HHsearch alignment for GI: 254780877 and conserved domain: PRK05342

>PRK05342 clpX ATP-dependent protease ATP-binding subunit ClpX; Provisional.
Probab=98.61  E-value=2e-06  Score=71.26  Aligned_cols=87  Identities=30%  Similarity=0.432  Sum_probs=57.9

Q ss_pred             CCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCHHHCCCEEEEEEHHHHHCCCCCCCH-HHHHHHHHHHHHH----HCCCC
Q ss_conf             778668952887407779999999873489984445743788731354217454202-4545899999986----07997
Q gi|254780877|r  198 TKNNPVLIGDPGVGKTAIIEGLASRIINGDIPESLKGKRLMALDMGALIAGAKFRGE-FEERLKSLLCEIR----SEDGE  272 (853)
Q Consensus       198 ~k~n~~lvGe~GvGKtaive~la~~i~~~~vp~~l~~~~i~~ld~~~l~ag~~~rg~-~e~r~~~i~~~~~----~~~~~  272 (853)
T Consensus       108 ~KsNILliGPTG~GKTlla~tLAk~l---~vPF~iaDA-------T~l-TEaGYVGeDVE~ii~~Llq~Ad~dve~Ae-~  175 (411)
T PRK05342        108 QKSNILLIGPTGSGKTLLAQTLARIL---NVPFAIADA-------TTL-TEAGYVGEDVENILLKLLQAADYDVEKAQ-R  175 (411)
T ss_pred             CCCCEEEECCCCCCHHHHHHHHHHHH---CCCEEEEEE-------CEE-CCCCCCCCCHHHHHHHHHHHCCCCHHHHH-C
T ss_conf             34538998999977889999999986---999899861-------200-12674560799999999998288899883-6


Q ss_pred             EEEEECCHHHHCCCCC-CCCCCCHH
Q ss_conf             6999636277302666-55433588
Q gi|254780877|r  273 IILFIDELHVLVGAGK-TDGAMDAS  296 (853)
Q Consensus       273 ~ilfide~h~~~gaG~-~~g~~Daa  296 (853)
T Consensus       176 GIV~IDEIDKIarks~~~s~trDVS  200 (411)
T PRK05342        176 GIVYIDEIDKIARKSENPSITRDVS  200 (411)
T ss_pred             CEEEEEEHHHHHHCCCCCCCCCCCC
T ss_conf             8288850234542478888877765