HHsearch alignment for GI: 254780877 and conserved domain: PRK05703

Probab=95.99  E-value=0.17  Score=31.03  Aligned_cols=71  Identities=28%  Similarity=0.371  Sum_probs=40.4

Q ss_pred             CEEEECCCCCCHHHHHHHHHHHHHC--CCCCHHHCCCEEEEEEHHHHHC-----------CCCCC-CHHHHHHHHHHHHH
Q ss_conf             6689528874077799999998734--8998444574378873135421-----------74542-02454589999998
Q gi|254780877|r  201 NPVLIGDPGVGKTAIIEGLASRIIN--GDIPESLKGKRLMALDMGALIA-----------GAKFR-GEFEERLKSLLCEI  266 (853)
Q Consensus       201 n~~lvGe~GvGKtaive~la~~i~~--~~vp~~l~~~~i~~ld~~~l~a-----------g~~~r-g~~e~r~~~i~~~~  266 (853)
T Consensus       212 vvalVGPTGVGKTTTiAKLAA~~~l~~~~~-----kV~lIT~DtyRigA~eQLk~Ya~ilgvp~~v~~~~~~l~~al~~~  286 (412)
T PRK05703        212 VVALVGPTGVGKTTTLAKLAARYALEEGKD-----KVALITLDTYRIGAVEQLKTYAKIMGIPVKVAYDPKELAKALEQL  286 (412)
T ss_pred             EEEEECCCCCCHHHHHHHHHHHHHHHCCCC-----EEEEEEECCCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHH
T ss_conf             699988888756769999999999972998-----179998376777799999999997197379847999999999871


Q ss_pred             HHCCCCEEEEECC
Q ss_conf             6079976999636
Q gi|254780877|r  267 RSEDGEIILFIDE  279 (853)
Q Consensus       267 ~~~~~~~ilfide  279 (853)
T Consensus       287 ~~~--d-lILIDT  296 (412)
T PRK05703        287 ANC--D-LILIDT  296 (412)
T ss_pred             CCC--C-EEEEEC
T ss_conf             589--9-799968