQETEELVEWVLN---DHKVTGPVQRVLDIGTGSGAIAVTIGAERPTWDVTGAD 151 Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVR 188 IS AL +A++NA +++ + ++SD FS G +D+I+SNPPYI D + V Sbjct: 152 ISADALVVAQTNAD--QFAKQVNFIESDLFSQATGQYDIIISNPPYISEAERDVMDESVI 209 Query: 189 DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN 248 ++P ++L +GL+ Y+ +A + +L +G EIGY Q ++ +F V Sbjct: 210 MYEPDLALFADDEGLALYKQMAAQLLTYLAPNGTAYFEIGYQQGPALLAVFGELPGVSVA 269 Query: 249 AFKDYGGNDRVLLFCR 264 +D G+DR++ R Sbjct: 270 LRQDMSGHDRMIKVSR 285 >gi|195978152|ref|YP_002123396.1| methylase of polypeptide chain release factors [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|195974857|gb|ACG62383.1| methylase of polypeptide chain release factors [Streptococcus equi subsp. zooepidemicus MGCS10565] Length = 282 Score = 250 bits (638), Expect = 2e-64, Method: Composition-based stats. Identities = 81/256 (31%), Positives = 123/256 (48%), Gaps = 12/256 (4%) Query: 11 LCRVTG----LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66 L V +S ++ + + + L + +H S I G F ++ L Sbjct: 24 LAYVFKELKQWTSLDFLLHQNQEVTSEDQALLERIFLALSQHVSPQYITGRAYFRDLVLA 83 Query: 67 LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126 + S PRPETE LV+ L + +LD+GTG+GA+ +AL K P ++ Sbjct: 84 VDSRVLIPRPETEELVELILKEN-----DATRKSVLDIGTGSGAIAIALKKARPNWQVTA 138 Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLE 186 DIS AL +A SNA+ + V F+ +SD FS + G FD+IVSNPPYI D +GL Sbjct: 139 SDISADALSLAYSNALDHHVEIAFE--ESDLFSKLSGQFDIIVSNPPYIAYEDKDEVGLN 196 Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLF 245 V +P ++L +G + YR I + S +L G EIGY Q + R+ R Sbjct: 197 VYQSEPHLALFAAENGFAIYRRIIEQASAYLTTSGKLYFEIGYKQGEGLKRLLSKRFPQK 256 Query: 246 LVNAFKDYGGNDRVLL 261 + KD G +R+++ Sbjct: 257 RIRVLKDMLGKERMVV 272 >gi|312887827|ref|ZP_07747414.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Mucilaginibacter paludis DSM 18603] gi|311299646|gb|EFQ76728.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Mucilaginibacter paludis DSM 18603] Length = 290 Score = 249 bits (637), Expect = 2e-64, Method: Composition-based stats. Identities = 77/258 (29%), Positives = 123/258 (47%), Gaps = 9/258 (3%) Query: 11 LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70 + VTGLS Q+ + + Q LT+ + + ILG +FY + ++ Sbjct: 37 VSDVTGLSKAQLRAFTGNEITTPQAEKLTDIANQLQTGIPLQYILGHTEFYGLNFQVNPS 96 Query: 71 TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130 PRPETE LV+ + + R ++ ILD+GTG+G + + L K P + +DIS Sbjct: 97 VLIPRPETEELVEWIIQAAQERHQQEA---ILDIGTGSGCIPVKLKKHLPDAEVSAIDIS 153 Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVI---VSNPPYIESVIVDCLGLEV 187 AL+ AK NA NGV +++D + VE F VSNPPY+ + + V Sbjct: 154 PAALQTAKQNATLNGVD--VAFIEADILNPVEISFPQYSILVSNPPYVTEREKAHMHVNV 211 Query: 188 RDFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246 + +P ++L D L YR IAD +HL +GL EI N ++ + + + L Sbjct: 212 LNNEPHLALFVSDHDPLVFYRAIADFALQHLTSNGLLFFEINENLGQQMIDLLQDKNLKN 271 Query: 247 VNAFKDYGGNDRVLLFCR 264 + +D G DR++ + Sbjct: 272 IELRQDMRGKDRMIKAQK 289 >gi|313903649|ref|ZP_07837039.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Thermaerobacter subterraneus DSM 13965] gi|313466202|gb|EFR61726.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Thermaerobacter subterraneus DSM 13965] Length = 331 Score = 249 bits (637), Expect = 2e-64, Method: Composition-based stats. Identities = 71/264 (26%), Positives = 118/264 (44%), Gaps = 10/264 (3%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 +A + L + +++ +P++ L ++R + E + IL +F+ Sbjct: 67 EARASARVLLGAAMDMPGARLLAEPEAPLPPAAWARFVQWVLRRARREPVAYILQRAEFF 126 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 ++ T PRPETE+LV++ L P + + DLGTGTG V + L E P Sbjct: 127 GRPFRVTPATLIPRPETEVLVEAVLRTLSP-----EPAVVADLGTGTGIVGVTLAAERPL 181 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-----EGLFDVIVSNPPYIE 176 + + D S +AL++A+ NA +GV+ R DW + G + SNPPY+ Sbjct: 182 WTVLVTDCSARALKVARDNAARHGVAARMQFWAGDWAEPLLAGGWAGKLAAVASNPPYVA 241 Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236 S + L EV ++P ++L G GL Y + G R L G +E+G Q V Sbjct: 242 SGDLRQLQAEVYRYEPHLALCPGPTGLEAYHRLIPGAVRLLAPGGWIFLEVGAGQAAAVR 301 Query: 237 RIFESRKLFLVNAFKDYGGNDRVL 260 + + + + D G RV+ Sbjct: 302 HLLGAVGCRNLCQWPDLAGIPRVV 325 >gi|326692969|ref|ZP_08229974.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Leuconostoc argentinum KCTC 3773] Length = 335 Score = 249 bits (637), Expect = 2e-64, Method: Composition-based stats. Identities = 79/253 (31%), Positives = 121/253 (47%), Gaps = 5/253 (1%) Query: 10 FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69 L ++ + + + + + +++ ILG FY + Sbjct: 81 LLTGALDINYGYLRANLSRQMPAALAAVWPKWVAQLTQNKPPQYILGHAPFYGREFMVDE 140 Query: 70 DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129 PRPETE LV+ L + + + V +LD+GTG+GA+ L+ E+P KG DI Sbjct: 141 RVLIPRPETEQLVEWILQDA--SGTQGEPVSVLDIGTGSGAIIETLMLENPRVKGFAADI 198 Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVR 188 S AL +A+SNA G+ + ++SD F V FD+IVSNPPYI + V Sbjct: 199 SPDALAVAESNAQRFGLY-QLHFVESDVFQGVADLTFDIIVSNPPYIARTDEAEMDASVL 257 Query: 189 DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLV 247 F+P+++L DGL+ Y IA G+++HL G EIGY Q VV + + V Sbjct: 258 AFEPQLALFADQDGLAIYAKIAAGLAQHLTAQGRAYFEIGYKQGPAVVAMMQQALPDATV 317 Query: 248 NAFKDYGGNDRVL 260 KD+ G DR++ Sbjct: 318 TLKKDFAGLDRMV 330 >gi|319761652|ref|YP_004125589.1| protein-(glutamine-n5) methyltransferase, release factor-specific [Alicycliphilus denitrificans BC] gi|317116213|gb|ADU98701.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Alicycliphilus denitrificans BC] Length = 281 Score = 249 bits (637), Expect = 3e-64, Method: Composition-based stats. Identities = 79/261 (30%), Positives = 115/261 (44%), Gaps = 12/261 (4%) Query: 3 ALRDSHSFLCRVTGL---SSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRD 59 A D+ L G ++ LD R E + + G ++ Sbjct: 20 ARIDAQMLLLHALGRPTGDRAWLLAHDTDPLDAPALARYQALCARRAAGEPVAYLTGSKE 79 Query: 60 FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119 FY + L + + +PRP+TE+LVD AL P R+ DLGTG+GA+ LAL Sbjct: 80 FYGLPLRVDARVLDPRPDTEILVDWALELLAPL----PAPRVADLGTGSGAIALALQHAR 135 Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179 P + + +D S AL +A++NA G+ RF +Q+DW + + G FD IVSNPPYI + Sbjct: 136 PDARVLAMDASAGALAVARANAERLGLPVRF--VQADWLAGIAGPFDAIVSNPPYIPAQD 193 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 +P +L G DGL R IA L G +E G++Q V + Sbjct: 194 PHL---AALAHEPLSALASGADGLDDIRAIAAQAPALLAPGGWLLLEHGWDQAGAVQALL 250 Query: 240 ESRKLFLVNAFKDYGGNDRVL 260 + L V + D G R Sbjct: 251 RASGLARVQSRDDLAGIARCT 271 >gi|160916054|ref|ZP_02078261.1| hypothetical protein EUBDOL_02081 [Eubacterium dolichum DSM 3991] gi|158431778|gb|EDP10067.1| hypothetical protein EUBDOL_02081 [Eubacterium dolichum DSM 3991] Length = 284 Score = 249 bits (637), Expect = 3e-64, Method: Composition-based stats. Identities = 84/262 (32%), Positives = 128/262 (48%), Gaps = 12/262 (4%) Query: 7 SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66 + +L +T +H + ++ D + Q + R ++ E + +LG+ FY R Sbjct: 25 AFLYLLELTNKEAHNLYMEYDEEMPQAQIDEFEAGVERLVEGEPLGHVLGFEWFYGYRFK 84 Query: 67 LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126 ++ D PRPETE LV LA + V +D+GTG+GA+ +AL KE P + Sbjct: 85 VNEDVLIPRPETEELVAYILAAYDEYFKDTLNVTAVDVGTGSGAIAVALKKEEPNIHILA 144 Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIVDCL 183 DIS KA IAK NA N V + L D + D+++SNPPYI S + Sbjct: 145 SDISEKACRIAKQNAQDNDVV--VEVLCGDMLEPLIERNIKVDILISNPPYIPSDE--AM 200 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 V +++P ++L GG DGL YR I + + L + + E+GYNQK + E+RK Sbjct: 201 EDSVVNYEPHVALFGGEDGLKFYRIIFEHAKKVLKDKAMMAFEMGYNQKEALSA--EARK 258 Query: 244 LF---LVNAFKDYGGNDRVLLF 262 F + KD G +R+L Sbjct: 259 YFPDAKIEVIKDMSGKNRMLFI 280 >gi|269121055|ref|YP_003309232.1| modification methylase, HemK family [Sebaldella termitidis ATCC 33386] gi|268614933|gb|ACZ09301.1| modification methylase, HemK family [Sebaldella termitidis ATCC 33386] Length = 361 Score = 249 bits (637), Expect = 3e-64, Method: Composition-based stats. Identities = 71/259 (27%), Positives = 115/259 (44%), Gaps = 7/259 (2%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHE-SIHRILGWRDF 60 +A V + + ++ ++ + N + K + + +L +F Sbjct: 98 EARLTVELIFSHVLSIDRMMLFTKYTMQPEEEKKNKIRNLLKLRAKDKIPLQYLLNEEEF 157 Query: 61 YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120 Y ++ PR ETE++V+ AL ++ ILD+G G+G + + + KE P Sbjct: 158 YGRPFYINKGVLIPRNETEIVVERAL----QELKDTAAPNILDIGAGSGVISITIAKEKP 213 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVI 179 K +G+DIS ALEIA N ++ L+S+ F V FD+I+SNPPYI Sbjct: 214 DSKILGIDISDNALEIANKN-KGLLKADNVKFLKSNLFQEVNYHSFDMIISNPPYIPKSE 272 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 + L +VR +P +L +GL Y I+ S +L G E GYNQ + I Sbjct: 273 YETLSDDVRMHEPEEALTAENEGLFFYYEISKNASDYLKNGGRLIFECGYNQAEIIESIM 332 Query: 240 ESRKLFLVNAFKDYGGNDR 258 + + FKD G +R Sbjct: 333 KETGYKNIEIFKDLNGINR 351 Score = 37.0 bits (85), Expect = 2.4, Method: Composition-based stats. Identities = 6/42 (14%), Positives = 14/42 (33%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIV 43 ++ L +V L + D +L D + + + Sbjct: 22 NPRIETELILSQVLNLDRIMLYAYFDRILTDDEMSEIRTLLK 63 >gi|330823523|ref|YP_004386826.1| protein-(glutamine-N5) methyltransferase [Alicycliphilus denitrificans K601] gi|329308895|gb|AEB83310.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Alicycliphilus denitrificans K601] Length = 281 Score = 249 bits (637), Expect = 3e-64, Method: Composition-based stats. Identities = 80/261 (30%), Positives = 115/261 (44%), Gaps = 12/261 (4%) Query: 3 ALRDSHSFLCRVTGL---SSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRD 59 A D+ L G ++ LD R E + + G ++ Sbjct: 20 ARIDAQMLLLHALGRPTGDRAWLLAHDTDPLDAPALARYQALCARRAAGEPVAYLTGSKE 79 Query: 60 FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119 FY + L + + +PRP+TE+LVD AL P R+ DLGTG+GA+ LAL Sbjct: 80 FYGLPLRVDARVLDPRPDTEILVDWALELLAPL----PAPRVADLGTGSGAIALALQHAR 135 Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179 P + + VD S AL +A++NA G+ RF +Q+DW + + G FD IVSNPPYI + Sbjct: 136 PDARVLAVDASAGALAVARANAERLGLPVRF--VQADWLAGIAGPFDAIVSNPPYIPAQD 193 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 +P +L G DGL R IA L G +E G++Q V + Sbjct: 194 PHL---AALAHEPLSALASGADGLDDIRAIAAQAPALLAPGGWLLLEHGWDQAGAVQALL 250 Query: 240 ESRKLFLVNAFKDYGGNDRVL 260 + L V + D G R Sbjct: 251 RAAGLARVQSRDDLAGIARCT 271 >gi|298369665|ref|ZP_06980982.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Neisseria sp. oral taxon 014 str. F0314] gi|298282222|gb|EFI23710.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Neisseria sp. oral taxon 014 str. F0314] Length = 274 Score = 249 bits (637), Expect = 3e-64, Method: Composition-based stats. Identities = 77/264 (29%), Positives = 116/264 (43%), Gaps = 13/264 (4%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 ++ L R G + Q++ S + + R ++ E + ILG R+FY Sbjct: 14 PRNEARMLLQRALGCTRVQLLTQGGSEMSEHAAATAQELAHRRIQGEPMAYILGEREFYG 73 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 ++ D PRPETE LV++ L P+ R+ DLGTG+GAV +++ E P Sbjct: 74 RMFRVNPDVLIPRPETEHLVEAVLDRLPPQ------GRVWDLGTGSGAVAVSIALERPDA 127 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS----SVEGLFDVIVSNPPYIESV 178 + DIS AL A + + WF S + +D+IVSNPPYIE+ Sbjct: 128 RVRASDISAAALHTAAQ--NAAALGADIEFALGSWFDTDRPSEKKSYDIIVSNPPYIEAG 185 Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238 ++R F+P+ +L DGLS R +A G +L G +E G Q V + Sbjct: 186 DAHLEQGDLR-FEPQGALTDFSDGLSCIRALAAGSPAYLKNGGWLLLEHGCGQGAQVRAV 244 Query: 239 FESRKLFLVNAFKDYGGNDRVLLF 262 ++ D G DRV L Sbjct: 245 LAEHGFSRIDTLPDLAGLDRVTLG 268 >gi|149183884|ref|ZP_01862275.1| modification methylase, HemK family protein [Bacillus sp. SG-1] gi|148848403|gb|EDL62662.1| modification methylase, HemK family protein [Bacillus sp. SG-1] Length = 289 Score = 249 bits (637), Expect = 3e-64, Method: Composition-based stats. Identities = 73/261 (27%), Positives = 116/261 (44%), Gaps = 6/261 (2%) Query: 8 HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67 + + + Q++ + VL+D+ + I ++ I I+G+ +FY + ++ Sbjct: 29 ELLMKHLLEMDRSQLLANQRLVLEDKVKLEFARGITAHIQGTPIQHIIGFEEFYGRKFSV 88 Query: 68 SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 + PRPETE LV L +R D+GTG+GA+ + + E P + V Sbjct: 89 NEHVLIPRPETEELVYYTLEKIRKHFSADGELRFADIGTGSGAIAVTMKLEKPELFVMAV 148 Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIVDCLG 184 DIS AL +A+ NA GVS + L+ D + + DV+VSNPPYI +D L Sbjct: 149 DISANALHVARKNADNLGVS--VEFLEGDLLEPLISRDEKLDVLVSNPPYIPLGELDSLS 206 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-K 243 V+D +P +L GG GL Y+ + + + L EIG Q V + Sbjct: 207 EVVKDHEPHSALFGGESGLEFYQRFMEELPLVMKDRCLIGFEIGAGQGEAVAGMLRGAFP 266 Query: 244 LFLVNAFKDYGGNDRVLLFCR 264 D G DR++ R Sbjct: 267 EAHTEIIHDINGKDRMVFCTR 287 >gi|256421259|ref|YP_003121912.1| modification methylase, HemK family [Chitinophaga pinensis DSM 2588] gi|256036167|gb|ACU59711.1| modification methylase, HemK family [Chitinophaga pinensis DSM 2588] Length = 286 Score = 249 bits (637), Expect = 3e-64, Method: Composition-based stats. Identities = 82/262 (31%), Positives = 121/262 (46%), Gaps = 5/262 (1%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 +A +H + VTG+S IV + L Q LT A+ L HE + ++G FY Sbjct: 22 EAANIAHIVMEYVTGMSKMDRIVYKERELTTEQTSQLTAAVKALLAHEPVQYVIGSSWFY 81 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 + L ++ PRPETE LV+ + R + +ILD+GTG+GA+ LA+ KE P Sbjct: 82 GMELLVNPHVLIPRPETEELVEWIVQDI--RTAQLSQPQILDIGTGSGAIPLAIKKELPQ 139 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVI 179 VD+S AL+ AK NAV + F+ + ++ +FD+IVSNPPYI Sbjct: 140 AHVQAVDVSKGALQTAKDNAVKQQLDVTFELVDILNKTAWTHLPMFDIIVSNPPYICQRE 199 Query: 180 VDCLGLEVRDFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238 + +V ++P ++L D L YR I L G EI + + Sbjct: 200 SADMQEQVVSYEPSLALFVPDDDALLFYREIGWMGKEKLKNGGALYFEINEAFGTETAAL 259 Query: 239 FESRKLFLVNAFKDYGGNDRVL 260 E V KD G DR++ Sbjct: 260 LEGMGYLEVEIKKDLFGKDRMV 281 >gi|315651890|ref|ZP_07904893.1| protein-(glutamine-N5) methyltransferase [Eubacterium saburreum DSM 3986] gi|315485892|gb|EFU76271.1| protein-(glutamine-N5) methyltransferase [Eubacterium saburreum DSM 3986] Length = 281 Score = 249 bits (636), Expect = 3e-64, Method: Composition-based stats. Identities = 91/264 (34%), Positives = 142/264 (53%), Gaps = 12/264 (4%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQR-FFLTNAIVRSLKHESIHRILGWRDF 60 A D + V + + + DR++ L + + + L++ I IL F Sbjct: 21 DAGSDILLLIYEVFDFDFSKWTMFKYDEIKDREKLDILESYVSKRLENMPIQYILNKAYF 80 Query: 61 YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120 + PR +TE+LV+ L + + +ILD+ TG+GA+ ++L K Sbjct: 81 CGFPFFVDKSVLIPRFDTEVLVEEILRIA----KGDKNKKILDMCTGSGAIAISLKKLGG 136 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESV 178 F + VDIS ALEIAK NAV G F +SD FS + E +D+IVSNPPYI+S Sbjct: 137 FERVDAVDISNDALEIAKKNAVGLGCDINFS--KSDMFSGLTSENKYDIIVSNPPYIKSH 194 Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238 +VD L EV+DF+PR++LDG IDG+ Y+ I + ++LN +G+ ++EIGY++ D+ ++ Sbjct: 195 MVDSLESEVKDFEPRLALDGDIDGMKFYKIIKENFIKYLNPEGILALEIGYDEAKDIRKL 254 Query: 239 FESRKLFLVNAFKDYGGNDRVLLF 262 F+ F +N KD DRV + Sbjct: 255 FDG---FDINIKKDLSNLDRVAII 275 >gi|94264415|ref|ZP_01288205.1| Modification methylase HemK [delta proteobacterium MLMS-1] gi|93455172|gb|EAT05390.1| Modification methylase HemK [delta proteobacterium MLMS-1] Length = 319 Score = 249 bits (636), Expect = 3e-64, Method: Composition-based stats. Identities = 87/277 (31%), Positives = 136/277 (49%), Gaps = 15/277 (5%) Query: 2 QALRDSHSFLCRVT---------GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIH 52 +A +++ L V +++ D L Q L A R + E + Sbjct: 37 EAGQEAELLLSWVLAAGQKGHQAWDERAGLVLAADRPLSSAQIEKLRQAAARRSRREPLA 96 Query: 53 RILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLP-RIEKRDVVRILDLGTGTGAV 111 I+G +F+++ + PRPETELLV+ AL + R + ILDLGTG+G + Sbjct: 97 YIIGEWEFWSLPFAVDPGVLIPRPETELLVEEALRLAPQLRGGAGRPLTILDLGTGSGIL 156 Query: 112 CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVI 168 + L +E + + VD S AL +A+ N + V R L +DW S++ + LFD++ Sbjct: 157 AVVLARELAPARVIAVDRSPAALAVARRNVCRHRVESRVSLLAADWLSALAAGKALFDLV 216 Query: 169 VSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228 V+NPPY+E V + L EVRD++PR +LDGG G++ R +A + L G +EIG Sbjct: 217 VANPPYVEDVALPGLEPEVRDYEPRQALDGGAAGMAQIRRLAAELPPFLRPGGGLLMEIG 276 Query: 229 YNQKVDVVRIFE-SRKLFLVNAFKDYGGNDRVLLFCR 264 ++Q+ V ++ V D G R LL CR Sbjct: 277 WDQQGVVEQLLAPDNAWREVRILPDLAGLPR-LLCCR 312 >gi|257877102|ref|ZP_05656755.1| modification methylase HemK [Enterococcus casseliflavus EC20] gi|257811268|gb|EEV40088.1| modification methylase HemK [Enterococcus casseliflavus EC20] Length = 285 Score = 249 bits (636), Expect = 3e-64, Method: Composition-based stats. Identities = 77/256 (30%), Positives = 128/256 (50%), Gaps = 8/256 (3%) Query: 8 HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67 + ++ D + + + + L+HE +LG+ +FY RL + Sbjct: 27 QYLFLQRKNWQQLDWLLQMDQPILREDEAQIAADLEQLLQHEPPQYLLGYEEFYGHRLKV 86 Query: 68 SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 + T PRPETE LV++ L ++ +R++D+GTGTGA+ +AL P + V Sbjct: 87 TPATLIPRPETEELVENCLT----KLPADQPLRVVDIGTGTGAIAIALKLARPQWAVSAV 142 Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLE 186 D+S +AL +AK NA G RF Q D V + +D+IVSNPPYI + + + Sbjct: 143 DLSAEALAVAKENAAALGAEIRF--FQGDTLEPVADQQWDLIVSNPPYISAEEWPLMDIS 200 Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLF 245 VR+ +P+++L GL+ Y+ +A L +G ++EIG+ Q + V ++F + Sbjct: 201 VREKEPKMALFAQEQGLAIYKQLAQQAPNCLAPNGQMALEIGFQQGLAVQQLFAAAFPNK 260 Query: 246 LVNAFKDYGGNDRVLL 261 V KD G DR++ Sbjct: 261 EVTVVKDLAGQDRMVF 276 >gi|255009911|ref|ZP_05282037.1| putative protoporphyrinogen oxidase [Bacteroides fragilis 3_1_12] gi|313147699|ref|ZP_07809892.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12] gi|313136466|gb|EFR53826.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12] Length = 278 Score = 249 bits (636), Expect = 3e-64, Method: Composition-based stats. Identities = 75/261 (28%), Positives = 119/261 (45%), Gaps = 12/261 (4%) Query: 8 HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67 C + G + + D +L ++ L + + R K+E I I G +FY + Sbjct: 26 KMICCDLLGQDAIDYYLGKDIILSANEQRDLESIVERLKKNEPIQYIQGRANFYGSMFRV 85 Query: 68 SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 + PRPETE LVD + E VR+LD+GTG+G + ++L K P + Sbjct: 86 APGVLIPRPETEELVDLIVK------ESATGVRLLDIGTGSGCIAISLSKHIPGAEVTAW 139 Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFS---SVEGLFDVIVSNPPYIESVIVDCLG 184 D+S AL IA+ N F+ + D FS S + +D+IVSNPPY+ + + Sbjct: 140 DVSEDALAIARQNNQELKTKVNFE--KVDVFSTEFSGDRRYDIIVSNPPYVTESEKNEME 197 Query: 185 LEVRDFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 V D++P ++L D L YR IA L+ G EI +++++ + Sbjct: 198 PNVLDWEPGLALFVPDNDPLLFYRRIASLGREMLSLHGKLYFEINRAYGEEILQMLGGKG 257 Query: 244 LFLVNAFKDYGGNDRVLLFCR 264 + KD GNDR++ R Sbjct: 258 YRDLRLIKDISGNDRIVTAKR 278 >gi|313889399|ref|ZP_07823047.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptococcus pseudoporcinus SPIN 20026] gi|313122231|gb|EFR45322.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptococcus pseudoporcinus SPIN 20026] Length = 276 Score = 249 bits (636), Expect = 3e-64, Method: Composition-based stats. Identities = 84/254 (33%), Positives = 130/254 (51%), Gaps = 14/254 (5%) Query: 13 RVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTF 72 V S ++ + + + L + + + S I G F + LT++ Sbjct: 30 EVKEWSLLDFLLHQNKQITAEDQVLLKSIFEQLYRGRSPQYITGKAYFRELILTVNESVL 89 Query: 73 EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCK 132 PRPETE LV+ LA + KR +++LD+GTG+GA+ ++L KE P +K DIS + Sbjct: 90 IPRPETEELVELILAEN-----KRHDLQLLDIGTGSGAIAISLKKERPSWKVTASDISLE 144 Query: 133 ALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDP 192 ALE+A+ NA+ NG F QSD FSS+ G FD+IVSNPPYI + +G V +P Sbjct: 145 ALEVAQINALKNGTDIMFS--QSDLFSSLSGKFDIIVSNPPYIAFADKEEVGRNVLASEP 202 Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD----VVRIFESRKLFLVN 248 ++L +GL+ YR+I + ++L+ G EIGY Q V F ++ Sbjct: 203 HLALFAEEEGLAIYRSILEQAEQYLSPQGKLYFEIGYKQGQALFDLVKTNFPEKRF---R 259 Query: 249 AFKDYGGNDRVLLF 262 +D G DR+++ Sbjct: 260 LKQDCYGKDRMVII 273 >gi|72162817|ref|YP_290474.1| modification methylase HemK [Thermobifida fusca YX] gi|71916549|gb|AAZ56451.1| modification methylase HemK [Thermobifida fusca YX] Length = 285 Score = 249 bits (636), Expect = 3e-64, Method: Composition-based stats. Identities = 76/266 (28%), Positives = 118/266 (44%), Gaps = 10/266 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 D+ V G+ ++ DS D R + R E + I G F Sbjct: 23 PRADAEELAAFVHGVRRGELHTVADSDFDAR----YWECVARRAAREPLQHITGRAYFRY 78 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L + F PRPETE++V A+ + ++DLGTG+GA+ +++ +E P Sbjct: 79 LELEVGPGVFIPRPETEMMVSWAIDTLRAMDVADPL--VVDLGTGSGAIAISIAQEVPRS 136 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD---WFSSVEGLFDVIVSNPPYIESVI 179 + V++ AL AK N +G+ ER +D G D++++NPPY+ Sbjct: 137 RVHAVEVDATALSWAKRNIARSGLGERITAHHADMRTCLPEYHGRVDLVITNPPYVPLDS 196 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 D + EVRD+DP I+L G DGL R + R L G ++E G Q +D+ +F Sbjct: 197 ADEIPPEVRDYDPAIALWAGPDGLDMIRQLEAVGRRLLRPGGYIAIEHGDGQGIDIPPLF 256 Query: 240 -ESRKLFLVNAFKDYGGNDRVLLFCR 264 E V KD DR ++ R Sbjct: 257 PEELGWCEVRNRKDLAHRDRFVVARR 282 >gi|293553328|ref|ZP_06673964.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Enterococcus faecium E1039] gi|291602552|gb|EFF32768.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Enterococcus faecium E1039] Length = 279 Score = 249 bits (636), Expect = 3e-64, Method: Composition-based stats. Identities = 76/255 (29%), Positives = 120/255 (47%), Gaps = 9/255 (3%) Query: 8 HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67 ++ + + + ++ + + L +LG+ DFY+ RL + Sbjct: 28 QFLFLERKQWKKLDWLLHMNEEISEEEQRLIETDLRLLLADHPPQYLLGYADFYDHRLKV 87 Query: 68 SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 + T PRPETE LV+ L + + ++D+GTGTGA+ ++L + V Sbjct: 88 TEATLIPRPETEELVEWCLDET-----PDVPLEVIDIGTGTGAIAISLKAARRNWHVSAV 142 Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLE 186 D+S +ALE+AK NA G + D V + FDVI+SNPPYI + + Sbjct: 143 DLSEEALEVAKENAQKEGT--KISFYHGDTLGPVMDQQFDVIISNPPYISRNEWELMDES 200 Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLF 245 VR F+P+I+L DGL+ Y IA L +G +EIG+ Q V +IF+ Sbjct: 201 VRSFEPKIALFAENDGLAIYEKIAVEAPSVLKSNGKIFLEIGFRQGEAVKKIFQQAFPDK 260 Query: 246 LVNAFKDYGGNDRVL 260 V KD GN+R++ Sbjct: 261 KVAIKKDLFGNERMI 275 >gi|260753917|ref|YP_003226810.1| modification methylase, HemK family [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|258553280|gb|ACV76226.1| modification methylase, HemK family [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 286 Score = 249 bits (636), Expect = 3e-64, Method: Composition-based stats. Identities = 84/268 (31%), Positives = 139/268 (51%), Gaps = 15/268 (5%) Query: 1 MQALRDSHSFLCRVTGLSSHQVIV----DPDSVLDDRQRFFLTNAIVRSLKHESIHRILG 56 M A D+ + G+ +++ + ++ L AI R ++E + ILG Sbjct: 30 MTARLDAELLMAHSLGIERDALLLGSWGEKEAPLS------FFEAIKRRKQNEPVAYILG 83 Query: 57 WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116 +RDF+ +RLT++ D PRP++E L+++A+A+ R + ILDLGTG+GA+ LA L Sbjct: 84 YRDFWTLRLTVTPDVLIPRPDSETLIETAIAYF--REQAFLPENILDLGTGSGALLLAAL 141 Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE 176 E KG+GVD S +A++IA+ NA G R + W ++ FD+++ NPPYI Sbjct: 142 DEWKDAKGLGVDASPEAIKIARLNADKCGALPRVEFKIGHWGRGIQQKFDLLLCNPPYIA 201 Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236 + + +V ++P ++L G +GL YR I + L + G+ +EIG++Q +V Sbjct: 202 RDAM--MPADVLHYEPHLALFSGDEGLDDYREIIPEIPSLLTERGIACLEIGFDQAENVS 259 Query: 237 RIFESRKLFLVNAFKDYGGNDRVLLFCR 264 I + L F D R +L R Sbjct: 260 MIAKETGLRS-RIFYDLEQRPRCVLLSR 286 >gi|21910336|ref|NP_664604.1| putative protoporphyrinogen oxidase [Streptococcus pyogenes MGAS315] gi|28895911|ref|NP_802261.1| protoporphyrinogen oxidase [Streptococcus pyogenes SSI-1] gi|21904532|gb|AAM79407.1| putative protoporphyrinogen oxidase [Streptococcus pyogenes MGAS315] gi|28811161|dbj|BAC64094.1| putative protoporphyrinogen oxidase [Streptococcus pyogenes SSI-1] Length = 279 Score = 249 bits (636), Expect = 3e-64, Method: Composition-based stats. Identities = 74/246 (30%), Positives = 122/246 (49%), Gaps = 8/246 (3%) Query: 17 LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRP 76 SS +++ + + L + +H S I G F +++L + PRP Sbjct: 34 WSSLDMLIHQNQAVTPEDAVLLEHIFCSLSQHLSPQYITGNAYFRDLKLAVDKRVLIPRP 93 Query: 77 ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136 ETE LVD LA +L + +LD+GTG+GA+ ++L KE ++ DIS AL++ Sbjct: 94 ETEELVDMILAENLDA-----PLNVLDIGTGSGAIAISLKKERSNWQVTASDISRAALDL 148 Query: 137 AKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL 196 AK+NA + ++SD FS + G FD+IVSNPPYI + + L V +P ++L Sbjct: 149 AKANADAYQLD--ITFIESDVFSLISGTFDIIVSNPPYISYEDKEEVSLNVLQSEPHLAL 206 Query: 197 DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDYGG 255 +G + YR I + +L K+G EIGY Q + + ++ + D G Sbjct: 207 FAKENGYAIYRKIIEQADNYLAKEGKLYFEIGYKQAEGIKDMLQAYFPQRHIRVVTDIFG 266 Query: 256 NDRVLL 261 +R+++ Sbjct: 267 KERMVV 272 >gi|163788596|ref|ZP_02183041.1| putative protoporphyrinogen oxidase [Flavobacteriales bacterium ALC-1] gi|159875833|gb|EDP69892.1| putative protoporphyrinogen oxidase [Flavobacteriales bacterium ALC-1] Length = 492 Score = 249 bits (636), Expect = 3e-64, Method: Composition-based stats. Identities = 77/274 (28%), Positives = 124/274 (45%), Gaps = 16/274 (5%) Query: 6 DSHSFLC--RVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63 DS FLC L Q+ ++P+ L+ + + + + I ILG +FY + Sbjct: 24 DSFFFLCTEHYLNLPRFQLSLEPEFTLNKSETGIFFKVLEDLNQQKPIQYILGETEFYGL 83 Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 ++ + PRPETE LVD + + + E+ +RILD+GTG+G + ++L K P + Sbjct: 84 PFKVNENVLIPRPETEELVDLIIKYHSEQSEESQ-LRILDIGTGSGCIAISLAKNLPSAE 142 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERF------------DTLQSDWFSSVEGLFDVIVSN 171 +D+S AL+IAK NA N VS F + +FD+IVSN Sbjct: 143 VYALDVSEDALKIAKQNADLNNVSINFIETDILKISNDSFFWKDITLQQKRLVFDIIVSN 202 Query: 172 PPYIESVIVDCLGLEVRDFDPRISLDGGID-GLSHYRTIADGVSRHLNKDGLCSVEIGYN 230 PPY+ ++ + V D +P ++L D L Y+ I + +L G EI Sbjct: 203 PPYVRNLEKQEIKPNVLDNEPHLALFVEDDNPLLFYKEITNFAIDNLKPKGELYFEINQY 262 Query: 231 QKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 + + + + KD GNDR+L + Sbjct: 263 LGHETKALLVNANFENMELLKDLNGNDRMLKGRK 296 >gi|86156793|ref|YP_463578.1| HemK family modification methylase [Anaeromyxobacter dehalogenans 2CP-C] gi|85773304|gb|ABC80141.1| [protein release factor]-glutamine N5-methyltransferase [Anaeromyxobacter dehalogenans 2CP-C] Length = 286 Score = 249 bits (636), Expect = 4e-64, Method: Composition-based stats. Identities = 76/259 (29%), Positives = 116/259 (44%), Gaps = 11/259 (4%) Query: 7 SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66 + L ++ +D D L + + R + E + G RDFY Sbjct: 32 AELLLAHALRCERMRLYLDFDKPLGAPELAAFRELVRRRGEGEPTAYLTGRRDFYGRPFR 91 Query: 67 LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126 + + PRPETEL++++A R + LDL TG+GA+ ++L E + V Sbjct: 92 VDARVLVPRPETELVLEAA------RDALPEGGAALDLCTGSGALGVSLALERAGARVVA 145 Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIESVIVDCLG 184 D+S AL +A+ NA G + D Q D ++++ FDVIVSNPPY+ +D L Sbjct: 146 TDLSADALVVAEENARALGAA--VDLRQGDLWAALREGERFDVIVSNPPYVPRGELDTLP 203 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 EVR +PR++LDGG DGL R I +G L G +E+ + R+ Sbjct: 204 REVRR-EPRLALDGGPDGLDLLRRIVEGAPARLVPGGTLVLEMHERHLDVLPRLCREAGF 262 Query: 245 FLVNAFKDYGGNDRVLLFC 263 A D G R+ + Sbjct: 263 ERAEARPDLAGLPRLTVAR 281 >gi|162147701|ref|YP_001602162.1| HemK protein [Gluconacetobacter diazotrophicus PAl 5] gi|209542325|ref|YP_002274554.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Gluconacetobacter diazotrophicus PAl 5] gi|161786278|emb|CAP55860.1| putative hemK homolog protein [Gluconacetobacter diazotrophicus PAl 5] gi|209530002|gb|ACI49939.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Gluconacetobacter diazotrophicus PAl 5] Length = 293 Score = 249 bits (636), Expect = 4e-64, Method: Composition-based stats. Identities = 86/261 (32%), Positives = 127/261 (48%), Gaps = 5/261 (1%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 R++ + V ++ S +D + + R HE + I G F++ Sbjct: 34 PRREARLLMAHVLRTDLAGLLAR--SAMDAAEHRSFVALVARRAAHEPMAYITGRAGFWS 91 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L + T PR ++E LV++ LA R ++ V ILDLGTGTG + LA L E P Sbjct: 92 LDLETAPATLIPRADSETLVEALLA---QRPDRGAVRTILDLGTGTGCLLLAALSEYPDA 148 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182 G+GVDI A +A NA G+ +R L +DW +++ G FDV+ SNPPYI + Sbjct: 149 WGLGVDIDPDAAHLAARNARRTGLRDRCAMLAADWSTAIAGRFDVVFSNPPYIPRADLAG 208 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 L +VRD +P +LDGG DGL YR + + L G+ EIG Q+ + + Sbjct: 209 LMPDVRDHEPARALDGGTDGLDAYRLLTGALPSLLAHGGIAIFEIGIGQERSMPDLARQA 268 Query: 243 KLFLVNAFKDYGGNDRVLLFC 263 L +V D GG R +L Sbjct: 269 GLDIVGIRTDLGGIPRAVLMQ 289 >gi|15675119|ref|NP_269293.1| putative protoporphyrinogen oxidase [Streptococcus pyogenes M1 GAS] gi|71910677|ref|YP_282227.1| peptide release factor-glutamine N5-methyltransferase [Streptococcus pyogenes MGAS5005] gi|13622278|gb|AAK34014.1| putative protoporphyrinogen oxidase [Streptococcus pyogenes M1 GAS] gi|71853459|gb|AAZ51482.1| peptide release factor-glutamine N5-methyltransferase [Streptococcus pyogenes MGAS5005] Length = 279 Score = 249 bits (636), Expect = 4e-64, Method: Composition-based stats. Identities = 75/246 (30%), Positives = 123/246 (50%), Gaps = 8/246 (3%) Query: 17 LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRP 76 SS +++ + + L + +H S I G F +++L + PRP Sbjct: 34 WSSLDMLIHQNQAVTPEDAVLLEHIFCSLSQHLSPQYITGNAYFRDLKLAVDKRVLIPRP 93 Query: 77 ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136 ETE LVD LA +L + +LD+GTG+GA+ ++L KE P ++ DIS AL++ Sbjct: 94 ETEELVDMILAENLDA-----PLNVLDIGTGSGAIAISLKKERPNWQVTASDISRAALDL 148 Query: 137 AKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL 196 AK+NA + ++SD FS + FD+IVSNPPYI + + L V +P ++L Sbjct: 149 AKANADAYQLD--ITFIESDVFSLISETFDIIVSNPPYISYEDKEEVSLNVLQSEPHLAL 206 Query: 197 DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDYGG 255 +G + YR I + +L K+G EIGY Q + + ++ + A D G Sbjct: 207 FAKENGYAIYRKIIEQADNYLTKEGKLYFEIGYKQAEGIKDMLQAYFPQRHIRAVTDIFG 266 Query: 256 NDRVLL 261 +R+++ Sbjct: 267 KERMVV 272 >gi|188996114|ref|YP_001930365.