HHsearch alignment for GI: 254780877 and conserved domain: TIGR02442

>TIGR02442 Cob-chelat-sub cobaltochelatase subunit; InterPro: IPR012804 Cobalamin (vitamin B12) can be complexed with metal via ATP-dependent reactions (aerobic pathway) (e.g., in Pseudomonas denitrificans) or via ATP-independent reactions (anaerobic pathway) (e.g., in Salmonella typhimurium) , . The corresponding cobalt chelatases are not homologous. Cobaltochelatase is responsible for the insertion of cobalt into the corrin ring of coenzyme B12 during its biosynthesis. Two versions have been well described. CbiK/CbiX is a monomeric, anaerobic version which acts early in the biosynthesis (IPR010388 from INTERPRO). CobNST is a trimeric, ATP-dependent, aerobic version which acts late in the biosynthesis, (IPR011953 from INTERPRO, IPR006537 from INTERPRO, IPR006538 from INTERPRO) . The two pathways differ in the point of cobalt insertion during corrin ring formation . There are apparently a number of variations on these two pathways, where the major differences seem to be concerned with the process of ring contraction . Cobaltochelatase shows similarities with magnesium chelatase, which is also a complex ATP-dependent enzyme made up of two separable components. However, unlike the situation in cobaltochelatase, one of these two components is membrane bound in magnesium chelatase . .
Probab=97.65  E-value=0.0054  Score=43.27  Aligned_cols=207  Identities=21%  Similarity=0.350  Sum_probs=123.9

Q ss_pred             CCCHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHH-----HCC---C----------------------CC
Q ss_conf             33357899999996336777866895288740777999999987-----348---9----------------------98
Q gi|254780877|r  180 VIGRDDEMRRAIQVLSRRTKNNPVLIGDPGVGKTAIIEGLASRI-----ING---D----------------------IP  229 (853)
Q Consensus       180 VIGRe~EI~~~~~iL~r~~k~n~~lvGe~GvGKtaive~la~~i-----~~~---~----------------------vp  229 (853)
T Consensus         6 iVGQe~LK~ALLL~Av~P~iGGVLirG~KGTAKSTaaR~L~~LLP~i~~v~gC~f~cdP~~P~~~C~~C~~~~~~~G~~~   85 (688)
T TIGR02442         6 IVGQEDLKLALLLNAVNPRIGGVLIRGEKGTAKSTAARGLAALLPDIDVVAGCPFSCDPDDPEEWCEECRRKLEEQGTLP   85 (688)
T ss_pred             CCCHHHHHHHHHHEEECCCCCEEEEECCCCCHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCCC
T ss_conf             21427986532100252663707887788862789888487616023664047888777887040067675552047753


Q ss_pred             HHHCCCEEEEEEHHH---HHCCCCCCCHHHHHHH--------HHHHHHHHCCCCEEEEECCHHHHCCCCCCCCCCCHHHH
Q ss_conf             444574378873135---4217454202454589--------99999860799769996362773026665543358888
Q gi|254780877|r  230 ESLKGKRLMALDMGA---LIAGAKFRGEFEERLK--------SLLCEIRSEDGEIILFIDELHVLVGAGKTDGAMDASNL  298 (853)
Q Consensus       230 ~~l~~~~i~~ld~~~---l~ag~~~rg~~e~r~~--------~i~~~~~~~~~~~ilfide~h~~~gaG~~~g~~Daan~  298 (853)
T Consensus        86 ~~~~~~~~V~LPlgATEDRVvG~L---Di~~al~~G~~~FqPGLLA~A--hrG--iLYiDEVNLL-d-------DhlVD~  150 (688)
T TIGR02442        86 SEQRPVPFVNLPLGATEDRVVGSL---DIERALKEGEKAFQPGLLAEA--HRG--ILYIDEVNLL-D-------DHLVDV  150 (688)
T ss_pred             CCCCCCEEEECCCCCCHHHHCCHH---HHHHHHHHCHHHHCCCCHHHH--CCC--EEEEEEECCC-C-------CHHHHH
T ss_conf             135873588658775233221305---489998718566078861754--687--1678520014-4-------147789


Q ss_pred             HHHHHCCCCE---------------EEEEEECHHHHHHHHHCCHHHHHCCC-EEECCCCC-HHHHHHHHHHHHHHH----
Q ss_conf             7653124660---------------48997448999997300111320231-11115777-678999999978986----
Q gi|254780877|r  299 LKPSLARGEL---------------HCIGATTLDEYRKYIEKDPALARRFQ-SLLVGEPT-VTDTISILRGLKERY----  357 (853)
Q Consensus       299 LKP~LarG~l---------------~~IgaTT~~Eyrk~iEkD~Al~RRFq-~i~V~Eps-~~~t~~iL~gl~~~y----  357 (853)
T Consensus       151 lLDaaA~G~n~VEREG~S~~Hparf~L~GTMNPEEG----~LRPQLLDRFGL~V~v~~~~d~~~R~Ev~~Rrl-~~d~dP  225 (688)
T TIGR02442       151 LLDAAAMGVNRVEREGLSVSHPARFVLIGTMNPEEG----DLRPQLLDRFGLCVDVAASRDPEERVEVIRRRL-AFDADP  225 (688)
T ss_pred             HHHHHHCCCEEEEECCCCHHCHHHHHHHCCCCCCHH----HHCHHHHHHHHCEEEECCCCCHHHHHHHHHHHH-HHCCCC
T ss_conf             999876480067635743001145532203785221----102232424401155024358668999999997-540267


Q ss_pred             HHH-CCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHC
Q ss_conf             541-4961015899999863332024576747789999999998754102
Q gi|254780877|r  358 EQH-HKVRISDSALVSAAVLSNRYITDRFLPDKAIDLMDEASARVRMQID  406 (853)
Q Consensus       358 E~~-H~V~i~d~al~~av~ls~rYi~~r~lPDKAIDllDeA~A~~~i~~~  406 (853)
T Consensus       226 ~~F~~~~~~~~~~L~~~I~~AR~lLp~V~l~d~~~~~I~~lc~~~~V~Gh  275 (688)
T TIGR02442       226 EAFAARWAAEQEELRERIAAARSLLPSVRLSDSLLRFISELCIEFGVDGH  275 (688)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCC
T ss_conf             78899999999999999999997547765888999999999997288852