HHsearch alignment for GI: 254780877 and conserved domain: KOG0651

Probab=97.84  E-value=5.8e-05  Score=59.29  Aligned_cols=123  Identities=24%  Similarity=0.452  Sum_probs=73.1

Q ss_pred             HHCCHHHHHHHHHHHH--------HHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCC
Q ss_conf             7459489999999999--------87410123656651289872678616889999999872377653002244774034
Q gi|254780877|r  569 SVIGQSAAVESVSNAL--------RRFRAGLQDPQRPMGSFMFLGPTGVGKTELVKSLARLLFDDENSMIRIDMSEYMEK  640 (853)
Q Consensus       569 ~v~gq~~ai~~v~~~~--------~~~~~gl~~~~~p~~~flf~GptGvGKTelak~la~~lf~~~~~lir~dMsey~e~  640 (853)
T Consensus       133 ~~ggl~~qirelre~ielpl~np~lf~rvgIk~---Pkg-~ll~GppGtGKTlla~~Vaa~m---g~nfl~v~ss~lv--  203 (388)
T KOG0651         133 NVGGLFYQIRELREVIELPLTNPELFLRVGIKP---PKG-LLLYGPPGTGKTLLARAVAATM---GVNFLKVVSSALV--  203 (388)
T ss_pred             HHCCHHHHHHHHHHHEEEECCCCHHCCCCCCCC---CCE-EEEECCCCCCHHHHHHHHHHHC---CCCEEEEEHHHHH--
T ss_conf             717838888998865574024810023457778---825-6876799986459999999865---9854774476663--


Q ss_pred             CCCCHHHCCCCHHCCCCCCCCCC-----HHHHCCCCCEEEEHHHHH-----------CCHHHHHHHHHHHHCCEEECCCC
Q ss_conf             53201304771120356677421-----132215641022021441-----------49899999999840457887999
Q gi|254780877|r  641 HSVSRLIGSPPGYVGYEEGGALT-----EAVRRHPYQVVLFDEIEK-----------AHSDVHNILLQVLDDGRLTDSQG  704 (853)
Q Consensus       641 ~~vs~LiGappGYvG~~~gg~Lt-----e~vr~~P~sVil~DEiEK-----------ah~~v~~~llqild~G~ltd~~G  704 (853)
T Consensus       204 ---~kyiGE---------saRlIRemf~yA~~~~p-ciifmdeiDAigGRr~se~Ts~dreiqrTLMeLlnqmdgfd~l~  270 (388)
T KOG0651         204 ---DKYIGE---------SARLIRDMFRYAREVIP-CIIFMDEIDAIGGRRFSEGTSSDREIQRTLMELLNQMDGFDTLH  270 (388)
T ss_pred             ---HHHCCC---------HHHHHHHHHHHHHHHCC-EEEEEHHHHHHCCEEECCCCCHHHHHHHHHHHHHHHHCCCHHCC
T ss_conf             ---300265---------78899999977865275-57751012311457733555205999999999987421401206


Q ss_pred             CEEECCCCEEEECCC
Q ss_conf             778303315595485
Q gi|254780877|r  705 RTVDFRNTLIIMTSN  719 (853)
Q Consensus       705 ~~v~f~n~iii~TsN  719 (853)
T Consensus       271 r------Vk~ImatN  279 (388)
T KOG0651         271 R------VKTIMATN  279 (388)
T ss_pred             C------CCEEEECC
T ss_conf             6------31798538