HHsearch alignment for GI: 254780877 and conserved domain: COG2766
>COG2766 PrkA Putative Ser protein kinase [Signal transduction mechanisms].
Probab=96.74 E-value=0.0089 Score=41.54 Aligned_cols=67 Identities=18% Similarity=0.231 Sum_probs=36.2
Q ss_pred EEEEECHHHHHHHHH--CCHHHHHCCCEEECCCC-CHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
Q ss_conf 899744899999730--01113202311111577-767899999997898654149610158999998633
Q gi|254780877|r 310 CIGATTLDEYRKYIE--KDPALARRFQSLLVGEP-TVTDTISILRGLKERYEQHHKVRISDSALVSAAVLS 377 (853)
Q Consensus 310 ~IgaTT~~Eyrk~iE--kD~Al~RRFq~i~V~Ep-s~~~t~~iL~gl~~~yE~~H~V~i~d~al~~av~ls 377 (853)
T Consensus 300 IvahsNesE~q~fk~n~~nEAf~dRi~~v~vPY~L~vseE~kIYEKll~~s~-ls~~h~APhTL~~aa~Fs 369 (649)
T COG2766 300 IVAHSNESEWQTFKNNKNNEAFLDRIYKVKVPYCLRVSEEAKIYEKLLQNSE-LSDAHCAPHTLEVAALFS 369 (649)
T ss_pred EEEECCCHHHHHHHCCCCHHHHHHHEEEEECCEEEEECHHHHHHHHHHCCCC-CCCCCCCCHHHHHHHHHH
T ss_conf 7841672888875038734888741046545501232188899999825466-665665805899999888