HHsearch alignment for GI: 254780877 and conserved domain: KOG0736
>KOG0736 consensus.
Probab=99.70 E-value=5e-13 Score=124.82 Aligned_cols=160 Identities=24% Similarity=0.344 Sum_probs=115.6
Q ss_pred CCCCCCCCCHHHHHHHHHHHHCCCCCC---------CEEEECCCCCCHHHHHHHHHHHHHCCCCCHHHCCCEEEEEEHHH
Q ss_conf 298533333578999999963367778---------66895288740777999999987348998444574378873135
Q gi|254780877|r 174 NGKLDPVIGRDDEMRRAIQVLSRRTKN---------NPVLIGDPGVGKTAIIEGLASRIINGDIPESLKGKRLMALDMGA 244 (853)
Q Consensus 174 ~GkLDPVIGRe~EI~~~~~iL~r~~k~---------n~~lvGe~GvGKtaive~la~~i~~~~vp~~l~~~~i~~ld~~~ 244 (853)
T Consensus 398 ~n~~-~~~~~~~~~~~l~~vl~p~~~~s~~~~~~~~~vLLhG~~g~GK~t~V~~vas~----------lg~h~~evdc~e 466 (953)
T KOG0736 398 WNSL-SPPGLEAKVLELVAVLSPQKQPSGALLTLNPSVLLHGPPGSGKTTVVRAVASE----------LGLHLLEVDCYE 466 (953)
T ss_pred HCCC-CCCCCHHHHHHHHHHHCCCCCCCHHCCCCCEEEEEECCCCCCHHHHHHHHHHH----------HCCCEEECCHHH
T ss_conf 5158-87660279999999848655853001335537998679998757999999998----------387257013898
Q ss_pred HHCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCHHHHCCCCCCCCCCCH--HHHHHH-------HHCCCCEEEEEEEC
Q ss_conf 421745420245458999999860799769996362773026665543358--888765-------31246604899744
Q gi|254780877|r 245 LIAGAKFRGEFEERLKSLLCEIRSEDGEIILFIDELHVLVGAGKTDGAMDA--SNLLKP-------SLARGELHCIGATT 315 (853)
Q Consensus 245 l~ag~~~rg~~e~r~~~i~~~~~~~~~~~ilfide~h~~~gaG~~~g~~Da--an~LKP-------~LarG~l~~IgaTT 315 (853)
T Consensus 467 l~~~s--~~~~etkl~~~f~~a~~~-~pavifl~~~dvl~--id~dgged~rl~~~i~~~ls~e~~~~~~~~~ivv~t~~ 541 (953)
T KOG0736 467 LVAES--ASHTETKLQAIFSRARRC-SPAVLFLRNLDVLG--IDQDGGEDARLLKVIRHLLSNEDFKFSCPPVIVVATTS 541 (953)
T ss_pred HHHCC--CCHHHHHHHHHHHHHHHC-CCEEEEEECCCEEE--ECCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECC
T ss_conf 86436--331378999999987526-86289872242455--33777442779999999972023567799659999625
Q ss_pred HHHHHHHHHCCHHHHHC--CCEEECCCCCHHHHHHHHHHHHH
Q ss_conf 89999973001113202--31111157776789999999789
Q gi|254780877|r 316 LDEYRKYIEKDPALARR--FQSLLVGEPTVTDTISILRGLKE 355 (853)
Q Consensus 316 ~~Eyrk~iEkD~Al~RR--Fq~i~V~Eps~~~t~~iL~gl~~ 355 (853)
T Consensus 542 s~~------~lp~~i~~~f~~ei~~~~lse~qRl~iLq~y~~ 577 (953)
T KOG0736 542 SIE------DLPADIQSLFLHEIEVPALSEEQRLEILQWYLN 577 (953)
T ss_pred CCC------CCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
T ss_conf 302------398789875265213778887889999999983