HHsearch alignment for GI: 254780877 and conserved domain: PRK00411
>PRK00411 cdc6 cell division control protein 6; Reviewed.
Probab=99.02 E-value=1.6e-08 Score=88.19 Aligned_cols=209 Identities=21% Similarity=0.263 Sum_probs=128.5
Q ss_pred HHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCC--CCCCCCCHHHHCCCCCCC
Q ss_conf 767459489999999999874101236566512898726786168899999998723776--530022447740345320
Q gi|254780877|r 567 SKSVIGQSAAVESVSNALRRFRAGLQDPQRPMGSFMFLGPTGVGKTELVKSLARLLFDDE--NSMIRIDMSEYMEKHSVS 644 (853)
Q Consensus 567 ~~~v~gq~~ai~~v~~~~~~~~~gl~~~~~p~~~flf~GptGvGKTelak~la~~lf~~~--~~lir~dMsey~e~~~vs 644 (853)
T Consensus 29 P~~l~~Re~Ei~~l~~~l~~~l~g----~~~~-n~~I~G~pGTGKT~~vk~v~~~l~~~~~~~~~vyINc~~~~t~~~i~ 103 (394)
T PRK00411 29 PENLPHREEQIEELAFALRPALRG----SRPS-NVLILGPPGTGKTTTVKKVFEELEEAALKVVYVYINCQIDRTRYAIL 103 (394)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHCC----CCCC-CEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHH
T ss_conf 998988599999999999999759----9998-47998899998999999999999974689659999696689899999
Q ss_pred -----HHHCCCCHHCCCCCCCCCCHHH-----HCCCCCEEEEHHHHHCC-HHHHHHHHHHHHCCEEECCCCCEEECCCCE
Q ss_conf -----1304771120356677421132-----21564102202144149-899999999840457887999778303315
Q gi|254780877|r 645 -----RLIGSPPGYVGYEEGGALTEAV-----RRHPYQVVLFDEIEKAH-SDVHNILLQVLDDGRLTDSQGRTVDFRNTL 713 (853)
Q Consensus 645 -----~LiGappGYvG~~~gg~Lte~v-----r~~P~sVil~DEiEKah-~~v~~~llqild~G~ltd~~G~~v~f~n~i 713 (853)
T Consensus 104 ~~i~~~L~~~~~p~~G~s~~-~~~~~l~~~l~~~~~~~ivvLDEiD~L~~~~~~~vLY~L~r~~~---~----~~~~~~~ 175 (394)
T PRK00411 104 SEIARSLFGHPPPSSGLSFD-ELFDKIAEYLDERDRVLIVALDDINYLVEKEGNDVLYSLLRAHE---E----YPGARIG 175 (394)
T ss_pred HHHHHHHCCCCCCCCCCCHH-HHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCHHHHHHHHCCC---C----CCCCCEE
T ss_conf 99999956998987787899-99999999861669758999965540203665089999985402---2----6887389
Q ss_pred EEECCCHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECHH
Q ss_conf 59548512687640326799999999986288577266681586288998999999999999999999857989999889
Q gi|254780877|r 714 IIMTSNLGAEYLIEDGDSVHDKVMGIVRSAFKPEFLNRLDEIILFEKLRKEDMAKIVRIQLGRVLSLIKERNISMDFDDQ 793 (853)
Q Consensus 714 ii~TsN~G~~~~~~~~~~~~~~~~~~l~~~f~peflnRid~iv~F~~l~~~~~~~i~~~~l~~l~~~l~~~~i~l~~~~~ 793 (853)
T Consensus 176 vI~IsN~---------~~~~~~Ldprv~S~l~~-------~~i~F~PY~~~qL~~IL~~R~~~a---f~-~g---v~~~~ 232 (394)
T PRK00411 176 VIGISSD---------LTFLYILDPRVKSVFGP-------EEIVFPPYTADEIFDILKDRVEEG---FY-PG---VVSDE 232 (394)
T ss_pred EEEEECC---------CCHHHHHHHHHHCCCCC-------EEEEECCCCHHHHHHHHHHHHHHC---CC-CC---CCCHH
T ss_conf 9999768---------71776640777502786-------289858999899999999999841---45-56---78978
Q ss_pred HHHHHHHCCCCCCCCCHH
Q ss_conf 999999708982206215
Q gi|254780877|r 794 VIDWLSCRGYDPSYGARP 811 (853)
Q Consensus 794 ~~~~l~~~~~~~~~GaR~ 811 (853)
T Consensus 233 ~i~~~A~~~a~~~GDaR~ 250 (394)
T PRK00411 233 VLELIADLTGREHGDARV 250 (394)
T ss_pred HHHHHHHHHHHCCCCHHH
T ss_conf 999999998550475899