HHsearch alignment for GI: 254780877 and conserved domain: pfam05673
>pfam05673 DUF815 Protein of unknown function (DUF815). This family consists of several bacterial proteins of unknown function.
Probab=98.39 E-value=8.3e-05 Score=58.02 Aligned_cols=189 Identities=24% Similarity=0.407 Sum_probs=105.0
Q ss_pred HHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCHHH
Q ss_conf 67459489999999999874101236566512898726786168899999998723776530022447740345320130
Q gi|254780877|r 568 KSVIGQSAAVESVSNALRRFRAGLQDPQRPMGSFMFLGPTGVGKTELVKSLARLLFDDENSMIRIDMSEYMEKHSVSRLI 647 (853)
Q Consensus 568 ~~v~gq~~ai~~v~~~~~~~~~gl~~~~~p~~~flf~GptGvGKTelak~la~~lf~~~~~lir~dMsey~e~~~vs~Li 647 (853)
T Consensus 28 ~~L~Gie~Qk~~l~~NT~~F~~G~-----pAnnvLLwG~RGtGKSSlVKall~~~~~~gLrlIEv~k~~L~~L------- 95 (248)
T pfam05673 28 DDLVGIDRQKEALLRNTEQFLAGL-----PANNVLLWGARGTGKSSLVKALLNEYADQGLRLIEVDKDDLGDL------- 95 (248)
T ss_pred HHHCCHHHHHHHHHHHHHHHHCCC-----CCCCEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEECHHHHCCH-------
T ss_conf 893493999999999999998089-----86136767689898889999999986314956999878887219-------
Q ss_pred CCCCHHCCCCCCCCCCHHHHCCCCC-EEEEHHHH-HCCHHHHHHHHHHHHCCEEECCCCCEEECCCCEEEECCCHHHHHH
Q ss_conf 4771120356677421132215641-02202144-149899999999840457887999778303315595485126876
Q gi|254780877|r 648 GSPPGYVGYEEGGALTEAVRRHPYQ-VVLFDEIE-KAHSDVHNILLQVLDDGRLTDSQGRTVDFRNTLIIMTSNLGAEYL 725 (853)
Q Consensus 648 GappGYvG~~~gg~Lte~vr~~P~s-Vil~DEiE-Kah~~v~~~llqild~G~ltd~~G~~v~f~n~iii~TsN~G~~~~ 725 (853)
T Consensus 96 ------------p~i~~~l~~~~~kFIiF~DDLSFe~~d~~yk~LKs~LeG~l-------~~~p~NvliYaTSNR--RHL 154 (248)
T pfam05673 96 ------------PDIVDLLRGRPYRFILFCDDLSFEEGESSYKALKSVLEGGL-------EARPDNVLIYATSNR--RHL 154 (248)
T ss_pred ------------HHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCC-------CCCCCEEEEEEECCC--HHC
T ss_conf ------------99999996499757999635576789736999999965764-------468873899984270--003
Q ss_pred HCC-----H--HHH--HHHHHHHHHHHCCHHHHCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEE---CHH
Q ss_conf 403-----2--679--9999999986288577266681586288998999999999999999999857989999---889
Q gi|254780877|r 726 IED-----G--DSV--HDKVMGIVRSAFKPEFLNRLDEIILFEKLRKEDMAKIVRIQLGRVLSLIKERNISMDF---DDQ 793 (853)
Q Consensus 726 ~~~-----~--~~~--~~~~~~~l~~~f~peflnRid~iv~F~~l~~~~~~~i~~~~l~~l~~~l~~~~i~l~~---~~~ 793 (853)
T Consensus 155 i~e~~~d~~~~~ei~~~d~~eEk------lSLsDRFGL~l~F~~~~q~~YL~IV~~~~~~-------~~~~~~~e~l~~~ 221 (248)
T pfam05673 155 IPEYMSDNEGDGEIHPGDAVEEK------LSLSDRFGLWLGFHPFDQDEYLAIVRGYAAR-------LGLPLDEEELRRE 221 (248)
T ss_pred CCHHHCCCCCCCCCCCCHHHHHH------HHHHHHCCEEEEECCCCHHHHHHHHHHHHHH-------CCCCCCHHHHHHH
T ss_conf 63332347774436725577745------3489867717850799999999999999998-------2999998999999
Q ss_pred HHHHHHHCC
Q ss_conf 999999708
Q gi|254780877|r 794 VIDWLSCRG 802 (853)
Q Consensus 794 ~~~~l~~~~ 802 (853)
T Consensus 222 Al~wa~~rg 230 (248)
T pfam05673 222 ALQWALTRG 230 (248)
T ss_pred HHHHHHHCC
T ss_conf 999999838