HHsearch alignment for GI: 254780877 and conserved domain: PRK12422
>PRK12422 chromosomal replication initiation protein; Provisional.
Probab=98.57 E-value=7.3e-05 Score=58.50 Aligned_cols=172 Identities=20% Similarity=0.357 Sum_probs=106.3
Q ss_pred CCCCHHHHHHH-HHHHHCCCC------CCCEEE-ECCCCCCHHHHHHHHHHHHHCCCCCHHHCCCEEEEEEHHH----HH
Q ss_conf 33335789999-999633677------786689-5288740777999999987348998444574378873135----42
Q gi|254780877|r 179 PVIGRDDEMRR-AIQVLSRRT------KNNPVL-IGDPGVGKTAIIEGLASRIINGDIPESLKGKRLMALDMGA----LI 246 (853)
Q Consensus 179 PVIGRe~EI~~-~~~iL~r~~------k~n~~l-vGe~GvGKtaive~la~~i~~~~vp~~l~~~~i~~ld~~~----l~ 246 (853)
T Consensus 113 FVvG~~N~lA~~aa~~va~~~~~~~g~~yNPLfIyG~~GlGKTHLL~AIgn~i~~---~----~~kV~Yvtae~F~~~~v 185 (455)
T PRK12422 113 FLVTPENDLPFRILQEFAKVSEQGKGFPFNPIYLFGPEGSGKTHLMQAAVSALRE---S----GGKILYVSSELFTEHLV 185 (455)
T ss_pred EEECCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHC---C----CCEEEEECHHHHHHHHH
T ss_conf 3315860999999999983755358876787588789999789999999998537---9----98699974999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCHHHHCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEE-CHHHHHHHHHC
Q ss_conf 17454202454589999998607997699963627730266655433588887653124660489974-48999997300
Q gi|254780877|r 247 AGAKFRGEFEERLKSLLCEIRSEDGEIILFIDELHVLVGAGKTDGAMDASNLLKPSLARGELHCIGAT-TLDEYRKYIEK 325 (853)
Q Consensus 247 ag~~~rg~~e~r~~~i~~~~~~~~~~~ilfide~h~~~gaG~~~g~~Daan~LKP~LarG~l~~IgaT-T~~Eyrk~iEk 325 (853)
T Consensus 186 ~ai~-~~~----~~~Fr~~yr~~---DvLLIDDIQfl~gK~~t--qeEff~tfN~L~~~~KQIVitsDr~P~el~~-l-- 252 (455)
T PRK12422 186 SAIR-SGE----MQRFRSFYRNV---DALFIEDIEVFSGKGAT--QEEFFHTFNSLHTEGKLIVISSSYAPGDLKA-M-- 252 (455)
T ss_pred HHHH-CCC----HHHHHHHHHCC---CEEEEEHHHHHHCCHHH--HHHHHHHHHHHHHCCCEEEEECCCCHHHHHH-H--
T ss_conf 9997-588----99999999638---87763147887284889--9999999999998599699968989576512-6--
Q ss_pred CHHHHHCCC---EEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
Q ss_conf 111320231---1111577767899999997898654149610158999998
Q gi|254780877|r 326 DPALARRFQ---SLLVGEPTVTDTISILRGLKERYEQHHKVRISDSALVSAA 374 (853)
Q Consensus 326 D~Al~RRFq---~i~V~Eps~~~t~~iL~gl~~~yE~~H~V~i~d~al~~av 374 (853)
T Consensus 253 ~~RL~SRf~~GL~v~I~~Pd~etr~~Il~~k~~----~~~~~l~~ev~~~iA 300 (455)
T PRK12422 253 EERLISRFEWGIAIPIHPLTREGLRSFLMRQAE----QLSIRIEETALDFLI 300 (455)
T ss_pred HHHHHHHHHCCEEECCCCCCHHHHHHHHHHHHH----HCCCCCCHHHHHHHH
T ss_conf 899998863761321689998999999999998----718888446899999