HHsearch alignment for GI: 254780877 and conserved domain: TIGR02928
>TIGR02928 TIGR02928 orc1/cdc6 family replication initiation protein; InterPro: IPR014277 This set of DNA binding proteins shows homology to the origin recognition complex subunit 1/cell division control protein 6 family in eukaryotes. The proteins in this entry are found exclusively in the archaea. Several members may be found in a genome and interact with each other..
Probab=98.76 E-value=5.8e-08 Score=83.67 Aligned_cols=219 Identities=20% Similarity=0.288 Sum_probs=141.5
Q ss_pred HHH--HHCCHHHHHHHHHHHHHHHHC-CCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHH------CCCC-CCCCCCCHH
Q ss_conf 776--745948999999999987410-123656651289872678616889999999872------3776-530022447
Q gi|254780877|r 566 ISK--SVIGQSAAVESVSNALRRFRA-GLQDPQRPMGSFMFLGPTGVGKTELVKSLARLL------FDDE-NSMIRIDMS 635 (853)
Q Consensus 566 l~~--~v~gq~~ai~~v~~~~~~~~~-gl~~~~~p~~~flf~GptGvGKTelak~la~~l------f~~~-~~lir~dMs 635 (853)
T Consensus 13 ~Pden~i~hRdeqI~~l~~~L~~~l~PG~~----P~-Ni~iYGkTGtGKT~vt~~v~~~l~~~~~~~d~~D~~~~~~NC~ 87 (383)
T TIGR02928 13 VPDENRIVHRDEQIEELAKALRPILRPGSR----PS-NIFIYGKTGTGKTAVTKYVMKELEEAAEDRDVRDVSTVYINCQ 87 (383)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHCCCCC----CC-CEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCC
T ss_conf 027424668678999999998875067489----87-2588788898788999999999999862269971589997785
Q ss_pred HHCCCCCC-----CHH----HCCCCHHCCCCCC---CCCCHHHH-C-CCCCEEEEHHHHHC---CHH---HHHHHHHHHH
Q ss_conf 74034532-----013----0477112035667---74211322-1-56410220214414---989---9999999840
Q gi|254780877|r 636 EYMEKHSV-----SRL----IGSPPGYVGYEEG---GALTEAVR-R-HPYQVVLFDEIEKA---HSD---VHNILLQVLD 695 (853)
Q Consensus 636 ey~e~~~v-----s~L----iGappGYvG~~~g---g~Lte~vr-~-~P~sVil~DEiEKa---h~~---v~~~llqild 695 (853)
T Consensus 88 ~~~T~y~~~~~L~~~ln~~~~~~~vP~tG~s~~~~~~~l~~~l~~~~~~~~~ivLDEiD~Lv~~~~d~PAyS~~LY~L~R 167 (383)
T TIGR02928 88 ILDTSYQVLVELANQLNRRGSGEEVPTTGLSTSEVFRELYKELNRERGDSLIIVLDEIDKLVRKDDDDPAYSKLLYQLSR 167 (383)
T ss_pred CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHCCCCCCHHHHHHHHHHHH
T ss_conf 46846999999999851577888898877878999999999983201887999862310221588888078788534331
Q ss_pred CCEEECCCCCEEE-CCCCEEEECCCHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHCCCCCEEECCCCCHHHHHHHHHHHH
Q ss_conf 4578879997783-033155954851268764032679999999998628857726668158628899899999999999
Q gi|254780877|r 696 DGRLTDSQGRTVD-FRNTLIIMTSNLGAEYLIEDGDSVHDKVMGIVRSAFKPEFLNRLDEIILFEKLRKEDMAKIVRIQL 774 (853)
Q Consensus 696 ~G~ltd~~G~~v~-f~n~iii~TsN~G~~~~~~~~~~~~~~~~~~l~~~f~peflnRid~iv~F~~l~~~~~~~i~~~~l 774 (853)
T Consensus 168 a~~----~~-~~~~~~vgvIgISND----------~~f~~~Ld~RVkSsL~~-------eei~FpPYdA~eL~~IL~~R- 224 (383)
T TIGR02928 168 ARE----NG-DLENAKVGVIGISND----------LKFRENLDPRVKSSLCE-------EEIVFPPYDAEELRDILENR- 224 (383)
T ss_pred HHH----CC-CCCCCCEEEEEEECC----------CHHHHHCCCCEECCCCC-------CCCEECCCCHHHHHHHHHHH-
T ss_conf 000----35-778853489998657----------14364457530132487-------40040798869999999720-
Q ss_pred HHHHHHH-HHCCCEEEECHHHHHHHHHCCCCCCCCCHHHHHHHHH
Q ss_conf 9999999-8579899998899999997089822062157999998
Q gi|254780877|r 775 GRVLSLI-KERNISMDFDDQVIDWLSCRGYDPSYGARPLKRVIQR 818 (853)
Q Consensus 775 ~~l~~~l-~~~~i~l~~~~~~~~~l~~~~~~~~~GaR~l~r~i~~ 818 (853)
T Consensus 225 ------~v~~AF~dGvl~d~VI~lcAA~aAq~hGDAR~AiDLLR~ 263 (383)
T TIGR02928 225 ------AVEKAFYDGVLDDGVIPLCAALAAQEHGDARKAIDLLRV 263 (383)
T ss_pred ------HHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHH
T ss_conf ------312033688546227999999862067878999999998