>gnl|CDD|163223 TIGR03346, chaperone_ClpB, ATP-dependent chaperone ClpB. Members of this protein family are the bacterial ATP-dependent chaperone ClpB. This protein belongs to the AAA family, ATPases associated with various cellular activities (pfam00004). This molecular chaperone does not act as a protease, but rather serves to disaggregate misfolded and aggregated proteins. Length = 852

Score = 1319 bits (3416), Expect = 0.0 Identities = 519/844 (61%), Positives = 656/844 (77%), Gaps = 7/844 (0%) Query: 14 LQSAQTYALAQGHQNLVPEHVLHIFLEDEQGAVYSLIQCSGGDIAQLKDYNQTVLSKIPK 73 LQ+AQ+ AL + HQ + PEH+L L+ E G L+Q +G ++ L+ + L K+PK Sbjct: 9 LQAAQSLALGRDHQQIEPEHLLKALLDQEGGLARRLLQKAGVNVGALRQALEKELEKLPK 68 Query: 74 VTGGGAQVYLSQPLAVILSKSEEIAKKSGDSFVTAEKFLLAMVMETGGIGESLKKCGLKF 133 V+G G QVYLS L +L+ +E++A+K GD F+++E LLA++ + G +G+ LK+ G Sbjct: 69 VSGPGGQVYLSPELNRLLNLAEKLAQKRGDEFISSEHLLLALLDDKGTLGKLLKEAGATA 128 Query: 134 SRLEESIKKLRKGRVADSVNAEQGFDALKKYCRDLTEEARNGKLDPVIGRDDEMRRAIQV 193 LE +I +R G+ S NAE ++AL+KY RDLTE AR GKLDPVIGRD+E+RR IQV Sbjct: 129 DALEAAINAVRGGQKVTSANAEDQYEALEKYARDLTERAREGKLDPVIGRDEEIRRTIQV 188 Query: 194 LSRRTKNNPVLIGDPGVGKTAIIEGLASRIINGDIPESLKGKRLMALDMGALIAGAKFRG 253 LSRRTKNNPVLIG+PGVGKTAI+EGLA RI+NGD+PESLK KRL+ALDMGALIAGAK+RG Sbjct: 189 LSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGDVPESLKNKRLLALDMGALIAGAKYRG 248 Query: 254 EFEERLKSLLCEIRSEDGEIILFIDELHVLVGAGKTDGAMDASNLLKPSLARGELHCIGA 313 EFEERLK++L E+ +G+IILFIDELH LVGAGK +GAMDA N+LKP+LARGELHCIGA Sbjct: 249 EFEERLKAVLNEVTKSEGQIILFIDELHTLVGAGKAEGAMDAGNMLKPALARGELHCIGA 308 Query: 314 TTLDEYRKYIEKDPALARRFQSLLVGEPTVTDTISILRGLKERYEQHHKVRISDSALVSA 373 TTLDEYRKYIEKD AL RRFQ + V EPTV DTISILRGLKERYE HH VRI+D A+V+A Sbjct: 309 TTLDEYRKYIEKDAALERRFQPVFVDEPTVEDTISILRGLKERYEVHHGVRITDPAIVAA 368 Query: 374 AVLSNRYITDRFLPDKAIDLMDEASARVRMQIDTKPEVLDELDRRIICLKIEKEALKKEK 433 A LS+RYITDRFLPDKAIDL+DEA+AR+RM+ID+KPE LDELDRRII L+IE+EALKKEK Sbjct: 369 ATLSHRYITDRFLPDKAIDLIDEAAARIRMEIDSKPEELDELDRRIIQLEIEREALKKEK 428 Query: 434 DSFSKGRLIELEKELSSLEEKSHSLTLRWQEGQRKILYVADLKKRLESMRNELAIAQRQG 493 D SK RL +LEKEL+ LEE+ L +W+ + I + +K+ +E +R EL A+R+G Sbjct: 429 DEASKERLEDLEKELAELEEEYADLEEQWKAEKAAIQGIQQIKEEIEQVRLELEQAEREG 488 Query: 494 HFERAGELAYGLIPKTEKELDEAEKADS--TAEDMVQEVVTSDNIANIVSRWTGIPVDKM 551 +A EL YG +P+ EK L AE T +++E VT++ IA +VSRWTGIPV KM Sbjct: 489 DLAKAAELQYGKLPELEKRLQAAEAKLGEETKPRLLREEVTAEEIAEVVSRWTGIPVSKM 548 Query: 552 LESDREKFLRIETEISKSVIGQSAAVESVSNALRRFRAGLQDPQRPMGSFMFLGPTGVGK 611 LE +REK L +E + + V+GQ AVE+VS+A+RR RAGL DP RP+GSF+FLGPTGVGK Sbjct: 549 LEGEREKLLHMEEVLHERVVGQDEAVEAVSDAIRRSRAGLSDPNRPIGSFLFLGPTGVGK 608 Query: 612 TELVKSLARLLFDDENSMIRIDMSEYMEKHSVSRLIGSPPGYVGYEEGGALTEAVRRHPY 671 TEL K+LA LFDDE++M+RIDMSEYMEKHSV+RLIG+PPGYVGYEEGG LTEAVRR PY Sbjct: 609 TELAKALAEFLFDDEDAMVRIDMSEYMEKHSVARLIGAPPGYVGYEEGGQLTEAVRRKPY 668 Query: 672 QVVLFDEIEKAHSDVHNILLQVLDDGRLTDSQGRTVDFRNTLIIMTSNLGAEYLIEDGD- 730 VVLFDE+EKAH DV N+LLQVLDDGRLTD QGRTVDFRNT+IIMTSNLG++++ E Sbjct: 669 SVVLFDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGSQFIQELAGG 728 Query: 731 ----SVHDKVMGIVRSAFKPEFLNRLDEIILFEKLRKEDMAKIVRIQLGRVLSLIKERNI 786 + + VM ++R+ F+PEFLNR+DEI++F L +E +A+IV IQLGR+ + ER I Sbjct: 729 DDYEEMREAVMEVLRAHFRPEFLNRIDEIVVFHPLGREQIARIVEIQLGRLRKRLAERKI 788 Query: 787 SMDFDDQVIDWLSCRGYDPSYGARPLKRVIQRYIQNPLAERVLSQTISDGDSIEVFVDDD 846 +++ D +D+L+ GYDP YGARPLKR IQR I+NPLA+++L+ ++DGD+I V V+ Sbjct: 789 TLELSDAALDFLAEAGYDPVYGARPLKRAIQREIENPLAKKILAGEVADGDTIVVDVEGG 848 Query: 847 NLNF 850 L F Sbjct: 849 RLVF 852

RPSBLAST alignment for GI: 254780877 and conserved domain: TIGR03346