HHsearch alignment for GI: 254780877 and conserved domain: PRK07132
>PRK07132 DNA polymerase III subunit delta'; Validated.
Probab=97.30 E-value=0.003 Score=45.40 Aligned_cols=152 Identities=14% Similarity=0.174 Sum_probs=88.1
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCHHHCCCCH
Q ss_conf 48999999999987410123656651289872678616889999999872377653002244774034532013047711
Q gi|254780877|r 573 QSAAVESVSNALRRFRAGLQDPQRPMGSFMFLGPTGVGKTELVKSLARLLFDDENSMIRIDMSEYMEKHSVSRLIGSPPG 652 (853)
Q Consensus 573 q~~ai~~v~~~~~~~~~gl~~~~~p~~~flf~GptGvGKTelak~la~~lf~~~~~lir~dMsey~e~~~vs~LiGappG 652 (853)
T Consensus 3 ~e~iv~~L~nai~~~k--------lsHAYLF~G~~G~Gk~~~a~~~a~~l~~~~~~~~~--~~~--~~~~~~-~id~~~~ 69 (303)
T PRK07132 3 DNNIIKSLDNLAKQNK--------ISHSFLLKSNYNNDLDESILYFLNKFNNLQSLNLN--LEE--LPYNIF-LFDIFDE 69 (303)
T ss_pred CHHHHHHHHHHHHCCC--------CCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCC--CCC--CCCCCE-EECCCCC
T ss_conf 0389999999998499--------76168867899867999999999997299878887--545--653230-4133222
Q ss_pred HCCCCCCCCCCHHHHCCC-----CCEEEEHHHHHCCHHHHHHHHHHHHCCEEECCCCCEEECCCCEEEECCCHHHHHHHC
Q ss_conf 203566774211322156-----410220214414989999999984045788799977830331559548512687640
Q gi|254780877|r 653 YVGYEEGGALTEAVRRHP-----YQVVLFDEIEKAHSDVHNILLQVLDDGRLTDSQGRTVDFRNTLIIMTSNLGAEYLIE 727 (853)
Q Consensus 653 YvG~~~gg~Lte~vr~~P-----~sVil~DEiEKah~~v~~~llqild~G~ltd~~G~~v~f~n~iii~TsN~G~~~~~~ 727 (853)
T Consensus 70 ~i~~~~i~~~i~~~~~~~~~~~~~Kv~IIdea~~lt~~A~NaLLKtLEEPp-----------~~~~fil~t~~~~----- 133 (303)
T PRK07132 70 DLSKEEFLSAIEKFSFSSFVSNQKKILIIKNIEKTSNSSLNALLKTIEEPS-----------KNTYFLLTTKNIN----- 133 (303)
T ss_pred CHHHHHHHHHHHHHHHCCCCCCCEEEEEEECHHHCCHHHHHHHHHHCCCCC-----------CCEEEEEEECCHH-----
T ss_conf 001688999999997366556870699981655339999999998703898-----------6848999728824-----
Q ss_pred CHHHHHHHHHHHHHHHCCHHHHCCCCCEEECCCCCHHHHHHH
Q ss_conf 326799999999986288577266681586288998999999
Q gi|254780877|r 728 DGDSVHDKVMGIVRSAFKPEFLNRLDEIILFEKLRKEDMAKI 769 (853)
Q Consensus 728 ~~~~~~~~~~~~l~~~f~peflnRid~iv~F~~l~~~~~~~i 769 (853)
T Consensus 134 ---------------~il~TI~SRC-q~~~f~~~~~~~i~~~ 159 (303)
T PRK07132 134 ---------------KVIPTIVSRC-QVINVKEPDQQKILAK 159 (303)
T ss_pred ---------------HCCHHHHHCC-EEEECCCCCHHHHHHH
T ss_conf ---------------3837786366-5663788999999999