HHsearch alignment for GI: 254780877 and conserved domain: KOG0732
>KOG0732 consensus.
Probab=96.91 E-value=0.0057 Score=43.12 Aligned_cols=88 Identities=23% Similarity=0.373 Sum_probs=56.2
Q ss_pred HHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCHHHCCCEEEEEEHHHHHCCCCCCCHHHHHHHHH
Q ss_conf 57899999996336777866895288740777999999987348998444574378873135421745420245458999
Q gi|254780877|r 183 RDDEMRRAIQVLSRRTKNNPVLIGDPGVGKTAIIEGLASRIINGDIPESLKGKRLMALDMGALIAGAKFRGEFEERLKSL 262 (853)
Q Consensus 183 Re~EI~~~~~iL~r~~k~n~~lvGe~GvGKtaive~la~~i~~~~vp~~l~~~~i~~ld~~~l~ag~~~rg~~e~r~~~i 262 (853)
T Consensus 579 ~~~e~~~~i~lic~~~---lli~~~~~~g~~~lg~aIlh---------~~~~~~v~s~~issll~d~~~-~~~~~~iv~i 645 (1080)
T KOG0732 579 RSFESNFAIRLICRPR---LLINGGKGSGQDYLGPAILH---------RLEGLPVQSLDISSLLSDEGT-EDLEEEIVHI 645 (1080)
T ss_pred HHHHCCCCHHHHCCCH---HHCCCCCCCCCCCCCHHHHH---------HHHCCCHHHHHHHHHHHCCCC-CCHHHHHHHH
T ss_conf 7541110123432708---76079866565755089999---------885140577778898755665-2478999999
Q ss_pred HHHHHHCCCCEEEEECCHHHHC
Q ss_conf 9998607997699963627730
Q gi|254780877|r 263 LCEIRSEDGEIILFIDELHVLV 284 (853)
Q Consensus 263 ~~~~~~~~~~~ilfide~h~~~ 284 (853)
T Consensus 646 ~~eaR~-~~psi~~ip~~d~w~ 666 (1080)
T KOG0732 646 FMEARK-TTPSIVFIPNVDEWA 666 (1080)
T ss_pred HHHHHC-CCCCEEECCCHHHHH
T ss_conf 998731-588334235325565