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Sulfurihydrogenibium sp. YO3AOP1] gi|188931181|gb|ACD65811.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Sulfurihydrogenibium sp. YO3AOP1] Length = 291 Score = 249 bits (636), Expect = 4e-64, Method: Composition-based stats. Identities = 70/269 (26%), Positives = 123/269 (45%), Gaps = 11/269 (4%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 ++ + ++ L H +I PD + + L + + + ++F+ Sbjct: 21 NPANEALILISKILNLPKHHIISYPDLEISEEDAKKLVVLSEKRASGYPMAYLTKNKEFF 80 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI-LDLGTGTGAVCLALLKESP 120 + + PRPETE+LV+ + +++ I L++G G+G + ++LLK Sbjct: 81 GLDFYIEEGVLIPRPETEILVEKVIE----KLQNAKGELIGLEVGVGSGCISVSLLKNIK 136 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSER-----FDTLQSDWFSSVEGLFDVIVSNPPYI 175 K +G+DIS KALEI + +A + V +R F+ + S D +VSNPPYI Sbjct: 137 NLKIIGIDISEKALEITEKSAKIHEVLDRLKLFKFNIMNGKMNSLNLPKLDFVVSNPPYI 196 Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235 + L EV+ +P+ +L G +G Y I + + L +DG + E+G Q V Sbjct: 197 KEEDYQKLQKEVKK-EPKEALISGKEGTEFYEKIVNSLKDFLKEDGFFAFEVGIGQAEKV 255 Query: 236 VRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 I E + +KD G DRV++ + Sbjct: 256 KLILEDNGYKNIEIYKDLAGIDRVIIASK 284 >gi|159044281|ref|YP_001533075.1| putative protein methyltransferase [Dinoroseobacter shibae DFL 12] gi|157912041|gb|ABV93474.1| putative protein methyltransferase [Dinoroseobacter shibae DFL 12] Length = 274 Score = 249 bits (636), Expect = 4e-64, Method: Composition-based stats. Identities = 82/232 (35%), Positives = 128/232 (55%), Gaps = 8/232 (3%) Query: 31 DDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSL 90 +D + L +A+ + + +I+G R F+ ++ D +PRP+TE LV+ ALA Sbjct: 48 NDWTLYTLEDAVKARAARQPVSQIIGRRAFFKHDFEVTPDVLDPRPDTETLVEVALAH-- 105 Query: 91 PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150 +LD+G+G+G + L+LL E P G+G+DIS AL++A+ NA G++ R Sbjct: 106 ------PFDTVLDIGSGSGCILLSLLAERPEATGLGIDISAPALDVARRNADRLGLAGRA 159 Query: 151 DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210 +SDW + V+ FD+IVSNPPYI++ L E+RD++PR +L+ G DGL YR IA Sbjct: 160 RFRRSDWLAEVDEQFDLIVSNPPYIDAATYATLAPELRDWEPRGALEAGADGLDAYRVIA 219 Query: 211 DGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262 R L G +EIG++Q V + + + +D G DRV+ Sbjct: 220 RDAPRVLAPGGTLCLEIGHDQGRSVPALLAASGWRQITVQRDLIGKDRVVTA 271 >gi|296111566|ref|YP_003621948.1| protoporphyrinogen oxidase (putative) [Leuconostoc kimchii IMSNU 11154] gi|295833098|gb|ADG40979.1| protoporphyrinogen oxidase (putative) [Leuconostoc kimchii IMSNU 11154] Length = 331 Score = 249 bits (636), Expect = 4e-64, Method: Composition-based stats. Identities = 81/261 (31%), Positives = 126/261 (48%), Gaps = 9/261 (3%) Query: 6 DSH----SFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 D+ L ++ + + + I + L ++ + ILG FY Sbjct: 70 DAQDNVDFLLSGALNINYAYLRANITRTMPADLATVWPKWIAKLLANQPVQYILGHAPFY 129 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 + PRPETE LV+ L +I + + +LD+GTG+GA+ L+ E+ Sbjct: 130 GREFIVDERVLIPRPETEQLVEWILKDVSSQIAQ--PISVLDIGTGSGAIIETLMLENSD 187 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIV 180 +G DIS AL +A+ NA G+ ++SD +S+V G FDVIVSNPPYI S Sbjct: 188 IRGFAADISSDALAVAELNAQRLGL-HYLHVIESDVYSAVAGLKFDVIVSNPPYIASTDE 246 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 D + + V +F+PR +L DGL+ Y +A+ + HL + G EIGY Q VV I + Sbjct: 247 DEMDISVLNFEPRTALFAEHDGLAIYELLAEKLDAHLTEHGRAYFEIGYKQGQQVVDIMQ 306 Query: 241 SR-KLFLVNAFKDYGGNDRVL 260 + +D+ G DR++ Sbjct: 307 QALPQAKITLRQDFAGLDRMI 327 >gi|147669661|ref|YP_001214479.1| HemK family modification methylase [Dehalococcoides sp. BAV1] gi|146270609|gb|ABQ17601.1| modification methylase, HemK family [Dehalococcoides sp. BAV1] Length = 277 Score = 248 bits (635), Expect = 4e-64, Method: Composition-based stats. Identities = 71/263 (26%), Positives = 115/263 (43%), Gaps = 10/263 (3%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 +A +S L G+S Q+ ++ + L + + R L+ E I G ++FY Sbjct: 21 EARLESEILLRHTLGISRVQLHLELERELKPEKETVYFETLQRRLEGEPSAYITGEKEFY 80 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 + PRPETE L++ AL + + I D+GTG+G + + L E Sbjct: 81 GRTFLVDKRVLIPRPETEHLIEKALQIAR----HYECPYIADIGTGSGVIAITLALELKD 136 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181 DIS ALE+A+ NA + +R Q D SS+ + D++ +N PY+ Sbjct: 137 AYVYAADISEDALEVARQNAEEYRLEKRLSFYQGDLLSSLPEMVDILAANLPYVPKAEAG 196 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 L +PR++LDGG DGL YR + + L G +EIG +Q + + + Sbjct: 197 LLNG-----EPRLALDGGKDGLDLYRRLIPILPARLRPGGTALLEIGIHQSELLAKYIKD 251 Query: 242 -RKLFLVNAFKDYGGNDRVLLFC 263 + DY G R++ Sbjct: 252 TLPQASLEIISDYAGIPRIVALT 274 >gi|257092417|ref|YP_003166058.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257044941|gb|ACV34129.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 274 Score = 248 bits (635), Expect = 4e-64, Method: Composition-based stats. Identities = 82/260 (31%), Positives = 127/260 (48%), Gaps = 11/260 (4%) Query: 4 LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63 D+ + V + ++I +P L Q L + + R E + +LG FY + Sbjct: 16 RLDARLLVEHVAACTHAELISEPMRRLLAEQAQVLADLVERRAAGEPLAYLLGSAGFYGI 75 Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 ++ PRPETELLV A+ +E RI+DLGTG+G V + + P + Sbjct: 76 EFQITPAVLIPRPETELLVTLAVKC----VESLAEPRIVDLGTGSGVVAVTVGCLCPAAR 131 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDC 182 VD+S AL++A+ NA +GV L DW++ + + FD+IV+NPPY+ + Sbjct: 132 ITAVDLSPSALDLARINAGRHGVEA--TFLVGDWYTPLGDCGFDLIVANPPYVANDDEH- 188 Query: 183 LGLEVRDFDPRISLDGGI---DGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 L + F+PR++L G+ DGL+ R I DG RHL G +E GY+Q V Sbjct: 189 LQRDGLPFEPRMALTDGVPGGDGLACIRRITDGARRHLLPGGWLLIEHGYDQAAAVRNEL 248 Query: 240 ESRKLFLVNAFKDYGGNDRV 259 L V +++D +RV Sbjct: 249 HKAGLSDVASWQDLARIERV 268 >gi|325141378|gb|EGC63860.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Neisseria meningitidis 961-5945] Length = 245 Score = 248 bits (635), Expect = 4e-64, Method: Composition-based stats. Identities = 81/242 (33%), Positives = 115/242 (47%), Gaps = 12/242 (4%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 ++ L V+ + Q++ + D R R L E + ILG R+FY Sbjct: 13 PKNEARMLLQYVSEYTRVQLLTRGGEEMPDEVRQRADRLAQRRLNGEPVAYILGVREFYG 72 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 R T++ PRPETE LV++ LA + R+ DLGTG+GAV + + E P Sbjct: 73 RRFTVNPSVLIPRPETEHLVEAVLARL------PENGRVWDLGTGSGAVAVTVALERPDA 126 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS---SVEGLFDVIVSNPPYIESVI 179 DIS ALE A+ NA G R + WF EG +D+IVSNPPYIE+ Sbjct: 127 FVRASDISPPALETARKNAADLGA--RVEFAHGSWFDTDMPSEGKWDIIVSNPPYIENGD 184 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 ++R F+P+I+L DGLS RT+A G L + G +E G++Q V + Sbjct: 185 KHLSQGDLR-FEPQIALTDFSDGLSCIRTLAQGAPDRLAEGGFLLLEHGFDQGAAVRGVL 243 Query: 240 ES 241 Sbjct: 244 AE 245 >gi|209883258|ref|YP_002287115.1| protein-(glutamine-N5) methyltransferase [Oligotropha carboxidovorans OM5] gi|209871454|gb|ACI91250.1| protein-(glutamine-N5) methyltransferase [Oligotropha carboxidovorans OM5] Length = 290 Score = 248 bits (635), Expect = 4e-64, Method: Composition-based stats. Identities = 100/263 (38%), Positives = 139/263 (52%), Gaps = 1/263 (0%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 D+ L V L +I LD + L + I R + E + RILG R+F+ Sbjct: 27 PELDARLLLGDVLQLDLTGLITAATRRLDTSEAQRLEDVIRRRIAGEPVARILGRREFWG 86 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + LS T PRP+TE L+++ L +RILD+GTG+GA+ LALL E P Sbjct: 87 LTFALSPATLVPRPDTETLIEAVLDILKREGRTAAPLRILDIGTGSGAILLALLSELPNT 146 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182 G+G DI+ A+ A NA T G++ R + D+ ++ G FD++VSNPPYI + +D Sbjct: 147 TGIGTDINPAAIATAADNAATLGLASRATFVACDYAGALRGPFDIVVSNPPYIPTADIDH 206 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 L LEVR DPR++LDGG DGL+ YRTIA L G+ +VEIG Q V + Sbjct: 207 LDLEVRAHDPRLALDGGADGLTAYRTIAPLAFALLAPSGIAAVEIGQRQAHGVATLMAEA 266 Query: 243 KLFLVNAFK-DYGGNDRVLLFCR 264 L + K D GG RV+ + Sbjct: 267 GLAVPAPAKADLGGVPRVVTARK 289 >gi|332687008|ref|YP_004456782.1| methylase of polypeptide chain release factors [Melissococcus plutonius ATCC 35311] gi|332371017|dbj|BAK21973.1| methylase of polypeptide chain release factors [Melissococcus plutonius ATCC 35311] Length = 279 Score = 248 bits (635), Expect = 5e-64, Method: Composition-based stats. Identities = 69/252 (27%), Positives = 115/252 (45%), Gaps = 11/252 (4%) Query: 16 GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75 + + ++ L + + L +LG +FY + ++ T PR Sbjct: 35 NWEKIDWLQHMKETMSKEEKKQLETDLSKLLNDYPPQYLLGETEFYGLPFLVNEHTLIPR 94 Query: 76 PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135 PETE LVD L + I+D+GTGTGA+ ++L P ++ G+DIS +AL Sbjct: 95 PETEELVDYCLKENEAAYS-----TIVDVGTGTGAIAISLKHARPQWQVTGIDISKQALI 149 Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVIVDCLGLEVRDFDP 192 +A+ NA + D L D + D+I+SNPPYI + + V ++P Sbjct: 150 VAQENAKILNTT--IDFLSGDLLEPLMMNGQKVDMIISNPPYISKAEKNWMDRSVIKYEP 207 Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFK 251 ++L +GL+ Y+ +A+ + L +DG +EIG+ Q V IF+ + K Sbjct: 208 ALALFADQNGLAIYQRLAEEAKKVLKEDGKIYLEIGFQQGKAVQEIFQQAFPTKQIIIKK 267 Query: 252 DYGGNDRVLLFC 263 D NDR++ Sbjct: 268 DLAKNDRIVAIT 279 >gi|229542477|ref|ZP_04431537.1| modification methylase, HemK family [Bacillus coagulans 36D1] gi|229326897|gb|EEN92572.1| modification methylase, HemK family [Bacillus coagulans 36D1] Length = 287 Score = 248 bits (635), Expect = 5e-64, Method: Composition-based stats. Identities = 73/263 (27%), Positives = 112/263 (42%), Gaps = 8/263 (3%) Query: 5 RDS---HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 RD+ L + +++ + VL A K + I G+ FY Sbjct: 23 RDAQAGEILLGHFLDMDRTRLLSNLRMVLPPDVEAKFRQAAEAHAKGVPVQHITGYETFY 82 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 + ++ D PRPETE LV A+ + +++ D+GTG+G + + E P Sbjct: 83 GRKFFVNGDVLIPRPETEELVQGAIGRIRRHFGETKGLKLADIGTGSGIIATTIKLELPE 142 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVI 179 DIS KAL +A+ NA RF + D D+++SNPPYI Sbjct: 143 LLVYASDISEKALAVAEKNAEALHADIRF--VHGDLLQPFIHGEKLDIVLSNPPYIPETD 200 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 L + VRD DP +L GG DGL+ YR + + L+K L EIG Q V + Sbjct: 201 RSSLSVVVRDHDPETALFGGEDGLAFYRRFMETLPSVLSKRALVGFEIGSGQGERVSCLL 260 Query: 240 ESR-KLFLVNAFKDYGGNDRVLL 261 +V +D G++R++ Sbjct: 261 RDTFPESVVEVVRDINGHERMVF 283 >gi|303247809|ref|ZP_07334078.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Desulfovibrio fructosovorans JJ] gi|302490893|gb|EFL50792.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Desulfovibrio fructosovorans JJ] Length = 326 Score = 248 bits (635), Expect = 5e-64, Method: Composition-based stats. Identities = 78/256 (30%), Positives = 121/256 (47%), Gaps = 6/256 (2%) Query: 7 SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66 + L GL +I+ D L + + + R + E + +LG R+FY + Sbjct: 69 AQLLLAHALGLDRLGLILAMDRPLIEAELDAYRPLVARRGQGEPVAYLLGEREFYGLSFA 128 Query: 67 LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126 +S DT PRPETE +V+ AL + DLGTG+G + + L + P GV Sbjct: 129 VSPDTLIPRPETEGIVEHALEL----FPGDGPGSLADLGTGSGCLAVTLAVKWPLATGVA 184 Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVDCLG 184 +D S AL +A+ NA +GV R D +++D+ + +G + ++VSNPPY+ + Sbjct: 185 LDRSAGALTVARGNAARHGVDGRLDFVEADFAALPVRQGGYGLVVSNPPYVSAAEYRACS 244 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 EVRDF+P+ +L G GL +A L G VEIG+ Q + Sbjct: 245 FEVRDFEPQGALVPGESGLEAVPVVARTAFDRLAPGGWLLVEIGWEQGPAAAAVLAEAGF 304 Query: 245 FLVNAFKDYGGNDRVL 260 V +D G+DRV+ Sbjct: 305 ADVAVRRDLAGHDRVV 320 >gi|319900206|ref|YP_004159934.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacteroides helcogenes P 36-108] gi|319415237|gb|ADV42348.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacteroides helcogenes P 36-108] Length = 312 Score = 248 bits (635), Expect = 5e-64, Method: Composition-based stats. Identities = 76/265 (28%), Positives = 111/265 (41%), Gaps = 8/265 (3%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 +A S C + G S+ + D +L +++ L + R E I + G F Sbjct: 54 EAACLSRIICCEMLGQSTVDYYLGKDMILSLKEKQELDGILSRLRDFEPIQYVQGTTSFL 113 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 ++ PRPETE LV+ L E RILD+GTG+G + ++L K P Sbjct: 114 GRTFRVAPGVLIPRPETEELVEIMLK------EIPADARILDIGTGSGCIAVSLSKGLPC 167 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS-DWFSSVEGLFDVIVSNPPYIESVIV 180 + V DIS +AL A N S +F E +DVIVSNPPY+ Sbjct: 168 AQVVAWDISEEALATAHRNNDALQASVQFALCDVLTCCPDQEDRYDVIVSNPPYVLEKEK 227 Query: 181 DCLGLEVRDFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 + V D++P ++L D L YR IA+ + L G EI V + Sbjct: 228 LQMERNVLDWEPSLALFVPDTDPLLFYRRIAELGQKLLVAGGKLYFEINRAFGEATVAML 287 Query: 240 ESRKLFLVNAFKDYGGNDRVLLFCR 264 + + KD GNDR ++ R Sbjct: 288 GGQGYANAHILKDISGNDRFVIAER 312 >gi|227823187|ref|YP_002827159.1| putative modification methylase, HemK family [Sinorhizobium fredii NGR234] gi|227342188|gb|ACP26406.1| putative modification methylase, HemK family [Sinorhizobium fredii NGR234] Length = 298 Score = 248 bits (635), Expect = 5e-64, Method: Composition-based stats. Identities = 105/213 (49%), Positives = 142/213 (66%) Query: 50 SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109 ++RILG R+F+ + LS +T EPRP+TE LVD + + ++ R++D+GTGTG Sbjct: 71 PVYRILGEREFHGLTFRLSKETLEPRPDTETLVDCLIPYVRRIAARKGCCRLIDMGTGTG 130 Query: 110 AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIV 169 A+CLALL + +G G DIS AL A+ NA NG+++RF TL+SDWF +VEG FD+IV Sbjct: 131 AICLALLAAALEARGFGTDISEDALATARENAKRNGLADRFQTLRSDWFETVEGRFDIIV 190 Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY 229 SNPPYI S +V L EVR DP +LDGG DGL YR IA RHL DG+ +EIG+ Sbjct: 191 SNPPYIRSSVVGELEPEVRYHDPAAALDGGNDGLDVYRAIAQHAGRHLETDGVVGLEIGF 250 Query: 230 NQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262 +QK V +F+++ L+ + D GGNDRVL+F Sbjct: 251 DQKHAVTALFQAQGFRLLESAMDLGGNDRVLIF 283 >gi|283798431|ref|ZP_06347584.1| protein-(glutamine-N5) methyltransferase [Clostridium sp. M62/1] gi|291073836|gb|EFE11200.1| protein-(glutamine-N5) methyltransferase [Clostridium sp. M62/1] Length = 338 Score = 248 bits (634), Expect = 5e-64, Method: Composition-based stats. Identities = 78/298 (26%), Positives = 121/298 (40%), Gaps = 44/298 (14%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLD----DRQRFFLTNAIVRSLKHESIHRILGW 57 +A D+ + ++D + + ++ I + + ILG Sbjct: 39 EAQLDAWYLFSESFPIDRVHFLMDRNRPMHREIFEKGWPLFAERIEKRASRIPLQHILGS 98 Query: 58 RDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117 ++F + ++ PR +TE LV+ L R ILD+ TG+G + L+L Sbjct: 99 QEFMGLSFRVNEHVLIPRQDTETLVEEVLRDCPDR-----NADILDMCTGSGCIGLSLAV 153 Query: 118 ESPFFKGVGVDISCKALEIAKSNAVT---------------------------------- 143 + D+S AL +A NA Sbjct: 154 LGRYRSVTAADVSEDALRVAAGNAKRLFLIQKDVVRAESKNFPGLPLRTELTVWAGKNRE 213 Query: 144 NGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202 N + +F ++SD FS +DVIVSNPPYI S V+ L EVR+ +PR++LDG DG Sbjct: 214 NAETRQFRLVRSDLFSEFAAERYDVIVSNPPYIPSGEVEKLEPEVREHEPRLALDGSADG 273 Query: 203 LSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 L YR +A+ +HL + G EIG Q V + + + KD G DRV+ Sbjct: 274 LHFYRILAEECRKHLKEGGRVYFEIGCEQASAVTELLAQQGYTKIQVVKDAPGLDRVV 331 >gi|326386587|ref|ZP_08208209.1| HemK family modification methylase [Novosphingobium nitrogenifigens DSM 19370] gi|326208902|gb|EGD59697.1| HemK family modification methylase [Novosphingobium nitrogenifigens DSM 19370] Length = 282 Score = 248 bits (634), Expect = 6e-64, Method: Composition-based stats. Identities = 74/262 (28%), Positives = 122/262 (46%), Gaps = 14/262 (5%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A D+ + G+S +++ D + R + HE + I G ++F+ Sbjct: 27 ARLDAEVLMAHALGVSRSDLVLRHMR---DSVPATFAPLVARRMTHEPVAYITGHQEFWG 83 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + + + PR +TE LV++A R RI+DLGTG+GA+ A L P Sbjct: 84 LDFLVGPEVLIPRGDTETLVEAA----ETAFTARPPQRIIDLGTGSGALLCAALSIWPGA 139 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIESV 178 +G+G+D S AL +A++NA G+ +R + +DW + G FD++++NPPY+E+ Sbjct: 140 QGIGIDRSQGALAMARANANRLGLGQRARIIAADWHTPGWARDLGRFDLVLANPPYVETS 199 Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238 L V D +P +L G +GL YR + + L DG+ +EIG+ Q V + Sbjct: 200 --ADLDRSVVDHEPHSALFAGAEGLDDYRVLVPQLGDLLAPDGIAMIEIGWTQGEAVCAL 257 Query: 239 FESRKLFLVNAFKDYGGNDRVL 260 D GG R + Sbjct: 258 ARQGGFA-AQVHTDLGGRPRAV 278 >gi|325830609|ref|ZP_08164030.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Eggerthella sp. HGA1] gi|325487355|gb|EGC89797.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Eggerthella sp. HGA1] Length = 345 Score = 248 bits (634), Expect = 6e-64, Method: Composition-based stats. Identities = 75/313 (23%), Positives = 125/313 (39%), Gaps = 55/313 (17%) Query: 7 SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66 + L TGLS ++ + + L +R L + R K E + I G F ++ + Sbjct: 30 AQWLLSEATGLSRIELYANFEQPLSMGERDVLRAYVTRRGKGEPLQYITGEVGFRHITVK 89 Query: 67 LSSDTFEPRPETELLVDSALAFSLPR---------------------------------- 92 + PRPETE+LV ALA Sbjct: 90 VRPGVLIPRPETEVLVSEALALLPAAPKRVAQHAWSEDDLPPATWPEGEAGEQRPERTAD 149 Query: 93 -----------------IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135 + + + + DL TG+G + ++ E P + + DI+ +A+ Sbjct: 150 QGVAEDGSTPGVAPGEPVPEPAPLLVADLCTGSGCIACSVAYEHPLARVMATDIAPEAVA 209 Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIESVIVDCLGLEVRDFD 191 +A+ N + +R + L D V+ G FD++VSNPPY+ + ++D + EV +F+ Sbjct: 210 LARDNVSALDLGDRVEVLSCDLGEGVDPALMGAFDLVVSNPPYVPTAVMDDIPREVAEFE 269 Query: 192 PRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK 251 P ++LDGG DGL R + R L + G + E+ + R+ E V Sbjct: 270 PALALDGGADGLDVLRRLLPWCRRALKEGGGFAFELHETCLGEAARLAEEAGFSDVRVTA 329 Query: 252 DYGGNDRVLLFCR 264 D G RVL + Sbjct: 330 DLAGRPRVLTARK 342 >gi|320120317|gb|ADW16126.1| hypothetical protein HMPREF0389_01680 [Filifactor alocis ATCC 35896] Length = 279 Score = 248 bits (634), Expect = 6e-64, Method: Composition-based stats. Identities = 66/260 (25%), Positives = 117/260 (45%), Gaps = 5/260 (1%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L V + +++ + + + + + I ++ + FY Sbjct: 24 DAQLLLMYVLQVDKLYLMIHLNEEVPLEKIGIYYELLAERKQSVPIAYLIHKKPFYGRDF 83 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 +S PRP+TE+L++ L I V +++G G+GA+ + LL E+ V Sbjct: 84 FVSPGVLIPRPDTEILIEKTLDV----IPDNKQVSGIEIGCGSGAISITLLLENRLLNMV 139 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLG 184 DI +EI NA N V R +++D F+ + FD I+SNPPYI L Sbjct: 140 ATDIEAIPIEITSKNANLNNVQNRLRLIKTDLFNGIPSKQFDFIISNPPYIPYDDSTKLM 199 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 +V D++P+++L +G+ +R I + + L +DG + EIG +Q + + Sbjct: 200 KDVIDYEPKVALFAEENGIFFFRKILEDGKKFLKEDGFVAFEIGCSQAKQIRELCLKEGF 259 Query: 245 FLVNAFKDYGGNDRVLLFCR 264 V +D G DRV++ R Sbjct: 260 HKVLIHRDLHGLDRVVIAFR 279 >gi|329117399|ref|ZP_08246116.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptococcus parauberis NCFD 2020] gi|326907804|gb|EGE54718.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptococcus parauberis NCFD 2020] Length = 282 Score = 248 bits (634), Expect = 6e-64, Method: Composition-based stats. Identities = 78/248 (31%), Positives = 121/248 (48%), Gaps = 8/248 (3%) Query: 16 GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75 S+ ++ + + + + + H S I G F ++ L++ PR Sbjct: 33 KWSTLDYLLHQNKEVSTGDLELFQSIMTQLKTHRSPQYITGNAYFRDLILSVDERVLIPR 92 Query: 76 PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135 PETE LV L +R+LD+GTG+GA+ L L KE P ++ DIS AL Sbjct: 93 PETEELVSLILEEH-----SDQSLRVLDIGTGSGAIALGLKKERPNWQIDAADISLDALS 147 Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195 +A+ N + + L SD FS++ +D+IVSNPPYI D +GL V +P ++ Sbjct: 148 LAQENGRALDLE--INWLHSDLFSNILDKYDIIVSNPPYIAFEDKDEVGLNVWHSEPHLA 205 Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDYG 254 L +GL+ YR I + S +L +DG EIGY Q D+ + E+ V +DY Sbjct: 206 LFADDNGLAIYRAILEQASHYLTEDGAIYFEIGYKQGQDLKELAEANFPQCRVRLLQDYF 265 Query: 255 GNDRVLLF 262 G DR+++ Sbjct: 266 GKDRMVVI 273 >gi|145588323|ref|YP_001154920.1| HemK family modification methylase [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145046729|gb|ABP33356.1| [protein release factor]-glutamine N5-methyltransferase [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 283 Score = 248 bits (634), Expect = 7e-64, Method: Composition-based stats. Identities = 80/265 (30%), Positives = 130/265 (49%), Gaps = 7/265 (2%) Query: 6 DSHSFLCRVT----GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 ++ + + L ++ D L+ + + L E I ++G R F+ Sbjct: 20 EARILMAHILEKHYALPRSALLSRDDMALEVQALAHWKELESKRLDGEPIAYLIGKRGFH 79 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 N+ L ++ PR ETELLVD L + + +V++LDLGTG+GA+ LAL E+ Sbjct: 80 NIELQVAPGVLIPRAETELLVDIGLKEIARLTDNQKMVKVLDLGTGSGAIALALTHEASN 139 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVI 179 D S AL IA+SNA + R Q +W+ ++ +FD+I+SNPPYI + Sbjct: 140 ISVTATDQSLDALAIARSNAHYLELENRVCFAQGNWYEAISKNDVFDIILSNPPYIANHD 199 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 ++R F+P +L GL+ TI G HLN +GL +VE G++Q VV + Sbjct: 200 PHLTQGDLR-FEPLSALTDHSTGLTCLETIIFGAKAHLNTEGLLAVEHGFDQSEAVVELM 258 Query: 240 ESRKLFLVNAFKDYGGNDRVLLFCR 264 + +L + D G++RV+ + Sbjct: 259 RTAQLKDIQIHLDLAGHNRVVSGRK 283 >gi|314937738|ref|ZP_07845060.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecium TX0133a04] gi|314942364|ref|ZP_07849211.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecium TX0133C] gi|314952117|ref|ZP_07855136.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecium TX0133A] gi|314992372|ref|ZP_07857804.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecium TX0133B] gi|314997441|ref|ZP_07862388.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecium TX0133a01] gi|313588450|gb|EFR67295.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecium TX0133a01] gi|313593097|gb|EFR71942.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecium TX0133B] gi|313595736|gb|EFR74581.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecium TX0133A] gi|313598877|gb|EFR77722.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecium TX0133C] gi|313642876|gb|EFS07456.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecium TX0133a04] Length = 279 Score = 248 bits (634), Expect = 7e-64, Method: Composition-based stats. Identities = 74/255 (29%), Positives = 119/255 (46%), Gaps = 9/255 (3%) Query: 8 HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67 ++ + + + ++ + + L +LG+ DFY+ RL + Sbjct: 28 QFLFLERKQWKKLDWLLHMNEEISEEEQRLIETDLRLLLADHPPQYLLGYADFYDHRLKV 87 Query: 68 SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 + T PRPETE LV+ L + + ++D+GTGTGA+ ++L + V Sbjct: 88 TEATLIPRPETEELVEWCLDET-----PGVPLEVIDIGTGTGAIAISLKAARKNWHISAV 142 Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLE 186 D+S +ALE+AK NA G + D V + FDVI+SNPPYI + + Sbjct: 143 DLSEEALEVAKENAQKEGT--KISFYHGDTLGPVMDQQFDVIISNPPYISRNEWELMDES 200 Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLF 245 VR F+P+++L DGL+ Y IA L +G +EIG+ Q V + F+ Sbjct: 201 VRSFEPKMALFAENDGLAIYEKIAVEAPSVLKSNGKIFLEIGFRQGEAVKKKFQQAFPDK 260 Query: 246 LVNAFKDYGGNDRVL 260 V KD GN+R++ Sbjct: 261 KVAIKKDLFGNERMI 275 >gi|163783633|ref|ZP_02178622.1| protoporphyrinogen oxidase [Hydrogenivirga sp. 128-5-R1-1] gi|159881126|gb|EDP74641.1| protoporphyrinogen oxidase [Hydrogenivirga sp. 128-5-R1-1] Length = 270 Score = 248 bits (634), Expect = 7e-64, Method: Composition-based stats. Identities = 79/263 (30%), Positives = 119/263 (45%), Gaps = 7/263 (2%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 + RD L + ++ + + V + + + ++G DFY Sbjct: 13 ELRRDGEIILAHLLKRRPGELYLLSEEV-PEEVVKKFKRLMKLRERGFPTAYLIGEWDFY 71 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 + PRPETELLV+ +L I + ++G GTG + + LL E Sbjct: 72 GRTFKVKEGVLIPRPETELLVEK----TLELIPADKEMEGFEVGGGTGCISITLLLERGL 127 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIV 180 + D++ A+E+ K NA +GV R + + D FS V+G FD IVSNPPYI Sbjct: 128 LRMAVDDVNPTAVELMKENAKIHGVDYRLEVFEGDMFSPVKGRRFDFIVSNPPYIPENFW 187 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 + L EVR + R +L GG G Y A V RHL G ++EIG++Q V + + Sbjct: 188 ERLPPEVRR-EGREALIGGEKGYEFYERFAKEVPRHLKGGGFVALEIGHDQGRVVEELLK 246 Query: 241 SRKLFLVNAFKDYGGNDRVLLFC 263 V +KDY G DRV++ Sbjct: 247 GAGFERVIIYKDYSGQDRVVIAW 269 >gi|295090781|emb|CBK76888.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Clostridium cf. saccharolyticum K10] Length = 338 Score = 248 bits (633), Expect = 7e-64, Method: Composition-based stats. Identities = 77/298 (25%), Positives = 121/298 (40%), Gaps = 44/298 (14%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLD----DRQRFFLTNAIVRSLKHESIHRILGW 57 +A D+ + ++D + + ++ I + + ILG Sbjct: 39 EAQLDAWYLFSESFPIDRVHFLMDRNRPMHREIFEKGWPLFAERIEKRASRIPLQHILGS 98 Query: 58 RDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117 ++F + ++ PR +TE LV+ L R ILD+ TG+G + L+L Sbjct: 99 QEFMGLSFRVNEHVLIPRQDTETLVEEVLRDCPDR-----NADILDMCTGSGCIGLSLAV 153 Query: 118 ESPFFKGVGVDISCKALEIAKSNAVT---------------------------------- 143 + D+S AL +A NA Sbjct: 154 LGRYRSVTAADVSEDALRVAAGNAKRLFLIQKDVVRAESKNFPGLPLRTELTVWAGKNRE 213 Query: 144 NGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202 N + +F ++SD FS +DVIVSNPPYI S V+ L EVR+ +PR++LDG DG Sbjct: 214 NAETRQFRLVRSDLFSEFAAERYDVIVSNPPYIPSGEVEKLEPEVREHEPRLALDGSADG 273 Query: 203 LSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 L YR +A+ ++L + G EIG Q V + + + KD G DRV+ Sbjct: 274 LHFYRILAEECRKYLKEGGRVYFEIGCEQASAVTELLAQQGYTKIQVVKDAPGLDRVV 331 >gi|239907763|ref|YP_002954504.1| protein methyltransferase hemK [Desulfovibrio magneticus RS-1] gi|239797629|dbj|BAH76618.1| protein methyltransferase hemK [Desulfovibrio magneticus RS-1] Length = 301 Score = 248 bits (633), Expect = 7e-64, Method: Composition-based stats. Identities = 75/256 (29%), Positives = 120/256 (46%), Gaps = 6/256 (2%) Query: 7 SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66 + L + GL +I+ D L + + + R K E + ILG R+FY + Sbjct: 45 AQLLLSQALGLDRLGLILAMDRPLTPEELDLVRPLVARRGKGEPVAYILGEREFYGLDFA 104 Query: 67 LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126 ++ T PRPETEL++D SL ++ DLGTG+G + + L P G+ Sbjct: 105 VTPATLIPRPETELIID----RSLELFPAGELTSFADLGTGSGCLAVTLAVRFPGATGLA 160 Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDW--FSSVEGLFDVIVSNPPYIESVIVDCLG 184 +D+S +AL +A+ NAV + V++R ++D+ + + ++VSNPPY+ + Sbjct: 161 LDLSPEALAVARQNAVRHQVAQRLTFFEADFADLPAHGEGYGLVVSNPPYVSAAEYRECS 220 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 EVR+F+P +L G GL T+A L G VEIG+ Q Sbjct: 221 REVREFEPSSALTPGETGLEAVPTVARAALSRLAPGGTLLVEIGWKQGPAAAAFLAEAGF 280 Query: 245 FLVNAFKDYGGNDRVL 260 V +D G +RV+ Sbjct: 281 TDVVVRRDLAGLERVV 296 >gi|33519809|ref|NP_878641.1| putative protoporphyrinogen oxidase [Candidatus Blochmannia floridanus] gi|33504154|emb|CAD83416.1| methylase of polypeptide chain release factors [Candidatus Blochmannia floridanus] Length = 281 Score = 248 bits (633), Expect = 8e-64, Method: Composition-based stats. Identities = 73/261 (27%), Positives = 124/261 (47%), Gaps = 7/261 (2%) Query: 1 MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60 + RDS L VT S Q++ ++ L Q L + I R K E I ++G ++F Sbjct: 19 LSPRRDSEIILEIVTKKSREQLLTFEETTLTPEQIKKLQSLIDRRKKSEPIAYLVGSKEF 78 Query: 61 YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120 +++ +S F PR +TE L++ L I + +++LDLG+G G++ LAL E P Sbjct: 79 WSLSFKISPGVFIPRTDTECLIEEVLNL----IPDCNHLKVLDLGSGVGSIALALASERP 134 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVI 179 + G+D +A+ +A N + + QS+WF+ ++ F +IVSNPPYI Sbjct: 135 TWNITGIDQQQQAVILAIKN-QKSYKFRNVEFKQSNWFTKIKKNKFHLIVSNPPYINEHD 193 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 + L ++ F+P+ +L GL I HL G +E G+NQ + + Sbjct: 194 LHFLSQDI-HFEPKSALVSPYYGLKDLIIICKQSINHLYPMGWLCLEHGWNQGKYIRTLL 252 Query: 240 ESRKLFLVNAFKDYGGNDRVL 260 + ++ DY +R+ Sbjct: 253 HAIGFNNIHTILDYHQYERIT 273 >gi|317487896|ref|ZP_07946488.1| hypothetical protein HMPREF1023_00186 [Eggerthella sp. 1_3_56FAA] gi|316913022|gb|EFV34539.1| hypothetical protein HMPREF1023_00186 [Eggerthella sp. 1_3_56FAA] Length = 331 Score = 248 bits (633), Expect = 8e-64, Method: Composition-based stats. Identities = 75/313 (23%), Positives = 125/313 (39%), Gaps = 55/313 (17%) Query: 7 SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66 + L TGLS ++ + + L +R L + R K E + I G F ++ + Sbjct: 16 AQWLLSEATGLSRIELYANFEQPLSMGERDVLRAYVTRRGKGEPLQYITGEVGFRHITVK 75 Query: 67 LSSDTFEPRPETELLVDSALAFSLPR---------------------------------- 92 + PRPETE+LV ALA Sbjct: 76 VRPGVLIPRPETEVLVSEALALLPAAPKRVAQHAWSEDDLPPATWPEGEAGEQRPERTAD 135 Query: 93 -----------------IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135 + + + + DL TG+G + ++ E P + + DI+ +A+ Sbjct: 136 QGVAEDGSTPGVAPGEPVPEPAPLLVADLCTGSGCIACSVAYEHPLARVMATDIAPEAVA 