HHsearch alignment for GI: 254780877 and conserved domain: pfam00931

Probab=97.40  E-value=0.013  Score=40.28  Aligned_cols=150  Identities=13%  Similarity=0.089  Sum_probs=82.1

Q ss_pred             HHHHHHHHHHHHCCCCCC--CEEEECCCCCCHHHHHHHHHHHHHCCCCCHHHCCCEEEEEEHHH--------------HH
Q ss_conf             578999999963367778--66895288740777999999987348998444574378873135--------------42
Q gi|254780877|r  183 RDDEMRRAIQVLSRRTKN--NPVLIGDPGVGKTAIIEGLASRIINGDIPESLKGKRLMALDMGA--------------LI  246 (853)
Q Consensus       183 Re~EI~~~~~iL~r~~k~--n~~lvGe~GvGKtaive~la~~i~~~~vp~~l~~~~i~~ld~~~--------------l~  246 (853)
T Consensus         1 r~~~~~~i~~~L~~~~~~~~vI~I~G~gGiGKTtLA~~v~~~~---~i~~~F-~~~~wv-~vs~~~~~~~i~~~i~~~l~   75 (285)
T pfam00931         1 REDMIEALIEKLLEMSENLGVVGIVGMGGVGKTTLAKQIYNDD---SVGGHF-DSVAWV-VVSKTYTEFRLQKDILQELG   75 (285)
T ss_pred             CHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHCCH---HHHHCC-CEEEEE-EECCCCCHHHHHHHHHHHHC
T ss_conf             9689999999986489895399988999563999999997165---565059-838999-97976668999999999856


Q ss_pred             C--CCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCHHHHCCCCCCCCCCCHHHHHHHHHCCC-CEEEEEEECHHHHHHHH
Q ss_conf             1--74542024545899999986079976999636277302666554335888876531246-60489974489999973
Q gi|254780877|r  247 A--GAKFRGEFEERLKSLLCEIRSEDGEIILFIDELHVLVGAGKTDGAMDASNLLKPSLARG-ELHCIGATTLDEYRKYI  323 (853)
Q Consensus       247 a--g~~~rg~~e~r~~~i~~~~~~~~~~~ilfide~h~~~gaG~~~g~~Daan~LKP~LarG-~l~~IgaTT~~Eyrk~i  323 (853)
T Consensus        76 ~~~~~~~~~~~~~l~~~l~~~L~--~kr~LiVLDDVw~~---------~~~~~l~~~~~~~~~gSrIIvTTR~~~V~~~~  144 (285)
T pfam00931        76 LDDSDWVEKNESELAVKIKEALL--RKRFLLVLDDVWEK---------NDWDKIGVPFPDGENGSRVIVTTRSESVAGRM  144 (285)
T ss_pred             CCCCCCCCCCHHHHHHHHHHHHC--CCCEEEEECCCCCH---------HHHHHHHCCCCCCCCCCEEEEECCCHHHHHHC
T ss_conf             66545555789999999999972--79669996388878---------99999734575789982799855758999873


Q ss_pred             HCCHHHHHCCCEEECCCCCHHHHHHHHHHHH
Q ss_conf             0011132023111115777678999999978
Q gi|254780877|r  324 EKDPALARRFQSLLVGEPTVTDTISILRGLK  354 (853)
Q Consensus       324 EkD~Al~RRFq~i~V~Eps~~~t~~iL~gl~  354 (853)
T Consensus       145 ------~~~~~~~~l~~L~~~es~~Lf~~~a  169 (285)
T pfam00931       145 ------GGTSKPHEVESLEPEESWELFSNKV  169 (285)
T ss_pred             ------CCCCCEEECCCCCHHHHHHHHHHHH
T ss_conf             ------7888347616898799999999984