HHsearch alignment for GI: 254780877 and conserved domain: smart00763
>smart00763 AAA_PrkA PrkA AAA domain. This is a family of PrkA bacterial and archaeal serine kinases approximately 630 residues long. This is the N-terminal AAA domain.
Probab=97.92 E-value=0.00048 Score=51.81 Aligned_cols=107 Identities=19% Similarity=0.207 Sum_probs=66.8
Q ss_pred CEEEEHHHHHCCHHHHHHHHHHHHCCEEE-CCCCCEEECCCCEEEECCCHHHHHHHCCHHHHHHHHHHHHH-HHCCHHHH
Q ss_conf 10220214414989999999984045788-79997783033155954851268764032679999999998-62885772
Q gi|254780877|r 672 QVVLFDEIEKAHSDVHNILLQVLDDGRLT-DSQGRTVDFRNTLIIMTSNLGAEYLIEDGDSVHDKVMGIVR-SAFKPEFL 749 (853)
Q Consensus 672 sVil~DEiEKah~~v~~~llqild~G~lt-d~~G~~v~f~n~iii~TsN~G~~~~~~~~~~~~~~~~~~l~-~~f~pefl 749 (853)
T Consensus 238 Gi~ef~E~~K~~~~~L~~LL~~tqE~~vk~~~~~~~~~~d-~viia~sNe-~E~-------------~~f~~~~~~ea~~ 302 (361)
T smart00763 238 GILEFVEMFKADIKFLHPLLTATQEGNIKGTGGFAMIPID-GLIIAHSNE-SEW-------------QRFKSNKKNEALL 302 (361)
T ss_pred CCEEHHHHHHCCHHHHHHHHCCCCCCEECCCCCCCCCCCC-EEEEECCCH-HHH-------------HHHHCCCCCHHHH
T ss_conf 6000487751759999998420103604178865653245-158824985-999-------------8764484105555
Q ss_pred CCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHH
Q ss_conf 66681586288998999999999999999999857989999889999999
Q gi|254780877|r 750 NRLDEIILFEKLRKEDMAKIVRIQLGRVLSLIKERNISMDFDDQVIDWLS 799 (853)
Q Consensus 750 nRid~iv~F~~l~~~~~~~i~~~~l~~l~~~l~~~~i~l~~~~~~~~~l~ 799 (853)
T Consensus 303 dR~~~i~vPY~l~~~~E~kIY~k~l~~~------~~~~~h~aPhtl~~aa 346 (361)
T smart00763 303 DRIIKVKVPYCLRVSEEAQIYEKLLRNS------DLTEAHIAPHTLEMAA 346 (361)
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHCCC------CCCCCCCCCCHHHHHH
T ss_conf 0279986874167388999999995656------5668772986899999