HHsearch alignment for GI: 254780877 and conserved domain: smart00763

>smart00763 AAA_PrkA PrkA AAA domain. This is a family of PrkA bacterial and archaeal serine kinases approximately 630 residues long. This is the N-terminal AAA domain.
Probab=97.92  E-value=0.00048  Score=51.81  Aligned_cols=107  Identities=19%  Similarity=0.207  Sum_probs=66.8

Q ss_pred             CEEEEHHHHHCCHHHHHHHHHHHHCCEEE-CCCCCEEECCCCEEEECCCHHHHHHHCCHHHHHHHHHHHHH-HHCCHHHH
Q ss_conf             10220214414989999999984045788-79997783033155954851268764032679999999998-62885772
Q gi|254780877|r  672 QVVLFDEIEKAHSDVHNILLQVLDDGRLT-DSQGRTVDFRNTLIIMTSNLGAEYLIEDGDSVHDKVMGIVR-SAFKPEFL  749 (853)
Q Consensus       672 sVil~DEiEKah~~v~~~llqild~G~lt-d~~G~~v~f~n~iii~TsN~G~~~~~~~~~~~~~~~~~~l~-~~f~pefl  749 (853)
T Consensus       238 Gi~ef~E~~K~~~~~L~~LL~~tqE~~vk~~~~~~~~~~d-~viia~sNe-~E~-------------~~f~~~~~~ea~~  302 (361)
T smart00763      238 GILEFVEMFKADIKFLHPLLTATQEGNIKGTGGFAMIPID-GLIIAHSNE-SEW-------------QRFKSNKKNEALL  302 (361)
T ss_pred             CCEEHHHHHHCCHHHHHHHHCCCCCCEECCCCCCCCCCCC-EEEEECCCH-HHH-------------HHHHCCCCCHHHH
T ss_conf             6000487751759999998420103604178865653245-158824985-999-------------8764484105555


Q ss_pred             CCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHH
Q ss_conf             66681586288998999999999999999999857989999889999999
Q gi|254780877|r  750 NRLDEIILFEKLRKEDMAKIVRIQLGRVLSLIKERNISMDFDDQVIDWLS  799 (853)
Q Consensus       750 nRid~iv~F~~l~~~~~~~i~~~~l~~l~~~l~~~~i~l~~~~~~~~~l~  799 (853)
T Consensus       303 dR~~~i~vPY~l~~~~E~kIY~k~l~~~------~~~~~h~aPhtl~~aa  346 (361)
T smart00763      303 DRIIKVKVPYCLRVSEEAQIYEKLLRNS------DLTEAHIAPHTLEMAA  346 (361)
T ss_pred             CCEEEEECCCCCCHHHHHHHHHHHHCCC------CCCCCCCCCCHHHHHH
T ss_conf             0279986874167388999999995656------5668772986899999