HHsearch alignment for GI: 254780877 and conserved domain: CHL00176
>CHL00176 ftsH cell division protein; Validated.
Probab=99.28 E-value=2e-09 Score=95.51 Aligned_cols=160 Identities=24% Similarity=0.434 Sum_probs=115.7
Q ss_pred CCCCCCCHHH---HHHHHHHHH---------CCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCHHHCCCEEEEEEHH
Q ss_conf 8533333578---999999963---------3677786689528874077799999998734899844457437887313
Q gi|254780877|r 176 KLDPVIGRDD---EMRRAIQVL---------SRRTKNNPVLIGDPGVGKTAIIEGLASRIINGDIPESLKGKRLMALDMG 243 (853)
Q Consensus 176 kLDPVIGRe~---EI~~~~~iL---------~r~~k~n~~lvGe~GvGKtaive~la~~i~~~~vp~~l~~~~i~~ld~~ 243 (853)
T Consensus 175 tF~DVaG~~eaK~el~EivdfLk~P~k~~~~Gak~PkGvLL~GpPGTGKTlLAkAvAg---Ea~v-------pF~~~sgs 244 (631)
T CHL00176 175 TFNDVAGVEEAKEELEEVVTFLKKPERFTAVGAKIPKGVLLVGPPGTGKTLLAKAIAG---EAEV-------PFFSISGS 244 (631)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHCCHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHC---CCCC-------CEEEEEHH
T ss_conf 7532288589999999999983595887644996896589889899878899999856---5588-------46998837
Q ss_pred HHHCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCHHHHCC---CCCCCCCCCHHHHHHHHH-------CCCCEEEEEE
Q ss_conf 542174542024545899999986079976999636277302---666554335888876531-------2466048997
Q gi|254780877|r 244 ALIAGAKFRGEFEERLKSLLCEIRSEDGEIILFIDELHVLVG---AGKTDGAMDASNLLKPSL-------ARGELHCIGA 313 (853)
Q Consensus 244 ~l~ag~~~rg~~e~r~~~i~~~~~~~~~~~ilfide~h~~~g---aG~~~g~~Daan~LKP~L-------arG~l~~Iga 313 (853)
T Consensus 245 ~F~--e~~vGvga~rVR~LF~~Ar~~-aP~IiFIDEiDaig~~Rg~~~~gg~~e~e~tlnqLL~emDGf~~~~gViViaA 321 (631)
T CHL00176 245 EFV--EMFVGVGAARVRDLFKKAKEN-SPCIVFIDEIDAVGRQRGAGVGGGNDEREQTLNQLLTEMDGFEGNKGVIVIAA 321 (631)
T ss_pred HHH--HHHCCHHHHHHHHHHHHHHHC-CCEEEEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEE
T ss_conf 855--642155589999999999863-99699987101201147898889850899999999998428887888699982
Q ss_pred ECHHHHHHHHHCCHHHHH--CCC-EEECCCCCHHHHHHHHHHH
Q ss_conf 448999997300111320--231-1111577767899999997
Q gi|254780877|r 314 TTLDEYRKYIEKDPALAR--RFQ-SLLVGEPTVTDTISILRGL 353 (853)
Q Consensus 314 TT~~Eyrk~iEkD~Al~R--RFq-~i~V~Eps~~~t~~iL~gl 353 (853)
T Consensus 322 TNrpd~-----LDpALlRPGRFDR~I~V~lPD~~gR~~IL~vh 359 (631)
T CHL00176 322 TNRIDI-----LDAALLRPGRFDRQVTVSLPDFEGRLDILKVH 359 (631)
T ss_pred CCCCCC-----CCHHHCCCCCCCEEEEECCCCHHHHHHHHHHH
T ss_conf 588554-----56866268877549982698989999999999