HHsearch alignment for GI: 254780877 and conserved domain: COG3284
>COG3284 AcoR Transcriptional activator of acetoin/glycerol metabolism [Secondary metabolites biosynthesis, transport, and catabolism / Transcription].
Probab=98.07 E-value=0.00021 Score=54.74 Aligned_cols=214 Identities=23% Similarity=0.362 Sum_probs=139.9
Q ss_pred CCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCHHHCCC
Q ss_conf 59489999999999874101236566512898726786168899999998723776530022447740345320130477
Q gi|254780877|r 571 IGQSAAVESVSNALRRFRAGLQDPQRPMGSFMFLGPTGVGKTELVKSLARLLFDDENSMIRIDMSEYMEKHSVSRLIGSP 650 (853)
Q Consensus 571 ~gq~~ai~~v~~~~~~~~~gl~~~~~p~~~flf~GptGvGKTelak~la~~lf~~~~~lir~dMsey~e~~~vs~LiGap 650 (853)
T Consensus 316 ~~~d~s~a~l~rk~~rv----~~~~~pv---ll~GEtGtGKe~laraiH~~s~-~~gpfvAvNCaAip~~liesELFGy~ 387 (606)
T COG3284 316 PLLDPSRATLLRKAERV----AATDLPV---LLQGETGTGKEVLARAIHQNSE-AAGPFVAVNCAAIPEALIESELFGYV 387 (606)
T ss_pred CCCCHHHHHHHHHHHHH----HHCCCCE---EECCCCCHHHHHHHHHHHHCCC-CCCCEEEEEECCCHHHHHHHHHHCCC
T ss_conf 45578899999999887----6247876---8538765568999999985365-56983799850344776467774457
Q ss_pred CHH-CC-CCCCCCCCHHHHCCCCCEEEEHHHHHCCHHHHHHHHHHHHCCEEECCCC--CEEECCCCEEEECCCHHHHHHH
Q ss_conf 112-03-5667742113221564102202144149899999999840457887999--7783033155954851268764
Q gi|254780877|r 651 PGY-VG-YEEGGALTEAVRRHPYQVVLFDEIEKAHSDVHNILLQVLDDGRLTDSQG--RTVDFRNTLIIMTSNLGAEYLI 726 (853)
Q Consensus 651 pGY-vG-~~~gg~Lte~vr~~P~sVil~DEiEKah~~v~~~llqild~G~ltd~~G--~~v~f~n~iii~TsN~G~~~~~ 726 (853)
T Consensus 388 ~GafTga~~kG-~-~g~~~~A~gGtlFldeIgd~p~~~Qs~LLrVl~e~~v~p~g~~~~~vdir---vi~ath~dl~~lv 462 (606)
T COG3284 388 AGAFTGARRKG-Y-KGKLEQADGGTLFLDEIGDMPLALQSRLLRVLQEGVVTPLGGTRIKVDIR---VIAATHRDLAQLV 462 (606)
T ss_pred CCCCCCCHHCC-C-CCCCEECCCCCCHHHHHHHCHHHHHHHHHHHHHHCCEECCCCCCEEEEEE---EEECCCCCHHHHH
T ss_conf 65643300106-6-55410157876089876114189999999998618252358852157799---9834675799998
Q ss_pred CCHHHHHHHHHHHHHHHCCHHHHCCCCC-EEECCCCCHHH--HHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHCCC
Q ss_conf 0326799999999986288577266681-58628899899--99999999999999998579899998899999997089
Q gi|254780877|r 727 EDGDSVHDKVMGIVRSAFKPEFLNRLDE-IILFEKLRKED--MAKIVRIQLGRVLSLIKERNISMDFDDQVIDWLSCRGY 803 (853)
Q Consensus 727 ~~~~~~~~~~~~~l~~~f~peflnRid~-iv~F~~l~~~~--~~~i~~~~l~~l~~~l~~~~i~l~~~~~~~~~l~~~~~ 803 (853)
T Consensus 463 ~-------------~g~fredLyyrL~~~~i~lP~lr~R~d~~~~l~~~-----~~~--~~~~~~~l~~~~~~~l~~--~ 520 (606)
T COG3284 463 E-------------QGRFREDLYYRLNAFVITLPPLRERSDRIPLLDRI-----LKR--ENDWRLQLDDDALARLLA--Y 520 (606)
T ss_pred H-------------CCCCHHHHHHHHCCEEECCCCHHCCCCCHHHHHHH-----HHH--CCCCCCCCCHHHHHHHHH--C
T ss_conf 7-------------59714878887447155068611046657899999-----987--268775689999999985--7
Q ss_pred CCCCCCHHHHHHHHHH
Q ss_conf 8220621579999987
Q gi|254780877|r 804 DPSYGARPLKRVIQRY 819 (853)
Q Consensus 804 ~~~~GaR~l~r~i~~~ 819 (853)
T Consensus 521 ~WPGNirel~~v~~~~ 536 (606)
T COG3284 521 RWPGNIRELDNVIERL 536 (606)
T ss_pred CCCCCHHHHHHHHHHH
T ss_conf 8998289999999999