HHsearch alignment for GI: 254780877 and conserved domain: COG0466
>COG0466 Lon ATP-dependent Lon protease, bacterial type [Posttranslational modification, protein turnover, chaperones].
Probab=99.95 E-value=1.3e-23 Score=210.99 Aligned_cols=442 Identities=24% Similarity=0.356 Sum_probs=265.6
Q ss_pred HHCCHHHHHCCCEEECCCCC-HHHHHHHHHHHHHHHHHHCCC--CCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
Q ss_conf 30011132023111115777-678999999978986541496--101589999986333202457674778999999999
Q gi|254780877|r 323 IEKDPALARRFQSLLVGEPT-VTDTISILRGLKERYEQHHKV--RISDSALVSAAVLSNRYITDRFLPDKAIDLMDEASA 399 (853)
Q Consensus 323 iEkD~Al~RRFq~i~V~Eps-~~~t~~iL~gl~~~yE~~H~V--~i~d~al~~av~ls~rYi~~r~lPDKAIDllDeA~A 399 (853)
T Consensus 104 ~~~~~~~~a~~~~i~~~~~~~~~~~~al~~~i~~~~~~~~~l~~~~~~e~l~~~~-----~i~---~~~---klad~iaa 172 (782)
T COG0466 104 SDEEEFFEAEIELLPDEPIDEEREIEALVRSILSEFEEYAKLNKKIPPEELQSLN-----SID---DPG---KLADTIAA 172 (782)
T ss_pred CCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH-----CCC---CHH---HHHHHHHH
T ss_conf 2677716999886377765432679999999999999999845578999997775-----156---457---89999998
Q ss_pred HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 87541022214578879999974456999850222356656899987689999999999998886566765599999998
Q gi|254780877|r 400 RVRMQIDTKPEVLDELDRRIICLKIEKEALKKEKDSFSKGRLIELEKELSSLEEKSHSLTLRWQEGQRKILYVADLKKRL 479 (853)
Q Consensus 400 ~~~i~~~~~P~~l~~l~r~i~~l~~e~~~L~~e~d~~~~~rl~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~l 479 (853)
T Consensus 173 ~l~~~~~~kQ~iLe~~-~v~~Rlek~l~~l~~ei~------~~~~ek~I~~kVk~~----------meK~QREyyL~EQl 235 (782)
T COG0466 173 HLPLKLEEKQEILETL-DVKERLEKLLDLLEKEID------LLQLEKRIRKKVKEQ----------MEKSQREYYLREQL 235 (782)
T ss_pred HCCCCHHHHHHHHHHC-CHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHH----------HHHHHHHHHHHHHH
T ss_conf 5778789999998718-899999999999999999------999999999999998----------77888999999999
Q ss_pred HHHHHHHHHHHHCC-HHHHH-HHHHHCCHHHHHHH--HHHHHHHHCCCCCCCHHCCCHHHHHHHHHHHHCCCHHHHHHCC
Q ss_conf 87488888864211-15676-54320110689999--9999975112677200016866789998766178667751000
Q gi|254780877|r 480 ESMRNELAIAQRQG-HFERA-GELAYGLIPKTEKE--LDEAEKADSTAEDMVQEVVTSDNIANIVSRWTGIPVDKMLESD 555 (853)
Q Consensus 480 ~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~V~~~dVa~vvS~~TGIPv~kl~~~E 555 (853)
T Consensus 236 KaIqkELG~~~d~~~e~~~~~~kie~~~~p~evkek~~~El~kL----~~m~~~SaE~~ViRnYlDwll~lPW~~~sk~~ 311 (782)
T COG0466 236 KAIQKELGEDDDDKDEVEELREKIEKLKLPKEAKEKAEKELKKL----ETMSPMSAEATVIRNYLDWLLDLPWGKRSKDK 311 (782)
T ss_pred HHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH----HCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHH
T ss_conf 99999858886545589999999751699989999999999998----50799991688998999999828876554213
Q ss_pred CHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCHH
