HHsearch alignment for GI: 254780877 and conserved domain: PRK08058
>PRK08058 DNA polymerase III subunit delta'; Validated.
Probab=98.88 E-value=5.4e-08 Score=83.90 Aligned_cols=182 Identities=16% Similarity=0.205 Sum_probs=101.6
Q ss_pred CCCCCHHHHH-HHHHHHHCCCCCCCE-EEECCCCCCHHHHHHHHHHHHHCCCCCH-HHCC-------------CEEEEEE
Q ss_conf 3333357899-999996336777866-8952887407779999999873489984-4457-------------4378873
Q gi|254780877|r 178 DPVIGRDDEM-RRAIQVLSRRTKNNP-VLIGDPGVGKTAIIEGLASRIINGDIPE-SLKG-------------KRLMALD 241 (853)
Q Consensus 178 DPVIGRe~EI-~~~~~iL~r~~k~n~-~lvGe~GvGKtaive~la~~i~~~~vp~-~l~~-------------~~i~~ld 241 (853)
T Consensus 5 ~~~~~~Q~~i~~~L~~~i~~~rl~HA~Lf~Gp~G~GK~~~A~~~A~~LlC~~~~~~~~Cg~C~~C~~~~~~~HPD~~~i~ 84 (329)
T PRK08058 5 EQLTALQPIVVKMLQNSIAKNRLAHAYLFEGAKGTGKKATALWLAKSLFCLERNGVEPCGTCTNCKRIESGNHPDVHLVA 84 (329)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEEC
T ss_conf 88883189999999999985996615655789998899999999999739999999988788899998769999767745
Q ss_pred HHHHHCCCCCCCHHHHHHHHHHHHHHHCC---CCEEEEECCHHHHCCCCCCCCCCCHHHHHHHHHCCC--CEEEEEEECH
Q ss_conf 13542174542024545899999986079---976999636277302666554335888876531246--6048997448
Q gi|254780877|r 242 MGALIAGAKFRGEFEERLKSLLCEIRSED---GEIILFIDELHVLVGAGKTDGAMDASNLLKPSLARG--ELHCIGATTL 316 (853)
Q Consensus 242 ~~~l~ag~~~rg~~e~r~~~i~~~~~~~~---~~~ilfide~h~~~gaG~~~g~~Daan~LKP~LarG--~l~~IgaTT~ 316 (853)
T Consensus 85 p----~~~~i~---idqiR~L~~~~~~~p~~g~~KV~II~~Ae~m--------~~~AaNALLKtLEEPp~~t~fIL~t~- 148 (329)
T PRK08058 85 P----DGQSIK---KDQIRYLKEEFSKSGVESNKKVYIIEHADKM--------TASAANSLLKFLEEPSGDTTAILLTE- 148 (329)
T ss_pred C----CCCCCC---HHHHHHHHHHHCCCCCCCCCEEEEEECHHHH--------CHHHHHHHHHHHHCCCCCCEEEEEEC-
T ss_conf 6----614077---9999999999643875788679997347762--------99999999998646897867998729-
Q ss_pred HHHHHHHHCCHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
Q ss_conf 99999730011132023111115777678999999978986541496101589999986333202457674778999999
Q gi|254780877|r 317 DEYRKYIEKDPALARRFQSLLVGEPTVTDTISILRGLKERYEQHHKVRISDSALVSAAVLSNRYITDRFLPDKAIDLMDE 396 (853)
Q Consensus 317 ~Eyrk~iEkD~Al~RRFq~i~V~Eps~~~t~~iL~gl~~~yE~~H~V~i~d~al~~av~ls~rYi~~r~lPDKAIDllDe 396 (853)
T Consensus 149 -~~~~lL---pTI~SRCq~i~f~~~~~~~i~~~L~-------~-~~i~--~~~a~l~a~~~g-------s~~~A~~l~~~ 207 (329)
T PRK08058 149 -NKHQIL---PTILSRCQVVEFRPLPPESLIQRLQ-------E-EGIS--ESLATLLAQLTN-------SVEEALALSED 207 (329)
T ss_pred -CHHHHH---HHHHHCCEEEECCCCCHHHHHHHHH-------H-CCCC--HHHHHHHHHHCC-------CHHHHHHHHCC
T ss_conf -966643---6886314256588999999999999-------8-7999--899999998789-------99999988426