195 Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIESVIVDCLGLEVRDFD 191 +A+ N + +R + L D V+ G FD++VSNPPY+ + ++D + EV +F+ Sbjct: 196 LARDNVSALDLGDRVEVLSCDLGEGVDPALMGAFDLVVSNPPYVPTAVMDDIPREVAEFE 255 Query: 192 PRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK 251 P ++LDGG DGL R + R L + G + E+ + R+ E V Sbjct: 256 PALALDGGADGLDVLRRLLPWCRRALKEGGGFAFELHETCLGEAARLAEEAGFSDVRVTA 315 Query: 252 DYGGNDRVLLFCR 264 D G RVL + Sbjct: 316 DLAGRPRVLTARK 328 >gi|256390408|ref|YP_003111972.1| modification methylase, HemK family [Catenulispora acidiphila DSM 44928] gi|256356634|gb|ACU70131.1| modification methylase, HemK family [Catenulispora acidiphila DSM 44928] Length = 303 Score = 248 bits (633), Expect = 8e-64, Method: Composition-based stats. Identities = 75/266 (28%), Positives = 110/266 (41%), Gaps = 10/266 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 D+ V G+ + PD D R I R E + I G F Sbjct: 43 PRHDAEELAAWVHGVRRTDLHRVPDHDFDAR----YWEVIARRANREPLQHITGAAYFRY 98 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L + F PRPETE++V A+ + I+DL TG+GA+ L++ +E P Sbjct: 99 LELAVGPGVFVPRPETEVMVGWAIDKLRALDVAEPL--IVDLCTGSGAIALSIAQEVPRA 156 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW---FSSVEGLFDVIVSNPPYIESVI 179 + V++S A A N + ER +D ++G DV+VSNPPYI Sbjct: 157 RVHAVELSEDAYTWASRNIAASEAGERVTLHLADAVTALPELDGRVDVVVSNPPYIPLTE 216 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 + + E RD DP ++L G DGL R + R L G + E Q +V RIF Sbjct: 217 WEYVAPEARDHDPELALFSGPDGLDLIRGLERTAQRLLKPGGWSAFEHSDKQGGEVQRIF 276 Query: 240 -ESRKLFLVNAFKDYGGNDRVLLFCR 264 E R + +D R + + Sbjct: 277 LEERGWAEASDHRDLTNRPRFVTARK 302 >gi|126663423|ref|ZP_01734420.1| possible protoporphyrinogen oxidase [Flavobacteria bacterium BAL38] gi|126624371|gb|EAZ95062.1| possible protoporphyrinogen oxidase [Flavobacteria bacterium BAL38] Length = 293 Score = 248 bits (633), Expect = 8e-64, Method: Composition-based stats. Identities = 74/263 (28%), Positives = 126/263 (47%), Gaps = 13/263 (4%) Query: 9 SFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLS 68 + L V ++P+ L + + + + + I I G FY ++ ++ Sbjct: 29 ILTEYLHNLKRVDVALNPNFELSEDDVEKWNSILADLQQEKPIQYITGEAWFYGLQFEVN 88 Query: 69 SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128 +T PRPETE LV+ L + + ILD+GTG+G + ++L P +D Sbjct: 89 ENTLIPRPETEELVEWILNSPITHYPL--PITILDIGTGSGCIPISLKANLPQANVSAID 146 Query: 129 ISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGL-------FDVIVSNPPYIESV 178 +S KALE+AK NAV+N V F + L+ + S + F++IVSNPPY+ ++ Sbjct: 147 VSEKALEVAKRNAVSNKVEINFIQTNILEVEDLSQLPSPNFHHPSSFNIIVSNPPYVRNL 206 Query: 179 IVDCLGLEVRDFDPRISLDGGI-DGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237 + V D++P ++L D L YR IA ++L+ +GL EI + V Sbjct: 207 EKQEIKKNVLDYEPHLALFVENTDALLFYRKIAQLALKNLSPNGLLFFEINQYLGKETVE 266 Query: 238 IFESRKLFLVNAFKDYGGNDRVL 260 + ++ ++ KD GNDR++ Sbjct: 267 LLKNLGFKNIDLKKDIYGNDRMI 289 >gi|119477465|ref|ZP_01617656.1| Modification methylase HemK [marine gamma proteobacterium HTCC2143] gi|119449391|gb|EAW30630.1| Modification methylase HemK [marine gamma proteobacterium HTCC2143] Length = 285 Score = 248 bits (633), Expect = 8e-64, Method: Composition-based stats. Identities = 79/259 (30%), Positives = 117/259 (45%), Gaps = 7/259 (2%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A+ D LC + P++ + + R + E I I G R F++ Sbjct: 21 AMLDVELLLCFCLEKRRSFLRAWPEAEVSTEHERHFLTLLERRIVGEPIAYITGERGFWS 80 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +++ T PRPETELLV+ +L + ILDLGTG+GA+ LAL E + Sbjct: 81 LDLQVNASTLIPRPETELLVEK----TLELMSDAASADILDLGTGSGAIALALASEKSGW 136 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVD 181 V D+ A+ +A+SN + L+S+WF ++ FDVIVSNPPYI+ Sbjct: 137 CIVASDVQPNAVALAESNKAKYSL-NNVTVLESNWFDAIGNQCFDVIVSNPPYIDPQDNH 195 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +V F+PR +L GL+ IAD +L G +E GYNQ V + Sbjct: 196 LEEGDV-SFEPRSALVAENHGLADLEHIADCAGAYLKDRGWLLLEHGYNQADAVQALLLR 254 Query: 242 RKLFLVNAFKDYGGNDRVL 260 + D G R+ Sbjct: 255 AGFTKIFTAVDLSGWGRLT 273 >gi|88803654|ref|ZP_01119178.1| putative protoporphyrinogen oxidase [Polaribacter irgensii 23-P] gi|88780387|gb|EAR11568.1| putative protoporphyrinogen oxidase [Polaribacter irgensii 23-P] Length = 301 Score = 248 bits (633), Expect = 9e-64, Method: Composition-based stats. Identities = 82/266 (30%), Positives = 123/266 (46%), Gaps = 11/266 (4%) Query: 9 SFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLS 68 + L +++PD ++ D L I R K E I ILG +FY + ++ Sbjct: 35 ILMEEKLQLKRIDTVLNPDLIIGDVLVTSLKKIIDRLQKEEPIQYILGNTEFYGLPFLVN 94 Query: 69 SDTFEPRPETELLVDSALAFSLPRIEKRD---------VVRILDLGTGTGAVCLALLKES 119 +T PRPETE LV L + + ILD+GTGTG + ++L K S Sbjct: 95 KNTLIPRPETEELVSWVLHEIKEIHGEHKNKATNAIETPLTILDIGTGTGCISVSLAKNS 154 Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179 P + +D S AL IAK NA+ N V+ F L + + FD+I+SNPPY+ + Sbjct: 155 PQSEITAIDNSATALHIAKKNALLNNVAVNFIQLDILKTTELPQKFDIIISNPPYVRELE 214 Query: 180 VDCLGLEVRDFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238 + V +P ++L + L Y IAD + L K+GL EI + +++ Sbjct: 215 KVEINKNVLANEPHLALFVSDENPLLFYDKIADLAIQGLTKNGLLFFEINQYLAKETIKM 274 Query: 239 FESRKLFLVNAFKDYGGNDRVLLFCR 264 + + KD GNDR+LL CR Sbjct: 275 LTKKGFHSIQLKKDLFGNDRMLL-CR 299 >gi|313896051|ref|ZP_07829605.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Selenomonas sp. oral taxon 137 str. F0430] gi|312975476|gb|EFR40937.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Selenomonas sp. oral taxon 137 str. F0430] Length = 295 Score = 248 bits (633), Expect = 9e-64, Method: Composition-based stats. Identities = 84/263 (31%), Positives = 130/263 (49%), Gaps = 5/263 (1%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 D+ L V G + V D L+ + + + H + +LG R+F Sbjct: 28 PRLDAEVLLAAVLGKDRMYLYVHFDEPLEPAELSTFRSYVKERGAHTPMAYVLGRREFMG 87 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALLKES-- 119 + ++ DT PRP+TE+LV +A+ F R + I DLGTGTGA+ L++L + Sbjct: 88 LEFCVTRDTLIPRPDTEILVQTAVDFLRARRAAGADAMSIADLGTGTGAIALSVLYHADV 147 Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESV 178 + VDIS A +A+ NA G++ER + D + + G +D+IVSNPPYI + Sbjct: 148 SDLRADAVDISPGAAAVARENAAQLGLAERCSVREGDLLAPLAGRTYDMIVSNPPYIPAG 207 Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238 + L +VR ++P ++LDGG DGL YR + L + G +VE+G Q DV + Sbjct: 208 DIAELMTDVRAYEPHLALDGGADGLDFYRRMMADAPAMLKEGGAIAVEVGIGQAADVAAL 267 Query: 239 FESRK-LFLVNAFKDYGGNDRVL 260 E + KD G +RV+ Sbjct: 268 AERHPRIVRTETKKDLAGIERVV 290 >gi|254374924|ref|ZP_04990405.1| modification methylase [Francisella novicida GA99-3548] gi|151572643|gb|EDN38297.1| modification methylase [Francisella novicida GA99-3548] Length = 284 Score = 247 bits (632), Expect = 1e-63, Method: Composition-based stats. Identities = 81/258 (31%), Positives = 130/258 (50%), Gaps = 6/258 (2%) Query: 4 LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63 D +C V G+ + ++ D LD + I+R L E + ILG++ F+N Sbjct: 25 KHDLQMIICDVLGVDKTYLYINSDKQLDKNTLKKIDEKILRLLAGEPLAYILGYKYFWNQ 84 Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 +L ++ DT PR +TE +V + L K ++ILDLGTGTGA+ LAL E + Sbjct: 85 KLYVTKDTLIPRADTETVVATVLDDIQ---NKDAQLKILDLGTGTGAIALALAAELANSQ 141 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDC 182 V VD+ ++L++AK NA N ++ +QS W+++++ FD+IVSNPPYI+ Sbjct: 142 VVAVDLYQQSLDVAKKNAQANNIT-NVKFIQSSWYTNLDTDKFDIIVSNPPYIDLADT-N 199 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 + V+D++P +L +GL+ + I LN G +E G+ Q + +F Sbjct: 200 IDQSVKDYEPARALFAADNGLADIKIIISQSKYFLNPRGFIYIEHGFTQADAITVLFSQY 259 Query: 243 KLFLVNAFKDYGGNDRVL 260 + KD NDR Sbjct: 260 NFTDIKTVKDLNNNDRCT 277 >gi|295115023|emb|CBL35870.1| protein-(glutamine-N5) methyltransferase, release factor-specific [butyrate-producing bacterium SM4/1] Length = 338 Score = 247 bits (632), Expect = 1e-63, Method: Composition-based stats. Identities = 78/298 (26%), Positives = 121/298 (40%), Gaps = 44/298 (14%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLD----DRQRFFLTNAIVRSLKHESIHRILGW 57 +A D+ + ++D + + ++ I + + ILG Sbjct: 39 EAQLDAWYLFSESFPIDRVHFLIDRNRPMHREIFEKGWPLFAERIEKRASRIPLQHILGS 98 Query: 58 RDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117 ++F + ++ PR +TE LV+ L R ILD+ TG+G + L+L Sbjct: 99 QEFMGLSFRVNEHVLIPRQDTETLVEEVLRDCPDR-----NADILDMCTGSGCIGLSLAV 153 Query: 118 ESPFFKGVGVDISCKALEIAKSNAVT---------------------------------- 143 + D+S AL +A NA Sbjct: 154 LGRYRSVTAADVSEDALRVAAGNAKRLFLIQKDVVRAESKNFPGLPLRTELTVWAGKNRE 213 Query: 144 NGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202 N + +F ++SD FS +DVIVSNPPYI S V+ L EVR+ +PR++LDG DG Sbjct: 214 NAETRQFRLVRSDLFSEFAAERYDVIVSNPPYIPSGEVEKLEPEVREHEPRLALDGSADG 273 Query: 203 LSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 L YR +A+ +HL + G EIG Q V + + + KD G DRV+ Sbjct: 274 LHFYRILAEECRKHLKEGGRVYFEIGCEQASAVTELLAQQGYTKIQVVKDAPGLDRVV 331 >gi|260891993|ref|YP_003238090.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Ammonifex degensii KC4] gi|260864134|gb|ACX51240.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Ammonifex degensii KC4] Length = 287 Score = 247 bits (632), Expect = 1e-63, Method: Composition-based stats. Identities = 74/267 (27%), Positives = 127/267 (47%), Gaps = 11/267 (4%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 +A ++ L +T + D + + + R L E + ++G ++F+ Sbjct: 21 EARLEAEVLLAHLTKRDRLFLYGAADLSVPFLTKLRFWELVGRRLAGEPLAYLIGKKEFW 80 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 + L ++ PRPETELLV++ L +++ + ++D+GTG+GAV ++ P Sbjct: 81 GLELEVTPAVLVPRPETELLVETGLE----KVKGKGSPILVDVGTGSGAVAVSWAVSLPQ 136 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-----GLFDVIVSNPPYIE 176 + + +DIS +AL A+ NA +GV ER + D S ++ G DV+ +N PYI Sbjct: 137 ARLLALDISPEALACAQRNARRHGVEERITFMAGDLLSPLKETPVAGKVDVVGANLPYIP 196 Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236 + L EVR +PR +LDGG DGL+ YR + + L G EI Q+ + Sbjct: 197 RAFLPALSREVRR-EPRQALDGGTDGLAFYRRLVLQAKQVLRPGGYLLCEIAPWQRSGAL 255 Query: 237 RIFESRKLFLVNAFKDYGGNDRVLLFC 263 +F + +D G R++L Sbjct: 256 ELF-DEDWDELEVKRDLAGRARLVLAR 281 >gi|121608525|ref|YP_996332.1| HemK family modification methylase [Verminephrobacter eiseniae EF01-2] gi|121553165|gb|ABM57314.1| modification methylase, HemK family [Verminephrobacter eiseniae EF01-2] Length = 294 Score = 247 bits (632), Expect = 1e-63, Method: Composition-based stats. Identities = 76/260 (29%), Positives = 110/260 (42%), Gaps = 12/260 (4%) Query: 3 ALRDSHSFLCRVTGLS---SHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRD 59 A D+ L G + ++ L R E + + G ++ Sbjct: 28 ARIDAQLLLLHQLGRADAGRAWLLAHDSDALAPALHAQFLALCRRRAAGEPVAYLTGRKE 87 Query: 60 FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119 FY + L + + +PRP+TE LVD AL P R+LDLGTG+GA+ LAL + Sbjct: 88 FYGLPLAIDARVLDPRPDTETLVDWALEVIAPL----PAPRVLDLGTGSGAIALALQRHC 143 Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179 P + +D S AL +A++NA G+ Q W S FD IVSNPPY+ + Sbjct: 144 PGAWILAIDASADALAVARANAGRLGLP--VQLAQGHWLSGAPAGFDAIVSNPPYLGAQD 201 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 +PR +L G DGL R+I HL G +E G++Q V + Sbjct: 202 PHL---AALAHEPRQALVSGADGLQDIRSIIGQAPGHLAAGGWLLLEHGHDQAAAVHALL 258 Query: 240 ESRKLFLVNAFKDYGGNDRV 259 +R V + D G R Sbjct: 259 SARGFARVQSRADLAGIARC 278 >gi|224536351|ref|ZP_03676890.1| hypothetical protein BACCELL_01225 [Bacteroides cellulosilyticus DSM 14838] gi|224522048|gb|EEF91153.1| hypothetical protein BACCELL_01225 [Bacteroides cellulosilyticus DSM 14838] Length = 278 Score = 247 bits (632), Expect = 1e-63, Method: Composition-based stats. Identities = 78/265 (29%), Positives = 114/265 (43%), Gaps = 8/265 (3%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 +A S C + G + + D +L ++ L + + R E I ILG F Sbjct: 20 EAGNLSRIICCEILGQQTVDYYLGKDIILSVKEEQELESILARLHNFEPIQYILGEARFL 79 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 ++ PRPETE LV+ L P V R+LD+GTG+G + ++L KE P Sbjct: 80 GRTFRVTPGVLIPRPETEELVEMMLKELSP------VSRVLDVGTGSGCIAISLAKELPE 133 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS-VEGLFDVIVSNPPYIESVIV 180 + D+S +AL IA +N+ S RF+ + V +DVIVSNPPY+ Sbjct: 134 SQVTAWDVSGEALSIAAANSKALQASVRFEQRDVLTYEPCVADCYDVIVSNPPYVTEAEK 193 Query: 181 DCLGLEVRDFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 + V D++P ++L D L YR IA L G EI D V + Sbjct: 194 QEMEHNVLDWEPSLALFVPDTDPLRFYRRIAVLGLEMLTSGGKLYFEINRAFGKDTVAML 253 Query: 240 ESRKLFLVNAFKDYGGNDRVLLFCR 264 V KD NDR ++ + Sbjct: 254 CETGYRAVRLQKDISHNDRFVIAEK 278 >gi|283856489|ref|YP_163245.2| Modification methylase HemK family protein [Zymomonas mobilis subsp. mobilis ZM4] gi|283775493|gb|AAV90134.2| Modification methylase HemK family protein [Zymomonas mobilis subsp. mobilis ZM4] Length = 286 Score = 247 bits (632), Expect = 1e-63, Method: Composition-based stats. Identities = 85/268 (31%), Positives = 140/268 (52%), Gaps = 15/268 (5%) Query: 1 MQALRDSHSFLCRVTGLSSHQVIV----DPDSVLDDRQRFFLTNAIVRSLKHESIHRILG 56 M A D+ + G+ +++ + ++ L AI R ++E + ILG Sbjct: 30 MTARLDTELLMAHSLGIERDALLLGSWGEKEAPLS------FFEAIKRRKQNEPVAYILG 83 Query: 57 WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116 +RDF+ +RLT++ D PRP++E L+++A+A+ R + ILDLGTG+GA+ LA L Sbjct: 84 YRDFWTLRLTVTPDVLIPRPDSETLIETAIAYF--REQAFLPENILDLGTGSGALLLAAL 141 Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE 176 E KG+GVD S +A++IA+ NA G R + W ++ FD+++ NPPYI Sbjct: 142 DEWKDAKGLGVDASPEAIKIARLNADKCGALPRVEFKIGHWGRGIQQKFDLLLCNPPYIA 201 Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236 + + +V ++P ++L G +GL YR I G+ L + G+ +EIG++Q +V Sbjct: 202 RDAM--MPADVLHYEPHLALFSGDEGLDDYREIIPGIPSLLTERGIACLEIGFDQAENVS 259 Query: 237 RIFESRKLFLVNAFKDYGGNDRVLLFCR 264 I + L F D R +L R Sbjct: 260 MIAKETGLRS-RIFYDLEQRPRCVLLSR 286 >gi|319947034|ref|ZP_08021268.1| protein-(glutamine-N5) methyltransferase [Streptococcus australis ATCC 700641] gi|319747082|gb|EFV99341.1| protein-(glutamine-N5) methyltransferase [Streptococcus australis ATCC 700641] Length = 278 Score = 247 bits (632), Expect = 1e-63, Method: Composition-based stats. Identities = 74/260 (28%), Positives = 119/260 (45%), Gaps = 11/260 (4%) Query: 6 DSHSF--LCRVT-GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 ++ S R + ++ ++ + L + + +H I+G DF Sbjct: 20 EAESLSFAYRALKNWTFTDFVLALQKEVEVEDQALLDSIFEQLKQHIPAQYIIGSADFCG 79 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 T+ PRPETE LV L + + +R+LD+GTG+GA+ ++L + Sbjct: 80 HVFTVDERVLIPRPETEELVALILEEN-----DGEPLRVLDIGTGSGAIAISLALARLNW 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182 + D+S +ALE+A+ NA N + D SD + G +D+IVSNPPYI ++ Sbjct: 135 QVQASDVSEEALELAQENA--NQLEAVVDFKTSDVLDQIAGSYDLIVSNPPYISRDDLEE 192 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 +G V +P ++L DG + Y IA L DG +EIGY Q V +F+ Sbjct: 193 VGANVLASEPHLALFADRDGYAIYEKIAQQAPNVLTPDGKIYLEIGYKQGKKVKELFQEA 252 Query: 243 -KLFLVNAFKDYGGNDRVLL 261 V KD G DR+++ Sbjct: 253 FPNKRVRVLKDQFGQDRMVV 272 >gi|15616336|ref|NP_244641.1| protoporphyrinogen oxidase [Bacillus halodurans C-125] gi|10176398|dbj|BAB07493.1| protoporphyrinogen oxidase [Bacillus halodurans C-125] Length = 289 Score = 247 bits (632), Expect = 1e-63, Method: Composition-based stats. Identities = 77/261 (29%), Positives = 119/261 (45%), Gaps = 7/261 (2%) Query: 7 SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66 + L + + + LD L + + ++G FY + Sbjct: 24 AEMLLRHYLQMDRARFLASFHEELDGELFQRLEEDLAAHASGVPVQHLIGVESFYGRQFQ 83 Query: 67 LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126 + PRPETE LV + L + +K + + ILD+GTG+GA+ + L E Sbjct: 84 VDQHVLIPRPETEELVLAVLKEIRRQFKKEEEITILDIGTGSGAIAVTLALEEERTNVTA 143 Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIVDCL 183 VDIS AL++A NA G + D FDVIVSNPPYI +V D L Sbjct: 144 VDISRDALQVAADNARRLGA--NVQLIHGDLGEPFLKTGERFDVIVSNPPYIPTVEKDTL 201 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN-KDGLCSVEIGYNQKVDVVRIFE-S 241 + VRD +P ++L GG+DGL YR + + + G+ ++EIG Q +DV ++ + + Sbjct: 202 AVHVRDHEPALALFGGVDGLDVYRRLMSQLPALTKEEKGMVALEIGAGQGMDVEKLMQTA 261 Query: 242 RKLFLVNAFKDYGGNDRVLLF 262 V+ D G DR++L Sbjct: 262 YPKAAVDVLYDLNGKDRIVLA 282 >gi|312131682|ref|YP_003999022.1| proteiN-(glutamine-n5) methyltransferase, release factor-specific [Leadbetterella byssophila DSM 17132] gi|311908228|gb|ADQ18669.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Leadbetterella byssophila DSM 17132] Length = 275 Score = 247 bits (631), Expect = 1e-63, Method: Composition-based stats. Identities = 77/262 (29%), Positives = 121/262 (46%), Gaps = 15/262 (5%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 +A + L ++ G+S +++ + + L I R + E I ILG F Sbjct: 22 EAREIAFLLLQKLWGISRTDLLIGETQHVAEE----LDLYIERINQGEPIQYILGEAWFM 77 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 N R ++ PRPETE LV + ++LDLGTG+G + + + E+P Sbjct: 78 NRRFHVNPSVLIPRPETEELV--------THVSALSPKKVLDLGTGSGCIPVNIALENPE 129 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS--VEGLFDVIVSNPPYIESVI 179 + G+DIS ALE AK NA + + +F F + + FD+I+SNPPY++ Sbjct: 130 AEVFGIDISEHALETAKRNAEEHKANVKFALANMLDFQNPFLVQEFDLIISNPPYVKENE 189 Query: 180 VDCLGLEVRDFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238 + V DF+P ++L +D L YR IAD +HL G +EI + + Sbjct: 190 KPEMRKNVLDFEPHLALFVSDLDPLIFYRAIADIAWKHLAPRGALWLEINSYLGKETAEL 249 Query: 239 FESRKLFLVNAFKDYGGNDRVL 260 F + V KD+ G +R L Sbjct: 250 FSQKGYKHVRLLKDFFGKERFL 271 >gi|237715307|ref|ZP_04545788.1| conserved hypothetical protein [Bacteroides sp. D1] gi|262405148|ref|ZP_06081698.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacteroides sp. 2_1_22] gi|294643552|ref|ZP_06721358.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacteroides ovatus SD CC 2a] gi|294807059|ref|ZP_06765878.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacteroides xylanisolvens SD CC 1b] gi|229444616|gb|EEO50407.1| conserved hypothetical protein [Bacteroides sp. D1] gi|262356023|gb|EEZ05113.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacteroides sp. 2_1_22] gi|292641127|gb|EFF59339.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacteroides ovatus SD CC 2a] gi|294445758|gb|EFG14406.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacteroides xylanisolvens SD CC 1b] Length = 278 Score = 247 bits (631), Expect = 1e-63, Method: Composition-based stats. Identities = 79/260 (30%), Positives = 117/260 (45%), Gaps = 12/260 (4%) Query: 9 SFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLS 68 C + GL + + + D +L + ++ L N I R K+E I I G +F ++ Sbjct: 27 LICCDMLGLDALDIYMGKDIILSECKQRELENIIFRLQKNEPIQYIRGVAEFCGRNFKVA 86 Query: 69 SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128 S PRPET LV+ + E + R+LD+GTG+G + ++L K+ P + D Sbjct: 87 SGVLIPRPETAELVELIVE------ENPNARRLLDIGTGSGCIAISLDKKLPDAEVEAWD 140 Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL---FDVIVSNPPYIESVIVDCLGL 185 IS +AL IA+ N + R LQ D + FDVIVSNPPY+ + + Sbjct: 141 ISEEALAIARKNNDA--LEARVRFLQRDVLADDWEKIPSFDVIVSNPPYVTETEKNEMDA 198 Query: 186 EVRDFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 V D++P ++L D L Y IA S L G EI + I E + Sbjct: 199 NVLDWEPGLALFVPDEDPLRFYNRIARLGSELLLPGGKLYFEINQAYGRETAHILEMNQY 258 Query: 245 FLVNAFKDYGGNDRVLLFCR 264 V KD G DR++ R Sbjct: 259 RDVRVIKDIFGKDRIVTANR 278 >gi|227431145|ref|ZP_03913201.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] gi|227353097|gb|EEJ43267.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] Length = 330 Score = 247 bits (631), Expect = 1e-63, Method: Composition-based stats. Identities = 76/253 (30%), Positives = 121/253 (47%), Gaps = 6/253 (2%) Query: 10 FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69 L ++ + + + + + +K++ ILG FY + Sbjct: 78 LLSGALNVNYGMLRANMSRQMPATLAALWPSWVSELVKNKPPQYILGHAPFYGREFMVDE 137 Query: 70 DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129 PRPETE LV+ L + + V +LD+GTG+GA+ L+ E+ KG DI Sbjct: 138 RVLIPRPETEQLVEWILKDA---GNTKHPVSVLDIGTGSGAIIETLMLENDRVKGFAADI 194 Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVR 188 S AL +A+ NA +S ++SD FS++ G FD+IVSNPPYI + + + V Sbjct: 195 SQDALTVAEMNAQRFNLSH-LHFVESDVFSALSGLKFDLIVSNPPYISNSDENEMDDSVL 253 Query: 189 DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLV 247 F+P +L DGL+ Y IA G+ HL + G EIGY Q V ++ ++ + Sbjct: 254 TFEPHTALFAENDGLAIYEKIARGLDAHLTEYGRAYFEIGYKQGKAVQQLLQAALPKAKI 313 Query: 248 NAFKDYGGNDRVL 260 +D+ G DR++ Sbjct: 314 TLRQDFSGLDRMI 326 >gi|27904664|ref|NP_777790.1| hypothetical protein bbp162 [Buchnera aphidicola str. Bp (Baizongia pistaciae)] gi|32129595|sp|Q89AT0|HEMK_BUCBP RecName: Full=Protein methyltransferase hemK homolog gi|27904061|gb|AAO26895.1| HemK [Buchnera aphidicola str. Bp (Baizongia pistaciae)] Length = 277 Score = 247 bits (631), Expect = 1e-63, Method: Composition-based stats. Identities = 78/260 (30%), Positives = 126/260 (48%), Gaps = 6/260 (2%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 D+ L V +I + L L + R + E I ++ ++F+++ Sbjct: 23 LDAEILLSYVLKKCRTWIISNDFIKLTYDNLIDLNVLLQRRMNSEPISYLIHVKEFWSLP 82 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 +S+ T PRP+TE+LV+ AL + ++ ++LDLGTG G++ LAL E K Sbjct: 83 FLVSNSTLIPRPDTEILVEKALIY----LKNLSNAKVLDLGTGCGSIALALASERLDCKI 138 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184 +G+D +++ IA NA + L S WFS V+ +FD+IVSNPPY+ + + Sbjct: 139 IGIDCVKESISIASKNAKILKLK-NVSFLHSIWFSKVDNMFDMIVSNPPYLSFSEMKNVD 197 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 EV F+P I+L +GL R I ++L VE G+ QK V F Sbjct: 198 KEVL-FEPFIALFSSENGLGAIRHIIKYSKKYLYSKAWLLVEHGWKQKDKVQSFFYKYSF 256 Query: 245 FLVNAFKDYGGNDRVLLFCR 264 +N ++DY +DRV + + Sbjct: 257 ININTYRDYCDSDRVTVGQK 276 >gi|333029740|ref|ZP_08457801.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacteroides coprosuis DSM 18011] gi|332740337|gb|EGJ70819.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacteroides coprosuis DSM 18011] Length = 277 Score = 247 bits (631), Expect = 1e-63, Method: Composition-based stats. Identities = 77/252 (30%), Positives = 112/252 (44%), Gaps = 7/252 (2%) Query: 14 VTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFE 73 + L V + D L +R L +I R HE I + G FY R + Sbjct: 32 ILKLDEMDVYLRKDIKLSRSKRDRLKQSIKRLQNHEPIQYVSGSAYFYGSRFRVKQGVLI 91 Query: 74 PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133 PRPETE LVD L E + +LD+GTG+G + +++ K +P K D+S A Sbjct: 92 PRPETEELVDLILR------ENKGRYALLDIGTGSGCIAISIAKNNPEAKVEAWDVSDDA 145 Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPR 193 L+IA+SN RF + S + FDVIVSNPPYI + + V +++P Sbjct: 146 LKIARSNNKKLETHVRFRKQDILTYHSKKRKFDVIVSNPPYITNKEKKLMDKNVLNWEPE 205 Query: 194 ISLDGGI-DGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKD 252 ++L + L Y I + L + G EI V V ++ E + V KD Sbjct: 206 VALFVEDHNPLLFYNRIGEVGLFLLRRGGRLYFEINQAYGVQVAKLLEQKGYKNVQVLKD 265 Query: 253 YGGNDRVLLFCR 264 G DR++ R Sbjct: 266 LFGKDRIVTAER 277 >gi|257867024|ref|ZP_05646677.1| modification methylase HemK [Enterococcus casseliflavus EC30] gi|257873359|ref|ZP_05653012.1| modification methylase HemK [Enterococcus casseliflavus EC10] gi|257801080|gb|EEV30010.1| modification methylase HemK [Enterococcus casseliflavus EC30] gi|257807523|gb|EEV36345.1| modification methylase HemK [Enterococcus casseliflavus EC10] Length = 285 Score = 247 bits (631), Expect = 1e-63, Method: Composition-based stats. Identities = 77/256 (30%), Positives = 128/256 (50%), Gaps = 8/256 (3%) Query: 8 HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67 + ++ D + + + + L+HE +LG+ +FY RL + Sbjct: 27 QYLFLQRKNWQQLDWLLQMDQPILREDEAQIAADLEQLLQHEPPQYLLGYEEFYGHRLKV 86 Query: 68 SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 + T PRPETE LV++ L ++ +R++D+GTGTGA+ +AL P + V Sbjct: 87 TPATLIPRPETEELVENCLT----KLPADQPLRVVDIGTGTGAIAIALKLARPQWAVSAV 142 Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLE 186 D+S +AL +AK NA G RF Q D V + +D+IVSNPPYI + + + Sbjct: 143 DLSAEALAVAKENAAALGAEIRF--FQGDTLEPVADQQWDLIVSNPPYISAEEWPLMDIS 200 Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLF 245 VR+ +P+++L GL+ Y+ +A L +G ++EIG+ Q + V ++F + Sbjct: 201 VREKEPKMALFAQEQGLAIYKQLAQQAPNCLAPNGQMALEIGFQQGLVVQQLFAAAFPNK 260 Query: 246 LVNAFKDYGGNDRVLL 261 V KD G DR++ Sbjct: 261 EVTVVKDLAGQDRMVF 276 >gi|332519660|ref|ZP_08396124.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Lacinutrix algicola 5H-3-7-4] gi|332044219|gb|EGI80413.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Lacinutrix algicola 5H-3-7-4] Length = 291 Score = 247 bits (631), Expect = 1e-63, Method: Composition-based stats. Identities = 69/252 (27%), Positives = 127/252 (50%), Gaps = 9/252 (3%) Query: 16 GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75 ++ Q+ +D D ++ ++ + NA+ + I I+G +FY + ++ T PR Sbjct: 38 NVTRLQLALDSDLAINKEEQTVIFNALEDLKNEKPIQYIIGETEFYGLPFKVNKHTLIPR 97 Query: 76 PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135 PETE LV L + ++++ + LD+GTG+G + ++L KE + +D+S +A++ Sbjct: 98 PETEELVTLVLKTAKQKLKESKPLTCLDIGTGSGCIAISLAKELKEAQVYAIDVSTEAIK 157 Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEG------LFDVIVSNPPYIESVIVDCLGLEVRD 189 AK NAV N V+ + ++ D ++ F+VIVSNPPY+ ++ + V + Sbjct: 158 KAKENAVLNNVA--VEFIKCDILNACNETLNKDLKFNVIVSNPPYVRNLEKAEIKNNVLN 215 Query: 190 FDPRISLDGGID-GLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN 248 +P ++L D L Y+ IA+ ++ L+K+G EI + + E+ V Sbjct: 216 NEPHLALFVEDDNPLLFYKAIAEFATKKLHKNGKLFFEINEYLGEETKALVENIGFKNVE 275 Query: 249 AFKDYGGNDRVL 260 KD DR+L Sbjct: 276 IIKDIFNKDRML 287 >gi|118602770|ref|YP_903985.1| HemK family modification methylase [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] gi|118567709|gb|ABL02514.1| [protein release factor]-glutamine N5-methyltransferase [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] Length = 261 Score = 247 bits (631), Expect = 1e-63, Method: Composition-based stats. Identities = 80/255 (31%), Positives = 125/255 (49%), Gaps = 14/255 (5%) Query: 10 FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69 L + Q+I D ++ ++ L I + + G + FY++ ++ Sbjct: 18 LLSLALNKNHVQLITHYDYQPNNEEKTQLNQLIKQRQFGIPFAYLSGTKGFYHLDFKVTP 77 Query: 70 DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129 T PRPETELL+D AL +K ++LDLGTG+G + + L ++P + D Sbjct: 78 STLIPRPETELLIDIALGL----FDKNQTCKVLDLGTGSGIIIITLGDKNPQWHLTATDS 133 Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVR 188 S AL+IA+ NA TN + WF + FD+I+SNPPYI+ Sbjct: 134 SINALDIAQQNAKTN-----INFQLGSWFKATPNQIFDLIISNPPYIKQSDPHLND---L 185 Query: 189 DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN 248 F+P+ +L G DGL RTI + +HLNK G +E G++Q+ +++++ S F + Sbjct: 186 SFEPQSALVSGKDGLDDIRTIINNAPQHLNKKGYILLEHGFDQQQEIIQLL-SNNFFNIQ 244 Query: 249 AFKDYGGNDRVLLFC 263 FKDY DR LL Sbjct: 245 KFKDYNQQDRALLAQ 259 >gi|114569198|ref|YP_755878.1| HemK family modification methylase [Maricaulis maris MCS10] gi|114339660|gb|ABI64940.1| [protein release factor]-glutamine N5-methyltransferase [Maricaulis maris MCS10] Length = 319 Score = 247 bits (631), Expect = 1e-63, Method: Composition-based stats. Identities = 97/261 (37%), Positives = 146/261 (55%), Gaps = 8/261 (3%) Query: 6 DSHSFLCRVTG-LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 +S + V + + DP ++ + L R L + ++LG + F+ + Sbjct: 56 ESRFLINHVLAPVRLADALADP-ALFSWQAADELAALAWRRLARVPLSQVLGSQPFWTLD 114 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 L +SSD PR +TE LV++ LA + R++DLGTG+GA+ LALL E P + G Sbjct: 115 LAVSSDVLTPRADTEALVEAVLAEA-----GEASARLVDLGTGSGAILLALLSERPGWSG 169 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCL 183 +GVD+S AL IA +NA G++ R + +Q W + + +G D++VSNPPYI S I+ L Sbjct: 170 LGVDLSAPALAIATANADRCGLANRAEFMQGRWGAGLADGSVDILVSNPPYIVSDILAGL 229 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 EVRD +P ++LDGG+DGL YR I + R L +GL ++EIG++Q V V + Sbjct: 230 EPEVRDHEPALALDGGVDGLDAYREIIADLPRLLVSNGLFALEIGHDQGVTVSALAREAG 289 Query: 244 LFLVNAFKDYGGNDRVLLFCR 264 L + D GNDRV+L R Sbjct: 290 LVDIRVLPDLAGNDRVVLGRR 310 >gi|317401194|gb|EFV81840.1| protein-(glutamine-N5) methyltransferase [Achromobacter xylosoxidans C54] Length = 275 Score = 247 bits (631), Expect = 1e-63, Method: Composition-based stats. Identities = 70/259 (27%), Positives = 115/259 (44%), Gaps = 9/259 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 + L V ++ L R L E + +LG R+F Sbjct: 15 PRLEVRMLLEHVLAKPRAWLLAHDTDPLAPEVAAAYEALAQRRLAGEPMAYLLGQREFMG 74 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 ++ D PRP+TE+LV++AL + + +LDLGTG+GA+ +++ Sbjct: 75 HMFRVTPDVLIPRPDTEVLVETALEC----VAGQAAPAVLDLGTGSGAIAISIALARRDA 130 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIESVIV 180 + + D+S AL +A ++ ++ W+ +V FD+IVSNPPY+ S Sbjct: 131 RVMASDVSAAALAVAAG--NAWELTASVRFVEGSWYDAVPAGEGFDLIVSNPPYVASDDP 188 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 +VR F+PR +L G DGL R I G RHL G +E G++Q V + Sbjct: 189 HLGQGDVR-FEPRGALTDGADGLEDLRRIVAGAHRHLKAGGALWMEHGWDQAEAVRALLA 247 Query: 241 SRKLFLVNAFKDYGGNDRV 259 + V++ +D G +R+ Sbjct: 248 ATGFSDVHSRRDLAGIERI 266 >gi|325914285|ref|ZP_08176635.1| (protein release factor)-glutamine N5-methyltransferase [Xanthomonas vesicatoria ATCC 35937] gi|325539540|gb|EGD11186.1| (protein release factor)-glutamine N5-methyltransferase [Xanthomonas vesicatoria ATCC 35937] Length = 284 Score = 246 bits (630), Expect = 2e-63, Method: Composition-based stats. Identities = 74/259 (28%), Positives = 114/259 (44%), Gaps = 7/259 (2%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L G + + + R E + + G R F+ + L Sbjct: 25 DAEPLLLHALGRDRAWLFAHGRDPVPPALAQAFDTLVQRRQAGEPVAYLTGSRGFWTLDL 84 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 +S+ T PR +TE LV+ AL R++ R+ DLG G+GA+ LA+ E P + + Sbjct: 85 AVSTATLIPRADTEALVELALE----RLDHAPGRRVADLGAGSGAIALAIASERPQAQVI 140 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLG 184 D S AL IA+ NA ++G+S WF+ + G FD+I SNPPYI + Sbjct: 141 ATDASAAALAIAQRNADSHGLS-NVHCRHGSWFAPLAGERFDLIASNPPYIAAGDPHLAQ 199 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 ++R ++P +L G DGL R+I HL G +E G++Q V + Sbjct: 200 GDLR-YEPASALASGSDGLDDIRSIVADAPAHLRAGGWLLLEHGWDQGAAVAELLRRCGF 258 Query: 245 FLVNAFKDYGGNDRVLLFC 263 V +D +RV L Sbjct: 259 AQVATHQDLEQRERVTLGR 277 >gi|317132919|ref|YP_004092233.