Q ss_conf 00001235547767459489999999999874101236566512898726786168899999998723776530022447
Q gi|254780877|r 556 REKFLRIETEISKSVIGQSAAVESVSNALRRFRAGLQDPQRPMGSFMFLGPTGVGKTELVKSLARLLFDDENSMIRIDMS 635 (853)
Q Consensus 556 ~ekLl~l~~~l~~~v~gq~~ai~~v~~~~~~~~~gl~~~~~p~~~flf~GptGvGKTelak~la~~lf~~~~~lir~dMs 635 (853)
T Consensus 312 ~D-l~~a~~iLd~dHYGLekVKeRIlEyLAV~~l-~~~~kGpI--LcLVGPPGVGKTSLgkSIA~al---~RkfvR~sLG 384 (782)
T COG0466 312 LD-LKKAEKILDKDHYGLEKVKERILEYLAVQKL-TKKLKGPI--LCLVGPPGVGKTSLGKSIAKAL---GRKFVRISLG 384 (782)
T ss_pred HH-HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH-HCCCCCCE--EEEECCCCCCCHHHHHHHHHHH---CCCEEEEECC
T ss_conf 22-9999987443556711689999999999986-14678857--9997899887011899999995---8977999547
Q ss_pred HHCCCCCC----CHHHCCCCHHCCCCCCCCCCHHHHCCCCCEEEEHHHHHCCHH----HHHHHHHHHH---CCEEECCC-
Q ss_conf 74034532----013047711203566774211322156410220214414989----9999999840---45788799-
Q gi|254780877|r 636 EYMEKHSV----SRLIGSPPGYVGYEEGGALTEAVRRHPYQVVLFDEIEKAHSD----VHNILLQVLD---DGRLTDSQ- 703 (853)
Q Consensus 636 ey~e~~~v----s~LiGappGYvG~~~gg~Lte~vr~~P~sVil~DEiEKah~~----v~~~llqild---~G~ltd~~- 703 (853)
T Consensus 385 GvrDEAEIRGHRRTYIGaMPGrIiQ----~mkka~~~NP--v~LLDEIDKm~ss~rGDPaSALLEVLDPEQN~~F~DhYL 458 (782)
T COG0466 385 GVRDEAEIRGHRRTYIGAMPGKIIQ----GMKKAGVKNP--VFLLDEIDKMGSSFRGDPASALLEVLDPEQNNTFSDHYL 458 (782)
T ss_pred CCCCHHHHCCCCCCCCCCCCHHHHH----HHHHHCCCCC--EEEEECHHHCCCCCCCCHHHHHHHHCCHHHCCCHHHCCC
T ss_conf 6542777535531233568728999----9998677687--478640333167777886888886269765676122201
Q ss_pred CCEEECCCCEEEECCCHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 97783033155954851268764032679999999998628857726668158628899899999999999999999985
Q gi|254780877|r 704 GRTVDFRNTLIIMTSNLGAEYLIEDGDSVHDKVMGIVRSAFKPEFLNRLDEIILFEKLRKEDMAKIVRIQLGRVLSLIKE 783 (853)
Q Consensus 704 G~~v~f~n~iii~TsN~G~~~~~~~~~~~~~~~~~~l~~~f~peflnRid~iv~F~~l~~~~~~~i~~~~l~~l~~~l~~ 783 (853)
T Consensus 459 ev~yDLS~VmFiaTANs----l----------------~tIP~PLlDRM-EiI~lsgYt~~EKl~IAk~~L--iPk~~~~ 515 (782)
T COG0466 459 EVPYDLSKVMFIATANS----L----------------DTIPAPLLDRM-EVIRLSGYTEDEKLEIAKRHL--IPKQLKE 515 (782)
T ss_pred CCCCCHHHEEEEEECCC----C----------------CCCCHHHHCCE-EEEEECCCCHHHHHHHHHHHC--CHHHHHH
T ss_conf 67664432588860375----1----------------32986784303-056426888699999999844--5689997
Q ss_pred CCCE---EEECHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 7989---99988999999970898220621579999987334999999708688
Q gi|254780877|r 784 RNIS---MDFDDQVIDWLSCRGYDPSYGARPLKRVIQRYIQNPLAERVLSQTIS 834 (853)
Q Consensus 784 ~~i~---l~~~~~~~~~l~~~~~~~~~GaR~l~r~i~~~i~~~la~~il~~~~~ 834 (853)
T Consensus 516 ~gL~~~el~i~d~ai~~iI~~-YTREAGVR~LeR~i~k-i~RK~~~~i~~~~~k 567 (782)
T COG0466 516 HGLKKGELTITDEAIKDIIRY-YTREAGVRNLEREIAK-ICRKAAKKILLKKEK 567 (782)
T ss_pred CCCCCCCEEECHHHHHHHHHH-HHHHHHHHHHHHHHHH-HHHHHHHHHHHCCCC
T ss_conf 599823355658999999998-7676210389999999-999999999725756