HHsearch alignment for GI: 254780877 and conserved domain: PRK07940
>PRK07940 DNA polymerase III subunit delta'; Validated.
Probab=99.23 E-value=2.1e-10 Score=103.54 Aligned_cols=125 Identities=22% Similarity=0.412 Sum_probs=60.9
Q ss_pred HHHCCHHHHHHHHHHHHHHHHCCC----CCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCC
Q ss_conf 674594899999999998741012----3656651289872678616889999999872377653002244774034532
Q gi|254780877|r 568 KSVIGQSAAVESVSNALRRFRAGL----QDPQRPMGSFMFLGPTGVGKTELVKSLARLLFDDENSMIRIDMSEYMEKHSV 643 (853)
Q Consensus 568 ~~v~gq~~ai~~v~~~~~~~~~gl----~~~~~p~~~flf~GptGvGKTelak~la~~lf~~~~~lir~dMsey~e~~~v 643 (853)
T Consensus 5 ~~ivGQe~v~~~L~~A~~~~R~~~~~~~~~~~~~~HAyLF~Gp~G~Gk~~~A~~~A~~l~C~~~~~~--~cg~C---~~C 79 (395)
T PRK07940 5 DRLVGQDAVVAELRAAARAARADSAHSAAAGSGMTHAWLFTGPPGSGRSNAARAFAAALQCTDPGVP--GCGEC---RAC 79 (395)
T ss_pred HHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCC--CCCCC---HHH
T ss_conf 1315929999999999983634344333346876603763689987889999999999669999999--99878---789
Q ss_pred C-HHHCCCCHHC---------CCCCCCCCCHHHHCCC----CCEEEEHHHHHCCHHHHHHHHHHHHCC
Q ss_conf 0-1304771120---------3566774211322156----410220214414989999999984045
Q gi|254780877|r 644 S-RLIGSPPGYV---------GYEEGGALTEAVRRHP----YQVVLFDEIEKAHSDVHNILLQVLDDG 697 (853)
Q Consensus 644 s-~LiGappGYv---------G~~~gg~Lte~vr~~P----~sVil~DEiEKah~~v~~~llqild~G 697 (853)
T Consensus 80 ~~i~~g~hpDv~~i~p~~~~i~id~iR~l~~~~~~~p~~~~~kv~ii~~a~~m~~~a~NalLKtLEEP 147 (395)
T PRK07940 80 RTVLAGTHPDVRVVVPEGLSIGVDEVREIVQIAARRPTTGRWRIVVIEDADRLTERAANALLKAVEEP 147 (395)
T ss_pred HHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECHHHHCHHHHHHHHHHHCCC
T ss_conf 99876899871898268776889999999999852730379559998077874899999999852178