RPSBLAST alignment for GI: 254780877 and conserved domain: KOG1051

>gnl|CDD|36269 KOG1051, KOG1051, KOG1051, Chaperone HSP104 and related ATP-dependent Clp proteases [Posttranslational modification, protein turnover, chaperones]. Length = 898
 Score =  691 bits (1785), Expect = 0.0
 Identities = 373/859 (43%), Positives = 502/859 (58%), Gaps = 47/859 (5%)

Query: 12  NVLQSAQTYALAQGHQNLVPEHVLHIFLEDEQGAVYSLIQCSGGDIAQLKDYNQTV---L 68
            VL+ A T A  +GH  + P HV    L    G +      S     Q +         L
Sbjct: 18  TVLKQAVTEARRRGHAQVTPLHVASTLLSSPTGILRRACIKSHP--LQCRALELCFNVSL 75

Query: 69  SKIPKVTGGGAQVYLSQPLAVILSKSEEIAKKSGDSFVTAE-KFLLAMVMETGGIGESLK 127
           +++P   G      L   L    +      ++     V  E + L+  +++   +   ++
Sbjct: 76  NRLPTSYGPPVSNALMAALKRAQAHQRRGCEEQQQQAVKVELEQLILSILDDPSVSRVMR 135

Query: 128 KCGLKFSRLEESIKKLRKGRVADSVNAEQGFDALKKYCRDLTEEARNGKLDPVIGR-DDE 186
           + G   S ++ ++++      + S         L+ Y  DLT  AR GKLDPVIGR D+E
Sbjct: 136 EAGFSSSAVKSAVEQPVGQFRSPSRGPLWPLLFLENYGTDLTPRARQGKLDPVIGRHDEE 195

Query: 187 MRRAIQVLSRRTKNNPVLIGDPGVGKTAIIEGLASRIINGDIPESLKGKRLMALDMGALI 246
           +RR I++LSR+TKNNPVL+G+PGVGKTAI+EGLA RI  GD+PE+LK K+L+ALD G+L+
Sbjct: 196 IRRVIEILSRKTKNNPVLVGEPGVGKTAIVEGLAQRIATGDVPETLKDKKLIALDFGSLV 255

Query: 247 AGAKFRGEFEERLKSLLCEIRSEDGEIILFIDELHVLVGAGKTDGAMDASNLLKPSLARG 306
           AGAK RGEFEERLK LL E+ S  G +ILF+ ELH LVG+G   GA+DA+NLLKP LARG
Sbjct: 256 AGAKRRGEFEERLKELLKEVESGGGGVILFLGELHWLVGSGSNYGAIDAANLLKPLLARG 315

Query: 307 ELHCIGATTLDEYRKYIEKDPALARRFQSLLVGEPTVTDTISILRGLKERYEQHHKVRIS 366
            L CIGATTL+ YRK IEKDPAL RR+Q +LV  P+V +   IL GL ERYE HH VRIS
Sbjct: 316 GLWCIGATTLETYRKCIEKDPALERRWQLVLVPIPSVENLSLILPGLSERYEVHHGVRIS 375

Query: 367 DSALVSAAVLSNRYITDRFLPDKAIDLMDEASARVRMQIDTKPEVLDELDRRIICLKIEK 426
           D +L SAA LS RYIT  FLPD AIDL DEA+A V+ Q ++ P  L  L+R  I L+ E 
Sbjct: 376 DESLFSAAQLSARYITLSFLPDCAIDLEDEAAALVKSQAESLPPWLQNLERVDIKLQDEI 435

Query: 427 EALKKEKDSFSKGRLIELEKELSSLEEKSHSLTLRWQEGQRKILYVADLKKRLESMRNEL 486
             L+K+ +     R     + L+  +     L+      +  I  +   K  L+     L
Sbjct: 436 SELQKKWNQALHKRPS--LESLAPSKPTQQPLSASVDSERSVIEELKLKKNSLDRNSL-L 492

Query: 487 AIAQRQGHFERAGELAYGLIPKTEKELDEAEKADSTAEDMVQEVVTSDNIANIVSRWTGI 546
           A A R   + R  +L YG IP    E                      +I+ +VSRWTGI
Sbjct: 493 AKAHRPNDYTRETDLRYGRIPDELSEKSN------------DNQGGESDISEVVSRWTGI 540

Query: 547 PVDKMLESDREKFLRIETEISKSVIGQSAAVESVSNALRRFRAGLQDPQRPMGSFMFLGP 606
           PVD++ E++ E+  ++E  + + VIGQ  AV +++ A+RR RAGL+DP  P   F+FLGP
Sbjct: 541 PVDRLAEAEAERLKKLEERLHERVIGQDEAVAAIAAAIRRSRAGLKDPN-PDAWFLFLGP 599

Query: 607 TGVGKTELVKSLARLLFDDENSMIRIDMSEYMEKHSVSRLIGSPPGYVGYEEGGALTEAV 666
            GVGKTEL K+LA  +F  E + IR+DMSE+ E   VS+LIGSPPGYVG EEGG LTEAV
Sbjct: 600 DGVGKTELAKALAEYVFGSEENFIRLDMSEFQE---VSKLIGSPPGYVGKEEGGQLTEAV 656

Query: 667 RRHPYQVVLFDEIEKAHSDVHNILLQVLDDGRLTDSQGRTVDFRNTLIIMTSNLGAEYLI 726
           +R PY VVLF+EIEKAH DV NILLQ+LD GRLTDS GR VDF+N + IMTSN+G+  + 
Sbjct: 657 KRRPYSVVLFEEIEKAHPDVLNILLQLLDRGRLTDSHGREVDFKNAIFIMTSNVGSSAIA 716

Query: 727 EDG--------------------DSVHDKVMGIVRSAFKPEFLNRLDEIILFEKLRKEDM 766
            D                       V D V    +  F+ EFLNR+DE+ L   L ++++
Sbjct: 717 NDASLEEKLLDMDEKRGSYRLKKVQVSDAVRIYNKQFFRKEFLNRIDELDLNLPLDRDEL 776

Query: 767 AKIVRIQLGRVLSLIKERNISMDFDDQVIDWLSCRGYDPSYGARPLKRVIQRYIQNPLAE 826
            +IV  QL  +   ++ER + +   D+V D +  +GYD  YGARP+KR I+   +N LAE
Sbjct: 777 IEIVNKQLTEIEKRLEERELLLLVTDRVDDKVLFKGYDFDYGARPIKRSIEERFENRLAE 836

Query: 827 RVLSQTISDGDSIEVFVDD 845
            +L + + DG +  + V D
Sbjct: 837 ALLGE-VEDGLTERILVAD 854