HHsearch alignment for GI: 254780877 and conserved domain: COG1239
>COG1239 ChlI Mg-chelatase subunit ChlI [Coenzyme metabolism].
Probab=96.86 E-value=0.048 Score=35.59 Aligned_cols=181 Identities=24% Similarity=0.357 Sum_probs=99.8
Q ss_pred CEEEECCCCCCHHHHHHHHHHHHHCCCC------------C------------------HHHCCCEEEEEEHHHHHCCCC
Q ss_conf 6689528874077799999998734899------------8------------------444574378873135421745
Q gi|254780877|r 201 NPVLIGDPGVGKTAIIEGLASRIINGDI------------P------------------ESLKGKRLMALDMGALIAGAK 250 (853)
Q Consensus 201 n~~lvGe~GvGKtaive~la~~i~~~~v------------p------------------~~l~~~~i~~ld~~~l~ag~~ 250 (853)
T Consensus 40 gvLI~G~kGtaKSt~~Rala~LLp~~~~V~gc~f~cdP~~P~~~c~~c~~k~~e~~~~~~~~r~v~~v~lPl~a------ 113 (423)
T COG1239 40 GALIAGEKGTAKSTLARALADLLPEIEVVIGCPFNCDPDDPEEMCDECRAKGDELEWLPREKRKVPFVALPLGA------ 113 (423)
T ss_pred EEEEECCCCCCHHHHHHHHHHHCCCCCEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEECCEECCCCCC------
T ss_conf 26876688752779999999867963321688788998870555199986202324454221003122388763------
Q ss_pred CCCHHHHHHHH------HHHH---------HHHCCCCEEEEECCHHHHCCCCCCCCCCCHHHHHHHHHCCC---------
Q ss_conf 42024545899------9999---------86079976999636277302666554335888876531246---------
Q gi|254780877|r 251 FRGEFEERLKS------LLCE---------IRSEDGEIILFIDELHVLVGAGKTDGAMDASNLLKPSLARG--------- 306 (853)
Q Consensus 251 ~rg~~e~r~~~------i~~~---------~~~~~~~~ilfide~h~~~gaG~~~g~~Daan~LKP~LarG--------- 306 (853)
T Consensus 114 ----teDrvvGslDi~ka~~~g~~af~PGlLa~An-RGIlYvDEvnlL~--------d~lvd~LLd~aaeG~n~vereGi 180 (423)
T COG1239 114 ----TEDRLVGSLDIEKALEEGPKAFQPGLLARAN-RGILYVDEVNLLD--------DHLVDALLDVAAEGVNDVEREGI 180 (423)
T ss_pred ----CHHHHCCCCCHHHHHHCCCCCCCCCCHHHCC-CCEEEEECCCCCC--------HHHHHHHHHHHHHCCCEEEECCE
T ss_conf ----0433004567999972683002775110035-8879872334351--------89999999999717740335750
Q ss_pred ------CEEEEEEECHHHHHHHHHCCHHHHHCCC-EEECCCCC-HHHHHHHH-HHHHHHHHH----HCCCCC-CHHHHHH
Q ss_conf ------6048997448999997300111320231-11115777-67899999-997898654----149610-1589999
Q gi|254780877|r 307 ------ELHCIGATTLDEYRKYIEKDPALARRFQ-SLLVGEPT-VTDTISIL-RGLKERYEQ----HHKVRI-SDSALVS 372 (853)
Q Consensus 307 ------~l~~IgaTT~~Eyrk~iEkD~Al~RRFq-~i~V~Eps-~~~t~~iL-~gl~~~yE~----~H~V~i-~d~al~~ 372 (853)
T Consensus 181 si~hpa~fvligTmNPEeGe----LrpqLlDRfg~~v~~~~~~~~~~rv~Ii~r~~~--f~~~Pe~f~~~~~~~~~~lR~ 254 (423)
T COG1239 181 SIRHPARFLLIGTMNPEEGE----LRPQLLDRFGLEVDTHYPLDLEERVEIIRRRLA--FEAVPEAFLEKYADAQRALRA 254 (423)
T ss_pred EECCCCCEEEEEECCCCCCC----CCHHHHHHHCCEEECCCCCCHHHHHHHHHHHHH--HHCCCHHHHHHHHHHHHHHHH
T ss_conf 31367617999644854466----324667541115623478878888999999887--500829999999999999999
Q ss_pred HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHC
Q ss_conf 9863332024576747789999999998754102
Q gi|254780877|r 373 AAVLSNRYITDRFLPDKAIDLMDEASARVRMQID 406 (853)
Q Consensus 373 av~ls~rYi~~r~lPDKAIDllDeA~A~~~i~~~ 406 (853)
T Consensus 255 ~ii~ar~~l~~V~l~~~~~~~ia~~~~~~~v~g~ 288 (423)
T COG1239 255 RIIAARSLLSEVELDDDAETKIAELCARLAVDGH 288 (423)
T ss_pred HHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCC
T ss_conf 9999984466646767799999999998565787