HHsearch alignment for GI: 254780877 and conserved domain: TIGR03499

Probab=97.76  E-value=0.0011  Score=49.00  Aligned_cols=77  Identities=27%  Similarity=0.492  Sum_probs=43.0

Q ss_pred             EEEEEECCCCHHHHHHHHHHHH-HH--CCCC-CCCCCCCHH---HHCCCCCCCHHHCCCCHHCCCCCCCCCCHHHHC-CC
Q ss_conf             2898726786168899999998-72--3776-530022447---740345320130477112035667742113221-56
Q gi|254780877|r  599 GSFMFLGPTGVGKTELVKSLAR-LL--FDDE-NSMIRIDMS---EYMEKHSVSRLIGSPPGYVGYEEGGALTEAVRR-HP  670 (853)
Q Consensus       599 ~~flf~GptGvGKTelak~la~-~l--f~~~-~~lir~dMs---ey~e~~~vs~LiGappGYvG~~~gg~Lte~vr~-~P  670 (853)
T Consensus       195 ~vi~lvGPTGVGKTTTiAKLAa~~~l~~~~~~V~lIT~DtyRigA~eQLk~ya~il~vp-~~vv~~~-~~l~~~l~~~~~  272 (282)
T TIGR03499       195 GVIALVGPTGVGKTTTLAKLAARFVLEHGKKKVALITTDTYRIGAVEQLKTYAKILGVP-VKVARDP-KELAKALERLRD  272 (282)
T ss_pred             CEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCE-EEEECCH-HHHHHHHHHCCC
T ss_conf             27999778887578899999999999738996799980777678999999999995974-8993999-999999986579


Q ss_pred             CCEEEEH
Q ss_conf             4102202
Q gi|254780877|r  671 YQVVLFD  677 (853)
Q Consensus       671 ~sVil~D  677 (853)
T Consensus       273 ~d~IlID  279 (282)
T TIGR03499       273 KDLILID  279 (282)
T ss_pred             CCEEEEE
T ss_conf             8999981