HHsearch alignment for GI: 254780877 and conserved domain: COG1373
>COG1373 Predicted ATPase (AAA+ superfamily) [General function prediction only].
Probab=96.60 E-value=0.087 Score=33.48 Aligned_cols=165 Identities=20% Similarity=0.284 Sum_probs=95.2
Q ss_pred CHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCHHHCCCEEEEEEHHHHHCCCCCCCHHHHHHHH
Q ss_conf 35789999999633677786689528874077799999998734899844457437887313542174542024545899
Q gi|254780877|r 182 GRDDEMRRAIQVLSRRTKNNPVLIGDPGVGKTAIIEGLASRIINGDIPESLKGKRLMALDMGALIAGAKFRGEFEERLKS 261 (853)
Q Consensus 182 GRe~EI~~~~~iL~r~~k~n~~lvGe~GvGKtaive~la~~i~~~~vp~~l~~~~i~~ld~~~l~ag~~~rg~~e~r~~~ 261 (853)
T Consensus 21 ~~~~~~~~l~~~~~~~~~-i~~i~GpR~~GKTtllk~l~~~~~~~----------~iy~~~~d~~~~---~~~l~d~~~~ 86 (398)
T COG1373 21 ERRKLLPRLIKKLDLRPF-IILILGPRQVGKTTLLKLLIKGLLEE----------IIYINFDDLRLD---RIELLDLLRA 86 (398)
T ss_pred HHHHHHHHHHHHHCCCCC-EEEEECCCCCCHHHHHHHHHHHCCCC----------EEEEECCCCCCC---HHHHHHHHHH
T ss_conf 367677998765035785-49998886477899999999747773----------599973620001---3567789999
Q ss_pred HHHHHHHCCCCEEEEECCHHHHCCCCCCCCCCCHHHHHHHHHCCCCE--EEEEEECHHHHHHHHHCCHHHHHCCCEEECC
Q ss_conf 99998607997699963627730266655433588887653124660--4899744899999730011132023111115
Q gi|254780877|r 262 LLCEIRSEDGEIILFIDELHVLVGAGKTDGAMDASNLLKPSLARGEL--HCIGATTLDEYRKYIEKDPALARRFQSLLVG 339 (853)
Q Consensus 262 i~~~~~~~~~~~ilfide~h~~~gaG~~~g~~Daan~LKP~LarG~l--~~IgaTT~~Eyrk~iEkD~Al~RRFq~i~V~ 339 (853)
T Consensus 87 ~~~~-~~~-~~~yifLDEIq~v~---------~W~~~lk~l~d~~~~~v~itgsss~ll~~~~---s~~L~GR~~~~~l~ 152 (398)
T COG1373 87 YIEL-KER-EKSYIFLDEIQNVP---------DWERALKYLYDRGNLDVLITGSSSSLLSKEI---SESLAGRGKDLELY 152 (398)
T ss_pred HHHH-HCC-CCCEEEEEEECCCH---------HHHHHHHHHHCCCCCEEEEECCCHHHHCCCH---HHHCCCCEEEEEEC
T ss_conf 9985-222-57459998333761---------0899999997567750999837167541330---23249982378984
Q ss_pred CCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCHH
Q ss_conf 7776789999999789865414961015899999863332024576747
Q gi|254780877|r 340 EPTVTDTISILRGLKERYEQHHKVRISDSALVSAAVLSNRYITDRFLPD 388 (853)
Q Consensus 340 Eps~~~t~~iL~gl~~~yE~~H~V~i~d~al~~av~ls~rYi~~r~lPD 388 (853)
T Consensus 153 PlSF~Efl~~~~---------~~~~~~----~~-~~~f~~Yl~~GGfP~ 187 (398)
T COG1373 153 PLSFREFLKLKG---------EEIEPS----KL-ELLFEKYLETGGFPE 187 (398)
T ss_pred CCCHHHHHHHCC---------CCCCHH----HH-HHHHHHHHHHCCCCH
T ss_conf 888899864135---------210025----67-999999877289856