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Ethanoligenens harbinense YUAN-3] gi|315470898|gb|ADU27502.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Ethanoligenens harbinense YUAN-3] Length = 287 Score = 246 bits (630), Expect = 2e-63, Method: Composition-based stats. Identities = 76/263 (28%), Positives = 126/263 (47%), Gaps = 7/263 (2%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L + L ++ + D+ + + L + R E + +LG +F + Sbjct: 23 DAACLLEKHVRLRREELPLRGDTPVAEDVCTALWADVERRAAGEPLQYLLGEWEFMGLPF 82 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 + PRPETELLV++A+A+ + R+L+L G+G V ++ + + + V Sbjct: 83 KVGPGVLIPRPETELLVEAAIAYLNVQPPDAAAPRLLELCAGSGCVAISAARAT-GCEAV 141 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS----VEGLFDVIVSNPPYIESVIVD 181 ++ S AL ++N +G+ +R ++ D + G FDV++ NPPYI + + Sbjct: 142 CLEYSADALGYLRANIALHGLEDRVRAVEGDMLLPPRGVLSGSFDVLLCNPPYIRTEELP 201 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 L EVR +P ++LDGG DGL YR + V L GL + E+G Q DV R+ E Sbjct: 202 ALQAEVRR-EPVLALDGGPDGLRFYRALCAWVP-VLRPGGLLACEVGMGQAEDVARLLED 259 Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264 L V DY G R++ R Sbjct: 260 AGLCNVAVRNDYAGIGRMVRGYR 282 >gi|212697118|ref|ZP_03305246.1| hypothetical protein ANHYDRO_01684 [Anaerococcus hydrogenalis DSM 7454] gi|212675893|gb|EEB35500.1| hypothetical protein ANHYDRO_01684 [Anaerococcus hydrogenalis DSM 7454] Length = 263 Score = 246 bits (630), Expect = 2e-63, Method: Composition-based stats. Identities = 80/253 (31%), Positives = 130/253 (51%), Gaps = 8/253 (3%) Query: 11 LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70 L + + + + + + L+ L + K + +G +FY + L + Sbjct: 18 LTYLLNTNKNLLYLKKEEKLEKDIEERLLKIQDKISKGYPLQYAIGKWNFYGLDLLVDKR 77 Query: 71 TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130 PR ETE+LVD + +K +ILD+G+G+GA+ LAL K +GVDIS Sbjct: 78 ALIPRYETEILVDLIIN------DKVKKDKILDIGSGSGAISLALSYNLKNSKVLGVDIS 131 Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDF 190 A+ ++ N N + + +SD FS+VEG FD+IVSNPPYI + L + + Sbjct: 132 KDAINLSNEN-KKNLSIKNVEFKESDIFSNVEGKFDIIVSNPPYINKEDFENLDKK-LSY 189 Query: 191 DPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAF 250 +P+ +L GG DGL YR I + LNK+G +EIGY+QK ++++ + + A+ Sbjct: 190 EPQNALLGGDDGLFFYRKIILNAKKFLNKNGKIYLEIGYDQKNPIIKLLKEEGYKDIRAY 249 Query: 251 KDYGGNDRVLLFC 263 KD+ DR++ C Sbjct: 250 KDFNDFDRIIKAC 262 >gi|331002271|ref|ZP_08325790.1| protein-(glutamine-N5) methyltransferase [Lachnospiraceae oral taxon 107 str. F0167] gi|330411365|gb|EGG90781.1| protein-(glutamine-N5) methyltransferase [Lachnospiraceae oral taxon 107 str. F0167] Length = 275 Score = 246 bits (630), Expect = 2e-63, Method: Composition-based stats. Identities = 89/263 (33%), Positives = 136/263 (51%), Gaps = 14/263 (5%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDD-RQRFFLTNAIVRSLKHESIHRILGWRDF 60 A D + + L + + + D + L + + L + + I+ F Sbjct: 21 DAASDILLLIYEIFDLDFSKWTMYKYETIKDISKLETLKEYVEKRLTNMPVQYIVNKAYF 80 Query: 61 YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120 + L + + PR +TE+LV+ L +ILD+ TG+GA+ +AL K Sbjct: 81 CGLPLYVDENVLIPRFDTEVLVEEVLNL------GDKNKKILDVCTGSGAIAIALKKLGK 134 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESV 178 F + +DIS +AL+IAK NA F L+SD FSS+ E +D+IVSNPPYI+S Sbjct: 135 FERVDALDISEEALKIAKKNAKALECDINF--LKSDMFSSLTSENKYDIIVSNPPYIQSH 192 Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238 IVD L +V+DF+PR++LDG IDG+ Y+ I L+ G+ +EIGY++ D+ + Sbjct: 193 IVDSLERQVKDFEPRLALDGDIDGMKFYKIIEKNFMNFLSPGGILGLEIGYDEASDIKNL 252 Query: 239 FESRKLFLVNAFKDYGGNDRVLL 261 FE +K V KD G DRV + Sbjct: 253 FEDKK---VIIKKDLAGLDRVAI 272 >gi|42521716|ref|NP_967096.1| HemK protein [Bdellovibrio bacteriovorus HD100] gi|39574246|emb|CAE77750.1| HemK protein [Bdellovibrio bacteriovorus HD100] Length = 293 Score = 246 bits (630), Expect = 2e-63, Method: Composition-based stats. Identities = 82/270 (30%), Positives = 136/270 (50%), Gaps = 16/270 (5%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 D+ L L Q+ + D + D + L + R E + I+G+RDF+N Sbjct: 22 PRLDAELLLAHGLKLERIQLYLRFDQPMKDEELAVLRELVRRRASGEPVAYIMGYRDFFN 81 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 R +++ PRPETE +V+ LA++ +K + ++DLG G+G + L+LLKE P Sbjct: 82 HRFEVNNQVLIPRPETEHIVEDVLAWA---SDKEASLGLIDLGCGSGCIGLSLLKEYPNA 138 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD---------WFSSVEGL--FDVIVSN 171 K + VD+ A+E+A+ NA + V++R L D + G DV+VSN Sbjct: 139 KLIAVDLLPGAIEVAQRNAQSLDVADRVQFLNLDAGNVEAIMSAYKDFTGQSSIDVLVSN 198 Query: 172 PPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231 PPYI S + V+ F+P +L GL+ + + + +L GL +E+G +Q Sbjct: 199 PPYIASDD-PQVEENVKKFEPNSALYAEDSGLALLKGWSKAFAPYLKTPGLMLMEMGMSQ 257 Query: 232 KVDVVRIFESRKLFL-VNAFKDYGGNDRVL 260 + + +ES K+F ++ KD G+DRV+ Sbjct: 258 GPAMKQAYESLKIFNEISVIKDLSGHDRVI 287 >gi|150010265|ref|YP_001305008.1| putative protoporphyrinogen oxidase [Parabacteroides distasonis ATCC 8503] gi|255012466|ref|ZP_05284592.1| putative protoporphyrinogen oxidase [Bacteroides sp. 2_1_7] gi|149938689|gb|ABR45386.1| putative protoporphyrinogen oxidase [Parabacteroides distasonis ATCC 8503] Length = 318 Score = 246 bits (630), Expect = 2e-63, Method: Composition-based stats. Identities = 82/300 (27%), Positives = 126/300 (42%), Gaps = 46/300 (15%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 +A + RV GLS+HQ+++ L D ++F + + ++ I +LG DFY Sbjct: 20 EAQALVRLIMERVCGLSTHQLLLGKGKELSDTEKFKIKEIVEGLRLYKPIQYLLGIADFY 79 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 + ++ D PRPET LV+ + + RILD+GTG+G + ++L K P Sbjct: 80 GMEFKVTPDVLIPRPETAELVERIITDY-----QGQAPRILDIGTGSGCIAISLAKHLPE 134 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSE---------------------------RFDTLQ 154 + VDIS +AL +A+ NA N VS RF + Sbjct: 135 AEVAAVDISPEALAVAEENARMNQVSVSFHELDILSEGYSSFMQEKQNFHVRETRFSCTR 194 Query: 155 SDWF-------------SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD-GGI 200 + F +S+ G + IVSNPPYI + V + +P ++L Sbjct: 195 NKIFTYVKLKSHTEETEASLIGSLNCIVSNPPYIMYREKATMEANVLENEPHLALFVPDD 254 Query: 201 DGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 D L YR IA RHL + G EI + V + V +D G DR++ Sbjct: 255 DPLLFYRAIARFGQRHLAEGGHLYFEINALCGKETVAMLRQENYTEVELIQDLYGKDRIV 314 >gi|330815384|ref|YP_004359089.1| HemK protein [Burkholderia gladioli BSR3] gi|327367777|gb|AEA59133.1| HemK protein [Burkholderia gladioli BSR3] Length = 282 Score = 246 bits (629), Expect = 2e-63, Method: Composition-based stats. Identities = 84/261 (32%), Positives = 120/261 (45%), Gaps = 11/261 (4%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L G S Q+I D+ L R L E + +++G R+F+ + Sbjct: 21 DARILLAHALGWSRTQLITRADAPLAAADAERYLALAARRLAGEPVAQLVGSREFFGLEF 80 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 ++ D PRP+TELLV+SALA IE +LDLGTG+GAV +A+ P + Sbjct: 81 AVTPDVLIPRPDTELLVESALA----AIEGIAAPAVLDLGTGSGAVAVAIASMRPDARVQ 136 Query: 126 GVDISCKALEIAKSNAVTNGVSER----FDTLQSDWFSSVE--GLFDVIVSNPPYIESVI 179 +D S AL +A+ NA R L+SDW+ +++ F IVSNPPYI Sbjct: 137 ALDRSAAALAVARGNAARLLDPARPGGALRFLESDWYGALDPLQRFHAIVSNPPYIACRD 196 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 ++R F+PR +L DGL R IA G L G +E GY+Q V I Sbjct: 197 PHLEQGDLR-FEPRGALTDEADGLEAIRAIAAGAPAFLLPRGALWIEHGYDQAEAVRAIL 255 Query: 240 ESRKLFLVNAFKDYGGNDRVL 260 + V + D +R Sbjct: 256 AAAGFEAVASLTDLAAIERCT 276 >gi|160946321|ref|ZP_02093530.1| hypothetical protein PEPMIC_00281 [Parvimonas micra ATCC 33270] gi|158447437|gb|EDP24432.1| hypothetical protein PEPMIC_00281 [Parvimonas micra ATCC 33270] Length = 266 Score = 246 bits (629), Expect = 2e-63, Method: Composition-based stats. Identities = 82/258 (31%), Positives = 127/258 (49%), Gaps = 10/258 (3%) Query: 8 HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67 L +TG S ++ +D +D I + ++ + I G +FY + L + Sbjct: 17 WLILEYLTGKKSVELKMDLRFCVDS-IYNDFLEIIEKRKQNYPLQYIFGKWEFYGLELFV 75 Query: 68 SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 PR ETE+LVD + + + +ILD+G G+GA+ LAL K GV Sbjct: 76 DESALIPRFETEILVDEIVKLNCKKD------KILDIGCGSGAISLALAKNLYKSYIYGV 129 Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLE 186 DIS +A+ ++ N + +SD FS V+ FD+IVSNPPYI+ + L E Sbjct: 130 DISKEAINLSNKNKEKLNLQ-NIKFFESDIFSKVDEKHFDIIVSNPPYIDDAEMKTLEKE 188 Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246 F+P+ +L GG DGL YR I +L++ G+ + EIGYNQ + + + Sbjct: 189 -LSFEPQNALYGGQDGLFFYREIIINSLDYLSEKGVLAFEIGYNQMEIISNLLIENGFEI 247 Query: 247 VNAFKDYGGNDRVLLFCR 264 + A KD+ G DR+L+ R Sbjct: 248 LIAKKDFAGFDRILIAKR 265 >gi|227499755|ref|ZP_03929855.1| polypeptide chain release factor methyltransferase HemK [Anaerococcus tetradius ATCC 35098] gi|227218141|gb|EEI83407.1| polypeptide chain release factor methyltransferase HemK [Anaerococcus tetradius ATCC 35098] Length = 272 Score = 246 bits (629), Expect = 2e-63, Method: Composition-based stats. Identities = 70/254 (27%), Positives = 119/254 (46%), Gaps = 8/254 (3%) Query: 11 LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70 L + + +I+ L++ R L I + K + +G +F+ + + Sbjct: 26 LTYLLNTNKSSIILRSGEELNNEIRVKLEEIIDKCEKGYPLQYAIGQWEFFGLNFKVDER 85 Query: 71 TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130 PR ETE++VD + + +ILD+GTG+GA+ L+L K + DI Sbjct: 86 ALIPRFETEIIVDYLIKAPFKKD------KILDIGTGSGAIALSLAKNLKASDILASDIE 139 Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDF 190 +AL +A+ N +S ++SD F + G FD+I+SNPPYI S + L + + Sbjct: 140 DRALSLAEENKKRLKIS-NVSFIKSDLFEEISGKFDIIISNPPYINSKDFEKLDKTLY-Y 197 Query: 191 DPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAF 250 +P+ +L +GL Y+ I S +LN+ EIGY+QK D+ + + Sbjct: 198 EPKSALLAEENGLYFYKRIIKDASSYLNEGARLVFEIGYDQKSDISSLLNESDFKNIICI 257 Query: 251 KDYGGNDRVLLFCR 264 KDY DR ++ + Sbjct: 258 KDYNDFDRFIIAEK 271 >gi|21241678|ref|NP_641260.1| protoporphyrinogen oxidase [Xanthomonas axonopodis pv. citri str. 306] gi|21107043|gb|AAM35796.1| protoporphyrinogen oxidase [Xanthomonas axonopodis pv. citri str. 306] Length = 286 Score = 246 bits (629), Expect = 2e-63, Method: Composition-based stats. Identities = 74/259 (28%), Positives = 116/259 (44%), Gaps = 7/259 (2%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ + L G + + + + R E + + G R F+ + L Sbjct: 25 DAEALLLHALGRDRGWLFMHGRDAVPLSIAQAFDALVQRREAGEPVAYLTGSRGFWTLDL 84 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 +S T PR +TE LV+ AL R++ R+ DLGTG+GA+ LA+ E P + + Sbjct: 85 AVSPATLIPRADTEALVELALE----RLDTLPGRRVADLGTGSGAIALAIASERPQAQVI 140 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLG 184 D S AL +A+ NA ++ + + WF+ + G FD+I SNPPYI + Sbjct: 141 ATDASAAALAMAQRNADSHSLR-NVECRLGGWFAPLAGETFDLIASNPPYIAAHDSHLQQ 199 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 ++R ++P +L G DGL R I HL G +E G++Q V + +R Sbjct: 200 GDLR-YEPASALASGSDGLDDIRLIVADAPAHLLPGGWLLLEHGWDQGAAVAELLVARGF 258 Query: 245 FLVNAFKDYGGNDRVLLFC 263 V +D DRV L Sbjct: 259 AAVATHQDLEQRDRVTLGR 277 >gi|304415272|ref|ZP_07395968.1| N5-glutamine methyltransferase [Candidatus Regiella insecticola LSR1] gi|304282878|gb|EFL91345.1| N5-glutamine methyltransferase [Candidatus Regiella insecticola LSR1] Length = 273 Score = 246 bits (629), Expect = 2e-63, Method: Composition-based stats. Identities = 80/247 (32%), Positives = 121/247 (48%), Gaps = 22/247 (8%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 RD+ L VTG + ++ ++ L Q F L + R + E I ++G R+F++ Sbjct: 21 PKRDAEILLSFVTGRARTFLLAFSETELTGEQLFKLAPLVERRQQGEPIAYLVGEREFWS 80 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + LT+SS + PRP+TE LV+ AL D RILDLG+G+GA+ LAL E P Sbjct: 81 LPLTVSSASLIPRPDTESLVEQALVCL-----PADACRILDLGSGSGAIALALASERPDC 135 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW---------------FSSVEGLFDV 167 +G+DI+ A+ +A+ NA+ + +Q +W FSS+ F + Sbjct: 136 LVIGIDINADAVTLARHNALKLAI-NNLRFVQGNWFNINAFTKQGVERDHFSSLMAGFRL 194 Query: 168 IVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227 IVSNPPYI S +VR ++P +L G DG+ I +L +G VE Sbjct: 195 IVSNPPYIASDDPHLKMGDVR-YEPVEALVAGDDGMDDLVIIVRQAPAYLLSEGWLLVEH 253 Query: 228 GYNQKVD 234 G+ Q Sbjct: 254 GWQQAKK 260 >gi|188587461|ref|YP_001919006.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Natranaerobius thermophilus JW/NM-WN-LF] gi|179352148|gb|ACB86418.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Natranaerobius thermophilus JW/NM-WN-LF] Length = 321 Score = 246 bits (629), Expect = 2e-63, Method: Composition-based stats. Identities = 74/281 (26%), Positives = 136/281 (48%), Gaps = 22/281 (7%) Query: 4 LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63 ++++ L + +++ P+ L Q L +++ + + G R+F + Sbjct: 37 IKEADFLLAFILDWDRSKLLAYPEKHLSSGQYKELKELVIKRSEGTPYAYLTGKREFMGL 96 Query: 64 RLTLSSDTFEPRPETELLVDSALAFS--------------LPRIEKRDVVRILDLGTGTG 109 T++ + PRP+TE++V+ AL L E ++ILD+ TG+G Sbjct: 97 EFTVTENVLIPRPDTEVVVEFALNCLGKIILKDNPNNKKELQFNELNSPIKILDICTGSG 156 Query: 110 AVCLALLKES-----PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EG 163 + L++ + DIS KALEIA NA G+ + ++SD FS+ + Sbjct: 157 NIGLSIAYYFNKMYGQNLELTLSDISDKALEIAHINASNLGLLSQCKFVKSDLFSNTSDD 216 Query: 164 LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223 + +I +NPPYI S L EV+ +P +L G DGL +Y+ I+ + ++L++DG+ Sbjct: 217 NYRLITANPPYISSKHYSTLSKEVKL-EPAHALLAGEDGLYYYKKISQQIKKYLSQDGVL 275 Query: 224 SVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 EIG +Q+ +V + ++ L V + +D G R++ R Sbjct: 276 IFEIGEDQQEEVENMLSTQNLV-VTSEQDLAGRPRLIAASR 315 >gi|330996374|ref|ZP_08320257.1| protein-(glutamine-N5) methyltransferase [Paraprevotella xylaniphila YIT 11841] gi|329573232|gb|EGG54846.1| protein-(glutamine-N5) methyltransferase [Paraprevotella xylaniphila YIT 11841] Length = 284 Score = 246 bits (629), Expect = 2e-63, Method: Composition-based stats. Identities = 75/263 (28%), Positives = 121/263 (46%), Gaps = 6/263 (2%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 +A + L GL+ + + + +R L N + R + E + +LG DF Sbjct: 20 EARAIARLVLETRFGLTQVDICMGRERTFSLEERRDLENIVKRLSQKEPVQYVLGQADFC 79 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 +++ PRPETE L + + + + ILD+GTG+G + + L +E P Sbjct: 80 GRTFSVAPGVLVPRPETEELAEWIIRD--EKASEFSSPHILDIGTGSGCIAITLSQELPQ 137 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESV 178 + +DIS +AL IA+ NA GV+ F D L S L+D+IVSNPPYI Sbjct: 138 AQVSAIDISPQALAIARENAECLGVAVNFRCQDILDSPSKEQDSPLWDIIVSNPPYICEH 197 Query: 179 IVDCLGLEVRDFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237 + + V ++P +L D L YR I + + L + G +EI + R Sbjct: 198 EREDMEENVLRYEPSQALFVPDHDPLLFYRAIGEYAVKMLKEGGRLYMEINRAYGRETAR 257 Query: 238 IFESRKLFLVNAFKDYGGNDRVL 260 +F+ L + KD GN+R++ Sbjct: 258 LFQHLGLRDIIVRKDLYGNERMV 280 >gi|289432896|ref|YP_003462769.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Dehalococcoides sp. GT] gi|288946616|gb|ADC74313.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Dehalococcoides sp. GT] Length = 277 Score = 246 bits (629), Expect = 3e-63, Method: Composition-based stats. Identities = 70/263 (26%), Positives = 116/263 (44%), Gaps = 10/263 (3%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 +A +S L G+S Q+ ++ + L + + L+ E I G ++FY Sbjct: 21 EARLESEILLRHTLGISRVQLHLELERELKPEKETAYFETLQHRLEGEPSAYITGEKEFY 80 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 + PRPETE L++ AL + + I D+GTG+G + + L E Sbjct: 81 GRTFLVDKRVLIPRPETEHLIEKALQIAR----HYECPYIADIGTGSGVIAITLALELKD 136 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181 DIS ALE+A+ NA + +R Q D SS+ + D++ +N PY+ Sbjct: 137 AYVYAADISEDALEVARQNAEEYRLEKRLSFYQGDLLSSLPEMVDILAANLPYVPKAE-- 194 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 E+ + +PR++LDGG DGL YR + + L G +EIG +Q + + + Sbjct: 195 ---AELLNGEPRLALDGGKDGLDLYRRLIPFLPARLRPGGTALLEIGIHQSELLAKYIKD 251 Query: 242 -RKLFLVNAFKDYGGNDRVLLFC 263 + DY G R++ Sbjct: 252 TLPQASLEIISDYAGIPRIVALT 274 >gi|116329264|ref|YP_798984.1| methylase of polypeptide chain release factors [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116122008|gb|ABJ80051.1| Methylase of polypeptide chain release factors [Leptospira borgpetersenii serovar Hardjo-bovis L550] Length = 286 Score = 246 bits (628), Expect = 3e-63, Method: Composition-based stats. Identities = 72/265 (27%), Positives = 114/265 (43%), Gaps = 7/265 (2%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A D+ L + L ++ V+ + +L + ++ IV K++ I G + FYN Sbjct: 26 ARLDAEILLADLLNLQRVKLYVNFERLLTETEKNAYRERIVDRSKNKPTAYITGQKAFYN 85 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 ++ PRPETE LV+ L L +LDL TG+G + ++L + Sbjct: 86 SVFFVNEKVLIPRPETEELVEKIL---LDFKGNNSEQNVLDLCTGSGCIGISLKSARKDW 142 Query: 123 KGVGVDISCKALEIAKSNA-VTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVI 179 DIS ALEIAK NA G L+S+ F S+ E FD+IV+NPPYI Sbjct: 143 NITLSDISKDALEIAKKNAIQIIGEGNNIQFLESNLFLSIPKESEFDLIVTNPPYIPISD 202 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 + +V D++P ++L D + + HL + G +E + V Sbjct: 203 KTEMMKDVVDYEPHLALF-LEDPKEFLSKLIEDARIHLKEGGKFYMETYPSLAWTFVSES 261 Query: 240 ESRKLFLVNAFKDYGGNDRVLLFCR 264 + KD G DR ++ + Sbjct: 262 TTNGWKEGKVEKDLSGKDRFVVLTK 286 >gi|311898377|dbj|BAJ30785.1| putative protein methyltransferase HemK [Kitasatospora setae KM-6054] Length = 288 Score = 246 bits (628), Expect = 3e-63, Method: Composition-based stats. Identities = 75/266 (28%), Positives = 108/266 (40%), Gaps = 13/266 (4%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ V G+ Q+ PD D R A+ R + E + I G F + L Sbjct: 26 DAEELAAHVHGVKRSQLHTVPDGDFDAR----YWEAVSRREQREPLQHITGRAFFRYLEL 81 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 + F PRPETE +V+ A+ + ++DL TG+GA+ LAL +E P Sbjct: 82 EVGPGVFVPRPETESVVEWAIDAVRAMDVAEPL--VVDLCTGSGAIALALAQELPRSTVH 139 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS------VEGLFDVIVSNPPYIESVI 179 ++ AL + N + R Q D + +G FD+++SNPPYI Sbjct: 140 AFELDEGALAYTRRNVEASPDRARVHLHQGDATQAFADDRGWDGRFDLVISNPPYIPLTE 199 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 + + E RD DP++SL G DGL R I +R L G +E Q V IF Sbjct: 200 WEYVAPEARDHDPQMSLFSGEDGLDTIRGIERVAARLLRPGGAVVIEHADTQGGQVPWIF 259 Query: 240 -ESRKLFLVNAFKDYGGNDRVLLFCR 264 E +D R R Sbjct: 260 REEGGWTDAADHRDLNNRPRFTTARR 285 >gi|16080753|ref|NP_391581.1| glutamine methylase [Bacillus subtilis subsp. subtilis str. 168] gi|221311661|ref|ZP_03593508.1| hypothetical protein Bsubs1_20001 [Bacillus subtilis subsp. subtilis str. 168] gi|221315989|ref|ZP_03597794.1| hypothetical protein BsubsN3_19922 [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221320900|ref|ZP_03602194.1| hypothetical protein BsubsJ_19865 [Bacillus subtilis subsp. subtilis str. JH642] gi|221325184|ref|ZP_03606478.1| hypothetical protein BsubsS_20026 [Bacillus subtilis subsp. subtilis str. SMY] gi|321313250|ref|YP_004205537.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Bacillus subtilis BSn5] gi|1170229|sp|P45873|HEMK_BACSU RecName: Full=Protein methyltransferase hemK homolog gi|853777|emb|CAA89885.1| ywkE [Bacillus subtilis subsp. subtilis str. 168] gi|2636225|emb|CAB15717.1| glutamine methylase of release factor 1 (and perhaps others) at a GGQ site [Bacillus subtilis subsp. subtilis str. 168] gi|291486284|dbj|BAI87359.1| hypothetical protein BSNT_05651 [Bacillus subtilis subsp. natto BEST195] gi|320019524|gb|ADV94510.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Bacillus subtilis BSn5] Length = 288 Score = 246 bits (628), Expect = 3e-63, Method: Composition-based stats. Identities = 73/266 (27%), Positives = 117/266 (43%), Gaps = 9/266 (3%) Query: 2 QALRD---SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWR 58 +A R+ + L TG+ +++ + + + + + + + I+G Sbjct: 17 EAGREENAAELLLLYDTGMERSKLLASLQEPIGEDELYRFKRHVEMHKEGVPVQYIIGKE 76 Query: 59 DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118 FY ++ D PRPETE +V L + + ++D+GTG+GA+ + L E Sbjct: 77 FFYGREFMVNDDVLIPRPETEEVVFHLLEKYRSVFSEDGKLEVVDVGTGSGAIAVTLALE 136 Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYI 175 + F VDIS +AL++A +NA G + RF Q D D+IVSNPPYI Sbjct: 137 NQSFSVSAVDISKEALQVASANAEKLGANVRF--YQGDLLEPFIKAGKKADIIVSNPPYI 194 Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235 + L VR +P +L G DGL Y+ + + + EIG+ Q V Sbjct: 195 SEEEMADLSEIVRFHEPLHALTDGGDGLKFYKRFMEDIPLVMKDKVFVVFEIGWKQGAAV 254 Query: 236 VR-IFESRKLFLVNAFKDYGGNDRVL 260 I ++ K V KD G DR + Sbjct: 255 KDLILKAFKGAEVEVLKDINGKDRTI 280 >gi|240137463|ref|YP_002961934.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Methylobacterium extorquens AM1] gi|240007431|gb|ACS38657.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Methylobacterium extorquens AM1] Length = 302 Score = 246 bits (628), Expect = 3e-63, Method: Composition-based stats. Identities = 99/265 (37%), Positives = 141/265 (53%), Gaps = 6/265 (2%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 A D+ L L+ + + L L A R L E + RILG +F+ Sbjct: 35 NARSDARFLLQHTLSLTPLDLSLRGREPLGAAGAEALRQAAERRLAGEPVARILGAWEFW 94 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 + L +T PRP+TE +V++AL E+ +R++DLGTGTG + +ALL E P Sbjct: 95 GLPFALGPETLVPRPDTESVVETALRLL---PERERPLRLIDLGTGTGCILVALLHERPG 151 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181 G+G+D S AL IA+ NA NGV++R L W ++EG FD+IVSNPPYI + ++ Sbjct: 152 AVGIGLDRSAAALAIARRNAAANGVADRAAFLCGSWLDALEGPFDLIVSNPPYIAAPVIA 211 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR---HLNKDGLCSVEIGYNQKVDVVRI 238 L EVR DP+ +LDGG DGL YR I V+R L+ G +EIGY+Q + R+ Sbjct: 212 TLEPEVRLHDPQAALDGGADGLDAYRAILADVARRPGLLSAQGALVLEIGYDQANALTRL 271 Query: 239 FESRKLFLVNAFKDYGGNDRVLLFC 263 + + +D GNDRV+ Sbjct: 272 AQEAGFEDIGFGRDLAGNDRVVTLR 296 >gi|73748900|ref|YP_308139.1| SAM-dependent methyltransferase HemK family protein [Dehalococcoides sp. CBDB1] gi|73660616|emb|CAI83223.1| SAM-dependent methyltransferase HemK family [Dehalococcoides sp. CBDB1] Length = 277 Score = 246 bits (628), Expect = 3e-63, Method: Composition-based stats. Identities = 70/263 (26%), Positives = 114/263 (43%), Gaps = 10/263 (3%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 +A +S L G+S Q+ ++ + L + + L+ E I G ++FY Sbjct: 21 EARLESEILLRHTLGISRVQLHLELERELKPEKETVYFETLQHRLEGEPSAYITGEKEFY 80 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 + PRPETE L++ AL + + I D+GTG+G + + L E Sbjct: 81 GRTFLVDKRVLIPRPETEHLIEKALQIAR----HYECPYIADIGTGSGVIAITLALELKD 136 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181 DIS ALE+A+ NA + +R Q D SS+ + D++ +N PY+ Sbjct: 137 AYVYATDISEDALEVARQNAEEYRLEKRLSFYQGDLLSSLPEMVDILAANLPYVPKAEAG 196 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 L +PR++LDGG DGL YR + + L G +EIG +Q + + + Sbjct: 197 LLNG-----EPRLALDGGKDGLDLYRRLIPILPARLRPGGTALLEIGIHQSELLAKYIKD 251 Query: 242 -RKLFLVNAFKDYGGNDRVLLFC 263 + DY G R++ Sbjct: 252 TLPQASLEIISDYAGIPRIVALT 274 >gi|293371695|ref|ZP_06618106.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacteroides ovatus SD CMC 3f] gi|292633392|gb|EFF51962.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacteroides ovatus SD CMC 3f] Length = 278 Score = 246 bits (628), Expect = 3e-63, Method: Composition-based stats. Identities = 81/260 (31%), Positives = 117/260 (45%), Gaps = 12/260 (4%) Query: 9 SFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLS 68 C + GL + + + D +L + ++ L N I R K+E I I G +F ++ Sbjct: 27 LICCDMLGLDALDIYMGKDIILSECKQRELENIIFRLQKNEPIQYIRGVAEFCGRNFKVA 86 Query: 69 SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128 S PRPET LV+ + E + R+LD+GTG+G + ++L K+ P + D Sbjct: 87 SGVLIPRPETAELVELIVE------ESPNARRLLDIGTGSGCIAISLDKKLPDAEVEAWD 140 Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL---FDVIVSNPPYIESVIVDCLGL 185 IS +AL IA+ N RF LQ D S FDVIVSNPPY+ + + Sbjct: 141 ISEEALAIARKNNDALEAGVRF--LQRDVLSDDWEKVPSFDVIVSNPPYVTETEKNEMDA 198 Query: 186 EVRDFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 V D++P ++L D L Y IA S L G EI + I E + Sbjct: 199 NVLDWEPGLALFVPDEDPLRFYNRIACLGSDLLLPGGKLYFEINQAYGRETAHILEMNQY 258 Query: 245 FLVNAFKDYGGNDRVLLFCR 264 V KD G DR++ R Sbjct: 259 RDVRVIKDIFGKDRIVTANR 278 >gi|116330130|ref|YP_799848.1| methylase of polypeptide chain release factors [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|116123819|gb|ABJ75090.1| Methylase of polypeptide chain release factors [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 286 Score = 246 bits (628), Expect = 3e-63, Method: Composition-based stats. Identities = 72/265 (27%), Positives = 114/265 (43%), Gaps = 7/265 (2%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A D+ L + L ++ V+ + +L + ++ IV K++ I G + FYN Sbjct: 26 ARLDAEILLADLLNLQRVKLYVNFERLLTETEKNAYRERIVDRSKNKPTAYITGQKAFYN 85 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 ++ PRPETE LV+ L L +LDL TG+G + ++L + Sbjct: 86 SVFFVNEKVLIPRPETEELVEKIL---LDFKGNNSEQNVLDLCTGSGCIGISLKSARKDW 142 Query: 123 KGVGVDISCKALEIAKSNA-VTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVI 179 DIS ALEIAK NA G L+S+ F S+ E FD+IV+NPPYI Sbjct: 143 NITLSDISKDALEIAKKNAIQIIGEGNNIQFLESNLFLSIPKESEFDLIVTNPPYIPISD 202 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 + +V D++P ++L D + + HL + G +E + V Sbjct: 203 KTAMMKDVVDYEPHLALF-LEDPKEFLSKLIEDARIHLKEGGKFYMETYPSLAWTFVSES 261 Query: 240 ESRKLFLVNAFKDYGGNDRVLLFCR 264 + KD G DR ++ + Sbjct: 262 TTNGWKEGKVEKDLSGKDRFVVLTK 286 >gi|304438486|ref|ZP_07398426.1| protein-(glutamine-N5) methyltransferase [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304368569|gb|EFM22254.1| protein-(glutamine-N5) methyltransferase [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 292 Score = 245 bits (627), Expect = 3e-63, Method: Composition-based stats. Identities = 82/263 (31%), Positives = 133/263 (50%), Gaps = 3/263 (1%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 + D+ L V G + V D L+ + + + H I ILG R+F Sbjct: 27 SRLDAEVLLAAVLGRDRMYLYVHFDEPLEPAELATFRSYVKERGAHVPIAYILGRREFMG 86 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALLKESPF 121 + ++ DT PRP+TE+L A+ R E +R D+GTGTGA+ L++L + Sbjct: 87 LAFRVTRDTLIPRPDTEILAQFAVDTLRARAEAGAGELRFADIGTGTGAIALSVLHHTEG 146 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIV 180 + VDIS A +A NA T G++ER + L D + + G + +I+SNPPYI S V Sbjct: 147 TRADAVDISPAAAAVAAENAATLGLTERIEVLTGDLTAPLFGRSYAMILSNPPYIPSADV 206 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 L +V+ ++P ++LDGG DGL+ YR + L + G+ +VE+G ++ DV + Sbjct: 207 KTLMEDVQAYEPHLALDGGADGLAVYRCLLRDAPDLLTEGGVLAVEVGVHEATDVAALMA 266 Query: 241 SRK-LFLVNAFKDYGGNDRVLLF 262 + + +D G +RV++ Sbjct: 267 AHPRIVRTKTLRDLAGIERVVVG 289 >gi|254447043|ref|ZP_05060510.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [gamma proteobacterium HTCC5015] gi|198263182|gb|EDY87460.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [gamma proteobacterium HTCC5015] Length = 285 Score = 245 bits (627), Expect = 3e-63, Method: Composition-based stats. Identities = 74/249 (29%), Positives = 116/249 (46%), Gaps = 7/249 (2%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSL-KHESIHRILGWRDF 60 A ++ + G S + I D D VL + Q+ + + R + + + G F Sbjct: 27 NAWDEAVWLVLHALGRSPAEPIEDADIVLSEDQQQAAFDWLQRRIDTRKPTAYLTGQAWF 86 Query: 61 YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120 + ++ DT PR L+ + LPR R+LDL TG G + +A P Sbjct: 87 CGLPFEVTEDTLIPRSPIAELIQQQFSPWLPR----PPQRVLDLCTGGGCIAIACAYAFP 142 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180 + VG DIS AL +A+ N + + R L SD FS+VEG FD+IVSNPPY+++ + Sbjct: 143 DAQVVGTDISEAALAVARRNVAAHQLQGRVQCLSSDVFSNVEGCFDLIVSNPPYVDAEDM 202 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 L E R +P ++L DGL R I V +L+ DG+ +E+G N + +V + Sbjct: 203 AALPAEYR-HEPELALASERDGLGITRRILADVGNYLSDDGVLVLEVG-NSETALVEAYP 260 Query: 241 SRKLFLVNA 249 + Sbjct: 261 DLPFTWLEF 269 >gi|297568590|ref|YP_003689934.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Desulfurivibrio alkaliphilus AHT2] gi|296924505|gb|ADH85315.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Desulfurivibrio alkaliphilus AHT2] Length = 299 Score = 245 bits (627), Expect = 4e-63, Method: Composition-based stats. Identities = 85/265 (32%), Positives = 131/265 (49%), Gaps = 6/265 (2%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 +A ++ L V +++ + L + R L A+ R E + I+G +F+ Sbjct: 28 EAAIEADLLLGWVLNCDRAGLVLAAEQPLAEPLRQRLQAALKRRESREPLAYIMGEWEFW 87 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD---VVRILDLGTGTGAVCLALLKE 118 ++ + PRPETELLV+ ALAF RILDLGTG+G + + L +E Sbjct: 88 SLPFAVGPAVLIPRPETELLVEQALAFVRQLQRPPGGRYPWRILDLGTGSGILAVVLARE 147 Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL--FDVIVSNPPYIE 176 + V +D S AL +A++NA +GV+E+ + SDW S++ FD++V+NPPY+ Sbjct: 148 IASAQVVALDRSPAALAMARANARRHGVAEKITFVGSDWLSALAARPAFDLVVANPPYVC 207 Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236 + L EVR+ +P +LDGG GL + I + L DGL +EIG++QK Sbjct: 208 RSAMLTLQPEVREHEPHTALDGGRQGLDDIKIICRDLPAVLRPDGLLLLEIGWDQKTAAA 267 Query: 237 RIFESRK-LFLVNAFKDYGGNDRVL 260 +F D G RVL Sbjct: 268 ELFNRNPAYRQTEIINDLAGLPRVL 292 >gi|323127209|gb|ADX24506.1| putative methyltransferase [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 279 Score = 245 bits (627), Expect = 4e-63, Method: Composition-based stats. Identities = 76/246 (30%), Positives = 121/246 (49%), Gaps = 8/246 (3%) Query: 17 LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRP 76 SS ++ + + L + +H S + G F +++L++ PRP Sbjct: 34 WSSLDFLLHQNQEVSSDDCLLLEKIFMDLSQHLSPQYLTGRAYFRDLQLSVDQRVLIPRP 93 Query: 77 ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136 ETE LVD LA + + +LD+GTG+GA+ ++L KE P ++ DIS AL + Sbjct: 94 ETEELVDLILAEN-----PDTPLSVLDIGTGSGAIAISLKKERPAWQLTASDISSDALSL 148 Query: 137 AKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL 196 A+ NA + + SD FS + G FD+IVSNPPYI D +GL V +P ++L Sbjct: 149 AQDNASHYQLD--ITFIVSDVFSQLSGTFDMIVSNPPYIAYEDKDEVGLNVYQSEPHLAL 206 Query: 197 DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDYGG 255 DG + YR I + S +L++ G EIGY Q + + + V +D G Sbjct: 207 FAAEDGYAIYRRIIEEASNYLSEKGKLYFEIGYKQGEGIKALVNTHFPQKRVRVLRDVFG 266 Query: 256 NDRVLL 261 +R+++ Sbjct: 267 KERMVV 272 >gi|297559305|ref|YP_003678279.