HHsearch alignment for GI: 254780877 and conserved domain: PRK08506
>PRK08506 replicative DNA helicase; Provisional.
Probab=96.37 E-value=0.12 Score=32.42 Aligned_cols=81 Identities=19% Similarity=0.351 Sum_probs=47.4
Q ss_pred CHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCEE-EECCCCCCHHHHHHHHHHHHHCCCCCHHHCCCEE
Q ss_conf 107886443569987298533333578999999963367778668-9528874077799999998734899844457437
Q gi|254780877|r 159 DALKKYCRDLTEEARNGKLDPVIGRDDEMRRAIQVLSRRTKNNPV-LIGDPGVGKTAIIEGLASRIINGDIPESLKGKRL 237 (853)
Q Consensus 159 ~~L~ky~~DLTe~Ar~GkLDPVIGRe~EI~~~~~iL~r~~k~n~~-lvGe~GvGKtaive~la~~i~~~~vp~~l~~~~i 237 (853)
T Consensus 153 ~~~~~~~~~i~~~~~~~~~-~~~Gi~TGf~~LD~~t~Gl~~gdLiIIAARPsmGKTAfAlniA~~~a~~~~~-----V~~ 226 (473)
T PRK08506 153 EVIKSTMEHIKKQKRLGNK-DIIGLDTGFKQLNKMTKGFNKGDLIIIAARPSMGKTTLVLNMVLKALNQGKG-----VAF 226 (473)
T ss_pred HHHHHHHHHHHHHHHCCCC-CCCCCCCCHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCC-----EEE
T ss_conf 9999999999999855899-8534778808788872699856279995079986789999999999965996-----589
Q ss_pred EEEEHHHH
Q ss_conf 88731354
Q gi|254780877|r 238 MALDMGAL 245 (853)
Q Consensus 238 ~~ld~~~l 245 (853)
T Consensus 227 FSLEMs~~ 234 (473)
T PRK08506 227 FSLEMPAE 234 (473)
T ss_pred EECCCCHH
T ss_conf 82247999