HHsearch alignment for GI: 254780877 and conserved domain: PRK06620

Probab=97.68  E-value=0.0012  Score=48.57  Aligned_cols=145  Identities=20%  Similarity=0.391  Sum_probs=83.9

Q ss_pred             EEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCHHHCCCCHHCCCCCCCCCCHHHHCCCCCEEEEHHH
Q ss_conf             89872678616889999999872377653002244774034532013047711203566774211322156410220214
Q gi|254780877|r  600 SFMFLGPTGVGKTELVKSLARLLFDDENSMIRIDMSEYMEKHSVSRLIGSPPGYVGYEEGGALTEAVRRHPYQVVLFDEI  679 (853)
Q Consensus       600 ~flf~GptGvGKTelak~la~~lf~~~~~lir~dMsey~e~~~vs~LiGappGYvG~~~gg~Lte~vr~~P~sVil~DEi  679 (853)
T Consensus        46 ~l~I~Gp~gSGKTHL~~i~~~~~----~a~~-~~-~~~------------------------~~~~~~-~~~~~~iiddi   94 (214)
T PRK06620         46 TLLIKGPSSSGKTYLTKIWQNLS----NAYI-IK-DIF------------------------FNEEIL-EKYNAFIIEDI   94 (214)
T ss_pred             EEEEECCCCCCHHHHHHHHHHHH----CCEE-EC-HHH------------------------CCHHHH-HHCCCEEEECC
T ss_conf             59998799998899999999982----8588-15-121------------------------458788-43793798467


Q ss_pred             HHCCHHHHHHHHHHHHCCEEECCCCCEEECCCCEEEECCCHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHCCCC--CEEE
Q ss_conf             41498999999998404578879997783033155954851268764032679999999998628857726668--1586
Q gi|254780877|r  680 EKAHSDVHNILLQVLDDGRLTDSQGRTVDFRNTLIIMTSNLGAEYLIEDGDSVHDKVMGIVRSAFKPEFLNRLD--EIIL  757 (853)
Q Consensus       680 EKah~~v~~~llqild~G~ltd~~G~~v~f~n~iii~TsN~G~~~~~~~~~~~~~~~~~~l~~~f~peflnRid--~iv~  757 (853)
T Consensus        95 d~~~e~~---lfhlfN----------~~~~~~~~llits~~~p~-------~~-----------~L~DL~SRl~~~~~~~  143 (214)
T PRK06620         95 ENWQEPA---LLHIFN----------IINEKQKYLLLTSSDKSR-------NF-----------TLPDLSSRIKSVLSIL  143 (214)
T ss_pred             CCCCHHH---HHHHHH----------HHHHCCCEEEEEECCCCC-------CC-----------CCCCHHHHHHCCCEEE
T ss_conf             7574679---999999----------997159879998279852-------24-----------5357899985464433


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHCCCCCCCCCHHHHHHHHH
Q ss_conf             2889989999999999999999998579899998899999997089822062157999998
Q gi|254780877|r  758 FEKLRKEDMAKIVRIQLGRVLSLIKERNISMDFDDQVIDWLSCRGYDPSYGARPLKRVIQR  818 (853)
Q Consensus       758 F~~l~~~~~~~i~~~~l~~l~~~l~~~~i~l~~~~~~~~~l~~~~~~~~~GaR~l~r~i~~  818 (853)
T Consensus       144 i~~PdD~l~~~ll~k-------~~~~r~i~i--~~~vi~yl~~ri-~Rs~--~~l~~~v~~  192 (214)
T PRK06620        144 LNSPDDELIKILIFK-------HFSISSVTI--SRQIIDFLLVNL-PREY--SKIIEILEN  192 (214)
T ss_pred             CCCCCHHHHHHHHHH-------HHHHCCCCC--CHHHHHHHHHHH-CCCH--HHHHHHHHH
T ss_conf             269898999999999-------999869988--755999999985-1789--999999999