HHsearch alignment for GI: 254780877 and conserved domain: COG1061

>COG1061 SSL2 DNA or RNA helicases of superfamily II [Transcription / DNA replication, recombination, and repair].

Probab=95.84  E-value=0.045  Score=35.82  Aligned_cols=42  Identities=12%  Similarity=0.267  Sum_probs=29.5

Q ss_pred             HHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHHCC
Q ss_conf             57899999996336777866895288740777999999987348
Q gi|254780877|r  183 RDDEMRRAIQVLSRRTKNNPVLIGDPGVGKTAIIEGLASRIING  226 (853)
Q Consensus       183 Re~EI~~~~~iL~r~~k~n~~lvGe~GvGKtaive~la~~i~~~  226 (853)
T Consensus        41 Q~~al~a~~~~~~~--~~~gvivlpTGaGKT~va~~~~~~~~~~   82 (442)
T COG1061          41 QEEALDALVKNRRT--ERRGVIVLPTGAGKTVVAAEAIAELKRS   82 (442)
T ss_pred             HHHHHHHHHHHCCC--CCCEEEEECCCCCHHHHHHHHHHHHCCC
T ss_conf             99999999962225--7867999679998899999999982698