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296843753|gb|ADH65773.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 287 Score = 245 bits (627), Expect = 4e-63, Method: Composition-based stats. Identities = 75/266 (28%), Positives = 119/266 (44%), Gaps = 10/266 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 D+ V G+ ++ DS D R + R E + I G F Sbjct: 23 PRADAEELAAFVHGVRRGELHTVADSDFDAR----YWECVSRREAREPLQHITGRAYFRY 78 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L + F PRPETE++VD A+ + ++DLGTG+GA+ +++ +E P Sbjct: 79 LELRVGPGVFVPRPETEIMVDWAIQTLRAMDVADPL--VVDLGTGSGAIAISIAQEVPRS 136 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW---FSSVEGLFDVIVSNPPYIESVI 179 + V++ AL A+ N +G ++R + D + G D+++SNPPY+ + Sbjct: 137 RVHTVEVDPDALAWARRNIDASGHADRVTSHHGDMRTALPQLNGRVDLLISNPPYVPTRE 196 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 + EVRD+DP +L G DGL R + R L G +VE Q +D+ +F Sbjct: 197 AGAIPPEVRDYDPAPALWSGEDGLDMIRALEAVGRRLLRPGGAMAVEHHDGQGIDIPWLF 256 Query: 240 -ESRKLFLVNAFKDYGGNDRVLLFCR 264 E R V KD DR ++ R Sbjct: 257 PEDRGWRDVLNRKDLARRDRFVVMRR 282 >gi|307942490|ref|ZP_07657839.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Roseibium sp. TrichSKD4] gi|307774311|gb|EFO33523.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Roseibium sp. TrichSKD4] Length = 280 Score = 245 bits (627), Expect = 4e-63, Method: Composition-based stats. Identities = 93/261 (35%), Positives = 134/261 (51%), Gaps = 4/261 (1%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A D+ + + L +++ D ++ + + +A + + + RILG R+FY Sbjct: 22 ADLDARHLVSGLLDLHPSDLVLREDDLVSTDKIKVILDAQEQRQRGVPVGRILGVREFYG 81 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L++DT EPRP+TE+LVD+ L + R LD+GTGTGA+ +AL S Sbjct: 82 LEFQLNADTLEPRPDTEILVDTVLNIA----PTDTAWRFLDVGTGTGAIAIALAANSALA 137 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182 +G DIS AL AK+NA NGV R ++ + + G FD IVSNPPYI S +V Sbjct: 138 EGAASDISEHALLAAKANAAMNGVEGRLSFVRGSYLAPFSGQFDWIVSNPPYIASDVVRQ 197 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 L VR +DP +LDGG DGL YR + L G ++EIG++Q V + Sbjct: 198 LDTGVRAYDPLRALDGGADGLDAYRQLIPSAKELLAPSGHLALEIGFDQGKSVSSLCTDH 257 Query: 243 KLFLVNAFKDYGGNDRVLLFC 263 V KD G DRV+L Sbjct: 258 GYCGVEIIKDLAGQDRVVLAA 278 >gi|89095601|ref|ZP_01168495.1| modification methylase, HemK family protein [Bacillus sp. NRRL B-14911] gi|89089347|gb|EAR68454.1| modification methylase, HemK family protein [Bacillus sp. NRRL B-14911] Length = 292 Score = 245 bits (627), Expect = 4e-63, Method: Composition-based stats. Identities = 71/267 (26%), Positives = 113/267 (42%), Gaps = 9/267 (3%) Query: 3 ALRDS---HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRD 59 A RDS L +S +++ + LD R + A+ + I+G + Sbjct: 22 AGRDSNAGEILLGHFLNMSRSRLLAEMREELDTRMQGAFKEAVQLHADGRPVQYIIGKEE 81 Query: 60 FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119 FY ++ + PRPETE LV AL + D+GTG+GA+ + L ES Sbjct: 82 FYGRTFLVNENVLIPRPETEELVLEALKRKEKLFGREAASAAADIGTGSGAIAVTLKLES 141 Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIE 176 P + D+ +L+ AK NA NG + + D FD+I+SNPPYI Sbjct: 142 PDLQVTATDVYGPSLDTAKENADKNGAE--IEFILGDLLQPFIEESRKFDIIISNPPYIP 199 Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236 ++ + V + +P +L G DGL YR + + L + L E+G Q V Sbjct: 200 LSDMEGMSEVVTENEPHRALFAGQDGLDLYRRFMEELPLVLKEKSLVGFEVGAGQSKAVS 259 Query: 237 RIFESR-KLFLVNAFKDYGGNDRVLLF 262 + + ++ D G DR++ Sbjct: 260 ELLRTAFPDANIDIVYDINGKDRMVFA 286 >gi|300871385|ref|YP_003786258.1| protein methyltransferase [Brachyspira pilosicoli 95/1000] gi|300689086|gb|ADK31757.1| protein methyltransferase [Brachyspira pilosicoli 95/1000] Length = 288 Score = 245 bits (627), Expect = 4e-63, Method: Composition-based stats. Identities = 72/262 (27%), Positives = 130/262 (49%), Gaps = 11/262 (4%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 +S + L V ++ ++I D L ++ + I R L +E I I+ ++FY Sbjct: 27 ESQTILMHVLNINKMKLISDSLRELTQKEVNNIEELINRRLNYEPISYIINKKEFYGFNF 86 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK----ESPF 121 + ++ PRPETE L+D L + ++ ++ + I D+G G+G + + L K ++ Sbjct: 87 YVDNNVLIPRPETEELIDLVLDY----MKDKNNISICDIGGGSGNIAITLKKLFLEQNKN 142 Query: 122 FKGVGVDISCKALEIAKSNAVT-NGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVI 179 ++IS A ++ K NA+ G + + + +D + + E +DVIVSN PY+ Sbjct: 143 IDITAIEISEGAFQVIKKNALNILGDEKLINIVNTDALTFIPENKYDVIVSNAPYVPLRD 202 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 D L + +F+P+ +L G DGL Y+ + ++L +G+ EI Y+Q ++ I Sbjct: 203 KDSLQKD-LEFEPQNALYSGYDGLDFYKAFLSIIKKYLKDNGVFFFEISYDQGEALINIC 261 Query: 240 ESRKLFLVNAFKDYGGNDRVLL 261 S + V KD G DR L+ Sbjct: 262 NSLNIKNVLVKKDLNGKDRFLV 283 >gi|146296535|ref|YP_001180306.1| HemK family modification methylase [Caldicellulosiruptor saccharolyticus DSM 8903] gi|145410111|gb|ABP67115.1| modification methylase, HemK family [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 289 Score = 245 bits (627), Expect = 4e-63, Method: Composition-based stats. Identities = 64/262 (24%), Positives = 120/262 (45%), Gaps = 8/262 (3%) Query: 4 LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63 R + + ++ + Q I++ + +++ + +A + + F + Sbjct: 32 KRIAILLVSQILNIDKSQAILEKNLTIEEEDYQRIISAAKKYTMDFPLQYCTNKAYFMGL 91 Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 + D PR +TE L++ A+ +++ + LD+GTG+G + +AL K K Sbjct: 92 EFYVDEDVLIPRFDTETLIEVAIEL----FNRKENLNFLDVGTGSGCIAIALCKFL-DCK 146 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVD 181 + VDIS AL +A+ NA NGV ++ ++S+ F ++ FD I SNPPYI + Sbjct: 147 VIAVDISENALRVAEKNAKLNGVFDKIHFVKSNLFENIPPSLKFDAIFSNPPYISENEIS 206 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 L V +P+ +L +GL +++ IA ++L K G E+GY Q V +I + Sbjct: 207 MLDKRVLK-EPKQALFSKENGLYYFQEIAKNARQYLKKGGYIIFEVGYRQSQHVKKILKD 265 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 + + D +R + Sbjct: 266 LGYVDIKSKNDLNNIERCVYAT 287 >gi|84516321|ref|ZP_01003681.1| modification methylase, HemK family [Loktanella vestfoldensis SKA53] gi|84510017|gb|EAQ06474.1| modification methylase, HemK family [Loktanella vestfoldensis SKA53] Length = 277 Score = 245 bits (627), Expect = 4e-63, Method: Composition-based stats. Identities = 92/257 (35%), Positives = 128/257 (49%), Gaps = 25/257 (9%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 +S VTG S+H + R + +LG+RDFY Sbjct: 35 DPGHESRLIWAHVTGDSAH-----------------FAALVARRAARAPLSHLLGYRDFY 77 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 + R ++ D +PRP+TE +V +ALA +LDLGTG+G + L+LL P Sbjct: 78 DHRFIVTPDVLDPRPDTEAIVTAALA--------DPFAHVLDLGTGSGCILLSLLAARPQ 129 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181 G+GVD+S AL +A N G+ +R ++SDWF++V G FD+IVSNPPYI + + Sbjct: 130 ATGLGVDLSDAALAVAAQNRSALGLDQRATLVRSDWFTAVTGSFDLIVSNPPYIAATEMA 189 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 L EVR +P ++L G DGLS+YR IA G HL G VEIG Q DV + + Sbjct: 190 GLQPEVRLHEPHLALTDGADGLSYYRIIAAGAGAHLAPGGRLIVEIGPTQASDVSALLRA 249 Query: 242 RKLFLVNAFKDYGGNDR 258 + D G DR Sbjct: 250 AGFTDLRVIPDLDGRDR 266 >gi|296331339|ref|ZP_06873811.1| glutamine methylase of release factor 1 (and perhaps others) at a GGQ site [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305676325|ref|YP_003867997.1| glutamine methylase [Bacillus subtilis subsp. spizizenii str. W23] gi|296151454|gb|EFG92331.1| glutamine methylase of release factor 1 (and perhaps others) at a GGQ site [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305414569|gb|ADM39688.1| glutamine methylase of release factor 1 (and perhaps others) at a GGQ site [Bacillus subtilis subsp. spizizenii str. W23] Length = 288 Score = 245 bits (626), Expect = 5e-63, Method: Composition-based stats. Identities = 71/266 (26%), Positives = 115/266 (43%), Gaps = 9/266 (3%) Query: 2 QALRD---SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWR 58 +A R+ + L TG+ +++ + + + + + + + I+G Sbjct: 17 EAGREENAAELLLLYDTGMDRSKLLASLQEPIGEDELYRFKRHVEMHKEGVPVQYIIGKE 76 Query: 59 DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118 FY ++ D PRPETE +V L + + ++D+GTG+GA+ + L E Sbjct: 77 FFYGREFMVNDDVLIPRPETEEVVYHLLEKYRHVFSEDSRLEVVDVGTGSGAIAVTLALE 136 Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYI 175 + F VDIS +AL++A +NA T G Q D D++VSNPPYI Sbjct: 137 NKNFSVSAVDISKEALQVASANAETLGAD--VHFYQGDLLEPFIKEGKKADIVVSNPPYI 194 Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235 + L VR +P +L G DGL Y+ + + + EIG+ Q V Sbjct: 195 SEGEMADLSEIVRFHEPLHALTDGGDGLKFYKRFMEDIPLVMKDKVFVVFEIGWQQGAAV 254 Query: 236 VR-IFESRKLFLVNAFKDYGGNDRVL 260 I ++ K V KD G DR + Sbjct: 255 KELILKTFKGAEVEVLKDINGKDRTI 280 >gi|260172133|ref|ZP_05758545.1| putative protoporphyrinogen oxidase [Bacteroides sp. D2] gi|315920442|ref|ZP_07916682.1| conserved hypothetical protein [Bacteroides sp. D2] gi|313694317|gb|EFS31152.1| conserved hypothetical protein [Bacteroides sp. D2] Length = 278 Score = 245 bits (626), Expect = 5e-63, Method: Composition-based stats. Identities = 80/260 (30%), Positives = 116/260 (44%), Gaps = 12/260 (4%) Query: 9 SFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLS 68 C + GL + + + D +L + ++ L N I R K+E I I G+ +F ++ Sbjct: 27 LICCDMLGLDALDIYMGKDIILSECKQRELENIIFRLQKNEPIQYIRGFAEFCGRNFKVA 86 Query: 69 SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128 S PRPET LV+ + E + +LD+GTG+G + ++L K+ P D Sbjct: 87 SGVLIPRPETAELVELIVK------ENPNARHLLDIGTGSGCIAISLDKKLPDVDVEAWD 140 Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL---FDVIVSNPPYIESVIVDCLGL 185 IS +AL IA+ N RF LQ D S FDVIVSNPPY+ + + Sbjct: 141 ISEEALAIARKNNEDLEAGVRF--LQRDVLSDDWEKVPSFDVIVSNPPYVTETEKNEMDA 198 Query: 186 EVRDFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 V D++P ++L D L Y IA S L G EI + I E + Sbjct: 199 NVLDWEPGLALFVPDEDPLRFYNRIACLGSDLLLPGGKLYFEINQAYGRETAHILEMNQY 258 Query: 245 FLVNAFKDYGGNDRVLLFCR 264 V KD G DR++ R Sbjct: 259 RDVRVIKDIFGKDRIVTANR 278 >gi|270308381|ref|YP_003330439.1| modification methylase, HemK family [Dehalococcoides sp. VS] gi|270154273|gb|ACZ62111.1| modification methylase, HemK family [Dehalococcoides sp. VS] Length = 277 Score = 245 bits (626), Expect = 5e-63, Method: Composition-based stats. Identities = 69/260 (26%), Positives = 115/260 (44%), Gaps = 10/260 (3%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 +A ++ L G+S Q+ ++ + L + + L+ I G ++FY Sbjct: 21 EARLEAEILLRHTLGISRVQLHLELERELHPNKETAYFQTLKHRLEGVPSAYITGEKEFY 80 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 + PRPETE L++ AL + + I D+GTG+GA+ + L E Sbjct: 81 GRTFQVDKRVLIPRPETEHLIEKALRIARS----YESPYIADIGTGSGAIAITLALELKD 136 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181 DIS +ALEIA++NA + +R + D S+ + D++ +N PY+ + Sbjct: 137 AYVYATDISAEALEIARNNAAEYRLGKRLTFYRGDLLESLPEMVDILTANLPYVPTTETK 196 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 L +P ++LDGG DGL YR + + L G +EIG +Q + + + Sbjct: 197 LLKG-----EPLLALDGGADGLDIYRRLIPVLPGKLRPGGTALLEIGIHQSEVLAKYIKE 251 Query: 242 R-KLFLVNAFKDYGGNDRVL 260 V DY G RV+ Sbjct: 252 YLPQAAVEISPDYAGIPRVV 271 >gi|300702901|ref|YP_003744502.1| n5-glutamine methyltransferase, modifies release factors rf-1 and rf-2 [Ralstonia solanacearum CFBP2957] gi|299070563|emb|CBJ41858.1| N5-glutamine methyltransferase, modifies release factors RF-1 and RF-2 [Ralstonia solanacearum CFBP2957] Length = 281 Score = 245 bits (626), Expect = 5e-63, Method: Composition-based stats. Identities = 86/267 (32%), Positives = 121/267 (45%), Gaps = 11/267 (4%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 ++ + VTGLS Q+I +D+ R L R L E + +LG R+F+ Sbjct: 14 PALEARMLVSHVTGLSRVQLITQDTYAIDNGVRTRLAELATRRLAGEPMAYLLGEREFFG 73 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 ++ PRP+TELLV+ AL RIE RD +LDLGTG+G + + + Sbjct: 74 RLFQVTPAVLIPRPDTELLVEQALD----RIEDRDAPDVLDLGTGSGIIAVTIALARRDA 129 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-----FDVIVSNPPYIES 177 + D S AL +A NA G + DW+ ++ FD+IVSNPPYI S Sbjct: 130 RVWATDASADALAVAAGNAQALGAA-NVHVAHGDWYGALPESDAPPAFDLIVSNPPYIAS 188 Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237 ++R F+P +L DGL H RTI G L DG +E GY+Q V Sbjct: 189 ADAHLGQGDLR-FEPAGALTDHGDGLRHLRTIVAGAPARLAADGWLLLEHGYDQGPAVRA 247 Query: 238 IFESRKLFLVNAFKDYGGNDRVLLFCR 264 + V +D G+DR R Sbjct: 248 LLAEAGFADVFTARDLAGHDRCSGGRR 274 >gi|224025263|ref|ZP_03643629.1| hypothetical protein BACCOPRO_02000 [Bacteroides coprophilus DSM 18228] gi|224018499|gb|EEF76497.1| hypothetical protein BACCOPRO_02000 [Bacteroides coprophilus DSM 18228] Length = 279 Score = 245 bits (626), Expect = 5e-63, Method: Composition-based stats. Identities = 74/264 (28%), Positives = 115/264 (43%), Gaps = 6/264 (2%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 +A + L + + + D+ +R L N + R +E + I+G F Sbjct: 20 EAAAMARWILTDLFHFGTLDLYAGKDTDFPTDERARLNNILTRLKSYEPLQYIIGETRFS 79 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 + ++ PRPETE LV + VRILD+GTG+G + ++L P Sbjct: 80 GLPFEVTPSVLIPRPETEELVSWIVEDH-----PDVPVRILDIGTGSGCIPVSLAHRLPL 134 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181 D+S +ALE+A+ NA+ NGV+ F + + S DV+VSNPPYI Sbjct: 135 STVHAWDVSPEALEVARRNAIRNGVTVHFQQVDALQESWPSLNIDVLVSNPPYITEKERT 194 Query: 182 CLGLEVRDFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 + V D++P ++L D L YR IA L+ G EI + V + + Sbjct: 195 DMERNVLDWEPELALFVPDNDPLLFYRHIARIGLDLLSPSGTLYYEINRAYGAETVSLLQ 254 Query: 241 SRKLFLVNAFKDYGGNDRVLLFCR 264 V KD GNDR++ + Sbjct: 255 QLGYHSVELRKDLSGNDRMVKAVK 278 >gi|163850387|ref|YP_001638430.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Methylobacterium extorquens PA1] gi|163661992|gb|ABY29359.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Methylobacterium extorquens PA1] Length = 296 Score = 245 bits (626), Expect = 5e-63, Method: Composition-based stats. Identities = 95/265 (35%), Positives = 142/265 (53%), Gaps = 6/265 (2%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 A D+ L + L+ + + L + A R L E + RILG +F+ Sbjct: 29 NARSDARFLLLHILSLTPLDLTLRGREPLGAAGAEAIRQAAERRLAGEPVARILGAWEFW 88 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 + L +T PRP+TE +V++AL E+ +R++DLGTG+G + +ALL E P Sbjct: 89 GLPFALGPETLVPRPDTESVVETALRLL---PEREQPLRLIDLGTGSGCILVALLHERPG 145 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181 G+G+D S AL +A+ NA NGV++R L W +++G FD+IVSNPPYI + ++ Sbjct: 146 ALGIGLDRSAAALAVARRNAAANGVADRAAFLCGSWLDALKGPFDLIVSNPPYIAAPVIA 205 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR---HLNKDGLCSVEIGYNQKVDVVRI 238 L EVR DP+ +LDGG DGL YR I V+R L+ G +EIGY+Q + R+ Sbjct: 206 TLEPEVRLHDPQAALDGGADGLDAYRAILADVARRPGLLSAQGALVLEIGYDQANALTRL 265 Query: 239 FESRKLFLVNAFKDYGGNDRVLLFC 263 + + +D GNDRV+ Sbjct: 266 AQEAGFEDIGVGRDLAGNDRVVTLR 290 >gi|256839099|ref|ZP_05544609.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Parabacteroides sp. D13] gi|256740018|gb|EEU53342.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Parabacteroides sp. D13] Length = 318 Score = 245 bits (626), Expect = 5e-63, Method: Composition-based stats. Identities = 82/300 (27%), Positives = 126/300 (42%), Gaps = 46/300 (15%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 +A + RV GLS+HQ+++ L D ++F + + ++ I +LG DFY Sbjct: 20 EAQALVRLIMERVCGLSTHQLLLGKGKELSDTEKFKIKEIVEGLRLYKPIQYLLGIADFY 79 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 + ++ D PRPET LV+ + + RILD+GTG+G + ++L K P Sbjct: 80 GMEFKVTPDVLIPRPETAELVERIITDY-----QGQAPRILDIGTGSGCIAISLAKHLPK 134 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSE---------------------------RFDTLQ 154 + VDIS +AL +A+ NA N VS RF + Sbjct: 135 AEVAAVDISPEALAMAEENARMNQVSVSFHELDILSEGYSSFMQEKQNFHVRETRFSCTR 194 Query: 155 SDWF-------------SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD-GGI 200 + F +S+ G + IVSNPPYI + V + +P ++L Sbjct: 195 NKIFTYVKLKSHTEETEASLIGNLNCIVSNPPYIMYREKATMEANVLENEPHLALFVPDD 254 Query: 201 DGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 D L YR IA RHL + G EI + V + V +D G DR++ Sbjct: 255 DPLLFYRAIARFGQRHLVEGGHLYFEINALCGKETVAMLRQENYTEVELIQDLYGKDRIV 314 >gi|254559641|ref|YP_003066736.1| protein-( glutamine-N5) methyltransferase [Methylobacterium extorquens DM4] gi|254266919|emb|CAX22718.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Methylobacterium extorquens DM4] Length = 302 Score = 245 bits (626), Expect = 5e-63, Method: Composition-based stats. Identities = 98/265 (36%), Positives = 143/265 (53%), Gaps = 6/265 (2%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 A D+ L + L+ + + L L A R L E + RILG +F+ Sbjct: 35 NARSDARFLLLHILSLTPLDLTLRGREPLGAAGAEALRQAAERRLAGEPVARILGAWEFW 94 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 + L +T PRP+TE +V++AL E+ +R++DLGTG+G + +ALL E P Sbjct: 95 GLSFALGPETLVPRPDTESVVETALRLL---PERERPLRLIDLGTGSGCILVALLHERPG 151 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181 G+G+D S AL IA+ NA NGV++R L W +++EG FD+IVSNPPYI + ++ Sbjct: 152 ALGIGLDRSAAALAIARRNAAANGVADRAAFLCGSWLNALEGPFDLIVSNPPYIAAPVIA 211 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR---HLNKDGLCSVEIGYNQKVDVVRI 238 L EVR DP+ +LDGG DGL YR I V+R L+ G +EIGY+Q + R+ Sbjct: 212 TLEPEVRLHDPQAALDGGADGLDAYRAILADVARRPGLLSAQGALVLEIGYDQANALTRL 271 Query: 239 FESRKLFLVNAFKDYGGNDRVLLFC 263 + + +D GNDRV+ Sbjct: 272 AQEAGFEDIGVGQDLAGNDRVVTLR 296 >gi|298482443|ref|ZP_07000629.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacteroides sp. D22] gi|295088114|emb|CBK69637.1| HemK family putative methylases [Bacteroides xylanisolvens XB1A] gi|298271422|gb|EFI12997.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacteroides sp. D22] Length = 278 Score = 245 bits (626), Expect = 5e-63, Method: Composition-based stats. Identities = 78/260 (30%), Positives = 117/260 (45%), Gaps = 12/260 (4%) Query: 9 SFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLS 68 C + GL + + + D +L + ++ L N I R K+E I I G +F ++ Sbjct: 27 LICCDMLGLDALDIYMGKDIILSECKQRELENIIFRLQKNEPIQYIHGIAEFCGRNFKVA 86 Query: 69 SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128 S PRPET LV+ + E + R+LD+GTG+G + ++L K+ P K D Sbjct: 87 SGVLIPRPETAELVELIVE------ENPNARRLLDIGTGSGCIAISLDKKLPDAKVEAWD 140 Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL---FDVIVSNPPYIESVIVDCLGL 185 IS +AL IA+ N + R LQ D + FDVIVSNPPY+ + + Sbjct: 141 ISEEALAIARKNNDA--LEARVRFLQRDVLADDWEKIPSFDVIVSNPPYVTETEKNEMDA 198 Query: 186 EVRDFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 V +++P ++L D L Y IA S L G EI + I E + Sbjct: 199 NVLEWEPGLALFVPDEDPLRFYNRIARLGSELLLPGGKLYFEINQAYGRETAHILEMNQY 258 Query: 245 FLVNAFKDYGGNDRVLLFCR 264 V +D G DR++ R Sbjct: 259 RDVRVIRDIFGKDRIVTANR 278 >gi|119509583|ref|ZP_01628730.1| protoporphyrinogen oxidase [Nodularia spumigena CCY9414] gi|119465772|gb|EAW46662.1| protoporphyrinogen oxidase [Nodularia spumigena CCY9414] Length = 304 Score = 245 bits (626), Expect = 5e-63, Method: Composition-based stats. Identities = 73/265 (27%), Positives = 112/265 (42%), Gaps = 11/265 (4%) Query: 9 SFLCRVTGLSSHQVIVDPDSVLDDRQ----RFFLTNAIVRSLK-HESIHRILGWRDFYNV 63 L V GL + ++ + Q L R L + I G + Sbjct: 37 WLLLEVAGLDRLALRLESFKESPEIQMALPLEDLEQLWQRRLNERLPVQYITGVTPWRQF 96 Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKR--DVVRILDLGTGTGAVCLALLKESPF 121 ++ +S+ PRPETE L+D A+A + + DLGTG+GA+ L L P Sbjct: 97 KIAVSNAVLIPRPETEYLIDLAVAAATKSGAAPFLNSGHWADLGTGSGAIALGLADAFPK 156 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESV 178 VD S +AL+IA+ NA G + Q W+ + +G F +VSNPPYI + Sbjct: 157 ATIHAVDYSPEALKIARDNARNLGFDNQIKFYQGSWWEPLAALKGEFSGMVSNPPYIPTS 216 Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238 V L EV +P ++LDGG DGL R + + +L G+ +E+ Q V + Sbjct: 217 TVATLQPEVVKHEPHLALDGGSDGLDCIRQLIEISPGYLRPGGVWLIEMMAGQADTVRTL 276 Query: 239 FESRK-LFLVNAFKDYGGNDRVLLF 262 + + D G +R + Sbjct: 277 LAKQGSYCNIQIHADLAGIERFAIA 301 >gi|223983552|ref|ZP_03633735.1| hypothetical protein HOLDEFILI_01016 [Holdemania filiformis DSM 12042] gi|223964480|gb|EEF68809.1| hypothetical protein HOLDEFILI_01016 [Holdemania filiformis DSM 12042] Length = 284 Score = 245 bits (626), Expect = 6e-63, Method: Composition-based stats. Identities = 78/259 (30%), Positives = 122/259 (47%), Gaps = 8/259 (3%) Query: 7 SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66 + FL ++ S+ + + + + R LK E + +LG+ FY R Sbjct: 25 AQVFLLELSQKESYDLYLHYEDEAPAELVEQYQAGMKRILKQEPMQYVLGYSWFYGYRFQ 84 Query: 67 LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126 ++ + PRPETE LV + LA + + +D+GTG+GA+ L+L KE P + Sbjct: 85 VNENVLIPRPETEELVANILADLDEYFAEAKTIDAVDIGTGSGAIALSLAKEEPKIRMSA 144 Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIVDCL 183 DIS +A+E+AK+NA + GV L D V D+++ NPPYI L Sbjct: 145 TDISAEAVEVAKANAASLGVD--VKFLVGDMAQPVIDAGMKVDLLICNPPYIPQEE--TL 200 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR- 242 V+D++P ++L GG DGL YR + + L + + EIG+NQK ++ Sbjct: 201 EASVKDYEPHVALFGGEDGLKFYRQVFAAAPQVLKDKAMMAFEIGWNQKAALLAEVRKTF 260 Query: 243 KLFLVNAFKDYGGNDRVLL 261 KD G DR+L Sbjct: 261 GDVRAEVVKDINGKDRMLF 279 >gi|322389536|ref|ZP_08063087.1| protein-(glutamine-N5) methyltransferase [Streptococcus parasanguinis ATCC 903] gi|321143811|gb|EFX39238.1| protein-(glutamine-N5) methyltransferase [Streptococcus parasanguinis ATCC 903] Length = 278 Score = 245 bits (625), Expect = 7e-63, Method: Composition-based stats. Identities = 73/260 (28%), Positives = 117/260 (45%), Gaps = 11/260 (4%) Query: 6 DSHSF--LCRVT-GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 ++ S R + ++ ++ + L + + H I+G +F Sbjct: 20 EAESLSFAYRALKNWTFTDFVLALQKEVEVEDQALLLSIFEQLKHHVPAQYIIGSAEFCG 79 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 T+ PRPETE LV L + +R+LD+GTG+GA+ ++L P + Sbjct: 80 HVFTVDERVLIPRPETEELVALILEEN-----DEKALRVLDIGTGSGAIAISLALARPTW 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182 + D+S +AL +A+ NA + + SD +EG +D+IVSNPPYI V+ Sbjct: 135 QVQASDVSEEALALAQENAKQLEAA--LEFKSSDVLDELEGPYDLIVSNPPYISRDDVEE 192 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 +G V +P ++L DG + Y IA L DG +EIGY Q V +F+ Sbjct: 193 VGANVLASEPHLALFADRDGYAIYEKIAQQAPSVLTPDGKIYLEIGYKQGAKVKELFQEA 252 Query: 243 -KLFLVNAFKDYGGNDRVLL 261 V KD G DR+++ Sbjct: 253 FPDKRVRVLKDQFGQDRMVV 272 >gi|117617744|ref|YP_857648.1| protein methyltransferase HemK [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117559151|gb|ABK36099.1| protein methyltransferase HemK [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 282 Score = 245 bits (625), Expect = 7e-63, Method: Composition-based stats. Identities = 84/268 (31%), Positives = 123/268 (45%), Gaps = 15/268 (5%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 D+ + LC + ++ P+ LD Q L + R L E I ++G R+F++ Sbjct: 20 PRADADALLCHLLECRRSYLMTWPERELDAAQLATLQGWLERRLNGEPIAHLIGEREFWS 79 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +S T PRP+TE+LV+ AL +LDLGTGTGA+ LAL E P Sbjct: 80 LPLKVSPATLIPRPDTEVLVEQALGRL-----PAGPCAVLDLGTGTGAIALALKSERPDA 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-------EGLFDVIVSNPPYI 175 VD A +A++N+ G+ + WF + F +IVSNPPYI Sbjct: 135 DVWAVDRMPAAAALARANSAALGLP--IEVRDGSWFEPLVEPSSSKAPRFAMIVSNPPYI 192 Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235 + +VR F+PR +L GL+ R I G HL G +E G+ Q V Sbjct: 193 DGADPHLDEGDVR-FEPRSALVADEQGLADIRLIVAGAPAHLLPGGWLLLEHGWQQGEAV 251 Query: 236 VRIFESRKLFLVNAFKDYGGNDRVLLFC 263 ++ + V +DYG N+RV L Sbjct: 252 RQLLLQQGYLQVETVRDYGDNERVTLGR 279 >gi|45656171|ref|YP_000257.1| protoporphyrinogen oxidase [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|45599405|gb|AAS68894.1| protoporphyrinogen oxidase [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 286 Score = 245 bits (625), Expect = 7e-63, Method: Composition-based stats. Identities = 67/265 (25%), Positives = 122/265 (46%), Gaps = 7/265 (2%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A D+ L + L ++ V+ + +L++ ++ I+ K++ I + FYN Sbjct: 26 ARLDAEILLADLLNLQRVKLYVNFERLLNETEKNAYRERILERSKNKPTAYITSQKAFYN 85 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 ++ + PRPETE LV+ L+ I +++ +LDL TG+G + ++L + Sbjct: 86 SIFFVNENVLIPRPETEELVEKVLSDFKGNIGEQN---VLDLCTGSGCIGISLKLARKDW 142 Query: 123 KGVGVDISCKALEIAKSNA-VTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVI 179 DIS +ALE+A NA G + L+SD F S+ E F++IV+NPPYI Sbjct: 143 NITLSDISKEALEVAAKNAIQILGEEKHIQFLESDLFLSIPKESKFNLIVTNPPYIPISD 202 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 + +V D++P ++L + T+ L + G +EI + ++ Sbjct: 203 KAEMMKDVIDYEPHLALF-LENPKDFLSTLIAQAHERLVEGGKLYMEILPSLSETIISDS 261 Query: 240 ESRKLFLVNAFKDYGGNDRVLLFCR 264 ++ KD G +R ++ R Sbjct: 262 IAKGWENGKIEKDLSGKERFVILTR 286 >gi|189464286|ref|ZP_03013071.1| hypothetical protein BACINT_00627 [Bacteroides intestinalis DSM 17393] gi|189438076|gb|EDV07061.1| hypothetical protein BACINT_00627 [Bacteroides intestinalis DSM 17393] Length = 278 Score = 245 bits (625), Expect = 7e-63, Method: Composition-based stats. Identities = 80/267 (29%), Positives = 115/267 (43%), Gaps = 12/267 (4%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 +A S C + G S + D L + L + + R E I ILG F Sbjct: 20 EAGNLSRLICCEILGQSVVDYYLGKDITLSAKAEQELQSLLRRLRNFEPIQYILGEARFL 79 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 ++S PRPETE LV+ L E R+LD+GTG+G + L KE P Sbjct: 80 GRTFQVASGVLIPRPETEELVEIMLK------EISSTSRVLDIGTGSGCIAATLAKELPG 133 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG---LFDVIVSNPPYIESV 178 + D+S +AL IA +N++ V F+ Q D + + G +DVIVSNPPY+ Sbjct: 134 AQVTAWDVSEEALAIAAANSLALQVPVCFE--QRDVLTYIPGVTERYDVIVSNPPYVTEA 191 Query: 179 IVDCLGLEVRDFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237 + V D++P ++L D L YR I+ L DG EI D+V Sbjct: 192 EKQDMERNVLDWEPSLALFVPDADPLRFYRRISVLGLEILEPDGKLYFEINRTFGEDIVL 251 Query: 238 IFESRKLFLVNAFKDYGGNDRVLLFCR 264 + V KD NDR ++ + Sbjct: 252 MMRELGYRFVRLQKDISHNDRFVIAQK 278 >gi|83747501|ref|ZP_00944539.1| Peptide release factor-glutamine N5-methyltransferase [Ralstonia solanacearum UW551] gi|207744460|ref|YP_002260852.1| methylase of polypeptide chain release factors protein [Ralstonia solanacearum IPO1609] gi|83725815|gb|EAP72955.1| Peptide release factor-glutamine N5-methyltransferase [Ralstonia solanacearum UW551] gi|206595866|emb|CAQ62793.1| methylase of polypeptide chain release factors protein [Ralstonia solanacearum IPO1609] Length = 309 Score = 244 bits (624), Expect = 8e-63, Method: Composition-based stats. Identities = 86/267 (32%), Positives = 121/267 (45%), Gaps = 11/267 (4%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 ++ + VTGLS Q+I +D+ R L R L E + +LG R+F+ Sbjct: 42 PALEARMLVSHVTGLSRVQLITQDTYAIDNGVRMRLAELATRRLAGEPMAYLLGEREFFG 101 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 ++ PRP+TELLV+ AL RIE RD +LDLGTG+G + + + Sbjct: 102 RLFQVTPAVLIPRPDTELLVEQALD----RIEDRDAPDVLDLGTGSGIIAVTIALARRDA 157 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-----FDVIVSNPPYIES 177 + D S AL +A NA T + DW+ ++ FD+IVSNPPYI S Sbjct: 158 RVWATDASADALAVAAGNAQTLDAA-NVHVALGDWYGALPESDAPPAFDLIVSNPPYIAS 216 Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237 ++R F+P +L DGL H RTI G L DG +E GY+Q V Sbjct: 217 ADAHLDQGDLR-FEPAGALTDHGDGLRHLRTIVAGAPARLAADGWLLLEHGYDQGPAVRA 275 Query: 238 IFESRKLFLVNAFKDYGGNDRVLLFCR 264 + V +D G+DR R Sbjct: 276 LLAEAGFADVFTAQDLAGHDRCSGGRR 302 >gi|124265715|ref|YP_001019719.1| hemK protein [Methylibium petroleiphilum PM1] gi|124258490|gb|ABM93484.1| hemK protein [Methylibium petroleiphilum PM1] Length = 275 Score = 244 bits (624), Expect = 8e-63, Method: Composition-based stats. Identities = 77/257 (29%), Positives = 115/257 (44%), Gaps = 10/257 (3%) Query: 4 LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63 D+ L V ++ D LD + + R E + +LG ++F+ + Sbjct: 21 RLDAQCLLSAVLARPRSWLLAHADEALDPQAARHYDALLARRAAGEPLAYVLGEKEFFGL 80 Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 RL ++ D PR +TE LV+ AL +E + DLGTG+GA+ LAL P + Sbjct: 81 RLEVTPDVLIPRADTETLVEWALELLPCNVE----TAVADLGTGSGAIALALAARRPTCR 136 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDC 182 VD S AL +A+ N G++ + SDWFS++EG F +IVSNPPYI Sbjct: 137 VTAVDASSDALAVAERNGGRLGLA--VEWRLSDWFSALEGRRFALIVSNPPYIADGDCHL 194 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 + +P+ +L G DGL+ R I + L G +E GY+Q V + Sbjct: 195 ---DALTHEPQRALTSGPDGLAAIRHIVASAASFLTAGGWLLIEHGYDQAEAVQALLGVA 251 Query: 243 KLFLVNAFKDYGGNDRV 259 + D GG R Sbjct: 252 GFEHIATRHDLGGQPRC 268 >gi|88810846|ref|ZP_01126103.1| HemK protein [Nitrococcus mobilis Nb-231] gi|88792476|gb|EAR23586.1| HemK protein [Nitrococcus mobilis Nb-231] Length = 283 Score = 244 bits (624), Expect = 8e-63, Method: Composition-based stats. Identities = 78/260 (30%), Positives = 121/260 (46%), Gaps = 7/260 (2%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 A D+ L + + ++ P+ L + R + + G R+F+ Sbjct: 24 NARLDAEVLLAGLLAVERSYLLTWPERRLPPAVLARYRAQVARRASGYPVAYLTGIREFW 83 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 ++ L ++ T PRPETE LV+ ALA + +LDLGTG+GAV LA+ E P Sbjct: 84 SLELRVTPATLIPRPETEGLVEVALA----SLTGITQPMVLDLGTGSGAVGLAIATERPD 139 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIV 180 V VD +AL +A+ NA G+ R L DW E F +IV+NPPY++ Sbjct: 140 ATVVAVDTCPRALAVARCNARRLGLQ-RVQFLLGDWLEPAGERRFHLIVANPPYVDPAEP 198 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 + +R F+P +L GL+ R I G +L+ G+ +VE GY Q V +F+ Sbjct: 199 ELRCASLR-FEPPTALLAPEQGLAELRRIVSGALTNLHHGGVLAVEHGYRQGAAVRTLFQ 257 Query: 241 SRKLFLVNAFKDYGGNDRVL 260 + ++ D G+ RV Sbjct: 258 TAGFEEIHTELDLQGHPRVT 277 >gi|170759851|ref|YP_001785467.1| HemK family modification methylase [Clostridium botulinum A3 str. Loch Maree] gi|169406840|gb|ACA55251.