HHsearch alignment for GI: 254780877 and conserved domain: PRK07003
>PRK07003 DNA polymerase III subunits gamma and tau; Validated.
Probab=98.74 E-value=3.6e-06 Score=69.12 Aligned_cols=194 Identities=15% Similarity=0.138 Sum_probs=80.4
Q ss_pred CCCCCCHHHHHHHHHH----CCCCHHHHH-HHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC
Q ss_conf 9870259998766872----775178899-97599989999999987377887877754676107886443569987298
Q gi|254780877|r 102 GDSFVTAEKFLLAMVM----ETGGIGESL-KKCGLKFSRLEESIKKLRKGRVADSVNAEQGFDALKKYCRDLTEEARNGK 176 (853)
Q Consensus 102 g~~~I~~ehLLlAIl~----e~~s~a~iL-~~~gi~~~~l~e~i~~~~~~~~~~~~~~e~~~~~L~ky~~DLTe~Ar~Gk 176 (853)
T Consensus 15 f~e~vGQ~~v~~~l~nal~~~rl~haylf~G~rGvGKTt~aRi~Ak~lnC~~~~~~~pcg~C~--------~C~~i~~g~ 86 (816)
T PRK07003 15 FASLVGQEHVVRALTHALDGGRLHHAYLFTGTRGVGKTTLSRIFAKALNCETGVTSQPCGVCR--------ACREIDEGR 86 (816)
T ss_pred HHHHCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCH--------HHHHHHCCC
T ss_conf 766238499999999999709863147511789888889999999986789999989787755--------578775588
Q ss_pred CCCCCC-------HHHHHHHHHHHHC---CCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCHHHCCC-----------
Q ss_conf 533333-------5789999999633---6777866895288740777999999987348998444574-----------
Q gi|254780877|r 177 LDPVIG-------RDDEMRRAIQVLS---RRTKNNPVLIGDPGVGKTAIIEGLASRIINGDIPESLKGK----------- 235 (853)
Q Consensus 177 LDPVIG-------Re~EI~~~~~iL~---r~~k~n~~lvGe~GvGKtaive~la~~i~~~~vp~~l~~~----------- 235 (853)
T Consensus 87 ~~d~iEiDaAS~~~vd~~r~l~~~~~y~p~~~r~KvyiiDEvHmls~~afnalLKtl-Ee-pP~hv~FilaTTd~~k~p~ 164 (816)
T PRK07003 87 FVDYVEMDAASNRGVDEMAALLERAVYAPVDARFKVYMIDEVHMLTNHAFNAMLKTL-EE-PPPHVKFILATTDPQKIPV 164 (816)
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCEEEEEEECHHHCCHHHHHHHHHHH-CC-CCCCEEEEEECCCHHHCCH
T ss_conf 775478635543576899999986224786674479998415433999999999840-37-9866489995588011528
Q ss_pred ----EEEEEEHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCHHHHCCCCCCCCC-CCHHHHHHHHHCCCCEEE
Q ss_conf ----378873135421745420245458999999860799769996362773026665543-358888765312466048
Q gi|254780877|r 236 ----RLMALDMGALIAGAKFRGEFEERLKSLLCEIRSEDGEIILFIDELHVLVGAGKTDGA-MDASNLLKPSLARGELHC 310 (853)
Q Consensus 236 ----~i~~ld~~~l~ag~~~rg~~e~r~~~i~~~~~~~~~~~ilfide~h~~~gaG~~~g~-~Daan~LKP~LarG~l~~ 310 (853)
T Consensus 165 tilSRc~~f~l~~~~-----~~~i~~~l~~i~~----~E~--i~~e~~al~li-a~~a~GsmRDalsl~dQaia~~~--- 229 (816)
T PRK07003 165 TVLSRCLQFNLKQMP-----AGHIVSHLERILG----EER--IAFEPQALRLL-ARAAQGSMRDALSLTDQAIAYSA--- 229 (816)
T ss_pred HHHHHHHHCCCCCCC-----HHHHHHHHHHHHH----HCC--CCCCHHHHHHH-HHHCCCCHHHHHHHHHHHHHHCC---
T ss_conf 898777652236799-----9999999999999----829--97799999999-99767737888859999998469---
Q ss_pred EEEECHHHHHH
Q ss_conf 99744899999
Q gi|254780877|r 311 IGATTLDEYRK 321 (853)
Q Consensus 311 IgaTT~~Eyrk 321 (853)
T Consensus 230 -g~~~~~~v~~ 239 (816)
T PRK07003 230 -NEVTETAVSG 239 (816)
T ss_pred -CCCCHHHHHH
T ss_conf -9737999999