HHsearch alignment for GI: 254780877 and conserved domain: CHL00095
>CHL00095 clpC Clp protease ATP binding subunit.
Probab=99.26 E-value=6.4e-07 Score=75.18 Aligned_cols=191 Identities=14% Similarity=0.208 Sum_probs=113.1
Q ss_pred HCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCC-CCCCC
Q ss_conf 71799999999999999982899633899999986188766899999739998999999999997459547897-77706
Q gi|254780877|r 5 KYSDLMRNVLQSAQTYALAQGHQNLVPEHVLHIFLEDEQGAVYSLIQCSGGDIAQLKDYNQTVLSKIPKVTGGG-AQVYL 83 (853)
Q Consensus 5 kFS~~a~~vL~~A~~~A~~~~H~~Vt~EHLLlaLL~~~~s~i~~iL~~~gvd~~~L~~~le~~L~k~~k~~~~~-~~~~~ 83 (853)
T Consensus 79 ~~s~~~~~vL~~A~~~a~~~~~~~I~~ehLllall~e~~~~a~~iL~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (823)
T CHL00095 79 PFTPRAKRVLELSLEEARILGHNYIGTEHLLLGLIREGEGVAARVLENLNVDLPKVRSLIINLIGEIAEVILGGGTSREK 158 (823)
T ss_pred CCCHHHHHHHHHHHHHHHHCCCCEECHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCC
T ss_conf 88879999999999999982998043999999997089747999999879999999999999845456556788666656
Q ss_pred CHHHHHHHHHHHHHHHHCC-CCCCC----HHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf 9899999999999999719-87025----999876687277517889997599989999999987377887877754676
Q gi|254780877|r 84 SQPLAVILSKSEEIAKKSG-DSFVT----AEKFLLAMVMETGGIGESLKKCGLKFSRLEESIKKLRKGRVADSVNAEQGF 158 (853)
Q Consensus 84 S~~l~rvL~~A~~~A~~~g-~~~I~----~ehLLlAIl~e~~s~a~iL~~~gi~~~~l~e~i~~~~~~~~~~~~~~e~~~ 158 (853)
T Consensus 159 ~~~L~ky~~dLT~~A~~GklDpvIGRd~EI~r~i~IL~RR~KNNpiLvGepGVGKTAIvEGLA~rI~~g~VP~~L--~~- 235 (823)
T CHL00095 159 TPTLEEFGNNLTKMAYEGNLDPVIGRDKEIERVIQILGRRTKNNPILIGEPGVGKTAIAEGLAQRIANRDVPDIL--ED- 235 (823)
T ss_pred CHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHCCCCCHHH--CC-
T ss_conf 556999978889999838999875956999999999977324885023799987999999999976088998687--59-
Q ss_pred CHHHHHHHHHHHHHHCCCCCCCCC-HHHHHHHHHHHHCCCCCCCEEEE
Q ss_conf 107886443569987298533333-57899999996336777866895
Q gi|254780877|r 159 DALKKYCRDLTEEARNGKLDPVIG-RDDEMRRAIQVLSRRTKNNPVLI 205 (853)
Q Consensus 159 ~~L~ky~~DLTe~Ar~GkLDPVIG-Re~EI~~~~~iL~r~~k~n~~lv 205 (853)
T Consensus 236 --~~i~sLDl~~L~AGtky---RGeFEeRlk~il~ei~-~~~-~iILF 276 (823)
T CHL00095 236 --KLVLTLDIGLLLAGTKY---RGEFEERIKKIMDEIK-KAN-NIILV 276 (823)
T ss_pred --CCEEEEEHHHHHHCCCC---CHHHHHHHHHHHHHHH-HCC-CEEEE
T ss_conf --93688428877533422---2679999999999998-579-86999