HHsearch alignment for GI: 254780877 and conserved domain: COG3284

>COG3284 AcoR Transcriptional activator of acetoin/glycerol metabolism [Secondary metabolites biosynthesis, transport, and catabolism / Transcription].
Probab=98.07  E-value=0.00021  Score=54.74  Aligned_cols=214  Identities=23%  Similarity=0.362  Sum_probs=139.9

Q ss_pred             CCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCHHHCCC
Q ss_conf             59489999999999874101236566512898726786168899999998723776530022447740345320130477
Q gi|254780877|r  571 IGQSAAVESVSNALRRFRAGLQDPQRPMGSFMFLGPTGVGKTELVKSLARLLFDDENSMIRIDMSEYMEKHSVSRLIGSP  650 (853)
Q Consensus       571 ~gq~~ai~~v~~~~~~~~~gl~~~~~p~~~flf~GptGvGKTelak~la~~lf~~~~~lir~dMsey~e~~~vs~LiGap  650 (853)
T Consensus       316 ~~~d~s~a~l~rk~~rv----~~~~~pv---ll~GEtGtGKe~laraiH~~s~-~~gpfvAvNCaAip~~liesELFGy~  387 (606)
T COG3284         316 PLLDPSRATLLRKAERV----AATDLPV---LLQGETGTGKEVLARAIHQNSE-AAGPFVAVNCAAIPEALIESELFGYV  387 (606)
T ss_pred             CCCCHHHHHHHHHHHHH----HHCCCCE---EECCCCCHHHHHHHHHHHHCCC-CCCCEEEEEECCCHHHHHHHHHHCCC
T ss_conf             45578899999999887----6247876---8538765568999999985365-56983799850344776467774457


Q ss_pred             CHH-CC-CCCCCCCCHHHHCCCCCEEEEHHHHHCCHHHHHHHHHHHHCCEEECCCC--CEEECCCCEEEECCCHHHHHHH
Q ss_conf             112-03-5667742113221564102202144149899999999840457887999--7783033155954851268764
Q gi|254780877|r  651 PGY-VG-YEEGGALTEAVRRHPYQVVLFDEIEKAHSDVHNILLQVLDDGRLTDSQG--RTVDFRNTLIIMTSNLGAEYLI  726 (853)
Q Consensus       651 pGY-vG-~~~gg~Lte~vr~~P~sVil~DEiEKah~~v~~~llqild~G~ltd~~G--~~v~f~n~iii~TsN~G~~~~~  726 (853)
T Consensus       388 ~GafTga~~kG-~-~g~~~~A~gGtlFldeIgd~p~~~Qs~LLrVl~e~~v~p~g~~~~~vdir---vi~ath~dl~~lv  462 (606)
T COG3284         388 AGAFTGARRKG-Y-KGKLEQADGGTLFLDEIGDMPLALQSRLLRVLQEGVVTPLGGTRIKVDIR---VIAATHRDLAQLV  462 (606)
T ss_pred             CCCCCCCHHCC-C-CCCCEECCCCCCHHHHHHHCHHHHHHHHHHHHHHCCEECCCCCCEEEEEE---EEECCCCCHHHHH
T ss_conf             65643300106-6-55410157876089876114189999999998618252358852157799---9834675799998


Q ss_pred             CCHHHHHHHHHHHHHHHCCHHHHCCCCC-EEECCCCCHHH--HHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHCCC
Q ss_conf             0326799999999986288577266681-58628899899--99999999999999998579899998899999997089
Q gi|254780877|r  727 EDGDSVHDKVMGIVRSAFKPEFLNRLDE-IILFEKLRKED--MAKIVRIQLGRVLSLIKERNISMDFDDQVIDWLSCRGY  803 (853)
Q Consensus       727 ~~~~~~~~~~~~~l~~~f~peflnRid~-iv~F~~l~~~~--~~~i~~~~l~~l~~~l~~~~i~l~~~~~~~~~l~~~~~  803 (853)
T Consensus       463 ~-------------~g~fredLyyrL~~~~i~lP~lr~R~d~~~~l~~~-----~~~--~~~~~~~l~~~~~~~l~~--~  520 (606)
T COG3284         463 E-------------QGRFREDLYYRLNAFVITLPPLRERSDRIPLLDRI-----LKR--ENDWRLQLDDDALARLLA--Y  520 (606)
T ss_pred             H-------------CCCCHHHHHHHHCCEEECCCCHHCCCCCHHHHHHH-----HHH--CCCCCCCCCHHHHHHHHH--C
T ss_conf             7-------------59714878887447155068611046657899999-----987--268775689999999985--7


Q ss_pred             CCCCCCHHHHHHHHHH
Q ss_conf             8220621579999987
Q gi|254780877|r  804 DPSYGARPLKRVIQRY  819 (853)
Q Consensus       804 ~~~~GaR~l~r~i~~~  819 (853)
T Consensus       521 ~WPGNirel~~v~~~~  536 (606)
T COG3284         521 RWPGNIRELDNVIERL  536 (606)
T ss_pred             CCCCCHHHHHHHHHHH
T ss_conf             8998289999999999