HHsearch alignment for GI: 254780877 and conserved domain: COG0593

>COG0593 DnaA ATPase involved in DNA replication initiation [DNA replication, recombination, and repair].
Probab=97.72  E-value=0.00062  Score=50.92  Aligned_cols=212  Identities=19%  Similarity=0.392  Sum_probs=114.9

Q ss_pred             HHHHHHCCHHH-HHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCC--CCCCHHHHCCCC
Q ss_conf             47767459489-999999999874101236566512898726786168899999998723776530--022447740345
Q gi|254780877|r  565 EISKSVIGQSA-AVESVSNALRRFRAGLQDPQRPMGSFMFLGPTGVGKTELVKSLARLLFDDENSM--IRIDMSEYMEKH  641 (853)
Q Consensus       565 ~l~~~v~gq~~-ai~~v~~~~~~~~~gl~~~~~p~~~flf~GptGvGKTelak~la~~lf~~~~~l--ir~dMsey~e~~  641 (853)
T Consensus        85 tFdnFv~g~~N~~A~aa~~~va~------~~g~~~nplfi~G~~GlGKTHLl~Aign~~~~~~~~a~v~y~~se~f~~~~  158 (408)
T COG0593          85 TFDNFVVGPSNRLAYAAAKAVAE------NPGGAYNPLFIYGGVGLGKTHLLQAIGNEALANGPNARVVYLTSEDFTNDF  158 (408)
T ss_pred             CHHHEEECCCHHHHHHHHHHHHH------CCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHH
T ss_conf             55422047744999999999875------668868957998799997899999999999862998648850489989999


Q ss_pred             CCCHHHCCCCHHCCCCCCCCCCHHHHCC-CCCEEEEHHHHHCCH------HHHHHHHHHHHCCEEECCCCCEEECCCCEE
Q ss_conf             3201304771120356677421132215-641022021441498------999999998404578879997783033155
Q gi|254780877|r  642 SVSRLIGSPPGYVGYEEGGALTEAVRRH-PYQVVLFDEIEKAHS------DVHNILLQVLDDGRLTDSQGRTVDFRNTLI  714 (853)
Q Consensus       642 ~vs~LiGappGYvG~~~gg~Lte~vr~~-P~sVil~DEiEKah~------~v~~~llqild~G~ltd~~G~~v~f~n~ii  714 (853)
T Consensus       159 -v~a~~~----------~~--~~~Fk~~y~~dlllIDDiq~l~gk~~~qeefFh~FN~l~~~~k--------------qI  211 (408)
T COG0593         159 -VKALRD----------NE--MEKFKEKYSLDLLLIDDIQFLAGKERTQEEFFHTFNALLENGK--------------QI  211 (408)
T ss_pred             -HHHHHH----------HH--HHHHHHHHCCCEEEECHHHHHCCCHHHHHHHHHHHHHHHHCCC--------------EE
T ss_conf             -999885----------04--8888876426735551386756771579999999998885088--------------79


Q ss_pred             EECCCHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHCCCC--CEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECH
Q ss_conf             954851268764032679999999998628857726668--158628899899999999999999999985798999988
Q gi|254780877|r  715 IMTSNLGAEYLIEDGDSVHDKVMGIVRSAFKPEFLNRLD--EIILFEKLRKEDMAKIVRIQLGRVLSLIKERNISMDFDD  792 (853)
Q Consensus       715 i~TsN~G~~~~~~~~~~~~~~~~~~l~~~f~peflnRid--~iv~F~~l~~~~~~~i~~~~l~~l~~~l~~~~i~l~~~~  792 (853)
T Consensus       212 vltsdr~P-------~~l---------~~~~~rL~SR~~~Gl~~~I~~Pd~e~r~aiL~k-------ka~~~~--~~i~~  266 (408)
T COG0593         212 VLTSDRPP-------KEL---------NGLEDRLRSRLEWGLVVEIEPPDDETRLAILRK-------KAEDRG--IEIPD  266 (408)
T ss_pred             EEECCCCC-------HHH---------CCCCHHHHHHHHCEEEEEECCCCHHHHHHHHHH-------HHHHCC--CCCCH
T ss_conf             99707883-------221---------103588998986305775279888999999999-------998658--88887


Q ss_pred             HHHHHHHHCCCCCCCCCHHHHHHHHH----------HHHHHHHHHHHCCCCCCCC
Q ss_conf             99999997089822062157999998----------7334999999708688978
Q gi|254780877|r  793 QVIDWLSCRGYDPSYGARPLKRVIQR----------YIQNPLAERVLSQTISDGD  837 (853)
Q Consensus       793 ~~~~~l~~~~~~~~~GaR~l~r~i~~----------~i~~~la~~il~~~~~~g~  837 (853)
T Consensus       267 ev~~~la~~~-~~n--vReLegaL~~l~~~a~~~~~~iTi~~v~e~L~~~~~~~~  318 (408)
T COG0593         267 EVLEFLAKRL-DRN--VRELEGALNRLDAFALFTKRAITIDLVKEILKDLLRAGE  318 (408)
T ss_pred             HHHHHHHHHH-HCC--HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCC
T ss_conf             9999999970-030--999999999999999853875769999999998640145