HHsearch alignment for GI: 254780877 and conserved domain: pfam03969
>pfam03969 AFG1_ATPase AFG1-like ATPase. This family of proteins contains a P-loop motif and are predicted to be ATPases.
Probab=96.85 E-value=0.0087 Score=41.62 Aligned_cols=95 Identities=22% Similarity=0.360 Sum_probs=54.8
Q ss_pred CEEEECCCCCCHHHHHHHHHHHHHCCCCCHHHCCCEE----EEEEHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCEEEE
Q ss_conf 6689528874077799999998734899844457437----887313542174542024545899999986079976999
Q gi|254780877|r 201 NPVLIGDPGVGKTAIIEGLASRIINGDIPESLKGKRL----MALDMGALIAGAKFRGEFEERLKSLLCEIRSEDGEIILF 276 (853)
Q Consensus 201 n~~lvGe~GvGKtaive~la~~i~~~~vp~~l~~~~i----~~ld~~~l~ag~~~rg~~e~r~~~i~~~~~~~~~~~ilf 276 (853)
T Consensus 63 GlYl~G~VGrGKTmLMDlFy~~lp~~------~K~R~HFh~FM~~vH~~l~--~~~~~-~dpl~~va~~l~~~--~~lLC 131 (361)
T pfam03969 63 GLYLWGGVGRGKTHLMDSFFESLPGE------RKRRTHFHRFMFRVHDELT--TLQGG-DDPLPIAADRFANE--ARLLC 131 (361)
T ss_pred EEEEECCCCCCHHHHHHHHHHHCCCC------CCCCCCHHHHHHHHHHHHH--HHHCC-CCCHHHHHHHHHHC--CCEEE
T ss_conf 68988998886999999999867753------4445667899999999999--97667-76389999999725--87799
Q ss_pred ECCHHHH-CCCCCCCCCCCHHHHHHHHHCCCCEEEEE
Q ss_conf 6362773-02666554335888876531246604899
Q gi|254780877|r 277 IDELHVL-VGAGKTDGAMDASNLLKPSLARGELHCIG 312 (853)
Q Consensus 277 ide~h~~-~gaG~~~g~~Daan~LKP~LarG~l~~Ig 312 (853)
T Consensus 132 fDEFqV~DIa-----DAMIL~rLf~~Lf~~gv-vlV~ 162 (361)
T pfam03969 132 FDEFEVDDIG-----DAMILGRLFEALFARGV-SLVA 162 (361)
T ss_pred EEEEEECCHH-----HHHHHHHHHHHHHHCCC-EEEE
T ss_conf 7635616788-----89999999999997797-8998