HHsearch alignment for GI: 254780877 and conserved domain: KOG0727
>KOG0727 consensus.
Probab=96.55 E-value=0.0062 Score=42.78 Aligned_cols=140 Identities=20% Similarity=0.317 Sum_probs=81.6
Q ss_pred CCEEEECCCCCCHHHHHHHHHHHHHCCCCCHHHCCCEEEEEEHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECC
Q ss_conf 86689528874077799999998734899844457437887313542174542024545899999986079976999636
Q gi|254780877|r 200 NNPVLIGDPGVGKTAIIEGLASRIINGDIPESLKGKRLMALDMGALIAGAKFRGEFEERLKSLLCEIRSEDGEIILFIDE 279 (853)
Q Consensus 200 ~n~~lvGe~GvGKtaive~la~~i~~~~vp~~l~~~~i~~ld~~~l~ag~~~rg~~e~r~~~i~~~~~~~~~~~ilfide 279 (853)
T Consensus 190 rgvllygppg~gktml~kava~~t~a----------~firvvgsefv--qkylgegprmvrdvfrlake-napsiifide 256 (408)
T KOG0727 190 RGVLLYGPPGTGKTMLAKAVANHTTA----------AFIRVVGSEFV--QKYLGEGPRMVRDVFRLAKE-NAPSIIFIDE 256 (408)
T ss_pred CCEEEECCCCCCHHHHHHHHHHCCCH----------HEEEECCHHHH--HHHHCCCCHHHHHHHHHHHC-CCCCEEEEEH
T ss_conf 62277579997578999998612611----------14463018999--99855483899999998761-6983798622
Q ss_pred HHHHCCCC--CCCCC-CCHHHHHHHH-------HCCCCEEEEEEECHHHHHHHHHCCHHHHHC---CCEEECCCCCHHHH
Q ss_conf 27730266--65543-3588887653-------124660489974489999973001113202---31111157776789
Q gi|254780877|r 280 LHVLVGAG--KTDGA-MDASNLLKPS-------LARGELHCIGATTLDEYRKYIEKDPALARR---FQSLLVGEPTVTDT 346 (853)
Q Consensus 280 ~h~~~gaG--~~~g~-~Daan~LKP~-------LarG~l~~IgaTT~~Eyrk~iEkD~Al~RR---Fq~i~V~Eps~~~t 346 (853)
T Consensus 257 idaiatkrfdaqtgadrevqril~ellnqmdgfdq~~nvkvimatnrad-----tldpallrpgrldrkiefplpdrrqk 331 (408)
T KOG0727 257 IDAIATKRFDAQTGADREVQRILIELLNQMDGFDQTTNVKVIMATNRAD-----TLDPALLRPGRLDRKIEFPLPDRRQK 331 (408)
T ss_pred HHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCC-----CCCHHHCCCCCCCCCCCCCCCCHHHH
T ss_conf 4567664124444631899999999997514767666558998327555-----66876628764344435779854665
Q ss_pred HHHHHHHHHHH
Q ss_conf 99999978986
Q gi|254780877|r 347 ISILRGLKERY 357 (853)
Q Consensus 347 ~~iL~gl~~~y 357 (853)
T Consensus 332 rlvf~titskm 342 (408)
T KOG0727 332 RLVFSTITSKM 342 (408)
T ss_pred HHHHHHHHHCC
T ss_conf 22277543102