HHsearch alignment for GI: 254780877 and conserved domain: PRK09087
>PRK09087 hypothetical protein; Validated.
Probab=98.00 E-value=8.3e-05 Score=58.01 Aligned_cols=170 Identities=21% Similarity=0.326 Sum_probs=95.5
Q ss_pred CCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCHHHCCCCHHCCCCCCCCCCHHHHCCCCCE
Q ss_conf 56651289872678616889999999872377653002244774034532013047711203566774211322156410
Q gi|254780877|r 594 PQRPMGSFMFLGPTGVGKTELVKSLARLLFDDENSMIRIDMSEYMEKHSVSRLIGSPPGYVGYEEGGALTEAVRRHPYQV 673 (853)
Q Consensus 594 ~~~p~~~flf~GptGvGKTelak~la~~lf~~~~~lir~dMsey~e~~~vs~LiGappGYvG~~~gg~Lte~vr~~P~sV 673 (853)
T Consensus 40 ~~w~~~~~~L~Gp~gsGKTHL~~~~~~~~----~a-~~~~~~~~~~------------------------~~~~~~~~~~ 90 (226)
T PRK09087 40 PNWPSPVVVLAGPVGSGKTHLASIWREKA----DA-LLVHPNEIGS------------------------DAANAAAERP 90 (226)
T ss_pred CCCCCCEEEEECCCCCCHHHHHHHHHHHH----CC-EEECHHHCCH------------------------HHHHHHCCCC
T ss_conf 26777758998999998869999999980----99-6836687474------------------------6676532798
Q ss_pred EEEHHHHHCCHHHHHHHHHHHHCCEEECCCCCEEECCCCEEEECCCHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHCCCC
Q ss_conf 22021441498999999998404578879997783033155954851268764032679999999998628857726668
Q gi|254780877|r 674 VLFDEIEKAHSDVHNILLQVLDDGRLTDSQGRTVDFRNTLIIMTSNLGAEYLIEDGDSVHDKVMGIVRSAFKPEFLNRLD 753 (853)
Q Consensus 674 il~DEiEKah~~v~~~llqild~G~ltd~~G~~v~f~n~iii~TsN~G~~~~~~~~~~~~~~~~~~l~~~f~peflnRid 753 (853)
T Consensus 91 ~~idd~d~~~~d-Ee~LFhl~N----------~~~~~~~~LLlts~~~p~~l~~----------------~L~DL~SRL~ 143 (226)
T PRK09087 91 VLIEDIDAGGFD-ETGLFHLIN----------SVRQAGTSLLMTSRLWPSAWNV----------------KLPDLKSRLK 143 (226)
T ss_pred EEEECCCCCCCC-HHHHHHHHH----------HHHHCCCEEEEECCCCHHHCCC----------------CCHHHHHHHH
T ss_conf 899748777747-899999999----------9985398799988989566676----------------2468999985
Q ss_pred --CEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHCCCCCCCCCHHHHHHHH----------HHHH
Q ss_conf --1586288998999999999999999999857989999889999999708982206215799999----------8733
Q gi|254780877|r 754 --EIILFEKLRKEDMAKIVRIQLGRVLSLIKERNISMDFDDQVIDWLSCRGYDPSYGARPLKRVIQ----------RYIQ 821 (853)
Q Consensus 754 --~iv~F~~l~~~~~~~i~~~~l~~l~~~l~~~~i~l~~~~~~~~~l~~~~~~~~~GaR~l~r~i~----------~~i~ 821 (853)
T Consensus 144 ~~~~~~I~~pdD~ll~~~L~k-------~~~~r~--l~l~~~v~~yll~r~-~Rs~--~~l~~~l~~LD~~SL~~kr~IT 211 (226)
T PRK09087 144 AATVVEIGEPDDALLSGVIFK-------LFADRQ--LYVEPHVVYYLVSRM-ERSL--FAAQTIVERLDRLALERKSRIT 211 (226)
T ss_pred CCEEEEECCCCHHHHHHHHHH-------HHHHCC--CCCCHHHHHHHHHHC-CCCH--HHHHHHHHHHHHHHHHCCCCCC
T ss_conf 785798359998999999999-------987576--578888999999845-8899--9999999999999998189998
Q ss_pred HHHHHHHHCC
Q ss_conf 4999999708
Q gi|254780877|r 822 NPLAERVLSQ 831 (853)
Q Consensus 822 ~~la~~il~~ 831 (853)
T Consensus 212 iplikevL~~ 221 (226)
T PRK09087 212 RALAAEVLNE 221 (226)
T ss_pred HHHHHHHHHH
T ss_conf 9999999985