HHsearch alignment for GI: 254780877 and conserved domain: PRK07952
>PRK07952 DNA replication protein DnaC; Validated.
Probab=96.20 E-value=0.019 Score=38.88 Aligned_cols=70 Identities=24% Similarity=0.543 Sum_probs=49.2
Q ss_pred CCEEEECCCCCCHHHHHHHHHHHHHCCCCCHHHCCCEEEEEEHHHHHCCCC--CCCHHHHHHHHHHHHHHHCCCCEEEEE
Q ss_conf 866895288740777999999987348998444574378873135421745--420245458999999860799769996
Q gi|254780877|r 200 NNPVLIGDPGVGKTAIIEGLASRIINGDIPESLKGKRLMALDMGALIAGAK--FRGEFEERLKSLLCEIRSEDGEIILFI 277 (853)
Q Consensus 200 ~n~~lvGe~GvGKtaive~la~~i~~~~vp~~l~~~~i~~ld~~~l~ag~~--~rg~~e~r~~~i~~~~~~~~~~~ilfi 277 (853)
T Consensus 97 ~gLlF~G~~GTGKThLA~aIan~Li~-------~G~sVlf~t~~dLl~~lr~t~-~~~~~~e~~~l~~l~~~d---LLIi 165 (242)
T PRK07952 97 ASFIFSGKPGTGKNHLAAAICNELLL-------RGKSVLIITVADIMSAMKDTF-RNSETSEEQLLNDLSNVD---LLVI 165 (242)
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHHH-------CCCEEEEEEHHHHHHHHHHHH-HCCCCCHHHHHHHHHCCC---EEEE
T ss_conf 71799789999789999999999998-------799499977999999999998-068756999999863189---8987
Q ss_pred CCH
Q ss_conf 362
Q gi|254780877|r 278 DEL 280 (853)
Q Consensus 278 de~ 280 (853)
T Consensus 166 Ddl 168 (242)
T PRK07952 166 DEI 168 (242)
T ss_pred ECC
T ss_conf 301