HHsearch alignment for GI: 254780877 and conserved domain: PRK07132
>PRK07132 DNA polymerase III subunit delta'; Validated.
Probab=98.49 E-value=3.9e-06 Score=68.82 Aligned_cols=132 Identities=17% Similarity=0.132 Sum_probs=78.6
Q ss_pred EEEECCCCCCHHHHHHHHHHHHHCCCCCH-HHCC--CEEEEEEHHHHHCCCCCCCHHHHHHHHHHHHHHHCC---C-CEE
Q ss_conf 68952887407779999999873489984-4457--437887313542174542024545899999986079---9-769
Q gi|254780877|r 202 PVLIGDPGVGKTAIIEGLASRIINGDIPE-SLKG--KRLMALDMGALIAGAKFRGEFEERLKSLLCEIRSED---G-EII 274 (853)
Q Consensus 202 ~~lvGe~GvGKtaive~la~~i~~~~vp~-~l~~--~~i~~ld~~~l~ag~~~rg~~e~r~~~i~~~~~~~~---~-~~i 274 (853)
T Consensus 23 YLF~G~~G~Gk~~~a~~~a~~l~~~~~~~~~~~~~~~~~~~id~~~~~i~-~------~~i~~~i~~~~~~~~~~~~~Kv 95 (303)
T PRK07132 23 FLLKSNYNNDLDESILYFLNKFNNLQSLNLNLEELPYNIFLFDIFDEDLS-K------EEFLSAIEKFSFSSFVSNQKKI 95 (303)
T ss_pred EEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCHH-H------HHHHHHHHHHHHCCCCCCCEEE
T ss_conf 88678998679999999999972998788875456532304133222001-6------8899999999736655687069
Q ss_pred EEECCHHHHCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEECHHHHHHHHHCCHHHHHCCCEEECCCCCHHHHHHHHH
Q ss_conf 99636277302666554335888876531246604899744899999730011132023111115777678999999
Q gi|254780877|r 275 LFIDELHVLVGAGKTDGAMDASNLLKPSLARGELHCIGATTLDEYRKYIEKDPALARRFQSLLVGEPTVTDTISILR 351 (853)
Q Consensus 275 lfide~h~~~gaG~~~g~~Daan~LKP~LarG~l~~IgaTT~~Eyrk~iEkD~Al~RRFq~i~V~Eps~~~t~~iL~ 351 (853)
T Consensus 96 ~IIdea~~l--------t~~A~NaLLKtLEEPp~~~~fil~t~~~~~il---~TI~SRCq~~~f~~~~~~~i~~~l~ 161 (303)
T PRK07132 96 LIIKNIEKT--------SNSSLNALLKTIEEPSKNTYFLLTTKNINKVI---PTIVSRCQVINVKEPDQQKILAKLL 161 (303)
T ss_pred EEEECHHHC--------CHHHHHHHHHHCCCCCCCEEEEEEECCHHHCC---HHHHHCCEEEECCCCCHHHHHHHHH
T ss_conf 998165533--------99999999987038986848999728824383---7786366566378899999999998