HHsearch alignment for GI: 254780877 and conserved domain: COG0593
>COG0593 DnaA ATPase involved in DNA replication initiation [DNA replication, recombination, and repair].
Probab=97.72 E-value=0.00062 Score=50.92 Aligned_cols=212 Identities=19% Similarity=0.392 Sum_probs=114.9
Q ss_pred HHHHHHCCHHH-HHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCC--CCCCHHHHCCCC
Q ss_conf 47767459489-999999999874101236566512898726786168899999998723776530--022447740345
Q gi|254780877|r 565 EISKSVIGQSA-AVESVSNALRRFRAGLQDPQRPMGSFMFLGPTGVGKTELVKSLARLLFDDENSM--IRIDMSEYMEKH 641 (853)
Q Consensus 565 ~l~~~v~gq~~-ai~~v~~~~~~~~~gl~~~~~p~~~flf~GptGvGKTelak~la~~lf~~~~~l--ir~dMsey~e~~ 641 (853)
T Consensus 85 tFdnFv~g~~N~~A~aa~~~va~------~~g~~~nplfi~G~~GlGKTHLl~Aign~~~~~~~~a~v~y~~se~f~~~~ 158 (408)
T COG0593 85 TFDNFVVGPSNRLAYAAAKAVAE------NPGGAYNPLFIYGGVGLGKTHLLQAIGNEALANGPNARVVYLTSEDFTNDF 158 (408)
T ss_pred CHHHEEECCCHHHHHHHHHHHHH------CCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHH
T ss_conf 55422047744999999999875------668868957998799997899999999999862998648850489989999
Q ss_pred CCCHHHCCCCHHCCCCCCCCCCHHHHCC-CCCEEEEHHHHHCCH------HHHHHHHHHHHCCEEECCCCCEEECCCCEE
Q ss_conf 3201304771120356677421132215-641022021441498------999999998404578879997783033155
Q gi|254780877|r 642 SVSRLIGSPPGYVGYEEGGALTEAVRRH-PYQVVLFDEIEKAHS------DVHNILLQVLDDGRLTDSQGRTVDFRNTLI 714 (853)
Q Consensus 642 ~vs~LiGappGYvG~~~gg~Lte~vr~~-P~sVil~DEiEKah~------~v~~~llqild~G~ltd~~G~~v~f~n~ii 714 (853)
T Consensus 159 -v~a~~~----------~~--~~~Fk~~y~~dlllIDDiq~l~gk~~~qeefFh~FN~l~~~~k--------------qI 211 (408)
T COG0593 159 -VKALRD----------NE--MEKFKEKYSLDLLLIDDIQFLAGKERTQEEFFHTFNALLENGK--------------QI 211 (408)
T ss_pred -HHHHHH----------HH--HHHHHHHHCCCEEEECHHHHHCCCHHHHHHHHHHHHHHHHCCC--------------EE
T ss_conf -999885----------04--8888876426735551386756771579999999998885088--------------79
Q ss_pred EECCCHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHCCCC--CEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECH
Q ss_conf 954851268764032679999999998628857726668--158628899899999999999999999985798999988
Q gi|254780877|r 715 IMTSNLGAEYLIEDGDSVHDKVMGIVRSAFKPEFLNRLD--EIILFEKLRKEDMAKIVRIQLGRVLSLIKERNISMDFDD 792 (853)
Q Consensus 715 i~TsN~G~~~~~~~~~~~~~~~~~~l~~~f~peflnRid--~iv~F~~l~~~~~~~i~~~~l~~l~~~l~~~~i~l~~~~ 792 (853)
T Consensus 212 vltsdr~P-------~~l---------~~~~~rL~SR~~~Gl~~~I~~Pd~e~r~aiL~k-------ka~~~~--~~i~~ 266 (408)
T COG0593 212 VLTSDRPP-------KEL---------NGLEDRLRSRLEWGLVVEIEPPDDETRLAILRK-------KAEDRG--IEIPD 266 (408)
T ss_pred EEECCCCC-------HHH---------CCCCHHHHHHHHCEEEEEECCCCHHHHHHHHHH-------HHHHCC--CCCCH
T ss_conf 99707883-------221---------103588998986305775279888999999999-------998658--88887
Q ss_pred HHHHHHHHCCCCCCCCCHHHHHHHHH----------HHHHHHHHHHHCCCCCCCC
Q ss_conf 99999997089822062157999998----------7334999999708688978
Q gi|254780877|r 793 QVIDWLSCRGYDPSYGARPLKRVIQR----------YIQNPLAERVLSQTISDGD 837 (853)
Q Consensus 793 ~~~~~l~~~~~~~~~GaR~l~r~i~~----------~i~~~la~~il~~~~~~g~ 837 (853)
T Consensus 267 ev~~~la~~~-~~n--vReLegaL~~l~~~a~~~~~~iTi~~v~e~L~~~~~~~~ 318 (408)
T COG0593 267 EVLEFLAKRL-DRN--VRELEGALNRLDAFALFTKRAITIDLVKEILKDLLRAGE 318 (408)
T ss_pred HHHHHHHHHH-HCC--HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCC
T ss_conf 9999999970-030--999999999999999853875769999999998640145