HHsearch alignment for GI: 254780877 and conserved domain: pfam00004
>pfam00004 AAA ATPase family associated with various cellular activities (AAA). AAA family proteins often perform chaperone-like functions that assist in the assembly, operation, or disassembly of protein complexes.
Probab=99.15 E-value=4.8e-10 Score=100.60 Aligned_cols=118 Identities=31% Similarity=0.555 Sum_probs=86.6
Q ss_pred EEEECCCCCCHHHHHHHHHHHHHCCCCCHHHCCCEEEEEEHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCHH
Q ss_conf 68952887407779999999873489984445743788731354217454202454589999998607997699963627
Q gi|254780877|r 202 PVLIGDPGVGKTAIIEGLASRIINGDIPESLKGKRLMALDMGALIAGAKFRGEFEERLKSLLCEIRSEDGEIILFIDELH 281 (853)
Q Consensus 202 ~~lvGe~GvGKtaive~la~~i~~~~vp~~l~~~~i~~ld~~~l~ag~~~rg~~e~r~~~i~~~~~~~~~~~ilfide~h 281 (853)
T Consensus 1 iLl~GppGtGKT~~a~~la~~~----------~~~~~~v~~~~~~--~~~~g~~~~~i~~~f~~a~~~-~p~Il~iDe~d 67 (131)
T pfam00004 1 LLLYGPPGTGKTTLAKAVAKEL----------GAPFIEISGSELV--SKYVGESEKRLRELFEAAKKL-APCVIFIDEID 67 (131)
T ss_pred CEEECCCCCCHHHHHHHHHHHH----------CCCCEECCCCCCC--CCCCCHHHHHHHHHHHHHHHC-CCCEEEECHHH
T ss_conf 9878999999999999999997----------8985332420122--233450688899999999974-99189831167
Q ss_pred HHCCCCCCCCC---CCHHHHHHHHHCC-----CCEEEEEEECHHHHHHHHHCCHHHHH-CCCEEE
Q ss_conf 73026665543---3588887653124-----66048997448999997300111320-231111
Q gi|254780877|r 282 VLVGAGKTDGA---MDASNLLKPSLAR-----GELHCIGATTLDEYRKYIEKDPALAR-RFQSLL 337 (853)
Q Consensus 282 ~~~gaG~~~g~---~Daan~LKP~Lar-----G~l~~IgaTT~~Eyrk~iEkD~Al~R-RFq~i~ 337 (853)
T Consensus 68 ~l~~~~~~~~~~~~~~~~~~ll~~ld~~~~~~~~v~~I~tTN~~---~~l--d~al~r~Rfd~~i 127 (131)
T pfam00004 68 ALAGSRGSGGDSESRRVVNQLLTELDGFTSSLSKVIVIAATNRP---DKL--DPALLRGRFDRII 127 (131)
T ss_pred HHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCH---HHC--CHHHHCCCCEEEE
T ss_conf 77516788888751326878999985022468876999975990---449--9779628332899