HHsearch alignment for GI: 254780877 and conserved domain: PRK10490
>PRK10490 sensor protein KdpD; Provisional.
Probab=96.17 E-value=0.15 Score=31.65 Aligned_cols=89 Identities=15% Similarity=0.146 Sum_probs=47.3
Q ss_pred CCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 66681586288998999999999999999999857989999889999999708982206215799999873349999997
Q gi|254780877|r 750 NRLDEIILFEKLRKEDMAKIVRIQLGRVLSLIKERNISMDFDDQVIDWLSCRGYDPSYGARPLKRVIQRYIQNPLAERVL 829 (853)
Q Consensus 750 nRid~iv~F~~l~~~~~~~i~~~~l~~l~~~l~~~~i~l~~~~~~~~~l~~~~~~~~~GaR~l~r~i~~~i~~~la~~il 829 (853)
T Consensus 725 sRle~G~l~l~~~~~~l~evv~~al~~~~~~~~~~~i~v~~~~~~~~v--------~~D~~----lleQVL~NLl~NAiK 792 (895)
T PRK10490 725 ARIQSGGFNLKKEWLTLEEVVGSALQMLEPGLSQHPINLSLPEPLTLI--------HVDGP----LFERVLINLLENAVK 792 (895)
T ss_pred HHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEE--------EECHH----HHHHHHHHHHHHHHH
T ss_conf 876369976646420699999999999986612696799956987069--------87899----999999999999998
Q ss_pred CCCCCCCCEEEEEE--ECCEEEEEE
Q ss_conf 08688978899999--899489897
Q gi|254780877|r 830 SQTISDGDSIEVFV--DDDNLNFRV 852 (853)
Q Consensus 830 ~~~~~~g~~i~i~~--~~~~~~~~~ 852 (853)
T Consensus 793 yt--p~~~~I~v~a~~~~~~v~i~V 815 (895)
T PRK10490 793 YA--GAQAEIGIDAHVEGENLQLDV 815 (895)
T ss_pred HC--CCCCEEEEEEEEECCEEEEEE
T ss_conf 58--999709999999799999999