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Clostridium botulinum A3 str. Loch Maree] Length = 283 Score = 244 bits (624), Expect = 9e-63, Method: Composition-based stats. Identities = 71/262 (27%), Positives = 120/262 (45%), Gaps = 7/262 (2%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L ++ ++ +PD + D ++ I I ILG +F + Sbjct: 25 DAQLLLGKILKKDRLFILTNPDYHIKDEEKEKYFQLIELRKNKMPIKYILGTTEFMGLDF 84 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 + PRP+TE+LV++ L I+ ++ +I D+ G+G + + + + + Sbjct: 85 NIEKGVLIPRPDTEILVETVLE----EIKNKNYKQICDVCCGSGIIGITIGYTLNNTEII 140 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIVDC 182 DI K N + + + +R L+SD + + FD+IVSNPPYI+ +++ Sbjct: 141 CYDIEDIPYNTTKENILKHNLQDRIKVLKSDLLTEAIKEKRKFDLIVSNPPYIKEDVIET 200 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 L +V+ ++P +L GG DGL Y I LN G + EIGY+QK+ V I Sbjct: 201 LMDDVKKYEPLEALCGGKDGLFFYEGIIKQSLEVLNDGGTIAFEIGYDQKIQVSHILNEY 260 Query: 243 KLFLVNAFKDYGGNDRVLLFCR 264 V KD G DRV+ + Sbjct: 261 GFKDVLCIKDLAGRDRVIKARK 282 >gi|269123394|ref|YP_003305971.1| modification methylase, HemK family [Streptobacillus moniliformis DSM 12112] gi|268314720|gb|ACZ01094.1| modification methylase, HemK family [Streptobacillus moniliformis DSM 12112] Length = 359 Score = 244 bits (624), Expect = 9e-63, Method: Composition-based stats. Identities = 79/258 (30%), Positives = 120/258 (46%), Gaps = 7/258 (2%) Query: 9 SFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSL-KHESIHRILGWRDFYNVRLTL 67 + + + + + + Q+ L + + + + K I I + FY + Sbjct: 104 IIFSNLLNIDMSLLFTKYSNSITEDQKNRLRDILKKIVDKKIPIQYIFNEQVFYGYSFYV 163 Query: 68 SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 + PR +TE +V+ AL I K + ++LD+GTG+GA+ L + E+ K + Sbjct: 164 DKNVLIPRIDTEFVVEKALEL----INKINNPKVLDIGTGSGAIALVIGLENRESKILAT 219 Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLE 186 DIS AL+IAK N+ V E L SD FS V FD+IVSNPPYI + +G Sbjct: 220 DISENALKIAKKNSEILNV-ENVKFLHSDLFSEVSYKEFDLIVSNPPYISRDEIGIMGEN 278 Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246 V +P+ +L GL Y I+ HL DG EIGY+Q V I E+ Sbjct: 279 VLLHEPQNALFAEDGGLYFYFEISKNAKNHLKNDGYLLFEIGYSQGNKVKDIMENMGYID 338 Query: 247 VNAFKDYGGNDRVLLFCR 264 V+ KD GN+R + + Sbjct: 339 VSIGKDLTGNERYVFGRK 356 >gi|160885547|ref|ZP_02066550.1| hypothetical protein BACOVA_03547 [Bacteroides ovatus ATCC 8483] gi|299147399|ref|ZP_07040464.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacteroides sp. 3_1_23] gi|156109169|gb|EDO10914.1| hypothetical protein BACOVA_03547 [Bacteroides ovatus ATCC 8483] gi|298514677|gb|EFI38561.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacteroides sp. 3_1_23] Length = 278 Score = 244 bits (624), Expect = 1e-62, Method: Composition-based stats. Identities = 80/260 (30%), Positives = 116/260 (44%), Gaps = 12/260 (4%) Query: 9 SFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLS 68 C + GL + + + D +L + ++ L N I R K+E I I G+ +F ++ Sbjct: 27 LICCDMLGLDALDIYMGKDIILSECKQRELENIIFRLQKNEPIQYIRGFAEFSGRNFKVA 86 Query: 69 SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128 S PRPET LV+ + E + +LD+GTG+G + ++L K+ P D Sbjct: 87 SGVLIPRPETAELVELIVK------ENPNARHLLDIGTGSGCIAISLDKKLPDVDVEAWD 140 Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL---FDVIVSNPPYIESVIVDCLGL 185 IS +AL IA+ N RF LQ D S FDVIVSNPPY+ + + Sbjct: 141 ISEEALAIARKNNEDLEAGVRF--LQRDVLSDDWEKVPSFDVIVSNPPYVTETEKNEMDA 198 Query: 186 EVRDFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 V D++P ++L D L Y IA S L G EI + I E + Sbjct: 199 NVLDWEPGLALFVPDEDPLRFYNRIACLGSELLLPGGKLYFEINQAYGRETAHILEMNQY 258 Query: 245 FLVNAFKDYGGNDRVLLFCR 264 V KD G DR++ R Sbjct: 259 RDVRVIKDIFGKDRIVTANR 278 >gi|116333898|ref|YP_795425.1| methylase of polypeptide chain release factor [Lactobacillus brevis ATCC 367] gi|116099245|gb|ABJ64394.1| Methylase of polypeptide chain release factor [Lactobacillus brevis ATCC 367] Length = 283 Score = 244 bits (623), Expect = 1e-62, Method: Composition-based stats. Identities = 71/257 (27%), Positives = 119/257 (46%), Gaps = 9/257 (3%) Query: 7 SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66 + + +++ L Q + R E +LG+ FY Sbjct: 27 AQYLMLEGNQWRFTELVQHYREALSPTQTQAFQAQLARVCAGEPAQYVLGYAPFYGREFQ 86 Query: 67 LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126 ++ T PRPETE LV+ L ++ ++ +++D+GTG+GA+ + L KE P + Sbjct: 87 VTPATLIPRPETEELVEWVL-----QVVRQPAAKVIDVGTGSGAIAVTLKKERPMWLVTA 141 Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGL 185 DIS A+ +A+ NA ++ + D + V G FDVIVSNPPYI+ + + Sbjct: 142 TDISDAAIAVAQKNAQR--LTAQLMWATGDLLAPVTGQRFDVIVSNPPYIDRTEMPEMDT 199 Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KL 244 V+ ++P +L GL+ Y+ A ++ +L G EIGY+Q V +IF+ Sbjct: 200 SVKRYEPEQALYAADHGLAFYQRFAQVLTTYLVPTGDFFAEIGYHQGAAVKQIFKQALPD 259 Query: 245 FLVNAFKDYGGNDRVLL 261 V D G+DR++ Sbjct: 260 AQVTVKSDINGHDRMIH 276 >gi|258512738|ref|YP_003186172.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257479464|gb|ACV59783.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 313 Score = 244 bits (623), Expect = 1e-62, Method: Composition-based stats. Identities = 80/269 (29%), Positives = 128/269 (47%), Gaps = 10/269 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A R++ + G +++ + D ++ E + +LG +DFY Sbjct: 37 AEREAEQIVAHALGWDRVKLLQSLGDEVPDEIAERAARLAALRVQGEPLAYVLGKQDFYG 96 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + D PRP+TE+LV+ A+ F R++D+GTG+G + +++ P Sbjct: 97 RTFEVGPDCLIPRPDTEVLVEEAIRFLK---RMPSGTRVIDVGTGSGCIAVSIALACPGV 153 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGL-FDVIVSNPPYIESV 178 VD+S AL +A+ NA G + D ++ + G + IVSNPPYI + Sbjct: 154 SVTAVDLSMDALAVARRNAERFGAVVDWAAADGIEWLIERAERGRPWHAIVSNPPYIPTG 213 Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD-GLCSVEIGYNQKVDVVR 237 +D L VRD++PR++LDGG DGL YR +A L + +E+G+NQ +V R Sbjct: 214 EIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEVGHNQADEVAR 273 Query: 238 IFE--SRKLFLVNAFKDYGGNDRVLLFCR 264 +F + F V KD G DRV+ R Sbjct: 274 LFAPWRERGFRVRKVKDLRGIDRVIAVTR 302 >gi|297531577|ref|YP_003672852.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Geobacillus sp. C56-T3] gi|297254829|gb|ADI28275.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Geobacillus sp. C56-T3] Length = 293 Score = 244 bits (623), Expect = 1e-62, Method: Composition-based stats. Identities = 73/265 (27%), Positives = 108/265 (40%), Gaps = 7/265 (2%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSL-KHESIHRILGWRDFYNV 63 R + LC G+ + +D+ + R H I ++G+ FY Sbjct: 24 RAAEWLLCHHLGVDRAGLFARWREPVDEAVYERFAADVRRHAVDHVPIQYLIGYESFYGR 83 Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 ++ PRPETE LV L R + ++D+GTG+GA+ + L E+ Sbjct: 84 PFLVNRHVLIPRPETEELVLGVLKRVPRLFAGRKRIDVVDVGTGSGAIAVTLALENKALS 143 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVIV 180 DIS AL +A+ NA G L D + DV+VSNPPYI Sbjct: 144 VTATDISEAALAVARENARRLGA--NVSFLCGDLLQPIMAMGWTVDVVVSNPPYIPETDA 201 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 L V++++P +L GG DGL YR A + L L + E+G Q V + Sbjct: 202 AMLSPVVKNYEPHTALFGGRDGLDFYRRFARELPLVLGAPALAAFEVGAGQGEAVAALLA 261 Query: 241 SR-KLFLVNAFKDYGGNDRVLLFCR 264 + V D G DR++ R Sbjct: 262 AAFPEAEVEVDFDLNGKDRMVYMTR 286 >gi|293375559|ref|ZP_06621833.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Turicibacter sanguinis PC909] gi|325836756|ref|ZP_08166223.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Turicibacter sp. HGF1] gi|292645776|gb|EFF63812.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Turicibacter sanguinis PC909] gi|325491134|gb|EGC93423.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Turicibacter sp. HGF1] Length = 283 Score = 244 bits (623), Expect = 1e-62, Method: Composition-based stats. Identities = 71/260 (27%), Positives = 124/260 (47%), Gaps = 10/260 (3%) Query: 8 HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSL-KHESIHRILGWRDFYNVRLT 66 L VTG S++++ D + + Q ++ + ++ + I+G+ F+ + Sbjct: 26 KLLLMHVTGKESYEILADMNMEVPQEQVEEFERSVKTYVEQNIPVQHIMGYETFFGHKFI 85 Query: 67 LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126 ++ D PR ETE LV + L+ + + V+++D+GTG+GA+ + L E P + Sbjct: 86 VNDDVLIPRFETEELVANVLS-TYDDVFDGAAVKLVDVGTGSGAIGVTLAVEEPNMEVTV 144 Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL---FDVIVSNPPYIESVIVDCL 183 ++S ALE+AK NA G Q D + FD++VSNPPYI + + + Sbjct: 145 TELSEAALEVAKKNAANLGA--NVTFYQGDMLQPLIERGLKFDILVSNPPYIP--LTEDV 200 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR- 242 V+D +P ++L GG DGL YR I + +N+ + + E YN K + + + Sbjct: 201 DPLVKDNEPHLALFGGEDGLKFYRQILKDAHKVVNEKNIIAFEHAYNHKEAMAELVKQHF 260 Query: 243 KLFLVNAFKDYGGNDRVLLF 262 KD G DR+ + Sbjct: 261 PNAEFETLKDLNGKDRMTII 280 >gi|163746456|ref|ZP_02153814.1| modification methylase, HemK family, putative [Oceanibulbus indolifex HEL-45] gi|161380341|gb|EDQ04752.1| modification methylase, HemK family, putative [Oceanibulbus indolifex HEL-45] Length = 280 Score = 244 bits (623), Expect = 1e-62, Method: Composition-based stats. Identities = 89/233 (38%), Positives = 121/233 (51%), Gaps = 8/233 (3%) Query: 28 SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALA 87 + I + +++G R FY ++S D +PRPETE LVD AL Sbjct: 50 EEIAPDVAERFEQLIALRAVRVPVSQLIGRRAFYGRDFSISRDVLDPRPETETLVDLALG 109 Query: 88 FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147 RILDLGTG+G + + LL E G+GVD+S A A +NAV +GV+ Sbjct: 110 SHFD--------RILDLGTGSGCILVTLLAERAQATGLGVDLSEAACLQASANAVQHGVA 161 Query: 148 ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207 ER + QSDWFS+VEG FD+I+SNPPY+ + + + E+R +P ++L G DGLS YR Sbjct: 162 ERAEIRQSDWFSAVEGRFDLILSNPPYLAAEEMADVSPELRQHEPEMALTDGQDGLSIYR 221 Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260 IA +L +G VEIG+ Q V IF V D G RV+ Sbjct: 222 IIATEAQGYLTPEGRVMVEIGWQQGEAVQDIFTKAGWGRVTLAHDLDGRPRVV 274 >gi|89070965|ref|ZP_01158191.1| modification methylase, HemK family protein [Oceanicola granulosus HTCC2516] gi|89043472|gb|EAR49686.1| modification methylase, HemK family protein [Oceanicola granulosus HTCC2516] Length = 289 Score = 244 bits (623), Expect = 1e-62, Method: Composition-based stats. Identities = 85/275 (30%), Positives = 120/275 (43%), Gaps = 20/275 (7%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 RD+ + ++ + + I R HE + + G R FY Sbjct: 22 DPGRDARRLFAHALKVPPGRLTLILPEPVPADALAIYRQLITRRAAHEPVSHLTGRRMFY 81 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE--- 118 ++ D +PRPETE L+++ALA ++LDLG G+G + L LL E Sbjct: 82 GREFLVTPDVLDPRPETETLIEAALA--------EPFAQVLDLGMGSGCILLTLLAEMEA 133 Query: 119 --SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF-------DVIV 169 P G GV++S A E+A N + ER LQ W++ + F +IV Sbjct: 134 MGHPEVWGAGVELSPAAFEVAWWNRNAFRLEERALLLQGSWYAPLAAEFGADMPGFALIV 193 Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY 229 SNPPY+ L VR+ +PRI+L G DGL+ YR I HL G VEIG Sbjct: 194 SNPPYVTEDEWQALDATVREHEPRIALTDGADGLTAYREIVASAPAHLAPRGRLMVEIGP 253 Query: 230 NQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 Q + V + L V +D G DRV+L R Sbjct: 254 AQGMAVAALMLEAGLSDVRIVQDLDGRDRVVLGRR 288 >gi|156326678|ref|XP_001618669.1| hypothetical protein NEMVEDRAFT_v1g224919 [Nematostella vectensis] gi|156199778|gb|EDO26569.1| predicted protein [Nematostella vectensis] Length = 244 Score = 244 bits (623), Expect = 1e-62, Method: Composition-based stats. Identities = 80/233 (34%), Positives = 116/233 (49%), Gaps = 8/233 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 D+ L G S + P+ LD Q AIVR E + ILG + F++ Sbjct: 19 PRLDAELLLAHALGKSRSYLHTWPERELDAPQLERYQAAIVRRQAGEPVAYILGQQGFWS 78 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +++ T PRP+TELLV++ LA + +LDLGTGTGA+ LAL E P + Sbjct: 79 LELEVAAHTLIPRPDTELLVETVLA-----LLPATSAALLDLGTGTGAIALALASERPAW 133 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181 + GVD +A+ +A+ N +S + +S WFS + G F +IVSNPPYI + Sbjct: 134 RLTGVDRVSEAVALAERNRARLKLS-NANFAESHWFSVLVGHRFQLIVSNPPYIAADDRH 192 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234 +VR F+P +L G DGL R I +L G +E G++Q Sbjct: 193 LAEGDVR-FEPSSALVAGADGLDDIRLIIQQAPGYLEAGGWLLLEHGFDQAAA 244 >gi|24213008|ref|NP_710489.1| protoporphyrinogen oxidase [Leptospira interrogans serovar Lai str. 56601] gi|24193693|gb|AAN47507.1| protoporphyrinogen oxidase [Leptospira interrogans serovar Lai str. 56601] Length = 286 Score = 244 bits (623), Expect = 1e-62, Method: Composition-based stats. Identities = 67/265 (25%), Positives = 122/265 (46%), Gaps = 7/265 (2%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A D+ L + L ++ V+ + +L++ ++ I+ K++ I + FYN Sbjct: 26 ARLDAEILLADLLNLQRVKLYVNFERLLNETEKNAYRERILERSKNKPTAYITSQKAFYN 85 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 ++ + PRPETE LV+ L+ I +++ +LDL TG+G + ++L + Sbjct: 86 SIFFVNENVLIPRPETEELVEKVLSDFKGNIGEQN---VLDLCTGSGCIGISLKLARKDW 142 Query: 123 KGVGVDISCKALEIAKSNA-VTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVI 179 DIS +ALE+A NA G + L+SD F S+ E F++IV+NPPYI Sbjct: 143 NITLSDISKEALEVATKNAIQILGEEKHIQFLESDLFLSIPKESKFNLIVTNPPYIPISD 202 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 + +V D++P ++L + T+ L + G +EI + ++ Sbjct: 203 KAEMMKDVIDYEPHLALF-LENPKDFLSTLIAQAYERLVEGGKLYMEILPSLSETIISDS 261 Query: 240 ESRKLFLVNAFKDYGGNDRVLLFCR 264 ++ KD G +R ++ R Sbjct: 262 IAKGWENGKIEKDLSGKERFVILTR 286 >gi|84503528|ref|ZP_01001579.1| modification methylase, HemK family protein [Oceanicola batsensis HTCC2597] gi|84388018|gb|EAQ01066.1| modification methylase, HemK family protein [Oceanicola batsensis HTCC2597] Length = 279 Score = 244 bits (623), Expect = 1e-62, Method: Composition-based stats. Identities = 98/262 (37%), Positives = 130/262 (49%), Gaps = 8/262 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 RD+ + + + ++ + + I R L HE + RI+G R FY Sbjct: 24 PERDARRLMAHALEVGADRISLMAQDEIGPGSEEAFDGLIARRLLHEPVSRIVGGRWFYG 83 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 +S T +PRPETE LV AL R+LDLGTGTG + ++LL E Sbjct: 84 RWFDVSPATLDPRPETETLVQIALERRFD--------RVLDLGTGTGCIVISLLAERADA 135 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182 +GVG D+S AL A NA T GV++R ++SDW + V+G FD+IVSNPPYI + Sbjct: 136 RGVGSDLSEGALATAAENAATCGVADRLSLVRSDWMAGVDGTFDLIVSNPPYIAPEEMSG 195 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 L +V FDPR +L G+DGL YR IA L G VEIG Q V +F Sbjct: 196 LAPDVTKFDPRQALTDGVDGLGAYRAIAAQAPARLVPGGRLLVEIGPTQAGAVAGLFRDA 255 Query: 243 KLFLVNAFKDYGGNDRVLLFCR 264 L + F D G DRV+ R Sbjct: 256 GLTEIRTFPDLDGRDRVVAALR 277 >gi|170696250|ref|ZP_02887382.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Burkholderia graminis C4D1M] gi|170138810|gb|EDT07006.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Burkholderia graminis C4D1M] Length = 288 Score = 244 bits (623), Expect = 1e-62, Method: Composition-based stats. Identities = 87/261 (33%), Positives = 128/261 (49%), Gaps = 11/261 (4%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 ++ L V G Q+I D LD R + E I +I+G R+F+ + Sbjct: 27 LEARILLTHVLGWRHTQLITRADEALDSECVERYLALQARRVAGEPIAQIVGVREFFGLE 86 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 ++ PRPETELLV++AL +E R+LDLGTGTGA+ +A+ P + Sbjct: 87 FEVTPHVLIPRPETELLVETALT----AMENLPRPRVLDLGTGTGAIAVAIASMRPDAQV 142 Query: 125 VGVDISCKALEIAKSNAVTNGVSER----FDTLQSDWFSSVEG--LFDVIVSNPPYIESV 178 +D S +AL +A NA ++R QSDW+ S++ FDVIVSNPPYI S Sbjct: 143 TALDRSAEALAVAARNAARLLDAKRAGGAVTFAQSDWYGSLDTALRFDVIVSNPPYIASG 202 Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238 ++R ++PR +L DGLS R I G L G+ +E GYNQ V + Sbjct: 203 DPHLEQGDLR-YEPRGALTDEADGLSAIRAIVAGAPARLAARGVLWMEHGYNQAEAVREL 261 Query: 239 FESRKLFLVNAFKDYGGNDRV 259 ++ V + +D G +R+ Sbjct: 262 LTAQGFVDVRSERDLAGIERI 282 >gi|158337450|ref|YP_001518625.1| protoporphyrinogen IX oxidase [Acaryochloris marina MBIC11017] gi|158307691|gb|ABW29308.1| protoporphyrinogen IX oxidase [Acaryochloris marina MBIC11017] Length = 312 Score = 243 bits (622), Expect = 1e-62, Method: Composition-based stats. Identities = 72/271 (26%), Positives = 117/271 (43%), Gaps = 12/271 (4%) Query: 4 LRDSHSFLCRVTGLSSHQVIVDPDSV------LDDRQRFFLTNAIVRSLKHESIHRILGW 57 ++ L ++ L+ + + P + + + L R +++ + + G Sbjct: 43 RQELDWLLLEISNLTPLDLKLTPSAPPIVQMQVSLEELQQLWQ--QRLTENKPVQHLTGT 100 Query: 58 RDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117 + L +S D PRPETELL+D + + + DLGTG+GA+ L L Sbjct: 101 THWRQFHLQVSKDVLIPRPETELLIDLVVDAAQNSARLDHLNLWADLGTGSGAIALGLAT 160 Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPY 174 P VD S +AL +A+ N+ T G+ + WF + EG F IVSNPPY Sbjct: 161 AFPQGTVHTVDCSREALAVAQRNSQTYGLDPQIHFHWGQWFGPLVGLEGQFSGIVSNPPY 220 Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234 I + I+ L EV + +P ++LDGG DGL + I ++L G +E+ Q Sbjct: 221 IPTEILPTLQPEVFEHEPHLALDGGEDGLDAIQEIVAIAPQYLQPGGFLLLEMMCGQDAA 280 Query: 235 VVRIFESRK-LFLVNAFKDYGGNDRVLLFCR 264 V + ++ + D G R R Sbjct: 281 VKTLLINQGQYEQIQIHPDLAGIPRFAQAYR 311 >gi|296876521|ref|ZP_06900572.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Streptococcus parasanguinis ATCC 15912] gi|296432514|gb|EFH18310.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Streptococcus parasanguinis ATCC 15912] Length = 276 Score = 243 bits (622), Expect = 1e-62, Method: Composition-based stats. Identities = 72/260 (27%), Positives = 115/260 (44%), Gaps = 11/260 (4%) Query: 6 DSHSF--LCRVT-GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 ++ S R + ++ ++ + L + + H I+G +F Sbjct: 20 EAESLSFAYRALKNWTFTDFVLALQKEVEVEDQALLDSIFEQLKHHVPAQYIIGSAEFCG 79 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 T+ PRPETE LV L + +R+LD+GTG+GA+ ++L P + Sbjct: 80 HVFTVDERVLIPRPETEELVTLILEEN-----DEKALRVLDIGTGSGAIAISLALAKPTW 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182 + D+S +AL +A+ NA + + SD + G +D+IVSNPPYI V+ Sbjct: 135 QVQASDVSEEALALAQKNAK--QLEAFLEFKSSDVLEQLAGPYDLIVSNPPYISRDDVEE 192 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 +G V +P ++L DG + Y IA L DG +EIGY Q V +F Sbjct: 193 VGANVLASEPHLALFADRDGYAIYEKIAQQAPSVLTPDGKIYLEIGYKQGAKVKELFREA 252 Query: 243 -KLFLVNAFKDYGGNDRVLL 261 V KD G DR+++ Sbjct: 253 FPDKRVRVLKDQFGQDRMVV 272 >gi|85709576|ref|ZP_01040641.1| protein chain release factors methylase subunit [Erythrobacter sp. NAP1] gi|85688286|gb|EAQ28290.1| protein chain release factors methylase subunit [Erythrobacter sp. NAP1] Length = 274 Score = 243 bits (622), Expect = 2e-62, Method: Composition-based stats. Identities = 80/265 (30%), Positives = 126/265 (47%), Gaps = 17/265 (6%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A D+ + G+S +++ + D + + + R HE + I G ++FY Sbjct: 21 ARLDAELLMAHALGVSRSDMLL---RHMSDAEPEGFASLVERRAAHEPVAHITGTQEFYG 77 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 +S PR ++E L+D+ L + + R+LDLGTG+GA+ + L E Sbjct: 78 REFAVSPHVLIPRGDSETLIDTVLESA------PNAKRVLDLGTGSGALLITTLLELEGA 131 Query: 123 KGVGVDISCKALEIAKSNAVTNGV-SERFDTLQSDWFSSVE----GLFDVIVSNPPYIES 177 G+G+D S ALE+A+SNA G+ R L+ DW G FD+IV NPPY+E Sbjct: 132 SGLGIDASEPALELARSNAQALGLIGSRARFLRRDWHEEGWDDDLGTFDLIVCNPPYVEE 191 Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237 L +VRD++P +L G +GL YR I + + L+ +G+ +EIG +Q V + Sbjct: 192 D--AELDADVRDYEPASALFAGPEGLDDYRVIIPQLRKLLSAEGMAVLEIGASQGEAVSK 249 Query: 238 IFESRKLFLVNAFKDYGGNDRVLLF 262 I V KD R + Sbjct: 250 IATEHGF-CVKILKDLANRPRCAVL 273 >gi|29829453|ref|NP_824087.1| methyltransferase [Streptomyces avermitilis MA-4680] gi|29606561|dbj|BAC70622.1| putative modification methyltransferase [Streptomyces avermitilis MA-4680] Length = 293 Score = 243 bits (622), Expect = 2e-62, Method: Composition-based stats. Identities = 78/266 (29%), Positives = 108/266 (40%), Gaps = 14/266 (5%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 D+ V G+ Q+ + D+ D R I R E + I G F Sbjct: 35 PRNDAEELAAFVHGVKRGQLHLVKDADFDAR----YWEMIARREAREPLQHITGLAYFRY 90 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L + F PRPETE +V A+ + I+DL TG+GA+ LAL +E P Sbjct: 91 LELQVGPGVFVPRPETESVVGWAIDAVRAMDVVEPL--IVDLCTGSGAIALALAQEVPRS 148 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW---FSSVEGLFDVIVSNPPYIESVI 179 + V++S AL + N R D Q D F ++G D+++SNPPYI Sbjct: 149 RVHAVELSEDALRWTRKNVE----GSRVDLRQGDALEAFPDLDGQVDLVISNPPYIPLTE 204 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 + + E RD DP ++L G DGL R I R L G+ +E Q V IF Sbjct: 205 WEYVAPEARDHDPELALFSGEDGLDLIRGIERTAHRLLRPGGVVVIEHADTQGGQVPWIF 264 Query: 240 -ESRKLFLVNAFKDYGGNDRVLLFCR 264 E R D R R Sbjct: 265 TEERGWADAADHPDLNNRPRFATARR 290 >gi|210634611|ref|ZP_03298188.1| hypothetical protein COLSTE_02110 [Collinsella stercoris DSM 13279] gi|210158739|gb|EEA89710.1| hypothetical protein COLSTE_02110 [Collinsella stercoris DSM 13279] Length = 357 Score = 243 bits (622), Expect = 2e-62, Method: Composition-based stats. Identities = 82/317 (25%), Positives = 130/317 (41%), Gaps = 55/317 (17%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 +A + L VTG+S ++ + D +D R+ + A+VR K E + I G F Sbjct: 26 RARLSAEWLLSSVTGMSRTELYMSFDKPMDPRELDAMHAAVVRRAKGEPLQYIAGETTFR 85 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFS----------------LPRIEK---------- 95 + + PRPETELLV+ L + LP + Sbjct: 86 MIDVACEEGVLIPRPETELLVEEVLTYIDREVLGGAVASRARIELPWNSEVQAAREAEEK 145 Query: 96 ----------------------RDVVRILDLGTGTGAVCLALLKESPF-FKGVGVDISCK 132 V R+L++G GTG + L++ E V DI + Sbjct: 146 EAAADAAASDSVVEEVEGSSGEDAVARVLEVGCGTGCISLSIASERRDRVAVVATDIEPR 205 Query: 133 ALEIAKSNAVTNGVSER-FDTLQSDWFSSVE-----GLFDVIVSNPPYIESVIVDCLGLE 186 A+++A N G+ + D + S ++ G FDV+VSNPPYI + ++ L E Sbjct: 206 AVDLAARNRDALGIDAKTVDIRLGNLVSPLDRETEWGTFDVLVSNPPYIPTDVMATLPHE 265 Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246 V DF+P ++LDGG DGL +R + L K+GL + E+ + + + Sbjct: 266 VADFEPSLALDGGTDGLDIFRRLVSAAPFMLRKNGLLACELYEGHLDAAADLCRAAGMED 325 Query: 247 VNAFKDYGGNDRVLLFC 263 V D G R++L Sbjct: 326 VRIVDDLTGRPRIVLAR 342 >gi|153808976|ref|ZP_01961644.1| hypothetical protein BACCAC_03277 [Bacteroides caccae ATCC 43185] gi|149128309|gb|EDM19528.1| hypothetical protein BACCAC_03277 [Bacteroides caccae ATCC 43185] Length = 278 Score = 243 bits (622), Expect = 2e-62, Method: Composition-based stats. Identities = 75/260 (28%), Positives = 113/260 (43%), Gaps = 12/260 (4%) Query: 9 SFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLS 68 C + GL + + + D +L + ++ L N I R K+E I I G+ +F + ++ Sbjct: 27 LICCDMLGLDALDIYMGKDIILSECKQRELENIIFRLQKNEPIQYIRGFAEFCGRKFKVA 86 Query: 69 SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128 PRPET LV+ + E +LD+GTG+G + ++L + P + D Sbjct: 87 PGVLIPRPETAELVELIVK------ENPGARHLLDIGTGSGCIAISLDQNLPDAEVEAWD 140 Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG---LFDVIVSNPPYIESVIVDCLGL 185 +S +AL IA N + R + D S G +DVIVSNPPYI + Sbjct: 141 VSEEALAIASENNKE--LDARVMFRRRDVLSDELGATSCYDVIVSNPPYITEAEKQDMEA 198 Query: 186 EVRDFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 V D++P ++L D L YR IA L G EI + I E + Sbjct: 199 NVLDWEPGLALFVPDDDPLRFYRRIARLGCDLLLPGGKLYFEINQAYGRETAHILEMNQY 258 Query: 245 FLVNAFKDYGGNDRVLLFCR 264 V KD G DR++ R Sbjct: 259 RDVRVIKDIFGKDRIVTANR 278 >gi|218528947|ref|YP_002419763.1| modification methylase, HemK family [Methylobacterium chloromethanicum CM4] gi|218521250|gb|ACK81835.1| modification methylase, HemK family [Methylobacterium chloromethanicum CM4] Length = 296 Score = 243 bits (622), Expect = 2e-62, Method: Composition-based stats. Identities = 96/265 (36%), Positives = 142/265 (53%), Gaps = 6/265 (2%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 A D+ L + L+ + + L + A R L E + RILG +F+ Sbjct: 29 NARSDARFLLLHILSLTPLDLTLRGREPLGAAGAEAIRQAAERRLAGEPVARILGAWEFW 88 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 + L +T PRP+TE +V++AL E+ +R++DLGTG+G + +ALL E P Sbjct: 89 GLPFALGPETLVPRPDTESVVETALRLL---PERERPLRLIDLGTGSGCILVALLHERPG 145 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181 G+G+D S AL +A+ NA NGV++R L W ++EG FD+IVSNPPYI + ++ Sbjct: 146 ALGIGLDRSAAALAVARRNAAANGVADRAAFLCGSWLDALEGPFDLIVSNPPYIAAPVIA 205 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR---HLNKDGLCSVEIGYNQKVDVVRI 238 L EVR DP+ +LDGG DGL YR I V+R L+ G +EIGY+Q + R+ Sbjct: 206 TLEPEVRLHDPQAALDGGADGLDAYRAILADVARRPGLLSVQGALVLEIGYDQANALTRL 265 Query: 239 FESRKLFLVNAFKDYGGNDRVLLFC 263 + + +D GNDRV+ Sbjct: 266 AQEAGFEDIAVGRDLAGNDRVVTLR 290 >gi|332291079|ref|YP_004429688.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Krokinobacter diaphorus 4H-3-7-5] gi|332169165|gb|AEE18420.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Krokinobacter diaphorus 4H-3-7-5] Length = 288 Score = 243 bits (621), Expect = 2e-62, Method: Composition-based stats. Identities = 71/258 (27%), Positives = 114/258 (44%), Gaps = 4/258 (1%) Query: 11 LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70 L V ++ +V + + L + R + E I I+G +FY + ++ Sbjct: 31 LEHVLKMNRVEVSLSRKMDISTSALTQLNDVTGRLSRSEPIQYIVGTTEFYGIEFQVNPA 90 Query: 71 TFEPRPETELLVDSAL---AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 T PRPETE LVD + A S + E ++ ++ILD+GTG+G + ++L K + Sbjct: 91 TLIPRPETEELVDWIITDKAESFVKSETQEKLKILDIGTGSGCIAISLAKYMSKAHVEAI 150 Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEV 187 DIS AL A NA N V F +E +D+IVSNPPY+ + + V Sbjct: 151 DISQDALATAYQNAKRNEVDVTFYNQDVLAVEELEHKYDIIVSNPPYVRMLEKKEMRDNV 210 Query: 188 RDFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246 +P +L D L YR I + L+ +G EI +++ + + Sbjct: 211 LSNEPDSALFVSDDDPLIFYRKIGELAFESLSVNGFLYFEINEYLGKEMIDLLKVIGFEN 270 Query: 247 VNAFKDYGGNDRVLLFCR 264 V +D G DR++ R Sbjct: 271 VELREDMFGKDRMIKASR 288 >gi|170017815|ref|YP_001728734.1| methylase of polypeptide chain release factor [Leuconostoc citreum KM20] gi|169804672|gb|ACA83290.1| Methylase of polypeptide chain release factor [Leuconostoc citreum KM20] Length = 332 Score = 243 bits (621), Expect = 2e-62, Method: Composition-based stats. Identities = 78/253 (30%), Positives = 118/253 (46%), Gaps = 5/253 (1%) Query: 10 FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69 L ++ + + + + I ++ + ILG FY + Sbjct: 78 LLSGALNINYAYLRANITRTMPAKLAAVWPKWIAMLIQQQPPQYILGHAPFYGREFIVDE 137 Query: 70 DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129 PRPETE LV LA + + V +LD+GTG+GA+ L+ E+P +G DI Sbjct: 138 RVLIPRPETEQLVAWILADA--SGTTGESVSVLDIGTGSGAIIETLMLENPRVRGFAADI 195 Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVR 188 S AL +A NA + + ++SD FS + FD+IVSNPPYI S D + V Sbjct: 196 SSDALTVAALNAQQLNIK-QLRFVESDVFSGLADLRFDLIVSNPPYIASSDEDEMDASVL 254 Query: 189 DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLV 247 ++P +L GL+ Y+ IA+G++ HL G EIGY Q VV I + V Sbjct: 255 TYEPHDALFADNQGLAIYQKIAEGLAAHLTPQGRAYFEIGYKQGQQVVDIMQKALPKATV 314 Query: 248 NAFKDYGGNDRVL 260 +D+ G DR++ Sbjct: 315 TLKQDFAGLDRMV 327 >gi|225848847|ref|YP_002729011.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Sulfurihydrogenibium azorense Az-Fu1] gi|225644266|gb|ACN99316.