HHsearch alignment for GI: 254780877 and conserved domain: KOG0743

Probab=97.45  E-value=0.0011  Score=48.91  Aligned_cols=112  Identities=28%  Similarity=0.366  Sum_probs=77.6

Q ss_pred             CCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCHHHCCCEEEEEEHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCEE
Q ss_conf             36777866895288740777999999987348998444574378873135421745420245458999999860799769
Q gi|254780877|r  195 SRRTKNNPVLIGDPGVGKTAIIEGLASRIINGDIPESLKGKRLMALDMGALIAGAKFRGEFEERLKSLLCEIRSEDGEII  274 (853)
Q Consensus       195 ~r~~k~n~~lvGe~GvGKtaive~la~~i~~~~vp~~l~~~~i~~ld~~~l~ag~~~rg~~e~r~~~i~~~~~~~~~~~i  274 (853)
T Consensus       231 GkawKRGYLLYGPPGTGKSS~IaAmAn~----------L~ydIydLeLt~v------~~n~d--Lr~LL~~t---~~kSI  289 (457)
T KOG0743         231 GKAWKRGYLLYGPPGTGKSSFIAAMANY----------LNYDIYDLELTEV------KLDSD--LRHLLLAT---PNKSI  289 (457)
T ss_pred             CCCCCCCCEEECCCCCCHHHHHHHHHHH----------CCCCEEEEEECCC------CCCHH--HHHHHHHC---CCCCE
T ss_conf             8450004120479999888999999720----------5873677440023------68389--99999728---99718


Q ss_pred             EEECCHHHHCC---CCCC--------CCCCCHHHH---HHHHH-CCCCEEEEEEECHHHHHHHHHC-CHHHHHC
Q ss_conf             99636277302---6665--------543358888---76531-2466048997448999997300-1113202
Q gi|254780877|r  275 LFIDELHVLVG---AGKT--------DGAMDASNL---LKPSL-ARGELHCIGATTLDEYRKYIEK-DPALARR  332 (853)
Q Consensus       275 lfide~h~~~g---aG~~--------~g~~Daan~---LKP~L-arG~l~~IgaTT~~Eyrk~iEk-D~Al~RR  332 (853)
T Consensus       290 ivIEDIDcs~~l~~~~~~~~~~~~~~~~~VTlSGLLNfiDGlwSscg~ERIivFTTN-----h~EkLDPALlRp  358 (457)
T KOG0743         290 LLIEDIDCSFDLRERRKKKKENFEGDLSRVTLSGLLNFLDGLWSSCGDERIIVFTTN-----HKEKLDPALLRP  358 (457)
T ss_pred             EEEEECCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHCCCCCCCCCCEEEEEECC-----CHHHCCHHHCCC
T ss_conf             999612432304434555664546776606647756641343004887349999468-----710068866288