HHsearch alignment for GI: 254780877 and conserved domain: cd01124

>cd01124 KaiC KaiC is a circadian clock protein primarily found in cyanobacteria KaiC is a RecA-like ATPase, having both Walker A and Walker B motifs. A related protein is found in archaea.
Probab=95.62  E-value=0.13  Score=31.99  Aligned_cols=24  Identities=29%  Similarity=0.426  Sum_probs=14.1

Q ss_pred             EEEECCCCCCHHHHHHHHHHHHHC
Q ss_conf             689528874077799999998734
Q gi|254780877|r  202 PVLIGDPGVGKTAIIEGLASRIIN  225 (853)
Q Consensus       202 ~~lvGe~GvGKtaive~la~~i~~  225 (853)
T Consensus         2 tLi~G~pGsGKT~~a~qfl~~~a~   25 (187)
T cd01124           2 TLLSGGPGTGKTTFALQFLYAGLA   25 (187)
T ss_pred             EEEEECCCCCHHHHHHHHHHHHHH
T ss_conf             158768999999999999999987