HHsearch alignment for GI: 254780877 and conserved domain: PRK08853
>PRK08853 DNA polymerase III subunits gamma and tau; Validated.
Probab=99.17 E-value=7.2e-10 Score=99.16 Aligned_cols=203 Identities=22% Similarity=0.220 Sum_probs=141.0
Q ss_pred HHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEE-CCCCCCHHHHHHHHHHHHHCCC---------CCH---HH--
Q ss_conf 56998729853333357899999996336777866895-2887407779999999873489---------984---44--
Q gi|254780877|r 168 LTEEARNGKLDPVIGRDDEMRRAIQVLSRRTKNNPVLI-GDPGVGKTAIIEGLASRIINGD---------IPE---SL-- 232 (853)
Q Consensus 168 LTe~Ar~GkLDPVIGRe~EI~~~~~iL~r~~k~n~~lv-Ge~GvGKtaive~la~~i~~~~---------vp~---~l-- 232 (853)
T Consensus 6 lark~RP~~f~e~vGQ~~v~~~L~nal~~~rl~haylf~G~rGvGKTt~ARi~Ak~lNC~~~~~~~pcg~C~~C~~i~~g 85 (717)
T PRK08853 6 LARKWRPTQFKEVVGQSHVLTALENALAHNRLHHAYLFSGTRGVGKTTIGRLFAKGLNCETGITSTPCGQCATCKEIDEG 85 (717)
T ss_pred HHHHHCCCCHHHHCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCC
T ss_conf 77651798565513859999999999970997405761088988898999999998678999999978887026767447
Q ss_pred CCCEEEEEEHHHHHCCCCCCCHHHHHHHHHHHHHHHCC---CCEEEEECCHHHHCCCCCCCCCCCHHHHHHHHHCC--CC
Q ss_conf 57437887313542174542024545899999986079---97699963627730266655433588887653124--66
Q gi|254780877|r 233 KGKRLMALDMGALIAGAKFRGEFEERLKSLLCEIRSED---GEIILFIDELHVLVGAGKTDGAMDASNLLKPSLAR--GE 307 (853)
Q Consensus 233 ~~~~i~~ld~~~l~ag~~~rg~~e~r~~~i~~~~~~~~---~~~ilfide~h~~~gaG~~~g~~Daan~LKP~Lar--G~ 307 (853)
T Consensus 86 ~~~d~~EiDa------As~~~v--dd~rel~~~~~y~p~~~~yKvyiiDEvHmls--------~~afnAlLKtlEEPP~h 149 (717)
T PRK08853 86 RFVDLLEIDA------ASRTKV--EDTRELLDNVQYKPARGRFKVYLIDEVHMLS--------RHSFNALLKTLEEPPEY 149 (717)
T ss_pred CCCCEEEECC------CCCCCH--HHHHHHHHHCCCCCCCCCEEEEEEECHHHCC--------HHHHHHHHHHHCCCCCC
T ss_conf 8775245405------656788--9999999855548877854799983054438--------99999998760378756
Q ss_pred EEEEEEECHHHHHHHHHCCHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCH
Q ss_conf 04899744899999730011132023111115777678999999978986541496101589999986333202457674
Q gi|254780877|r 308 LHCIGATTLDEYRKYIEKDPALARRFQSLLVGEPTVTDTISILRGLKERYEQHHKVRISDSALVSAAVLSNRYITDRFLP 387 (853)
Q Consensus 308 l~~IgaTT~~Eyrk~iEkD~Al~RRFq~i~V~Eps~~~t~~iL~gl~~~yE~~H~V~i~d~al~~av~ls~rYi~~r~lP 387 (853)
T Consensus 150 v~FilaTT~~--~k-ip-~-TilSRc~~f~l~~~~~~~i~~~l~~i~~~----E~i~~~~~al~~ia~~a~Gs~Rd---- 216 (717)
T PRK08853 150 VKFLLATTDP--QK-LP-V-TILSRCLQFHLKPISVDQIHQQLDFVLDK----EQVSAEARALGLIAHAADGSMRD---- 216 (717)
T ss_pred EEEEEECCCH--HH-CC-H-HHHHHHHHCCCCCCCHHHHHHHHHHHHHH----CCCCCCHHHHHHHHHHCCCCHHH----
T ss_conf 4899843873--43-73-8-89876544232689999999999999997----59876999999999976883778----
Q ss_pred HHHHHHHHHHHHHH
Q ss_conf 77899999999987
Q gi|254780877|r 388 DKAIDLMDEASARV 401 (853)
Q Consensus 388 DKAIDllDeA~A~~ 401 (853)
T Consensus 217 --alsl~dqaia~~ 228 (717)
T PRK08853 217 --ALSLTDQAIALG 228 (717)
T ss_pred --HHHHHHHHHHHC
T ss_conf --888999999965