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Sulfurihydrogenibium azorense Az-Fu1] Length = 282 Score = 243 bits (621), Expect = 2e-62, Method: Composition-based stats. Identities = 75/268 (27%), Positives = 122/268 (45%), Gaps = 12/268 (4%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 ++ L + + H++ DPD + D Q N ++ K + ++ ++F+ Sbjct: 21 NPQLEALIILQEILKIPKHKIFTDPDLEIKDYQEAI--NVALQRSKKVPLGYLIKKKEFF 78 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 + + PRPETE+LV+ L ++E L++G G+G + ++LL Sbjct: 79 GLEFYIEEGVLIPRPETEVLVEKVLH----QLENLKNPLGLEVGVGSGCISVSLLYNKKD 134 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSER-----FDTLQSDWFSSVEGLFDVIVSNPPYIE 176 K +DIS KAL+I K NA + +R FD ++ D D +VSNPPYI Sbjct: 135 LKMYALDISEKALKITKINAEKYDLLDRLTLIKFDVMKDDVKDLNLDRLDFVVSNPPYIS 194 Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236 + L EV+ +P+ +L G G Y I + +L + G + EIG NQ V Sbjct: 195 EDEYESLPEEVKK-EPKEALISGKVGTEFYEKIVEKFKNYLKEYGFFAFEIGINQAEKVK 253 Query: 237 RIFESRKLFLVNAFKDYGGNDRVLLFCR 264 I E + +KD G DRVL+ + Sbjct: 254 SILERNGFKNIKIYKDLAGIDRVLIASK 281 >gi|319936942|ref|ZP_08011352.1| modification methylase [Coprobacillus sp. 29_1] gi|319807878|gb|EFW04457.1| modification methylase [Coprobacillus sp. 29_1] Length = 284 Score = 243 bits (621), Expect = 2e-62, Method: Composition-based stats. Identities = 76/263 (28%), Positives = 116/263 (44%), Gaps = 14/263 (5%) Query: 7 SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66 + + HQ+ + D ++D I R + E I I G F++ Sbjct: 24 AKVLFYHLANKEPHQLYLMMDEEVEDELYQAFQAGIKRYMDGEPIQYIKGKETFFSRDFI 83 Query: 67 LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126 ++ D PR ETE LV++ L E + + + D+GTG+GA+ ++L E V Sbjct: 84 VNEDVLIPRYETEELVENILYKIDDYFEDYESIDLCDVGTGSGAIAISLALEESKLNVVA 143 Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIVDCL 183 DIS +ALE+A+ NA G + Q D + E D+ VSNPPYI + Sbjct: 144 TDISKEALEVARLNAQELGA--NIEFYQGDMLEPLIDREMKVDIFVSNPPYIPVE--QDI 199 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV----DVVRIF 239 V+D +P ++L GG DGL YR I V + L + E+G++Q+ V F Sbjct: 200 ESVVKDNEPHVALFGGNDGLYFYRKIFSKVQSVIKDRALLAFEMGFDQRELMCQAVEHYF 259 Query: 240 ESRKLFLVNAFKDYGGNDRVLLF 262 + KD G DR+L Sbjct: 260 PNIPY---EIIKDINGKDRMLFI 279 >gi|37521324|ref|NP_924701.1| protoporphyrinogen oxidase [Gloeobacter violaceus PCC 7421] gi|35212321|dbj|BAC89696.1| protoporphyrinogen oxidase [Gloeobacter violaceus PCC 7421] Length = 286 Score = 243 bits (621), Expect = 2e-62, Method: Composition-based stats. Identities = 82/273 (30%), Positives = 134/273 (49%), Gaps = 18/273 (6%) Query: 2 QALRDSHS----------FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKH-ES 50 QAL ++ + VTGL +V + L + R L R ++ Sbjct: 11 QALAEARVHDIDAAEIDYLIEAVTGLDRLRVRLGGPQAL-EAHREKLAALWRRRIEEAMP 69 Query: 51 IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110 + +LG + +++L ++ PRPE+E LVD A+ F R++DLGTG+GA Sbjct: 70 LQYLLGTAHWRDLQLQVNPAVLIPRPESEALVDVAVDFCRSCA----GARVVDLGTGSGA 125 Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIV 169 + +A+ + P VD S AL +A +N G+SE+ L+ +WF + FD ++ Sbjct: 126 IAVAVARALPGATVWAVDASEAALVVAGANIERYGLSEQVHLLRGNWFVPLPTQPFDAVL 185 Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY 229 SNPPYI S + L EVR +P +LDGG DGL R I +RHL G+ ++E+ Sbjct: 186 SNPPYIPSAEIAALMPEVRLHEPLSALDGGSDGLDAVRQIIADAARHLRPGGILALEVMA 245 Query: 230 NQKVDVVRIF-ESRKLFLVNAFKDYGGNDRVLL 261 Q VV++ + + +D+ G +R+++ Sbjct: 246 GQGPTVVQLLARDSRYGCIRTVRDWAGIERIVV 278 >gi|198273954|ref|ZP_03206486.1| hypothetical protein BACPLE_00090 [Bacteroides plebeius DSM 17135] gi|198273032|gb|EDY97301.1| hypothetical protein BACPLE_00090 [Bacteroides plebeius DSM 17135] Length = 280 Score = 243 bits (621), Expect = 2e-62, Method: Composition-based stats. Identities = 70/261 (26%), Positives = 113/261 (43%), Gaps = 9/261 (3%) Query: 7 SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66 + + LS+ ++ D ++ L + + R + E + IL F Sbjct: 25 AKWISSDILHLSTLELYTGKDMNFSTKEWAELEDILRRLKQREPLQYILQEASFCGRSFH 84 Query: 67 LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126 + PRPETE LV+ ++ + VRILD+GTG+G + ++L + P + Sbjct: 85 VEQGVLIPRPETEELVEWIVSD----FREAGQVRILDIGTGSGCIPVSLAQLLPEAQVSS 140 Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS--VEGLFDVIVSNPPYIESVIVDCLG 184 D+S +AL IA +N G ++ +D E DV+VSNPPYI + Sbjct: 141 CDVSAEALRIAATNVKRYG--DKVTLFCADILKEELPECQVDVLVSNPPYITESERTDME 198 Query: 185 LEVRDFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 V D++P ++L D L YR IA L++ G EI + +R+ E Sbjct: 199 ANVLDWEPELALFVPDSDPLRFYRRIARKGLDWLSEGGALYFEINRAYGAETMRMLEELG 258 Query: 244 LFLVNAFKDYGGNDRVLLFCR 264 + KD GNDR++ R Sbjct: 259 YRQIELRKDLSGNDRMIKAIR 279 >gi|298493041|ref|YP_003723218.1| protein-(glutamine-N5) methyltransferase ['Nostoc azollae' 0708] gi|298234959|gb|ADI66095.1| protein-(glutamine-N5) methyltransferase, release factor-specific ['Nostoc azollae' 0708] Length = 299 Score = 243 bits (621), Expect = 2e-62, Method: Composition-based stats. Identities = 78/263 (29%), Positives = 119/263 (45%), Gaps = 11/263 (4%) Query: 9 SFLCRVTGLSSHQVIVDPDSVLDDRQ----RFFLTNAIVRSLK-HESIHRILGWRDFYNV 63 L + GL + ++ D Q L R L + I G + Sbjct: 35 WLLQEIAGLDRLSLRLESFKAWDKVQTQISLAELDQLWQRRLHDRLPVQYIAGVTPWRMF 94 Query: 64 RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123 +L +SS PRPETE+L+D A+A ++ DLGTG+GA+ L L + Sbjct: 95 KLAVSSAVLIPRPETEMLIDLAVAAAVSG--GVQSGHWADLGTGSGAIALGLAEVLINAT 152 Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVIV 180 VD S +AL +AK+NA G E+ QS W+ +E G F +VSNPPYI + V Sbjct: 153 IHAVDFSPEALAVAKTNAENVGFGEQVKFYQSSWWEPLESLKGQFSGMVSNPPYIPTDTV 212 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 L EV +P ++LDGG DGL R + + +L G+ +E+ Q V + E Sbjct: 213 LTLQPEVLKHEPHLALDGGADGLDCIRHLIEVSPAYLRPGGVWLIEMMAGQADIVRELLE 272 Query: 241 SRK-LFLVNAFKDYGGNDRVLLF 262 ++ ++ +D G +R + Sbjct: 273 NKGHYCNISIHRDLAGIERFAVA 295 >gi|322804408|emb|CBZ01958.1| methylase of polypeptide chain release factors [Clostridium botulinum H04402 065] Length = 283 Score = 243 bits (620), Expect = 2e-62, Method: Composition-based stats. Identities = 71/262 (27%), Positives = 119/262 (45%), Gaps = 7/262 (2%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L +V ++ +PD + + ++ I I ILG +F + Sbjct: 25 DAQLLLGKVLKKDRLFILTNPDYHIKEEEKEKYFQLIDLRKNKMPIKYILGTTEFMGLDF 84 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 + PRP+TE+LV++ L I+ ++ +I D+ G+G + + + + + Sbjct: 85 NIKKGVLIPRPDTEILVETVLE----EIKNKNYKQICDVCCGSGIIGITIGYTLNNTEII 140 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIVDC 182 DI K N + + + +R L+SD + + FD+IVSNPPYI +++ Sbjct: 141 CYDIEDIPYNTTKENILKHNLQDRVKALKSDLLTEAIKEKRRFDLIVSNPPYIREDVIET 200 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 L +V+ ++P +L GG DGL Y I LN G + EIGY+QK+ V I Sbjct: 201 LMDDVKKYEPFEALCGGKDGLFFYEGIIKQSLEVLNDGGTIAFEIGYDQKIQVSHILNEY 260 Query: 243 KLFLVNAFKDYGGNDRVLLFCR 264 V KD G DRV+ + Sbjct: 261 GFKDVLCIKDLAGKDRVIKARK 282 >gi|322411679|gb|EFY02587.1| putative methyltransferase [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 279 Score = 243 bits (620), Expect = 2e-62, Method: Composition-based stats. Identities = 77/246 (31%), Positives = 119/246 (48%), Gaps = 8/246 (3%) Query: 17 LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRP 76 SS ++ + + L + +H S + G F +++L++ PRP Sbjct: 34 WSSLDFLLHQNQEVSSDDCLILEKIFMDLSQHLSPQYLTGRAYFRDLQLSVDQRVLIPRP 93 Query: 77 ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136 ETE LVD LA + + LD+GTG+GA+ ++L KE P ++ DIS AL + Sbjct: 94 ETEELVDLILAEN-----PDTPLSALDIGTGSGAIAISLKKERPAWQLTASDISSDALSL 148 Query: 137 AKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL 196 A+ NA + + SD FS + G FD+IVSNPPYI D +GL V +P ++L Sbjct: 149 AQDNASHYQLD--ITFIVSDVFSQLSGTFDMIVSNPPYIAYEDKDEVGLNVYQSEPHLAL 206 Query: 197 DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE-SRKLFLVNAFKDYGG 255 DG + YR I + S +L++ G EIGY Q + + V KD G Sbjct: 207 FAAEDGYAIYRRIIEEASNYLSEKGKLYFEIGYKQGEGIKALVNIHFPQKRVRVLKDVFG 266 Query: 256 NDRVLL 261 +R+++ Sbjct: 267 KERMVV 272 >gi|288817940|ref|YP_003432287.1| methyltransferase, HemK family [Hydrogenobacter thermophilus TK-6] gi|288787339|dbj|BAI69086.1| methyltransferase, HemK family [Hydrogenobacter thermophilus TK-6] gi|308751537|gb|ADO45020.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Hydrogenobacter thermophilus TK-6] Length = 271 Score = 243 bits (620), Expect = 2e-62, Method: Composition-based stats. Identities = 79/263 (30%), Positives = 121/263 (46%), Gaps = 7/263 (2%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 +LRD L + + +V + D + ++ + + +LG DFY Sbjct: 14 SLRDRELLLAHLLKVKVGEVYLLLDRHVSKEMEEEYMRSLSLLEEGYPLQYLLGEWDFYG 73 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + PRPETELLV+ L P E ++G GTG + + LL E P Sbjct: 74 RTFRVEEGVLIPRPETELLVEKVLEKVPPNKEAVGF----EIGVGTGCISITLLLERPKL 129 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181 D+ KA+ +A++NA + V +R D F V+G+ FD ++SNPPYI Sbjct: 130 IMYADDLQEKAVHLAETNARLHKVEDRLFLKVGDMFEPVKGMVFDFVISNPPYIPQKEWA 189 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 L V+ + ++SL GG G Y A V + L +DG ++EIG++Q + IF Sbjct: 190 GLPKGVKL-EGKVSLIGGEKGYEFYERFAKEVGKFLKEDGFFALEIGHDQGKILEDIFSQ 248 Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264 F +KDY G DRV+L + Sbjct: 249 EGFF-AQVYKDYAGQDRVILGWK 270 >gi|103488190|ref|YP_617751.1| HemK family modification methylase [Sphingopyxis alaskensis RB2256] gi|98978267|gb|ABF54418.1| modification methylase, HemK family [Sphingopyxis alaskensis RB2256] Length = 274 Score = 243 bits (620), Expect = 2e-62, Method: Composition-based stats. Identities = 82/261 (31%), Positives = 128/261 (49%), Gaps = 10/261 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 D+ + G+ +++DP + R + HE + ILG+RDF+ Sbjct: 22 PRLDAELLMADALGIERQALLLDPARY---DVPADFDALVERRMAHEPVAYILGYRDFWT 78 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 +RL + PRP++E L+ +A+ ILDLGTG G + A + E Sbjct: 79 IRLAVGPGALIPRPDSETLIAAAV----QHFGAAGPRHILDLGTGPGTLLFAAMSEWADA 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182 +G+GVD S AL A++NA+ G+++R +Q DW + V G FD+I+ NPPYI Sbjct: 135 RGLGVDASDVALGYARANAIALGLADRVGLMQGDWAAGVTGRFDLILCNPPYIAESE--A 192 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 L +V D +P +L G DGL+ YR I + L G+ +EIG+ Q++ V + ++ Sbjct: 193 LMPDVADHEPAGALFAGADGLADYRRIIPDLPHLLAPGGIAILEIGHTQRISVSEMADAA 252 Query: 243 KLFLVNAFKDYGGNDRVLLFC 263 V +D G DR LL Sbjct: 253 GFA-VACRQDLAGRDRALLLT 272 >gi|310644399|ref|YP_003949158.1| protein-(glutamine-n5) methyltransferase, release factor-specific [Paenibacillus polymyxa SC2] gi|309249350|gb|ADO58917.1| Protein-(Glutamine-N5) methyltransferase, release factor-specific [Paenibacillus polymyxa SC2] Length = 299 Score = 243 bits (620), Expect = 2e-62, Method: Composition-based stats. Identities = 78/264 (29%), Positives = 114/264 (43%), Gaps = 5/264 (1%) Query: 1 MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60 ++ ++ L V GL + + I R E I+G ++F Sbjct: 36 LEPQHNARLLLEHVLGLEGTRFYAALGDPFPSSVKDTWERIIARKAAGEPAQYIIGQQEF 95 Query: 61 YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120 Y +S PRPETELLV++ L R+ LD+GTG+GA+ + L E P Sbjct: 96 YGRPFAVSPSVLIPRPETELLVEAILQHG-DRLWPSGAPHALDIGTGSGAIAVTLAAERP 154 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVI 179 + DIS ALEIA + + D + G D++VSNPPYI + Sbjct: 155 RWHVAAGDISAAALEIAAQ--NAAANGAVIEFREGDLLAPFAGTAVDILVSNPPYIPAAD 212 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 + L EVRD +PR++LDGG DGL YR + + + L E+G Q DV + Sbjct: 213 IAGLQPEVRDHEPRMALDGGPDGLGPYRAMLEQLGLLQAPPRLIGFELGMGQARDVAGLL 272 Query: 240 ESRK-LFLVNAFKDYGGNDRVLLF 262 E + D G +R +L Sbjct: 273 EQAGHWKNILIIPDLAGIERHVLG 296 >gi|218132000|ref|ZP_03460804.1| hypothetical protein BACEGG_03623 [Bacteroides eggerthii DSM 20697] gi|217985876|gb|EEC52216.1| hypothetical protein BACEGG_03623 [Bacteroides eggerthii DSM 20697] Length = 282 Score = 243 bits (620), Expect = 3e-62, Method: Composition-based stats. Identities = 77/266 (28%), Positives = 108/266 (40%), Gaps = 10/266 (3%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 +A S C + G ++ + D +L ++ L + R L E I I G F Sbjct: 24 EAANLSRIVCCEMLGQTTIDYYLGKDIILSSKEMQKLNGILARLLNFEPIQYIQGTARFL 83 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 ++ PRPETE LV+ L E RILD+GTG+G + ++L K P Sbjct: 84 ERSYHVAPGVLIPRPETEELVEVMLR------EISSDARILDIGTGSGCIAISLSKAFPN 137 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVI 179 K D+S AL IA+ N S F Q +G +DVIVSNPPYI Sbjct: 138 AKVTAWDVSEDALCIARRNNDDLQASVCF-VKQDVLAWGGDGGQCYDVIVSNPPYITESE 196 Query: 180 VDCLGLEVRDFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238 + V D++P +L D L YR I + L G EI + Sbjct: 197 KQEMERNVLDWEPFSALFVPNNDPLLFYRRIGELGRMMLVDGGRLYFEINRAYGEATAMM 256 Query: 239 FESRKLFLVNAFKDYGGNDRVLLFCR 264 + + KD GNDR ++ R Sbjct: 257 LCGQGYTGIRILKDISGNDRFVIAER 282 >gi|148378144|ref|YP_001252685.1| protein methyltransferase [Clostridium botulinum A str. ATCC 3502] gi|153933674|ref|YP_001382545.1| HemK family modification methylase [Clostridium botulinum A str. ATCC 19397] gi|153935975|ref|YP_001386097.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Clostridium botulinum A str. Hall] gi|148287628|emb|CAL81693.1| protein methyltransferase [Clostridium botulinum A str. ATCC 3502] gi|152929718|gb|ABS35218.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Clostridium botulinum A str. ATCC 19397] gi|152931889|gb|ABS37388.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Clostridium botulinum A str. Hall] Length = 283 Score = 243 bits (620), Expect = 3e-62, Method: Composition-based stats. Identities = 71/262 (27%), Positives = 119/262 (45%), Gaps = 7/262 (2%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L +V ++ +PD + + ++ I I ILG +F + Sbjct: 25 DAQLLLGKVLKKDRLFILTNPDYHIKEEEKEKYFQLIDLRKNKMPIKYILGTTEFMGLNF 84 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 + PRP+TE+LV++ L I+ ++ +I D+ G+G + + + + + Sbjct: 85 NIKKGVLIPRPDTEILVETVLE----EIKNKNYKQICDVCCGSGIIGITIGYTLNNTEII 140 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIVDC 182 DI K N + + + +R L+SD + + FD+IVSNPPYI +++ Sbjct: 141 CYDIEDIPYNTTKENILKHNLQDRVKALKSDLLTEAIKEKRRFDLIVSNPPYIREDVIET 200 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 L +V+ ++P +L GG DGL Y I LN G + EIGY+QK+ V I Sbjct: 201 LMDDVKKYEPFEALCGGKDGLFFYEGIIKQSLEVLNDGGTIAFEIGYDQKIQVSHILNEY 260 Query: 243 KLFLVNAFKDYGGNDRVLLFCR 264 V KD G DRV+ + Sbjct: 261 GFKDVLCIKDLAGKDRVIKARK 282 >gi|227514468|ref|ZP_03944517.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Lactobacillus fermentum ATCC 14931] gi|260663283|ref|ZP_05864174.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Lactobacillus fermentum 28-3-CHN] gi|227087154|gb|EEI22466.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Lactobacillus fermentum ATCC 14931] gi|260552135|gb|EEX25187.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Lactobacillus fermentum 28-3-CHN] Length = 283 Score = 242 bits (619), Expect = 3e-62, Method: Composition-based stats. Identities = 64/256 (25%), Positives = 119/256 (46%), Gaps = 8/256 (3%) Query: 7 SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66 + L + S ++ + + + AI R E ++G F+ + Sbjct: 28 AQFILEMLHDWSMTDLLANNRQPMPVEEATRYQRAITRVASSEPAQYVVGKAPFFGRKFV 87 Query: 67 LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126 ++ D P ETE LV+ L + +++LDLGTG+G + + L E P ++ Sbjct: 88 VNRDVLIPETETEELVEWVLD----SMPADKELKVLDLGTGSGVIGITLALERPKWQVTL 143 Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGL 185 DIS AL+IA +N +G + ++SD F+ + + FD+IV+NPPY+ +D + Sbjct: 144 SDISAAALKIALTNQRLHGT--NLNQVESDLFARLGDQRFDLIVTNPPYVALSEIDEMDP 201 Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES-RKL 244 EV +++P ++L +GL+ YR + HL G+ E G+ Q+ + ++ + Sbjct: 202 EVLEYEPPLALFASENGLAFYRRLFAAAGEHLTPRGVLFGETGHRQEERIQQLLKELAPS 261 Query: 245 FLVNAFKDYGGNDRVL 260 + D G R++ Sbjct: 262 AKIETRHDIAGRMRMI 277 >gi|297182759|gb|ADI18913.1| methylase of polypeptide chain release factors [uncultured SAR11 cluster bacterium HF0010_09O16] Length = 279 Score = 242 bits (619), Expect = 3e-62, Method: Composition-based stats. Identities = 77/264 (29%), Positives = 145/264 (54%), Gaps = 5/264 (1%) Query: 1 MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60 + A DS + + + +I++ + R + N I + I +I+ +DF Sbjct: 20 ISAKLDSEILMSQAIRKNKKFIILNLHKEIKKRDLEYFDNLIQERAGRKPIAQIVKKKDF 79 Query: 61 YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120 + ++++ PRP+TE L++ +L ++ ++ ++ILD+G G+G + +++LKE Sbjct: 80 WKYEFIVNNNVLIPRPDTETLIEQ----TLKLVKNKNRLQILDIGIGSGCILMSILKEKK 135 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180 F G G+DIS K+L+I+K N ++ R +S+ + G +D+IVSNPPYI+ I+ Sbjct: 136 NFIGTGIDISSKSLQISKVNGQKLRINNRLRLFKSNIDNFNTGKYDLIVSNPPYIKKSIL 195 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 CL ++ F+P+ +LDGG+DGLS R + + S + + G +EIG++QK V +I Sbjct: 196 KCLEKDI-GFEPKQALDGGLDGLSEIRKVINKSSELIKRSGHLIIEIGFDQKNKVKKILR 254 Query: 241 SRKLFLVNAFKDYGGNDRVLLFCR 264 + ++ KD +DR ++ + Sbjct: 255 DKGFYIKKTVKDLSNHDRCIVGIK 278 >gi|92113654|ref|YP_573582.1| HemK family modification methylase [Chromohalobacter salexigens DSM 3043] gi|91796744|gb|ABE58883.1| [protein release factor]-glutamine N5-methyltransferase [Chromohalobacter salexigens DSM 3043] Length = 286 Score = 242 bits (619), Expect = 3e-62, Method: Composition-based stats. Identities = 79/262 (30%), Positives = 113/262 (43%), Gaps = 8/262 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 D+ + ++ + D + I + + G R+F+ Sbjct: 22 PRLDAEVLMMHAADVTRAWLYTWGDREIVPPAWARFDALIAARSLGHPVAHLTGEREFWG 81 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L + T PRP+TE LV++ LA R LDLGTG+GA+ LAL E P + Sbjct: 82 LVLRVDDTTLIPRPDTECLVEALLARM-----PHATGRALDLGTGSGAIALALASERPAW 136 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVD 181 VGVD A+ +A +NA +S L SDWFS++ FDVI +NPPYI Sbjct: 137 HVVGVDKVPGAVRLATANAERLALS-NATFLVSDWFSALGNETFDVIAANPPYIAEDDPH 195 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 +VR F+PR +L GL+ +A HL G ++E G Q V I S Sbjct: 196 LAQGDVR-FEPRSALVAEDAGLADLCHLALTARAHLAGGGWLAMEHGMTQAARVREILTS 254 Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263 V + D G +RV L Sbjct: 255 AGYRDVASVADLGARERVTLGR 276 >gi|294101725|ref|YP_003553583.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Aminobacterium colombiense DSM 12261] gi|293616705|gb|ADE56859.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Aminobacterium colombiense DSM 12261] Length = 286 Score = 242 bits (619), Expect = 3e-62, Method: Composition-based stats. Identities = 75/267 (28%), Positives = 133/267 (49%), Gaps = 11/267 (4%) Query: 2 QALRDSHSFLCRVTGLSSHQ-VIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60 +A ++ FLC + +S + +++ + L + + L + R + E + I+G+ F Sbjct: 26 RAESETEWFLCSLKEISRSRFLLIASEVYLTEEEVISLNQMVQRRISGEPLQYIIGYESF 85 Query: 61 YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120 + + PRPETEL+V+ AL + + LD GTG+G + +L E P Sbjct: 86 WGRDFLVGPGCLIPRPETELVVEEALRYFVK-------GSFLDWGTGSGCIAATILAERP 138 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIES 177 +GV +++S +A+E A N + R S S + D+I+SNPPYI + Sbjct: 139 LSRGVAIEVSPQAIEWAWKNLRRYNLLHRCLLWHSREMSDIPVPSQSLDLIISNPPYIPT 198 Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237 + L EV ++P ++LDGG DGL +Y+ + L G+ VE+G + + +V+ Sbjct: 199 AAIGRLMKEVAGYEPYVALDGGEDGLLYYKELLHVAPIWLKPGGMLVVELGDSTQGEVLA 258 Query: 238 IFESRKLFLVNAFKDYGGNDRVLLFCR 264 + + L L+ KD+ G R+ ++CR Sbjct: 259 NYNALGLRLMKLAKDFQGIYRIAVWCR 285 >gi|297182636|gb|ADI18794.1| methylase of polypeptide chain release factors [uncultured SAR11 cluster bacterium HF4000_37C10] Length = 279 Score = 242 bits (619), Expect = 3e-62, Method: Composition-based stats. Identities = 78/260 (30%), Positives = 136/260 (52%), Gaps = 5/260 (1%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 D L + G++ I + + +AI R + E + I+G ++F++ Sbjct: 24 LDVQVILSDIMGVTRDFFIANSHINVSINTIKKFNHAIKRRINREPVAYIIGKKEFWSQD 83 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 ++ T PRPETELL+ + F K + ILD+GTG+G + L++LKE F +G Sbjct: 84 FAVNHATLVPRPETELLIYKVVDFF-----KNKRINILDIGTGSGCILLSILKELDFSRG 138 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184 VG+DIS KA++ A+ N+ + + D G +D+IVSNPPYI S + L Sbjct: 139 VGIDISTKAIKTAQINSKNLNLFHQSKFKVFDISKFNVGKYDLIVSNPPYIPSKDIKNLS 198 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 ++ +++P ++L+GG+DGL R + + L ++GL ++EIG+NQ + V + + Sbjct: 199 KDIINYEPLVALNGGLDGLDLIRKVIYKSNSLLKRNGLLAIEIGFNQYLKVSSLLKQYGF 258 Query: 245 FLVNAFKDYGGNDRVLLFCR 264 ++ DY N R ++ + Sbjct: 259 REMSRQCDYNHNVRCIISTK 278 >gi|160888033|ref|ZP_02069036.1| hypothetical protein BACUNI_00441 [Bacteroides uniformis ATCC 8492] gi|156862532|gb|EDO55963.1| hypothetical protein BACUNI_00441 [Bacteroides uniformis ATCC 8492] Length = 247 Score = 242 bits (619), Expect = 3e-62, Method: Composition-based stats. Identities = 75/254 (29%), Positives = 105/254 (41%), Gaps = 12/254 (4%) Query: 15 TGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEP 74 G S + D +L + L + + R E I + G F ++ P Sbjct: 2 LGQSHIDYYLGKDMILSPKDEKELESILFRLCNFEPIQYVQGTARFLGRTFRVAPGVLIP 61 Query: 75 RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134 RPETE LV+ L E RILD+GTG+G + + L KE P + DIS +AL Sbjct: 62 RPETEELVERMLE------EVAPASRILDIGTGSGCIAVTLSKELPEAEVTAWDISGEAL 115 Query: 135 EIAKSNAVTNGVSERFDTLQSDWF---SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFD 191 IA N S +F +Q D + + FDVIVSNPPY+ + V +++ Sbjct: 116 AIAGDNNRLLQTSVQF--VQRDVLTYQPAEDEYFDVIVSNPPYVTETEKKDMEPNVLNWE 173 Query: 192 PRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAF 250 P +L D L YR I + L G EI V + + V Sbjct: 174 PSGALFVPDSDPLRFYRRIGELGRSMLTVGGRLYFEINRAFGEAVASMLRKQGYTNVRIR 233 Query: 251 KDYGGNDRVLLFCR 264 KD GNDR ++ R Sbjct: 234 KDISGNDRYVIAER 247 >gi|170756524|ref|YP_001779765.1| HemK family modification methylase [Clostridium botulinum B1 str. Okra] gi|169121736|gb|ACA45572.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Clostridium botulinum B1 str. Okra] Length = 283 Score = 242 bits (619), Expect = 3e-62, Method: Composition-based stats. Identities = 71/262 (27%), Positives = 119/262 (45%), Gaps = 7/262 (2%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L +V ++ +PD + + ++ I I ILG +F + Sbjct: 25 DAQLLLGKVLKKDRLFILTNPDYHIKEEEKEKYFQLIDLRKDKMPIKYILGTTEFMGLDF 84 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 + PRP+TE+LV++ L I+ ++ +I D+ G+G + + + + + Sbjct: 85 NIKKGVLIPRPDTEILVETVLE----EIKNKNYKQICDVCCGSGIIGITIGYTLNNTEII 140 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIVDC 182 DI K N + + + +R L+SD + + FD+IVSNPPYI +++ Sbjct: 141 CYDIEDIPYNTTKENILKHNLEDRVKVLKSDLLTEAIKEKRRFDLIVSNPPYIREDVIET 200 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 L +V+ ++P +L GG DGL Y I LN G + EIGY+QK+ V I Sbjct: 201 LMDDVKKYEPFEALCGGKDGLFFYEGIIKQSLEVLNDGGTIAFEIGYDQKIQVSHILNEY 260 Query: 243 KLFLVNAFKDYGGNDRVLLFCR 264 V KD G DRV+ + Sbjct: 261 GFKDVLCIKDLAGKDRVIKARK 282 >gi|317487379|ref|ZP_07946169.1| protein-(glutamine-N5) methyltransferase [Bilophila wadsworthia 3_1_6] gi|316921375|gb|EFV42671.1| protein-(glutamine-N5) methyltransferase [Bilophila wadsworthia 3_1_6] Length = 315 Score = 242 bits (619), Expect = 3e-62, Method: Composition-based stats. Identities = 85/300 (28%), Positives = 130/300 (43%), Gaps = 43/300 (14%) Query: 2 QALRD-----SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILG 56 +A D + L V G+S ++ P++ L Q +T + R E +LG Sbjct: 19 EAAVDSPRLSAELILQHVCGISRVELATRPETFLTSDQLSRMTGLLRRRADGEPAAYLLG 78 Query: 57 WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116 R+FY ++ T PRPETE L+++AL DLGTG+G + + L Sbjct: 79 QREFYGRDFRVTPATLIPRPETEHLIEAALKG------CDGPASFADLGTGSGCIAVTLC 132 Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPY 174 E P ++G+ VD+S +AL +A NAV + V +R +++D+ + D++VSNPPY Sbjct: 133 AERPDWRGLMVDLSGRALAVACQNAVRHDVRQRLQPVRADFTRPLLRPESLDLLVSNPPY 192 Query: 175 IESVIVDCLGLEVRDFDPRISLD------------------------------GGIDGLS 204 + + L EVRDF+P +L +GL Sbjct: 193 VGKTEYEGLSAEVRDFEPVTALVPNFVDSDKIPSHDHHHDHGGSHSHVPSTPPDKPEGLE 252 Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 H +A L GL +E GY Q + + ES K V KD G+DRV + Sbjct: 253 HLIAVAQEAFVALKPGGLLLMEHGYAQGAAIKVLLESHKWENVLILKDLSGHDRVASARK 312 >gi|172058703|ref|YP_001815163.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Exiguobacterium sibiricum 255-15] gi|171991224|gb|ACB62146.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Exiguobacterium sibiricum 255-15] Length = 282 Score = 242 bits (619), Expect = 4e-62, Method: Composition-based stats. Identities = 77/262 (29%), Positives = 122/262 (46%), Gaps = 12/262 (4%) Query: 7 SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66 + L V + +++ L+ Q + ++ L + ++G++ FY Sbjct: 24 AEWLLMHVLQIDRTGLLIRLSDELEPEQDLLFSEYLLAHLNGVPVQHLIGYQPFYGRNFR 83 Query: 67 LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126 +S PRPETE L++ + E I+D+GTG+GA+CL L E Sbjct: 84 VSPAVLIPRPETEELIEFVTGRL--QGETFQPGEIVDIGTGSGAICLTLALELGQP-VTT 140 Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGL 185 VDIS +A+ +AK N T G L+ D + + + V+VSNPPYIE + L Sbjct: 141 VDISPEAIAVAKENQQTLG--GEVTFLEGDLLAPLADHSVRVLVSNPPYIEEDEL--LSD 196 Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS-VEIGYNQKVDVVRIFESRKL 244 V D +P ++L GG DGL YR + + +R L D EIG+NQ +V ++ ++ Sbjct: 197 VVFDHEPHLALFGGKDGLVFYRRLLEDSARVLRDDFRLIAFEIGHNQGQEV-QMMLKKRY 255 Query: 245 FLVNA--FKDYGGNDRVLLFCR 264 V KD G DR++ R Sbjct: 256 PTVETGILKDINGKDRIVYAER 277 >gi|309812205|ref|ZP_07705963.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Dermacoccus sp. Ellin185] gi|308433892|gb|EFP57766.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Dermacoccus sp. Ellin185] Length = 483 Score = 242 bits (619), Expect = 4e-62, Method: Composition-based stats. Identities = 79/270 (29%), Positives = 118/270 (43%), Gaps = 18/270 (6%) Query: 3 ALRDSHSFLCRVTGLS-----SHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGW 57 A RD+ L V G +V+ L+D I + + + G Sbjct: 23 ADRDAALLLAHVLGCELGEVRRREVLGH---ELNDEDMARFEALIDERARRVPLQHLTGR 79 Query: 58 RDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117 F ++ L + F PRPETE+LVD+AL + RI+DL TG+GA+ LA+ Sbjct: 80 APFRSLELRVGPGVFVPRPETEMLVDAALEAA------PHGGRIVDLCTGSGAIALAIKA 133 Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS-DWFSSVEGLFDVIVSNPPYIE 176 E P + V++S +A A N G++ + +EG FDV+VSNPPY+ Sbjct: 134 ERPDLEVYAVELSEEAAAWAALNCKQIGLTVNLSVEDARQALPELEGSFDVVVSNPPYVP 193 Query: 177 SVIVDCLGLEVRDFDPRISLDGG-IDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235 + +V + EV + DP I+L GG DGL IA+ + L GL +E Q + Sbjct: 194 TGMVP-IDPEVAEHDPEIALYGGSEDGLRFPLEIAERAAHLLKPGGLLVMEHADAQGESL 252 Query: 236 -VRIFESRKLFLVNAFKDYGGNDRVLLFCR 264 + + R D G R+ L R Sbjct: 253 PEALLDRRGFEWARDEADLAGKPRMTLARR 282 >gi|299782949|gb|ADJ40947.1| Protein-(Glutamine-N5) methyltransferase, release factor-specific [Lactobacillus fermentum CECT 5716] Length = 283 Score = 242 bits (618), Expect = 4e-62, Method: Composition-based stats. Identities = 65/256 (25%), Positives = 119/256 (46%), Gaps = 8/256 (3%) Query: 7 SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66 + L + S ++ + + + AI R E ++G F+ + Sbjct: 28 AQFILEMLHDWSMTDLLANNRQPMPVEEATRYQRAITRVASSEPAQYVVGKAPFFGRKFV 87 Query: 67 LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126 ++ D P ETE LV+ L + +++LDLGTG+G + + L E P ++ Sbjct: 88 VNRDVLIPETETEELVEWVLD----SMPADKELKVLDLGTGSGVIGITLALERPKWQVTL 143 Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGL 185 DIS AL+IA +N +G + ++SD F+ + + FD+IV+NPPY+ +D + Sbjct: 144 SDISAAALKIALTNQRLHGT--NLNQVESDLFARLGDQRFDLIVTNPPYVALSEIDEMDP 201 Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES-RKL 244 EV +++P ++L +GL+ YR + HL G+ E G+ Q+ + R+ + Sbjct: 202 EVLEYEPPLALFASENGLAFYRRLFAAAGEHLTPRGVLFGETGHRQEERIQRLLKELAPS 261 Query: 245 FLVNAFKDYGGNDRVL 260 + D G R++ Sbjct: 262 AKIETRHDIAGRMRMI 277 >gi|94987068|ref|YP_595001.1| protoporphyrinogen oxidase HemK [Lawsonia intracellularis PHE/MN1-00] gi|3599925|gb|AAC36501.1| orfx; similar to Escherichia coli possible protoporphyrinogen oxidase (hemK) [Lawsonia intracellularis] gi|94731317|emb|CAJ54680.1| similar to Escherichia coli possible protoporphyrinogen oxidase (hemK) [Lawsonia intracellularis PHE/MN1-00] Length = 293 Score = 242 bits (618), Expect = 4e-62, Method: Composition-based stats. Identities = 71/268 (26%), Positives = 121/268 (45%), Gaps = 14/268 (5%) Query: 7 SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66 + L V ++ Q+I+ P + L + ++R L E I + G ++F++ Sbjct: 27 AELILSHVLNITRLQIIMTPFEPIPTNSYSTLNDIMLRRLHGEPIAYLTGKKEFFSREFK 86 Query: 67 LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126 ++ T PRPETELL++ L P + + DLGTG+G + + L E + G+ Sbjct: 87 VTQATLIPRPETELLIEFVLNHINPTQQ----IYFADLGTGSGCIAITLAAERKNWLGIA 142 Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS--VEGLFDVIVSNPPYIESVIVDCLG 184 DIS +AL+IAK N++ N + LQSD+ + D+ +SNPPYI + L Sbjct: 143 TDISSEALKIAKLNSLKNNTHSQLQFLQSDFTQPLCLPSSLDLYISNPPYISENELTSLP 202 Query: 185 LEVRDFDPRISLDGGIDG--------LSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236 EV F+P+I+L L Y+ I L G+ +E G Q ++ Sbjct: 203 HEVISFEPKIALTPHKCIHLDEINTVLHCYKKIITQAEISLKPGGIIILEHGATQAEAIL 262 Query: 237 RIFESRKLFLVNAFKDYGGNDRVLLFCR 264 + ++ V + D +R + + Sbjct: 263 LLLKNNIWTNVISHTDLTNKNRFITAYK 290 >gi|298372803|ref|ZP_06982793.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacteroidetes oral taxon 274 str. F0058] gi|298275707|gb|EFI17258.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacteroidetes oral taxon 274 str. F0058] Length = 283 Score = 242 bits (618), Expect = 4e-62, Method: Composition-based stats. Identities = 74/253 (29%), Positives = 118/253 (46%), Gaps = 7/253 (2%) Query: 9 SFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLS 68 L ++ GL++ + ++ L D Q + +A+ R ++E I I+G+ DFY + L Sbjct: 29 LLLDKICGLNTTKRLISDKIYLSDEQNGRIDDALERLKRYEPIQYIIGYTDFYGLTLRTD 88 Query: 69 SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128 PRPETE LVD L E ++D+ TG+G + + L K K +D Sbjct: 89 RRALIPRPETEELVDWILQ------ECSTAKNVIDICTGSGCIAVCLAKYLKEAKVSALD 142 Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVR 188 IS +A+ +A+ NA+ + F S+ FD+IV+NPPY+ + V Sbjct: 143 ISSEAIGLARENALNQRLDIVFYQKDIMATDSLWQKFDLIVANPPYVTLNEKIDMMPNVL 202 Query: 189 DFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLV 247 D++P ++L D L YRTIA ++L G+ EI + V + S + Sbjct: 203 DYEPSLALFVDDEDPLIFYRTIARFARKNLVDGGMLFFEINRKFGKETVDLLASMGFVDI 262 Query: 248 NAFKDYGGNDRVL 260 KD GNDR + Sbjct: 263 VPKKDISGNDRFI 275 >gi|266618886|ref|ZP_06111824.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Clostridium botulinum Bf] gi|263528592|gb|EEZ28359.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Clostridium botulinum Bf] Length = 283 Score = 242 bits (618), Expect = 5e-62, Method: Composition-based stats. Identities = 72/262 (27%), Positives = 119/262 (45%), Gaps = 7/262 (2%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L ++ ++ +PD + D ++ I I ILG +F + Sbjct: 25 DTQLLLGKILKKDRLFILTNPDYHIKDEEKEKYFQLIELRKNKMPIKYILGTTEFMGLDF 84 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 + PRP+TE+LV++ L I+ ++ +I D+ G+G + + + + + Sbjct: 85 NIKKGVLIPRPDTEILVETVLE----EIKNKNYKQICDVCCGSGIIGITIGYTLNNTEII 140 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIVDC 182 DI K N + + + +R L+SD + + FD+IVSNPPYI I++ Sbjct: 141 CYDIEDIPYNTTKENILKHNLQDRIKVLKSDLLTEAIKEKRKFDLIVSNPPYIRENIIET 200 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 L +V+ ++P +L GG DGL Y I LN G + EIGY+QK+ V I Sbjct: 201 LMDDVKKYEPFEALCGGKDGLFFYEGIIKQSLEVLNDGGTIAFEIGYDQKIQVSHILNEY 260 Query: 243 KLFLVNAFKDYGGNDRVLLFCR 264 V KD G DRV+ + Sbjct: 261 GFKDVLCIKDLAGKDRVIKARK 282 >gi|294631401|ref|ZP_06709961.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptomyces sp. e14] gi|292834734|gb|EFF93083.