HHsearch alignment for GI: 254780877 and conserved domain: COG1239

>COG1239 ChlI Mg-chelatase subunit ChlI [Coenzyme metabolism].
Probab=96.86  E-value=0.048  Score=35.59  Aligned_cols=181  Identities=24%  Similarity=0.357  Sum_probs=99.8

Q ss_pred             CEEEECCCCCCHHHHHHHHHHHHHCCCC------------C------------------HHHCCCEEEEEEHHHHHCCCC
Q ss_conf             6689528874077799999998734899------------8------------------444574378873135421745
Q gi|254780877|r  201 NPVLIGDPGVGKTAIIEGLASRIINGDI------------P------------------ESLKGKRLMALDMGALIAGAK  250 (853)
Q Consensus       201 n~~lvGe~GvGKtaive~la~~i~~~~v------------p------------------~~l~~~~i~~ld~~~l~ag~~  250 (853)
T Consensus        40 gvLI~G~kGtaKSt~~Rala~LLp~~~~V~gc~f~cdP~~P~~~c~~c~~k~~e~~~~~~~~r~v~~v~lPl~a------  113 (423)
T COG1239          40 GALIAGEKGTAKSTLARALADLLPEIEVVIGCPFNCDPDDPEEMCDECRAKGDELEWLPREKRKVPFVALPLGA------  113 (423)
T ss_pred             EEEEECCCCCCHHHHHHHHHHHCCCCCEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEECCEECCCCCC------
T ss_conf             26876688752779999999867963321688788998870555199986202324454221003122388763------


Q ss_pred             CCCHHHHHHHH------HHHH---------HHHCCCCEEEEECCHHHHCCCCCCCCCCCHHHHHHHHHCCC---------
Q ss_conf             42024545899------9999---------86079976999636277302666554335888876531246---------
Q gi|254780877|r  251 FRGEFEERLKS------LLCE---------IRSEDGEIILFIDELHVLVGAGKTDGAMDASNLLKPSLARG---------  306 (853)
Q Consensus       251 ~rg~~e~r~~~------i~~~---------~~~~~~~~ilfide~h~~~gaG~~~g~~Daan~LKP~LarG---------  306 (853)
T Consensus       114 ----teDrvvGslDi~ka~~~g~~af~PGlLa~An-RGIlYvDEvnlL~--------d~lvd~LLd~aaeG~n~vereGi  180 (423)
T COG1239         114 ----TEDRLVGSLDIEKALEEGPKAFQPGLLARAN-RGILYVDEVNLLD--------DHLVDALLDVAAEGVNDVEREGI  180 (423)
T ss_pred             ----CHHHHCCCCCHHHHHHCCCCCCCCCCHHHCC-CCEEEEECCCCCC--------HHHHHHHHHHHHHCCCEEEECCE
T ss_conf             ----0433004567999972683002775110035-8879872334351--------89999999999717740335750


Q ss_pred             ------CEEEEEEECHHHHHHHHHCCHHHHHCCC-EEECCCCC-HHHHHHHH-HHHHHHHHH----HCCCCC-CHHHHHH
Q ss_conf             ------6048997448999997300111320231-11115777-67899999-997898654----149610-1589999
Q gi|254780877|r  307 ------ELHCIGATTLDEYRKYIEKDPALARRFQ-SLLVGEPT-VTDTISIL-RGLKERYEQ----HHKVRI-SDSALVS  372 (853)
Q Consensus       307 ------~l~~IgaTT~~Eyrk~iEkD~Al~RRFq-~i~V~Eps-~~~t~~iL-~gl~~~yE~----~H~V~i-~d~al~~  372 (853)
T Consensus       181 si~hpa~fvligTmNPEeGe----LrpqLlDRfg~~v~~~~~~~~~~rv~Ii~r~~~--f~~~Pe~f~~~~~~~~~~lR~  254 (423)
T COG1239         181 SIRHPARFLLIGTMNPEEGE----LRPQLLDRFGLEVDTHYPLDLEERVEIIRRRLA--FEAVPEAFLEKYADAQRALRA  254 (423)
T ss_pred             EECCCCCEEEEEECCCCCCC----CCHHHHHHHCCEEECCCCCCHHHHHHHHHHHHH--HHCCCHHHHHHHHHHHHHHHH
T ss_conf             31367617999644854466----324667541115623478878888999999887--500829999999999999999


Q ss_pred             HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHC
Q ss_conf             9863332024576747789999999998754102
Q gi|254780877|r  373 AAVLSNRYITDRFLPDKAIDLMDEASARVRMQID  406 (853)
Q Consensus       373 av~ls~rYi~~r~lPDKAIDllDeA~A~~~i~~~  406 (853)
T Consensus       255 ~ii~ar~~l~~V~l~~~~~~~ia~~~~~~~v~g~  288 (423)
T COG1239         255 RIIAARSLLSEVELDDDAETKIAELCARLAVDGH  288 (423)
T ss_pred             HHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCC
T ss_conf             9999984466646767799999999998565787