HHsearch alignment for GI: 254780877 and conserved domain: PRK09183

Probab=98.21  E-value=4.7e-06  Score=68.15  Aligned_cols=117  Identities=22%  Similarity=0.328  Sum_probs=75.3

Q ss_pred             EEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCHHHCCCCHHCCCCCCCCCCHHHHC--CCCCEEEEH
Q ss_conf             898726786168899999998723776530022447740345320130477112035667742113221--564102202
Q gi|254780877|r  600 SFMFLGPTGVGKTELVKSLARLLFDDENSMIRIDMSEYMEKHSVSRLIGSPPGYVGYEEGGALTEAVRR--HPYQVVLFD  677 (853)
Q Consensus       600 ~flf~GptGvGKTelak~la~~lf~~~~~lir~dMsey~e~~~vs~LiGappGYvG~~~gg~Lte~vr~--~P~sVil~D  677 (853)
T Consensus       103 Nvil~G~~GtGKThLA~Alg~~A~~~G~~v~f~~~~~L~~~L~~a~~~~------------~~~~~l~r~l~~~dLLIiD  170 (258)
T PRK09183        103 NIVLLGPSGVGKTHLAIALGYEAVRAGIKVRFTTAADLLLQLSTAQRQG------------RYKTTLQRGVMAPRLLIID  170 (258)
T ss_pred             CEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHCC------------CHHHHHHHHHCCCCEEEEH
T ss_conf             6799899998689999999999998799399978999999999998768------------5999999874346514431


Q ss_pred             HH--HHCCHHHHHHHHHHHHCCEEECCCCCEEECCCCEEEECCCHHHHHHHC-C-HH-HHHHHHHHH
Q ss_conf             14--414989999999984045788799977830331559548512687640-3-26-799999999
Q gi|254780877|r  678 EI--EKAHSDVHNILLQVLDDGRLTDSQGRTVDFRNTLIIMTSNLGAEYLIE-D-GD-SVHDKVMGI  739 (853)
Q Consensus       678 Ei--EKah~~v~~~llqild~G~ltd~~G~~v~f~n~iii~TsN~G~~~~~~-~-~~-~~~~~~~~~  739 (853)
T Consensus       171 dlG~~~~~~~~~~~lfeli~~Ry-----e~-----~S-~IiTSn~~~~~W~~~f~~D~~la~AilDR  226 (258)
T PRK09183        171 EIGYLPFSQEEANLFFQVIAKRY-----EK-----GA-MILTSNLPFGQWDQTFAGDAALTSAMLDR  226 (258)
T ss_pred             HHHCCCCCHHHHHHHHHHHHHHH-----CC-----CC-EEEECCCCHHHHHHHCCCCHHHHHHHHHH
T ss_conf             33154688889999999999985-----76-----77-89988999789856516869999999998