HHsearch alignment for GI: 254780877 and conserved domain: KOG0739
>KOG0739 consensus.
Probab=98.37 E-value=5.9e-06 Score=67.37 Aligned_cols=132 Identities=27% Similarity=0.475 Sum_probs=93.5
Q ss_pred HHHCCCC--CCCEEEECCCCCCHHHHHHHHHHHHHCCCCCHHHCCCEEEEEEHHHHHCCCCCCCHHHHHHHHHHHHHHHC
Q ss_conf 9633677--78668952887407779999999873489984445743788731354217454202454589999998607
Q gi|254780877|r 192 QVLSRRT--KNNPVLIGDPGVGKTAIIEGLASRIINGDIPESLKGKRLMALDMGALIAGAKFRGEFEERLKSLLCEIRSE 269 (853)
Q Consensus 192 ~iL~r~~--k~n~~lvGe~GvGKtaive~la~~i~~~~vp~~l~~~~i~~ld~~~l~ag~~~rg~~e~r~~~i~~~~~~~ 269 (853)
T Consensus 157 qlFtGkR~PwrgiLLyGPPGTGKSYLAKAVATE----------AnSTFFSvSSSDLvS--KWmGESEkLVknLFemARe~ 224 (439)
T KOG0739 157 QLFTGKRKPWRGILLYGPPGTGKSYLAKAVATE----------ANSTFFSVSSSDLVS--KWMGESEKLVKNLFEMAREN 224 (439)
T ss_pred HHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHH----------CCCCEEEEEHHHHHH--HHHCCHHHHHHHHHHHHHHC
T ss_conf 541588775425788679997577999998741----------477068730178899--87321799999999998734
Q ss_pred CCCEEEEECCHHHHCCCCCCCCCCCHHHHHHHHHC---------CCCEEEEEEECHHHHHHHHHCCHHHHHCCCE-EECC
Q ss_conf 99769996362773026665543358888765312---------4660489974489999973001113202311-1115
Q gi|254780877|r 270 DGEIILFIDELHVLVGAGKTDGAMDASNLLKPSLA---------RGELHCIGATTLDEYRKYIEKDPALARRFQS-LLVG 339 (853)
Q Consensus 270 ~~~~ilfide~h~~~gaG~~~g~~Daan~LKP~La---------rG~l~~IgaTT~~Eyrk~iEkD~Al~RRFq~-i~V~ 339 (853)
T Consensus 225 -kPSIIFiDEiDslcg~r-~enEseasRRIKTEfLVQMqGVG~d~~gvLVLgATNiP-----w~LDsAIRRRFekRIYIP 297 (439)
T KOG0739 225 -KPSIIFIDEIDSLCGSR-SENESEASRRIKTEFLVQMQGVGNDNDGVLVLGATNIP-----WVLDSAIRRRFEKRIYIP 297 (439)
T ss_pred -CCCEEEEEHHHHHCCCC-CCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCC-----HHHHHHHHHHHHCCEECC
T ss_conf -99479863444432688-77711777777778887640666588864897237884-----367799998765023010
Q ss_pred CCC
Q ss_conf 777
Q gi|254780877|r 340 EPT 342 (853)
Q Consensus 340 Eps 342 (853)
T Consensus 298 LPe 300 (439)
T KOG0739 298 LPE 300 (439)
T ss_pred CCC
T ss_conf 873