HHsearch alignment for GI: 254780879 and conserved domain: PRK06347

>PRK06347 autolysin; Reviewed.
Probab=97.03  E-value=0.0011  Score=44.66  Aligned_cols=121  Identities=8%  Similarity=0.070  Sum_probs=66.0

Q ss_pred             CEEEEEECCCCCHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHCCCCCEEEEEECCCCCCCEEEEEEECCCCCEEEEEEEC
Q ss_conf             01368841797089999974999899999999854015610169988899997278886405899971688348999842
Q gi|254780879|r  275 ADDLIPIQHNTTIFDAMVHAGYSNGDSAKIAKALKNEVRVDQLTKDEILRIGVVQKDDKFTIVRFSIYHKQKHLLTIALN  354 (652)
Q Consensus       275 ~e~~v~VK~GDTL~~IL~r~Gvs~~ei~~i~~al~~~~~~~~Lr~Gq~L~I~~~~~~~~~~~~r~si~~~~~~~~~va~~  354 (652)
T Consensus       329 as~tYTV~sGDTl~~IA~KyGtSV~~L~sw----N~is~-~~IY~GQ~L~V~~~s~stnt~~s-----~~nt---~~n~n  395 (593)
T PRK06347        329 NAKIYTVVKGDSLWRIANNHKVTVANLKAW----NNLKS-DFIYPGQKLKVSAGSTTSNTNTS-----KPST---GTSTS  395 (593)
T ss_pred             CCCEEEEECCCCHHHHHHCCCCCHHHHHHH----HCCCC-CCEECCCEEEECCCCCCCCCCCC-----CCCC---CCCCC
T ss_conf             564589844868888763155148777776----46567-84331767887467666666667-----7764---54445


Q ss_pred             CCCCEEECCCCCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHCCCCCEEEE
Q ss_conf             788432013332100000122111233454211025666887199989999999973011101210144540688
Q gi|254780879|r  355 DNNEYVLGVEPVKMDINHQMDYMRTSEESPNIYDGIWRATSFNGMNSNLVKLIMRTLASSVNLQEHLKPTDFLET  429 (652)
Q Consensus       355 d~g~fv~~~ep~~~~~~~~~~~~~~~~~~~~I~~SLy~aa~~~gip~~ii~~lv~i~a~dVDFqr~ir~GD~f~V  429 (652)
T Consensus       396 ---------------~~~tsstTsa~tYTVkSGDTLw~IA~K~g~SV~~LkswNnLs---sd~---IYpGQvLkV  449 (593)
T PRK06347        396 ---------------KPSTSTSTNAKVYTVVKGDSLWRIANNNKVTIANLKSWNNLK---SDF---IYPGQKLKV  449 (593)
T ss_pred             ---------------CCCCCCCCCCEEEEEECCCCHHHHHHHCCCCHHHHHHHCCCC---CCE---EEECCEEEE
T ss_conf             ---------------567765433127998228758877741595789975440666---766---863307998