HHsearch alignment for GI: 254780877 and conserved domain: KOG0730

Probab=98.89  E-value=9.1e-08  Score=82.09  Aligned_cols=159  Identities=28%  Similarity=0.444  Sum_probs=116.9

Q ss_pred             CCCHHHHHHHHHH--HH------------CCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCHHHCCCEEEEEEHHHH
Q ss_conf             3335789999999--63------------367778668952887407779999999873489984445743788731354
Q gi|254780877|r  180 VIGRDDEMRRAIQ--VL------------SRRTKNNPVLIGDPGVGKTAIIEGLASRIINGDIPESLKGKRLMALDMGAL  245 (853)
Q Consensus       180 VIGRe~EI~~~~~--iL------------~r~~k~n~~lvGe~GvGKtaive~la~~i~~~~vp~~l~~~~i~~ld~~~l  245 (853)
T Consensus       435 dIGGlE~lK~elq~~V~~p~~~pe~F~r~Gi~ppkGVLlyGPPGC~KT~lAkalAne----------~~~nFlsvkgpEL  504 (693)
T KOG0730         435 DIGGLEELKRELQQAVEWPLKHPEKFARFGISPPKGVLLYGPPGCGKTLLAKALANE----------AGMNFLSVKGPEL  504 (693)
T ss_pred             HCCCHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHH----------HCCCEEECCCHHH
T ss_conf             045789999999999861665659998725788754777789986247899998646----------3587264157899


Q ss_pred             HCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCHHHHCCCCCCCCCCCHH-----HHH---HHHHCCCCEEEEEEECHH
Q ss_conf             217454202454589999998607997699963627730266655433588-----887---653124660489974489
Q gi|254780877|r  246 IAGAKFRGEFEERLKSLLCEIRSEDGEIILFIDELHVLVGAGKTDGAMDAS-----NLL---KPSLARGELHCIGATTLD  317 (853)
Q Consensus       246 ~ag~~~rg~~e~r~~~i~~~~~~~~~~~ilfide~h~~~gaG~~~g~~Daa-----n~L---KP~LarG~l~~IgaTT~~  317 (853)
T Consensus       505 ~--sk~vGeSEr~ir~iF~kAR~~a-P~IiFfDEiDsi~~~R~g~~~-~v~~RVlsqLLtEmDG~e~~k~V~ViAATNRp  580 (693)
T KOG0730         505 F--SKYVGESERAIREVFRKARQVA-PCIIFFDEIDALAGSRGGSSS-GVTDRVLSQLLTEMDGLEALKNVLVIAATNRP  580 (693)
T ss_pred             H--HHHCCCHHHHHHHHHHHHHHCC-CEEEEHHHHHHHHHCCCCCCC-CHHHHHHHHHHHHCCCCCCCCCEEEEECCCCH
T ss_conf             8--7751825899999999986269-837744666666630478755-14899999999870041014708999505881


Q ss_pred             HHHHHHHCCHHHHH--CCCE-EECCCCCHHHHHHHHHHHHHHH
Q ss_conf             99997300111320--2311-1115777678999999978986
Q gi|254780877|r  318 EYRKYIEKDPALAR--RFQS-LLVGEPTVTDTISILRGLKERY  357 (853)
Q Consensus       318 Eyrk~iEkD~Al~R--RFq~-i~V~Eps~~~t~~iL~gl~~~y  357 (853)
T Consensus       581 d-----~ID~ALlRPGRlD~iiyVplPD~~aR~~Ilk~~~kkm  618 (693)
T KOG0730         581 D-----MIDPALLRPGRLDRIIYVPLPDLEARLEILKQCAKKM  618 (693)
T ss_pred             H-----HCCHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCC
T ss_conf             0-----1269775986533057515834788999999997339