HHsearch alignment for GI: 254780877 and conserved domain: COG1485

Probab=96.14  E-value=0.071  Score=34.18  Aligned_cols=89  Identities=27%  Similarity=0.384  Sum_probs=39.5

Q ss_pred             CCEEEECCCCCCHHHHHHHHHHHHHCCCCCHHHCCCEEE----EE----EHHHHHCCCCCCCHHHHHHHHHHHHHHHCCC
Q ss_conf             866895288740777999999987348998444574378----87----3135421745420245458999999860799
Q gi|254780877|r  200 NNPVLIGDPGVGKTAIIEGLASRIINGDIPESLKGKRLM----AL----DMGALIAGAKFRGEFEERLKSLLCEIRSEDG  271 (853)
Q Consensus       200 ~n~~lvGe~GvGKtaive~la~~i~~~~vp~~l~~~~i~----~l----d~~~l~ag~~~rg~~e~r~~~i~~~~~~~~~  271 (853)
T Consensus        66 ~GlYl~GgVGrGKT~LMD~Fy~~lp~~~------k~R~HFh~FM~~vH~~l~~l~-g~~------dpl~~iA~~~~~~--  130 (367)
T COG1485          66 RGLYLWGGVGRGKTMLMDLFYESLPGER------KRRLHFHRFMARVHQRLHTLQ-GQT------DPLPPIADELAAE--  130 (367)
T ss_pred             CEEEEECCCCCCHHHHHHHHHHHCCCCC------CCCCCHHHHHHHHHHHHHHHC-CCC------CCCHHHHHHHHHC--
T ss_conf             3588889978649999999986587645------665507799999999999971-888------8657999999841--


Q ss_pred             CEEEEECCHHHH-CCCCCCCCCCCHHHHHHHHHCCCCE
Q ss_conf             769996362773-0266655433588887653124660
Q gi|254780877|r  272 EIILFIDELHVL-VGAGKTDGAMDASNLLKPSLARGEL  308 (853)
Q Consensus       272 ~~ilfide~h~~-~gaG~~~g~~Daan~LKP~LarG~l  308 (853)
T Consensus       131 ~~vLCfDEF~VtDI~-----DAMiL~rL~~~Lf~~GV~  163 (367)
T COG1485         131 TRVLCFDEFEVTDIA-----DAMILGRLLEALFARGVV  163 (367)
T ss_pred             CCEEEEEEEEECCHH-----HHHHHHHHHHHHHHCCCE
T ss_conf             788986303623757-----889999999999977968