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptomyces sp. e14] Length = 279 Score = 242 bits (618), Expect = 5e-62, Method: Composition-based stats. Identities = 77/266 (28%), Positives = 108/266 (40%), Gaps = 14/266 (5%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 D+ V G+ Q+ D+ D R I R + E + I G F Sbjct: 21 PRNDAEELAAFVHGVKRGQLHTVKDADFDAR----YWEVIARREQREPLQHITGRAYFRY 76 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L + F PRPETE +V A+ I+DL TG+GA+ LAL +E P Sbjct: 77 LELQVGPGVFVPRPETESVVGWAIDAVRAMDVVEPC--IVDLCTGSGAIALALAQEVPRS 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW---FSSVEGLFDVIVSNPPYIESVI 179 + V++S AL + N R D Q D F ++G D+++SNPPYI Sbjct: 135 RVHAVELSEDALRWTRKNVE----GSRVDLRQGDALTAFPDLDGQVDLVISNPPYIPLTE 190 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 + + E RD+DP ++L G DGL R I R L G+ +E Q V IF Sbjct: 191 WEYVAPEARDYDPELALFSGEDGLDLIRGIERTAHRLLRPGGVVVIEHADTQGGQVPWIF 250 Query: 240 -ESRKLFLVNAFKDYGGNDRVLLFCR 264 E R D R + Sbjct: 251 TEERGWADAADHPDLNNRPRFATARK 276 >gi|317474401|ref|ZP_07933675.1| protein-(glutamine-N5) methyltransferase [Bacteroides eggerthii 1_2_48FAA] gi|316909082|gb|EFV30762.1| protein-(glutamine-N5) methyltransferase [Bacteroides eggerthii 1_2_48FAA] Length = 278 Score = 242 bits (618), Expect = 5e-62, Method: Composition-based stats. Identities = 78/267 (29%), Positives = 108/267 (40%), Gaps = 12/267 (4%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 +A S C + G ++ + D +L ++ L + R L E I I G F Sbjct: 20 EAANLSRIVCCEMLGQTTIDYYLGKDIILSSKEMQKLNGILARLLNFEPIQYIQGTARFL 79 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 ++ PRPETE LV+ L E RILD+GTG+G + ++L K P Sbjct: 80 ERSYHVAPGVLIPRPETEELVEVMLR------EIPSDARILDIGTGSGCIAISLSKAFPN 133 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESV 178 K D+S AL IA+ N S F D L W +DVIVSNPPYI Sbjct: 134 AKVTAWDVSEDALCIARRNNDDLQASVCFVKQDVLA--WRGDGGQCYDVIVSNPPYITES 191 Query: 179 IVDCLGLEVRDFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237 + V D++P +L D L YR I + L G EI Sbjct: 192 EKQEMERNVLDWEPFSALFVPNNDPLLFYRRIGELGRMMLVDGGRLYFEINRAYGEATAM 251 Query: 238 IFESRKLFLVNAFKDYGGNDRVLLFCR 264 + + + KD GNDR ++ R Sbjct: 252 MLCGQGYTGIRILKDISGNDRFVIAER 278 >gi|325299194|ref|YP_004259111.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacteroides salanitronis DSM 18170] gi|324318747|gb|ADY36638.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Bacteroides salanitronis DSM 18170] Length = 280 Score = 241 bits (617), Expect = 5e-62, Method: Composition-based stats. Identities = 79/266 (29%), Positives = 118/266 (44%), Gaps = 9/266 (3%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 +A + S L V S+ + D +++ L + + R + E I G F Sbjct: 20 EAKALAKSILTEVFRFSALDLYDGKDREFSEKEHAALEDILSRLKRFEPFQYITGEASFC 79 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 + ++ PRPET LVD ++ + + V I+D+GTG+G + +AL + P Sbjct: 80 GLPFHVAPGVLIPRPETAELVDWIVSD----FQGKAEVSIVDIGTGSGCIAVALARFLPG 135 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVI 179 + DIS AL IA+ NA N V R D Q D FS + E + VSNPPYI Sbjct: 136 ARVSAWDISDAALGIARRNAERNRV--RVDFRQVDVFSHIPAEAHAHIFVSNPPYIRERE 193 Query: 180 VDCLGLEVRDFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238 + V D++P ++L D L +YR IA HL G+ VEI + V + Sbjct: 194 KADMERNVLDWEPELALFVPDGDPLRYYRRIAGLGLVHLAPSGVLYVEINQAYGAETVEL 253 Query: 239 FESRKLFLVNAFKDYGGNDRVLLFCR 264 + KD GNDR++ R Sbjct: 254 LAGIGYRDIVLRKDMSGNDRMIKAVR 279 >gi|303256164|ref|ZP_07342180.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Burkholderiales bacterium 1_1_47] gi|302860893|gb|EFL83968.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Burkholderiales bacterium 1_1_47] Length = 267 Score = 241 bits (617), Expect = 5e-62, Method: Composition-based stats. Identities = 71/261 (27%), Positives = 109/261 (41%), Gaps = 13/261 (4%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D L V G+ ++ D VL + L + + + + +LG ++F+ Sbjct: 17 DKSFMLEHVCGMDKAAQLIHDDRVLSSDEERKLNDIAKKRSEGVPLPYLLGTQEFFARPF 76 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 ++ PR +TE LV+ + + DLGTG+G + + E P Sbjct: 77 LVNPSVLIPRSDTECLVEWLIEHL------PKNALVCDLGTGSGCIAATVALERPDLTVW 130 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCL 183 D+S AL +A++N G +Q W FD ++SNPPYIE Sbjct: 131 ASDLSESALAVAQANCKALGAD--VKLVQGSWLDPYPAELSFDAVISNPPYIERDDKHL- 187 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243 + ++PR +L DGL YRTI + R K L +VE G+NQ V IFE Sbjct: 188 --DALRYEPRSALTDESDGLIAYRTILPQIKRKAPKVQLIAVEHGWNQGEAVRSIFEENG 245 Query: 244 LFLVNAFKDYGGNDRVLLFCR 264 F+DYG N R + + Sbjct: 246 FKGSATFRDYGNNPRFTTWIK 266 >gi|301629495|ref|XP_002943875.1| PREDICTED: protein methyltransferase hemK homolog [Xenopus (Silurana) tropicalis] Length = 269 Score = 241 bits (617), Expect = 5e-62, Method: Composition-based stats. Identities = 76/255 (29%), Positives = 110/255 (43%), Gaps = 12/255 (4%) Query: 9 SFLCRVTGLS---SHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 L G ++ D L D R E + + G + FY + L Sbjct: 1 MLLLHSLGRDPHERAWLLAHDDDALPDDALAVYQTLCQRRAAGEPVAYLTGRKAFYGLPL 60 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 + + +PRP+TE LVD AL P + RI DLGTG+GA+ LAL + + + Sbjct: 61 AVDARVLDPRPDTETLVDWALELLAPHV----APRIADLGTGSGAIALALQSQRADAQVL 116 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185 VD S AL +A++NA+ G+ RF ++ W V G FD IV+NPPYI + Sbjct: 117 AVDASAGALAVARANAMRLGLPVRF--VRCHWLDGVAGPFDAIVANPPYIRADDPHL--- 171 Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245 +P +L G DGL RTI+ L G +E G++Q V + + Sbjct: 172 AALRHEPLSALVSGADGLDDIRTISAQAPMRLAPGGWLLLEHGWDQADAVQALLRAAGFA 231 Query: 246 LVNAFKDYGGNDRVL 260 V + D G R Sbjct: 232 AVASRHDLAGIARCT 246 >gi|325928211|ref|ZP_08189419.1| (protein release factor)-glutamine N5-methyltransferase [Xanthomonas perforans 91-118] gi|325929424|ref|ZP_08190552.1| (protein release factor)-glutamine N5-methyltransferase [Xanthomonas perforans 91-118] gi|325540199|gb|EGD11813.1| (protein release factor)-glutamine N5-methyltransferase [Xanthomonas perforans 91-118] gi|325541427|gb|EGD12961.1| (protein release factor)-glutamine N5-methyltransferase [Xanthomonas perforans 91-118] Length = 286 Score = 241 bits (617), Expect = 5e-62, Method: Composition-based stats. Identities = 77/259 (29%), Positives = 119/259 (45%), Gaps = 7/259 (2%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ + L G + + + + R E + + G R F+ + L Sbjct: 25 DAEALLLHALGRDRAWLFMHGRDAVPLSVAQAFNALVQRREAGEPVAYLTGSRGFWTLDL 84 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 +S T PR +TE+LV+ AL R++ R+ DLGTG+GA+ LA+ E P + + Sbjct: 85 AVSPATLIPRADTEVLVELALE----RLDTVPGRRVADLGTGSGAIALAIASERPQAQVI 140 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLG 184 D S AL +A+ NA ++G+ D Q WF+ + G FD+I SNPPYI + Sbjct: 141 ATDASAAALAMARRNADSHGLR-NVDCRQGSWFAPLAGEAFDLIASNPPYIAAHDPHLKQ 199 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 ++R ++P +L G DGL R I HL G +E G++Q V + +R Sbjct: 200 GDLR-YEPASALASGSDGLDDIRLIVADAPAHLVPGGWLLLEHGWDQGAAVAELLAARGF 258 Query: 245 FLVNAFKDYGGNDRVLLFC 263 V +D DRV L Sbjct: 259 AAVATHQDLERRDRVTLGR 277 >gi|237793456|ref|YP_002861008.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Clostridium botulinum Ba4 str. 657] gi|229261092|gb|ACQ52125.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Clostridium botulinum Ba4 str. 657] Length = 283 Score = 241 bits (617), Expect = 6e-62, Method: Composition-based stats. Identities = 72/262 (27%), Positives = 118/262 (45%), Gaps = 7/262 (2%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L ++ ++ +PD + D ++ I I ILG +F + Sbjct: 25 DTQLLLGKILKKDRLFILTNPDYHIKDEEKEKYFQLIELRKNKMPIKYILGTTEFMGLDF 84 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 + PRP+TE+LV++ L I+ ++ +I D+ G+G + + + + + Sbjct: 85 NIKKGVLIPRPDTEILVETVLE----EIKNKNYKQICDVCCGSGIIGITIGYTLNNTEII 140 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIVDC 182 DI K N + + + +R L+SD + + FD+IVSNPPYI I+ Sbjct: 141 CYDIEDIPYNTTKENILKHNLQDRIKVLKSDLLTEAIKEKRKFDLIVSNPPYIRENIIKT 200 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 L +V+ ++P +L GG DGL Y I LN G + EIGY+QK+ V I Sbjct: 201 LMDDVKKYEPFEALCGGKDGLFFYEGIIKQSLEVLNDGGTIAFEIGYDQKIQVSHILNEY 260 Query: 243 KLFLVNAFKDYGGNDRVLLFCR 264 V KD G DRV+ + Sbjct: 261 GFKDVLCIKDLAGKDRVIKARK 282 >gi|27375330|ref|NP_766859.1| protoporphyrinogen oxidase [Bradyrhizobium japonicum USDA 110] gi|27348466|dbj|BAC45484.1| protoporphyrinogen oxidase [Bradyrhizobium japonicum USDA 110] Length = 297 Score = 241 bits (617), Expect = 6e-62, Method: Composition-based stats. Identities = 92/264 (34%), Positives = 137/264 (51%), Gaps = 2/264 (0%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 +A D+ L GL +I +L + + + R + E + RILG R+F+ Sbjct: 32 EAELDARILLGAALGLDLTGLIAQAARLLTEAEASRIAQHAQRRIAGEPVARILGTREFW 91 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 + LS T PRP+TE +V+ AL + + RI D+GTG+GA+ LALL + P Sbjct: 92 GLPFRLSDATLVPRPDTETVVERALELFREQ-KATQQPRIADIGTGSGAILLALLHDIPG 150 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181 GVG D+S ALE A+ NAVT G+++R + + +++ G FD+IVSNPPYI S + Sbjct: 151 AFGVGTDLSLNALETARGNAVTLGLADRSAFVACSYLAALRGPFDLIVSNPPYIPSAEIP 210 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 L LEVR+ DP ++LDGG DG YR + + L G VE G Q ++ + + Sbjct: 211 KLSLEVREHDPHLALDGGNDGYDAYRALIPQAAERLAPGGALIVEAGQGQARNIETLLTA 270 Query: 242 RKLFLVNAFK-DYGGNDRVLLFCR 264 L + K D G R + + Sbjct: 271 AALVVDRPPKADLAGIPRAVSARK 294 >gi|295836497|ref|ZP_06823430.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptomyces sp. SPB74] gi|197699009|gb|EDY45942.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Streptomyces sp. SPB74] Length = 281 Score = 241 bits (617), Expect = 6e-62, Method: Composition-based stats. Identities = 75/266 (28%), Positives = 108/266 (40%), Gaps = 14/266 (5%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 D+ V + ++ PD+ D R AI R E + I G F Sbjct: 23 PRNDAEELAAYVHDVKRGELHTVPDADFDAR----YWEAIARREAREPLQHITGRAYFRY 78 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L + F PRPETE +V A+ + ++DL TG+GA+ LAL +E P Sbjct: 79 LELQVGPGVFVPRPETESVVGWAIDAVRAMDVVEPL--VVDLCTGSGAIALALAQEVPRS 136 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVI 179 V++S AL + N R Q D F+++ +G D+++SNPPYI Sbjct: 137 TVHAVELSEDALVWTRRNVE----GSRVHLHQGDAFAALPELDGQVDLVISNPPYIPLTE 192 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 + + E RD DP ++L G DGL R I R L G+ VE Q V +F Sbjct: 193 WEYVAPEARDHDPEMALFSGEDGLDTIRRIERTAHRLLRPGGVVVVEHADTQGGQVPWLF 252 Query: 240 -ESRKLFLVNAFKDYGGNDRVLLFCR 264 E R D R + Sbjct: 253 TEERGWADAADHPDLNNRPRFATARK 278 >gi|74318512|ref|YP_316252.1| modification methylase HemK [Thiobacillus denitrificans ATCC 25259] gi|74058007|gb|AAZ98447.1| modification methylase HemK [Thiobacillus denitrificans ATCC 25259] Length = 287 Score = 241 bits (617), Expect = 6e-62, Method: Composition-based stats. Identities = 85/259 (32%), Positives = 121/259 (46%), Gaps = 8/259 (3%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 +A ++ ++ +I V Q + R L E I I+G R+FY Sbjct: 29 EARLEARVLAAHAWQVTPAWLIAHDTDVATAPQTAAFDALLARRLGGEPIAYIVGAREFY 88 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 R +S PRPETELLV+ ALA RI + +LDLGTG+G + + L E Sbjct: 89 GRRFEVSPAVLIPRPETELLVELALA----RIPPDETTTVLDLGTGSGCIAITLALERSR 144 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIV 180 + V+ S AL +A+ NA T G S + DWFS + G +D+IV+NPPYI Sbjct: 145 ARVTAVERSPAALALARRNAQTLGAS--VEFSAGDWFSDLTGRSYDLIVANPPYIADADP 202 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 ++R +P +L G DGL R + DG HL + G+ +E GY+Q V + Sbjct: 203 HLARGDLR-HEPVAALASGADGLDELRRLIDGARDHLRRPGMLLLEHGYDQADAVHALLR 261 Query: 241 SRKLFLVNAFKDYGGNDRV 259 S + D GN RV Sbjct: 262 SGGFARPRCWHDLAGNPRV 280 >gi|15834913|ref|NP_296672.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Chlamydia muridarum Nigg] gi|270285083|ref|ZP_06194477.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Chlamydia muridarum Nigg] gi|270289106|ref|ZP_06195408.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Chlamydia muridarum Weiss] gi|301336479|ref|ZP_07224681.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Chlamydia muridarum MopnTet14] gi|8163189|gb|AAF73543.1| modification methylase, HemK family [Chlamydia muridarum Nigg] Length = 290 Score = 241 bits (617), Expect = 6e-62, Method: Composition-based stats. Identities = 74/260 (28%), Positives = 112/260 (43%), Gaps = 8/260 (3%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 R++ + + +SS + D L +R + + I G F Sbjct: 20 PQREAEDIMMDLLEVSSRGAL--HDIKLSSGERVSYWERVQKRGNRCPTAYIHGKVHFLG 77 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + L +S + PR ETE+ V+ + + EK+ D+ G+G + L++ K P Sbjct: 78 IELQVSPEVLIPRQETEIFVEKIIGYLQTHKEKK---IFYDVCCGSGCIGLSVKKHCPHV 134 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182 V DI +AL +AKSNA N + D L D F D V NPPY+ Sbjct: 135 HVVLSDICSQALAVAKSNAKRNDLI--VDFLCGDLFEPFRIPADAFVCNPPYLSYKEFFK 192 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 + EVR +P +L GG+ GL Y IA+ + + L G+ +EIG NQ V +IF + Sbjct: 193 VDPEVRCHEPWKALVGGVSGLEFYHRIAEHIHKILVPGGVGWLEIGSNQGESVKKIFRDK 252 Query: 243 KLFLVNAFKDYGGNDRVLLF 262 + FKDY DR Sbjct: 253 GISGC-VFKDYAQLDRFFFL 271 >gi|330813116|ref|YP_004357355.1| methylase of polypeptide chain release factors [Candidatus Pelagibacter sp. IMCC9063] gi|327486211|gb|AEA80616.1| methylase of polypeptide chain release factors [Candidatus Pelagibacter sp. IMCC9063] Length = 284 Score = 241 bits (617), Expect = 6e-62, Method: Composition-based stats. Identities = 79/263 (30%), Positives = 134/263 (50%), Gaps = 4/263 (1%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A DS L V + + +L+ Q ++ I R E + IL +DF+N Sbjct: 23 AKIDSEIILASVLKTDRINLSTQHNLILNKSQELLMSQLIERRKNKEPVAYILNKKDFWN 82 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + PRPETE+L++ L +K V+++LD+G G+G + ++ L+E Sbjct: 83 ETYFVDQRALIPRPETEILIEMVLKKIK---DKSKVLQLLDIGCGSGCLLISCLRELKKS 139 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVD 181 G+G+DIS AL ++K N +++R + + F + FDVI+SNPPY+ S D Sbjct: 140 IGIGLDISSDALAVSKINVKNYKLNKRVELHKESIFHFLTLKKFDVILSNPPYLSSAEYD 199 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 L ++V++F+P+ +L GG DG SHY+ I S L K+GL ++E+G Q + I Sbjct: 200 NLEIDVKNFEPKTALKGGHDGTSHYKKIITFASMSLKKNGLLALELGDQQFFKIKEILAE 259 Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264 +++ ++ G R +L + Sbjct: 260 NSFRVLDKYRLINGEIRCILASK 282 >gi|313205777|ref|YP_004044954.1| protein-(glutamine-n5) methyltransferase, release factor-specific [Riemerella anatipestifer DSM 15868] gi|312445093|gb|ADQ81448.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Riemerella anatipestifer DSM 15868] Length = 281 Score = 241 bits (616), Expect = 6e-62, Method: Composition-based stats. Identities = 74/258 (28%), Positives = 121/258 (46%), Gaps = 5/258 (1%) Query: 8 HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67 F GL + ++ L +Q T AI + + +ILG DF+ ++ + Sbjct: 28 EIFGEHYLGLDKIGLRQSENTELPAQQITQYTKAINQLKSGKPYQQILGEADFFGMKFCV 87 Query: 68 SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127 + PRPETE L+D A+ K ++ +ILD+GTG+G + + L K P + + Sbjct: 88 NQHVLIPRPETEELLDYAIKTISKEFSKTEI-KILDIGTGSGVIPIVLKKHFPNARVASI 146 Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEV 187 D S +AL IAK NA + +F L ++ +DVI+SNPPYI V + V Sbjct: 147 DFSKEALTIAKKNAERHHTEIKF-ILDDYLNYTLPTHYDVIISNPPYIGIEEVSEISDTV 205 Query: 188 RDFDPRISLDGG-IDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246 ++F+P ++L D L YR IA +LN G +EI + + +++ Sbjct: 206 KNFEPHLALFSPCSDPLVFYRKIATDAKHYLNNGGFLFLEINQKLGAETLALYKD--FSD 263 Query: 247 VNAFKDYGGNDRVLLFCR 264 KD NDR+++ + Sbjct: 264 AQLIKDLSNNDRMIIAKK 281 >gi|153937927|ref|YP_001389501.1| HemK family modification methylase [Clostridium botulinum F str. Langeland] gi|152933823|gb|ABS39321.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Clostridium botulinum F str. Langeland] gi|295317602|gb|ADF97979.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Clostridium botulinum F str. 230613] Length = 283 Score = 241 bits (616), Expect = 6e-62, Method: Composition-based stats. Identities = 70/262 (26%), Positives = 119/262 (45%), Gaps = 7/262 (2%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ L ++ ++ +PD + + ++ I I ILG +F + Sbjct: 25 DAQLLLGKILKKDRLFILTNPDYHIKEEEKEKYFQLIDLRKNKMPIKYILGTTEFMGLDF 84 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 + PRP+TE+LV++ L I+ ++ +I D+ G+G + + + + + Sbjct: 85 NIKKGVLIPRPDTEILVETVLE----EIKNKNYKQICDVCCGSGIIGITIGYTLNNTEII 140 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIVDC 182 DI K N + + + +R L+SD + + FD+IVSNPPYI +++ Sbjct: 141 CYDIEDIPYNTTKENILKHNLQDRVKALKSDLLTEAIKEKRRFDLIVSNPPYIREDVIET 200 Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242 L +V+ ++P +L GG DGL Y I LN G + EIGY+QK+ V I Sbjct: 201 LMDDVKKYEPFEALCGGKDGLFFYEGIIKQSLEVLNDGGTIAFEIGYDQKIQVSHILNEY 260 Query: 243 KLFLVNAFKDYGGNDRVLLFCR 264 V KD G DRV+ + Sbjct: 261 GFKDVLCIKDLAGKDRVIKARK 282 >gi|78046500|ref|YP_362675.1| protein methyltransferase HemK [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78034930|emb|CAJ22575.1| protein methyltransferase HemK [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 286 Score = 241 bits (616), Expect = 7e-62, Method: Composition-based stats. Identities = 77/259 (29%), Positives = 119/259 (45%), Gaps = 7/259 (2%) Query: 6 DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65 D+ + L G + + + + R E + + G R F+ + L Sbjct: 25 DAEALLLHALGRDRAWLFMHGRDAVPLSVAQAFDALVQRREAGEPVAYLTGSRGFWTLDL 84 Query: 66 TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125 +S T PR +TE+LV+ AL R++ R+ DLGTG+GA+ LA+ E P + + Sbjct: 85 AVSPATLIPRADTEVLVELALE----RLDTVPGRRVADLGTGSGAIALAIASERPQAQVI 140 Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLG 184 D S AL +A+ NA ++G+ D Q WF+ + G FD+I SNPPYI + Sbjct: 141 ATDASAAALAMARRNADSHGLR-NVDCRQGSWFAPLAGEAFDLIASNPPYIAAHDPHLKQ 199 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 ++R ++P +L G DGL R I HL G +E G++Q V + +R Sbjct: 200 GDLR-YEPASALASGSDGLDDIRLIVADAPAHLVPGGWLLLEHGWDQGAAVAELLAARGF 258 Query: 245 FLVNAFKDYGGNDRVLLFC 263 V +D DRV L Sbjct: 259 AAVATHQDLERRDRVTLGR 277 >gi|46581320|ref|YP_012128.1| hemK protein [Desulfovibrio vulgaris str. Hildenborough] gi|46450742|gb|AAS97388.1| hemK protein [Desulfovibrio vulgaris str. Hildenborough] gi|311234982|gb|ADP87836.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Desulfovibrio vulgaris RCH1] Length = 295 Score = 241 bits (616), Expect = 7e-62, Method: Composition-based stats. Identities = 77/262 (29%), Positives = 123/262 (46%), Gaps = 9/262 (3%) Query: 7 SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66 + LC L +++ PD ++++ + + R E + I+G ++F+ Sbjct: 34 AEIILCHALSLRRIDIMLTPDRIVEEADCILFSELVARRATGEPLAYIVGEKEFFGRDFA 93 Query: 67 LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126 ++ T PRPETE L+++AL R +D GTG+G + + L E G+ Sbjct: 94 VNPSTLIPRPETEHLIETALESLRS-----GPARFVDAGTGSGCIAVTLCAERADLSGLA 148 Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVDCLG 184 +D+S AL A NA +GV++R ++ D+ +S+ G D+ SNPPYI L Sbjct: 149 LDMSAPALATASHNARRHGVAQRLAFVRGDFTTSLLRSGSLDLYASNPPYISEAEYTGLS 208 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK- 243 EVRDF+PR +L G GL H I +R L G+ +E G Q D+ +F Sbjct: 209 REVRDFEPRSALVPGDTGLEHAAAIIAEATRVLRPHGILLMEFGCMQGADMASLFTPYST 268 Query: 244 -LFLVNAFKDYGGNDRVLLFCR 264 +V +D G DR + R Sbjct: 269 LWEMVEVRRDLAGLDRFIFARR 290 >gi|167041274|gb|ABZ06030.1| putative CheR methyltransferase, SAM binding domain protein [uncultured marine microorganism HF4000_005D21] gi|167045779|gb|ABZ10425.1| putative methyltransferase small domain protein [uncultured marine bacterium HF4000_APKG3108] Length = 279 Score = 241 bits (616), Expect = 7e-62, Method: Composition-based stats. Identities = 77/260 (29%), Positives = 134/260 (51%), Gaps = 5/260 (1%) Query: 5 RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64 D L + G++ I + + +AI R + E + I+G ++F++ Sbjct: 24 LDVQVILSDIMGVTKDFFIANSHINVSINTIKKFNHAIQRRINREPVAYIIGKKEFWSQD 83 Query: 65 LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124 ++ T PRPETELL+ + F K + +LD+GTG+G + L++LKE +G Sbjct: 84 FAVNQATLVPRPETELLIYKVVDFF-----KNKRINVLDIGTGSGCILLSILKELDLSRG 138 Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184 VG+DIS KA++ A+ N+ + + D G +D+IVSNPPYI S + L Sbjct: 139 VGIDISTKAIKTAQINSKNLNLFHQSKFKVFDISKFNVGKYDLIVSNPPYIPSKDIKNLS 198 Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244 ++ +++P ++L+GG+DGL R + + L K+GL ++EIG+NQ + V + Sbjct: 199 KDIINYEPLVALNGGLDGLDLIRKVIYKSNSLLKKNGLLAIEIGFNQYLKVSSLLRQYGF 258 Query: 245 FLVNAFKDYGGNDRVLLFCR 264 ++ DY N R ++ + Sbjct: 259 REMSRQCDYNHNVRCIISTK 278 >gi|260063120|ref|YP_003196200.1| putative protoporphyrinogen oxidase [Robiginitalea biformata HTCC2501] gi|88784689|gb|EAR15859.1| putative protoporphyrinogen oxidase [Robiginitalea biformata HTCC2501] Length = 304 Score = 241 bits (616), Expect = 7e-62, Method: Composition-based stats. Identities = 81/263 (30%), Positives = 118/263 (44%), Gaps = 15/263 (5%) Query: 10 FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69 L L + ++P +L + L NA+ + + + I G F ++ L + Sbjct: 30 LLEHYLDLPRFVLGLEPGKMLTREEEAPLFNALSQLAAGQPVQYITGTARFLDMDLRVGP 89 Query: 70 DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129 PRPETE LV L + + + ILD+GTG+G + L L K P + +DI Sbjct: 90 GALIPRPETEELVRWVLERHAADLREGN---ILDIGTGSGCIALGLAKSLPAARVTALDI 146 Query: 130 SCKALEIAKSNAVTNGVSER-----FDTLQSDWFSSV------EGLFDVIVSNPPYIESV 178 S +ALE+A+ NA G+ R + +W S+ +D+I+SNPPYI Sbjct: 147 SGEALEVARENARHLGLDVRLVRADIRNPEGEWPESILNPEGEWPGYDLIISNPPYIPRG 206 Query: 179 IVDCLGLEVRDFDPRISLDG-GIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237 L + VRD +PR +L D L +YR IA RHL G VEI + Sbjct: 207 QEGQLAVHVRDHEPREALFAPDSDPLLYYRHIAGFSRRHLRGGGWLYVEIHEDFGAPTAE 266 Query: 238 IFESRKLFLVNAFKDYGGNDRVL 260 +F L V+ KD G DR L Sbjct: 267 LFREAGLLEVSLKKDIFGKDRFL 289 >gi|169351466|ref|ZP_02868404.1| hypothetical protein CLOSPI_02246 [Clostridium spiroforme DSM 1552] gi|169291688|gb|EDS73821.1| hypothetical protein CLOSPI_02246 [Clostridium spiroforme DSM 1552] Length = 285 Score = 241 bits (616), Expect = 8e-62, Method: Composition-based stats. Identities = 71/262 (27%), Positives = 112/262 (42%), Gaps = 8/262 (3%) Query: 7 SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66 + + H++ + D +D + I I G F+ Sbjct: 25 AKVLFYHLANKEPHELYLMYDEEVDKELEKQFLMGMEEYYNGRPIQYIKGVETFFGRDFK 84 Query: 67 LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126 ++ + PR ETE LV++ L + + D+GTG+GA+ ++L E P K Sbjct: 85 VNENVLIPRYETEELVENILYRIDDYFSGYKNITLCDVGTGSGAIAISLALEEPKLKVYA 144 Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG---LFDVIVSNPPYIESVIVDCL 183 DIS AL +AK NA N + + L D + D+ VSNPPYI + Sbjct: 145 TDISDLALTVAKENA--NNLKADVEFLVGDMLQPLIEKNLKVDIFVSNPPYIPQE--QEI 200 Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR- 242 V+D +P ++L GG DGL YR I + V+ LN+ L + E+G++Q+ + + Sbjct: 201 EAVVKDNEPHVALFGGNDGLYFYRKIFERVNELLNERALLAFEMGFDQRELMEEALQKYF 260 Query: 243 KLFLVNAFKDYGGNDRVLLFCR 264 KD G DR+L R Sbjct: 261 PNDPYEIIKDINGKDRMLFIYR 282 >gi|308071168|ref|YP_003872773.1| HemK-like protein [Paenibacillus polymyxa E681] gi|305860447|gb|ADM72235.1| HemK-like protein [Paenibacillus polymyxa E681] Length = 299 Score = 241 bits (616), Expect = 8e-62, Method: Composition-based stats. Identities = 75/264 (28%), Positives = 114/264 (43%), Gaps = 5/264 (1%) Query: 1 MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60 ++ ++ L V GL + I R E I+G ++F Sbjct: 36 LEPQHNARLLLEHVLGLEGTAFYAALGDPFPSTAKEAWERIIARKAAGEPAQYIIGRQEF 95 Query: 61 YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120 Y +S PRPETELLV++ L R+ + LD+G G+GA+ + L E P Sbjct: 96 YGRPFMVSPSVLIPRPETELLVEAILQHG-DRLWPSGAPQALDIGAGSGAIAVTLAAERP 154 Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVI 179 ++ DIS AL++A + + D + G D++VSNPPYI + Sbjct: 155 SWRVAAGDISAAALKVAAH--NAAANGAAVEFREGDLLAPFAGTRVDILVSNPPYIPAAD 212 Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 + L EVRD +PR++LDGG DGL YR + + + L E+G Q DV + Sbjct: 213 IAGLQPEVRDHEPRMALDGGPDGLGPYRAMLEQLGLLQAPPRLIGFELGMGQARDVAGLL 272 Query: 240 ESRK-LFLVNAFKDYGGNDRVLLF 262 E + D G +R +L Sbjct: 273 EQAGHWKNIIIVPDLAGIERHVLG 296 >gi|251782312|ref|YP_002996614.1| peptide release factor-glutamine N5-methyltransferase [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|242390941|dbj|BAH81400.1| peptide release factor-glutamine N5-methyltransferase [Streptococcus dysgalactiae subsp. equisimilis GGS_124] Length = 279 Score = 241 bits (615), Expect = 8e-62, Method: Composition-based stats. Identities = 75/246 (30%), Positives = 120/246 (48%), Gaps = 8/246 (3%) Query: 17 LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRP 76 SS ++ + + L + +H S + G F +++L++ PRP Sbjct: 34 WSSLDFLLHQNQEVSSGDCLLLEKIFMDLSQHLSPQYLTGRAYFRDLQLSVDQRVLIPRP 93 Query: 77 ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136 ETE LVD LA + + +LD+GTG+GA+ ++L KE P ++ DIS L + Sbjct: 94 ETEELVDLILAEN-----PDTPLSVLDIGTGSGAIAISLKKERPAWQLTASDISSDVLSL 148 Query: 137 AKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL 196 A+ NA + + SD FS + G FD+IVSNPPYI D +GL V +P ++L Sbjct: 149 AQDNASHYQLD--ITFIVSDVFSQLSGTFDMIVSNPPYIAYEDKDEVGLNVYQSEPHLAL 206 Query: 197 DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDYGG 255 DG + YR I + S +L++ G EIGY Q + + + V +D G Sbjct: 207 FAAEDGYAIYRRIIEEASNYLSEKGKLYFEIGYKQGEGIKALVNTHFPQKRVRVLRDVFG 266 Query: 256 NDRVLL 261 +R+++ Sbjct: 267 KERMVV 272 >gi|57234022|ref|YP_181924.1| HemK family modification methylase [Dehalococcoides ethenogenes 195] gi|57224470|gb|AAW39527.1| modification methylase, HemK family [Dehalococcoides ethenogenes 195] Length = 277 Score = 241 bits (615), Expect = 9e-62, Method: Composition-based stats. Identities = 70/259 (27%), Positives = 115/259 (44%), Gaps = 10/259 (3%) Query: 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61 +A ++ L G+S Q+ ++ + L + + R L+ E I G ++FY Sbjct: 21 EARLEAEILLRHTLGISRVQLHLELERELHPDKEAAYFQTLKRRLEGEPSAYITGAKEFY 80 Query: 62 NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121 + PRPETE L++ AL + + I D+GTG+GA+ + L E Sbjct: 81 GRAFQVDKRVLIPRPETEHLIEKALRIARS----YESPYIADIGTGSGAIAITLALELKD 136 Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181 DIS +ALE+A++NA + +R + D S+ + D++++N PY+ + Sbjct: 137 AYVYATDISAEALEVARNNAAEYRLEKRLMFYRGDLLESLPEMVDILMANLPYVPTAEAG 196 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 L +P +LDGG DGL YR + + L G +EIG +Q + + Sbjct: 197 LLKG-----EPVSALDGGADGLDIYRRLIPVLPGKLRPGGTALLEIGIHQSEVLANYIKE 251 Query: 242 R-KLFLVNAFKDYGGNDRV 259 V DY G RV Sbjct: 252 YLPQAAVEISPDYAGIPRV 270 >gi|262195717|ref|YP_003266926.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Haliangium ochraceum DSM 14365] gi|262079064|gb|ACY15033.1| protein-(glutamine-N5) methyltransferase, release factor-specific [Haliangium ochraceum DSM 14365] Length = 288 Score = 241 bits (615), Expect = 9e-62, Method: Composition-based stats. Identities = 72/265 (27%), Positives = 121/265 (45%), Gaps = 7/265 (2%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 ++ L V G ++ +D + L D + I R L E + ++G ++F++ Sbjct: 26 PRLEAQVLLAHVLGCDRTRLYMDFEKPLGDDELASYRGLIQRRLSGEPVAYLVGHQEFWS 85 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + + + PR +TE +++ L R +RI D+ TG+GA+ + L E P Sbjct: 86 LSFQVGPEVLIPRRDTETVIEQVLDQIGAR---DAALRIADVATGSGAIAITLAHELPSA 142 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIV 180 + D+S A +A NA N V R + D + + G FDV+VSN PY+ + + Sbjct: 143 SVIATDLSQAAAAMATDNAARNQVDARVEVRVGDLLAPLAGEAPFDVLVSNLPYVPAGDI 202 Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240 + L EV+ +PR++LDGG DGL R + L+ GL +E G++Q V + + Sbjct: 203 EGLAPEVQR-EPRLALDGGDDGLHLLRRLIADAPALLSDTGLLVLEHGFDQDAAVRALID 261 Query: 241 SRK-LFLVNAFKDYGGNDRVLLFCR 264 + D G RV R Sbjct: 262 ATGAFEPAQTRLDLGKQPRVSWARR 286 >gi|46446287|ref|YP_007652.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Candidatus Protochlamydia amoebophila UWE25] gi|46399928|emb|CAF23377.1| putative HemK protein [Candidatus Protochlamydia amoebophila UWE25] Length = 279 Score = 240 bits (614), Expect = 1e-61, Method: Composition-based stats. Identities = 77/261 (29%), Positives = 119/261 (45%), Gaps = 4/261 (1%) Query: 3 ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62 A R++ L + + L + N + R +K E + I G DFY Sbjct: 19 AKREAQDLLGSILKCDRSTLYTRHSQDLSLEEWQTCQNYLKRRMKGEPLAYIQGSIDFYG 78 Query: 63 VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122 + ++ PR ETE+LVD + L +K + DL +G+G + +AL K+ P Sbjct: 79 CSIQVNPFVLIPRQETEILVDKISTY-LSHQKKLSGKILWDLCSGSGCIGIALKKKFPQL 137 Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181 + D+S AL +A+SNA N V + LQ D EG I+ NPPYI Sbjct: 138 HVISSDLSSAALSLARSNAQDNQVE--VEFLQGDLLEPFEGRRAHFIICNPPYISEAEFK 195 Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 L LEV++F+P+++L GG GL Y+ +A+ + +L EIGY Q + +IF+S Sbjct: 196 DLDLEVKEFEPKMALVGGETGLEIYQRLAEILPNYLYPHAKIWFEIGYKQGDSLKKIFKS 255 Query: 242 RKLFLVNAFKDYGGNDRVLLF 262 D+ G+ R Sbjct: 256 SYWKRAFLENDWAGHHRFFFL 276 >gi|184154904|ref|YP_001843244.1| protoporphyrinogen oxidase [Lactobacillus fermentum IFO 3956] gi|183226248|dbj|BAG26764.1| protoporphyrinogen oxidase [Lactobacillus fermentum IFO 3956] Length = 283 Score = 240 bits (614), Expect = 1e-61, Method: Composition-based stats. Identities = 64/256 (25%), Positives = 119/256 (46%), Gaps = 8/256 (3%) Query: 7 SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66 + L + S ++ + + + AI R E ++G F+ + Sbjct: 28 AQFILEMLHDWSMTDLLANNRQPMPVEEATRYQRAITRVASSEPAQYVVGKAPFFGRKFV 87 Query: 67 LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126 ++ D P ETE LV+ L + +++LDLGTG+G + + L E P ++ Sbjct: 88 VNRDVLIPETETEELVEWVLD----SMPADKELKVLDLGTGSGVIGITLALERPKWQVTL 143 Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLF