HHsearch alignment for GI: 254780877 and conserved domain: KOG0729

Probab=97.62  E-value=0.001  Score=49.25  Aligned_cols=154  Identities=27%  Similarity=0.383  Sum_probs=100.1

Q ss_pred             CCCHHHHHHHHHHHHC-------------CCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCHHHCCCEEEEEEHHHHH
Q ss_conf             3335789999999633-------------677786689528874077799999998734899844457437887313542
Q gi|254780877|r  180 VIGRDDEMRRAIQVLS-------------RRTKNNPVLIGDPGVGKTAIIEGLASRIINGDIPESLKGKRLMALDMGALI  246 (853)
Q Consensus       180 VIGRe~EI~~~~~iL~-------------r~~k~n~~lvGe~GvGKtaive~la~~i~~~~vp~~l~~~~i~~ld~~~l~  246 (853)
T Consensus       179 vGGCKeqIEklREVVE~PlL~PErfv~LGIdPPKGvllyGPPGtGKTL~ARAVANRT----------dAcFIRViGSELV  248 (435)
T KOG0729         179 VGGCKEQIEKLREVVELPLLHPERFVNLGIDPPKGVLLYGPPGTGKTLCARAVANRT----------DACFIRVIGSELV  248 (435)
T ss_pred             CCCHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHCCC----------CCEEEEEHHHHHH
T ss_conf             536699999999988432558888875278998733786899986108999874566----------7458763118999


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCHHHHCCCCCCCCC-CC---------HHHHHHHHHCCCCEEEEEEECH
Q ss_conf             1745420245458999999860799769996362773026665543-35---------8888765312466048997448
Q gi|254780877|r  247 AGAKFRGEFEERLKSLLCEIRSEDGEIILFIDELHVLVGAGKTDGA-MD---------ASNLLKPSLARGELHCIGATTL  316 (853)
Q Consensus       247 ag~~~rg~~e~r~~~i~~~~~~~~~~~ilfide~h~~~gaG~~~g~-~D---------aan~LKP~LarG~l~~IgaTT~  316 (853)
T Consensus       249 --QKYvGEGARMVRElF-eMAr~KKACiiFFDEiDAiGGaRFDDg~ggDNEVQRTMLEli~QLDGFDpRGNIKVlmATNR  325 (435)
T KOG0729         249 --QKYVGEGARMVRELF-EMARTKKACIIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNR  325 (435)
T ss_pred             --HHHHHHHHHHHHHHH-HHHCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEECCC
T ss_conf             --998624689999999-98523652799841010226720357888727999999999986037788887589863489


Q ss_pred             HHHHHHHHCCHHHHHC---CCEEECCCCCHHHHHHHHH
Q ss_conf             9999973001113202---3111115777678999999
Q gi|254780877|r  317 DEYRKYIEKDPALARR---FQSLLVGEPTVTDTISILR  351 (853)
Q Consensus       317 ~Eyrk~iEkD~Al~RR---Fq~i~V~Eps~~~t~~iL~  351 (853)
T Consensus       326 P-----dtLDpALlRPGRlDRKVEF~LPDlegR~~I~k  358 (435)
T KOG0729         326 P-----DTLDPALLRPGRLDRKVEFGLPDLEGRTHIFK  358 (435)
T ss_pred             C-----CCCCHHHCCCCCCCCCEECCCCCCCCCCEEEE
T ss_conf             8-----87687662876423112105876235512577