HHsearch alignment for GI: 254780877 and conserved domain: COG1373

>COG1373 Predicted ATPase (AAA+ superfamily) [General function prediction only].
Probab=96.60  E-value=0.087  Score=33.48  Aligned_cols=165  Identities=20%  Similarity=0.284  Sum_probs=95.2

Q ss_pred             CHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCHHHCCCEEEEEEHHHHHCCCCCCCHHHHHHHH
Q ss_conf             35789999999633677786689528874077799999998734899844457437887313542174542024545899
Q gi|254780877|r  182 GRDDEMRRAIQVLSRRTKNNPVLIGDPGVGKTAIIEGLASRIINGDIPESLKGKRLMALDMGALIAGAKFRGEFEERLKS  261 (853)
Q Consensus       182 GRe~EI~~~~~iL~r~~k~n~~lvGe~GvGKtaive~la~~i~~~~vp~~l~~~~i~~ld~~~l~ag~~~rg~~e~r~~~  261 (853)
T Consensus        21 ~~~~~~~~l~~~~~~~~~-i~~i~GpR~~GKTtllk~l~~~~~~~----------~iy~~~~d~~~~---~~~l~d~~~~   86 (398)
T COG1373          21 ERRKLLPRLIKKLDLRPF-IILILGPRQVGKTTLLKLLIKGLLEE----------IIYINFDDLRLD---RIELLDLLRA   86 (398)
T ss_pred             HHHHHHHHHHHHHCCCCC-EEEEECCCCCCHHHHHHHHHHHCCCC----------EEEEECCCCCCC---HHHHHHHHHH
T ss_conf             367677998765035785-49998886477899999999747773----------599973620001---3567789999


Q ss_pred             HHHHHHHCCCCEEEEECCHHHHCCCCCCCCCCCHHHHHHHHHCCCCE--EEEEEECHHHHHHHHHCCHHHHHCCCEEECC
Q ss_conf             99998607997699963627730266655433588887653124660--4899744899999730011132023111115
Q gi|254780877|r  262 LLCEIRSEDGEIILFIDELHVLVGAGKTDGAMDASNLLKPSLARGEL--HCIGATTLDEYRKYIEKDPALARRFQSLLVG  339 (853)
Q Consensus       262 i~~~~~~~~~~~ilfide~h~~~gaG~~~g~~Daan~LKP~LarG~l--~~IgaTT~~Eyrk~iEkD~Al~RRFq~i~V~  339 (853)
T Consensus        87 ~~~~-~~~-~~~yifLDEIq~v~---------~W~~~lk~l~d~~~~~v~itgsss~ll~~~~---s~~L~GR~~~~~l~  152 (398)
T COG1373          87 YIEL-KER-EKSYIFLDEIQNVP---------DWERALKYLYDRGNLDVLITGSSSSLLSKEI---SESLAGRGKDLELY  152 (398)
T ss_pred             HHHH-HCC-CCCEEEEEEECCCH---------HHHHHHHHHHCCCCCEEEEECCCHHHHCCCH---HHHCCCCEEEEEEC
T ss_conf             9985-222-57459998333761---------0899999997567750999837167541330---23249982378984


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCHH
Q ss_conf             7776789999999789865414961015899999863332024576747
Q gi|254780877|r  340 EPTVTDTISILRGLKERYEQHHKVRISDSALVSAAVLSNRYITDRFLPD  388 (853)
Q Consensus       340 Eps~~~t~~iL~gl~~~yE~~H~V~i~d~al~~av~ls~rYi~~r~lPD  388 (853)
T Consensus       153 PlSF~Efl~~~~---------~~~~~~----~~-~~~f~~Yl~~GGfP~  187 (398)
T COG1373         153 PLSFREFLKLKG---------EEIEPS----KL-ELLFEKYLETGGFPE  187 (398)
T ss_pred             CCCHHHHHHHCC---------CCCCHH----HH-HHHHHHHHHHCCCCH
T ss_conf             888899864135---------210025----67-999999877289856