HHsearch alignment for GI: 254780877 and conserved domain: PRK08691
>PRK08691 DNA polymerase III subunits gamma and tau; Validated.
Probab=99.12 E-value=2.4e-09 Score=94.98 Aligned_cols=203 Identities=22% Similarity=0.268 Sum_probs=134.1
Q ss_pred HHHHHHCCCCCCCCCHHHHHHHHHHHHCCCC-CCCEEEECCCCCCHHHHHHHHHHHHHCCC-C---CH----------HH
Q ss_conf 5699872985333335789999999633677-78668952887407779999999873489-9---84----------44
Q gi|254780877|r 168 LTEEARNGKLDPVIGRDDEMRRAIQVLSRRT-KNNPVLIGDPGVGKTAIIEGLASRIINGD-I---PE----------SL 232 (853)
Q Consensus 168 LTe~Ar~GkLDPVIGRe~EI~~~~~iL~r~~-k~n~~lvGe~GvGKtaive~la~~i~~~~-v---p~----------~l 232 (853)
T Consensus 6 lark~RP~~F~e~vGQ~~v~~~L~nal~~~rl~haylf~G~rGvGKTt~Ari~Ak~lNC~~~~~~~pCg~C~~C~~i~~g 85 (704)
T PRK08691 6 LARKWRPKTFADLVGQEHVVKALQNALDEGRLHHAYLLTGTRGVGKTTIARILAKSLNCENAQHGEPCGVCQSCTQIDAG 85 (704)
T ss_pred HHHHHCCCCHHHHCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCC
T ss_conf 77651887475641869999999999981997523750278987888999999999679999999978777767878558
Q ss_pred CCCEEEEEEHHHHHCCCCCCCHHHHHHHHHHHHHHHCC---CCEEEEECCHHHHCCCCCCCCCCCHHHHHHHHHC--CCC
Q ss_conf 57437887313542174542024545899999986079---9769996362773026665543358888765312--466
Q gi|254780877|r 233 KGKRLMALDMGALIAGAKFRGEFEERLKSLLCEIRSED---GEIILFIDELHVLVGAGKTDGAMDASNLLKPSLA--RGE 307 (853)
Q Consensus 233 ~~~~i~~ld~~~l~ag~~~rg~~e~r~~~i~~~~~~~~---~~~ilfide~h~~~gaG~~~g~~Daan~LKP~La--rG~ 307 (853)
T Consensus 86 ~~~D~~EiDaA------s~~~v--dd~R~l~~~~~y~P~~~~yKVyiiDEvhmLs--------~~afNAlLKtLEEPP~~ 149 (704)
T PRK08691 86 RYVDLLEIDAA------SNTGI--DNIREVLENAQYAPTAGKYKVYIIDEVHMLS--------KSAFNAMLKTLEEPPEH 149 (704)
T ss_pred CCCCEEEEECC------CCCCH--HHHHHHHHHCCCCCCCCCEEEEEEECHHHCC--------HHHHHHHHHHHCCCCCC
T ss_conf 99874774245------44588--9999999853468867853599983154438--------99999999861479756
Q ss_pred EEEEEEECHHHHHHHHHCCH-HHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCC
Q ss_conf 04899744899999730011-13202311111577767899999997898654149610158999998633320245767
Q gi|254780877|r 308 LHCIGATTLDEYRKYIEKDP-ALARRFQSLLVGEPTVTDTISILRGLKERYEQHHKVRISDSALVSAAVLSNRYITDRFL 386 (853)
Q Consensus 308 l~~IgaTT~~Eyrk~iEkD~-Al~RRFq~i~V~Eps~~~t~~iL~gl~~~yE~~H~V~i~d~al~~av~ls~rYi~~r~l 386 (853)
T Consensus 150 v~FilaTTdp~--K----lp~TIlSRC~~f~l~~~~~~~i~~~L~~i~~----~E~i~~e~~al~~ia~~a~Gs~RD--- 216 (704)
T PRK08691 150 VKFILATTDPH--K----VPVTVLSRCLQFVLRNMTAQQVADHLAHVLD----SEKIAYEPPALQLLGRAAAGSMRD--- 216 (704)
T ss_pred EEEEEECCCHH--H----CCHHHHHHHHHHCCCCCCHHHHHHHHHHHHH----HCCCCCCHHHHHHHHHHCCCCHHH---
T ss_conf 08998548846--4----7589998887710268999999999999999----839856899999999975785777---
Q ss_pred HHHHHHHHHHHHHHHH
Q ss_conf 4778999999999875
Q gi|254780877|r 387 PDKAIDLMDEASARVR 402 (853)
Q Consensus 387 PDKAIDllDeA~A~~~ 402 (853)
T Consensus 217 ---alslldQaia~~~ 229 (704)
T PRK08691 217 ---ALSLLDQAIALGS 229 (704)
T ss_pred ---HHHHHHHHHHHCC
T ss_conf ---9889999999648