HHsearch alignment for GI: 254780877 and conserved domain: PRK00131
>PRK00131 aroK shikimate kinase; Reviewed.
Probab=97.69 E-value=0.0016 Score=47.50 Aligned_cols=145 Identities=23% Similarity=0.305 Sum_probs=71.2
Q ss_pred CCCCCEEEECCCCCCHHHHHHHHHHHHHCC--CCCHHHCCCEEEEEEHHHHHCCCCCCCH--HHHHHHHHHHHHHHCCCC
Q ss_conf 777866895288740777999999987348--9984445743788731354217454202--454589999998607997
Q gi|254780877|r 197 RTKNNPVLIGDPGVGKTAIIEGLASRIING--DIPESLKGKRLMALDMGALIAGAKFRGE--FEERLKSLLCEIRSEDGE 272 (853)
Q Consensus 197 ~~k~n~~lvGe~GvGKtaive~la~~i~~~--~vp~~l~~~~i~~ld~~~l~ag~~~rg~--~e~r~~~i~~~~~~~~~~ 272 (853)
T Consensus 2 ~~~~nI~liG~~GsGKTtvgk~LA~~L~~~fiD~D~~Ie--~~~g~si~~if~~---~Ge~~FR~~E~~~l~~l~~~~-~ 75 (175)
T PRK00131 2 LKGPNIVLIGMMGAGKSTIGRLLAKRLGYEFIDTDHLIE--ARAGKSIPEIFEE---EGEAGFRELEEEVLAELLQRH-N 75 (175)
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCHHHH--HHHCCCHHHHHHH---HCHHHHHHHHHHHHHHHCCCC-C
T ss_conf 999808988899999899999999995969023988999--7616999999998---588999999999999651479-8
Q ss_pred EEEEECCHHHHCCCCCCC-CCCCHHHHHHHHHCCCCEEEEEEECHHHHHHHHHCCHHHHHCCCEEECCCCCHHHHHHHHH
Q ss_conf 699963627730266655-4335888876531246604899744899999730011132023111115777678999999
Q gi|254780877|r 273 IILFIDELHVLVGAGKTD-GAMDASNLLKPSLARGELHCIGATTLDEYRKYIEKDPALARRFQSLLVGEPTVTDTISILR 351 (853)
Q Consensus 273 ~ilfide~h~~~gaG~~~-g~~Daan~LKP~LarG~l~~IgaTT~~Eyrk~iEkD~Al~RRFq~i~V~Eps~~~t~~iL~ 351 (853)
T Consensus 76 ~V---------IstGGG~v~~~~~~~~L~---~~g~-vV~L~~~~e~l~~Rl~~~~--~R---Pll~~~~~~~~l~~l~~ 137 (175)
T PRK00131 76 LV---------ISTGGGAVLREENRALLR---ERGT-VVYLDASFEELLRRLARDR--NR---PLLQTEDPKEKLRALYE 137 (175)
T ss_pred EE---------EECCCCCCCCHHHHHHHH---CCCC-EEEEECCHHHHHHHHCCCC--CC---CCCCCCCHHHHHHHHHH
T ss_conf 59---------974898226889999998---1693-7998579999999864899--99---87889986999999999
Q ss_pred HHHHHHHHHCCCCC
Q ss_conf 97898654149610
Q gi|254780877|r 352 GLKERYEQHHKVRI 365 (853)
Q Consensus 352 gl~~~yE~~H~V~i 365 (853)
T Consensus 138 ~R~~~Y~~~Ad~~I 151 (175)
T PRK00131 138 ERDPLYEEVADLTI 151 (175)
T ss_pred HHHHHHHHHCCEEE
T ss_conf 99998975389999