HHsearch alignment for GI: 254780877 and conserved domain: COG1419

Probab=96.50  E-value=0.0028  Score=45.64  Aligned_cols=85  Identities=31%  Similarity=0.511  Sum_probs=45.1

Q ss_pred             CCCEEEEEECCCCHHHHH-HHHHHHHHHCCC-CC--CCCCCCH---------HHHCCCCCCCHHHCCCCHHCCCCCCCCC
Q ss_conf             651289872678616889-999999872377-65--3002244---------7740345320130477112035667742
Q gi|254780877|r  596 RPMGSFMFLGPTGVGKTE-LVKSLARLLFDD-EN--SMIRIDM---------SEYMEKHSVSRLIGSPPGYVGYEEGGAL  662 (853)
Q Consensus       596 ~p~~~flf~GptGvGKTe-lak~la~~lf~~-~~--~lir~dM---------sey~e~~~vs~LiGappGYvG~~~gg~L  662 (853)
T Consensus       201 ~~~~vi~LVGPTGVGKTTTlAKLAar~~~~~~~~kVaiITtDtYRIGA~EQLk~Y------a~im~vp~~vv-~-~~~el  272 (407)
T COG1419         201 EQKRVIALVGPTGVGKTTTLAKLAARYVMLKKKKKVAIITTDTYRIGAVEQLKTY------ADIMGVPLEVV-Y-SPKEL  272 (407)
T ss_pred             CCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHH------HHHHCCCEEEE-C-CHHHH
T ss_conf             4685799989988758879999999997532576068997144115289999999------99869955996-3-99999


Q ss_pred             CHHHHC-CCCCEEEEHHHHHCCHHHHH
Q ss_conf             113221-56410220214414989999
Q gi|254780877|r  663 TEAVRR-HPYQVVLFDEIEKAHSDVHN  688 (853)
Q Consensus       663 te~vr~-~P~sVil~DEiEKah~~v~~  688 (853)
T Consensus       273 ~~ai~~l~~~d~ILVDTaGrs~~D~~~  299 (407)
T COG1419         273 AEAIEALRDCDVILVDTAGRSQYDKEK  299 (407)
T ss_pred             HHHHHHHHCCCEEEEECCCCCCCCHHH
T ss_conf             999998531888999689988337899